BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011798
(477 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255569912|ref|XP_002525919.1| Protein pim1, putative [Ricinus communis]
gi|223534748|gb|EEF36439.1| Protein pim1, putative [Ricinus communis]
Length = 478
Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/471 (84%), Positives = 435/471 (92%)
Query: 1 MDINEIIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA 60
MDI+EIIGET N+P KSAIYVWGYNH+GQTGRKG+E++LRIPKQL PELFGCPAGA
Sbjct: 1 MDIDEIIGETTTRSMNLPTKSAIYVWGYNHNGQTGRKGKEQELRIPKQLSPELFGCPAGA 60
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
N+RWLDIACG EHTAAVASDG+LFTWGANEFGQLGDGTEEG+K+P+KVKQL++EFVKS+S
Sbjct: 61 NARWLDIACGREHTAAVASDGSLFTWGANEFGQLGDGTEEGKKYPKKVKQLETEFVKSVS 120
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVV 180
CGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSN+PRLF GAF NTIICQVSCG+VHVV
Sbjct: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNYPRLFSGAFALNTIICQVSCGAVHVV 180
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
ALSE GLLQAWGYNEYGQLGRGITCEGLQGPRVI YAKFLDEAPEL KIT+VSCGEYH+
Sbjct: 181 ALSEDGLLQAWGYNEYGQLGRGITCEGLQGPRVINAYAKFLDEAPELVKITRVSCGEYHT 240
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
AA+SE GEVYTWGLGS GQLGH SLQSG+KELLPRRVVALDGI I DVACGGVH+CA+T
Sbjct: 241 AAISEKGEVYTWGLGSTGQLGHTSLQSGNKELLPRRVVALDGILITDVACGGVHTCAVTQ 300
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
KGALYAWGGSQ GQLGLGPQT SFS IP++++++ RNIP LV P GVQLVACGHSHTL+
Sbjct: 301 KGALYAWGGSQFGQLGLGPQTGSFSFIPSDTESFLRNIPALVFPTGVQLVACGHSHTLIC 360
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSLKEL 420
+RDGRIHGWGYNSYGQAANEK+TYAWYPSPVDWCVGEVRKLAAGGGHSAVL DACSLKEL
Sbjct: 361 LRDGRIHGWGYNSYGQAANEKTTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKEL 420
Query: 421 CEFRLAESVTLSNASEIEDVASRTGSEALARLCERLREHSLHGDEFDCDDD 471
CEFRLA+SVTLSNASEIEDVASRTG++ALARLC RLREH L G E D +DD
Sbjct: 421 CEFRLADSVTLSNASEIEDVASRTGADALARLCGRLREHLLDGSELDYEDD 471
>gi|224120790|ref|XP_002330952.1| predicted protein [Populus trichocarpa]
gi|222873146|gb|EEF10277.1| predicted protein [Populus trichocarpa]
Length = 462
Score = 798 bits (2060), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/461 (86%), Positives = 425/461 (92%), Gaps = 2/461 (0%)
Query: 1 MDINEIIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA 60
MDINEI+GET R V N P KSAIYVWGYN SGQTGRKG++ QLRIPKQLPPELFGCPAGA
Sbjct: 1 MDINEIVGETKRSV-NFPTKSAIYVWGYNQSGQTGRKGKDGQLRIPKQLPPELFGCPAGA 59
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
N+RWLDIACG EHTAAVASDG+LFTWGANEFGQLGDGTE+ RK+P+KVKQL++EFVKS+S
Sbjct: 60 NARWLDIACGREHTAAVASDGSLFTWGANEFGQLGDGTEDSRKYPKKVKQLETEFVKSVS 119
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVV 180
CGAHCTAAIAEPR+NDGTI SRLWVWGQNQGSN+PRLF GAF+PNTIICQVSCG+VHVV
Sbjct: 120 CGAHCTAAIAEPRQNDGTI-LSRLWVWGQNQGSNYPRLFCGAFSPNTIICQVSCGAVHVV 178
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
ALSE GLLQAWGYNEYGQLGRG TCEGLQG RVI YAKFLDEAPEL KITQVSCGEYH+
Sbjct: 179 ALSEDGLLQAWGYNEYGQLGRGFTCEGLQGARVINAYAKFLDEAPELVKITQVSCGEYHT 238
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
AA+SE GEVYTWGLG++GQLGH SLQSGDKELLPRRVVALDGIFIKDVACGGVH+CA T
Sbjct: 239 AAISEKGEVYTWGLGNMGQLGHTSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCAATQ 298
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
KGALYAWGG QAGQLGLGPQT SFS IP+ES+++ RNIP LVVP VQ VACGHSHTLV
Sbjct: 299 KGALYAWGGGQAGQLGLGPQTGSFSFIPSESESFLRNIPALVVPTDVQHVACGHSHTLVS 358
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSLKEL 420
MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL DACSLKEL
Sbjct: 359 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKEL 418
Query: 421 CEFRLAESVTLSNASEIEDVASRTGSEALARLCERLREHSL 461
CEFRLAE+VTLSNASEIEDVASRTG++ALARLC RLR S
Sbjct: 419 CEFRLAENVTLSNASEIEDVASRTGADALARLCGRLRYSSF 459
>gi|225451821|ref|XP_002281545.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
vinifera]
gi|298204453|emb|CBI16933.3| unnamed protein product [Vitis vinifera]
Length = 478
Score = 781 bits (2017), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/462 (84%), Positives = 420/462 (90%), Gaps = 2/462 (0%)
Query: 1 MDINEIIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA 60
MDI +I GE+ RPV NIP KSAIYVWGYN GQTGR G+E QLRIPKQLPPELFGCPAGA
Sbjct: 1 MDIGDIFGES-RPV-NIPTKSAIYVWGYNQRGQTGRNGKELQLRIPKQLPPELFGCPAGA 58
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
NSRWL IACG EHTAAVASDG+LFTWGAN+FGQLGDGTE+GRKHP+KVKQLQ+EFVKSIS
Sbjct: 59 NSRWLSIACGREHTAAVASDGSLFTWGANDFGQLGDGTEDGRKHPKKVKQLQTEFVKSIS 118
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVV 180
CGAHCTAAIAEPRE +G +STSRLWVWGQNQGSN+P LFWGAFTPNTII QVSCG+VH V
Sbjct: 119 CGAHCTAAIAEPREKNGIVSTSRLWVWGQNQGSNYPHLFWGAFTPNTIIRQVSCGAVHTV 178
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
ALSE GL+QAWGYNEYGQLGRGITCEGLQG RVI Y+KF +EAPEL KITQVSCGEYH+
Sbjct: 179 ALSEEGLVQAWGYNEYGQLGRGITCEGLQGARVINAYSKFFNEAPELVKITQVSCGEYHT 238
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
AA+SENGEVYTWGLG++GQLGHCSLQ GDKEL+PRRVVALDGI KD+ACGGVH+CALTS
Sbjct: 239 AAISENGEVYTWGLGNMGQLGHCSLQYGDKELVPRRVVALDGISTKDIACGGVHTCALTS 298
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
KGALYAWGG QAGQLGLGPQ+ FS NESD RNIP+LVVP GVQL+ACGHSHTL+
Sbjct: 299 KGALYAWGGGQAGQLGLGPQSGLFSCNLNESDMLLRNIPVLVVPTGVQLIACGHSHTLIS 358
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSLKEL 420
M+DGRI GWGYNSYGQAANEKSTYAWYPSP+DWCVGEVR+LAAGGGHSAVL DACSLKEL
Sbjct: 359 MKDGRICGWGYNSYGQAANEKSTYAWYPSPIDWCVGEVRQLAAGGGHSAVLTDACSLKEL 418
Query: 421 CEFRLAESVTLSNASEIEDVASRTGSEALARLCERLREHSLH 462
CEFRLA+ VT SNASEIEDVASRTGS+ALARLCERLREH H
Sbjct: 419 CEFRLADCVTPSNASEIEDVASRTGSDALARLCERLREHLPH 460
>gi|356568831|ref|XP_003552611.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Glycine max]
Length = 474
Score = 776 bits (2003), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/467 (79%), Positives = 415/467 (88%), Gaps = 2/467 (0%)
Query: 1 MDINEIIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA 60
MDI+ I G T RPV ++P KSAIYVWGYN SGQTGRKG+E QLRIPKQLPPELFGCPAG
Sbjct: 1 MDIDAIFG-TIRPV-SVPRKSAIYVWGYNQSGQTGRKGKEDQLRIPKQLPPELFGCPAGT 58
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
N+RWLD+ACG EHTAA+ASDG+LFTWGAN+FGQLGDGTEE RK PEKVKQL+SEFVKS+S
Sbjct: 59 NARWLDVACGREHTAAIASDGSLFTWGANDFGQLGDGTEERRKLPEKVKQLESEFVKSVS 118
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVV 180
CGAHC+A IAEP ENDGTIST RLWVWGQNQGSN PRLFWGAF PNTII +VSCG+VHVV
Sbjct: 119 CGAHCSACIAEPHENDGTISTRRLWVWGQNQGSNLPRLFWGAFKPNTIIREVSCGAVHVV 178
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
ALSE GLLQAWGYNEYGQLGRG+TCEGLQG +I YAKFLDEAPEL KI +VSCGEYH+
Sbjct: 179 ALSEEGLLQAWGYNEYGQLGRGVTCEGLQGACIISSYAKFLDEAPELVKIAKVSCGEYHT 238
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
A +S+ GEVYTWGLG++GQLGH SLQ GDKELLPRRVV LDGIFIKDVACGGVH+C++T
Sbjct: 239 AVISDKGEVYTWGLGNMGQLGHSSLQYGDKELLPRRVVTLDGIFIKDVACGGVHTCSVTQ 298
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
GALYAWGG ++GQLGLGPQT FS + N+S T+FRNIP+LVVP GVQLVACG+SHTL+
Sbjct: 299 GGALYAWGGGRSGQLGLGPQTGLFSCVANDSQTFFRNIPVLVVPKGVQLVACGYSHTLIS 358
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSLKEL 420
M DGRIHGWGYN+YGQAANEK TYAWYPSP+DWCVGEVRKLAAGGGHSAVL DA SLKEL
Sbjct: 359 MSDGRIHGWGYNNYGQAANEKCTYAWYPSPIDWCVGEVRKLAAGGGHSAVLTDAYSLKEL 418
Query: 421 CEFRLAESVTLSNASEIEDVASRTGSEALARLCERLREHSLHGDEFD 467
CEF LA+S+TLSNA+++ED+A RTGS+ALARLC RLRE+ L G +
Sbjct: 419 CEFVLADSMTLSNAAKVEDIAYRTGSDALARLCGRLREYMLAGGALE 465
>gi|147791382|emb|CAN65617.1| hypothetical protein VITISV_032298 [Vitis vinifera]
Length = 461
Score = 775 bits (2001), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/457 (84%), Positives = 418/457 (91%), Gaps = 2/457 (0%)
Query: 1 MDINEIIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA 60
MDI +I GE+ RPV NIP KSAIYVWGYN GQTGR G+E QLRIPKQLPPELFGCPAGA
Sbjct: 1 MDIGDIFGES-RPV-NIPTKSAIYVWGYNQRGQTGRNGKELQLRIPKQLPPELFGCPAGA 58
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
NSRWL IACG EHTAAVASDG+LFTWGAN+FGQLGDGTE+GRKHP+KVKQLQ+EFVKS S
Sbjct: 59 NSRWLSIACGREHTAAVASDGSLFTWGANDFGQLGDGTEDGRKHPKKVKQLQTEFVKSXS 118
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVV 180
CGAHCTAAIAEPRE +G +STSRLWVWGQNQGSN+P LFWGAFTPNTII QVSCG+VH V
Sbjct: 119 CGAHCTAAIAEPREKNGIVSTSRLWVWGQNQGSNYPHLFWGAFTPNTIIRQVSCGAVHTV 178
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
ALSE GL+QAWGYNEYGQLGRGITCEGLQG RVI Y+KFL+EAPEL KITQVSCGEYH+
Sbjct: 179 ALSEEGLVQAWGYNEYGQLGRGITCEGLQGARVINAYSKFLNEAPELVKITQVSCGEYHT 238
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
AA+SENGEVYTWGLG++GQLGHCSLQ GDKEL+PRRVVALDGI IKD+ACGGVH+CALTS
Sbjct: 239 AAISENGEVYTWGLGNMGQLGHCSLQYGDKELVPRRVVALDGISIKDIACGGVHTCALTS 298
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
KGALYAWGG QAGQLGLGPQ+ FS NESD +NIP+LVVP GVQL+ACGHSHTL+
Sbjct: 299 KGALYAWGGGQAGQLGLGPQSGLFSCNLNESDMLLQNIPVLVVPTGVQLIACGHSHTLIS 358
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSLKEL 420
M+DGRI GWGYNSYGQAANEKSTYAWYPSP+DWCVGEVR+LAAGGGHSAVL DACSLKEL
Sbjct: 359 MKDGRICGWGYNSYGQAANEKSTYAWYPSPIDWCVGEVRQLAAGGGHSAVLTDACSLKEL 418
Query: 421 CEFRLAESVTLSNASEIEDVASRTGSEALARLCERLR 457
CEFRLA+ VT SNASEIEDVASRTGS+ALARLCERLR
Sbjct: 419 CEFRLADCVTPSNASEIEDVASRTGSDALARLCERLR 455
>gi|357502467|ref|XP_003621522.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355496537|gb|AES77740.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 476
Score = 768 bits (1984), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/463 (80%), Positives = 415/463 (89%)
Query: 1 MDINEIIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA 60
MDI+ I+G T +IP KSAIYVWGYN SGQTGRK ++ QLRIPKQLPP+LFGCPAG
Sbjct: 1 MDIDAILGTTKPVAASIPRKSAIYVWGYNQSGQTGRKEKDDQLRIPKQLPPQLFGCPAGL 60
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
N+RWLDIACG EHTAA+ASDG LFTWGANEFGQLGDGTEE RKHP+KVKQL+SEFVKS++
Sbjct: 61 NTRWLDIACGREHTAAIASDGLLFTWGANEFGQLGDGTEERRKHPKKVKQLESEFVKSVA 120
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVV 180
CGAHC+A IAEPRENDGT+ST RLWVWGQNQGSN PRLFWGAF PNT I QVSCG+VHVV
Sbjct: 121 CGAHCSACIAEPRENDGTVSTGRLWVWGQNQGSNLPRLFWGAFEPNTTIKQVSCGAVHVV 180
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
ALSE GLLQAWGYNE GQLGRG+TCEGLQG R+I YAKFLDEAPEL KIT+VSCGEYH+
Sbjct: 181 ALSEDGLLQAWGYNEQGQLGRGVTCEGLQGARIISSYAKFLDEAPELVKITRVSCGEYHT 240
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
AA+S+ GEVYTWGLG++GQLGH SLQ GDKEL+PRRVV+LD IFIKD ACGGVH+CALT
Sbjct: 241 AAISDKGEVYTWGLGNMGQLGHTSLQYGDKELIPRRVVSLDSIFIKDAACGGVHTCALTQ 300
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+GALYAWGG Q+GQLGLGP T FS IPN+S T+FRNIP+LVVP GVQLVACGHSHTL+
Sbjct: 301 EGALYAWGGGQSGQLGLGPDTGLFSCIPNDSRTFFRNIPVLVVPKGVQLVACGHSHTLIC 360
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSLKEL 420
MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL DA SLKEL
Sbjct: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDAFSLKEL 420
Query: 421 CEFRLAESVTLSNASEIEDVASRTGSEALARLCERLREHSLHG 463
CEF LA+S+TLSNA+++ED+A RTGS+ALARLC RLRE+ L G
Sbjct: 421 CEFVLADSMTLSNAAKVEDIAYRTGSDALARLCGRLREYMLAG 463
>gi|356526548|ref|XP_003531879.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Glycine max]
Length = 474
Score = 761 bits (1966), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/467 (80%), Positives = 415/467 (88%), Gaps = 2/467 (0%)
Query: 1 MDINEIIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA 60
MDI+ I G T RPV ++P KSAIYVWGYN SGQTGRKG+E QLRIPKQLPPELFGCPAG
Sbjct: 1 MDIDAIFG-TIRPV-SVPRKSAIYVWGYNQSGQTGRKGKEDQLRIPKQLPPELFGCPAGT 58
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
N+ WLD+ACG EHTAA+ASDG+LFTWGAN+FGQLGDGTEE RKHPEKVKQL+SEFVKS+S
Sbjct: 59 NACWLDVACGREHTAAIASDGSLFTWGANDFGQLGDGTEERRKHPEKVKQLESEFVKSVS 118
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVV 180
CGAHC+A IAEPRENDG+IST RLWVWGQNQGSN PRLFWGAF PNTII +VSCG+VHVV
Sbjct: 119 CGAHCSACIAEPRENDGSISTRRLWVWGQNQGSNLPRLFWGAFKPNTIIREVSCGAVHVV 178
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
ALS+ GLLQAWGYNE GQLGRG+TCEGLQG +I YAKFLDEAPEL KI +VSCGEYH+
Sbjct: 179 ALSDEGLLQAWGYNECGQLGRGVTCEGLQGAHIISSYAKFLDEAPELVKIAKVSCGEYHT 238
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
AA+S+ GEVYTWGLG++GQLGH SLQ GDKELLPRRVV LDGIFIKDVACGGVH+CALT
Sbjct: 239 AAISDKGEVYTWGLGNMGQLGHSSLQYGDKELLPRRVVTLDGIFIKDVACGGVHTCALTQ 298
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
GALY WGG Q+GQLGLGPQT FS + N+S T+FRNIP+LVVP GVQLVACGHSHTL+
Sbjct: 299 GGALYTWGGGQSGQLGLGPQTGLFSCVANDSQTFFRNIPVLVVPKGVQLVACGHSHTLIS 358
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSLKEL 420
M DGRIHGWGYN+YGQAANEK TYAWYPSPVDWCVGEVRKLAAGGGHSAVL DACSLKEL
Sbjct: 359 MSDGRIHGWGYNNYGQAANEKCTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKEL 418
Query: 421 CEFRLAESVTLSNASEIEDVASRTGSEALARLCERLREHSLHGDEFD 467
CEF LA+S+TLSNA+++ED+A RTGS+AL RLC RLRE+ L G +
Sbjct: 419 CEFVLADSMTLSNAAKVEDIAYRTGSDALVRLCGRLREYMLAGGALE 465
>gi|449481391|ref|XP_004156169.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Cucumis sativus]
Length = 472
Score = 751 bits (1940), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/475 (78%), Positives = 416/475 (87%), Gaps = 4/475 (0%)
Query: 1 MDINEIIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA 60
MDI++I G T ++P KSAIYVWGYN SGQTGRKG++ QLR+P+QL P+LFGCP
Sbjct: 1 MDIDDIFGMTQNV--SLPRKSAIYVWGYNQSGQTGRKGKDHQLRVPRQLHPDLFGCPGEI 58
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
NSRWLDIACG EHTAAVASDG+LFTWGAN+FGQLGDGTEE K P+KV QLQ EFVKS+S
Sbjct: 59 NSRWLDIACGREHTAAVASDGSLFTWGANDFGQLGDGTEEKSKLPKKVNQLQGEFVKSVS 118
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVV 180
CGAHCTAAIAEPRENDGT+ST RLW+WGQNQGSNFPRLFWGAFTP TII QVSCG+VHVV
Sbjct: 119 CGAHCTAAIAEPRENDGTLSTRRLWIWGQNQGSNFPRLFWGAFTPQTIIRQVSCGAVHVV 178
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
ALS+ G LQAWGYNEYGQLGRG+T EGLQG R+I +AKFLDEAPEL IT+VSCGEYHS
Sbjct: 179 ALSDDGQLQAWGYNEYGQLGRGVTSEGLQGARIINAFAKFLDEAPELVTITKVSCGEYHS 238
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
AA+SENGEVYTWGLGS+GQLGHCSLQS DKEL+PRRVVALDGI +KD+ACGGVH+CA+T
Sbjct: 239 AAISENGEVYTWGLGSMGQLGHCSLQSADKELIPRRVVALDGICVKDIACGGVHTCAITQ 298
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
G+LYAWGG Q GQLG+GPQT FS I +S+T+ RN+P++VV +GVQ VACGHSHTLV
Sbjct: 299 NGSLYAWGGGQVGQLGVGPQTGFFSCIAGDSETFLRNLPVVVVSDGVQHVACGHSHTLVS 358
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSLKEL 420
+DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL DACSLKEL
Sbjct: 359 TKDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKEL 418
Query: 421 CEFRLAESVTLSNASEIEDVASRTGSEALARLCERLREHSLHGD-EFDCDDDTRN 474
CEFRLA++V NASEIEDVASRTGS+ALARLC RLRE L G EF+ +D+T N
Sbjct: 419 CEFRLADTVNSQNASEIEDVASRTGSDALARLCGRLRESVLDGRCEFE-EDETSN 472
>gi|449447436|ref|XP_004141474.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Cucumis sativus]
Length = 472
Score = 750 bits (1937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/475 (78%), Positives = 416/475 (87%), Gaps = 4/475 (0%)
Query: 1 MDINEIIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA 60
MDI++I G T ++P KSAIYVWGYN SGQTGRKG++ QLR+P+QL P+LFGCP
Sbjct: 1 MDIDDIFGMTQNV--SLPRKSAIYVWGYNQSGQTGRKGKDHQLRVPRQLHPDLFGCPGEI 58
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
NSRWLDIACG EHTAAVASDG+LFTWGAN+FGQLGDGTEE K P+KV QLQ EFVKS+S
Sbjct: 59 NSRWLDIACGREHTAAVASDGSLFTWGANDFGQLGDGTEEKSKLPKKVNQLQGEFVKSVS 118
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVV 180
CGAHCTAAIAEPRENDGT+ST RLW+WGQNQGSNFPRLFWGAFTP TII QVSCG+VHVV
Sbjct: 119 CGAHCTAAIAEPRENDGTLSTCRLWIWGQNQGSNFPRLFWGAFTPQTIIRQVSCGAVHVV 178
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
ALS+ G LQAWGYNEYGQLGRG+T EGLQG R+I +AKFLDEAPEL IT+VSCGEYHS
Sbjct: 179 ALSDDGQLQAWGYNEYGQLGRGVTSEGLQGARIINAFAKFLDEAPELVTITKVSCGEYHS 238
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
AA+SENGEVYTWGLGS+GQLGHCSLQS DKEL+PRRVVALDGI +KD+ACGGVH+CA+T
Sbjct: 239 AAISENGEVYTWGLGSMGQLGHCSLQSADKELIPRRVVALDGICVKDIACGGVHTCAITQ 298
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
G+LYAWGG Q GQLG+GPQT FS I +S+T+ RN+P++VV +GVQ VACGHSHTLV
Sbjct: 299 NGSLYAWGGGQVGQLGVGPQTGFFSCIAGDSETFLRNLPVVVVSDGVQHVACGHSHTLVS 358
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSLKEL 420
+DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL DACSLKEL
Sbjct: 359 TKDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKEL 418
Query: 421 CEFRLAESVTLSNASEIEDVASRTGSEALARLCERLREHSLHGD-EFDCDDDTRN 474
CEFRLA++V NASEIEDVASRTGS+ALARLC RLRE L G EF+ +D+T N
Sbjct: 419 CEFRLADTVNSQNASEIEDVASRTGSDALARLCGRLRESVLDGRCEFE-EDETSN 472
>gi|297828676|ref|XP_002882220.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297328060|gb|EFH58479.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 471
Score = 747 bits (1929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/464 (80%), Positives = 408/464 (87%), Gaps = 1/464 (0%)
Query: 1 MDINEIIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA 60
MDI EIIGE A P +IP KSAIYVWGYN SGQTGR G+E+ LRIPKQLPPELFGCPAGA
Sbjct: 1 MDIGEIIGEVA-PSVSIPTKSAIYVWGYNQSGQTGRNGQEKLLRIPKQLPPELFGCPAGA 59
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
NSRWLDI+CG EHTAAVASDG+LFTWGANE+GQLGDGTE GRKHP+KVKQLQSEFVK +S
Sbjct: 60 NSRWLDISCGREHTAAVASDGSLFTWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVS 119
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVV 180
CGA CTAAIAEPRENDGT+S SRLWVWGQNQGSN PRLF GAF T I QVSCG+ HVV
Sbjct: 120 CGAFCTAAIAEPRENDGTLSKSRLWVWGQNQGSNLPRLFSGAFPATTAIRQVSCGTAHVV 179
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
ALSE GLLQAWGYNE GQLGRG+TCEGLQ PRVI YAKFLDEAPEL KI QVSCGEYH+
Sbjct: 180 ALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVITAYAKFLDEAPELVKIMQVSCGEYHT 239
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
AAVS+ GEVYTWGLGS+GQLGH SLQSGDKEL+PRRVV LDG+ +K+VACGGVH+CAL+
Sbjct: 240 AAVSDTGEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSMKEVACGGVHTCALSL 299
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+GALYAWGG QAGQLGLGPQ+ + N S+ RN+P+LV+P V+LVACGHSHTLVY
Sbjct: 300 EGALYAWGGGQAGQLGLGPQSGFLFSVSNGSEMLLRNVPVLVIPTDVRLVACGHSHTLVY 359
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSLKEL 420
MR+GRI GWGYNSYGQAANEKS+YAWYPSPVDWCVG+VRKLAAGGGHSAVL DA SLKEL
Sbjct: 360 MREGRICGWGYNSYGQAANEKSSYAWYPSPVDWCVGQVRKLAAGGGHSAVLTDAFSLKEL 419
Query: 421 CEFRLAESVTLSNASEIEDVASRTGSEALARLCERLREHSLHGD 464
CEF+LA+SV LSNAS+I+DVA R GSEALARLCERLRE L GD
Sbjct: 420 CEFQLADSVNLSNASKIQDVAFRMGSEALARLCERLREQLLDGD 463
>gi|30678534|ref|NP_186879.2| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
gi|332640269|gb|AEE73790.1| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
Length = 471
Score = 745 bits (1923), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/464 (80%), Positives = 408/464 (87%), Gaps = 1/464 (0%)
Query: 1 MDINEIIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA 60
MDI EIIGE A P +IP KSAIYVWGYN SGQTGR +E+ LRIPKQLPPELFGCPAGA
Sbjct: 1 MDIGEIIGEVA-PSVSIPTKSAIYVWGYNQSGQTGRNEQEKLLRIPKQLPPELFGCPAGA 59
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
NSRWLDI+CG EHTAAVASDG+LF WGANE+GQLGDGTE GRKHP+KVKQLQSEFVK +S
Sbjct: 60 NSRWLDISCGREHTAAVASDGSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVS 119
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVV 180
CGA CTAAIAEPRENDGT+STSRLWVWGQNQGSN PRLF GAF T I QVSCG+ HVV
Sbjct: 120 CGAFCTAAIAEPRENDGTLSTSRLWVWGQNQGSNLPRLFSGAFPATTAIRQVSCGTAHVV 179
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
ALSE GLLQAWGYNE GQLGRG+TCEGLQ PRVI YAKFLDEAPEL KI Q+SCGEYH+
Sbjct: 180 ALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCGEYHT 239
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
AA+S+ GEVYTWGLGS+GQLGH SLQSGDKEL+PRRVV LDG+ +K+VACGGVH+CAL+
Sbjct: 240 AALSDAGEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSMKEVACGGVHTCALSL 299
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+GALYAWGG QAGQLGLGPQ+ F + N S+ RN+P+LV+P V+LVACGHSHTLVY
Sbjct: 300 EGALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVLVIPTDVRLVACGHSHTLVY 359
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSLKEL 420
MR+GRI GWGYNSYGQAANEKS+YAWYPSPVDWCVG+VRKLAAGGGHSAVL DA SLKEL
Sbjct: 360 MREGRICGWGYNSYGQAANEKSSYAWYPSPVDWCVGQVRKLAAGGGHSAVLTDAFSLKEL 419
Query: 421 CEFRLAESVTLSNASEIEDVASRTGSEALARLCERLREHSLHGD 464
CEF+LA+SV LSNASEI+DVA R GSEALARLCERLRE L GD
Sbjct: 420 CEFQLADSVNLSNASEIQDVAFRMGSEALARLCERLREQLLDGD 463
>gi|449481389|ref|XP_004156168.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Cucumis sativus]
Length = 485
Score = 744 bits (1922), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/457 (79%), Positives = 405/457 (88%), Gaps = 2/457 (0%)
Query: 1 MDINEIIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA 60
MDI++I G T ++P KSAIYVWGYN SGQTGRKG++ QLR+P+QL P+LFGCP
Sbjct: 1 MDIDDIFGMTQNV--SLPRKSAIYVWGYNQSGQTGRKGKDHQLRVPRQLHPDLFGCPGEI 58
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
NSRWLDIACG EHTAAVASDG+LFTWGAN+FGQLGDGTEE K P+KV QLQ EFVKS+S
Sbjct: 59 NSRWLDIACGREHTAAVASDGSLFTWGANDFGQLGDGTEEKSKLPKKVNQLQGEFVKSVS 118
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVV 180
CGAHCTAAIAEPRENDGT+ST RLW+WGQNQGSNFPRLFWGAFTP TII QVSCG+VHVV
Sbjct: 119 CGAHCTAAIAEPRENDGTLSTRRLWIWGQNQGSNFPRLFWGAFTPQTIIRQVSCGAVHVV 178
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
ALS+ G LQAWGYNEYGQLGRG+T EGLQG R+I +AKFLDEAPEL IT+VSCGEYHS
Sbjct: 179 ALSDDGQLQAWGYNEYGQLGRGVTSEGLQGARIINAFAKFLDEAPELVTITKVSCGEYHS 238
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
AA+SENGEVYTWGLGS+GQLGHCSLQS DKEL+PRRVVALDGI +KD+ACGGVH+CA+T
Sbjct: 239 AAISENGEVYTWGLGSMGQLGHCSLQSADKELIPRRVVALDGICVKDIACGGVHTCAITQ 298
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
G+LYAWGG Q GQLG+GPQT FS I +S+T+ RN+P++VV +GVQ VACGHSHTLV
Sbjct: 299 NGSLYAWGGGQVGQLGVGPQTGFFSCIAGDSETFLRNLPVVVVSDGVQHVACGHSHTLVS 358
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSLKEL 420
+DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL DACSLKEL
Sbjct: 359 TKDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKEL 418
Query: 421 CEFRLAESVTLSNASEIEDVASRTGSEALARLCERLR 457
CEFRLA++V NASEIEDVASRTGS+ALARLC RLR
Sbjct: 419 CEFRLADTVNSQNASEIEDVASRTGSDALARLCGRLR 455
>gi|449447434|ref|XP_004141473.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Cucumis sativus]
Length = 485
Score = 744 bits (1920), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/457 (79%), Positives = 405/457 (88%), Gaps = 2/457 (0%)
Query: 1 MDINEIIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA 60
MDI++I G T ++P KSAIYVWGYN SGQTGRKG++ QLR+P+QL P+LFGCP
Sbjct: 1 MDIDDIFGMTQNV--SLPRKSAIYVWGYNQSGQTGRKGKDHQLRVPRQLHPDLFGCPGEI 58
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
NSRWLDIACG EHTAAVASDG+LFTWGAN+FGQLGDGTEE K P+KV QLQ EFVKS+S
Sbjct: 59 NSRWLDIACGREHTAAVASDGSLFTWGANDFGQLGDGTEEKSKLPKKVNQLQGEFVKSVS 118
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVV 180
CGAHCTAAIAEPRENDGT+ST RLW+WGQNQGSNFPRLFWGAFTP TII QVSCG+VHVV
Sbjct: 119 CGAHCTAAIAEPRENDGTLSTCRLWIWGQNQGSNFPRLFWGAFTPQTIIRQVSCGAVHVV 178
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
ALS+ G LQAWGYNEYGQLGRG+T EGLQG R+I +AKFLDEAPEL IT+VSCGEYHS
Sbjct: 179 ALSDDGQLQAWGYNEYGQLGRGVTSEGLQGARIINAFAKFLDEAPELVTITKVSCGEYHS 238
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
AA+SENGEVYTWGLGS+GQLGHCSLQS DKEL+PRRVVALDGI +KD+ACGGVH+CA+T
Sbjct: 239 AAISENGEVYTWGLGSMGQLGHCSLQSADKELIPRRVVALDGICVKDIACGGVHTCAITQ 298
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
G+LYAWGG Q GQLG+GPQT FS I +S+T+ RN+P++VV +GVQ VACGHSHTLV
Sbjct: 299 NGSLYAWGGGQVGQLGVGPQTGFFSCIAGDSETFLRNLPVVVVSDGVQHVACGHSHTLVS 358
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSLKEL 420
+DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL DACSLKEL
Sbjct: 359 TKDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSLKEL 418
Query: 421 CEFRLAESVTLSNASEIEDVASRTGSEALARLCERLR 457
CEFRLA++V NASEIEDVASRTGS+ALARLC RLR
Sbjct: 419 CEFRLADTVNSQNASEIEDVASRTGSDALARLCGRLR 455
>gi|90657596|gb|ABD96895.1| hypothetical protein [Cleome spinosa]
Length = 477
Score = 741 bits (1913), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/475 (77%), Positives = 410/475 (86%), Gaps = 1/475 (0%)
Query: 1 MDINEIIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA 60
MDINEIIGETA PV +P KSAIYVWGYN SGQTGR G+E+ LRIPKQLPP+LFGCP+GA
Sbjct: 1 MDINEIIGETASPV-TLPTKSAIYVWGYNQSGQTGRNGKEKLLRIPKQLPPDLFGCPSGA 59
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
NSRWLDIACG EHT+AVASDG+LFTWGANE+GQLGDGTE GRK P+KVK LQSEFVKS+S
Sbjct: 60 NSRWLDIACGREHTSAVASDGSLFTWGANEYGQLGDGTEVGRKRPKKVKHLQSEFVKSVS 119
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVV 180
CGA CTAAIAEPRENDGT+S SRLWVWGQNQGSN PRLF GAF T I QVSCG+ HVV
Sbjct: 120 CGAFCTAAIAEPRENDGTLSMSRLWVWGQNQGSNLPRLFSGAFPAETAIRQVSCGTAHVV 179
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
ALSE GLLQAWGYNE+GQLGRG+T EGLQ PR+I YAKFLDEAPEL KI Q+SCGEYH+
Sbjct: 180 ALSEEGLLQAWGYNEHGQLGRGVTSEGLQAPRLIAAYAKFLDEAPELVKIAQISCGEYHT 239
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
AAVSE GEVYTWGLGS+GQLGH SLQ GDKEL+PRRV LD + +K+V+CGGVH+CAL+S
Sbjct: 240 AAVSEKGEVYTWGLGSMGQLGHISLQVGDKELIPRRVAGLDSLCVKEVSCGGVHTCALSS 299
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
GALYAWGG QAGQLGLGPQ+ FS I ++ RN+P LV+P VQLVACGHSHTLVY
Sbjct: 300 DGALYAWGGGQAGQLGLGPQSGFFSCILGGTEMLLRNVPALVIPIDVQLVACGHSHTLVY 359
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSLKEL 420
M+DGRI GWGYNSYGQAAN+KS+YAW+PSPVDWCVG+VRKLAAGGGHSAVL DA SLKEL
Sbjct: 360 MKDGRIRGWGYNSYGQAANDKSSYAWFPSPVDWCVGQVRKLAAGGGHSAVLTDAFSLKEL 419
Query: 421 CEFRLAESVTLSNASEIEDVASRTGSEALARLCERLREHSLHGDEFDCDDDTRNG 475
CEF+LAESVT+SNA +I+DVASR GSEALARLCERLRE L D ++D G
Sbjct: 420 CEFQLAESVTVSNALKIQDVASRMGSEALARLCERLREQLLDAGHLDHEEDETCG 474
>gi|6041806|gb|AAF02126.1|AC009755_19 unknown protein [Arabidopsis thaliana]
Length = 456
Score = 738 bits (1906), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/457 (80%), Positives = 404/457 (88%), Gaps = 1/457 (0%)
Query: 1 MDINEIIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA 60
MDI EIIGE A P +IP KSAIYVWGYN SGQTGR +E+ LRIPKQLPPELFGCPAGA
Sbjct: 1 MDIGEIIGEVA-PSVSIPTKSAIYVWGYNQSGQTGRNEQEKLLRIPKQLPPELFGCPAGA 59
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
NSRWLDI+CG EHTAAVASDG+LF WGANE+GQLGDGTE GRKHP+KVKQLQSEFVK +S
Sbjct: 60 NSRWLDISCGREHTAAVASDGSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVS 119
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVV 180
CGA CTAAIAEPRENDGT+STSRLWVWGQNQGSN PRLF GAF T I QVSCG+ HVV
Sbjct: 120 CGAFCTAAIAEPRENDGTLSTSRLWVWGQNQGSNLPRLFSGAFPATTAIRQVSCGTAHVV 179
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
ALSE GLLQAWGYNE GQLGRG+TCEGLQ PRVI YAKFLDEAPEL KI Q+SCGEYH+
Sbjct: 180 ALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCGEYHT 239
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
AA+S+ GEVYTWGLGS+GQLGH SLQSGDKEL+PRRVV LDG+ +K+VACGGVH+CAL+
Sbjct: 240 AALSDAGEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSMKEVACGGVHTCALSL 299
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+GALYAWGG QAGQLGLGPQ+ F + N S+ RN+P+LV+P V+LVACGHSHTLVY
Sbjct: 300 EGALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVLVIPTDVRLVACGHSHTLVY 359
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSLKEL 420
MR+GRI GWGYNSYGQAANEKS+YAWYPSPVDWCVG+VRKLAAGGGHSAVL DA SLKEL
Sbjct: 360 MREGRICGWGYNSYGQAANEKSSYAWYPSPVDWCVGQVRKLAAGGGHSAVLTDAFSLKEL 419
Query: 421 CEFRLAESVTLSNASEIEDVASRTGSEALARLCERLR 457
CEF+LA+SV LSNASEI+DVA R GSEALARLCERLR
Sbjct: 420 CEFQLADSVNLSNASEIQDVAFRMGSEALARLCERLR 456
>gi|218193272|gb|EEC75699.1| hypothetical protein OsI_12517 [Oryza sativa Indica Group]
Length = 555
Score = 737 bits (1903), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/459 (76%), Positives = 398/459 (86%), Gaps = 2/459 (0%)
Query: 1 MDINEIIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA 60
MD+++++G V +P KSAIY+WGYNHSGQT RKG+E LRIPK LPP+LF G
Sbjct: 77 MDMDDMLG--GLRVAGVPTKSAIYLWGYNHSGQTARKGKECHLRIPKSLPPKLFKWQDGK 134
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
N RW+D+ACG HTAAVASDG+L+TWGAN+FGQLGDGTEE K P+KVK L++EFVKS+S
Sbjct: 135 NLRWIDVACGRGHTAAVASDGSLYTWGANDFGQLGDGTEESAKEPQKVKALETEFVKSVS 194
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVV 180
CGAHCTAA+AEPREN+GTIS SRLWVWGQNQGS++PRLFWGA PNT+I QVSCG+VHV+
Sbjct: 195 CGAHCTAAVAEPRENNGTISRSRLWVWGQNQGSDYPRLFWGALAPNTVIRQVSCGAVHVM 254
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
ALSE GLLQAWGYNEYGQLGRG T EGLQG RV+ YA+FLDEAPEL KI +VSCGEYH+
Sbjct: 255 ALSEDGLLQAWGYNEYGQLGRGCTSEGLQGARVLNAYARFLDEAPELVKIVRVSCGEYHT 314
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
AA+SENGEVYTWGLGS+GQLGHCSLQSGDKEL+PRRVVALD I+DV+CGGVHSCA+T
Sbjct: 315 AAISENGEVYTWGLGSMGQLGHCSLQSGDKELIPRRVVALDRTVIRDVSCGGVHSCAVTE 374
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
GALYAWGG GQLGLGPQ+ FS N SD RNIP+L++P+GVQLV CGHSHTLV
Sbjct: 375 DGALYAWGGGHVGQLGLGPQSGFFSCALNGSDMLLRNIPVLIIPSGVQLVTCGHSHTLVS 434
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSLKEL 420
M+D RI+GWGYNSYGQAANEKSTYAW+PSPVDWCVGEVR+LAAGGGHSAVL DACSLKEL
Sbjct: 435 MKDSRIYGWGYNSYGQAANEKSTYAWFPSPVDWCVGEVRRLAAGGGHSAVLTDACSLKEL 494
Query: 421 CEFRLAESVTLSNASEIEDVASRTGSEALARLCERLREH 459
CEF+LAE+V +SNA IEDVASRTG +ALARLCE+LREH
Sbjct: 495 CEFKLAETVNMSNALLIEDVASRTGGDALARLCEKLREH 533
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 33/225 (14%)
Query: 162 AFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGR-GITCEGLQGPRVIKGYAKF 220
A+T + G + V + + WGYN GQ R G C L+ P+ +
Sbjct: 71 AYTDKAMDMDDMLGGLRVAGVPTKSAIYLWGYNHSGQTARKGKECH-LRIPKSLPPKLFK 129
Query: 221 LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL 280
+ L I V+CG H+AAV+ +G +YTWG GQLG + +S + P++V AL
Sbjct: 130 WQDGKNLRWI-DVACGRGHTAAVASDGSLYTWGANDFGQLGDGTEESAKE---PQKVKAL 185
Query: 281 DGIFIKDVACGGVHSCALT---------SKGALYAWGGSQAGQLGLGPQTRSFSLIPNES 331
+ F+K V+CG + A+ S+ L+ WG +Q P+ +L PN
Sbjct: 186 ETEFVKSVSCGAHCTAAVAEPRENNGTISRSRLWVWGQNQGSDY---PRLFWGALAPNTV 242
Query: 332 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
++ V+CG H + DG + WGYN YGQ
Sbjct: 243 ---------------IRQVSCGAVHVMALSEDGLLQAWGYNEYGQ 272
>gi|259490348|ref|NP_001159191.1| uncharacterized protein LOC100304276 [Zea mays]
gi|223942555|gb|ACN25361.1| unknown [Zea mays]
gi|414871691|tpg|DAA50248.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 480
Score = 736 bits (1899), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/459 (75%), Positives = 397/459 (86%), Gaps = 2/459 (0%)
Query: 1 MDINEIIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA 60
MD+++++ V +P KSAIY+WGYNHSGQT RKG+E LRIPK LPP+LF G
Sbjct: 1 MDVDDVLSNLR--VVGVPTKSAIYIWGYNHSGQTARKGKECHLRIPKSLPPKLFKLGNGK 58
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
+ RW DIACG EHTAAVASDG+LFTWGANEFGQLGDGTE+ K P+KVK L++EFVKS+S
Sbjct: 59 SLRWTDIACGREHTAAVASDGSLFTWGANEFGQLGDGTEDSAKEPKKVKSLETEFVKSVS 118
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVV 180
CGAHCTAA+AEPRENDGT+S SRLWVWGQNQGS++PRLFWGAFTPNT+I QVSCG+VHV+
Sbjct: 119 CGAHCTAAVAEPRENDGTVSKSRLWVWGQNQGSDYPRLFWGAFTPNTVIKQVSCGAVHVM 178
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
ALSE GLLQAWGYNEYGQLGRG T +GLQG RV+ YA+FLD+APE KI +VSCGEYH+
Sbjct: 179 ALSEDGLLQAWGYNEYGQLGRGRTSQGLQGARVLNAYARFLDDAPEQVKIVRVSCGEYHT 238
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
AA+SENGEVYTWGLGS+GQLGHCSLQSGD EL+PRRVVALDGI + DV+CGGVHSCA+T
Sbjct: 239 AAISENGEVYTWGLGSMGQLGHCSLQSGDNELIPRRVVALDGIVVGDVSCGGVHSCAVTE 298
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
GALYAWGG GQLG+GPQ FS N SD RNIP+LV+P+GV+L CGHSHTLV
Sbjct: 299 GGALYAWGGGHVGQLGVGPQGGFFSCSLNGSDMLLRNIPVLVIPSGVRLATCGHSHTLVS 358
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSLKEL 420
M+DGRI+GWGYNSYGQA NEKSTYAW+PSPVDWCVGEVR+LAAGGGHSAVL DACSLKEL
Sbjct: 359 MKDGRIYGWGYNSYGQATNEKSTYAWFPSPVDWCVGEVRRLAAGGGHSAVLTDACSLKEL 418
Query: 421 CEFRLAESVTLSNASEIEDVASRTGSEALARLCERLREH 459
CEF+LAE+V LSNA IEDVASRTG++ALARLCE++REH
Sbjct: 419 CEFKLAETVNLSNAQLIEDVASRTGADALARLCEKVREH 457
>gi|357121203|ref|XP_003562310.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Brachypodium distachyon]
Length = 480
Score = 734 bits (1896), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/469 (74%), Positives = 404/469 (86%), Gaps = 4/469 (0%)
Query: 1 MDINEIIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA 60
MDI++++ V +P KSAIY+WGYN SGQT RKG++R LRIPK LPP+LF C G
Sbjct: 1 MDIDDVLCNLR--VVGVPTKSAIYIWGYNQSGQTARKGKDRHLRIPKSLPPKLFKCRDGE 58
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
N RW+DIACG EHTAAVASDG+LFTWGAN+FGQLGDGTEE K P+KV +++EFVKS+S
Sbjct: 59 NLRWIDIACGREHTAAVASDGSLFTWGANDFGQLGDGTEESAKEPKKVNAIETEFVKSVS 118
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVV 180
CGAHCTAAIAEPRENDGTIS SRLWVWGQNQGS++PRLFWGAF PNT+I QVSCG+VHV+
Sbjct: 119 CGAHCTAAIAEPRENDGTISKSRLWVWGQNQGSDYPRLFWGAFAPNTVILQVSCGAVHVM 178
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
ALSE G+LQAWGYNEYGQLGRG T EGLQG RV+ YA+FLD+APEL KI +VSCGEYH+
Sbjct: 179 ALSEDGVLQAWGYNEYGQLGRGCTSEGLQGARVLNAYARFLDDAPELVKIVRVSCGEYHA 238
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
AA+SE+GEVYTWGLGS+GQLGH SLQSGDKEL+PRRVVAL+G+ DV+CGGVHSCA+T
Sbjct: 239 AAISEHGEVYTWGLGSMGQLGHRSLQSGDKELIPRRVVALEGMVAGDVSCGGVHSCAVTE 298
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
G LYAWGG GQLGLGPQ+ FS N SD RNIP+LV+P+GV+LV CGHSHTL+
Sbjct: 299 GGTLYAWGGGHVGQLGLGPQSGFFSCALNGSDMLLRNIPVLVIPSGVRLVTCGHSHTLIS 358
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSLKEL 420
M+DGRI+GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVR+LAAGGGHSAVL DA SLKEL
Sbjct: 359 MKDGRIYGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRRLAAGGGHSAVLTDASSLKEL 418
Query: 421 CEFRLAESVTLSNASEIEDVASRTGSEALARLCERLREHSLHGDEFDCD 469
CEF+LAE+V +SNA IEDVASRTG+++LARLCERLREH + ++ DC+
Sbjct: 419 CEFKLAETVNVSNAQIIEDVASRTGADSLARLCERLREHLV--EQGDCE 465
>gi|242038901|ref|XP_002466845.1| hypothetical protein SORBIDRAFT_01g015100 [Sorghum bicolor]
gi|241920699|gb|EER93843.1| hypothetical protein SORBIDRAFT_01g015100 [Sorghum bicolor]
Length = 485
Score = 733 bits (1893), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/460 (75%), Positives = 398/460 (86%), Gaps = 3/460 (0%)
Query: 1 MDINEIIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA 60
MD+++++ V +P KSAIY+WGYNHSGQT RKG+E LRIPK LPP+LF G
Sbjct: 1 MDVDDVLSNLR--VVGVPTKSAIYIWGYNHSGQTARKGKECHLRIPKSLPPKLFKLGNGK 58
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
+ RW DIACG EHTAAVASDG+LFTWGANEFGQLGDGTEE K P+KVK L++EFVKS+S
Sbjct: 59 SLRWTDIACGREHTAAVASDGSLFTWGANEFGQLGDGTEESAKEPKKVKSLETEFVKSVS 118
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVV 180
CGAHCTAA+AEPRENDGT+S SRLWVWGQNQGS++PRLFWGAFTPNT+I QVSCG+VHV+
Sbjct: 119 CGAHCTAAVAEPRENDGTVSKSRLWVWGQNQGSDYPRLFWGAFTPNTVIKQVSCGAVHVM 178
Query: 181 ALSECGLLQAWG-YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
ALSE GLLQAWG YNEYGQLGRG T +GLQG RV+ YA+FLD+APE KI +VSCGEYH
Sbjct: 179 ALSEDGLLQAWGSYNEYGQLGRGRTSQGLQGARVLNAYARFLDDAPEQVKIVRVSCGEYH 238
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT 299
+AA+SENGEVYTWGLGS+GQLGHCSLQSGD EL+PRR+VALDGI ++DV+CGGVHSCA+T
Sbjct: 239 TAAISENGEVYTWGLGSMGQLGHCSLQSGDNELIPRRIVALDGIVVRDVSCGGVHSCAVT 298
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
GALYAWGG GQLG+GPQ FS N SD RNIP+LV+P+GV+L CGHSHTLV
Sbjct: 299 ESGALYAWGGGHVGQLGVGPQGGFFSCSLNGSDMLLRNIPVLVIPSGVRLATCGHSHTLV 358
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSLKE 419
M+DGRI+GWGYNSYGQAANEKSTYAW+PSPVDWCVGEVR+LAAGGGHSAVL DACSLKE
Sbjct: 359 SMKDGRIYGWGYNSYGQAANEKSTYAWFPSPVDWCVGEVRRLAAGGGHSAVLTDACSLKE 418
Query: 420 LCEFRLAESVTLSNASEIEDVASRTGSEALARLCERLREH 459
LCEF+LAE+V LSNA IEDVASRTG++ALARLC ++REH
Sbjct: 419 LCEFKLAETVNLSNAELIEDVASRTGADALARLCGKVREH 458
>gi|22795248|gb|AAN08220.1| putative chromosome condensation regulator [Oryza sativa Japonica
Group]
gi|108709680|gb|ABF97475.1| regulator of chromosome condensation, putative, expressed [Oryza
sativa Japonica Group]
Length = 505
Score = 727 bits (1877), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/485 (72%), Positives = 399/485 (82%), Gaps = 28/485 (5%)
Query: 1 MDINEIIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA 60
MD+++++G V +P KSAIY+WGYNHSGQT RKG+E LRIPK LPP+LF G
Sbjct: 1 MDMDDMLG--GLRVAGVPTKSAIYLWGYNHSGQTARKGKECHLRIPKSLPPKLFKWQDGK 58
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
N RW+D+ACG HTAAVASDG+L+TWGAN+FGQLGDGTEE K P+KVK L++EFVKS+S
Sbjct: 59 NLRWIDVACGRGHTAAVASDGSLYTWGANDFGQLGDGTEESAKEPQKVKALETEFVKSVS 118
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNT------------- 167
CGAHCTAA+AEPREN+GTIS SRLWVWGQNQGS++PRLFWGAF PNT
Sbjct: 119 CGAHCTAAVAEPRENNGTISRSRLWVWGQNQGSDYPRLFWGAFAPNTASGATEQSTITCA 178
Query: 168 -------------IICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVI 214
+I QVSCG+VHV+ALSE GLLQAWGYNEYGQLGRG T EGLQG RV+
Sbjct: 179 SSQFLSLRCLSLEVIHQVSCGAVHVMALSEDGLLQAWGYNEYGQLGRGCTSEGLQGARVL 238
Query: 215 KGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLP 274
YA+FLDEAPEL KI +VSCGEYH+AA+SENGEVYTWGLGS+GQLGHCSLQSGDKEL+P
Sbjct: 239 NAYARFLDEAPELVKIVRVSCGEYHTAAISENGEVYTWGLGSMGQLGHCSLQSGDKELIP 298
Query: 275 RRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTY 334
RRVVALD I+DV+CGGVHSCA+T GALYAWGG GQLGLGPQ+ FS N SD
Sbjct: 299 RRVVALDRTVIRDVSCGGVHSCAVTEDGALYAWGGGHVGQLGLGPQSGFFSCALNGSDML 358
Query: 335 FRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWC 394
RNIP+LV+P+GVQLV CGHSHTLV M+D RI+GWGYNSYGQAANEKSTYAW+PSPVDWC
Sbjct: 359 LRNIPVLVIPSGVQLVTCGHSHTLVSMKDSRIYGWGYNSYGQAANEKSTYAWFPSPVDWC 418
Query: 395 VGEVRKLAAGGGHSAVLADACSLKELCEFRLAESVTLSNASEIEDVASRTGSEALARLCE 454
VGEVR+LAAGGGHSAVL DACSLKELCEF+LAE+V +SNA IEDVASRTG +ALARLCE
Sbjct: 419 VGEVRRLAAGGGHSAVLTDACSLKELCEFKLAETVNMSNALLIEDVASRTGGDALARLCE 478
Query: 455 RLREH 459
+LREH
Sbjct: 479 KLREH 483
>gi|222625331|gb|EEE59463.1| hypothetical protein OsJ_11655 [Oryza sativa Japonica Group]
Length = 581
Score = 726 bits (1875), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/485 (72%), Positives = 399/485 (82%), Gaps = 28/485 (5%)
Query: 1 MDINEIIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA 60
MD+++++G V +P KSAIY+WGYNHSGQT RKG+E LRIPK LPP+LF G
Sbjct: 77 MDMDDMLG--GLRVAGVPTKSAIYLWGYNHSGQTARKGKECHLRIPKSLPPKLFKWQDGK 134
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
N RW+D+ACG HTAAVASDG+L+TWGAN+FGQLGDGTEE K P+KVK L++EFVKS+S
Sbjct: 135 NLRWIDVACGRGHTAAVASDGSLYTWGANDFGQLGDGTEESAKEPQKVKALETEFVKSVS 194
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNT------------- 167
CGAHCTAA+AEPREN+GTIS SRLWVWGQNQGS++PRLFWGAF PNT
Sbjct: 195 CGAHCTAAVAEPRENNGTISRSRLWVWGQNQGSDYPRLFWGAFAPNTASGATEQSTITCA 254
Query: 168 -------------IICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVI 214
+I QVSCG+VHV+ALSE GLLQAWGYNEYGQLGRG T EGLQG RV+
Sbjct: 255 SSQFLSLRCLSLEVIHQVSCGAVHVMALSEDGLLQAWGYNEYGQLGRGCTSEGLQGARVL 314
Query: 215 KGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLP 274
YA+FLDEAPEL KI +VSCGEYH+AA+SENGEVYTWGLGS+GQLGHCSLQSGDKEL+P
Sbjct: 315 NAYARFLDEAPELVKIVRVSCGEYHTAAISENGEVYTWGLGSMGQLGHCSLQSGDKELIP 374
Query: 275 RRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTY 334
RRVVALD I+DV+CGGVHSCA+T GALYAWGG GQLGLGPQ+ FS N SD
Sbjct: 375 RRVVALDRTVIRDVSCGGVHSCAVTEDGALYAWGGGHVGQLGLGPQSGFFSCALNGSDML 434
Query: 335 FRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWC 394
RNIP+LV+P+GVQLV CGHSHTLV M+D RI+GWGYNSYGQAANEKSTYAW+PSPVDWC
Sbjct: 435 LRNIPVLVIPSGVQLVTCGHSHTLVSMKDSRIYGWGYNSYGQAANEKSTYAWFPSPVDWC 494
Query: 395 VGEVRKLAAGGGHSAVLADACSLKELCEFRLAESVTLSNASEIEDVASRTGSEALARLCE 454
VGEVR+LAAGGGHSAVL DACSLKELCEF+LAE+V +SNA IEDVASRTG +ALARLCE
Sbjct: 495 VGEVRRLAAGGGHSAVLTDACSLKELCEFKLAETVNMSNALLIEDVASRTGGDALARLCE 554
Query: 455 RLREH 459
+LREH
Sbjct: 555 KLREH 559
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 105/234 (44%), Gaps = 25/234 (10%)
Query: 162 AFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGR-GITCEGLQGPRVIKGYAKF 220
A+T + G + V + + WGYN GQ R G C L+ P+ +
Sbjct: 71 AYTDKAMDMDDMLGGLRVAGVPTKSAIYLWGYNHSGQTARKGKECH-LRIPKSLPPKLFK 129
Query: 221 LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL 280
+ L I V+CG H+AAV+ +G +YTWG GQLG + +S + P++V AL
Sbjct: 130 WQDGKNLRWI-DVACGRGHTAAVASDGSLYTWGANDFGQLGDGTEESAKE---PQKVKAL 185
Query: 281 DGIFIKDVACGGVHSCALT---------SKGALYAWGGSQAGQL------GLGPQTRSFS 325
+ F+K V+CG + A+ S+ L+ WG +Q P T S +
Sbjct: 186 ETEFVKSVSCGAHCTAAVAEPRENNGTISRSRLWVWGQNQGSDYPRLFWGAFAPNTASGA 245
Query: 326 LIPNE---SDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+ + + F ++ L + + V+CG H + DG + WGYN YGQ
Sbjct: 246 TEQSTITCASSQFLSLRCLSLEV-IHQVSCGAVHVMALSEDGLLQAWGYNEYGQ 298
>gi|302783358|ref|XP_002973452.1| hypothetical protein SELMODRAFT_99040 [Selaginella moellendorffii]
gi|300159205|gb|EFJ25826.1| hypothetical protein SELMODRAFT_99040 [Selaginella moellendorffii]
Length = 437
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 249/441 (56%), Positives = 323/441 (73%), Gaps = 9/441 (2%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+PA+S +Y WGYN GQ G++ I +P + ++ R + I+CG EHTAA
Sbjct: 6 VPARSVLYAWGYNQCGQAGQESA-----IHNAVPHPIRVAIHPSSLRLIAISCGLEHTAA 60
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ASDG+LFTWG+N+FGQLGDG+E P++V L+ E VKS++CGA+CTAAIA+ R D
Sbjct: 61 IASDGSLFTWGSNQFGQLGDGSETNSDRPKRVYGLRDEAVKSVACGANCTAAIADSR--D 118
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
GT R+W+WGQNQGSN PRLF GAF+ +T++ QV+CG H ALSE G+LQ WGYNE+
Sbjct: 119 GTCR-GRMWIWGQNQGSNSPRLFSGAFSSSTVVIQVACGGAHAAALSEHGVLQTWGYNEH 177
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLGRGI+CEGLQG +++ + KFL+E E K+ QV CGEYH+AA++ NG+VYTWGLGS
Sbjct: 178 GQLGRGISCEGLQGAKIVTSFVKFLNEPVETVKVKQVVCGEYHTAAIAHNGDVYTWGLGS 237
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
GQLGH SLQSG+KE+LPRRVV L+G+ + ++ GGVHSCA++S G LY WGGS AGQLG
Sbjct: 238 SGQLGHRSLQSGNKEVLPRRVVTLEGVDVVQISAGGVHSCAISSAGGLYMWGGSHAGQLG 297
Query: 317 LGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
LGP+ ++ D +F+ IP+LV+P+G + CG HTLV M +GR+ G GYNSYGQ
Sbjct: 298 LGPRQDRI-CGSSDIDFFFQRIPVLVIPSGARSATCGDLHTLVRMANGRLLGCGYNSYGQ 356
Query: 377 AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSLKELCEFRLAESVTLSNASE 436
A + K+ YAWYPSP+DWCVGE+ LAAGGGHSAVL A +LKE+CE +L + VT S AS
Sbjct: 357 ADSGKAYYAWYPSPIDWCVGEITCLAAGGGHSAVLTQASNLKEICELKLVDYVTASTAST 416
Query: 437 IEDVASRTGSEALARLCERLR 457
I D+ASR ++LAR C R
Sbjct: 417 IADIASRMSCDSLARFCLTFR 437
>gi|302823907|ref|XP_002993601.1| hypothetical protein SELMODRAFT_449178 [Selaginella moellendorffii]
gi|300138529|gb|EFJ05293.1| hypothetical protein SELMODRAFT_449178 [Selaginella moellendorffii]
Length = 441
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 248/443 (55%), Positives = 323/443 (72%), Gaps = 9/443 (2%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+PA+S +Y WGYN GQ G++ I +P + ++ R + I+CG EHTAA
Sbjct: 6 VPARSVLYAWGYNQCGQAGQESA-----IHSAVPHPIRVAIHPSSLRLIAISCGLEHTAA 60
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ASDG+LFTWG+N+FGQLGDG+E P++V L+ E VKS++CGA+CTAAIA+ R D
Sbjct: 61 IASDGSLFTWGSNQFGQLGDGSETNSDRPKRVYGLRDEAVKSVACGANCTAAIADSR--D 118
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
GT R+W+WGQNQGSN PRLF G F+ +T++ QV+CG H ALSE G+LQ WGYNE+
Sbjct: 119 GTCR-GRMWIWGQNQGSNSPRLFSGVFSSSTVVIQVACGGAHAAALSEHGVLQTWGYNEH 177
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLGRGI+CEGLQG +++ + KFL+E E K+ QV CGEYH+AA++ NG+VYTWGLGS
Sbjct: 178 GQLGRGISCEGLQGAKIVTSFVKFLNEPVETVKVKQVVCGEYHTAAIAHNGDVYTWGLGS 237
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
GQLGH SLQSG+KE+ PRRVV L+G+ + ++ GGVHSCA++S G LY WGGS AGQLG
Sbjct: 238 SGQLGHRSLQSGNKEVFPRRVVTLEGVDVVQISAGGVHSCAISSAGGLYMWGGSHAGQLG 297
Query: 317 LGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
LGP+ ++ D +F+ IP+LV+P+G + CG HTLV M +GR+ G GYNSYGQ
Sbjct: 298 LGPRQDRICGT-SDIDFFFQRIPVLVIPSGARSATCGDLHTLVRMANGRLLGCGYNSYGQ 356
Query: 377 AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSLKELCEFRLAESVTLSNASE 436
A + K+ YAWYPSP+DWCVGE+ LAAGGGHSAVL A +LKE+CE +L + VT S AS
Sbjct: 357 ADSGKAYYAWYPSPIDWCVGEITCLAAGGGHSAVLTQASNLKEICELKLVDYVTASTAST 416
Query: 437 IEDVASRTGSEALARLCERLREH 459
I D+ASR ++LAR C R+H
Sbjct: 417 IADIASRMSCDSLARFCLTFRDH 439
>gi|110738491|dbj|BAF01171.1| hypothetical protein [Arabidopsis thaliana]
Length = 248
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/249 (81%), Positives = 218/249 (87%), Gaps = 1/249 (0%)
Query: 1 MDINEIIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA 60
MDI EIIGE A P +IP KSAIYVWGYN SGQTGR +E+ LRIPKQLPPELFGCPAGA
Sbjct: 1 MDIGEIIGEVA-PSVSIPTKSAIYVWGYNQSGQTGRNEQEKLLRIPKQLPPELFGCPAGA 59
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
NSRWLDI+CG EHTAAVASDG+LF WGANE+GQLGDGTE GRKHP+KVKQLQSEFVK +S
Sbjct: 60 NSRWLDISCGREHTAAVASDGSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVS 119
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVV 180
CGA CTAAIAEPRENDGT+STSRLWVWGQNQGSN PRLF GAF T I QVSCG+ HVV
Sbjct: 120 CGAFCTAAIAEPRENDGTLSTSRLWVWGQNQGSNLPRLFSGAFPATTAIRQVSCGTAHVV 179
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
ALSE GLLQAWGYNE GQLGRG+TCEGLQ PRVI YAKFLDEAPEL KI Q+SCGEYH+
Sbjct: 180 ALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCGEYHT 239
Query: 241 AAVSENGEV 249
AA+S+ GEV
Sbjct: 240 AALSDAGEV 248
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 105/250 (42%), Gaps = 42/250 (16%)
Query: 140 STSRLWVWGQNQGSNF----------------PRLFWGAFTPNTIICQVSCGSVHVVALS 183
+ S ++VWG NQ P LF N+ +SCG H A++
Sbjct: 18 TKSAIYVWGYNQSGQTGRNEQEKLLRIPKQLPPELFGCPAGANSRWLDISCGREHTAAVA 77
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
G L AWG NEYGQLG G T G + P+ +K + E + VSCG + +AA+
Sbjct: 78 SDGSLFAWGANEYGQLGDG-TEVGRKHPKKVKQL--------QSEFVKFVSCGAFCTAAI 128
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF-----IKDVACGGVHSCAL 298
+E E G S +L G LPR G F I+ V+CG H AL
Sbjct: 129 AEPRE--NDGTLSTSRLWVWGQNQGSN--LPR---LFSGAFPATTAIRQVSCGTAHVVAL 181
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFSL--IPNESDTYFRNIPILVVPNGVQLVACGHSH 356
+ +G L AWG ++ GQLG G + N + P LV + ++CG H
Sbjct: 182 SEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELV---KIMQLSCGEYH 238
Query: 357 TLVYMRDGRI 366
T G +
Sbjct: 239 TAALSDAGEV 248
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 110/263 (41%), Gaps = 59/263 (22%)
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL--------EKIT 231
V++ + WGYN+ GQ GR + L+ P+ + PEL +
Sbjct: 14 VSIPTKSAIYVWGYNQSGQTGRNEQEKLLRIPKQLP---------PELFGCPAGANSRWL 64
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
+SCG H+AAV+ +G ++ WG GQLG + + G K P++V L F+K V+CG
Sbjct: 65 DISCGREHTAAVASDGSLFAWGANEYGQLGDGT-EVGRKH--PKKVKQLQSEFVKFVSCG 121
Query: 292 GVHSCALT---------SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
+ A+ S L+ WG +Q L R FS
Sbjct: 122 AFCTAAIAEPRENDGTLSTSRLWVWGQNQGSNL-----PRLFS-------------GAFP 163
Query: 343 VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYG-----------QAANEKSTYAWYPSPV 391
++ V+CG +H + +G + WGYN G QA + YA +
Sbjct: 164 ATTAIRQVSCGTAHVVALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEA 223
Query: 392 DWCVGEVRKLAAGGGHSAVLADA 414
V ++ +L+ G H+A L+DA
Sbjct: 224 PELV-KIMQLSCGEYHTAALSDA 245
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 3/120 (2%)
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGH 354
S ++ +K A+Y WG +Q+GQ G Q + IP + P + ++CG
Sbjct: 13 SVSIPTKSAIYVWGYNQSGQTGRNEQEKLLR-IPKQLPPELFGCPAGANSRWLD-ISCGR 70
Query: 355 SHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH-SAVLAD 413
HT DG + WG N YGQ + +P V E K + G +A +A+
Sbjct: 71 EHTAAVASDGSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSCGAFCTAAIAE 130
>gi|223943903|gb|ACN26035.1| unknown [Zea mays]
gi|414871692|tpg|DAA50249.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 235
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 164/210 (78%), Positives = 184/210 (87%)
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
YTWGLGS+GQLGHCSLQSGD EL+PRRVVALDGI + DV+CGGVHSCA+T GALYAWGG
Sbjct: 3 YTWGLGSMGQLGHCSLQSGDNELIPRRVVALDGIVVGDVSCGGVHSCAVTEGGALYAWGG 62
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGW 369
GQLG+GPQ FS N SD RNIP+LV+P+GV+L CGHSHTLV M+DGRI+GW
Sbjct: 63 GHVGQLGVGPQGGFFSCSLNGSDMLLRNIPVLVIPSGVRLATCGHSHTLVSMKDGRIYGW 122
Query: 370 GYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSLKELCEFRLAESV 429
GYNSYGQA NEKSTYAW+PSPVDWCVGEVR+LAAGGGHSAVL DACSLKELCEF+LAE+V
Sbjct: 123 GYNSYGQATNEKSTYAWFPSPVDWCVGEVRRLAAGGGHSAVLTDACSLKELCEFKLAETV 182
Query: 430 TLSNASEIEDVASRTGSEALARLCERLREH 459
LSNA IEDVASRTG++ALARLCE++REH
Sbjct: 183 NLSNAQLIEDVASRTGADALARLCEKVREH 212
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 62/145 (42%), Gaps = 19/145 (13%)
Query: 168 IICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG-----ITCEGLQGPRVIKGYAKFLD 222
++ VSCG VH A++E G L AWG GQLG G +C + G L
Sbjct: 37 VVGDVSCGGVHSCAVTEGGALYAWGGGHVGQLGVGPQGGFFSCS-------LNGSDMLLR 89
Query: 223 EAPEL---EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA 279
P L + +CG H+ ++G +Y WG S GQ + + P V
Sbjct: 90 NIPVLVIPSGVRLATCGHSHTLVSMKDGRIYGWGYNSYGQATN---EKSTYAWFPSPVDW 146
Query: 280 LDGIFIKDVACGGVHSCALTSKGAL 304
G ++ +A GG HS LT +L
Sbjct: 147 CVG-EVRRLAAGGGHSAVLTDACSL 170
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 68/178 (38%), Gaps = 54/178 (30%)
Query: 24 YVWGYNHSGQTGR---KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
Y WG GQ G + + +L IP+++ L G G D++CG H+ AV
Sbjct: 3 YTWGLGSMGQLGHCSLQSGDNEL-IPRRVVA-LDGIVVG------DVSCGGVHSCAVTEG 54
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G L+ WG GQLG G + G SC +++
Sbjct: 55 GALYAWGGGHVGQLGVGPQGGF----------------FSC----------------SLN 82
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQ 198
S + + N P L P+ + +CG H + + G + WGYN YGQ
Sbjct: 83 GSDMLL------RNIPVL----VIPSGVRL-ATCGHSHTLVSMKDGRIYGWGYNSYGQ 129
Score = 38.1 bits (87), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 34/83 (40%), Gaps = 20/83 (24%)
Query: 22 AIYVWGYNHSGQTG-----------RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACG 70
A+Y WG H GQ G G + LR +P + P+G CG
Sbjct: 56 ALYAWGGGHVGQLGVGPQGGFFSCSLNGSDMLLR---NIPVLVI--PSGVRLA----TCG 106
Query: 71 HEHTAAVASDGTLFTWGANEFGQ 93
H HT DG ++ WG N +GQ
Sbjct: 107 HSHTLVSMKDGRIYGWGYNSYGQ 129
>gi|125544756|gb|EAY90895.1| hypothetical protein OsI_12508 [Oryza sativa Indica Group]
Length = 225
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 160/203 (78%), Positives = 178/203 (87%)
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
+GQLGHCSLQSGDKEL+PRRVVALD I+DV+CGGVHSCA+T GALYAWGG GQLG
Sbjct: 1 MGQLGHCSLQSGDKELIPRRVVALDRTVIRDVSCGGVHSCAVTEDGALYAWGGGHVGQLG 60
Query: 317 LGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
LGPQ+ FS N SD RNIP+LV+P+GVQLV CGHSHTLV M+D RI+GWGYNSYGQ
Sbjct: 61 LGPQSGFFSCALNGSDMLLRNIPVLVIPSGVQLVTCGHSHTLVSMKDSRIYGWGYNSYGQ 120
Query: 377 AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSLKELCEFRLAESVTLSNASE 436
AANEKSTYAW+PSPVDWCVGEVR+LAAGGGHSAVL DACSLKELCEF+LAE+V +SNA
Sbjct: 121 AANEKSTYAWFPSPVDWCVGEVRRLAAGGGHSAVLTDACSLKELCEFKLAETVNMSNALL 180
Query: 437 IEDVASRTGSEALARLCERLREH 459
IEDVASRTG +ALARLCE+LREH
Sbjct: 181 IEDVASRTGGDALARLCEKLREH 203
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 63/146 (43%), Gaps = 19/146 (13%)
Query: 167 TIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG-----ITCEGLQGPRVIKGYAKFL 221
T+I VSCG VH A++E G L AWG GQLG G +C + G L
Sbjct: 27 TVIRDVSCGGVHSCAVTEDGALYAWGGGHVGQLGLGPQSGFFSC-------ALNGSDMLL 79
Query: 222 DEAPEL---EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
P L + V+CG H+ ++ +Y WG S GQ + + P V
Sbjct: 80 RNIPVLVIPSGVQLVTCGHSHTLVSMKDSRIYGWGYNSYGQAAN---EKSTYAWFPSPVD 136
Query: 279 ALDGIFIKDVACGGVHSCALTSKGAL 304
G ++ +A GG HS LT +L
Sbjct: 137 WCVG-EVRRLAAGGGHSAVLTDACSL 161
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 48/133 (36%), Gaps = 43/133 (32%)
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
D++CG H+ AV DG L+ WG GQLG G + G SC +
Sbjct: 31 DVSCGGVHSCAVTEDGALYAWGGGHVGQLGLGPQSG----------------FFSCALNG 74
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
+ + N P L P+ + V+CG H + +
Sbjct: 75 SDMLLR----------------------NIPVL----VIPSGVQL-VTCGHSHTLVSMKD 107
Query: 186 GLLQAWGYNEYGQ 198
+ WGYN YGQ
Sbjct: 108 SRIYGWGYNSYGQ 120
Score = 38.1 bits (87), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 35/89 (39%), Gaps = 22/89 (24%)
Query: 17 IPAKSAIYVWGYNHSGQTGR-----------KGRERQLR-IPKQLPPELFGCPAGANSRW 64
+ A+Y WG H GQ G G + LR IP + P+G
Sbjct: 42 VTEDGALYAWGGGHVGQLGLGPQSGFFSCALNGSDMLLRNIP------VLVIPSGVQL-- 93
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQ 93
+ CGH HT D ++ WG N +GQ
Sbjct: 94 --VTCGHSHTLVSMKDSRIYGWGYNSYGQ 120
>gi|326517537|dbj|BAK03687.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 235
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 166/210 (79%), Positives = 184/210 (87%)
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
YTWGLGS+GQLGH SLQSGDKEL+PRRVVAL+GI I+DV+CGGVHSCA+T GALY WGG
Sbjct: 3 YTWGLGSLGQLGHRSLQSGDKELIPRRVVALEGIVIRDVSCGGVHSCAVTEGGALYGWGG 62
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGW 369
GQLGLGPQ FS N SD RNIP+LV+P+GV+LV CGHSHTLV M+DGRI+GW
Sbjct: 63 GHVGQLGLGPQNGFFSCALNGSDMLLRNIPVLVIPSGVRLVTCGHSHTLVSMKDGRIYGW 122
Query: 370 GYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSLKELCEFRLAESV 429
GYNSYGQAANEKSTYAWYPSPVDWCVGEVR+LAAGGGHSAVL DA SLKELCEF+LAE+V
Sbjct: 123 GYNSYGQAANEKSTYAWYPSPVDWCVGEVRRLAAGGGHSAVLTDASSLKELCEFKLAETV 182
Query: 430 TLSNASEIEDVASRTGSEALARLCERLREH 459
SNA IEDVASRTG++ALARLCE+LREH
Sbjct: 183 NRSNARLIEDVASRTGADALARLCEKLREH 212
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 62/145 (42%), Gaps = 19/145 (13%)
Query: 168 IICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG-----ITCEGLQGPRVIKGYAKFLD 222
+I VSCG VH A++E G L WG GQLG G +C + G L
Sbjct: 37 VIRDVSCGGVHSCAVTEGGALYGWGGGHVGQLGLGPQNGFFSC-------ALNGSDMLLR 89
Query: 223 EAPEL---EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA 279
P L + V+CG H+ ++G +Y WG S GQ + + P V
Sbjct: 90 NIPVLVIPSGVRLVTCGHSHTLVSMKDGRIYGWGYNSYGQAAN---EKSTYAWYPSPVDW 146
Query: 280 LDGIFIKDVACGGVHSCALTSKGAL 304
G ++ +A GG HS LT +L
Sbjct: 147 CVG-EVRRLAAGGGHSAVLTDASSL 170
>gi|326512034|dbj|BAJ95998.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 247
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 166/210 (79%), Positives = 184/210 (87%)
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
YTWGLGS+GQLGH SLQSGDKEL+PRRVVAL+GI I+DV+CGGVHSCA+T GALY WGG
Sbjct: 15 YTWGLGSLGQLGHRSLQSGDKELIPRRVVALEGIVIRDVSCGGVHSCAVTEGGALYGWGG 74
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGW 369
GQLGLGPQ FS N SD RNIP+LV+P+GV+LV CGHSHTLV M+DGRI+GW
Sbjct: 75 GHVGQLGLGPQNGFFSCALNGSDMLLRNIPVLVIPSGVRLVTCGHSHTLVSMKDGRIYGW 134
Query: 370 GYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSLKELCEFRLAESV 429
GYNSYGQAANEKSTYAWYPSPVDWCVGEVR+LAAGGGHSAVL DA SLKELCEF+LAE+V
Sbjct: 135 GYNSYGQAANEKSTYAWYPSPVDWCVGEVRRLAAGGGHSAVLTDASSLKELCEFKLAETV 194
Query: 430 TLSNASEIEDVASRTGSEALARLCERLREH 459
SNA IEDVASRTG++ALARLCE+LREH
Sbjct: 195 NRSNARLIEDVASRTGADALARLCEKLREH 224
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 62/145 (42%), Gaps = 19/145 (13%)
Query: 168 IICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG-----ITCEGLQGPRVIKGYAKFLD 222
+I VSCG VH A++E G L WG GQLG G +C + G L
Sbjct: 49 VIRDVSCGGVHSCAVTEGGALYGWGGGHVGQLGLGPQNGFFSC-------ALNGSDMLLR 101
Query: 223 EAPEL---EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA 279
P L + V+CG H+ ++G +Y WG S GQ + + P V
Sbjct: 102 NIPVLVIPSGVRLVTCGHSHTLVSMKDGRIYGWGYNSYGQAAN---EKSTYAWYPSPVDW 158
Query: 280 LDGIFIKDVACGGVHSCALTSKGAL 304
G ++ +A GG HS LT +L
Sbjct: 159 CVG-EVRRLAAGGGHSAVLTDASSL 182
>gi|149392741|gb|ABR26173.1| regulator of chromosome condensation (rcc1) family protein [Oryza
sativa Indica Group]
Length = 198
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 137/176 (77%), Positives = 153/176 (86%)
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
I+DV+CGGVHSCA+T GALYAWGG GQLGLGPQ+ FS N SD RNIP+LV+
Sbjct: 1 VIRDVSCGGVHSCAVTEDGALYAWGGGHVGQLGLGPQSGFFSCALNGSDMLLRNIPVLVI 60
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 403
P+GVQLV CGHSHTLV M+D RI+GWGYNSYGQAANEKSTYAW+PSPVDWCVGEVR+LAA
Sbjct: 61 PSGVQLVTCGHSHTLVSMKDSRIYGWGYNSYGQAANEKSTYAWFPSPVDWCVGEVRRLAA 120
Query: 404 GGGHSAVLADACSLKELCEFRLAESVTLSNASEIEDVASRTGSEALARLCERLREH 459
GGGHSAVL DACSLKELCEF+LAE+V +SNA IEDVASRTG +ALARLCE+LREH
Sbjct: 121 GGGHSAVLTDACSLKELCEFKLAETVNMSNALLIEDVASRTGGDALARLCEKLREH 176
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 62/145 (42%), Gaps = 19/145 (13%)
Query: 168 IICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG-----ITCEGLQGPRVIKGYAKFLD 222
+I VSCG VH A++E G L AWG GQLG G +C + G L
Sbjct: 1 VIRDVSCGGVHSCAVTEDGALYAWGGGHVGQLGLGPQSGFFSC-------ALNGSDMLLR 53
Query: 223 EAPEL---EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA 279
P L + V+CG H+ ++ +Y WG S GQ + + P V
Sbjct: 54 NIPVLVIPSGVQLVTCGHSHTLVSMKDSRIYGWGYNSYGQAAN---EKSTYAWFPSPVDW 110
Query: 280 LDGIFIKDVACGGVHSCALTSKGAL 304
G ++ +A GG HS LT +L
Sbjct: 111 CVG-EVRRLAAGGGHSAVLTDACSL 134
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 48/133 (36%), Gaps = 43/133 (32%)
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
D++CG H+ AV DG L+ WG GQLG G + G SC +
Sbjct: 4 DVSCGGVHSCAVTEDGALYAWGGGHVGQLGLGPQSGF----------------FSCALNG 47
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
+ + N P L P+ + V+CG H + +
Sbjct: 48 SDMLLR----------------------NIPVL----VIPSGVQ-LVTCGHSHTLVSMKD 80
Query: 186 GLLQAWGYNEYGQ 198
+ WGYN YGQ
Sbjct: 81 SRIYGWGYNSYGQ 93
Score = 38.5 bits (88), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 43/120 (35%), Gaps = 22/120 (18%)
Query: 17 IPAKSAIYVWGYNHSGQTGR-----------KGRERQLR-IPKQLPPELFGCPAGANSRW 64
+ A+Y WG H GQ G G + LR IP + P+G
Sbjct: 15 VTEDGALYAWGGGHVGQLGLGPQSGFFSCALNGSDMLLRNIP------VLVIPSGVQL-- 66
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
+ CGH HT D ++ WG N +GQ + P V E + + G H
Sbjct: 67 --VTCGHSHTLVSMKDSRIYGWGYNSYGQAANEKSTYAWFPSPVDWCVGEVRRLAAGGGH 124
>gi|338534909|ref|YP_004668243.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
gi|337261005|gb|AEI67165.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
Length = 862
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 136/398 (34%), Positives = 189/398 (47%), Gaps = 59/398 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G R +L P Q+P L G A IA G HT AV DGT
Sbjct: 278 VWAWGDNVWGQLGDGTRTDRL-TPVQVP-GLSGVTA--------IAEGRRHTFAVRQDGT 327
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG N +GQLGDGT R P +V L S V +I+ G + T A+ DGT+
Sbjct: 328 VWAWGLNFWGQLGDGTRSDRLTPVQVPDLTS--VTAIAAGDYHTLAV----RQDGTV--- 378
Query: 143 RLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
W WG N G+ RL T + ++ G H VA+ + G + AWG N +
Sbjct: 379 --WAWGDNVWGQLGDGTYTDRLTPVQVPGLTGVTAIAAGESHTVAMRQDGTVWAWGDNVW 436
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG G + L +V P+L +T ++ G+YH+ AV ++G V WG +
Sbjct: 437 GQLGDGTYTDRLTPVQV-----------PDLTSVTAIAAGDYHTLAVRQDGTVCAWGFNA 485
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFI-KDVACGGVHSCALTSKGALYAWGGSQAGQL 315
GQLG + + P V L G+ + +A G H+ A+ G ++AWG + +GQL
Sbjct: 486 YGQLGDGT---SSRSPSPVMVPGLTGVTVFAALAAGDSHTVAVMQDGTVWAWGLNASGQL 542
Query: 316 GLGPQTRSFSLIPNESDTYFRNIPILVVPN--GVQLVACGHSHTLVYMRDGRIHGWGYNS 373
G G T R IP+ + P GV +A G +HTL +DG + WG NS
Sbjct: 543 GDGA-------------TIDRRIPVQI-PGLAGVTAIAAGSAHTLAAGQDGAVWSWGANS 588
Query: 374 YGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
YGQ + +T+ P V G V +AAG HS L
Sbjct: 589 YGQLGDGTTTHRLSPVQVPGLTG-VSAMAAGDAHSVAL 625
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 132/407 (32%), Positives = 186/407 (45%), Gaps = 72/407 (17%)
Query: 1 MDINEIIGETA-----RPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFG 55
+ + E+ G TA R + ++ WG N GQ G R +L P Q+P L G
Sbjct: 151 VQLPELTGVTAIAAGRRHTFAVRQDGTVWAWGDNAWGQLGDGTRTNRL-TPVQVP-GLTG 208
Query: 56 CPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
A IA G HT AV DGT++ WG N GQLGDGT R P +V L
Sbjct: 209 VTA--------IAAGDYHTLAVRQDGTVWAWGNNALGQLGDGTYTERLTPVQVPGLTG-- 258
Query: 116 VKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTI- 168
V +IS G T A+ DGT+ W WG N G+ RL TP +
Sbjct: 259 VTAISAGESHTVAV----RQDGTV-----WAWGDNVWGQLGDGTRTDRL-----TPVQVP 304
Query: 169 ----ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
+ ++ G H A+ + G + AWG N +GQLG G + L +V
Sbjct: 305 GLSGVTAIAEGRRHTFAVRQDGTVWAWGLNFWGQLGDGTRSDRLTPVQV----------- 353
Query: 225 PELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF 284
P+L +T ++ G+YH+ AV ++G V+ WG GQLG + L P +V L G+
Sbjct: 354 PDLTSVTAIAAGDYHTLAVRQDGTVWAWGDNVWGQLGDGTYT---DRLTPVQVPGLTGV- 409
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP 344
+A G H+ A+ G ++AWG + GQLG G T + + +P L
Sbjct: 410 -TAIAAGESHTVAMRQDGTVWAWGDNVWGQLGDGTYTDRLTPV---------QVPDL--- 456
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
V +A G HTL +DG + WG+N+YGQ + S+ + PSPV
Sbjct: 457 TSVTAIAAGDYHTLAVRQDGTVCAWGFNAYGQLGDGTSSRS--PSPV 501
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 130/382 (34%), Positives = 179/382 (46%), Gaps = 59/382 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N SGQ G G RIP Q+P L G A IA G HT A DG
Sbjct: 531 VWAWGLNASGQLG-DGATIDRRIPVQIP-GLAGVTA--------IAAGSAHTLAAGQDGA 580
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGTIST 141
+++WGAN +GQLGDGT R P +V L V +++ G AH A + DGT+S
Sbjct: 581 VWSWGANSYGQLGDGTTTHRLSPVQVPGLTG--VSAMAAGDAHSVALL-----QDGTVSA 633
Query: 142 SRLWVWGQ-NQGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECGLLQAWGYNE 195
WGQ G+ RL TP + + V+ GS+H VAL + G + AWGYN+
Sbjct: 634 WGRNSWGQLGDGTTAARL-----TPVQVHGLTGVTAVAAGSLHTVALRQDGTVWAWGYND 688
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
GQLG G T L P ++G L +T ++ G +H+ AV ++G V+ WG
Sbjct: 689 LGQLGDGTTTRRLA-PVQVQG----------LTDVTAIAAGYFHTVAVRQDGTVWAWGYN 737
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
GQLG S + P +V L G+ +A G H+ A+ G ++AWG + QL
Sbjct: 738 LWGQLGDGSSTA---RSTPVQVQELTGV--SALAAGYAHTVAVKQDGTVWAWGNNSGTQL 792
Query: 316 GLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
G G T ++ + E T GV + G HT +G WG N++G
Sbjct: 793 GNGSSTDRYTPVWVEGLT------------GVSALTAGRFHTAAVSPEGFGWAWGRNNFG 840
Query: 376 QAANEKSTYAWYPSPVDWCVGE 397
Q + T A P PVD + E
Sbjct: 841 QVGD--GTTADRPRPVDVVIQE 860
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 132/395 (33%), Positives = 182/395 (46%), Gaps = 56/395 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G G + P Q+P L G A IA G HT AV+ DGT
Sbjct: 78 VWAWGLNVWGQLG-DGTHTERHTPVQVP-GLTGVTA--------IAAGRRHTFAVSQDGT 127
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG N++GQLGDGT R P ++ +L V +I+ G T A+ DGT+
Sbjct: 128 VWAWGDNDWGQLGDGTRADRHTPVQLPELTG--VTAIAAGRRHTFAV----RQDGTV--- 178
Query: 143 RLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
W WG N G+ RL T + ++ G H +A+ + G + AWG N
Sbjct: 179 --WAWGDNAWGQLGDGTRTNRLTPVQVPGLTGVTAIAAGDYHTLAVRQDGTVWAWGNNAL 236
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG G E L +V P L +T +S GE H+ AV ++G V+ WG
Sbjct: 237 GQLGDGTYTERLTPVQV-----------PGLTGVTAISAGESHTVAVRQDGTVWAWGDNV 285
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
GQLG + L P +V L G + +A G H+ A+ G ++AWG + GQLG
Sbjct: 286 WGQLGDGTRT---DRLTPVQVPGLSG--VTAIAEGRRHTFAVRQDGTVWAWGLNFWGQLG 340
Query: 317 LGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
G TRS L P + +P L V +A G HTL +DG + WG N +GQ
Sbjct: 341 DG--TRSDRLTPVQ-------VPDL---TSVTAIAAGDYHTLAVRQDGTVWAWGDNVWGQ 388
Query: 377 AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
+ T P V G V +AAG H+ +
Sbjct: 389 LGDGTYTDRLTPVQVPGLTG-VTAIAAGESHTVAM 422
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 119/359 (33%), Positives = 171/359 (47%), Gaps = 55/359 (15%)
Query: 24 YVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTL 83
+ WG N GQ G R +L P Q+P L G A +A G HT AV DGT+
Sbjct: 29 WAWGNNAWGQLGDGTRTDRL-TPVQVP-GLTGVTA--------VAAGRHHTFAVRQDGTV 78
Query: 84 FTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSR 143
+ WG N +GQLGDGT R P +V L V +I+ G T A+++ DGT+
Sbjct: 79 WAWGLNVWGQLGDGTHTERHTPVQVPGLTG--VTAIAAGRRHTFAVSQ----DGTV---- 128
Query: 144 LWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
W WG N G+ R T + ++ G H A+ + G + AWG N +G
Sbjct: 129 -WAWGDNDWGQLGDGTRADRHTPVQLPELTGVTAIAAGRRHTFAVRQDGTVWAWGDNAWG 187
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG G L +V P L +T ++ G+YH+ AV ++G V+ WG ++
Sbjct: 188 QLGDGTRTNRLTPVQV-----------PGLTGVTAIAAGDYHTLAVRQDGTVWAWGNNAL 236
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG + + L P +V L G + ++ G H+ A+ G ++AWG + GQLG
Sbjct: 237 GQLGDGTYT---ERLTPVQVPGLTG--VTAISAGESHTVAVRQDGTVWAWGDNVWGQLGD 291
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
G TR+ L P + +P L +GV +A G HT +DG + WG N +GQ
Sbjct: 292 G--TRTDRLTPVQ-------VPGL---SGVTAIAEGRRHTFAVRQDGTVWAWGLNFWGQ 338
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 128/395 (32%), Positives = 180/395 (45%), Gaps = 53/395 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G +L P Q+P L G A IA G HT A+ DGT
Sbjct: 378 VWAWGDNVWGQLGDGTYTDRL-TPVQVP-GLTGVTA--------IAAGESHTVAMRQDGT 427
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG N +GQLGDGT R P +V L S V +I+ G + T A+ DGT+
Sbjct: 428 VWAWGDNVWGQLGDGTYTDRLTPVQVPDLTS--VTAIAAGDYHTLAV----RQDGTVCAW 481
Query: 143 RLWVWGQ-----NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
+GQ + S P + G T T+ ++ G H VA+ + G + AWG N G
Sbjct: 482 GFNAYGQLGDGTSSRSPSPVMVPG-LTGVTVFAALAAGDSHTVAVMQDGTVWAWGLNASG 540
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG G T + + + P L +T ++ G H+ A ++G V++WG S
Sbjct: 541 QLGDGATID-----------RRIPVQIPGLAGVTAIAAGSAHTLAAGQDGAVWSWGANSY 589
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG + L P +V L G + +A G HS AL G + AWG + GQLG
Sbjct: 590 GQLGDGTTT---HRLSPVQVPGLTG--VSAMAAGDAHSVALLQDGTVSAWGRNSWGQLG- 643
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+ T R P+ V GV VA G HT+ +DG + WGYN GQ
Sbjct: 644 ------------DGTTAARLTPVQVHGLTGVTAVAAGSLHTVALRQDGTVWAWGYNDLGQ 691
Query: 377 AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
+ +T P V + +V +AAG H+ +
Sbjct: 692 LGDGTTTRRLAPVQVQ-GLTDVTAIAAGYFHTVAV 725
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 126/394 (31%), Positives = 178/394 (45%), Gaps = 55/394 (13%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFT 85
WG+N GQ G R + P L G A +A G HT AV DGT++
Sbjct: 481 WGFNAYGQLGDGTSSRSPS--PVMVPGLTGVTVFAA-----LAAGDSHTVAVMQDGTVWA 533
Query: 86 WGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLW 145
WG N GQLGDG R+ P ++ L V +I+ G+ T A + DG + W
Sbjct: 534 WGLNASGQLGDGATIDRRIPVQIPGLAG--VTAIAAGSAHTLAAGQ----DGAV-----W 582
Query: 146 VWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
WG N G+ RL T + ++ G H VAL + G + AWG N +GQL
Sbjct: 583 SWGANSYGQLGDGTTTHRLSPVQVPGLTGVSAMAAGDAHSVALLQDGTVSAWGRNSWGQL 642
Query: 200 GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ 259
G G T L P + G L +T V+ G H+ A+ ++G V+ WG +GQ
Sbjct: 643 GDGTTAARLT-PVQVHG----------LTGVTAVAAGSLHTVALRQDGTVWAWGYNDLGQ 691
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LG + + L P +V L + +A G H+ A+ G ++AWG + GQLG G
Sbjct: 692 LGDGTTT---RRLAPVQVQGL--TDVTAIAAGYFHTVAVRQDGTVWAWGYNLWGQLGDGS 746
Query: 320 QTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
T R+ P+ V GV +A G++HT+ +DG + WG NS Q
Sbjct: 747 STA-------------RSTPVQVQELTGVSALAAGYAHTVAVKQDGTVWAWGNNSGTQLG 793
Query: 379 NEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
N ST + P V+ G V L AG H+A ++
Sbjct: 794 NGSSTDRYTPVWVEGLTG-VSALTAGRFHTAAVS 826
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/321 (32%), Positives = 152/321 (47%), Gaps = 45/321 (14%)
Query: 69 CGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
G HT AV DGT + WG N +GQLGDGT R P +V L V +++ G H T A
Sbjct: 14 AGEYHTVAVRQDGTAWAWGNNAWGQLGDGTRTDRLTPVQVPGLTG--VTAVAAGRHHTFA 71
Query: 129 IAEPRENDGTISTSRLWVWGQ-NQGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVAL 182
+ DGT+ L VWGQ G++ R TP + + ++ G H A+
Sbjct: 72 V----RQDGTVWAWGLNVWGQLGDGTHTER-----HTPVQVPGLTGVTAIAAGRRHTFAV 122
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
S+ G + AWG N++GQLG G + + PEL +T ++ G H+ A
Sbjct: 123 SQDGTVWAWGDNDWGQLGDGTRAD-----------RHTPVQLPELTGVTAIAAGRRHTFA 171
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
V ++G V+ WG + GQLG + L P +V L G + +A G H+ A+ G
Sbjct: 172 VRQDGTVWAWGDNAWGQLGDGTRT---NRLTPVQVPGLTG--VTAIAAGDYHTLAVRQDG 226
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++AWG + GQLG G T + + +P L GV ++ G SHT+ +
Sbjct: 227 TVWAWGNNALGQLGDGTYTERLTPV---------QVPGL---TGVTAISAGESHTVAVRQ 274
Query: 363 DGRIHGWGYNSYGQAANEKST 383
DG + WG N +GQ + T
Sbjct: 275 DGTVWAWGDNVWGQLGDGTRT 295
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 29/242 (11%)
Query: 167 TIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPE 226
T + + G H VA+ + G AWG N +GQLG G + L +V P
Sbjct: 7 TGVTATTAGEYHTVAVRQDGTAWAWGNNAWGQLGDGTRTDRLTPVQV-----------PG 55
Query: 227 LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
L +T V+ G +H+ AV ++G V+ WGL GQLG + + P +V L G +
Sbjct: 56 LTGVTAVAAGRHHTFAVRQDGTVWAWGLNVWGQLGDGTHT---ERHTPVQVPGLTG--VT 110
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
+A G H+ A++ G ++AWG + GQLG G TR+ P + +P L G
Sbjct: 111 AIAAGRRHTFAVSQDGTVWAWGDNDWGQLGDG--TRADRHTPVQ-------LPEL---TG 158
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGG 406
V +A G HT +DG + WG N++GQ + T P V G V +AAG
Sbjct: 159 VTAIAAGRRHTFAVRQDGTVWAWGDNAWGQLGDGTRTNRLTPVQVPGLTG-VTAIAAGDY 217
Query: 407 HS 408
H+
Sbjct: 218 HT 219
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 74/154 (48%), Gaps = 17/154 (11%)
Query: 223 EAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG 282
+ P L +T + GEYH+ AV ++G + WG + GQLG + L P +V L G
Sbjct: 2 QVPGLTGVTATTAGEYHTVAVRQDGTAWAWGNNAWGQLGDGTRT---DRLTPVQVPGLTG 58
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
+ VA G H+ A+ G ++AWG + GQLG G T + + +P L
Sbjct: 59 --VTAVAAGRHHTFAVRQDGTVWAWGLNVWGQLGDGTHTERHTPV---------QVPGL- 106
Query: 343 VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
GV +A G HT +DG + WG N +GQ
Sbjct: 107 --TGVTAIAAGRRHTFAVSQDGTVWAWGDNDWGQ 138
>gi|376260724|ref|YP_005147444.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium sp. BNL1100]
gi|373944718|gb|AEY65639.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium sp. BNL1100]
Length = 985
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 142/437 (32%), Positives = 200/437 (45%), Gaps = 92/437 (21%)
Query: 22 AIYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
++VWG N SGQ G +R +P L G A IACG H+ A+ +D
Sbjct: 345 TVWVWGDNTSGQLGDGTTTDRNTAVPVS---GLDGVIA--------IACGVNHSMALRND 393
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
GT++TWG N FGQLGDGT+ + + L + +I+CG + A+ ++DGT+
Sbjct: 394 GTVWTWGFNAFGQLGDGTKVSKNTAVPISGLDG--IIAITCGTSHSMAL----KDDGTV- 446
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVS---------CGSVHVVALSECGLLQAW 191
W WG NQ + +L G F NT QVS CG AL G + AW
Sbjct: 447 ----WAWGDNQ---YGQLGNGTFISNTTPSQVSNLSGIKSIFCGYSTSFALKPDGTVWAW 499
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G NEYG+LG+G T RVI + E + I +S G H A+ +G V+
Sbjct: 500 GNNEYGELGKGFTT------RVI-----YPTETLNIGDIKAISIGSSHCLALKNDGTVWA 548
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG GQLG + + LP +V + G I ++ GG HS AL S G ++AWG +
Sbjct: 549 WGDNRYGQLGDGTTT---IKSLPVQVSGISG--ITAISAGGSHSLALKSDGTVWAWGQNN 603
Query: 312 AGQLGLGPQT----------------------RSFSLIPNE-------SDTYFRNIPI-- 340
GQLG G + RSF+L N+ SD+Y N+P+
Sbjct: 604 VGQLGDGTKEDRNTPVQVSELSGITVISNCIYRSFAL-KNDGTVWVWGSDSY--NLPLEK 660
Query: 341 LVVP------NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWC 394
+ +P +G+ + CG H L DG + WG N++GQ + +T P V
Sbjct: 661 MTMPIQISGLSGIIAIECGTYHNLALKNDGTVWAWGKNNFGQFGDGTTTTTNIPVQVSGL 720
Query: 395 VGEVRKLAAGGGHSAVL 411
G V+ +A GG S L
Sbjct: 721 SG-VKAIAVGGNRSIAL 736
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 130/401 (32%), Positives = 190/401 (47%), Gaps = 56/401 (13%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + ++ WG N GQ G +L P Q+ L G A I+ G+ H+ A
Sbjct: 240 LKSDGTVWTWGENDYGQLGDGTTATRLS-PVQVQ-NLSGIIA--------ISSGNSHSLA 289
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DGT++ WG NE GQLGDGT + P +V+ L + SISCG + + A+ +ND
Sbjct: 290 LKDDGTVWAWGDNESGQLGDGTTNSKYIPSQVQGLSG--IVSISCGFYYSMAL----KND 343
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
GT+ WVWG N G+ R + + ++CG H +AL G +
Sbjct: 344 GTV-----WVWGDNTSGQLGDGTTTDRNTAVPVSGLDGVIAIACGVNHSMALRNDGTVWT 398
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG+N +GQLG G +V K A + L+ I ++CG HS A+ ++G V+
Sbjct: 399 WGFNAFGQLG--------DGTKVSKNTAVPI---SGLDGIIAITCGTSHSMALKDDGTVW 447
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
WG GQLG+ + S P +V L GI K + CG S AL G ++AWG +
Sbjct: 448 AWGDNQYGQLGNGTFIS---NTTPSQVSNLSGI--KSIFCGYSTSFALKPDGTVWAWGNN 502
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWG 370
+ G+LG G TR + P E+ NI ++ ++ G SH L DG + WG
Sbjct: 503 EYGELGKGFTTRV--IYPTET----LNI------GDIKAISIGSSHCLALKNDGTVWAWG 550
Query: 371 YNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
N YGQ + +T P V G + ++AGG HS L
Sbjct: 551 DNRYGQLGDGTTTIKSLPVQVSGISG-ITAISAGGSHSLAL 590
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 183/385 (47%), Gaps = 53/385 (13%)
Query: 35 GRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQL 94
G+ G + I +P E G N + I+ G ++ A+ SDGT++TWG N++GQL
Sbjct: 205 GQLGNNNTIDINSPIPVE------GLN-KVSSISAGKYYSMALKSDGTVWTWGENDYGQL 257
Query: 95 GDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSN 154
GDGT R P +V+ L + +IS G + A+ ++DGT+ W WG N+
Sbjct: 258 GDGTTATRLSPVQVQNLSG--IIAISSGNSHSLAL----KDDGTV-----WAWGDNESGQ 306
Query: 155 FPRLFWGA-FTPNTI-----ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGL 208
+ + P+ + I +SCG + +AL G + WG N GQLG G T +
Sbjct: 307 LGDGTTNSKYIPSQVQGLSGIVSISCGFYYSMALKNDGTVWVWGDNTSGQLGDGTTTDRN 366
Query: 209 QGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSG 268
V L+ + ++CG HS A+ +G V+TWG + GQLG + S
Sbjct: 367 TAVPV-----------SGLDGVIAIACGVNHSMALRNDGTVWTWGFNAFGQLGDGTKVSK 415
Query: 269 DKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIP 328
+ + + LDGI + CG HS AL G ++AWG +Q GQLG G + I
Sbjct: 416 NTAV---PISGLDGIIA--ITCGTSHSMALKDDGTVWAWGDNQYGQLGNG------TFIS 464
Query: 329 NESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYP 388
N + + N+ +G++ + CG+S + DG + WG N YG+ +T YP
Sbjct: 465 NTTPSQVSNL------SGIKSIFCGYSTSFALKPDGTVWAWGNNEYGELGKGFTTRVIYP 518
Query: 389 SPVDWCVGEVRKLAAGGGHSAVLAD 413
+ +G+++ ++ G H L +
Sbjct: 519 TET-LNIGDIKAISIGSSHCLALKN 542
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 131/479 (27%), Positives = 194/479 (40%), Gaps = 117/479 (24%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++ WG+N GQ G ++ K + G + I CG H+ A+ DG
Sbjct: 395 TVWTWGFNAFGQLGDG-----TKVSKNTAVPISGLDG-----IIAITCGTSHSMALKDDG 444
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
T++ WG N++GQLG+GT P +V L +KSI CG + T+ +P DGT+
Sbjct: 445 TVWAWGDNQYGQLGNGTFISNTTPSQVSNLSG--IKSIFCG-YSTSFALKP---DGTV-- 496
Query: 142 SRLWVWGQNQ----GSNFP-RLFWGAFTPNT-IICQVSCGSVHVVALSECGLLQAWGYNE 195
W WG N+ G F R+ + T N I +S GS H +AL G + AWG N
Sbjct: 497 ---WAWGNNEYGELGKGFTTRVIYPTETLNIGDIKAISIGSSHCLALKNDGTVWAWGDNR 553
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
YGQLG G T IK + + IT +S G HS A+ +G V+ WG
Sbjct: 554 YGQLGDGTTT--------IKSLPV---QVSGISGITAISAGGSHSLALKSDGTVWAWGQN 602
Query: 256 SVGQLG-----------HCSLQSG--------------------------------DKEL 272
+VGQLG S SG +K
Sbjct: 603 NVGQLGDGTKEDRNTPVQVSELSGITVISNCIYRSFALKNDGTVWVWGSDSYNLPLEKMT 662
Query: 273 LPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQT----------- 321
+P ++ L GI + CG H+ AL + G ++AWG + GQ G G T
Sbjct: 663 MPIQISGLSGIIA--IECGTYHNLALKNDGTVWAWGKNNFGQFGDGTTTTTNIPVQVSGL 720
Query: 322 -----------RSFSLIPNESDTYFRNIPILVVPNGVQLVACGH-----------SHTLV 359
RS +L + + + I + V P+ V+ S+ +
Sbjct: 721 SGVKAIAVGGNRSIALKSDGTVWQWGRILVSVSPSTVETWTTARQVDGLSEIVSISNNVA 780
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSLK 418
DG++ WG N YGQ + +T +PV G V +A+ S VL + +++
Sbjct: 781 LKNDGKVFTWGANDYGQLGDGTTTARVTVAPVSGLEG-VAGVASSDTTSMVLMNDGTIR 838
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 155/363 (42%), Gaps = 62/363 (17%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++ WG N GQ G K LP ++ G S I+ G H+ A+ SDG
Sbjct: 545 TVWAWGDNRYGQLGDG-----TTTIKSLPVQVSGI-----SGITAISAGGSHSLALKSDG 594
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
T++ WG N GQLGDGT+E R P +V +L + IS + + A+ +NDGT+
Sbjct: 595 TVWAWGQNNVGQLGDGTKEDRNTPVQVSELSG--ITVISNCIYRSFAL----KNDGTV-- 646
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECGLLQAWGYNEY 196
WVWG + N P P I I + CG+ H +AL G + AWG N +
Sbjct: 647 ---WVWGSDS-YNLP--LEKMTMPIQISGLSGIIAIECGTYHNLALKNDGTVWAWGKNNF 700
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQ G G T P + G L + ++ G S A+ +G V+ WG
Sbjct: 701 GQFGDGTTTT-TNIPVQVSG----------LSGVKAIAVGGNRSIALKSDGTVWQWGR-- 747
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
L S + + R+V L I ++ AL + G ++ WG + GQLG
Sbjct: 748 --ILVSVSPSTVETWTTARQVDGLSEIVSIS------NNVALKNDGKVFTWGANDYGQLG 799
Query: 317 LGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
G T ++ P GV VA + ++V M DG I WG N++GQ
Sbjct: 800 DGTTTARVTVAPVSG------------LEGVAGVASSDTTSMVLMNDGTIRAWGKNNFGQ 847
Query: 377 AAN 379
N
Sbjct: 848 LGN 850
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 118/243 (48%), Gaps = 29/243 (11%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I +VS G H +AL G + A G N+YGQLG T + + P ++G L
Sbjct: 177 IIKVSGGESHTLALESDGTVWACGENDYGQLGNNNTID-INSPIPVEG----------LN 225
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
K++ +S G+Y+S A+ +G V+TWG GQLG + + L P +V L GI +
Sbjct: 226 KVSSISAGKYYSMALKSDGTVWTWGENDYGQLGDGTTAT---RLSPVQVQNLSGIIA--I 280
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
+ G HS AL G ++AWG +++GQLG G + IP++ +G+
Sbjct: 281 SSGNSHSLALKDDGTVWAWGDNESGQLGDGTTNSKY--IPSQVQGL----------SGIV 328
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
++CG +++ DG + WG N+ GQ + +T PV G V +A G HS
Sbjct: 329 SISCGFYYSMALKNDGTVWVWGDNTSGQLGDGTTTDRNTAVPVSGLDG-VIAIACGVNHS 387
Query: 409 AVL 411
L
Sbjct: 388 MAL 390
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 80/199 (40%), Gaps = 46/199 (23%)
Query: 48 QLPPELFGCPAGAN--SRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHP 105
LP E P + S + I CG H A+ +DGT++ WG N FGQ GDGT P
Sbjct: 655 NLPLEKMTMPIQISGLSGIIAIECGTYHNLALKNDGTVWAWGKNNFGQFGDGTTTTTNIP 714
Query: 106 EKVKQLQSEFVKSISCGAHCTAAI------------------------AEPRENDG---- 137
+V L VK+I+ G + + A+ R+ DG
Sbjct: 715 VQVSGLSG--VKAIAVGGNRSIALKSDGTVWQWGRILVSVSPSTVETWTTARQVDGLSEI 772
Query: 138 -TISTS-------RLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALS 183
+IS + +++ WG N G+ R+ + + V+ + L
Sbjct: 773 VSISNNVALKNDGKVFTWGANDYGQLGDGTTTARVTVAPVSGLEGVAGVASSDTTSMVLM 832
Query: 184 ECGLLQAWGYNEYGQLGRG 202
G ++AWG N +GQLG G
Sbjct: 833 NDGTIRAWGKNNFGQLGNG 851
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 54/137 (39%), Gaps = 25/137 (18%)
Query: 10 TARPVD----------NIPAKS--AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCP 57
TAR VD N+ K+ ++ WG N GQ G ++ + P
Sbjct: 762 TARQVDGLSEIVSISNNVALKNDGKVFTWGANDYGQLGDGTTTARVTVA---PVSGLEGV 818
Query: 58 AGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVK 117
AG +A + + +DGT+ WG N FGQLG+G R + +
Sbjct: 819 AG-------VASSDTTSMVLMNDGTIRAWGKNNFGQLGNGE---RGFYDYAEYSFGSTNG 868
Query: 118 SISCGAHCTAAIAEPRE 134
+I A CTA + RE
Sbjct: 869 AIPISASCTAVCTKDRE 885
>gi|301106605|ref|XP_002902385.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262098259|gb|EEY56311.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 545
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 133/436 (30%), Positives = 204/436 (46%), Gaps = 58/436 (13%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLR-IPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
+Y WG GQ G Q R +P A A R + IACG HT + +
Sbjct: 2 TVYSWGRGEDGQLGLGDTSDQHRPVP---------IDALAERRIVQIACGSGHTVVLTEE 52
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G ++TWG + G+LG G + P V++L+ + ++ ++CG++ TAA+ T+S
Sbjct: 53 GEVYTWGRGDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAV--------TVS 104
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFTPNTI-----------ICQVSCGSVHVVALSECGLLQ 189
L+ WG G + +L G T ++ + QV+CGS H V L E +
Sbjct: 105 -GDLYTWG---GGMYGKLGHGNETGHSTPYLVETLKSMQVRQVACGSRHTVVLLENKDVY 160
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
WG E G G G T EG Q Y E + I Q+S +H+AA+SE GEV
Sbjct: 161 TWGDKENGVSGHGDT-EGHQ-------YLPCPVEELRGKSIVQISACGFHTAALSEFGEV 212
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
+T+G G G+LGH S ++ + + R V AL G +K VACGG H+ A+T G +Y WGG
Sbjct: 213 FTFGEGKFGRLGHNSERN---QPVARFVDALAGKRVKQVACGGFHTAAVTETGEVYTWGG 269
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGW 369
+ GQLG G + +P ++ + V + CG SHT+ G ++ W
Sbjct: 270 GEHGQLGHGDKVN--KTVPTRVESLLEKL--------VLQITCGWSHTVTLTDTGEVYTW 319
Query: 370 GYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADACSL---KELCEFRL 425
G +G+ + + P PVD G+ V +A+ H+ L D ++ L +
Sbjct: 320 GNGDHGKLGHNDTAKVTLPKPVDVLDGKRVISVASYNEHTVALVDPVAMLRASMLTSSYV 379
Query: 426 AESVTLSNASEIEDVA 441
+ L +++E DV
Sbjct: 380 GDMRQLIDSAEFSDVT 395
>gi|348687440|gb|EGZ27254.1| hypothetical protein PHYSODRAFT_358246 [Phytophthora sojae]
Length = 545
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 135/436 (30%), Positives = 205/436 (47%), Gaps = 58/436 (13%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLR-IPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
+Y WG GQ G Q R +P A A R + IACG HT + +
Sbjct: 2 TVYSWGRGEDGQLGLGDTSDQHRPVP---------IDALAERRIVQIACGSGHTVVLTDE 52
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G ++TWG + G+LG G + P V++L+ + ++ ++CG++ TAA+ T+S
Sbjct: 53 GEVYTWGRGDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAV--------TVS 104
Query: 141 TSRLWVWGQNQGSNFPRLFWG-------AFTPNTI----ICQVSCGSVHVVALSECGLLQ 189
L+ WG G + +L G F T+ + QV+CGS H V L E +
Sbjct: 105 -GDLYTWG---GGMYGKLGHGNETGHSTPFLVETLKGMQVRQVACGSRHTVVLLENKDVY 160
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
WG E G G G T EG Q Y E + I Q+S +H+AA+SE GEV
Sbjct: 161 TWGDKENGVSGHGDT-EGHQ-------YLPCPVEELRGKNIVQISACGFHTAALSEFGEV 212
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
+T+G G G+LGH S ++ + + R V AL G +K VACGG H+ A+T G +Y WGG
Sbjct: 213 FTFGEGKFGRLGHNSERN---QPVARFVEALAGKRVKQVACGGFHTAAVTETGEVYTWGG 269
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGW 369
+ GQLG G + +P ++ +V V + CG SHT+ G ++ W
Sbjct: 270 GEHGQLGHGDKVN--KTVPTRVES--------LVEKLVVQITCGWSHTVALTDTGEVYTW 319
Query: 370 GYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADACSL---KELCEFRL 425
G +G+ + +T P VD G+ V +A+ H+ L D ++ L +
Sbjct: 320 GNGDHGKLGHNDTTKVTLPKLVDVLEGKRVISVASYNEHTVALVDPVAMLRASMLTSSYV 379
Query: 426 AESVTLSNASEIEDVA 441
+ L +++E DV
Sbjct: 380 GDMRQLIDSAEFSDVT 395
>gi|405355587|ref|ZP_11024762.1| hypothetical protein A176_0896 [Chondromyces apiculatus DSM 436]
gi|397091294|gb|EJJ22112.1| hypothetical protein A176_0896 [Myxococcus sp. (contaminant ex DSM
436)]
Length = 1473
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 122/376 (32%), Positives = 179/376 (47%), Gaps = 57/376 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG +GQ G G ER + +P + G + +A G H+ A DG+
Sbjct: 388 LWAWGGGLAGQLGHGGSERHV-----VPATVMGL-----TNVTSMATGSFHSLAALEDGS 437
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG N +GQLGDGT R P +V L S V++++ H + A+A DGT+
Sbjct: 438 VWAWGRNSYGQLGDGTVTERHVPVRVPGLPS--VRAVAAAGHHSIAVAM----DGTV--- 488
Query: 143 RLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
W WG+N G+ R A + T + ++ G HV+AL G + AWGYN
Sbjct: 489 --WTWGRNAAGQLGDGTTRDRARPVAVSGLTSVLAIAAGGSHVLALRSDGDVWAWGYNAL 546
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG G + + L RV P L I V+ G Y S A++ +G V+TWG G
Sbjct: 547 GQLGDGTSGDKLTPVRV-----------PGLAPIQSVAAGTYFSMALANDGTVWTWGEGF 595
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIF-IKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
GQLG G + L P VA+ G+ I++++ G H+ A+ G ++AWG + GQL
Sbjct: 596 EGQLGDG---GGVQRLSP---VAVKGLSDIRNISVGSAHALAVRGDGTVWAWGDNNEGQL 649
Query: 316 GLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
G G F+ + RN+ G+ V+ G SH+L DG + WG N YG
Sbjct: 650 GDGSWMDRFAPV------QVRNL------TGITAVSGGRSHSLALHADGTVRAWGSNGYG 697
Query: 376 QAANEKSTYAWYPSPV 391
Q + T PS +
Sbjct: 698 QLGDGTLTSRVLPSVI 713
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 135/406 (33%), Positives = 182/406 (44%), Gaps = 64/406 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N SGQ G E +L P+++ A S + IA G H AV DGT
Sbjct: 888 VWAWGANASGQVGDGTVEDRL-TPRRIE---------ALSDVMVIALGESHALAVGEDGT 937
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WGAN GQLGDG E P +VK L E V S++ G + A+ +DGT
Sbjct: 938 VWAWGANASGQLGDGGETPSLLPARVKGL--EGVGSVAAGRAFSLAV----RDDGTA--- 988
Query: 143 RLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
W WG N+ GSN R + VS G+ H +AL E G + AWG N
Sbjct: 989 --WAWGANESGQLGDGSNQSRRVPHRVASVKGLRAVSAGAHHAMALGEDGAVWAWGDNTL 1046
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG G + + P+ + EL + V+ GE S AV+ +G ++WG
Sbjct: 1047 GQLGDGTSAFTVMWPQRVA----------ELSDVESVAAGEQFSVAVAHDGTAFSWGSNE 1096
Query: 257 VGQLGHCSLQSGDKELLPR------RVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
GQLG D + PR ++ + V G H+ AL + G L AWG +
Sbjct: 1097 YGQLG-------DGKTGPRLSPAEVKIGGSKARTVVTVGAWGQHAVALMADGTLQAWGDN 1149
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWG 370
GQLG G TR S P E R V V+ G H+L DG + WG
Sbjct: 1150 ATGQLGDGTTTRRSS--PGEIRGVTR----------VTAVSTGAWHSLALRLDGTVWAWG 1197
Query: 371 YNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLADAC 415
N +GQ + +T P PV + +V +AAGG HS AV +D
Sbjct: 1198 ANGFGQLGDGTTTARAVPVPVQ-GLRDVVAIAAGGYHSVAVRSDGT 1242
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 117/364 (32%), Positives = 175/364 (48%), Gaps = 56/364 (15%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A++ WG N GQ G + P+++ EL + +A G + + AVA DG
Sbjct: 1037 AVWAWGDNTLGQLGDGTSAFTVMWPQRVA-ELSDVES--------VAAGEQFSVAVAHDG 1087
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA---HCTAAIAEPRENDGT 138
T F+WG+NE+GQLGDG R P +VK S+ ++ GA H A +A DGT
Sbjct: 1088 TAFSWGSNEYGQLGDGKTGPRLSPAEVKIGGSKARTVVTVGAWGQHAVALMA-----DGT 1142
Query: 139 ISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
+ WG N G+ R G T + VS G+ H +AL G + AWG
Sbjct: 1143 LQ-----AWGDNATGQLGDGTTTRRSSPGEIRGVTRVTAVSTGAWHSLALRLDGTVWAWG 1197
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
N +GQLG G T P ++G L + ++ G YHS AV +G V+TW
Sbjct: 1198 ANGFGQLGDGTTTARAV-PVPVQG----------LRDVVAIAAGGYHSVAVRSDGTVWTW 1246
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G + GQLG + +S LP +V L+G ++ V G HS AL + G + WG + +
Sbjct: 1247 GYNTFGQLGDGTSES---RALPVQVHKLEG--VQAVTGGDHHSLALHADGTVSGWGHNAS 1301
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYN 372
GQLG G +T ++ + +++ +G+ V G +HT+ +DG + WG N
Sbjct: 1302 GQLGDGSRTDRYTPV------RLKDV------DGLTEVRAGAAHTVALGKDGTVWTWGDN 1349
Query: 373 SYGQ 376
++GQ
Sbjct: 1350 AHGQ 1353
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 135/443 (30%), Positives = 191/443 (43%), Gaps = 97/443 (21%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N SGQ G G P LP + G G S +A G + AV DGT
Sbjct: 938 VWAWGANASGQLGDGGE-----TPSLLPARVKGLE-GVGS----VAAGRAFSLAVRDDGT 987
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP---------- 132
+ WGANE GQLGDG+ + R+ P +V ++ ++++S GAH A+ E
Sbjct: 988 AWAWGANESGQLGDGSNQSRRVPHRVASVKG--LRAVSAGAHHAMALGEDGAVWAWGDNT 1045
Query: 133 --RENDGTISTSRLW------------------------------VWGQNQ------GSN 154
+ DGT + + +W WG N+ G
Sbjct: 1046 LGQLGDGTSAFTVMWPQRVAELSDVESVAAGEQFSVAVAHDGTAFSWGSNEYGQLGDGKT 1105
Query: 155 FPRLF-----WGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQ 209
PRL G T++ + G H VAL G LQAWG N GQLG G T
Sbjct: 1106 GPRLSPAEVKIGGSKARTVVTVGAWGQ-HAVALMADGTLQAWGDNATGQLGDGTTTR-RS 1163
Query: 210 GPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGD 269
P I+G + ++T VS G +HS A+ +G V+ WG GQLG + +
Sbjct: 1164 SPGEIRG----------VTRVTAVSTGAWHSLALRLDGTVWAWGANGFGQLGDGTTTA-- 1211
Query: 270 KELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPN 329
+P V L + +A GG HS A+ S G ++ WG + GQLG G +
Sbjct: 1212 -RAVPVPVQGLRDVVA--IAAGGYHSVAVRSDGTVWTWGYNTFGQLGDGT---------S 1259
Query: 330 ESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYP 388
ES R +P+ V GVQ V G H+L DG + GWG+N+ GQ + T + P
Sbjct: 1260 ES----RALPVQVHKLEGVQAVTGGDHHSLALHADGTVSGWGHNASGQLGDGSRTDRYTP 1315
Query: 389 SPVDWCVGEVRKLAAGGGHSAVL 411
+ V + ++ AG H+ L
Sbjct: 1316 VRLK-DVDGLTEVRAGAAHTVAL 1337
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 120/386 (31%), Positives = 176/386 (45%), Gaps = 64/386 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++ WG N SGQ G G R + C +A G +H+
Sbjct: 782 VRADGSVVAWGANASGQLGDGGTTHGAR---AVTVRGVSCA-------RSVASGGQHSLV 831
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+A DGT++TWG N+ GQLGDGT R P +V+ L E + +++ G + A+ +D
Sbjct: 832 LACDGTVWTWGENQRGQLGDGTTSARVAPGRVEGL--EGIVAVAGGGDTSLAL----RSD 885
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSEC 185
GT+ W WG N G+ RL TP I + ++ G H +A+ E
Sbjct: 886 GTV-----WAWGANASGQVGDGTVEDRL-----TPRRIEALSDVMVIALGESHALAVGED 935
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + AWG N GQLG G L P +KG LE + V+ G S AV +
Sbjct: 936 GTVWAWGANASGQLGDGGETPSLL-PARVKG----------LEGVGSVAAGRAFSLAVRD 984
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G + WG GQLG S QS +P RV ++ G ++ V+ G H+ AL GA++
Sbjct: 985 DGTAWAWGANESGQLGDGSNQS---RRVPHRVASVKG--LRAVSAGAHHAMALGEDGAVW 1039
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG + GQLG G T +F+++ + + V+ VA G ++ DG
Sbjct: 1040 AWGDNTLGQLGDG--TSAFTVMWPQRVAELSD---------VESVAAGEQFSVAVAHDGT 1088
Query: 366 IHGWGYNSYGQAANEKSTYAWYPSPV 391
WG N YGQ + K+ P+ V
Sbjct: 1089 AFSWGSNEYGQLGDGKTGPRLSPAEV 1114
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 130/446 (29%), Positives = 183/446 (41%), Gaps = 103/446 (23%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A++ WG N +GQ G Q P +LP + + G H+ A+ +DG
Sbjct: 86 AVWAWGGNSAGQLGGADTSFQRLSPARLP---------VLEDIVSVVSGDAHSLALGADG 136
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
T++TWG+N GQLGDGT R P++V+ V +++ G + + ++DGT+
Sbjct: 137 TVWTWGSNSSGQLGDGTTTDRAEPQRVEGFTD--VVAVAAGDFHSLVL----KSDGTV-- 188
Query: 142 SRLWVWGQN------QGSNFPRLFWGAFTPNTI-ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG N QG L W P + ++ G +A+ G + +WG N
Sbjct: 189 ---WAWGTNFHGQLGQGHTQTGL-WPKPVPGLEGVVALAAGFDFTLAVHADGAVSSWGAN 244
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+GQLG G + L R+ P L IT V+ G YH+ A+ ++G V+TWG
Sbjct: 245 SFGQLGLGTFTQRLSPERI-----------PTLSGITSVAAGTYHAVALGKDGTVWTWGS 293
Query: 255 GSVGQLGH---------------------CSLQSGDKELL-------------------- 273
S GQLG SL +G LL
Sbjct: 294 NSSGQLGDGTWNDRAVPAPLPGVGGARAVASLDAGSLALLEGGDVLAWGANNSGQLGDGD 353
Query: 274 ------PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLI 327
P V L + V G H+ AL G L+AWGG AGQLG G R
Sbjct: 354 TADRSTPSLVPELS--AVTAVVGGAQHALALRKDGTLWAWGGGLAGQLGHGGSERHV--- 408
Query: 328 PNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAW 386
+P V+ V +A G H+L + DG + WG NSYGQ + T
Sbjct: 409 ----------VPATVMGLTNVTSMATGSFHSLAALEDGSVWAWGRNSYGQLGDGTVTERH 458
Query: 387 YPSPVDWCVGEVRKLAAGGGHSAVLA 412
P V + VR +AA G HS +A
Sbjct: 459 VPVRVP-GLPSVRAVAAAGHHSIAVA 483
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 133/401 (33%), Positives = 186/401 (46%), Gaps = 66/401 (16%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+++ WG N GQ G G + +P ++P G P S A GH H+ AVA DG
Sbjct: 437 SVWAWGRNSYGQLG-DGTVTERHVPVRVP----GLP----SVRAVAAAGH-HSIAVAMDG 486
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
T++TWG N GQLGDGT R P V L S V +I+ G A+ +DG +
Sbjct: 487 TVWTWGRNAAGQLGDGTTRDRARPVAVSGLTS--VLAIAAGGSHVLAL----RSDGDV-- 538
Query: 142 SRLWVWGQN------QGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECGLLQA 190
W WG N G++ +L TP + I V+ G+ +AL+ G +
Sbjct: 539 ---WAWGYNALGQLGDGTSGDKL-----TPVRVPGLAPIQSVAAGTYFSMALANDGTVWT 590
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG GQLG G + L P +KG L I +S G H+ AV +G V+
Sbjct: 591 WGEGFEGQLGDGGGVQRLS-PVAVKG----------LSDIRNISVGSAHALAVRGDGTVW 639
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
WG + GQLG S P +V L G I V+ G HS AL + G + AWG +
Sbjct: 640 AWGDNNEGQLGDGSWM---DRFAPVQVRNLTG--ITAVSGGRSHSLALHADGTVRAWGSN 694
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWG 370
GQLG G T + ++P+ IP L +G+Q + GH H L D + GWG
Sbjct: 695 GYGQLGDG--TLTSRVLPSV-------IPGL---SGIQALHPGHLHVLALHADKTLRGWG 742
Query: 371 YNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
YN +GQ + ++ P V +G V +LAAG H+ ++
Sbjct: 743 YNRFGQLGLGAAGWSARPVQVR-GIGRVERLAAGRAHALLV 782
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 116/374 (31%), Positives = 164/374 (43%), Gaps = 59/374 (15%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A + WGYN GQ G R P ++ G R +A G H V
Sbjct: 734 ADKTLRGWGYNRFGQLGLGAAGWSAR-----PVQVRGI-----GRVERLAAGRAHALLVR 783
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+DG++ WGAN GQLGDG G H + ++ +S++ G + +A DG
Sbjct: 784 ADGSVVAWGANASGQLGDG---GTTHGARAVTVRGVSCARSVASGGQHSLVLA----CDG 836
Query: 138 TISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
T+ W WG+NQ G+ R+ G I V+ G +AL G + AW
Sbjct: 837 TV-----WTWGENQRGQLGDGTTSARVAPGRVEGLEGIVAVAGGGDTSLALRSDGTVWAW 891
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G N GQ+G G T E PR I+ L + ++ GE H+ AV E+G V+
Sbjct: 892 GANASGQVGDG-TVEDRLTPRRIE----------ALSDVMVIALGESHALAVGEDGTVWA 940
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG + GQLG LLP RV L+G + VA G S A+ G +AWG ++
Sbjct: 941 WGANASGQLGDGGET---PSLLPARVKGLEG--VGSVAAGRAFSLAVRDDGTAWAWGANE 995
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWG 370
+GQLG G N+S R +P V G++ V+ G H + DG + WG
Sbjct: 996 SGQLGDG---------SNQS----RRVPHRVASVKGLRAVSAGAHHAMALGEDGAVWAWG 1042
Query: 371 YNSYGQAANEKSTY 384
N+ GQ + S +
Sbjct: 1043 DNTLGQLGDGTSAF 1056
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/308 (34%), Positives = 149/308 (48%), Gaps = 53/308 (17%)
Query: 23 IYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++ WG N GQ G R + +P Q ++ + IA G H+ AV SDG
Sbjct: 1193 VWAWGANGFGQLGDGTTTARAVPVPVQGLRDV-----------VAIAAGGYHSVAVRSDG 1241
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
T++TWG N FGQLGDGT E R P +V +L E V++++ G H + A+ DGT+S
Sbjct: 1242 TVWTWGYNTFGQLGDGTSESRALPVQVHKL--EGVQAVTGGDHHSLAL----HADGTVSG 1295
Query: 142 SRLWVWGQN------QGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECGLLQA 190
WG N GS R +TP + + +V G+ H VAL + G +
Sbjct: 1296 -----WGHNASGQLGDGSRTDR-----YTPVRLKDVDGLTEVRAGAAHTVALGKDGTVWT 1345
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG N +GQLG G+T GPR ++ K + P T + G +HS A +
Sbjct: 1346 WGDNAHGQLGDGVT-----GPR-MRLVPKPVSGLP---AATAIGAGAWHSFASGPEEGAF 1396
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
TWG S GQLG + P+R+ L G +K +A G S A+T +G L +WG S
Sbjct: 1397 TWGRNSHGQLG---VGDNAPRAEPQRMKLLSG--LKVIAGGADTSLAMTQEGVLMSWGSS 1451
Query: 311 QAGQLGLG 318
G LGLG
Sbjct: 1452 LHGTLGLG 1459
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 106/242 (43%), Gaps = 28/242 (11%)
Query: 170 CQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK 229
+++ G+ H + L+ G + AWG N GQLG T P + P LE
Sbjct: 69 MRIAAGAQHSLFLTPTGAVWAWGGNSAGQLGGADTSFQRLSPARL----------PVLED 118
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
I V G+ HS A+ +G V+TWG S GQLG + P+RV + VA
Sbjct: 119 IVSVVSGDAHSLALGADGTVWTWGSNSSGQLGDGTTT---DRAEPQRVEGFTDVVA--VA 173
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
G HS L S G ++AWG + GQLG G ++ + + +P L GV
Sbjct: 174 AGDFHSLVLKSDGTVWAWGTNFHGQLGQG---------HTQTGLWPKPVPGL---EGVVA 221
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
+A G TL DG + WG NS+GQ T P + G + +AAG H+
Sbjct: 222 LAAGFDFTLAVHADGAVSSWGANSFGQLGLGTFTQRLSPERIPTLSG-ITSVAAGTYHAV 280
Query: 410 VL 411
L
Sbjct: 281 AL 282
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 92/204 (45%), Gaps = 29/204 (14%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A + WG+N SGQ G R + P +L ++ G ++ G HT A+
Sbjct: 1289 ADGTVSGWGHNASGQLGDGSRTDRY-TPVRLK-DVDGL--------TEVRAGAAHTVALG 1338
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKH--PEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
DGT++TWG N GQLGDG R P+ V L + +I GA + A + P E
Sbjct: 1339 KDGTVWTWGDNAHGQLGDGVTGPRMRLVPKPVSGLPA--ATAIGAGAWHSFA-SGPEEGA 1395
Query: 137 GTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
T WG+N G N PR + + ++ G+ +A+++ G+L +
Sbjct: 1396 FT--------WGRNSHGQLGVGDNAPRAEPQRMKLLSGLKVIAGGADTSLAMTQEGVLMS 1447
Query: 191 WGYNEYGQLGRGITCEGLQGPRVI 214
WG + +G LG G+ + RV+
Sbjct: 1448 WGSSLHGTLGLGVLGQRASPGRVL 1471
>gi|348688336|gb|EGZ28150.1| hypothetical protein PHYSODRAFT_321832 [Phytophthora sojae]
Length = 423
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 133/427 (31%), Positives = 188/427 (44%), Gaps = 77/427 (18%)
Query: 22 AIYVWGYNHSGQTGRKGRERQL---------RIPKQLPPELFGCPAGANSRWLDIACGHE 72
A+ +G N GQ G + R PKQL L + ++CG
Sbjct: 11 AVVAFGCNDDGQLGTGAKRRPTLAIDDVSASNFPKQLGGLL-------GEEIVAVSCGSR 63
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKS--ISCGAHCTAAIA 130
HT A+ + G +++WG GQLG G + P+K+ + E +K +SCG +AA+
Sbjct: 64 HTMALTASGAVYSWGWGSMGQLGHGDLKSINVPQKIAFFEQEGLKVDYVSCGGCHSAAVT 123
Query: 131 EPRENDGTISTSRLWVWGQNQGSNF--PRLFWGAFTPNTIIC------------QVSCGS 176
NDGT L++WG+ P+ F A + C +VSCG
Sbjct: 124 ----NDGT-----LYMWGETHWGQLGLPKEFEAAHESFPVKCPLLEGVADESVVKVSCGG 174
Query: 177 VHVVALSECGLLQAWGYNEYGQLGRGIT---------CEGLQGPRVIKGYAKFLDEAPEL 227
H AL+ G + WG + GQLG G G+ P +++G+
Sbjct: 175 THTAALTNLGRVYVWGRGDSGQLGIGSAWLKDTDDNGLLGVSRPHLVEGFNG-------- 226
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
EK+ QV+CG +HSAAV+E G VY WG G LG Q+ D++ P+RV D I
Sbjct: 227 EKVVQVACGAFHSAAVTEQGHVYIWGKEDYGMLG--VGQTSDQQ-TPKRVEFFDDIPALR 283
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
V+CGG H+ + G YA+G + G+LGLG DT R P LV
Sbjct: 284 VSCGGWHTMVVAKSGDCYAFGRGEYGRLGLG-------------DTKSRTRPHLVKALKG 330
Query: 348 QLV---ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAG 404
Q V ACG SHTL DG + G +G+ P+ +D VR+++AG
Sbjct: 331 QTVIQAACGGSHTLFVTSDGIAYVAGRPDHGRLGMTDMKPLSVPTRLDLGPIPVRQVSAG 390
Query: 405 GGHSAVL 411
G HS L
Sbjct: 391 GAHSMAL 397
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 113/372 (30%), Positives = 173/372 (46%), Gaps = 48/372 (12%)
Query: 11 ARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACG 70
+R + A A+Y WG+ GQ G G + + +P+++ F G + ++CG
Sbjct: 62 SRHTMALTASGAVYSWGWGSMGQLGH-GDLKSINVPQKIA---FFEQEGLKVDY--VSCG 115
Query: 71 HEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKH---PEKVKQLQ---SEFVKSISCGAH 124
H+AAV +DGTL+ WG +GQLG E H P K L+ E V +SCG
Sbjct: 116 GCHSAAVTNDGTLYMWGETHWGQLGLPKEFEAAHESFPVKCPLLEGVADESVVKVSCGGT 175
Query: 125 CTAAIAE-------PRENDGTISTSRLWVWGQNQ----GSNFPRLFWGAFTPNTIICQVS 173
TAA+ R + G + W+ + G + P L G F ++ QV+
Sbjct: 176 HTAALTNLGRVYVWGRGDSGQLGIGSAWLKDTDDNGLLGVSRPHLVEG-FNGEKVV-QVA 233
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
CG+ H A++E G + WG +YG LG G T + RV +F D+ P L +V
Sbjct: 234 CGAFHSAAVTEQGHVYIWGKEDYGMLGVGQTSDQQTPKRV-----EFFDDIPAL----RV 284
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
SCG +H+ V+++G+ Y +G G G+LG +S + P V AL G + ACGG
Sbjct: 285 SCGGWHTMVVAKSGDCYAFGRGEYGRLGLGDTKSRTR---PHLVKALKGQTVIQAACGGS 341
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG 353
H+ +TS G Y G G+LG+ + S +P D + P V+ V+ G
Sbjct: 342 HTLFVTSDGIAYVAGRPDHGRLGM-TDMKPLS-VPTRLD---------LGPIPVRQVSAG 390
Query: 354 HSHTLVYMRDGR 365
+H++ R
Sbjct: 391 GAHSMALTHSSR 402
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 105/208 (50%), Gaps = 33/208 (15%)
Query: 183 SECGLLQAWGYNEYGQLGRG------ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG 236
+EC ++ A+G N+ GQLG G + + + K L E +I VSCG
Sbjct: 8 TECAVV-AFGCNDDGQLGTGAKRRPTLAIDDVSASNFPKQLGGLLGE-----EIVAVSCG 61
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL--DGIFIKDVACGGVH 294
H+ A++ +G VY+WG GS+GQLGH L+S + +P+++ +G+ + V+CGG H
Sbjct: 62 SRHTMALTASGAVYSWGWGSMGQLGHGDLKSIN---VPQKIAFFEQEGLKVDYVSCGGCH 118
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL------VVPNGVQ 348
S A+T+ G LY WG + GQLGL P E + + P+ V V
Sbjct: 119 SAAVTNDGTLYMWGETHWGQLGL----------PKEFEAAHESFPVKCPLLEGVADESVV 168
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
V+CG +HT GR++ WG GQ
Sbjct: 169 KVSCGGTHTAALTNLGRVYVWGRGDSGQ 196
>gi|301117316|ref|XP_002906386.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262107735|gb|EEY65787.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 419
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 130/414 (31%), Positives = 189/414 (45%), Gaps = 53/414 (12%)
Query: 23 IYVWGYNHSGQTGRKGRER-QLRI----PKQLPPELFGCPAGANSRWLDIACGHEHTAAV 77
+ +G N GQ G + R L I P ++ P + + ++CG HT A+
Sbjct: 8 VTAFGCNDDGQLGTGAKRRPTLAIDDVSASNFPQQIGNLP---DEDIVAVSCGSRHTMAL 64
Query: 78 ASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF--VKSISCGAHCTAAIAEPREN 135
S G +++WG GQLG G + P+K+ + E V ISCG +AA+ +
Sbjct: 65 TSSGAVYSWGWGSMGQLGHGDLKIINEPQKIAFFEQERLEVDYISCGGCHSAAVTK---- 120
Query: 136 DGTISTSRLWVWGQNQGSNF--PRLFWGAFTPNTIIC------------QVSCGSVHVVA 181
DGT L+VWG++ P+ + A + C +VSCG H A
Sbjct: 121 DGT-----LYVWGESHWGQLGLPKEYEAAHESLPVKCPMPEGEAGETIVKVSCGGTHTAA 175
Query: 182 LSECGLLQAWGYNEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
L+ G + WG + GQLG G + + + ++ L +A EK+ QV+CG +HS
Sbjct: 176 LTSFGRVYVWGRGDSGQLGIGSVWMKDPENESLMGASRPHLLKAFNGEKVVQVACGAFHS 235
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
AAV+E G VY WG G LG QS D++ +P+R+ D I + V+CGG H+ +
Sbjct: 236 AAVTEQGHVYVWGKEDYGMLG--VGQSSDQQ-IPKRLEYFDDIPVLRVSCGGWHTVVVAK 292
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLVACGHSHT 357
G YA+G + G+LGLG DT R P LV V ACG SHT
Sbjct: 293 SGDCYAFGRGEYGRLGLG-------------DTKSRTRPHLVKALKGKTVIQAACGGSHT 339
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
L DG + G +G+ P+ +D VR+ +AGG HS L
Sbjct: 340 LFVTSDGTAYVAGRPDHGRLGLADMKALGVPTRLDLGPIPVRQFSAGGAHSVAL 393
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 173/386 (44%), Gaps = 76/386 (19%)
Query: 11 ARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLD---I 67
+R + + A+Y WG+ GQ G G + + P+++ A L+ I
Sbjct: 58 SRHTMALTSSGAVYSWGWGSMGQLGH-GDLKIINEPQKI--------AFFEQERLEVDYI 108
Query: 68 ACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKH---PEKVKQLQ---SEFVKSISC 121
+CG H+AAV DGTL+ WG + +GQLG E H P K + E + +SC
Sbjct: 109 SCGGCHSAAVTKDGTLYVWGESHWGQLGLPKEYEAAHESLPVKCPMPEGEAGETIVKVSC 168
Query: 122 GAHCTAAIAEPRENDGTISTSRLWVWGQN--------------------QGSNFPRLFWG 161
G TAA+ S R++VWG+ G++ P L
Sbjct: 169 GGTHTAALT---------SFGRVYVWGRGDSGQLGIGSVWMKDPENESLMGASRPHLL-K 218
Query: 162 AFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFL 221
AF ++ QV+CG+ H A++E G + WG +YG LG G + + + I ++
Sbjct: 219 AFNGEKVV-QVACGAFHSAAVTEQGHVYVWGKEDYGMLGVGQSSD-----QQIPKRLEYF 272
Query: 222 DEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD 281
D+ P L +VSCG +H+ V+++G+ Y +G G G+LG +S + P V AL
Sbjct: 273 DDIPVL----RVSCGGWHTVVVAKSGDCYAFGRGEYGRLGLGDTKSRTR---PHLVKALK 325
Query: 282 GIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIP-- 339
G + ACGG H+ +TS G Y G G+LGL +D +P
Sbjct: 326 GKTVIQAACGGSHTLFVTSDGTAYVAGRPDHGRLGL-------------ADMKALGVPTR 372
Query: 340 ILVVPNGVQLVACGHSHTLVYMRDGR 365
+ + P V+ + G +H++ M R
Sbjct: 373 LDLGPIPVRQFSAGGAHSVALMHSSR 398
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 123/254 (48%), Gaps = 40/254 (15%)
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKG--YAKFLDEAPELEKITQVSCGEYHS 240
SEC ++ A+G N+ GQLG G + + + + P+ E I VSCG H+
Sbjct: 4 SEC-VVTAFGCNDDGQLGTGAKRRPTLAIDDVSASNFPQQIGNLPD-EDIVAVSCGSRHT 61
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDG--IFIKDVACGGVHSC 296
A++ +G VY+WG GS+GQLGH GD +++ P+++ + + + ++CGG HS
Sbjct: 62 MALTSSGAVYSWGWGSMGQLGH-----GDLKIINEPQKIAFFEQERLEVDYISCGGCHSA 116
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNG-----VQLV 350
A+T G LY WG S GQLGL P E + ++P+ +P G + V
Sbjct: 117 AVTKDGTLYVWGESHWGQLGL----------PKEYEAAHESLPVKCPMPEGEAGETIVKV 166
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQAA----------NEKSTYAWYPSPVDWCVGE-VR 399
+CG +HT GR++ WG GQ NE A P + GE V
Sbjct: 167 SCGGTHTAALTSFGRVYVWGRGDSGQLGIGSVWMKDPENESLMGASRPHLLKAFNGEKVV 226
Query: 400 KLAAGGGHSAVLAD 413
++A G HSA + +
Sbjct: 227 QVACGAFHSAAVTE 240
>gi|196004949|ref|XP_002112341.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
gi|190584382|gb|EDV24451.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
Length = 794
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/342 (32%), Positives = 168/342 (49%), Gaps = 50/342 (14%)
Query: 63 RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG 122
+ DIACG EHT V +G LFT+G NE+GQLG G+ + R P VK L+ E + ++ G
Sbjct: 36 KVTDIACGDEHTVVVTENGRLFTFGNNEWGQLGIGSNKTRNKPTTVKALKPEKITHVAAG 95
Query: 123 AHCTAAIAEPRENDGTISTSRLWVWGQ-NQGS---------NFPRLFWGAFTPNTIICQV 172
T A+ + +++L+ +GQ ++G+ N P + I +
Sbjct: 96 RFHTLAVTD---------SNKLYSFGQGSEGALGHGDETDLNMPTSIESLEDKDVNI--I 144
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
+CG H A+++ G L WG N GQL GL+ + Y LD + +
Sbjct: 145 ACGGYHSAAITKNGELYIWGSNSEGQL-------GLKNDTI--SYPTMLDLG---KSVIS 192
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
V+CG YH+A V+ +G++YT+G G+LG +++ K P+ V + G +K VACGG
Sbjct: 193 VACGYYHTAVVTADGKLYTFGETEGGKLGLGDIEA-HKVTKPKVVKGISGKVVK-VACGG 250
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV---VPNGVQL 349
H+ ALT+ G +Y +G Q GQLGLG S NIP LV ++
Sbjct: 251 NHTVALTASGQVYTFGSGQNGQLGLG------------SKIMDSNIPKLVEALSKRKIKH 298
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
+ACG SHT V G + +G +G+ +++ PV
Sbjct: 299 IACGESHTAVVSDKGELFTFGDGRHGKLGQGDESFSNLFKPV 340
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 140/277 (50%), Gaps = 35/277 (12%)
Query: 141 TSRLWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
T ++ +G+++ G N FW + + ++CG H V ++E G L +G NE+GQL
Sbjct: 11 TGAVFTFGKSRFGDNRTNKFW---IRSDKVTDIACGDEHTVVVTENGRLFTFGNNEWGQL 67
Query: 200 GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ 259
G G + + P +K A + EKIT V+ G +H+ AV+++ ++Y++G GS G
Sbjct: 68 GIG-SNKTRNKPTTVK--------ALKPEKITHVAAGRFHTLAVTDSNKLYSFGQGSEGA 118
Query: 260 LGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
LGH GD+ L P + +L+ + +ACGG HS A+T G LY WG + GQLGL
Sbjct: 119 LGH-----GDETDLNMPTSIESLEDKDVNIIACGGYHSAAITKNGELYIWGSNSEGQLGL 173
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ- 376
T S+ +L + V VACG+ HT V DG+++ +G G+
Sbjct: 174 KNDTISYPT-------------MLDLGKSVISVACGYYHTAVVTADGKLYTFGETEGGKL 220
Query: 377 -AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
+ ++ P V G+V K+A GG H+ L
Sbjct: 221 GLGDIEAHKVTKPKVVKGISGKVVKVACGGNHTVALT 257
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 123/254 (48%), Gaps = 36/254 (14%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
IACG H+AA+ +G L+ WG+N GQLG + +P + +S V S++CG + T
Sbjct: 144 IACGGYHSAAITKNGELYIWGSNSEGQLG-LKNDTISYPTMLDLGKS--VISVACGYYHT 200
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNF------------PRLFWGAFTPNTIICQVSC 174
A + DG +L+ +G+ +G P++ G + + +V+C
Sbjct: 201 AVVTA----DG-----KLYTFGETEGGKLGLGDIEAHKVTKPKVVKGI---SGKVVKVAC 248
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G H VAL+ G + +G + GQLG G P++++ +K KI ++
Sbjct: 249 GGNHTVALTASGQVYTFGSGQNGQLGLGSKIMDSNIPKLVEALSK--------RKIKHIA 300
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVH 294
CGE H+A VS+ GE++T+G G G+LG +S P +V L + +ACGG H
Sbjct: 301 CGESHTAVVSDKGELFTFGDGRHGKLGQGD-ESFSNLFKPVKVQRLKEFIVLHIACGGCH 359
Query: 295 SCALTSKGALYAWG 308
+ +K A G
Sbjct: 360 TIVACNKIDKLANG 373
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 103/229 (44%), Gaps = 27/229 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I +Y+WG N GQ G K + P L + +ACG+ HTA
Sbjct: 154 ITKNGELYIWGSNSEGQLGLKND--TISYPTMLD---------LGKSVISVACGYYHTAV 202
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRK--HPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
V +DG L+T+G E G+LG G E K P+ VK + + VK ++CG + T A+ +
Sbjct: 203 VTADGKLYTFGETEGGKLGLGDIEAHKVTKPKVVKGISGKVVK-VACGGNHTVALTASGQ 261
Query: 135 --NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
G+ +L + + SN P+L I ++CG H +S+ G L +G
Sbjct: 262 VYTFGSGQNGQLGLGSKIMDSNIPKLVEAL--SKRKIKHIACGESHTAVVSDKGELFTFG 319
Query: 193 YNEYGQLGRGI-TCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
+G+LG+G + L P ++ +F+ + ++CG H+
Sbjct: 320 DGRHGKLGQGDESFSNLFKPVKVQRLKEFI--------VLHIACGGCHT 360
>gi|225438373|ref|XP_002274569.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
vinifera]
gi|296082603|emb|CBI21608.3| unnamed protein product [Vitis vinifera]
Length = 445
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/326 (33%), Positives = 165/326 (50%), Gaps = 44/326 (13%)
Query: 63 RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG 122
R L I+ G H+ A+ S + +WG E GQLG G E R P + L V S++CG
Sbjct: 17 RVLLISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDGHEVVSVTCG 76
Query: 123 AHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQ 171
A T A +E + + W WG +F RL G FTP I I Q
Sbjct: 77 ADHTTAYSE------SFTQVYSWGWG-----DFGRLGHGNSSDLFTPQPIKALHGLRIKQ 125
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
++CG H +A++ G +Q+WG N+ GQLG G T + L P+ I+ + +
Sbjct: 126 IACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLV-PQKIQAFQGV--------SVK 176
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
V+ G H+AAV+E+GE+Y WG G G LG L + L+P +V ++G+ + VACG
Sbjct: 177 MVAAGAEHTAAVTEDGELYGWGWGRYGNLG---LGDRNDRLVPEKVSTVEGVKMVKVACG 233
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVA 351
H+ +++S G LY +G S+ GQLG G L P++ + N+ + ++
Sbjct: 234 WRHTISVSSSGGLYTYGWSKYGQLGHGDFED--HLTPHKLEALQENL--------ISEIS 283
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQA 377
G HT+ DG+++GWG+N +GQ
Sbjct: 284 GGWRHTMALTSDGKLYGWGWNKFGQV 309
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 154/334 (46%), Gaps = 58/334 (17%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
+ +Y WG+ G+ G G L P+ + L G R IACG H AV D
Sbjct: 88 TQVYSWGWGDFGRLGH-GNSSDLFTPQPIKA-LHGL------RIKQIACGDSHCLAVTMD 139
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G + +WG N+ GQLG GT E P+K++ Q VK ++ GA TAA+ E E G
Sbjct: 140 GEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYG--- 196
Query: 141 TSRLWVWGQ----NQGSNFPRLFWGAFTP--NTIICQVSCGSVHVVALSECGLLQAWGYN 194
W WG+ G RL + + +V+CG H +++S G L +G++
Sbjct: 197 ----WGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGWS 252
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+YGQLG G + L ++ EA + I+++S G H+ A++ +G++Y WG
Sbjct: 253 KYGQLGHGDFEDHLTPHKL---------EALQENLISEISGGWRHTMALTSDGKLYGWGW 303
Query: 255 GSVGQLG------HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
GQ+G HCS P +V + ++CG H+ A+T + +++WG
Sbjct: 304 NKFGQVGVGDNVDHCS---------PVQVKFPHEQKVVHISCGWRHTLAVTERQNVFSWG 354
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
GQLG G ++ RNIP ++
Sbjct: 355 RGTNGQLGHG-------------ESIDRNIPKMI 375
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 90/195 (46%), Gaps = 19/195 (9%)
Query: 227 LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIF 284
+ ++ +S G HS A+ V +WG G GQLGH GD E L P + ALDG
Sbjct: 15 VRRVLLISAGASHSVALLSGNVVCSWGRGEDGQLGH-----GDAEDRLSPTYLSALDGHE 69
Query: 285 IKDVACGGVHSCALT-SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
+ V CG H+ A + S +Y+WG G+LG G + F+ P ++ R
Sbjct: 70 VVSVTCGADHTTAYSESFTQVYSWGWGDFGRLGHGNSSDLFTPQPIKALHGLR------- 122
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLA 402
++ +ACG SH L DG + WG N GQ + + P + G V+ +A
Sbjct: 123 ---IKQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVA 179
Query: 403 AGGGHSAVLADACSL 417
AG H+A + + L
Sbjct: 180 AGAEHTAAVTEDGEL 194
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 22/145 (15%)
Query: 3 INEIIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLR-IPKQLPPELFGCPAGAN 61
I+EI G R + + +Y WG+N GQ G + + P E
Sbjct: 279 ISEISG-GWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPHE--------- 328
Query: 62 SRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC 121
+ + I+CG HT AV +F+WG GQLG G R P+ ++ L ++ S
Sbjct: 329 QKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESIDRNIPKMIEVLSADG----SG 384
Query: 122 GAHCTAAIAEPRENDGTISTSRLWV 146
G + +P ST R+WV
Sbjct: 385 GQQIETSKVDP-------STGRIWV 402
>gi|444919546|ref|ZP_21239558.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444708349|gb|ELW49424.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 494
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 121/369 (32%), Positives = 170/369 (46%), Gaps = 58/369 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + + + WG N SGQ G +G P Q+ L G A +A G H+ A
Sbjct: 163 VRSDGSAWAWGSNASGQLG-EGTTSNRPEPVQVQ-GLSGVVA--------VAAGSAHSLA 212
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V SDGT++ WGAN GQLGDGT R P +V+ L V +++ G H + A+ ND
Sbjct: 213 VRSDGTVWAWGANASGQLGDGTTTDRLVPVQVQGLSG--VVAVAAGHHHSLAV----RND 266
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECGLLQAW 191
GT+ W WG+N + + P + + V+ G H +A+ G + A
Sbjct: 267 GTV-----WGWGRNDSNQLGKGSMRLLVPAQVQGLSAVVAVAAGDTHSLAVGSDGTVWAV 321
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G N GQLG G T L P L + V+ +YHS AV +G V+
Sbjct: 322 GSNNNGQLGDGTTT-------------YRLVPVPVLSGVVSVAANDYHSLAVRSDGTVWA 368
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG S GQLG + + L+P +V L + V GG HS A+ S G+ + WG +
Sbjct: 369 WGYNSTGQLGDGTTTT---RLVPVQVSGLSEVV--SVVAGGYHSLAVRSDGSAWDWGSNA 423
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWG 370
GQLG + T + +P+ V +GV VA G SH+L DG + WG
Sbjct: 424 YGQLG-------------DGSTTYLPVPVRVQQLSGVGAVASGSSHSLALRSDGTVWTWG 470
Query: 371 YNSYGQAAN 379
YNS+GQ N
Sbjct: 471 YNSFGQLGN 479
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 132/425 (31%), Positives = 197/425 (46%), Gaps = 66/425 (15%)
Query: 3 INEIIGETARPVDNIPAKS--AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA 60
++E++ A ++ +S ++ WG N SGQ G + I + P ++ G
Sbjct: 47 LSEVVAVDAGSSHSLAVRSDGTVWAWGSNASGQLGD-----ETTISRSTPVQVLGL---- 97
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
S L +A G H A+ DGT++ WG+N GQ GDGT R P + + L V +++
Sbjct: 98 -SGVLFVAAGSSHVLALRYDGTVWAWGSNSSGQRGDGTTNNRALPVQAQGLSG--VMAVA 154
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQNQG--------SNFPRLFWGAFTPNTIICQV 172
G + + A+ +DG+ W WG N SN P + + V
Sbjct: 155 AGDNHSLAV----RSDGSA-----WAWGSNASGQLGEGTTSNRPEPV--QVQGLSGVVAV 203
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
+ GS H +A+ G + AWG N GQLG G T + L P ++G L +
Sbjct: 204 AAGSAHSLAVRSDGTVWAWGANASGQLGDGTTTDRLV-PVQVQG----------LSGVVA 252
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
V+ G +HS AV +G V+ WG QLG S+ + L+P +V L + VA G
Sbjct: 253 VAAGHHHSLAVRNDGTVWGWGRNDSNQLGKGSM----RLLVPAQVQGLSAVVA--VAAGD 306
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVAC 352
HS A+ S G ++A G + GQLG G T ++ L+P +P+L +GV VA
Sbjct: 307 THSLAVGSDGTVWAVGSNNNGQLGDG--TTTYRLVP---------VPVL---SGVVSVAA 352
Query: 353 GHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVL 411
H+L DG + WGYNS GQ + +T P V + EV + AGG HS AV
Sbjct: 353 NDYHSLAVRSDGTVWAWGYNSTGQLGDGTTTTRLVPVQVS-GLSEVVSVVAGGYHSLAVR 411
Query: 412 ADACS 416
+D +
Sbjct: 412 SDGSA 416
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 113/349 (32%), Positives = 157/349 (44%), Gaps = 47/349 (13%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+A G H+ A+ SDGT++ WGAN GQLGDGT P V+ V ++ G+ +
Sbjct: 1 MAAGSSHSLALRSDGTVWAWGANSSGQLGDGTTTYSPVPVPVQVQGLSEVVAVDAGSSHS 60
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNF-PRLFWGAFTPNTI-----ICQVSCGSVHVV 180
A+ +DGT+ W WG N TP + + V+ GS HV+
Sbjct: 61 LAV----RSDGTV-----WAWGSNASGQLGDETTISRSTPVQVLGLSGVLFVAAGSSHVL 111
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
AL G + AWG N GQ G G T +A L + V+ G+ HS
Sbjct: 112 ALRYDGTVWAWGSNSSGQRGDGTTNN-----------RALPVQAQGLSGVMAVAAGDNHS 160
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
AV +G + WG + GQLG + + + P +V L G+ VA G HS A+ S
Sbjct: 161 LAVRSDGSAWAWGSNASGQLGEGTTSNRPE---PVQVQGLSGVVA--VAAGSAHSLAVRS 215
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLV 359
G ++AWG + +GQLG G T R +P+ V +GV VA GH H+L
Sbjct: 216 DGTVWAWGANASGQLGDGTTTD-------------RLVPVQVQGLSGVVAVAAGHHHSLA 262
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
DG + GWG N Q + S P+ V + V +AAG HS
Sbjct: 263 VRNDGTVWGWGRNDSNQLG-KGSMRLLVPAQVQ-GLSAVVAVAAGDTHS 309
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 12/97 (12%)
Query: 3 INEIIGETARPVDNIPAKS--AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA 60
++E++ A ++ +S + + WG N GQ G G L +P ++ +L G A
Sbjct: 394 LSEVVSVVAGGYHSLAVRSDGSAWDWGSNAYGQLG-DGSTTYLPVPVRVQ-QLSGVGA-- 449
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDG 97
+A G H+ A+ SDGT++TWG N FGQLG+G
Sbjct: 450 ------VASGSSHSLALRSDGTVWTWGYNSFGQLGNG 480
>gi|444910459|ref|ZP_21230644.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444719396|gb|ELW60193.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 693
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 123/353 (34%), Positives = 170/353 (48%), Gaps = 50/353 (14%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+A G+ H+ A+ +DGT++ WG+N GQLGDGT R P +V L V ++S G H
Sbjct: 1 MAAGYSHSLALHTDGTVWAWGSNSSGQLGDGTTTPRGSPVQVPGLTD--VVALSAGNHHC 58
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVV 180
A+ DGT+ W WG N G+ PRL T + +S GS + +
Sbjct: 59 LAL----RTDGTV-----WAWGSNSSGQLGDGTTTPRLSSVQVPGLTDVVALSAGSSYTL 109
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
AL G + AWGYN YGQLG G T PR+ + P L + +S G YHS
Sbjct: 110 ALRTDGTVWAWGYNFYGQLGDGTTT-----PRLAP------VQVPGLTDVVALSSGIYHS 158
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
A+ +G V+ WG + GQLG + + L P +V L + ++ GG HS A+ +
Sbjct: 159 LALRTDGTVWAWGDNASGQLGDGTAT---RRLSPVQVPGLTDVVA--LSAGGYHSLAVRT 213
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLVACGHSHTL 358
G ++AWG + +GQLG G T S P+ V + N V L A S+TL
Sbjct: 214 DGTVWAWGSNFSGQLGDGTATPRLS-------------PVQVSGLTNVVALSAD-DSYTL 259
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
DG + WGYNSYGQ + +T P V + V L+AG HS L
Sbjct: 260 ALRTDGTVWAWGYNSYGQLGDGTTTPRLSPVQVP-GLTNVVALSAGYSHSLAL 311
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 126/397 (31%), Positives = 176/397 (44%), Gaps = 60/397 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WGYN++GQ G IP Q P + P + ++ G+ H+ A+ +DGT
Sbjct: 317 VWAWGYNYNGQLGNG-------IPTQRSPSI---PVFGLIDVVALSAGYSHSLALRTDGT 366
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG N GQLGDGT R P +V L V ++S G + A+ DGT+
Sbjct: 367 VWAWGYNSLGQLGDGTTIPRPSPVQVPDLTD--VVALSAGDSHSLAL----RTDGTVR-- 418
Query: 143 RLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
WG N G+ RL T + +S G H +AL G + AWG N
Sbjct: 419 ---AWGVNYSGQLGDGTTTHRLSPVQVPDLTDVVALSAGGNHTLALRTNGTVWAWGSNSD 475
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG G T L +++ L + +S G YHS AV +G V+ WG S
Sbjct: 476 GQLGDGTTTPRLSPVQMLG-----------LTNVVALSAGYYHSLAVHTDGTVWAWGSNS 524
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
GQLG + L P +V L + ++ G HS AL + G ++AWG + + QLG
Sbjct: 525 DGQLGDGTTT---HRLTPVQVPGLTDVVA--LSAGDSHSLALRTDGTVWAWGSNSSSQLG 579
Query: 317 LGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVA--CGHSHTLVYMRDGRIHGWGYNSY 374
G T R P+ V P +VA G +H+L DG + WG N Y
Sbjct: 580 DGTTTP-------------RGSPVQV-PGLTDVVALSAGGAHSLALRTDGTVWAWGSNYY 625
Query: 375 GQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
GQ + +T +P V G L AG GHS L
Sbjct: 626 GQLGDGTTTPRLFPVLVSNLTGT-SNLYAGAGHSLAL 661
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 123/395 (31%), Positives = 182/395 (46%), Gaps = 56/395 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WGYN GQ G G P Q+P + + ++ G H+ A+ +DGT
Sbjct: 117 VWAWGYNFYGQLG-DGTTTPRLAPVQVP---------GLTDVVALSSGIYHSLALRTDGT 166
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG N GQLGDGT R P +V L V ++S G + + A+ DGT+
Sbjct: 167 VWAWGDNASGQLGDGTATRRLSPVQVPGLTD--VVALSAGGYHSLAV----RTDGTV--- 217
Query: 143 RLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
W WG N G+ PRL + T + +S + +AL G + AWGYN Y
Sbjct: 218 --WAWGSNFSGQLGDGTATPRLSPVQVSGLTNVVALSADDSYTLALRTDGTVWAWGYNSY 275
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG G T PR+ + P L + +S G HS A+ +G V+ WG
Sbjct: 276 GQLGDGTTT-----PRLSP------VQVPGLTNVVALSAGYSHSLALRTDGTVWAWGYNY 324
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
GQLG+ + + +P V L I + ++ G HS AL + G ++AWG + GQLG
Sbjct: 325 NGQLGN-GIPTQRSPSIP--VFGL--IDVVALSAGYSHSLALRTDGTVWAWGYNSLGQLG 379
Query: 317 LGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
G + IP S ++ +V ++ G SH+L DG + WG N GQ
Sbjct: 380 DG------TTIPRPSPVQVPDLTDVVA------LSAGDSHSLALRTDGTVRAWGVNYSGQ 427
Query: 377 AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
+ +T+ P V + +V L+AGG H+ L
Sbjct: 428 LGDGTTTHRLSPVQVP-DLTDVVALSAGGNHTLAL 461
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 124/395 (31%), Positives = 174/395 (44%), Gaps = 56/395 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N SGQ G G P Q+P + + ++ G+ H A+ +DGT
Sbjct: 17 VWAWGSNSSGQLG-DGTTTPRGSPVQVP---------GLTDVVALSAGNHHCLALRTDGT 66
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG+N GQLGDGT R +V L V ++S G+ T A+ DGT+
Sbjct: 67 VWAWGSNSSGQLGDGTTTPRLSSVQVPGLTD--VVALSAGSSYTLAL----RTDGTV--- 117
Query: 143 RLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
W WG N G+ PRL T + +S G H +AL G + AWG N
Sbjct: 118 --WAWGYNFYGQLGDGTTTPRLAPVQVPGLTDVVALSSGIYHSLALRTDGTVWAWGDNAS 175
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG G L +V P L + +S G YHS AV +G V+ WG
Sbjct: 176 GQLGDGTATRRLSPVQV-----------PGLTDVVALSAGGYHSLAVRTDGTVWAWGSNF 224
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
GQLG + L P +V L + ++ ++ AL + G ++AWG + GQLG
Sbjct: 225 SGQLGDGTAT---PRLSPVQVSGLTNVVA--LSADDSYTLALRTDGTVWAWGYNSYGQLG 279
Query: 317 LGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
G T S + +P L V ++ G+SH+L DG + WGYN GQ
Sbjct: 280 DGTTTPRLSPV---------QVPGL---TNVVALSAGYSHSLALRTDGTVWAWGYNYNGQ 327
Query: 377 AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
N T PV + +V L+AG HS L
Sbjct: 328 LGNGIPTQRSPSIPVFGLI-DVVALSAGYSHSLAL 361
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 120/381 (31%), Positives = 165/381 (43%), Gaps = 67/381 (17%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLP---PELFGCPAGANSRWLDIACGHEHTAAVAS 79
++ WGYN GQ G IP+ P P+L A ++ G H+ A+ +
Sbjct: 367 VWAWGYNSLGQLGDG-----TTIPRPSPVQVPDLTDVVA--------LSAGDSHSLALRT 413
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
DGT+ WG N GQLGDGT R P +V L V ++S G + T A+ +GT+
Sbjct: 414 DGTVRAWGVNYSGQLGDGTTTHRLSPVQVPDLTD--VVALSAGGNHTLAL----RTNGTV 467
Query: 140 STSRLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
W WG N G+ PRL T + +S G H +A+ G + AWG
Sbjct: 468 -----WAWGSNSDGQLGDGTTTPRLSPVQMLGLTNVVALSAGYYHSLAVHTDGTVWAWGS 522
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
N GQLG G T L +V P L + +S G+ HS A+ +G V+ WG
Sbjct: 523 NSDGQLGDGTTTHRLTPVQV-----------PGLTDVVALSAGDSHSLALRTDGTVWAWG 571
Query: 254 LGSVGQLGHCSLQSGDKELLPR-RVVALDGIF-IKDVACGGVHSCALTSKGALYAWGGSQ 311
S QLG D PR V + G+ + ++ GG HS AL + G ++AWG +
Sbjct: 572 SNSSSQLG-------DGTTTPRGSPVQVPGLTDVVALSAGGAHSLALRTDGTVWAWGSNY 624
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWG 370
GQLG G T R P+LV G + G H+L DG WG
Sbjct: 625 YGQLGDGTTTP-------------RLFPVLVSNLTGTSNLYAGAGHSLALRTDGTGRAWG 671
Query: 371 YNSYGQAANEKSTYAWYPSPV 391
N GQ + S + +P V
Sbjct: 672 NNYGGQLGDGTSAFFLHPVQV 692
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 119/395 (30%), Positives = 176/395 (44%), Gaps = 56/395 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WGYN GQ G +L P Q+P + + ++ G+ H+ A+ +DGT
Sbjct: 267 VWAWGYNSYGQLGDGTTTPRLS-PVQVP---------GLTNVVALSAGYSHSLALRTDGT 316
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG N GQLG+G R V L V ++S G + A+ DGT+
Sbjct: 317 VWAWGYNYNGQLGNGIPTQRSPSIPVFGLID--VVALSAGYSHSLAL----RTDGTV--- 367
Query: 143 RLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
W WG N G+ PR T + +S G H +AL G ++AWG N
Sbjct: 368 --WAWGYNSLGQLGDGTTIPRPSPVQVPDLTDVVALSAGDSHSLALRTDGTVRAWGVNYS 425
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG G T L +V P+L + +S G H+ A+ NG V+ WG S
Sbjct: 426 GQLGDGTTTHRLSPVQV-----------PDLTDVVALSAGGNHTLALRTNGTVWAWGSNS 474
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
GQLG + L P +++ L + ++ G HS A+ + G ++AWG + GQLG
Sbjct: 475 DGQLGDGTTT---PRLSPVQMLGLTNVVA--LSAGYYHSLAVHTDGTVWAWGSNSDGQLG 529
Query: 317 LGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
G T + + +P L V ++ G SH+L DG + WG NS Q
Sbjct: 530 DGTTTHRLTPV---------QVPGL---TDVVALSAGDSHSLALRTDGTVWAWGSNSSSQ 577
Query: 377 AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
+ +T P V + +V L+AGG HS L
Sbjct: 578 LGDGTTTPRGSPVQVP-GLTDVVALSAGGAHSLAL 611
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 152/335 (45%), Gaps = 47/335 (14%)
Query: 2 DINEIIGETARPVDNIPAKS--AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
D+ +++ +A ++ ++ + WG N+SGQ G +L P Q+P +L A
Sbjct: 394 DLTDVVALSAGDSHSLALRTDGTVRAWGVNYSGQLGDGTTTHRLS-PVQVP-DLTDVVA- 450
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
++ G HT A+ ++GT++ WG+N GQLGDGT R P V+ L V ++
Sbjct: 451 -------LSAGGNHTLALRTNGTVWAWGSNSDGQLGDGTTTPRLSP--VQMLGLTNVVAL 501
Query: 120 SCGAHCTAAIAEPRENDGTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVS 173
S G + + A+ DGT+ W WG N G+ RL T + +S
Sbjct: 502 SAGYYHSLAV----HTDGTV-----WAWGSNSDGQLGDGTTTHRLTPVQVPGLTDVVALS 552
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
G H +AL G + AWG N QLG G T +G V + P L + +
Sbjct: 553 AGDSHSLALRTDGTVWAWGSNSSSQLGDGTTTP--RGSPV---------QVPGLTDVVAL 601
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
S G HS A+ +G V+ WG GQLG + L P V L G ++ G
Sbjct: 602 SAGGAHSLALRTDGTVWAWGSNYYGQLGDGTTT---PRLFPVLVSNLTGT--SNLYAGAG 656
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIP 328
HS AL + G AWG + GQLG G T +F L P
Sbjct: 657 HSLALRTDGTGRAWGNNYGGQLGDG--TSAFFLHP 689
>gi|108761023|ref|YP_629150.1| RCC1 repeat-containing protein [Myxococcus xanthus DK 1622]
gi|108464903|gb|ABF90088.1| RCC1 repeat domain protein [Myxococcus xanthus DK 1622]
Length = 1466
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 122/360 (33%), Positives = 167/360 (46%), Gaps = 55/360 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG SGQ G G ER + +P + AG S +A G H+ A DG+
Sbjct: 380 LWAWGGGLSGQLGHGGSERHV-----VPAPVMRL-AGVTS----MATGSFHSLAALGDGS 429
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG N +GQLGDG+ R +V+ L V+S++ AH + A+ DGT+
Sbjct: 430 VWAWGRNTYGQLGDGSTAERHAAVRVEGLGG--VRSVASAAHHSLAVGM----DGTV--- 480
Query: 143 RLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
W WG+N G+ R A T + V+ G HV+AL G + AWGYN
Sbjct: 481 --WAWGRNAAGQLGDGTTLDRARPVAVPGLTSVTAVAAGGSHVLALRSDGSVWAWGYNAL 538
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG G T + L RV L + V+ G Y S A+ +G V+TWG G
Sbjct: 539 GQLGDGTTVDRLTPVRV-----------SGLGAVVAVAAGSYFSMALQSDGTVWTWGEGF 587
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
GQLG G + L P RV L I VA G H+ A+ G ++AWG + GQLG
Sbjct: 588 EGQLGDG---GGVQRLSPVRVEGL--ANITRVAAGSAHALAVRGDGTVWAWGDNGEGQLG 642
Query: 317 LGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
G F + +P L G+ V+ G SH++ DG + WGYN YGQ
Sbjct: 643 DGSWADRFRPV---------QVPGL---QGITAVSGGRSHSMALQGDGTVRAWGYNGYGQ 690
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 117/375 (31%), Positives = 169/375 (45%), Gaps = 60/375 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A + WG N SGQ G G P +P G P + +A G +H+ A
Sbjct: 774 VRADGTVMAWGENGSGQLG-DGTSTHRTGPVSVP----GVPCVRS-----VASGIQHSLA 823
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+A DGT++ WGAN GQLGDGT R P V+ L+ V +++ G + A+ D
Sbjct: 824 LACDGTVWAWGANARGQLGDGTTTPRVTPGLVEGLRG--VVALAAGGDASVAL----RAD 877
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI---------ICQVSCGSVHVVALSECGL 187
G++ W WG N G T + V+ G H +A+ E G
Sbjct: 878 GSV-----WSWGGNASGQLGD---GTLTDRALPAHVEHLSNAVAVAVGETHALAVGEDGA 929
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
L AWG N GQLG G T L P +KG LE++ V+ G S AV ++G
Sbjct: 930 LWAWGANGSGQLGDGGTAPSLT-PVRVKG----------LERVASVAAGRAFSVAVRDDG 978
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
+ WG GQLG + + +P +V +L G I+ ++ G H AL++ G ++ W
Sbjct: 979 TAWAWGTNPSGQLGDGTNHA---RSVPNQVTSLKG--IRAMSAGAHHVVALSADGTVWTW 1033
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G + GQLG G + + + R +P L GV+ VA G T+ + DG
Sbjct: 1034 GDNTLGQLGDGSSS--------PTGMWPRQVPEL---RGVEAVAAGEQFTVAVLLDGTAR 1082
Query: 368 GWGYNSYGQAANEKS 382
WG N YGQ + K+
Sbjct: 1083 AWGSNEYGQLGDGKT 1097
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 130/417 (31%), Positives = 184/417 (44%), Gaps = 66/417 (15%)
Query: 11 ARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACG 70
A V + A ++ WG N GQ G P+Q+P EL G A +A G
Sbjct: 1018 AHHVVALSADGTVWTWGDNTLGQLGDGSSSPTGMWPRQVP-ELRGVEA--------VAAG 1068
Query: 71 HEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK----QLQSEFVKSISCGAHCT 126
+ T AV DGT WG+NE+GQLGDG + P VK +++ + G H
Sbjct: 1069 EQFTVAVLLDGTARAWGSNEYGQLGDGKTGPQLTPMAVKIEGPKIRPPVRTVRAWGQHAV 1128
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-----ICQVSCGSV 177
+ +DGT+ T WG N F +L G T P T+ + VS G+
Sbjct: 1129 VQM-----SDGTVQT-----WGDN---TFGQLGDGTTTRRAVPLTVYGLASVVAVSSGAW 1175
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H +AL G + AWG N +GQLG G + PR + L + + G
Sbjct: 1176 HSLALLSDGTVWAWGANGFGQLGDGTST-----PRTRP------VQVAGLGDVVAIGSGG 1224
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
YH+ AV +G V+TWG + GQLG + +S LP RV L+G+ VA G +S A
Sbjct: 1225 YHALAVCSDGSVWTWGYNAFGQLGDGTAES---RSLPTRVEGLEGVVA--VAGGDHYSLA 1279
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT 357
L S G L AWG + +GQLG G T +S + + ++ G +HT
Sbjct: 1280 LHSDGTLSAWGNNASGQLGDGTGTTRYSRVAVKGVDGVVDV------------RAGATHT 1327
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKS--TYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
+ DG + WG N++GQ + S P PV + V + AG H+ +A
Sbjct: 1328 VALRGDGTVWTWGDNAFGQLGDGASGTRMRLVPRPVP-NLSSVSAVGAGARHTFAVA 1383
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 119/363 (32%), Positives = 170/363 (46%), Gaps = 57/363 (15%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
+ + G H+ A+ +DG+++TWG N GQLGDGT R P +V L S V +++ G
Sbjct: 112 VSVVSGDAHSLALGADGSVWTWGGNSSGQLGDGTTTDRATPMRVAGLDS--VVAVAAGDF 169
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTI-----ICQVS 173
+ A+ E DGT+ W WG N +G P L TP + + ++
Sbjct: 170 HSLALRE----DGTV-----WAWGTNFHGQLGRGHTQPGL-----TPEQVPGLNGVVALA 215
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
G +A+ E G ++AWG N GQLG G + + L +V EL IT+V
Sbjct: 216 AGFDFTLAVLEDGTVRAWGSNGSGQLGDGTSTQRLSPVKV-----------SELSGITEV 264
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
G YH+ A+ ++G V+TWG + GQLG + + +P +V L+ +K VA
Sbjct: 265 RAGTYHALALGKDGGVWTWGSNASGQLGDGTW---NDRAVPMQVPGLE--RVKAVASMDS 319
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG 353
S AL GA++AWG + +GQLG G T + P +P L N V V G
Sbjct: 320 DSLALLDTGAVFAWGANGSGQLGDGDTTDRATPGP---------VPGL---NAVASVVGG 367
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLA 412
H LV +DG + WG GQ + S P+PV G V +A G HS A L
Sbjct: 368 AQHALVLRKDGTLWAWGGGLSGQLGHGGSERHVVPAPVMRLAG-VTSMATGSFHSLAALG 426
Query: 413 DAC 415
D
Sbjct: 427 DGS 429
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 126/399 (31%), Positives = 181/399 (45%), Gaps = 62/399 (15%)
Query: 23 IYVWGYNHSGQTGRK---GRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
++ WG N +GQ G R R + +P L A +A G H A+ S
Sbjct: 480 VWAWGRNAAGQLGDGTTLDRARPVAVPG-----LTSVTA--------VAAGGSHVLALRS 526
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
DG+++ WG N GQLGDGT R P +V L + V +++ G++ + A+ ++DGT+
Sbjct: 527 DGSVWAWGYNALGQLGDGTTVDRLTPVRVSGLGA--VVAVAAGSYFSMAL----QSDGTV 580
Query: 140 STSRLWVWGQ------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
W WG+ G RL I +V+ GS H +A+ G + AWG
Sbjct: 581 -----WTWGEGFEGQLGDGGGVQRLSPVRVEGLANITRVAAGSAHALAVRGDGTVWAWGD 635
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
N GQLG G + + +V P L+ IT VS G HS A+ +G V WG
Sbjct: 636 NGEGQLGDGSWADRFRPVQV-----------PGLQGITAVSGGRSHSMALQGDGTVRAWG 684
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
GQLG +L S + P + L G I+ + +H AL + G L WG ++ G
Sbjct: 685 YNGYGQLGDGTLTS---RVRPALIPGLTG--IQALHPSHLHVLALHADGTLRGWGYNRFG 739
Query: 314 QLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNS 373
QLGLG +S +P + R V ++ G +HTL+ DG + WG N
Sbjct: 740 QLGLGAA--GWSAVPVQVRGIGR----------VDRLSVGRAHTLMVRADGTVMAWGENG 787
Query: 374 YGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
GQ + ST+ P V V VR +A+G HS LA
Sbjct: 788 SGQLGDGTSTHRTGPVSVP-GVPCVRSVASGIQHSLALA 825
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 124/401 (30%), Positives = 173/401 (43%), Gaps = 66/401 (16%)
Query: 22 AIYVWGYNHSGQTGRKG---RERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
+++ WG N GQ G R +R+ E G G S +A H+ AV
Sbjct: 429 SVWAWGRNTYGQLGDGSTAERHAAVRV------EGLG---GVRS----VASAAHHSLAVG 475
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DGT++ WG N GQLGDGT R P V L S V +++ G A+ +DG+
Sbjct: 476 MDGTVWAWGRNAAGQLGDGTTLDRARPVAVPGLTS--VTAVAAGGSHVLAL----RSDGS 529
Query: 139 ISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
+ W WG N G+ RL + + V+ GS +AL G + WG
Sbjct: 530 V-----WAWGYNALGQLGDGTTVDRLTPVRVSGLGAVVAVAAGSYFSMALQSDGTVWTWG 584
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
GQLG G + L P ++G L IT+V+ G H+ AV +G V+ W
Sbjct: 585 EGFEGQLGDGGGVQRLS-PVRVEG----------LANITRVAAGSAHALAVRGDGTVWAW 633
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G GQLG S P +V L G I V+ G HS AL G + AWG +
Sbjct: 634 GDNGEGQLGDGSWA---DRFRPVQVPGLQG--ITAVSGGRSHSMALQGDGTVRAWGYNGY 688
Query: 313 GQLGLGPQTRSF--SLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWG 370
GQLG G T +LIP + G+Q + H H L DG + GWG
Sbjct: 689 GQLGDGTLTSRVRPALIPGLT--------------GIQALHPSHLHVLALHADGTLRGWG 734
Query: 371 YNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
YN +GQ + ++ P V +G V +L+ G H+ ++
Sbjct: 735 YNRFGQLGLGAAGWSAVPVQVR-GIGRVDRLSVGRAHTLMV 774
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 118/398 (29%), Positives = 178/398 (44%), Gaps = 56/398 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +++ WG N SGQ G G P ++ AG +S + +A G H+ A
Sbjct: 124 LGADGSVWTWGGNSSGQLG-DGTTTDRATPMRV--------AGLDSV-VAVAAGDFHSLA 173
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DGT++ WG N GQLG G + PE+V L V +++ G T A+ E D
Sbjct: 174 LREDGTVWAWGTNFHGQLGRGHTQPGLTPEQVPGLNG--VVALAAGFDFTLAVLE----D 227
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
GT+ WG N G++ RL + + I +V G+ H +AL + G +
Sbjct: 228 GTVR-----AWGSNGSGQLGDGTSTQRLSPVKVSELSGITEVRAGTYHALALGKDGGVWT 282
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG N GQLG G + R + + P LE++ V+ + S A+ + G V+
Sbjct: 283 WGSNASGQLGDGTWND-----RAVP------MQVPGLERVKAVASMDSDSLALLDTGAVF 331
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
WG GQLG P V L+ + V G H+ L G L+AWGG
Sbjct: 332 AWGANGSGQLGDGDTT---DRATPGPVPGLN--AVASVVGGAQHALVLRKDGTLWAWGGG 386
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWG 370
+GQLG G R ++P P++ + GV +A G H+L + DG + WG
Sbjct: 387 LSGQLGHGGSER--HVVP---------APVMRLA-GVTSMATGSFHSLAALGDGSVWAWG 434
Query: 371 YNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
N+YGQ + + V+ +G VR +A+ HS
Sbjct: 435 RNTYGQLGDGSTAERHAAVRVE-GLGGVRSVASAAHHS 471
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/303 (33%), Positives = 139/303 (45%), Gaps = 43/303 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G P+ P ++ G + I G H AV SDG+
Sbjct: 1186 VWAWGANGFGQLGDG-----TSTPRTRPVQVAGL-----GDVVAIGSGGYHALAVCSDGS 1235
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++TWG N FGQLGDGT E R P +V+ L E V +++ G H + A+ +DGT+S
Sbjct: 1236 VWTWGYNAFGQLGDGTAESRSLPTRVEGL--EGVVAVAGGDHYSLAL----HSDGTLS-- 1287
Query: 143 RLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
WG N G+ R A + V G+ H VAL G + WG N +
Sbjct: 1288 ---AWGNNASGQLGDGTGTTRYSRVAVKGVDGVVDVRAGATHTVALRGDGTVWTWGDNAF 1344
Query: 197 GQLGRGITCEGLQ-GPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
GQLG G + ++ PR + P L ++ V G H+ AV+ G V+TWG
Sbjct: 1345 GQLGDGASGTRMRLVPRPV----------PNLSSVSAVGAGARHTFAVALKGTVWTWGRN 1394
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
S GQLG L P RV L + + V+ G S A+ G + +WG S G L
Sbjct: 1395 SHGQLG---LGDNTNRTEPLRVRELSDVTV--VSGGADFSLAMKRDGTVLSWGSSLYGSL 1449
Query: 316 GLG 318
GLG
Sbjct: 1450 GLG 1452
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 122/403 (30%), Positives = 165/403 (40%), Gaps = 63/403 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N SGQ G G +P Q+P R +A + A+ G
Sbjct: 280 VWTWGSNASGQLG-DGTWNDRAVPMQVP---------GLERVKAVASMDSDSLALLDTGA 329
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F WGAN GQLGDG R P V L + V S+ GA + DGT
Sbjct: 330 VFAWGANGSGQLGDGDTTDRATPGPVPGLNA--VASVVGGAQHALVL----RKDGT---- 379
Query: 143 RLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
LW WG G + + + ++ GS H +A G + AWG N Y
Sbjct: 380 -LWAWGGGLSGQLGHGGSERHVVPAPVMRLAGVTSMATGSFHSLAALGDGSVWAWGRNTY 438
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG G T E RV L + V+ +HS AV +G V+ WG +
Sbjct: 439 GQLGDGSTAERHAAVRV-----------EGLGGVRSVASAAHHSLAVGMDGTVWAWGRNA 487
Query: 257 VGQLGHCSLQSGDKELLPR-RVVALDGIF-IKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG D L R R VA+ G+ + VA GG H AL S G+++AWG + GQ
Sbjct: 488 AGQLG-------DGTTLDRARPVAVPGLTSVTAVAAGGSHVLALRSDGSVWAWGYNALGQ 540
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNG-VQLVACGHSHTLVYMRDGRIHGWGYNS 373
LG + T R P+ V G V VA G ++ DG + WG
Sbjct: 541 LG-------------DGTTVDRLTPVRVSGLGAVVAVAAGSYFSMALQSDGTVWTWGEGF 587
Query: 374 YGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLADAC 415
GQ + P V+ + + ++AAG H+ AV D
Sbjct: 588 EGQLGDGGGVQRLSPVRVE-GLANITRVAAGSAHALAVRGDGT 629
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 111/365 (30%), Positives = 160/365 (43%), Gaps = 65/365 (17%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+ WG N GQ G R + +P ++G + + ++ G H+ A+ SDGT
Sbjct: 1136 VQTWGDNTFGQLGDGTTTR-----RAVPLTVYGL-----ASVVAVSSGAWHSLALLSDGT 1185
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WGAN FGQLGDGT R P +V L + V S G H A +DG++
Sbjct: 1186 VWAWGANGFGQLGDGTSTPRTRPVQVAGL-GDVVAIGSGGYHALAVC-----SDGSV--- 1236
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTI---------ICQVSCGSVHVVALSECGLLQAWGY 193
W WG N F +L G ++ + V+ G + +AL G L AWG
Sbjct: 1237 --WTWGYNA---FGQLGDGTAESRSLPTRVEGLEGVVAVAGGDHYSLALHSDGTLSAWGN 1291
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS-CGEYHSAAVSENGEVYTW 252
N GQLG G G ++ A + G H+ A+ +G V+TW
Sbjct: 1292 NASGQLGDG------------TGTTRYSRVAVKGVDGVVDVRAGATHTVALRGDGTVWTW 1339
Query: 253 GLGSVGQLGHCSLQSGDK-ELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
G + GQLG + SG + L+PR V L + V G H+ A+ KG ++ WG +
Sbjct: 1340 GDNAFGQLGDGA--SGTRMRLVPRPVPNLS--SVSAVGAGARHTFAVALKGTVWTWGRNS 1395
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWG 370
GQLGLG D R P+ V + V +V+ G +L RDG + WG
Sbjct: 1396 HGQLGLG-------------DNTNRTEPLRVRELSDVTVVSGGADFSLAMKRDGTVLSWG 1442
Query: 371 YNSYG 375
+ YG
Sbjct: 1443 SSLYG 1447
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 108/232 (46%), Gaps = 29/232 (12%)
Query: 170 CQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK 229
+++ G+ H + LS G + AWG N GQLG T LQG ++ A LE
Sbjct: 61 MRIAAGTQHSLYLSPGGDVWAWGGNGSGQLGGAETS--LQGLAPVRLAA--------LEN 110
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
I V G+ HS A+ +G V+TWG S GQLG + P RV LD + VA
Sbjct: 111 IVSVVSGDAHSLALGADGSVWTWGGNSSGQLGDGTTT---DRATPMRVAGLDSVVA--VA 165
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
G HS AL G ++AWG + GQLG G T+ L P + +P L NGV
Sbjct: 166 AGDFHSLALREDGTVWAWGTNFHGQLGRG-HTQP-GLTPEQ-------VPGL---NGVVA 213
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG--EVR 399
+A G TL + DG + WG N GQ + ST P V G EVR
Sbjct: 214 LAAGFDFTLAVLEDGTVRAWGSNGSGQLGDGTSTQRLSPVKVSELSGITEVR 265
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 83/191 (43%), Gaps = 31/191 (16%)
Query: 23 IYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+ WG N SGQ G G R R+ + + AGA HT A+ DG
Sbjct: 1286 LSAWGNNASGQLGDGTGTTRYSRVAVKGVDGVVDVRAGAT-----------HTVALRGDG 1334
Query: 82 TLFTWGANEFGQLGDGTEEGRKH--PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
T++TWG N FGQLGDG R P V L S V ++ GA T A+A GT+
Sbjct: 1335 TVWTWGDNAFGQLGDGASGTRMRLVPRPVPNLSS--VSAVGAGARHTFAVAL----KGTV 1388
Query: 140 STSRLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
W WG+N G N R + + VS G+ +A+ G + +WG
Sbjct: 1389 -----WTWGRNSHGQLGLGDNTNRTEPLRVRELSDVTVVSGGADFSLAMKRDGTVLSWGS 1443
Query: 194 NEYGQLGRGIT 204
+ YG LG G T
Sbjct: 1444 SLYGSLGLGAT 1454
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 98/241 (40%), Gaps = 49/241 (20%)
Query: 219 KFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW--GLGSVGQLGHCSLQSGDKELLPRR 276
+ + AP + +++ G HS +S G+V+ W SLQ L P R
Sbjct: 53 RVVVTAPPM----RIAAGTQHSLYLSPGGDVWAWGGNGSGQLGGAETSLQG----LAPVR 104
Query: 277 VVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFR 336
+ AL+ I V G HS AL + G+++ WGG+ +GQLG G T R
Sbjct: 105 LAALENIV--SVVSGDAHSLALGADGSVWTWGGNSSGQLGDGTTTD-------------R 149
Query: 337 NIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV---- 391
P+ V + V VA G H+L DG + WG N +GQ + P V
Sbjct: 150 ATPMRVAGLDSVVAVAAGDFHSLALREDGTVWAWGTNFHGQLGRGHTQPGLTPEQVPGLN 209
Query: 392 ---------DWCV-----GEVRKLAAGGGHSAVLADACSLKELCEFRLAESVTLSNASEI 437
D+ + G VR + G S L D S + L +++E LS +E+
Sbjct: 210 GVVALAAGFDFTLAVLEDGTVRAWGSNG--SGQLGDGTSTQRLSPVKVSE---LSGITEV 264
Query: 438 E 438
Sbjct: 265 R 265
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 16/105 (15%)
Query: 7 IGETARPVDNIPAKSAIYVWGYNHSGQTG---RKGRERQLRIPKQLPPELFGCPAGANSR 63
+G AR + K ++ WG N GQ G R LR+ ++L
Sbjct: 1372 VGAGARHTFAVALKGTVWTWGRNSHGQLGLGDNTNRTEPLRV-RELSDVTV--------- 1421
Query: 64 WLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
++ G + + A+ DGT+ +WG++ +G LG G R P +V
Sbjct: 1422 ---VSGGADFSLAMKRDGTVLSWGSSLYGSLGLGATGHRSSPGQV 1463
>gi|444915391|ref|ZP_21235524.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444713468|gb|ELW54366.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 743
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 121/371 (32%), Positives = 176/371 (47%), Gaps = 59/371 (15%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+++ WG N SGQ G G R P Q+ L G A +A G +H+ A+ SDG
Sbjct: 416 SVWAWGSNDSGQLG-DGTTRNSTSPVQVQ-GLSGVVA--------VAAGFDHSLALRSDG 465
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+++ WG+N +GQLG+GT R P +V V +++ G++ + A+ +DGT+
Sbjct: 466 SVWAWGSNAYGQLGEGTTTNRLVPVQVL----SGVVAVAAGSNHSLAV----RSDGTV-- 515
Query: 142 SRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNE 195
W WG N G+ RL + + V+ GS H +A+ G + AWG N
Sbjct: 516 ---WTWGSNLYGQLGDGTTSNRLVPVQVQGLSGVAAVAAGSFHSLAVHSDGSVWAWGSNS 572
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
G+LG G T R++ G P L V+ G +HS V +G V+TWG
Sbjct: 573 SGELGDGTTSN-----RLVPG------RVPGLSGGVAVAAGGFHSLVVRSDGTVWTWGSN 621
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
S G+LG + S +P +V L G+ D G HS A+ S G ++ WG + GQL
Sbjct: 622 SFGELGDGTTTS---RSVPVQVQGLSGVVAVD--AGNSHSLAVRSDGTVWTWGYNSYGQL 676
Query: 316 GLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
G G TR R++P+ V +GV +A G H LV DG + WGYNS+
Sbjct: 677 GDGTTTR-------------RSVPVQVPGLSGVVAMATGALHPLVVRSDGTVWAWGYNSF 723
Query: 375 GQAANEKSTYA 385
GQ N +A
Sbjct: 724 GQLGNGSPLFA 734
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 126/405 (31%), Positives = 186/405 (45%), Gaps = 66/405 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + ++ WG N SG+ G + P ++ G G + +A G H+ A
Sbjct: 361 VGSDGTVWAWGSNFSGERGEGTTNN-----RASPVQVQGLGGG-----VAVAAGFNHSLA 410
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
SDG+++ WG+N+ GQLGDGT P +V+ L V +++ G + A+ +D
Sbjct: 411 ARSDGSVWAWGSNDSGQLGDGTTRNSTSPVQVQGLSG--VVAVAAGFDHSLAL----RSD 464
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTI---ICQVSCGSVHVVALSECGL 187
G++ W WG N +G+ RL P + + V+ GS H +A+ G
Sbjct: 465 GSV-----WAWGSNAYGQLGEGTTTNRLV-----PVQVLSGVVAVAAGSNHSLAVRSDGT 514
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ WG N YGQLG G T L P ++G L + V+ G +HS AV +G
Sbjct: 515 VWTWGSNLYGQLGDGTTSNRLV-PVQVQG----------LSGVAAVAAGSFHSLAVHSDG 563
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
V+ WG S G+LG + L+P RV L G VA GG HS + S G ++ W
Sbjct: 564 SVWAWGSNSSGELGDGTTS---NRLVPGRVPGLSGGVA--VAAGGFHSLVVRSDGTVWTW 618
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRI 366
G + G+LG G T R++P+ V +GV V G+SH+L DG +
Sbjct: 619 GSNSFGELGDGTTTS-------------RSVPVQVQGLSGVVAVDAGNSHSLAVRSDGTV 665
Query: 367 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
WGYNSYGQ + +T P V G V +A G H V+
Sbjct: 666 WTWGYNSYGQLGDGTTTRRSVPVQVPGLSGVV-AMATGALHPLVV 709
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 129/405 (31%), Positives = 188/405 (46%), Gaps = 67/405 (16%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+++ WG+N SGQ G + +P ++ G G + + G H+ AV SDG
Sbjct: 316 SVWAWGHNSSGQLGDDSSTS-----RSVPVQVRGLSGG-----MAVTAGSSHSLAVGSDG 365
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGTIS 140
T++ WG+N G+ G+GT R P +V+ L +++ G H AA +DG++
Sbjct: 366 TVWAWGSNFSGERGEGTTNNRASPVQVQGLGGGV--AVAAGFNHSLAA-----RSDGSV- 417
Query: 141 TSRLWVWGQNQ----GSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECGLLQAW 191
W WG N G R + +P + + V+ G H +AL G + AW
Sbjct: 418 ----WAWGSNDSGQLGDGTTR---NSTSPVQVQGLSGVVAVAAGFDHSLALRSDGSVWAW 470
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G N YGQLG G T L +V+ G + V+ G HS AV +G V+T
Sbjct: 471 GSNAYGQLGEGTTTNRLVPVQVLSG-------------VVAVAAGSNHSLAVRSDGTVWT 517
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG GQLG + L+P +V L G+ VA G HS A+ S G+++AWG +
Sbjct: 518 WGSNLYGQLGDGTTS---NRLVPVQVQGLSGV--AAVAAGSFHSLAVHSDGSVWAWGSNS 572
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGY 371
+G+LG G T S L+P +P L +G VA G H+LV DG + WG
Sbjct: 573 SGELGDG--TTSNRLVPGR-------VPGL---SGGVAVAAGGFHSLVVRSDGTVWTWGS 620
Query: 372 NSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLADAC 415
NS+G+ + +T P V G V + AG HS AV +D
Sbjct: 621 NSFGELGDGTTTSRSVPVQVQGLSGVV-AVDAGNSHSLAVRSDGT 664
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 127/401 (31%), Positives = 184/401 (45%), Gaps = 64/401 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +++ WG N SGQ G + +L +P Q+P S + +A G H+ A
Sbjct: 211 VLSDGSVWAWGANSSGQLGDGTKINRL-VPVQVP---------GLSGVVAVAAGAAHSLA 260
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V SDGT++TWGAN FGQLGDGT+ R P +V+ L + G++ + A+ +D
Sbjct: 261 VRSDGTVWTWGANSFGQLGDGTKSDRLVPVRVQGLSGVVASDV--GSYHSLAL----RSD 314
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQ---------VSCGSVHVVALSECGL 187
G++ W WG N + T ++ Q V+ GS H +A+ G
Sbjct: 315 GSV-----WAWGHNSSGQLGD---DSSTSRSVPVQVRGLSGGMAVTAGSSHSLAVGSDGT 366
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWG N G+ G G T P ++G L V+ G HS A +G
Sbjct: 367 VWAWGSNFSGERGEG-TTNNRASPVQVQG----------LGGGVAVAAGFNHSLAARSDG 415
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
V+ WG GQLG + + P +V L G+ VA G HS AL S G+++AW
Sbjct: 416 SVWAWGSNDSGQLGDGTTR---NSTSPVQVQGLSGVVA--VAAGFDHSLALRSDGSVWAW 470
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G + GQLG E T R +P+ V+ +GV VA G +H+L DG +
Sbjct: 471 GSNAYGQLG-------------EGTTTNRLVPVQVL-SGVVAVAAGSNHSLAVRSDGTVW 516
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
WG N YGQ + ++ P V G V +AAG HS
Sbjct: 517 TWGSNLYGQLGDGTTSNRLVPVQVQGLSG-VAAVAAGSFHS 556
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 128/393 (32%), Positives = 178/393 (45%), Gaps = 58/393 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ G N GQ G G P Q+P L G A +A G H+ AV DGT
Sbjct: 67 VWATGSNDLGQLG-DGTTTNHSAPVQVP-GLSGVVA--------VAAGSSHSLAVRHDGT 116
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG+N GQLGDGT R P +V+ L V S++ G+ + A+ +DGT+
Sbjct: 117 VWAWGSNSDGQLGDGTTTMRLTPVRVQGLSG--VVSVAAGSSYSLAV----RSDGTV--- 167
Query: 143 RLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
W WG N G+ RL + + V+ GS H +A+ G + AWG N
Sbjct: 168 --WAWGSNFSGQLGDGTTSNRLVPVQVPGLSGVVSVAAGSSHSLAVLSDGSVWAWGANSS 225
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG G R++ + P L + V+ G HS AV +G V+TWG S
Sbjct: 226 GQLGDGTKIN-----RLVP------VQVPGLSGVVAVAAGAAHSLAVRSDGTVWTWGANS 274
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
GQLG + L+P RV L G+ DV G HS AL S G+++AWG + +GQLG
Sbjct: 275 FGQLGDGTKS---DRLVPVRVQGLSGVVASDV--GSYHSLALRSDGSVWAWGHNSSGQLG 329
Query: 317 LGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
+ + R++P+ V +G V G SH+L DG + WG N G
Sbjct: 330 -------------DDSSTSRSVPVQVRGLSGGMAVTAGSSHSLAVGSDGTVWAWGSNFSG 376
Query: 376 QAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
+ + P V G V +AAG HS
Sbjct: 377 ERGEGTTNNRASPVQVQGLGGGV-AVAAGFNHS 408
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 130/407 (31%), Positives = 180/407 (44%), Gaps = 61/407 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + ++ WG N SGQ G +L +P Q+P L G + +A G H+ A
Sbjct: 161 VRSDGTVWAWGSNFSGQLGDGTTSNRL-VPVQVP-GLSGV--------VSVAAGSSHSLA 210
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V SDG+++ WGAN GQLGDGT+ R P +V L S V + AH A +D
Sbjct: 211 VLSDGSVWAWGANSSGQLGDGTKINRLVPVQVPGL-SGVVAVAAGAAHSLAV-----RSD 264
Query: 137 GTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
GT+ W WG N G+ RL + + GS H +AL G + A
Sbjct: 265 GTV-----WTWGANSFGQLGDGTKSDRLVPVRVQGLSGVVASDVGSYHSLALRSDGSVWA 319
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG+N GQLG + P ++G + + V+ G HS AV +G V+
Sbjct: 320 WGHNSSGQLGDDSSTS-RSVPVQVRGLSGGM----------AVTAGSSHSLAVGSDGTVW 368
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
WG G+ G + + P +V L G VA G HS A S G+++AWG +
Sbjct: 369 AWGSNFSGERGEGTT---NNRASPVQVQGLGGGVA--VAAGFNHSLAARSDGSVWAWGSN 423
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGW 369
+GQLG G S S P+ V +GV VA G H+L DG + W
Sbjct: 424 DSGQLGDGTTRNSTS-------------PVQVQGLSGVVAVAAGFDHSLALRSDGSVWAW 470
Query: 370 GYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLADAC 415
G N+YGQ +T P V + V +AAG HS AV +D
Sbjct: 471 GSNAYGQLGEGTTTNRLVPVQV---LSGVVAVAAGSNHSLAVRSDGT 514
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 117/386 (30%), Positives = 171/386 (44%), Gaps = 59/386 (15%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+A G ++ A+ DGT++ G+N+ GQLGDGT P +V L V +++ G+ +
Sbjct: 51 LAAGSSYSLALRPDGTVWATGSNDLGQLGDGTTTNHSAPVQVPGLSG--VVAVAAGSSHS 108
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-----ICQVSCG 175
A+ +DGT+ W WG N G+ RL TP + + V+ G
Sbjct: 109 LAV----RHDGTV-----WAWGSNSDGQLGDGTTTMRL-----TPVRVQGLSGVVSVAAG 154
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
S + +A+ G + AWG N GQLG G T R++ + P L + V+
Sbjct: 155 SSYSLAVRSDGTVWAWGSNFSGQLGDGTTSN-----RLVP------VQVPGLSGVVSVAA 203
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
G HS AV +G V+ WG S GQLG + L+P +V L G+ HS
Sbjct: 204 GSSHSLAVLSDGSVWAWGANSSGQLGDGTKI---NRLVPVQVPGLSGVVAVAAGA--AHS 258
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS 355
A+ S G ++ WG + GQLG G T+S L+P +GV G
Sbjct: 259 LAVRSDGTVWTWGANSFGQLGDG--TKSDRLVPVRVQGL----------SGVVASDVGSY 306
Query: 356 HTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLADA 414
H+L DG + WG+NS GQ ++ ST P V G + + AG HS AV +D
Sbjct: 307 HSLALRSDGSVWAWGHNSSGQLGDDSSTSRSVPVQVRGLSGGM-AVTAGSSHSLAVGSDG 365
Query: 415 CSLKELCEF--RLAESVTLSNASEIE 438
F E T + AS ++
Sbjct: 366 TVWAWGSNFSGERGEGTTNNRASPVQ 391
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 114/257 (44%), Gaps = 44/257 (17%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + ++ WG N GQ G +L +P Q+ L G A +A G H+ A
Sbjct: 509 VRSDGTVWTWGSNLYGQLGDGTTSNRL-VPVQVQ-GLSGVAA--------VAAGSFHSLA 558
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V SDG+++ WG+N G+LGDGT R P +V L S V + G H +D
Sbjct: 559 VHSDGSVWAWGSNSSGELGDGTTSNRLVPGRVPGL-SGGVAVAAGGFHSLVV-----RSD 612
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQ---------VSCGSVHVVALSECGL 187
GT+ W WG N +F L G T ++ Q V G+ H +A+ G
Sbjct: 613 GTV-----WTWGSN---SFGELGDGTTTSRSVPVQVQGLSGVVAVDAGNSHSLAVRSDGT 664
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ WGYN YGQLG G T R + + P L + ++ G H V +G
Sbjct: 665 VWTWGYNSYGQLGDGTTTR-----RSVP------VQVPGLSGVVAMATGALHPLVVRSDG 713
Query: 248 EVYTWGLGSVGQLGHCS 264
V+ WG S GQLG+ S
Sbjct: 714 TVWAWGYNSFGQLGNGS 730
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 89/197 (45%), Gaps = 24/197 (12%)
Query: 221 LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL 280
L +AP ++ + G +S A+ +G V+ G +GQLG + P +V L
Sbjct: 42 LRDAPSRARL---AAGSSYSLALRPDGTVWATGSNDLGQLGDGTTT---NHSAPVQVPGL 95
Query: 281 DGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI 340
G+ VA G HS A+ G ++AWG + GQLG G T R P+
Sbjct: 96 SGVVA--VAAGSSHSLAVRHDGTVWAWGSNSDGQLGDGTTT-------------MRLTPV 140
Query: 341 LVVP-NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVR 399
V +GV VA G S++L DG + WG N GQ + ++ P V G V
Sbjct: 141 RVQGLSGVVSVAAGSSYSLAVRSDGTVWAWGSNFSGQLGDGTTSNRLVPVQVPGLSGVV- 199
Query: 400 KLAAGGGHS-AVLADAC 415
+AAG HS AVL+D
Sbjct: 200 SVAAGSSHSLAVLSDGS 216
>gi|383319251|ref|YP_005380092.1| chromosome condensation regulator RCC1 [Methanocella conradii
HZ254]
gi|379320621|gb|AFC99573.1| regulator of chromosome condensation RCC1 [Methanocella conradii
HZ254]
Length = 447
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 119/342 (34%), Positives = 159/342 (46%), Gaps = 50/342 (14%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
IA G H A+ DGT++ WG+N +G+LGDGT E P +V L VK+IS G +
Sbjct: 75 IAAGSGHVLALKGDGTVWAWGSNSYGELGDGTNENSIEPVQVAGLTG--VKAISAGKGFS 132
Query: 127 AAIAEPRENDGTISTSRLWVWGQN---QGSNFPRLFWGAFTPNTI-----ICQVSCGSVH 178
A+ + DG++ W WG N Q P F G+ TP + + +SCG H
Sbjct: 133 LAL----KGDGSV-----WAWGSNTYGQLGKNPLSFMGSLTPIQVEGLEGVVSISCGGSH 183
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
AL E G+L AWG N +G LG G ++F P+++ + GE
Sbjct: 184 CFALQENGVLWAWGENSHGILGDGTN------------ESQFKPVKPKIKDVKAFDAGEL 231
Query: 239 -HSAAVSENGEVYTWGLGSVGQLGH--CSLQSGDKELLPRRVVALDGIFI------KDVA 289
H+ AV E+G V+ WG GQLG SL + L R + + K VA
Sbjct: 232 SHALAVKEDGSVWAWGFNYKGQLGTGGVSLSDQGRISLGREADNYNPDIVRGVSDAKAVA 291
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
GG HS AL S G+++AWG + GQLGLG S P T + I GV
Sbjct: 292 AGGSHSVALASDGSVWAWGSNSDGQLGLGHAGGSDVTSP----TRVQGI------EGVTA 341
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
+A G HTL DG + WG NS GQ N + A P P+
Sbjct: 342 IAAGMYHTLALKGDGSVWAWGSNSDGQLGNASFSAASSPVPI 383
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 114/263 (43%), Gaps = 42/263 (15%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ Q++ GS HV+AL G + AWG N YG+LG G ++ P + G L
Sbjct: 72 VRQIAAGSGHVLALKGDGTVWAWGSNSYGELGDGTNENSIE-PVQVAG----------LT 120
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
+ +S G+ S A+ +G V+ WG + GQLG L S L P +V L+G+ +
Sbjct: 121 GVKAISAGKGFSLALKGDGSVWAWGSNTYGQLGKNPL-SFMGSLTPIQVEGLEGVV--SI 177
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLI-PNESDTYFRNIPILVVPNGV 347
+CGG H AL G L+AWG + G LG G F + P D + L
Sbjct: 178 SCGGSHCFALQENGVLWAWGENSHGILGDGTNESQFKPVKPKIKDVKAFDAGEL------ 231
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYA-------------WYPSPVDWC 394
SH L DG + WG+N GQ + + + P V
Sbjct: 232 -------SHALAVKEDGSVWAWGFNYKGQLGTGGVSLSDQGRISLGREADNYNPDIVR-G 283
Query: 395 VGEVRKLAAGGGHSAVLADACSL 417
V + + +AAGG HS LA S+
Sbjct: 284 VSDAKAVAAGGSHSVALASDGSV 306
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 116/268 (43%), Gaps = 53/268 (19%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+++ WG N GQ G+ L L P G + I+CG H A+ +G
Sbjct: 140 SVWAWGSNTYGQLGK----NPLSFMGSLTPIQVEGLEGV----VSISCGGSHCFALQENG 191
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG--AHCTAAIAEPRENDGTI 139
L+ WG N G LGDGT E + P K K + VK+ G +H A + DG++
Sbjct: 192 VLWAWGENSHGILGDGTNESQFKPVKPKI---KDVKAFDAGELSHALAV-----KEDGSV 243
Query: 140 STSRLWVWGQNQG----------SNFPRLFWG----AFTPNTI-----ICQVSCGSVHVV 180
W WG N S+ R+ G + P+ + V+ G H V
Sbjct: 244 -----WAWGFNYKGQLGTGGVSLSDQGRISLGREADNYNPDIVRGVSDAKAVAAGGSHSV 298
Query: 181 ALSECGLLQAWGYNEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
AL+ G + AWG N GQLG G + P ++G +E +T ++ G YH
Sbjct: 299 ALASDGSVWAWGSNSDGQLGLGHAGGSDVTSPTRVQG----------IEGVTAIAAGMYH 348
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQS 267
+ A+ +G V+ WG S GQLG+ S +
Sbjct: 349 TLALKGDGSVWAWGSNSDGQLGNASFSA 376
Score = 38.5 bits (88), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 339 PILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEV 398
P V +GV+ +A G H L DG + WG NSYG+ + + + P V G V
Sbjct: 64 PQRVDISGVRQIAAGSGHVLALKGDGTVWAWGSNSYGELGDGTNENSIEPVQVAGLTG-V 122
Query: 399 RKLAAGGGHSAVL 411
+ ++AG G S L
Sbjct: 123 KAISAGKGFSLAL 135
>gi|325183095|emb|CCA17552.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 545
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 122/404 (30%), Positives = 190/404 (47%), Gaps = 53/404 (13%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG GQ G Q P L A + + + I+CG HT + DG
Sbjct: 2 TVYTWGRGEDGQLGLGD------TSDQYHPIL--VEALQDRQTVQISCGSGHTVVLTDDG 53
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
++TWG + G+LG G + P V+ L+ + V+ ++CG++ TAA+ E
Sbjct: 54 KVYTWGRGDDGRLGHGDNGWKFVPRLVEDLRDKKVRQVTCGSYHTAAVTVSGE------- 106
Query: 142 SRLWVWGQNQGSNFPRLFWGA----FTPNTI-------ICQVSCGSVHVVALSECGLLQA 190
L+ WG G + +L G TP+ + + QV+CGS H V L E +
Sbjct: 107 --LYTWG---GGMYGKLGHGNENGHSTPSLVESIKGLYVRQVACGSRHTVVLLENQDVYT 161
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG E G G G T P + E E+ I Q+S +H+AA+SENG+V+
Sbjct: 162 WGDKENGVSGHGDTSGHQYSPYCVS-------ELVEI-NIKQISACGFHTAALSENGQVF 213
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
T+G G G+LGH S ++ + + + + AL G IK VACGG H+ A+T G ++ WGG
Sbjct: 214 TFGEGKFGRLGHNSERN---QPVAKCIDALIGKRIKQVACGGFHTAAVTESGHVFTWGGG 270
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWG 370
+ GQLG G + +IP ++ L+ N +QL CG SHT+ G + WG
Sbjct: 271 EHGQLGHGDKVN--QIIPTRVES-------LIDKNIIQL-TCGWSHTVALTDKGEVFTWG 320
Query: 371 YNSYGQAANEKSTYAWYPSPVD-WCVGEVRKLAAGGGHSAVLAD 413
+G+ + + P ++ + V +A+ H+ L +
Sbjct: 321 NGDHGKLGHNDTNKVTEPKLIETFNSKRVISVASYNEHTVALVN 364
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG GQ G + Q+ IP ++ + + + + CG HT A+ G
Sbjct: 264 VFTWGGGEHGQLGHGDKVNQI-IPTRVESLI-------DKNIIQLTCGWSHTVALTDKGE 315
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
+FTWG + G+LG P+ ++ S+ V S++ T A+ P N
Sbjct: 316 VFTWGNGDHGKLGHNDTNKVTEPKLIETFNSKRVISVASYNEHTVALVNPDAN 368
>gi|338533363|ref|YP_004666697.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
gi|337259459|gb|AEI65619.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
Length = 1379
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 130/401 (32%), Positives = 180/401 (44%), Gaps = 62/401 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG NH GQ G R+L P Q+ L A +A G H AA DGT
Sbjct: 742 LWAWGDNHWGQLGDGTTTRRL-TPVQVQ-GLMDVTA--------MAAGGYHMAAAGQDGT 791
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG N +GQLG G R P +V+ L S +I+ G T A+ DGT+
Sbjct: 792 LWTWGLNSYGQLGGGPLSYRLLPVQVQGLTSATATAIAAGDSHTVAV----RQDGTV--- 844
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTI------------ICQVSCGSVHVVALSECGLLQA 190
W W GSNF T ++ + ++ G H+ A + G L
Sbjct: 845 --WAW----GSNFSGQLGDGTTAQSLTPVQVQVQGLMDVTAMAAGGYHMAAAGQDGTLWT 898
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG N YGQLG G L P ++G L +T ++ G YH AA ++G ++
Sbjct: 899 WGLNSYGQLGGGPLSYRLL-PVQVQG----------LMDVTAMAAGGYHMAAAGQDGTLW 947
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
TWGL S GQLG L LLP +V L + + +A GG H A G L+ WG +
Sbjct: 948 TWGLNSYGQLGGGPL---SYRLLPVQVQGL--MSVTAMAAGGYHMAAAGQDGTLWTWGLN 1002
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWG 370
GQLG GP ++S + + + GV +A G SHTL +DG + WG
Sbjct: 1003 SYGQLGGGPLSQSLTPVQVQVQGL----------TGVAAIAAGFSHTLAVRQDGTVWSWG 1052
Query: 371 YNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
N+YGQ + + + P V G V ++AG H+ L
Sbjct: 1053 GNAYGQLGDGTTAQSLTPVQVQGLTG-VTAISAGDAHTVAL 1092
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 130/398 (32%), Positives = 188/398 (47%), Gaps = 62/398 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N SGQ G G P Q+ L G A IA G+ +T A DGT
Sbjct: 342 LWAWGNNSSGQLG-DGTTTVRFTPVQVQ-GLTGVTA--------IAAGYLYTVASKQDGT 391
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG NE+GQLGDGT R P +V+ L V +I+ G T A + DGT+
Sbjct: 392 VWAWGDNEWGQLGDGTTTRRLTPVQVQGLTG--VTAIAAGYLYTVA----SKQDGTV--- 442
Query: 143 RLWVWGQNQGSNFPRLFWGAF----TPNTI-----ICQVSCGSVHVVALSECGLLQAWGY 193
W WG N+ S GA TP + I ++ ++ VA+ + G + AWG
Sbjct: 443 --WAWGDNKRSQLGE---GAVSQRHTPGEVQGLEGITAIAASNLLTVAVRQDGTVWAWGD 497
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
N GQLG G T L P ++G L +T V+ +YH AV ++G V+ WG
Sbjct: 498 NARGQLGDGTTTRRLT-PVQVQG----------LAGVTAVAASDYHLVAVRQDGTVWAWG 546
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
+G GQLG + G P +V L G+ +A G H+ AL G ++AWG + G
Sbjct: 547 VGFWGQLGDGT---GMDRSTPVQVQGLTGV--TAIAAGSNHTVALRQDGTVWAWGFNNYG 601
Query: 314 QLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNS 373
QLG G T + L P + +P + G +A G SHT+ ++DG + WGYN
Sbjct: 602 QLGDG--TTAGHLTPVQ-------VPGV---TGAVAIAAGGSHTVALLQDGTVWTWGYNI 649
Query: 374 YGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
+GQ + +T+ P V + +V +A GH+ +
Sbjct: 650 WGQLGDGTTTHRHSPVQVQ-GLADVIAIATNNGHTVAV 686
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 131/409 (32%), Positives = 182/409 (44%), Gaps = 68/409 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N+ GQ G L P Q+P + G A IA G HT A+ DGT
Sbjct: 592 VWAWGFNNYGQLGDGTTAGHL-TPVQVP-GVTGAVA--------IAAGGSHTVALLQDGT 641
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++TWG N +GQLGDGT R P +V+ L ++ + + H A DGT+
Sbjct: 642 VWTWGYNIWGQLGDGTTTHRHSPVQVQGL-ADVIAIATNNGHTVAV-----RQDGTV--- 692
Query: 143 RLWVWGQNQ------GSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECGLLQAW 191
W WG N G+ RL TP + + S VA+ + L AW
Sbjct: 693 --WTWGLNSSGQLGDGTTTQRL-----TPVQVHGLTDATAILTSSSQTVAMRQDRTLWAW 745
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G N +GQLG G T L P ++G L +T ++ G YH AA ++G ++T
Sbjct: 746 GDNHWGQLGDGTTTRRLT-PVQVQG----------LMDVTAMAAGGYHMAAAGQDGTLWT 794
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WGL S GQLG L LLP +V L +A G H+ A+ G ++AWG +
Sbjct: 795 WGLNSYGQLGGGPL---SYRLLPVQVQGLTSATATAIAAGDSHTVAVRQDGTVWAWGSNF 851
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG---VQLVACGHSHTLVYMRDGRIHG 368
+GQLG G +S + P+ V G V +A G H +DG +
Sbjct: 852 SGQLGDGTTAQSLT-------------PVQVQVQGLMDVTAMAAGGYHMAAAGQDGTLWT 898
Query: 369 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSL 417
WG NSYGQ +Y P V + +V +AAGG H A +L
Sbjct: 899 WGLNSYGQLGGGPLSYRLLPVQVQGLM-DVTAMAAGGYHMAAAGQDGTL 946
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 126/398 (31%), Positives = 185/398 (46%), Gaps = 56/398 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G G R+ LP ++ G + + IA G HT AV DGT
Sbjct: 792 LWTWGLNSYGQLG--GGPLSYRL---LPVQVQGLTSATATA---IAAGDSHTVAVRQDGT 843
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG+N GQLGDGT P +V+ V +++ G + AA + DGT
Sbjct: 844 VWAWGSNFSGQLGDGTTAQSLTPVQVQVQGLMDVTAMAAGGYHMAAAGQ----DGT---- 895
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQV---------SCGSVHVVALSECGLLQAWGY 193
LW WG N ++ +L G + + QV + G H+ A + G L WG
Sbjct: 896 -LWTWGLN---SYGQLGGGPLSYRLLPVQVQGLMDVTAMAAGGYHMAAAGQDGTLWTWGL 951
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
N YGQLG G L P ++G L +T ++ G YH AA ++G ++TWG
Sbjct: 952 NSYGQLGGGPLSYRLL-PVQVQG----------LMSVTAMAAGGYHMAAAGQDGTLWTWG 1000
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
L S GQLG L + L P +V + +A G H+ A+ G +++WGG+ G
Sbjct: 1001 LNSYGQLGGGPL---SQSLTPVQVQVQGLTGVAAIAAGFSHTLAVRQDGTVWSWGGNAYG 1057
Query: 314 QLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNS 373
QLG G +S + + + T GV ++ G +HT+ RDG + WG NS
Sbjct: 1058 QLGDGTTAQSLTPVQVQGLT------------GVTAISAGDAHTVALRRDGTVWAWGRNS 1105
Query: 374 YGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
+GQ + +T+ P V G V +AAG H+ L
Sbjct: 1106 WGQLGDGTTTHRATPVQVQGLTG-VIAIAAGSLHTVAL 1142
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 124/382 (32%), Positives = 176/382 (46%), Gaps = 59/382 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G G Q P Q+ L G A I+ G HT A+ DGT
Sbjct: 1048 VWSWGGNAYGQLG-DGTTAQSLTPVQVQ-GLTGVTA--------ISAGDAHTVALRRDGT 1097
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG N +GQLGDGT R P +V+ L V +I+ G+ T A+ DGT+
Sbjct: 1098 VWAWGRNSWGQLGDGTTTHRATPVQVQGLTG--VIAIAAGSLHTVAL----RQDGTV--- 1148
Query: 143 RLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
W WG+N G+ R T + ++ GS+H VAL + G + AWG+N+
Sbjct: 1149 --WAWGRNSWGQLGDGTTTHRATPVQVQGLTGVIAIAAGSLHTVALRQDGTVWAWGFNDL 1206
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG G T L P ++G L +T ++ G +H+AAV ++G +TWG
Sbjct: 1207 GQLGDGTTTRRLT-PAQVQG----------LTGVTTIAAGYFHTAAVRQDGTAWTWGFNL 1255
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
GQLG + P +V L G + +A G H+ + G ++AWG + QLG
Sbjct: 1256 WGQLGDGTF---TDRATPVQVQGLTG--VSALAAGYAHTVVVGEDGTVWAWGNNSGTQLG 1310
Query: 317 LGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
G T R+ P+ V G +A G HT+ DG GWG N+ G
Sbjct: 1311 NGSSTD-------------RSTPVQVEALTGAFSLAAGRFHTVAMSPDGAGWGWGRNNLG 1357
Query: 376 QAANEKSTYAWYPSPVDWCVGE 397
Q + T A P+PV+ V E
Sbjct: 1358 QVGD--GTTADRPTPVNVMVQE 1377
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 125/400 (31%), Positives = 181/400 (45%), Gaps = 62/400 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPE-LFGCPAGANSRWLDIACGHEHTAAVASDG 81
++ WG N SGQ G G Q P Q+ + L A +A G H AA DG
Sbjct: 844 VWAWGSNFSGQLG-DGTTAQSLTPVQVQVQGLMDVTA--------MAAGGYHMAAAGQDG 894
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
TL+TWG N +GQLG G R P +V+ L V +++ G + AA + DGT
Sbjct: 895 TLWTWGLNSYGQLGGGPLSYRLLPVQVQGLMD--VTAMAAGGYHMAAAGQ----DGT--- 945
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPNTIICQV---------SCGSVHVVALSECGLLQAWG 192
LW WG N ++ +L G + + QV + G H+ A + G L WG
Sbjct: 946 --LWTWGLN---SYGQLGGGPLSYRLLPVQVQGLMSVTAMAAGGYHMAAAGQDGTLWTWG 1000
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
N YGQLG G + L +V + L + ++ G H+ AV ++G V++W
Sbjct: 1001 LNSYGQLGGGPLSQSLTPVQV---------QVQGLTGVAAIAAGFSHTLAVRQDGTVWSW 1051
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G + GQLG + + L P +V L G+ ++ G H+ AL G ++AWG +
Sbjct: 1052 GGNAYGQLGDGTTA---QSLTPVQVQGLTGV--TAISAGDAHTVALRRDGTVWAWGRNSW 1106
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWGY 371
GQLG + T R P+ V GV +A G HT+ +DG + WG
Sbjct: 1107 GQLG-------------DGTTTHRATPVQVQGLTGVIAIAAGSLHTVALRQDGTVWAWGR 1153
Query: 372 NSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
NS+GQ + +T+ P V G V +AAG H+ L
Sbjct: 1154 NSWGQLGDGTTTHRATPVQVQGLTG-VIAIAAGSLHTVAL 1192
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 178/388 (45%), Gaps = 58/388 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G R+ P Q+ + G A IA G HT A + DGT
Sbjct: 94 VWAWGNNDDGQLGDGTTTRRFS-PVQV---MTGATA--------IAAGIYHTVAASQDGT 141
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++TWG N GQLGDGT R P +V+ L V +++ G + +AA+ + GT+
Sbjct: 142 VWTWGRNSSGQLGDGTSIQRFSPVQVQGLTG--VTAVAAGRNHSAALGQ----GGTV--- 192
Query: 143 RLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
W WG N G++ RL T + +S VAL + G + AWG N
Sbjct: 193 --WTWGDNLVGQLGDGTSTQRLTPVQVQGLTGVIAISANDSETVALRQDGTVWAWGNNSS 250
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG G T +V+ L +T ++ G + A+ ++G ++ WG S
Sbjct: 251 GQLGDGTTTVRFTPVQVLG-----------LTGVTAIAAGGGFAVALRQDGTLWAWGSNS 299
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
GQLG+ + + P +V L G + +A G+H+ AL G L+AWG + +GQLG
Sbjct: 300 RGQLGNGTTFGSYR---PEQVQGLTG--VTAIAASGIHTVALRQDGTLWAWGNNSSGQLG 354
Query: 317 LGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
G T F+ + + T GV +A G+ +T+ +DG + WG N +GQ
Sbjct: 355 DGTTTVRFTPVQVQGLT------------GVTAIAAGYLYTVASKQDGTVWAWGDNEWGQ 402
Query: 377 AANEKSTYAWYPSPVDWCVGEVRKLAAG 404
+ +T P V G V +AAG
Sbjct: 403 LGDGTTTRRLTPVQVQGLTG-VTAIAAG 429
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 128/438 (29%), Positives = 188/438 (42%), Gaps = 92/438 (21%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N SGQ G G P Q+ L G A IA G A+ DGT
Sbjct: 242 VWAWGNNSSGQLG-DGTTTVRFTPVQVL-GLTGVTA--------IAAGGGFAVALRQDGT 291
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+ WG+N GQLG+GT G PE+V+ L V +I+ T A+ DGT
Sbjct: 292 LWAWGSNSRGQLGNGTTFGSYRPEQVQGLTG--VTAIAASGIHTVAL----RQDGT---- 341
Query: 143 RLWVWGQNQ------GSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECGLLQAW 191
LW WG N G+ R FTP + + ++ G ++ VA + G + AW
Sbjct: 342 -LWAWGNNSSGQLGDGTTTVR-----FTPVQVQGLTGVTAIAAGYLYTVASKQDGTVWAW 395
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G NE+GQLG G T L P ++G L +T ++ G ++ A ++G V+
Sbjct: 396 GDNEWGQLGDGTTTRRLT-PVQVQG----------LTGVTAIAAGYLYTVASKQDGTVWA 444
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG QLG ++ + P V L+GI +A + + A+ G ++AWG +
Sbjct: 445 WGDNKRSQLGEGAV---SQRHTPGEVQGLEGI--TAIAASNLLTVAVRQDGTVWAWGDNA 499
Query: 312 AGQLGLGPQTRSFSLIPNE----------SDTYF-------------------------- 335
GQLG G TR + + + SD +
Sbjct: 500 RGQLGDGTTTRRLTPVQVQGLAGVTAVAASDYHLVAVRQDGTVWAWGVGFWGQLGDGTGM 559
Query: 336 -RNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDW 393
R+ P+ V GV +A G +HT+ +DG + WG+N+YGQ + + P V
Sbjct: 560 DRSTPVQVQGLTGVTAIAAGSNHTVALRQDGTVWAWGFNNYGQLGDGTTAGHLTPVQVPG 619
Query: 394 CVGEVRKLAAGGGHSAVL 411
G V +AAGG H+ L
Sbjct: 620 VTGAV-AIAAGGSHTVAL 636
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 114/372 (30%), Positives = 167/372 (44%), Gaps = 59/372 (15%)
Query: 45 IPKQLPPELFGCPAGANSRWLDIACGH-EHTAAVASDGTLFTWGANEFGQLGDGTEEGRK 103
+ K+ P L G A A +A G+ HT AV DGT++ WG N+ GQLGDGT R
Sbjct: 55 LSKRTAPGLQGANAFAAPAGPVLAAGNGNHTLAVRQDGTVWAWGNNDDGQLGDGTTTRRF 114
Query: 104 HPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQ------GSNFPR 157
P +V +I+ G + T A ++ DGT+ W WG+N G++ R
Sbjct: 115 SPVQVM----TGATAIAAGIYHTVAASQ----DGTV-----WTWGRNSSGQLGDGTSIQR 161
Query: 158 LFWGAFTPNTI-----ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPR 212
F+P + + V+ G H AL + G + WG N GQLG G + + L P
Sbjct: 162 -----FSPVQVQGLTGVTAVAAGRNHSAALGQGGTVWTWGDNLVGQLGDGTSTQRLT-PV 215
Query: 213 VIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKEL 272
++G L + +S + + A+ ++G V+ WG S GQLG +
Sbjct: 216 QVQG----------LTGVIAISANDSETVALRQDGTVWAWGNNSSGQLGDGTT---TVRF 262
Query: 273 LPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESD 332
P +V+ L G + +A GG + AL G L+AWG + GQLG G S+ P +
Sbjct: 263 TPVQVLGLTG--VTAIAAGGGFAVALRQDGTLWAWGSNSRGQLGNGTTFGSYR--PEQVQ 318
Query: 333 TYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVD 392
GV +A HT+ +DG + WG NS GQ + +T + P V
Sbjct: 319 GL----------TGVTAIAASGIHTVALRQDGTLWAWGNNSSGQLGDGTTTVRFTPVQVQ 368
Query: 393 WCVGEVRKLAAG 404
G V +AAG
Sbjct: 369 GLTG-VTAIAAG 379
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 112/241 (46%), Gaps = 33/241 (13%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H +A+ + G + AWG N+ GQLG G T +V+ G T ++ G
Sbjct: 84 HTLAVRQDGTVWAWGNNDDGQLGDGTTTRRFSPVQVMTG-------------ATAIAAGI 130
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGH-CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSC 296
YH+ A S++G V+TWG S GQLG S+Q P +V L G+ VA G HS
Sbjct: 131 YHTVAASQDGTVWTWGRNSSGQLGDGTSIQ----RFSPVQVQGLTGV--TAVAAGRNHSA 184
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
AL G ++ WG + GQLG G T+ + + + T GV ++ S
Sbjct: 185 ALGQGGTVWTWGDNLVGQLGDGTSTQRLTPVQVQGLT------------GVIAISANDSE 232
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACS 416
T+ +DG + WG NS GQ + +T + P V G V +AAGGG + L +
Sbjct: 233 TVALRQDGTVWAWGNNSSGQLGDGTTTVRFTPVQVLGLTG-VTAIAAGGGFAVALRQDGT 291
Query: 417 L 417
L
Sbjct: 292 L 292
>gi|312282233|dbj|BAJ33982.1| unnamed protein product [Thellungiella halophila]
Length = 440
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 109/326 (33%), Positives = 165/326 (50%), Gaps = 44/326 (13%)
Query: 63 RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG 122
R L I+ G H+ A+ S + +WG E GQLG G E R P ++ L + S++CG
Sbjct: 16 RVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDDHQIVSVTCG 75
Query: 123 AHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQ 171
A T A +E R W WG +F RL G FTP I I Q
Sbjct: 76 ADHTVAYSESRME------VYSWGWG-----DFGRLGHGNSSDLFTPLPIKALHGIRIKQ 124
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
++CG H +A++ G +Q+WG N+ GQLG G T + L P+ I+ + +I
Sbjct: 125 IACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV-PQKIQAFEGI--------RIK 175
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
V+ G H+AAV+E+G++Y WG G G LG L + L+P RV + G + VACG
Sbjct: 176 MVAAGAEHTAAVTEDGDLYGWGWGRYGNLG---LGDRNDRLVPERVTSAGGEKMSMVACG 232
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVA 351
H+ +++ GALY +G S+ GQLG G L+P++ + ++ + ++
Sbjct: 233 WRHTISVSYSGALYTYGWSKYGQLGHGDLED--HLVPHKLEALGNSV--------ISQIS 282
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQA 377
G HT+ DG+++GWG+N +GQ
Sbjct: 283 GGWRHTMALTSDGKLYGWGWNKFGQV 308
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 174/383 (45%), Gaps = 62/383 (16%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA-SDGTLF 84
WG GQ G E +L P QL A + + + + CG +HT A + S ++
Sbjct: 39 WGRGEDGQLGHGDAEDRLS-PTQLS-------ALDDHQIVSVTCGADHTVAYSESRMEVY 90
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGTISTSR 143
+WG +FG+LG G P +K L +K I+CG +HC A E G + +
Sbjct: 91 SWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTME-----GEVQS-- 143
Query: 144 LWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAWG 192
WG+NQ +L G + P I I V+ G+ H A++E G L WG
Sbjct: 144 ---WGRNQNG---QLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWG 197
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
+ YG LG G + L RV EK++ V+CG H+ +VS +G +YT+
Sbjct: 198 WGRYGNLGLGDRNDRLVPERVTSAGG---------EKMSMVACGWRHTISVSYSGALYTY 248
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G GQLGH L+ L+P ++ AL I ++ G H+ ALTS G LY WG ++
Sbjct: 249 GWSKYGQLGHGDLE---DHLVPHKLEALGNSVISQISGGWRHTMALTSDGKLYGWGWNKF 305
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQLV--ACGHSHTLVYMRDGRIHGW 369
GQ+G+G S P+ V +P+ ++V +CG HTL + W
Sbjct: 306 GQVGVGNNLDQCS-------------PVQVRIPDDQKVVQVSCGWRHTLAVTERNNVFAW 352
Query: 370 GYNSYGQAANEKSTYAWYPSPVD 392
G + GQ +S +P ++
Sbjct: 353 GRGTNGQLGIGESLDRNFPKIIE 375
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/317 (30%), Positives = 152/317 (47%), Gaps = 36/317 (11%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPE-LFGCPAGANSRWLDIACGHEHTAAV 77
++ +Y WG+ G+ G G L P LP + L G R IACG H AV
Sbjct: 85 SRMEVYSWGWGDFGRLGH-GNSSDLFTP--LPIKALHGI------RIKQIACGDSHCLAV 135
Query: 78 ASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG 137
+G + +WG N+ GQLG G E P+K++ + +K ++ GA TAA+ E DG
Sbjct: 136 TMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE----DG 191
Query: 138 TISTSRLWVWGQ----NQGSNFPRLFWGAFTP--NTIICQVSCGSVHVVALSECGLLQAW 191
+ W WG+ G RL T + V+CG H +++S G L +
Sbjct: 192 DLYG---WGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGALYTY 248
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G+++YGQLG G + L ++ EA I+Q+S G H+ A++ +G++Y
Sbjct: 249 GWSKYGQLGHGDLEDHLVPHKL---------EALGNSVISQISGGWRHTMALTSDGKLYG 299
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG GQ+G + + + P +V D + V+CG H+ A+T + ++AWG
Sbjct: 300 WGWNKFGQVG---VGNNLDQCSPVQVRIPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGT 356
Query: 312 AGQLGLGPQ-TRSFSLI 327
GQLG+G R+F I
Sbjct: 357 NGQLGIGESLDRNFPKI 373
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 116/242 (47%), Gaps = 23/242 (9%)
Query: 165 PNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
P + +S G+ H VAL ++ +WG E GQLG G + L ++ A
Sbjct: 13 PPRRVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRLSPTQL---------SA 63
Query: 225 PELEKITQVSCGEYHSAAVSENG-EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
+ +I V+CG H+ A SE+ EVY+WG G G+LGH + S D P + AL GI
Sbjct: 64 LDDHQIVSVTCGADHTVAYSESRMEVYSWGWGDFGRLGHGN--SSDL-FTPLPIKALHGI 120
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
IK +ACG H A+T +G + +WG +Q GQLGLG S L+P + F I I
Sbjct: 121 RIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDS--LVPQKIQA-FEGIRI--- 174
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 403
++VA G HT DG ++GWG+ YG P V GE + A
Sbjct: 175 ----KMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVA 230
Query: 404 GG 405
G
Sbjct: 231 CG 232
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 92/198 (46%), Gaps = 19/198 (9%)
Query: 224 APELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALD 281
P ++ +S G HS A+ V +WG G GQLGH GD E L P ++ ALD
Sbjct: 11 TPPPRRVLIISAGASHSVALLSGDIVCSWGRGEDGQLGH-----GDAEDRLSPTQLSALD 65
Query: 282 GIFIKDVACGGVHSCALT-SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI 340
I V CG H+ A + S+ +Y+WG G+LG G + F+ +P ++ R
Sbjct: 66 DHQIVSVTCGADHTVAYSESRMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIR---- 121
Query: 341 LVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVR 399
++ +ACG SH L +G + WG N GQ + + P + G ++
Sbjct: 122 ------IKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIK 175
Query: 400 KLAAGGGHSAVLADACSL 417
+AAG H+A + + L
Sbjct: 176 MVAAGAEHTAAVTEDGDL 193
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 66/164 (40%), Gaps = 30/164 (18%)
Query: 4 NEIIGETA---RPVDNIPAKSAIYVWGYNHSGQTG-----RKGRERQLRIPKQLPPELFG 55
N +I + + R + + +Y WG+N GQ G + Q+RIP
Sbjct: 275 NSVISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRIPD-------- 326
Query: 56 CPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
+ + + ++CG HT AV +F WG GQLG G R P+ ++ L +
Sbjct: 327 -----DQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESLDRNFPKIIEALSVDG 381
Query: 116 VKSISCGAHCTAAIAEPRENDGTISTSRLWV-----WGQNQGSN 154
+ G H ++ +P +S S + GQ GSN
Sbjct: 382 ----ASGQHIESSNFDPSSGKSWVSPSERYAVVPDETGQTDGSN 421
>gi|147782117|emb|CAN67581.1| hypothetical protein VITISV_010346 [Vitis vinifera]
Length = 423
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/322 (32%), Positives = 162/322 (50%), Gaps = 48/322 (14%)
Query: 63 RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG 122
R L I+ G H+ A+ + +WG E GQLG G E R P + L V S++CG
Sbjct: 17 RVLLISAGASHSVALLXGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDGHEVVSVTCG 76
Query: 123 AHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-------ICQVSCG 175
A T A +E S ++++ WG + FTP I I Q++CG
Sbjct: 77 ADHTTAYSE--------SFTQVYSWGCD-----------LFTPQPIKALHGLRIKQIACG 117
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
H +A++ G +Q+WG N+ GQLG G T + L P+ I+ + + V+
Sbjct: 118 DSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLV-PQKIQAFQGV--------SVKMVAA 168
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
G H+AAV+E+GE+Y WG G G LG L + L+P +V ++G+ + VACG H+
Sbjct: 169 GAEHTAAVTEDGELYGWGWGRYGNLG---LGDRNDRLVPEKVSTVEGVKMVKVACGWRHT 225
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS 355
+++S G LY +G S+ GQLG G L P++ + N+ + ++ G
Sbjct: 226 ISVSSSGGLYTYGWSKYGQLGHG--DFEDHLTPHKLEALQENL--------ISEISGGWR 275
Query: 356 HTLVYMRDGRIHGWGYNSYGQA 377
HT+ DG+++GWG+N +GQ
Sbjct: 276 HTMALTSDGKLYGWGWNKFGQV 297
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 138/292 (47%), Gaps = 50/292 (17%)
Query: 63 RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG 122
R IACG H AV DG + +WG N+ GQLG GT E P+K++ Q VK ++ G
Sbjct: 110 RIKQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAG 169
Query: 123 AHCTAAIAEPRENDGTISTSRLWVWGQ----NQGSNFPRLFWGAFTP--NTIICQVSCGS 176
A TAA+ E E G W WG+ G RL + + +V+CG
Sbjct: 170 AEHTAAVTEDGELYG-------WGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGW 222
Query: 177 VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG 236
H +++S G L +G+++YGQLG G + L ++ EA + I+++S G
Sbjct: 223 RHTISVSSSGGLYTYGWSKYGQLGHGDFEDHLTPHKL---------EALQENLISEISGG 273
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLG------HCSLQSGDKELLPRRVVALDGIFIKDVAC 290
H+ A++ +G++Y WG GQ+G HCS P +V + ++C
Sbjct: 274 WRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCS---------PVQVKFPHEQKVVHISC 324
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
G H+ A+T + +++WG GQLG G ++ RNIP ++
Sbjct: 325 GWRHTLAVTERQNVFSWGRGTNGQLGHG-------------ESIDRNIPKMI 363
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 119/255 (46%), Gaps = 36/255 (14%)
Query: 165 PNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
P + +S G+ H VAL ++ +WG E GQLG G + R+ Y LD
Sbjct: 14 PVRRVLLISAGASHSVALLXGNVVCSWGRGEDGQLGHGDAED-----RLSPTYLSALDG- 67
Query: 225 PELEKITQVSCGEYHSAAVSEN-GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
++ V+CG H+ A SE+ +VY+WG C L P+ + AL G+
Sbjct: 68 ---HEVVSVTCGADHTTAYSESFTQVYSWG---------CDL------FTPQPIKALHGL 109
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
IK +ACG H A+T G + +WG +Q GQLGLG T SL+P + F+ +
Sbjct: 110 RIKQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLG--TTEDSLVPQKIQA-FQGVS---- 162
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLA 402
V++VA G HT DG ++GWG+ YG P V G ++ K+A
Sbjct: 163 ---VKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVA 219
Query: 403 AGGGHSAVLADACSL 417
G H+ ++ + L
Sbjct: 220 CGWRHTISVSSSGGL 234
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 89/206 (43%), Gaps = 25/206 (12%)
Query: 5 EIIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRW 64
+++ A + +Y WG+ G G R +L PE G +
Sbjct: 164 KMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRN------DRLVPEKVSTVEGV--KM 215
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
+ +ACG HT +V+S G L+T+G +++GQLG G E P K++ LQ + IS G
Sbjct: 216 VKVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHLTPHKLEALQENLISEISGGWR 275
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQ------GSNFPRL--FWGAFTPNTIICQVSCGS 176
T A+ S +L+ WG N+ G N F + +SCG
Sbjct: 276 HTMALT---------SDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPHEQKVVHISCGW 326
Query: 177 VHVVALSECGLLQAWGYNEYGQLGRG 202
H +A++E + +WG GQLG G
Sbjct: 327 RHTLAVTERQNVFSWGRGTNGQLGHG 352
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 22/145 (15%)
Query: 3 INEIIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLR-IPKQLPPELFGCPAGAN 61
I+EI G R + + +Y WG+N GQ G + + P E
Sbjct: 267 ISEISG-GWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPHE--------- 316
Query: 62 SRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC 121
+ + I+CG HT AV +F+WG GQLG G R P+ ++ L ++ S
Sbjct: 317 QKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESIDRNIPKMIEVLSADG----SG 372
Query: 122 GAHCTAAIAEPRENDGTISTSRLWV 146
G + +P ST R+WV
Sbjct: 373 GQQIETSKVDP-------STGRIWV 390
>gi|224093583|ref|XP_002309939.1| predicted protein [Populus trichocarpa]
gi|222852842|gb|EEE90389.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 108/324 (33%), Positives = 161/324 (49%), Gaps = 48/324 (14%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
I+ G H+ A+ S + +WG E GQLG G E R P ++ L + SI+CGA T
Sbjct: 23 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRPTPTQLSTLDGLDIISITCGADHT 82
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCG 175
+ +E R W WG +F RL G FTP I I Q++CG
Sbjct: 83 TSYSESRME------VYSWGWG-----DFGRLGHGNSSDLFTPQPIKALHSLKIRQIACG 131
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
H +A++ G +Q+WG N+ GQLG G T + L P+ I+ + I V+
Sbjct: 132 DSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLV-PQKIQAFQGV--------SIKMVAA 182
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
G H+AAV+E+GE+Y WG G G LG L + L+P +V ++G + VACG H+
Sbjct: 183 GAEHTAAVTEDGELYGWGWGRYGNLG---LGDRNDRLVPEKVSLVNGDKMIMVACGWRHT 239
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNES--DTYFRNIPILVVPNGVQLVACG 353
+++S G LY +G S+ GQLG G + E+ D+Y + +++ G
Sbjct: 240 ISVSSSGGLYTYGWSKYGQLGHGDFEDHLTPHKVEALRDSY------------ISMISGG 287
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQA 377
HT+ DG ++GWG+N +GQ
Sbjct: 288 WRHTMALTSDGNLYGWGWNKFGQV 311
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 172/392 (43%), Gaps = 53/392 (13%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA-SDGTLF 84
WG GQ G G P QL L G + I CG +HT + + S ++
Sbjct: 42 WGRGEDGQLGH-GDAEDRPTPTQLST-LDGLDI------ISITCGADHTTSYSESRMEVY 93
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGTISTSR 143
+WG +FG+LG G P+ +K L S ++ I+CG +HC A DG + +
Sbjct: 94 SWGWGDFGRLGHGNSSDLFTPQPIKALHSLKIRQIACGDSHCLAVTM-----DGEVQS-- 146
Query: 144 LWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYNE 195
WG+NQ + P I I V+ G+ H A++E G L WG+
Sbjct: 147 ---WGRNQNGQLGLGTTEDSLVPQKIQAFQGVSIKMVAAGAEHTAAVTEDGELYGWGWGR 203
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
YG LG G + R++ ++ +K+ V+CG H+ +VS +G +YT+G
Sbjct: 204 YGNLGLGDRND-----RLVPEKVSLVNG----DKMIMVACGWRHTISVSSSGGLYTYGWS 254
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
GQLGH + L P +V AL +I ++ G H+ ALTS G LY WG ++ GQ+
Sbjct: 255 KYGQLGHGDFE---DHLTPHKVEALRDSYISMISGGWRHTMALTSDGNLYGWGWNKFGQV 311
Query: 316 GLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
G+G S + + P + VQ ++CG HTL + WG + G
Sbjct: 312 GVGDNIDHCSPVQVK-------FPHEQAHSLVQ-ISCGWRHTLAITERQNVFSWGRGTNG 363
Query: 376 QAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH 407
Q + +S P + EV GGH
Sbjct: 364 QLGHGESMDRNLPKII-----EVLSADGSGGH 390
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 150/336 (44%), Gaps = 56/336 (16%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
++ +Y WG+ G+ G G L P+ + A + + IACG H AV
Sbjct: 88 SRMEVYSWGWGDFGRLGH-GNSSDLFTPQPIK-------ALHSLKIRQIACGDSHCLAVT 139
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG + +WG N+ GQLG GT E P+K++ Q +K ++ GA TAA+ E E G
Sbjct: 140 MDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSIKMVAAGAEHTAAVTEDGELYG- 198
Query: 139 ISTSRLWVWGQ----NQGSNFPRLF--WGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
W WG+ G RL + + V+CG H +++S G L +G
Sbjct: 199 ------WGWGRYGNLGLGDRNDRLVPEKVSLVNGDKMIMVACGWRHTISVSSSGGLYTYG 252
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
+++YGQLG G + L +V EA I+ +S G H+ A++ +G +Y W
Sbjct: 253 WSKYGQLGHGDFEDHLTPHKV---------EALRDSYISMISGGWRHTMALTSDGNLYGW 303
Query: 253 GLGSVGQLG------HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
G GQ+G HCS + + + ++CG H+ A+T + +++
Sbjct: 304 GWNKFGQVGVGDNIDHCS-------PVQVKFPHEQAHSLVQISCGWRHTLAITERQNVFS 356
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
WG GQLG G ++ RN+P ++
Sbjct: 357 WGRGTNGQLGHG-------------ESMDRNLPKII 379
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 91/195 (46%), Gaps = 19/195 (9%)
Query: 227 LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIF 284
+ ++ +S G HS A+ V +WG G GQLGH GD E P ++ LDG+
Sbjct: 17 IRQVILISAGASHSVALLSGNIVCSWGRGEDGQLGH-----GDAEDRPTPTQLSTLDGLD 71
Query: 285 IKDVACGGVHSCALT-SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
I + CG H+ + + S+ +Y+WG G+LG G + F+ P ++ +
Sbjct: 72 IISITCGADHTTSYSESRMEVYSWGWGDFGRLGHGNSSDLFTPQPIKALHSLK------- 124
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLA 402
++ +ACG SH L DG + WG N GQ + + P + G ++ +A
Sbjct: 125 ---IRQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSIKMVA 181
Query: 403 AGGGHSAVLADACSL 417
AG H+A + + L
Sbjct: 182 AGAEHTAAVTEDGEL 196
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 51/125 (40%), Gaps = 20/125 (16%)
Query: 23 IYVWGYNHSGQTGRKGR-----ERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAV 77
+Y WG+N GQ G Q++ P + L + I+CG HT A+
Sbjct: 300 LYGWGWNKFGQVGVGDNIDHCSPVQVKFPHEQAHSL-----------VQISCGWRHTLAI 348
Query: 78 ASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG 137
+F+WG GQLG G R P+ ++ L ++ S G A+ +P
Sbjct: 349 TERQNVFSWGRGTNGQLGHGESMDRNLPKIIEVLSADG----SGGHQIEASTVDPSLGKS 404
Query: 138 TISTS 142
+S S
Sbjct: 405 WVSPS 409
>gi|387193358|gb|AFJ68699.1| hypothetical protein NGATSA_3056200, partial [Nannochloropsis
gaditana CCMP526]
Length = 511
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 199/437 (45%), Gaps = 62/437 (14%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S +Y WG GQ G Q ++P + G + + IACG HT + D
Sbjct: 6 SMLYSWGRGEDGQCGNGSTNDQ-----EMPMPVEGLK---HLTVVQIACGSGHTVVLTED 57
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+++WG + G+LG + P V L + +K ++CG++ TAAI++
Sbjct: 58 KDVWSWGRGDDGRLGHADNHWKYVPHLVSALTGKSIKQVTCGSYHTAAISD--------- 108
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFTPNTIIC-----------QVSCGSVHVVALSECGLLQ 189
T LW WG G + +L G + C Q++CGS H AL G +
Sbjct: 109 TGALWTWG---GGMYGKLGHGNEVGHPAPCRVEAFIGREVEQIACGSRHTAALLAGGEVY 165
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
WG E G G G E P+ + EA + KITQ++ +H+AA++++G +
Sbjct: 166 CWGDRENGVCGIGEAAEHQYLPKKL--------EALKGVKITQIAACGFHTAAITQDGAL 217
Query: 250 YTWGLGSVGQLGHCSLQSGDK-ELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
++WG G G+LG Q +K ++ P V L G+ +K VACGG HS +T G + +G
Sbjct: 218 WSWGEGKFGRLG----QGNEKNQVTPCCVEGLQGVRVKQVACGGFHSACVTEDGDVLTFG 273
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDGR 365
G + GQLG G +T R +P LV G+ V CG SHT+ DG+
Sbjct: 274 GGEHGQLGHGDKTN-------------RTVPCLVKALEGAGIVQVTCGWSHTVTLSEDGK 320
Query: 366 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSLKELCEFR 424
+ +G +G+ + + + P V+ +V K+A+ H+ L A + + F
Sbjct: 321 VFTFGNGDHGKLGHGANAKSALPKLVESLANMKVAKVASYNEHTVALCHAEQEQAVMSFD 380
Query: 425 LAESV-TLSNASEIEDV 440
+ + L N ++ DV
Sbjct: 381 FLKDLRRLINNADFADV 397
>gi|297797389|ref|XP_002866579.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
gi|297312414|gb|EFH42838.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
Length = 440
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/323 (33%), Positives = 165/323 (51%), Gaps = 44/323 (13%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
L I+ G H+ A+ S + +WG E GQLG G E R P ++ L + S++CGA
Sbjct: 18 LIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGAD 77
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVS 173
T A ++ S ++ WG +F RL G FTP I I Q++
Sbjct: 78 HTVAYSQ--------SGMEVYSWGWG---DFGRLGHGNSSDLFTPLPIKALHGIRIKQIA 126
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
CG H +A++ G +Q+WG N+ GQLG G T + L P+ I+ + E +I V
Sbjct: 127 CGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV-PQKIQAF--------EGIRIKMV 177
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
+ G H+AAV+E+G++Y WG G G LG L + L+P RV + G + VACG
Sbjct: 178 AAGAEHTAAVTEDGDLYGWGWGRYGNLG---LGDRNDRLVPERVTSAGGEKMSMVACGWR 234
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG 353
H+ +++ GALY +G S+ GQLG G LIP++ + + + ++ G
Sbjct: 235 HTISVSYSGALYTYGWSKYGQLGHGDLED--HLIPHKLEALSNSF--------ISQISGG 284
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQ 376
HT+ DG+++GWG+N +GQ
Sbjct: 285 WRHTMALTSDGKLYGWGWNKFGQ 307
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 172/383 (44%), Gaps = 62/383 (16%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT-LF 84
WG GQ G E + P QL A + + + CG +HT A + G ++
Sbjct: 39 WGRGEDGQLGHGDAEDRPS-PTQLS-------ALDGHQIVSVTCGADHTVAYSQSGMEVY 90
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGTISTSR 143
+WG +FG+LG G P +K L +K I+CG +HC A E G + +
Sbjct: 91 SWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTME-----GEVQS-- 143
Query: 144 LWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAWG 192
WG+NQ +L G + P I I V+ G+ H A++E G L WG
Sbjct: 144 ---WGRNQNG---QLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWG 197
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
+ YG LG G + L RV EK++ V+CG H+ +VS +G +YT+
Sbjct: 198 WGRYGNLGLGDRNDRLVPERVTSAGG---------EKMSMVACGWRHTISVSYSGALYTY 248
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G GQLGH L+ L+P ++ AL FI ++ G H+ ALTS G LY WG ++
Sbjct: 249 GWSKYGQLGHGDLE---DHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKF 305
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQLV--ACGHSHTLVYMRDGRIHGW 369
GQ+G+G S P+ V P+ ++V +CG HTL + W
Sbjct: 306 GQVGVGNNLDQCS-------------PVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAW 352
Query: 370 GYNSYGQAANEKSTYAWYPSPVD 392
G + GQ +S +P ++
Sbjct: 353 GRGTNGQLGIGESVDRNFPKIIE 375
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 150/313 (47%), Gaps = 36/313 (11%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPE-LFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG+ G+ G G L P LP + L G R IACG H AV +G
Sbjct: 89 VYSWGWGDFGRLGH-GNSSDLFTP--LPIKALHGI------RIKQIACGDSHCLAVTMEG 139
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+ +WG N+ GQLG G E P+K++ + +K ++ GA TAA+ E DG +
Sbjct: 140 EVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE----DGDLYG 195
Query: 142 SRLWVWGQ----NQGSNFPRLFWGAFTP--NTIICQVSCGSVHVVALSECGLLQAWGYNE 195
W WG+ G RL T + V+CG H +++S G L +G+++
Sbjct: 196 ---WGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGALYTYGWSK 252
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
YGQLG G + L ++ EA I+Q+S G H+ A++ +G++Y WG
Sbjct: 253 YGQLGHGDLEDHLIPHKL---------EALSNSFISQISGGWRHTMALTSDGKLYGWGWN 303
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
GQ+G + + + P +V D + V+CG H+ A+T + ++AWG GQL
Sbjct: 304 KFGQVG---VGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQL 360
Query: 316 GLGPQT-RSFSLI 327
G+G R+F I
Sbjct: 361 GIGESVDRNFPKI 373
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/242 (35%), Positives = 118/242 (48%), Gaps = 24/242 (9%)
Query: 165 PNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
P T++ +S G+ H VAL ++ +WG E GQLG G E P + A
Sbjct: 14 PRTVLI-ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLS--------A 63
Query: 225 PELEKITQVSCGEYHSAAVSENG-EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
+ +I V+CG H+ A S++G EVY+WG G G+LGH + S D P + AL GI
Sbjct: 64 LDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGN--SSDL-FTPLPIKALHGI 120
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
IK +ACG H A+T +G + +WG +Q GQLGLG S L+P + F I I
Sbjct: 121 RIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDS--LVPQKIQA-FEGIRI--- 174
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 403
++VA G HT DG ++GWG+ YG P V GE + A
Sbjct: 175 ----KMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVA 230
Query: 404 GG 405
G
Sbjct: 231 CG 232
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 12/124 (9%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y WG+N GQ G Q + P+ + + + ++CG HT A
Sbjct: 291 LTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPD--------DQKVVQVSCGWRHTLA 342
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V +F WG GQLG G R P+ ++ L + + G H ++ +P
Sbjct: 343 VTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVDG----ASGQHIESSNIDPSSGK 398
Query: 137 GTIS 140
+S
Sbjct: 399 SWVS 402
>gi|449457319|ref|XP_004146396.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
sativus]
Length = 438
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 166/326 (50%), Gaps = 44/326 (13%)
Query: 63 RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG 122
R L I+ G H+ A+ S + +WG E GQLG G E R P ++ L + S++CG
Sbjct: 9 RVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCG 68
Query: 123 AHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQ 171
A T A + R + W WG +F RL G TP I I Q
Sbjct: 69 ADHTTAYSVAR------TEVYSWGWG-----DFGRLGHGNSSDLLTPKPIKALHGLKIRQ 117
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
++CG H +A++ G +Q+WG N+ GQLG G T + L P+ I+ + E I
Sbjct: 118 IACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLV-PQKIQAF--------EGISIK 168
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
V+ G H+AAV+E+GE++ WG G G LG L + L+P++V ++DG + VACG
Sbjct: 169 MVAAGAEHTAAVTEDGELFGWGWGRYGNLG---LGDRNDRLVPQKVSSVDGDKMVMVACG 225
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVA 351
H+ +++S G LY +G S+ GQLG G L+P+ + + + + ++
Sbjct: 226 WRHTISVSSLGGLYTYGWSKYGQLGHG--DFEDRLVPHRLEA--------LRGDNISQIS 275
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQA 377
G HT+ DG+++GWG+N +GQ
Sbjct: 276 GGWRHTMALTTDGKLYGWGWNKFGQV 301
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 168/387 (43%), Gaps = 55/387 (14%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT-LF 84
WG GQ G E +L P QL A + + CG +HT A + T ++
Sbjct: 32 WGRGEDGQLGHGDAEDRLS-PTQLS-------ALDGHEIVSVTCGADHTTAYSVARTEVY 83
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGTISTSR 143
+WG +FG+LG G P+ +K L ++ I+CG +HC A E G + +
Sbjct: 84 SWGWGDFGRLGHGNSSDLLTPKPIKALHGLKIRQIACGDSHCLAVTME-----GEVQS-- 136
Query: 144 LWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYNE 195
WG+NQ + P I I V+ G+ H A++E G L WG+
Sbjct: 137 ---WGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGR 193
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
YG LG G + L +V + + +K+ V+CG H+ +VS G +YT+G
Sbjct: 194 YGNLGLGDRNDRLVPQKV---------SSVDGDKMVMVACGWRHTISVSSLGGLYTYGWS 244
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
GQLGH + L+P R+ AL G I ++ G H+ ALT+ G LY WG ++ GQ+
Sbjct: 245 KYGQLGHGDFED---RLVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQV 301
Query: 316 GLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
G G S I + + I I +CG HTL + WG + G
Sbjct: 302 GAGDNIDHCSPIQIKFPQDQKVIQI----------SCGWRHTLAVTDKQNVFSWGRGTNG 351
Query: 376 QAANEKSTYAWYPS-----PVDWCVGE 397
Q + +S P VD C G+
Sbjct: 352 QLGHGESVDRNTPMILEALSVDGCSGQ 378
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 156/341 (45%), Gaps = 68/341 (19%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A++ +Y WG+ G+ G G L PK + L G + IACG H AV
Sbjct: 78 ARTEVYSWGWGDFGRLGH-GNSSDLLTPKPIKA-LHGL------KIRQIACGDSHCLAVT 129
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
+G + +WG N+ GQLG GT E P+K++ + +K ++ GA TAA+ E E G
Sbjct: 130 MEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFG- 188
Query: 139 ISTSRLWVWGQ----NQGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
W WG+ G RL P + + V+CG H +++S G
Sbjct: 189 ------WGWGRYGNLGLGDRNDRLV-----PQKVSSVDGDKMVMVACGWRHTISVSSLGG 237
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
L +G+++YGQLG G + L R+ EA + I+Q+S G H+ A++ +G
Sbjct: 238 LYTYGWSKYGQLGHGDFEDRLVPHRL---------EALRGDNISQISGGWRHTMALTTDG 288
Query: 248 EVYTWGLGSVGQLG------HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
++Y WG GQ+G HCS P ++ + ++CG H+ A+T K
Sbjct: 289 KLYGWGWNKFGQVGAGDNIDHCS---------PIQIKFPQDQKVIQISCGWRHTLAVTDK 339
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
+++WG GQLG G ++ RN P+++
Sbjct: 340 QNVFSWGRGTNGQLGHG-------------ESVDRNTPMIL 367
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 111/215 (51%), Gaps = 23/215 (10%)
Query: 162 AFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFL 221
A +P + +S G+ H VAL ++ +WG E GQLG G + L ++
Sbjct: 3 ATSPVRRVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQL-------- 54
Query: 222 DEAPELEKITQVSCGEYHSAAVS-ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL 280
A + +I V+CG H+ A S EVY+WG G G+LGH + S D L P+ + AL
Sbjct: 55 -SALDGHEIVSVTCGADHTTAYSVARTEVYSWGWGDFGRLGHGN--SSDL-LTPKPIKAL 110
Query: 281 DGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI 340
G+ I+ +ACG H A+T +G + +WG +Q GQLGLG T SL+P + F I I
Sbjct: 111 HGLKIRQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLG--TTEDSLVPQKIQA-FEGISI 167
Query: 341 LVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
++VA G HT DG + GWG+ YG
Sbjct: 168 -------KMVAAGAEHTAAVTEDGELFGWGWGRYG 195
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 19/201 (9%)
Query: 221 LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVV 278
++ + ++ +S G HS A+ V +WG G GQLGH GD E L P ++
Sbjct: 1 MEATSPVRRVLFISAGASHSVALLSGNIVCSWGRGEDGQLGH-----GDAEDRLSPTQLS 55
Query: 279 ALDGIFIKDVACGGVHSCALT-SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRN 337
ALDG I V CG H+ A + ++ +Y+WG G+LG G + + P ++ +
Sbjct: 56 ALDGHEIVSVTCGADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLLTPKPIKALHGLK- 114
Query: 338 IPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG- 396
++ +ACG SH L +G + WG N GQ + + P + G
Sbjct: 115 ---------IRQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGI 165
Query: 397 EVRKLAAGGGHSAVLADACSL 417
++ +AAG H+A + + L
Sbjct: 166 SIKMVAAGAEHTAAVTEDGEL 186
>gi|88855032|ref|ZP_01129697.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
gi|88815560|gb|EAR25417.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
Length = 524
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 118/380 (31%), Positives = 162/380 (42%), Gaps = 53/380 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
IY WGYN SGQ G I P L P G + ++ G +H+ AV SDG
Sbjct: 70 IYAWGYNSSGQLGNN------SILNSSVPVLVSTPDGVT--FTQVSAGADHSLAVGSDGN 121
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ WG N G+LG+GT G P V ++ G + +A + S
Sbjct: 122 AYAWGRNTDGRLGNGTSTGSSVPLLVSA------GAVPSGVTISQVMAGGFHSLAVGSNG 175
Query: 143 RLWVWGQNQ----------GSNFP-RLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
++ WG N+ S+ P ++ GA QVS G H +A+ G AW
Sbjct: 176 DIYSWGYNRSGQLGDGTTLASSVPLKVSAGAVPAGVTFSQVSAGDRHSLAIGSNGKTYAW 235
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G GQLG G + + A L AP TQVS G+ HS AV +G+ Y
Sbjct: 236 GEARGGQLGIG---------SISRTPAPALVSAPAGVSFTQVSAGDLHSLAVGSDGKAYA 286
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG GQLG+ + S L P V + G+ + V+ G HS A+ + G YAWG +
Sbjct: 287 WGNNDSGQLGNATTTS---SLAPVLVSPMGGLAVTQVSAGADHSLAIGADGNAYAWGLNV 343
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVV-PNGVQL--VACGHSHTLVYMRDGRIHG 368
GQLG T S +P++V P+GV + G H+L D +
Sbjct: 344 NGQLGNNTITTS-------------TVPVMVTAPDGVTFTRIEAGGLHSLTAASDENTYT 390
Query: 369 WGYNSYGQAANEKSTYAWYP 388
WG NS+GQ N S + P
Sbjct: 391 WGANSFGQLGNGTSDGSLVP 410
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/357 (31%), Positives = 155/357 (43%), Gaps = 40/357 (11%)
Query: 64 WLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA 123
+ ++ G H+ A+ SDG ++ WG N GQLG+ + P V +S GA
Sbjct: 51 FTQVSAGINHSLAMGSDGNIYAWGYNSSGQLGNNSILNSSVPVLVSTPDGVTFTQVSAGA 110
Query: 124 HCTAAIAEP-------RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-ICQVSCG 175
+ A+ R DG + G + GS+ P L P+ + I QV G
Sbjct: 111 DHSLAVGSDGNAYAWGRNTDGRLGN------GTSTGSSVPLLVSAGAVPSGVTISQVMAG 164
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
H +A+ G + +WGYN GQLG G T +V G P +QVS
Sbjct: 165 GFHSLAVGSNGDIYSWGYNRSGQLGDGTTLASSVPLKVSAG------AVPAGVTFSQVSA 218
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
G+ HS A+ NG+ Y WG GQLG S+ + P V A G+ V+ G +HS
Sbjct: 219 GDRHSLAIGSNGKTYAWGEARGGQLGIGSIS---RTPAPALVSAPAGVSFTQVSAGDLHS 275
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG---VQLVAC 352
A+ S G YAWG + +GQLG T S + P+LV P G V V+
Sbjct: 276 LAVGSDGKAYAWGNNDSGQLGNATTTSSLA-------------PVLVSPMGGLAVTQVSA 322
Query: 353 GHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
G H+L DG + WG N GQ N T + P V G ++ AGG HS
Sbjct: 323 GADHSLAIGADGNAYAWGLNVNGQLGNNTITTSTVPVMVTAPDGVTFTRIEAGGLHS 379
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 122/296 (41%), Gaps = 56/296 (18%)
Query: 165 PNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
P + QVS G H +A+ G + AWGYN GQLG ++ L
Sbjct: 47 PGVVFTQVSAGINHSLAMGSDGNIYAWGYNSSGQLGNN---------SILNSSVPVLVST 97
Query: 225 PELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF 284
P+ TQVS G HS AV +G Y WG + G+LG+ + LL G+
Sbjct: 98 PDGVTFTQVSAGADHSLAVGSDGNAYAWGRNTDGRLGNGTSTGSSVPLLVSAGAVPSGVT 157
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLG----------------PQTRSFS--- 325
I V GG HS A+ S G +Y+WG +++GQLG G P +FS
Sbjct: 158 ISQVMAGGFHSLAVGSNGDIYSWGYNRSGQLGDGTTLASSVPLKVSAGAVPAGVTFSQVS 217
Query: 326 -------LIPNESDTYF----------------RNIPILV-VPNGVQL--VACGHSHTLV 359
I + TY P LV P GV V+ G H+L
Sbjct: 218 AGDRHSLAIGSNGKTYAWGEARGGQLGIGSISRTPAPALVSAPAGVSFTQVSAGDLHSLA 277
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
DG+ + WG N GQ N +T + P V G V +++AG HS A+ AD
Sbjct: 278 VGSDGKAYAWGNNDSGQLGNATTTSSLAPVLVSPMGGLAVTQVSAGADHSLAIGAD 333
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 88/231 (38%), Gaps = 42/231 (18%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I + Y WG GQ G I + P L PAG + + ++ G H+ A
Sbjct: 226 IGSNGKTYAWGEARGGQLGIG------SISRTPAPALVSAPAGVS--FTQVSAGDLHSLA 277
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V SDG + WG N+ GQLG+ T P V + V +S GA + AI D
Sbjct: 278 VGSDGKAYAWGNNDSGQLGNATTTSSLAPVLVSPMGGLAVTQVSAGADHSLAIGA----D 333
Query: 137 GTISTSRLWVWGQN----------QGSNFPRLFWGAFTPNTI-ICQVSCGSVHVVALSEC 185
G + WG N S P + P+ + ++ G +H + +
Sbjct: 334 G-----NAYAWGLNVNGQLGNNTITTSTVPVMV---TAPDGVTFTRIEAGGLHSLTAASD 385
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG 236
WG N +GQLG G T +G P I IT+VS G
Sbjct: 386 ENTYTWGANSFGQLGNG-TSDGSLVPVAIS----------RFPVITEVSFG 425
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 16/112 (14%)
Query: 280 LDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIP 339
L G+ V+ G HS A+ S G +YAWG + +GQLG + ++P
Sbjct: 46 LPGVVFTQVSAGINHSLAMGSDGNIYAWGYNSSGQLG-------------NNSILNSSVP 92
Query: 340 ILV-VPNGVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYP 388
+LV P+GV V+ G H+L DG + WG N+ G+ N ST + P
Sbjct: 93 VLVSTPDGVTFTQVSAGADHSLAVGSDGNAYAWGRNTDGRLGNGTSTGSSVP 144
>gi|15237540|ref|NP_201191.1| protein UV-B resistance 8 [Arabidopsis thaliana]
gi|10177674|dbj|BAB11034.1| UVB-resistance protein UVR8 [Arabidopsis thaliana]
gi|21928123|gb|AAM78089.1| AT5g63860/MGI19_6 [Arabidopsis thaliana]
gi|23308399|gb|AAN18169.1| At5g63860/MGI19_6 [Arabidopsis thaliana]
gi|332010422|gb|AED97805.1| protein UV-B resistance 8 [Arabidopsis thaliana]
Length = 440
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/323 (33%), Positives = 164/323 (50%), Gaps = 44/323 (13%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
L I+ G H+ A+ S + +WG E GQLG G E R P ++ L + S++CGA
Sbjct: 18 LIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGAD 77
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVS 173
T A ++ S ++ WG +F RL G FTP I I Q++
Sbjct: 78 HTVAYSQ--------SGMEVYSWGWG---DFGRLGHGNSSDLFTPLPIKALHGIRIKQIA 126
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
CG H +A++ G +Q+WG N+ GQLG G T + L P+ I+ + E +I V
Sbjct: 127 CGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV-PQKIQAF--------EGIRIKMV 177
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
+ G H+AAV+E+G++Y WG G G LG L L+P RV + G + VACG
Sbjct: 178 AAGAEHTAAVTEDGDLYGWGWGRYGNLG---LGDRTDRLVPERVTSTGGEKMSMVACGWR 234
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG 353
H+ +++ GALY +G S+ GQLG G LIP++ + + + ++ G
Sbjct: 235 HTISVSYSGALYTYGWSKYGQLGHGDLED--HLIPHKLEALSNSF--------ISQISGG 284
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQ 376
HT+ DG+++GWG+N +GQ
Sbjct: 285 WRHTMALTSDGKLYGWGWNKFGQ 307
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 172/383 (44%), Gaps = 62/383 (16%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT-LF 84
WG GQ G E + P QL A + + + CG +HT A + G ++
Sbjct: 39 WGRGEDGQLGHGDAEDRPS-PTQLS-------ALDGHQIVSVTCGADHTVAYSQSGMEVY 90
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGTISTSR 143
+WG +FG+LG G P +K L +K I+CG +HC A E G + +
Sbjct: 91 SWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTME-----GEVQS-- 143
Query: 144 LWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAWG 192
WG+NQ +L G + P I I V+ G+ H A++E G L WG
Sbjct: 144 ---WGRNQNG---QLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWG 197
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
+ YG LG G + L RV EK++ V+CG H+ +VS +G +YT+
Sbjct: 198 WGRYGNLGLGDRTDRLVPERVTSTGG---------EKMSMVACGWRHTISVSYSGALYTY 248
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G GQLGH L+ L+P ++ AL FI ++ G H+ ALTS G LY WG ++
Sbjct: 249 GWSKYGQLGHGDLE---DHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKF 305
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQLV--ACGHSHTLVYMRDGRIHGW 369
GQ+G+G S P+ V P+ ++V +CG HTL + W
Sbjct: 306 GQVGVGNNLDQCS-------------PVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAW 352
Query: 370 GYNSYGQAANEKSTYAWYPSPVD 392
G + GQ +S +P ++
Sbjct: 353 GRGTNGQLGIGESVDRNFPKIIE 375
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 150/313 (47%), Gaps = 36/313 (11%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPE-LFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG+ G+ G G L P LP + L G R IACG H AV +G
Sbjct: 89 VYSWGWGDFGRLGH-GNSSDLFTP--LPIKALHGI------RIKQIACGDSHCLAVTMEG 139
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+ +WG N+ GQLG G E P+K++ + +K ++ GA TAA+ E DG +
Sbjct: 140 EVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE----DGDLYG 195
Query: 142 SRLWVWGQ----NQGSNFPRLFWGAFTPN--TIICQVSCGSVHVVALSECGLLQAWGYNE 195
W WG+ G RL T + V+CG H +++S G L +G+++
Sbjct: 196 ---WGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSK 252
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
YGQLG G + L ++ EA I+Q+S G H+ A++ +G++Y WG
Sbjct: 253 YGQLGHGDLEDHLIPHKL---------EALSNSFISQISGGWRHTMALTSDGKLYGWGWN 303
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
GQ+G + + + P +V D + V+CG H+ A+T + ++AWG GQL
Sbjct: 304 KFGQVG---VGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQL 360
Query: 316 GLGPQT-RSFSLI 327
G+G R+F I
Sbjct: 361 GIGESVDRNFPKI 373
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 115/242 (47%), Gaps = 23/242 (9%)
Query: 165 PNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
P + +S G+ H VAL ++ +WG E GQLG G E P + A
Sbjct: 13 PPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLS--------A 63
Query: 225 PELEKITQVSCGEYHSAAVSENG-EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
+ +I V+CG H+ A S++G EVY+WG G G+LGH + P + AL GI
Sbjct: 64 LDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGN---SSDLFTPLPIKALHGI 120
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
IK +ACG H A+T +G + +WG +Q GQLGLG S L+P + F I I
Sbjct: 121 RIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDS--LVPQKIQA-FEGIRI--- 174
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 403
++VA G HT DG ++GWG+ YG T P V GE + A
Sbjct: 175 ----KMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVA 230
Query: 404 GG 405
G
Sbjct: 231 CG 232
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 90/193 (46%), Gaps = 19/193 (9%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPR--RVVALDGIFIK 286
K+ +S G HS A+ V +WG G GQLGH GD E P ++ ALDG I
Sbjct: 16 KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGH-----GDAEDRPSPTQLSALDGHQIV 70
Query: 287 DVACGGVHSCALTSKGA-LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
V CG H+ A + G +Y+WG G+LG G + F+ +P ++ R
Sbjct: 71 SVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIR--------- 121
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAG 404
++ +ACG SH L +G + WG N GQ + + P + G ++ +AAG
Sbjct: 122 -IKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAG 180
Query: 405 GGHSAVLADACSL 417
H+A + + L
Sbjct: 181 AEHTAAVTEDGDL 193
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 12/124 (9%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y WG+N GQ G Q + P+ + + + ++CG HT A
Sbjct: 291 LTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPD--------DQKVVQVSCGWRHTLA 342
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V +F WG GQLG G R P+ ++ L + + G H ++ +P
Sbjct: 343 VTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVDG----ASGQHIESSNIDPSSGK 398
Query: 137 GTIS 140
+S
Sbjct: 399 SWVS 402
>gi|384249755|gb|EIE23236.1| UVB-resistance 8 [Coccomyxa subellipsoidea C-169]
Length = 434
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 175/364 (48%), Gaps = 45/364 (12%)
Query: 63 RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG 122
R ++CG H+ A+ S+G +WG E GQLG G E RK P + L ++ G
Sbjct: 15 RVTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGDAEERKKPRAIFHLMQASCSAVCSG 74
Query: 123 AHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQ 171
A + A+++PR W WG +F RL G F P I I +
Sbjct: 75 AEYSVALSQPRNE------VYSWGWG-----DFGRLGHGDCNDVFIPQPIRALAGRNIVK 123
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
V+CG H +A+++ G L ++G N+ GQLG G T + + P+ + E+ +++T
Sbjct: 124 VACGDTHTLAVTDTGELFSFGRNQNGQLGLGTTSDAIL-PQPV--------ESLRGQEVT 174
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
++CG HS A + G+V+ WG G G LG + + LP +V L+G+ + VACG
Sbjct: 175 SIACGGEHSLAATSAGDVFAWGWGRYGNLG---VGPPEDRHLPSQVHGLEGVKVTSVACG 231
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVA 351
HS A GA+Y +G S+ GQLG G L+P ++ + + + L+A
Sbjct: 232 WRHSIAADETGAVYTFGWSKYGQLGHGDCID--QLVPKAVES--------LKDSRIVLIA 281
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAV 410
G HT G+++ WG+N +GQ +T + P PV V+ L+ G H+
Sbjct: 282 GGWRHTSAADDSGKLYSWGWNKFGQLGIGSNTDSNAPVPVQGLNTSPVKLLSCGWRHTFA 341
Query: 411 LADA 414
+ +A
Sbjct: 342 VTEA 345
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 149/307 (48%), Gaps = 41/307 (13%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
++ +Y WG+ G+ G G + IP+ + A A + +ACG HT AV
Sbjct: 85 RNEVYSWGWGDFGRLGH-GDCNDVFIPQPIR-------ALAGRNIVKVACGDTHTLAVTD 136
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGT 138
G LF++G N+ GQLG GT P+ V+ L+ + V SI+CG H AA + G
Sbjct: 137 TGELFSFGRNQNGQLGLGTTSDAILPQPVESLRGQEVTSIACGGEHSLAATSA-----GD 191
Query: 139 ISTSRLWVWGQ--NQGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQ 189
+ W WG+ N G P P+ + + V+CG H +A E G +
Sbjct: 192 VFA---WGWGRYGNLGVGPPE---DRHLPSQVHGLEGVKVTSVACGWRHSIAADETGAVY 245
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
+G+++YGQLG G + L P+ + E+ + +I ++ G H++A ++G++
Sbjct: 246 TFGWSKYGQLGHGDCIDQLV-PKAV--------ESLKDSRIVLIAGGWRHTSAADDSGKL 296
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
Y+WG GQLG + S P V L+ +K ++CG H+ A+T G +++WG
Sbjct: 297 YSWGWNKFGQLG---IGSNTDSNAPVPVQGLNTSPVKLLSCGWRHTFAVTEAGDVFSWGR 353
Query: 310 SQAGQLG 316
GQLG
Sbjct: 354 GVNGQLG 360
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 132/277 (47%), Gaps = 42/277 (15%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHC 125
IACG EH+ A S G +F WG +G LG G E R P +V L+ V S++CG H
Sbjct: 176 IACGGEHSLAATSAGDVFAWGWGRYGNLGVGPPEDRHLPSQVHGLEGVKVTSVACGWRHS 235
Query: 126 TAAIAEPRENDGTISTSRLWVWGQ-NQGSNFPRLFWGAF--TPNTIICQVSCGSVHVVAL 182
AA + G + T +GQ G +L A ++ I ++ G H A
Sbjct: 236 IAA-----DETGAVYTFGWSKYGQLGHGDCIDQLVPKAVESLKDSRIVLIAGGWRHTSAA 290
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
+ G L +WG+N++GQLG G + P ++G L+ +P + +SCG H+ A
Sbjct: 291 DDSGKLYSWGWNKFGQLGIGSNTDS-NAPVPVQG----LNTSP----VKLLSCGWRHTFA 341
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV--VALDGIFIKDVACGGVHSCALTS 300
V+E G+V++WG G GQLGH + + P R+ +++ I ++D+ GV + LT+
Sbjct: 342 VTEAGDVFSWGRGVNGQLGHNEPKDTNA---PVRLAELSMGSIKLEDL---GVSASPLTT 395
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRN 337
Y P ++++P+ SD N
Sbjct: 396 ----YV------------PPADRYAVVPDHSDAAPEN 416
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 12/97 (12%)
Query: 23 IYVWGYNHSGQTG-RKGRERQLRIPKQLPPELFGCPAGANSRWLDI-ACGHEHTAAVASD 80
+Y WG+N GQ G + +P Q G N+ + + +CG HT AV
Sbjct: 296 LYSWGWNKFGQLGIGSNTDSNAPVPVQ----------GLNTSPVKLLSCGWRHTFAVTEA 345
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVK 117
G +F+WG GQLG + P ++ +L +K
Sbjct: 346 GDVFSWGRGVNGQLGHNEPKDTNAPVRLAELSMGSIK 382
>gi|379318631|pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318632|pdb|4DNV|B Chain B, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318633|pdb|4DNV|C Chain C, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318634|pdb|4DNV|D Chain D, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
Length = 370
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/324 (33%), Positives = 164/324 (50%), Gaps = 44/324 (13%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
L I+ G H+ A+ S + +WG E GQLG G E R P ++ L + S++CGA
Sbjct: 7 LIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGAD 66
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVS 173
T A ++ S ++ WG +F RL G FTP I I Q++
Sbjct: 67 HTVAYSQ--------SGMEVYSWGWG---DFGRLGHGNSSDLFTPLPIKALHGIRIKQIA 115
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
CG H +A++ G +Q+WG N+ GQLG G T + L P+ I+ + E +I V
Sbjct: 116 CGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV-PQKIQAF--------EGIRIKMV 166
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
+ G H+AAV+E+G++Y WG G G LG L L+P RV + G + VACG
Sbjct: 167 AAGAEHTAAVTEDGDLYGWGWGRYGNLG---LGDRTDRLVPERVTSTGGEKMSMVACGWR 223
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG 353
H+ +++ GALY +G S+ GQLG G LIP++ + + + ++ G
Sbjct: 224 HTISVSYSGALYTYGWSKYGQLGHGDLED--HLIPHKLEALSNSF--------ISQISGG 273
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQA 377
HT+ DG+++GWG+N +GQ
Sbjct: 274 FRHTMALTSDGKLYGWGWNKFGQV 297
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 172/383 (44%), Gaps = 62/383 (16%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT-LF 84
WG GQ G E + P QL A + + + CG +HT A + G ++
Sbjct: 28 WGRGEDGQLGHGDAEDRPS-PTQLS-------ALDGHQIVSVTCGADHTVAYSQSGMEVY 79
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGTISTSR 143
+WG +FG+LG G P +K L +K I+CG +HC A E G + +
Sbjct: 80 SWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTME-----GEVQS-- 132
Query: 144 LWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAWG 192
WG+NQ +L G + P I I V+ G+ H A++E G L WG
Sbjct: 133 ---WGRNQNG---QLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWG 186
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
+ YG LG G + L RV EK++ V+CG H+ +VS +G +YT+
Sbjct: 187 WGRYGNLGLGDRTDRLVPERVTSTGG---------EKMSMVACGWRHTISVSYSGALYTY 237
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G GQLGH L+ L+P ++ AL FI ++ G H+ ALTS G LY WG ++
Sbjct: 238 GWSKYGQLGHGDLED---HLIPHKLEALSNSFISQISGGFRHTMALTSDGKLYGWGWNKF 294
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQLV--ACGHSHTLVYMRDGRIHGW 369
GQ+G+G S P+ V P+ ++V +CG HTL + W
Sbjct: 295 GQVGVGNNLDQCS-------------PVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAW 341
Query: 370 GYNSYGQAANEKSTYAWYPSPVD 392
G + GQ +S +P ++
Sbjct: 342 GRGTNGQLGIGESVDRNFPKIIE 364
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 148/312 (47%), Gaps = 34/312 (10%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG+ G+ G G L P LP A R IACG H AV +G
Sbjct: 78 VYSWGWGDFGRLGH-GNSSDLFTP--LP-----IKALHGIRIKQIACGDSHCLAVTMEGE 129
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ +WG N+ GQLG G E P+K++ + +K ++ GA TAA+ E DG +
Sbjct: 130 VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE----DGDLYG- 184
Query: 143 RLWVWGQ----NQGSNFPRLFWGAFTPN--TIICQVSCGSVHVVALSECGLLQAWGYNEY 196
W WG+ G RL T + V+CG H +++S G L +G+++Y
Sbjct: 185 --WGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKY 242
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG G + L ++ EA I+Q+S G H+ A++ +G++Y WG
Sbjct: 243 GQLGHGDLEDHLIPHKL---------EALSNSFISQISGGFRHTMALTSDGKLYGWGWNK 293
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
GQ+G + + + P +V D + V+CG H+ A+T + ++AWG GQLG
Sbjct: 294 FGQVG---VGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG 350
Query: 317 LGPQT-RSFSLI 327
+G R+F I
Sbjct: 351 IGESVDRNFPKI 362
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 115/242 (47%), Gaps = 23/242 (9%)
Query: 165 PNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
P + +S G+ H VAL ++ +WG E GQLG G E P + A
Sbjct: 2 PPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLS--------A 52
Query: 225 PELEKITQVSCGEYHSAAVSENG-EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
+ +I V+CG H+ A S++G EVY+WG G G+LGH + P + AL GI
Sbjct: 53 LDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGN---SSDLFTPLPIKALHGI 109
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
IK +ACG H A+T +G + +WG +Q GQLGLG S L+P + F I I
Sbjct: 110 RIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDS--LVPQKIQA-FEGIRI--- 163
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 403
++VA G HT DG ++GWG+ YG T P V GE + A
Sbjct: 164 ----KMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVA 219
Query: 404 GG 405
G
Sbjct: 220 CG 221
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 90/194 (46%), Gaps = 19/194 (9%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPR--RVVALDGIFI 285
K+ +S G HS A+ V +WG G GQLGH GD E P ++ ALDG I
Sbjct: 4 RKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGH-----GDAEDRPSPTQLSALDGHQI 58
Query: 286 KDVACGGVHSCALTSKGA-LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP 344
V CG H+ A + G +Y+WG G+LG G + F+ +P ++ R
Sbjct: 59 VSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIR-------- 110
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAA 403
++ +ACG SH L +G + WG N GQ + + P + G ++ +AA
Sbjct: 111 --IKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAA 168
Query: 404 GGGHSAVLADACSL 417
G H+A + + L
Sbjct: 169 GAEHTAAVTEDGDL 182
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y WG+N GQ G Q + P+ + + + ++CG HT A
Sbjct: 280 LTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPD--------DQKVVQVSCGWRHTLA 331
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQL 111
V +F WG GQLG G R P+ ++ L
Sbjct: 332 VTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEAL 366
>gi|444911351|ref|ZP_21231526.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444718109|gb|ELW58925.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 1085
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 123/392 (31%), Positives = 181/392 (46%), Gaps = 57/392 (14%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFT 85
WG N GQ G G +P Q+P S +A G H+ AV SDGT++
Sbjct: 711 WGNNAYGQLG-DGTSTLHPVPVQVP---------GPSAMKGVAAGGSHSLAVRSDGTVWA 760
Query: 86 WGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLW 145
WG N G+LGDGT R P +V+ L S ++S G + + A+ ++DGT+ W
Sbjct: 761 WGNNGSGELGDGTGLQRPRPVQVQGLGSAV--AVSAGTNHSLAV----QSDGTV-----W 809
Query: 146 VWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
WG N G+ R + + VS GS H +AL G + AWGYN YGQL
Sbjct: 810 AWGGNSQGQLGDGTGITRYVPVRVSGLNGVMAVSAGSAHSLALRSDGTVWAWGYNFYGQL 869
Query: 200 GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ 259
G + + R++ + P L + ++ G +HS AV +G V+ WG GQ
Sbjct: 870 GDATSTQ-----RLVP------IQVPGLTGVVSIAAGTHHSLAVRSDGTVWAWGYNFYGQ 918
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LG + + P +V L G+ VA G HS A+ S G ++AWG + GQLG G
Sbjct: 919 LGDGTKI---QRSPPVQVPGLAGMV--SVAAGTYHSLAVHSNGTVWAWGYNNHGQLGDGT 973
Query: 320 QTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAAN 379
T+ R +P+ + + + A + H+LV DG + GWG N+ Q +
Sbjct: 974 TTQ-------------RLLPVPISSSSGVIAAAANWHSLVVRTDGTVWGWGSNNASQLGD 1020
Query: 380 EKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
++ P+P G VR +++G HS L
Sbjct: 1021 GSTSDRKMPTPSSVPNG-VRSISSGANHSLAL 1051
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 122/363 (33%), Positives = 173/363 (47%), Gaps = 59/363 (16%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+A G H+ + SDGT++ WG N +GQLGDGT ++ P +V+ L S V +++ G +
Sbjct: 42 VAAGAAHSLMLRSDGTVWAWGDNTYGQLGDGTGITQRLPVRVQSLDS--VVALAVGYQHS 99
Query: 127 AAIAEPRENDGTISTSRLWVWGQN----------QGSNFPRLFWGAFTPNTIICQVSCGS 176
A+ +DGT+ W WG N S P W + N ++ ++ G
Sbjct: 100 LAL----RSDGTV-----WAWGDNFFGQLGDGSDAQSQVPIQVW---SLNGVVA-IAAGD 146
Query: 177 VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG 236
H +AL G + AWGYN +GQLG T P ++G L + +S G
Sbjct: 147 HHSLALLSDGSVWAWGYNAHGQLGDDTTVASPL-PVQVQG----------LSGVVALSAG 195
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSC 296
HS AV +G+V WG GQLG S + P V +L G +K V G HS
Sbjct: 196 STHSLAVLSDGKVKAWGDNYYGQLGDG---SSTERWTPVLVSSLTG--VKSVVAGTFHSL 250
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP--NGVQLVACGH 354
AL S G + AWG + +GQLG+ TR R +P+ VVP VQ +A G
Sbjct: 251 ALCSDGTVRAWGENGSGQLGISSTTR-------------RPVPV-VVPGLTNVQALAAGS 296
Query: 355 SHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLAD 413
+H+L DG + WG N +GQ N + P V VG ++ +AAGG HS A+ AD
Sbjct: 297 AHSLALRSDGTVRAWGNNDHGQVGNGTISQQLTPVQVP-GVGRMKSIAAGGAHSLAMRAD 355
Query: 414 ACS 416
+
Sbjct: 356 GIT 358
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/375 (30%), Positives = 174/375 (46%), Gaps = 56/375 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N SG+ G L+ P+ + + G + ++ G H+ AV SDGT
Sbjct: 758 VWAWGNNGSGELGDG---TGLQRPRPVQVQGLGSA-------VAVSAGTNHSLAVQSDGT 807
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG N GQLGDGT R P +V L V ++S G+ + A+ +DGT+
Sbjct: 808 VWAWGGNSQGQLGDGTGITRYVPVRVSGLNG--VMAVSAGSAHSLAL----RSDGTV--- 858
Query: 143 RLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
W WG N ++ RL T + ++ G+ H +A+ G + AWGYN Y
Sbjct: 859 --WAWGYNFYGQLGDATSTQRLVPIQVPGLTGVVSIAAGTHHSLAVRSDGTVWAWGYNFY 916
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG G + + P V + P L + V+ G YHS AV NG V+ WG +
Sbjct: 917 GQLGDGTKIQ--RSPPV---------QVPGLAGMVSVAAGTYHSLAVHSNGTVWAWGYNN 965
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
GQLG + + LLP + + G+ A HS + + G ++ WG + A QLG
Sbjct: 966 HGQLGDGTTT---QRLLPVPISSSSGVI---AAAANWHSLVVRTDGTVWGWGSNNASQLG 1019
Query: 317 LGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
G + S +P S VPNGV+ ++ G +H+L DG + WG+ + GQ
Sbjct: 1020 DG--STSDRKMPTPSS----------VPNGVRSISSGANHSLALRSDGTVWAWGFGNSGQ 1067
Query: 377 AANEKSTYAWYPSPV 391
+ + P+ V
Sbjct: 1068 LGDGVMSMRLVPAGV 1082
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 134/401 (33%), Positives = 178/401 (44%), Gaps = 62/401 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A+ +++ WGYN GQ G G P Q P L G A +A G H+ A
Sbjct: 602 VDAQGSVWAWGYNGMGQLG-DGTTTPRVTPTQ-APALSGVVA--------LAAGDSHSLA 651
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ +DG + WG N+ GQLGD T R P V L + V + AH A D
Sbjct: 652 LRADGVAWAWGGNDQGQLGDATTLERSTPAAVPGL-AHVVALAAGNAHSLVLHA-----D 705
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQ---------VSCGSVHVVALSECGL 187
GT S+ WG N + +L G T + + Q V+ G H +A+ G
Sbjct: 706 GTSSS-----WGNNA---YGQLGDGTSTLHPVPVQVPGPSAMKGVAAGGSHSLAVRSDGT 757
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWG N G+LG G GLQ PR + + L VS G HS AV +G
Sbjct: 758 VWAWGNNGSGELGDG---TGLQRPRPV--------QVQGLGSAVAVSAGTNHSLAVQSDG 806
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
V+ WG S GQLG +G +P RV L+G+ V+ G HS AL S G ++AW
Sbjct: 807 TVWAWGGNSQGQLGDG---TGITRYVPVRVSGLNGVMA--VSAGSAHSLALRSDGTVWAW 861
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G + GQ LG T + L+P + +P L GV +A G H+L DG +
Sbjct: 862 GYNFYGQ--LGDATSTQRLVPIQ-------VPGL---TGVVSIAAGTHHSLAVRSDGTVW 909
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
WGYN YGQ + P V G V +AAG HS
Sbjct: 910 AWGYNFYGQLGDGTKIQRSPPVQVPGLAGMV-SVAAGTYHS 949
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 134/412 (32%), Positives = 187/412 (45%), Gaps = 71/412 (17%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A + WG + GQ G +QLR P ++ + P G G+ H+ A+
Sbjct: 354 ADGITWAWGDDSQGQLGDGQSSQQLR-PARVLGQRIRMPLG---------TGNRHSLALH 403
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
+DGT++ WG N GQLGDGT+ R P +V L S + +H AA A DGT
Sbjct: 404 ADGTVWAWGVNTAGQLGDGTDLPRTLPVQVPGLAGVHTLSATT-SHSLAARA-----DGT 457
Query: 139 ISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQ---------VSCGSVHVVALSECGLLQ 189
+ W WG N F +L G T + Q VS H +A+S G +
Sbjct: 458 V-----WAWGDNA---FGQLGDGTTTQRLLPVQVPGLAGVDTVSSMHQHSLAVSRDGTVW 509
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
AWG+N G+LG G T L +V P L + V+ G HS A+ +G V
Sbjct: 510 AWGFNGSGRLGDGTTLSRLTPVQV-----------PGLSSMVAVAAGSTHSLALRADGTV 558
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
+ WG S G LG + + L P +V L G+ +A G +S A+ ++G+++AWG
Sbjct: 559 WAWGDNSNGALGDGTTL---RRLSPVQVPGLSGVVA--LAAGNGYSLAVDAQGSVWAWGY 613
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGW 369
+ GQLG G T + + P ++ P L +GV +A G SH+L DG W
Sbjct: 614 NGMGQLGDG--TTTPRVTPTQA-------PAL---SGVVALAAGDSHSLALRADGVAWAW 661
Query: 370 GYNSYGQAAN----EKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL-ADACS 416
G N GQ + E+ST A P + V LAAG HS VL AD S
Sbjct: 662 GGNDQGQLGDATTLERSTPAAVPG-----LAHVVALAAGNAHSLVLHADGTS 708
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 136/487 (27%), Positives = 197/487 (40%), Gaps = 123/487 (25%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A ++ WG N GQ G G Q +P Q+P AG ++ ++ H+H+ AV+
Sbjct: 454 ADGTVWAWGDNAFGQLG-DGTTTQRLLPVQVP-----GLAGVDT----VSSMHQHSLAVS 503
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DGT++ WG N G+LGDGT R P +V L S + +++ G+ + A+ DGT
Sbjct: 504 RDGTVWAWGFNGSGRLGDGTTLSRLTPVQVPGLSS--MVAVAAGSTHSLAL----RADGT 557
Query: 139 ISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
+ W WG N G+ RL + + ++ G+ + +A+ G + AWG
Sbjct: 558 V-----WAWGDNSNGALGDGTTLRRLSPVQVPGLSGVVALAAGNGYSLAVDAQGSVWAWG 612
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
YN GQLG G T PRV +AP L + ++ G+ HS A+ +G + W
Sbjct: 613 YNGMGQLGDGTTT-----PRVTP------TQAPALSGVVALAAGDSHSLALRADGVAWAW 661
Query: 253 GLGSVGQLGHCS---------------------------------------------LQS 267
G GQLG + L
Sbjct: 662 GGNDQGQLGDATTLERSTPAAVPGLAHVVALAAGNAHSLVLHADGTSSSWGNNAYGQLGD 721
Query: 268 GDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR----- 322
G L P V +K VA GG HS A+ S G ++AWG + +G+LG G +
Sbjct: 722 GTSTLHPVPVQVPGPSAMKGVAAGGSHSLAVRSDGTVWAWGNNGSGELGDGTGLQRPRPV 781
Query: 323 ---------------SFSLIPNESDTYF-----------------RNIPILVVP-NGVQL 349
+ SL T + R +P+ V NGV
Sbjct: 782 QVQGLGSAVAVSAGTNHSLAVQSDGTVWAWGGNSQGQLGDGTGITRYVPVRVSGLNGVMA 841
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS- 408
V+ G +H+L DG + WGYN YGQ + ST P V G V +AAG HS
Sbjct: 842 VSAGSAHSLALRSDGTVWAWGYNFYGQLGDATSTQRLVPIQVPGLTGVV-SIAAGTHHSL 900
Query: 409 AVLADAC 415
AV +D
Sbjct: 901 AVRSDGT 907
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 119/395 (30%), Positives = 166/395 (42%), Gaps = 56/395 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+ WG N GQ G +QL P Q+P R IA G H+ A+ +DG
Sbjct: 308 VRAWGNNDHGQVGNGTISQQL-TPVQVP---------GVGRMKSIAAGGAHSLAMRADGI 357
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ WG + GQLGDG + P +V L + G + A+ DGT+
Sbjct: 358 TWAWGDDSQGQLGDGQSSQQLRPARV--LGQRIRMPLGTGNRHSLAL----HADGTV--- 408
Query: 143 RLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
W WG N G++ PR + +S + H +A G + AWG N +
Sbjct: 409 --WAWGVNTAGQLGDGTDLPRTLPVQVPGLAGVHTLSATTSHSLAARADGTVWAWGDNAF 466
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG G T + L + P L + VS HS AVS +G V+ WG
Sbjct: 467 GQLGDGTTTQRL-----------LPVQVPGLAGVDTVSSMHQHSLAVSRDGTVWAWGFNG 515
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
G+LG + S L P +V L + VA G HS AL + G ++AWG + G LG
Sbjct: 516 SGRLGDGTTLS---RLTPVQVPGLSSMVA--VAAGSTHSLALRADGTVWAWGDNSNGALG 570
Query: 317 LGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
G R S + +P L +GV +A G+ ++L G + WGYN GQ
Sbjct: 571 DGTTLRRLSPV---------QVPGL---SGVVALAAGNGYSLAVDAQGSVWAWGYNGMGQ 618
Query: 377 AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
+ +T P+ + V LAAG HS L
Sbjct: 619 LGDGTTTPRVTPTQAP-ALSGVVALAAGDSHSLAL 652
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 118/379 (31%), Positives = 177/379 (46%), Gaps = 61/379 (16%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+++ WGYN GQ G + LP ++ G S + ++ G H+ AV SDG
Sbjct: 157 SVWAWGYNAHGQLGDD-----TTVASPLPVQVQGL-----SGVVALSAGSTHSLAVLSDG 206
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+ WG N +GQLGDG+ R P V L VKS+ G + A+ +DGT+
Sbjct: 207 KVKAWGDNYYGQLGDGSSTERWTPVLVSSLTG--VKSVVAGTFHSLALC----SDGTVR- 259
Query: 142 SRLWVWGQNQG-----SNFPRLFWGAFTPN-TIICQVSCGSVHVVALSECGLLQAWGYNE 195
WG+N S+ R P T + ++ GS H +AL G ++AWG N+
Sbjct: 260 ----AWGENGSGQLGISSTTRRPVPVVVPGLTNVQALAAGSAHSLALRSDGTVRAWGNND 315
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
+GQ+G G + L +V P + ++ ++ G HS A+ +G + WG
Sbjct: 316 HGQVGNGTISQQLTPVQV-----------PGVGRMKSIAAGGAHSLAMRADGITWAWGDD 364
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIK-DVACGGVHSCALTSKGALYAWGGSQAGQ 314
S GQLG QS ++L P RV+ G I+ + G HS AL + G ++AWG + AGQ
Sbjct: 365 SQGQLGDG--QS-SQQLRPARVL---GQRIRMPLGTGNRHSLALHADGTVWAWGVNTAGQ 418
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPN--GVQLVACGHSHTLVYMRDGRIHGWGYN 372
LG G +P R +P+ VP GV ++ SH+L DG + WG N
Sbjct: 419 LGDGTD------LP-------RTLPVQ-VPGLAGVHTLSATTSHSLAARADGTVWAWGDN 464
Query: 373 SYGQAANEKSTYAWYPSPV 391
++GQ + +T P V
Sbjct: 465 AFGQLGDGTTTQRLLPVQV 483
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 123/269 (45%), Gaps = 45/269 (16%)
Query: 3 INEIIGETARPVDNIPAKS--AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA 60
+N ++ +A ++ +S ++ WGYN GQ G ++L +P Q+P L G
Sbjct: 836 LNGVMAVSAGSAHSLALRSDGTVWAWGYNFYGQLGDATSTQRL-VPIQVP-GLTGV---- 889
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
+ IA G H+ AV SDGT++ WG N +GQLGDGT+ R P +V L + S++
Sbjct: 890 ----VSIAAGTHHSLAVRSDGTVWAWGYNFYGQLGDGTKIQRSPPVQVPGLAG--MVSVA 943
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGS---- 176
G + + A+ ++GT+ W WG N N +L G T + +S S
Sbjct: 944 AGTYHSLAV----HSNGTV-----WAWGYN---NHGQLGDGTTTQRLLPVPISSSSGVIA 991
Query: 177 ----VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
H + + G + WG N QLG G T + K + +
Sbjct: 992 AAANWHSLVVRTDGTVWGWGSNNASQLGDGSTSD-----------RKMPTPSSVPNGVRS 1040
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLG 261
+S G HS A+ +G V+ WG G+ GQLG
Sbjct: 1041 ISSGANHSLALRSDGTVWAWGFGNSGQLG 1069
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 95/184 (51%), Gaps = 21/184 (11%)
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
QV+ G HS + +G V+ WG + GQLG + G + LP RV +LD + +A G
Sbjct: 41 QVAAGAAHSLMLRSDGTVWAWGDNTYGQLGDGT---GITQRLPVRVQSLDSVVA--LAVG 95
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLV 350
HS AL S G ++AWG + GQLG G +S +PI V NGV +
Sbjct: 96 YQHSLALRSDGTVWAWGDNFFGQLGDGSDAQS-------------QVPIQVWSLNGVVAI 142
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-A 409
A G H+L + DG + WGYN++GQ ++ + + P V G V L+AG HS A
Sbjct: 143 AAGDHHSLALLSDGSVWAWGYNAHGQLGDDTTVASPLPVQVQGLSGVV-ALSAGSTHSLA 201
Query: 410 VLAD 413
VL+D
Sbjct: 202 VLSD 205
>gi|383280368|pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
Resistance Locus 8)
gi|383280369|pdb|4D9S|B Chain B, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
Resistance Locus 8)
Length = 406
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/323 (33%), Positives = 164/323 (50%), Gaps = 44/323 (13%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
L I+ G H+ A+ S + +WG E GQLG G E R P ++ L + S++CGA
Sbjct: 19 LIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGAD 78
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVS 173
T A ++ S ++ WG +F RL G FTP I I Q++
Sbjct: 79 HTVAYSQ--------SGMEVYSWGWG---DFGRLGHGNSSDLFTPLPIKALHGIRIKQIA 127
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
CG H +A++ G +Q+WG N+ GQLG G T + L P+ I+ + E +I V
Sbjct: 128 CGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV-PQKIQAF--------EGIRIKMV 178
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
+ G H+AAV+E+G++Y WG G G LG L L+P RV + G + VACG
Sbjct: 179 AAGAEHTAAVTEDGDLYGWGWGRYGNLG---LGDRTDRLVPERVTSTGGEKMSMVACGWR 235
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG 353
H+ +++ GALY +G S+ GQLG G LIP++ + + + ++ G
Sbjct: 236 HTISVSYSGALYTYGWSKYGQLGHGDLED--HLIPHKLEALSNSF--------ISQISGG 285
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQ 376
HT+ DG+++GWG+N +GQ
Sbjct: 286 WRHTMALTSDGKLYGWGWNKFGQ 308
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 172/383 (44%), Gaps = 62/383 (16%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT-LF 84
WG GQ G E + P QL A + + + CG +HT A + G ++
Sbjct: 40 WGRGEDGQLGHGDAEDRPS-PTQLS-------ALDGHQIVSVTCGADHTVAYSQSGMEVY 91
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGTISTSR 143
+WG +FG+LG G P +K L +K I+CG +HC A E G + +
Sbjct: 92 SWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTME-----GEVQS-- 144
Query: 144 LWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAWG 192
WG+NQ +L G + P I I V+ G+ H A++E G L WG
Sbjct: 145 ---WGRNQNG---QLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWG 198
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
+ YG LG G + L RV EK++ V+CG H+ +VS +G +YT+
Sbjct: 199 WGRYGNLGLGDRTDRLVPERVTSTGG---------EKMSMVACGWRHTISVSYSGALYTY 249
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G GQLGH L+ L+P ++ AL FI ++ G H+ ALTS G LY WG ++
Sbjct: 250 GWSKYGQLGHGDLE---DHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKF 306
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQLV--ACGHSHTLVYMRDGRIHGW 369
GQ+G+G S P+ V P+ ++V +CG HTL + W
Sbjct: 307 GQVGVGNNLDQCS-------------PVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAW 353
Query: 370 GYNSYGQAANEKSTYAWYPSPVD 392
G + GQ +S +P ++
Sbjct: 354 GRGTNGQLGIGESVDRNFPKIIE 376
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 150/313 (47%), Gaps = 36/313 (11%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPE-LFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG+ G+ G G L P LP + L G R IACG H AV +G
Sbjct: 90 VYSWGWGDFGRLGH-GNSSDLFTP--LPIKALHGI------RIKQIACGDSHCLAVTMEG 140
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+ +WG N+ GQLG G E P+K++ + +K ++ GA TAA+ E DG +
Sbjct: 141 EVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE----DGDLYG 196
Query: 142 SRLWVWGQ----NQGSNFPRLFWGAFTPN--TIICQVSCGSVHVVALSECGLLQAWGYNE 195
W WG+ G RL T + V+CG H +++S G L +G+++
Sbjct: 197 ---WGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSK 253
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
YGQLG G + L ++ EA I+Q+S G H+ A++ +G++Y WG
Sbjct: 254 YGQLGHGDLEDHLIPHKL---------EALSNSFISQISGGWRHTMALTSDGKLYGWGWN 304
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
GQ+G + + + P +V D + V+CG H+ A+T + ++AWG GQL
Sbjct: 305 KFGQVG---VGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQL 361
Query: 316 GLGPQT-RSFSLI 327
G+G R+F I
Sbjct: 362 GIGESVDRNFPKI 374
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 115/242 (47%), Gaps = 23/242 (9%)
Query: 165 PNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
P + +S G+ H VAL ++ +WG E GQLG G E P + A
Sbjct: 14 PPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLS--------A 64
Query: 225 PELEKITQVSCGEYHSAAVSENG-EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
+ +I V+CG H+ A S++G EVY+WG G G+LGH + P + AL GI
Sbjct: 65 LDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGN---SSDLFTPLPIKALHGI 121
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
IK +ACG H A+T +G + +WG +Q GQLGLG S L+P + F I I
Sbjct: 122 RIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDS--LVPQKIQA-FEGIRI--- 175
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 403
++VA G HT DG ++GWG+ YG T P V GE + A
Sbjct: 176 ----KMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVA 231
Query: 404 GG 405
G
Sbjct: 232 CG 233
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 90/193 (46%), Gaps = 19/193 (9%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPR--RVVALDGIFIK 286
K+ +S G HS A+ V +WG G GQLGH GD E P ++ ALDG I
Sbjct: 17 KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGH-----GDAEDRPSPTQLSALDGHQIV 71
Query: 287 DVACGGVHSCALTSKGA-LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
V CG H+ A + G +Y+WG G+LG G + F+ +P ++ R
Sbjct: 72 SVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIR--------- 122
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAG 404
++ +ACG SH L +G + WG N GQ + + P + G ++ +AAG
Sbjct: 123 -IKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAG 181
Query: 405 GGHSAVLADACSL 417
H+A + + L
Sbjct: 182 AEHTAAVTEDGDL 194
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 12/124 (9%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y WG+N GQ G Q + P+ + + + ++CG HT A
Sbjct: 292 LTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPD--------DQKVVQVSCGWRHTLA 343
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V +F WG GQLG G R P+ ++ L + + G H ++ +P
Sbjct: 344 VTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVDG----ASGQHIESSNIDPSSGK 399
Query: 137 GTIS 140
+S
Sbjct: 400 SWVS 403
>gi|219847608|ref|YP_002462041.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
9485]
gi|219541867|gb|ACL23605.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
DSM 9485]
Length = 778
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 122/408 (29%), Positives = 178/408 (43%), Gaps = 56/408 (13%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + WG N+SGQ G L + P + G P+G + IA G +HT A
Sbjct: 119 LTGSGGVRCWGANYSGQLGNG-----LTFGRSTPGAVSGLPSGVTA----IAAGGDHTCA 169
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ S G + WG N +GQLGDGT R+ P V L S V +I+ G T A+ E
Sbjct: 170 LMSSGGVMCWGDNYYGQLGDGTTTNRRTPVAVSGLPSG-VTAIAAGGLHTCALTGSGE-- 226
Query: 137 GTISTSRLWVWGQNQGSNF--PRLFWGAFTPNTI------ICQVSCGSVHVVALSECGLL 188
+W WG N + TP + + ++ G +H AL G +
Sbjct: 227 -------VWCWGYNYYGQLGDGTTTYSRSTPAAVGGLPSGMTAIAAGGLHTCALMSSGGV 279
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG N+ GQLG G + P + G +T ++ G+YH+ A++ +GE
Sbjct: 280 WCWGRNDSGQLGDGSDTDSST-PVAVSGLP---------SGVTAIAAGDYHTCALTGSGE 329
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
V+ WG GQLG + + P V L ++ +A G H+CAL S G ++ WG
Sbjct: 330 VWCWGGNGFGQLGDGTTTA---RSTPAAVSGLP-SGVETIAAGDYHTCALMSSGGVWCWG 385
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGRI 366
+ +GQLG G T R+ P V +P+GV +A G HT M G +
Sbjct: 386 RNNSGQLGDGTTTA-------------RSTPAAVSGLPSGVTAIAAGGLHTCALMSSGGV 432
Query: 367 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADA 414
WG N+ GQ + T + P V V +AAGG H+ L +
Sbjct: 433 WCWGLNNSGQLGDGSDTDSSTPVAVSGLASGVETIAAGGWHTCALTSS 480
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 123/406 (30%), Positives = 177/406 (43%), Gaps = 64/406 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WGYN+ GQ G + + P + G P+G + IA G HT A+ S G
Sbjct: 227 VWCWGYNYYGQLG----DGTTTYSRSTPAAVGGLPSGMTA----IAAGGLHTCALMSSGG 278
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG N+ GQLGDG++ P V L S V +I+ G + T A+ E
Sbjct: 279 VWCWGRNDSGQLGDGSDTDSSTPVAVSGLPSG-VTAIAAGDYHTCALTGSGE-------- 329
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVS----------CGSVHVVALSECGLLQAWG 192
+W WG N F +L G T + VS G H AL G + WG
Sbjct: 330 -VWCWGGN---GFGQLGDGTTTARSTPAAVSGLPSGVETIAAGDYHTCALMSSGGVWCWG 385
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
N GQLG G T P + G +T ++ G H+ A+ +G V+ W
Sbjct: 386 RNNSGQLGDGTTTA-RSTPAAVSGLP---------SGVTAIAAGGLHTCALMSSGGVWCW 435
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIF--IKDVACGGVHSCALTSKGALYAWGGS 310
GL + GQLG S + VA+ G+ ++ +A GG H+CALTS G ++ WG +
Sbjct: 436 GLNNSGQLGDGS------DTDSSTPVAVSGLASGVETIAAGGWHTCALTSSGGVWCWGRN 489
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGRIHG 368
+GQLG + T + P+ V +P+GV +A G HT G +
Sbjct: 490 NSGQLG-------------DGSTIYHITPVAVSGLPSGVTAIAAGDYHTCALTGSGGVWC 536
Query: 369 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADA 414
WGYN GQ + +T P V V +AAG H+ L +
Sbjct: 537 WGYNLSGQLGDGTTTDRSTPVAVSGLTSGVTVIAAGRFHTCALTSS 582
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 125/410 (30%), Positives = 182/410 (44%), Gaps = 67/410 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + ++ WG N+SGQ G + P + G P+G + IA G HT A
Sbjct: 375 LMSSGGVWCWGRNNSGQLGDG-----TTTARSTPAAVSGLPSGVTA----IAAGGLHTCA 425
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ S G ++ WG N GQLGDG++ P V L S V++I+ G T A+
Sbjct: 426 LMSSGGVWCWGLNNSGQLGDGSDTDSSTPVAVSGLASG-VETIAAGGWHTCAL------- 477
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGA----FTPNTI------ICQVSCGSVHVVALSECG 186
S+ +W WG+N N +L G+ TP + + ++ G H AL+ G
Sbjct: 478 --TSSGGVWCWGRN---NSGQLGDGSTIYHITPVAVSGLPSGVTAIAAGDYHTCALTGSG 532
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ WGYN GQLG G T + P + G +T ++ G +H+ A++ +
Sbjct: 533 GVWCWGYNLSGQLGDGTTTD-RSTPVAVSGLT---------SGVTVIAAGRFHTCALTSS 582
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGI--FIKDVACGGVHSCALTSKGA 303
G V+ WG GQLG D R VA+ G+ + +A GG H+CALTS G
Sbjct: 583 GGVWCWGANFDGQLG-------DGTTTNRTTPVAVSGLPSGVTAIAAGGWHTCALTSSGE 635
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYM 361
++ WG + GQLG G T R+ P V +P+GV +A G HT
Sbjct: 636 VWCWGDNYYGQLGDGTTTN-------------RSTPGAVSGLPSGVTAIAAGWEHTCALT 682
Query: 362 RDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
G + WG N YGQ + +T P V V +AAG H+ L
Sbjct: 683 SSGEVWCWGDNYYGQLGDGTTTNRSTPGAVSGLPSGVTAIAAGVYHTCAL 732
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 126/407 (30%), Positives = 176/407 (43%), Gaps = 67/407 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G + P + G P+G + IA G HT A+ S G
Sbjct: 330 VWCWGGNGFGQLGDG-----TTTARSTPAAVSGLPSGVET----IAAGDYHTCALMSSGG 380
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG N GQLGDGT R P V L S V +I+ G T A+ +S+
Sbjct: 381 VWCWGRNNSGQLGDGTTTARSTPAAVSGLPSG-VTAIAAGGLHTCAL---------MSSG 430
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVS----------CGSVHVVALSECGLLQAWG 192
+W WG N N +L G+ T ++ VS G H AL+ G + WG
Sbjct: 431 GVWCWGLN---NSGQLGDGSDTDSSTPVAVSGLASGVETIAAGGWHTCALTSSGGVWCWG 487
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
N GQLG G T + P + G +T ++ G+YH+ A++ +G V+ W
Sbjct: 488 RNNSGQLGDGSTIYHIT-PVAVSGLP---------SGVTAIAAGDYHTCALTGSGGVWCW 537
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRV-VALDGIF--IKDVACGGVHSCALTSKGALYAWGG 309
G GQLG D R VA+ G+ + +A G H+CALTS G ++ WG
Sbjct: 538 GYNLSGQLG-------DGTTTDRSTPVAVSGLTSGVTVIAAGRFHTCALTSSGGVWCWGA 590
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGRIH 367
+ GQLG G T R P+ V +P+GV +A G HT G +
Sbjct: 591 NFDGQLGDGTTTN-------------RTTPVAVSGLPSGVTAIAAGGWHTCALTSSGEVW 637
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADA 414
WG N YGQ + +T P V V +AAG H+ L +
Sbjct: 638 CWGDNYYGQLGDGTTTNRSTPGAVSGLPSGVTAIAAGWEHTCALTSS 684
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 123/411 (29%), Positives = 176/411 (42%), Gaps = 68/411 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + WG N GQ G + P + G P+G + IA G+ HT A
Sbjct: 68 LTGSGGVMCWGGNDFGQLGDG-----TPTTRSTPGAVSGLPSGVTA----IAAGNYHTCA 118
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ G + WGAN GQLG+G GR P V L S V +I+ G T A+
Sbjct: 119 LTGSGGVRCWGANYSGQLGNGLTFGRSTPGAVSGLPSG-VTAIAAGGDHTCAL------- 170
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTI------ICQVSCGSVHVVALSE 184
+S+ + WG N G+ R TP + + ++ G +H AL+
Sbjct: 171 --MSSGGVMCWGDNYYGQLGDGTTTNRR-----TPVAVSGLPSGVTAIAAGGLHTCALTG 223
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G + WGYN YGQLG G T P + G +T ++ G H+ A+
Sbjct: 224 SGEVWCWGYNYYGQLGDGTTTYSRSTPAAVGGLP---------SGMTAIAAGGLHTCALM 274
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI--FIKDVACGGVHSCALTSKG 302
+G V+ WG GQLG S + VA+ G+ + +A G H+CALT G
Sbjct: 275 SSGGVWCWGRNDSGQLGDGS------DTDSSTPVAVSGLPSGVTAIAAGDYHTCALTGSG 328
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVY 360
++ WGG+ GQLG G T R+ P V +P+GV+ +A G HT
Sbjct: 329 EVWCWGGNGFGQLGDGTTTA-------------RSTPAAVSGLPSGVETIAAGDYHTCAL 375
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
M G + WG N+ GQ + +T P+ V V +AAGG H+ L
Sbjct: 376 MSSGGVWCWGRNNSGQLGDGTTTARSTPAAVSGLPSGVTAIAAGGLHTCAL 426
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 157/356 (44%), Gaps = 49/356 (13%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
IA G HT A+ G + WG N+FGQLGDGT R P V L S V +I+ G + T
Sbjct: 58 IAAGGAHTCALTGSGGVMCWGGNDFGQLGDGTPTTRSTPGAVSGLPSG-VTAIAAGNYHT 116
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI------ICQVSCGSVHV 179
A+ + + WG N L +G TP + + ++ G H
Sbjct: 117 CAL---------TGSGGVRCWGANYSGQLGNGLTFGRSTPGAVSGLPSGVTAIAAGGDHT 167
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
AL G + WG N YGQLG G T + P + G +T ++ G H
Sbjct: 168 CALMSSGGVMCWGDNYYGQLGDGTTTN-RRTPVAVSGLP---------SGVTAIAAGGLH 217
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI--FIKDVACGGVHSCA 297
+ A++ +GEV+ WG GQLG G A+ G+ + +A GG+H+CA
Sbjct: 218 TCALTGSGEVWCWGYNYYGQLGD-----GTTTYSRSTPAAVGGLPSGMTAIAAGGLHTCA 272
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLVACGHS 355
L S G ++ WG + +GQLG G T S + P+ V +P+GV +A G
Sbjct: 273 LMSSGGVWCWGRNDSGQLGDGSDTDS-------------STPVAVSGLPSGVTAIAAGDY 319
Query: 356 HTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
HT G + WG N +GQ + +T P+ V V +AAG H+ L
Sbjct: 320 HTCALTGSGEVWCWGGNGFGQLGDGTTTARSTPAAVSGLPSGVETIAAGDYHTCAL 375
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 147/343 (42%), Gaps = 59/343 (17%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + ++ WG N+SGQ G + P + G P+G + IA G HT A
Sbjct: 477 LTSSGGVWCWGRNNSGQLGDGSTIYHIT-----PVAVSGLPSGVTA----IAAGDYHTCA 527
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ G ++ WG N GQLGDGT R P V L S V I+ G T A+
Sbjct: 528 LTGSGGVWCWGYNLSGQLGDGTTTDRSTPVAVSGLTSG-VTVIAAGRFHTCAL------- 579
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTI------ICQVSCGSVHVVALSE 184
S+ +W WG N G+ R TP + + ++ G H AL+
Sbjct: 580 --TSSGGVWCWGANFDGQLGDGTTTNRT-----TPVAVSGLPSGVTAIAAGGWHTCALTS 632
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G + WG N YGQLG G T R G L +T ++ G H+ A++
Sbjct: 633 SGEVWCWGDNYYGQLGDGTTTN-----RSTPGAVSGLPSG-----VTAIAAGWEHTCALT 682
Query: 245 ENGEVYTWGLGSVGQLGHCSLQS----GDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
+GEV+ WG GQLG + + G LP V A +A G H+CALT
Sbjct: 683 SSGEVWCWGDNYYGQLGDGTTTNRSTPGAVSGLPSGVTA--------IAAGVYHTCALTG 734
Query: 301 KGALYAWGGSQAGQLGLG-PQTRSFSLIPNESDTYFRNIPILV 342
G + WG + GQLG G P R+ + S ++ +P+++
Sbjct: 735 SGGVMCWGNNGDGQLGDGRPLYRTTPVDVVTSASWGVYLPMII 777
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 118/258 (45%), Gaps = 30/258 (11%)
Query: 157 RLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKG 216
RL +F+P + ++ G H AL+ G + WG N++GQLG +G R G
Sbjct: 43 RLHTSSFSPLQGVTAIAAGGAHTCALTGSGGVMCWGGNDFGQLG-----DGTPTTRSTPG 97
Query: 217 YAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRR 276
L +T ++ G YH+ A++ +G V WG GQLG+ L G P
Sbjct: 98 AVSGLPSG-----VTAIAAGNYHTCALTGSGGVRCWGANYSGQLGN-GLTFGRST--PGA 149
Query: 277 VVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFR 336
V L + +A GG H+CAL S G + WG + GQLG G T R
Sbjct: 150 VSGLP-SGVTAIAAGGDHTCALMSSGGVMCWGDNYYGQLGDGTTTN-------------R 195
Query: 337 NIPILV--VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYA-WYPSPVDW 393
P+ V +P+GV +A G HT G + WGYN YGQ + +TY+ P+ V
Sbjct: 196 RTPVAVSGLPSGVTAIAAGGLHTCALTGSGEVWCWGYNYYGQLGDGTTTYSRSTPAAVGG 255
Query: 394 CVGEVRKLAAGGGHSAVL 411
+ +AAGG H+ L
Sbjct: 256 LPSGMTAIAAGGLHTCAL 273
>gi|5478530|gb|AAD43920.1|AF130441_1 UVB-resistance protein UVR8 [Arabidopsis thaliana]
Length = 440
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 108/323 (33%), Positives = 163/323 (50%), Gaps = 44/323 (13%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
L I+ G H+ A+ S + +WG E GQLG G E R P ++ L + S++CGA
Sbjct: 18 LIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGAD 77
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVS 173
T A ++ S ++ WG +F RL G FTP I I Q++
Sbjct: 78 HTVAYSQ--------SGMEVYSWGWG---DFGRLGHGNSSDLFTPLPIKALHGIRIKQIA 126
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
CG H +A++ G +Q+WG N+ GQLG G T + L P+ I+ + E I V
Sbjct: 127 CGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV-PQKIQAF--------EGIPIKMV 177
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
+ G H+AAV+E+G++Y WG G G LG L L+P RV + G + VACG
Sbjct: 178 AAGAEHTAAVTEDGDLYGWGWGRYGNLG---LGDRTDRLVPERVTSTGGEKMSMVACGWR 234
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG 353
H+ +++ GALY +G S+ GQLG G LIP++ + + + ++ G
Sbjct: 235 HTISVSYSGALYTYGWSKYGQLGHGDLED--HLIPHKLEALSNSF--------ISQISGG 284
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQ 376
HT+ DG+++GWG+N +GQ
Sbjct: 285 WRHTMALTSDGKLYGWGWNKFGQ 307
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 172/383 (44%), Gaps = 62/383 (16%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT-LF 84
WG GQ G E + P QL A + + + CG +HT A + G ++
Sbjct: 39 WGRGEDGQLGHGDAEDRPS-PTQLS-------ALDGHQIVSVTCGADHTVAYSQSGMEVY 90
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGTISTSR 143
+WG +FG+LG G P +K L +K I+CG +HC A E G + +
Sbjct: 91 SWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTME-----GEVQS-- 143
Query: 144 LWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAWG 192
WG+NQ +L G + P I I V+ G+ H A++E G L WG
Sbjct: 144 ---WGRNQNG---QLGLGDTEDSLVPQKIQAFEGIPIKMVAAGAEHTAAVTEDGDLYGWG 197
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
+ YG LG G + L RV EK++ V+CG H+ +VS +G +YT+
Sbjct: 198 WGRYGNLGLGDRTDRLVPERVTSTGG---------EKMSMVACGWRHTISVSYSGALYTY 248
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G GQLGH L+ L+P ++ AL FI ++ G H+ ALTS G LY WG ++
Sbjct: 249 GWSKYGQLGHGDLE---DHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKF 305
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQLV--ACGHSHTLVYMRDGRIHGW 369
GQ+G+G S P+ V P+ ++V +CG HTL + W
Sbjct: 306 GQVGVGNNLDQCS-------------PVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAW 352
Query: 370 GYNSYGQAANEKSTYAWYPSPVD 392
G + GQ +S +P ++
Sbjct: 353 GRGTNGQLGIGESVDRNFPKIIE 375
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 150/313 (47%), Gaps = 36/313 (11%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPE-LFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG+ G+ G G L P LP + L G R IACG H AV +G
Sbjct: 89 VYSWGWGDFGRLGH-GNSSDLFTP--LPIKALHGI------RIKQIACGDSHCLAVTMEG 139
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+ +WG N+ GQLG G E P+K++ + +K ++ GA TAA+ E DG +
Sbjct: 140 EVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIPIKMVAAGAEHTAAVTE----DGDLYG 195
Query: 142 SRLWVWGQ----NQGSNFPRLFWGAFTPN--TIICQVSCGSVHVVALSECGLLQAWGYNE 195
W WG+ G RL T + V+CG H +++S G L +G+++
Sbjct: 196 ---WGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSK 252
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
YGQLG G + L ++ EA I+Q+S G H+ A++ +G++Y WG
Sbjct: 253 YGQLGHGDLEDHLIPHKL---------EALSNSFISQISGGWRHTMALTSDGKLYGWGWN 303
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
GQ+G + + + P +V D + V+CG H+ A+T + ++AWG GQL
Sbjct: 304 KFGQVG---VGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQL 360
Query: 316 GLGPQT-RSFSLI 327
G+G R+F I
Sbjct: 361 GIGESVDRNFPKI 373
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/242 (35%), Positives = 116/242 (47%), Gaps = 23/242 (9%)
Query: 165 PNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
P + +S G+ H VAL ++ +WG E GQLG G E P + A
Sbjct: 13 PPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLS--------A 63
Query: 225 PELEKITQVSCGEYHSAAVSENG-EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
+ +I V+CG H+ A S++G EVY+WG G G+LGH + P + AL GI
Sbjct: 64 LDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGN---SSDLFTPLPIKALHGI 120
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
IK +ACG H A+T +G + +WG +Q GQLGLG S L+P + F IPI
Sbjct: 121 RIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDS--LVPQKIQA-FEGIPI--- 174
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 403
++VA G HT DG ++GWG+ YG T P V GE + A
Sbjct: 175 ----KMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVA 230
Query: 404 GG 405
G
Sbjct: 231 CG 232
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 90/193 (46%), Gaps = 19/193 (9%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPR--RVVALDGIFIK 286
K+ +S G HS A+ V +WG G GQLGH GD E P ++ ALDG I
Sbjct: 16 KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGH-----GDAEDRPSPTQLSALDGHQIV 70
Query: 287 DVACGGVHSCALTSKGA-LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
V CG H+ A + G +Y+WG G+LG G + F+ +P ++ R
Sbjct: 71 SVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIR--------- 121
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAG 404
++ +ACG SH L +G + WG N GQ + + P + G ++ +AAG
Sbjct: 122 -IKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIPIKMVAAG 180
Query: 405 GGHSAVLADACSL 417
H+A + + L
Sbjct: 181 AEHTAAVTEDGDL 193
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 12/124 (9%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y WG+N GQ G Q + P+ + + + ++CG HT A
Sbjct: 291 LTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPD--------DQKVVQVSCGWRHTLA 342
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V +F WG GQLG G R P+ ++ L + + G H ++ +P
Sbjct: 343 VTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVDG----ASGQHIESSNIDPSSGK 398
Query: 137 GTIS 140
+S
Sbjct: 399 SWVS 402
>gi|379318635|pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8
gi|379318636|pdb|4DNW|B Chain B, Crystal Structure Of Uvb-Resistance Protein Uvr8
Length = 374
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 108/324 (33%), Positives = 164/324 (50%), Gaps = 44/324 (13%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
L I+ G H+ A+ S + +WG E GQLG G E R P ++ L + S++CGA
Sbjct: 7 LIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGAD 66
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVS 173
T A ++ S ++ WG +F RL G FTP I I Q++
Sbjct: 67 HTVAYSQ--------SGMEVYSWGWG---DFGRLGHGNSSDLFTPLPIKALHGIRIKQIA 115
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
CG H +A++ G +Q+WG N+ GQLG G T + L P+ I+ + E +I V
Sbjct: 116 CGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV-PQKIQAF--------EGIRIKMV 166
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
+ G H+AAV+E+G++Y WG G G LG L L+P RV + G + VACG
Sbjct: 167 AAGAEHTAAVTEDGDLYGWGWGRYGNLG---LGDRTDRLVPERVTSTGGEKMSMVACGWR 223
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG 353
H+ +++ GALY +G S+ GQLG G LIP++ + + + ++ G
Sbjct: 224 HTISVSYSGALYTYGWSKYGQLGHGDLED--HLIPHKLEALSNSF--------ISQISGG 273
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQA 377
HT+ DG+++GWG+N +GQ
Sbjct: 274 WRHTMALTSDGKLYGWGWNKFGQV 297
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 173/383 (45%), Gaps = 62/383 (16%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT-LF 84
WG GQ G E + P QL A + + + CG +HT A + G ++
Sbjct: 28 WGRGEDGQLGHGDAEDRPS-PTQLS-------ALDGHQIVSVTCGADHTVAYSQSGMEVY 79
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGTISTSR 143
+WG +FG+LG G P +K L +K I+CG +HC A E G + +
Sbjct: 80 SWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTME-----GEVQS-- 132
Query: 144 LWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAWG 192
WG+NQ +L G + P I I V+ G+ H A++E G L WG
Sbjct: 133 ---WGRNQNG---QLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWG 186
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
+ YG LG G + L RV + EK++ V+CG H+ +VS +G +YT+
Sbjct: 187 WGRYGNLGLGDRTDRLVPERVT---------STGGEKMSMVACGWRHTISVSYSGALYTY 237
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G GQLGH L+ L+P ++ AL FI ++ G H+ ALTS G LY WG ++
Sbjct: 238 GWSKYGQLGHGDLE---DHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKF 294
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQLV--ACGHSHTLVYMRDGRIHGW 369
GQ+G+G S P+ V P+ ++V +CG HTL + W
Sbjct: 295 GQVGVGNNLDQCS-------------PVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAW 341
Query: 370 GYNSYGQAANEKSTYAWYPSPVD 392
G + GQ +S +P ++
Sbjct: 342 GRGTNGQLGIGESVDRNFPKIIE 364
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 148/312 (47%), Gaps = 34/312 (10%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG+ G+ G G L P LP + R IACG H AV +G
Sbjct: 78 VYSWGWGDFGRLGH-GNSSDLFTP--LPIKAL-----HGIRIKQIACGDSHCLAVTMEGE 129
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ +WG N+ GQLG G E P+K++ + +K ++ GA TAA+ E DG +
Sbjct: 130 VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE----DGDLYG- 184
Query: 143 RLWVWGQ----NQGSNFPRLFWGAFTPN--TIICQVSCGSVHVVALSECGLLQAWGYNEY 196
W WG+ G RL T + V+CG H +++S G L +G+++Y
Sbjct: 185 --WGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKY 242
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG G + L ++ EA I+Q+S G H+ A++ +G++Y WG
Sbjct: 243 GQLGHGDLEDHLIPHKL---------EALSNSFISQISGGWRHTMALTSDGKLYGWGWNK 293
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
GQ+G + + + P +V D + V+CG H+ A+T + ++AWG GQLG
Sbjct: 294 FGQVG---VGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG 350
Query: 317 LGPQT-RSFSLI 327
+G R+F I
Sbjct: 351 IGESVDRNFPKI 362
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 115/242 (47%), Gaps = 23/242 (9%)
Query: 165 PNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
P + +S G+ H VAL ++ +WG E GQLG G E P + A
Sbjct: 2 PPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLS--------A 52
Query: 225 PELEKITQVSCGEYHSAAVSENG-EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
+ +I V+CG H+ A S++G EVY+WG G G+LGH + P + AL GI
Sbjct: 53 LDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGN---SSDLFTPLPIKALHGI 109
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
IK +ACG H A+T +G + +WG +Q GQLGLG S L+P + F I I
Sbjct: 110 RIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDS--LVPQKIQA-FEGIRI--- 163
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 403
++VA G HT DG ++GWG+ YG T P V GE + A
Sbjct: 164 ----KMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVA 219
Query: 404 GG 405
G
Sbjct: 220 CG 221
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 90/194 (46%), Gaps = 19/194 (9%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPR--RVVALDGIFI 285
K+ +S G HS A+ V +WG G GQLGH GD E P ++ ALDG I
Sbjct: 4 RKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGH-----GDAEDRPSPTQLSALDGHQI 58
Query: 286 KDVACGGVHSCALTSKGA-LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP 344
V CG H+ A + G +Y+WG G+LG G + F+ +P ++ R
Sbjct: 59 VSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIR-------- 110
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAA 403
++ +ACG SH L +G + WG N GQ + + P + G ++ +AA
Sbjct: 111 --IKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAA 168
Query: 404 GGGHSAVLADACSL 417
G H+A + + L
Sbjct: 169 GAEHTAAVTEDGDL 182
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y WG+N GQ G Q + P+ + + + ++CG HT A
Sbjct: 280 LTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPD--------DQKVVQVSCGWRHTLA 331
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQL 111
V +F WG GQLG G R P+ ++ L
Sbjct: 332 VTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEAL 366
>gi|307110133|gb|EFN58370.1| hypothetical protein CHLNCDRAFT_20698, partial [Chlorella
variabilis]
Length = 379
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 170/363 (46%), Gaps = 55/363 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGH-EHTAAVASDG 81
++ WG N GQ G + +R P G ++ ++ G +T A+ +DG
Sbjct: 1 VFAWGVNEDGQLGLERVQR---------PAAVGADNVIVAKVVEACLGDSRNTLAIGADG 51
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+ TWG N G LG G E + P++V LQ +K + G A+ + T
Sbjct: 52 NVITWGWNARGTLGHGHREPQGKPQRVAGLQGVHIKQAAIGGWHVLALDD---------T 102
Query: 142 SRLWVWGQNQ-GSNFPRLFWGAFTP-----NTIICQVSCGSVHVVALSECGLLQAWGYNE 195
+ W WG N+ G PR P + QV+ G +H +AL+E G + WG
Sbjct: 103 GQCWAWGGNEYGQCLPRDKRDILAPVKCLEGIAVKQVAAGGMHSLALTETGEIWMWG-EP 161
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
+G I + PR I F+D VSCG +H+ A++ GE +TWG+
Sbjct: 162 WGDFSMTIN----RAPRRIDTTGDFVD----------VSCGAFHNLALNAAGECFTWGIN 207
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
G LG+ + P +VV L+G+FI DV+ GG HS A++++G +Y WG + G+L
Sbjct: 208 DFGMLGNGTTS---YATCPEKVVGLEGVFIADVSAGGWHSMAISAEGEVYVWGRGEYGRL 264
Query: 316 GLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLVYMRDGRIHGWGYNS 373
GLG +T S L P + T G ++V +CG +HT+V +GR WG +
Sbjct: 265 GLGDRTGSSKLRPQKVKTL----------EGHRVVEGSCGGTHTMVVTDEGRCFIWGRGA 314
Query: 374 YGQ 376
+G+
Sbjct: 315 FGR 317
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 145/330 (43%), Gaps = 53/330 (16%)
Query: 11 ARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACG 70
+R I A + WG+N G G RE P+ P + G G + + A G
Sbjct: 41 SRNTLAIGADGNVITWGWNARGTLGHGHRE-----PQGKPQRVAGLQ-GVHIK--QAAIG 92
Query: 71 HEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIA 130
H A+ G + WG NE+GQ + R VK L+ VK ++ G + A+
Sbjct: 93 GWHVLALDDTGQCWAWGGNEYGQCL--PRDKRDILAPVKCLEGIAVKQVAAGGMHSLALT 150
Query: 131 EPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT------PNTI-----ICQVSCGSVHV 179
E T +W+WG+ WG F+ P I VSCG+ H
Sbjct: 151 E---------TGEIWMWGEP---------WGDFSMTINRAPRRIDTTGDFVDVSCGAFHN 192
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK--ITQVSCGE 237
+AL+ G WG N++G LG G T YA ++ LE I VS G
Sbjct: 193 LALNAAGECFTWGINDFGMLGNGTTS-----------YATCPEKVVGLEGVFIADVSAGG 241
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
+HS A+S GEVY WG G G+LG ++G +L P++V L+G + + +CGG H+
Sbjct: 242 WHSMAISAEGEVYVWGRGEYGRLG-LGDRTGSSKLRPQKVKTLEGHRVVEGSCGGTHTMV 300
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLI 327
+T +G + WG G+ G S SLI
Sbjct: 301 VTDEGRCFIWGRGAFGRCVGGYARISSSLI 330
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 107/252 (42%), Gaps = 35/252 (13%)
Query: 166 NTIICQV--SC--GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFL 221
N I+ +V +C S + +A+ G + WG+N G LG G E P+ + G
Sbjct: 27 NVIVAKVVEACLGDSRNTLAIGADGNVITWGWNARGTLGHGHR-EPQGKPQRVAGLQGV- 84
Query: 222 DEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD 281
I Q + G +H A+ + G+ + WG GQ C + L P V L+
Sbjct: 85 -------HIKQAAIGGWHVLALDDTGQCWAWGGNEYGQ---CLPRDKRDILAP--VKCLE 132
Query: 282 GIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL 341
GI +K VA GG+HS ALT G ++ WG G + + + P DT +
Sbjct: 133 GIAVKQVAAGGMHSLALTETGEIWMWGEP------WGDFSMTINRAPRRIDTTGDFVD-- 184
Query: 342 VVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRK 400
V+CG H L G WG N +G N ++YA P V G +
Sbjct: 185 --------VSCGAFHNLALNAAGECFTWGINDFGMLGNGTTSYATCPEKVVGLEGVFIAD 236
Query: 401 LAAGGGHSAVLA 412
++AGG HS ++
Sbjct: 237 VSAGGWHSMAIS 248
>gi|118345495|ref|XP_976578.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila]
gi|89287995|gb|EAR85983.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila SB210]
Length = 722
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 179/389 (46%), Gaps = 58/389 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRK---GRERQLRIPKQLPPELFGCPAG----ANSRWLDIAC 69
I +Y WG N GRK E +I + PE P +N + +I+
Sbjct: 43 IDTNFEVYAWGCN----LGRKLGLSDEYYNQIFQADIPEQIKIPVKVTELSNKKINNIST 98
Query: 70 GHEHTAAVASD-GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF-----VKSISCGA 123
G H+ A +++ ++ WG E+G+LG+ + ++PE L+ + ISCG
Sbjct: 99 GTNHSFAWSTELNQVYCWGIGEYGKLGNKESKDLQYPEIFNGLKQPEGIQWEISEISCGE 158
Query: 124 HCTAAIAEPRENDGTISTSRLWVWGQ----------------NQGSNFPRLFWGAFTPNT 167
+ T A+ + + + S ++L+VWG NQ +W +
Sbjct: 159 NHTVAVIKQINVNNSQSQNKLYVWGSSSDWQLGIDTGKTDYVNQPLEMSPDYWEGNVESV 218
Query: 168 IICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL 227
C S +A+ + G + +WG + +LG + P I+ +K
Sbjct: 219 KAC-----SDFTIAIDKQGRIFSWGKGGFNRLGYKAEIVNQKHPLQIESLSK-------- 265
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
++I Q S G +HSAA++ NG +YTWG S GQLGH ++ ++ P+ V AL +I
Sbjct: 266 QQIIQFSLGSFHSAAITNNGRLYTWGRDSNGQLGHGQAKA---DIFPKEVQALQNTYIVS 322
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
VACG H+ AL+ L++WG + +GQLG + S + ++F + +
Sbjct: 323 VACGEGHTLALSKNNELFSWGLNSSGQLGRASENLKSS--DPKKISFFED-------KSI 373
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+ +ACG H+LV ++DG ++ WG N YGQ
Sbjct: 374 KQIACGSKHSLVLLQDGTVYSWGSNQYGQ 402
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 150/339 (44%), Gaps = 66/339 (19%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFG---CPAGANSRWLDIACGHEHTAAV 77
+ +Y WG G+ G K + L+ P E+F P G +I+CG HT AV
Sbjct: 111 NQVYCWGIGEYGKLGNK-ESKDLQYP-----EIFNGLKQPEGIQWEISEISCGENHTVAV 164
Query: 78 ---------ASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF----VKSISCGAH 124
S L+ WG++ QLG T + + + ++ ++ V+S+ +
Sbjct: 165 IKQINVNNSQSQNKLYVWGSSSDWQLGIDTGK-TDYVNQPLEMSPDYWEGNVESVKACSD 223
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI------------ICQV 172
T AI + R++ WG+ F RL + A N I Q
Sbjct: 224 FTIAIDK---------QGRIFSWGK---GGFNRLGYKAEIVNQKHPLQIESLSKQQIIQF 271
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK--I 230
S GS H A++ G L WG + GQLG G + F E L+ I
Sbjct: 272 SLGSFHSAAITNNGRLYTWGRDSNGQLGHGQAKADI-----------FPKEVQALQNTYI 320
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCS--LQSGDKELLPRRVVALDGIFIKDV 288
V+CGE H+ A+S+N E+++WGL S GQLG S L+S D P+++ + IK +
Sbjct: 321 VSVACGEGHTLALSKNNELFSWGLNSSGQLGRASENLKSSD----PKKISFFEDKSIKQI 376
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLI 327
ACG HS L G +Y+WG +Q GQLG + + + I
Sbjct: 377 ACGSKHSLVLLQDGTVYSWGSNQYGQLGFDQDSNAQNTI 415
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 120/260 (46%), Gaps = 37/260 (14%)
Query: 14 VDNIPAKSAIYVWGYNHSGQTG-RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHE 72
V+N +++ +YVWG + Q G G+ + P ++ P+ + + + +
Sbjct: 170 VNNSQSQNKLYVWGSSSDWQLGIDTGKTDYVNQPLEMSPDYWEGNVES------VKACSD 223
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
T A+ G +F+WG F +LG E +KHP +++ L + + S G+ +AAI
Sbjct: 224 FTIAIDKQGRIFSWGKGGFNRLGYKAEIVNQKHPLQIESLSKQQIIQFSLGSFHSAAIT- 282
Query: 132 PRENDGTISTSRLWVW----------GQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA 181
N+G RL+ W GQ + FP+ NT I V+CG H +A
Sbjct: 283 ---NNG-----RLYTWGRDSNGQLGHGQAKADIFPKEVQAL--QNTYIVSVACGEGHTLA 332
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
LS+ L +WG N GQLGR P+ I + E + I Q++CG HS
Sbjct: 333 LSKNNELFSWGLNSSGQLGRASENLKSSDPKKISFF--------EDKSIKQIACGSKHSL 384
Query: 242 AVSENGEVYTWGLGSVGQLG 261
+ ++G VY+WG GQLG
Sbjct: 385 VLLQDGTVYSWGSNQYGQLG 404
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 167/394 (42%), Gaps = 79/394 (20%)
Query: 62 SRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTE-----------EGRKHPEKVKQ 110
S + I CG H+ A+ ++ ++ WG N +LG E E K P KV +
Sbjct: 28 SNIVKIVCGANHSYAIDTNFEVYAWGCNLGRKLGLSDEYYNQIFQADIPEQIKIPVKVTE 87
Query: 111 LQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWG----------QNQGSNFPRLFW 160
L ++ + +IS G + + A + ++++ WG +++ +P +F
Sbjct: 88 LSNKKINNISTGTNHSFA--------WSTELNQVYCWGIGEYGKLGNKESKDLQYPEIFN 139
Query: 161 GAFTPNTI---ICQVSCGSVHVVAL---------SECGLLQAWGYNEYGQLGRGITCEGL 208
G P I I ++SCG H VA+ L WG + QLG
Sbjct: 140 GLKQPEGIQWEISEISCGENHTVAVIKQINVNNSQSQNKLYVWGSSSDWQLG-------- 191
Query: 209 QGPRVIKGYAKFLDEAPELE------KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
+ G ++++ E+ + V + A+ + G +++WG G +LG+
Sbjct: 192 ----IDTGKTDYVNQPLEMSPDYWEGNVESVKACSDFTIAIDKQGRIFSWGKGGFNRLGY 247
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
+ K P ++ +L I + G HS A+T+ G LY WG GQLG G Q +
Sbjct: 248 KAEIVNQKH--PLQIESLSKQQIIQFSLGSFHSAAITNNGRLYTWGRDSNGQLGHG-QAK 304
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ----AA 378
+ + P E +N I+ VACG HTL ++ + WG NS GQ +
Sbjct: 305 A-DIFPKEVQA-LQNTYIVS-------VACGEGHTLALSKNNELFSWGLNSSGQLGRASE 355
Query: 379 NEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 411
N KS+ P + + + ++++A G HS VL
Sbjct: 356 NLKSS---DPKKISFFEDKSIKQIACGSKHSLVL 386
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 31/184 (16%)
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWG------LGSVGQLGHCSLQSGDKEL--LPRRV 277
++ I ++ CG HS A+ N EVY WG LG + + Q+ E +P +V
Sbjct: 26 DISNIVKIVCGANHSYAIDTNFEVYAWGCNLGRKLGLSDEYYNQIFQADIPEQIKIPVKV 85
Query: 278 VALDGIFIKDVACGGVHSCALTSK-GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFR 336
L I +++ G HS A +++ +Y WG + G+LG +++ Y
Sbjct: 86 TELSNKKINNISTGTNHSFAWSTELNQVYCWGIGEYGKLG-NKESKDLQ--------YPE 136
Query: 337 NIPILVVPNGVQL----VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVD 392
L P G+Q ++CG +HT+ ++ ++ + ++ Y W S D
Sbjct: 137 IFNGLKQPEGIQWEISEISCGENHTVAVIKQINVNN--------SQSQNKLYVW-GSSSD 187
Query: 393 WCVG 396
W +G
Sbjct: 188 WQLG 191
>gi|449676845|ref|XP_002166895.2| PREDICTED: uncharacterized protein LOC100213911, partial [Hydra
magnipapillata]
Length = 725
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/372 (30%), Positives = 174/372 (46%), Gaps = 50/372 (13%)
Query: 60 ANSRWL------DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS 113
AN W+ ++ACG EH+A V G L+ +G+N++GQLG G + P VK L+
Sbjct: 30 ANKFWIKNDGVVEMACGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLNKPSFVKPLKP 89
Query: 114 EFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAF 163
E V+ ++CG + T +E + +L+ +G N+ P+
Sbjct: 90 EKVRKVACGRNHTIVYSE---------SGKLFSFGCNEDGQLGHVDKENELLPKEIES-- 138
Query: 164 TPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDE 223
P I Q++CG+ H + LSE G + WG N GQLG G E ++ KF E
Sbjct: 139 IPQMEIKQIACGTYHSIILSEDGDVYVWGNNNEGQLGLGEEVENSLPKKL-----KFKKE 193
Query: 224 APELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
+ VSCG YH+A V+ +G +YT+G +G+LG S Q + + + D
Sbjct: 194 ------VVSVSCGYYHTALVTRDGFLYTFGENELGKLGLSSSQLSNTTVPQSVAMPADND 247
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
V+CG H+ A+T +G YAWG GQLG G + L NE + I L
Sbjct: 248 EYISVSCGARHTVAITKQGHCYAWGDGSQGQLGHGTKL----LEVNEP----KQIKKLSG 299
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV---DWCVGEVRK 400
+ V+CG SHT V G++ +G +G+ + +++ PV + V
Sbjct: 300 QKCIS-VSCGESHTAVVTESGKVFTFGDGRHGKLGQGEDSFSNSFDPVYLSRFNYFNVVY 358
Query: 401 LAAGGGHSAVLA 412
++ GG H+ VLA
Sbjct: 359 VSCGGCHTLVLA 370
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 121/276 (43%), Gaps = 69/276 (25%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N+ GQ G G E + +PK+L + + ++CG+ HTA V DG
Sbjct: 163 VYVWGNNNEGQLGL-GEEVENSLPKKLKFK---------KEVVSVSCGYYHTALVTRDGF 212
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+T+G NE G+LG + QL + V ++A P +ND IS
Sbjct: 213 LYTFGENELGKLGLSSS----------QLSNTTV---------PQSVAMPADNDEYIS-- 251
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
VSCG+ H VA+++ G AWG GQLG G
Sbjct: 252 -----------------------------VSCGARHTVAITKQGHCYAWGDGSQGQLGHG 282
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
+ P+ IK + +K VSCGE H+A V+E+G+V+T+G G G+LG
Sbjct: 283 TKLLEVNEPKQIKKLSG--------QKCISVSCGESHTAVVTESGKVFTFGDGRHGKLGQ 334
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
S P + + + V+CGG H+ L
Sbjct: 335 GE-DSFSNSFDPVYLSRFNYFNVVYVSCGGCHTLVL 369
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 56/131 (42%), Gaps = 9/131 (6%)
Query: 11 ARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACG 70
AR I + Y WG GQ G + ++ PKQ+ +L G + + ++CG
Sbjct: 256 ARHTVAITKQGHCYAWGDGSQGQLGHGTKLLEVNEPKQI-KKLSG------QKCISVSCG 308
Query: 71 HEHTAAVASDGTLFTWGANEFGQLGDGTEEGRK--HPEKVKQLQSEFVKSISCGAHCTAA 128
HTA V G +FT+G G+LG G + P + + V +SCG T
Sbjct: 309 ESHTAVVTESGKVFTFGDGRHGKLGQGEDSFSNSFDPVYLSRFNYFNVVYVSCGGCHTLV 368
Query: 129 IAEPRENDGTI 139
+A + D +
Sbjct: 369 LAVHKNKDDFV 379
>gi|383456202|ref|YP_005370191.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
gi|380729703|gb|AFE05705.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
Length = 806
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/352 (33%), Positives = 158/352 (44%), Gaps = 46/352 (13%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
IA G H+ V DGT WG N +GQLGDGT R P V+ ++S A+ T
Sbjct: 446 IAAGGAHSLVVRQDGTADAWGHNGYGQLGDGTSVDRFLPGPVQVQGLTGATALSATAYHT 505
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGS------NFPRLFWGAFTPNTIICQVSCGSVHVV 180
A+A+ DGT+ W WG N + R+ T + ++ G+ H +
Sbjct: 506 LALAQ----DGTV-----WGWGYNDSGQLGDTVDMVRVTPAPLPGLTGVTALASGTYHSL 556
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
AL + G + AWG N GQLG G T + V P L +T ++ YHS
Sbjct: 557 ALKQDGTVWAWGLNNLGQLGDGTTVSRTEQMPV-----------PGLTDVTALAASTYHS 605
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
A+ ++G V+TWG S GQLG + S L P +V L G + +A G VHS AL
Sbjct: 606 LALKQDGTVWTWGYNSSGQLGDGTTAS---RLTPAQVPGLTG--VSAIAAGLVHSLALKQ 660
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLV 359
G ++AWG + GQLG G S +P+ V GV +A G H+L
Sbjct: 661 DGTVWAWGRNTDGQLGNGAAVNS-------------PVPVQVQGLTGVSAIAAGSYHSLA 707
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
+DG WG N GQ NE T + P V + V LA G HS L
Sbjct: 708 LKQDGTAWSWGRNGTGQLGNETITGSLTPVQVQ-GLTAVTALAGGDAHSMAL 758
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 138/302 (45%), Gaps = 43/302 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WGYN SGQ G +R+ P L G A +A G H+ A+ DGT
Sbjct: 514 VWGWGYNDSGQLGDT--VDMVRVTPAPLPGLTGVTA--------LASGTYHSLALKQDGT 563
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG N GQLGDGT R V L V +++ + + A+ + DGT+
Sbjct: 564 VWAWGLNNLGQLGDGTTVSRTEQMPVPGLTD--VTALAASTYHSLAL----KQDGTV--- 614
Query: 143 RLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
W WG N G+ RL T + ++ G VH +AL + G + AWG N
Sbjct: 615 --WTWGYNSSGQLGDGTTASRLTPAQVPGLTGVSAIAAGLVHSLALKQDGTVWAWGRNTD 672
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG G P ++G L ++ ++ G YHS A+ ++G ++WG
Sbjct: 673 GQLGNGAAVNSPV-PVQVQG----------LTGVSAIAAGSYHSLALKQDGTAWSWGRNG 721
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
GQLG+ ++ L P +V L + +A G HS AL G ++ WG + G+LG
Sbjct: 722 TGQLGNETIT---GSLTPVQVQGLTA--VTALAGGDAHSMALLRDGTVWTWGYNAEGELG 776
Query: 317 LG 318
G
Sbjct: 777 DG 778
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 91/190 (47%), Gaps = 27/190 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WGYN SGQ G +L P Q+P L G A IA G H+ A+ DGT
Sbjct: 614 VWTWGYNSSGQLGDGTTASRL-TPAQVP-GLTGVSA--------IAAGLVHSLALKQDGT 663
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG N GQLG+G P +V+ L V +I+ G++ + A+ + DGT
Sbjct: 664 VWAWGRNTDGQLGNGAAVNSPVPVQVQGLTG--VSAIAAGSYHSLAL----KQDGTA--- 714
Query: 143 RLWVWGQN-QGSNFPRLFWGAFTPN-----TIICQVSCGSVHVVALSECGLLQAWGYNEY 196
W WG+N G G+ TP T + ++ G H +AL G + WGYN
Sbjct: 715 --WSWGRNGTGQLGNETITGSLTPVQVQGLTAVTALAGGDAHSMALLRDGTVWTWGYNAE 772
Query: 197 GQLGRGITCE 206
G+LG G T +
Sbjct: 773 GELGDGTTLD 782
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 24 YVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTL 83
+ WG N +GQ G + L P ++ G A +A G H+ A+ DGT+
Sbjct: 715 WSWGRNGTGQLGNETITGSLT-----PVQVQGLTAVTA-----LAGGDAHSMALLRDGTV 764
Query: 84 FTWGANEFGQLGDGTEEGRKHPEKVKQLQSE 114
+TWG N G+LGDGT R P +V+ L E
Sbjct: 765 WTWGYNAEGELGDGTTLDRTAPVRVQGLVLE 795
>gi|330798916|ref|XP_003287495.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
gi|325082514|gb|EGC35994.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
Length = 1935
Score = 147 bits (370), Expect = 1e-32, Method: Composition-based stats.
Identities = 119/420 (28%), Positives = 189/420 (45%), Gaps = 96/420 (22%)
Query: 23 IYVWGYNHSGQTGRKGRE--RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
+Y WG N SGQ G G E + L +PK++ + F S + CG EHT AV S+
Sbjct: 1143 LYTWGSNQSGQLGH-GLEVNKTLSLPKRV--DFFR----GKSPIFMVECGGEHTIAVDSN 1195
Query: 81 GTLFTWGANEFGQLGDGTEE-GRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGT 138
+++WG+++FGQLG GT+ + P+ +++L + +++I+ G AH N
Sbjct: 1196 YFVYSWGSDKFGQLGHGTKAVNQSRPKVIEELTGQKIQAIAAGFAH----------NIVL 1245
Query: 139 ISTSRLWVWGQNQGSNFPRLFWGAFTPNTI--------------------ICQVSCGSVH 178
+ L+ +G +F +L G+F I I Q++CG H
Sbjct: 1246 KKSGELFSFGY---GDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIACGFGH 1302
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
V SE G + +WG + GQLG + E + PR+I+ L +T++SCG +
Sbjct: 1303 SVICSENGEVYSWGLGKQGQLGHKVF-ENISKPRLIE----------TLRGVTKISCGHF 1351
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK-ELLPRRVVALDGIFIKDVACGGVHSCA 297
H+ A ++ VY+WG G +LGH S DK E +P+ V + V CG H+
Sbjct: 1352 HTVATTDLKNVYSWGSGEHMKLGH----SSDKDESVPKVVDFFIQKNVSKVVCGQNHTMT 1407
Query: 298 LT---------------------SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFR 336
+T S +YAWG ++ G+LGLG +S P F
Sbjct: 1408 ITFPDDLNNSNQDDEDEENMNGKSSSPIYAWGSAEHGKLGLGGDLKS----P------FF 1457
Query: 337 NIPILVVPNGVQL-----VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
+ PI GV ++CG + + + I+ WG +GQ N K+ W P+ +
Sbjct: 1458 DKPIPTAIKGVNSLNLIDISCGSDFSAMITSNNAIYVWGCGRFGQIGNGKNDDVWVPTRI 1517
Score = 134 bits (336), Expect = 1e-28, Method: Composition-based stats.
Identities = 107/369 (28%), Positives = 165/369 (44%), Gaps = 55/369 (14%)
Query: 57 PAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGR--KHPEKVKQLQSE 114
P + + ++CG +H A + DG L+TWG+N+ GQLG G E + P++V + +
Sbjct: 1117 PLKNEKKAIKVSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFRGK 1176
Query: 115 F-VKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT-----PNTI 168
+ + CG T A+ S ++ WG ++ F +L G P I
Sbjct: 1177 SPIFMVECGGEHTIAVD---------SNYFVYSWGSDK---FGQLGHGTKAVNQSRPKVI 1224
Query: 169 -------ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV----IKGY 217
I ++ G H + L + G L ++GY ++GQLG G R+ I G
Sbjct: 1225 EELTGQKIQAIAAGFAHNIVLKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGG 1284
Query: 218 AKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV 277
+ D KITQ++CG HS SENGEVY+WGLG GQLGH ++ K PR +
Sbjct: 1285 LQHHDGG----KITQIACGFGHSVICSENGEVYSWGLGKQGQLGHKVFENISK---PRLI 1337
Query: 278 VALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRN 337
L G + ++CG H+ A T +Y+WG + + LG + +P D +
Sbjct: 1338 ETLRG--VTKISCGHFHTVATTDLKNVYSWGSGE--HMKLGHSSDKDESVPKVVDFF--- 1390
Query: 338 IPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV-DWCVG 396
+ V V CG +HT+ ++ NS +E++ SP+ W
Sbjct: 1391 -----IQKNVSKVVCGQNHTMTITFPDDLN----NSNQDDEDEENMNGKSSSPIYAWGSA 1441
Query: 397 EVRKLAAGG 405
E KL GG
Sbjct: 1442 EHGKLGLGG 1450
Score = 54.7 bits (130), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 16 NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANS-RWLDIACGHEHT 74
N + S IY WG G+ G G + K +P + G NS +DI+CG + +
Sbjct: 1428 NGKSSSPIYAWGSAEHGKLGLGGDLKSPFFDKPIPTAI----KGVNSLNLIDISCGSDFS 1483
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
A + S+ ++ WG FGQ+G+G + P ++
Sbjct: 1484 AMITSNNAIYVWGCGRFGQIGNGKNDDVWVPTRI 1517
>gi|444919547|ref|ZP_21239559.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444708350|gb|ELW49425.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 684
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 134/431 (31%), Positives = 190/431 (44%), Gaps = 79/431 (18%)
Query: 3 INEIIGETARPVDNIPAKS--AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA 60
++E++ TA ++ +S ++ WG N SGQ G +L +P + G
Sbjct: 135 LSEVVAVTAGSSHSLALRSDGTVWAWGANASGQLGEGTTTNRL-----VPVPVLGL---- 185
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
S + + G H+ A+ SDGT++ WGAN GQLGDGT R P +V V ++
Sbjct: 186 -SEVVAVEAGSSHSLALRSDGTVWAWGANASGQLGDGTTTKRLVPVQVL----SGVVAME 240
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI------------ 168
G+ + A+ NDGT+ W WG N F G +T+
Sbjct: 241 AGSGYSLAV----RNDGTV-----WAWGYN--------FSGQLGDDTVTSRSTPVQVLGL 283
Query: 169 --ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPE 226
+ V+ GS +AL G + AWG N+YGQ G G T F +A
Sbjct: 284 SEVVAVAAGSSLSLALRSDGTVWAWGSNDYGQRGEGTTSN-----------RAFPVQARG 332
Query: 227 LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
L V+ G HS AV +G V+ WG + GQLG + + + P +V L G+
Sbjct: 333 LSGGVAVAAGYAHSLAVRSDGTVWAWGSNASGQLGEGTTSNRSE---PVQVQGLSGVVA- 388
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-N 345
V+ G S A+ S G ++AWG + +GQLG G T R +P+ V +
Sbjct: 389 -VSAGASSSLAIRSDGTVWAWGSNASGQLGDGTTTD-------------RLVPVQVQGLS 434
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGG 405
GV V G S +L DG + GWGYN YGQ S + P V G V +AAG
Sbjct: 435 GVVAVVAGTSFSLAVRNDGTVWGWGYNGYGQLGTFTSLFVLVPVQVTGLSGVV-AVAAGN 493
Query: 406 GHS-AVLADAC 415
HS AV +D
Sbjct: 494 LHSLAVRSDGT 504
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 121/377 (32%), Positives = 169/377 (44%), Gaps = 58/377 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + ++ WG N SGQ G +G P Q+ L G A ++ G + A
Sbjct: 349 VRSDGTVWAWGSNASGQLG-EGTTSNRSEPVQVQ-GLSGVVA--------VSAGASSSLA 398
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ SDGT++ WG+N GQLGDGT R P +V+ L V ++ G + A+ ND
Sbjct: 399 IRSDGTVWAWGSNASGQLGDGTTTDRLVPVQVQGLSG--VVAVVAGTSFSLAV----RND 452
Query: 137 GTISTSRLWVWGQN---QGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECGLL 188
GT+ W WG N Q F LF P + + V+ G++H +A+ G +
Sbjct: 453 GTV-----WGWGYNGYGQLGTFTSLF--VLVPVQVTGLSGVVAVAAGNLHSLAVRSDGTV 505
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
A G N+ GQLG G + P + G L + V+ G+ HS AV +G
Sbjct: 506 WALGRNDNGQLGDG-SWTNRSAPVQVTG----------LSGVVSVAAGDSHSLAVRYDGS 554
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
V+ WG S GQLG S + P +V L G VA +S A+ G ++AWG
Sbjct: 555 VWAWGYNSFGQLGDGSWF---QRSAPVQVTGLSGR--GSVAASSDYSMAVRYDGTVWAWG 609
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHG 368
+ GQLG G T S L+P + GV V G SH+L DG +
Sbjct: 610 FNLYGQLGDGT-TSSNQLVPVQVQQL----------RGVVAVEVGSSHSLALRSDGTVWT 658
Query: 369 WGYNSYGQAANEKSTYA 385
WGYNS+GQ N YA
Sbjct: 659 WGYNSFGQLGNGPPLYA 675
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 172/386 (44%), Gaps = 63/386 (16%)
Query: 1 MDINEIIGETARPVDNIPAKS--AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPA 58
+ ++E++ A + ++ ++ ++ WGYN GQ G + P ++ G
Sbjct: 33 LGLSEVVAAAAGSIHSLALRNDGTVWAWGYNGYGQLGNGSLGSRAE-----PVQVQGLSG 87
Query: 59 GANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKS 118
G + + GH H+ AV DGT++ WG N GQLG+GT R P +V+ L SE V
Sbjct: 88 G-----VSVDAGHYHSLAVRDDGTVWAWGDNPNGQLGEGTTTRRLVPVQVQGL-SEVVAV 141
Query: 119 ISCGAHCTAAIAEPRENDGTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQV 172
+ +H A +DGT+ W WG N +G+ RL + + V
Sbjct: 142 TAGSSHSLA-----LRSDGTV-----WAWGANASGQLGEGTTTNRLVPVPVLGLSEVVAV 191
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
GS H +AL G + AWG N GQLG G T + L +V+ G +
Sbjct: 192 EAGSSHSLALRSDGTVWAWGANASGQLGDGTTTKRLVPVQVLSG-------------VVA 238
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
+ G +S AV +G V+ WG GQLG ++ S P +V+ L + VA G
Sbjct: 239 MEAGSGYSLAVRNDGTVWAWGYNFSGQLGDDTVTS---RSTPVQVLGLSEVVA--VAAGS 293
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLV 350
S AL S G ++AWG + GQ G E T R P+ + GV V
Sbjct: 294 SLSLALRSDGTVWAWGSNDYGQRG-------------EGTTSNRAFPVQARGLSGGVA-V 339
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQ 376
A G++H+L DG + WG N+ GQ
Sbjct: 340 AAGYAHSLAVRSDGTVWAWGSNASGQ 365
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 154/341 (45%), Gaps = 54/341 (15%)
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
DGT++ G N GQLGDGT + R P +V L SE V + + H A NDGT+
Sbjct: 4 DGTVWAAGNNGSGQLGDGTRDNRSTPVQVLGL-SEVVAAAAGSIHSLA-----LRNDGTV 57
Query: 140 STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQ---------VSCGSVHVVALSECGLLQA 190
W WG N + +L G+ Q V G H +A+ + G + A
Sbjct: 58 -----WAWGYN---GYGQLGNGSLGSRAEPVQVQGLSGGVSVDAGHYHSLAVRDDGTVWA 109
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG N GQLG G T L P ++G L ++ V+ G HS A+ +G V+
Sbjct: 110 WGDNPNGQLGEGTTTRRLV-PVQVQG----------LSEVVAVTAGSSHSLALRSDGTVW 158
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
WG + GQLG + L+P V+ L + V G HS AL S G ++AWG +
Sbjct: 159 AWGANASGQLGEGTTT---NRLVPVPVLGLSEVVA--VEAGSSHSLALRSDGTVWAWGAN 213
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWG 370
+GQLG G T+ R +P+ V+ +GV + G ++L DG + WG
Sbjct: 214 ASGQLGDGTTTK-------------RLVPVQVL-SGVVAMEAGSGYSLAVRNDGTVWAWG 259
Query: 371 YNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
YN GQ ++ T P V + EV +AAG S L
Sbjct: 260 YNFSGQLGDDTVTSRSTPVQVL-GLSEVVAVAAGSSLSLAL 299
>gi|255563857|ref|XP_002522929.1| uvb-resistance protein uvr8, putative [Ricinus communis]
gi|223537856|gb|EEF39472.1| uvb-resistance protein uvr8, putative [Ricinus communis]
Length = 437
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/326 (33%), Positives = 161/326 (49%), Gaps = 44/326 (13%)
Query: 63 RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG 122
R L I+ G H+ A+ S + TWG E GQLG G + R P + L+ + S+ CG
Sbjct: 15 RVLLISAGASHSVALLSGNVVCTWGRGEDGQLGHGDAQDRLSPTILSTLEGLEIISVICG 74
Query: 123 AHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQ 171
A T A +E + + W WG +F RL G FTP I I Q
Sbjct: 75 ADHTIAYSESHTDVYS------WGWG-----DFGRLGHGNSSDLFTPQPIRQLHGLKIKQ 123
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
++CG H +A++ G +Q+WG N+ GQLG G T + L P+ I+ + I
Sbjct: 124 IACGDSHCLAVTMEGQVQSWGRNQNGQLGLGTTEDSLV-PQKIQAFQGV--------PIK 174
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
V+ G H+AAV+E+GE+Y WG G G LG L L+P +V G + VACG
Sbjct: 175 MVAAGAEHTAAVTEDGELYGWGWGRYGNLG---LGDRKDRLVPEKVSLPHGEKMVMVACG 231
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVA 351
H+ +++S G LY +G S+ GQLG G LIP++ + + + ++
Sbjct: 232 WRHTISVSSSGGLYTYGWSKYGQLGHGDYAD--HLIPHQLEALQGSF--------ISQIS 281
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQA 377
G HT+ DG+++GWG+N +GQ
Sbjct: 282 GGWRHTMAVTSDGKLYGWGWNKFGQV 307
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 115/378 (30%), Positives = 172/378 (45%), Gaps = 60/378 (15%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
+ + WG GQ G + Q R+ + L G + + CG +HT A +
Sbjct: 33 NVVCTWGRGEDGQLGHG--DAQDRLSPTILSTLEGLEI------ISVICGADHTIAYSES 84
Query: 81 GT-LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGT 138
T +++WG +FG+LG G P+ ++QL +K I+CG +HC A E G
Sbjct: 85 HTDVYSWGWGDFGRLGHGNSSDLFTPQPIRQLHGLKIKQIACGDSHCLAVTME-----GQ 139
Query: 139 ISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQA 190
+ + WG+NQ + P I I V+ G+ H A++E G L
Sbjct: 140 VQS-----WGRNQNGQLGLGTTEDSLVPQKIQAFQGVPIKMVAAGAEHTAAVTEDGELYG 194
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG+ YG LG G + L +V P EK+ V+CG H+ +VS +G +Y
Sbjct: 195 WGWGRYGNLGLGDRKDRLVPEKV---------SLPHGEKMVMVACGWRHTISVSSSGGLY 245
Query: 251 TWGLGSVGQLGHCSLQSGD--KELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
T+G GQLGH GD L+P ++ AL G FI ++ G H+ A+TS G LY WG
Sbjct: 246 TYGWSKYGQLGH-----GDYADHLIPHQLEALQGSFISQISGGWRHTMAVTSDGKLYGWG 300
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRDGR 365
++ GQ+G+G D R+ P+ V + V L++CG HTL
Sbjct: 301 WNKFGQVGVG-------------DNVDRSSPVQVKLPLEQKVILISCGWRHTLAVTERQN 347
Query: 366 IHGWGYNSYGQAANEKST 383
+ WG + GQ N + T
Sbjct: 348 VFSWGRGTNGQLGNGECT 365
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 164/358 (45%), Gaps = 66/358 (18%)
Query: 1 MDINEIIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA 60
++I +I + + + +Y WG+ G+ G G L P+ + +L G
Sbjct: 66 LEIISVICGADHTIAYSESHTDVYSWGWGDFGRLGH-GNSSDLFTPQPIR-QLHGL---- 119
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
+ IACG H AV +G + +WG N+ GQLG GT E P+K++ Q +K ++
Sbjct: 120 --KIKQIACGDSHCLAVTMEGQVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVPIKMVA 177
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQ----NQGSNFPRLFWGAFTPNTI-------I 169
GA TAA+ E E G W WG+ G RL P + +
Sbjct: 178 AGAEHTAAVTEDGELYG-------WGWGRYGNLGLGDRKDRLV-----PEKVSLPHGEKM 225
Query: 170 CQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK 229
V+CG H +++S G L +G+++YGQLG G + L ++ EA +
Sbjct: 226 VMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDYADHLIPHQL---------EALQGSF 276
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG---HCSLQSGDKELLP--RRVVALDGIF 284
I+Q+S G H+ AV+ +G++Y WG GQ+G + S + LP ++V+
Sbjct: 277 ISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDRSSPVQVKLPLEQKVIL----- 331
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
++CG H+ A+T + +++WG GQLG G T RN+P+++
Sbjct: 332 ---ISCGWRHTLAVTERQNVFSWGRGTNGQLGNGECTD-------------RNVPVII 373
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 88/193 (45%), Gaps = 15/193 (7%)
Query: 227 LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
+ ++ +S G HS A+ V TWG G GQLGH Q L P + L+G+ I
Sbjct: 13 VRRVLLISAGASHSVALLSGNVVCTWGRGEDGQLGHGDAQ---DRLSPTILSTLEGLEII 69
Query: 287 DVACGGVHSCALT-SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
V CG H+ A + S +Y+WG G+LG G + F+ P R + L +
Sbjct: 70 SVICGADHTIAYSESHTDVYSWGWGDFGRLGHGNSSDLFTPQP------IRQLHGLKIKQ 123
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAG 404
+ACG SH L +G++ WG N GQ + + P + G ++ +AAG
Sbjct: 124 ----IACGDSHCLAVTMEGQVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVPIKMVAAG 179
Query: 405 GGHSAVLADACSL 417
H+A + + L
Sbjct: 180 AEHTAAVTEDGEL 192
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 21/131 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTA 75
+ + +Y WG+N GQ G +R + +LP E + + I+CG HT
Sbjct: 290 VTSDGKLYGWGWNKFGQVGVGDNVDRSSPVQVKLPLE---------QKVILISCGWRHTL 340
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
AV +F+WG GQLG+G R P +K L + SCG H +++ +
Sbjct: 341 AVTERQNVFSWGRGTNGQLGNGECTDRNVPVIIKALSVDG----SCGQHIESSMVDS--- 393
Query: 136 DGTISTSRLWV 146
S+ + WV
Sbjct: 394 ----SSGKTWV 400
>gi|426255638|ref|XP_004021455.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Ovis aries]
Length = 1057
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/403 (29%), Positives = 188/403 (46%), Gaps = 52/403 (12%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----VNKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLLGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
I C+ P++IK Q++ G HS ++ +G ++ WG GQLG
Sbjct: 173 IDCKKQASPQLIKSLLGI--------PFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYPS----PVDWCVGE---VRKLAAGGGHS 408
+N KS + W+P P D+ E V+++ +GG S
Sbjct: 332 TSNRKSPFTVKGNWFPYNGQCPPDFDSEEYFCVKRIFSGGDQS 374
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI +A GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGIDCKKQAS-----PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 125/256 (48%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG G + + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ IA G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GIDCKKQASPQLIKSLLGIP------FMQIAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+++ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A + G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|344247622|gb|EGW03726.1| putative E3 ubiquitin-protein ligase HERC4 [Cricetulus griseus]
Length = 835
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 122/406 (30%), Positives = 190/406 (46%), Gaps = 58/406 (14%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F AN + D+ CG HT V DGT++
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRK--SDFF-----ANKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE--NDGTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLLGSEEYIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
I C+ P++IK QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 IDCKKQTSPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V VACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WY------PSPVD----WCVGEVRKLAAGGGHS 408
+N KS + W+ P +D +C V+++ +GG S
Sbjct: 332 TSNRKSPFTVKGNWFSYNGQCPQDIDSEDCFC---VKRIFSGGDQS 374
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 125/256 (48%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYSWGLDSDGQLGLLGSEEYIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG G + + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQV+CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQVACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GIDCKKQTSPQLIKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYN 194
T +GQ N S+ PR + +I+ QV+CG H A + G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQVACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGST-SNRKSPFTVKG 343
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 363
+ WG + GQLGLG L P +SD +F N V+ V CG HT+ + D
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSD-FFAN-------KKVRDVGCGLRHTVFVLDD 52
Query: 364 GRIHGWGYNSYGQAANEKS 382
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|354477678|ref|XP_003501046.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Cricetulus griseus]
Length = 1057
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 122/406 (30%), Positives = 190/406 (46%), Gaps = 58/406 (14%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F AN + D+ CG HT V DGT++
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRK--SDFF-----ANKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE--NDGTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLLGSEEYIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
I C+ P++IK QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 IDCKKQTSPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V VACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WY------PSPVD----WCVGEVRKLAAGGGHS 408
+N KS + W+ P +D +C V+++ +GG S
Sbjct: 332 TSNRKSPFTVKGNWFSYNGQCPQDIDSEDCFC---VKRIFSGGDQS 374
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 125/256 (48%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYSWGLDSDGQLGLLGSEEYIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG G + + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQV+CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQVACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GIDCKKQTSPQLIKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYN 194
T +GQ N S+ PR + +I+ QV+CG H A + G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQVACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 363
+ WG + GQLGLG L P +SD +F N V+ V CG HT+ + D
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSD-FFAN-------KKVRDVGCGLRHTVFVLDD 52
Query: 364 GRIHGWGYNSYGQAANEKS 382
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|354477676|ref|XP_003501045.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Cricetulus griseus]
Length = 1049
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 122/406 (30%), Positives = 190/406 (46%), Gaps = 58/406 (14%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F AN + D+ CG HT V DGT++
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRK--SDFF-----ANKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE--NDGTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLLGSEEYIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
I C+ P++IK QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 IDCKKQTSPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V VACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WY------PSPVD----WCVGEVRKLAAGGGHS 408
+N KS + W+ P +D +C V+++ +GG S
Sbjct: 332 TSNRKSPFTVKGNWFSYNGQCPQDIDSEDCFC---VKRIFSGGDQS 374
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 125/256 (48%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYSWGLDSDGQLGLLGSEEYIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG G + + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQV+CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQVACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GIDCKKQTSPQLIKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYN 194
T +GQ N S+ PR + +I+ QV+CG H A + G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQVACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 363
+ WG + GQLGLG L P +SD +F N V+ V CG HT+ + D
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSD-FFAN-------KKVRDVGCGLRHTVFVLDD 52
Query: 364 GRIHGWGYNSYGQAANEKS 382
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|426255640|ref|XP_004021456.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Ovis aries]
Length = 1049
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/403 (29%), Positives = 188/403 (46%), Gaps = 52/403 (12%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----VNKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLLGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
I C+ P++IK Q++ G HS ++ +G ++ WG GQLG
Sbjct: 173 IDCKKQASPQLIKSLLGI--------PFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYPS----PVDWCVGE---VRKLAAGGGHS 408
+N KS + W+P P D+ E V+++ +GG S
Sbjct: 332 TSNRKSPFTVKGNWFPYNGQCPPDFDSEEYFCVKRIFSGGDQS 374
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI +A GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGIDCKKQAS-----PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 124/256 (48%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG G + + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH-SAAVSE 245
+ +G YGQLG T + +V + +TQ++CG H SA V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ IA G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GIDCKKQASPQLIKSLLGIP------FMQIAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+++ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A + G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|115304951|gb|AAI23843.1| Hect domain and RLD 4 [Bos taurus]
Length = 853
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/403 (29%), Positives = 188/403 (46%), Gaps = 52/403 (12%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLLGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
I C+ P++IK Q++ G HS ++ +G ++ WG GQLG
Sbjct: 173 IDCKKQASPQLIKSLLGI--------PFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYPS----PVDWCVGE---VRKLAAGGGHS 408
+N KS + W+P P D+ E V+++ +GG S
Sbjct: 332 TSNRKSPFTVKGNWFPYNGQCPPDFDSEEYFCVKRIFSGGDQS 374
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI +A GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGIDCKKQAS-----PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 125/256 (48%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG G + + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ IA G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GIDCKKQASPQLIKSLLGIP------FMQIAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+++ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A + G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGST-SNRKSPFTVKG 343
>gi|405345706|ref|ZP_11022499.1| RCC1 repeat domain protein [Chondromyces apiculatus DSM 436]
gi|397093755|gb|EJJ24452.1| RCC1 repeat domain protein [Myxococcus sp. (contaminant ex DSM
436)]
Length = 747
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/382 (31%), Positives = 178/382 (46%), Gaps = 58/382 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++ WG N+ GQ G G ++ +P LP L G + ++ GH HTAA
Sbjct: 414 LGANGRLWAWGDNNQGQLG-NGTQQNSSLP--LPVNLTGITS--------VSSGHRHTAA 462
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DGT+++WG N++GQLGDGT R P +V L V SI+ G + + A+ ++
Sbjct: 463 LRLDGTVWSWGTNQYGQLGDGTRTDRSTPVQVPGLTG--VTSIATGDYHSLAL----RSN 516
Query: 137 GTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
GT+ W WG N+ G+ R + T I ++ G H +AL G + A
Sbjct: 517 GTV-----WGWGFNRYGQLGDGTTVDRTQPVQVSGLTNIVSIAAGGGHSLALRSDGTVWA 571
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
+GYN GQLG G + + +A L + ++ G+ +S A+ +G V+
Sbjct: 572 FGYNFDGQLGNG-----------TRTWTILPVQAVGLGNVVSLAAGKMYSLALRADGTVW 620
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
WG + GQLG + Q +P +V L I + G HS AL S G ++AWG +
Sbjct: 621 AWGYNASGQLGVGTTQG---SAVPLQVSGLSA--ITSITAGTYHSLALRSDGWVWAWGFN 675
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGW 369
GQLG G SD R P LVV + + G H+L DG + W
Sbjct: 676 FEGQLGNG-----------TSDN--RLTPGLVVSMSNATAIFAGDLHSLAVRADGTLWAW 722
Query: 370 GYNSYGQAANEKSTYAWYPSPV 391
G NS+GQ + AW+P V
Sbjct: 723 GLNSHGQLGTGDTVEAWFPVQV 744
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 116/374 (31%), Positives = 161/374 (43%), Gaps = 72/374 (19%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQL---RIPKQLPPELFGCPAGANSRWLDIACGHEH 73
+ A++ WG N R RQL + P G G + + G H
Sbjct: 314 VRTDGAVWAWGDN---------RYRQLGTGNLTSSAVPLHAGMTGG-----VTLVAGFRH 359
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
+ A+ +DGT ++WG N FGQLGD T + R P +V L + S H A
Sbjct: 360 SVALGADGTAWSWGDNVFGQLGDTTFQPRMAPVQVTGLALGRADATSGQLHTVMLGAN-- 417
Query: 134 ENDGTISTSRLWVWGQN----------QGSNFPRLFWGAFTPN-TIICQVSCGSVHVVAL 182
RLW WG N Q S+ P N T I VS G H AL
Sbjct: 418 --------GRLWAWGDNNQGQLGNGTQQNSSLP------LPVNLTGITSVSSGHRHTAAL 463
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
G + +WG N+YGQLG G + +V P L +T ++ G+YHS A
Sbjct: 464 RLDGTVWSWGTNQYGQLGDGTRTDRSTPVQV-----------PGLTGVTSIATGDYHSLA 512
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
+ NG V+ WG GQLG + P +V L I +A GG HS AL S G
Sbjct: 513 LRSNGTVWGWGFNRYGQLGDGTTV---DRTQPVQVSGLTNIV--SIAAGGGHSLALRSDG 567
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++A+G + GQLG G TR+++++P ++ V V +A G ++L
Sbjct: 568 TVWAFGYNFDGQLGNG--TRTWTILPVQA----------VGLGNVVSLAAGKMYSLALRA 615
Query: 363 DGRIHGWGYNSYGQ 376
DG + WGYN+ GQ
Sbjct: 616 DGTVWAWGYNASGQ 629
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 117/404 (28%), Positives = 177/404 (43%), Gaps = 64/404 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++ WG N GQ G R + P + A + I+ G H A
Sbjct: 215 LRADGTVWAWGDNRYGQLGDGTTVR-----RAAPVRVANLDAVTH-----ISAGAYHALA 264
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ +DGT + WG N FGQLGDGT R P + ++ +++ G + + A+ D
Sbjct: 265 LRADGTAWAWGYNAFGQLGDGTTVQRTLPVLIGLTET---RTVVAGNYHSLAV----RTD 317
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQ--------VSCGSVHVVALSECGLL 188
G + W WG N+ + +L G T + + + G H VAL G
Sbjct: 318 GAV-----WAWGDNR---YRQLGTGNLTSSAVPLHAGMTGGVTLVAGFRHSVALGADGTA 369
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG N +GQLG T + P + G A +A + G+ H+ + NG
Sbjct: 370 WSWGDNVFGQLGD-TTFQPRMAPVQVTGLALGRADA---------TSGQLHTVMLGANGR 419
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
++ WG + GQLG+ + Q+ L V L GI V+ G H+ AL G +++WG
Sbjct: 420 LWAWGDNNQGQLGNGTQQNSSLPL----PVNLTGI--TSVSSGHRHTAALRLDGTVWSWG 473
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIH 367
+Q GQLG G +T R+ P+ V GV +A G H+L +G +
Sbjct: 474 TNQYGQLGDGTRTD-------------RSTPVQVPGLTGVTSIATGDYHSLALRSNGTVW 520
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
GWG+N YGQ + + P V + + +AAGGGHS L
Sbjct: 521 GWGFNRYGQLGDGTTVDRTQPVQVS-GLTNIVSIAAGGGHSLAL 563
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/371 (29%), Positives = 162/371 (43%), Gaps = 67/371 (18%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ ++ ++ WG+N GQ G + K P ++ G + + +A G +++ A
Sbjct: 65 VHSEGTVFAWGFNRLGQLGDGTTQ-----DKAAPVQVAGVASA-----VSVAAGDQYSLA 114
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ +G ++ WG N GQLGDGT R P +V L ++ V S AH A A D
Sbjct: 115 LDENGDVWAWGDNASGQLGDGTLTPRAQPRRVSGL-TQGVSLASGFAHAVALRA-----D 168
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI---------ICQVSCGSVHVVALSECGL 187
GT+ W WG N+ + T + + I V G +AL G
Sbjct: 169 GTV-----WAWGDNRSNQLGS---ATLTRSPVPIPVPGLSDIVAVVAGGSSSLALRADGT 220
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWG N YGQLG G T RV L+ +T +S G YH+ A+ +G
Sbjct: 221 VWAWGDNRYGQLGDGTTVRRAAPVRV-----------ANLDAVTHISAGAYHALALRADG 269
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF-IKDVACGGVHSCALTSKGALYA 306
+ WG + GQL GD + R + L G+ + V G HS A+ + GA++A
Sbjct: 270 TAWAWGYNAFGQL-------GDGTTVQRTLPVLIGLTETRTVVAGNYHSLAVRTDGAVWA 322
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQLVACGHSHTLVYMRDGR 365
WG ++ QLG G T S +P+ + GV LVA G H++ DG
Sbjct: 323 WGDNRYRQLGTGNLTSS-------------AVPLHAGMTGGVTLVA-GFRHSVALGADGT 368
Query: 366 IHGWGYNSYGQ 376
WG N +GQ
Sbjct: 369 AWSWGDNVFGQ 379
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 137/331 (41%), Gaps = 52/331 (15%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+A G H+ AV S+GT+F WG N GQLGDGT + + P +V + S S++ G +
Sbjct: 55 LAVGQYHSLAVHSEGTVFAWGFNRLGQLGDGTTQDKAAPVQVAGVASAV--SVAAGDQYS 112
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVS---------CGSV 177
A+ E + +W WG N G TP +VS G
Sbjct: 113 LALDENGD---------VWAWGDNASGQLGD---GTLTPRAQPRRVSGLTQGVSLASGFA 160
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H VAL G + AWG N QLG + P I P L I V G
Sbjct: 161 HAVALRADGTVWAWGDNRSNQLGSATLT---RSPVPIP--------VPGLSDIVAVVAGG 209
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
S A+ +G V+ WG GQLG + + P RV LD + ++ G H+ A
Sbjct: 210 SSSLALRADGTVWAWGDNRYGQLGDGTTV---RRAAPVRVANLDA--VTHISAGAYHALA 264
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT 357
L + G +AWG + GQLG + T R +P+L+ + V G+ H+
Sbjct: 265 LRADGTAWAWGYNAFGQLG-------------DGTTVQRTLPVLIGLTETRTVVAGNYHS 311
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKSTYAWYP 388
L DG + WG N Y Q T + P
Sbjct: 312 LAVRTDGAVWAWGDNRYRQLGTGNLTSSAVP 342
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 84/180 (46%), Gaps = 18/180 (10%)
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
+++ G+YHS AV G V+ WG +GQLG + Q DK P +V + VA G
Sbjct: 54 RLAVGQYHSLAVHSEGTVFAWGFNRLGQLGDGTTQ--DKAA-PVQVAGVASAV--SVAAG 108
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVA 351
+S AL G ++AWG + +GQLG G +L P R + L GV L A
Sbjct: 109 DQYSLALDENGDVWAWGDNASGQLGDG------TLTPRAQP---RRVSGLT--QGVSL-A 156
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
G +H + DG + WG N Q + T + P PV + ++ + AGG S L
Sbjct: 157 SGFAHAVALRADGTVWAWGDNRSNQLGSATLTRSPVPIPVP-GLSDIVAVVAGGSSSLAL 215
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N GQ G + +L P L + A + I G H+ AV +DGT
Sbjct: 669 VWAWGFNFEGQLGNGTSD------NRLTPGLVVSMSNATA----IFAGDLHSLAVRADGT 718
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQL 111
L+ WG N GQLG G P +V+ L
Sbjct: 719 LWAWGLNSHGQLGTGDTVEAWFPVQVQGL 747
>gi|379318630|pdb|4DNU|A Chain A, Crystal Structure Of The W285a Mutant Of Uvb-Resistance
Protein Uvr8
Length = 372
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/324 (33%), Positives = 162/324 (50%), Gaps = 44/324 (13%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
L I+ G H+ A+ S + +WG E GQLG G E R P ++ L + S++CGA
Sbjct: 9 LIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGAD 68
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVS 173
T A ++ S ++ WG +F RL G FTP I I Q++
Sbjct: 69 HTVAYSQ--------SGXEVYSWGWG---DFGRLGHGNSSDLFTPLPIKALHGIRIKQIA 117
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
CG H +A++ G +Q+WG N+ GQLG G T + L P+ I+ + E +I V
Sbjct: 118 CGDSHCLAVTXEGEVQSWGRNQNGQLGLGDTEDSLV-PQKIQAF--------EGIRIKXV 168
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
+ G H+AAV+E+G++Y WG G G LG L L+P RV + G VACG
Sbjct: 169 AAGAEHTAAVTEDGDLYGWGWGRYGNLG---LGDRTDRLVPERVTSTGGEKXSXVACGWR 225
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG 353
H+ +++ GALY +G S+ GQLG G LIP++ + + + ++ G
Sbjct: 226 HTISVSYSGALYTYGWSKYGQLGHGDLED--HLIPHKLEALSNSF--------ISQISGG 275
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQA 377
HT DG+++GWG+N +GQ
Sbjct: 276 ARHTXALTSDGKLYGWGWNKFGQV 299
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 172/383 (44%), Gaps = 62/383 (16%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT-LF 84
WG GQ G E + P QL A + + + CG +HT A + G ++
Sbjct: 30 WGRGEDGQLGHGDAEDRPS-PTQLS-------ALDGHQIVSVTCGADHTVAYSQSGXEVY 81
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGTISTSR 143
+WG +FG+LG G P +K L +K I+CG +HC A E G + +
Sbjct: 82 SWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTXE-----GEVQS-- 134
Query: 144 LWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAWG 192
WG+NQ +L G + P I I V+ G+ H A++E G L WG
Sbjct: 135 ---WGRNQNG---QLGLGDTEDSLVPQKIQAFEGIRIKXVAAGAEHTAAVTEDGDLYGWG 188
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
+ YG LG G + L RV + EK + V+CG H+ +VS +G +YT+
Sbjct: 189 WGRYGNLGLGDRTDRLVPERVT---------STGGEKXSXVACGWRHTISVSYSGALYTY 239
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G GQLGH L+ L+P ++ AL FI ++ G H+ ALTS G LY WG ++
Sbjct: 240 GWSKYGQLGHGDLED---HLIPHKLEALSNSFISQISGGARHTXALTSDGKLYGWGWNKF 296
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQLV--ACGHSHTLVYMRDGRIHGW 369
GQ+G+G S P+ V P+ ++V +CG HTL + W
Sbjct: 297 GQVGVGNNLDQCS-------------PVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAW 343
Query: 370 GYNSYGQAANEKSTYAWYPSPVD 392
G + GQ +S +P ++
Sbjct: 344 GRGTNGQLGIGESVDRNFPKIIE 366
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 147/312 (47%), Gaps = 34/312 (10%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG+ G+ G G L P LP + R IACG H AV +G
Sbjct: 80 VYSWGWGDFGRLGH-GNSSDLFTP--LPIKAL-----HGIRIKQIACGDSHCLAVTXEGE 131
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ +WG N+ GQLG G E P+K++ + +K ++ GA TAA+ E DG +
Sbjct: 132 VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKXVAAGAEHTAAVTE----DGDLYG- 186
Query: 143 RLWVWGQ----NQGSNFPRLFWGAFTPN--TIICQVSCGSVHVVALSECGLLQAWGYNEY 196
W WG+ G RL T V+CG H +++S G L +G+++Y
Sbjct: 187 --WGWGRYGNLGLGDRTDRLVPERVTSTGGEKXSXVACGWRHTISVSYSGALYTYGWSKY 244
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG G + L ++ EA I+Q+S G H+ A++ +G++Y WG
Sbjct: 245 GQLGHGDLEDHLIPHKL---------EALSNSFISQISGGARHTXALTSDGKLYGWGWNK 295
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
GQ+G + + + P +V D + V+CG H+ A+T + ++AWG GQLG
Sbjct: 296 FGQVG---VGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG 352
Query: 317 LGPQT-RSFSLI 327
+G R+F I
Sbjct: 353 IGESVDRNFPKI 364
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 113/242 (46%), Gaps = 23/242 (9%)
Query: 165 PNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
P + +S G+ H VAL ++ +WG E GQLG G E P + A
Sbjct: 4 PPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLS--------A 54
Query: 225 PELEKITQVSCGEYHSAAVSENG-EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
+ +I V+CG H+ A S++G EVY+WG G G+LGH + P + AL GI
Sbjct: 55 LDGHQIVSVTCGADHTVAYSQSGXEVYSWGWGDFGRLGHGN---SSDLFTPLPIKALHGI 111
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
IK +ACG H A+T +G + +WG +Q GQLGLG S L+P + F I I
Sbjct: 112 RIKQIACGDSHCLAVTXEGEVQSWGRNQNGQLGLGDTEDS--LVPQKIQA-FEGIRI--- 165
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 403
+ VA G HT DG ++GWG+ YG T P V GE A
Sbjct: 166 ----KXVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKXSXVA 221
Query: 404 GG 405
G
Sbjct: 222 CG 223
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 90/194 (46%), Gaps = 19/194 (9%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPR--RVVALDGIFI 285
K+ +S G HS A+ V +WG G GQLGH GD E P ++ ALDG I
Sbjct: 6 RKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGH-----GDAEDRPSPTQLSALDGHQI 60
Query: 286 KDVACGGVHSCALTSKGA-LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP 344
V CG H+ A + G +Y+WG G+LG G + F+ +P ++ R
Sbjct: 61 VSVTCGADHTVAYSQSGXEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIR-------- 112
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAA 403
++ +ACG SH L +G + WG N GQ + + P + G ++ +AA
Sbjct: 113 --IKQIACGDSHCLAVTXEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKXVAA 170
Query: 404 GGGHSAVLADACSL 417
G H+A + + L
Sbjct: 171 GAEHTAAVTEDGDL 184
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 9/109 (8%)
Query: 3 INEIIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANS 62
I++I G AR + + +Y WG+N GQ G Q + P+ +
Sbjct: 269 ISQISG-GARHTXALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPD--------DQ 319
Query: 63 RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQL 111
+ + ++CG HT AV +F WG GQLG G R P+ ++ L
Sbjct: 320 KVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEAL 368
>gi|442317911|ref|YP_007357932.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441485553|gb|AGC42248.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 1451
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 127/406 (31%), Positives = 184/406 (45%), Gaps = 66/406 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++ WG N GQ GR + P P ++ G + + +A G + + A
Sbjct: 164 LRADGTVWAWGSNFYGQLGRGHSQ-----PGPSPAQVVGL-----TGVVALAAGFDFSLA 213
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V SDGT++ WGAN GQLGDGT R P +V QLQ V +++ G + A+ +D
Sbjct: 214 VRSDGTVWAWGANGSGQLGDGTYIQRLAPTQVSQLQG--VSAVTAGLYHALAL----RSD 267
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQV-SCGSVHVVALSECGLLQ------ 189
GT+ W WG N G +T QV S VA + G L
Sbjct: 268 GTV-----WAWGSNSSGQMGD---GTWTDRPSPVQVTSIARAKAVAAQDAGSLVLLDDGG 319
Query: 190 --AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
AWG N GQLG G T + P ++G L +T ++ G H+ + +G
Sbjct: 320 VFAWGLNSQGQLGIGTTADSPL-PVRVRG----------LGAVTSLAAGTQHAVVLRADG 368
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
++TWG G+ GQLGH S ++ L P V L + VA G HS A S G+++ W
Sbjct: 369 TLWTWGHGATGQLGHG---SSERMLSPEVVTRLSN--VASVASGSFHSVAALSDGSVWTW 423
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGR 365
G + GQLG G T R++P+ V + V + A GH H+ DG
Sbjct: 424 GRNTNGQLGDGTTTE-------------RHLPVRVPGLSGVVSVSASGH-HSFALRSDGT 469
Query: 366 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
+ GWG N+ GQ + + P+ V+ + V+ LA+GG H L
Sbjct: 470 VWGWGRNAQGQMGDGTTKDRASPARVE-GLSSVKALASGGSHMVAL 514
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 119/366 (32%), Positives = 166/366 (45%), Gaps = 62/366 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G P + G A N ++ G ++ AV DGT
Sbjct: 920 VWAWGANGRGQLGDG-----TTTSSASPVRVAGLSAAMN-----VSVGQAYSLAVLPDGT 969
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+++WGAN+ GQLGDGT R P+ V+ L VK+++ GAH A+ +DGT+
Sbjct: 970 VWSWGANDSGQLGDGTNVARTTPKPVQDLAD--VKAVTAGAHHVVAV----RHDGTV--- 1020
Query: 143 RLWVWGQN------QGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECGLLQAW 191
W WG N G++F R F P + + S G H +AL +W
Sbjct: 1021 --WGWGANAFGQVGDGTHFWR-----FRPVRVEGLLNAVETSAGEQHSLALLGDERALSW 1073
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +EYGQLG + L+ P +K L + L VS H+AA+ +G V T
Sbjct: 1074 GSHEYGQLGDAESGPSLE-PVGVK-----LPSSKVLVPAVSVSAWHQHAAALLADGTVQT 1127
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG + GQLG + +S P V L + VA H+ AL S G ++AWG +
Sbjct: 1128 WGGNADGQLGDGTTES---RATPITVAGLGAMVA--VAPAARHTLALRSDGTVWAWGDNT 1182
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWG 370
GQLG G TR R +P+ VV V +A G H+L DG + WG
Sbjct: 1183 FGQLGDGSNTR-------------RTLPVQVVGLEKVTAIAAGSYHSLAVREDGTVWAWG 1229
Query: 371 YNSYGQ 376
YN +GQ
Sbjct: 1230 YNVFGQ 1235
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 131/403 (32%), Positives = 178/403 (44%), Gaps = 60/403 (14%)
Query: 26 WGYNHSGQTGRKGRERQLR-IPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG + GQ G L + +LP PA + S W H+H AA+ +DGT+
Sbjct: 1073 WGSHEYGQLGDAESGPSLEPVGVKLPSSKVLVPAVSVSAW------HQHAAALLADGTVQ 1126
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRL 144
TWG N GQLGDGT E R P V L + + +++ A T A+ +DGT+
Sbjct: 1127 TWGGNADGQLGDGTTESRATPITVAGLGA--MVAVAPAARHTLAL----RSDGTV----- 1175
Query: 145 WVWGQNQGSNFPRLFWGAFTPNTIICQV---------SCGSVHVVALSECGLLQAWGYNE 195
W WG N F +L G+ T T+ QV + GS H +A+ E G + AWGYN
Sbjct: 1176 WAWGDN---TFGQLGDGSNTRRTLPVQVVGLEKVTAIAAGSYHSLAVREDGTVWAWGYNV 1232
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
+GQLG G T + P + G L+ V+ GEYHS + +G ++ G
Sbjct: 1233 FGQLGDG-TMDARAVPTRMLG----------LDGAVAVAGGEYHSLMLRFDGTLWATGNN 1281
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
S GQLG + L P +VV LD ++ V GG HS AL G ++ WG + GQL
Sbjct: 1282 SHGQLGEGTFT---NRLSPFQVVELD--QVRTVRAGGYHSVALREDGTVWTWGHNGQGQL 1336
Query: 316 GLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
G G T P +P L + V G SHT + WG NS+G
Sbjct: 1337 GDGTVTTRRVPAP---------VPGLTA---IASVGAGTSHTFAVGSE--TWAWGRNSHG 1382
Query: 376 QAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSLK 418
Q S+ P+ V G LA G A AD ++
Sbjct: 1383 QLGTGDSSDRLEPTLVKGLHGVKSVLAGGDFSVAQGADGSAMS 1425
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 127/399 (31%), Positives = 172/399 (43%), Gaps = 55/399 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WGYN +GQ G G R P Q+ L G + +A G + A+ +DGT
Sbjct: 520 VWTWGYNGAGQLG-DGTTTDRRAPVQVT-GLSGVTS--------VAAGAYFSLALRTDGT 569
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG GQLGDG R P +V L + VK + AH A +DGT+
Sbjct: 570 VWAWGDGFEGQLGDGAGVQRASPVQVTGL-TRVVKLAAGAAHGLAV-----RDDGTV--- 620
Query: 143 RLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
W WG N GS R T + V G H +AL++ G L+AWG N Y
Sbjct: 621 --WAWGDNTEGQMGDGSWSDRFRAVQVYGLTGVSSVVGGLYHSMALAQDGTLRAWGGNAY 678
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQ G G PRV+ G P L I + H AV E+G + TWG
Sbjct: 679 GQFGDGGVT-----PRVVAG------AVPGLSGIKLLGASYLHVLAVREDGMLLTWGYNR 727
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
GQLG L + LP +V L + ++ G HS + + G + AWG + +GQLG
Sbjct: 728 FGQLG---LGAAGWSSLPVQVRGLG--QGRRLSAGRAHSLLVRADGTVLAWGQNTSGQLG 782
Query: 317 LGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
G T S + RN+P + + G H+LV DG + WG NS GQ
Sbjct: 783 DGSTTHRASPV------LARNLPC------ARAASAGRQHSLVLACDGTVWSWGGNSQGQ 830
Query: 377 AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADAC 415
+ T YP+ V+ G V LA G + AD
Sbjct: 831 LGDGGVTSRAYPAKVEGLWGVVAVLAGGDSSMVLRADGT 869
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 169/396 (42%), Gaps = 60/396 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + ++ WG N SGQ G G Q P Q+ +L G A + G H A
Sbjct: 214 VRSDGTVWAWGANGSGQLG-DGTYIQRLAPTQV-SQLQGVSA--------VTAGLYHALA 263
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ SDGT++ WG+N GQ+GDGT R P +V + A A A+ +
Sbjct: 264 LRSDGTVWAWGSNSSGQMGDGTWTDRPSPVQVTSI-----------ARAKAVAAQDAGSL 312
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQ 189
+ ++ WG N + A +P + + ++ G+ H V L G L
Sbjct: 313 VLLDDGGVFAWGLNSQGQLG-IGTTADSPLPVRVRGLGAVTSLAAGTQHAVVLRADGTLW 371
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
WG+ GQLG G + E + P V+ L + V+ G +HS A +G V
Sbjct: 372 TWGHGATGQLGHG-SSERMLSPEVVT----------RLSNVASVASGSFHSVAALSDGSV 420
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
+TWG + GQLG + + LP RV L G+ V+ G HS AL S G ++ WG
Sbjct: 421 WTWGRNTNGQLGDGTTT---ERHLPVRVPGLSGVV--SVSASGHHSFALRSDGTVWGWGR 475
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHG 368
+ GQ+G + T R P V + V+ +A G SH + DG +
Sbjct: 476 NAQGQMG-------------DGTTKDRASPARVEGLSSVKALASGGSHMVALRTDGTVWT 522
Query: 369 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAG 404
WGYN GQ + +T P V G V +AAG
Sbjct: 523 WGYNGAGQLGDGTTTDRRAPVQVTGLSG-VTSVAAG 557
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 116/416 (27%), Positives = 180/416 (43%), Gaps = 57/416 (13%)
Query: 2 DINEIIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGAN 61
D+ I A + + A ++ WG N++GQ G G P+++P
Sbjct: 100 DVTSIAAGDAHSL-ALRADRTVWTWGGNNAGQVG-DGTNVDRPTPQKVP---------GL 148
Query: 62 SRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC 121
S + +A G H+ A+ +DGT++ WG+N +GQLG G + P +V L V +++
Sbjct: 149 SDVVAVAAGEFHSLALRADGTVWAWGSNFYGQLGRGHSQPGPSPAQVVGLTG--VVALAA 206
Query: 122 GAHCTAAIAEPRENDGTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCG 175
G + A+ +DGT+ W WG N G+ RL + + V+ G
Sbjct: 207 GFDFSLAV----RSDGTV-----WAWGANGSGQLGDGTYIQRLAPTQVSQLQGVSAVTAG 257
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
H +AL G + AWG N GQ+G G + P + + + + V+
Sbjct: 258 LYHALALRSDGTVWAWGSNSSGQMGDGTWTDR---PSPV--------QVTSIARAKAVAA 306
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
+ S + ++G V+ WGL S GQLG + + LP RV L + +A G H+
Sbjct: 307 QDAGSLVLLDDGGVFAWGLNSQGQLG---IGTTADSPLPVRVRGLGAV--TSLAAGTQHA 361
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS 355
L + G L+ WG GQLG G R ++ E T N V VA G
Sbjct: 362 VVLRADGTLWTWGHGATGQLGHGSSER---MLSPEVVTRLSN---------VASVASGSF 409
Query: 356 HTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
H++ + DG + WG N+ GQ + +T P V G V ++A G HS L
Sbjct: 410 HSVAALSDGSVWTWGRNTNGQLGDGTTTERHLPVRVPGLSGVV-SVSASGHHSFAL 464
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 121/405 (29%), Positives = 174/405 (42%), Gaps = 66/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N SGQ G Q + +Q+P + IA G H+ A+ +D T
Sbjct: 69 VWAWGGNGSGQLGTGSVSFQRVVAQQVP---------GLTDVTSIAAGDAHSLALRADRT 119
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++TWG N GQ+GDGT R P+KV L V +++ G + A+ DGT+
Sbjct: 120 VWTWGGNNAGQVGDGTNVDRPTPQKVPGLSD--VVAVAAGEFHSLAL----RADGTV--- 170
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC----------GLLQAWG 192
W WG N + +L G P QV G VVAL+ G + AWG
Sbjct: 171 --WAWGSN---FYGQLGRGHSQPGPSPAQV-VGLTGVVALAAGFDFSLAVRSDGTVWAWG 224
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
N GQLG G + L +V +L+ ++ V+ G YH+ A+ +G V+ W
Sbjct: 225 ANGSGQLGDGTYIQRLAPTQV-----------SQLQGVSAVTAGLYHALALRSDGTVWAW 273
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G S GQ+G + D+ P V K VA S L G ++AWG +
Sbjct: 274 GSNSSGQMGDGTWT--DR---PSPVQVTSIARAKAVAAQDAGSLVLLDDGGVFAWGLNSQ 328
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG-VQLVACGHSHTLVYMRDGRIHGWGY 371
GQLG+G S +P+ V G V +A G H +V DG + WG+
Sbjct: 329 GQLGIGTTADS-------------PLPVRVRGLGAVTSLAAGTQHAVVLRADGTLWTWGH 375
Query: 372 NSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLADAC 415
+ GQ + S P V + V +A+G HS A L+D
Sbjct: 376 GATGQLGHGSSERMLSPEVVT-RLSNVASVASGSFHSVAALSDGS 419
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 118/379 (31%), Positives = 164/379 (43%), Gaps = 62/379 (16%)
Query: 46 PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEE-GRKH 104
P P A A S+ +A G +H+ V GT++ WG N GQLG G+ R
Sbjct: 35 PSHPPAARSQALASATSK---VAAGAQHSLYVTQAGTVWAWGGNGSGQLGTGSVSFQRVV 91
Query: 105 PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQ------GSNFPRL 158
++V L V SI+ G + A+ R +W WG N G+N R
Sbjct: 92 AQQVPGLTD--VTSIAAGDAHSLALRADRT---------VWTWGGNNAGQVGDGTNVDRP 140
Query: 159 FWGAFTPNTI-----ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV 213
TP + + V+ G H +AL G + AWG N YGQLGRG + G +V
Sbjct: 141 -----TPQKVPGLSDVVAVAAGEFHSLALRADGTVWAWGSNFYGQLGRGHSQPGPSPAQV 195
Query: 214 IKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL 273
+ L + ++ G S AV +G V+ WG GQLG + + L
Sbjct: 196 VG-----------LTGVVALAAGFDFSLAVRSDGTVWAWGANGSGQLGDGTYI---QRLA 241
Query: 274 PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDT 333
P +V L G + V G H+ AL S G ++AWG + +GQ+G G T S P + +
Sbjct: 242 PTQVSQLQG--VSAVTAGLYHALALRSDGTVWAWGSNSSGQMGDGTWTDRPS--PVQVTS 297
Query: 334 YFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDW 393
R + VA + +LV + DG + WG NS GQ T A P PV
Sbjct: 298 IAR----------AKAVAAQDAGSLVLLDDGGVFAWGLNSQGQLG--IGTTADSPLPVRV 345
Query: 394 -CVGEVRKLAAGGGHSAVL 411
+G V LAAG H+ VL
Sbjct: 346 RGLGAVTSLAAGTQHAVVL 364
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 156/376 (41%), Gaps = 63/376 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLR--IPKQLPPELFGCPAGANSRWLDIACGHEHT 74
+ A + WG N SGQ G + + + LP C A+ G +H+
Sbjct: 764 VRADGTVLAWGQNTSGQLGDGSTTHRASPVLARNLP-----CARAAS-------AGRQHS 811
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
+A DGT+++WG N GQLGDG R +P KV+ L V ++ G + +
Sbjct: 812 LVLACDGTVWSWGGNSQGQLGDGGVTSRAYPAKVEGLWG--VVAVLAGGDSSMVL----R 865
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWG-AFTPNTI-----ICQVSCGSVHVVALSECGLL 188
DGT+ W WG N G +P + I G H + +S+ G +
Sbjct: 866 ADGTV-----WTWGANGSGQLGDGTLGDRASPLEVKGLAGIATGVMGEAHALVVSQDGTV 920
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
AWG N GQLG G T RV L VS G+ +S AV +G
Sbjct: 921 WAWGANGRGQLGDGTTTSSASPVRVAG-----------LSAAMNVSVGQAYSLAVLPDGT 969
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
V++WG GQLG + + P+ V L +K V G H A+ G ++ WG
Sbjct: 970 VWSWGANDSGQLGDGTNVA---RTTPKPVQDL--ADVKAVTAGAHHVVAVRHDGTVWGWG 1024
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGRI 366
+ GQ+G G ++R P+ V + N V+ + G H+L + D R
Sbjct: 1025 ANAFGQVGDGTH-------------FWRFRPVRVEGLLNAVE-TSAGEQHSLALLGDERA 1070
Query: 367 HGWGYNSYGQAANEKS 382
WG + YGQ + +S
Sbjct: 1071 LSWGSHEYGQLGDAES 1086
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 173/421 (41%), Gaps = 57/421 (13%)
Query: 5 EIIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRW 64
+++G + V + + WGYN GQ G LP ++ G G
Sbjct: 702 KLLGASYLHVLAVREDGMLLTWGYNRFGQLGLGAAGW-----SSLPVQVRGLGQGRR--- 753
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
++ G H+ V +DGT+ WG N GQLGDG+ R P + L ++ S G
Sbjct: 754 --LSAGRAHSLLVRADGTVLAWGQNTSGQLGDGSTTHRASPVLARNL--PCARAASAGRQ 809
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVH 178
+ +A DGT+ W WG N G R + + V G
Sbjct: 810 HSLVLA----CDGTV-----WSWGGNSQGQLGDGGVTSRAYPAKVEGLWGVVAVLAGGDS 860
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
+ L G + WG N GQLG G T P +KG L I GE
Sbjct: 861 SMVLRADGTVWTWGANGSGQLGDG-TLGDRASPLEVKG----------LAGIATGVMGEA 909
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
H+ VS++G V+ WG GQLG + S P RV L +V+ G +S A+
Sbjct: 910 HALVVSQDGTVWAWGANGRGQLGDGTTTSSAS---PVRVAGLSAAM--NVSVGQAYSLAV 964
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 358
G +++WG + +GQLG G N + T + + L V+ V G H +
Sbjct: 965 LPDGTVWSWGANDSGQLGDGT---------NVARTTPKPVQDLA---DVKAVTAGAHHVV 1012
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLADACSL 417
DG + GWG N++GQ + + + P V+ + V + +AG HS A+L D +L
Sbjct: 1013 AVRHDGTVWGWGANAFGQVGDGTHFWRFRPVRVEGLLNAV-ETSAGEQHSLALLGDERAL 1071
Query: 418 K 418
Sbjct: 1072 S 1072
>gi|440895825|gb|ELR47919.1| Putative E3 ubiquitin-protein ligase HERC4 [Bos grunniens mutus]
Length = 1056
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/403 (29%), Positives = 188/403 (46%), Gaps = 52/403 (12%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLLGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
I C+ P++IK Q++ G HS ++ +G ++ WG GQLG
Sbjct: 173 IDCKKQASPQLIKSLLGI--------PFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYPS----PVDWCVGE---VRKLAAGGGHS 408
+N KS + W+P P D+ E V+++ +GG S
Sbjct: 332 TSNRKSPFTVKGNWFPYNGQCPPDFDSEEYFCVKRIFSGGDQS 374
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI +A GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGIDCKKQAS-----PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 125/256 (48%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG G + + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ IA G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GIDCKKQASPQLIKSLLGIP------FMQIAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+++ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|73952751|ref|XP_860006.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
[Canis lupus familiaris]
Length = 1054
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 122/403 (30%), Positives = 187/403 (46%), Gaps = 52/403 (12%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ G WG N+YGQLG G
Sbjct: 115 QLGLLGSEECIRVPRNIKSL--SDIQIVQVACGYYHSLALSKEGEFFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
I C+ P++IK QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 IDCKKQASPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYPS----PVDWCVGE---VRKLAAGGGHS 408
+N KS + W+P P D E V+++ +GG S
Sbjct: 332 TSNRKSPFTVKGNWFPYNGQCPPDIDSEEYFCVKRIFSGGDQS 374
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ GE + WG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKEGEFFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGIDCKKQAS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+G F WG N++GQLG G + + + P+ +K L F++ + GAH
Sbjct: 155 EGEFFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 93/200 (46%), Gaps = 20/200 (10%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+ WG N GQ G G + + + QL L G P ++ +A G H+ + G
Sbjct: 158 FFCWGQNKYGQLGL-GIDCKKQASPQLIKSLLGIP------FMQVAAGGAHSFVLTLSGA 210
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F WG N+FGQLG E R P +K L+++ + I CG TAA+ + +G + T
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTK----EGGVFTF 266
Query: 143 RLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGYNEY 196
+GQ N S+ PR + +I+ Q++CG H A G + ++G
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Query: 197 GQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 325 GQLGTGSTSNR-KSPFTVKG 343
>gi|164448576|ref|NP_001070362.2| probable E3 ubiquitin-protein ligase HERC4 [Bos taurus]
gi|296472143|tpg|DAA14258.1| TPA: hect domain and RLD 4 [Bos taurus]
Length = 1057
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/403 (29%), Positives = 188/403 (46%), Gaps = 52/403 (12%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLLGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
I C+ P++IK Q++ G HS ++ +G ++ WG GQLG
Sbjct: 173 IDCKKQASPQLIKSLLGI--------PFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYPS----PVDWCVGE---VRKLAAGGGHS 408
+N KS + W+P P D+ E V+++ +GG S
Sbjct: 332 TSNRKSPFTVKGNWFPYNGQCPPDFDSEEYFCVKRIFSGGDQS 374
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI +A GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGIDCKKQAS-----PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 125/256 (48%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG G + + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ IA G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GIDCKKQASPQLIKSLLGIP------FMQIAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+++ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A + G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|426255642|ref|XP_004021457.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Ovis aries]
Length = 979
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/403 (29%), Positives = 188/403 (46%), Gaps = 52/403 (12%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----VNKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLLGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
I C+ P++IK Q++ G HS ++ +G ++ WG GQLG
Sbjct: 173 IDCKKQASPQLIKSLLGI--------PFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYPS----PVDWCVGE---VRKLAAGGGHS 408
+N KS + W+P P D+ E V+++ +GG S
Sbjct: 332 TSNRKSPFTVKGNWFPYNGQCPPDFDSEEYFCVKRIFSGGDQS 374
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI +A GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGIDCKKQAS-----PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 125/256 (48%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG G + + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ IA G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GIDCKKQASPQLIKSLLGIP------FMQIAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+++ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A + G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|168008673|ref|XP_001757031.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691902|gb|EDQ78262.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 420
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/370 (32%), Positives = 174/370 (47%), Gaps = 45/370 (12%)
Query: 56 CPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
C G R + ++ G HT A+ S + +WG E GQLG G E R P + L
Sbjct: 8 CSGGPRRRVISVSAGASHTVALLSGDLVCSWGRGEDGQLGHGDAEERHLPLVISALDDCE 67
Query: 116 VKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI--- 168
+ SI+CGA T A +E + T W WG +F RL G F P I
Sbjct: 68 ISSITCGADHTTARSE------STRTVYSWGWG-----DFGRLGHGNSSDLFIPRAIKGL 116
Query: 169 ----ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
I Q++CG H +A++ G + +WG N+ GQLG G T + L +V A
Sbjct: 117 KGLEIKQIACGDSHCLAITGDGEVHSWGRNQNGQLGLGHTEDVLVPNKV---------AA 167
Query: 225 PELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF 284
E + ++ G H+AAV+E+G++Y WG G G LG L + L+P V A+ G
Sbjct: 168 FEGIAVKMLAAGAEHTAAVTESGKLYGWGWGRYGNLG---LGDRNDRLVPGEVAAVPGEK 224
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP 344
+ VACG H+ A+ + G LY +G S+ GQLG G L+P++ +N I
Sbjct: 225 MNLVACGWRHTIAVANSGNLYTFGWSKYGQLGHGDFED--HLVPHQVQA-LKNKTI---- 277
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAA 403
Q V+ G HT+ DG ++GWG+N +GQ + P + V E V ++
Sbjct: 278 ---QAVSGGWRHTVALDEDGELYGWGWNKFGQVGCGNTDDHNSPKLITGIVNEKVTRVTC 334
Query: 404 GGGHSAVLAD 413
G H+ + D
Sbjct: 335 GWRHTVAITD 344
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 161/362 (44%), Gaps = 52/362 (14%)
Query: 26 WGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA-SDGTL 83
WG GQ G ER L + + L C + I CG +HT A + S T+
Sbjct: 38 WGRGEDGQLGHGDAEERHLPL---VISALDDCEISS------ITCGADHTTARSESTRTV 88
Query: 84 FTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGTISTS 142
++WG +FG+LG G P +K L+ +K I+CG +HC A DG + +
Sbjct: 89 YSWGWGDFGRLGHGNSSDLFIPRAIKGLKGLEIKQIACGDSHCLAITG-----DGEVHS- 142
Query: 143 RLWVWGQNQGSNFPRLFW-GAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
WG+NQ PN + + ++ G+ H A++E G L WG+
Sbjct: 143 ----WGRNQNGQLGLGHTEDVLVPNKVAAFEGIAVKMLAAGAEHTAAVTESGKLYGWGWG 198
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
YG LG G + R++ G A EK+ V+CG H+ AV+ +G +YT+G
Sbjct: 199 RYGNLGLGD-----RNDRLVPGEVA----AVPGEKMNLVACGWRHTIAVANSGNLYTFGW 249
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLGH + L+P +V AL I+ V+ G H+ AL G LY WG ++ GQ
Sbjct: 250 SKYGQLGHGDFED---HLVPHQVQALKNKTIQAVSGGWRHTVALDEDGELYGWGWNKFGQ 306
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
+G G N D + +V V V CG HT+ G ++ WG +
Sbjct: 307 VGCG----------NTDDHNSPKLITGIVNEKVTRVTCGWRHTVAITDRGNVYSWGRGTS 356
Query: 375 GQ 376
GQ
Sbjct: 357 GQ 358
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 101/314 (32%), Positives = 148/314 (47%), Gaps = 37/314 (11%)
Query: 15 DNIPAKS----AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACG 70
D+ A+S +Y WG+ G+ G G L IP+ + L G IACG
Sbjct: 76 DHTTARSESTRTVYSWGWGDFGRLGH-GNSSDLFIPRAIKG-LKGLEI------KQIACG 127
Query: 71 HEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIA 130
H A+ DG + +WG N+ GQLG G E P KV + VK ++ GA TAA+
Sbjct: 128 DSHCLAITGDGEVHSWGRNQNGQLGLGHTEDVLVPNKVAAFEGIAVKMLAAGAEHTAAVT 187
Query: 131 EPRENDGTISTSRLWVWGQ----NQGSNFPRLFWG--AFTPNTIICQVSCGSVHVVALSE 184
E + G W WG+ G RL G A P + V+CG H +A++
Sbjct: 188 ESGKLYG-------WGWGRYGNLGLGDRNDRLVPGEVAAVPGEKMNLVACGWRHTIAVAN 240
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G L +G+++YGQLG G + L +V +A + + I VS G H+ A+
Sbjct: 241 SGNLYTFGWSKYGQLGHGDFEDHLVPHQV---------QALKNKTIQAVSGGWRHTVALD 291
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
E+GE+Y WG GQ+G + D P+ + + + V CG H+ A+T +G +
Sbjct: 292 EDGELYGWGWNKFGQVG---CGNTDDHNSPKLITGIVNEKVTRVTCGWRHTVAITDRGNV 348
Query: 305 YAWGGSQAGQLGLG 318
Y+WG +GQLG G
Sbjct: 349 YSWGRGTSGQLGHG 362
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 148/326 (45%), Gaps = 49/326 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I ++ WG N +GQ G G + +P ++ G +A G EHTAA
Sbjct: 134 ITGDGEVHSWGRNQNGQLGL-GHTEDVLVPNKVAA-FEGIAVKM------LAAGAEHTAA 185
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V G L+ WG +G LG G R P +V + E + ++CG T A+A N
Sbjct: 186 VTESGKLYGWGWGRYGNLGLGDRNDRLVPGEVAAVPGEKMNLVACGWRHTIAVA----NS 241
Query: 137 GTISTSRLWVWGQNQGSNF-----PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
G + T +GQ +F P N I VS G H VAL E G L W
Sbjct: 242 GNLYTFGWSKYGQLGHGDFEDHLVPHQV--QALKNKTIQAVSGGWRHTVALDEDGELYGW 299
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G+N++GQ+G G T + P++I G EK+T+V+CG H+ A+++ G VY+
Sbjct: 300 GWNKFGQVGCGNT-DDHNSPKLITGIVN--------EKVTRVTCGWRHTVAITDRGNVYS 350
Query: 252 WGLGSVGQLGHCSLQSGD--KELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
WG G+ GQLGH GD +P+R+ L +AC G+ S G
Sbjct: 351 WGRGTSGQLGH-----GDAVDRCVPKRIELLSA---DGLACQGIESSP----------SG 392
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYF 335
+ A + P R ++++P+E+ F
Sbjct: 393 NCASSNWISPAER-YAVVPDETIGSF 417
>gi|444914429|ref|ZP_21234572.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444714661|gb|ELW55540.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 648
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 128/400 (32%), Positives = 180/400 (45%), Gaps = 72/400 (18%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLD----IACGHEHTAAVA 78
++ WG N GQ G G L ++ RWL +A G H+ AV
Sbjct: 270 LWAWGSNDHGQRG-DGSTVYLSSSVRV-------------RWLSGVVAMAAGSAHSLAVR 315
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
SDGTL+ WGAN +GQLGDGT + P++V+ L S V + H A A DGT
Sbjct: 316 SDGTLWAWGANYYGQLGDGTRKDHDTPKRVQGL-SRVVAVAAGDGHSIALCA-----DGT 369
Query: 139 ISTSRLWVWGQNQGSNFPRLFWGAFTPNTI---------ICQVSCGSVHVVALSECGLLQ 189
+ W WG N G+ + + + V+ G++H +A+ G +
Sbjct: 370 V-----WTWGYNHDGQLAH---GSTNDSPVPLHVRELSGVVAVAAGALHSLAVLSDGSVW 421
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
AWGYN GQLG G + P ++G L + VS G HS A +G V
Sbjct: 422 AWGYNRQGQLGDGSLSSSAE-PVRVQG----------LSGVAAVSAGLNHSLARGTDGGV 470
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
+ WG S GQLG + L+P RV L G ++ ++ G HS A S G L+AWGG
Sbjct: 471 WAWGGNSFGQLGEGTTS---NALVPVRVRGLSG--VETISAGFNHSLARASDGGLWAWGG 525
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHG 368
+ GQLG G + S ++P+ V +GV V G +H+L DG +
Sbjct: 526 NYTGQLGDGTTSNS-------------SVPVRVQGLSGVAAVFAGLNHSLAVRTDGSVWA 572
Query: 369 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
WG NS+GQ + ++ P V G + +AAG HS
Sbjct: 573 WGINSFGQLGEGTTNTSFAPVRVQGLSG-METVAAGSLHS 611
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 128/422 (30%), Positives = 197/422 (46%), Gaps = 70/422 (16%)
Query: 2 DINEIIGETARPVDNIPAKS--AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
D++E++ A ++ ++ ++ WG N +GQ G +PKQ+ L G A
Sbjct: 145 DLSEVVAVAAGGNHSLAVRADGTVWAWGDNFAGQLGDGNILTTRWLPKQV-QGLSGVVA- 202
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKH-PEKVKQLQSEFVKS 118
+ G H+ SDG+++ WG N GQLG+G G PE+V+ L+ V +
Sbjct: 203 -------ASAGWAHSMVALSDGSVWAWGNNTSGQLGNGISVGYGALPEQVQGLRG--VMA 253
Query: 119 ISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQG-----------SNFPRLFWGAFTPNT 167
++ G + A+ +DGT LW WG N S+ R+ W +
Sbjct: 254 VAAGGLYSLAL----RSDGT-----LWAWGSNDHGQRGDGSTVYLSSSVRVRW-----LS 299
Query: 168 IICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL 227
+ ++ GS H +A+ G L AWG N YGQLG G T + P+ ++G L
Sbjct: 300 GVVAMAAGSAHSLAVRSDGTLWAWGANYYGQLGDG-TRKDHDTPKRVQG----------L 348
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
++ V+ G+ HS A+ +G V+TWG GQL H S + +P V L G+
Sbjct: 349 SRVVAVAAGDGHSIALCADGTVWTWGYNHDGQLAHGST---NDSPVPLHVRELSGVVA-- 403
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NG 346
VA G +HS A+ S G+++AWG ++ GQLG G + S P+ V +G
Sbjct: 404 VAAGALHSLAVLSDGSVWAWGYNRQGQLGDGSLSSSAE-------------PVRVQGLSG 450
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGG 406
V V+ G +H+L DG + WG NS+GQ ++ A P V G V ++AG
Sbjct: 451 VAAVSAGLNHSLARGTDGGVWAWGGNSFGQLGEGTTSNALVPVRVRGLSG-VETISAGFN 509
Query: 407 HS 408
HS
Sbjct: 510 HS 511
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 120/379 (31%), Positives = 172/379 (45%), Gaps = 60/379 (15%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+++ WG N SGQ G +P+Q+ L G A +A G ++ A+ SDG
Sbjct: 218 SVWAWGNNTSGQLGNGISVGYGALPEQVQ-GLRGVMA--------VAAGGLYSLALRSDG 268
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
TL+ WG+N+ GQ GDG+ +V+ L S V + AH A +DGT
Sbjct: 269 TLWAWGSNDHGQRGDGSTVYLSSSVRVRWL-SGVVAMAAGSAHSLAV-----RSDGT--- 319
Query: 142 SRLWVWGQNQGSNFPRLFWGAF----TPNTI-----ICQVSCGSVHVVALSECGLLQAWG 192
LW WG N + +L G TP + + V+ G H +AL G + WG
Sbjct: 320 --LWAWGANY---YGQLGDGTRKDHDTPKRVQGLSRVVAVAAGDGHSIALCADGTVWTWG 374
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
YN GQL G T + + EL + V+ G HS AV +G V+ W
Sbjct: 375 YNHDGQLAHGSTND-----------SPVPLHVRELSGVVAVAAGALHSLAVLSDGSVWAW 423
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G GQLG SL S + P RV L G+ V+ G HS A + G ++AWGG+
Sbjct: 424 GYNRQGQLGDGSLSSSAE---PVRVQGLSGV--AAVSAGLNHSLARGTDGGVWAWGGNSF 478
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYN 372
GQLG G T S +L+P R + +GV+ ++ G +H+L DG + WG N
Sbjct: 479 GQLGEG--TTSNALVP----VRVRGL------SGVETISAGFNHSLARASDGGLWAWGGN 526
Query: 373 SYGQAANEKSTYAWYPSPV 391
GQ + ++ + P V
Sbjct: 527 YTGQLGDGTTSNSSVPVRV 545
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/329 (32%), Positives = 153/329 (46%), Gaps = 57/329 (17%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A ++ WGYNH GQ G +P + EL G A +A G H+ AV
Sbjct: 366 ADGTVWTWGYNHDGQL-AHGSTNDSPVPLHVR-ELSGVVA--------VAAGALHSLAVL 415
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
SDG+++ WG N GQLGDG+ P +V+ L V ++S G + + A R DG
Sbjct: 416 SDGSVWAWGYNRQGQLGDGSLSSSAEPVRVQGLSG--VAAVSAGLNHSLA----RGTDGG 469
Query: 139 ISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-----ICQVSCGSVHVVALSECGLLQ 189
+ W WG G++F +L G A P + + +S G H +A + G L
Sbjct: 470 V-----WAWG---GNSFGQLGEGTTSNALVPVRVRGLSGVETISAGFNHSLARASDGGLW 521
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
AWG N GQLG G T P ++G L + V G HS AV +G V
Sbjct: 522 AWGGNYTGQLGDGTTSNSSV-PVRVQG----------LSGVAAVFAGLNHSLAVRTDGSV 570
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
+ WG+ S GQLG + + P RV L G+ + VA G +HS ++ S G++++WG
Sbjct: 571 WAWGINSFGQLGEGTT---NTSFAPVRVQGLSGM--ETVAAGSLHSLSVGSDGSMWSWGN 625
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
+ GQLG G +P S T R++
Sbjct: 626 NHHGQLGHG--------LPGRSPTPVRSL 646
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/359 (29%), Positives = 160/359 (44%), Gaps = 50/359 (13%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+A G +H+ A+ DGT++ WG N GQLGDG+ + P +V+ L V ++S G +
Sbjct: 1 MAAGTDHSLALRHDGTVWAWGGNALGQLGDGSSDSHSEPVRVRGLSG--VVAVSAGEGHS 58
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI---------ICQVSCGSV 177
A+ DGT+ W WG N +L G ++ + VS G
Sbjct: 59 LAL----HRDGTV-----WAWGDNA---LGQLGDGTSDSHSEPVRVPGLSGVVAVSAGDN 106
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H +AL G + AWG N QLG + P ++ +L ++ V+ G
Sbjct: 107 HSLALRSDGSVWAWGDNNSDQLGGAPGAQSYSVPWRLE----------DLSEVVAVAAGG 156
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
HS AV +G V+ WG GQLG ++ + LP++V L G+ + G HS
Sbjct: 157 NHSLAVRADGTVWAWGDNFAGQLGDGNILT--TRWLPKQVQGLSGVVAA--SAGWAHSMV 212
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT 357
S G+++AWG + +GQLG G + +P + GV VA G ++
Sbjct: 213 ALSDGSVWAWGNNTSGQLGNGISV-GYGALPEQVQGL----------RGVMAVAAGGLYS 261
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLADAC 415
L DG + WG N +GQ + + Y V W G V +AAG HS AV +D
Sbjct: 262 LALRSDGTLWAWGSNDHGQRGDGSTVYLSSSVRVRWLSGVV-AMAAGSAHSLAVRSDGT 319
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 126/406 (31%), Positives = 173/406 (42%), Gaps = 66/406 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G G P ++P L G A ++ G H+ A+ SDG+
Sbjct: 67 VWAWGDNALGQLG-DGTSDSHSEPVRVP-GLSGVVA--------VSAGDNHSLALRSDGS 116
Query: 83 LFTWGANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
++ WG N QLG + P +++ L SE V + G H A A DGT+
Sbjct: 117 VWAWGDNNSDQLGGAPGAQSYSVPWRLEDL-SEVVAVAAGGNHSLAVRA-----DGTV-- 168
Query: 142 SRLWVWGQNQGSNFP--RLFWGAFTPNTI-----ICQVSCGSVH-VVALSECGLLQAWGY 193
W WG N + + P + + S G H +VALS+ G + AWG
Sbjct: 169 ---WAWGDNFAGQLGDGNILTTRWLPKQVQGLSGVVAASAGWAHSMVALSD-GSVWAWGN 224
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
N GQLG GI+ GY ++ L + V+ G +S A+ +G ++ WG
Sbjct: 225 NTSGQLGNGISV----------GYGALPEQVQGLRGVMAVAAGGLYSLALRSDGTLWAWG 274
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
GQ G S + RV L G+ +A G HS A+ S G L+AWG + G
Sbjct: 275 SNDHGQRGDGSTVYLSSSV---RVRWLSGVVA--MAAGSAHSLAVRSDGTLWAWGANYYG 329
Query: 314 QLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNS 373
QLG G TR P R V VA G H++ DG + WGYN
Sbjct: 330 QLGDG--TRKDHDTPKRVQGLSR----------VVAVAAGDGHSIALCADGTVWTWGYNH 377
Query: 374 YGQAANEKSTYAWYPSPVDWCVGE---VRKLAAGGGHS-AVLADAC 415
GQ A+ + SPV V E V +AAG HS AVL+D
Sbjct: 378 DGQLAHGSTN----DSPVPLHVRELSGVVAVAAGALHSLAVLSDGS 419
>gi|219847607|ref|YP_002462040.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
9485]
gi|219541866|gb|ACL23604.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
DSM 9485]
Length = 776
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 125/404 (30%), Positives = 179/404 (44%), Gaps = 67/404 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G + P + G P+G + IA G HT A S G
Sbjct: 125 VWCWGSNFYGQLGDGSYTT-----RSTPVAVSGLPSGVTA----IAAGGWHTCARTSSGG 175
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG N GQLGDGT R P V L SE + AH A +S+
Sbjct: 176 VWCWGGNYRGQLGDGTTTDRSTPVAVSGLPSEVTAIAAGDAHTCA----------RMSSG 225
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTI----------ICQVSCGSVHVVALSECGLLQAWG 192
+W WG N N+ +L G++T ++ + ++ G VH AL+ G ++ WG
Sbjct: 226 EVWCWGGN---NYGQLGDGSYTDSSTPVAVSGLPSGVTAIAAGGVHTCALTGSGGVRCWG 282
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
N GQLG G+T G P + G +T ++ G+YH+ A++ +G V+ W
Sbjct: 283 ANYSGQLGNGLT-FGRSTPGAVSGLP---------SGVTAIAAGDYHTCALTGSGGVWCW 332
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRV-VALDGI--FIKDVACGGVHSCALTSKGALYAWGG 309
G G+ S Q GD R VA+ G+ ++ +A G H+CAL S G + WG
Sbjct: 333 G-------GNYSGQLGDGTTTARSTPVAVSGLPSGVETIAAGDYHTCALMSSGGVRCWGH 385
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGRIH 367
+ GQLG G T R+ P+ V +P+GV +A G HT G +
Sbjct: 386 NDRGQLGDGTTTA-------------RSTPVAVSGLPSGVTAIAAGRLHTCARTSSGGVW 432
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
WG NS GQ + T + P V V +AAGG H+ L
Sbjct: 433 CWGDNSDGQLGDGSFTDSSTPVAVSGLASGVETIAAGGWHTCAL 476
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 120/402 (29%), Positives = 176/402 (43%), Gaps = 65/402 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + WG N+SGQ G L + P + G P+G + IA G HT A
Sbjct: 272 LTGSGGVRCWGANYSGQLGNG-----LTFGRSTPGAVSGLPSGVTA----IAAGDYHTCA 322
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ G ++ WG N GQLGDGT R P V L S V++I+ G + T A+
Sbjct: 323 LTGSGGVWCWGGNYSGQLGDGTTTARSTPVAVSGLPSG-VETIAAGDYHTCAL------- 374
Query: 137 GTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTI------ICQVSCGSVHVVALSE 184
+S+ + WG N G+ R TP + + ++ G +H A +
Sbjct: 375 --MSSGGVRCWGHNDRGQLGDGTTTAR-----STPVAVSGLPSGVTAIAAGRLHTCARTS 427
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G + WG N GQLG G + P + G A ++ ++ G +H+ A++
Sbjct: 428 SGGVWCWGDNSDGQLGDGSFTDSST-PVAVSGLASGVET---------IAAGGWHTCALT 477
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
+G V+ WG + GQLG S + P V L + +A GGVH+CALT G +
Sbjct: 478 GSGGVWCWGRNNSGQLGDGSTI---YHITPVAVSGLP-SGVTAIAAGGVHTCALTGSGGV 533
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMR 362
+ WGG+ AGQLG G T R+ P+ V +P+GV +A G HT
Sbjct: 534 WCWGGNFAGQLGDGTTTD-------------RSTPVAVSGLPSGVTAIAAGDIHTCALTG 580
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAG 404
G + WG N +GQ + +T P V V +AAG
Sbjct: 581 SGGVWCWGGNDFGQLGDGTTTNRSTPVAVSGLPSGVTAIAAG 622
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 128/447 (28%), Positives = 182/447 (40%), Gaps = 91/447 (20%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ ++ WG N+SGQ G + P + G P+G + IA G HT A
Sbjct: 323 LTGSGGVWCWGGNYSGQLGDG-----TTTARSTPVAVSGLPSGVET----IAAGDYHTCA 373
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ S G + WG N+ GQLGDGT R P V L S V +I+ G T A R +
Sbjct: 374 LMSSGGVRCWGHNDRGQLGDGTTTARSTPVAVSGLPSG-VTAIAAGRLHTCA----RTSS 428
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVS----------CGSVHVVALSECG 186
G + W WG N G+FT ++ VS G H AL+ G
Sbjct: 429 GGV-----WCWGDNSDGQLGD---GSFTDSSTPVAVSGLASGVETIAAGGWHTCALTGSG 480
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ WG N GQLG G T + P + G +T ++ G H+ A++ +
Sbjct: 481 GVWCWGRNNSGQLGDGSTIYHIT-PVAVSGLP---------SGVTAIAAGGVHTCALTGS 530
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGI--FIKDVACGGVHSCALTSKGA 303
G V+ WG GQLG D R VA+ G+ + +A G +H+CALT G
Sbjct: 531 GGVWCWGGNFAGQLG-------DGTTTDRSTPVAVSGLPSGVTAIAAGDIHTCALTGSGG 583
Query: 304 LYAWGGSQAGQLGLGPQTR-----SFSLIPN----------------------------- 329
++ WGG+ GQLG G T + S +P+
Sbjct: 584 VWCWGGNDFGQLGDGTTTNRSTPVAVSGLPSGVTAIAAGLRYTCALTGSGGVWCWGYNLS 643
Query: 330 ---ESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTY 384
+ T R+ P+ V +P+GV +A G +T G + WG N GQ + +T
Sbjct: 644 GQLDDGTTSRSTPVAVSGLPSGVTAIAAGGWYTCARTSSGGVRCWGANGSGQLGDGTTTK 703
Query: 385 AWYPSPVDWCVGEVRKLAAGGGHSAVL 411
P V V +AAGG H+ L
Sbjct: 704 RSTPVAVSGLPSGVTAIAAGGEHTCAL 730
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/366 (29%), Positives = 158/366 (43%), Gaps = 56/366 (15%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
IA G HT A S G ++ WG N+FG+LGDG+ P V L S + GAH
Sbjct: 58 IAAGGGHTCARTSSGGVWCWGGNDFGRLGDGSYTDSSTPVAVSGLPSGVTAIAAGGAHTC 117
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI----------ICQVSCGS 176
A S+ +W WG N + +L G++T + + ++ G
Sbjct: 118 A----------LTSSGEVWCWGSNF---YGQLGDGSYTTRSTPVAVSGLPSGVTAIAAGG 164
Query: 177 VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG 236
H A + G + WG N GQLG G T + P + G ++T ++ G
Sbjct: 165 WHTCARTSSGGVWCWGGNYRGQLGDGTTTD-RSTPVAVSGLP---------SEVTAIAAG 214
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI--FIKDVACGGVH 294
+ H+ A +GEV+ WG + GQLG S VA+ G+ + +A GGVH
Sbjct: 215 DAHTCARMSSGEVWCWGGNNYGQLGDGSYTDSSTP------VAVSGLPSGVTAIAAGGVH 268
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLVAC 352
+CALT G + WG + +GQLG G T+ R+ P V +P+GV +A
Sbjct: 269 TCALTGSGGVRCWGANYSGQLGNGL-------------TFGRSTPGAVSGLPSGVTAIAA 315
Query: 353 GHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
G HT G + WG N GQ + +T P V V +AAG H+ L
Sbjct: 316 GDYHTCALTGSGGVWCWGGNYSGQLGDGTTTARSTPVAVSGLPSGVETIAAGDYHTCALM 375
Query: 413 DACSLK 418
+ ++
Sbjct: 376 SSGGVR 381
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 118/428 (27%), Positives = 178/428 (41%), Gaps = 93/428 (21%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + + WG+N GQ G + P + G P+G + IA G HT A
Sbjct: 374 LMSSGGVRCWGHNDRGQLGDG-----TTTARSTPVAVSGLPSGVTA----IAAGRLHTCA 424
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
S G ++ WG N GQLGDG+ P V L S V++I+ G T A+
Sbjct: 425 RTSSGGVWCWGDNSDGQLGDGSFTDSSTPVAVSGLASG-VETIAAGGWHTCAL------- 476
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGA----FTPNTI------ICQVSCGSVHVVALSECG 186
+ +W WG+N N +L G+ TP + + ++ G VH AL+ G
Sbjct: 477 --TGSGGVWCWGRN---NSGQLGDGSTIYHITPVAVSGLPSGVTAIAAGGVHTCALTGSG 531
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ WG N GQLG G T + P + G +T ++ G+ H+ A++ +
Sbjct: 532 GVWCWGGNFAGQLGDGTTTD-RSTPVAVSGLP---------SGVTAIAAGDIHTCALTGS 581
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGI--FIKDVACGGVHSCALTSKGA 303
G V+ WG GQLG D R VA+ G+ + +A G ++CALT G
Sbjct: 582 GGVWCWGGNDFGQLG-------DGTTTNRSTPVAVSGLPSGVTAIAAGLRYTCALTGSGG 634
Query: 304 LYAWGGSQAGQLGLGPQTRS----FSLIPN------------------------------ 329
++ WG + +GQL G +RS S +P+
Sbjct: 635 VWCWGYNLSGQLDDGTTSRSTPVAVSGLPSGVTAIAAGGWYTCARTSSGGVRCWGANGSG 694
Query: 330 ---ESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTY 384
+ T R+ P+ V +P+GV +A G HT M G + WG N GQ + + Y
Sbjct: 695 QLGDGTTTKRSTPVAVSGLPSGVTAIAAGGEHTCALMSSGGVWCWGRNDSGQLGDGRPLY 754
Query: 385 AWYPSPVD 392
+PVD
Sbjct: 755 --RTTPVD 760
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 146/337 (43%), Gaps = 48/337 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ ++ WG N+SGQ G + P + G P+G + IA G HT A
Sbjct: 476 LTGSGGVWCWGRNNSGQLGDGSTIYHIT-----PVAVSGLPSGVTA----IAAGGVHTCA 526
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ G ++ WG N GQLGDGT R P V L S V +I+ G T A+
Sbjct: 527 LTGSGGVWCWGGNFAGQLGDGTTTDRSTPVAVSGLPSG-VTAIAAGDIHTCAL------- 578
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI----------ICQVSCGSVHVVALSECG 186
+ +W WG N +F +L G T + + ++ G + AL+ G
Sbjct: 579 --TGSGGVWCWGGN---DFGQLGDGTTTNRSTPVAVSGLPSGVTAIAAGLRYTCALTGSG 633
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ WGYN GQL G T P + G +T ++ G +++ A + +
Sbjct: 634 GVWCWGYNLSGQLDDGTTSRST--PVAVSGLP---------SGVTAIAAGGWYTCARTSS 682
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
G V WG GQLG + K P V L + +A GG H+CAL S G ++
Sbjct: 683 GGVRCWGANGSGQLGDGTTT---KRSTPVAVSGLP-SGVTAIAAGGEHTCALMSSGGVWC 738
Query: 307 WGGSQAGQLGLG-PQTRSFSLIPNESDTYFRNIPILV 342
WG + +GQLG G P R+ + S ++ +P++V
Sbjct: 739 WGRNDSGQLGDGRPLYRTTPVDVVTSASWGVYLPMIV 775
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 123/267 (46%), Gaps = 35/267 (13%)
Query: 157 RLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKG 216
RL +F+P + ++ G H A + G + WG N++G+LG G + P + G
Sbjct: 43 RLHTSSFSPLQGVTAIAAGGGHTCARTSSGGVWCWGGNDFGRLGDGSYTDSST-PVAVSG 101
Query: 217 YAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRR 276
+T ++ G H+ A++ +GEV+ WG GQL GD R
Sbjct: 102 LP---------SGVTAIAAGGAHTCALTSSGEVWCWGSNFYGQL-------GDGSYTTRS 145
Query: 277 V-VALDGI--FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDT 333
VA+ G+ + +A GG H+CA TS G ++ WGG+ GQLG G T
Sbjct: 146 TPVAVSGLPSGVTAIAAGGWHTCARTSSGGVWCWGGNYRGQLGDGTTTD----------- 194
Query: 334 YFRNIPILV--VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
R+ P+ V +P+ V +A G +HT M G + WG N+YGQ + T + P V
Sbjct: 195 --RSTPVAVSGLPSEVTAIAAGDAHTCARMSSGEVWCWGGNNYGQLGDGSYTDSSTPVAV 252
Query: 392 DWCVGEVRKLAAGGGHSAVLADACSLK 418
V +AAGG H+ L + ++
Sbjct: 253 SGLPSGVTAIAAGGVHTCALTGSGGVR 279
>gi|255638076|gb|ACU19352.1| unknown [Glycine max]
Length = 440
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 161/327 (49%), Gaps = 44/327 (13%)
Query: 62 SRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC 121
SR L I+ G HT A+ S + +WG E GQLG G + R P + L ++ + SI+C
Sbjct: 13 SRVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIAC 72
Query: 122 GAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTIIC------- 170
GA T A +E R + L+ WG +F RL G P II
Sbjct: 73 GADHTLAYSESR--------NELYSWGWG---DFGRLGHGNSSDLLIPQPIIALQGLRIK 121
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
Q++CG H +A++ G +Q+WG N+ GQLG G + + L P+ I+ + I
Sbjct: 122 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTSEDSLV-PQKIQTFQGV--------PI 172
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
V+ G HS A++ENGE+Y WG G G LG L + +P +V ++D + VAC
Sbjct: 173 KMVAAGAEHSVAITENGELYGWGWGRYGNLG---LGDRNDRWIPEKVSSVDCDKMVMVAC 229
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
G H+ +++S G LY +G S+ GQLG G SL+P + + + V
Sbjct: 230 GWRHTISVSSLGGLYTYGWSKYGQLGHG--NFEDSLVPQKLQALSDKL--------ISQV 279
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+ G H++ G ++GWG+N +GQ
Sbjct: 280 SGGWRHSMALTSTGLLYGWGWNKFGQV 306
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 115/365 (31%), Positives = 170/365 (46%), Gaps = 58/365 (15%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLD-IACGHEHTAAVA-SDGTL 83
WG GQ G + +L LP L + +++ +D IACG +HT A + S L
Sbjct: 37 WGRGEDGQLGHGDTDDRL-----LPTHL----SALDAQQIDSIACGADHTLAYSESRNEL 87
Query: 84 FTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGTISTS 142
++WG +FG+LG G P+ + LQ +K I+CG +HC A E G + +
Sbjct: 88 YSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTME-----GEVQS- 141
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
WG+NQ + P I I V+ G+ H VA++E G L WG+
Sbjct: 142 ----WGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWG 197
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
YG LG G + R I +D +K+ V+CG H+ +VS G +YT+G
Sbjct: 198 RYGNLGLGD-----RNDRWIPEKVSSVD----CDKMVMVACGWRHTISVSSLGGLYTYGW 248
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLGH + + L+P+++ AL I V+ G HS ALTS G LY WG ++ GQ
Sbjct: 249 SKYGQLGHGNFE---DSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQ 305
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQLV--ACGHSHTLVYMRDGRIHGWGY 371
+G+G D R P+ V P+ ++V +CG HT+ + WG
Sbjct: 306 VGVG-------------DNVDRCSPVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGR 352
Query: 372 NSYGQ 376
+ GQ
Sbjct: 353 GTNGQ 357
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 125/231 (54%), Gaps = 23/231 (9%)
Query: 162 AFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFL 221
A +P + + +S G+ H VAL ++ +WG E GQLG G T + R++ + L
Sbjct: 8 ATSPPSRVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDD-----RLLPTHLSAL 62
Query: 222 DEAPELEKITQVSCGEYHSAAVSEN-GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL 280
D ++I ++CG H+ A SE+ E+Y+WG G G+LGH + L+P+ ++AL
Sbjct: 63 DA----QQIDSIACGADHTLAYSESRNELYSWGWGDFGRLGHGN---SSDLLIPQPIIAL 115
Query: 281 DGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI 340
G+ IK +ACG H A+T +G + +WG +Q GQLGLG T SL+P + T F+ +PI
Sbjct: 116 QGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLG--TSEDSLVPQKIQT-FQGVPI 172
Query: 341 LVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
++VA G H++ +G ++GWG+ YG W P V
Sbjct: 173 -------KMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKV 216
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 152/330 (46%), Gaps = 46/330 (13%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
+++ +Y WG+ G+ G G L IP+ + A R IACG H AV
Sbjct: 83 SRNELYSWGWGDFGRLGH-GNSSDLLIPQPII-------ALQGLRIKQIACGDSHCLAVT 134
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
+G + +WG N+ GQLG GT E P+K++ Q +K ++ GA + AI E E G
Sbjct: 135 MEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYG- 193
Query: 139 ISTSRLWVWGQ--NQGSNFPRLFWGAFTPNTIIC----QVSCGSVHVVALSECGLLQAWG 192
W WG+ N G W +++ C V+CG H +++S G L +G
Sbjct: 194 ------WGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYG 247
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
+++YGQLG G + L P+ ++ + L I+QVS G HS A++ G +Y W
Sbjct: 248 WSKYGQLGHGNFEDSLV-PQKLQALSDKL--------ISQVSGGWRHSMALTSTGLLYGW 298
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G GQ+G + P +V + ++CG H+ A+T K +++WG
Sbjct: 299 GWNKFGQVG---VGDNVDRCSPVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTN 355
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
GQLG G DT RN P ++
Sbjct: 356 GQLGHG-------------DTVDRNSPKII 372
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 86/191 (45%), Gaps = 15/191 (7%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
++ +S G H+ A+ V +WG G GQLGH D LLP + ALD I +
Sbjct: 14 RVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDT---DDRLLPTHLSALDAQQIDSI 70
Query: 289 ACGGVHSCALT-SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
ACG H+ A + S+ LY+WG G+LG G N SD I + +
Sbjct: 71 ACGADHTLAYSESRNELYSWGWGDFGRLGHG----------NSSDLLIPQPIIALQGLRI 120
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGG 406
+ +ACG SH L +G + WG N GQ S + P + G ++ +AAG
Sbjct: 121 KQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAE 180
Query: 407 HSAVLADACSL 417
HS + + L
Sbjct: 181 HSVAITENGEL 191
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 10/90 (11%)
Query: 23 IYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG+N GQ G +R + + P + + + I+CG HT AV
Sbjct: 295 LYGWGWNKFGQVGVGDNVDRCSPVQVKFP---------HDQKVVQISCGWRHTIAVTEKE 345
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQL 111
+F+WG GQLG G R P+ ++ L
Sbjct: 346 NVFSWGRGTNGQLGHGDTVDRNSPKIIEAL 375
>gi|417405688|gb|JAA49548.1| Putative e3 ubiquitin-protein ligase herc4 [Desmodus rotundus]
Length = 1049
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 123/403 (30%), Positives = 189/403 (46%), Gaps = 52/403 (12%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + +WG N+YGQLG G
Sbjct: 115 QLGLLGSEECIRVPRNIKSL--SDIQIVQVACGYYHSLALSKASEVFSWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
I C P++IK L P QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 IDCNKQASPQLIKS----LTGIP----FMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYPS----PVDWCVGE---VRKLAAGGGHS 408
+N KS + W+P P D E V+++ +GG S
Sbjct: 332 TSNRKSPFTVKGNWFPYNGQCPPDVGSEEYFCVKRIFSGGDQS 374
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 159/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV++WG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFSWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C+ Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGIDCNKQAS-----PQLIKSLTGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 126/256 (49%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTEEGRK-HPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F+WG N++GQLG G + ++ P+ +K L F++ + GAH
Sbjct: 155 ASEVFSWGQNKYGQLGLGIDCNKQASPQLIKSLTGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 94/202 (46%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFSWGQNKYGQLGL-GIDCNKQASPQLIKSLTGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+++ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|356516391|ref|XP_003526878.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 440
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 161/327 (49%), Gaps = 44/327 (13%)
Query: 62 SRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC 121
SR L I+ G HT A+ S + +WG E GQLG G + R P + L ++ + SI+C
Sbjct: 13 SRVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIAC 72
Query: 122 GAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTIIC------- 170
GA T A +E R + L+ WG +F RL G P II
Sbjct: 73 GADHTLAYSESR--------NELYSWGWG---DFGRLGHGNSSDLLIPQPIIALQGLRIK 121
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
Q++CG H +A++ G +Q+WG N+ GQLG G + + L P+ I+ + I
Sbjct: 122 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTSEDSLV-PQKIQTFQGV--------PI 172
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
V+ G HS A++ENGE+Y WG G G LG L + +P +V ++D + VAC
Sbjct: 173 KMVAAGAEHSVAITENGELYGWGWGRYGNLG---LGDRNDRWIPEKVSSVDCDKMVMVAC 229
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
G H+ +++S G LY +G S+ GQLG G SL+P + + + V
Sbjct: 230 GWRHTISVSSLGGLYTYGWSKYGQLGHG--NFEDSLVPQKLQALSDKL--------ISQV 279
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+ G H++ G ++GWG+N +GQ
Sbjct: 280 SGGWRHSMALTSTGLLYGWGWNKFGQV 306
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 115/365 (31%), Positives = 170/365 (46%), Gaps = 58/365 (15%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLD-IACGHEHTAAVA-SDGTL 83
WG GQ G + +L LP L + +++ +D IACG +HT A + S L
Sbjct: 37 WGRGEDGQLGHGDTDDRL-----LPTHL----SALDAQQIDSIACGADHTLAYSESRNEL 87
Query: 84 FTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGTISTS 142
++WG +FG+LG G P+ + LQ +K I+CG +HC A E G + +
Sbjct: 88 YSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTME-----GEVQS- 141
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
WG+NQ + P I I V+ G+ H VA++E G L WG+
Sbjct: 142 ----WGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWG 197
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
YG LG G + R I +D +K+ V+CG H+ +VS G +YT+G
Sbjct: 198 RYGNLGLGD-----RNDRWIPEKVSSVD----CDKMVMVACGWRHTISVSSLGGLYTYGW 248
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLGH + + L+P+++ AL I V+ G HS ALTS G LY WG ++ GQ
Sbjct: 249 SKYGQLGHGNFE---DSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQ 305
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQLV--ACGHSHTLVYMRDGRIHGWGY 371
+G+G D R P+ V P+ ++V +CG HT+ + WG
Sbjct: 306 VGVG-------------DNVDRCSPVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGR 352
Query: 372 NSYGQ 376
+ GQ
Sbjct: 353 GTNGQ 357
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 125/231 (54%), Gaps = 23/231 (9%)
Query: 162 AFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFL 221
A +P + + +S G+ H VAL ++ +WG E GQLG G T + R++ + L
Sbjct: 8 ATSPPSRVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDD-----RLLPTHLSAL 62
Query: 222 DEAPELEKITQVSCGEYHSAAVSEN-GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL 280
D ++I ++CG H+ A SE+ E+Y+WG G G+LGH + L+P+ ++AL
Sbjct: 63 DA----QQIDSIACGADHTLAYSESRNELYSWGWGDFGRLGHGN---SSDLLIPQPIIAL 115
Query: 281 DGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI 340
G+ IK +ACG H A+T +G + +WG +Q GQLGLG T SL+P + T F+ +PI
Sbjct: 116 QGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLG--TSEDSLVPQKIQT-FQGVPI 172
Query: 341 LVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
++VA G H++ +G ++GWG+ YG W P V
Sbjct: 173 -------KMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKV 216
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 152/330 (46%), Gaps = 46/330 (13%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
+++ +Y WG+ G+ G G L IP+ + A R IACG H AV
Sbjct: 83 SRNELYSWGWGDFGRLGH-GNSSDLLIPQPII-------ALQGLRIKQIACGDSHCLAVT 134
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
+G + +WG N+ GQLG GT E P+K++ Q +K ++ GA + AI E E G
Sbjct: 135 MEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYG- 193
Query: 139 ISTSRLWVWGQ--NQGSNFPRLFWGAFTPNTIIC----QVSCGSVHVVALSECGLLQAWG 192
W WG+ N G W +++ C V+CG H +++S G L +G
Sbjct: 194 ------WGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYG 247
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
+++YGQLG G + L P+ ++ + L I+QVS G HS A++ G +Y W
Sbjct: 248 WSKYGQLGHGNFEDSLV-PQKLQALSDKL--------ISQVSGGWRHSMALTSTGLLYGW 298
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G GQ+G + P +V + ++CG H+ A+T K +++WG
Sbjct: 299 GWNKFGQVG---VGDNVDRCSPVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTN 355
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
GQLG G DT RN P ++
Sbjct: 356 GQLGHG-------------DTVDRNSPKII 372
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 86/191 (45%), Gaps = 15/191 (7%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
++ +S G H+ A+ V +WG G GQLGH D LLP + ALD I +
Sbjct: 14 RVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDT---DDRLLPTHLSALDAQQIDSI 70
Query: 289 ACGGVHSCALT-SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
ACG H+ A + S+ LY+WG G+LG G N SD I + +
Sbjct: 71 ACGADHTLAYSESRNELYSWGWGDFGRLGHG----------NSSDLLIPQPIIALQGLRI 120
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGG 406
+ +ACG SH L +G + WG N GQ S + P + G ++ +AAG
Sbjct: 121 KQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAE 180
Query: 407 HSAVLADACSL 417
HS + + L
Sbjct: 181 HSVAITENGEL 191
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 10/90 (11%)
Query: 23 IYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG+N GQ G +R + + P + + + I+CG HT AV
Sbjct: 295 LYGWGWNKFGQVGVGDNVDRCSPVQVKFPHD---------QKVVQISCGWRHTIAVTEKE 345
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQL 111
+F+WG GQLG G R P+ ++ L
Sbjct: 346 NVFSWGRGTNGQLGHGDTVDRNSPKIIEAL 375
>gi|383453816|ref|YP_005367805.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
gi|380728295|gb|AFE04297.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
Length = 748
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 122/383 (31%), Positives = 178/383 (46%), Gaps = 60/383 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++ WG N GQ G G ++ +P LP L + +A G+ HTAA
Sbjct: 414 LGANGRLWAWGDNQQGQLG-NGTQQDSSLP--LPVNLTDV--------ISVASGYRHTAA 462
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ SDGT++TWG N FGQLG+GT R P +V L V +I+ G + + A+ ++
Sbjct: 463 LRSDGTVWTWGMNRFGQLGEGTVTDRPTPVQVVGLGG--VTAIATGDNHSLAL----RSN 516
Query: 137 GTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
GT+ W WG N+ G+ R + + I ++ G H +AL G + A
Sbjct: 517 GTV-----WAWGFNRYGQLGDGTAVDRRQPVQASGLSNIVAIAAGGSHSLALRSDGTVWA 571
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
+GYN GQLG G + + +A L + ++ G +S A+ +G V+
Sbjct: 572 FGYNFDGQLGNG-----------TRTWTLVPVQAVGLSSVVSLAAGSLYSLALRADGTVW 620
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
WG + GQLG + Q + P +V L G I +A G HS AL S G ++AWG +
Sbjct: 621 AWGYNASGQLGVGTTQGSAQ---PLQVPGLSG--ITSIAAGSYHSLALRSDGWVWAWGFN 675
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGRIHG 368
GQLG G T S P LV + N V ++A G H+L DG +
Sbjct: 676 FEGQLGNGTSTPRLS-------------PGLVAGMSNAVAIIA-GDQHSLAMKADGTVWA 721
Query: 369 WGYNSYGQAANEKSTYAWYPSPV 391
WG N GQ +T AW+P V
Sbjct: 722 WGLNIKGQLGTGDTTEAWFPVQV 744
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 116/376 (30%), Positives = 173/376 (46%), Gaps = 61/376 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A + WG N GQ G E P+ P ++ G G D G HT
Sbjct: 363 LGADGTAWSWGDNVFGQLGDTTFE-----PRMAPVQVSGLALGR----ADATSGQLHTVM 413
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+ WG N+ GQLG+GT++ P V V S++ G TAA+ +D
Sbjct: 414 LGANGRLWAWGDNQQGQLGNGTQQDSSLPLPVNLTD---VISVASGYRHTAAL----RSD 466
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT--PNTI-------ICQVSCGSVHVVALSECGL 187
GT+ W WG N+ F +L G T P + + ++ G H +AL G
Sbjct: 467 GTV-----WTWGMNR---FGQLGEGTVTDRPTPVQVVGLGGVTAIATGDNHSLALRSNGT 518
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWG+N YGQLG G + Q P +A L I ++ G HS A+ +G
Sbjct: 519 VWAWGFNRYGQLGDGTAVDRRQ-PV----------QASGLSNIVAIAAGGSHSLALRSDG 567
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
V+ +G GQLG+ + L+P + V L + +A G ++S AL + G ++AW
Sbjct: 568 TVWAFGYNFDGQLGNGTRT---WTLVPVQAVGLSSVV--SLAAGSLYSLALRADGTVWAW 622
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G + +GQLG+G T S P + +P L +G+ +A G H+L DG +
Sbjct: 623 GYNASGQLGVG--TTQGSAQPLQ-------VPGL---SGITSIAAGSYHSLALRSDGWVW 670
Query: 368 GWGYNSYGQAANEKST 383
WG+N GQ N ST
Sbjct: 671 AWGFNFEGQLGNGTST 686
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 124/408 (30%), Positives = 175/408 (42%), Gaps = 71/408 (17%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A++ WG N Q G G +P Q G G + + G+ H+ A
Sbjct: 314 VRTDGAVWAWGDNRYRQLG-TGNLTSSPLPLQA-----GMTGG-----VTLVAGYRHSVA 362
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ +DGT ++WG N FGQLGD T E R P +V L + S H A
Sbjct: 363 LGADGTAWSWGDNVFGQLGDTTFEPRMAPVQVSGLALGRADATSGQLHTVMLGAN----- 417
Query: 137 GTISTSRLWVWGQN----------QGSNFPRLFWGAFTPN-TIICQVSCGSVHVVALSEC 185
RLW WG N Q S+ P N T + V+ G H AL
Sbjct: 418 -----GRLWAWGDNQQGQLGNGTQQDSSLP------LPVNLTDVISVASGYRHTAALRSD 466
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + WG N +GQLG G + +V+ L +T ++ G+ HS A+
Sbjct: 467 GTVWTWGMNRFGQLGEGTVTDRPTPVQVVG-----------LGGVTAIATGDNHSLALRS 515
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGIF-IKDVACGGVHSCALTSKGA 303
NG V+ WG GQL GD + RR V G+ I +A GG HS AL S G
Sbjct: 516 NGTVWAWGFNRYGQL-------GDGTAVDRRQPVQASGLSNIVAIAAGGSHSLALRSDGT 568
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 363
++A+G + GQLG G TR+++L+P ++ V + V +A G ++L D
Sbjct: 569 VWAFGYNFDGQLGNG--TRTWTLVPVQA----------VGLSSVVSLAAGSLYSLALRAD 616
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
G + WGYN+ GQ + + P V G + +AAG HS L
Sbjct: 617 GTVWAWGYNASGQLGVGTTQGSAQPLQVPGLSG-ITSIAAGSYHSLAL 663
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 131/450 (29%), Positives = 180/450 (40%), Gaps = 106/450 (23%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A A++ WG N SGQ G +L +P+++ A S + +A G H A
Sbjct: 115 LDADGAVWAWGDNASGQLGDGTLTSRL-LPQRVS---------ALSNVVSLASGFAHVLA 164
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ +DGT++ WG N QLGDGT P +V L S V ++ G+ A A D
Sbjct: 165 LRADGTVWAWGDNRNNQLGDGTLTRSSVPLQVPGL-SGVVAVVAGGSSSLALRA-----D 218
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSC---------GSVHVVALSECGL 187
GT LW WG N+ + +L G QV+ G+ H +AL G
Sbjct: 219 GT-----LWAWGDNR---YGQLGDGTTVRRITPVQVASLDSVVSVSVGAYHALALRADGT 270
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWG+N YGQLG G + Q V L + + G YHS AV +G
Sbjct: 271 VWAWGHNAYGQLGDGTNTQRTQPVSV------------SLTDVRTLVAGNYHSLAVRTDG 318
Query: 248 EVYTWGLGSVGQLGHCSLQS---------------------------------------- 267
V+ WG QLG +L S
Sbjct: 319 AVWAWGDNRYRQLGTGNLTSSPLPLQAGMTGGVTLVAGYRHSVALGADGTAWSWGDNVFG 378
Query: 268 --GDKELLPRRV-VALDGIFI--KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
GD PR V + G+ + D G +H+ L + G L+AWG +Q GQLG G Q
Sbjct: 379 QLGDTTFEPRMAPVQVSGLALGRADATSGQLHTVMLGANGRLWAWGDNQQGQLGNGTQQD 438
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKS 382
S ++P+ V V VA G+ HT DG + WG N +GQ
Sbjct: 439 S-------------SLPLPVNLTDVISVASGYRHTAALRSDGTVWTWGMNRFGQLGEGTV 485
Query: 383 TYAWYPSPVDWC-VGEVRKLAAGGGHSAVL 411
T P+PV +G V +A G HS L
Sbjct: 486 TD--RPTPVQVVGLGGVTAIATGDNHSLAL 513
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 164/382 (42%), Gaps = 62/382 (16%)
Query: 36 RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLG 95
R+ RQ R ++LPP + +A G H+ AV SDGT+F WG N GQLG
Sbjct: 38 REATVRQ-RAGERLPP-------------VRLALGQYHSLAVHSDGTVFAWGFNRLGQLG 83
Query: 96 DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQN----- 150
DGT + P +V L V S++ G + A+ + DG + W WG N
Sbjct: 84 DGTSRDKASPVQVAGLTQ--VTSVAAGDQYSLAL----DADGAV-----WAWGDNASGQL 132
Query: 151 -QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQ 209
G+ RL + + + ++ G HV+AL G + AWG N QLG G
Sbjct: 133 GDGTLTSRLLPQRVSALSNVVSLASGFAHVLALRADGTVWAWGDNRNNQLGDGTLTR--- 189
Query: 210 GPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGD 269
+ + P L + V G S A+ +G ++ WG GQLG +
Sbjct: 190 --------SSVPLQVPGLSGVVAVVAGGSSSLALRADGTLWAWGDNRYGQLGDGTTV--- 238
Query: 270 KELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPN 329
+ + P +V +LD + V+ G H+ AL + G ++AWG + GQLG G T+
Sbjct: 239 RRITPVQVASLD--SVVSVSVGAYHALALRADGTVWAWGHNAYGQLGDGTNTQ------- 289
Query: 330 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPS 389
R P+ V V+ + G+ H+L DG + WG N Y Q T + P
Sbjct: 290 ------RTQPVSVSLTDVRTLVAGNYHSLAVRTDGAVWAWGDNRYRQLGTGNLTSS--PL 341
Query: 390 PVDWCVGEVRKLAAGGGHSAVL 411
P+ + L AG HS L
Sbjct: 342 PLQAGMTGGVTLVAGYRHSVAL 363
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 119/408 (29%), Positives = 173/408 (42%), Gaps = 72/408 (17%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIAC----GHE 72
+ A ++ WG N GQ G R++ P Q+ LD G
Sbjct: 215 LRADGTLWAWGDNRYGQLGDGTTVRRI-TPVQVAS-------------LDSVVSVSVGAY 260
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
H A+ +DGT++ WG N +GQLGDGT R P V V+++ G + + A+
Sbjct: 261 HALALRADGTVWAWGHNAYGQLGDGTNTQRTQPVSVSLTD---VRTLVAGNYHSLAV--- 314
Query: 133 RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQ--------VSCGSVHVVALSE 184
DG + W WG N+ + +L G T + + Q + G H VAL
Sbjct: 315 -RTDGAV-----WAWGDNR---YRQLGTGNLTSSPLPLQAGMTGGVTLVAGYRHSVALGA 365
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G +WG N +GQLG T E P + G A +A + G+ H+ +
Sbjct: 366 DGTAWSWGDNVFGQLGD-TTFEPRMAPVQVSGLALGRADA---------TSGQLHTVMLG 415
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
NG ++ WG GQLG+ + Q LP V D + VA G H+ AL S G +
Sbjct: 416 ANGRLWAWGDNQQGQLGNGTQQ---DSSLPLPVNLTD---VISVASGYRHTAALRSDGTV 469
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRD 363
+ WG ++ GQLG G T R P+ VV GV +A G +H+L +
Sbjct: 470 WTWGMNRFGQLGEGTVTD-------------RPTPVQVVGLGGVTAIATGDNHSLALRSN 516
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
G + WG+N YGQ + + P + + +AAGG HS L
Sbjct: 517 GTVWAWGFNRYGQLGDGTAVDRRQPVQAS-GLSNIVAIAAGGSHSLAL 563
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 116/369 (31%), Positives = 169/369 (45%), Gaps = 63/369 (17%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + ++ WG+N GQ G G R K P ++ G ++ +A G +++ A
Sbjct: 65 VHSDGTVFAWGFNRLGQLG-DGTSRD----KASPVQVAGL-----TQVTSVAAGDQYSLA 114
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ +DG ++ WG N GQLGDGT R P++V L S V S AH A A D
Sbjct: 115 LDADGAVWAWGDNASGQLGDGTLTSRLLPQRVSAL-SNVVSLASGFAHVLALRA-----D 168
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVS--CGSVHVV-------ALSECGL 187
GT+ W WG N+ + G T +++ QV G V VV AL G
Sbjct: 169 GTV-----WAWGDNRNNQLGD---GTLTRSSVPLQVPGLSGVVAVVAGGSSSLALRADGT 220
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
L AWG N YGQLG G T + +V L+ + VS G YH+ A+ +G
Sbjct: 221 LWAWGDNRYGQLGDGTTVRRITPVQV-----------ASLDSVVSVSVGAYHALALRADG 269
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
V+ WG + GQLG + + P V D ++ + G HS A+ + GA++AW
Sbjct: 270 TVWAWGHNAYGQLGDG---TNTQRTQPVSVSLTD---VRTLVAGNYHSLAVRTDGAVWAW 323
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G ++ QLG G T S +P ++ + GV LVA G+ H++ DG
Sbjct: 324 GDNRYRQLGTGNLTS--SPLPLQAG----------MTGGVTLVA-GYRHSVALGADGTAW 370
Query: 368 GWGYNSYGQ 376
WG N +GQ
Sbjct: 371 SWGDNVFGQ 379
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 99/226 (43%), Gaps = 28/226 (12%)
Query: 197 GQLGRGITCE-------GLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
G L G+ C G PR A A E +++ G+YHS AV +G V
Sbjct: 16 GLLALGVLCAACGADLPGAAAPR----EATVRQRAGERLPPVRLALGQYHSLAVHSDGTV 71
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
+ WG +GQLG + S DK P +V L + VA G +S AL + GA++AWG
Sbjct: 72 FAWGFNRLGQLGDGT--SRDKA-SPVQVAGL--TQVTSVAAGDQYSLALDADGAVWAWGD 126
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGW 369
+ +GQLG G T + L+P + + N V L A G +H L DG + W
Sbjct: 127 NASGQLGDG--TLTSRLLPQR---------VSALSNVVSL-ASGFAHVLALRADGTVWAW 174
Query: 370 GYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADAC 415
G N Q + T + P V G V +A G A+ AD
Sbjct: 175 GDNRNNQLGDGTLTRSSVPLQVPGLSGVVAVVAGGSSSLALRADGT 220
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N GQ G P+ P + G S + I G +H+ A+ +DGT
Sbjct: 669 VWAWGFNFEGQLGNG-----TSTPRLSPGLVAGM-----SNAVAIIAGDQHSLAMKADGT 718
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQ 112
++ WG N GQLG G P +V+ +
Sbjct: 719 VWAWGLNIKGQLGTGDTTEAWFPVQVQGIH 748
>gi|356508943|ref|XP_003523212.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 441
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 160/327 (48%), Gaps = 44/327 (13%)
Query: 62 SRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC 121
SR L I+ G HT A+ S + +WG E GQLG G + R P ++ L ++ + SI+C
Sbjct: 14 SRVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRPLPTQLSALDAQHIDSIAC 73
Query: 122 GAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTIIC------- 170
GA T A +E R + L+ WG +F RL G P II
Sbjct: 74 GADHTLAYSESR--------NELYSWGWG---DFGRLGHGNSSDLLIPQPIIALQGLRIK 122
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
Q++CG H +A++ G +Q+WG N+ GQLG G T + L P+ I+ + I
Sbjct: 123 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGNTEDSLV-PQKIQAFKGV--------PI 173
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
V+ G HS A++ENGE+Y WG G G LG L + P +V ++D + VAC
Sbjct: 174 KMVAAGAEHSVAITENGELYGWGWGRYGNLG---LGDRNDRWNPEKVSSVDCDKMVMVAC 230
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
G H+ +++S G +Y +G S+ GQLG G SL+P + + + V
Sbjct: 231 GWRHTISVSSSGGIYTYGWSKYGQLGHG--NFEDSLVPQKLQALSDKL--------ISQV 280
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+ G H++ G + GWG+N +GQ
Sbjct: 281 SGGWRHSMALTSTGLLFGWGWNKFGQV 307
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 111/365 (30%), Positives = 169/365 (46%), Gaps = 58/365 (15%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLD-IACGHEHTAAVA-SDGTL 83
WG GQ G G +P QL + +++ +D IACG +HT A + S L
Sbjct: 38 WGRGEDGQLGH-GDTDDRPLPTQL--------SALDAQHIDSIACGADHTLAYSESRNEL 88
Query: 84 FTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGTISTS 142
++WG +FG+LG G P+ + LQ +K I+CG +HC A E G + +
Sbjct: 89 YSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTME-----GEVQS- 142
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
WG+NQ +L G + P I I V+ G+ H VA++E G L W
Sbjct: 143 ----WGRNQNG---QLGLGNTEDSLVPQKIQAFKGVPIKMVAAGAEHSVAITENGELYGW 195
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G+ YG LG G + +V + + +K+ V+CG H+ +VS +G +YT
Sbjct: 196 GWGRYGNLGLGDRNDRWNPEKV---------SSVDCDKMVMVACGWRHTISVSSSGGIYT 246
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
+G GQLGH + + L+P+++ AL I V+ G HS ALTS G L+ WG ++
Sbjct: 247 YGWSKYGQLGHGNFE---DSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLFGWGWNK 303
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGY 371
GQ+G+G S + + R + I +CG HT+ + WG
Sbjct: 304 FGQVGVGDNLDHCSPVQVKFPQDQRVVQI----------SCGWRHTIAVTEKENVFSWGR 353
Query: 372 NSYGQ 376
+ GQ
Sbjct: 354 GTNGQ 358
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 120/231 (51%), Gaps = 23/231 (9%)
Query: 162 AFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFL 221
A +P + + +S G+ H VAL ++ +WG E GQLG G T + R + L
Sbjct: 9 ATSPPSRVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDD-----RPLPTQLSAL 63
Query: 222 DEAPELEKITQVSCGEYHSAAVSEN-GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL 280
D + I ++CG H+ A SE+ E+Y+WG G G+LGH + L+P+ ++AL
Sbjct: 64 DA----QHIDSIACGADHTLAYSESRNELYSWGWGDFGRLGHGN---SSDLLIPQPIIAL 116
Query: 281 DGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI 340
G+ IK +ACG H A+T +G + +WG +Q GQLGLG SL+P + F+ +PI
Sbjct: 117 QGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLG--NTEDSLVPQKIQA-FKGVPI 173
Query: 341 LVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
++VA G H++ +G ++GWG+ YG W P V
Sbjct: 174 -------KMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWNPEKV 217
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 153/336 (45%), Gaps = 58/336 (17%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
+++ +Y WG+ G+ G G L IP+ + A R IACG H AV
Sbjct: 84 SRNELYSWGWGDFGRLGH-GNSSDLLIPQPII-------ALQGLRIKQIACGDSHCLAVT 135
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
+G + +WG N+ GQLG G E P+K++ + +K ++ GA + AI E E G
Sbjct: 136 MEGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAFKGVPIKMVAAGAEHSVAITENGELYG- 194
Query: 139 ISTSRLWVWGQ--NQGSNFPRLFWGAFTPNTIIC----QVSCGSVHVVALSECGLLQAWG 192
W WG+ N G W +++ C V+CG H +++S G + +G
Sbjct: 195 ------WGWGRYGNLGLGDRNDRWNPEKVSSVDCDKMVMVACGWRHTISVSSSGGIYTYG 248
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
+++YGQLG G + L P+ ++ + L I+QVS G HS A++ G ++ W
Sbjct: 249 WSKYGQLGHGNFEDSLV-PQKLQALSDKL--------ISQVSGGWRHSMALTSTGLLFGW 299
Query: 253 GLGSVGQLG------HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
G GQ+G HCS P +V + ++CG H+ A+T K +++
Sbjct: 300 GWNKFGQVGVGDNLDHCS---------PVQVKFPQDQRVVQISCGWRHTIAVTEKENVFS 350
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
WG GQLG G DT RN P ++
Sbjct: 351 WGRGTNGQLGHG-------------DTIDRNSPKII 373
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 125/251 (49%), Gaps = 28/251 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + + WG N +GQ G E L +P+++ G P +A G EH+ A
Sbjct: 134 VTMEGEVQSWGRNQNGQLGLGNTEDSL-VPQKIQA-FKGVPIKM------VAAGAEHSVA 185
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ +G L+ WG +G LG G R +PEKV + + + ++CG T +++ +
Sbjct: 186 ITENGELYGWGWGRYGNLGLGDRNDRWNPEKVSSVDCDKMVMVACGWRHTISVS----SS 241
Query: 137 GTISTSRLWVWGQNQGSNF-----PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
G I T +GQ NF P+ + +I QVS G H +AL+ GLL W
Sbjct: 242 GGIYTYGWSKYGQLGHGNFEDSLVPQKL--QALSDKLISQVSGGWRHSMALTSTGLLFGW 299
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G+N++GQ+G G + +V KF P+ +++ Q+SCG H+ AV+E V++
Sbjct: 300 GWNKFGQVGVGDNLDHCSPVQV-----KF----PQDQRVVQISCGWRHTIAVTEKENVFS 350
Query: 252 WGLGSVGQLGH 262
WG G+ GQLGH
Sbjct: 351 WGRGTNGQLGH 361
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 86/191 (45%), Gaps = 15/191 (7%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
++ +S G H+ A+ V +WG G GQLGH D LP ++ ALD I +
Sbjct: 15 RVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDT---DDRPLPTQLSALDAQHIDSI 71
Query: 289 ACGGVHSCALT-SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
ACG H+ A + S+ LY+WG G+LG G N SD I + +
Sbjct: 72 ACGADHTLAYSESRNELYSWGWGDFGRLGHG----------NSSDLLIPQPIIALQGLRI 121
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGG 406
+ +ACG SH L +G + WG N GQ + + P + G ++ +AAG
Sbjct: 122 KQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAFKGVPIKMVAAGAE 181
Query: 407 HSAVLADACSL 417
HS + + L
Sbjct: 182 HSVAITENGEL 192
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 26/220 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I +Y WG+ G G R + P+++ C + + +ACG HT +
Sbjct: 186 ITENGELYGWGWGRYGNLGLGDRNDRWN-PEKVSS--VDC-----DKMVMVACGWRHTIS 237
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V+S G ++T+G +++GQLG G E P+K++ L + + +S G + A+
Sbjct: 238 VSSSGGIYTYGWSKYGQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALT------ 291
Query: 137 GTISTSRLWVWGQNQ------GSNFPRL--FWGAFTPNTIICQVSCGSVHVVALSECGLL 188
ST L+ WG N+ G N F + + Q+SCG H +A++E +
Sbjct: 292 ---STGLLFGWGWNKFGQVGVGDNLDHCSPVQVKFPQDQRVVQISCGWRHTIAVTEKENV 348
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+WG GQLG G T + P++I+ + P +E
Sbjct: 349 FSWGRGTNGQLGHGDTID-RNSPKIIEALSVDGSAGPHIE 387
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 9/124 (7%)
Query: 12 RPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGH 71
R ++ + IY +G++ GQ G E L +P++L A ++ ++ G
Sbjct: 233 RHTISVSSSGGIYTYGWSKYGQLGHGNFEDSL-VPQKLQ-------ALSDKLISQVSGGW 284
Query: 72 EHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
H+ A+ S G LF WG N+FGQ+G G P +VK Q + V ISCG T A+ E
Sbjct: 285 RHSMALTSTGLLFGWGWNKFGQVGVGDNLDHCSPVQVKFPQDQRVVQISCGWRHTIAVTE 344
Query: 132 PREN 135
+EN
Sbjct: 345 -KEN 347
>gi|351702482|gb|EHB05401.1| Putative E3 ubiquitin-protein ligase HERC4 [Heterocephalus glaber]
Length = 1057
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 121/406 (29%), Positives = 189/406 (46%), Gaps = 58/406 (14%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QVSCG H +ALS+ + +WG N+YGQLG G
Sbjct: 115 QLGLLGSEECIRVPRNIKS--LSDIQIVQVSCGYYHSLALSKASEVFSWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
I C+ P++IK QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 IDCKKQTSPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WY------PSPVD----WCVGEVRKLAAGGGHS 408
+N KS + W+ P +D +C V+++ +GG S
Sbjct: 332 TSNRKSPFTVKGNWFSYNGQCPPDIDSQEYFC---VKRIFSGGDQS 374
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/339 (31%), Positives = 158/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QVSCG YHS A+S+ EV++WG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDI--------QIVQVSCGYYHSLALSKASEVFSWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGIDCKKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 126/256 (49%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + ++CG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNI-------KSLSDIQIVQVSCGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F+WG N++GQLG G + + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFSWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFSWGQNKYGQLGL-GIDCKKQTSPQLIKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|350396381|ref|XP_003484535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
impatiens]
Length = 1088
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 116/385 (30%), Positives = 176/385 (45%), Gaps = 54/385 (14%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQL-RIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
K ++ WG G+ G G E ++ +P Q+ + S IACG +T +
Sbjct: 30 KGDMFCWGNTRHGELGLGGIEDEIILVPCQVDFK-------KASEIQQIACGENYTVVIT 82
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG +++ G N++GQLG E GRK + + L + K ++CGA+ T A+ E
Sbjct: 83 HDGKIYSCGNNDYGQLGH--ERGRKRLQLILGLDAFVFKKVACGAYHTIAVNE------- 133
Query: 139 ISTSRLWVWGQN-------QGSNF----PRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
+L+ WG N NF PR+ T +II QV+CG H +AL+ G
Sbjct: 134 --WGQLFSWGSNSEGQLGLNSKNFMECSPRMVKTLGT--SIIVQVACGMKHALALTNNGE 189
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
L +WG N GQLG G+ P++I A I ++CG YHS A+S++G
Sbjct: 190 LYSWGSNSEGQLGLGVDIRSEVKPKLINTLAGV--------PIAFIACGGYHSIAISKSG 241
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
++ WG + GQLG Q+ + LP ++ L I ACG S LT G ++
Sbjct: 242 AIFGWGKNTFGQLGLNDTQNRN---LPHQLQTLRNAKICYAACGEEFSVFLTVDGGVFTC 298
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRI 366
G GQLG G N ++ R + + ++ + V ++CG HTL + GR+
Sbjct: 299 GAGMYGQLGHG---------SNNNEILPRQV-MELMGSTVTQISCGKRHTLALVPSQGRV 348
Query: 367 HGWGYNSYGQAANEKSTYAWYPSPV 391
+ WG GQ N + P V
Sbjct: 349 YAWGLGGAGQLGNNSTRSIPTPQVV 373
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 167/349 (47%), Gaps = 44/349 (12%)
Query: 76 AVASDGTLFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
++ G +F WG G+LG G +E P +V ++ ++ I+CG + T I
Sbjct: 26 SLLKKGDMFCWGNTRHGELGLGGIEDEIILVPCQVDFKKASEIQQIACGENYTVVIT--- 82
Query: 134 ENDGTISTSRLWVWGQ---NQGSNFPRLFWG--AFTPNTIICQVSCGSVHVVALSECGLL 188
+DG I + +GQ +G +L G AF + +V+CG+ H +A++E G L
Sbjct: 83 -HDGKIYSCGNNDYGQLGHERGRKRLQLILGLDAF----VFKKVACGAYHTIAVNEWGQL 137
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG N GQLG PR++K + I QV+CG H+ A++ NGE
Sbjct: 138 FSWGSNSEGQLGLNSKNFMECSPRMVKTLGTSI--------IVQVACGMKHALALTNNGE 189
Query: 249 VYTWGLGSVGQLGH-CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
+Y+WG S GQLG ++S E+ P+ + L G+ I +ACGG HS A++ GA++ W
Sbjct: 190 LYSWGSNSEGQLGLGVDIRS---EVKPKLINTLAGVPIAFIACGGYHSIAISKSGAIFGW 246
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIP--ILVVPNG-VQLVACGHSHTLVYMRDG 364
G + GQLGL +DT RN+P + + N + ACG ++ DG
Sbjct: 247 GKNTFGQLGL-------------NDTQNRNLPHQLQTLRNAKICYAACGEEFSVFLTVDG 293
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
+ G YGQ + + P V +G V +++ G H+ L
Sbjct: 294 GVFTCGAGMYGQLGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALV 342
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 91/200 (45%), Gaps = 20/200 (10%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG N GQ G + I ++ P+L AG + IACG H+ A++ G
Sbjct: 190 LYSWGSNSEGQLGLG-----VDIRSEVKPKLINTLAGVPIAF--IACGGYHSIAISKSGA 242
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F WG N FGQLG + R P +++ L++ + +CG + + DG + T
Sbjct: 243 IFGWGKNTFGQLGLNDTQNRNLPHQLQTLRNAKICYAACGEEFSVFLTV----DGGVFTC 298
Query: 143 RLWVWGQ-----NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC-GLLQAWGYNEY 196
++GQ N PR + + Q+SCG H +AL G + AWG
Sbjct: 299 GAGMYGQLGHGSNNNEILPRQVMELM--GSTVTQISCGKRHTLALVPSQGRVYAWGLGGA 356
Query: 197 GQLGRGITCEGLQGPRVIKG 216
GQLG T + P+V+ G
Sbjct: 357 GQLGNNST-RSIPTPQVVHG 375
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 58/132 (43%), Gaps = 16/132 (12%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I AI+ WG N GQ G + + +P QL N++ ACG E +
Sbjct: 237 ISKSGAIFGWGKNTFGQLGLNDTQNR-NLPHQLQ-------TLRNAKICYAACGEEFSVF 288
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +FT GA +GQLG G+ P +V +L V ISCG T A+
Sbjct: 289 LTVDGGVFTCGAGMYGQLGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVP----- 343
Query: 137 GTISTSRLWVWG 148
S R++ WG
Sbjct: 344 ---SQGRVYAWG 352
>gi|73952739|ref|XP_849808.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Canis lupus familiaris]
Length = 1057
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 187/403 (46%), Gaps = 52/403 (12%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLLGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
I C+ P++IK QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 IDCKKQASPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYPS----PVDWCVGE---VRKLAAGGGHS 408
+N KS + W+P P D E V+++ +GG S
Sbjct: 332 TSNRKSPFTVKGNWFPYNGQCPPDIDSEEYFCVKRIFSGGDQS 374
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGIDCKKQAS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 125/256 (48%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG G + + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GIDCKKQASPQLIKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+++ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A + G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|301755904|ref|XP_002913788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Ailuropoda melanoleuca]
gi|281346973|gb|EFB22557.1| hypothetical protein PANDA_001627 [Ailuropoda melanoleuca]
Length = 1057
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 187/403 (46%), Gaps = 52/403 (12%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLLGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
I C+ P++IK QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 IDCKKQASPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYPS----PVDWCVGE---VRKLAAGGGHS 408
+N KS + W+P P D E V+++ +GG S
Sbjct: 332 TSNRKSPFTVKGNWFPYTGQCPPDIDSEEYFCVKRIFSGGDQS 374
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGIDCKKQAS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 125/256 (48%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG G + + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GIDCKKQASPQLIKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+++ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A + G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|281207647|gb|EFA81827.1| putative protein serine/threonine kinase [Polysphondylium pallidum
PN500]
Length = 1626
Score = 145 bits (366), Expect = 4e-32, Method: Composition-based stats.
Identities = 109/370 (29%), Positives = 169/370 (45%), Gaps = 51/370 (13%)
Query: 63 RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG 122
R + + G H A ++ G LFTWG ++G+LG G EE P++V L + +K + CG
Sbjct: 130 RIILVNAGAAHIAMISQSGKLFTWGEGQYGRLGHGDEESISTPKQVVALANIPMKYVFCG 189
Query: 123 AHCTAAIAEPRENDGTISTSRLWVWGQNQ---------GSNFPRLFWGAFTPNTI-ICQV 172
T A++ + S L+ WG N+ G +F L P + +
Sbjct: 190 GRSTIALSH-------TAGSGLYTWGNNEFGQLGRGDCGDDFTCLPESVAVPGAKRLVAL 242
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
G+ + G L WG ++G+LG G T Q V Y +
Sbjct: 243 DAGASRAAVIDSSGALFTWGRGDHGRLGHGDTENRYQPTLVSSLYGHV---------VVA 293
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGIFIKDVACG 291
V+ G HS A+++ GE+++WG G GQLGH S QS ++L P+++ +D I ++ G
Sbjct: 294 VALGGGHSLALTKAGELFSWGRGENGQLGHGSYQS--QQLAPKQLQFFVDMPKIIGISAG 351
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI-LVVPNGVQL- 349
G HS A G++YAWG S G LG G +SD NIP +++P G++
Sbjct: 352 GYHSVAQLDDGSVYAWGMSDYGILGTG-----------DSDDGAINIPQRILMPRGIRFK 400
Query: 350 -VACGHSHTLVYMRDGRIHGWGYNSYGQAA--NEKSTYAWYP------SPVDWCVGEVRK 400
++CG HT+ D I+ WG G+ NEK+ A PV + GE+
Sbjct: 401 TISCGFQHTVALTSDNTIYSWGCGLGGRLGTFNEKNQCAPIACNIPNYQPVVFSAGEIST 460
Query: 401 LAAGGGHSAV 410
+ G ++ V
Sbjct: 461 IVIGKKNTVV 470
Score = 101 bits (251), Expect = 9e-19, Method: Composition-based stats.
Identities = 71/200 (35%), Positives = 101/200 (50%), Gaps = 23/200 (11%)
Query: 225 PELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDG 282
PE E+I V+ G H A +S++G+++TWG G G+LGH GD+E + P++VVAL
Sbjct: 127 PE-ERIILVNAGAAHIAMISQSGKLFTWGEGQYGRLGH-----GDEESISTPKQVVALAN 180
Query: 283 IFIKDVACGGVHSCAL--TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI 340
I +K V CGG + AL T+ LY WG ++ GQLG G F+ +P
Sbjct: 181 IPMKYVFCGGRSTIALSHTAGSGLYTWGNNEFGQLGRGDCGDDFTCLPES---------- 230
Query: 341 LVVPNGVQLVA--CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE- 397
+ VP +LVA G S V G + WG +G+ + + + P+ V G
Sbjct: 231 VAVPGAKRLVALDAGASRAAVIDSSGALFTWGRGDHGRLGHGDTENRYQPTLVSSLYGHV 290
Query: 398 VRKLAAGGGHSAVLADACSL 417
V +A GGGHS L A L
Sbjct: 291 VVAVALGGGHSLALTKAGEL 310
Score = 95.9 bits (237), Expect = 4e-17, Method: Composition-based stats.
Identities = 72/257 (28%), Positives = 109/257 (42%), Gaps = 40/257 (15%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A S +Y WG N GQ GR PE P R + + G A +
Sbjct: 200 AGSGLYTWGNNEFGQLGRGDCGDDF----TCLPESVAVPGA--KRLVALDAGASRAAVID 253
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
S G LFTWG + G+LG G E R P V L V +++ G + A+ + E
Sbjct: 254 SSGALFTWGRGDHGRLGHGDTENRYQPTLVSSLYGHVVVAVALGGGHSLALTKAGE---- 309
Query: 139 ISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-------------ICQVSCGSVHVVALSEC 185
L+ WG+ + +L G++ + I +S G H VA +
Sbjct: 310 -----LFSWGRGENG---QLGHGSYQSQQLAPKQLQFFVDMPKIIGISAGGYHSVAQLDD 361
Query: 186 GLLQAWGYNEYGQLGRGITCEG-LQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G + AWG ++YG LG G + +G + P+ I P + +SCG H+ A++
Sbjct: 362 GSVYAWGMSDYGILGTGDSDDGAINIPQRIL--------MPRGIRFKTISCGFQHTVALT 413
Query: 245 ENGEVYTWGLGSVGQLG 261
+ +Y+WG G G+LG
Sbjct: 414 SDNTIYSWGCGLGGRLG 430
Score = 94.0 bits (232), Expect = 1e-16, Method: Composition-based stats.
Identities = 73/278 (26%), Positives = 118/278 (42%), Gaps = 65/278 (23%)
Query: 148 GQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEG 207
G N ++ + F + P I V+ G+ H+ +S+ G L WG +YG+LG G E
Sbjct: 111 GSNNNNDDDKYFTKLY-PEERIILVNAGAAHIAMISQSGKLFTWGEGQYGRLGHGDE-ES 168
Query: 208 LQGPRVIKGYAKF---------------------------------------------LD 222
+ P+ + A L
Sbjct: 169 ISTPKQVVALANIPMKYVFCGGRSTIALSHTAGSGLYTWGNNEFGQLGRGDCGDDFTCLP 228
Query: 223 EA---PELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRV 277
E+ P +++ + G +A + +G ++TWG G G+LGH GD E P V
Sbjct: 229 ESVAVPGAKRLVALDAGASRAAVIDSSGALFTWGRGDHGRLGH-----GDTENRYQPTLV 283
Query: 278 VALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRN 337
+L G + VA GG HS ALT G L++WG + GQLG G +S L P + +F +
Sbjct: 284 SSLYGHVVVAVALGGGHSLALTKAGELFSWGRGENGQLGHG-SYQSQQLAPKQLQ-FFVD 341
Query: 338 IPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
+P ++ ++ G H++ + DG ++ WG + YG
Sbjct: 342 MPKIIG------ISAGGYHSVAQLDDGSVYAWGMSDYG 373
Score = 47.4 bits (111), Expect = 0.015, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 1 MDINEIIGETARPVDNIPA--KSAIYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCP 57
+D+ +IIG +A ++ ++Y WG + G G + + IP+++ P
Sbjct: 340 VDMPKIIGISAGGYHSVAQLDDGSVYAWGMSDYGILGTGDSDDGAINIPQRIL-----MP 394
Query: 58 AGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHP 105
G R+ I+CG +HT A+ SD T+++WG G+LG E+ + P
Sbjct: 395 RGI--RFKTISCGFQHTVALTSDNTIYSWGCGLGGRLGTFNEKNQCAP 440
>gi|73952755|ref|XP_536367.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Canis lupus familiaris]
Length = 1049
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 187/403 (46%), Gaps = 52/403 (12%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLLGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
I C+ P++IK QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 IDCKKQASPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYPS----PVDWCVGE---VRKLAAGGGHS 408
+N KS + W+P P D E V+++ +GG S
Sbjct: 332 TSNRKSPFTVKGNWFPYNGQCPPDIDSEEYFCVKRIFSGGDQS 374
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGIDCKKQAS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 125/256 (48%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG G + + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GIDCKKQASPQLIKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+++ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A + G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|91204161|emb|CAJ71814.1| conserved hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 411
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 113/375 (30%), Positives = 169/375 (45%), Gaps = 60/375 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG NH+GQ G P F + IA G EH AV SDGT
Sbjct: 57 VWAWGGNHAGQLGDGTTN----------PRKFAIQVKGLEDVVSIAAGWEHNLAVKSDGT 106
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG N FGQLGDGT E R P KVK ++ V I G + + A+ ++DGT+
Sbjct: 107 VWAWGNNRFGQLGDGTNENRNTPVKVKTIKD--VTEIDAGFYHSIAL----QSDGTV--- 157
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-----ICQVSCGSVHVVALSECGLLQAWGY 193
WVWG N+ +L G A+ P + + VS G+ H + L G + WG
Sbjct: 158 --WVWGNNE---LDQLGDGTKSDAYKPMQVQGLNNVVAVSGGNHHNLVLKADGTIWGWGA 212
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
N YGQLG G E + + ++ G ++ AV +G ++ WG
Sbjct: 213 NGYGQLGDGTMTE-----------SSIPTPVYDFNGAVFIASGNNYNVAVKADGSIWGWG 261
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
+ + GQLG+ + Q+ K +P R+ L+ +A GG H+ L G + + G ++ G
Sbjct: 262 MNTYGQLGNGT-QTNSK--IPIRINGLNNSV--SIATGGYHALILQQDGTVLSMGYNRTG 316
Query: 314 QLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNS 373
QLG G S+ + + + + + V +A G+ H+L +DG I WG N
Sbjct: 317 QLGTGA----------TSNYQYTTLKVHGLSDVVS-IAAGYYHSLALKKDGTIWAWGNNE 365
Query: 374 YGQAANEKSTYAWYP 388
YGQ + Y P
Sbjct: 366 YGQLGDGTLNYKKLP 380
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/359 (30%), Positives = 165/359 (45%), Gaps = 61/359 (16%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
I+ G H+ + DGT++ WG N GQLGDGT RK +VK L E V SI+ G
Sbjct: 41 ISGGGSHSLVLKPDGTVWAWGGNHAGQLGDGTTNPRKFAIQVKGL--EDVVSIAAGWEHN 98
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-----ICQVSCG 175
A+ ++DGT+ W WG N+ G+N R TP + + ++ G
Sbjct: 99 LAV----KSDGTV-----WAWGNNRFGQLGDGTNENR-----NTPVKVKTIKDVTEIDAG 144
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
H +AL G + WG NE QLG G + + P ++G L + VS
Sbjct: 145 FYHSIALQSDGTVWVWGNNELDQLGDGTKSDAYK-PMQVQG----------LNNVVAVSG 193
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG-IFIKDVACGGVH 294
G +H+ + +G ++ WG GQLG ++ + +P V +G +FI A G +
Sbjct: 194 GNHHNLVLKADGTIWGWGANGYGQLGDGTMT---ESSIPTPVYDFNGAVFI---ASGNNY 247
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLVAC 352
+ A+ + G+++ WG + GQLG G QT S IPI + + N V +A
Sbjct: 248 NVAVKADGSIWGWGMNTYGQLGNGTQTNS-------------KIPIRINGLNNSVS-IAT 293
Query: 353 GHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
G H L+ +DG + GYN GQ ++ Y + + +V +AAG HS L
Sbjct: 294 GGYHALILQQDGTVLSMGYNRTGQLGTGATSNYQYTTLKVHGLSDVVSIAAGYYHSLAL 352
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 114/246 (46%), Gaps = 30/246 (12%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ Q+S G H + L G + AWG N GQLG G T PR KF + LE
Sbjct: 38 VPQISGGGSHSLVLKPDGTVWAWGGNHAGQLGDGTT-----NPR------KFAIQVKGLE 86
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
+ ++ G H+ AV +G V+ WG GQLG + ++ + P +V + + ++
Sbjct: 87 DVVSIAAGWEHNLAVKSDGTVWAWGNNRFGQLGDGTNENRNT---PVKVKTIKDV--TEI 141
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGV 347
G HS AL S G ++ WG ++ QLG G ++ ++ P+ V N V
Sbjct: 142 DAGFYHSIALQSDGTVWVWGNNELDQLGDGTKSDAYK-------------PMQVQGLNNV 188
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH 407
V+ G+ H LV DG I GWG N YGQ + T + P+PV G V + +
Sbjct: 189 VAVSGGNHHNLVLKADGTIWGWGANGYGQLGDGTMTESSIPTPVYDFNGAVFIASGNNYN 248
Query: 408 SAVLAD 413
AV AD
Sbjct: 249 VAVKAD 254
>gi|301755908|ref|XP_002913790.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
3 [Ailuropoda melanoleuca]
Length = 1054
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 187/403 (46%), Gaps = 52/403 (12%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLLGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
I C+ P++IK QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 IDCKKQASPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYPS----PVDWCVGE---VRKLAAGGGHS 408
+N KS + W+P P D E V+++ +GG S
Sbjct: 332 TSNRKSPFTVKGNWFPYTGQCPPDIDSEEYFCVKRIFSGGDQS 374
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGIDCKKQAS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 125/256 (48%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG G + + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GIDCKKQASPQLIKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+++ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A + G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|301755906|ref|XP_002913789.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Ailuropoda melanoleuca]
Length = 1049
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 187/403 (46%), Gaps = 52/403 (12%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLLGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
I C+ P++IK QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 IDCKKQASPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYPS----PVDWCVGE---VRKLAAGGGHS 408
+N KS + W+P P D E V+++ +GG S
Sbjct: 332 TSNRKSPFTVKGNWFPYTGQCPPDIDSEEYFCVKRIFSGGDQS 374
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGIDCKKQAS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 125/256 (48%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG G + + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GIDCKKQASPQLIKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+++ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|115378347|ref|ZP_01465512.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|310825395|ref|YP_003957753.1| bnr repeat domain-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|115364660|gb|EAU63730.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|309398467|gb|ADO75926.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 382
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 125/382 (32%), Positives = 176/382 (46%), Gaps = 60/382 (15%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A +++ WG + SG LR L P S + +A G H+ AV
Sbjct: 49 ADGSVWAWGASASG----------LREEGALSRRFAPVPVPGLSDIVSVAAGGAHSLAVR 98
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
+DGTL+TWG N +GQLGDGT R P +V L V++++ G + A+ DGT
Sbjct: 99 ADGTLWTWGGNPYGQLGDGTTTARALPVQVAGLSG--VRAVATGLGHSLAL----RADGT 152
Query: 139 ISTSRLWVWGQNQGSNFPRLFWGA----FTPNTI-----ICQVSCGSVHVVALSECGLLQ 189
+ W WG NQ F +L G TP I + V+ G H + + + +
Sbjct: 153 V-----WAWGLNQ---FGQLGDGTTSQWLTPRPIPGLSGVRSVAAGGFHSLVVRDDDTVW 204
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
AWG N+YG+LG G T PR I P L + V+ G YHS AV +G +
Sbjct: 205 AWGSNDYGELGDGSTSRRAV-PRAI----------PGLRNVASVAGGCYHSLAVHADGTL 253
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
WGL S GQLG + PR V L G ++ VA HS AL ++G ++AWG
Sbjct: 254 SAWGLNSYGQLGDGTFS---NRATPRPVPGLSG--VRCVATSFFHSLALRAEGTVWAWGL 308
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGW 369
+ G+ G G +R +S T R +P L +GV VA G H+L +G + W
Sbjct: 309 NGYGEQGDGTASR-------QSPTP-RPVPGL---SGVLSVATGTFHSLAVNTNGTVSAW 357
Query: 370 GYNSYGQAANEKSTYAWYPSPV 391
G+N GQ + +T+ P V
Sbjct: 358 GHNGQGQLGDGTATHRSTPVTV 379
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 123/378 (32%), Positives = 169/378 (44%), Gaps = 57/378 (15%)
Query: 41 RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEE 100
R++ P+ PP AG R + ++ G H+ AV +DG+++ WGA+ G +G
Sbjct: 15 REVERPRSAPPL---GRAGEGPR-VPLSAGDSHSLAVHADGSVWAWGASASGLREEGALS 70
Query: 101 GRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFW 160
R P V L S+ V + GAH A A DGT LW WG N + +L
Sbjct: 71 RRFAPVPVPGL-SDIVSVAAGGAHSLAVRA-----DGT-----LWTWGGNP---YGQLGD 116
Query: 161 GAFTPNTIICQ---------VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
G T + Q V+ G H +AL G + AWG N++GQLG G T + L P
Sbjct: 117 GTTTARALPVQVAGLSGVRAVATGLGHSLALRADGTVWAWGLNQFGQLGDGTTSQWLT-P 175
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
R I P L + V+ G +HS V ++ V+ WG G+LG S +
Sbjct: 176 RPI----------PGLSGVRSVAAGGFHSLVVRDDDTVWAWGSNDYGELGDGSTS---RR 222
Query: 272 LLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNES 331
+PR + L + VA G HS A+ + G L AWG + GQLG G T S P
Sbjct: 223 AVPRAIPGLRN--VASVAGGCYHSLAVHADGTLSAWGLNSYGQLGDG--TFSNRATP--- 275
Query: 332 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYG-QAANEKSTYAWYPSP 390
R +P L +GV+ VA H+L +G + WG N YG Q S + P P
Sbjct: 276 ----RPVPGL---SGVRCVATSFFHSLALRAEGTVWAWGLNGYGEQGDGTASRQSPTPRP 328
Query: 391 VDWCVGEVRKLAAGGGHS 408
V G V +A G HS
Sbjct: 329 VPGLSG-VLSVATGTFHS 345
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 94/197 (47%), Gaps = 21/197 (10%)
Query: 218 AKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV 277
A L A E ++ +S G+ HS AV +G V+ WG + G +L + P V
Sbjct: 23 APPLGRAGEGPRV-PLSAGDSHSLAVHADGSVWAWGASASGLREEGALS---RRFAPVPV 78
Query: 278 VALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRN 337
L I VA GG HS A+ + G L+ WGG+ GQLG + T R
Sbjct: 79 PGLSDIV--SVAAGGAHSLAVRADGTLWTWGGNPYGQLG-------------DGTTTARA 123
Query: 338 IPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG 396
+P+ V +GV+ VA G H+L DG + WG N +GQ + ++ P P+ G
Sbjct: 124 LPVQVAGLSGVRAVATGLGHSLALRADGTVWAWGLNQFGQLGDGTTSQWLTPRPIPGLSG 183
Query: 397 EVRKLAAGGGHSAVLAD 413
VR +AAGG HS V+ D
Sbjct: 184 -VRSVAAGGFHSLVVRD 199
>gi|410975285|ref|XP_003994063.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
[Felis catus]
Length = 621
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 187/403 (46%), Gaps = 52/403 (12%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLLGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
I C+ P++IK QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 IDCKKQASPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYP----SPVDWCVGE---VRKLAAGGGHS 408
+N KS + W+P P D E V+++ +GG S
Sbjct: 332 TSNRKSPFTVKGNWFPYNGQCPPDIDSEEYFCVKRIFSGGDQS 374
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGIDCKKQAS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 125/256 (48%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG G + + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GIDCKKQASPQLIKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+++ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A + G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGST-SNRKSPFTVKG 343
>gi|338530520|ref|YP_004663854.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
gi|337256616|gb|AEI62776.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
Length = 1457
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 130/399 (32%), Positives = 180/399 (45%), Gaps = 60/399 (15%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A++ WG N GQ G P+Q+P EL A +A G + + AV G
Sbjct: 1020 AVWTWGDNTLGQLGDGTSAPTWMWPRQVP-ELRDVEA--------VAAGEQFSVAVLVGG 1070
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF---VKSISCGA-HCTAAIAEPRENDG 137
WG+NE+GQLGDG R P +V+ S+ V+++ A H A +A DG
Sbjct: 1071 GAHAWGSNEYGQLGDGKTGPRLTPVQVRIEASKLRQPVRTVRAWAQHAVALMA-----DG 1125
Query: 138 TISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
T+ WG N G+ R T + VS G+ H +AL G + AW
Sbjct: 1126 TVQ-----AWGDNAHGQLGDGTTERRAAPVVVRGLTGVVAVSTGAWHSLALRSDGTVWAW 1180
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G N +GQLG G T RV L+K+ + G YH+ AV +G V+
Sbjct: 1181 GANGFGQLGDGTTLSRTTPVRVAG-----------LQKVVAIGAGGYHALAVRSDGSVWA 1229
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG + GQLG + +S LLP RV L + VA G HS AL + G+L AWG +
Sbjct: 1230 WGYNAFGQLGDGTAES---RLLPVRVEGLSN--VTSVAGGDHHSLALLADGSLGAWGNNA 1284
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGY 371
AGQLG G T +S + + + + +GV V G +HTL DG + WG
Sbjct: 1285 AGQLGDGTGTTRYSRV------WVKGV------DGVVEVRAGAAHTLALRGDGTVWTWGD 1332
Query: 372 NSYGQ--AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
N++ Q A ++ + P PV G V + AG HS
Sbjct: 1333 NTHSQLGAGDDSTRTRIVPRPVPGLSG-VTAIGAGARHS 1370
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 128/402 (31%), Positives = 181/402 (45%), Gaps = 56/402 (13%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++ WG N +GQ G + R P + G + + +A G HT A
Sbjct: 465 VGADGTVWAWGRNAAGQLGDGSTRDRAR-----PVAVSGL-----TSVVAVATGGSHTMA 514
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DGT++ WG N GQLGDGT R P +V +L S V +++ G + + A+ D
Sbjct: 515 LRGDGTVWAWGYNALGQLGDGTTVDRLTPVRVARLDS--VVAVAAGTYFSMAL----RGD 568
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
GT+ W WG+ G RLF T + +V+ GS H +A+ G + A
Sbjct: 569 GTV-----WTWGEGFEGQVGDGGGVQRLFPVQVAGLTNVTRVAAGSAHALAVRGDGTVWA 623
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG N GQLG G + + +V P L IT VS G HS A+ +G V
Sbjct: 624 WGDNGEGQLGDGTWSDRFRPVQV-----------PGLTGITAVSGGRSHSMALHGDGSVR 672
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
WG GQLG + S + P V L G I+ + +H AL + G L WG +
Sbjct: 673 AWGYNGYGQLGDGTFTS---RVRPAVVPGLTG--IQALHPSHLHVLALHADGTLRGWGYN 727
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWG 370
+ GQLGLG +S P + R V +A G +HTL+ DG + WG
Sbjct: 728 RFGQLGLGAA--GWSSRPVQVRGLGR----------VDRLAVGRAHTLMVRPDGAVLAWG 775
Query: 371 YNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
N+ GQ + +T+ P V V VR +A+G HS LA
Sbjct: 776 ENASGQLGDGTTTHRAGPVLVR-GVPCVRSVASGVLHSLALA 816
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 115/367 (31%), Positives = 160/367 (43%), Gaps = 54/367 (14%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+ WG N SGQ G + P + G P + +A G H+ A+A DG
Sbjct: 770 AVLAWGENASGQLGDGTTTH-----RAGPVLVRGVPCVRS-----VASGVLHSLALACDG 819
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+++ WGAN GQLGDGT R P +V LQ + A +A DGT
Sbjct: 820 SVWAWGANGRGQLGDGTTASRVIPARVDGLQGAVAVAAGG-DASLALLA-----DGTA-- 871
Query: 142 SRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNE 195
W WG N GS R G + I V+ G H +A E G L AWG N
Sbjct: 872 ---WAWGANAHGQLGDGSTSDRAVPGQLKLPSNIMSVALGETHGLAAGEDGALWAWGANG 928
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
GQLG G T P +KG LE + VS G S AV ++G + WG
Sbjct: 929 SGQLGEGSTTPSPT-PVRVKG----------LEGVASVSAGRAFSLAVRQDGTAWAWGAN 977
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
GQLG + S + +P++V ++ ++ ++ G H AL GA++ WG + GQL
Sbjct: 978 PSGQLGDGTNHS---QRVPKQVTSVK--RVRAMSAGAHHVVALGEDGAVWTWGDNTLGQL 1032
Query: 316 GLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
G G ++ + R +P L V+ VA G ++ + G H WG N YG
Sbjct: 1033 GDGTSAPTW--------MWPRQVPEL---RDVEAVAAGEQFSVAVLVGGGAHAWGSNEYG 1081
Query: 376 QAANEKS 382
Q + K+
Sbjct: 1082 QLGDGKT 1088
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 116/366 (31%), Positives = 162/366 (44%), Gaps = 55/366 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A + WG N GQ G ER R + L G A ++ G H+ A
Sbjct: 1121 LMADGTVQAWGDNAHGQLGDGTTER--RAAPVVVRGLTGVVA--------VSTGAWHSLA 1170
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ SDGT++ WGAN FGQLGDGT R P +V LQ V +I G + A+ +D
Sbjct: 1171 LRSDGTVWAWGANGFGQLGDGTTLSRTTPVRVAGLQK--VVAIGAGGYHALAV----RSD 1224
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
G++ W WG N G+ RL + + V+ G H +AL G L A
Sbjct: 1225 GSV-----WAWGYNAFGQLGDGTAESRLLPVRVEGLSNVTSVAGGDHHSLALLADGSLGA 1279
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG N GQLG G R + + K +D + +V G H+ A+ +G V+
Sbjct: 1280 WGNNAAGQLGDGTGTT-----RYSRVWVKGVD------GVVEVRAGAAHTLALRGDGTVW 1328
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
TWG + QLG S ++PR V L G + + G HS A+ KG ++AWG +
Sbjct: 1329 TWGDNTHSQLG-AGDDSTRTRIVPRPVPGLSG--VTAIGAGARHSFAVGPKGTVWAWGRN 1385
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG-VQLVACGHSHTLVYMRDGRIHGW 369
GQLGLG D R P+ V V +V+ G +L RDG + W
Sbjct: 1386 SHGQLGLG-------------DNANRAEPLRVKELAEVSVVSGGADFSLAMQRDGTVSSW 1432
Query: 370 GYNSYG 375
G + +G
Sbjct: 1433 GSSLHG 1438
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 125/413 (30%), Positives = 178/413 (43%), Gaps = 70/413 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLP-PELFGCPAGANSRWLDIACGHEHTA 75
+ A++ WG N SGQ G + Q P LP P + + G H+
Sbjct: 64 VSPTGAVWAWGGNTSGQLGGEATPLQRLAPAPLPSPRDI----------VSVVSGEAHSL 113
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
A+ GT++ WG N GQLGDGT R P +V L V +++ G + A+
Sbjct: 114 ALDEAGTVWAWGGNSSGQLGDGTTTDRVTPMQVAGLTD--VVAVAAGDFHSLAL----RG 167
Query: 136 DGTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSE 184
DGT+ W WG N +G P L TP + + ++ G +A+ +
Sbjct: 168 DGTV-----WAWGTNFHGQLGRGHTEPGL-----TPEPVPGLEGVVALAAGFDFTLAVMD 217
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G ++AWG N GQLG G + L P E + I+ V+ G YH+ A+
Sbjct: 218 DGTVRAWGANSSGQLGDGTFTQRLA-PV----------EVAHISGISAVTAGTYHAVALG 266
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
++G V+TWG S GQLG + +P RV L+ +K VA S AL G++
Sbjct: 267 KDGGVWTWGANSSGQLGDGAWS---DRAVPARVPGLE--RVKAVASMDASSLALLEAGSV 321
Query: 305 YAWGGSQAGQLG-LGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 363
AWG + +GQLG G R+ P E +P L V V G H L D
Sbjct: 322 LAWGANGSGQLGDSGTDDRA---TPGE-------VPGL---RSVAAVVGGAQHALALRGD 368
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLADAC 415
G + WG GQ + S P+P+ + +V +AAG HS A L D
Sbjct: 369 GTLWAWGGGLAGQLGHGGSERHVVPAPL-LRLADVASMAAGSFHSLAALGDGT 420
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 160/366 (43%), Gaps = 62/366 (16%)
Query: 24 YVWGYNHSGQTGRKGRERQLRIPKQLPPEL--FGCPAGANSRWLDIACGHEHTAAVASDG 81
+ WG N GQ G G+ P Q+ E P W +H A+ +DG
Sbjct: 1073 HAWGSNEYGQLG-DGKTGPRLTPVQVRIEASKLRQPVRTVRAWA------QHAVALMADG 1125
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
T+ WG N GQLGDGT E R P V+ L V ++S GA + A+ +DGT+
Sbjct: 1126 TVQAWGDNAHGQLGDGTTERRAAPVVVRGLTG--VVAVSTGAWHSLAL----RSDGTV-- 1177
Query: 142 SRLWVWGQN------QGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECGLLQA 190
W WG N G+ R TP + + + G H +A+ G + A
Sbjct: 1178 ---WAWGANGFGQLGDGTTLSRT-----TPVRVAGLQKVVAIGAGGYHALAVRSDGSVWA 1229
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WGYN +GQLG G T E P ++G L +T V+ G++HS A+ +G +
Sbjct: 1230 WGYNAFGQLGDG-TAESRLLPVRVEG----------LSNVTSVAGGDHHSLALLADGSLG 1278
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
WG + GQLG +G V +DG+ +V G H+ AL G ++ WG +
Sbjct: 1279 AWGNNAAGQLGDG---TGTTRYSRVWVKGVDGVV--EVRAGAAHTLALRGDGTVWTWGDN 1333
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWG 370
QLG G + ++P R +P L +GV + G H+ G + WG
Sbjct: 1334 THSQLGAGDDSTRTRIVP-------RPVPGL---SGVTAIGAGARHSFAVGPKGTVWAWG 1383
Query: 371 YNSYGQ 376
NS+GQ
Sbjct: 1384 RNSHGQ 1389
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 116/395 (29%), Positives = 168/395 (42%), Gaps = 56/395 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ GR E L P+ +P L G A +A G + T AV DGT
Sbjct: 171 VWAWGTNFHGQLGRGHTEPGL-TPEPVP-GLEGVVA--------LAAGFDFTLAVMDDGT 220
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ WGAN GQLGDGT R P +V + + +++ G + A+ + DG +
Sbjct: 221 VRAWGANSSGQLGDGTFTQRLAPVEVAHISG--ISAVTAGTYHAVALGK----DGGV--- 271
Query: 143 RLWVWGQNQGSNFPRLFWG-----AFTPNT-IICQVSCGSVHVVALSECGLLQAWGYNEY 196
W WG N W A P + V+ +AL E G + AWG N
Sbjct: 272 --WTWGANSSGQLGDGAWSDRAVPARVPGLERVKAVASMDASSLALLEAGSVLAWGANGS 329
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG T + R G E P L + V G H+ A+ +G ++ WG G
Sbjct: 330 GQLGDSGTDD-----RATPG------EVPGLRSVAAVVGGAQHALALRGDGTLWAWGGGL 378
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
GQLGH ++ ++P ++ L + +A G HS A G +++WG + GQLG
Sbjct: 379 AGQLGHGG---SERHVVPAPLLRL--ADVASMAAGSFHSLAALGDGTVWSWGRNTYGQLG 433
Query: 317 LGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
G + + E + R + A GH H+L DG + WG N+ GQ
Sbjct: 434 DGTTAERHAAVRVEGLSGIRGV-----------AASGH-HSLAVGADGTVWAWGRNAAGQ 481
Query: 377 AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
+ + P V + V +A GG H+ L
Sbjct: 482 LGDGSTRDRARPVAVS-GLTSVVAVATGGSHTMAL 515
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 121/405 (29%), Positives = 172/405 (42%), Gaps = 76/405 (18%)
Query: 23 IYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++ WG N GQ G ER + + + G A GH H+ AV +DG
Sbjct: 421 VWSWGRNTYGQLGDGTTAERHAAVRVEGLSGIRGV----------AASGH-HSLAVGADG 469
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
T++ WG N GQLGDG+ R P V L S V +++ G T A+ DGT+
Sbjct: 470 TVWAWGRNAAGQLGDGSTRDRARPVAVSGLTS--VVAVATGGSHTMAL----RGDGTV-- 521
Query: 142 SRLWVWGQN------QGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECGLLQA 190
W WG N G+ RL TP + + V+ G+ +AL G +
Sbjct: 522 ---WAWGYNALGQLGDGTTVDRL-----TPVRVARLDSVVAVAAGTYFSMALRGDGTVWT 573
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAK--FLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG EG +G G + F + L +T+V+ G H+ AV +G
Sbjct: 574 WG-------------EGFEGQVGDGGGVQRLFPVQVAGLTNVTRVAAGSAHALAVRGDGT 620
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
V+ WG GQLG + P +V L G I V+ G HS AL G++ AWG
Sbjct: 621 VWAWGDNGEGQLGDGTWS---DRFRPVQVPGLTG--ITAVSGGRSHSMALHGDGSVRAWG 675
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP--NGVQLVACGHSHTLVYMRDGRI 366
+ GQLG G T+ + VVP G+Q + H H L DG +
Sbjct: 676 YNGYGQLGDG--------------TFTSRVRPAVVPGLTGIQALHPSHLHVLALHADGTL 721
Query: 367 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
GWGYN +GQ + ++ P V +G V +LA G H+ ++
Sbjct: 722 RGWGYNRFGQLGLGAAGWSSRPVQVR-GLGRVDRLAVGRAHTLMV 765
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 157/374 (41%), Gaps = 83/374 (22%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+A G H AV DGT++ WG N GQLGDGT R P +V L + ++S G +
Sbjct: 605 VAAGSAHALAVRGDGTVWAWGDNGEGQLGDGTWSDRFRPVQVPGLTG--ITAVSGGRSHS 662
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPN---------TIICQVSCGSV 177
A+ DG++ WG N + +L G FT T I + +
Sbjct: 663 MAL----HGDGSVR-----AWGYN---GYGQLGDGTFTSRVRPAVVPGLTGIQALHPSHL 710
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HV+AL G L+ WGYN +GQLG G G++ + L ++ +++ G
Sbjct: 711 HVLALHADGTLRGWGYNRFGQLGLGA-----------AGWSSRPVQVRGLGRVDRLAVGR 759
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
H+ V +G V WG + GQLG + +L R V ++ VA G +HS A
Sbjct: 760 AHTLMVRPDGAVLAWGENASGQLGDGTTTHRAGPVLVRGVPC-----VRSVASGVLHSLA 814
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESD------------------------- 332
L G+++AWG + GQLG G T + +IP D
Sbjct: 815 LACDGSVWAWGANGRGQLGDG--TTASRVIPARVDGLQGAVAVAAGGDASLALLADGTAW 872
Query: 333 --------------TYFRNIP-ILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
T R +P L +P+ + VA G +H L DG + WG N GQ
Sbjct: 873 AWGANAHGQLGDGSTSDRAVPGQLKLPSNIMSVALGETHGLAAGEDGALWAWGANGSGQL 932
Query: 378 ANEKSTYAWYPSPV 391
+T + P+PV
Sbjct: 933 GEGSTTPS--PTPV 944
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 113/380 (29%), Positives = 156/380 (41%), Gaps = 56/380 (14%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A + WGYN GQ G R P ++ G R +A G HT V
Sbjct: 717 ADGTLRGWGYNRFGQLGLGAAGWSSR-----PVQVRGL-----GRVDRLAVGRAHTLMVR 766
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG + WG N GQLGDGT R P V+ + V+S++ G + A+A DG+
Sbjct: 767 PDGAVLAWGENASGQLGDGTTTHRAGPVLVRGV--PCVRSVASGVLHSLALA----CDGS 820
Query: 139 ISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
+ W WG N G+ R+ V+ G +AL G AWG
Sbjct: 821 V-----WAWGANGRGQLGDGTTASRVIPARVDGLQGAVAVAAGGDASLALLADGTAWAWG 875
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
N +GQLG G T + R + G K I V+ GE H A E+G ++ W
Sbjct: 876 ANAHGQLGDGSTSD-----RAVPGQLKLP------SNIMSVALGETHGLAAGEDGALWAW 924
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G GQLG S P RV L+G+ V+ G S A+ G +AWG + +
Sbjct: 925 GANGSGQLGEGSTT---PSPTPVRVKGLEGV--ASVSAGRAFSLAVRQDGTAWAWGANPS 979
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYN 372
GQLG G T +P + + R V+ ++ G H + DG + WG N
Sbjct: 980 GQLGDG--TNHSQRVPKQVTSVKR----------VRAMSAGAHHVVALGEDGAVWTWGDN 1027
Query: 373 SYGQAANEKSTYAW-YPSPV 391
+ GQ + S W +P V
Sbjct: 1028 TLGQLGDGTSAPTWMWPRQV 1047
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 131/453 (28%), Positives = 189/453 (41%), Gaps = 66/453 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N SGQ G G +P ++P R +A + A+ G+
Sbjct: 271 VWTWGANSSGQLG-DGAWSDRAVPARVP---------GLERVKAVASMDASSLALLEAGS 320
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ WGAN GQLGD + R P +V L+S V ++ GA A+ DGT
Sbjct: 321 VLAWGANGSGQLGDSGTDDRATPGEVPGLRS--VAAVVGGAQHALAL----RGDGT---- 370
Query: 143 RLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
LW WG G + + + ++ GS H +A G + +WG N Y
Sbjct: 371 -LWAWGGGLAGQLGHGGSERHVVPAPLLRLADVASMAAGSFHSLAALGDGTVWSWGRNTY 429
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG G T E RV L I V+ +HS AV +G V+ WG +
Sbjct: 430 GQLGDGTTAERHAAVRV-----------EGLSGIRGVAASGHHSLAVGADGTVWAWGRNA 478
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIF-IKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
GQLG S + D+ R VA+ G+ + VA GG H+ AL G ++AWG + GQL
Sbjct: 479 AGQLGDGSTR--DRA----RPVAVSGLTSVVAVATGGSHTMALRGDGTVWAWGYNALGQL 532
Query: 316 GLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
G + T R P+ V + V VA G ++ DG + WG
Sbjct: 533 G-------------DGTTVDRLTPVRVARLDSVVAVAAGTYFSMALRGDGTVWTWGEGFE 579
Query: 375 GQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLADAC--SLKELCEFRLAESVTL 431
GQ + +P V + V ++AAG H+ AV D + + E +L + T
Sbjct: 580 GQVGDGGGVQRLFPVQVA-GLTNVTRVAAGSAHALAVRGDGTVWAWGDNGEGQLGDG-TW 637
Query: 432 SNASEIEDVASRTGSEALARLCERLREHSLHGD 464
S+ V TG A++ R +LHGD
Sbjct: 638 SDRFRPVQVPGLTGITAVS--GGRSHSMALHGD 668
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 135/310 (43%), Gaps = 57/310 (18%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G + + P + G + + I G H AV SDG+
Sbjct: 1177 VWAWGANGFGQLGDG-----TTLSRTTPVRVAGL-----QKVVAIGAGGYHALAVRSDGS 1226
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAI------------A 130
++ WG N FGQLGDGT E R P +V+ L + V S++ G H + A+ A
Sbjct: 1227 VWAWGYNAFGQLGDGTAESRLLPVRVEGLSN--VTSVAGGDHHSLALLADGSLGAWGNNA 1284
Query: 131 EPRENDGTIST--SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ DGT +T SR+WV G + + +V G+ H +AL G +
Sbjct: 1285 AGQLGDGTGTTRYSRVWVKGVDG-----------------VVEVRAGAAHTLALRGDGTV 1327
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG N + QLG G + R++ P L +T + G HS AV G
Sbjct: 1328 WTWGDNTHSQLGAG---DDSTRTRIVP------RPVPGLSGVTAIGAGARHSFAVGPKGT 1378
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
V+ WG S GQLG L P RV L + + V+ G S A+ G + +WG
Sbjct: 1379 VWAWGRNSHGQLG---LGDNANRAEPLRVKELAEVSV--VSGGADFSLAMQRDGTVSSWG 1433
Query: 309 GSQAGQLGLG 318
S G LGLG
Sbjct: 1434 SSLHGALGLG 1443
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 141/343 (41%), Gaps = 59/343 (17%)
Query: 41 RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQL-GDGTE 99
R RI PP + IA G +H+ V+ G ++ WG N GQL G+ T
Sbjct: 41 RTQRITVTAPP-------------MRIAAGSQHSLYVSPTGAVWAWGGNTSGQLGGEATP 87
Query: 100 EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQ------GS 153
R P + + + V +S AH A + GT+ W WG N G+
Sbjct: 88 LQRLAPAPLPSPR-DIVSVVSGEAHSLAL-----DEAGTV-----WAWGGNSSGQLGDGT 136
Query: 154 NFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV 213
R+ T + V+ G H +AL G + AWG N +GQLGRG T GL
Sbjct: 137 TTDRVTPMQVAGLTDVVAVAAGDFHSLALRGDGTVWAWGTNFHGQLGRGHTEPGLT---- 192
Query: 214 IKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL 273
+ P LE + ++ G + AV ++G V WG S GQLG + + L
Sbjct: 193 -------PEPVPGLEGVVALAAGFDFTLAVMDDGTVRAWGANSSGQLGDGTFT---QRLA 242
Query: 274 PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDT 333
P V + G I V G H+ AL G ++ WG + +GQLG G S +P
Sbjct: 243 PVEVAHISG--ISAVTAGTYHAVALGKDGGVWTWGANSSGQLGDGAW--SDRAVPARVPG 298
Query: 334 YFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
R V+ VA + +L + G + WG N GQ
Sbjct: 299 LER----------VKAVASMDASSLALLEAGSVLAWGANGSGQ 331
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 102/242 (42%), Gaps = 28/242 (11%)
Query: 170 CQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK 229
+++ GS H + +S G + AWG N GQLG T P + P
Sbjct: 52 MRIAAGSQHSLYVSPTGAVWAWGGNTSGQLGGEATPLQRLAPAPL----------PSPRD 101
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
I V GE HS A+ E G V+ WG S GQLG + + P +V L + VA
Sbjct: 102 IVSVVSGEAHSLALDEAGTVWAWGGNSSGQLGDGTTT---DRVTPMQVAGLTDVVA--VA 156
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
G HS AL G ++AWG + GQLG G + P +P L GV
Sbjct: 157 AGDFHSLALRGDGTVWAWGTNFHGQLGRGHTEPGLTPEP---------VPGL---EGVVA 204
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
+A G TL M DG + WG NS GQ + T P V G + + AG H+
Sbjct: 205 LAAGFDFTLAVMDDGTVRAWGANSSGQLGDGTFTQRLAPVEVAHISG-ISAVTAGTYHAV 263
Query: 410 VL 411
L
Sbjct: 264 AL 265
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 108/253 (42%), Gaps = 40/253 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +++ WGYN GQ G E +L LP + G S +A G H+ A
Sbjct: 1221 VRSDGSVWAWGYNAFGQLGDGTAESRL-----LPVRVEGL-----SNVTSVAGGDHHSLA 1270
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ +DG+L WG N GQLGDGT R VK + + V + GA T A+ D
Sbjct: 1271 LLADGSLGAWGNNAAGQLGDGTGTTRYSRVWVKGV--DGVVEVRAGAAHTLAL----RGD 1324
Query: 137 GTISTSRLWVWGQNQGSNF--------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
GT+ W WG N S R+ + + + G+ H A+ G +
Sbjct: 1325 GTV-----WTWGDNTHSQLGAGDDSTRTRIVPRPVPGLSGVTAIGAGARHSFAVGPKGTV 1379
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
AWG N +GQLG G + RV EL +++ VS G S A+ +G
Sbjct: 1380 WAWGRNSHGQLGLGDNANRAEPLRV-----------KELAEVSVVSGGADFSLAMQRDGT 1428
Query: 249 VYTWGLGSVGQLG 261
V +WG G LG
Sbjct: 1429 VSSWGSSLHGALG 1441
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 86/202 (42%), Gaps = 32/202 (15%)
Query: 208 LQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG--HCSL 265
L+ PR + + AP + +++ G HS VS G V+ WG + GQLG L
Sbjct: 34 LEQPRAAR-TQRITVTAPPM----RIAAGSQHSLYVSPTGAVWAWGGNTSGQLGGEATPL 88
Query: 266 QSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRS 323
Q L PR +V+ V G HS AL G ++AWGG+ +GQLG G T
Sbjct: 89 QRLAPAPLPSPRDIVS--------VVSGEAHSLALDEAGTVWAWGGNSSGQLGDGTTTD- 139
Query: 324 FSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKS 382
R P+ V V VA G H+L DG + WG N +GQ +
Sbjct: 140 ------------RVTPMQVAGLTDVVAVAAGDFHSLALRGDGTVWAWGTNFHGQLGRGHT 187
Query: 383 TYAWYPSPVDWCVGEVRKLAAG 404
P PV G V LAAG
Sbjct: 188 EPGLTPEPVPGLEGVV-ALAAG 208
>gi|326509355|dbj|BAJ91594.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518534|dbj|BAJ88296.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 442
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 174/359 (48%), Gaps = 45/359 (12%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
I+ G H+AA+ S + +WG E GQLG G E R P + V S+ CGA T
Sbjct: 26 ISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVICGADHT 85
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTIIC-------QVSCG 175
A ++ +L+ WG +F RL G F P I+ Q++CG
Sbjct: 86 IAYSD--------DEMQLYSWGWG---DFGRLGHGNSSDVFNPQPIVALQGMKIKQIACG 134
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
H + ++ G + +WG N+ GQLG G + L P+ IK + + ++
Sbjct: 135 DSHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLL-PQKIKAFEGVC--------VKMIAA 185
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
G H+ A++E G++Y WG G G LG L D +P +V +++G + VACG HS
Sbjct: 186 GAEHTTAITEGGDLYGWGWGRYGNLG---LSDRDDRSVPEKVSSVEGEKMVLVACGWRHS 242
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS 355
+++S GALY +G S+ GQLG G L+P + + +++PI ++ G
Sbjct: 243 VSVSSSGALYTYGWSKYGQLGHG--DFQDHLVPRKLEA-LKDVPI-------SQISGGWR 292
Query: 356 HTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLAD 413
HT+ DG+++GWG+N +GQ E + P V++ + + ++A G H+ L +
Sbjct: 293 HTMAVAEDGKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTE 351
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 159/353 (45%), Gaps = 34/353 (9%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT-LF 84
WG GQ G G +P L F P R + CG +HT A + D L+
Sbjct: 45 WGRGEDGQLGH-GDSEDRPVPTVLTS--FDVP-----RVTSVICGADHTIAYSDDEMQLY 96
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGTISTSR 143
+WG +FG+LG G +P+ + LQ +K I+CG +HC + + + +
Sbjct: 97 SWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGDSHCLTVTFNGQVHSWGRNQNG 156
Query: 144 LWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGI 203
G NQ S P+ AF + ++ G+ H A++E G L WG+ YG LG
Sbjct: 157 QLGLGNNQDSLLPQKI-KAFE-GVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGNLGLSD 214
Query: 204 TCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHC 263
+ +V + E EK+ V+CG HS +VS +G +YT+G GQLGH
Sbjct: 215 RDDRSVPEKV---------SSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQLGHG 265
Query: 264 SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRS 323
Q L+PR++ AL + I ++ G H+ A+ G LY WG ++ GQ+G+
Sbjct: 266 DFQD---HLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDNVDH 322
Query: 324 FSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
S + + F + +V VACG HTL + I WG + GQ
Sbjct: 323 CSPV----EVNFPDEQKIV------QVACGWRHTLALTENKNIFSWGRGASGQ 365
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 142/310 (45%), Gaps = 49/310 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG+ G+ G G + P+ + A + IACG H V +G
Sbjct: 95 LYSWGWGDFGRLGH-GNSSDVFNPQPIV-------ALQGMKIKQIACGDSHCLTVTFNGQ 146
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ +WG N+ GQLG G + P+K+K + VK I+ GA T AI E + G
Sbjct: 147 VHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYG----- 201
Query: 143 RLWVWGQ--------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
W WG+ + P ++ V+CG H V++S G L +G++
Sbjct: 202 --WGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVL--VACGWRHSVSVSSSGALYTYGWS 257
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+YGQLG G + L PR ++ L + P I+Q+S G H+ AV+E+G++Y WG
Sbjct: 258 KYGQLGHGDFQDHLV-PRKLEA----LKDVP----ISQISGGWRHTMAVAEDGKLYGWGW 308
Query: 255 GSVGQLG------HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
GQ+G HCS P V D I VACG H+ ALT +++WG
Sbjct: 309 NKFGQVGVEDNVDHCS---------PVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWG 359
Query: 309 GSQAGQLGLG 318
+GQLG G
Sbjct: 360 RGASGQLGHG 369
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 121/255 (47%), Gaps = 24/255 (9%)
Query: 165 PNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
P + +S G+ H AL ++ +WG E GQLG G E P V+ +
Sbjct: 19 PEQSVILISAGANHSAALLSGQMVCSWGRGEDGQLGHG-DSEDRPVPTVLTSF------- 70
Query: 225 PELEKITQVSCGEYHSAAVSEN-GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
++ ++T V CG H+ A S++ ++Y+WG G G+LGH + P+ +VAL G+
Sbjct: 71 -DVPRVTSVICGADHTIAYSDDEMQLYSWGWGDFGRLGH---GNSSDVFNPQPIVALQGM 126
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
IK +ACG H +T G +++WG +Q GQLGLG SL+P + F +
Sbjct: 127 KIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLG--NNQDSLLPQKIKA-FEGVC---- 179
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 403
V+++A G HT G ++GWG+ YG P V GE L A
Sbjct: 180 ---VKMIAAGAEHTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVLVA 236
Query: 404 -GGGHSAVLADACSL 417
G HS ++ + +L
Sbjct: 237 CGWRHSVSVSSSGAL 251
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 92/199 (46%), Gaps = 20/199 (10%)
Query: 223 EAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVAL 280
EAPE + + +S G HSAA+ V +WG G GQLGH GD E +P + +
Sbjct: 17 EAPE-QSVILISAGANHSAALLSGQMVCSWGRGEDGQLGH-----GDSEDRPVPTVLTSF 70
Query: 281 DGIFIKDVACGGVHSCALT-SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIP 339
D + V CG H+ A + + LY+WG G+LG G N SD +
Sbjct: 71 DVPRVTSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHG----------NSSDVFNPQPI 120
Query: 340 ILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-V 398
+ + ++ +ACG SH L +G++H WG N GQ + + P + G V
Sbjct: 121 VALQGMKIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVCV 180
Query: 399 RKLAAGGGHSAVLADACSL 417
+ +AAG H+ + + L
Sbjct: 181 KMIAAGAEHTTAITEGGDL 199
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 10/90 (11%)
Query: 23 IYVWGYNHSGQTGRKGRERQLR-IPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG+N GQ G + + P E + + +ACG HT A+ +
Sbjct: 303 LYGWGWNKFGQVGVEDNVDHCSPVEVNFPDE---------QKIVQVACGWRHTLALTENK 353
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQL 111
+F+WG GQLG G R P+ + L
Sbjct: 354 NIFSWGRGASGQLGHGEIIDRNTPKMIDAL 383
>gi|340729980|ref|XP_003403270.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
terrestris]
Length = 1104
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 177/384 (46%), Gaps = 52/384 (13%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG G+ G G E ++ + +P E+ A S IACG +T +
Sbjct: 46 KEDMFCWGNTRHGELGLGGIEDEIIL---VPCEVDFKKA---SEIQQIACGENYTVVITH 99
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
DG +++ G N++GQLG E+GRK + + L + K +CGA+ T A+ E
Sbjct: 100 DGKIYSCGNNDYGQLGH--EQGRKRLQLILGLDAFVFKKAACGAYHTIAVNE-------- 149
Query: 140 STSRLWVWGQN-------QGSNF----PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+L+ WG N NF PR+ T +II Q++CG H +AL+ G L
Sbjct: 150 -WGQLFSWGSNSEGQLGLNSKNFMECSPRMVKTLGT--SIIVQIACGMKHALALTNNGEL 206
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG N GQLG G+ P++I A I ++CG YHS A+S++G
Sbjct: 207 YSWGSNSEGQLGLGVDIRCEMKPKLINTLAGV--------PIAFIACGGYHSIAISKSGA 258
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
++ WG + GQLG Q+ + LP ++ L + ACG S LT G ++ G
Sbjct: 259 IFGWGKNTFGQLGLNDTQNRN---LPYQLQTLRNAKVCYAACGEEFSVFLTVDGGVFTCG 315
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIH 367
GQLG G N ++ R + + ++ + V ++CG HTL + GR++
Sbjct: 316 AGMYGQLGHG---------SNNNEILPRQV-MELMGSTVTQISCGKRHTLALVPSQGRVY 365
Query: 368 GWGYNSYGQAANEKSTYAWYPSPV 391
WG GQ N + P V
Sbjct: 366 AWGLGGAGQLGNNSTRSTTTPQVV 389
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 161/346 (46%), Gaps = 52/346 (15%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+F WG G+LG G +E P +V ++ ++ I+CG + T I +DG I
Sbjct: 49 MFCWGNTRHGELGLGGIEDEIILVPCEVDFKKASEIQQIACGENYTVVIT----HDGKIY 104
Query: 141 TSRLWVWGQ---NQGSNFPRLFWG--AFTPNTIICQVSCGSVHVVALSECGLLQAWGYNE 195
+ +GQ QG +L G AF + + +CG+ H +A++E G L +WG N
Sbjct: 105 SCGNNDYGQLGHEQGRKRLQLILGLDAF----VFKKAACGAYHTIAVNEWGQLFSWGSNS 160
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
GQLG PR++K + I Q++CG H+ A++ NGE+Y+WG
Sbjct: 161 EGQLGLNSKNFMECSPRMVKTLGTSI--------IVQIACGMKHALALTNNGELYSWGSN 212
Query: 256 SVGQLG-----HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
S GQLG C E+ P+ + L G+ I +ACGG HS A++ GA++ WG +
Sbjct: 213 SEGQLGLGVDIRC-------EMKPKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGKN 265
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIP--ILVVPNG-VQLVACGHSHTLVYMRDGRIH 367
GQLGL +DT RN+P + + N V ACG ++ DG +
Sbjct: 266 TFGQLGL-------------NDTQNRNLPYQLQTLRNAKVCYAACGEEFSVFLTVDGGVF 312
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
G YGQ + + P V +G V +++ G H+ L
Sbjct: 313 TCGAGMYGQLGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALV 358
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 91/200 (45%), Gaps = 20/200 (10%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG N GQ G + I ++ P+L AG + IACG H+ A++ G
Sbjct: 206 LYSWGSNSEGQLGLG-----VDIRCEMKPKLINTLAGVPIAF--IACGGYHSIAISKSGA 258
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F WG N FGQLG + R P +++ L++ V +CG + + DG + T
Sbjct: 259 IFGWGKNTFGQLGLNDTQNRNLPYQLQTLRNAKVCYAACGEEFSVFLTV----DGGVFTC 314
Query: 143 RLWVWGQ-----NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC-GLLQAWGYNEY 196
++GQ N PR + + Q+SCG H +AL G + AWG
Sbjct: 315 GAGMYGQLGHGSNNNEILPRQVMELM--GSTVTQISCGKRHTLALVPSQGRVYAWGLGGA 372
Query: 197 GQLGRGITCEGLQGPRVIKG 216
GQLG T P+V++G
Sbjct: 373 GQLGNNST-RSTTTPQVVRG 391
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 58/132 (43%), Gaps = 16/132 (12%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I AI+ WG N GQ G + + +P QL N++ ACG E +
Sbjct: 253 ISKSGAIFGWGKNTFGQLGLNDTQNR-NLPYQLQ-------TLRNAKVCYAACGEEFSVF 304
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +FT GA +GQLG G+ P +V +L V ISCG T A+
Sbjct: 305 LTVDGGVFTCGAGMYGQLGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVP----- 359
Query: 137 GTISTSRLWVWG 148
S R++ WG
Sbjct: 360 ---SQGRVYAWG 368
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
+L K ++ WG ++ G+LGLG L+P E D F+ + +Q +ACG ++
Sbjct: 42 SLLKKEDMFCWGNTRHGELGLGGIEDEIILVPCEVD--FKK------ASEIQQIACGENY 93
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEK 381
T+V DG+I+ G N YGQ +E+
Sbjct: 94 TVVITHDGKIYSCGNNDYGQLGHEQ 118
>gi|326511771|dbj|BAJ92030.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 442
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 174/359 (48%), Gaps = 45/359 (12%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
I+ G H+AA+ S + +WG E GQLG G E R P + V S+ CGA T
Sbjct: 26 ISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVICGADHT 85
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTIIC-------QVSCG 175
A ++ +L+ WG +F RL G F P I+ Q++CG
Sbjct: 86 IAYSD--------DEMQLYSWGWG---DFGRLGHGNSSDVFNPQPIVALQGMKIKQIACG 134
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
H + ++ G + +WG N+ GQLG G + L P+ IK + + ++
Sbjct: 135 DSHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLL-PQKIKAFEGVC--------VKMIAA 185
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
G H+ A++E G++Y WG G G LG L D +P +V +++G + VACG HS
Sbjct: 186 GAEHTTAITEGGDLYGWGWGRYGNLG---LSDRDDRSVPEKVSSVEGEKMVLVACGWRHS 242
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS 355
+++S GALY +G S+ GQLG G L+P + + +++PI ++ G
Sbjct: 243 VSVSSSGALYTYGWSKYGQLGHG--DFQDHLVPRKLEA-LKDVPI-------SQISGGWR 292
Query: 356 HTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLAD 413
HT+ DG+++GWG+N +GQ E + P V++ + + ++A G H+ L +
Sbjct: 293 HTMAVAEDGKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTE 351
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 159/353 (45%), Gaps = 34/353 (9%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT-LF 84
WG GQ G G +P L F P R + CG +HT A + D L+
Sbjct: 45 WGRGEDGQLGH-GDSEDRPVPTVLTS--FDVP-----RVTSVICGADHTIAYSDDEMQLY 96
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGTISTSR 143
+WG +FG+LG G +P+ + LQ +K I+CG +HC + + + +
Sbjct: 97 SWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGDSHCLTVTFNGQVHSWGRNQNG 156
Query: 144 LWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGI 203
G NQ S P+ AF + ++ G+ H A++E G L WG+ YG LG
Sbjct: 157 QLGLGNNQDSLLPQKI-KAFE-GVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGNLGLSD 214
Query: 204 TCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHC 263
+ +V + E EK+ V+CG HS +VS +G +YT+G GQLGH
Sbjct: 215 RDDRSVPEKV---------SSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQLGHG 265
Query: 264 SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRS 323
Q L+PR++ AL + I ++ G H+ A+ G LY WG ++ GQ+G+
Sbjct: 266 DFQD---HLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDNVDH 322
Query: 324 FSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
S + + F + +V VACG HTL + I WG + GQ
Sbjct: 323 CSPV----EVNFPDEQKIV------QVACGWRHTLALTENKNIFSWGRGASGQ 365
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 142/310 (45%), Gaps = 49/310 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG+ G+ G G + P+ + A + IACG H V +G
Sbjct: 95 LYSWGWGDFGRLGH-GNSSDVFNPQPIV-------ALQGMKIKQIACGDSHCLTVTFNGQ 146
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ +WG N+ GQLG G + P+K+K + VK I+ GA T AI E + G
Sbjct: 147 VHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYG----- 201
Query: 143 RLWVWGQ--------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
W WG+ + P ++ V+CG H V++S G L +G++
Sbjct: 202 --WGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVL--VACGWRHSVSVSSSGALYTYGWS 257
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+YGQLG G + L PR ++ L + P I+Q+S G H+ AV+E+G++Y WG
Sbjct: 258 KYGQLGHGDFQDHLV-PRKLEA----LKDVP----ISQISGGWRHTMAVAEDGKLYGWGW 308
Query: 255 GSVGQLG------HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
GQ+G HCS P V D I VACG H+ ALT +++WG
Sbjct: 309 NKFGQVGVEDNVDHCS---------PVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWG 359
Query: 309 GSQAGQLGLG 318
+GQLG G
Sbjct: 360 RGASGQLGHG 369
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 121/255 (47%), Gaps = 24/255 (9%)
Query: 165 PNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
P + +S G+ H AL ++ +WG E GQLG G E P V+ +
Sbjct: 19 PEQSVILISAGANHSAALLSGQMVCSWGRGEDGQLGHG-DSEDRPVPTVLTSF------- 70
Query: 225 PELEKITQVSCGEYHSAAVSEN-GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
++ ++T V CG H+ A S++ ++Y+WG G G+LGH + P+ +VAL G+
Sbjct: 71 -DVPRVTSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHG---NSSDVFNPQPIVALQGM 126
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
IK +ACG H +T G +++WG +Q GQLGLG SL+P + F +
Sbjct: 127 KIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLG--NNQDSLLPQKIKA-FEGVC---- 179
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 403
V+++A G HT G ++GWG+ YG P V GE L A
Sbjct: 180 ---VKMIAAGAEHTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVLVA 236
Query: 404 -GGGHSAVLADACSL 417
G HS ++ + +L
Sbjct: 237 CGWRHSVSVSSSGAL 251
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 92/199 (46%), Gaps = 20/199 (10%)
Query: 223 EAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVAL 280
EAPE + + +S G HSAA+ V +WG G GQLGH GD E +P + +
Sbjct: 17 EAPE-QSVILISAGANHSAALLSGQMVCSWGRGEDGQLGH-----GDSEDRPVPTVLTSF 70
Query: 281 DGIFIKDVACGGVHSCALT-SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIP 339
D + V CG H+ A + + LY+WG G+LG G N SD +
Sbjct: 71 DVPRVTSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHG----------NSSDVFNPQPI 120
Query: 340 ILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-V 398
+ + ++ +ACG SH L +G++H WG N GQ + + P + G V
Sbjct: 121 VALQGMKIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVCV 180
Query: 399 RKLAAGGGHSAVLADACSL 417
+ +AAG H+ + + L
Sbjct: 181 KMIAAGAEHTTAITEGGDL 199
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 10/90 (11%)
Query: 23 IYVWGYNHSGQTGRKGRERQLR-IPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG+N GQ G + + P E + + +ACG HT A+ +
Sbjct: 303 LYGWGWNKFGQVGVEDNVDHCSPVEVNFPDE---------QKIVQVACGWRHTLALTENK 353
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQL 111
+F+WG GQLG G R P+ + L
Sbjct: 354 NIFSWGRGASGQLGHGEIIDRNTPKMIDAL 383
>gi|383852591|ref|XP_003701810.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Megachile rotundata]
Length = 1135
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 111/373 (29%), Positives = 175/373 (46%), Gaps = 36/373 (9%)
Query: 23 IYVWGYNHSGQTGRKGRERQ-LRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++ WG G+ G G E + + +P++L + + IACG +T + DG
Sbjct: 78 MFCWGSTIHGELGLGGIEDENILVPRELDFQ-------KATEIEQIACGENYTVLITRDG 130
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE--PRENDGTI 139
+++ G N++GQLG E+GRK + + L + K ++CGAH T A+ E + G+
Sbjct: 131 QVYSCGNNDYGQLGH--EKGRKRLQLIPGLDAFVFKKVACGAHHTLAVNEWGQLFSWGSN 188
Query: 140 STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
+ +L + +N P + T +++ QV+CG HV+AL+ G L +WG N GQL
Sbjct: 189 AEGQLGLNSKNLIECVPHMVRALGT--SVVVQVACGINHVLALTNNGKLYSWGSNSDGQL 246
Query: 200 GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ 259
G G + P++I A I ++CG YHS A+S++G V+ WG + GQ
Sbjct: 247 GLGTDVKNEIKPKLISSLAGV--------PIAFITCGGYHSMAISKSGAVFGWGKNTFGQ 298
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LG L LPR++ L + ACG S LT G ++ G GQLG G
Sbjct: 299 LG---LNDTRNRNLPRQLQTLQNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHG- 354
Query: 320 QTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTL-VYMRDGRIHGWGYNSYGQAA 378
N S+ + ++ + V ++CG HTL + GR++ WG GQ
Sbjct: 355 ---------NTSNEILPRQVMELMGSTVTQISCGKRHTLGLVPSRGRVYAWGLGGAGQLG 405
Query: 379 NEKSTYAWYPSPV 391
N + P V
Sbjct: 406 NNITRSVATPQVV 418
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 164/344 (47%), Gaps = 42/344 (12%)
Query: 76 AVASDGTLFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
+ +D +F WG+ G+LG G +E P ++ ++ ++ I+CG + T I
Sbjct: 71 STVTDKNMFCWGSTIHGELGLGGIEDENILVPRELDFQKATEIEQIACGENYTVLITR-- 128
Query: 134 ENDGTISTSRLWVWGQ---NQGSNFPRLFWG--AFTPNTIICQVSCGSVHVVALSECGLL 188
DG + + +GQ +G +L G AF + +V+CG+ H +A++E G L
Sbjct: 129 --DGQVYSCGNNDYGQLGHEKGRKRLQLIPGLDAF----VFKKVACGAHHTLAVNEWGQL 182
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG N GQLG L +I+ + A + QV+CG H A++ NG+
Sbjct: 183 FSWGSNAEGQLG-------LNSKNLIECVPHMV-RALGTSVVVQVACGINHVLALTNNGK 234
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
+Y+WG S GQLG + E+ P+ + +L G+ I + CGG HS A++ GA++ WG
Sbjct: 235 LYSWGSNSDGQLGLGT--DVKNEIKPKLISSLAGVPIAFITCGGYHSMAISKSGAVFGWG 292
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIP--ILVVPNG-VQLVACGHSHTLVYMRDGR 365
+ GQLGL +DT RN+P + + N V ACG ++ DG
Sbjct: 293 KNTFGQLGL-------------NDTRNRNLPRQLQTLQNAKVCYAACGEEFSVFLTVDGG 339
Query: 366 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHS 408
+ G YGQ + ++ P V +G V +++ G H+
Sbjct: 340 VFTCGAGMYGQLGHGNTSNEILPRQVMELMGSTVTQISCGKRHT 383
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 88/200 (44%), Gaps = 20/200 (10%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG N GQ G G + + I +L L G P I CG H+ A++ G
Sbjct: 235 LYSWGSNSDGQLGL-GTDVKNEIKPKLISSLAGVPIAF------ITCGGYHSMAISKSGA 287
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F WG N FGQLG R P +++ LQ+ V +CG + + DG + T
Sbjct: 288 VFGWGKNTFGQLGLNDTRNRNLPRQLQTLQNAKVCYAACGEEFSVFLTV----DGGVFTC 343
Query: 143 RLWVWGQNQGSN-----FPRLFWGAFTPNTIICQVSCGSVHVVALSEC-GLLQAWGYNEY 196
++GQ N PR + + Q+SCG H + L G + AWG
Sbjct: 344 GAGMYGQLGHGNTSNEILPRQVMELM--GSTVTQISCGKRHTLGLVPSRGRVYAWGLGGA 401
Query: 197 GQLGRGITCEGLQGPRVIKG 216
GQLG IT + P+V+ G
Sbjct: 402 GQLGNNIT-RSVATPQVVHG 420
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 56/132 (42%), Gaps = 16/132 (12%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I A++ WG N GQ G R +P+QL N++ ACG E +
Sbjct: 282 ISKSGAVFGWGKNTFGQLGLNDT-RNRNLPRQLQ-------TLQNAKVCYAACGEEFSVF 333
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +FT GA +GQLG G P +V +L V ISCG T + R
Sbjct: 334 LTVDGGVFTCGAGMYGQLGHGNTSNEILPRQVMELMGSTVTQISCGKRHTLGLVPSR--- 390
Query: 137 GTISTSRLWVWG 148
R++ WG
Sbjct: 391 -----GRVYAWG 397
>gi|224495959|ref|NP_001139096.1| probable E3 ubiquitin-protein ligase HERC3 [Danio rerio]
Length = 1046
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 113/322 (35%), Positives = 161/322 (50%), Gaps = 50/322 (15%)
Query: 22 AIYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
++Y G N GQ G KG R PEL G A + ++CG H+ AV
Sbjct: 54 SVYTCGSNSCGQLGHDKGGSR---------PELVG--ALDAQKISGVSCGQAHSLAVNEQ 102
Query: 81 GTLFTWGANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
G +F WGA + GQLG GT EE + P +K+L + + CG H A+++ DG
Sbjct: 103 GQVFAWGAGDGGQLGLGTAEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSK----DG-- 156
Query: 140 STSRLWVWGQNQGSNFPRLFWGAFTPNTI------------ICQVSCGSVHVVALSECGL 187
+L+VWG+N +L G P+T+ + Q+S G H ALS G
Sbjct: 157 ---QLFVWGENSSG---QLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGA 210
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ WG N GQLG + R + + KFL +K+ +SCGE H+AA+++ G
Sbjct: 211 VFGWGKNSAGQLGLND-----EQDRAVPCHIKFLRS----QKVVYISCGEEHTAALTKEG 261
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYA 306
++T+G GS GQLGH S E LPRRV+ L G + +ACG H+ A S G +YA
Sbjct: 262 GLFTFGNGSKGQLGH---DSTRNEPLPRRVMELMGTEVSQIACGRNHTLAFVPSTGLIYA 318
Query: 307 WGGSQAGQLGLGPQTRSFSLIP 328
+G + GQLG G + + S +P
Sbjct: 319 FGCNTQGQLGTGIRGSAKSPVP 340
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 126/442 (28%), Positives = 193/442 (43%), Gaps = 70/442 (15%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFT 85
WG + +GQ G E + P+ C ++ACG++H+ + DG+++T
Sbjct: 5 WGSSGAGQLGIGASEASVFEPR-------SCCVFDGRGLKEVACGNQHSLFLLHDGSVYT 57
Query: 86 WGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLW 145
G+N GQLG ++G PE V L ++ + +SCG + A+ E +++
Sbjct: 58 CGSNSCGQLGH--DKGGSRPELVGALDAQKISGVSCGQAHSLAVNE---------QGQVF 106
Query: 146 VWGQNQGSNF-----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
WG G PRL I QV CG+ H +ALS+ G L WG N
Sbjct: 107 AWGAGDGGQLGLGTAEEAVRVPRLIKKLCEHR--ISQVMCGNHHCIALSKDGQLFVWGEN 164
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
GQLG G P+ +K +TQ+S G HS A+S +G V+ WG
Sbjct: 165 SSGQLGLGKGEPSTLSPQPLKSLCGI--------PLTQISAGGDHSFALSFSGAVFGWGK 216
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
S GQLG L +P + L + ++CG H+ ALT +G L+ +G GQ
Sbjct: 217 NSAGQLG---LNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQ 273
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNS 373
LG TR+ L R + L+ Q+ ACG +HTL ++ G I+ +G N+
Sbjct: 274 LG-HDSTRNEPLP--------RRVMELMGTEVSQI-ACGRNHTLAFVPSTGLIYAFGCNT 323
Query: 374 YGQAANEKSTYAWYPSPVD----WCVGE---------VRKLAAGGGHSAVLADACS-LKE 419
GQ A P PV C+G + K+ +GG H+ +L L
Sbjct: 324 QGQLGTGIRGSAKSPVPVSNIQPLCIGNAYTRTEHCTIAKIHSGGDHNFLLLSTVEGLSC 383
Query: 420 LCEFRL---AESVTLSNASEIE 438
+FR+ +S+ L N+ ++
Sbjct: 384 PDDFRILNTTKSIALINSESLD 405
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 166/344 (48%), Gaps = 39/344 (11%)
Query: 83 LFTWGANEFGQLGDGTEEGRK-HPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+ WG++ GQLG G E P +K ++CG + + +DG++ T
Sbjct: 2 MLCWGSSGAGQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLL----HDGSVYT 57
Query: 142 ---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQ 198
+ G ++G + P L GA I VSCG H +A++E G + AWG + GQ
Sbjct: 58 CGSNSCGQLGHDKGGSRPELV-GALDAQK-ISGVSCGQAHSLAVNEQGQVFAWGAGDGGQ 115
Query: 199 LGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVG 258
LG G E ++ PR+IK + +I+QV CG +H A+S++G+++ WG S G
Sbjct: 116 LGLGTAEEAVRVPRLIKKLCE--------HRISQVMCGNHHCIALSKDGQLFVWGENSSG 167
Query: 259 QLGHCSLQSGDKELL-PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
QLG L G+ L P+ + +L GI + ++ GG HS AL+ GA++ WG + AGQLGL
Sbjct: 168 QLG---LGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPI---LVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
+E D R +P + V ++CG HT ++G + +G S
Sbjct: 225 N----------DEQD---RAVPCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSK 271
Query: 375 GQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
GQ ++ + P V +G EV ++A G H+ + L
Sbjct: 272 GQLGHDSTRNEPLPRRVMELMGTEVSQIACGRNHTLAFVPSTGL 315
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 110/236 (46%), Gaps = 40/236 (16%)
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPR---VIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
++ WG + GQLG G + + PR V G + +V+CG HS +
Sbjct: 1 MMLCWGSSGAGQLGIGASEASVFEPRSCCVFDG-----------RGLKEVACGNQHSLFL 49
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+G VYT G S GQLGH + G + P V ALD I V+CG HS A+ +G
Sbjct: 50 LHDGSVYTCGSNSCGQLGHD--KGGSR---PELVGALDAQKISGVSCGQAHSLAVNEQGQ 104
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVY 360
++AWG GQLGLG + +P L+ + + V CG+ H +
Sbjct: 105 VFAWGAGDGGQLGLGTAEEAV------------RVPRLIKKLCEHRISQVMCGNHHCIAL 152
Query: 361 MRDGRIHGWGYNSYGQ---AANEKSTYAWYPSPV-DWCVGEVRKLAAGGGHSAVLA 412
+DG++ WG NS GQ E ST + P P+ C + +++AGG HS L+
Sbjct: 153 SKDGQLFVWGENSSGQLGLGKGEPSTLS--PQPLKSLCGIPLTQISAGGDHSFALS 206
>gi|326518338|dbj|BAJ88198.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326519062|dbj|BAJ96530.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 441
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 159/321 (49%), Gaps = 44/321 (13%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++ G H+ A+ + L TWG E GQLG G E R P + + + S+ CGA T
Sbjct: 19 VSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICGADHT 78
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCG 175
A +E W WG +F RL G FTP + I Q++CG
Sbjct: 79 TAYSEDEHQ------VYSWGWG-----DFGRLGHGNSTDVFTPQPVKALQGIKIKQLACG 127
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
H +A++ G + +WG N+ GQLG G T + L P+ I+ + E + ++
Sbjct: 128 DSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLL-PQTIQAF--------EGISVKMIAA 178
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
G H+AAV+E+G++Y WG G G LG L + +P +V +++G + VACG H+
Sbjct: 179 GAEHTAAVTEDGDIYGWGWGRYGNLG---LGDRNDRFVPEKVSSVEGDKMVLVACGWRHT 235
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS 355
++S G+LY +G S+ GQLG G L+P++ + + + ++ G
Sbjct: 236 ITVSSSGSLYTYGWSKYGQLGHG--DFEDHLVPHKVEA--------LKDSSTSQISGGWR 285
Query: 356 HTLVYMRDGRIHGWGYNSYGQ 376
HT+ DG+++GWG+N +GQ
Sbjct: 286 HTMALTSDGKLYGWGWNKFGQ 306
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 161/368 (43%), Gaps = 50/368 (13%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A + + WG GQ G E +L +P + G A + + CG +HT A +
Sbjct: 31 AGNVLCTWGRGEDGQLGHGDAEDRL-----VPTVISGFDAPGITS---VICGADHTTAYS 82
Query: 79 SD-GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPREND 136
D +++WG +FG+LG G P+ VK LQ +K ++CG +HC A
Sbjct: 83 EDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLACGDSHCLAVTM------ 136
Query: 137 GTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
+ WG+NQ + P TI + ++ G+ H A++E G +
Sbjct: 137 ----AGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAAVTEDGDI 192
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG+ YG LG G + +V + E +K+ V+CG H+ VS +G
Sbjct: 193 YGWGWGRYGNLGLGDRNDRFVPEKV---------SSVEGDKMVLVACGWRHTITVSSSGS 243
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
+YT+G GQLGH + L+P +V AL ++ G H+ ALTS G LY WG
Sbjct: 244 LYTYGWSKYGQLGHGDFED---HLVPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWG 300
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHG 368
++ GQ+G G S P + N P V VACG HTL + +
Sbjct: 301 WNKFGQVGAGDNADHCS--PAQV-----NFP---EEQKVAQVACGWRHTLAFTEKKNVFA 350
Query: 369 WGYNSYGQ 376
WG + GQ
Sbjct: 351 WGRGTSGQ 358
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 149/337 (44%), Gaps = 68/337 (20%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG+ G+ G G + P+ + A + +ACG H AV G
Sbjct: 88 VYSWGWGDFGRLGH-GNSTDVFTPQPVK-------ALQGIKIKQLACGDSHCLAVTMAGE 139
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ +WG N+ GQLG GT E P+ ++ + VK I+ GA TAA+ E DG I
Sbjct: 140 VLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAAVTE----DGDIYG- 194
Query: 143 RLWVWGQ----NQGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
W WG+ G R F P + + V+CG H + +S G L +
Sbjct: 195 --WGWGRYGNLGLGDRNDR-----FVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTY 247
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G+++YGQLG G + L +V EA + +Q+S G H+ A++ +G++Y
Sbjct: 248 GWSKYGQLGHGDFEDHLVPHKV---------EALKDSSTSQISGGWRHTMALTSDGKLYG 298
Query: 252 WGLGSVGQLG------HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
WG GQ+G HCS P +V + + VACG H+ A T K ++
Sbjct: 299 WGWNKFGQVGAGDNADHCS---------PAQVNFPEEQKVAQVACGWRHTLAFTEKKNVF 349
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
AWG +GQLG G + RN P+++
Sbjct: 350 AWGRGTSGQLGHG-------------EIVDRNTPVII 373
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 89/196 (45%), Gaps = 21/196 (10%)
Query: 222 DEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVA 279
DEAP + VS G HS A+ + TWG G GQLGH GD E L+P +
Sbjct: 10 DEAPP--AVVLVSAGASHSVALLAGNVLCTWGRGEDGQLGH-----GDAEDRLVPTVISG 62
Query: 280 LDGIFIKDVACGGVHSCALT-SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
D I V CG H+ A + + +Y+WG G+LG G T F+ P ++ + I
Sbjct: 63 FDAPGITSVICGADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKA---LQGI 119
Query: 339 PILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-E 397
I + +ACG SH L G + WG N GQ + + P + G
Sbjct: 120 KI-------KQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGIS 172
Query: 398 VRKLAAGGGHSAVLAD 413
V+ +AAG H+A + +
Sbjct: 173 VKMIAAGAEHTAAVTE 188
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 34/92 (36%), Gaps = 8/92 (8%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG+N GQ G + PE + +ACG HT A
Sbjct: 296 LYGWGWNKFGQVGAGDNADHCSPAQVNFPE--------EQKVAQVACGWRHTLAFTEKKN 347
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSE 114
+F WG GQLG G R P + L +
Sbjct: 348 VFAWGRGTSGQLGHGEIVDRNTPVIIDALSPD 379
>gi|219847606|ref|YP_002462039.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
9485]
gi|219541865|gb|ACL23603.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
DSM 9485]
Length = 784
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 124/404 (30%), Positives = 175/404 (43%), Gaps = 67/404 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WGYN SGQ G + P + G P+G + IA G HT A+ S G
Sbjct: 81 VWCWGYNWSGQLGDGSYTD-----RSTPVAVSGLPSGVTA----IAAGGAHTCALTSSGG 131
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ WG N FGQLGDG+ R P V L S + GAH A +S+
Sbjct: 132 VMCWGGNYFGQLGDGSYTDRSTPVAVSGLPSGVTAIAAGGAHTCA----------LMSSG 181
Query: 143 RLWVWGQN---QGSNFPRLFWGAFTPNTI------ICQVSCGSVHVVALSECGLLQAWGY 193
+W WG N Q + ++ TP + + ++ G H AL+ G + WG
Sbjct: 182 GVWCWGYNLSGQLGDGSTIY--HITPVAVSGLPSEVTAIAAGYAHTCALTGSGGVWCWGD 239
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
N +GQLG G + P + G +T ++ G ++ A++ +G V+ WG
Sbjct: 240 NGFGQLGDGSFTDSST-PAAVGGLP---------SGVTAIAAGGRYTCALTSSGGVWCWG 289
Query: 254 LGSVGQLGHCSLQS----GDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
GQLG S + G LP V A +A GG H+CALTS G ++ WGG
Sbjct: 290 RNDSGQLGDGSFTNRSTPGAVGGLPSGVTA--------IAAGGAHTCALTSSGGVWCWGG 341
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGRIH 367
+ +GQLG G T R+ P V +P+GV +A G +HT G +
Sbjct: 342 NDSGQLGDGSYTD-------------RSTPGAVSGLPSGVTAIAAGGAHTCARTSSGGVW 388
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
WG N YGQ + +T P V V +AAG H+ L
Sbjct: 389 CWGGNFYGQLGDGTTTDRSTPGAVSGLPSGVTAIAAGNYHTCAL 432
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 124/412 (30%), Positives = 176/412 (42%), Gaps = 65/412 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + ++ WG N SGQ G + P + G P+G + IA G HT A
Sbjct: 279 LTSSGGVWCWGRNDSGQLGDGSFTN-----RSTPGAVGGLPSGVTA----IAAGGAHTCA 329
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ S G ++ WG N+ GQLGDG+ R P V L S + GAH A R +
Sbjct: 330 LTSSGGVWCWGGNDSGQLGDGSYTDRSTPGAVSGLPSGVTAIAAGGAHTCA-----RTSS 384
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFT--PNTIICQVSCGSVHVVALSECGLL 188
G + W WG N G+ R GA + P+ + ++ G+ H AL+ +
Sbjct: 385 GGV-----WCWGGNFYGQLGDGTTTDRSTPGAVSGLPSGVT-AIAAGNYHTCALTGSDGV 438
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG N YGQLG G T R G L +T ++ G YH+ A++ +G
Sbjct: 439 WCWGDNFYGQLGDGTTTN-----RSTPGAVSGLPSG-----VTAIAAGNYHTCALTSSGG 488
Query: 249 VYTWGLGSVGQLGHCSLQS----GDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
V+ WG GQLG + + G LP V A +A G H+CAL S G +
Sbjct: 489 VWCWGRNDSGQLGDGTTTNRSTPGAVGGLPSGVTA--------IAAGDYHTCALMSSGGV 540
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMR 362
+ WG + GQLG G T S + P+ V +P+GV +A G+ HT
Sbjct: 541 WCWGLNNRGQLGDGSYTDS-------------STPVAVGGLPSGVMAIAAGNYHTCALTG 587
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADA 414
+ WG NS GQ + +T P V V +AAG H+ L +
Sbjct: 588 SDGVWCWGTNSDGQLGDGTTTNRSTPVAVSGLPSGVTAIAAGNYHTCALTSS 639
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 120/410 (29%), Positives = 173/410 (42%), Gaps = 71/410 (17%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
+ ++ WG N GQ G + P + G P+G + IA G+ HT A+
Sbjct: 383 SSGGVWCWGGNFYGQLGDG-----TTTDRSTPGAVSGLPSGVTA----IAAGNYHTCALT 433
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
++ WG N +GQLGDGT R P V L S V +I+ G + T A+
Sbjct: 434 GSDGVWCWGDNFYGQLGDGTTTNRSTPGAVSGLPSG-VTAIAAGNYHTCAL--------- 483
Query: 139 ISTSRLWVWGQN------QGSNFPRLFWGAFTPNTI------ICQVSCGSVHVVALSECG 186
S+ +W WG+N G+ R TP + + ++ G H AL G
Sbjct: 484 TSSGGVWCWGRNDSGQLGDGTTTNR-----STPGAVGGLPSGVTAIAAGDYHTCALMSSG 538
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ WG N GQLG G + P + G + ++ G YH+ A++ +
Sbjct: 539 GVWCWGLNNRGQLGDGSYTDSST-PVAVGGLP---------SGVMAIAAGNYHTCALTGS 588
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGI--FIKDVACGGVHSCALTSKGA 303
V+ WG S GQL GD R VA+ G+ + +A G H+CALTS G
Sbjct: 589 DGVWCWGTNSDGQL-------GDGTTTNRSTPVAVSGLPSGVTAIAAGNYHTCALTSSGG 641
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYM 361
++ WG + +GQLG G T R+ P V +P+GV +A G HT
Sbjct: 642 VWCWGYNLSGQLGDGTTTN-------------RSTPGAVSGLPSGVTAIAAGDEHTCALT 688
Query: 362 RDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
G + WG N YGQ + +T P V V +AAG H+ L
Sbjct: 689 GSGGVWCWGDNYYGQLGDGTTTNRSTPGAVSGLPSGVTAIAAGVYHTCAL 738
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 170/392 (43%), Gaps = 71/392 (18%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ ++ WG N GQ G + P + G P+G + IA G+ HT A
Sbjct: 432 LTGSDGVWCWGDNFYGQLGDGTTTN-----RSTPGAVSGLPSGVTA----IAAGNYHTCA 482
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ S G ++ WG N+ GQLGDGT R P V L S V +I+ G + T A+
Sbjct: 483 LTSSGGVWCWGRNDSGQLGDGTTTNRSTPGAVGGLPSG-VTAIAAGDYHTCAL------- 534
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI----------ICQVSCGSVHVVALSECG 186
+S+ +W WG N N +L G++T ++ + ++ G+ H AL+
Sbjct: 535 --MSSGGVWCWGLN---NRGQLGDGSYTDSSTPVAVGGLPSGVMAIAAGNYHTCALTGSD 589
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ WG N GQLG G T P + G +T ++ G YH+ A++ +
Sbjct: 590 GVWCWGTNSDGQLGDGTTTN-RSTPVAVSGLP---------SGVTAIAAGNYHTCALTSS 639
Query: 247 GEVYTWGLGSVGQLGHCSLQS----GDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
G V+ WG GQLG + + G LP V A +A G H+CALT G
Sbjct: 640 GGVWCWGYNLSGQLGDGTTTNRSTPGAVSGLPSGVTA--------IAAGDEHTCALTGSG 691
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVY 360
++ WG + GQLG G T R+ P V +P+GV +A G HT
Sbjct: 692 GVWCWGDNYYGQLGDGTTTN-------------RSTPGAVSGLPSGVTAIAAGVYHTCAL 738
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVD 392
G + WG N GQ + + Y +PVD
Sbjct: 739 TGSGGVMCWGNNGDGQLGDGRPLY--RTTPVD 768
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 108/354 (30%), Positives = 151/354 (42%), Gaps = 52/354 (14%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
IA G HT A+ G ++ WG N GQLGDG+ R P V L S + GAH
Sbjct: 65 IAAGSWHTCALTGSGEVWCWGYNWSGQLGDGSYTDRSTPVAVSGLPSGVTAIAAGGAHTC 124
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI----------ICQVSCGS 176
A S+ + WG N F +L G++T + + ++ G
Sbjct: 125 A----------LTSSGGVMCWGGNY---FGQLGDGSYTDRSTPVAVSGLPSGVTAIAAGG 171
Query: 177 VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG 236
H AL G + WGYN GQLG G T + P + G ++T ++ G
Sbjct: 172 AHTCALMSSGGVWCWGYNLSGQLGDGSTIYHIT-PVAVSGLP---------SEVTAIAAG 221
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSC 296
H+ A++ +G V+ WG GQLG S P V L + +A GG ++C
Sbjct: 222 YAHTCALTGSGGVWCWGDNGFGQLGDGSFT---DSSTPAAVGGLP-SGVTAIAAGGRYTC 277
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLVACGH 354
ALTS G ++ WG + +GQLG G T R+ P V +P+GV +A G
Sbjct: 278 ALTSSGGVWCWGRNDSGQLGDGSFTN-------------RSTPGAVGGLPSGVTAIAAGG 324
Query: 355 SHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
+HT G + WG N GQ + T P V V +AAGG H+
Sbjct: 325 AHTCALTSSGGVWCWGGNDSGQLGDGSYTDRSTPGAVSGLPSGVTAIAAGGAHT 378
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 120/267 (44%), Gaps = 35/267 (13%)
Query: 153 SNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPR 212
S RL +F+P + ++ GS H AL+ G + WGYN GQLG G + P
Sbjct: 46 STTTRLHTSSFSPLQGVTAIAAGSWHTCALTGSGEVWCWGYNWSGQLGDGSYTD-RSTPV 104
Query: 213 VIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKEL 272
+ G +T ++ G H+ A++ +G V WG GQLG D
Sbjct: 105 AVSGLP---------SGVTAIAAGGAHTCALTSSGGVMCWGGNYFGQLG-------DGSY 148
Query: 273 LPRRV-VALDGI--FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPN 329
R VA+ G+ + +A GG H+CAL S G ++ WG + +GQLG
Sbjct: 149 TDRSTPVAVSGLPSGVTAIAAGGAHTCALMSSGGVWCWGYNLSGQLG------------- 195
Query: 330 ESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWY 387
+ T + P+ V +P+ V +A G++HT G + WG N +GQ + T +
Sbjct: 196 DGSTIYHITPVAVSGLPSEVTAIAAGYAHTCALTGSGGVWCWGDNGFGQLGDGSFTDSST 255
Query: 388 PSPVDWCVGEVRKLAAGGGHSAVLADA 414
P+ V V +AAGG ++ L +
Sbjct: 256 PAAVGGLPSGVTAIAAGGRYTCALTSS 282
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 128/325 (39%), Gaps = 53/325 (16%)
Query: 102 RKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG 161
R H LQ V +I+ G+ T A+ E +W WG N G
Sbjct: 50 RLHTSSFSPLQG--VTAIAAGSWHTCALTGSGE---------VWCWGYNWSGQLGD---G 95
Query: 162 AFTPNTI----------ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
++T + + ++ G H AL+ G + WG N +GQLG G + P
Sbjct: 96 SYTDRSTPVAVSGLPSGVTAIAAGGAHTCALTSSGGVMCWGGNYFGQLGDGSYTD-RSTP 154
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
+ G +T ++ G H+ A+ +G V+ WG GQLG S
Sbjct: 155 VAVSGLP---------SGVTAIAAGGAHTCALMSSGGVWCWGYNLSGQLGDGSTI---YH 202
Query: 272 LLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNES 331
+ P V L + +A G H+CALT G ++ WG + GQLG G T S
Sbjct: 203 ITPVAVSGLP-SEVTAIAAGYAHTCALTGSGGVWCWGDNGFGQLGDGSFTDS-------- 253
Query: 332 DTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPS 389
+ P V +P+GV +A G +T G + WG N GQ + T P
Sbjct: 254 -----STPAAVGGLPSGVTAIAAGGRYTCALTSSGGVWCWGRNDSGQLGDGSFTNRSTPG 308
Query: 390 PVDWCVGEVRKLAAGGGHSAVLADA 414
V V +AAGG H+ L +
Sbjct: 309 AVGGLPSGVTAIAAGGAHTCALTSS 333
>gi|117558047|gb|AAI27373.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
Length = 967
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 163/335 (48%), Gaps = 38/335 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P + ++ V+ + CG+ T + + DGT+
Sbjct: 1 MLCWGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G ++ P GA II VSCG H +AL++ G + +WG+ YG
Sbjct: 57 TCGCNDLGQLGHDKSRRKPEQV-GALDAQ-IIVAVSCGEAHTLALNDKGQVFSWGHAVYG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
Q+G E ++ PR IK + +I QV+CG +HS A+S++ ++++WG
Sbjct: 115 QIGLSTAEEYIRVPRNIKSLSDV--------QIVQVACGHHHSLALSKDSDIFSWGQNQY 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG L+ KE PR + +L GI +A GG HS ALT GA++ WG ++ GQLGL
Sbjct: 167 GQLG-LGLEI-KKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
+T RN+P L+ + + CG HT ++G + +G Y
Sbjct: 225 TDETD-------------RNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHS 408
GQ + + + P V +G V ++A G H+
Sbjct: 272 GQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHT 306
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/343 (31%), Positives = 163/343 (47%), Gaps = 66/343 (19%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ C N D+ CG HT V DGT++
Sbjct: 4 WGNTSFGQLGLGGIDEEVVLEPRR-------CDFFINKNVRDVGCGSRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRL 144
T G N+ GQLG ++ R+ PE+V L ++ + ++SCG T A+ + G + +
Sbjct: 57 TCGCNDLGQLGH--DKSRRKPEQVGALDAQIIVAVSCGEAHTLAL----NDKGQVFSWGH 110
Query: 145 WVWGQ---NQGSNFPRLFWGAFTPNTI-ICQVSCGSVHVVALSECGLLQAWGYNEYGQLG 200
V+GQ + + R+ + + + I QV+CG H +ALS+ + +WG N+YGQLG
Sbjct: 111 AVYGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLG 170
Query: 201 RGITCEGLQGPRVIK-----------------------------GYAKF-----LDE--- 223
G+ + PR IK G KF DE
Sbjct: 171 LGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDETDR 230
Query: 224 -APEL------EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRR 276
P L +KI + CGE H+AA+++ G V+T+G G GQLGH S + E+ PR+
Sbjct: 231 NVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGH---NSTNHEVNPRK 287
Query: 277 VVALDGIFIKDVACGGVHSCALT-SKGALYAWGGSQAGQLGLG 318
V L G + +ACG H+ A S G +Y++G GQLG G
Sbjct: 288 VFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 120/254 (47%), Gaps = 39/254 (15%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG+ GQ G E +R+P+ + + ++ + + +ACGH H+ A++
Sbjct: 102 KGQVFSWGHAVYGQIGLSTAEEYIRVPRNIK-------SLSDVQIVQVACGHHHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTEEGRK-HPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
D +F+WG N++GQLG G E ++ P +K L I+ G + A+ T
Sbjct: 155 DSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFAL--------T 206
Query: 139 ISTSRLWVWGQNQ----------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
IS + ++ WG+N+ N P L + I + CG H AL++ G +
Sbjct: 207 ISGA-IFGWGRNKFGQLGLTDETDRNVPALLKSLRSQKII--HICCGEDHTAALTKEGGV 263
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENG 247
+G YGQLG T + +V + +TQ++CG H+ A V +G
Sbjct: 264 FTFGAGGYGQLGHNSTNHEVNPRKVFELMGSI---------VTQIACGRQHTLAFVPSSG 314
Query: 248 EVYTWGLGSVGQLG 261
+Y++GLG GQLG
Sbjct: 315 RIYSFGLGGNGQLG 328
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 99/217 (45%), Gaps = 26/217 (11%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S I+ WG N GQ G L I K+ P +G + IA G H+ A+
Sbjct: 156 SDIFSWGQNQYGQLGLG-----LEIKKECAPRHIKSLSGIP--FAHIAAGGGHSFALTIS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGY 193
T +GQ N N PR + +I+ Q++CG H +A + G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTNHEVN-PRKVFELM--GSIVTQIACGRQHTLAFVPSSGRIYSFGL 321
Query: 194 NEYGQLGRGITCEGLQGPRVIKG----YAKFLDEAPE 226
GQLG G T + P +KG Y ++ PE
Sbjct: 322 GGNGQLGTGSTINR-KSPFTVKGNWLTYEDYVRHLPE 357
>gi|291404281|ref|XP_002718504.1| PREDICTED: hect domain and RLD 4 isoform 1 [Oryctolagus cuniculus]
Length = 1057
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 186/403 (46%), Gaps = 52/403 (12%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLLGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
I C+ P++IK QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 IDCKKQTSPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYPS----PVDWCVGE---VRKLAAGGGHS 408
+N KS + W P P D E V+++ +GG S
Sbjct: 332 TSNRKSPFTVKGNWLPYNGQCPPDIDSEEYFCVKRIFSGGDQS 374
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGIDCKKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 125/256 (48%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG G + + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GIDCKKQTSPQLIKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A + G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|191961780|ref|NP_001122122.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
[Xenopus (Silurana) tropicalis]
gi|189441713|gb|AAI67508.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
Length = 1049
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 163/335 (48%), Gaps = 38/335 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P + ++ V+ + CG+ T + + DGT+
Sbjct: 1 MLCWGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G ++ P GA II VSCG H +AL++ G + +WG+ YG
Sbjct: 57 TCGCNDLGQLGHDKSRRKPEQV-GALDAQ-IIVAVSCGEAHTLALNDKGQVFSWGHAVYG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
Q+G E ++ PR IK + +I QV+CG +HS A+S++ ++++WG
Sbjct: 115 QIGLSTAEEYIRVPRNIKSLSDV--------QIVQVACGHHHSLALSKDSDIFSWGQNQY 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG L+ KE PR + +L GI +A GG HS ALT GA++ WG ++ GQLGL
Sbjct: 167 GQLG-LGLEI-KKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
+T RN+P L+ + + CG HT ++G + +G Y
Sbjct: 225 TDETD-------------RNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHS 408
GQ + + + P V +G V ++A G H+
Sbjct: 272 GQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHT 306
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/343 (31%), Positives = 163/343 (47%), Gaps = 66/343 (19%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ C N D+ CG HT V DGT++
Sbjct: 4 WGNTSFGQLGLGGIDEEVVLEPRR-------CDFFINKNVRDVGCGSRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRL 144
T G N+ GQLG ++ R+ PE+V L ++ + ++SCG T A+ + G + +
Sbjct: 57 TCGCNDLGQLGH--DKSRRKPEQVGALDAQIIVAVSCGEAHTLAL----NDKGQVFSWGH 110
Query: 145 WVWGQ---NQGSNFPRLFWGAFTPNTI-ICQVSCGSVHVVALSECGLLQAWGYNEYGQLG 200
V+GQ + + R+ + + + I QV+CG H +ALS+ + +WG N+YGQLG
Sbjct: 111 AVYGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLG 170
Query: 201 RGITCEGLQGPRVIK-----------------------------GYAKF-----LDE--- 223
G+ + PR IK G KF DE
Sbjct: 171 LGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDETDR 230
Query: 224 -APEL------EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRR 276
P L +KI + CGE H+AA+++ G V+T+G G GQLGH S + E+ PR+
Sbjct: 231 NVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGH---NSTNHEVNPRK 287
Query: 277 VVALDGIFIKDVACGGVHSCALT-SKGALYAWGGSQAGQLGLG 318
V L G + +ACG H+ A S G +Y++G GQLG G
Sbjct: 288 VFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 120/254 (47%), Gaps = 39/254 (15%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG+ GQ G E +R+P+ + + ++ + + +ACGH H+ A++
Sbjct: 102 KGQVFSWGHAVYGQIGLSTAEEYIRVPRNIK-------SLSDVQIVQVACGHHHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTEEGRK-HPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
D +F+WG N++GQLG G E ++ P +K L I+ G + A+ T
Sbjct: 155 DSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFAL--------T 206
Query: 139 ISTSRLWVWGQNQ----------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
IS + ++ WG+N+ N P L + I + CG H AL++ G +
Sbjct: 207 ISGA-IFGWGRNKFGQLGLTDETDRNVPALLKSLRSQKII--HICCGEDHTAALTKEGGV 263
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENG 247
+G YGQLG T + +V + +TQ++CG H+ A V +G
Sbjct: 264 FTFGAGGYGQLGHNSTNHEVNPRKVFELMGSI---------VTQIACGRQHTLAFVPSSG 314
Query: 248 EVYTWGLGSVGQLG 261
+Y++GLG GQLG
Sbjct: 315 RIYSFGLGGNGQLG 328
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 99/217 (45%), Gaps = 26/217 (11%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S I+ WG N GQ G L I K+ P +G + IA G H+ A+
Sbjct: 156 SDIFSWGQNQYGQLGLG-----LEIKKECAPRHIKSLSGIP--FAHIAAGGGHSFALTIS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGY 193
T +GQ N N PR + +I+ Q++CG H +A + G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTNHEVN-PRKVFELM--GSIVTQIACGRQHTLAFVPSSGRIYSFGL 321
Query: 194 NEYGQLGRGITCEGLQGPRVIKG----YAKFLDEAPE 226
GQLG G T + P +KG Y ++ PE
Sbjct: 322 GGNGQLGTGSTINR-KSPFTVKGNWLTYEDYVRHLPE 357
>gi|291404283|ref|XP_002718505.1| PREDICTED: hect domain and RLD 4 isoform 2 [Oryctolagus cuniculus]
Length = 1049
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 186/403 (46%), Gaps = 52/403 (12%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLLGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
I C+ P++IK QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 IDCKKQTSPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYPS----PVDWCVGE---VRKLAAGGGHS 408
+N KS + W P P D E V+++ +GG S
Sbjct: 332 TSNRKSPFTVKGNWLPYNGQCPPDIDSEEYFCVKRIFSGGDQS 374
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGIDCKKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 125/256 (48%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG G + + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GIDCKKQTSPQLIKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|156365518|ref|XP_001626692.1| predicted protein [Nematostella vectensis]
gi|156213578|gb|EDO34592.1| predicted protein [Nematostella vectensis]
Length = 1056
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 114/342 (33%), Positives = 170/342 (49%), Gaps = 41/342 (11%)
Query: 83 LFTWGANEFGQLGDGT--EEGRKHPEKVKQLQ-SEFVKSISCGAHCTAAIAEPRENDGTI 139
+F WG GQLG G +E P ++ L+ S V+ +SCG + TA + + DGT+
Sbjct: 1 MFCWGKCSEGQLGVGETEQEFISTPRLLENLEFSSNVREVSCGWNHTAFLCK----DGTV 56
Query: 140 ST---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
T + GQ + P T I +V+CG H VA+S+ GL+ AWG N Y
Sbjct: 57 YTCGSNEFGQLGQEKSHTNPESVHAIET--FTITKVTCGKAHTVAVSDQGLVFAWGDNSY 114
Query: 197 GQLGRGITC-EGLQG-PRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
GQ+G G E +Q P+++KG AK + Q++CG HS A++ +G ++ WG
Sbjct: 115 GQIGLGSKVKEKVQTIPKMLKGLAKM--------SVVQIACGCNHSMALTISGHLFCWGD 166
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
S GQLG S E P V++L+G+ ++ GG HS AL+S GAL+ WG ++ GQ
Sbjct: 167 NSSGQLGIGKTHSSMSE--PAPVLSLNGVPFMLISAGGAHSFALSSSGALFGWGKNEYGQ 224
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDGRIHGWGY 371
LG+ DT R +P L+ GV V+CG HT V DG + +G
Sbjct: 225 LGV-------------HDTTDRPLPTLLKSLRSQGVCYVSCGEKHTAVLTSDGGVFTFGC 271
Query: 372 NSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
+ GQ + + + + P V +G V ++A G H+ L
Sbjct: 272 GTSGQLGHNSNHHEYTPRKVFELMGSVVTQIACGRAHTLALV 313
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 141/314 (44%), Gaps = 52/314 (16%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y G N GQ G++ PE A + CG HT AV+ G
Sbjct: 55 TVYTCGSNEFGQLGQEKSHTN--------PE--SVHAIETFTITKVTCGKAHTVAVSDQG 104
Query: 82 TLFTWGANEFGQLGDGT---EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
+F WG N +GQ+G G+ E+ + P+ +K L V I+CG + + A+ T
Sbjct: 105 LVFAWGDNSYGQIGLGSKVKEKVQTIPKMLKGLAKMSVVQIACGCNHSMAL--------T 156
Query: 139 ISTSRLWVWGQNQGSNF-------------PRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
IS L+ WG N P L P +I S G H ALS
Sbjct: 157 IS-GHLFCWGDNSSGQLGIGKTHSSMSEPAPVLSLNG-VPFMLI---SAGGAHSFALSSS 211
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G L WG NEYGQLG T + P ++K + + VSCGE H+A ++
Sbjct: 212 GALFGWGKNEYGQLGVHDTTDR-PLPTLLKSLRS--------QGVCYVSCGEKHTAVLTS 262
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGAL 304
+G V+T+G G+ GQLGH S E PR+V L G + +ACG H+ AL S G +
Sbjct: 263 DGGVFTFGCGTSGQLGH---NSNHHEYTPRKVFELMGSVVTQIACGRAHTLALVPSSGRV 319
Query: 305 YAWGGSQAGQLGLG 318
Y +G GQLGLG
Sbjct: 320 YTFGRGGDGQLGLG 333
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 91/200 (45%), Gaps = 20/200 (10%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N SGQ G + P + L G P ++ I+ G H+ A++S G
Sbjct: 161 LFCWGDNSSGQLGIGKTHSSMSEPAPVL-SLNGVP------FMLISAGGAHSFALSSSGA 213
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LF WG NE+GQLG R P +K L+S+ V +SCG TA + +DG + T
Sbjct: 214 LFGWGKNEYGQLGVHDTTDRPLPTLLKSLRSQGVCYVSCGEKHTAVLT----SDGGVFTF 269
Query: 143 RLWVWGQ-----NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGYNEY 196
GQ N PR + +++ Q++CG H +AL G + +G
Sbjct: 270 GCGTSGQLGHNSNHHEYTPRKVFELM--GSVVTQIACGRAHTLALVPSSGRVYTFGRGGD 327
Query: 197 GQLGRGITCEGLQGPRVIKG 216
GQLG G+T P KG
Sbjct: 328 GQLGLGVT-NNCNSPMTAKG 346
>gi|403273883|ref|XP_003928727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Saimiri boliviensis boliviensis]
Length = 1049
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 175/376 (46%), Gaps = 45/376 (11%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLLGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
C+ P++IK QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 TDCKKQTSPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYP 388
+N KS + WYP
Sbjct: 332 TSNRKSPFTVKGNWYP 347
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGTDCKKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG GT+ + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GTDCKKQTSPQLIKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A + G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|403273885|ref|XP_003928728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Saimiri boliviensis boliviensis]
Length = 1057
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 175/376 (46%), Gaps = 45/376 (11%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLLGSEECIRVPRNIKSL--SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
C+ P++IK QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 TDCKKQTSPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYP 388
+N KS + WYP
Sbjct: 332 TSNRKSPFTVKGNWYP 347
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGTDCKKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG GT+ + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GTDCKKQTSPQLIKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A + G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|355562563|gb|EHH19157.1| hypothetical protein EGK_19807 [Macaca mulatta]
Length = 1054
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 175/376 (46%), Gaps = 45/376 (11%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLLGSEECIRVPRNIKSL--SDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
C+ P++IK QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 TDCKKQTSPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYP 388
+N KS + WYP
Sbjct: 332 TSNRKSPFTVKGNWYP 347
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDI--------QIIQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGTDCKKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNI-------KSLSDIQIIQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG GT+ + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GTDCKKQTSPQLIKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A + G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|296220557|ref|XP_002756356.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Callithrix jacchus]
Length = 1057
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 175/376 (46%), Gaps = 45/376 (11%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKKVQDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLLGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
C+ P++IK QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 TDCKKQTSPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYP 388
+N KS + WYP
Sbjct: 332 TSNRKSPFTVKGNWYP 347
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGTDCKKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG GT+ + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GTDCKKQTSPQLIKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|402880677|ref|XP_003903924.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Papio anubis]
Length = 1057
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 175/376 (46%), Gaps = 45/376 (11%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLLGSEECIRVPRNIKSL--SDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
C+ P++IK QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 TDCKKQTSPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYP 388
+N KS + WYP
Sbjct: 332 TSNRKSPFTVKGNWYP 347
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDI--------QIIQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGTDCKKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNI-------KSLSDIQIIQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG GT+ + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GTDCKKQTSPQLIKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|383872260|ref|NP_001244507.1| probable E3 ubiquitin-protein ligase HERC4 [Macaca mulatta]
gi|355782894|gb|EHH64815.1| hypothetical protein EGM_18130 [Macaca fascicularis]
gi|380786489|gb|AFE65120.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
mulatta]
gi|383411599|gb|AFH29013.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
mulatta]
Length = 1057
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 175/376 (46%), Gaps = 45/376 (11%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLLGSEECIRVPRNIKSL--SDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
C+ P++IK QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 TDCKKQTSPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYP 388
+N KS + WYP
Sbjct: 332 TSNRKSPFTVKGNWYP 347
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDI--------QIIQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGTDCKKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNI-------KSLSDIQIIQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG GT+ + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GTDCKKQTSPQLIKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|395820632|ref|XP_003783667.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Otolemur
garnettii]
Length = 1049
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 176/376 (46%), Gaps = 45/376 (11%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLLGSEECIRVPRNIKSL--SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
+ C+ P++IK QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 LDCKKQTSPQLIKSLVGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYP 388
+N KS + W+P
Sbjct: 332 TSNRKSPFTVKGNWFP 347
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGLDCKKQTS-----PQLIKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 124/256 (48%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG G + + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGLDCKKQTSPQLIKSLVGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH-SAAVSE 245
+ +G YGQLG T + +V + +TQ++CG H SA V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GLDCKKQTSPQLIKSLVGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|397520493|ref|XP_003830351.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Pan paniscus]
gi|410221282|gb|JAA07860.1| hect domain and RLD 4 [Pan troglodytes]
gi|410259926|gb|JAA17929.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1057
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 175/376 (46%), Gaps = 45/376 (11%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N R D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKRVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLVGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
C+ P+++K QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 TDCKKQTSPQLLKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYP 388
+N KS + WYP
Sbjct: 332 TSNRKSPFTVKGNWYP 347
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGTDCKKQTS-----PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLVGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG GT+ + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GTDCKKQTSPQLLKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|114630750|ref|XP_001167753.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 8
[Pan troglodytes]
gi|410295452|gb|JAA26326.1| hect domain and RLD 4 [Pan troglodytes]
gi|410333085|gb|JAA35489.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1057
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 175/376 (46%), Gaps = 45/376 (11%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N R D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKRVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLVGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
C+ P+++K QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 TDCKKQTSPQLLKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYP 388
+N KS + WYP
Sbjct: 332 TSNRKSPFTVKGNWYP 347
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGTDCKKQTS-----PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLVGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG GT+ + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GTDCKKQTSPQLLKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|402880679|ref|XP_003903925.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Papio anubis]
Length = 979
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 175/376 (46%), Gaps = 45/376 (11%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLLGSEECIRVPRNIKS--LSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
C+ P++IK QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 TDCKKQTSPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYP 388
+N KS + WYP
Sbjct: 332 TSNRKSPFTVKGNWYP 347
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDI--------QIIQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGTDCKKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNI-------KSLSDIQIIQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG GT+ + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GTDCKKQTSPQLIKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|402880675|ref|XP_003903923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Papio anubis]
Length = 1049
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 175/376 (46%), Gaps = 45/376 (11%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLLGSEECIRVPRNIKSL--SDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
C+ P++IK QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 TDCKKQTSPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYP 388
+N KS + WYP
Sbjct: 332 TSNRKSPFTVKGNWYP 347
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDI--------QIIQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGTDCKKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNI-------KSLSDIQIIQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG GT+ + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GTDCKKQTSPQLIKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|390472682|ref|XP_003734522.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Callithrix
jacchus]
Length = 1049
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 175/376 (46%), Gaps = 45/376 (11%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKKVQDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLLGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
C+ P++IK QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 TDCKKQTSPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYP 388
+N KS + WYP
Sbjct: 332 TSNRKSPFTVKGNWYP 347
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGTDCKKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG GT+ + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GTDCKKQTSPQLIKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|383411601|gb|AFH29014.1| putative E3 ubiquitin-protein ligase HERC4 isoform b [Macaca
mulatta]
Length = 1049
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 175/376 (46%), Gaps = 45/376 (11%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLLGSEECIRVPRNIKSL--SDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
C+ P++IK QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 TDCKKQTSPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYP 388
+N KS + WYP
Sbjct: 332 TSNRKSPFTVKGNWYP 347
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDI--------QIIQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGTDCKKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNI-------KSLSDIQIIQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG GT+ + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GTDCKKQTSPQLIKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|403273887|ref|XP_003928729.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Saimiri boliviensis boliviensis]
Length = 979
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 175/376 (46%), Gaps = 45/376 (11%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLLGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
C+ P++IK QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 TDCKKQTSPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYP 388
+N KS + WYP
Sbjct: 332 TSNRKSPFTVKGNWYP 347
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGTDCKKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG GT+ + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GTDCKKQTSPQLIKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A + G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|296220559|ref|XP_002756357.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Callithrix jacchus]
Length = 979
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 175/376 (46%), Gaps = 45/376 (11%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKKVQDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLLGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
C+ P++IK QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 TDCKKQTSPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYP 388
+N KS + WYP
Sbjct: 332 TSNRKSPFTVKGNWYP 347
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGTDCKKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG GT+ + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GTDCKKQTSPQLIKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A + G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|195336543|ref|XP_002034895.1| GM14399 [Drosophila sechellia]
gi|194127988|gb|EDW50031.1| GM14399 [Drosophila sechellia]
Length = 1058
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/393 (28%), Positives = 174/393 (44%), Gaps = 84/393 (21%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG GQ G G E Q+ P+Q+P P A + +ACGH HT + + G
Sbjct: 7 LYCWGSTSHGQLGLGGIEDEQILTPRQIP----WTPDTAVQQ---VACGHRHTLFLTATG 59
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
++ G+N++ QLG R P+ + +LQ
Sbjct: 60 KVYACGSNDYSQLGHDLPTKR--PQLIPELQ----------------------------- 88
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGR 201
+ +I Q+SCGS H +ALS+ G + +WG N+ GQLG
Sbjct: 89 ------------------------DYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQLGH 124
Query: 202 GITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG 261
E +Q P+V++ + + Q++CG HS A++ GE+Y+WG GQLG
Sbjct: 125 ATEKEIVQLPKVVRQLVS--------KTVVQIACGNNHSLALTSCGELYSWGSNIYGQLG 176
Query: 262 HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQT 321
S P R+ L GI + +ACGG HS ++ GA++ WG + GQLGL +T
Sbjct: 177 VNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDET 236
Query: 322 -RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANE 380
R++ P + T R + GV+ VACG ++ +G + G +YGQ +
Sbjct: 237 NRAY---PTQLKT-LRTL-------GVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHG 285
Query: 381 KSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
S+ P V +G + ++A G H+ L
Sbjct: 286 FSSNEMLPRMVMELMGSTITQVACGNRHTLALV 318
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 143/313 (45%), Gaps = 44/313 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y G N Q G ++ QL PEL + + I+CG H+ A
Sbjct: 55 LTATGKVYACGSNDYSQLGHDLPTKR----PQLIPEL------QDYVIIQISCGSRHSLA 104
Query: 77 VASDGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
++ G + +WG N+ GQLG TE E + P+ V+QL S+ V I+CG + + A+
Sbjct: 105 LSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALT----- 159
Query: 136 DGTISTSRLWVWGQN----QGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSE 184
S L+ WG N G N P P + + ++CG H +S+
Sbjct: 160 ----SCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISK 215
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G + WG N GQLG + Y L L + V+CG+ S ++
Sbjct: 216 SGAVFGWGRNNCGQLGL--------NDETNRAYPTQLKTLRTL-GVRFVACGDEFSVFLT 266
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGA 303
G V+T G G+ GQLGH E+LPR V+ L G I VACG H+ AL S+G
Sbjct: 267 NEGGVFTCGAGAYGQLGH---GFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGK 323
Query: 304 LYAWGGSQAGQLG 316
+YA+G +GQLG
Sbjct: 324 VYAFGLGSSGQLG 336
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 123/269 (45%), Gaps = 42/269 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+ WG N GQ G + +++PK + + + + IACG+ H+ A+ S G
Sbjct: 111 VLSWGDNDCGQLGHATEKEIVQLPKVVRQLV-------SKTVVQIACGNNHSLALTSCGE 163
Query: 83 LFTWGANEFGQLGDGTEEGRKH---PEKVKQLQSEFVKSISCGAHCTAAIAEP------- 132
L++WG+N +GQLG + H P ++ L + +I+CG + + I++
Sbjct: 164 LYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWG 223
Query: 133 RENDGTISTSRLWVWGQNQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
R N G + G N +N +P T V+CG V L+ G +
Sbjct: 224 RNNCGQL--------GLNDETNRAYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGGVFT 273
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS-AAVSENGEV 249
G YGQLG G + + PR++ ITQV+CG H+ A V G+V
Sbjct: 274 CGAGAYGQLGHGFSSNEML-PRMVMELMG--------STITQVACGNRHTLALVPSRGKV 324
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
Y +GLGS GQLG S +S +LP+ V+
Sbjct: 325 YAFGLGSSGQLGTRSTKS---LMLPQVVI 350
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 92/202 (45%), Gaps = 22/202 (10%)
Query: 23 IYVWGYNHSGQTGRKGRE--RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
+Y WG N GQ G P +L L G P A IACG H+ ++
Sbjct: 164 LYSWGSNIYGQLGVNSPNDLTHCNYPLRLT-TLLGIPLAA------IACGGNHSFLISKS 216
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N GQLG E R +P ++K L++ V+ ++CG + + N+G +
Sbjct: 217 GAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLT----NEGGVF 272
Query: 141 TSRLWVWGQ-----NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC-GLLQAWGYN 194
T +GQ + PR+ + I QV+CG+ H +AL G + A+G
Sbjct: 273 TCGAGAYGQLGHGFSSNEMLPRMVMELM--GSTITQVACGNRHTLALVPSRGKVYAFGLG 330
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG T + L P+V+ G
Sbjct: 331 SSGQLGTRST-KSLMLPQVVIG 351
>gi|397520491|ref|XP_003830350.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Pan paniscus]
gi|410221280|gb|JAA07859.1| hect domain and RLD 4 [Pan troglodytes]
gi|410259924|gb|JAA17928.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1049
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 175/376 (46%), Gaps = 45/376 (11%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N R D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKRVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLVGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
C+ P+++K QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 TDCKKQTSPQLLKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYP 388
+N KS + WYP
Sbjct: 332 TSNRKSPFTVKGNWYP 347
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGTDCKKQTS-----PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 125/256 (48%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLVGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG GT+ + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH-SAAVSE 245
+ +G YGQLG T + +V + +TQ++CG H SA V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GTDCKKQTSPQLLKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|63025188|ref|NP_071362.1| probable E3 ubiquitin-protein ligase HERC4 isoform a [Homo sapiens]
gi|74707832|sp|Q5GLZ8.1|HERC4_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
gi|37900475|gb|AAO65480.1| HECT and RCC1 containing protein 4 isoform 1 [Homo sapiens]
gi|119574649|gb|EAW54264.1| hect domain and RLD 4, isoform CRA_d [Homo sapiens]
Length = 1057
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 175/376 (46%), Gaps = 45/376 (11%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N R D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKRVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLVGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
C+ P+++K QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 TDCKKQTSPQLLKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYP 388
+N KS + WYP
Sbjct: 332 TSNRKSPFTVKGNWYP 347
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGTDCKKQTS-----PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFV 310
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 126/256 (49%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLVGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG GT+ + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +T+++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTEIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GTDCKKQTSPQLLKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGYN 194
T +GQ N S+ PR + +I+ +++CG H A G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTEIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|114630758|ref|XP_001167783.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
[Pan troglodytes]
gi|410295450|gb|JAA26325.1| hect domain and RLD 4 [Pan troglodytes]
gi|410333083|gb|JAA35488.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1049
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 175/376 (46%), Gaps = 45/376 (11%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N R D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKRVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLVGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
C+ P+++K QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 TDCKKQTSPQLLKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYP 388
+N KS + WYP
Sbjct: 332 TSNRKSPFTVKGNWYP 347
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGTDCKKQTS-----PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLVGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG GT+ + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GTDCKKQTSPQLLKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|37620181|ref|NP_056416.2| probable E3 ubiquitin-protein ligase HERC4 isoform b [Homo sapiens]
gi|24659293|gb|AAH39600.1| Hect domain and RLD 4 [Homo sapiens]
gi|119574646|gb|EAW54261.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
gi|119574648|gb|EAW54263.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
gi|325463745|gb|ADZ15643.1| hect domain and RLD 4 [synthetic construct]
Length = 1049
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 175/376 (46%), Gaps = 45/376 (11%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N R D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKRVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLVGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
C+ P+++K QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 TDCKKQTSPQLLKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYP 388
+N KS + WYP
Sbjct: 332 TSNRKSPFTVKGNWYP 347
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGTDCKKQTS-----PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFV 310
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 125/256 (48%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLVGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG GT+ + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH-SAAVSE 245
+ +G YGQLG T + +V + +T+++CG H SA V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTEIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GTDCKKQTSPQLLKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGYN 194
T +GQ N S+ PR + +I+ +++CG H A G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTEIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|397520495|ref|XP_003830352.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Pan paniscus]
Length = 979
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 175/376 (46%), Gaps = 45/376 (11%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N R D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKRVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLVGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
C+ P+++K QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 TDCKKQTSPQLLKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYP 388
+N KS + WYP
Sbjct: 332 TSNRKSPFTVKGNWYP 347
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGTDCKKQTS-----PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLVGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG GT+ + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GTDCKKQTSPQLLKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A + G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|326507328|dbj|BAJ95741.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 343
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 159/321 (49%), Gaps = 44/321 (13%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++ G H+ A+ + L TWG E GQLG G E R P + + + S+ CGA T
Sbjct: 19 VSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICGADHT 78
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCG 175
A +E W WG +F RL G FTP + I Q++CG
Sbjct: 79 TAYSEDEHQ------VYSWGWG-----DFGRLGHGNSTDVFTPQPVKALQGIKIKQLACG 127
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
H +A++ G + +WG N+ GQLG G T + L P+ I+ + E + ++
Sbjct: 128 DSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLL-PQTIQAF--------EGISVKMIAA 178
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
G H+AAV+E+G++Y WG G G LG L + +P +V +++G + VACG H+
Sbjct: 179 GAEHTAAVTEDGDIYGWGWGRYGNLG---LGDRNDRFVPEKVSSVEGDKMVLVACGWRHT 235
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS 355
++S G+LY +G S+ GQLG G L+P++ + + + ++ G
Sbjct: 236 ITVSSSGSLYTYGWSKYGQLGHGDFED--HLVPHKVEA--------LKDSSTSQISGGWR 285
Query: 356 HTLVYMRDGRIHGWGYNSYGQ 376
HT+ DG+++GWG+N +GQ
Sbjct: 286 HTMALTSDGKLYGWGWNKFGQ 306
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 155/352 (44%), Gaps = 50/352 (14%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A + + WG GQ G E +L +P + G A + + CG +HT A +
Sbjct: 31 AGNVLCTWGRGEDGQLGHGDAEDRL-----VPTVISGFDAPGITS---VICGADHTTAYS 82
Query: 79 SD-GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPREND 136
D +++WG +FG+LG G P+ VK LQ +K ++CG +HC A
Sbjct: 83 EDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLACGDSHCLAVTM------ 136
Query: 137 GTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
+ WG+NQ + P TI + ++ G+ H A++E G +
Sbjct: 137 ----AGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAAVTEDGDI 192
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG+ YG LG G + +V + E +K+ V+CG H+ VS +G
Sbjct: 193 YGWGWGRYGNLGLGDRNDRFVPEKV---------SSVEGDKMVLVACGWRHTITVSSSGS 243
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
+YT+G GQLGH + L+P +V AL ++ G H+ ALTS G LY WG
Sbjct: 244 LYTYGWSKYGQLGHGDFE---DHLVPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWG 300
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
++ GQ+G G S P + N P V VACG HTL +
Sbjct: 301 WNKFGQVGAGDNADHCS--PAQV-----NFP---EEQKVAQVACGWRHTLAF 342
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 129/294 (43%), Gaps = 55/294 (18%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG+ G GR G + P+ G + +ACG H AV G
Sbjct: 88 VYSWGW---GDFGRLGHGNSTDV---FTPQPVKALQGIKIK--QLACGDSHCLAVTMAGE 139
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ +WG N+ GQLG GT E P+ ++ + VK I+ GA TAA+ E DG I
Sbjct: 140 VLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAAVTE----DGDIYG- 194
Query: 143 RLWVWGQ----NQGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
W WG+ G R F P + + V+CG H + +S G L +
Sbjct: 195 --WGWGRYGNLGLGDRNDR-----FVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTY 247
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G+++YGQLG G + L +V EA + +Q+S G H+ A++ +G++Y
Sbjct: 248 GWSKYGQLGHGDFEDHLVPHKV---------EALKDSSTSQISGGWRHTMALTSDGKLYG 298
Query: 252 WGLGSVGQLG------HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT 299
WG GQ+G HCS P +V + + VACG H+ A T
Sbjct: 299 WGWNKFGQVGAGDNADHCS---------PAQVNFPEEQKVAQVACGWRHTLAFT 343
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 89/196 (45%), Gaps = 21/196 (10%)
Query: 222 DEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVA 279
DEAP + VS G HS A+ + TWG G GQLGH GD E L+P +
Sbjct: 10 DEAPP--AVVLVSAGASHSVALLAGNVLCTWGRGEDGQLGH-----GDAEDRLVPTVISG 62
Query: 280 LDGIFIKDVACGGVHSCALT-SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
D I V CG H+ A + + +Y+WG G+LG G T F+ P ++ + I
Sbjct: 63 FDAPGITSVICGADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKA---LQGI 119
Query: 339 PILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-E 397
I + +ACG SH L G + WG N GQ + + P + G
Sbjct: 120 KI-------KQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGIS 172
Query: 398 VRKLAAGGGHSAVLAD 413
V+ +AAG H+A + +
Sbjct: 173 VKMIAAGAEHTAAVTE 188
>gi|158259079|dbj|BAF85498.1| unnamed protein product [Homo sapiens]
Length = 1027
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 175/376 (46%), Gaps = 45/376 (11%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N R D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKRVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLVGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
C+ P+++K QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 TDCKKQTSPQLLKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTEIACGRQHTSTFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYP 388
+N KS + WYP
Sbjct: 332 TSNRKSPFTVKGNWYP 347
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGTDCKKQTS-----PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSTFV 310
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 125/256 (48%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLVGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG GT+ + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +T+++CG H++ V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTEIACGRQHTSTFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GTDCKKQTSPQLLKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHV-VALSECGLLQAWGYN 194
T +GQ N S+ PR + +I+ +++CG H + G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTEIACGRQHTSTFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|114630760|ref|XP_001167652.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 4
[Pan troglodytes]
Length = 979
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 175/376 (46%), Gaps = 45/376 (11%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N R D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKRVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLVGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
C+ P+++K QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 TDCKKQTSPQLLKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYP 388
+N KS + WYP
Sbjct: 332 TSNRKSPFTVKGNWYP 347
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGTDCKKQTS-----PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLVGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG GT+ + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GTDCKKQTSPQLLKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|332218227|ref|XP_003258260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Nomascus leucogenys]
Length = 1057
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 175/376 (46%), Gaps = 45/376 (11%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLLGSEECIRVPRNIKSL--SDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
C+ P+++K QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 TDCKKQTSPQLLKSLVGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYP 388
+N KS + WYP
Sbjct: 332 TSNRKSPFTVKGNWYP 347
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGTDCKKQTS-----PQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG GT+ + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GTDCKKQTSPQLLKSLVGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|149043901|gb|EDL97352.1| rCG61079, isoform CRA_a [Rattus norvegicus]
Length = 546
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/372 (30%), Positives = 174/372 (46%), Gaps = 41/372 (11%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+ WG GQ G G + ++ + P++ + F N + D+ CG HT V DG
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRK--SDFF-----VNKKVRDVGCGLRHTVFVLDDG 53
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTI 139
T++T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G
Sbjct: 54 TVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 140 STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
S +L + G + PR + I QV+CG H +ALS+ + WG N+YGQL
Sbjct: 112 SDGQLGLQGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQL 169
Query: 200 GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ 259
G GI C+ P++IK QV+ G HS ++ +G ++ WG GQ
Sbjct: 170 GLGIECQKQTSPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LG L + +P + +L I + CG H+ ALT +G ++ +G GQ LG
Sbjct: 222 LG---LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGH 276
Query: 320 QTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ-- 376
+ S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 277 NSTSHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Query: 377 ---AANEKSTYA 385
+N KS +
Sbjct: 329 TGSTSNRKSPFT 340
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG +GQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGIECQKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G +G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLQGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG G E + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G E Q + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GIECQKQTSPQLIKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A + G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGST-SNRKSPFTVKG 343
>gi|332218225|ref|XP_003258259.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Nomascus leucogenys]
Length = 1049
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 175/376 (46%), Gaps = 45/376 (11%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLLGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
C+ P+++K QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 TDCKKQTSPQLLKSLVGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYP 388
+N KS + WYP
Sbjct: 332 TSNRKSPFTVKGNWYP 347
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGTDCKKQTS-----PQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 125/256 (48%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG GT+ + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH-SAAVSE 245
+ +G YGQLG T + +V + +TQ++CG H SA V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GTDCKKQTSPQLLKSLVGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|168052711|ref|XP_001778783.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669789|gb|EDQ56369.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/331 (32%), Positives = 159/331 (48%), Gaps = 48/331 (14%)
Query: 59 GANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKS 118
G + L ++ G H+ A+ S + +WG E GQLG G E R P V L + S
Sbjct: 11 GVRRQVLALSAGASHSVALLSGDLVCSWGRGEDGQLGHGDAEERHFPTIVSALDDCEISS 70
Query: 119 ISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI------ 168
++CGA T A++ + T W WG +F RL G F P I
Sbjct: 71 VTCGADHTTALSN------STKTVYSWGWG-----DFGRLGHGNSSDLFIPQPIKALKGL 119
Query: 169 -ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL 227
+ Q++CG H +A++ G + WG N+ GQLG G T E + P + + E
Sbjct: 120 EVKQIACGDSHCLAITTDGEVLGWGRNQNGQLGLGHT-EDVLTPHKLTAF--------EG 170
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFI 285
+ ++ G H+ AV+ENG++Y WG G G LG GD+E L+P +V A+ G +
Sbjct: 171 VAVKMLAAGAEHTTAVTENGKLYGWGWGRYGNLG-----LGDREDRLVPDQVAAVAGELM 225
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
K VACG H+ + G +Y +G S+ GQLG G + LIP++ +
Sbjct: 226 KMVACGWRHTICVAESGNMYTFGWSKYGQLGHGD--FADHLIPHQVQA--------LKSK 275
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+Q + G HT DGR++GWG+N +GQ
Sbjct: 276 KIQAITGGWRHTFALDSDGRLYGWGWNKFGQ 306
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 110/361 (30%), Positives = 161/361 (44%), Gaps = 50/361 (13%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA-SDGTLF 84
WG GQ G G + P + L C + + CG +HT A++ S T++
Sbjct: 38 WGRGEDGQLGH-GDAEERHFPT-IVSALDDCEISS------VTCGADHTTALSNSTKTVY 89
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGTISTSR 143
+WG +FG+LG G P+ +K L+ VK I+CG +HC A DG +
Sbjct: 90 SWGWGDFGRLGHGNSSDLFIPQPIKALKGLEVKQIACGDSHCLAIT-----TDGEVLG-- 142
Query: 144 LWVWGQNQGSNFPRLFW-GAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYNE 195
WG+NQ TP+ + + ++ G+ H A++E G L WG+
Sbjct: 143 ---WGRNQNGQLGLGHTEDVLTPHKLTAFEGVAVKMLAAGAEHTTAVTENGKLYGWGWGR 199
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
YG LG G + L +V A EL K+ V+CG H+ V+E+G +YT+G
Sbjct: 200 YGNLGLGDREDRLVPDQVAA-------VAGELMKM--VACGWRHTICVAESGNMYTFGWS 250
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
GQLGH L+P +V AL I+ + G H+ AL S G LY WG ++ GQ+
Sbjct: 251 KYGQLGHGDFAD---HLIPHQVQALKSKKIQAITGGWRHTFALDSDGRLYGWGWNKFGQV 307
Query: 316 GLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
G G N D + + V +V CG HTL G ++ WG + G
Sbjct: 308 GCG----------NTEDQSSPQLVKGLQDQVVTVVQCGWRHTLAMTDRGNVYSWGRGTSG 357
Query: 376 Q 376
Q
Sbjct: 358 Q 358
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 143/306 (46%), Gaps = 33/306 (10%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
+ +Y WG+ G+ G G L IP+ + L G IACG H A+
Sbjct: 84 STKTVYSWGWGDFGRLGH-GNSSDLFIPQPIKA-LKGLEVK------QIACGDSHCLAIT 135
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
+DG + WG N+ GQLG G E P K+ + VK ++ GA T A+ E + G
Sbjct: 136 TDGEVLGWGRNQNGQLGLGHTEDVLTPHKLTAFEGVAVKMLAAGAEHTTAVTENGKLYG- 194
Query: 139 ISTSRLWVWGQ----NQGSNFPRLFWG--AFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
W WG+ G RL A ++ V+CG H + ++E G + +G
Sbjct: 195 ------WGWGRYGNLGLGDREDRLVPDQVAAVAGELMKMVACGWRHTICVAESGNMYTFG 248
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
+++YGQLG G + L +V +A + +KI ++ G H+ A+ +G +Y W
Sbjct: 249 WSKYGQLGHGDFADHLIPHQV---------QALKSKKIQAITGGWRHTFALDSDGRLYGW 299
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G GQ+G C + + + P+ V L + V CG H+ A+T +G +Y+WG +
Sbjct: 300 GWNKFGQVG-CG--NTEDQSSPQLVKGLQDQVVTVVQCGWRHTLAMTDRGNVYSWGRGTS 356
Query: 313 GQLGLG 318
GQLG G
Sbjct: 357 GQLGHG 362
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 147/330 (44%), Gaps = 63/330 (19%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I + WG N +GQ G E L P G + L A G EHT A
Sbjct: 134 ITTDGEVLGWGRNQNGQLGLGHTE------DVLTPHKLTAFEGVAVKML--AAGAEHTTA 185
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V +G L+ WG +G LG G E R P++V + E +K ++CG T +AE
Sbjct: 186 VTENGKLYGWGWGRYGNLGLGDREDRLVPDQVAAVAGELMKMVACGWRHTICVAE----- 240
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSC-----------GSVHVVALSEC 185
+ ++ +G S + +L G F + I QV G H AL
Sbjct: 241 ----SGNMYTFGW---SKYGQLGHGDFADHLIPHQVQALKSKKIQAITGGWRHTFALDSD 293
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G L WG+N++GQ+G G T E P+++KG + + +T V CG H+ A+++
Sbjct: 294 GRLYGWGWNKFGQVGCGNT-EDQSSPQLVKGL--------QDQVVTVVQCGWRHTLAMTD 344
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGD--KELLPRRVVAL--DGIFIKDVACGGVHSCALTSK 301
G VY+WG G+ GQLGH GD P+R+ L DG + + G +C TSK
Sbjct: 345 RGNVYSWGRGTSGQLGH-----GDTVDRSTPKRIEILSSDGFACEQIESSGSSNC--TSK 397
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNES 331
+ + + P R ++++P+E+
Sbjct: 398 TSNW-----------ISPAER-YAVVPDET 415
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 20/135 (14%)
Query: 275 RRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTY 334
R+V+AL + G HS AL S + +WG + GQLG G + + +
Sbjct: 14 RQVLAL--------SAGASHSVALLSGDLVCSWGRGEDGQLGHG----------DAEERH 55
Query: 335 FRNIPILVVPNGVQLVACGHSHTLVYMRDGR-IHGWGYNSYGQAANEKSTYAWYPSPVDW 393
F I + + V CG HT + ++ WG+ +G+ + S+ + P P+
Sbjct: 56 FPTIVSALDDCEISSVTCGADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFIPQPIKA 115
Query: 394 CVG-EVRKLAAGGGH 407
G EV+++A G H
Sbjct: 116 LKGLEVKQIACGDSH 130
>gi|301618542|ref|XP_002938670.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Xenopus
(Silurana) tropicalis]
Length = 1029
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/337 (31%), Positives = 161/337 (47%), Gaps = 25/337 (7%)
Query: 83 LFTWGANEFGQLG--DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
++ WG N FGQL G +E E E V+ +SCG T + E DGT+
Sbjct: 1 MYCWGDNCFGQLALLQGEKEVVHFKENDYFQSQECVQKVSCGEKHTLYLLE----DGTLL 56
Query: 141 TSRLWVWGQ-NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
+ +GQ + SN + + I +SCG+ H VA+S+ G + +WG GQL
Sbjct: 57 SCGQNPYGQLGRKSNNSSIEQISSLEAQTIVDISCGTNHSVAVSDEGSIYSWGDGSEGQL 116
Query: 200 GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ 259
G G P+ I G KI Q+SCG +HS A+SE+G V++WG GQ
Sbjct: 117 GTGNLSSRNFTPKKITGLFN--------TKIIQISCGNFHSLALSEDGRVFSWGQNKCGQ 168
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LG S + P+ V +L GI + V GG S AL+ G ++AWG + AGQLG
Sbjct: 169 LGLGS--QIINQATPQLVKSLKGIPLVQVTAGGSQSFALSMSGTVFAWGKNNAGQLGFKS 226
Query: 320 QTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAAN 379
+ P+ ++ RN+ GV ++CG HT V +DG ++ +G +++GQ
Sbjct: 227 DPMKGTFKPHAVNS-LRNL-------GVAYISCGEEHTAVLSKDGSVYTFGDDTHGQLGQ 278
Query: 380 EKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACS 416
P ++ G+V ++A G H+ + +C+
Sbjct: 279 NSGNQTSVPQKIEDYAGQVSQVACGRYHTLLYVFSCN 315
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 162/341 (47%), Gaps = 50/341 (14%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++CG +HT + DGTL + G N +GQL G + E++ L+++ + ISCG + +
Sbjct: 39 VSCGEKHTLYLLEDGTLLSCGQNPYGQL--GRKSNNSSIEQISSLEAQTIVDISCGTNHS 96
Query: 127 AAIAEPRENDGTISTSRLWVWGQN----------QGSNF-PRLFWGAFTPNTIICQVSCG 175
A+++ +G+I + WG NF P+ G F NT I Q+SCG
Sbjct: 97 VAVSD----EGSI-----YSWGDGSEGQLGTGNLSSRNFTPKKITGLF--NTKIIQISCG 145
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
+ H +ALSE G + +WG N+ GQLG G P+++K L P + QV+
Sbjct: 146 NFHSLALSEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKS----LKGIP----LVQVTA 197
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
G S A+S +G V+ WG + GQLG S P V +L + + ++CG H+
Sbjct: 198 GGSQSFALSMSGTVFAWGKNNAGQLGFKS-DPMKGTFKPHAVNSLRNLGVAYISCGEEHT 256
Query: 296 CALTSKGALYAWGGSQAGQLGL--GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG 353
L+ G++Y +G GQLG G QT +P + + Y V VACG
Sbjct: 257 AVLSKDGSVYTFGDDTHGQLGQNSGNQTS----VPQKIEDY---------AGQVSQVACG 303
Query: 354 HSHTLVYMRD-GRIHGWGYNSY-GQAANEKSTYAWYPSPVD 392
HTL+Y+ RI +G S Q E S A PS D
Sbjct: 304 RYHTLLYVFSCNRIVSFGKGSLRPQDNTECSDEAELPSEFD 344
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 130/284 (45%), Gaps = 50/284 (17%)
Query: 27 GYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTW 86
G N GQ GRK + L + +DI+CG H+ AV+ +G++++W
Sbjct: 59 GQNPYGQLGRKSNNSSIEQISSLEAQTI----------VDISCGTNHSVAVSDEGSIYSW 108
Query: 87 GANEFGQLGDGTEEGRKH-PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLW 145
G GQLG G R P+K+ L + + ISCG + A++E DG R++
Sbjct: 109 GDGSEGQLGTGNLSSRNFTPKKITGLFNTKIIQISCGNFHSLALSE----DG-----RVF 159
Query: 146 VWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWG 192
WGQN+ GS TP + + QV+ G ALS G + AWG
Sbjct: 160 SWGQNKCGQLGLGSQ----IINQATPQLVKSLKGIPLVQVTAGGSQSFALSMSGTVFAWG 215
Query: 193 YNEYGQLG-RGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
N GQLG + +G P + + +SCGE H+A +S++G VYT
Sbjct: 216 KNNAGQLGFKSDPMKGTFKPHAVNSLRNL--------GVAYISCGEEHTAVLSKDGSVYT 267
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
+G + GQLG SG++ +P+++ G + VACG H+
Sbjct: 268 FGDDTHGQLGQ---NSGNQTSVPQKIEDYAGQ-VSQVACGRYHT 307
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 120/259 (46%), Gaps = 44/259 (16%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+IY WG GQ G + PK++ LF N++ + I+CG+ H+ A++ DG
Sbjct: 104 SIYSWGDGSEGQLGTGNLSSRNFTPKKIT-GLF------NTKIIQISCGNFHSLALSEDG 156
Query: 82 TLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+F+WG N+ GQLG G++ + P+ VK L+ + ++ G + A++ GT+
Sbjct: 157 RVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQSFALSM----SGTV- 211
Query: 141 TSRLWVWGQNQGSNF---PRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQA 190
+ WG+N G F P+ + + +SCG H LS+ G +
Sbjct: 212 ----FAWGKNNAGQLGFKSDPMKGTFKPHAVNSLRNLGVAYISCGEEHTAVLSKDGSVYT 267
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
+G + +GQLG+ + P+ I+ YA +++QV+CG YH+ +Y
Sbjct: 268 FGDDTHGQLGQN-SGNQTSVPQKIEDYAG---------QVSQVACGRYHTL-------LY 310
Query: 251 TWGLGSVGQLGHCSLQSGD 269
+ + G SL+ D
Sbjct: 311 VFSCNRIVSFGKGSLRPQD 329
>gi|449680679|ref|XP_002161042.2| PREDICTED: uncharacterized protein LOC100209924 [Hydra
magnipapillata]
Length = 809
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/409 (29%), Positives = 187/409 (45%), Gaps = 56/409 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
IY WG + G G G E + +L P + G + R +ACG EHT AV+ +G
Sbjct: 375 IYTWGASPKGVLGH-GEETE-----ELFPRVVEALLGRDIR--TVACGTEHTLAVSVNGE 426
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F+WG G+LG R P K+ ++ + +SC +A++ E E
Sbjct: 427 MFSWGCGRGGKLGLKNILDRYMPLKIGAFENVNITFVSCNELHSASVTESGE-------- 478
Query: 143 RLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
L+ +G +++ PR F+ I VSCG +AL+ G L ++G
Sbjct: 479 -LYTFGRSGPHLGYTTEDRKQAVPRKV--DFSTANKIKAVSCGLEFTIALNSEGELYSFG 535
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
N+ GQLG G ++ P +IK +I++VSCG H AV+ NG+V+ W
Sbjct: 536 KNDCGQLGAG-HFNDIEEPYLIKHLNGV--------RISKVSCGSKHVGAVTVNGDVWLW 586
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G GQLG L++ D + I+D+ CGG H+ L+ G +Y +G Q+
Sbjct: 587 GSNEFGQLGTDKLEAHDIPFEAPSTFWNEE--IQDIKCGGSHTVVLSCTGVVYVFGNGQS 644
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGRIHGWG 370
GQLG+ N++ Y N IL +PN ++ V CG HT G ++ WG
Sbjct: 645 GQLGVA---------VNQTSPYITNPCILSMPNNTKIAKVDCGIEHTAAVTESGCLYTWG 695
Query: 371 YNSYGQAANEKSTYAWYPSPVD-WCVGEVRKLAAGGGHSAVLADACSLK 418
S G+ + + P+ V+ +V+ +A G H+A AC ++
Sbjct: 696 NGSRGRLGHGDHQDRYVPTLVESLAYKQVQSIACGAYHTA----ACVIR 740
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 72/167 (43%), Gaps = 16/167 (9%)
Query: 241 AAVSENG-EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT 299
+V E+ ++YTWG G LGH +EL PR V AL G I+ VACG H+ A++
Sbjct: 366 VSVKEDACDIYTWGASPKGVLGH---GEETEELFPRVVEALLGRDIRTVACGTEHTLAVS 422
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN-GVQLVACGHSHTL 358
G +++WG + G+LGL N D Y + I N + V+C H+
Sbjct: 423 VNGEMFSWGCGRGGKLGL----------KNILDRYMP-LKIGAFENVNITFVSCNELHSA 471
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGG 405
G ++ +G + + P VD+ K + G
Sbjct: 472 SVTESGELYTFGRSGPHLGYTTEDRKQAVPRKVDFSTANKIKAVSCG 518
>gi|55832181|gb|AAV66579.1| HECT and RCC1 containing protein 4 isoform 3 [Homo sapiens]
Length = 979
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 175/376 (46%), Gaps = 45/376 (11%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N R D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKRVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLVGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
C+ P+++K QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 TDCKKQTSPQLLKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYP 388
+N KS + WYP
Sbjct: 332 TSNRKSPFTVKGNWYP 347
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGTDCKKQTS-----PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFV 310
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 126/256 (49%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLVGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG GT+ + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +T+++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTEIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GTDCKKQTSPQLLKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYN 194
T +GQ N S+ PR + +I+ +++CG H A + G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTEIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|428171592|gb|EKX40507.1| hypothetical protein GUITHDRAFT_96261, partial [Guillardia theta
CCMP2712]
Length = 424
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 158/340 (46%), Gaps = 40/340 (11%)
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAI 129
G+ + ++G ++ +G+N FGQLG G+ P V L+++ + +++ G + +
Sbjct: 85 GNPFSTLTINEGDVYGFGSNNFGQLGTGSLNNTVIPMIVPVLRNQNMSAVAAGEEFSVSS 144
Query: 130 AEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTIICQVSCGSVHVVALSEC 185
+ RLW WG+N G + P ++ V + H +ALS
Sbjct: 145 SL---------KGRLWSWGRNYRGQLGLTDAGINLCTYPPCSVEKSVKLTNHHTLALSRS 195
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G+L AWG N GQLG G T + Q P K L QVS G HS AV+
Sbjct: 196 GILFAWGINHMGQLGTGDTADRFQ-PTPTKNSKDLL--------FFQVSAGGEHSMAVTS 246
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRR------VVALDGIFIKDVACGGVHSCALT 299
G+VY WG GS GQLG SL G + PRR V L FI VA G +HS AL+
Sbjct: 247 LGKVYVWGSGSSGQLGQDSLDIGPNSVEPRRSLEAILVPGLKDQFIVQVAAGWLHSIALS 306
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
G ++ WGG++ GQLGLG + F+ + + + P++ +A GH H+L
Sbjct: 307 KDGEIWIWGGNRHGQLGLGDKLNRFAPVKLQGKEFQMLGPVIS-------IAAGHGHSLF 359
Query: 360 YMRDGRIHGWGYNSYGQA----ANEKSTYAWYPSPVD-WC 394
G + G N GQ + ++S+ ++ P P WC
Sbjct: 360 LNSSGHVFSSGRNDAGQLGVGNSIDRSSISFVPIPNRIWC 399
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 111/256 (43%), Gaps = 33/256 (12%)
Query: 166 NTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAP 225
N + V+ G V+ S G L +WG N GQLG +T G+ L P
Sbjct: 128 NQNMSAVAAGEEFSVSSSLKGRLWSWGRNYRGQLG--LTDAGIN-----------LCTYP 174
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGI 283
V +H+ A+S +G ++ WG+ +GQLG +GD P +
Sbjct: 175 PCSVEKSVKLTNHHTLALSRSGILFAWGINHMGQLG-----TGDTADRFQPTPTKNSKDL 229
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
V+ GG HS A+TS G +Y WG +GQLG S + PN + R++ ++V
Sbjct: 230 LFFQVSAGGEHSMAVTSLGKVYVWGSGSSGQLG----QDSLDIGPNSVEPR-RSLEAILV 284
Query: 344 P----NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVD----WCV 395
P + VA G H++ +DG I WG N +GQ + P + +
Sbjct: 285 PGLKDQFIVQVAAGWLHSIALSKDGEIWIWGGNRHGQLGLGDKLNRFAPVKLQGKEFQML 344
Query: 396 GEVRKLAAGGGHSAVL 411
G V +AAG GHS L
Sbjct: 345 GPVISIAAGHGHSLFL 360
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 137/329 (41%), Gaps = 51/329 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y +G N+ GQ G G IP +P N +A G E + + + G
Sbjct: 98 VYGFGSNNFGQLG-TGSLNNTVIPMIVP-------VLRNQNMSAVAAGEEFSVSSSLKGR 149
Query: 83 LFTWGANEFGQLG---DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
L++WG N GQLG G P V+ KS+ H T A++
Sbjct: 150 LWSWGRNYRGQLGLTDAGINLCTYPPCSVE-------KSVKLTNHHTLALSR-------- 194
Query: 140 STSRLWVWGQNQ------GSNFPRLFWGAFTPNT---IICQVSCGSVHVVALSECGLLQA 190
+ L+ WG N G R F T N+ + QVS G H +A++ G +
Sbjct: 195 -SGILFAWGINHMGQLGTGDTADR-FQPTPTKNSKDLLFFQVSAGGEHSMAVTSLGKVYV 252
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG GQLG+ G + L + + I QV+ G HS A+S++GE++
Sbjct: 253 WGSGSSGQLGQDSLDIGPNSVEPRRSLEAILVPGLKDQFIVQVAAGWLHSIALSKDGEIW 312
Query: 251 TWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIF---IKDVACGGVHSCALTSKGALY 305
WG GQLG GDK P ++ + + +A G HS L S G ++
Sbjct: 313 IWGGNRHGQLGL-----GDKLNRFAPVKLQGKEFQMLGPVISIAAGHGHSLFLNSSGHVF 367
Query: 306 AWGGSQAGQLGLGP----QTRSFSLIPNE 330
+ G + AGQLG+G + SF IPN
Sbjct: 368 SSGRNDAGQLGVGNSIDRSSISFVPIPNR 396
>gi|332218229|ref|XP_003258261.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Nomascus leucogenys]
Length = 979
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 175/376 (46%), Gaps = 45/376 (11%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLLGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
C+ P+++K QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 TDCKKQTSPQLLKSLVGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYP 388
+N KS + WYP
Sbjct: 332 TSNRKSPFTVKGNWYP 347
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGTDCKKQTS-----PQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG GT+ + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GTDCKKQTSPQLLKSLVGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A + G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|219125443|ref|XP_002182991.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405785|gb|EEC45727.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 341
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 149/309 (48%), Gaps = 46/309 (14%)
Query: 23 IYVWGYNHSGQTGR--KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
++ WG G+ G G + R+ + L ++ L + CG HTAAV +
Sbjct: 54 VFTWGRGDDGRLGHGDNGWKYVPRMTQSLAGQIV----------LQVTCGSYHTAAVTGN 103
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G L+TWG +G+LG G E G P++V+ L V I+CG+ TA + +
Sbjct: 104 GDLYTWGGGMYGKLGHGDEAGHATPKRVEALVGATVAQIACGSRHTAIVT---------A 154
Query: 141 TSRLWVW----------GQNQGSNF-PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQ 189
+ L+ W G+ +G + PRL + Q+S H +++ G L
Sbjct: 155 SGALYTWGDKENGVAGHGETEGHQYLPRLLESMAAKR--VAQISACGFHTAIVTDAGELF 212
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
WG ++G+LG ++ P ++ + + P QVSCG +H+A VSE+G +
Sbjct: 213 TWGEGKFGRLGH-MSERNCHSPTIVD---YMVGKKPR-----QVSCGGFHTAVVSEDGRL 263
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
YT+G G GQLGH + ++ P V ALDG+F+ + CG HS ALT KG +Y WG
Sbjct: 264 YTFGGGEHGQLGHNDRVN---KMTPTFVEALDGMFVSQITCGWSHSVALTVKGLVYTWGN 320
Query: 310 SQAGQLGLG 318
G+LG G
Sbjct: 321 GDHGKLGHG 329
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 168/382 (43%), Gaps = 52/382 (13%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A++ WG GQ G Q P G + IACG HT + +DG
Sbjct: 1 AVFTWGRGEDGQLGLG------DTSDQDEPTYVDALRGVGVQ--QIACGSGHTVVLTTDG 52
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+FTWG + G+LG G + P + L + V ++CG++ TAA+
Sbjct: 53 EVFTWGRGDDGRLGHGDNGWKYVPRMTQSLAGQIVLQVTCGSYHTAAVT---------GN 103
Query: 142 SRLWVWGQNQGSNFPRLFW----GAFTPNTI-------ICQVSCGSVHVVALSECGLLQA 190
L+ WG G + +L G TP + + Q++CGS H ++ G L
Sbjct: 104 GDLYTWG---GGMYGKLGHGDEAGHATPKRVEALVGATVAQIACGSRHTAIVTASGALYT 160
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG E G G G T EG Q Y L E+ +++ Q+S +H+A V++ GE++
Sbjct: 161 WGDKENGVAGHGET-EGHQ-------YLPRLLESMAAKRVAQISACGFHTAIVTDAGELF 212
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
TWG G G+LGH S ++ P V + G + V+CGG H+ ++ G LY +GG
Sbjct: 213 TWGEGKFGRLGHMSERNCHS---PTIVDYMVGKKPRQVSCGGFHTAVVSEDGRLYTFGGG 269
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWG 370
+ GQ LG R + P T+ + + V + CG SH++ G ++ WG
Sbjct: 270 EHGQ--LGHNDRVNKMTP----TFVEALDGMFVSQ----ITCGWSHSVALTVKGLVYTWG 319
Query: 371 YNSYGQAANEKSTYAWYPSPVD 392
+G+ + P V+
Sbjct: 320 NGDHGKLGHGNGRKVAVPQAVE 341
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 130/252 (51%), Gaps = 26/252 (10%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ Q++CGS H V L+ G + WG + G+LG G G + Y + ++ +
Sbjct: 35 VQQIACGSGHTVVLTTDGEVFTWGRGDDGRLGHGD--NGWK-------YVPRMTQSLAGQ 85
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIK 286
+ QV+CG YH+AAV+ NG++YTWG G G+LGH GD+ P+RV AL G +
Sbjct: 86 IVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLGH-----GDEAGHATPKRVEALVGATVA 140
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
+ACG H+ +T+ GALY WG + G G G +T +P R + +
Sbjct: 141 QIACGSRHTAIVTASGALYTWGDKENGVAGHG-ETEGHQYLP-------RLLESMAAKRV 192
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEV-RKLAAGG 405
Q+ ACG HT + G + WG +G+ + P+ VD+ VG+ R+++ GG
Sbjct: 193 AQISACGF-HTAIVTDAGELFTWGEGKFGRLGHMSERNCHSPTIVDYMVGKKPRQVSCGG 251
Query: 406 GHSAVLADACSL 417
H+AV+++ L
Sbjct: 252 FHTAVVSEDGRL 263
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 92/203 (45%), Gaps = 30/203 (14%)
Query: 11 ARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDI-AC 69
+R + A A+Y WG +G G E +P+ L A R I AC
Sbjct: 146 SRHTAIVTASGALYTWGDKENGVAGHGETEGHQYLPRLLESM-------AAKRVAQISAC 198
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAI 129
G HTA V G LFTWG +FG+LG +E P V + + + +SCG TA +
Sbjct: 199 GF-HTAIVTDAGELFTWGEGKFGRLGHMSERNCHSPTIVDYMVGKKPRQVSCGGFHTAVV 257
Query: 130 AEPRENDGTISTSRLWVWG---QNQGSNFPRLFWGAFTPNTI-------ICQVSCGSVHV 179
+E DG RL+ +G Q + R+ TP + + Q++CG H
Sbjct: 258 SE----DG-----RLYTFGGGEHGQLGHNDRV--NKMTPTFVEALDGMFVSQITCGWSHS 306
Query: 180 VALSECGLLQAWGYNEYGQLGRG 202
VAL+ GL+ WG ++G+LG G
Sbjct: 307 VALTVKGLVYTWGNGDHGKLGHG 329
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 79/170 (46%), Gaps = 14/170 (8%)
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
V+TWG G GQLG D+ P V AL G+ ++ +ACG H+ LT+ G ++ WG
Sbjct: 2 VFTWGRGEDGQLGLGDTSDQDE---PTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWG 58
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHG 368
G+LG G + +P + + I V V CG HT +G ++
Sbjct: 59 RGDDGRLGHGDN--GWKYVPRMTQSLAGQI--------VLQVTCGSYHTAAVTGNGDLYT 108
Query: 369 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
WG YG+ + P V+ VG V ++A G H+A++ + +L
Sbjct: 109 WGGGMYGKLGHGDEAGHATPKRVEALVGATVAQIACGSRHTAIVTASGAL 158
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
A++ WG + GQLGLG + + TY + + GVQ +ACG HT+V
Sbjct: 1 AVFTWGRGEDGQLGLGDTS------DQDEPTYVDALRGV----GVQQIACGSGHTVVLTT 50
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 411
DG + WG G+ + + + + P G+ V ++ G H+A +
Sbjct: 51 DGEVFTWGRGDDGRLGHGDNGWKYVPRMTQSLAGQIVLQVTCGSYHTAAV 100
>gi|159038540|ref|YP_001537793.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157917375|gb|ABV98802.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 579
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 126/417 (30%), Positives = 162/417 (38%), Gaps = 69/417 (16%)
Query: 24 YVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTL 83
WG N +G+ G G P + PAG + +A G H+ AV S GT
Sbjct: 63 LAWGTNSAGRLG-DGTTTDSSSPVSV-----NVPAG--TTITAVAGGAGHSLAVTSAGTA 114
Query: 84 FTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSR 143
WG N FGQLGDGT + + + G TA N S
Sbjct: 115 LAWGDNAFGQLGDGT--------TIPSSSTPVAVDVPAGTTVTALSGGGVHNLAVTSAGT 166
Query: 144 LWVWGQNQGSNFPRLFWGAF---------TP-------NTIICQVSCGSVHVVALSECGL 187
WG N FWG TP T I V+ G H +A++ G
Sbjct: 167 ALAWGDN--------FWGQLGDGSTTRSRTPVAVNVPAGTTITAVAAGQGHSLAVTSAGT 218
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
AWG N GQLG G + + P IT V+ G HS A++ G
Sbjct: 219 ALAWGDNSSGQLGDGTATD---------SSIPVAADVPAGTTITAVAAGGLHSLALTSGG 269
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
+V WG GQLG + S P V G + VA GG HS A+TS G + AW
Sbjct: 270 DVLAWGANGSGQLGDGTTTSSST---PVAVDVPAGTTVTAVAAGGRHSLAVTSAGDVLAW 326
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQL--VACGHSHTLVYMRDG 364
G + AGQLG G T S + P+ V VP G + VA G H+L
Sbjct: 327 GDNTAGQLGDGSTTHS-------------STPVAVNVPAGTTITAVATGSGHSLAVTSTD 373
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSLKEL 420
WG N++GQ + +T + P VD G V +A G HS + + S L
Sbjct: 374 TALAWGDNTFGQLGDGSTTSSIIPVAVDLPAGTTVTAIAGGSFHSLAIVPSTSTTTL 430
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 147/350 (42%), Gaps = 53/350 (15%)
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
AA GT WG N G+LGDGT P V + +++ GA + A+
Sbjct: 54 AAAGPPGTGLAWGTNSAGRLGDGTTTDSSSPVSVNVPAGTTITAVAGGAGHSLAV----- 108
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPN------------TIICQVSCGSVHVVAL 182
S WG N F +L G P+ T + +S G VH +A+
Sbjct: 109 ----TSAGTALAWGDNA---FGQLGDGTTIPSSSTPVAVDVPAGTTVTALSGGGVHNLAV 161
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
+ G AWG N +GQLG G T + P IT V+ G+ HS A
Sbjct: 162 TSAGTALAWGDNFWGQLGDGSTT---------RSRTPVAVNVPAGTTITAVAAGQGHSLA 212
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
V+ G WG S GQLG + +P G I VA GG+HS ALTS G
Sbjct: 213 VTSAGTALAWGDNSSGQLGDGTAT---DSSIPVAADVPAGTTITAVAAGGLHSLALTSGG 269
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNG--VQLVACGHSHTLV 359
+ AWG + +GQLG G T S + P+ V VP G V VA G H+L
Sbjct: 270 DVLAWGANGSGQLGDGTTTSS-------------STPVAVDVPAGTTVTAVAAGGRHSLA 316
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
G + WG N+ GQ + +T++ P V+ G + +A G GHS
Sbjct: 317 VTSAGDVLAWGDNTAGQLGDGSTTHSSTPVAVNVPAGTTITAVATGSGHS 366
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 68/171 (39%), Gaps = 31/171 (18%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+ WG N SGQ G G P + PAG + +A G H+ AV S G
Sbjct: 271 VLAWGANGSGQLG-DGTTTSSSTPVAV-----DVPAG--TTVTAVAAGGRHSLAVTSAGD 322
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ WG N GQLGDG+ P V + +++ G+ + A+ ST
Sbjct: 323 VLAWGDNTAGQLGDGSTTHSSTPVAVNVPAGTTITAVATGSGHSLAV---------TSTD 373
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPN-----------TIICQVSCGSVHVVAL 182
WG N F +L G+ T + T + ++ GS H +A+
Sbjct: 374 TALAWGDN---TFGQLGDGSTTSSIIPVAVDLPAGTTVTAIAGGSFHSLAI 421
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 62/149 (41%), Gaps = 18/149 (12%)
Query: 271 ELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNE 330
LL V+ + + V GV S A G AWG + AG+LG G T S S
Sbjct: 29 PLLVAIVLGVTSVGAARVLAQGVPSAAAGPPGTGLAWGTNSAGRLGDGTTTDSSS----- 83
Query: 331 SDTYFRNIPILV-VPNGVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKST-YAW 386
P+ V VP G + VA G H+L G WG N++GQ + + +
Sbjct: 84 --------PVSVNVPAGTTITAVAGGAGHSLAVTSAGTALAWGDNAFGQLGDGTTIPSSS 135
Query: 387 YPSPVDWCVG-EVRKLAAGGGHSAVLADA 414
P VD G V L+ GG H+ + A
Sbjct: 136 TPVAVDVPAGTTVTALSGGGVHNLAVTSA 164
>gi|148700104|gb|EDL32051.1| hect domain and RLD 4, isoform CRA_a [Mus musculus]
Length = 546
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/372 (30%), Positives = 174/372 (46%), Gaps = 41/372 (11%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+ WG GQ G G + ++ + P++ + F N + D+ CG HT V DG
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRR--SDFF-----VNKKVRDVGCGLRHTVFVLDDG 53
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTI 139
T++T G N+ GQLG E+ RK PE+V L ++ + +++CG T A+ + + G
Sbjct: 54 TVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLD 111
Query: 140 STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
S +L + G + PR + I QV+CG H +ALS+ + WG N+YGQL
Sbjct: 112 SDGQLGLQGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQL 169
Query: 200 GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ 259
G GI C+ P++IK QV+ G HS ++ +G ++ WG GQ
Sbjct: 170 GLGIDCQKQTSPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LG L + +P + +L I + CG H+ ALT +G ++ +G GQ LG
Sbjct: 222 LG---LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGH 276
Query: 320 QTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ-- 376
+ S + P + +I V VACG HT ++ GRI+ +G GQ
Sbjct: 277 NSTSHEINPRKVFELMGSI--------VTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Query: 377 ---AANEKSTYA 385
+N KS +
Sbjct: 329 TGSTSNRKSPFT 340
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG +GQLG G EE P + ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I V+CG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVACGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGIDCQKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFV 310
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G +G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLQGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG G + + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQV+CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQVACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + Q + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GIDCQKQTSPQLIKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYN 194
T +GQ N S+ PR + +I+ QV+CG H A + G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQVACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGST-SNRKSPFTVKG 343
>gi|149043902|gb|EDL97353.1| rCG61079, isoform CRA_b [Rattus norvegicus]
Length = 1049
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 159/341 (46%), Gaps = 62/341 (18%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRK--SDFF-----VNKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLQGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKG--------------------------------------------YA 218
I C+ P++IK Y
Sbjct: 173 IECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV 232
Query: 219 KFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
L ++ +KI + CGE H+AA+++ G V+T+G G GQLGH S E+ PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH---NSTSHEINPRKVF 289
Query: 279 ALDGIFIKDVACGGVHSCALT-SKGALYAWGGSQAGQLGLG 318
L G + +ACG H+ A S G +Y++G GQLG G
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG +GQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGIECQKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G +G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLQGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG G E + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G E Q + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GIECQKQTSPQLIKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A + G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|149043903|gb|EDL97354.1| rCG61079, isoform CRA_c [Rattus norvegicus]
Length = 928
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 161/341 (47%), Gaps = 62/341 (18%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRK--SDFF-----VNKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLQGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIK-----------------------------GYAKF------------- 220
I C+ P++IK G KF
Sbjct: 173 IECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV 232
Query: 221 --LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
L ++ +KI + CGE H+AA+++ G V+T+G G GQLGH S E+ PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH---NSTSHEINPRKVF 289
Query: 279 ALDGIFIKDVACGGVHSCALT-SKGALYAWGGSQAGQLGLG 318
L G + +ACG H+ A S G +Y++G GQLG G
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG +GQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGIECQKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G +G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLQGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG G E + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G E Q + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GIECQKQTSPQLIKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGST-SNRKSPFTVKG 343
>gi|387019663|gb|AFJ51949.1| putative E3 ubiquitin-protein ligase HERC4-like [Crotalus
adamanteus]
Length = 1052
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 162/351 (46%), Gaps = 62/351 (17%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ C N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRR-------CSFFVNKKVQDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G
Sbjct: 57 TCGCNDLGQLGH--EKSRKRPEQVGALDAQNIVTVSCGEAHTLALNDKGQVYAWGFAVDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + + PR + I QV+CG H +ALS+ + +WG N+YGQLG G
Sbjct: 115 QLGLSGTEEYTRVPRNIKS--LSDIQIVQVACGYFHSLALSKGSEVFSWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKG--------------------------------------------YA 218
+ P++IK Y
Sbjct: 173 YEYKKQASPQIIKSLLGIPFAQIAAGGAHSFVLTLSGAVFGWGRNKFGQLGLNDENDRYV 232
Query: 219 KFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
L ++ +KI +SCGE H+AA+++ G V+T+G G GQLGH S E+ PR+V
Sbjct: 233 PNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGH---NSTAHEINPRKVF 289
Query: 279 ALDGIFIKDVACGGVHSCALT-SKGALYAWGGSQAGQLGLGPQTRSFSLIP 328
L G + +ACG H+ A S G +Y++G GQLG+G + S P
Sbjct: 290 ELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGTTSNRKSPFP 340
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/336 (30%), Positives = 158/336 (47%), Gaps = 32/336 (9%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P + ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRRCSFFVNKKVQDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P GA I+ VSCG H +AL++ G + AWG+ G
Sbjct: 57 TCGCNDLGQLGHEKSRKRPEQV-GALDAQNIVT-VSCGEAHTLALNDKGQVYAWGFAVDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG T E + PR IK + +I QV+CG +HS A+S+ EV++WG
Sbjct: 115 QLGLSGTEEYTRVPRNIKSLSDI--------QIVQVACGYFHSLALSKGSEVFSWGQNKY 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG K+ P+ + +L GI +A GG HS LT GA++ WG ++ GQLGL
Sbjct: 167 GQLGLGY--EYKKQASPQIIKSLLGIPFAQIAAGGAHSFVLTLSGAVFGWGRNKFGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+E+D Y N+ + + ++CG HT ++G + +G YGQ
Sbjct: 225 N----------DENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQL 274
Query: 378 ANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
+ + + P V +G V ++A G H++
Sbjct: 275 GHNSTAHEINPRKVFELMGNIVTQIACGRQHTSAFV 310
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 124/256 (48%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG+ GQ G G E R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGFAVDGQLGLSGTEEYTRVPRNI-------KSLSDIQIVQVACGYFHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTEEGRK-HPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F+WG N++GQLG G E ++ P+ +K L F + + GAH
Sbjct: 155 GSEVFSWGQNKYGQLGLGYEYKKQASPQIIKSLLGIPFAQIAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I +SCG H AL++ G
Sbjct: 206 TLSGA-VFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTAHEINPRKVFELMGNI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
G +Y++GLG GQLG
Sbjct: 313 TGRIYSFGLGGNGQLG 328
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 93/203 (45%), Gaps = 22/203 (10%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G E + + Q+ L G P + IA G H+ +
Sbjct: 156 SEVFSWGQNKYGQLGL-GYEYKKQASPQIIKSLLGIP------FAQIAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + ISCG TAA+ + +G +
Sbjct: 209 GAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQNQGSNF------PRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGY 193
T +GQ G N PR + I+ Q++CG H A G + ++G
Sbjct: 265 TFGAGGYGQ-LGHNSTAHEINPRKVFELM--GNIVTQIACGRQHTSAFVPSTGRIYSFGL 321
Query: 194 NEYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 322 GGNGQLGMG-TTSNRKSPFPVKG 343
>gi|58865718|ref|NP_001012074.1| probable E3 ubiquitin-protein ligase HERC4 [Rattus norvegicus]
gi|81883244|sp|Q5PQN1.1|HERC4_RAT RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
gi|56269464|gb|AAH87104.1| Hect domain and RLD 4 [Rattus norvegicus]
Length = 1057
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/369 (30%), Positives = 173/369 (46%), Gaps = 41/369 (11%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRK--SDFF-----VNKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLQGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
I C+ P++IK QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 IECQKQTSPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA 385
+N KS +
Sbjct: 332 TSNRKSPFT 340
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG +GQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGIECQKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G +G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLQGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG G E + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G E Q + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GIECQKQTSPQLIKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A + G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|149689920|ref|XP_001503636.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Equus caballus]
Length = 1057
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 157/336 (46%), Gaps = 32/336 (9%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + +DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVL----HDGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG K+ P+ + +L GI VA GG HS LT GA++ WG ++ GQLGL
Sbjct: 167 GQLGLGI--DYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+E+D YF N+ + + + CG HT ++G + +G YGQ
Sbjct: 225 N----------DENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Query: 378 ANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
+ +++ P V +G V ++A G H++
Sbjct: 275 GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 120/403 (29%), Positives = 185/403 (45%), Gaps = 52/403 (12%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKKVRDVGCGLRHTVFVLHDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLLGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
I + P++IK QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 IDYKKQASPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYPS----PVDWCVGE---VRKLAAGGGHS 408
+N KS + W+P P D E V+++ +GG S
Sbjct: 332 TSNRKSPFTVKGNWFPYNGQCPTDIDSEEYFCVKRIFSGGDQS 374
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 124/255 (48%), Gaps = 41/255 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTEEGRK-HPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG G + ++ P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQ----GSN------FPRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
T+S + ++ WG+N+ G N FP L T I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQK--IVYICCGEDHTAALTKEGG 262
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSEN 246
+ +G YGQLG T + +V + +TQ++CG H++A V +
Sbjct: 263 VFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPSS 313
Query: 247 GEVYTWGLGSVGQLG 261
G +Y++GLG GQLG
Sbjct: 314 GRIYSFGLGGNGQLG 328
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GIDYKKQASPQLIKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+++ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A + G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|149689922|ref|XP_001503631.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Equus caballus]
Length = 1049
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 157/336 (46%), Gaps = 32/336 (9%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + +DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVL----HDGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG K+ P+ + +L GI VA GG HS LT GA++ WG ++ GQLGL
Sbjct: 167 GQLGLGI--DYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+E+D YF N+ + + + CG HT ++G + +G YGQ
Sbjct: 225 N----------DENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Query: 378 ANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
+ +++ P V +G V ++A G H++
Sbjct: 275 GHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 120/403 (29%), Positives = 185/403 (45%), Gaps = 52/403 (12%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKKVRDVGCGLRHTVFVLHDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLLGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
I + P++IK QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 IDYKKQASPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYPS----PVDWCVGE---VRKLAAGGGHS 408
+N KS + W+P P D E V+++ +GG S
Sbjct: 332 TSNRKSPFTVKGNWFPYNGQCPTDIDSEEYFCVKRIFSGGDQS 374
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 123/255 (48%), Gaps = 41/255 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTEEGRK-HPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG G + ++ P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQ----GSN------FPRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
T+S + ++ WG+N+ G N FP L T I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQK--IVYICCGEDHTAALTKEGG 262
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH-SAAVSEN 246
+ +G YGQLG T + +V + +TQ++CG H SA V +
Sbjct: 263 VFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPSS 313
Query: 247 GEVYTWGLGSVGQLG 261
G +Y++GLG GQLG
Sbjct: 314 GRIYSFGLGGNGQLG 328
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GIDYKKQASPQLIKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+++ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|297686826|ref|XP_002820939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Pongo abelii]
Length = 1057
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 175/376 (46%), Gaps = 45/376 (11%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLVGSEECIRVPRNIKS--LSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
C+ P+++K QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 TDCKKQTSPQLLKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYP 388
+N KS + WYP
Sbjct: 332 TSNRKSPFTVKGNWYP 347
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 156/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG HS A+S+ EV+ WG
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDI--------QIVQVACGYCHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGTDCKKQTS-----PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLVGSEECIRVPRNI-------KSLSDIQIVQVACGYCHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG GT+ + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GTDCKKQTSPQLLKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|226495309|ref|NP_001141147.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
gi|194702882|gb|ACF85525.1| unknown [Zea mays]
gi|224030327|gb|ACN34239.1| unknown [Zea mays]
gi|414587150|tpg|DAA37721.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 443
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/321 (30%), Positives = 158/321 (49%), Gaps = 44/321 (13%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++ G H+ A+ + L +WG E GQLG G E R P + + + S+ CGA T
Sbjct: 18 VSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVICGADHT 77
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCG 175
A +E W WG +F RL G FTP + I Q++CG
Sbjct: 78 TAYSEDELQ------VYSWGWG-----DFGRLGHGNSSDVFTPQPVKALQGLKIKQIACG 126
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
H +A++ G +Q+WG N+ GQLG G T + L P+ I+ + + ++
Sbjct: 127 DSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLL-PQKIQAFESVC--------VKMIAA 177
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
G H+AAV+E+G++Y WG G G LG L + LLP +V +++G + VACG H+
Sbjct: 178 GAEHTAAVTEDGDLYGWGWGRYGNLG---LGDRNDRLLPEKVSSVEGEKMVLVACGWRHT 234
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS 355
++ G LY +G S+ GQLG G L+P++ + + + ++ G
Sbjct: 235 ITVSDSGNLYTYGWSKYGQLGHG--DFEDHLVPHKVEALKDST--------ISQISGGWR 284
Query: 356 HTLVYMRDGRIHGWGYNSYGQ 376
HT+ +G+++GWG+N +GQ
Sbjct: 285 HTMALTSEGKLYGWGWNKFGQ 305
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 113/364 (31%), Positives = 163/364 (44%), Gaps = 50/364 (13%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG-TLF 84
WG GQ G E +L +P L G A A + + CG +HT A + D ++
Sbjct: 37 WGRGEDGQLGHGDAEDRL-----VPTVLSGFDAPAITS---VICGADHTTAYSEDELQVY 88
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGTISTSR 143
+WG +FG+LG G P+ VK LQ +K I+CG +HC A G + +
Sbjct: 89 SWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDSHCLAVTMA-----GEVQS-- 141
Query: 144 LWVWGQNQ------GSNFPRLFWGAFTPNTIIC--QVSCGSVHVVALSECGLLQAWGYNE 195
WG+NQ G+ L +C ++ G+ H A++E G L WG+
Sbjct: 142 ---WGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGR 198
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
YG LG G + L +V + E EK+ V+CG H+ VS++G +YT+G
Sbjct: 199 YGNLGLGDRNDRLLPEKV---------SSVEGEKMVLVACGWRHTITVSDSGNLYTYGWS 249
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
GQLGH + L+P +V AL I ++ G H+ ALTS+G LY WG ++ GQ+
Sbjct: 250 KYGQLGHGDFED---HLVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQV 306
Query: 316 GLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
G+G N D + VACG HTL + WG + G
Sbjct: 307 GVG----------NNDDHSSPGQVSFPEDQKISQVACGWRHTLALSEKKNVFSWGRGTSG 356
Query: 376 QAAN 379
Q N
Sbjct: 357 QLGN 360
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 153/331 (46%), Gaps = 56/331 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG+ G+ G G + P+ + A + IACG H AV G
Sbjct: 87 VYSWGWGDFGRLGH-GNSSDVFTPQPVK-------ALQGLKIKQIACGDSHCLAVTMAGE 138
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ +WG N+ GQLG GT E P+K++ +S VK I+ GA TAA+ E DG +
Sbjct: 139 VQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTE----DGDLYG- 193
Query: 143 RLWVWGQ----NQGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
W WG+ G RL P + + V+CG H + +S+ G L +
Sbjct: 194 --WGWGRYGNLGLGDRNDRLL-----PEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTY 246
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G+++YGQLG G + L +V EA + I+Q+S G H+ A++ G++Y
Sbjct: 247 GWSKYGQLGHGDFEDHLVPHKV---------EALKDSTISQISGGWRHTMALTSEGKLYG 297
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG GQ+G + + D P +V + I VACG H+ AL+ K +++WG
Sbjct: 298 WGWNKFGQVG---VGNNDDHSSPGQVSFPEDQKISQVACGWRHTLALSEKKNVFSWGRGT 354
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
+GQLG G + RN P+L+
Sbjct: 355 SGQLGNG-------------EIVDRNTPVLI 372
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 128/256 (50%), Gaps = 24/256 (9%)
Query: 164 TPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDE 223
+P + VS G+ H VAL +L +WG E GQLG G + L P V+ G+ +
Sbjct: 10 SPPQTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLV-PTVLSGF-----D 63
Query: 224 APELEKITQVSCGEYHSAAVSENG-EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG 282
AP IT V CG H+ A SE+ +VY+WG G G+LGH + P+ V AL G
Sbjct: 64 AP---AITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHG---NSSDVFTPQPVKALQG 117
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
+ IK +ACG H A+T G + +WG +Q GQLGLG T SL+P + F ++
Sbjct: 118 LKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLG--TTEDSLLPQKIQA-FESVC--- 171
Query: 343 VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLA 402
V+++A G HT DG ++GWG+ YG P V GE L
Sbjct: 172 ----VKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLV 227
Query: 403 A-GGGHSAVLADACSL 417
A G H+ ++D+ +L
Sbjct: 228 ACGWRHTITVSDSGNL 243
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 10/99 (10%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLP-PELFGCPAGANSRWLDIACGHEHTA 75
+ ++ +Y WG+N GQ G G P Q+ PE + + +ACG HT
Sbjct: 289 LTSEGKLYGWGWNKFGQVG-VGNNDDHSSPGQVSFPE--------DQKISQVACGWRHTL 339
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSE 114
A++ +F+WG GQLG+G R P + L S+
Sbjct: 340 ALSEKKNVFSWGRGTSGQLGNGEIVDRNTPVLIDALSSD 378
>gi|395741726|ref|XP_003777632.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Pongo
abelii]
Length = 1049
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 175/376 (46%), Gaps = 45/376 (11%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLVGSEECIRVPRNIKS--LSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
C+ P+++K QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 TDCKKQTSPQLLKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYP 388
+N KS + WYP
Sbjct: 332 TSNRKSPFTVKGNWYP 347
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 156/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG HS A+S+ EV+ WG
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDI--------QIVQVACGYCHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGTDCKKQTS-----PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 125/256 (48%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLVGSEECIRVPRNI-------KSLSDIQIVQVACGYCHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG GT+ + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH-SAAVSE 245
+ +G YGQLG T + +V + +TQ++CG H SA V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GTDCKKQTSPQLLKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|126330678|ref|XP_001365078.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Monodelphis
domestica]
Length = 1051
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/312 (34%), Positives = 155/312 (49%), Gaps = 52/312 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G ER+ P+Q+ A A+ + +ACG H+ A++ G
Sbjct: 56 VYTCGLNTKGQLGH---EREGNKPEQIG-------ALADQHIIHVACGESHSLALSDQGQ 105
Query: 83 LFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
LF+WGA GQLG TE+ P +K+L + + +SCG HC A A DG
Sbjct: 106 LFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMALAA-----DG--- 157
Query: 141 TSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
+ + WGQN+ G FP +P + + QV+ G H ALS G
Sbjct: 158 --QFFTWGQNRHGQLGLGKEFP----SQASPQRVKSLEGIPLAQVAAGGAHSFALSLSGA 211
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ WG N GQLG + Q P + K L +K+ +SCGE H+A ++++G
Sbjct: 212 VFGWGRNNAGQLGLSDETDR-QSP----CHVKLL----RTQKVVYISCGEEHTAVLTKSG 262
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYA 306
V+T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG H+ A S G +YA
Sbjct: 263 GVFTFGAGSFGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 319
Query: 307 WGGSQAGQLGLG 318
+G GQLG G
Sbjct: 320 FGCGARGQLGTG 331
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 150/306 (49%), Gaps = 30/306 (9%)
Query: 116 VKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQ---NQGSNFPRLFWGAFTPNTIICQV 172
+K ++CG + + + E DG + T L GQ + N P GA II V
Sbjct: 37 IKEVACGGNHSIFLLE----DGEVYTCGLNTKGQLGHEREGNKPEQI-GALADQHII-HV 90
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
+CG H +ALS+ G L +WG GQLG T + + PR+IK + + I Q
Sbjct: 91 ACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQ--------QMILQ 142
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
VSCG +H A++ +G+ +TWG GQLG + + P+RV +L+GI + VA GG
Sbjct: 143 VSCGNWHCMALAADGQFFTWGQNRHGQLGLG--KEFPSQASPQRVKSLEGIPLAQVAAGG 200
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVAC 352
HS AL+ GA++ WG + AGQLGL +T +S + + L+ V ++C
Sbjct: 201 AHSFALSLSGAVFGWGRNNAGQLGLSDETD------RQSPCHVK----LLRTQKVVYISC 250
Query: 353 GHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
G HT V + G + +G S+GQ ++ P V +G EV ++A G H+
Sbjct: 251 GEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAF 310
Query: 412 ADACSL 417
+ L
Sbjct: 311 VPSSGL 316
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 145/343 (42%), Gaps = 63/343 (18%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIP---KQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
++ WG GQ G E + IP K+L ++ L ++CG+ H A+A+
Sbjct: 106 LFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMI----------LQVSCGNWHCMALAA 155
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG FTWG N GQLG G E + P++VK L+ + ++ G + A++
Sbjct: 156 DGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALS-------- 207
Query: 139 ISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQV-----------SCGSVHVVALSECGL 187
+ ++ WG+N N +L T C V SCG H L++ G
Sbjct: 208 -LSGAVFGWGRN---NAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 263
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSEN 246
+ +G +GQLG + + RV++ ++TQ++CG H+ A V +
Sbjct: 264 VFTFGAGSFGQLGHDSMNDEVNPRRVLELMGS---------EVTQIACGRQHTLAFVPSS 314
Query: 247 GEVYTWGLGSVGQLG---HCSLQ---------SGDKELLPRRVVALDGIFIKDVACGGVH 294
G +Y +G G+ GQLG C+++ + L R + +K + GG
Sbjct: 315 GLIYAFGCGARGQLGTGHTCNVKCPSPVKGHWAAHNGQLSSRADSFKYHIVKHIFSGGDQ 374
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRN 337
+ L SK S A + Q + SLI +E+ +R
Sbjct: 375 TFVLCSKYE----NSSPADDFRIMNQAQYTSLINDETIAIWRQ 413
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 95/208 (45%), Gaps = 22/208 (10%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A + WG N GQ G G+E + Q L G P +A G H+ A
Sbjct: 153 LAADGQFFTWGQNRHGQLGL-GKEFPSQASPQRVKSLEGIPLA------QVAAGGAHSFA 205
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
++ G +F WG N GQLG E R+ P VK L+++ V ISCG TA + +
Sbjct: 206 LSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTK----S 261
Query: 137 GTISTSRLWVWGQ------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQ 189
G + T +GQ N N PR + + Q++CG H +A + GL+
Sbjct: 262 GGVFTFGAGSFGQLGHDSMNDEVN-PRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 318
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGY 217
A+G GQLG G TC ++ P +KG+
Sbjct: 319 AFGCGARGQLGTGHTC-NVKCPSPVKGH 345
>gi|114321834|ref|YP_743517.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
ehrlichii MLHE-1]
gi|114228228|gb|ABI58027.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
ehrlichii MLHE-1]
Length = 821
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 123/367 (33%), Positives = 166/367 (45%), Gaps = 57/367 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +++ WG NHSGQ G G P Q+ G +S W ++ G EHT A
Sbjct: 488 VKADGSLWGWGRNHSGQLGL-GDTDDRHAPVQV---------GGDSDWTSLSVGREHTLA 537
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V +DGTL+ WG N GQLG G + RK PE+V S++ ++S G T A+ ++D
Sbjct: 538 VKADGTLWGWGQNYNGQLGLGDTDDRKTPERVGS-DSDWA-TVSAGTGYTLAV----KDD 591
Query: 137 GTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
GT LW WG+N G R + VS GS H +A+ G L A
Sbjct: 592 GT-----LWAWGRNSHGQLGLGDTNNRDAPVQVASDNDWAAVSAGSRHTLAVKNDGTLWA 646
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG N GQLG G T + P + + VS G H+ AV +G ++
Sbjct: 647 WGRNSDGQLGLGDT-DNRDVPEQVGSDTDW----------AAVSTGSGHTLAVKTDGTLW 695
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
WG S GQLG L D+ P +V D + V G H+ A+ + G L+ WG +
Sbjct: 696 AWGRNSDGQLG---LGDTDERHAPEQVGG-DSDWAA-VTAGWQHTLAIKNDGTLWGWGLN 750
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG-VQLVACGHSHTLVYMRDGRIHGW 369
GQLGLG DT R+ P+ V + VA G HTL DG + W
Sbjct: 751 LYGQLGLG-------------DTDGRHAPMQVGSDSDWATVAAGRYHTLAVKDDGTLRAW 797
Query: 370 GYNSYGQ 376
G N +GQ
Sbjct: 798 GRNRFGQ 804
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 118/371 (31%), Positives = 171/371 (46%), Gaps = 65/371 (17%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++ WG N+ GQ G E++ P Q+ G+++ W ++ G +T A
Sbjct: 138 MKADGTLWAWGQNNVGQLGLGDTEKR-DTPAQV---------GSDTDWAAVSAGGAYTLA 187
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V DGTL+ WG N FGQLG G + R PE+V S++V ++S G H T A+ + D
Sbjct: 188 VKDDGTLWAWGENYFGQLGLGDTDDRHAPEQVGS-DSDWV-AVSAGRHHTLAL----KAD 241
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSC---------GSVHVVALSECGL 187
GT LW WG+N F +L G T QV G H +A+ E G
Sbjct: 242 GT-----LWAWGRNY---FGQLGLGGTTNRNAPEQVGSHSDWAGVIGGDRHSLAVREDGT 293
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
L +WG N GQLG G T E + P + + + VS G H+ AV +G
Sbjct: 294 LWSWGQNNVGQLGLGDTVE-RRRPEQVGNDSDW----------ATVSAGLLHTLAVKNDG 342
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
++ WG GQLG L D P +V + D + + G +S A+ + G+L++W
Sbjct: 343 TLWAWGGNGFGQLG---LGDTDNRDAPVQVGS-DNDWAA-LNAGQRYSLAVKNDGSLWSW 397
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGR 365
G + G+LGLG DT R+ P V G++ V G HTL DG
Sbjct: 398 GWNDFGELGLG-------------DTDDRHAPEQ-VGGGMEWAAVTAGMYHTLGVKADGT 443
Query: 366 IHGWGYNSYGQ 376
+ WG N +G+
Sbjct: 444 LRAWGRNDFGE 454
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 150/320 (46%), Gaps = 53/320 (16%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+A G HT A+ +DGTL+ WG N GQLG G E R P +V +++ ++S G T
Sbjct: 128 LAAGGVHTLAMKADGTLWAWGQNNVGQLGLGDTEKRDTPAQVGS-DTDWA-AVSAGGAYT 185
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVV 180
A+ ++DGT LW WG+N G R ++ VS G H +
Sbjct: 186 LAV----KDDGT-----LWAWGENYFGQLGLGDTDDRHAPEQVGSDSDWVAVSAGRHHTL 236
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
AL G L AWG N +GQLG G T P + ++ + V G+ HS
Sbjct: 237 ALKADGTLWAWGRNYFGQLGLGGTTN-RNAPEQVGSHSDW----------AGVIGGDRHS 285
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRR---VVALDGIFIKDVACGGVHSCA 297
AV E+G +++WG +VGQLG + + RR V D + V+ G +H+ A
Sbjct: 286 LAVREDGTLWSWGQNNVGQLGLG-------DTVERRRPEQVGNDSDWAT-VSAGLLHTLA 337
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQLVACGHSH 356
+ + G L+AWGG+ GQLGLG DT R+ P+ V N + G +
Sbjct: 338 VKNDGTLWAWGGNGFGQLGLG-------------DTDNRDAPVQVGSDNDWAALNAGQRY 384
Query: 357 TLVYMRDGRIHGWGYNSYGQ 376
+L DG + WG+N +G+
Sbjct: 385 SLAVKNDGSLWSWGWNDFGE 404
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 124/449 (27%), Positives = 182/449 (40%), Gaps = 90/449 (20%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ ++ WG N+ GQ G G P+Q+ G++S W+ ++ G HT A
Sbjct: 188 VKDDGTLWAWGENYFGQLGL-GDTDDRHAPEQV---------GSDSDWVAVSAGRHHTLA 237
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ +DGTL+ WG N FGQLG G R PE+V S++ I H A RE D
Sbjct: 238 LKADGTLWAWGRNYFGQLGLGGTTNRNAPEQVGS-HSDWAGVIGGDRHSLAV----RE-D 291
Query: 137 GTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
GT LW WGQN G R ++ VS G +H +A+ G L A
Sbjct: 292 GT-----LWSWGQNNVGQLGLGDTVERRRPEQVGNDSDWATVSAGLLHTLAVKNDGTLWA 346
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG N +GQLG G T + P + + ++ G+ +S AV +G ++
Sbjct: 347 WGGNGFGQLGLGDT-DNRDAPVQVGSDNDW----------AALNAGQRYSLAVKNDGSLW 395
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
+WG G+LG L D P +V G+ V G H+ + + G L AWG +
Sbjct: 396 SWGWNDFGELG---LGDTDDRHAPEQVGG--GMEWAAVTAGMYHTLGVKADGTLRAWGRN 450
Query: 311 QAGQLGLGPQT-------------------------------------RSFSLIPNESDT 333
G+LGLG R+ S DT
Sbjct: 451 DFGELGLGVMVYITSPLQTVTEADWAAASAGQYQTQAVKADGSLWGWGRNHSGQLGLGDT 510
Query: 334 YFRNIPILVVPNGVQL-VACGHSHTLVYMRDGRIHGWGYNSYGQAA----NEKSTYAWYP 388
R+ P+ V + ++ G HTL DG + GWG N GQ +++ T
Sbjct: 511 DDRHAPVQVGGDSDWTSLSVGREHTLAVKADGTLWGWGQNYNGQLGLGDTDDRKTPERVG 570
Query: 389 SPVDWCVGEVRKLAAGGGHSAVLADACSL 417
S DW ++AG G++ + D +L
Sbjct: 571 SDSDWAT-----VSAGTGYTLAVKDDGTL 594
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 127/422 (30%), Positives = 177/422 (41%), Gaps = 66/422 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A + WG N G+ G G + P Q E + W + G T A
Sbjct: 438 VKADGTLRAWGRNDFGELGL-GVMVYITSPLQTVTE---------ADWAAASAGQYQTQA 487
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V +DG+L+ WG N GQLG G + R P +V S++ S+S G T A+ + D
Sbjct: 488 VKADGSLWGWGRNHSGQLGLGDTDDRHAPVQVGG-DSDWT-SLSVGREHTLAV----KAD 541
Query: 137 GTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
GT LW WGQN G R ++ VS G+ + +A+ + G L A
Sbjct: 542 GT-----LWGWGQNYNGQLGLGDTDDRKTPERVGSDSDWATVSAGTGYTLAVKDDGTLWA 596
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG N +GQLG G T P + + VS G H+ AV +G ++
Sbjct: 597 WGRNSHGQLGLGDTNN-RDAPVQVASDNDW----------AAVSAGSRHTLAVKNDGTLW 645
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
WG S GQLG L D +P +V + D + V+ G H+ A+ + G L+AWG +
Sbjct: 646 AWGRNSDGQLG---LGDTDNRDVPEQVGS-DTDWAA-VSTGSGHTLAVKTDGTLWAWGRN 700
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG-VQLVACGHSHTLVYMRDGRIHGW 369
GQLGLG DT R+ P V + V G HTL DG + GW
Sbjct: 701 SDGQLGLG-------------DTDERHAPEQVGGDSDWAAVTAGWQHTLAIKNDGTLWGW 747
Query: 370 GYNSYGQAANEKSTYAWYPSPV----DWCVGEVRKLAAGGGHSAVLADACSLKELCEFRL 425
G N YGQ + P V DW +AAG H+ + D +L+ R
Sbjct: 748 GLNLYGQLGLGDTDGRHAPMQVGSDSDWAT-----VAAGRYHTLAVKDDGTLRAWGRNRF 802
Query: 426 AE 427
+
Sbjct: 803 GQ 804
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 140/306 (45%), Gaps = 43/306 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++ WG N++GQ G G + P+++ G++S W ++ G +T A
Sbjct: 538 VKADGTLWGWGQNYNGQLGL-GDTDDRKTPERV---------GSDSDWATVSAGTGYTLA 587
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V DGTL+ WG N GQLG G R P +V ++S G+ T A+ +ND
Sbjct: 588 VKDDGTLWAWGRNSHGQLGLGDTNNRDAPVQVAS--DNDWAAVSAGSRHTLAV----KND 641
Query: 137 GTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
GT LW WG+N G R +T VS GS H +A+ G L A
Sbjct: 642 GT-----LWAWGRNSDGQLGLGDTDNRDVPEQVGSDTDWAAVSTGSGHTLAVKTDGTLWA 696
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG N GQLG G T E P + G + + V+ G H+ A+ +G ++
Sbjct: 697 WGRNSDGQLGLGDTDE-RHAPEQVGGDSDW----------AAVTAGWQHTLAIKNDGTLW 745
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
WGL GQLG L D P +V + D + VA G H+ A+ G L AWG +
Sbjct: 746 GWGLNLYGQLG---LGDTDGRHAPMQVGS-DSDWAT-VAAGRYHTLAVKDDGTLRAWGRN 800
Query: 311 QAGQLG 316
+ GQLG
Sbjct: 801 RFGQLG 806
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 117/264 (44%), Gaps = 38/264 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ ++ WG N GQ G G P Q+ +++ W ++ G HT A
Sbjct: 588 VKDDGTLWAWGRNSHGQLGL-GDTNNRDAPVQVA---------SDNDWAAVSAGSRHTLA 637
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V +DGTL+ WG N GQLG G + R PE+V +++ ++S G+ T A+ + D
Sbjct: 638 VKNDGTLWAWGRNSDGQLGLGDTDNRDVPEQVGS-DTDWA-AVSTGSGHTLAV----KTD 691
Query: 137 GTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
GT LW WG+N G R ++ V+ G H +A+ G L
Sbjct: 692 GT-----LWAWGRNSDGQLGLGDTDERHAPEQVGGDSDWAAVTAGWQHTLAIKNDGTLWG 746
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG N YGQLG G T +G P + + + V+ G YH+ AV ++G +
Sbjct: 747 WGLNLYGQLGLGDT-DGRHAPMQVGSDSDW----------ATVAAGRYHTLAVKDDGTLR 795
Query: 251 TWGLGSVGQLGHCSLQSGDKELLP 274
WG GQLG + + + +P
Sbjct: 796 AWGRNRFGQLGQRTYRFDQPQEVP 819
>gi|281205822|gb|EFA80011.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 1800
Score = 142 bits (359), Expect = 3e-31, Method: Composition-based stats.
Identities = 106/399 (26%), Positives = 174/399 (43%), Gaps = 96/399 (24%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKH--PEKVKQLQSEFVKSISCG 122
+ +ACG EH A ++SDG LFTWG N GQLG G G+ P +V+ +S + ISCG
Sbjct: 1035 VSVACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIMISCG 1094
Query: 123 AHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI------------IC 170
+ A+ + + +++ WG S + +L G TP + +
Sbjct: 1095 GEHSVAVDQ---------SFQIYSWGS---SRYGQLGHGVLTPQNLPKKIEDFTGGQKVL 1142
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL--- 227
++ G H + L + G L +G+N+ GQLG G + P I E E+
Sbjct: 1143 AIATGYAHTMVLKKSGDLFTFGWNDSGQLGLG-NFKNRAVPMRI--------ETSEIVGI 1193
Query: 228 --EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFI 285
E+IT ++ G HS +NG++Y+WG S GQLGH +++ K L P+++ L G I
Sbjct: 1194 HGERITAIAAGHSHSIMCLDNGDIYSWGANSKGQLGHGNIE---KSLRPKQIDELKGKPI 1250
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLG-------LGPQ------------------ 320
++CG H+ A++ ++Y WG + LG L P+
Sbjct: 1251 IKISCGHFHTVAISELNSVYCWGQGEHMCLGNGSNKNELSPKMIEFFINKKIEKVVCGLY 1310
Query: 321 -TRSFSLIPNESD-----------------------TYFRNIPILVVP--NGVQLV--AC 352
T + + N SD +F V+P N + +V +
Sbjct: 1311 HTATVTAAENGSDRGNVYICGGGEHGKLGTGGDLKTPFFDKPHPAVIPSLNSMNIVGFSS 1370
Query: 353 GHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
G + + +G ++ WGY ++GQ N K+ W P+ +
Sbjct: 1371 GSEFSAIITNNGALYTWGYGNFGQIGNGKTEDMWLPTKI 1409
Score = 111 bits (278), Expect = 6e-22, Method: Composition-based stats.
Identities = 77/276 (27%), Positives = 133/276 (48%), Gaps = 24/276 (8%)
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQG-PRVIKGYAKFLDEAPELEKI 230
V+CG H+ +S G L WG N GQLG G+ Q PR ++ + I
Sbjct: 1037 VACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKS--------SPI 1088
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG-IFIKDVA 289
+SCG HS AV ++ ++Y+WG GQLGH L + LP+++ G + +A
Sbjct: 1089 IMISCGGEHSVAVDQSFQIYSWGSSRYGQLGHGVLTPQN---LPKKIEDFTGGQKVLAIA 1145
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGP-QTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
G H+ L G L+ +G + +GQLGLG + R+ + S+ + + +
Sbjct: 1146 TGYAHTMVLKKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIETSEI------VGIHGERIT 1199
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGH 407
+A GHSH+++ + +G I+ WG NS GQ + + P +D G+ + K++ G H
Sbjct: 1200 AIAAGHSHSIMCLDNGDIYSWGANSKGQLGHGNIEKSLRPKQIDELKGKPIIKISCGHFH 1259
Query: 408 SAVLADACSLKELCEFRLAESVTLSNASEIEDVASR 443
+ +++ L + + E + L N S +++ +
Sbjct: 1260 TVAISE---LNSVYCWGQGEHMCLGNGSNKNELSPK 1292
Score = 110 bits (276), Expect = 1e-21, Method: Composition-based stats.
Identities = 96/316 (30%), Positives = 138/316 (43%), Gaps = 44/316 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
IY WG + GQ G + P+ LP ++ G + L IA G+ HT + G
Sbjct: 1107 IYSWGSSRYGQLGHG-----VLTPQNLPKKIEDFTGG--QKVLAIATGYAHTMVLKKSGD 1159
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G N+ GQLG G + R P +++ SE V G TA A + +
Sbjct: 1160 LFTFGWNDSGQLGLGNFKNRAVPMRIET--SEIVGI--HGERITAIAAGHSHSIMCLDNG 1215
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
++ WG N + P I I ++SCG H VA+SE + WG
Sbjct: 1216 DIYSWGANSKGQLGHGNIEKSLRPKQIDELKGKPIIKISCGHFHTVAISELNSVYCWGQG 1275
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV------SENGE 248
E+ LG G L P++I+ + +KI +V CG YH+A V S+ G
Sbjct: 1276 EHMCLGNGSNKNELS-PKMIEFFIN--------KKIEKVVCGLYHTATVTAAENGSDRGN 1326
Query: 249 VYTWGLGSVGQLGHCSLQSGD------KELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VY G G G+LG GD + P + +L+ + I + G S +T+ G
Sbjct: 1327 VYICGGGEHGKLG----TGGDLKTPFFDKPHPAVIPSLNSMNIVGFSSGSEFSAIITNNG 1382
Query: 303 ALYAWGGSQAGQLGLG 318
ALY WG GQ+G G
Sbjct: 1383 ALYTWGYGNFGQIGNG 1398
Score = 99.8 bits (247), Expect = 3e-18, Method: Composition-based stats.
Identities = 84/314 (26%), Positives = 141/314 (44%), Gaps = 48/314 (15%)
Query: 118 SISCGAHCTAAIAEPRENDGTISTSRLWVWGQN-QGSNFPRLFWGAF--TPNTI------ 168
S++CG A I+ S L+ WG N QG L G + TP +
Sbjct: 1036 SVACGWEHIAVIS---------SDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSS 1086
Query: 169 -ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGI-TCEGLQGPRVIKGYAKFLDEAPE 226
I +SCG H VA+ + + +WG + YGQLG G+ T + L P+ I+ +
Sbjct: 1087 PIIMISCGGEHSVAVDQSFQIYSWGSSRYGQLGHGVLTPQNL--PKKIEDFTGG------ 1138
Query: 227 LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV-----VALD 281
+K+ ++ G H+ + ++G+++T+G GQLG L + +P R+ V +
Sbjct: 1139 -QKVLAIATGYAHTMVLKKSGDLFTFGWNDSGQLG---LGNFKNRAVPMRIETSEIVGIH 1194
Query: 282 GIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL 341
G I +A G HS G +Y+WG + GQLG G +S L P + D + PI+
Sbjct: 1195 GERITAIAAGHSHSIMCLDNGDIYSWGANSKGQLGHGNIEKS--LRPKQIDE-LKGKPII 1251
Query: 342 VVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRK 400
+ +CGH HT+ ++ WG + N + P +++ + ++ K
Sbjct: 1252 KI-------SCGHFHTVAISELNSVYCWGQGEHMCLGNGSNKNELSPKMIEFFINKKIEK 1304
Query: 401 LAAGGGHSAVLADA 414
+ G H+A + A
Sbjct: 1305 VVCGLYHTATVTAA 1318
Score = 47.4 bits (111), Expect = 0.018, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Query: 10 TARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIAC 69
T +N + +Y+ G G+ G+ G L+ P P P+ + + +
Sbjct: 1314 TVTAAENGSDRGNVYICG---GGEHGKLGTGGDLKTPFFDKPHPAVIPSLNSMNIVGFSS 1370
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFV 116
G E +A + ++G L+TWG FGQ+G+G E P K+ F+
Sbjct: 1371 GSEFSAIITNNGALYTWGYGNFGQIGNGKTEDMWLPTKISLNDQRFM 1417
>gi|297686828|ref|XP_002820940.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Pongo abelii]
Length = 979
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 175/376 (46%), Gaps = 45/376 (11%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLVGSEECIRVPRNIKS--LSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
C+ P+++K QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 TDCKKQTSPQLLKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYP 388
+N KS + WYP
Sbjct: 332 TSNRKSPFTVKGNWYP 347
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 156/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG HS A+S+ EV+ WG
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDI--------QIVQVACGYCHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGTDCKKQTS-----PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLVGSEECIRVPRNI-------KSLSDIQIVQVACGYCHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG GT+ + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GTDCKKQTSPQLLKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A + G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGST-SNRKSPFTVKG 343
>gi|374296377|ref|YP_005046568.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium clariflavum DSM 19732]
gi|359825871|gb|AEV68644.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium clariflavum DSM 19732]
Length = 819
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 175/406 (43%), Gaps = 65/406 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WGYN GQ G RIPK++ + +A G H+ A+ DGT
Sbjct: 130 VWTWGYNSYGQLGLGEAGEIERIPKKIE---------GLEDVIKVAAGSRHSLALKKDGT 180
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG N +GQLGD + R P +VK L VK I G + A+ +DGT+
Sbjct: 181 VWAWGYNYYGQLGDESNIRRNTPVQVKGLTG--VKDIDAGDFFSVAL----RDDGTV--- 231
Query: 143 RLWVWGQNQ----------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
W WG N SN P G + I Q+S G HV+AL + + WG
Sbjct: 232 --WGWGYNYKGQIGCGTGINSNVPLQTVGV----SNITQISAGDEHVLALDKDKNVWGWG 285
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
+ GQLG G L+ P + + + + V G SAA+ E+G ++ W
Sbjct: 286 AGDKGQLGNGTAASFLRIPEKLSSFTE----------VKSVKAGTMVSAAIKEDGTLWIW 335
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G + G +G+ + + V D IK V + AL + G ++ WG +
Sbjct: 336 GDNTYGIMGNS------RNINSSPVQRKDISGIKAVELNQYCAAALKNDGTVWTWGKNIN 389
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG-VQLVACGHSHTLVYMRDGRIHGWGY 371
G LGLG S IP +V G V++++CG +H + DG + WGY
Sbjct: 390 GILGLGTALDS-------------QIPSVVSGTGDVEVISCGKTHMAIIKSDGTLWTWGY 436
Query: 372 NSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSL 417
N YGQ N Y P ++ + + K++ GG H + + +L
Sbjct: 437 NIYGQLGNGNVDYITEPVTIN-GISNISKISCGGKHVLAIDENKTL 481
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 162/409 (39%), Gaps = 98/409 (23%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
I+CG H A + SDGTL+TWG N +GQLG+G + P + + + + ISCG
Sbjct: 415 ISCGKTHMAIIKSDGTLWTWGYNIYGQLGNGNVDYITEPVTINGISN--ISKISCGGKHV 472
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQ--------------GSN------------------ 154
AI E + LW WG N GSN
Sbjct: 473 LAIDENK---------TLWAWGNNDYLQLIDDVGLSAESGSNDYCIPFAVKSEKDVKDIV 523
Query: 155 --FPRLF--------WGAFTPNTI------------------ICQVSCGSVHVVALSECG 186
F R W NT+ + VS G H++AL + G
Sbjct: 524 AAFNRTLVVYEDEEVWIYAAKNTVAGDEQSVYLPYKIEGLEGVTDVSVGKNHILALKDDG 583
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ + G + +GQLG G L +A L I V+ G HS A+ +
Sbjct: 584 YVYSAGNSYWGQLGDGSQTHHNSYSETFN-----LTKAKGLTNIVAVAAGSEHSVALKND 638
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
G V+TWG G+L H + L P + L+ I ++ G ++ AL G ++A
Sbjct: 639 GTVWTWGSNQFGELAHG---NDTFSLEPMQAEGLENICA--ISAGNNYNLALKEDGTVWA 693
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDG 364
WG + GQLG G TY N+P+ V + N V+++A G + +DG
Sbjct: 694 WGDNTYGQLGNGS-------------TYKTNVPVQVDGLENIVKIIA-GRDSSFAITKDG 739
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLAD 413
+ WG N+ GQ + + P +D G + + +G + VL +
Sbjct: 740 DVWAWGKNNCGQLGDGTTQNRLTPVKIDAFKG-CKSIVSGMDFTMVLMN 787
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 117/251 (46%), Gaps = 31/251 (12%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
QV+CG H +AL + G + WGYN YGQLG G E + P+ I+G LE
Sbjct: 111 FVQVACGEYHTIALKKDGTVWTWGYNSYGQLGLGEAGEIERIPKKIEG----------LE 160
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
+ +V+ G HS A+ ++G V+ WG GQLG +S + P +V L G +KD+
Sbjct: 161 DVIKVAAGSRHSLALKKDGTVWAWGYNYYGQLGD---ESNIRRNTPVQVKGLTG--VKDI 215
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV-PNGV 347
G S AL G ++ WG + GQ+G G S N+P+ V + +
Sbjct: 216 DAGDFFSVALRDDGTVWGWGYNYKGQIGCGTGINS-------------NVPLQTVGVSNI 262
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAAN-EKSTYAWYPSPVDWCVGEVRKLAAGGG 406
++ G H L +D + GWG GQ N +++ P + EV+ + AG
Sbjct: 263 TQISAGDEHVLALDKDKNVWGWGAGDKGQLGNGTAASFLRIPEKLS-SFTEVKSVKAGTM 321
Query: 407 HSAVLADACSL 417
SA + + +L
Sbjct: 322 VSAAIKEDGTL 332
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 111/436 (25%), Positives = 169/436 (38%), Gaps = 105/436 (24%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I + ++ WGYN GQ G + P + G S I+CG +H A
Sbjct: 425 IKSDGTLWTWGYNIYGQLGNGNVDYITE-----PVTINGI-----SNISKISCGGKHVLA 474
Query: 77 VASDGTLFTWGANEFGQ----LGDGTEEGR---------KHPEKVKQLQSEF-------- 115
+ + TL+ WG N++ Q +G E G K + VK + + F
Sbjct: 475 IDENKTLWAWGNNDYLQLIDDVGLSAESGSNDYCIPFAVKSEKDVKDIVAAFNRTLVVYE 534
Query: 116 -------------------------------VKSISCGAHCTAAIAEPRENDGTISTSRL 144
V +S G + A+ ++DG + ++
Sbjct: 535 DEEVWIYAAKNTVAGDEQSVYLPYKIEGLEGVTDVSVGKNHILAL----KDDGYVYSAGN 590
Query: 145 WVWGQ------NQGSNFPRLFWGAFTPN---TIICQVSCGSVHVVALSECGLLQAWGYNE 195
WGQ +++ F T T I V+ GS H VAL G + WG N+
Sbjct: 591 SYWGQLGDGSQTHHNSYSETF--NLTKAKGLTNIVAVAAGSEHSVALKNDGTVWTWGSNQ 648
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
+G+L G L+ P +A LE I +S G ++ A+ E+G V+ WG
Sbjct: 649 FGELAHGNDTFSLE-PM----------QAEGLENICAISAGNNYNLALKEDGTVWAWGDN 697
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
+ GQLG+ S K +P +V L+ I + G S A+T G ++AWG + GQL
Sbjct: 698 TYGQLGNGSTY---KTNVPVQVDGLENIV--KIIAGRDSSFAITKDGDVWAWGKNNCGQL 752
Query: 316 GLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
G G T L P + D + G + + G T+V M DG + G G N G
Sbjct: 753 GDG--TTQNRLTPVKIDAF----------KGCKSIVSGMDFTMVLMNDGTVIGVGSNVSG 800
Query: 376 QAANEKSTYAWYPSPV 391
S ++ P V
Sbjct: 801 VMTLGFSDRSFIPIEV 816
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 84/160 (52%), Gaps = 20/160 (12%)
Query: 220 FLDEAPE--LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV 277
+ E P+ +E QV+CGEYH+ A+ ++G V+TWG S GQLG ++G+ E +P+++
Sbjct: 99 MITEFPKKSMEGFVQVACGEYHTIALKKDGTVWTWGYNSYGQLGLG--EAGEIERIPKKI 156
Query: 278 VALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRN 337
L+ + VA G HS AL G ++AWG + GQLG R RN
Sbjct: 157 EGLEDVI--KVAAGSRHSLALKKDGTVWAWGYNYYGQLGDESNIR-------------RN 201
Query: 338 IPILVV-PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
P+ V GV+ + G ++ DG + GWGYN GQ
Sbjct: 202 TPVQVKGLTGVKDIDAGDFFSVALRDDGTVWGWGYNYKGQ 241
>gi|432906474|ref|XP_004077549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Oryzias
latipes]
Length = 1059
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 122/420 (29%), Positives = 190/420 (45%), Gaps = 60/420 (14%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ C R D+ CG HTA + DGT++
Sbjct: 4 WGNASYGQLGLGGIDEEIVVEPRK-------CEFFHGKRVRDVGCGRRHTAFLLEDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRL 144
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + G + + L
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQIIVALSCGESHTLAL----NDKGQVFSWGL 110
Query: 145 WVWGQNQGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYNEYG 197
GQ +NF P I + QV+CG H +ALS+ G + +WG N YG
Sbjct: 111 GSDGQLGLNNFEECIR---VPRNIKSLSDVQVAQVACGYWHSLALSKGGHIFSWGQNRYG 167
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG G+T + + P+ ++ L P Q++ G HS A++ +G V+ WG
Sbjct: 168 QLGLGMTGQSISVPQHLQS----LQGIP----FAQIAAGGAHSFALTLSGAVFGWGRNKF 219
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG L + P + AL + ++CG H+ ALT +G ++ +G GQLG
Sbjct: 220 GQLG---LNDTNDRCFPALLKALRSQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQLGH 276
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ 376
+ P + N+ V +ACG HTL + G++ +G GQ
Sbjct: 277 NSTNHEVN--PRKVFELMGNV--------VTQIACGRQHTLAFTPSSGKMDSFGLGGNGQ 326
Query: 377 AANEKSTYAWYPSPVD--W---------CVGE---VRKLAAGGGHSAVLADACSLKELCE 422
+ P+PV W +GE V ++ AGG S + S +++ E
Sbjct: 327 LGTRSTCNRKSPAPVKGPWASSSASSDSDIGESCVVNRIYAGGDQSFAHYSSSSNEQMME 386
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 122/255 (47%), Gaps = 41/255 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG GQ G E +R+P+ + + ++ + +ACG+ H+ A++
Sbjct: 102 KGQVFSWGLGSDGQLGLNNFEECIRVPRNI-------KSLSDVQVAQVACGYWHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDG-TEEGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
G +F+WG N +GQLG G T + P+ ++ LQ F + + GAH A
Sbjct: 155 GGHIFSWGQNRYGQLGLGMTGQSISVPQHLQSLQGIPFAQIAAGGAHSFAL--------- 205
Query: 138 TISTSRLWVWGQNQ----GSN------FPRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
T+S + ++ WG+N+ G N FP L + I +SCG H AL++ G
Sbjct: 206 TLSGA-VFGWGRNKFGQLGLNDTNDRCFPALLKALRSQRVIY--ISCGEDHTAALTKEGG 262
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS-EN 246
+ +G YGQLG T + +V + +TQ++CG H+ A + +
Sbjct: 263 VFTFGAGGYGQLGHNSTNHEVNPRKVFELMGNV---------VTQIACGRQHTLAFTPSS 313
Query: 247 GEVYTWGLGSVGQLG 261
G++ ++GLG GQLG
Sbjct: 314 GKMDSFGLGGNGQLG 328
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 94/201 (46%), Gaps = 22/201 (10%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
I+ WG N GQ G + + +P+ L L G P + IA G H+ A+ G
Sbjct: 158 IFSWGQNRYGQLGLGMTGQSISVPQHLQ-SLQGIP------FAQIAAGGAHSFALTLSGA 210
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F WG N+FGQLG R P +K L+S+ V ISCG TAA+ + +G + T
Sbjct: 211 VFGWGRNKFGQLGLNDTNDRCFPALLKALRSQRVIYISCGEDHTAALTK----EGGVFTF 266
Query: 143 RLWVWGQ------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALS-ECGLLQAWGYNE 195
+GQ N N PR + ++ Q++CG H +A + G + ++G
Sbjct: 267 GAGGYGQLGHNSTNHEVN-PRKVFELM--GNVVTQIACGRQHTLAFTPSSGKMDSFGLGG 323
Query: 196 YGQLGRGITCEGLQGPRVIKG 216
GQLG TC + P +KG
Sbjct: 324 NGQLGTRSTCNR-KSPAPVKG 343
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 363
+ WG + GQLGLG + P + + +F V+ V CG HT + D
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVVEPRKCE-FFHG-------KRVRDVGCGRRHTAFLLED 52
Query: 364 GRIHGWGYNSYGQAANEKS 382
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|194864811|ref|XP_001971119.1| GG14780 [Drosophila erecta]
gi|190652902|gb|EDV50145.1| GG14780 [Drosophila erecta]
Length = 1058
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 112/393 (28%), Positives = 173/393 (44%), Gaps = 84/393 (21%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG GQ G G E Q+ P Q+P P A + +ACGH HT + ++G
Sbjct: 7 LYCWGSTSHGQLGLGGIEDEQILTPSQIP----WTPDTAVEQ---VACGHRHTLFLTANG 59
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
++ G+N+ QLG R P + +LQ
Sbjct: 60 KVYACGSNDHSQLGHDLPTKR--PLLIPELQ----------------------------- 88
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGR 201
+ +I Q+SCGS H +ALS+ G + +WG N+ GQLG
Sbjct: 89 ------------------------DYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQLGH 124
Query: 202 GITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG 261
E +Q P+V++ + + Q++CG HS A++ GE+Y+WG GQLG
Sbjct: 125 ATDKEIMQLPKVVRQLVS--------KTVVQIACGNNHSLALTSCGELYSWGSNIYGQLG 176
Query: 262 HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQT 321
S + P R+ L GI + +ACGG HS ++ GA++ WG + GQLGL +T
Sbjct: 177 VNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDET 236
Query: 322 -RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANE 380
R++ P + T R + GV+ VACG ++ +G + G +YGQ +
Sbjct: 237 NRAY---PTQLKT-LRTL-------GVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHG 285
Query: 381 KSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
S+ P V +G + ++A G H+ L
Sbjct: 286 FSSNEMLPRMVMELMGSTITQVACGNRHTLALV 318
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 142/313 (45%), Gaps = 44/313 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y G N Q G +P + P P + + I+CG H+ A
Sbjct: 55 LTANGKVYACGSNDHSQLGHD-------LPTKRP---LLIPELQDYVIIQISCGSRHSLA 104
Query: 77 VASDGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
++ G + +WG N+ GQLG T+ E + P+ V+QL S+ V I+CG + + A+
Sbjct: 105 LSDWGQVLSWGDNDCGQLGHATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLALT----- 159
Query: 136 DGTISTSRLWVWGQN----QGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSE 184
S L+ WG N G N P+ P + + ++CG H +S+
Sbjct: 160 ----SCGELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISK 215
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G + WG N GQLG + Y L L + V+CG+ S ++
Sbjct: 216 SGAVFGWGRNNCGQLGL--------NDETNRAYPTQLKTLRTL-GVRFVACGDEFSVFLT 266
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGA 303
G V+T G G+ GQLGH E+LPR V+ L G I VACG H+ AL S+G
Sbjct: 267 NEGGVFTCGAGAYGQLGH---GFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGR 323
Query: 304 LYAWGGSQAGQLG 316
+YA+G +GQLG
Sbjct: 324 VYAFGLGSSGQLG 336
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 122/269 (45%), Gaps = 42/269 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+ WG N GQ G + +++PK + + + IACG+ H+ A+ S G
Sbjct: 111 VLSWGDNDCGQLGHATDKEIMQLPKVVR-------QLVSKTVVQIACGNNHSLALTSCGE 163
Query: 83 LFTWGANEFGQLGDGTEEGRKH---PEKVKQLQSEFVKSISCGAHCTAAIAEP------- 132
L++WG+N +GQLG + + H P ++ L + +I+CG + + I++
Sbjct: 164 LYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWG 223
Query: 133 RENDGTISTSRLWVWGQNQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
R N G + G N +N +P T V+CG V L+ G +
Sbjct: 224 RNNCGQL--------GLNDETNRAYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGGVFT 273
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS-AAVSENGEV 249
G YGQLG G + + PR++ ITQV+CG H+ A V G V
Sbjct: 274 CGAGAYGQLGHGFSSNEML-PRMVMELMG--------STITQVACGNRHTLALVPSRGRV 324
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
Y +GLGS GQLG S +S +LP+ V+
Sbjct: 325 YAFGLGSSGQLGTRSTKS---LMLPQVVI 350
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 93/202 (46%), Gaps = 22/202 (10%)
Query: 23 IYVWGYNHSGQTGRKGRE--RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
+Y WG N GQ G + P +L L G P A IACG H+ ++
Sbjct: 164 LYSWGSNIYGQLGVNSPKDLTHCNYPLRLT-TLLGIPLAA------IACGGNHSFLISKS 216
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N GQLG E R +P ++K L++ V+ ++CG + + N+G +
Sbjct: 217 GAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLT----NEGGVF 272
Query: 141 TSRLWVWGQ-----NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC-GLLQAWGYN 194
T +GQ + PR+ + I QV+CG+ H +AL G + A+G
Sbjct: 273 TCGAGAYGQLGHGFSSNEMLPRMVMELM--GSTITQVACGNRHTLALVPSRGRVYAFGLG 330
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG T + L P+V+ G
Sbjct: 331 SSGQLGTRST-KSLMLPQVVIG 351
>gi|452822986|gb|EME30000.1| E3 ubiquitin-protein ligase HERC1 [Galdieria sulphuraria]
Length = 456
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 168/350 (48%), Gaps = 56/350 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ +GYN GQ G + + P ++ + +++ + +ACG H+AA+ +GT
Sbjct: 65 LHSFGYNQYGQLGNGTK---VDSPLDASRDI----SSLSNKLIAVACGRYHSAALDVNGT 117
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+FTWG + G+LG E+ R P ++ L I CG H TAAI + DG +
Sbjct: 118 VFTWGGGKNGRLGHNDEQTRTIPCRITHLPR--AHKIFCGYHITAAITD----DGLYT-- 169
Query: 143 RLWVWGQN----QGSNFPRLFWGAFTP--------NTIICQVSCGSVHVVALSECGLLQA 190
W WG++ QGS ++ P N I Q++CG H + +E G +
Sbjct: 170 --WGWGEHGQLGQGS-----LEDSYGPKKVIFDDANLAISQLACGDRHCLVRTESGDVYT 222
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG NE+GQLG G E P ++ A + +T V+ G+ HSAAV+ G ++
Sbjct: 223 WGSNEFGQLGIGRYNEIYSSPVLLTSLAGMM--------VTFVAAGDRHSAAVTNTGSLF 274
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
TWG G+ GQ GH D +P V +L G+FI V CG + AL+ +Y +G +
Sbjct: 275 TWGCGAEGQCGHGDYNDCD---MPFLVESLVGVFILKVFCGHNFTVALSKDNDIYVFGNN 331
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
GQLG G ++S P + F +IP G + CGH H ++
Sbjct: 332 SYGQLGDG--SKSSCCTPRK---LFFSIP------GTIDITCGHFHCTLW 370
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 135/469 (28%), Positives = 217/469 (46%), Gaps = 74/469 (15%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A SA+Y WG + + GR+G PEL N +ACG HT +
Sbjct: 8 ASSALYTWGRAKNYRLGRRGTR-----DDSCQPELI--KVFENCAIQQVACGGGHTLVLL 60
Query: 79 SDGTLFTWGANEFGQLGDGT--EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
DG L ++G N++GQLG+GT + + L ++ + +++CG + +AA+ + +
Sbjct: 61 EDGCLHSFGYNQYGQLGNGTKVDSPLDASRDISSLSNKLI-AVACGRYHSAAL----DVN 115
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVS---------CGSVHVVALSECGL 187
GT+ T W G+N RL TI C+++ CG A+++ GL
Sbjct: 116 GTVFT---WGGGKN-----GRLGHNDEQTRTIPCRITHLPRAHKIFCGYHITAAITDDGL 167
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
WG+ E+GQLG+G + E GP+ + D+A I+Q++CG+ H +E+G
Sbjct: 168 Y-TWGWGEHGQLGQG-SLEDSYGPKKV-----IFDDAN--LAISQLACGDRHCLVRTESG 218
Query: 248 EVYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
+VYTWG GQLG + + S P + +L G+ + VA G HS A+T+ G+L
Sbjct: 219 DVYTWGSNEFGQLGIGRYNEIYSS-----PVLLTSLAGMMVTFVAAGDRHSAAVTNTGSL 273
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYM 361
+ WG GQ G G N+ D +P LV V + V CGH+ T+
Sbjct: 274 FTWGCGAEGQCGHGDY--------NDCD-----MPFLVESLVGVFILKVFCGHNFTVALS 320
Query: 362 RDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSLKELC 421
+D I+ +G NSYGQ + + P + + + + G H C+L
Sbjct: 321 KDNDIYVFGNNSYGQLGDGSKSSCCTPRKLFFSIPGTIDITCGHFH-------CTLWTTL 373
Query: 422 EFRLAES-VTLSNASEIEDVASRTGSEALARLCERLREH--SLHGDEFD 467
E + E+ V + + +E D + + S ++ RL+E SL+G D
Sbjct: 374 EEQNEENHVEIRSRTESVDSCTTSSSTGISDEERRLKERISSLNGKLTD 422
>gi|32451488|ref|NP_080377.2| probable E3 ubiquitin-protein ligase HERC4 isoform 2 [Mus musculus]
gi|29144941|gb|AAH43082.1| Hect domain and RLD 4 [Mus musculus]
gi|74188723|dbj|BAE28095.1| unnamed protein product [Mus musculus]
gi|148700106|gb|EDL32053.1| hect domain and RLD 4, isoform CRA_c [Mus musculus]
Length = 1049
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 159/341 (46%), Gaps = 62/341 (18%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRR--SDFF-----VNKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + +++CG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLQGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKG--------------------------------------------YA 218
I C+ P++IK Y
Sbjct: 173 IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV 232
Query: 219 KFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
L ++ +KI + CGE H+AA+++ G V+T+G G GQLGH S E+ PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH---NSTSHEINPRKVF 289
Query: 279 ALDGIFIKDVACGGVHSCALT-SKGALYAWGGSQAGQLGLG 318
L G + VACG H+ A S G +Y++G GQLG G
Sbjct: 290 ELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG +GQLG G EE P + ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I V+CG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVACGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGIDCQKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFV 310
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G +G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLQGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG G + + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQV+CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQVACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + Q + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GIDCQKQTSPQLIKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYN 194
T +GQ N S+ PR + +I+ QV+CG H A + G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQVACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|310817521|ref|YP_003949879.1| regulator of chromosome condensation, rcc1 [Stigmatella aurantiaca
DW4/3-1]
gi|309390593|gb|ADO68052.1| Regulator of chromosome condensation, RCC1 [Stigmatella aurantiaca
DW4/3-1]
Length = 860
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 126/396 (31%), Positives = 171/396 (43%), Gaps = 58/396 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WGYN S Q G G P Q+ EL G A + G H + SDGT
Sbjct: 382 VWAWGYNLSRQFG-DGMPATRTTPVQVS-ELTGGTA--------LVAGDLHAVVLKSDGT 431
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG N GQLG+G R P +V L + + +++ G + A+ +DG I
Sbjct: 432 VWAWGDNSSGQLGEGVTPVRAKPMQVSGLAA--ITALATGDGHSVAVG----SDGGI--- 482
Query: 143 RLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
W WG N+ G R T I ++ G H +AL G + WG N Y
Sbjct: 483 --WAWGDNRRGQLGIGITATREIPVQATGLASISALAAGDSHSLALRGNGSVWTWGSNAY 540
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG G + +V P L IT ++ G +HS A+ +G V+ WG
Sbjct: 541 GQLGDGTAIDRATAAQV-----------PGLTDITALAAGNHHSLALRNDGTVWVWGSND 589
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
GQLG ++ S P +V L + + V G HS A+ G ++ WG + GQLG
Sbjct: 590 FGQLGDGTVTS---RKTPVQVSGLSAM--RAVEAGPAHSVAVHLNGTVWVWGNNDFGQLG 644
Query: 317 LGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
G T R +P+ V GV VA G H+L DG + WGYN+ G
Sbjct: 645 DGTVTS-------------RAMPVQVSGLTGVTAVAVGVYHSLALRNDGTLWAWGYNNVG 691
Query: 376 QAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
Q N S P+ V G V LAAG GHS L
Sbjct: 692 QLGNGTSGIQSTPAQVPGLTG-VIALAAGNGHSLAL 726
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 171/381 (44%), Gaps = 65/381 (17%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+++ WG N GQ G G Q+P L A +A G+ H+ A+ +DG
Sbjct: 531 SVWTWGSNAYGQLG-DGTAIDRATAAQVP-GLTDITA--------LAAGNHHSLALRNDG 580
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
T++ WG+N+FGQLGDGT RK P +V L + ++++ G + A+ +GT+
Sbjct: 581 TVWVWGSNDFGQLGDGTVTSRKTPVQVSGLSA--MRAVEAGPAHSVAV----HLNGTV-- 632
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVS---------CGSVHVVALSECGLLQAWG 192
WVWG N +F +L G T + QVS G H +AL G L AWG
Sbjct: 633 ---WVWGNN---DFGQLGDGTVTSRAMPVQVSGLTGVTAVAVGVYHSLALRNDGTLWAWG 686
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
YN GQLG G + G + P L + ++ G HS A+ +G V+ W
Sbjct: 687 YNNVGQLGNGTS-----------GIQSTPAQVPGLTGVIALAAGNGHSLALRTDGTVWGW 735
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G S GQLG + P +V L + + G ++ AL S+ +++ WG A
Sbjct: 736 GANSFGQLGDGTTT---PRSTPTQVPGLTNVIALN--AGAFYTVALRSERSVWEWGSKSA 790
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWGY 371
GQLG G T+ + P+ V V +A G++H L D + WG
Sbjct: 791 GQLGDGTVTQ-------------KTTPVQVSGLTDVTALAAGNAHALALRTDRTVWAWGG 837
Query: 372 NSYGQAANEKSTYAWYPSPVD 392
N GQ + ++ P+PV+
Sbjct: 838 NQRGQIGDGTASI--MPAPVN 856
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 120/399 (30%), Positives = 183/399 (45%), Gaps = 64/399 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
I+ WG N GQ G + +++P + G + + +A G H+ A+ +G+
Sbjct: 482 IWAWGDNRRGQLGIG-----ITATREIPVQATGLASISA-----LAAGDSHSLALRGNGS 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++TWG+N +GQLGDGT R +V L + +++ G H + A+ NDGT+
Sbjct: 532 VWTWGSNAYGQLGDGTAIDRATAAQVPGLTD--ITALAAGNHHSLAL----RNDGTV--- 582
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVS---------CGSVHVVALSECGLLQAWGY 193
WVWG N +F +L G T QVS G H VA+ G + WG
Sbjct: 583 --WVWGSN---DFGQLGDGTVTSRKTPVQVSGLSAMRAVEAGPAHSVAVHLNGTVWVWGN 637
Query: 194 NEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
N++GQLG G +T + P + G L +T V+ G YHS A+ +G ++ W
Sbjct: 638 NDFGQLGDGTVTSRAM--PVQVSG----------LTGVTAVAVGVYHSLALRNDGTLWAW 685
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G +VGQLG+ + SG + P +V L G+ +A G HS AL + G ++ WG +
Sbjct: 686 GYNNVGQLGNGT--SGIQS-TPAQVPGLTGVIA--LAAGNGHSLALRTDGTVWGWGANSF 740
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYN 372
GQLG G T P + T + ++ N G +T+ + + WG
Sbjct: 741 GQLGDGTTT------PRSTPTQVPGLTNVIALN------AGAFYTVALRSERSVWEWGSK 788
Query: 373 SYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
S GQ + T P V + +V LAAG H+ L
Sbjct: 789 SAGQLGDGTVTQKTTPVQVS-GLTDVTALAAGNAHALAL 826
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 133/452 (29%), Positives = 190/452 (42%), Gaps = 103/452 (22%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N SGQ G G P Q+P G S + +A H+ A+ SDGT
Sbjct: 165 VWAWGFNGSGQLG-NGTATDRATPVQVP--------GLTSV-MAVAASEAHSLALRSDGT 214
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH-CTAAIAE---PRENDGT 138
++ WG N +GQLGDGT+ R P +V L V +++ G + T AI+ +DGT
Sbjct: 215 VWAWGDNGYGQLGDGTKAQRTTPVQVLGLAG--VTALAAGGNGTTVAISAHSLALRSDGT 272
Query: 139 ISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
+ W WG N G+ R T + ++ G+ H +AL + G + AWG
Sbjct: 273 V-----WAWGDNSAGQLGDGTTTERATPVQVLGLTSVTALAAGAFHSLALRDDGTVWAWG 327
Query: 193 YNEYGQLGRGITCE-------------------------GLQGPRVIK----------GY 217
N GQLG G T G++G + GY
Sbjct: 328 NNSSGQLGDGTTTARPTPVQVPGLTSVIAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGY 387
Query: 218 A---KFLDEAP----------ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCS 264
+F D P EL T + G+ H+ + +G V+ WG S GQLG
Sbjct: 388 NLSRQFGDGMPATRTTPVQVSELTGGTALVAGDLHAVVLKSDGTVWAWGDNSSGQLGEGV 447
Query: 265 LQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSF 324
K P +V L I +A G HS A+ S G ++AWG ++ GQLG+G
Sbjct: 448 TPVRAK---PMQVSGL--AAITALATGDGHSVAVGSDGGIWAWGDNRRGQLGIGI----- 497
Query: 325 SLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ----AAN 379
T R IP+ + +A G SH+L +G + WG N+YGQ A
Sbjct: 498 --------TATREIPVQATGLASISALAAGDSHSLALRGNGSVWTWGSNAYGQLGDGTAI 549
Query: 380 EKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
+++T A P D + LAAG HS L
Sbjct: 550 DRATAAQVPGLTD-----ITALAAGNHHSLAL 576
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 161/381 (42%), Gaps = 73/381 (19%)
Query: 56 CPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
CPA A ++ +HT A+ DGT++ WG N GQLG+GT R P +V L S
Sbjct: 144 CPAPA------VSAAGDHTLALRRDGTVWAWGFNGSGQLGNGTATDRATPVQVPGLTSVM 197
Query: 116 VKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQV--- 172
+ S AH A +DGT+ W WG N + +L G T QV
Sbjct: 198 AVAASE-AHSLA-----LRSDGTV-----WAWGDN---GYGQLGDGTKAQRTTPVQVLGL 243
Query: 173 ------SCG--------SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYA 218
+ G S H +AL G + AWG N GQLG G T E +V+
Sbjct: 244 AGVTALAAGGNGTTVAISAHSLALRSDGTVWAWGDNSAGQLGDGTTTERATPVQVLG--- 300
Query: 219 KFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
L +T ++ G +HS A+ ++G V+ WG S GQLG + + P +V
Sbjct: 301 --------LTSVTALAAGAFHSLALRDDGTVWAWGNNSSGQLGDGTTTA---RPTPVQVP 349
Query: 279 ALDGIFIKDVACG-------GVHSCALTSKGALYAWGGSQAGQLGLG-PQTRSFSLIPNE 330
L + G G HS AL S G ++AWG + + Q G G P TR+ + +E
Sbjct: 350 GLTSVIAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNLSRQFGDGMPATRTTPVQVSE 409
Query: 331 SDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSP 390
+ G LVA G H +V DG + WG NS GQ + P
Sbjct: 410 ------------LTGGTALVA-GDLHAVVLKSDGTVWAWGDNSSGQLGEGVTPVRAKPMQ 456
Query: 391 VDWCVGEVRKLAAGGGHSAVL 411
V + + LA G GHS +
Sbjct: 457 VS-GLAAITALATGDGHSVAV 476
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 57/130 (43%), Gaps = 13/130 (10%)
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
V+ G H+ AL G ++AWG + +GQLG G T + + +P L V
Sbjct: 149 VSAAGDHTLALRRDGTVWAWGFNGSGQLGNGTATDRATPV---------QVPGL---TSV 196
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH 407
VA +H+L DG + WG N YGQ + P V G V LAAGG
Sbjct: 197 MAVAASEAHSLALRSDGTVWAWGDNGYGQLGDGTKAQRTTPVQVLGLAG-VTALAAGGNG 255
Query: 408 SAVLADACSL 417
+ V A SL
Sbjct: 256 TTVAISAHSL 265
>gi|74226109|dbj|BAE25272.1| unnamed protein product [Mus musculus]
Length = 1057
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 112/369 (30%), Positives = 173/369 (46%), Gaps = 41/369 (11%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRR--SDFF-----VNKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + +++CG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLQGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
I C+ P++IK QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 IDCQKQTSPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V VACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA 385
+N KS +
Sbjct: 332 TSNRKSPFT 340
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG +GQLG G EE P + ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I V+CG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVACGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGIDCQKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFV 310
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G +G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLQGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG G + + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQV+CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQVACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + Q + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GIDCQKQTSPQLIKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYN 194
T +GQ N S+ PR + +I+ QV+CG H A + G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQVACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|442319170|ref|YP_007359191.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441486812|gb|AGC43507.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 1095
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 118/380 (31%), Positives = 168/380 (44%), Gaps = 58/380 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + ++ WG N GQ G + Q R+P + L+ A + G H+ A
Sbjct: 63 VRSDGTVWAWGDNAYGQLGNGSLQDQ-RVPVR-AWGLWNISA--------VGAGDLHSLA 112
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ SDGT++TWG N FGQLGDGT GR+ P +V L E V+ + +H A + D
Sbjct: 113 MKSDGTVWTWGGNNFGQLGDGTTTGRQAPVQVPGL-GEVVRVAAGFSHSLA-----LKTD 166
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
GT+ W WG N G+ RL I ++ G+ H +AL G + A
Sbjct: 167 GTV-----WAWGSNGAGRLGDGTTTQRLMPVQVQGLPTIKAIAAGNAHSLALDGTGRVWA 221
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG N GQLG GY P L T +S G HS +G +
Sbjct: 222 WGSNSNGQLG-----------DTTAGYRMLPALVPGLTNATGLSAGSNHSLVRQADGTTW 270
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
WG + GQLG + S P++V L G + V +HS L S G ++ WG +
Sbjct: 271 VWGANTYGQLGDGTTTS---RSAPQQVSGLAG--VDGVLGAELHSLVLKSDGTVWTWGSN 325
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGH-SHTLVYMRDGRIHG 368
Q GQLG G Q + R +P+ V+ +GV VA G H++ M +G +
Sbjct: 326 QRGQLGDGTQEQ-------------RLVPVQVMGLSGVVAVAAGSGQHSVAVMANGEVWT 372
Query: 369 WGYNSYGQAANEKSTYAWYP 388
WG+N GQ S+Y+ P
Sbjct: 373 WGHNVEGQLGEGSSSYSAVP 392
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 128/402 (31%), Positives = 180/402 (44%), Gaps = 59/402 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++ WG N +GQ G G P Q+P L G + IA G H A
Sbjct: 464 LKADGTVWAWGDNANGQLG-NGSTTDRSNPTQVP-GLTGV--------VSIAAGPGHALA 513
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V +DGTL+TWG N GQLGDGT R P +V + V S++ G + + + + D
Sbjct: 514 VKADGTLWTWGDNNTGQLGDGTTVDRPIPTQVPGVTG--VVSVAAGLYHSLVV----KVD 567
Query: 137 GTISTSRLWVWGQNQ------GSNFPRLFWGAFTPN-TIICQVSCGSVHVVALSECGLLQ 189
GT+ W WG N G+ R + TPN T + ++ G H +AL G +
Sbjct: 568 GTV-----WAWGSNYEGQLGGGTTTIRPV-PSQTPNLTGVVAITAGLYHSLALKTDGTVW 621
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
AWGYN +GQLG G T Q P + G++ + + G YHS A+ +G V
Sbjct: 622 AWGYNLHGQLGNGNTTT-QQVPTQVPGFSGGVS----------LGAGIYHSLAIKTDGSV 670
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
+TWG GQLG + S +V G+ +A G HS AL + G +AWG
Sbjct: 671 WTWGYNYRGQLGDGTTTSRTTP---TQVAGFTGVSF--LAAGEFHSVALRTDGTAWAWGS 725
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGW 369
+ GQLG G ++ P L G + +A G T DG + W
Sbjct: 726 NDKGQLGDGSARWHYA-------------PTLSRLVGARGLAAGDRFTAARKSDGTVWAW 772
Query: 370 GYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
G N+YGQ + + P+ V + +V LAAG GH V+
Sbjct: 773 GDNTYGQLGDGTTLATRSPAQVS-GLTDVEGLAAGEGHVVVV 813
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 131/444 (29%), Positives = 189/444 (42%), Gaps = 82/444 (18%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + ++ WG N+ GQ G G + P Q+P + +A G H+ A
Sbjct: 113 MKSDGTVWTWGGNNFGQLG-DGTTTGRQAPVQVP---------GLGEVVRVAAGFSHSLA 162
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ +DGT++ WG+N G+LGDGT R P +V+ L + +K+I+ G + A+ D
Sbjct: 163 LKTDGTVWAWGSNGAGRLGDGTTTQRLMPVQVQGLPT--IKAIAAGNAHSLAL------D 214
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWG-----AFTPN-TIICQVSCGSVHVVALSECGLLQA 190
GT R+W WG N G A P T +S GS H + G
Sbjct: 215 GT---GRVWAWGSNSNGQLGDTTAGYRMLPALVPGLTNATGLSAGSNHSLVRQADGTTWV 271
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG N YGQLG G T P+ + G L + V E HS + +G V+
Sbjct: 272 WGANTYGQLGDGTTTS-RSAPQQVSG----------LAGVDGVLGAELHSLVLKSDGTVW 320
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
TWG GQLG + + + L+P +V+ L G+ + A G HS A+ + G ++ WG +
Sbjct: 321 TWGSNQRGQLGDGTQE---QRLVPVQVMGLSGV-VAVAAGSGQHSVAVMANGEVWTWGHN 376
Query: 311 QAGQLGLGPQT------RSFSLIPNESDTYFRNIPILVVPNGV----------QL----- 349
GQLG G + RS +L+ S R + P+G QL
Sbjct: 377 VEGQLGEGSSSYSAVPKRSHALVERTSVAAGRYHGLASKPDGTVWAWGDNAKGQLGDGTT 436
Query: 350 -----------------VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVD 392
VA GH +L DG + WG N+ GQ N +T P+ V
Sbjct: 437 AQRLLPTQVPGLTNMVAVAAGHHSSLALKADGTVWAWGDNANGQLGNGSTTDRSNPTQVP 496
Query: 393 WCVGEVRKLAAGGGHS-AVLADAC 415
G V +AAG GH+ AV AD
Sbjct: 497 GLTGVV-SIAAGPGHALAVKADGT 519
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 179/408 (43%), Gaps = 62/408 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I +++ WGYN+ GQ G G P Q+ G +A G H+ A
Sbjct: 664 IKTDGSVWTWGYNYRGQLG-DGTTTSRTTPTQVA-GFTGVSF--------LAAGEFHSVA 713
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ +DGT + WG+N+ GQLGDG+ P + + + + ++ G TAA R++D
Sbjct: 714 LRTDGTAWAWGSNDKGQLGDGSARWHYAPTLSRLVGA---RGLAAGDRFTAA----RKSD 766
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
GT+ W WG N G+ + T + ++ G HVV + G +
Sbjct: 767 GTV-----WAWGDNTYGQLGDGTTLATRSPAQVSGLTDVEGLAAGEGHVVVVKMDGTVWT 821
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG N GQLG G T R++ + P L + V+ G HS A+ +G V+
Sbjct: 822 WGNNAKGQLGDGTTTR-----RLVP------TQVPGLTGVVAVAAGYAHSLALKADGTVW 870
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
WG GQLG + + + P + L + +A G H A + G L+AWG +
Sbjct: 871 GWGENIYGQLGDGTTT---QRVAPTQAQGL--TVVLSMASGTYHGLARKADGTLWAWGYN 925
Query: 311 QAGQLGLGPQTRSF--SLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHG 368
GQLG+G T +L+P+ S GV ++ H H+L DG +
Sbjct: 926 AHGQLGIGTTTTRLAPTLVPSLS--------------GVVSLSATHQHSLALKPDGTVWA 971
Query: 369 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLADAC 415
WGYNS GQ + +T P+ + V+ ++AG +S AV AD
Sbjct: 972 WGYNSNGQLGDGTTTTRHVPTQAP-SLSSVKAVSAGFEYSLAVKADGT 1018
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 113/374 (30%), Positives = 161/374 (43%), Gaps = 56/374 (14%)
Query: 24 YVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTL 83
+ WG N GQ G G R P L G +A G TAA SDGT+
Sbjct: 721 WAWGSNDKGQLG-DGSARWHYAPTL--SRLVGARG--------LAAGDRFTAARKSDGTV 769
Query: 84 FTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSR 143
+ WG N +GQLGDGT + P +V L V+ ++ G + + DGT+
Sbjct: 770 WAWGDNTYGQLGDGTTLATRSPAQVSGLTD--VEGLAAGEGHVVVV----KMDGTV---- 819
Query: 144 LWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
W WG N G+ RL T + V+ G H +AL G + WG N YG
Sbjct: 820 -WTWGNNAKGQLGDGTTTRRLVPTQVPGLTGVVAVAAGYAHSLALKADGTVWGWGENIYG 878
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG G T + RV +A L + ++ G YH A +G ++ WG +
Sbjct: 879 QLGDGTTTQ-----RVAP------TQAQGLTVVLSMASGTYHGLARKADGTLWAWGYNAH 927
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG + + L P V +L G+ ++ HS AL G ++AWG + GQLG
Sbjct: 928 GQLG---IGTTTTRLAPTLVPSLSGVV--SLSATHQHSLALKPDGTVWAWGYNSNGQLGD 982
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
G T +P ++ P L + V+ V+ G ++L DG + WG N GQ
Sbjct: 983 GTTTTRH--VPTQA-------PSL---SSVKAVSAGFEYSLAVKADGTVWSWGINDRGQL 1030
Query: 378 ANEKSTYAWYPSPV 391
+ +T P+ V
Sbjct: 1031 GSGTATPRATPTQV 1044
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 123/403 (30%), Positives = 173/403 (42%), Gaps = 60/403 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++ WG+N GQ G +G +PK+ + A +A G H A
Sbjct: 364 VMANGEVWTWGHNVEGQLG-EGSSSYSAVPKR---------SHALVERTSVAAGRYHGLA 413
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
DGT++ WG N GQLGDGT R P +V L + + +++ G H + A+ + D
Sbjct: 414 SKPDGTVWAWGDNAKGQLGDGTTAQRLLPTQVPGLTN--MVAVAAGHHSSLAL----KAD 467
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
GT+ W WG N GS R T + ++ G H +A+ G L
Sbjct: 468 GTV-----WAWGDNANGQLGNGSTTDRSNPTQVPGLTGVVSIAAGPGHALAVKADGTLWT 522
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG N GQLG G T + R I + P + + V+ G YHS V +G V+
Sbjct: 523 WGDNNTGQLGDGTTVD-----RPIP------TQVPGVTGVVSVAAGLYHSLVVKVDGTVW 571
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
WG GQLG + +P + L G+ + G HS AL + G ++AWG +
Sbjct: 572 AWGSNYEGQLGGGTTT---IRPVPSQTPNLTGVVA--ITAGLYHSLALKTDGTVWAWGYN 626
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGRIHG 368
GQLG G +T + +P V GV L G H+L DG +
Sbjct: 627 LHGQLGNG-------------NTTTQQVPTQVPGFSGGVSL-GAGIYHSLAIKTDGSVWT 672
Query: 369 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
WGYN GQ + +T P+ V G V LAAG HS L
Sbjct: 673 WGYNYRGQLGDGTTTSRTTPTQVAGFTG-VSFLAAGEFHSVAL 714
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 168/378 (44%), Gaps = 66/378 (17%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLR-IPKQLPPELFGCPAGANSRWLDIACGHEHTA 75
+ ++ WG N+ GQ G G +R +P Q P L G A I G H+
Sbjct: 564 VKVDGTVWAWGSNYEGQLG--GGTTTIRPVPSQTP-NLTGVVA--------ITAGLYHSL 612
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
A+ +DGT++ WG N GQLG+G ++ P +V F +S GA ++A +
Sbjct: 613 ALKTDGTVWAWGYNLHGQLGNGNTTTQQVPTQVP----GFSGGVSLGAGIYHSLAI--KT 666
Query: 136 DGTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQ 189
DG++ W WG N G+ R T + ++ G H VAL G
Sbjct: 667 DGSV-----WTWGYNYRGQLGDGTTTSRTTPTQVAGFTGVSFLAAGEFHSVALRTDGTAW 721
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ---VSCGEYHSAAVSEN 246
AWG N+ GQLG G A++ AP L ++ ++ G+ +AA +
Sbjct: 722 AWGSNDKGQLG--------------DGSARW-HYAPTLSRLVGARGLAAGDRFTAARKSD 766
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF-IKDVACGGVHSCALTSKGALY 305
G V+ WG + GQLG + L R + G+ ++ +A G H + G ++
Sbjct: 767 GTVWAWGDNTYGQLGDGT------TLATRSPAQVSGLTDVEGLAAGEGHVVVVKMDGTVW 820
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
WG + GQLG G TR L+P + +P L GV VA G++H+L DG
Sbjct: 821 TWGNNAKGQLGDGTTTRR--LVPTQ-------VPGLT---GVVAVAAGYAHSLALKADGT 868
Query: 366 IHGWGYNSYGQAANEKST 383
+ GWG N YGQ + +T
Sbjct: 869 VWGWGENIYGQLGDGTTT 886
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 99/320 (30%), Positives = 146/320 (45%), Gaps = 45/320 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ ++ WG N GQ G R+L +P Q+P L G A +A G+ H+ A
Sbjct: 813 VKMDGTVWTWGNNAKGQLGDGTTTRRL-VPTQVP-GLTGVVA--------VAAGYAHSLA 862
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ +DGT++ WG N +GQLGDGT R P + + L V S++ G + A R+ D
Sbjct: 863 LKADGTVWGWGENIYGQLGDGTTTQRVAPTQAQGL--TVVLSMASGTYHGLA----RKAD 916
Query: 137 GTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
GT LW WG N G+ RL + + +S H +AL G + A
Sbjct: 917 GT-----LWAWGYNAHGQLGIGTTTTRLAPTLVPSLSGVVSLSATHQHSLALKPDGTVWA 971
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WGYN GQLG G T +AP L + VS G +S AV +G V+
Sbjct: 972 WGYNSNGQLGDGTTTT-----------RHVPTQAPSLSSVKAVSAGFEYSLAVKADGTVW 1020
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
+WG+ GQLG + P +V L+ + + A H+ +++ G + +G +
Sbjct: 1021 SWGINDRGQLGSGTAT---PRATPTQVAGLNSVTLLLAAR--AHALVVSADGTMRGFGDN 1075
Query: 311 QAGQLGLGPQTRSFSLIPNE 330
+AGQLG G L PN+
Sbjct: 1076 EAGQLGAGDTL--IRLAPNQ 1093
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 113/363 (31%), Positives = 163/363 (44%), Gaps = 61/363 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLP--PELFGCPAGANSRWLDIACGHEHTAAVASD 80
++ WG N GQ G G R P Q+ ++ G +A G H V D
Sbjct: 769 VWAWGDNTYGQLG-DGTTLATRSPAQVSGLTDVEG-----------LAAGEGHVVVVKMD 816
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGTI 139
GT++TWG N GQLGDGT R P +V L V +++ G AH A A DGT+
Sbjct: 817 GTVWTWGNNAKGQLGDGTTTRRLVPTQVPGLTG--VVAVAAGYAHSLALKA-----DGTV 869
Query: 140 STSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
W WG+N G+ R+ T++ ++ G+ H +A G L AWGY
Sbjct: 870 -----WGWGENIYGQLGDGTTTQRVAPTQAQGLTVVLSMASGTYHGLARKADGTLWAWGY 924
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
N +GQLG G T L P ++ P L + +S HS A+ +G V+ WG
Sbjct: 925 NAHGQLGIGTTTTRLA-PTLV----------PSLSGVVSLSATHQHSLALKPDGTVWAWG 973
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
S GQLG + + +P + +L +K V+ G +S A+ + G +++WG + G
Sbjct: 974 YNSNGQLGDGTTTT---RHVPTQAPSLS--SVKAVSAGFEYSLAVKADGTVWSWGINDRG 1028
Query: 314 QLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNS 373
QLG G T P + T + N V L+ +H LV DG + G+G N
Sbjct: 1029 QLGSGTAT------PRATPTQVAGL------NSVTLLLAARAHALVVSADGTMRGFGDNE 1076
Query: 374 YGQ 376
GQ
Sbjct: 1077 AGQ 1079
>gi|344275071|ref|XP_003409337.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Loxodonta africana]
Length = 1057
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 107/339 (31%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK A +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLADI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGLDCKKQAS-----PKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 112/376 (29%), Positives = 175/376 (46%), Gaps = 45/376 (11%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLLGSEECIRVPRNIKS--LADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
+ C+ P+++K QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 LDCKKQASPKLLKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYP 388
+N KS + W P
Sbjct: 332 TSNRKSPFTVKGNWLP 347
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 125/256 (48%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + A+ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNI-------KSLADIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG G + + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 94/202 (46%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G ++ PK L L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGLGLDCKKQASPKLLK-SLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|312433980|ref|NP_084390.1| probable E3 ubiquitin-protein ligase HERC4 isoform 1 [Mus musculus]
gi|126215720|sp|Q6PAV2.2|HERC4_MOUSE RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
Length = 1057
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 112/369 (30%), Positives = 173/369 (46%), Gaps = 41/369 (11%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRR--SDFF-----VNKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + +++CG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLQGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
I C+ P++IK QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 IDCQKQTSPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V VACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA 385
+N KS +
Sbjct: 332 TSNRKSPFT 340
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG +GQLG G EE P + ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I V+CG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVACGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGIDCQKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFV 310
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G +G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLQGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG G + + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQV+CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQVACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + Q + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GIDCQKQTSPQLIKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYN 194
T +GQ N S+ PR + +I+ QV+CG H A + G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQVACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|115373190|ref|ZP_01460491.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|115369791|gb|EAU68725.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 859
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 126/396 (31%), Positives = 171/396 (43%), Gaps = 58/396 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WGYN S Q G G P Q+ EL G A + G H + SDGT
Sbjct: 381 VWAWGYNLSRQFG-DGMPATRTTPVQVS-ELTGGTA--------LVAGDLHAVVLKSDGT 430
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG N GQLG+G R P +V L + + +++ G + A+ +DG I
Sbjct: 431 VWAWGDNSSGQLGEGVTPVRAKPMQVSGLAA--ITALATGDGHSVAVG----SDGGI--- 481
Query: 143 RLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
W WG N+ G R T I ++ G H +AL G + WG N Y
Sbjct: 482 --WAWGDNRRGQLGIGITATREIPVQATGLASISALAAGDSHSLALRGNGSVWTWGSNAY 539
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG G + +V P L IT ++ G +HS A+ +G V+ WG
Sbjct: 540 GQLGDGTAIDRATAAQV-----------PGLTDITALAAGNHHSLALRNDGTVWVWGSND 588
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
GQLG ++ S P +V L + + V G HS A+ G ++ WG + GQLG
Sbjct: 589 FGQLGDGTVTS---RKTPVQVSGLSAM--RAVEAGPAHSVAVHLNGTVWVWGNNDFGQLG 643
Query: 317 LGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
G T R +P+ V GV VA G H+L DG + WGYN+ G
Sbjct: 644 DGTVTS-------------RAMPVQVSGLTGVTAVAVGVYHSLALRNDGTLWAWGYNNVG 690
Query: 376 QAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
Q N S P+ V G V LAAG GHS L
Sbjct: 691 QLGNGTSGIQSTPAQVPGLTG-VIALAAGNGHSLAL 725
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 171/381 (44%), Gaps = 65/381 (17%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+++ WG N GQ G G Q+P L A +A G+ H+ A+ +DG
Sbjct: 530 SVWTWGSNAYGQLG-DGTAIDRATAAQVP-GLTDITA--------LAAGNHHSLALRNDG 579
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
T++ WG+N+FGQLGDGT RK P +V L + ++++ G + A+ +GT+
Sbjct: 580 TVWVWGSNDFGQLGDGTVTSRKTPVQVSGLSA--MRAVEAGPAHSVAV----HLNGTV-- 631
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVS---------CGSVHVVALSECGLLQAWG 192
WVWG N +F +L G T + QVS G H +AL G L AWG
Sbjct: 632 ---WVWGNN---DFGQLGDGTVTSRAMPVQVSGLTGVTAVAVGVYHSLALRNDGTLWAWG 685
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
YN GQLG G + G + P L + ++ G HS A+ +G V+ W
Sbjct: 686 YNNVGQLGNGTS-----------GIQSTPAQVPGLTGVIALAAGNGHSLALRTDGTVWGW 734
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G S GQLG + P +V L + + G ++ AL S+ +++ WG A
Sbjct: 735 GANSFGQLGDGTTT---PRSTPTQVPGLTNVIALN--AGAFYTVALRSERSVWEWGSKSA 789
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWGY 371
GQLG G T+ + P+ V V +A G++H L D + WG
Sbjct: 790 GQLGDGTVTQ-------------KTTPVQVSGLTDVTALAAGNAHALALRTDRTVWAWGG 836
Query: 372 NSYGQAANEKSTYAWYPSPVD 392
N GQ + ++ P+PV+
Sbjct: 837 NQRGQIGDGTASI--MPAPVN 855
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 120/399 (30%), Positives = 183/399 (45%), Gaps = 64/399 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
I+ WG N GQ G + +++P + G + + +A G H+ A+ +G+
Sbjct: 481 IWAWGDNRRGQLGIG-----ITATREIPVQATGLASISA-----LAAGDSHSLALRGNGS 530
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++TWG+N +GQLGDGT R +V L + +++ G H + A+ NDGT+
Sbjct: 531 VWTWGSNAYGQLGDGTAIDRATAAQVPGLTD--ITALAAGNHHSLAL----RNDGTV--- 581
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVS---------CGSVHVVALSECGLLQAWGY 193
WVWG N +F +L G T QVS G H VA+ G + WG
Sbjct: 582 --WVWGSN---DFGQLGDGTVTSRKTPVQVSGLSAMRAVEAGPAHSVAVHLNGTVWVWGN 636
Query: 194 NEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
N++GQLG G +T + P + G L +T V+ G YHS A+ +G ++ W
Sbjct: 637 NDFGQLGDGTVTSRAM--PVQVSG----------LTGVTAVAVGVYHSLALRNDGTLWAW 684
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G +VGQLG+ + SG + P +V L G+ +A G HS AL + G ++ WG +
Sbjct: 685 GYNNVGQLGNGT--SGIQS-TPAQVPGLTGVIA--LAAGNGHSLALRTDGTVWGWGANSF 739
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYN 372
GQLG G T P + T + ++ N G +T+ + + WG
Sbjct: 740 GQLGDGTTT------PRSTPTQVPGLTNVIALN------AGAFYTVALRSERSVWEWGSK 787
Query: 373 SYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
S GQ + T P V + +V LAAG H+ L
Sbjct: 788 SAGQLGDGTVTQKTTPVQVS-GLTDVTALAAGNAHALAL 825
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 133/452 (29%), Positives = 190/452 (42%), Gaps = 103/452 (22%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N SGQ G G P Q+P G S + +A H+ A+ SDGT
Sbjct: 164 VWAWGFNGSGQLG-NGTATDRATPVQVP--------GLTSV-MAVAASEAHSLALRSDGT 213
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH-CTAAIAE---PRENDGT 138
++ WG N +GQLGDGT+ R P +V L V +++ G + T AI+ +DGT
Sbjct: 214 VWAWGDNGYGQLGDGTKAQRTTPVQVLGLAG--VTALAAGGNGTTVAISAHSLALRSDGT 271
Query: 139 ISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
+ W WG N G+ R T + ++ G+ H +AL + G + AWG
Sbjct: 272 V-----WAWGDNSAGQLGDGTTTERATPVQVLGLTSVTALAAGAFHSLALRDDGTVWAWG 326
Query: 193 YNEYGQLGRGITCE-------------------------GLQGPRVIK----------GY 217
N GQLG G T G++G + GY
Sbjct: 327 NNSSGQLGDGTTTARPTPVQVPGLTSVIAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGY 386
Query: 218 A---KFLDEAP----------ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCS 264
+F D P EL T + G+ H+ + +G V+ WG S GQLG
Sbjct: 387 NLSRQFGDGMPATRTTPVQVSELTGGTALVAGDLHAVVLKSDGTVWAWGDNSSGQLGEGV 446
Query: 265 LQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSF 324
K P +V L I +A G HS A+ S G ++AWG ++ GQLG+G
Sbjct: 447 TPVRAK---PMQVSGL--AAITALATGDGHSVAVGSDGGIWAWGDNRRGQLGIGI----- 496
Query: 325 SLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ----AAN 379
T R IP+ + +A G SH+L +G + WG N+YGQ A
Sbjct: 497 --------TATREIPVQATGLASISALAAGDSHSLALRGNGSVWTWGSNAYGQLGDGTAI 548
Query: 380 EKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
+++T A P D + LAAG HS L
Sbjct: 549 DRATAAQVPGLTD-----ITALAAGNHHSLAL 575
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 161/381 (42%), Gaps = 73/381 (19%)
Query: 56 CPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
CPA A ++ +HT A+ DGT++ WG N GQLG+GT R P +V L S
Sbjct: 143 CPAPA------VSAAGDHTLALRRDGTVWAWGFNGSGQLGNGTATDRATPVQVPGLTSVM 196
Query: 116 VKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQV--- 172
+ S AH A +DGT+ W WG N + +L G T QV
Sbjct: 197 AVAASE-AHSLA-----LRSDGTV-----WAWGDN---GYGQLGDGTKAQRTTPVQVLGL 242
Query: 173 ------SCG--------SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYA 218
+ G S H +AL G + AWG N GQLG G T E +V+
Sbjct: 243 AGVTALAAGGNGTTVAISAHSLALRSDGTVWAWGDNSAGQLGDGTTTERATPVQVLG--- 299
Query: 219 KFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
L +T ++ G +HS A+ ++G V+ WG S GQLG + + P +V
Sbjct: 300 --------LTSVTALAAGAFHSLALRDDGTVWAWGNNSSGQLGDGTTTA---RPTPVQVP 348
Query: 279 ALDGIFIKDVACG-------GVHSCALTSKGALYAWGGSQAGQLGLG-PQTRSFSLIPNE 330
L + G G HS AL S G ++AWG + + Q G G P TR+ + +E
Sbjct: 349 GLTSVIAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNLSRQFGDGMPATRTTPVQVSE 408
Query: 331 SDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSP 390
+ G LVA G H +V DG + WG NS GQ + P
Sbjct: 409 ------------LTGGTALVA-GDLHAVVLKSDGTVWAWGDNSSGQLGEGVTPVRAKPMQ 455
Query: 391 VDWCVGEVRKLAAGGGHSAVL 411
V + + LA G GHS +
Sbjct: 456 VS-GLAAITALATGDGHSVAV 475
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 57/130 (43%), Gaps = 13/130 (10%)
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
V+ G H+ AL G ++AWG + +GQLG G T + + +P L V
Sbjct: 148 VSAAGDHTLALRRDGTVWAWGFNGSGQLGNGTATDRATPV---------QVPGL---TSV 195
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH 407
VA +H+L DG + WG N YGQ + P V G V LAAGG
Sbjct: 196 MAVAASEAHSLALRSDGTVWAWGDNGYGQLGDGTKAQRTTPVQVLGLAG-VTALAAGGNG 254
Query: 408 SAVLADACSL 417
+ V A SL
Sbjct: 255 TTVAISAHSL 264
>gi|148700108|gb|EDL32055.1| hect domain and RLD 4, isoform CRA_e [Mus musculus]
Length = 928
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 161/341 (47%), Gaps = 62/341 (18%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRR--SDFF-----VNKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + +++CG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLQGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIK-----------------------------GYAKF------------- 220
I C+ P++IK G KF
Sbjct: 173 IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV 232
Query: 221 --LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
L ++ +KI + CGE H+AA+++ G V+T+G G GQLGH S E+ PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH---NSTSHEINPRKVF 289
Query: 279 ALDGIFIKDVACGGVHSCALT-SKGALYAWGGSQAGQLGLG 318
L G + VACG H+ A S G +Y++G GQLG G
Sbjct: 290 ELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG +GQLG G EE P + ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I V+CG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVACGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGIDCQKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFV 310
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G +G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLQGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG G + + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQV+CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQVACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + Q + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GIDCQKQTSPQLIKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGYN 194
T +GQ N S+ PR + +I+ QV+CG H A G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQVACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGST-SNRKSPFTVKG 343
>gi|148700105|gb|EDL32052.1| hect domain and RLD 4, isoform CRA_b [Mus musculus]
Length = 1066
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 107/345 (31%), Positives = 161/345 (46%), Gaps = 62/345 (17%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
++ WG GQ G G + ++ + P++ + F N + D+ CG HT V D
Sbjct: 9 SMLCWGNASYGQLGLGGIDEEIVLEPRR--SDFF-----VNKKVRDVGCGLRHTVFVLDD 61
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GT 138
GT++T G N+ GQLG E+ RK PE+V L ++ + +++CG T A+ + + G
Sbjct: 62 GTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGL 119
Query: 139 ISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQ 198
S +L + G + PR + I QV+CG H +ALS+ + WG N+YGQ
Sbjct: 120 DSDGQLGLQGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQ 177
Query: 199 LGRGITCEGLQGPRVIKG------------------------------------------ 216
LG GI C+ P++IK
Sbjct: 178 LGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 237
Query: 217 --YAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLP 274
Y L ++ +KI + CGE H+AA+++ G V+T+G G GQLGH S E+ P
Sbjct: 238 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH---NSTSHEINP 294
Query: 275 RRVVALDGIFIKDVACGGVHSCALT-SKGALYAWGGSQAGQLGLG 318
R+V L G + VACG H+ A S G +Y++G GQLG G
Sbjct: 295 RKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 339
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 158/340 (46%), Gaps = 38/340 (11%)
Query: 82 TLFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
++ WG +GQLG G EE P + ++ V+ + CG T + + DGT+
Sbjct: 9 SMLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLD----DGTV 64
Query: 140 ST---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
T + L G + P N I V+CG H +AL++ G + AWG +
Sbjct: 65 YTCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVACGEAHTLALNDKGQVYAWGLDSD 122
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 123 GQLGLQGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNK 174
Query: 257 VGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ G
Sbjct: 175 YGQLGLGIDCQKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 229
Query: 314 QLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNS 373
QLGL +E+D Y N+ + + + CG HT ++G + +G
Sbjct: 230 QLGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 279
Query: 374 YGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
YGQ + +++ P V +G V ++A G H++
Sbjct: 280 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFV 319
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G +G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 111 KGQVYAWGLDSDGQLGLQGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 163
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG G + + + P+ +K L F++ + GAH
Sbjct: 164 ASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVL--------- 214
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 215 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 270
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQV+CG H++A V
Sbjct: 271 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQVACGRQHTSAFVPS 321
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 322 SGRIYSFGLGGNGQLG 337
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + Q + QL L G P ++ +A G H+ +
Sbjct: 165 SEVFCWGQNKYGQLGL-GIDCQKQTSPQLIKSLLGIP------FMQVAAGGAHSFVLTLS 217
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 218 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 273
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYN 194
T +GQ N S+ PR + +I+ QV+CG H A + G + ++G
Sbjct: 274 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQVACGRQHTSAFVPSSGRIYSFGLG 331
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 332 GNGQLGTGST-SNRKSPFTVKG 352
>gi|386813626|ref|ZP_10100850.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386403123|dbj|GAB63731.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 407
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 163/373 (43%), Gaps = 69/373 (18%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + + WG N GQ G G +IP Q+ +L A IA G H+ A
Sbjct: 73 LKSDGTVLTWGQNMHGQLG-DGTNTDRKIPVQVK-DLNNVTA--------IAGGAWHSVA 122
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ SDGT++TWG+N GQLGDGT + R P +V L+ S G H A ++D
Sbjct: 123 LTSDGTVWTWGSNWAGQLGDGTTKSRNKPVQVNNLK-NITAIASKGLHNLAL-----KSD 176
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTP------NTIICQVSCGSVHVVALSE 184
GT+ W WG+N G+ R TP NTII ++ G H +A
Sbjct: 177 GTV-----WTWGRNIYGQLGDGTTTDR-----NTPVQTRSLNTIIS-IAGGGYHSLAQKA 225
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G + WG N+YGQLG G T P ++ G ++ ++ + CG HS +
Sbjct: 226 DGTIWTWGLNQYGQLGDG-TITNRTIPVLVNG----------IKDVSMIRCGGDHSIVLK 274
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
NG ++ WG GQLG +S D P + L I D GG HS L S G +
Sbjct: 275 NNGTIWIWGFNQHGQLGD---RSTDNRSTPVPMGDLKNIMTID--GGGDHSLILKSDGTV 329
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQLVACGHSHTLVYMRD 363
+ WG ++ GQLG G T R PI + V +A G H++ D
Sbjct: 330 WTWGNNENGQLGDGT-------------TMSRATPIQASTLSNVTAIASGEQHSIALKSD 376
Query: 364 GRIHGWGYNSYGQ 376
G I WG N GQ
Sbjct: 377 GTIWAWGSNRNGQ 389
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 114/360 (31%), Positives = 162/360 (45%), Gaps = 60/360 (16%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
L ++ G H+ A+ SDGT+ TWG N GQLGDGT RK P +VK L + V +I+ GA
Sbjct: 61 LQVSGGSFHSIALKSDGTVLTWGQNMHGQLGDGTNTDRKIPVQVKDLNN--VTAIAGGAW 118
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVH 178
+ A+ DGT+ W WG N G+ R I ++ +H
Sbjct: 119 HSVALTS----DGTV-----WTWGSNWAGQLGDGTTKSRNKPVQVNNLKNITAIASKGLH 169
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
+AL G + WG N YGQLG G T + + L I ++ G Y
Sbjct: 170 NLALKSDGTVWTWGRNIYGQLGDGTTTD-----------RNTPVQTRSLNTIISIAGGGY 218
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA---CGGVHS 295
HS A +G ++TWGL GQLG ++ + +P V ++G IKDV+ CGG HS
Sbjct: 219 HSLAQKADGTIWTWGLNQYGQLGDGTITN---RTIP---VLVNG--IKDVSMIRCGGDHS 270
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG----VQLVA 351
L + G ++ WG +Q GQLG + T R+ P VP G + +
Sbjct: 271 IVLKNNGTIWIWGFNQHGQLG-------------DRSTDNRSTP---VPMGDLKNIMTID 314
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
G H+L+ DG + WG N GQ + + P + V +A+G HS L
Sbjct: 315 GGGDHSLILKSDGTVWTWGNNENGQLGDGTTMSRATPIQAS-TLSNVTAIASGEQHSIAL 373
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 141/312 (45%), Gaps = 51/312 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + ++ WG N +GQ G G + P Q+ L A IA H A
Sbjct: 123 LTSDGTVWTWGSNWAGQLG-DGTTKSRNKPVQVN-NLKNITA--------IASKGLHNLA 172
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ SDGT++TWG N +GQLGDGT R P + + L + + SI+ G + + A ++ D
Sbjct: 173 LKSDGTVWTWGRNIYGQLGDGTTTDRNTPVQTRSLNT--IISIAGGGYHSLA----QKAD 226
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI---------ICQVSCGSVHVVALSECGL 187
GTI W WG NQ + +L G T TI + + CG H + L G
Sbjct: 227 GTI-----WTWGLNQ---YGQLGDGTITNRTIPVLVNGIKDVSMIRCGGDHSIVLKNNGT 278
Query: 188 LQAWGYNEYGQLG-RGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ WG+N++GQLG R P +L+ I + G HS + +
Sbjct: 279 IWIWGFNQHGQLGDRSTDNRSTPVP------------MGDLKNIMTIDGGGDHSLILKSD 326
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
G V+TWG GQLG + S P + L + +A G HS AL S G ++A
Sbjct: 327 GTVWTWGNNENGQLGDGTTMS---RATPIQASTLSNV--TAIASGEQHSIALKSDGTIWA 381
Query: 307 WGGSQAGQLGLG 318
WG ++ GQLG G
Sbjct: 382 WGSNRNGQLGDG 393
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 140/313 (44%), Gaps = 62/313 (19%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I QVS GS H +AL G + WG N +GQLG G + K + +L
Sbjct: 60 ILQVSGGSFHSIALKSDGTVLTWGQNMHGQLGDGTNTD-----------RKIPVQVKDLN 108
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
+T ++ G +HS A++ +G V+TWG GQLG + +S +K P +V L I +
Sbjct: 109 NVTAIAGGAWHSVALTSDGTVWTWGSNWAGQLGDGTTKSRNK---PVQVNNLKN--ITAI 163
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGP--------QTRSFSLIPN----------- 329
A G+H+ AL S G ++ WG + GQLG G QTRS + I +
Sbjct: 164 ASKGLHNLALKSDGTVWTWGRNIYGQLGDGTTTDRNTPVQTRSLNTIISIAGGGYHSLAQ 223
Query: 330 ------------------ESDTYFRNIPILVVPNGVQ---LVACGHSHTLVYMRDGRIHG 368
+ R IP+LV NG++ ++ CG H++V +G I
Sbjct: 224 KADGTIWTWGLNQYGQLGDGTITNRTIPVLV--NGIKDVSMIRCGGDHSIVLKNNGTIWI 281
Query: 369 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSLKELCEF---RL 425
WG+N +GQ + + P P+ + + + GG HS +L ++ +L
Sbjct: 282 WGFNQHGQLGDRSTDNRSTPVPMG-DLKNIMTIDGGGDHSLILKSDGTVWTWGNNENGQL 340
Query: 426 AESVTLSNASEIE 438
+ T+S A+ I+
Sbjct: 341 GDGTTMSRATPIQ 353
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 125/282 (44%), Gaps = 40/282 (14%)
Query: 2 DINEIIGETARPVDNIPAKS--AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
++ I ++ + N+ KS ++ WG N GQ G G P Q
Sbjct: 156 NLKNITAIASKGLHNLALKSDGTVWTWGRNIYGQLG-DGTTTDRNTPVQTRSL------- 207
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
+ + IA G H+ A +DGT++TWG N++GQLGDGT R P V ++ V I
Sbjct: 208 --NTIISIAGGGYHSLAQKADGTIWTWGLNQYGQLGDGTITNRTIPVLVNGIKD--VSMI 263
Query: 120 SCGAHCTAAIAEPRENDGTISTSRLWVWGQNQ-GSNFPRLFWGAFTPNTI-----ICQVS 173
CG + + +N+GTI W+WG NQ G R TP + I +
Sbjct: 264 RCGGDHSIVL----KNNGTI-----WIWGFNQHGQLGDRSTDNRSTPVPMGDLKNIMTID 314
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
G H + L G + WG NE GQLG G T A + +A L +T +
Sbjct: 315 GGGDHSLILKSDGTVWTWGNNENGQLGDGTTMS----------RATPI-QASTLSNVTAI 363
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPR 275
+ GE HS A+ +G ++ WG GQLG S+ + +L +
Sbjct: 364 ASGEQHSIALKSDGTIWAWGSNRNGQLGDGSISNRSTPVLVK 405
>gi|344275073|ref|XP_003409338.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Loxodonta africana]
Length = 1049
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 107/339 (31%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK A +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLLGSEECIRVPRNIKSLADI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGLDCKKQAS-----PKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 112/376 (29%), Positives = 175/376 (46%), Gaps = 45/376 (11%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLLGSEECIRVPRNIKS--LADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
+ C+ P+++K QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 LDCKKQASPKLLKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYP 388
+N KS + W P
Sbjct: 332 TSNRKSPFTVKGNWLP 347
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 125/256 (48%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + A+ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRNI-------KSLADIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG G + + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 94/202 (46%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G ++ PK L L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGLGLDCKKQASPKLLK-SLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|294881725|ref|XP_002769466.1| regulator of chromosome condensation, putative [Perkinsus marinus
ATCC 50983]
gi|239872925|gb|EER02184.1| regulator of chromosome condensation, putative [Perkinsus marinus
ATCC 50983]
Length = 576
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 122/447 (27%), Positives = 190/447 (42%), Gaps = 89/447 (19%)
Query: 17 IPAKSAIYVWGYNH-SGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTA 75
+ A S ++ WG +G +G E L + A R +A G H
Sbjct: 166 VTADSRVFAWGRMPWTGAQTSQGLEDVLSL--------------ARKRIRSVAIGAGHAL 211
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
A+ G + +WG N+ GQLG G E R PE VK ++ I+CG + A+ +
Sbjct: 212 ALTEGGKVMSWGLNDSGQLGTGDERSRIIPETVKLPSDVYIDKIACGPDYSVAVTK---- 267
Query: 136 DGTISTSRLWVWGQNQGSNFPRLFWGAF--------------TPNTIICQVSCGSVHVVA 181
+LW WG+ Q SN+PRLF + + I +VSCG H++A
Sbjct: 268 -----AGQLWTWGRYQASNWPRLFVDTWCNGNKPGCDNTAVGLAGSRILKVSCGDQHMLA 322
Query: 182 LSECGLLQAWGYNEYGQLG---RGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
L++ G + +WGYN++GQLG G+ G Q P + P L KI+ ++ G
Sbjct: 323 LTKEGEVFSWGYNDFGQLGWGLHGVDVVGQQRPHKV----------PHLPKISDIAAGGG 372
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
HS AV ++G VY+WG S GQ+GH Q + P RV +K V G V + +
Sbjct: 373 HSVAVGDDGAVYSWGSNSQGQIGHGLRQDFAE---PTRVQMPQP--VKSVTAGKVTTLLV 427
Query: 299 --TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIP----------------- 339
+ ++ WG QA + ++ + N P
Sbjct: 428 CDDADNSVIMWGAVQAAGPEMEAPVKAAEGMQNGHKEDKTEAPAVAASSVMAKLGGGGSA 487
Query: 340 -ILVVPNG-VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPS-------- 389
+L+ G V ++ G +H V ++D ++G+GYNS QA S ++ P
Sbjct: 488 SVLIPGQGEVTTMSIGEAHGAV-VKDAALYGFGYNSENQAIATPSKSSFVPPTLVDLTEM 546
Query: 390 ---PVDWCVGEVRKLAAGGGHSAVLAD 413
P D+ ++ LA GG S +A+
Sbjct: 547 HKGPDDFKFNKISDLACGGSMSLAVAN 573
>gi|336116892|ref|YP_004571659.1| hypothetical protein MLP_12420 [Microlunatus phosphovorus NM-1]
gi|334684671|dbj|BAK34256.1| hypothetical protein MLP_12420 [Microlunatus phosphovorus NM-1]
Length = 508
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 123/406 (30%), Positives = 186/406 (45%), Gaps = 70/406 (17%)
Query: 24 YVWGYNHSGQTGRKGRERQLRIPKQLP-PELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+VWG N G+ G +R+ P +P + G A W +A + +DG+
Sbjct: 148 WVWGQNDHGELGDGTNKRRF-APSPMPYLDQVGVSAIDGGGWFSLA--------LLNDGS 198
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+++WG N++ QLGDGT+E R P V L VK+I+ G + A+ + DGT+
Sbjct: 199 VWSWGRNDWAQLGDGTKETRHAPVDVMHLARFGVKAIAAGGWTSLALLK----DGTV--- 251
Query: 143 RLWVWGQNQGSNFPRLFWG--AFTPNTI---------ICQVSCGSVHVVALSECGLLQAW 191
W WG N ++ +L G F +TI + V G H +AL E G + +W
Sbjct: 252 --WSWGAN---DWRQLGAGDTGFNAHTIPVKVEGLSGVTAVDIGGWHSLALREDGTVWSW 306
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G+ GQLG G + V P L + VS G HS A+ +G V++
Sbjct: 307 GHGHQGQLGDGTNSDHNAAAVV-----------PGLSGVKAVSAGYRHSLALLRDGTVWS 355
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVH-------SCALTSKGAL 304
WG + GQLG + + + P +V +L G +K +A + S AL G +
Sbjct: 356 WGYNAQGQLGDGTNTNRNT---PVKVASLGG-RVKAIAASSSNVFHDPSFSLALLEDGTV 411
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRD 363
++WG + QLG G T RN P+ V +GV+ +A G H+L ++D
Sbjct: 412 WSWGTNDWHQLGDGTNTS-------------RNTPVKVSDLSGVKAIAPGGRHSLALLKD 458
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDW-CVGEVRKLAAGGGHS 408
G + GWG N +GQ T Y +PV + V+ +AAGG HS
Sbjct: 459 GTVWGWGANDHGQVGTGDGTPDRYAAPVKIEGISHVKAIAAGGWHS 504
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 155/356 (43%), Gaps = 67/356 (18%)
Query: 84 FTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSR 143
+ WG N+ G+LGDGT + R P + L V +I G + A+ NDG++
Sbjct: 148 WVWGQNDHGELGDGTNKRRFAPSPMPYLDQVGVSAIDGGGWFSLALL----NDGSV---- 199
Query: 144 LWVWGQNQGSNFPRLFWGAFTPNTI-------------ICQVSCGSVHVVALSECGLLQA 190
W WG+N + G T T + ++ G +AL + G + +
Sbjct: 200 -WSWGRNDWAQL-----GDGTKETRHAPVDVMHLARFGVKAIAAGGWTSLALLKDGTVWS 253
Query: 191 WGYNEYGQLGRGITCEGLQG-PRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
WG N++ QLG G T P ++G L +T V G +HS A+ E+G V
Sbjct: 254 WGANDWRQLGAGDTGFNAHTIPVKVEG----------LSGVTAVDIGGWHSLALREDGTV 303
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
++WG G GQLG + + + V L G+ K V+ G HS AL G +++WG
Sbjct: 304 WSWGHGHQGQLGDGTNSDHNAAAV---VPGLSGV--KAVSAGYRHSLALLRDGTVWSWGY 358
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG--VQLVACGHSH-------TLVY 360
+ GQLG G T RN P+ V G V+ +A S+ +L
Sbjct: 359 NAQGQLGDGTNTN-------------RNTPVKVASLGGRVKAIAASSSNVFHDPSFSLAL 405
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLADAC 415
+ DG + WG N + Q + +T P V G V+ +A GG HS A+L D
Sbjct: 406 LEDGTVWSWGTNDWHQLGDGTNTSRNTPVKVSDLSG-VKAIAPGGRHSLALLKDGT 460
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 102/232 (43%), Gaps = 40/232 (17%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+ H GQ G + P L G A ++ G+ H+ A+ DGT
Sbjct: 303 VWSWGHGHQGQLGDGTNSDH--NAAAVVPGLSGVKA--------VSAGYRHSLALLRDGT 352
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+++WG N GQLGDGT R P KV L VK+I+ A + +P + +
Sbjct: 353 VWSWGYNAQGQLGDGTNTNRNTPVKVASLGGR-VKAIA--ASSSNVFHDPSFSLALLEDG 409
Query: 143 RLWVWGQN------QGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECGLLQAW 191
+W WG N G+N R TP + + ++ G H +AL + G + W
Sbjct: 410 TVWSWGTNDWHQLGDGTNTSR-----NTPVKVSDLSGVKAIAPGGRHSLALLKDGTVWGW 464
Query: 192 GYNEYGQLGRGI-TCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
G N++GQ+G G T + P I+G + + ++ G +HS A
Sbjct: 465 GANDHGQVGTGDGTPDRYAAPVKIEG----------ISHVKAIAAGGWHSIA 506
>gi|195622006|gb|ACG32833.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
Length = 353
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 158/322 (49%), Gaps = 44/322 (13%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++ G H+ A+ + L +WG E GQLG G E R P + + + S+ CGA T
Sbjct: 18 VSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVICGADHT 77
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCG 175
A +E W WG +F RL G FTP + I Q++CG
Sbjct: 78 TAYSEDELQ------VYSWGWG-----DFGRLGHGNSSDVFTPQPVKALQGLKIKQIACG 126
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
H +A++ G +Q+WG N+ GQLG G T + L P+ I+ + + ++
Sbjct: 127 DSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLL-PQKIQAFESVC--------VKMIAA 177
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
G H+AAV+E+G++Y WG G G LG L + LLP +V +++G + VACG H+
Sbjct: 178 GAEHTAAVTEDGDLYGWGWGRYGNLG---LGDRNDRLLPEKVSSVEGEKMVLVACGWRHT 234
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS 355
++ G LY +G S+ GQLG G L+P++ + + + ++ G
Sbjct: 235 ITVSDSGNLYTYGWSKYGQLGHG--DFEDHLVPHKVEALKDST--------ISQISGGWR 284
Query: 356 HTLVYMRDGRIHGWGYNSYGQA 377
HT+ +G+++GWG+N +GQ
Sbjct: 285 HTMALTSEGKLYGWGWNKFGQV 306
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/303 (32%), Positives = 144/303 (47%), Gaps = 40/303 (13%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG-TLF 84
WG GQ G E +L +P L G A A + + CG +HT A + D ++
Sbjct: 37 WGRGEDGQLGHGDAEDRL-----VPTVLSGFDAPAITS---VICGADHTTAYSEDELQVY 88
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGTISTSR 143
+WG +FG+LG G P+ VK LQ +K I+CG +HC A
Sbjct: 89 SWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDSHCLAVTM----------AGE 138
Query: 144 LWVWGQNQ------GSNFPRLFWGAFTPNTIIC--QVSCGSVHVVALSECGLLQAWGYNE 195
+ WG+NQ G+ L +C ++ G+ H A++E G L WG+
Sbjct: 139 VQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGR 198
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
YG LG G + L +V + E EK+ V+CG H+ VS++G +YT+G
Sbjct: 199 YGNLGLGDRNDRLLPEKV---------SSVEGEKMVLVACGWRHTITVSDSGNLYTYGWS 249
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
GQLGH + L+P +V AL I ++ G H+ ALTS+G LY WG ++ GQ+
Sbjct: 250 KYGQLGHGDFE---DHLVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQV 306
Query: 316 GLG 318
G+G
Sbjct: 307 GVG 309
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 128/256 (50%), Gaps = 24/256 (9%)
Query: 164 TPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDE 223
+P + VS G+ H VAL +L +WG E GQLG G + L P V+ G+ +
Sbjct: 10 SPPQTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLV-PTVLSGF-----D 63
Query: 224 APELEKITQVSCGEYHSAAVSENG-EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG 282
AP IT V CG H+ A SE+ +VY+WG G G+LGH + P+ V AL G
Sbjct: 64 AP---AITSVICGADHTTAYSEDELQVYSWGWGDFGRLGH---GNSSDVFTPQPVKALQG 117
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
+ IK +ACG H A+T G + +WG +Q GQLGLG T SL+P + F ++
Sbjct: 118 LKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLG--TTEDSLLPQKIQA-FESVC--- 171
Query: 343 VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLA 402
V+++A G HT DG ++GWG+ YG P V GE L
Sbjct: 172 ----VKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLV 227
Query: 403 A-GGGHSAVLADACSL 417
A G H+ ++D+ +L
Sbjct: 228 ACGWRHTITVSDSGNL 243
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 117/250 (46%), Gaps = 40/250 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG+ G+ G G + P+ + A + IACG H AV G
Sbjct: 87 VYSWGWGDFGRLGH-GNSSDVFTPQPVK-------ALQGLKIKQIACGDSHCLAVTMAGE 138
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ +WG N+ GQLG GT E P+K++ +S VK I+ GA TAA+ E DG +
Sbjct: 139 VQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTE----DGDLYG- 193
Query: 143 RLWVWGQ----NQGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
W WG+ G RL P + + V+CG H + +S+ G L +
Sbjct: 194 --WGWGRYGNLGLGDRNDRLL-----PEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTY 246
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G+++YGQLG G + L +V EA + I+Q+S G H+ A++ G++Y
Sbjct: 247 GWSKYGQLGHGDFEDHLVPHKV---------EALKDSTISQISGGWRHTMALTSEGKLYG 297
Query: 252 WGLGSVGQLG 261
WG GQ+G
Sbjct: 298 WGWNKFGQVG 307
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y +G++ GQ G E L +P ++ A +S I+ G HT A+ S+G
Sbjct: 243 LYTYGWSKYGQLGHGDFEDHL-VPHKVE-------ALKDSTISQISGGWRHTMALTSEGK 294
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSE 114
L+ WG N+FGQ+G G + P +V SE
Sbjct: 295 LYGWGWNKFGQVGVGNNDDHSSPGQVSFPGSE 326
>gi|397599967|gb|EJK57568.1| hypothetical protein THAOC_22376, partial [Thalassiosira oceanica]
Length = 657
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 149/311 (47%), Gaps = 50/311 (16%)
Query: 23 IYVWGYNHSGQTGR--KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
+Y WG G+ G G + R+ L ++ + CG HTAAV+S
Sbjct: 28 VYTWGRGDDGRLGHGDNGWKYVPRLTHSLAGQVI----------THVTCGSYHTAAVSSK 77
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G LFTWG +G+LG G E G P++V L V I+CG+ TA I
Sbjct: 78 GNLFTWGGGMYGKLGHGNESGHSTPKRVDSLVGLAVVDIACGSRHTA-----------IV 126
Query: 141 TSR--LWVWG--QNQGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQ 189
TSR L+ WG +N + +TP + + Q+S H L++ G +
Sbjct: 127 TSRGCLYTWGDKENGVAGHGDTEGHQYTPKLLERLSGKRVVQLSACGFHTGCLTDAGEVY 186
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
WG ++G+LG G PR+++ L + P Q+SCG +HSA V+ +G++
Sbjct: 187 TWGEGKFGRLGHGAE-RNCHSPRLVE---TLLGKRP-----VQISCGGFHSAVVTADGKM 237
Query: 250 YTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
YT+G G GQLGH GDK ++ P V LDG+F+ + CG HS ALTS +Y W
Sbjct: 238 YTFGGGEHGQLGH-----GDKVNKVKPTLVKDLDGVFLTQITCGWSHSVALTSSHEVYTW 292
Query: 308 GGSQAGQLGLG 318
G G+LG G
Sbjct: 293 GNGDHGKLGHG 303
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 160/352 (45%), Gaps = 51/352 (14%)
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G ++TWG + G+LG G + P L + + ++CG++ TAA++ S
Sbjct: 26 GGVYTWGRGDDGRLGHGDNGWKYVPRLTHSLAGQVITHVTCGSYHTAAVS---------S 76
Query: 141 TSRLWVWGQNQGSNFPRLFW----GAFTPNTI-------ICQVSCGSVHVVALSECGLLQ 189
L+ WG G + +L G TP + + ++CGS H ++ G L
Sbjct: 77 KGNLFTWG---GGMYGKLGHGNESGHSTPKRVDSLVGLAVVDIACGSRHTAIVTSRGCLY 133
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
WG E G G G T EG Q Y L E +++ Q+S +H+ +++ GEV
Sbjct: 134 TWGDKENGVAGHGDT-EGHQ-------YTPKLLERLSGKRVVQLSACGFHTGCLTDAGEV 185
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
YTWG G G+LGH + ++ PR V L G ++CGG HS +T+ G +Y +GG
Sbjct: 186 YTWGEGKFGRLGHGAERNCHS---PRLVETLLGKRPVQISCGGFHSAVVTADGKMYTFGG 242
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDGRI 366
+ GQLG G + P LV +GV L + CG SH++ +
Sbjct: 243 GEHGQLGHGDKVNKVK-------------PTLVKDLDGVFLTQITCGWSHSVALTSSHEV 289
Query: 367 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADACSL 417
+ WG +G+ + P V+ VG+ V +A+ H+A L + S+
Sbjct: 290 YTWGNGDHGKLGHGCGKKVSTPQLVEKLVGQKVVCVASYNEHTACLVEPHSV 341
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 86/175 (49%), Gaps = 19/175 (10%)
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
+ G VYTWG G G+LGH GD + +PR +L G I V CG H+ A++SK
Sbjct: 23 THGGGVYTWGRGDDGRLGH-----GDNGWKYVPRLTHSLAGQVITHVTCGSYHTAAVSSK 77
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
G L+ WGG G+LG G + S P D+ +V V +ACG HT +
Sbjct: 78 GNLFTWGGGMYGKLGHGNE--SGHSTPKRVDS--------LVGLAVVDIACGSRHTAIVT 127
Query: 362 RDGRIHGWGYNSYGQAAN-EKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADA 414
G ++ WG G A + + + + P ++ G+ V +L+A G H+ L DA
Sbjct: 128 SRGCLYTWGDKENGVAGHGDTEGHQYTPKLLERLSGKRVVQLSACGFHTGCLTDA 182
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 80/195 (41%), Gaps = 14/195 (7%)
Query: 11 ARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACG 70
+R + ++ +Y WG +G G E Q P+L +G L ACG
Sbjct: 120 SRHTAIVTSRGCLYTWGDKENGVAGHGDTEGH-----QYTPKLLERLSGKRVVQLS-ACG 173
Query: 71 HEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIA 130
HT + G ++TWG +FG+LG G E P V+ L + ISCG +A +
Sbjct: 174 F-HTGCLTDAGEVYTWGEGKFGRLGHGAERNCHSPRLVETLLGKRPVQISCGGFHSAVVT 232
Query: 131 EPRENDGTIST---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
DG + T G N + + Q++CG H VAL+
Sbjct: 233 A----DGKMYTFGGGEHGQLGHGDKVNKVKPTLVKDLDGVFLTQITCGWSHSVALTSSHE 288
Query: 188 LQAWGYNEYGQLGRG 202
+ WG ++G+LG G
Sbjct: 289 VYTWGNGDHGKLGHG 303
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 8/116 (6%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y +G GQ G ++ ++ L +L G I CG H+ A
Sbjct: 231 VTADGKMYTFGGGEHGQLGHG--DKVNKVKPTLVKDLDGV------FLTQITCGWSHSVA 282
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
+ S ++TWG + G+LG G + P+ V++L + V ++ TA + EP
Sbjct: 283 LTSSHEVYTWGNGDHGKLGHGCGKKVSTPQLVEKLVGQKVVCVASYNEHTACLVEP 338
>gi|242073146|ref|XP_002446509.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
gi|241937692|gb|EES10837.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
Length = 443
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 99/321 (30%), Positives = 158/321 (49%), Gaps = 44/321 (13%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++ G H+ A+ + L +WG E GQLG G E R P + + + S+ CGA T
Sbjct: 19 VSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPGITSVICGADHT 78
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCG 175
A +E W WG +F RL G FTP + I Q++CG
Sbjct: 79 TAYSEDELQ------VYSWGWG-----DFGRLGHGNSSDVFTPQPVKALQGLKIKQIACG 127
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
H +A++ G +Q+WG N+ GQLG G T + L P+ I+ + + ++
Sbjct: 128 DSHCLAVTMAGQVQSWGRNQNGQLGLGTTEDSLL-PQKIQAFEGVC--------VKMIAA 178
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
G H+AAV+E+G++Y WG G G LG L + LLP +V +++G + VACG H+
Sbjct: 179 GAEHTAAVTEDGDLYGWGWGRYGNLG---LGDRNDRLLPEKVSSVEGEKMVLVACGWRHT 235
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS 355
++ G LY +G S+ GQLG G L+P++ + + + ++ G
Sbjct: 236 ITVSDSGNLYTYGWSKYGQLGHG--DFEDHLVPHKLEALKDST--------ISQISGGWR 285
Query: 356 HTLVYMRDGRIHGWGYNSYGQ 376
HT+ +G+++GWG+N +GQ
Sbjct: 286 HTMALTSEGKLYGWGWNKFGQ 306
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 163/364 (44%), Gaps = 50/364 (13%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG-TLF 84
WG GQ G E +L +P L G A + + CG +HT A + D ++
Sbjct: 38 WGRGEDGQLGHGDAEDRL-----VPTVLSGFDAPGITS---VICGADHTTAYSEDELQVY 89
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGTISTSR 143
+WG +FG+LG G P+ VK LQ +K I+CG +HC A +
Sbjct: 90 SWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDSHCLAVTM----------AGQ 139
Query: 144 LWVWGQNQ------GSNFPRLFWGAFTPNTIIC--QVSCGSVHVVALSECGLLQAWGYNE 195
+ WG+NQ G+ L +C ++ G+ H A++E G L WG+
Sbjct: 140 VQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGR 199
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
YG LG G + L +V + E EK+ V+CG H+ VS++G +YT+G
Sbjct: 200 YGNLGLGDRNDRLLPEKV---------SSVEGEKMVLVACGWRHTITVSDSGNLYTYGWS 250
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
GQLGH + L+P ++ AL I ++ G H+ ALTS+G LY WG ++ GQ+
Sbjct: 251 KYGQLGHGDFED---HLVPHKLEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQV 307
Query: 316 GLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
G+G S + +F + VACG HTL + WG + G
Sbjct: 308 GVGNNDDHCSPV----QVHFPE------DQKISQVACGWRHTLALSEKKNVFSWGRGTSG 357
Query: 376 QAAN 379
Q N
Sbjct: 358 QLGN 361
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 127/256 (49%), Gaps = 24/256 (9%)
Query: 164 TPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDE 223
+P + VS G+ H VAL +L +WG E GQLG G + L P V+ G+ +
Sbjct: 11 SPPQTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLV-PTVLSGF-----D 64
Query: 224 APELEKITQVSCGEYHSAAVSENG-EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG 282
AP IT V CG H+ A SE+ +VY+WG G G+LGH + P+ V AL G
Sbjct: 65 AP---GITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHG---NSSDVFTPQPVKALQG 118
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
+ IK +ACG H A+T G + +WG +Q GQLGLG T SL+P + F +
Sbjct: 119 LKIKQIACGDSHCLAVTMAGQVQSWGRNQNGQLGLG--TTEDSLLPQKIQA-FEGVC--- 172
Query: 343 VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLA 402
V+++A G HT DG ++GWG+ YG P V GE L
Sbjct: 173 ----VKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLV 228
Query: 403 A-GGGHSAVLADACSL 417
A G H+ ++D+ +L
Sbjct: 229 ACGWRHTITVSDSGNL 244
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 152/331 (45%), Gaps = 56/331 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG+ G+ G G + P+ + A + IACG H AV G
Sbjct: 88 VYSWGWGDFGRLGH-GNSSDVFTPQPVK-------ALQGLKIKQIACGDSHCLAVTMAGQ 139
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ +WG N+ GQLG GT E P+K++ + VK I+ GA TAA+ E DG +
Sbjct: 140 VQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGVCVKMIAAGAEHTAAVTE----DGDLYG- 194
Query: 143 RLWVWGQ----NQGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
W WG+ G RL P + + V+CG H + +S+ G L +
Sbjct: 195 --WGWGRYGNLGLGDRNDRLL-----PEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTY 247
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G+++YGQLG G + L ++ EA + I+Q+S G H+ A++ G++Y
Sbjct: 248 GWSKYGQLGHGDFEDHLVPHKL---------EALKDSTISQISGGWRHTMALTSEGKLYG 298
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG GQ+G + + D P +V + I VACG H+ AL+ K +++WG
Sbjct: 299 WGWNKFGQVG---VGNNDDHCSPVQVHFPEDQKISQVACGWRHTLALSEKKNVFSWGRGT 355
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
+GQLG G + RN P+L+
Sbjct: 356 SGQLGNG-------------EIVDRNTPVLI 373
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 8/98 (8%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ ++ +Y WG+N GQ G + + PE + + +ACG HT A
Sbjct: 290 LTSEGKLYGWGWNKFGQVGVGNNDDHCSPVQVHFPE--------DQKISQVACGWRHTLA 341
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSE 114
++ +F+WG GQLG+G R P + L ++
Sbjct: 342 LSEKKNVFSWGRGTSGQLGNGEIVDRNTPVLIDALSTD 379
>gi|195490361|ref|XP_002093107.1| GE21143 [Drosophila yakuba]
gi|194179208|gb|EDW92819.1| GE21143 [Drosophila yakuba]
Length = 1057
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 112/393 (28%), Positives = 173/393 (44%), Gaps = 84/393 (21%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG GQ G G E Q+ P Q+P P A + +ACGH HT + ++G
Sbjct: 7 LYCWGSTSHGQLGLGGIEDEQILTPSQIP----WTPDTAVQQ---VACGHRHTLFLTANG 59
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
++ G+N+ QLG E K P + +LQ
Sbjct: 60 KVYACGSNDHSQLGH--ELPTKRPLLIPELQ----------------------------- 88
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGR 201
+ ++ Q+SCGS H +ALSE G + +WG N+ GQLG
Sbjct: 89 ------------------------DYVVIQISCGSRHSLALSEWGQVLSWGDNDCGQLGH 124
Query: 202 GITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG 261
E +Q P+V++ + + Q++CG HS A++ GE+Y+WG GQLG
Sbjct: 125 ATDKEIVQLPKVVRQLVS--------KTVVQIACGNNHSLALTSCGELYSWGSNIYGQLG 176
Query: 262 HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQ- 320
S + P R+ L GI + +ACGG HS ++ GA++ WG + GQLGL +
Sbjct: 177 VNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDEA 236
Query: 321 TRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANE 380
R++ P + T R + GV+ VACG ++ +G + G +YGQ +
Sbjct: 237 NRAY---PTQLKT-LRTL-------GVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHG 285
Query: 381 KSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
S+ P V +G + ++A G H+ L
Sbjct: 286 FSSNEMLPRMVMELMGSTITQVACGNRHTLALV 318
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 143/313 (45%), Gaps = 44/313 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y G N Q G + +P + P P + + I+CG H+ A
Sbjct: 55 LTANGKVYACGSNDHSQLGHE-------LPTKRP---LLIPELQDYVVIQISCGSRHSLA 104
Query: 77 VASDGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
++ G + +WG N+ GQLG T+ E + P+ V+QL S+ V I+CG + + A+
Sbjct: 105 LSEWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALT----- 159
Query: 136 DGTISTSRLWVWGQN----QGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSE 184
S L+ WG N G N P+ P + + ++CG H +S+
Sbjct: 160 ----SCGELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISK 215
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G + WG N GQLG + Y L L + V+CG+ S ++
Sbjct: 216 SGAVFGWGRNNCGQLGLNDEAN--------RAYPTQLKTLRTL-GVRFVACGDEFSVFLT 266
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGA 303
G V+T G G+ GQLGH E+LPR V+ L G I VACG H+ AL S+G
Sbjct: 267 NEGGVFTCGAGAYGQLGH---GFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGR 323
Query: 304 LYAWGGSQAGQLG 316
+YA+G +GQLG
Sbjct: 324 VYAFGLGSSGQLG 336
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 123/269 (45%), Gaps = 42/269 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+ WG N GQ G + +++PK + + + + IACG+ H+ A+ S G
Sbjct: 111 VLSWGDNDCGQLGHATDKEIVQLPKVVRQLV-------SKTVVQIACGNNHSLALTSCGE 163
Query: 83 LFTWGANEFGQLGDGTEEGRKH---PEKVKQLQSEFVKSISCGAHCTAAIAEP------- 132
L++WG+N +GQLG + + H P ++ L + +I+CG + + I++
Sbjct: 164 LYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWG 223
Query: 133 RENDGTISTSRLWVWGQNQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
R N G + G N +N +P T V+CG V L+ G +
Sbjct: 224 RNNCGQL--------GLNDEANRAYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGGVFT 273
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS-AAVSENGEV 249
G YGQLG G + + PR++ ITQV+CG H+ A V G V
Sbjct: 274 CGAGAYGQLGHGFSSNEML-PRMVMELMG--------STITQVACGNRHTLALVPSRGRV 324
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
Y +GLGS GQLG S +S +LP+ V+
Sbjct: 325 YAFGLGSSGQLGTRSTKS---LMLPQVVI 350
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 93/202 (46%), Gaps = 22/202 (10%)
Query: 23 IYVWGYNHSGQTGRKGRE--RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
+Y WG N GQ G + P +L L G P A IACG H+ ++
Sbjct: 164 LYSWGSNIYGQLGVNSPKDLTHCNYPLRLT-TLLGIPLAA------IACGGNHSFLISKS 216
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N GQLG E R +P ++K L++ V+ ++CG + + N+G +
Sbjct: 217 GAVFGWGRNNCGQLGLNDEANRAYPTQLKTLRTLGVRFVACGDEFSVFLT----NEGGVF 272
Query: 141 TSRLWVWGQ-----NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC-GLLQAWGYN 194
T +GQ + PR+ + I QV+CG+ H +AL G + A+G
Sbjct: 273 TCGAGAYGQLGHGFSSNEMLPRMVMELM--GSTITQVACGNRHTLALVPSRGRVYAFGLG 330
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG T + L P+V+ G
Sbjct: 331 SSGQLGTRST-KSLMLPQVVIG 351
>gi|302855419|ref|XP_002959204.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
nagariensis]
gi|300255434|gb|EFJ39741.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
nagariensis]
Length = 367
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 110/339 (32%), Positives = 160/339 (47%), Gaps = 52/339 (15%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++CG H+ A+ S G + +WG E GQLG G + P+ + L ++S+ CGA T
Sbjct: 18 VSCGSSHSVAILSCGIVTSWGRGEDGQLGHGQADECLAPKAISTLTDAGIESVVCGAEYT 77
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCG 175
A+A R G + + W WG +F RL G F P I + +V+CG
Sbjct: 78 IAVAPSR---GQVYS---WGWG-----DFGRLGHGDCNDVFVPRPIEFFSGRPVHRVACG 126
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
H + ++ G L +G N+ GQLG G T + L V+ A + E++ V+C
Sbjct: 127 DTHTLVVAGEGELFTFGRNQNGQLGLGHTNDCLSPQLVV---------ALQGERVRSVAC 177
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
G HS A +E+G V++WG G G LG Q LP RVV L+GI + CG HS
Sbjct: 178 GSEHSLAATESGTVFSWGWGRYGNLGDGESQ---DRYLPTRVVGLEGIRMVSAECGWRHS 234
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLVAC 352
++ G ++ +G S+ GQLG G T R +P V + VA
Sbjct: 235 AVVSEDGRVFTFGWSKYGQLGHGDHTD-------------RTVPCQVAALRHTRISSVAG 281
Query: 353 GHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
G HT+ G ++GWG+N +GQ S+ PSPV
Sbjct: 282 GWRHTMAADSSGNLYGWGWNKFGQLGLGDSSD--RPSPV 318
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 120/371 (32%), Positives = 164/371 (44%), Gaps = 63/371 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA-SDG 81
+ WG GQ G G+ + PK + AG S + CG E+T AVA S G
Sbjct: 34 VTSWGRGEDGQLG-HGQADECLAPKAISTLT---DAGIES----VVCGAEYTIAVAPSRG 85
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+++WG +FG+LG G P ++ V ++CG T +A E
Sbjct: 86 QVYSWGWGDFGRLGHGDCNDVFVPRPIEFFSGRPVHRVACGDTHTLVVAGEGE------- 138
Query: 142 SRLWVWGQNQGSNFPRLFWG-AFTPNTIIC-------QVSCGSVHVVALSECGLLQAWGY 193
L+ +G+NQ +P ++ V+CGS H +A +E G + +WG+
Sbjct: 139 --LFTFGRNQNGQLGLGHTNDCLSPQLVVALQGERVRSVACGSEHSLAATESGTVFSWGW 196
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS--CGEYHSAAVSENGEVYT 251
YG LG G + + RV+ LE I VS CG HSA VSE+G V+T
Sbjct: 197 GRYGNLGDGESQDRYLPTRVVG-----------LEGIRMVSAECGWRHSAVVSEDGRVFT 245
Query: 252 WGLGSVGQLGHCSLQSGD--KELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
+G GQLGH GD +P +V AL I VA G H+ A S G LY WG
Sbjct: 246 FGWSKYGQLGH-----GDHTDRTVPCQVAALRHTRISSVAGGWRHTMAADSSGNLYGWGW 300
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV----VPNGVQLVACGHSHTLVYMRDGR 365
++ GQLGLG D+ R P+LV V LV CG HT+ GR
Sbjct: 301 NKFGQLGLG-------------DSSDRPSPVLVGGALAGQRVSLVTCGWRHTVAVTEGGR 347
Query: 366 IHGWGYNSYGQ 376
++ WG GQ
Sbjct: 348 VYSWGRGVNGQ 358
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/315 (31%), Positives = 144/315 (45%), Gaps = 44/315 (13%)
Query: 18 PAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELF-GCPAGANSRWLDIACGHEHTAA 76
P++ +Y WG+ G+ G G + +P+ P E F G P +ACG HT
Sbjct: 82 PSRGQVYSWGWGDFGRLG-HGDCNDVFVPR--PIEFFSGRPV------HRVACGDTHTLV 132
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
VA +G LFT+G N+ GQLG G P+ V LQ E V+S++CG+ + A E
Sbjct: 133 VAGEGELFTFGRNQNGQLGLGHTNDCLSPQLVVALQGERVRSVACGSEHSLAATE----S 188
Query: 137 GTISTSRLWVW--------GQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
GT+ + W W G++Q P G + CG H +SE G +
Sbjct: 189 GTVFS---WGWGRYGNLGDGESQDRYLPTRVVG--LEGIRMVSAECGWRHSAVVSEDGRV 243
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+G+++YGQLG G + R + L +I+ V+ G H+ A +G
Sbjct: 244 FTFGWSKYGQLGHGDHTD-----RTVPCQVAALRHT----RISSVAGGWRHTMAADSSGN 294
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVV---ALDGIFIKDVACGGVHSCALTSKGALY 305
+Y WG GQLG GD P V+ AL G + V CG H+ A+T G +Y
Sbjct: 295 LYGWGWNKFGQLG-----LGDSSDRPSPVLVGGALAGQRVSLVTCGWRHTVAVTEGGRVY 349
Query: 306 AWGGSQAGQLGLGPQ 320
+WG GQLG G +
Sbjct: 350 SWGRGVNGQLGHGAE 364
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 122/248 (49%), Gaps = 26/248 (10%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ VSCGS H VA+ CG++ +WG E GQLG G E L P+ I L +A
Sbjct: 15 VTAVSCGSSHSVAILSCGIVTSWGRGEDGQLGHGQADECLA-PKAI----STLTDA---- 65
Query: 229 KITQVSCG-EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
I V CG EY A G+VY+WG G G+LGH + +PR + G +
Sbjct: 66 GIESVVCGAEYTIAVAPSRGQVYSWGWGDFGRLGHGDC---NDVFVPRPIEFFSGRPVHR 122
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
VACG H+ + +G L+ +G +Q GQLGLG + +D + + + V
Sbjct: 123 VACGDTHTLVVAGEGELFTFGRNQNGQLGLG----------HTNDCLSPQLVVALQGERV 172
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA--GG 405
+ VACG H+L G + WG+ YG + +S + P+ V G +R ++A G
Sbjct: 173 RSVACGSEHSLAATESGTVFSWGWGRYGNLGDGESQDRYLPTRVVGLEG-IRMVSAECGW 231
Query: 406 GHSAVLAD 413
HSAV+++
Sbjct: 232 RHSAVVSE 239
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG+N GQ G L P + A A R + CG HT AV G
Sbjct: 295 LYGWGWNKFGQLG-------LGDSSDRPSPVLVGGALAGQRVSLVTCGWRHTVAVTEGGR 347
Query: 83 LFTWGANEFGQLGDGTEE 100
+++WG GQLG G E+
Sbjct: 348 VYSWGRGVNGQLGHGAEQ 365
>gi|395541966|ref|XP_003772907.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3, partial
[Sarcophilus harrisii]
Length = 638
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 108/312 (34%), Positives = 154/312 (49%), Gaps = 52/312 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G ER+ P+Q+ A A+ + +ACG H+ A++ G
Sbjct: 56 VYTCGSNTKGQLGH---EREGNKPEQIG-------ALADQHIVHVACGESHSLALSDQGQ 105
Query: 83 LFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
LF+WGA GQLG TE+ P +K+L + + +SCG HC A A DG
Sbjct: 106 LFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMALAA-----DG--- 157
Query: 141 TSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
+ + WGQN+ G FP +P + + QV+ G H ALS G
Sbjct: 158 --QFFTWGQNRHGQLGLGKEFP----SQASPQRVKSLEGIPLAQVAAGGAHSFALSLSGA 211
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ WG N GQLG + R + K L +K+ +SCGE H+A ++++G
Sbjct: 212 VFGWGRNNAGQLGLSDETD-----RQSPCHVKLL----RTQKVVYISCGEEHTAVLTKSG 262
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYA 306
V+T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG H+ A S G +YA
Sbjct: 263 GVFTFGAGSFGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 319
Query: 307 WGGSQAGQLGLG 318
+G GQLG G
Sbjct: 320 FGCGARGQLGTG 331
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 154/314 (49%), Gaps = 24/314 (7%)
Query: 105 PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT 164
P+ + +K ++CG + + + E E S ++ + + +G+ ++ GA
Sbjct: 26 PQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCGSNTKGQLGHEREGNKPEQI--GALA 83
Query: 165 PNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
I+ V+CG H +ALS+ G L +WG GQLG T + + PR+IK +
Sbjct: 84 DQHIV-HVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQ----- 137
Query: 225 PELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF 284
+ I QVSCG +H A++ +G+ +TWG GQLG + + P+RV +L+GI
Sbjct: 138 ---QMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLG--KEFPSQASPQRVKSLEGIP 192
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP 344
+ VA GG HS AL+ GA++ WG + AGQLGL +T +S + + L+
Sbjct: 193 LAQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETD------RQSPCHVK----LLRT 242
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAA 403
V ++CG HT V + G + +G S+GQ ++ P V +G EV ++A
Sbjct: 243 QKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVTQIAC 302
Query: 404 GGGHSAVLADACSL 417
G H+ + L
Sbjct: 303 GRQHTLAFVPSSGL 316
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 145/343 (42%), Gaps = 63/343 (18%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIP---KQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
++ WG GQ G E + IP K+L ++ L ++CG+ H A+A+
Sbjct: 106 LFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMI----------LQVSCGNWHCMALAA 155
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG FTWG N GQLG G E + P++VK L+ + ++ G + A++
Sbjct: 156 DGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALS-------- 207
Query: 139 ISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQV-----------SCGSVHVVALSECGL 187
+ ++ WG+N N +L T C V SCG H L++ G
Sbjct: 208 -LSGAVFGWGRN---NAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 263
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSEN 246
+ +G +GQLG + + RV++ ++TQ++CG H+ A V +
Sbjct: 264 VFTFGAGSFGQLGHDSMNDEVNPRRVLELMG---------SEVTQIACGRQHTLAFVPSS 314
Query: 247 GEVYTWGLGSVGQLG---HCSLQ---------SGDKELLPRRVVALDGIFIKDVACGGVH 294
G +Y +G G+ GQLG C+++ + L R + +K + GG
Sbjct: 315 GLIYAFGCGARGQLGTGHTCNVKCPSPVKGHWAAHNGQLSSRADSFKYHIVKHIFSGGDQ 374
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRN 337
+ L SK S A + Q + SLI +E+ +R
Sbjct: 375 TFVLCSKYE----NSSPADDFRIMNQAQYTSLINDETIAIWRQ 413
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 95/208 (45%), Gaps = 22/208 (10%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A + WG N GQ G G+E + Q L G P +A G H+ A
Sbjct: 153 LAADGQFFTWGQNRHGQLGL-GKEFPSQASPQRVKSLEGIPLA------QVAAGGAHSFA 205
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
++ G +F WG N GQLG E R+ P VK L+++ V ISCG TA + +
Sbjct: 206 LSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTK----S 261
Query: 137 GTISTSRLWVWGQ------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQ 189
G + T +GQ N N R+ + + Q++CG H +A + GL+
Sbjct: 262 GGVFTFGAGSFGQLGHDSMNDEVNPRRVLE---LMGSEVTQIACGRQHTLAFVPSSGLIY 318
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGY 217
A+G GQLG G TC ++ P +KG+
Sbjct: 319 AFGCGARGQLGTGHTCN-VKCPSPVKGH 345
>gi|357163608|ref|XP_003579788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Brachypodium distachyon]
Length = 449
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 98/321 (30%), Positives = 155/321 (48%), Gaps = 44/321 (13%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++ G H+ A+ L +WG E GQLG G E R P + + + S+ CGA T
Sbjct: 26 VSAGASHSVALLEGNVLCSWGRGEDGQLGHGDAEDRLVPTVISGFDAPRITSVICGADHT 85
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCG 175
A +E + W WG +F RL G FTP + I Q++CG
Sbjct: 86 TAYSEEEQQ------VYSWGWG-----DFGRLGHGNSSDVFTPQPVRALQGIKIKQMACG 134
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
H +A++ G +Q+WG N+ GQLG G T + L P+ I+ + + ++
Sbjct: 135 DSHCLAVTMGGEVQSWGRNQNGQLGLGTTEDSLL-PQKIQAFEGIC--------VKMIAA 185
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
G H+AAV+E+G++Y WG G G LG L + +P +V ++G + +ACG H+
Sbjct: 186 GAEHTAAVTEDGDLYGWGWGRYGNLG---LGDRNDRFVPEKVSLVEGEKMVLIACGWRHT 242
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS 355
++S G LY +G S+ GQLG G + D F + + + ++ G
Sbjct: 243 ITVSSSGILYTYGWSKYGQLGHG----------DFEDHLFPHKVEALKDSSTSQISGGWR 292
Query: 356 HTLVYMRDGRIHGWGYNSYGQ 376
HT+ DG+++GWG+N +GQ
Sbjct: 293 HTMALTSDGKLYGWGWNKFGQ 313
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 110/367 (29%), Positives = 161/367 (43%), Gaps = 62/367 (16%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD-GTLF 84
WG GQ G E +L +P + G A R + CG +HT A + + ++
Sbjct: 45 WGRGEDGQLGHGDAEDRL-----VPTVISGFDA---PRITSVICGADHTTAYSEEEQQVY 96
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGTISTSR 143
+WG +FG+LG G P+ V+ LQ +K ++CG +HC A G + +
Sbjct: 97 SWGWGDFGRLGHGNSSDVFTPQPVRALQGIKIKQMACGDSHCLAVTM-----GGEVQS-- 149
Query: 144 LWVWGQNQ------GSNFPRLFWGAFTPNTIIC--QVSCGSVHVVALSECGLLQAWGYNE 195
WG+NQ G+ L IC ++ G+ H A++E G L WG+
Sbjct: 150 ---WGRNQNGQLGLGTTEDSLLPQKIQAFEGICVKMIAAGAEHTAAVTEDGDLYGWGWGR 206
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL---EKITQVSCGEYHSAAVSENGEVYTW 252
YG LG G + +F+ E L EK+ ++CG H+ VS +G +YT+
Sbjct: 207 YGNLGLGDRND------------RFVPEKVSLVEGEKMVLIACGWRHTITVSSSGILYTY 254
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G GQLGH + L P +V AL ++ G H+ ALTS G LY WG ++
Sbjct: 255 GWSKYGQLGHGDFED---HLFPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKF 311
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDGRIHGW 369
GQ+G G D+ P+ V+ V VACG HTL Y + W
Sbjct: 312 GQVGAG-------------DSVDHCSPVQVMFPAEQKVAQVACGWRHTLAYTEKKNVFAW 358
Query: 370 GYNSYGQ 376
G + GQ
Sbjct: 359 GRGTSGQ 365
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/238 (38%), Positives = 119/238 (50%), Gaps = 23/238 (9%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ VS G+ H VAL E +L +WG E GQLG G + L P VI G+ +AP
Sbjct: 23 VVLVSAGASHSVALLEGNVLCSWGRGEDGQLGHGDAEDRLV-PTVISGF-----DAP--- 73
Query: 229 KITQVSCGEYHSAAVSEN-GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+IT V CG H+ A SE +VY+WG G G+LGH + P+ V AL GI IK
Sbjct: 74 RITSVICGADHTTAYSEEEQQVYSWGWGDFGRLGHGN---SSDVFTPQPVRALQGIKIKQ 130
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
+ACG H A+T G + +WG +Q GQLGLG T SL+P + F I V
Sbjct: 131 MACGDSHCLAVTMGGEVQSWGRNQNGQLGLG--TTEDSLLPQKIQA-FEGIC-------V 180
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGG 405
+++A G HT DG ++GWG+ YG + P V GE L A G
Sbjct: 181 KMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRFVPEKVSLVEGEKMVLIACG 238
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 144/313 (46%), Gaps = 55/313 (17%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG+ G+ G G + P+ + A + +ACG H AV G
Sbjct: 95 VYSWGWGDFGRLGH-GNSSDVFTPQPVR-------ALQGIKIKQMACGDSHCLAVTMGGE 146
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ +WG N+ GQLG GT E P+K++ + VK I+ GA TAA+ E DG +
Sbjct: 147 VQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGICVKMIAAGAEHTAAVTE----DGDLYG- 201
Query: 143 RLWVWGQ----NQGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
W WG+ G R F P + + ++CG H + +S G+L +
Sbjct: 202 --WGWGRYGNLGLGDRNDR-----FVPEKVSLVEGEKMVLIACGWRHTITVSSSGILYTY 254
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G+++YGQLG G + L +V EA + +Q+S G H+ A++ +G++Y
Sbjct: 255 GWSKYGQLGHGDFEDHLFPHKV---------EALKDSSTSQISGGWRHTMALTSDGKLYG 305
Query: 252 WGLGSVGQLG------HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
WG GQ+G HCS P +V+ + VACG H+ A T K ++
Sbjct: 306 WGWNKFGQVGAGDSVDHCS---------PVQVMFPAEQKVAQVACGWRHTLAYTEKKNVF 356
Query: 306 AWGGSQAGQLGLG 318
AWG +GQLG G
Sbjct: 357 AWGRGTSGQLGHG 369
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 122/254 (48%), Gaps = 24/254 (9%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+ WG N +GQ G E L +P+++ C IA G EHTAAV DG
Sbjct: 147 VQSWGRNQNGQLGLGTTEDSL-LPQKIQAFEGICVK-------MIAAGAEHTAAVTEDGD 198
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+ WG +G LG G R PEKV ++ E + I+CG T ++ + G + T
Sbjct: 199 LYGWGWGRYGNLGLGDRNDRFVPEKVSLVEGEKMVLIACGWRHTITVS----SSGILYTY 254
Query: 143 RLWVWGQNQGSNFP-RLFWGAF--TPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
+GQ +F LF ++ Q+S G H +AL+ G L WG+N++GQ+
Sbjct: 255 GWSKYGQLGHGDFEDHLFPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQV 314
Query: 200 GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ 259
G G + + +V+ P +K+ QV+CG H+ A +E V+ WG G+ GQ
Sbjct: 315 GAGDSVDHCSPVQVM---------FPAEQKVAQVACGWRHTLAYTEKKNVFAWGRGTSGQ 365
Query: 260 LGHCSLQSGDKELL 273
LGH + +K L+
Sbjct: 366 LGHGEIVDRNKPLM 379
>gi|426364912|ref|XP_004049535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Gorilla gorilla gorilla]
Length = 1057
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 159/341 (46%), Gaps = 62/341 (18%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N R D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKRIRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLVGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKG--------------------------------------------YA 218
C+ P+++K Y
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV 232
Query: 219 KFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
L ++ +KI + CGE H+AA+++ G V+T+G G GQLGH S E+ PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH---NSTSHEINPRKVF 289
Query: 279 ALDGIFIKDVACGGVHSCALT-SKGALYAWGGSQAGQLGLG 318
L G + ++ACG H+ A S G +Y++G GQLG G
Sbjct: 290 ELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ ++ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGTDCKKQTS-----PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFV 310
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 126/256 (49%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLVGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG GT+ + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +T+++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTEIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GTDCKKQTSPQLLKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGYN 194
T +GQ N S+ PR + +I+ +++CG H A G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTEIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|428178045|gb|EKX46922.1| hypothetical protein GUITHDRAFT_86569 [Guillardia theta CCMP2712]
Length = 306
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 161/335 (48%), Gaps = 58/335 (17%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S +Y WG GQ G G E+ R P+ + L G N R ++CG++HTA + +
Sbjct: 6 SEVYSWGQGVLGQLGH-GDEKTQRQPRLVVAFL-----GFNVR--QVSCGNQHTAILMEN 57
Query: 81 GTLFTWGANEFGQLGDGTE--EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
G +FT+G FGQLG G P V LQ + VK ++CG H T A+
Sbjct: 58 GEVFTFGRGNFGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCAL--------- 108
Query: 139 ISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGL 187
I +L+ WG + + RL G +P + + V+ G H + E G
Sbjct: 109 IDNGQLYTWGSGE---YGRLGHGDEVRQASPKLVESLQGKEVTFVAAGGFHSSVIIEGGN 165
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
L WG +GQLG G + + P+++KG + + +V+CG +H+ ++++
Sbjct: 166 LLTWGGGYFGQLGHGDETD-RKTPKMVKGVQQCIAH--------EVACGTHHTLMLTQSQ 216
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
EV+TWG G G+LG + +K P + AL G+ + ++ GG HS ALTS+G LY W
Sbjct: 217 EVWTWGSGEFGKLG---IGDEEKHAEPIMITALQGVGVIHISTGGFHSAALTSEGVLYTW 273
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
GG GQLG G D +NIP++V
Sbjct: 274 GGGDKGQLGHG-------------DENSQNIPVVV 295
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 124/271 (45%), Gaps = 39/271 (14%)
Query: 156 PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEG-LQGPRVI 214
PRL N + QVSCG+ H L E G + +G +GQLG+G + + P ++
Sbjct: 30 PRLVVAFLGFN--VRQVSCGNQHTAILMENGEVFTFGRGNFGQLGQGASVTANVSTPALV 87
Query: 215 KGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGD--KEL 272
A + + + QV+CG +H+ A+ +NG++YTWG G G+LGH GD ++
Sbjct: 88 S--------ALQGKHVKQVACGWHHTCALIDNGQLYTWGSGEYGRLGH-----GDEVRQA 134
Query: 273 LPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESD 332
P+ V +L G + VA GG HS + G L WGG GQLG G +T
Sbjct: 135 SPKLVESLQGKEVTFVAAGGFHSSVIIEGGNLLTWGGGYFGQLGHGDETD---------- 184
Query: 333 TYFRNIPILVVPNGVQL-----VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWY 387
R P +V GVQ VACG HTL+ + + WG +G+
Sbjct: 185 ---RKTPKMV--KGVQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGKLGIGDEEKHAE 239
Query: 388 PSPVDWCVGE-VRKLAAGGGHSAVLADACSL 417
P + G V ++ GG HSA L L
Sbjct: 240 PIMITALQGVGVIHISTGGFHSAALTSEGVL 270
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 88/177 (49%), Gaps = 18/177 (10%)
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
E EVY+WG G +GQLGH ++ + PR VVA G ++ V+CG H+ L G +
Sbjct: 4 EGSEVYSWGQGVLGQLGHGDEKT---QRQPRLVVAFLGFNVRQVSCGNQHTAILMENGEV 60
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYM 361
+ +G GQLG G S+ N S P LV V+ VACG HT +
Sbjct: 61 FTFGRGNFGQLGQGA-----SVTANVST------PALVSALQGKHVKQVACGWHHTCALI 109
Query: 362 RDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
+G+++ WG YG+ + P V+ G EV +AAGG HS+V+ + +L
Sbjct: 110 DNGQLYTWGSGEYGRLGHGDEVRQASPKLVESLQGKEVTFVAAGGFHSSVIIEGGNL 166
>gi|195126363|ref|XP_002007640.1| GI13052 [Drosophila mojavensis]
gi|193919249|gb|EDW18116.1| GI13052 [Drosophila mojavensis]
Length = 1053
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 110/393 (27%), Positives = 176/393 (44%), Gaps = 84/393 (21%)
Query: 23 IYVWGYNHSGQTGRKG-RERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG GQ G G E Q+ P ++P + P A ++ IACGH HT + + G
Sbjct: 3 LYCWGNASHGQLGLGGIEEEQILTPSRIPWK----PDSAVNQ---IACGHRHTLFLTASG 55
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
++ G+N++ QLG E K P ++ +LQ
Sbjct: 56 KVYACGSNDYSQLGH--ELPTKRPLQIPELQ----------------------------- 84
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGR 201
+ +I Q++CGS H +ALSE G + +WG NE GQLG
Sbjct: 85 ------------------------DYVITQIACGSRHSMALSEWGQVFSWGDNECGQLGH 120
Query: 202 GITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG 261
+ ++ P++++ + + Q++CG HS A++ GE+Y+WG GQLG
Sbjct: 121 ASDQDIVKLPKIVRNLVS--------KTVVQIACGSNHSLALTCCGELYSWGSNLYGQLG 172
Query: 262 HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQT 321
S + P R+ L GI + +ACGG HS ++ A++ WG + GQLGL +T
Sbjct: 173 VSSPNDLQQSNTPMRLTTLLGIPVSAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDET 232
Query: 322 -RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANE 380
R++ P + T R + GV+ VACG ++ +G + G +YGQ +
Sbjct: 233 NRAY---PTQLKT-LRTL-------GVRFVACGDEFSVFLTIEGGVFTCGAGAYGQLGHG 281
Query: 381 KSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
S+ P V +G + ++A G H+ L
Sbjct: 282 FSSNEMLPRMVMELMGSTISQVACGNRHTLALV 314
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/323 (30%), Positives = 148/323 (45%), Gaps = 45/323 (13%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y G N Q G + +P + P ++ P + IACG H+ A
Sbjct: 51 LTASGKVYACGSNDYSQLGHE-------LPTKRPLQI---PELQDYVITQIACGSRHSMA 100
Query: 77 VASDGTLFTWGANEFGQLGDGTEEG-RKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
++ G +F+WG NE GQLG +++ K P+ V+ L S+ V I+CG++ + A+
Sbjct: 101 LSEWGQVFSWGDNECGQLGHASDQDIVKLPKIVRNLVSKTVVQIACGSNHSLALT----- 155
Query: 136 DGTISTSRLWVWGQN----QGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSE 184
L+ WG N G + P + TP + + ++CG H +S+
Sbjct: 156 ----CCGELYSWGSNLYGQLGVSSPNDLQQSNTPMRLTTLLGIPVSAIACGGNHSFLISK 211
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
+ WG N GQLG + Y L L + V+CG+ S ++
Sbjct: 212 SSAVFGWGRNNCGQLGLNDETN--------RAYPTQLKTLRTL-GVRFVACGDEFSVFLT 262
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGA 303
G V+T G G+ GQLGH E+LPR V+ L G I VACG H+ AL S+G
Sbjct: 263 IEGGVFTCGAGAYGQLGHG---FSSNEMLPRMVMELMGSTISQVACGNRHTLALVPSRGR 319
Query: 304 LYAWGGSQAGQLGLGPQTRSFSL 326
+Y +G +GQLG T+S +L
Sbjct: 320 IYGFGLGSSGQLG-TRNTKSLNL 341
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 91/202 (45%), Gaps = 22/202 (10%)
Query: 23 IYVWGYNHSGQTGRKGRE--RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
+Y WG N GQ G +Q P +L L G P A IACG H+ ++
Sbjct: 160 LYSWGSNLYGQLGVSSPNDLQQSNTPMRLT-TLLGIPVSA------IACGGNHSFLISKS 212
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+F WG N GQLG E R +P ++K L++ V+ ++CG + + +G +
Sbjct: 213 SAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLT----IEGGVF 268
Query: 141 TSRLWVWGQ-----NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC-GLLQAWGYN 194
T +GQ + PR+ + I QV+CG+ H +AL G + +G
Sbjct: 269 TCGAGAYGQLGHGFSSNEMLPRMVMELM--GSTISQVACGNRHTLALVPSRGRIYGFGLG 326
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG T + L P+++ G
Sbjct: 327 SSGQLGTRNT-KSLNLPQLVIG 347
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 15/167 (8%)
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
E+Y WG S GQLG ++ ++ L P R+ + +ACG H+ LT+ G +YA
Sbjct: 2 ELYCWGNASHGQLGLGGIEE-EQILTPSRIPWKPDSAVNQIACGHRHTLFLTASGKVYAC 60
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G + QLG T+ IP D I ACG H++ G++
Sbjct: 61 GSNDYSQLGHELPTKRPLQIPELQDYVITQI------------ACGSRHSMALSEWGQVF 108
Query: 368 GWGYNSYGQAAN-EKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
WG N GQ + P V V + V ++A G HS L
Sbjct: 109 SWGDNECGQLGHASDQDIVKLPKIVRNLVSKTVVQIACGSNHSLALT 155
>gi|383455292|ref|YP_005369281.1| hypothetical protein COCOR_03305 [Corallococcus coralloides DSM
2259]
gi|380729146|gb|AFE05148.1| hypothetical protein COCOR_03305 [Corallococcus coralloides DSM
2259]
Length = 744
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 126/407 (30%), Positives = 187/407 (45%), Gaps = 60/407 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + ++ WG N GQ G G P Q+ L G +A G H+ A
Sbjct: 109 VRSDGTVWAWGRNDDGQLG-DGTLSTRGDPVQVQ-GLSGVTT--------VALGATHSLA 158
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG+++ WGAN+ GQLGDGT R+ P+ V LQ V +++ GA+ + A+ +D
Sbjct: 159 LCYDGSVWAWGANDHGQLGDGTSIARRTPQMVAGLQE--VVAVAAGANHSLAVL----SD 212
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
GT+ W WG+N G+ R + I V+ G+ H +AL G + A
Sbjct: 213 GTV-----WAWGENYDGQLGDGTTVTRRVPVPIQGLSGIVAVASGTSHSLALRYDGNVWA 267
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG N GQLG G + +V EL I V G +S AV +G V+
Sbjct: 268 WGSNYSGQLGDGSSLSRSSPVQVT-----------ELSGIVSVEGGPDYSMAVRYDGTVW 316
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
TWG+ + GQLG + + +P + L G+ VA G H+ A+ + +++AWGG+
Sbjct: 317 TWGINTYGQLGDGTTIA---RSVPVQTSGLSGVVA--VAAGRTHALAMRANNSIWAWGGN 371
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWG 370
GQ G ++RS YF IL N V +A + H+L DG + WG
Sbjct: 372 VNGQ--RGDESRSV---------YFSPRTIL---NEVVTMAATNDHSLAVRSDGGLWAWG 417
Query: 371 YNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSL 417
N+ GQ + + W P+ V +G V +AAG HS + D SL
Sbjct: 418 ANNEGQLGDGTTKNRWAPAEV---LGNVVSVAAGRRHSLAVRDDGSL 461
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 127/407 (31%), Positives = 173/407 (42%), Gaps = 70/407 (17%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A ++I+ WG N +GQ G + R P+ + E+ + +A ++H+ AV
Sbjct: 361 ANNSIWAWGGNVNGQRGDESRSVYFS-PRTILNEV-----------VTMAATNDHSLAVR 408
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
SDG L+ WGAN GQLGDGT + R P +V V S++ G + A+ +DG+
Sbjct: 409 SDGGLWAWGANNEGQLGDGTTKNRWAPAEVL----GNVVSVAAGRRHSLAV----RDDGS 460
Query: 139 ISTSRLWVWGQNQGSNFPRLFWGAFTPNTI---------ICQVSCGSVHVVALSECGLLQ 189
LW WG N +L G + TI I V+ GS + VAL L
Sbjct: 461 -----LWAWGSN---TVGQLGDGTGSSRTIPMQVPGISGIASVAAGSDYSVALRYDRTLW 512
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
AWG N YGQLG G T P ++G L I ++ G H AV NG V
Sbjct: 513 AWGENSYGQLGDGTTVN-RHVPTRVQG----------LSGIVAIATGNGHMLAVRSNGTV 561
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
+ WG S GQLG + P +V L GI HS A+ G L+AWG
Sbjct: 562 WAWGDNSSGQLGDGTTI---NRATPVQVQVLSGIVAVAAGA--AHSLAVRYDGTLWAWGI 616
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGW 369
+ QLG G + IP T + I V V+ H+L + DG + W
Sbjct: 617 NNTSQLGDG------TGIPRLVPTQVQGIGSAVA------VSAAKHHSLAVLADGTLWDW 664
Query: 370 GYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL-----AAGGGHSAVL 411
G N+YGQ + PS V G + + G GHS L
Sbjct: 665 GANNYGQLGRNQDNTNPTPSKVTTLTGVTEAVGTFGYSIGFGHSLAL 711
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 166/382 (43%), Gaps = 53/382 (13%)
Query: 3 INEIIGETARPVDNIPAKS--AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA 60
+NE++ A ++ +S ++ WG N+ GQ G + + P E+ G
Sbjct: 391 LNEVVTMAATNDHSLAVRSDGGLWAWGANNEGQLGDGTTKN-----RWAPAEVLGNV--- 442
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
+ +A G H+ AV DG+L+ WG+N GQLGDGT R P +V + + S++
Sbjct: 443 ----VSVAAGRRHSLAVRDDGSLWAWGSNTVGQLGDGTGSSRTIPMQVPGISG--IASVA 496
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSC 174
G+ + A+ R LW WG+N G+ R + I ++
Sbjct: 497 AGSDYSVALRYDRT---------LWAWGENSYGQLGDGTTVNRHVPTRVQGLSGIVAIAT 547
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G+ H++A+ G + AWG N GQLG G T +V L I V+
Sbjct: 548 GNGHMLAVRSNGTVWAWGDNSSGQLGDGTTINRATPVQV-----------QVLSGIVAVA 596
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVH 294
G HS AV +G ++ WG+ + QLG +G L+P +V + V+ H
Sbjct: 597 AGAAHSLAVRYDGTLWAWGINNTSQLGDG---TGIPRLVPTQVQGIGSAVA--VSAAKHH 651
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGH 354
S A+ + G L+ WG + GQLG N + + + + G + G
Sbjct: 652 SLAVLADGTLWDWGANNYGQLGRNQDN------TNPTPSKVTTLTGVTEAVGTFGYSIGF 705
Query: 355 SHTLVYMRDGRIHGWGYNSYGQ 376
H+L DG + GWG+N+YGQ
Sbjct: 706 GHSLALRSDGYLVGWGHNTYGQ 727
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 129/439 (29%), Positives = 183/439 (41%), Gaps = 89/439 (20%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N+SGQ G G P Q+ EL G + + G +++ AV DGT
Sbjct: 265 VWAWGSNYSGQLG-DGSSLSRSSPVQVT-ELSGI--------VSVEGGPDYSMAVRYDGT 314
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++TWG N +GQLGDGT R P + L ++ A T A+A N
Sbjct: 315 VWTWGINTYGQLGDGTTIARSVPVQTSGLSGV----VAVAAGRTHALAMRANNS------ 364
Query: 143 RLWVWGQN----QGSNFPRLFWGAFTPNTIICQV---SCGSVHVVALSECGLLQAWGYNE 195
+W WG N +G ++ F+P TI+ +V + + H +A+ G L AWG N
Sbjct: 365 -IWAWGGNVNGQRGDESRSVY---FSPRTILNEVVTMAATNDHSLAVRSDGGLWAWGANN 420
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
GQLG G T A L + V+ G HS AV ++G ++ WG
Sbjct: 421 EGQLGDGTT-------------KNRWAPAEVLGNVVSVAAGRRHSLAVRDDGSLWAWGSN 467
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
+VGQLG + G +P +V + GI VA G +S AL L+AWG + GQL
Sbjct: 468 TVGQLGDGT---GSSRTIPMQVPGISGI--ASVAAGSDYSVALRYDRTLWAWGENSYGQL 522
Query: 316 GLGPQT---------------------------RSFSLIPNESD----------TYFRNI 338
G G RS + D T R
Sbjct: 523 GDGTTVNRHVPTRVQGLSGIVAIATGNGHMLAVRSNGTVWAWGDNSSGQLGDGTTINRAT 582
Query: 339 PILV-VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE 397
P+ V V +G+ VA G +H+L DG + WG N+ Q + P+ V +G
Sbjct: 583 PVQVQVLSGIVAVAAGAAHSLAVRYDGTLWAWGINNTSQLGDGTGIPRLVPTQVQ-GIGS 641
Query: 398 VRKLAAGGGHS-AVLADAC 415
++A HS AVLAD
Sbjct: 642 AVAVSAAKHHSLAVLADGT 660
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 101/223 (45%), Gaps = 29/223 (13%)
Query: 223 EAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQS-GDKELLPRRVVALD 281
+ P L + + G+ S AV +G V+ WG GQLG +L + GD P +V L
Sbjct: 89 QLPGLSGMVSIDSGDDFSMAVRSDGTVWAWGRNDDGQLGDGTLSTRGD----PVQVQGLS 144
Query: 282 GIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL 341
G + VA G HS AL G+++AWG + GQLG G + R P +
Sbjct: 145 G--VTTVALGATHSLALCYDGSVWAWGANDHGQLGDGT-------------SIARRTPQM 189
Query: 342 VVPNGVQ---LVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEV 398
V G+Q VA G +H+L + DG + WG N GQ + + P P+ G V
Sbjct: 190 VA--GLQEVVAVAAGANHSLAVLSDGTVWAWGENYDGQLGDGTTVTRRVPVPIQGLSGIV 247
Query: 399 RKLAAGGGHSAVL---ADACSLKELCEFRLAESVTLSNASEIE 438
+A+G HS L + + +L + +LS +S ++
Sbjct: 248 -AVASGTSHSLALRYDGNVWAWGSNYSGQLGDGSSLSRSSPVQ 289
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 86/202 (42%), Gaps = 39/202 (19%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + ++ WG N SGQ G G P Q+ S + +A G H+ A
Sbjct: 555 VRSNGTVWAWGDNSSGQLG-DGTTINRATPVQVQ---------VLSGIVAVAAGAAHSLA 604
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V DGTL+ WG N QLGDGT R P +V+ + S ++S H + A+ D
Sbjct: 605 VRYDGTLWAWGINNTSQLGDGTGIPRLVPTQVQGIGSAV--AVSAAKHHSLAVLA----D 658
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQV---------------SCGSVHVVA 181
GT LW WG N N+ +L N +V S G H +A
Sbjct: 659 GT-----LWDWGAN---NYGQLGRNQDNTNPTPSKVTTLTGVTEAVGTFGYSIGFGHSLA 710
Query: 182 LSECGLLQAWGYNEYGQLGRGI 203
L G L WG+N YGQLG G+
Sbjct: 711 LRSDGYLVGWGHNTYGQLGTGV 732
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++ WG N+ GQ GR ++ P ++ L G + + G H+ A
Sbjct: 655 VLADGTLWDWGANNYGQLGRN-QDNTNPTPSKVT-TLTGVTEAVGT--FGYSIGFGHSLA 710
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHP 105
+ SDG L WG N +GQLG G E P
Sbjct: 711 LRSDGYLVGWGHNTYGQLGTGVPENIPVP 739
>gi|340378681|ref|XP_003387856.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Amphimedon queenslandica]
Length = 599
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 122/408 (29%), Positives = 190/408 (46%), Gaps = 63/408 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y+WG G+ G K + P+ LP + G N IACG HT A+ S G
Sbjct: 164 LYLWGGGDRGRLGHKDDK-----PRFLP-NVVESLLGQNVTM--IACGGSHTIALNSKGQ 215
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F+WGA G LG G R P + L+ V ++C + +A I+E DG
Sbjct: 216 VFSWGAGPQGCLGHGNLRDRYSPLMIDGPLRDVNVVHVACYENHSAVISE----DGN--- 268
Query: 142 SRLWVWGQN-----------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
L+ WG+ PRL + T I QV+CG H + + E G + +
Sbjct: 269 --LYTWGKAGPFLGYMDDSVTKQTKPRLVDALY--GTRIVQVACGRSHTLVIDEEGRVYS 324
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
+G N++G+LG+G + + P ++ P L I +VSCG +HSAA+ E+G ++
Sbjct: 325 FGINKFGELGQGHD-KAITKPTMV----------PNLVSICKVSCGRHHSAAIDEDGVLF 373
Query: 251 TWGLGSVGQLGHCSLQSGDKELL-PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
WG G+ GQLG Q K L P V + ++DV+CG H+ A+T+ G Y WG
Sbjct: 374 MWGWGARGQLG----QGEPKSLFSPTPVNGFNDQPLEDVSCGYGHTAAITANGVAYCWGD 429
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--LVACGHSHTLVYMRDGRIH 367
+ + Q G +P+ + +V+P+G++ + CG + T++ G++
Sbjct: 430 NASSQCG----------VPSSVYGELSSPRGIVLPSGIRPTQINCGANFTVLVTSIGQLF 479
Query: 368 GWGYNSYGQAAN--EKSTYAWYPSPVD-WCVGEVRKLAAGGGHSAVLA 412
WG N GQ N K T++ P PV+ V+ +A G H L
Sbjct: 480 TWGCNMSGQLGNGEAKKTFS-QPMPVESLSEKRVKMVACGEDHIGCLV 526
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 105/243 (43%), Gaps = 37/243 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I + +Y +G N G+ G +G ++ + P +P + C ++CG H+AA
Sbjct: 316 IDEEGRVYSFGINKFGELG-QGHDKAITKPTMVPNLVSIC---------KVSCGRHHSAA 365
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG LF WG GQLG G + P V + ++ +SCG TAAI
Sbjct: 366 IDEDGVLFMWGWGARGQLGQGEPKSLFSPTPVNGFNDQPLEDVSCGYGHTAAIT------ 419
Query: 137 GTISTSRLWVWGQNQGSN--FPRLFWGAF-TPNTII-------CQVSCGSVHVVALSECG 186
+ + WG N S P +G +P I+ Q++CG+ V ++ G
Sbjct: 420 ---ANGVAYCWGDNASSQCGVPSSVYGELSSPRGIVLPSGIRPTQINCGANFTVLVTSIG 476
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
L WG N GQLG G + P ++ ++ +++ V+CGE H + +
Sbjct: 477 QLFTWGCNMSGQLGNGEAKKTFSQPMPVESLSE--------KRVKMVACGEDHIGCLVGH 528
Query: 247 GEV 249
G V
Sbjct: 529 GWV 531
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 14/166 (8%)
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
++Y WG G G+LGH + LP V +L G + +ACGG H+ AL SKG +++W
Sbjct: 163 DLYLWGGGDRGRLGH---KDDKPRFLPNVVESLLGQNVTMIACGGSHTIALNSKGQVFSW 219
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G LG G +S P D R++ ++ VAC +H+ V DG ++
Sbjct: 220 GAGPQGCLGHGNLRDRYS--PLMIDGPLRDVNVV-------HVACYENHSAVISEDGNLY 270
Query: 368 GWGY-NSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
WG + ++ T P VD G + ++A G H+ V+
Sbjct: 271 TWGKAGPFLGYMDDSVTKQTKPRLVDALYGTRIVQVACGRSHTLVI 316
>gi|426364910|ref|XP_004049534.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Gorilla gorilla gorilla]
Length = 1049
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 159/341 (46%), Gaps = 62/341 (18%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N R D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKRIRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLVGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKG--------------------------------------------YA 218
C+ P+++K Y
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV 232
Query: 219 KFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
L ++ +KI + CGE H+AA+++ G V+T+G G GQLGH S E+ PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH---NSTSHEINPRKVF 289
Query: 279 ALDGIFIKDVACGGVHSCALT-SKGALYAWGGSQAGQLGLG 318
L G + ++ACG H+ A S G +Y++G GQLG G
Sbjct: 290 ELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ ++ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGTDCKKQTS-----PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFV 310
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 125/256 (48%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLVGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG GT+ + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH-SAAVSE 245
+ +G YGQLG T + +V + +T+++CG H SA V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTEIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GTDCKKQTSPQLLKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGYN 194
T +GQ N S+ PR + +I+ +++CG H A G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTEIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|21711763|gb|AAM75072.1| RE53774p [Drosophila melanogaster]
Length = 1058
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 112/393 (28%), Positives = 171/393 (43%), Gaps = 84/393 (21%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG GQ G G E Q+ P Q+P P A + +ACGH HT + + G
Sbjct: 7 LYCWGSTSHGQLGLGGIEDEQILTPSQIP----WTPDTAVQQ---VACGHRHTLFLTATG 59
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
++ G+N++ QLG R P + +LQ
Sbjct: 60 KVYACGSNDYSQLGHDLPTKR--PLLIPELQ----------------------------- 88
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGR 201
+ +I Q+ CGS H +ALS+ G + +WG N+ GQLG
Sbjct: 89 ------------------------DYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGH 124
Query: 202 GITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG 261
E +Q P+V++ + + Q++CG HS A++ GE+Y+WG GQLG
Sbjct: 125 ATDKEIVQLPKVVRQLVT--------KTVVQIACGNNHSLALTSCGELYSWGSNIYGQLG 176
Query: 262 HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQT 321
S P R+ L GI + +ACGG HS ++ GA++ WG + GQLGL +T
Sbjct: 177 VNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDET 236
Query: 322 -RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANE 380
RS+ P + T R + GV+ VACG ++ +G + G +YGQ +
Sbjct: 237 NRSY---PTQLKT-LRTL-------GVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHG 285
Query: 381 KSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
S+ P V +G + ++A G H+ L
Sbjct: 286 FSSNEMLPRMVMELMGSTITQVACGNRHTLALV 318
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 140/313 (44%), Gaps = 44/313 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y G N Q G +P + P P + + I CG H+ A
Sbjct: 55 LTATGKVYACGSNDYSQLGHD-------LPTKRP---LLIPELQDYVIIQICCGSRHSLA 104
Query: 77 VASDGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
++ G + +WG N+ GQLG T+ E + P+ V+QL ++ V I+CG + + A+
Sbjct: 105 LSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALT----- 159
Query: 136 DGTISTSRLWVWGQN----QGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSE 184
S L+ WG N G N P P + + ++CG H +S+
Sbjct: 160 ----SCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISK 215
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G + WG N GQLG + Y L L + V+CG+ S ++
Sbjct: 216 SGAVFGWGRNNCGQLGL--------NDETNRSYPTQLKTLRTL-GVRFVACGDEFSVFLT 266
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGA 303
G V+T G G+ GQLGH E+LPR V+ L G I VACG H+ AL S+G
Sbjct: 267 NEGGVFTCGAGAYGQLGH---GFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGR 323
Query: 304 LYAWGGSQAGQLG 316
+YA+G +GQLG
Sbjct: 324 VYAFGLGSSGQLG 336
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 120/269 (44%), Gaps = 42/269 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+ WG N GQ G + +++PK + + IACG+ H+ A+ S G
Sbjct: 111 VLSWGDNDCGQLGHATDKEIVQLPKVVR-------QLVTKTVVQIACGNNHSLALTSCGE 163
Query: 83 LFTWGANEFGQLGDGTEEGRKH---PEKVKQLQSEFVKSISCGAHCTAAIAEP------- 132
L++WG+N +GQLG + H P ++ L + +I+CG + + I++
Sbjct: 164 LYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWG 223
Query: 133 RENDGTISTSRLWVWGQNQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
R N G + G N +N +P T V+CG V L+ G +
Sbjct: 224 RNNCGQL--------GLNDETNRSYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGGVFT 273
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS-AAVSENGEV 249
G YGQLG G + + PR++ ITQV+CG H+ A V G V
Sbjct: 274 CGAGAYGQLGHGFSSNEML-PRMVMELMG--------STITQVACGNRHTLALVPSRGRV 324
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
Y +GLGS GQLG S +S +LP+ V+
Sbjct: 325 YAFGLGSSGQLGTRSTKS---LMLPQVVI 350
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 92/202 (45%), Gaps = 22/202 (10%)
Query: 23 IYVWGYNHSGQTGRKGRE--RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
+Y WG N GQ G P +L L G P A IACG H+ ++
Sbjct: 164 LYSWGSNIYGQLGVNSPNDLTHCNYPLRLT-TLLGIPLAA------IACGGNHSFLISKS 216
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N GQLG E R +P ++K L++ V+ ++CG + + N+G +
Sbjct: 217 GAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLT----NEGGVF 272
Query: 141 TSRLWVWGQ-----NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC-GLLQAWGYN 194
T +GQ + PR+ + I QV+CG+ H +AL G + A+G
Sbjct: 273 TCGAGAYGQLGHGFSSNEMLPRMVMELM--GSTITQVACGNRHTLALVPSRGRVYAFGLG 330
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG T + L P+V+ G
Sbjct: 331 SSGQLGTRST-KSLMLPQVVIG 351
>gi|159488564|ref|XP_001702277.1| hypothetical protein CHLREDRAFT_122886 [Chlamydomonas reinhardtii]
gi|158271254|gb|EDO97078.1| predicted protein [Chlamydomonas reinhardtii]
Length = 376
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 112/345 (32%), Positives = 162/345 (46%), Gaps = 51/345 (14%)
Query: 62 SRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC 121
+R L ++CG H+ A+ G + +WG E GQLG G + P + L V ++ C
Sbjct: 10 ARVLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHGQADQCTSPTCIAALTDAGVDAVVC 69
Query: 122 GAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------IC 170
GA T A+A R G I + W WG +F RL G F P I +
Sbjct: 70 GAEYTVAVASSR---GQIYS---WGWG-----DFGRLGHGECGDVFVPRPIAFFSGRPVA 118
Query: 171 QVSCGSVHVVALSEC-GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK 229
+V+CG H + +++ G L +G N+ GQLG G T + L P+++ A + E+
Sbjct: 119 RVACGDTHTLVVTQGDGALYTFGRNQNGQLGLGHTNDCLS-PQLVT--------ALQGER 169
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
++ V+CG HS A +E G V++WG G G LG Q P RVV LDG+ + V
Sbjct: 170 VSSVACGSEHSLAATEAGTVFSWGWGRYGNLGDGDSQ---DRYTPTRVVGLDGVTVTSVV 226
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG--- 346
CG HS +T +G ++ +G S+ GQLG G D P LV
Sbjct: 227 CGWRHSAVVTDEGRVFTFGWSKYGQLGHG-------------DHVDHTRPCLVAGLQHCR 273
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
V VA G HT+ +G ++ WG+N +GQ S P+PV
Sbjct: 274 VSTVAGGWRHTMAADSEGNLYAWGWNKFGQLGLGDSEDRAAPTPV 318
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 114/249 (45%), Gaps = 14/249 (5%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y +G N +GQ G L P+L G R +ACG EH+ A G
Sbjct: 136 ALYTFGRNQNGQLGLG------HTNDCLSPQLVTALQG--ERVSSVACGSEHSLAATEAG 187
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
T+F+WG +G LGDG + R P +V L V S+ CG +A + + T
Sbjct: 188 TVFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTSVVCGWRHSAVVTDEGRVF-TFGW 246
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGR 201
S+ G + R A + + V+ G H +A G L AWG+N++GQLG
Sbjct: 247 SKYGQLGHGDHVDHTRPCLVAGLQHCRVSTVAGGWRHTMAADSEGNLYAWGWNKFGQLGL 306
Query: 202 GITCEGLQGPRVIKGYAKFLDEAPEL----EKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
G + E P + G+ ++ ++CG H+ AV+E GEVY+WG G
Sbjct: 307 GDS-EDRAAPTPVAGFGLAGGGVEAGAATPRRVALLACGWRHTVAVTEAGEVYSWGRGVN 365
Query: 258 GQLGHCSLQ 266
GQLGH + Q
Sbjct: 366 GQLGHGAEQ 374
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 149/353 (42%), Gaps = 78/353 (22%)
Query: 3 INEIIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELF-GCPAGAN 61
++ ++ V ++ IY WG+ G+ G G + +P+ P F G P
Sbjct: 64 VDAVVCGAEYTVAVASSRGQIYSWGWGDFGRLGH-GECGDVFVPR--PIAFFSGRPVA-- 118
Query: 62 SRWLDIACGHEHTAAVAS-DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
+ACG HT V DG L+T+G N+ GQLG G P+ V LQ E V S++
Sbjct: 119 ----RVACGDTHTLVVTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGERVSSVA 174
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQ----NQGSNFPRLFWGAFTPNTII------- 169
CG+ + A E GT+ + W WG+ G + R +TP ++
Sbjct: 175 CGSEHSLAATEA----GTVFS---WGWGRYGNLGDGDSQDR-----YTPTRVVGLDGVTV 222
Query: 170 CQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK 229
V CG H +++ G + +G+++YGQLG G + + P ++ G +
Sbjct: 223 TSVVCGWRHSAVVTDEGRVFTFGWSKYGQLGHGDHVDHTR-PCLVAGLQHC--------R 273
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE------------------ 271
++ V+ G H+ A G +Y WG GQLG GD E
Sbjct: 274 VSTVAGGWRHTMAADSEGNLYAWGWNKFGQLG-----LGDSEDRAAPTPVAGFGLAGGGV 328
Query: 272 ----LLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQ 320
PRRV L ACG H+ A+T G +Y+WG GQLG G +
Sbjct: 329 EAGAATPRRVALL--------ACGWRHTVAVTEAGEVYSWGRGVNGQLGHGAE 373
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 91/195 (46%), Gaps = 16/195 (8%)
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFI 285
E ++ VSCG HS A+ + G V +WG G GQLGH D+ P + AL +
Sbjct: 8 EEARVLGVSCGSSHSIALLDCGVVASWGRGEDGQLGH---GQADQCTSPTCIAALTDAGV 64
Query: 286 KDVACGGVHSCAL-TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP 344
V CG ++ A+ +S+G +Y+WG G+LG G F P +F P
Sbjct: 65 DAVVCGAEYTVAVASSRGQIYSWGWGDFGRLGHGECGDVFVPRPI---AFFSGRP----- 116
Query: 345 NGVQLVACGHSHTLVYMR-DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLA 402
V VACG +HTLV + DG ++ +G N GQ + P V GE V +A
Sbjct: 117 --VARVACGDTHTLVVTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGERVSSVA 174
Query: 403 AGGGHSAVLADACSL 417
G HS +A ++
Sbjct: 175 CGSEHSLAATEAGTV 189
>gi|24655113|ref|NP_728591.1| CG9153, isoform A [Drosophila melanogaster]
gi|24655115|ref|NP_612098.2| CG9153, isoform B [Drosophila melanogaster]
gi|23092754|gb|AAF47474.2| CG9153, isoform A [Drosophila melanogaster]
gi|23092755|gb|AAF47475.2| CG9153, isoform B [Drosophila melanogaster]
Length = 1058
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/393 (28%), Positives = 171/393 (43%), Gaps = 84/393 (21%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG GQ G G E Q+ P Q+P P A + +ACGH HT + + G
Sbjct: 7 LYCWGSTSHGQLGLGGIEDEQILTPSQIP----WTPDTAVQQ---VACGHRHTLFLTATG 59
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
++ G+N++ QLG R P + +LQ
Sbjct: 60 KVYACGSNDYSQLGHDLPTKR--PLLIPELQ----------------------------- 88
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGR 201
+ +I Q+ CGS H +ALS+ G + +WG N+ GQLG
Sbjct: 89 ------------------------DYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGH 124
Query: 202 GITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG 261
E +Q P+V++ + + Q++CG HS A++ GE+Y+WG GQLG
Sbjct: 125 ATDKEIVQLPKVVRQLVT--------KTVVQIACGNNHSLALTSCGELYSWGSNIYGQLG 176
Query: 262 HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQT 321
S P R+ L GI + +ACGG HS ++ GA++ WG + GQLGL +T
Sbjct: 177 VNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDET 236
Query: 322 -RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANE 380
RS+ P + T R + GV+ VACG ++ +G + G +YGQ +
Sbjct: 237 NRSY---PTQLKT-LRTL-------GVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHG 285
Query: 381 KSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
S+ P V +G + ++A G H+ L
Sbjct: 286 FSSNEMLPRMVMELMGSTITQVACGNRHTLALV 318
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 140/313 (44%), Gaps = 44/313 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y G N Q G +P + P P + + I CG H+ A
Sbjct: 55 LTATGKVYACGSNDYSQLGHD-------LPTKRP---LLIPELQDYVIIQICCGSRHSLA 104
Query: 77 VASDGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
++ G + +WG N+ GQLG T+ E + P+ V+QL ++ V I+CG + + A+
Sbjct: 105 LSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALT----- 159
Query: 136 DGTISTSRLWVWGQN----QGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSE 184
S L+ WG N G N P P + + ++CG H +S+
Sbjct: 160 ----SCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISK 215
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G + WG N GQLG + Y L L + V+CG+ S ++
Sbjct: 216 SGAVFGWGRNNCGQLGL--------NDETNRSYPTQLKTLRTL-GVRFVACGDEFSVFLT 266
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGA 303
G V+T G G+ GQLGH E+LPR V+ L G I VACG H+ AL S+G
Sbjct: 267 NEGGVFTCGAGAYGQLGH---GFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGR 323
Query: 304 LYAWGGSQAGQLG 316
+YA+G +GQLG
Sbjct: 324 VYAFGLGSSGQLG 336
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 121/269 (44%), Gaps = 42/269 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+ WG N GQ G + +++PK + + + IACG+ H+ A+ S G
Sbjct: 111 VLSWGDNDCGQLGHATDKEIVQLPKVVRQLV-------TKTVVQIACGNNHSLALTSCGE 163
Query: 83 LFTWGANEFGQLGDGTEEGRKH---PEKVKQLQSEFVKSISCGAHCTAAIAEP------- 132
L++WG+N +GQLG + H P ++ L + +I+CG + + I++
Sbjct: 164 LYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWG 223
Query: 133 RENDGTISTSRLWVWGQNQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
R N G + G N +N +P T V+CG V L+ G +
Sbjct: 224 RNNCGQL--------GLNDETNRSYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGGVFT 273
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS-AAVSENGEV 249
G YGQLG G + + PR++ ITQV+CG H+ A V G V
Sbjct: 274 CGAGAYGQLGHGFSSNEML-PRMVMELMG--------STITQVACGNRHTLALVPSRGRV 324
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
Y +GLGS GQLG S +S +LP+ V+
Sbjct: 325 YAFGLGSSGQLGTRSTKS---LMLPQVVI 350
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 92/202 (45%), Gaps = 22/202 (10%)
Query: 23 IYVWGYNHSGQTGRKGRE--RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
+Y WG N GQ G P +L L G P A IACG H+ ++
Sbjct: 164 LYSWGSNIYGQLGVNSPNDLTHCNYPLRLT-TLLGIPLAA------IACGGNHSFLISKS 216
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N GQLG E R +P ++K L++ V+ ++CG + + N+G +
Sbjct: 217 GAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLT----NEGGVF 272
Query: 141 TSRLWVWGQ-----NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC-GLLQAWGYN 194
T +GQ + PR+ + I QV+CG+ H +AL G + A+G
Sbjct: 273 TCGAGAYGQLGHGFSSNEMLPRMVMELM--GSTITQVACGNRHTLALVPSRGRVYAFGLG 330
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG T + L P+V+ G
Sbjct: 331 SSGQLGTRST-KSLMLPQVVIG 351
>gi|426364914|ref|XP_004049536.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Gorilla gorilla gorilla]
Length = 979
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 159/341 (46%), Gaps = 62/341 (18%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N R D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKRIRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLVGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKG--------------------------------------------YA 218
C+ P+++K Y
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV 232
Query: 219 KFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
L ++ +KI + CGE H+AA+++ G V+T+G G GQLGH S E+ PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH---NSTSHEINPRKVF 289
Query: 279 ALDGIFIKDVACGGVHSCALT-SKGALYAWGGSQAGQLGLG 318
L G + ++ACG H+ A S G +Y++G GQLG G
Sbjct: 290 ELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ ++ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGTDCKKQTS-----PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFV 310
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 126/256 (49%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLVGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG GT+ + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +T+++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTEIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GTDCKKQTSPQLLKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYN 194
T +GQ N S+ PR + +I+ +++CG H A + G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTEIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|218782845|ref|YP_002434163.1| chromosome condensation regulator RCC1 [Desulfatibacillum
alkenivorans AK-01]
gi|218764229|gb|ACL06695.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
alkenivorans AK-01]
Length = 437
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 173/387 (44%), Gaps = 57/387 (14%)
Query: 23 IYVWGYNHSGQTG---RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
++ WG N SGQ G K +R+ + L G L +A G H+ A+ +
Sbjct: 76 VWAWGDNSSGQLGIGTNKASLSPVRVMHKSGAPLNGV--------LKVAAGERHSLALTA 127
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI---SCGAHCTAAIAEPREND 136
G ++TWG N GQLGDG R+ P KV+ +++ +++I +CG + A+A +D
Sbjct: 128 KGEVWTWGDNSKGQLGDGFFYERRSPVKVRHIRTNPLENIVGAACGGKHSLAVA----SD 183
Query: 137 GTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
GT+ W WG N PR P + V+ G H +ALS G
Sbjct: 184 GTV-----WAWGSNSDGQIGDGTLKNRQNPRQVMRFGKPLAGVKAVAAGFAHSLALSVDG 238
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ AWG NE+GQLG + +V+ + LD + ++ G S A++ +
Sbjct: 239 TVWAWGDNEFGQLGDCSDYDRKAPVQVMHSVDRPLDN------VVAIAAGRAFSLALTRD 292
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV---ACGGVHSCALTSKGA 303
GEV+ WG VGQLG ++ LP R A +G+ +K V G HS AL + G+
Sbjct: 293 GEVWAWGNNGVGQLGMGPHNGFVRDPLPVR--AANGVPLKGVRAITANGRHSLALMNDGS 350
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 363
+ AWG GQLG G Q N D P L + V +A G H+L +
Sbjct: 351 VLAWGAGDRGQLGQGAQ--------NHEDH-----PTLASLHSVICLAAGRYHSLAVAEN 397
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSP 390
G + WG N GQ K+ ++ P
Sbjct: 398 GAVLAWGDNQKGQLGIGKADKNFHALP 424
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 153/328 (46%), Gaps = 38/328 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ AK ++ WG N GQ G ++ P ++ + ACG +H+ A
Sbjct: 125 LTAKGEVWTWGDNSKGQLGDG-----FFYERRSPVKVRHIRTNPLENIVGAACGGKHSLA 179
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF--VKSISCGAHCTAAIAEPRE 134
VASDGT++ WG+N GQ+GDGT + R++P +V + VK+++ G + A++
Sbjct: 180 VASDGTVWAWGSNSDGQIGDGTLKNRQNPRQVMRFGKPLAGVKAVAAGFAHSLALSV--- 236
Query: 135 NDGTISTSRLWVWGQNQG------SNFPR-----LFWGAFTPNTIICQVSCGSVHVVALS 183
DGT+ W WG N+ S++ R + P + ++ G +AL+
Sbjct: 237 -DGTV-----WAWGDNEFGQLGDCSDYDRKAPVQVMHSVDRPLDNVVAIAAGRAFSLALT 290
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
G + AWG N GQLG G ++ P ++ L+ + ++ HS A+
Sbjct: 291 RDGEVWAWGNNGVGQLGMGPHNGFVRDPLPVRAA-----NGVPLKGVRAITANGRHSLAL 345
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+G V WG G GQLG + D L +L + +A G HS A+ GA
Sbjct: 346 MNDGSVLAWGAGDRGQLGQGAQNHEDHPTL----ASLHSVIC--LAAGRYHSLAVAENGA 399
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNES 331
+ AWG +Q GQLG+G ++F +P ++
Sbjct: 400 VLAWGDNQKGQLGIGKADKNFHALPEKT 427
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 162/368 (44%), Gaps = 46/368 (12%)
Query: 64 WLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA 123
W A G H+ V +DGT++ WG N GQLG GT + P +V + +
Sbjct: 57 WGIAAGGGYHSLVVKNDGTVWAWGDNSSGQLGIGTNKASLSPVRVMHKSGAPLNGV---- 112
Query: 124 HCTAAIAEPRENDGTISTSRLWVWGQN-QGSNFPRLFWGAFTPNTI----------ICQV 172
A R + + +W WG N +G F+ +P + I
Sbjct: 113 --LKVAAGERHSLALTAKGEVWTWGDNSKGQLGDGFFYERRSPVKVRHIRTNPLENIVGA 170
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
+CG H +A++ G + AWG N GQ+G G T + Q PR + + K L +
Sbjct: 171 ACGGKHSLAVASDGTVWAWGSNSDGQIGDG-TLKNRQNPRQVMRFGK------PLAGVKA 223
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF--IKDVAC 290
V+ G HS A+S +G V+ WG GQLG CS D++ + + ++D + +A
Sbjct: 224 VAAGFAHSLALSVDGTVWAWGDNEFGQLGDCS--DYDRKAPVQVMHSVDRPLDNVVAIAA 281
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRN-IPILV---VP-N 345
G S ALT G ++AWG + GQLG+GP + + R+ +P+ VP
Sbjct: 282 GRAFSLALTRDGEVWAWGNNGVGQLGMGPH-----------NGFVRDPLPVRAANGVPLK 330
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGG 405
GV+ + H+L M DG + WG GQ + +P+ + V LAAG
Sbjct: 331 GVRAITANGRHSLALMNDGSVLAWGAGDRGQLGQGAQNHEDHPTLA--SLHSVICLAAGR 388
Query: 406 GHSAVLAD 413
HS +A+
Sbjct: 389 YHSLAVAE 396
>gi|159038541|ref|YP_001537794.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
gi|157917376|gb|ABV98803.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
Length = 561
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 125/412 (30%), Positives = 165/412 (40%), Gaps = 62/412 (15%)
Query: 26 WGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG N Q G R + LP A++ +A G H+ AV S GT+
Sbjct: 65 WGDNAESQLGDGTTTNRSTPVTVDLP---------ADTTITAVAAGQGHSLAVTSAGTVL 115
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRL 144
WGAN GQLGDGT R P V + G TA A R + ST +
Sbjct: 116 AWGANSSGQLGDGTTTPRSTPVAVD---------LPAGTTVTAVAAGDRHSLAVTSTGTV 166
Query: 145 WVWGQNQGSNFPRLFWGAFTPN------------TIICQVSCGSVHVVALSECGLLQAWG 192
WG N +L+ G T N T + V+ G+ H +AL+ G + AWG
Sbjct: 167 LAWGLNVTG---QLYDGTTTTNSSTPIVVDLPAGTTVTAVAAGNAHSLALTSAGTVLAWG 223
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
N GQLG G T PR +D T + HS AV+ G + W
Sbjct: 224 ANSSGQLGDGTTT-----PRSTP---VAVDLPAGTTISTIAASSSSHSLAVTSTGTMLAW 275
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G GQLG ++ P V G + VA G HS A+TS G + AWGG+ +
Sbjct: 276 GANFTGQLGDGTIT---NRSTPVAVDLPAGTTVTAVATGSGHSLAVTSTGTMLAWGGNGS 332
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNG--VQLVACGHSHTLVYMRDGRIHGW 369
GQLG G T S + P+ V +P G V VA G H+L G + W
Sbjct: 333 GQLGDGSTTSS-------------STPVAVDLPAGTTVTAVAGGAGHSLALTSTGTMLAW 379
Query: 370 GYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGG-HSAVLADACSLKEL 420
G+N+ GQ + ++ P D AGG HS + + S L
Sbjct: 380 GFNTSGQLGDGTTSNRSTPIATDLPADTTITAIAGGSFHSLAVVPSASTTTL 431
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 110/360 (30%), Positives = 145/360 (40%), Gaps = 54/360 (15%)
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
AA GT WG N QLGDGT R P V + +++ G + A+
Sbjct: 54 AAAGPPGTGLAWGDNAESQLGDGTTTNRSTPVTVDLPADTTITAVAAGQGHSLAV----- 108
Query: 135 NDGTISTSRLWVWGQNQ------GSNFPRLFWGA--FTPNTIICQVSCGSVHVVALSECG 186
S + WG N G+ PR A T + V+ G H +A++ G
Sbjct: 109 ----TSAGTVLAWGANSSGQLGDGTTTPRSTPVAVDLPAGTTVTAVAAGDRHSLAVTSTG 164
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ AWG N GQL G T P V+ + P +T V+ G HS A++
Sbjct: 165 TVLAWGLNVTGQLYDGTTTTNSSTPIVV--------DLPAGTTVTAVAAGNAHSLALTSA 216
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALD----GIFIKDVACGGVHSCALTSK 301
G V WG S GQL GD PR VA+D A HS A+TS
Sbjct: 217 GTVLAWGANSSGQL-------GDGTTTPRSTPVAVDLPAGTTISTIAASSSSHSLAVTST 269
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNG--VQLVACGHSHTL 358
G + AWG + GQLG G T R+ P+ V +P G V VA G H+L
Sbjct: 270 GTMLAWGANFTGQLGDGTITN-------------RSTPVAVDLPAGTTVTAVATGSGHSL 316
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
G + WG N GQ + +T + P VD G V +A G GHS L ++
Sbjct: 317 AVTSTGTMLAWGGNGSGQLGDGSTTSSSTPVAVDLPAGTTVTAVAGGAGHSLALTSTGTM 376
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 131/334 (39%), Gaps = 53/334 (15%)
Query: 23 IYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+ WG N SGQ G R + LP A + +A G H+ AV S G
Sbjct: 114 VLAWGANSSGQLGDGTTTPRSTPVAVDLP---------AGTTVTAVAAGDRHSLAVTSTG 164
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
T+ WG N GQL DGT + V + G TA A + S
Sbjct: 165 TVLAWGLNVTGQLYDGTTTTNS--------STPIVVDLPAGTTVTAVAAGNAHSLALTSA 216
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGS------------VHVVALSECGLLQ 189
+ WG N +L G TP + V + H +A++ G +
Sbjct: 217 GTVLAWGANSSG---QLGDGTTTPRSTPVAVDLPAGTTISTIAASSSSHSLAVTSTGTML 273
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
AWG N GQLG G T P + + P +T V+ G HS AV+ G +
Sbjct: 274 AWGANFTGQLGDG-TITNRSTPVAV--------DLPAGTTVTAVATGSGHSLAVTSTGTM 324
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALD---GIFIKDVACGGVHSCALTSKGALYA 306
WG GQLG S S VA+D G + VA G HS ALTS G + A
Sbjct: 325 LAWGGNGSGQLGDGSTTSSSTP------VAVDLPAGTTVTAVAGGAGHSLALTSTGTMLA 378
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNE--SDTYFRNI 338
WG + +GQLG G + + I + +DT I
Sbjct: 379 WGFNTSGQLGDGTTSNRSTPIATDLPADTTITAI 412
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 55/139 (39%), Gaps = 11/139 (7%)
Query: 271 ELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNE 330
L+ V+ + + V GV S A G AWG + QLG G T N
Sbjct: 29 PLMVAIVLGVTSVGAAPVLAQGVPSAAAGPPGTGLAWGDNAESQLGDGTTT-------NR 81
Query: 331 SDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSP 390
S ++P + VA G H+L G + WG NS GQ + +T P
Sbjct: 82 STPVTVDLPADTT---ITAVAAGQGHSLAVTSAGTVLAWGANSSGQLGDGTTTPRSTPVA 138
Query: 391 VDWCVG-EVRKLAAGGGHS 408
VD G V +AAG HS
Sbjct: 139 VDLPAGTTVTAVAAGDRHS 157
>gi|115458498|ref|NP_001052849.1| Os04g0435700 [Oryza sativa Japonica Group]
gi|32487442|emb|CAE02741.1| OSJNBa0006B20.1 [Oryza sativa Japonica Group]
gi|113564420|dbj|BAF14763.1| Os04g0435700 [Oryza sativa Japonica Group]
gi|125548381|gb|EAY94203.1| hypothetical protein OsI_15977 [Oryza sativa Indica Group]
gi|125590466|gb|EAZ30816.1| hypothetical protein OsJ_14886 [Oryza sativa Japonica Group]
gi|215704772|dbj|BAG94800.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 453
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/323 (30%), Positives = 162/323 (50%), Gaps = 46/323 (14%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF--VKSISCGAH 124
++ G H+ A+ + L +WG E GQLG G E R P + + + S+ CGA
Sbjct: 27 VSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPGITSVICGAD 86
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVS 173
T A +E + W WG +F RL G FTP + I Q++
Sbjct: 87 HTTAYSEDEQQ------VYSWGWG-----DFGRLGHGNSSDVFTPQPVKALQGIKIKQIA 135
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
CG H +A++ G +Q+WG N+ GQLG G T + L P+ I+ + + +
Sbjct: 136 CGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLL-PQKIQSFEGVC--------VKMI 186
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
+ G H+AAV+E+G++Y WG G G LG L + L+P +V +++G + +ACG
Sbjct: 187 AAGAEHTAAVTEDGDLYGWGWGRYGNLG---LGDRNDRLVPEKVSSVEGEKMVLIACGWR 243
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG 353
H+ ++S G+LY +G S+ GQLG G L+P++ + + + + ++ G
Sbjct: 244 HTITVSSSGSLYTYGWSKYGQLGHG--DFEDHLVPHKLEA--------LKDSSISQISGG 293
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQ 376
HT+ DG+++GWG+N +GQ
Sbjct: 294 WRHTMALTSDGKLYGWGWNKFGQ 316
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 166/371 (44%), Gaps = 54/371 (14%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A + + WG GQ G E +L +P L G A A + CG +HT A +
Sbjct: 39 AGNVLCSWGRGEDGQLGHGDAEDRL-----VPTVLSGFDAAAPGI-TSVICGADHTTAYS 92
Query: 79 SD-GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPREND 136
D +++WG +FG+LG G P+ VK LQ +K I+CG +HC A
Sbjct: 93 EDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGIKIKQIACGDSHCLAVTMA----- 147
Query: 137 GTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTIIC--QVSCGSVHVVALSECGLL 188
G + + WG+NQ G+ L +C ++ G+ H A++E G L
Sbjct: 148 GEVQS-----WGRNQNGQLGLGTTEDSLLPQKIQSFEGVCVKMIAAGAEHTAAVTEDGDL 202
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG+ YG LG G + L +V + E EK+ ++CG H+ VS +G
Sbjct: 203 YGWGWGRYGNLGLGDRNDRLVPEKV---------SSVEGEKMVLIACGWRHTITVSSSGS 253
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
+YT+G GQLGH + L+P ++ AL I ++ G H+ ALTS G LY WG
Sbjct: 254 LYTYGWSKYGQLGHGDFED---HLVPHKLEALKDSSISQISGGWRHTMALTSDGKLYGWG 310
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDGR 365
++ GQ+G+G DT P+ V V VACG HTL +
Sbjct: 311 WNKFGQVGVG-------------DTDDHCFPVQVKFPEDQKVAQVACGWRHTLAFTEKKN 357
Query: 366 IHGWGYNSYGQ 376
+ WG + GQ
Sbjct: 358 VFSWGRGTSGQ 368
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 150/331 (45%), Gaps = 56/331 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG+ G+ G G + P+ + A + IACG H AV G
Sbjct: 98 VYSWGWGDFGRLGH-GNSSDVFTPQPVK-------ALQGIKIKQIACGDSHCLAVTMAGE 149
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ +WG N+ GQLG GT E P+K++ + VK I+ GA TAA+ E DG +
Sbjct: 150 VQSWGRNQNGQLGLGTTEDSLLPQKIQSFEGVCVKMIAAGAEHTAAVTE----DGDLYG- 204
Query: 143 RLWVWGQ----NQGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
W WG+ G RL P + + ++CG H + +S G L +
Sbjct: 205 --WGWGRYGNLGLGDRNDRL-----VPEKVSSVEGEKMVLIACGWRHTITVSSSGSLYTY 257
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G+++YGQLG G + L ++ EA + I+Q+S G H+ A++ +G++Y
Sbjct: 258 GWSKYGQLGHGDFEDHLVPHKL---------EALKDSSISQISGGWRHTMALTSDGKLYG 308
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG GQ+G + D P +V + + VACG H+ A T K +++WG
Sbjct: 309 WGWNKFGQVG---VGDTDDHCFPVQVKFPEDQKVAQVACGWRHTLAFTEKKNVFSWGRGT 365
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
+GQLG G + RN P+++
Sbjct: 366 SGQLGHG-------------EIVDRNKPVMI 383
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 125/255 (49%), Gaps = 22/255 (8%)
Query: 165 PNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
P + VS G+ H VAL +L +WG E GQLG G + L P V+ G F A
Sbjct: 20 PPPAVVLVSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLV-PTVLSG---FDAAA 75
Query: 225 PELEKITQVSCGEYHSAAVSEN-GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
P IT V CG H+ A SE+ +VY+WG G G+LGH + P+ V AL GI
Sbjct: 76 P---GITSVICGADHTTAYSEDEQQVYSWGWGDFGRLGHGN---SSDVFTPQPVKALQGI 129
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
IK +ACG H A+T G + +WG +Q GQLGLG T SL+P + + F +
Sbjct: 130 KIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLG--TTEDSLLPQKIQS-FEGVC---- 182
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 403
V+++A G HT DG ++GWG+ YG P V GE L A
Sbjct: 183 ---VKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVEGEKMVLIA 239
Query: 404 -GGGHSAVLADACSL 417
G H+ ++ + SL
Sbjct: 240 CGWRHTITVSSSGSL 254
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 41/99 (41%), Gaps = 10/99 (10%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLP-PELFGCPAGANSRWLDIACGHEHTA 75
+ + +Y WG+N GQ G G P Q+ PE + + +ACG HT
Sbjct: 300 LTSDGKLYGWGWNKFGQVG-VGDTDDHCFPVQVKFPE--------DQKVAQVACGWRHTL 350
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSE 114
A +F+WG GQLG G R P + L +
Sbjct: 351 AFTEKKNVFSWGRGTSGQLGHGEIVDRNKPVMIDALSPD 389
>gi|310819121|ref|YP_003951479.1| regulator of chromosome condensation-like protein [Stigmatella
aurantiaca DW4/3-1]
gi|309392193|gb|ADO69652.1| regulator of chromosome condensation-like protein [Stigmatella
aurantiaca DW4/3-1]
Length = 732
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 128/400 (32%), Positives = 176/400 (44%), Gaps = 68/400 (17%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + ++ WG N GQ G L P + G G +A G H+
Sbjct: 297 VRSDGTVWAWGQNTRGQLGDGSMTASLT-----PVQAIGLSEGEA-----VAAGETHSLV 346
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPREN 135
SDGT++ WG N GQ GDG+ + P +V L F +++ G AH A +
Sbjct: 347 ARSDGTVWAWGNNIEGQRGDGSAKTSTAPVQVTALSGGF--TVAAGKAHALAV-----RS 399
Query: 136 DGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVS---------CGSVHVVALSECG 186
DGT+ W WGQN F +L G T QV+ G H + L G
Sbjct: 400 DGTV-----WAWGQNL---FGQLGDGTRMQRTAPVQVTGLSGGVAVAAGDDHSLGLCLDG 451
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ AWG N GQLG G T Q P + + EL + V+ G HS AVS +
Sbjct: 452 TVWAWGQNTSGQLGDGTTA---QRPAPV--------QVTELSGVVAVAAGTSHSLAVSSD 500
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
G V+ WG + GQLG + ++ L P +V L G+ VA G HS A+ S G ++A
Sbjct: 501 GTVWAWGSNASGQLGDGTTRA---RLTPVQVAGLSGVVA--VAAGYFHSLAVRSDGTVWA 555
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDG 364
WG + QLG G T+ R P+ V + GV A G+ H+LV DG
Sbjct: 556 WGNNSFFQLGDGTNTQ-------------RPTPVRVPGLSGGVA-AAAGYFHSLVLRSDG 601
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAG 404
+ GWG N+YGQ N + ++ P V G V +AAG
Sbjct: 602 TVWGWGNNAYGQLGNGTANASFSPVQVTGLSGGV-AVAAG 640
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 130/413 (31%), Positives = 185/413 (44%), Gaps = 71/413 (17%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + ++ WG+N GQ G G R+ +P Q+ G G + +A G H+ A
Sbjct: 147 VRSDGTVWAWGWNSDGQLG-DGTTRERHVPVQVA----GLSGG-----VKVAAGDGHSLA 196
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V DGT++ WG N+ GQLGDGT R P +V L V +++ G+ + A+ +D
Sbjct: 197 VCLDGTVWAWGRNDSGQLGDGTTVQRSAPVQVAGLSG--VVAVAAGSSHSLAV----RSD 250
Query: 137 GTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTII-----CQVSCGSVHVVALSEC 185
GT+ W WG+N G+ RL TP + V+ G H +A+
Sbjct: 251 GTV-----WAWGRNSDGQLGDGTTSARL-----TPVQVTGLSGGVAVAAGMFHSLAVRSD 300
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + AWG N GQLG G L + I L + V+ GE HS
Sbjct: 301 GTVWAWGQNTRGQLGDGSMTASLTPVQAIG-----------LSEGEAVAAGETHSLVARS 349
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G V+ WG GQ G S ++ P +V AL G F VA G H+ A+ S G ++
Sbjct: 350 DGTVWAWGNNIEGQRGDGSAKT---STAPVQVTALSGGFT--VAAGKAHALAVRSDGTVW 404
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDG 364
AWG + GQLG G + + R P+ V +G VA G H+L DG
Sbjct: 405 AWGQNLFGQLGDGTRMQ-------------RTAPVQVTGLSGGVAVAAGDDHSLGLCLDG 451
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHS-AVLADAC 415
+ WG N+ GQ + T A P+PV + V +AAG HS AV +D
Sbjct: 452 TVWAWGQNTSGQLGD--GTTAQRPAPVQVTELSGVVAVAAGTSHSLAVSSDGT 502
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 126/393 (32%), Positives = 167/393 (42%), Gaps = 58/393 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G G + P Q+ G +A G H AV SDGT
Sbjct: 353 VWAWGNNIEGQRG-DGSAKTSTAPVQVTALSGG---------FTVAAGKAHALAVRSDGT 402
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG N FGQLGDGT R P +V L +++ G + + DGT+
Sbjct: 403 VWAWGQNLFGQLGDGTRMQRTAPVQVTGLSGGV--AVAAGDDHSLGLCL----DGTV--- 453
Query: 143 RLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
W WGQN G+ R T + + V+ G+ H +A+S G + AWG N
Sbjct: 454 --WAWGQNTSGQLGDGTTAQRPAPVQVTELSGVVAVAAGTSHSLAVSSDGTVWAWGSNAS 511
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG G T L P + G L + V+ G +HS AV +G V+ WG S
Sbjct: 512 GQLGDGTTRARLT-PVQVAG----------LSGVVAVAAGYFHSLAVRSDGTVWAWGNNS 560
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
QLG + + P RV L G A G HS L S G ++ WG + GQLG
Sbjct: 561 FFQLGDGT---NTQRPTPVRVPGLSGGVAA--AAGYFHSLVLRSDGTVWGWGNNAYGQLG 615
Query: 317 LGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
G SFS P+ V +G VA G +L DG + WG N YG
Sbjct: 616 NGTANASFS-------------PVQVTGLSGGVAVAAGDFQSLAVRSDGTVRAWGDNIYG 662
Query: 376 QAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
Q + T P V+ G + +AAG G S
Sbjct: 663 QLGDGTVTTRLAPVGVNGLSGGM-AVAAGNGFS 694
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 125/405 (30%), Positives = 179/405 (44%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ G N SGQ G G + R+P Q+ S + +A G H+ A+ SDGT
Sbjct: 53 VWAAGSNTSGQLG-DGTTSERRVPAQVV---------GLSDAVLVAAGSSHSLAIRSDGT 102
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ WG N G+LGDGT R P +V L ++++ G + + +DGT+
Sbjct: 103 AWAWGHNGSGELGDGTTFRRTRPVQVTGLSE--AEAVAAGDGHSLVV----RSDGTV--- 153
Query: 143 RLWVWGQNQ------GSNFPRLFWGAFTPNTII-----CQVSCGSVHVVALSECGLLQAW 191
W WG N G+ R P + +V+ G H +A+ G + AW
Sbjct: 154 --WAWGWNSDGQLGDGTTRER-----HVPVQVAGLSGGVKVAAGDGHSLAVCLDGTVWAW 206
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G N+ GQLG G T + P + G L + V+ G HS AV +G V+
Sbjct: 207 GRNDSGQLGDGTTVQ-RSAPVQVAG----------LSGVVAVAAGSSHSLAVRSDGTVWA 255
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG S GQLG + + L P +V L G VA G HS A+ S G ++AWG +
Sbjct: 256 WGRNSDGQLGDGTTSA---RLTPVQVTGLSGGVA--VAAGMFHSLAVRSDGTVWAWGQNT 310
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGY 371
GQLG G T SL P + + + G + VA G +H+LV DG + WG
Sbjct: 311 RGQLGDGSMTA--SLTP---------VQAIGLSEG-EAVAAGETHSLVARSDGTVWAWGN 358
Query: 372 NSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLADAC 415
N GQ + + + P V G +AAG H+ AV +D
Sbjct: 359 NIEGQRGDGSAKTSTAPVQVTALSGGF-TVAAGKAHALAVRSDGT 402
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 125/399 (31%), Positives = 169/399 (42%), Gaps = 58/399 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I + + WG+N SG+ G R+ R P ++ G S +A G H+
Sbjct: 97 IRSDGTAWAWGHNGSGELGDGTTFRRTR-----PVQVTGL-----SEAEAVAAGDGHSLV 146
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V SDGT++ WG N GQLGDGT R P +V L S VK + H A D
Sbjct: 147 VRSDGTVWAWGWNSDGQLGDGTTRERHVPVQVAGL-SGGVKVAAGDGHSLAVCL-----D 200
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
GT+ W WG+N G+ R + + V+ GS H +A+ G + A
Sbjct: 201 GTV-----WAWGRNDSGQLGDGTTVQRSAPVQVAGLSGVVAVAAGSSHSLAVRSDGTVWA 255
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG N GQLG G T L P + G L V+ G +HS AV +G V+
Sbjct: 256 WGRNSDGQLGDGTTSARLT-PVQVTG----------LSGGVAVAAGMFHSLAVRSDGTVW 304
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
WG + GQLG S+ + L P + + L + VA G HS S G ++AWG +
Sbjct: 305 AWGQNTRGQLGDGSMTA---SLTPVQAIGLS--EGEAVAAGETHSLVARSDGTVWAWGNN 359
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGW 369
GQ G G S + P+ V +G VA G +H L DG + W
Sbjct: 360 IEGQRGDGSAKTSTA-------------PVQVTALSGGFTVAAGKAHALAVRSDGTVWAW 406
Query: 370 GYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
G N +GQ + P V G V +AAG HS
Sbjct: 407 GQNLFGQLGDGTRMQRTAPVQVTGLSGGV-AVAAGDDHS 444
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 127/404 (31%), Positives = 173/404 (42%), Gaps = 65/404 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N SGQ G G Q P Q+ L G A +A G H+ AV SDGT
Sbjct: 203 VWAWGRNDSGQLG-DGTTVQRSAPVQVA-GLSGVVA--------VAAGSSHSLAVRSDGT 252
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG N GQLGDGT R P +V L +++ G + A+ +DGT+
Sbjct: 253 VWAWGRNSDGQLGDGTTSARLTPVQVTGLSGGV--AVAAGMFHSLAV----RSDGTV--- 303
Query: 143 RLWVWGQN-QGSNFPRLFWGAFTPNTIIC-----QVSCGSVHVVALSECGLLQAWGYNEY 196
W WGQN +G + TP I V+ G H + G + AWG N
Sbjct: 304 --WAWGQNTRGQLGDGSMTASLTPVQAIGLSEGEAVAAGETHSLVARSDGTVWAWGNNIE 361
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT---QVSCGEYHSAAVSENGEVYTWG 253
GQ G G AK ++ ++ V+ G+ H+ AV +G V+ WG
Sbjct: 362 GQRG--------------DGSAKTSTAPVQVTALSGGFTVAAGKAHALAVRSDGTVWAWG 407
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
GQLG + + P +V L G VA G HS L G ++AWG + +G
Sbjct: 408 QNLFGQLGDGTRM---QRTAPVQVTGLSGGVA--VAAGDDHSLGLCLDGTVWAWGQNTSG 462
Query: 314 QLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWGYN 372
QLG + T R P+ V +GV VA G SH+L DG + WG N
Sbjct: 463 QLG-------------DGTTAQRPAPVQVTELSGVVAVAAGTSHSLAVSSDGTVWAWGSN 509
Query: 373 SYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLADAC 415
+ GQ + + P V G V +AAG HS AV +D
Sbjct: 510 ASGQLGDGTTRARLTPVQVAGLSGVV-AVAAGYFHSLAVRSDGT 552
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 120/375 (32%), Positives = 166/375 (44%), Gaps = 46/375 (12%)
Query: 42 QLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEG 101
L I L L AGA+ +A G H+ A+ DGT++ G+N GQLGDGT
Sbjct: 12 MLGIALGLWLALGWAEAGADEGKSRLAAGGSHSLAIRPDGTVWAAGSNTSGQLGDGTTSE 71
Query: 102 RKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQN------QGSNF 155
R+ P +V L + ++ G+ + AI +DGT W WG N G+ F
Sbjct: 72 RRVPAQVVGLSDAVL--VAAGSSHSLAI----RSDGTA-----WAWGHNGSGELGDGTTF 120
Query: 156 PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIK 215
R T + V+ G H + + G + AWG+N GQLG G T E P +
Sbjct: 121 RRTRPVQVTGLSEAEAVAAGDGHSLVVRSDGTVWAWGWNSDGQLGDGTTRE-RHVPVQVA 179
Query: 216 GYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPR 275
G L +V+ G+ HS AV +G V+ WG GQLG + + P
Sbjct: 180 G----------LSGGVKVAAGDGHSLAVCLDGTVWAWGRNDSGQLGDGTTV---QRSAPV 226
Query: 276 RVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYF 335
+V L G+ VA G HS A+ S G ++AWG + GQLG G T S L P
Sbjct: 227 QVAGLSGVVA--VAAGSSHSLAVRSDGTVWAWGRNSDGQLGDG--TTSARLTP------- 275
Query: 336 RNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 395
+ + + GV VA G H+L DG + WG N+ GQ + T + P +
Sbjct: 276 --VQVTGLSGGVA-VAAGMFHSLAVRSDGTVWAWGQNTRGQLGDGSMTASLTPVQAI-GL 331
Query: 396 GEVRKLAAGGGHSAV 410
E +AAG HS V
Sbjct: 332 SEGEAVAAGETHSLV 346
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 138/305 (45%), Gaps = 49/305 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N SGQ G G Q P Q+ EL G A +A G H+ AV+SDGT
Sbjct: 453 VWAWGQNTSGQLG-DGTTAQRPAPVQVT-ELSGVVA--------VAAGTSHSLAVSSDGT 502
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG+N GQLGDGT R P +V L V +++ G + A+ +DGT+
Sbjct: 503 VWAWGSNASGQLGDGTTRARLTPVQVAGLSG--VVAVAAGYFHSLAV----RSDGTV--- 553
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQV---------SCGSVHVVALSECGLLQAWGY 193
W WG N +F +L G T +V + G H + L G + WG
Sbjct: 554 --WAWGNN---SFFQLGDGTNTQRPTPVRVPGLSGGVAAAAGYFHSLVLRSDGTVWGWGN 608
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
N YGQLG G T P + G L V+ G++ S AV +G V WG
Sbjct: 609 NAYGQLGNG-TANASFSPVQVTG----------LSGGVAVAAGDFQSLAVRSDGTVRAWG 657
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
GQLG ++ + L P V L G VA G S A+ S G L+AWG + G
Sbjct: 658 DNIYGQLGDGTVTT---RLAPVGVNGLSGGMA--VAAGNGFSLAVHSGGMLHAWGYNTDG 712
Query: 314 QLGLG 318
QLG G
Sbjct: 713 QLGHG 717
>gi|327277952|ref|XP_003223727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Anolis carolinensis]
Length = 1052
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 158/336 (47%), Gaps = 32/336 (9%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P + ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P GA I+ VSCG H + L++ G + AWG+ G
Sbjct: 57 TCGCNDLGQLGHEKSRKRPEQV-GALDAQNIVA-VSCGEAHTLTLNDKGQVYAWGFAADG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG T E + PR IK + +I QV+CG YHS A+S+ EV++WG
Sbjct: 115 QLGLPGTEEYTRVPRNIKSLSDV--------QIVQVACGYYHSLALSKGSEVFSWGQNKH 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG K+ P+ + +L GI +A GG HS ALT GA++ WG ++ GQLGL
Sbjct: 167 GQLGLG--YDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+E+D Y N+ + + ++CG HT ++G + +G YGQ
Sbjct: 225 N----------DENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQL 274
Query: 378 ANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
+ + + P V +G V ++A G H++
Sbjct: 275 GHNSTGHEINPRKVFELMGNIVTQIACGRQHTSAFV 310
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 109/351 (31%), Positives = 165/351 (47%), Gaps = 62/351 (17%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ C N D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEVVLEPRR-------CNFFLNKTVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T + + + G +
Sbjct: 57 TCGCNDLGQLGH--EKSRKRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + + PR + I QV+CG H +ALS+ + +WG N++GQLG G
Sbjct: 115 QLGLPGTEEYTRVPRNIKS--LSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLG 172
Query: 203 ITCEGLQGPRVIK-----------------------------GYAKF----LDE-----A 224
+ P++IK G KF L++
Sbjct: 173 YDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYV 232
Query: 225 PEL------EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
P L +KI +SCGE H+AA+++ G V+T+G G GQLGH S E+ PR+V
Sbjct: 233 PNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGH---NSTGHEINPRKVF 289
Query: 279 ALDGIFIKDVACGGVHSCALT-SKGALYAWGGSQAGQLGLGPQTRSFSLIP 328
L G + +ACG H+ A S G +Y++G GQLG+G + S P
Sbjct: 290 ELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSNRKSPFP 340
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 124/259 (47%), Gaps = 43/259 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG+ GQ G G E R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGFAADGQLGLPGTEEYTRVPRNI-------KSLSDVQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F+WG N+ GQLG G + + + P+ +K L F + + GAH A
Sbjct: 155 GSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFAL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I +SCG H AL++ G
Sbjct: 206 TLSGA-VFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH-SAAVSE 245
+ +G YGQLG T + +V + +TQ++CG H SA V
Sbjct: 262 GVFTFGAGGYGQLGHNSTGHEINPRKVFELMGNI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLGHCS 264
G +Y++GLG GQLG S
Sbjct: 313 TGRIYSFGLGGNGQLGMGS 331
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 94/203 (46%), Gaps = 22/203 (10%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P G IA G H+ A+
Sbjct: 156 SEVFSWGQNKHGQLGL-GYDLKKQTSPQLIKSLLGIPFG------QIAAGGAHSFALTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + ISCG TAA+ + +G +
Sbjct: 209 GAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQNQGSNF------PRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGY 193
T +GQ G N PR + I+ Q++CG H A G + ++G
Sbjct: 265 TFGAGGYGQ-LGHNSTGHEINPRKVFELM--GNIVTQIACGRQHTSAFVPSTGRIYSFGL 321
Query: 194 NEYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 322 GGNGQLGMGSTSNR-KSPFPVKG 343
>gi|147900291|ref|NP_001086738.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
[Xenopus laevis]
gi|83405253|gb|AAI10973.1| MGC81587 protein [Xenopus laevis]
Length = 897
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 161/335 (48%), Gaps = 38/335 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P + ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G ++ P GA II VSCG H +AL++ G + +WG+ +G
Sbjct: 57 TCGCNDLGQLGHDKSRKKPEQV-GALDAQ-IIVAVSCGEAHTLALNDKGQVFSWGHAAHG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
Q+G I + ++ PR IK + +I QV+CG +HS A+S+ +Y+WG
Sbjct: 115 QIGVSIAEDYIRVPRNIKSLSDI--------QIVQVACGHHHSLALSKESNIYSWGQNQY 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG S + KE PR + +L GI +A GG HS ALT GA++ WG ++ GQLGL
Sbjct: 167 GQLGLGSEKR--KESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
+T R+ P L+ + + CG HT ++G + +G Y
Sbjct: 225 NDETD-------------RSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHS 408
GQ + +++ P V +G V ++A G H+
Sbjct: 272 GQLGHNSASHEVNPRKVFELMGNIVTQIACGRQHT 306
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 113/374 (30%), Positives = 172/374 (45%), Gaps = 81/374 (21%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ I P++ C N D+ CG+ HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEVVIEPRR-------CDFFINKNVRDVGCGNRHTGFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRL 144
T G N+ GQLG ++ RK PE+V L ++ + ++SCG T A+ ND ++
Sbjct: 57 TCGCNDLGQLGH--DKSRKKPEQVGALDAQIIVAVSCGEAHTLAL-----ND----KGQV 105
Query: 145 WVWGQ--------NQGSNFPRLFWGAFTPNTI-ICQVSCGSVHVVALSECGLLQAWGYNE 195
+ WG + ++ R+ + + I I QV+CG H +ALS+ + +WG N+
Sbjct: 106 FSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQ 165
Query: 196 YGQLGRGITCEGLQGPRVIK-----------------------------GYAKF------ 220
YGQLG G PR IK G KF
Sbjct: 166 YGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLN 225
Query: 221 ---------LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
L ++ +KI + CGE H+AA+++ G V+T+G G GQLGH S E
Sbjct: 226 DETDRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGH---NSASHE 282
Query: 272 LLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYAWGGSQAGQLGLGPQT--RSFSLIP 328
+ PR+V L G + +ACG H+ A S G +Y++G GQLG+G + +S S++
Sbjct: 283 VNPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKSPSMVK 342
Query: 329 NE---SDTYFRNIP 339
+ Y R +P
Sbjct: 343 GNWLTHEDYVRRLP 356
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 107/226 (47%), Gaps = 27/226 (11%)
Query: 191 WGYNEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
WG +GQLG G I E + PR + + + V CG H+ V ++G V
Sbjct: 4 WGNASFGQLGLGGIDEEVVIEPRRCDFFIN--------KNVRDVGCGNRHTGFVLDDGTV 55
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
YT G +GQLGH + P +V ALD I V+CG H+ AL KG +++WG
Sbjct: 56 YTCGCNDLGQLGHDKSRKK-----PEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGH 110
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGW 369
+ GQ+G+ + +P RNI L VQ VACGH H+L ++ I+ W
Sbjct: 111 AAHGQIGVSI-AEDYIRVP-------RNIKSLSDIQIVQ-VACGHHHSLALSKESNIYSW 161
Query: 370 GYNSYGQAA--NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLA 412
G N YGQ +EK + P + G +AAGGGHS L
Sbjct: 162 GQNQYGQLGLGSEKRKES-APRHIKSLSGIPFAHIAAGGGHSFALT 206
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 120/254 (47%), Gaps = 39/254 (15%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG+ GQ G E +R+P+ + + ++ + + +ACGH H+ A++
Sbjct: 102 KGQVFSWGHAAHGQIGVSIAEDYIRVPRNIK-------SLSDIQIVQVACGHHHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKH-PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
+ +++WG N++GQLG G+E+ ++ P +K L I+ G + A+ T
Sbjct: 155 ESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFAL--------T 206
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
IS + ++ WG+N+ P L + I + CG H AL++ G +
Sbjct: 207 ISGA-IFGWGRNKFGQLGLNDETDRSDPALLKSLRSQKII--YICCGEDHTAALTKEGGV 263
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENG 247
+G YGQLG + +V + +TQ++CG H+ A V +G
Sbjct: 264 FTFGAGGYGQLGHNSASHEVNPRKVFELMGNI---------VTQIACGRQHTLAFVPSSG 314
Query: 248 EVYTWGLGSVGQLG 261
+Y++GLG GQLG
Sbjct: 315 RIYSFGLGGNGQLG 328
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 104/221 (47%), Gaps = 27/221 (12%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ +S IY WG N GQ G +R+ P+ + L G P + IA G H+ A
Sbjct: 152 LSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIK-SLSGIP------FAHIAAGGGHSFA 204
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +
Sbjct: 205 LTISGAIFGWGRNKFGQLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAALTK----E 260
Query: 137 GTISTSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQA 190
G + T +GQ N S+ PR + I+ Q++CG H +A + G + +
Sbjct: 261 GGVFTFGAGGYGQLGHNSASHEVNPRKVFELM--GNIVTQIACGRQHTLAFVPSSGRIYS 318
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKG-------YAKFLDEA 224
+G GQLG G T + P ++KG Y + L EA
Sbjct: 319 FGLGGNGQLGIGSTSNK-KSPSMVKGNWLTHEDYVRRLPEA 358
>gi|327277954|ref|XP_003223728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Anolis carolinensis]
Length = 1060
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 158/336 (47%), Gaps = 32/336 (9%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P + ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P GA I+ VSCG H + L++ G + AWG+ G
Sbjct: 57 TCGCNDLGQLGHEKSRKRPEQV-GALDAQNIVA-VSCGEAHTLTLNDKGQVYAWGFAADG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG T E + PR IK + +I QV+CG YHS A+S+ EV++WG
Sbjct: 115 QLGLPGTEEYTRVPRNIKSLSDV--------QIVQVACGYYHSLALSKGSEVFSWGQNKH 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG K+ P+ + +L GI +A GG HS ALT GA++ WG ++ GQLGL
Sbjct: 167 GQLGLG--YDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+E+D Y N+ + + ++CG HT ++G + +G YGQ
Sbjct: 225 N----------DENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQL 274
Query: 378 ANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
+ + + P V +G V ++A G H++
Sbjct: 275 GHNSTGHEINPRKVFELMGNIVTQIACGRQHTSAFV 310
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/351 (31%), Positives = 165/351 (47%), Gaps = 62/351 (17%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ C N D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEVVLEPRR-------CNFFLNKTVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T + + + G +
Sbjct: 57 TCGCNDLGQLGH--EKSRKRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + + PR + I QV+CG H +ALS+ + +WG N++GQLG G
Sbjct: 115 QLGLPGTEEYTRVPRNIKS--LSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLG 172
Query: 203 ITCEGLQGPRVIK-----------------------------GYAKF----LDE-----A 224
+ P++IK G KF L++
Sbjct: 173 YDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYV 232
Query: 225 PEL------EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
P L +KI +SCGE H+AA+++ G V+T+G G GQLGH S E+ PR+V
Sbjct: 233 PNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGH---NSTGHEINPRKVF 289
Query: 279 ALDGIFIKDVACGGVHSCALT-SKGALYAWGGSQAGQLGLGPQTRSFSLIP 328
L G + +ACG H+ A S G +Y++G GQLG+G + S P
Sbjct: 290 ELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSNRKSPFP 340
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 124/259 (47%), Gaps = 43/259 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG+ GQ G G E R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGFAADGQLGLPGTEEYTRVPRNI-------KSLSDVQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F+WG N+ GQLG G + + + P+ +K L F + + GAH A
Sbjct: 155 GSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFAL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I +SCG H AL++ G
Sbjct: 206 TLSGA-VFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH-SAAVSE 245
+ +G YGQLG T + +V + +TQ++CG H SA V
Sbjct: 262 GVFTFGAGGYGQLGHNSTGHEINPRKVFELMGNI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLGHCS 264
G +Y++GLG GQLG S
Sbjct: 313 TGRIYSFGLGGNGQLGMGS 331
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 94/203 (46%), Gaps = 22/203 (10%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P G IA G H+ A+
Sbjct: 156 SEVFSWGQNKHGQLGL-GYDLKKQTSPQLIKSLLGIPFG------QIAAGGAHSFALTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + ISCG TAA+ + +G +
Sbjct: 209 GAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQNQGSNF------PRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGY 193
T +GQ G N PR + I+ Q++CG H A G + ++G
Sbjct: 265 TFGAGGYGQ-LGHNSTGHEINPRKVFELM--GNIVTQIACGRQHTSAFVPSTGRIYSFGL 321
Query: 194 NEYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 322 GGNGQLGMGSTSNR-KSPFPVKG 343
>gi|37747571|gb|AAH60033.1| Herc4 protein [Mus musculus]
Length = 1057
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/369 (30%), Positives = 172/369 (46%), Gaps = 41/369 (11%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRR--SDFF-----VNKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + +++CG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLQGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
I C+ P++IK QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 IDCQKQTSPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQAACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA 385
+N KS +
Sbjct: 332 TSNRKSPFT 340
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 102/331 (30%), Positives = 153/331 (46%), Gaps = 37/331 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG +GQLG G EE P + ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I V+CG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVACGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGIDCQKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGEVRKLAAGG 405
GQ + +++ P V +G + AA G
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQAACG 302
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 125/256 (48%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G +G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLQGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG G + + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ +CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQAACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 94/202 (46%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + Q + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GIDCQKQTSPQLIKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q +CG H A G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQAACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|157111251|ref|XP_001651453.1| hect E3 ubiquitin ligase [Aedes aegypti]
gi|108878447|gb|EAT42672.1| AAEL005820-PA [Aedes aegypti]
Length = 1057
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 176/394 (44%), Gaps = 83/394 (21%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG G+ G G E + + LP E+ C + + + ACG HT + DG
Sbjct: 2 AVYCWGNTVHGELGLGGIEDEQVL---LPREMDWCHSSSVQQ---AACGTSHTLLLTKDG 55
Query: 82 TLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
LF+ G N+ GQLG T+ K P+ + L+
Sbjct: 56 KLFSCGNNDHGQLGHDTDCLPNKRPQFISSLE---------------------------- 87
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLG 200
N I+ VSCG+ H +AL+ G + +WG N GQLG
Sbjct: 88 -------------------------NYIVTHVSCGTTHSLALTNWGQVFSWGSNSIGQLG 122
Query: 201 RGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQL 260
+ PR+IK A + + Q++ G++HS A++ +GE+++WG GQL
Sbjct: 123 HDTDLQTYTTPRMIKTIAT--------KTVVQIASGQFHSLALTNSGELFSWGANGYGQL 174
Query: 261 GHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQ 320
G + +G+K + P V +L GI I +ACGG HS A++ GA++ WG + GQLGL
Sbjct: 175 GLGT--TGEKVVTPTLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDL 232
Query: 321 -TRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAAN 379
+R F P + T RN+ GV+ ++CG + ++G + G ++GQ +
Sbjct: 233 VSRCF---PQQLKT-LRNL-------GVRYISCGDDFSAFLTQEGGVFTCGAGTFGQLGH 281
Query: 380 EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLA 412
+ P V +G ++ ++A G H+
Sbjct: 282 GTCSNEILPRMVFELMGSKITQIACGRRHTLAFV 315
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 123/255 (48%), Gaps = 42/255 (16%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHC 125
++CG H+ A+ + G +F+WG+N GQLG T+ + P +K + ++ V I+ G
Sbjct: 94 VSCGTTHSLALTNWGQVFSWGSNSIGQLGHDTDLQTYTTPRMIKTIATKTVVQIASGQFH 153
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG-----AFTPNTI-------ICQVS 173
+ A+ ++ L+ WG N + +L G TP + I ++
Sbjct: 154 SLALT---------NSGELFSWGAN---GYGQLGLGTTGEKVVTPTLVKSLAGIPIAFIA 201
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
CG H A+S+ G + WG N +GQLG V + + + L L + +
Sbjct: 202 CGGNHSFAVSKSGAIFGWGKNTFGQLGL--------NDLVSRCFPQQLKTLRNL-GVRYI 252
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGH--CSLQSGDKELLPRRVVALDGIFIKDVACG 291
SCG+ SA +++ G V+T G G+ GQLGH CS E+LPR V L G I +ACG
Sbjct: 253 SCGDDFSAFLTQEGGVFTCGAGTFGQLGHGTCS-----NEILPRMVFELMGSKITQIACG 307
Query: 292 GVHSCALT-SKGALY 305
H+ A S+G +Y
Sbjct: 308 RRHTLAFVPSRGKIY 322
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 105/240 (43%), Gaps = 39/240 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G + P+ + A + IA G H+ A+ + G
Sbjct: 110 VFSWGSNSIGQLGHDTDLQTYTTPRMIK-------TIATKTVVQIASGQFHSLALTNSGE 162
Query: 83 LFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
LF+WGAN +GQLG GT E P VK L + I+CG + + A+++ +
Sbjct: 163 LFSWGANGYGQLGLGTTGEKVVTPTLVKSLAGIPIAFIACGGNHSFAVSK---------S 213
Query: 142 SRLWVWGQNQ----GSN------FPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
++ WG+N G N FP+ N + +SCG L++ G +
Sbjct: 214 GAIFGWGKNTFGQLGLNDLVSRCFPQQL--KTLRNLGVRYISCGDDFSAFLTQEGGVFTC 271
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEVY 250
G +GQLG G TC PR++ KITQ++CG H+ A V G++Y
Sbjct: 272 GAGTFGQLGHG-TCSNEILPRMVFELMG--------SKITQIACGRRHTLAFVPSRGKIY 322
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 50/112 (44%), Gaps = 8/112 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
AI+ WG N GQ G + P+QL R+ I+CG + +A + +G
Sbjct: 215 AIFGWGKNTFGQLGLNDLVSRC-FPQQL-----KTLRNLGVRY--ISCGDDFSAFLTQEG 266
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
+FT GA FGQLG GT P V +L + I+CG T A R
Sbjct: 267 GVFTCGAGTFGQLGHGTCSNEILPRMVFELMGSKITQIACGRRHTLAFVPSR 318
>gi|444915451|ref|ZP_21235583.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444713382|gb|ELW54282.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 746
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 128/399 (32%), Positives = 181/399 (45%), Gaps = 55/399 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+ WG N SGQ G G Q P +P L G A ++ G E++ A+ DGT
Sbjct: 66 VRAWGDNASGQLG-DGTTTQRSSPTAVP-GLAGAVA--------VSAGGEYSLALLGDGT 115
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ WG N +GQLGDGT R P V L V +I+ G + A+ DGT+
Sbjct: 116 VRAWGNNTYGQLGDGTTPHRASPGAVPGLSG--VVAIAAGNNHALALLS----DGTV--- 166
Query: 143 RLW---VWGQ-NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQ 198
R W +GQ G+ R A T + ++ G H +A+ G ++AWG N YG+
Sbjct: 167 RAWGYNAYGQLGDGTTTQRRTPVAVLGLTGVVAIAAGENHSLAVLADGTVRAWGNNTYGR 226
Query: 199 LGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVG 258
LG G T + P ++ L +T ++ G HS AV +G V WG + G
Sbjct: 227 LGDGTTTQ-RTSPVLVS----------SLTGVTAIAAGANHSLAVLADGTVRAWGYNASG 275
Query: 259 QLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLG 318
+LG + + P V L G + +++ GG HS AL + G AWG + +GQLG G
Sbjct: 276 RLGDGTTT---QRATPVAVPGLTG--VTEISAGGGHSLALLADGTARAWGSNVSGQLGDG 330
Query: 319 PQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+ R P+LV GV ++ G +H+L + DG WG N GQ
Sbjct: 331 TVSN-------------RTSPVLVSSLTGVTALSAGGNHSLALLADGTARAWGANVSGQL 377
Query: 378 ANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLADAC 415
+ +T P + G V LAAGG HS AVLA+
Sbjct: 378 GDGTTTQRTLPVGLPGLTG-VAALAAGGYHSLAVLANGT 415
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 130/405 (32%), Positives = 181/405 (44%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+ WG N GQ G G P +P L G A IA G+ H A+ SDGT
Sbjct: 116 VRAWGNNTYGQLG-DGTTPHRASPGAVP-GLSGVVA--------IAAGNNHALALLSDGT 165
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIST 141
+ WG N +GQLGDGT R+ P V L V +I+ G H A +A DGT+
Sbjct: 166 VRAWGYNAYGQLGDGTTTQRRTPVAVLGLTG--VVAIAAGENHSLAVLA-----DGTVR- 217
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPNTI---------ICQVSCGSVHVVALSECGLLQAWG 192
WG N + RL G T T + ++ G+ H +A+ G ++AWG
Sbjct: 218 ----AWGNN---TYGRLGDGTTTQRTSPVLVSSLTGVTAIAAGANHSLAVLADGTVRAWG 270
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
YN G+LG G T + P + P L +T++S G HS A+ +G W
Sbjct: 271 YNASGRLGDGTTTQRAT-PVAV----------PGLTGVTEISAGGGHSLALLADGTARAW 319
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G GQLG ++ P V +L G + ++ GG HS AL + G AWG + +
Sbjct: 320 GSNVSGQLGDGTVS---NRTSPVLVSSLTG--VTALSAGGNHSLALLADGTARAWGANVS 374
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPI-LVVPNGVQLVACGHSHTLVYMRDGRIHGWGY 371
GQLG G T+ R +P+ L GV +A G H+L + +G + WG+
Sbjct: 375 GQLGDGTTTQ-------------RTLPVGLPGLTGVAALAAGGYHSLAVLANGTVRAWGH 421
Query: 372 NSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLADAC 415
N+YGQ + + P V G V L AG HS A+L+D
Sbjct: 422 NTYGQLGDGSTAQRTAPVVVPALTGVV-SLTAGYDHSLALLSDGT 465
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 136/437 (31%), Positives = 175/437 (40%), Gaps = 89/437 (20%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+ WGYN GQ G G Q R P + L G A IA G H+ AV +DGT
Sbjct: 166 VRAWGYNAYGQLG-DGTTTQRRTPVAVL-GLTGVVA--------IAAGENHSLAVLADGT 215
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIST 141
+ WG N +G+LGDGT R P V L V +I+ GA H A +A DGT+
Sbjct: 216 VRAWGNNTYGRLGDGTTTQRTSPVLVSSLTG--VTAIAAGANHSLAVLA-----DGTVR- 267
Query: 142 SRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNE 195
WG N G+ R A T + ++S G H +AL G +AWG N
Sbjct: 268 ----AWGYNASGRLGDGTTTQRATPVAVPGLTGVTEISAGGGHSLALLADGTARAWGSNV 323
Query: 196 YGQLGRG--------ITCEGLQGPRVIKG-----YAKFLDEA------------------ 224
GQLG G + L G + A D
Sbjct: 324 SGQLGDGTVSNRTSPVLVSSLTGVTALSAGGNHSLALLADGTARAWGANVSGQLGDGTTT 383
Query: 225 --------PELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRR 276
P L + ++ G YHS AV NG V WG + GQLG S + P
Sbjct: 384 QRTLPVGLPGLTGVAALAAGGYHSLAVLANGTVRAWGHNTYGQLGDGSTA---QRTAPVV 440
Query: 277 VVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFR 336
V AL G+ + G HS AL S G + AWG + +GQLG + T R
Sbjct: 441 VPALTGVV--SLTAGYDHSLALLSDGTVRAWGNNASGQLG-------------DGTTNQR 485
Query: 337 NIPILV--VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWC 394
P+ V + N V L H L + DG + WGYN GQ + ++ W P V
Sbjct: 486 GTPVQVSGLTNVVALSGGKLYHALALLSDGTVRAWGYNMNGQLGDGSTSNRWTPVAVSGL 545
Query: 395 VGEVRKLAAGGGHSAVL 411
V +AAGG +S L
Sbjct: 546 T-NVVAIAAGGDYSLAL 561
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 120/376 (31%), Positives = 170/376 (45%), Gaps = 52/376 (13%)
Query: 48 QLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEK 107
Q P G P R + +A G H+ DGT+ WG N GQLGDGT R P
Sbjct: 36 QARPLRSGSP-----RAVRLASGKAHSLLATPDGTVRAWGDNASGQLGDGTTTQRSSPTA 90
Query: 108 VKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLW---VWGQ-NQGSNFPRLFWGAF 163
V L ++S G + A+ DGT+ R W +GQ G+ R GA
Sbjct: 91 VPGLAGAV--AVSAGGEYSLAL----LGDGTV---RAWGNNTYGQLGDGTTPHRASPGAV 141
Query: 164 TPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDE 223
+ + ++ G+ H +AL G ++AWGYN YGQLG G T + + P + G
Sbjct: 142 PGLSGVVAIAAGNNHALALLSDGTVRAWGYNAYGQLGDGTTTQ-RRTPVAVLG------- 193
Query: 224 APELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
L + ++ GE HS AV +G V WG + G+LG + + P V +L G
Sbjct: 194 ---LTGVVAIAAGENHSLAVLADGTVRAWGNNTYGRLGDGTTT---QRTSPVLVSSLTG- 246
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
+ +A G HS A+ + G + AWG + +G+LG G T+ R P+ V
Sbjct: 247 -VTAIAAGANHSLAVLADGTVRAWGYNASGRLGDGTTTQ-------------RATPV-AV 291
Query: 344 P--NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL 401
P GV ++ G H+L + DG WG N GQ + + P V G V L
Sbjct: 292 PGLTGVTEISAGGGHSLALLADGTARAWGSNVSGQLGDGTVSNRTSPVLVSSLTG-VTAL 350
Query: 402 AAGGGHS-AVLADACS 416
+AGG HS A+LAD +
Sbjct: 351 SAGGNHSLALLADGTA 366
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 124/404 (30%), Positives = 174/404 (43%), Gaps = 61/404 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A + WGYN SG+ G G Q P +P L G +I+ G H+ A
Sbjct: 260 VLADGTVRAWGYNASGRLG-DGTTTQRATPVAVP-GLTGV--------TEISAGGGHSLA 309
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPREN 135
+ +DGT WG+N GQLGDGT R P V L V ++S G H A +A+
Sbjct: 310 LLADGTARAWGSNVSGQLGDGTVSNRTSPVLVSSLTG--VTALSAGGNHSLALLAD---- 363
Query: 136 DGTISTSRLW---VWGQ-NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
T+R W V GQ G+ R T + ++ G H +A+ G ++AW
Sbjct: 364 ----GTARAWGANVSGQLGDGTTTQRTLPVGLPGLTGVAALAAGGYHSLAVLANGTVRAW 419
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G+N YGQLG G T + P V+ P L + ++ G HS A+ +G V
Sbjct: 420 GHNTYGQLGDGSTAQ-RTAPVVV----------PALTGVVSLTAGYDHSLALLSDGTVRA 468
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG---VHSCALTSKGALYAWG 308
WG + GQLG + ++ P +V L + VA G H+ AL S G + AWG
Sbjct: 469 WGNNASGQLGDGTT---NQRGTPVQVSGLTNV----VALSGGKLYHALALLSDGTVRAWG 521
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIH 367
+ GQLG + T R P+ V V +A G ++L +G +
Sbjct: 522 YNMNGQLG-------------DGSTSNRWTPVAVSGLTNVVAIAAGGDYSLALQSNGTVQ 568
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
WGY YG + TY+ P V V V +AAG H L
Sbjct: 569 SWGYGVYGPLGRDYDTYSPTPKAVP-GVTNVVAIAAGANHVLAL 611
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 164/381 (43%), Gaps = 55/381 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A + WG+N GQ G G Q P +P L G + + G++H+ A
Sbjct: 410 VLANGTVRAWGHNTYGQLG-DGSTAQRTAPVVVP-ALTGV--------VSLTAGYDHSLA 459
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ SDGT+ WG N GQLGDGT R P +V L + S H A + +D
Sbjct: 460 LLSDGTVRAWGNNASGQLGDGTTNQRGTPVQVSGLTNVVALSGGKLYHALALL-----SD 514
Query: 137 GTISTSRLWVWGQN----QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
GT+ R W + N GS R A + T + ++ G + +AL G +Q+WG
Sbjct: 515 GTV---RAWGYNMNGQLGDGSTSNRWTPVAVSGLTNVVAIAAGGDYSLALQSNGTVQSWG 571
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
Y YG LGR Y+ P + + ++ G H A+ +G VY W
Sbjct: 572 YGVYGPLGRDYDT-----------YSPTPKAVPGVTNVVAIAAGANHVLALRADGTVYAW 620
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G GQLG + + P +V L + +A G HS AL + G +YAWG + A
Sbjct: 621 GRNDFGQLGDGTTV---QRNTPVQVPGLTNVVA--IATGWDHSLALRADGTVYAWGYNYA 675
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVA--CGHSHTLVYMRDGRIHGWG 370
QLG G S +R P VP +VA G + +L + G +H WG
Sbjct: 676 RQLGDG------------STANYRQTPA-PVPGLTNVVAVTAGGNQSLALLSSGAVHAWG 722
Query: 371 YNSYGQAANEKSTYAWYPSPV 391
NS+G+ N + P+PV
Sbjct: 723 DNSHGELGNGSTLTP--PAPV 741
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 103/227 (45%), Gaps = 26/227 (11%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
+ +++ G+ HS + +G V WG + GQLG + + P V L G V
Sbjct: 46 RAVRLASGKAHSLLATPDGTVRAWGDNASGQLGDGTTT---QRSSPTAVPGLAGAVA--V 100
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLG--PQTRSFSLIPNESDTYFRNIPILVVPNG 346
+ GG +S AL G + AWG + GQLG G P S +P S G
Sbjct: 101 SAGGEYSLALLGDGTVRAWGNNTYGQLGDGTTPHRASPGAVPGLS--------------G 146
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGG 406
V +A G++H L + DG + WGYN+YGQ + +T P V G V +AAG
Sbjct: 147 VVAIAAGNNHALALLSDGTVRAWGYNAYGQLGDGTTTQRRTPVAVLGLTGVV-AIAAGEN 205
Query: 407 HS-AVLADAC--SLKELCEFRLAESVTLSNASEIEDVASRTGSEALA 450
HS AVLAD + RL + T S + V+S TG A+A
Sbjct: 206 HSLAVLADGTVRAWGNNTYGRLGDGTTTQRTSPVL-VSSLTGVTAIA 251
>gi|50418309|gb|AAH77375.1| MGC81587 protein [Xenopus laevis]
Length = 677
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 161/335 (48%), Gaps = 38/335 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P + ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G ++ P GA II VSCG H +AL++ G + +WG+ +G
Sbjct: 57 TCGCNDLGQLGHDKSRKKPEQV-GALDAQ-IIVAVSCGEAHTLALNDKGQVFSWGHAAHG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
Q+G I + ++ PR IK + +I QV+CG +HS A+S+ +Y+WG
Sbjct: 115 QIGVSIAEDYIRVPRNIKSLSDI--------QIVQVACGHHHSLALSKESNIYSWGQNQY 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG S + KE PR + +L GI +A GG HS ALT GA++ WG ++ GQLGL
Sbjct: 167 GQLGLGSEKR--KESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
+T R+ P L+ + + CG HT ++G + +G Y
Sbjct: 225 NDETD-------------RSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHS 408
GQ + +++ P V +G V ++A G H+
Sbjct: 272 GQLGHNSASHEVNPRKVFELMGNIVTQIACGRQHT 306
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 113/374 (30%), Positives = 172/374 (45%), Gaps = 81/374 (21%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ I P++ C N D+ CG+ HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEVVIEPRR-------CDFFINKNVRDVGCGNRHTGFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRL 144
T G N+ GQLG ++ RK PE+V L ++ + ++SCG T A+ ND ++
Sbjct: 57 TCGCNDLGQLGH--DKSRKKPEQVGALDAQIIVAVSCGEAHTLAL-----ND----KGQV 105
Query: 145 WVWGQ--------NQGSNFPRLFWGAFTPNTI-ICQVSCGSVHVVALSECGLLQAWGYNE 195
+ WG + ++ R+ + + I I QV+CG H +ALS+ + +WG N+
Sbjct: 106 FSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQ 165
Query: 196 YGQLGRGITCEGLQGPRVIK-----------------------------GYAKF------ 220
YGQLG G PR IK G KF
Sbjct: 166 YGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLN 225
Query: 221 ---------LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
L ++ +KI + CGE H+AA+++ G V+T+G G GQLGH S E
Sbjct: 226 DETDRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGH---NSASHE 282
Query: 272 LLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYAWGGSQAGQLGLGPQT--RSFSLIP 328
+ PR+V L G + +ACG H+ A S G +Y++G GQLG+G + +S S++
Sbjct: 283 VNPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKSPSMVK 342
Query: 329 NE---SDTYFRNIP 339
+ Y R +P
Sbjct: 343 GNWLTHEDYVRRLP 356
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 107/226 (47%), Gaps = 27/226 (11%)
Query: 191 WGYNEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
WG +GQLG G I E + PR + + + V CG H+ V ++G V
Sbjct: 4 WGNASFGQLGLGGIDEEVVIEPRRCDFFIN--------KNVRDVGCGNRHTGFVLDDGTV 55
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
YT G +GQLGH + P +V ALD I V+CG H+ AL KG +++WG
Sbjct: 56 YTCGCNDLGQLGHDKSRKK-----PEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGH 110
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGW 369
+ GQ+G+ + +P RNI L VQ VACGH H+L ++ I+ W
Sbjct: 111 AAHGQIGVSI-AEDYIRVP-------RNIKSLSDIQIVQ-VACGHHHSLALSKESNIYSW 161
Query: 370 GYNSYGQAA--NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLA 412
G N YGQ +EK + P + G +AAGGGHS L
Sbjct: 162 GQNQYGQLGLGSEKRKES-APRHIKSLSGIPFAHIAAGGGHSFALT 206
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 120/254 (47%), Gaps = 39/254 (15%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG+ GQ G E +R+P+ + + ++ + + +ACGH H+ A++
Sbjct: 102 KGQVFSWGHAAHGQIGVSIAEDYIRVPRNIK-------SLSDIQIVQVACGHHHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKH-PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
+ +++WG N++GQLG G+E+ ++ P +K L I+ G + A+ T
Sbjct: 155 ESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFAL--------T 206
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
IS + ++ WG+N+ P L + I + CG H AL++ G +
Sbjct: 207 ISGA-IFGWGRNKFGQLGLNDETDRSDPALLKSLRSQKIIY--ICCGEDHTAALTKEGGV 263
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENG 247
+G YGQLG + +V + +TQ++CG H+ A V +G
Sbjct: 264 FTFGAGGYGQLGHNSASHEVNPRKVFELMGNI---------VTQIACGRQHTLAFVPSSG 314
Query: 248 EVYTWGLGSVGQLG 261
+Y++GLG GQLG
Sbjct: 315 RIYSFGLGGNGQLG 328
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 104/221 (47%), Gaps = 27/221 (12%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ +S IY WG N GQ G +R+ P+ + L G P + IA G H+ A
Sbjct: 152 LSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIK-SLSGIP------FAHIAAGGGHSFA 204
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +
Sbjct: 205 LTISGAIFGWGRNKFGQLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAALTK----E 260
Query: 137 GTISTSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQA 190
G + T +GQ N S+ PR + I+ Q++CG H +A + G + +
Sbjct: 261 GGVFTFGAGGYGQLGHNSASHEVNPRKVFELM--GNIVTQIACGRQHTLAFVPSSGRIYS 318
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKG-------YAKFLDEA 224
+G GQLG G T + P ++KG Y + L EA
Sbjct: 319 FGLGGNGQLGIGSTSNK-KSPSMVKGNWLTHEDYVRRLPEA 358
>gi|427794767|gb|JAA62835.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
ubiquitin ligase, partial [Rhipicephalus pulchellus]
Length = 1181
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/342 (31%), Positives = 163/342 (47%), Gaps = 38/342 (11%)
Query: 83 LFTWGANEFGQLG-----DG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
L++WG G+LG DG TE PE+V++ + V+ ++CG T +
Sbjct: 53 LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLA---- 108
Query: 136 DGTISTSRLWVWGQ-NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
+G++ + +GQ Q + +L A I V+CG H +ALS+ G + +WG N
Sbjct: 109 NGSVYSCGANDFGQLGQDRSMRKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSWGCN 168
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
GQLG G E P+VIK A I Q++CG H A++ NGE+++WG
Sbjct: 169 RNGQLGCGTEEESRLRPKVIKKLATL--------HIVQIACGAVHCLALANNGELFSWGG 220
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ GQLG +G+ E LPRRV L G+ + VACG +HS LT G ++ WG + GQ
Sbjct: 221 NASGQLGLGRDSTGN-ERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQ 279
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDGRIHGWGY 371
LGL SD R P ++ P ++ V CG +HT DG + +G
Sbjct: 280 LGL-------------SDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGA 326
Query: 372 NSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
+YGQ + P V +G + +L+ G H+ A
Sbjct: 327 GTYGQLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYA 368
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 108/317 (34%), Positives = 155/317 (48%), Gaps = 53/317 (16%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A ++Y G N GQ G+ +R +R +Q+ A + +ACG H+ A++
Sbjct: 108 ANGSVYSCGANDFGQLGQ---DRSMRKLEQVA-------ALSAHEIRAVACGEAHSLALS 157
Query: 79 SDGTLFTWGANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPREND 136
G +F+WG N GQLG GT EE R P+ +K+L + + I+CGA HC A N+
Sbjct: 158 DAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLAL-----ANN 212
Query: 137 GTISTSRLWVWGQNQ------------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
G L+ WG N PR + + V+CG++H V L+
Sbjct: 213 G-----ELFSWGGNASGQLGLGRDSTGNERLPRRV--SHLVGVPLALVACGAMHSVGLTP 265
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G + WG N GQLG + L P V+K ++I V CGE H+AA++
Sbjct: 266 SGTVFVWGRNSCGQLGLSDQRDRLH-PTVLKPLRS--------QRIKHVCCGENHTAALT 316
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHSCALTSK- 301
+G V+T+G G+ GQLGH G K E +PRRVV L G I ++CG H+ A +
Sbjct: 317 ADGGVFTFGAGTYGQLGH-----GVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQS 371
Query: 302 GALYAWGGSQAGQLGLG 318
G LY +G +GQLG G
Sbjct: 372 GRLYIFGLGMSGQLGNG 388
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 177/381 (46%), Gaps = 62/381 (16%)
Query: 19 AKSAIYVWGYNHSGQTG----RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHT 74
A +Y WG +G+ G + G + + + + FG A ++ACGH+HT
Sbjct: 49 APMLLYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVR-----EVACGHKHT 103
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
+ ++G++++ GAN+FGQLG + + E+V L + +++++CG + A+++
Sbjct: 104 LVLLANGSVYSCGANDFGQLGQ--DRSMRKLEQVAALSAHEIRAVACGEAHSLALSD--- 158
Query: 135 NDGTISTSRLWVWGQNQGSNF-----------PRLFWGAFTPNTIICQVSCGSVHVVALS 183
+++ WG N+ P++ T + I Q++CG+VH +AL+
Sbjct: 159 ------AGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLH--IVQIACGAVHCLALA 210
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQG-PRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
G L +WG N GQLG G G + PR + + V+CG HS
Sbjct: 211 NNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGV--------PLALVACGAMHSVG 262
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
++ +G V+ WG S GQLG L L P + L IK V CG H+ ALT+ G
Sbjct: 263 LTPSGTVFVWGRNSCGQLG---LSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADG 319
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLV 359
++ +G GQLG G + NE+ +P VV + ++CG HT+
Sbjct: 320 GVFTFGAGTYGQLGHGVKV-------NEA------VPRRVVELMGTAISQLSCGRCHTVA 366
Query: 360 YM-RDGRIHGWGYNSYGQAAN 379
Y + GR++ +G GQ N
Sbjct: 367 YAPQSGRLYIFGLGMSGQLGN 387
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 120/256 (46%), Gaps = 36/256 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N +GQ G G E + R+ ++ +L A + IACG H A+A++G
Sbjct: 162 VFSWGCNRNGQLG-CGTEEESRLRPKVIKKL------ATLHIVQIACGAVHCLALANNGE 214
Query: 83 LFTWGANEFGQLGDGTEE--GRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
LF+WG N GQLG G + + P +V L + ++CGA + G
Sbjct: 215 LFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSV---------GLTP 265
Query: 141 TSRLWVWGQNQGSNF------PRLFWGAFTP--NTIICQVSCGSVHVVALSECGLLQAWG 192
+ ++VWG+N RL P + I V CG H AL+ G + +G
Sbjct: 266 SGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFG 325
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS-ENGEVYT 251
YGQLG G+ RV++ I+Q+SCG H+ A + ++G +Y
Sbjct: 326 AGTYGQLGHGVKVNEAVPRRVVELMGT---------AISQLSCGRCHTVAYAPQSGRLYI 376
Query: 252 WGLGSVGQLGHCSLQS 267
+GLG GQLG+ +L+S
Sbjct: 377 FGLGMSGQLGNGTLES 392
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 94/202 (46%), Gaps = 23/202 (11%)
Query: 23 IYVWGYNHSGQTGRKGRER--QLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
++ WG N SGQ G GR+ R+P+++ L G P +ACG H+ +
Sbjct: 215 LFSWGGNASGQLGL-GRDSTGNERLPRRVS-HLVGVPLAL------VACGAMHSVGLTPS 266
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
GT+F WG N GQLG + R HP +K L+S+ +K + CG + TAA+ DG +
Sbjct: 267 GTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTA----DGGVF 322
Query: 141 TSRLWVWGQ-----NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALS-ECGLLQAWGYN 194
T +GQ PR T I Q+SCG H VA + + G L +G
Sbjct: 323 TFGAGTYGQLGHGVKVNEAVPRRVVELM--GTAISQLSCGRCHTVAYAPQSGRLYIFGLG 380
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T E P + G
Sbjct: 381 MSGQLGNG-TLESSALPVTVPG 401
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 304 LYAWGGSQAGQLGL-----GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 358
LY+WG G+LGL G T + P R V+ VACGH HTL
Sbjct: 53 LYSWGLGPNGELGLTQGKDGVDTET----PVSQPERVRRFGT----RAVREVACGHKHTL 104
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADA 414
V + +G ++ G N +GQ ++S E+R +A G HS L+DA
Sbjct: 105 VLLANGSVYSCGANDFGQLGQDRSMRKL-EQVAALSAHEIRAVACGEAHSLALSDA 159
>gi|195586891|ref|XP_002083201.1| GD13608 [Drosophila simulans]
gi|194195210|gb|EDX08786.1| GD13608 [Drosophila simulans]
Length = 1058
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 172/389 (44%), Gaps = 84/389 (21%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG GQ G G E Q+ P+Q+P P A + ++CGH HT + + G
Sbjct: 7 LYCWGSTSHGQLGLGGIEDEQILTPRQIP----WTPDTAVQQ---VSCGHRHTLFLTATG 59
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
++ G+N++ QLG R P+ + +LQ
Sbjct: 60 KVYACGSNDYSQLGHDLPTKR--PQLIPELQ----------------------------- 88
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGR 201
+ +I Q+SCGS H +ALS+ G + +WG N+ GQLG
Sbjct: 89 ------------------------DYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQLGH 124
Query: 202 GITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG 261
E +Q P+V++ + + Q++CG HS A++ GE+Y+WG GQLG
Sbjct: 125 ATEKEIVQLPKVVRQLVS--------KTVVQIACGNNHSLALTSCGELYSWGSNIYGQLG 176
Query: 262 HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQT 321
S P R+ L GI + +ACGG HS ++ GA++ WG + GQLGL +T
Sbjct: 177 VNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDET 236
Query: 322 -RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANE 380
R++ P + T R + GV+ ACG ++ +G + G +YGQ +
Sbjct: 237 NRAY---PTQLKT-LRTL-------GVRFAACGDEFSVFLTNEGGVFTCGAGAYGQLGHG 285
Query: 381 KSTYAWYPSPVDWCVGE-VRKLAAGGGHS 408
S+ P V +G + ++A G H+
Sbjct: 286 FSSNEMLPRMVMELMGSTITQVACGNRHT 314
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/313 (30%), Positives = 141/313 (45%), Gaps = 44/313 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y G N Q G ++ QL PEL + + I+CG H+ A
Sbjct: 55 LTATGKVYACGSNDYSQLGHDLPTKR----PQLIPEL------QDYVIIQISCGSRHSLA 104
Query: 77 VASDGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
++ G + +WG N+ GQLG TE E + P+ V+QL S+ V I+CG + + A+
Sbjct: 105 LSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALT----- 159
Query: 136 DGTISTSRLWVWGQN----QGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSE 184
S L+ WG N G N P P + + ++CG H +S+
Sbjct: 160 ----SCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISK 215
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G + WG N GQLG + Y L L + +CG+ S ++
Sbjct: 216 SGAVFGWGRNNCGQLGL--------NDETNRAYPTQLKTLRTL-GVRFAACGDEFSVFLT 266
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGA 303
G V+T G G+ GQLGH E+LPR V+ L G I VACG H+ A S+G
Sbjct: 267 NEGGVFTCGAGAYGQLGH---GFSSNEMLPRMVMELMGSTITQVACGNRHTLAFVPSRGK 323
Query: 304 LYAWGGSQAGQLG 316
+YA+G +GQLG
Sbjct: 324 VYAFGLGSSGQLG 336
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 122/269 (45%), Gaps = 42/269 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+ WG N GQ G + +++PK + + + + IACG+ H+ A+ S G
Sbjct: 111 VLSWGDNDCGQLGHATEKEIVQLPKVVRQLV-------SKTVVQIACGNNHSLALTSCGE 163
Query: 83 LFTWGANEFGQLGDGTEEGRKH---PEKVKQLQSEFVKSISCGAHCTAAIAEP------- 132
L++WG+N +GQLG + H P ++ L + +I+CG + + I++
Sbjct: 164 LYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWG 223
Query: 133 RENDGTISTSRLWVWGQNQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
R N G + G N +N +P T +CG V L+ G +
Sbjct: 224 RNNCGQL--------GLNDETNRAYPTQLKTLRTLGVRFA--ACGDEFSVFLTNEGGVFT 273
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEV 249
G YGQLG G + + PR++ ITQV+CG H+ A V G+V
Sbjct: 274 CGAGAYGQLGHGFSSNEML-PRMVMELMG--------STITQVACGNRHTLAFVPSRGKV 324
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
Y +GLGS GQLG S +S +LP+ V+
Sbjct: 325 YAFGLGSSGQLGTRSTKS---LMLPQVVI 350
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 90/202 (44%), Gaps = 22/202 (10%)
Query: 23 IYVWGYNHSGQTGRKGRE--RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
+Y WG N GQ G P +L L G P A IACG H+ ++
Sbjct: 164 LYSWGSNIYGQLGVNSPNDLTHCNYPLRLT-TLLGIPLAA------IACGGNHSFLISKS 216
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N GQLG E R +P ++K L++ V+ +CG + + N+G +
Sbjct: 217 GAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFAACGDEFSVFLT----NEGGVF 272
Query: 141 TSRLWVWGQ-----NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC-GLLQAWGYN 194
T +GQ + PR+ + I QV+CG+ H +A G + A+G
Sbjct: 273 TCGAGAYGQLGHGFSSNEMLPRMVMELM--GSTITQVACGNRHTLAFVPSRGKVYAFGLG 330
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG T + L P+V+ G
Sbjct: 331 SSGQLGTRST-KSLMLPQVVIG 351
>gi|407003324|gb|EKE19915.1| hypothetical protein ACD_8C00086G0006 [uncultured bacterium]
Length = 2770
Score = 139 bits (351), Expect = 2e-30, Method: Composition-based stats.
Identities = 109/354 (30%), Positives = 168/354 (47%), Gaps = 44/354 (12%)
Query: 63 RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG 122
++ + G+ H A+ SDGT++ WG N +G+LGDG+ R P +V L V +IS
Sbjct: 269 KYAQVVAGYYHNLALKSDGTVWAWGYNYYGRLGDGSTINRIVPVQVSGLTE--VSAISAA 326
Query: 123 AHCTAAIAEPRENDGTISTSRLWVWG-QNQGSNFPRLFWGAFTPNTI---ICQVSCGSVH 178
+ A+ ++DGT LW WG N+G + P + + +S G +
Sbjct: 327 FGHSMAL----KSDGT-----LWTWGYNNRGQLGNNSITQSLVPVQVLTGVASISAGYDY 377
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
+A+ G + AWG N YGQ G T + L P + G + I+ S Y
Sbjct: 378 SLAVKSDGTVWAWGRNYYGQFGNNSTIDSLV-PIQVSGLTG-------VTSISATSSNNY 429
Query: 239 -HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
HS A+ +G V+ WG S GQLG+ S + L+P + + L G+ ++ G HS A
Sbjct: 430 SHSLALKSDGTVWGWGYNSTGQLGN---NSATQSLVPVQALGLTGVV--SISAGSNHSMA 484
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT 357
L S G + WGG+ GQ LG + + SL+P + +P L +GV ++ G+ H+
Sbjct: 485 LKSDGTAWIWGGNSDGQ--LGNNSTAQSLVPVQ-------VPGL---SGVSAISAGNYHS 532
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
+ DG + WG NS GQ N +T + P V + ++AG HS L
Sbjct: 533 MALKSDGTVWAWGRNSSGQLGNNSTTVSLVPIQV---LTGTTSVSAGTYHSMAL 583
Score = 132 bits (333), Expect = 3e-28, Method: Composition-based stats.
Identities = 123/419 (29%), Positives = 185/419 (44%), Gaps = 77/419 (18%)
Query: 24 YVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTL 83
++WG N GQ G + L +P Q+P L G A I+ G+ H+ A+ SDGT+
Sbjct: 492 WIWGGNSDGQLGNNSTAQSL-VPVQVP-GLSGVSA--------ISAGNYHSMALKSDGTV 541
Query: 84 FTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSR 143
+ WG N GQLG+ + P +V + S+S G + + A+ ++DG +
Sbjct: 542 WAWGRNSSGQLGNNSTTVSLVPIQVLTGTT----SVSAGTYHSMAL----KSDGAV---- 589
Query: 144 LWVWGQNQ------GSNFPRL-------------FWGAFTPNT----IICQVSCGSV-HV 179
W WG N+ +N +L F F P++ I S GS +
Sbjct: 590 -WGWGNNEYKKIISNTNLDQLVPVKTAMNAYISDFNDGFVPSSQEIKSIATSSGGSYGYS 648
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
+AL + AWGY G LG G G +++ GY +L + Q+S GE H
Sbjct: 649 LALKSDKTVWAWGYGGSGVLGNG------TGEQMLVGYP-----VRDLTGVEQISAGEGH 697
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT 299
S A+ +G + WG + G LG+ S + +P +V L G+ V G +HS AL
Sbjct: 698 SLALRSDGTAWAWGDNAYGMLGNNSTVTSS---IPVQVSGLTGV--SSVKAGRLHSMALK 752
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTL 358
S G ++AWG + GQLG G T+ R +P+ V V ++ G H++
Sbjct: 753 SDGTVWAWGYNTEGQLGDGSTTQ-------------RLVPVQVSGLEDVIAISAGDYHSM 799
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSL 417
V DG + WG NS GQ N +T + P V G A +AV +D +L
Sbjct: 800 VIKSDGTVWAWGRNSNGQLGNNSTTGSLVPVQVPGLTGVALISAGTNTSAAVKSDGTAL 858
Score = 131 bits (329), Expect = 9e-28, Method: Composition-based stats.
Identities = 112/371 (30%), Positives = 162/371 (43%), Gaps = 65/371 (17%)
Query: 16 NIPAKS--AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEH 73
N+ KS ++ WGYN+ G+ G I + +P ++ G + I+ H
Sbjct: 280 NLALKSDGTVWAWGYNYYGRLGDGS-----TINRIVPVQVSGLTEVSA-----ISAAFGH 329
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
+ A+ SDGTL+TWG N GQLG+ + P +V V SIS G + A+
Sbjct: 330 SMALKSDGTLWTWGYNNRGQLGNNSITQSLVPVQVLT----GVASISAGYDYSLAV---- 381
Query: 134 ENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALS 183
++DGT+ W WG+N F P G +I S H +AL
Sbjct: 382 KSDGTV-----WAWGRNYYGQFGNNSTIDSLVPIQVSGLTGVTSISATSSNNYSHSLALK 436
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
G + WGYN GQLG + L +A L + +S G HS A+
Sbjct: 437 SDGTVWGWGYNSTGQLGNNSATQSLVPV-----------QALGLTGVVSISAGSNHSMAL 485
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+G + WG S GQLG+ S + L+P +V L G + ++ G HS AL S G
Sbjct: 486 KSDGTAWIWGGNSDGQLGN---NSTAQSLVPVQVPGLSG--VSAISAGNYHSMALKSDGT 540
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 363
++AWG + +GQLG T S +PI V+ G V+ G H++ D
Sbjct: 541 VWAWGRNSSGQLGNNSTTVSL-------------VPIQVL-TGTTSVSAGTYHSMALKSD 586
Query: 364 GRIHGWGYNSY 374
G + GWG N Y
Sbjct: 587 GAVWGWGNNEY 597
Score = 128 bits (322), Expect = 6e-27, Method: Composition-based stats.
Identities = 117/411 (28%), Positives = 178/411 (43%), Gaps = 58/411 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + ++ WGYN+ GQ G + L +P Q+ L G + I+ G++++ A
Sbjct: 333 LKSDGTLWTWGYNNRGQLGNNSITQSL-VPVQV---LTGVAS--------ISAGYDYSLA 380
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V SDGT++ WG N +GQ G+ + P +V L V SIS + + + ++D
Sbjct: 381 VKSDGTVWAWGRNYYGQFGNNSTIDSLVPIQVSGLTG--VTSISATSSNNYSHSLALKSD 438
Query: 137 GTISTSRLWVWGQNQ----GSN------FPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
GT+ W WG N G+N P G T + +S GS H +AL G
Sbjct: 439 GTV-----WGWGYNSTGQLGNNSATQSLVPVQALGL----TGVVSISAGSNHSMALKSDG 489
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
WG N GQLG T + L +V P L ++ +S G YHS A+ +
Sbjct: 490 TAWIWGGNSDGQLGNNSTAQSLVPVQV-----------PGLSGVSAISAGNYHSMALKSD 538
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
G V+ WG S GQLG+ S L+P +V L G V+ G HS AL S GA++
Sbjct: 539 GTVWAWGRNSSGQLGN---NSTTVSLVPIQV--LTG--TTSVSAGTYHSMALKSDGAVWG 591
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS------HTLVY 360
WG ++ ++ + + Y + VP+ ++ + S ++L
Sbjct: 592 WGNNEYKKIISNTNLDQLVPVKTAMNAYISDFNDGFVPSSQEIKSIATSSGGSYGYSLAL 651
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
D + WGY G N PV G V +++AG GHS L
Sbjct: 652 KSDKTVWAWGYGGSGVLGNGTGEQMLVGYPVRDLTG-VEQISAGEGHSLAL 701
Score = 115 bits (287), Expect = 6e-23, Method: Composition-based stats.
Identities = 115/387 (29%), Positives = 161/387 (41%), Gaps = 81/387 (20%)
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
++ A+ SD T++ WG G LG+GT E V+ L V+ IS G + A+
Sbjct: 647 YSLALKSDKTVWAWGYGGSGVLGNGTGEQMLVGYPVRDLTG--VEQISAGEGHSLAL--- 701
Query: 133 RENDGTISTSRLWVWGQNQ----------GSNFPRLFWGAFTPNTIICQVSCGSVHVVAL 182
+DGT W WG N S+ P G T + V G +H +AL
Sbjct: 702 -RSDGTA-----WAWGDNAYGMLGNNSTVTSSIPVQVSGL----TGVSSVKAGRLHSMAL 751
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
G + AWGYN GQLG G T + L P + G LE + +S G+YHS
Sbjct: 752 KSDGTVWAWGYNTEGQLGDGSTTQRLV-PVQVSG----------LEDVIAISAGDYHSMV 800
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
+ +G V+ WG S GQLG+ S L+P +V L G+ + ++ G S A+ S G
Sbjct: 801 IKSDGTVWAWGRNSNGQLGN---NSTTGSLVPVQVPGLTGVAL--ISAGTNTSAAVKSDG 855
Query: 303 ALYAWGGSQAGQL------------------GLGPQT----RSFSLIPNESDTYF---RN 337
AWG + GQL G+G + S SLI T + RN
Sbjct: 856 TALAWGSNTYGQLCDGSNIQRLIPVQVSEPVGVGALSMVVANSHSLILKLDGTVWGCGRN 915
Query: 338 --------------IPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKS 382
+P+ + GV ++ G H++ DG I GWGYN YGQ + +
Sbjct: 916 DYGPIGNNSITDSKVPVQTLGLAGVVSISAGLYHSMALKSDGTIWGWGYNGYGQLGDNST 975
Query: 383 TYAWYPSPVDWCVGEVRKLAAGGGHSA 409
T P L GGG+ A
Sbjct: 976 TSRLAPVASKRWFFPDDYLNLGGGYEA 1002
Score = 93.2 bits (230), Expect = 3e-16, Method: Composition-based stats.
Identities = 92/321 (28%), Positives = 142/321 (44%), Gaps = 49/321 (15%)
Query: 24 YVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTL 83
+ WG N G G + +P ++ G G +S + G H+ A+ SDGT+
Sbjct: 708 WAWGDNAYGMLGNNST-----VTSSIPVQVSGL-TGVSS----VKAGRLHSMALKSDGTV 757
Query: 84 FTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSR 143
+ WG N GQLGDG+ R P +V L+ V +IS G + + I ++DGT+
Sbjct: 758 WAWGYNTEGQLGDGSTTQRLVPVQVSGLED--VIAISAGDYHSMVI----KSDGTV---- 807
Query: 144 LWVWGQNQ----GSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG+N G+N G+ P + + +S G+ A+ G AWG N
Sbjct: 808 -WAWGRNSNGQLGNNSTT---GSLVPVQVPGLTGVALISAGTNTSAAVKSDGTALAWGSN 863
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
YGQL C+G R+I + E + ++ V HS + +G V+ G
Sbjct: 864 TYGQL-----CDGSNIQRLIPVQ---VSEPVGVGALSMV-VANSHSLILKLDGTVWGCGR 914
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
G +G+ S+ +P + + L G+ ++ G HS AL S G ++ WG + GQ
Sbjct: 915 NDYGPIGNNSITDSK---VPVQTLGLAGVV--SISAGLYHSMALKSDGTIWGWGYNGYGQ 969
Query: 315 LGLGPQTRSFSLIPNESDTYF 335
LG T L P S +F
Sbjct: 970 LGDNSTTS--RLAPVASKRWF 988
Score = 78.2 bits (191), Expect = 9e-12, Method: Composition-based stats.
Identities = 54/169 (31%), Positives = 78/169 (46%), Gaps = 19/169 (11%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
EK QV G YH+ A+ +G V+ WG G+LG S + ++P +V L +
Sbjct: 268 EKYAQVVAGYYHNLALKSDGTVWAWGYNYYGRLGDGSTIN---RIVPVQVSGLTEVSAIS 324
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
A G HS AL S G L+ WG + GQLG T+S +P+ V+ GV
Sbjct: 325 AAFG--HSMALKSDGTLWTWGYNNRGQLGNNSITQSL-------------VPVQVL-TGV 368
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG 396
++ G+ ++L DG + WG N YGQ N + + P V G
Sbjct: 369 ASISAGYDYSLAVKSDGTVWAWGRNYYGQFGNNSTIDSLVPIQVSGLTG 417
>gi|427780149|gb|JAA55526.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
ubiquitin ligase [Rhipicephalus pulchellus]
Length = 1175
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/342 (31%), Positives = 163/342 (47%), Gaps = 38/342 (11%)
Query: 83 LFTWGANEFGQLG-----DG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
L++WG G+LG DG TE PE+V++ + V+ ++CG T +
Sbjct: 47 LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLA---- 102
Query: 136 DGTISTSRLWVWGQ-NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
+G++ + +GQ Q + +L A I V+CG H +ALS+ G + +WG N
Sbjct: 103 NGSVYSCGANDFGQLGQDRSMRKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSWGCN 162
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
GQLG G E P+VIK A I Q++CG H A++ NGE+++WG
Sbjct: 163 RNGQLGCGTEEESRLRPKVIKKLATL--------HIVQIACGAVHCLALANNGELFSWGG 214
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ GQLG +G+ E LPRRV L G+ + VACG +HS LT G ++ WG + GQ
Sbjct: 215 NASGQLGLGRDSTGN-ERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQ 273
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDGRIHGWGY 371
LGL SD R P ++ P ++ V CG +HT DG + +G
Sbjct: 274 LGL-------------SDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGA 320
Query: 372 NSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
+YGQ + P V +G + +L+ G H+ A
Sbjct: 321 GTYGQLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYA 362
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 108/317 (34%), Positives = 155/317 (48%), Gaps = 53/317 (16%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A ++Y G N GQ G+ +R +R +Q+ A + +ACG H+ A++
Sbjct: 102 ANGSVYSCGANDFGQLGQ---DRSMRKLEQVA-------ALSAHEIRAVACGEAHSLALS 151
Query: 79 SDGTLFTWGANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPREND 136
G +F+WG N GQLG GT EE R P+ +K+L + + I+CGA HC A N+
Sbjct: 152 DAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLAL-----ANN 206
Query: 137 GTISTSRLWVWGQNQ------------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
G L+ WG N PR + + V+CG++H V L+
Sbjct: 207 G-----ELFSWGGNASGQLGLGRDSTGNERLPRRV--SHLVGVPLALVACGAMHSVGLTP 259
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G + WG N GQLG + L P V+K ++I V CGE H+AA++
Sbjct: 260 SGTVFVWGRNSCGQLGLSDQRDRLH-PTVLKPLRS--------QRIKHVCCGENHTAALT 310
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHSCALTSK- 301
+G V+T+G G+ GQLGH G K E +PRRVV L G I ++CG H+ A +
Sbjct: 311 ADGGVFTFGAGTYGQLGH-----GVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQS 365
Query: 302 GALYAWGGSQAGQLGLG 318
G LY +G +GQLG G
Sbjct: 366 GRLYIFGLGMSGQLGNG 382
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 177/381 (46%), Gaps = 62/381 (16%)
Query: 19 AKSAIYVWGYNHSGQTG----RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHT 74
A +Y WG +G+ G + G + + + + FG A ++ACGH+HT
Sbjct: 43 APMLLYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVR-----EVACGHKHT 97
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
+ ++G++++ GAN+FGQLG + + E+V L + +++++CG + A+++
Sbjct: 98 LVLLANGSVYSCGANDFGQLGQ--DRSMRKLEQVAALSAHEIRAVACGEAHSLALSD--- 152
Query: 135 NDGTISTSRLWVWGQNQGSNF-----------PRLFWGAFTPNTIICQVSCGSVHVVALS 183
+++ WG N+ P++ T + I Q++CG+VH +AL+
Sbjct: 153 ------AGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLH--IVQIACGAVHCLALA 204
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQG-PRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
G L +WG N GQLG G G + PR + + V+CG HS
Sbjct: 205 NNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGV--------PLALVACGAMHSVG 256
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
++ +G V+ WG S GQLG L L P + L IK V CG H+ ALT+ G
Sbjct: 257 LTPSGTVFVWGRNSCGQLG---LSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADG 313
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLV 359
++ +G GQLG G + NE+ +P VV + ++CG HT+
Sbjct: 314 GVFTFGAGTYGQLGHGVKV-------NEA------VPRRVVELMGTAISQLSCGRCHTVA 360
Query: 360 YM-RDGRIHGWGYNSYGQAAN 379
Y + GR++ +G GQ N
Sbjct: 361 YAPQSGRLYIFGLGMSGQLGN 381
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 120/256 (46%), Gaps = 36/256 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N +GQ G G E + R+ ++ +L A + IACG H A+A++G
Sbjct: 156 VFSWGCNRNGQLG-CGTEEESRLRPKVIKKL------ATLHIVQIACGAVHCLALANNGE 208
Query: 83 LFTWGANEFGQLGDGTEE--GRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
LF+WG N GQLG G + + P +V L + ++CGA + G
Sbjct: 209 LFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSV---------GLTP 259
Query: 141 TSRLWVWGQNQGSNF------PRLFWGAFTP--NTIICQVSCGSVHVVALSECGLLQAWG 192
+ ++VWG+N RL P + I V CG H AL+ G + +G
Sbjct: 260 SGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFG 319
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS-ENGEVYT 251
YGQLG G+ RV++ I+Q+SCG H+ A + ++G +Y
Sbjct: 320 AGTYGQLGHGVKVNEAVPRRVVELMGT---------AISQLSCGRCHTVAYAPQSGRLYI 370
Query: 252 WGLGSVGQLGHCSLQS 267
+GLG GQLG+ +L+S
Sbjct: 371 FGLGMSGQLGNGTLES 386
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 94/202 (46%), Gaps = 23/202 (11%)
Query: 23 IYVWGYNHSGQTGRKGRER--QLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
++ WG N SGQ G GR+ R+P+++ L G P +ACG H+ +
Sbjct: 209 LFSWGGNASGQLGL-GRDSTGNERLPRRVS-HLVGVPLAL------VACGAMHSVGLTPS 260
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
GT+F WG N GQLG + R HP +K L+S+ +K + CG + TAA+ DG +
Sbjct: 261 GTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTA----DGGVF 316
Query: 141 TSRLWVWGQ-----NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALS-ECGLLQAWGYN 194
T +GQ PR T I Q+SCG H VA + + G L +G
Sbjct: 317 TFGAGTYGQLGHGVKVNEAVPRRVVELM--GTAISQLSCGRCHTVAYAPQSGRLYIFGLG 374
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T E P + G
Sbjct: 375 MSGQLGNG-TLESSALPVTVPG 395
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 304 LYAWGGSQAGQLGL-----GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 358
LY+WG G+LGL G T + P R V+ VACGH HTL
Sbjct: 47 LYSWGLGPNGELGLTQGKDGVDTET----PVSQPERVRRFGT----RAVREVACGHKHTL 98
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADA 414
V + +G ++ G N +GQ ++S E+R +A G HS L+DA
Sbjct: 99 VLLANGSVYSCGANDFGQLGQDRSMRKL-EQVAALSAHEIRAVACGEAHSLALSDA 153
>gi|444915471|ref|ZP_21235603.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444713402|gb|ELW54302.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 752
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 118/376 (31%), Positives = 170/376 (45%), Gaps = 55/376 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G R+ + +P ++ G S + + G H+ AV SDG+
Sbjct: 119 VWAWGNNAYGQLGDDTRDN-----RTVPVQVTGL-----SGVVSVVAGDTHSLAVRSDGS 168
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG N GQLGDGT + R P +V L V S++ G + + A+ +DG++
Sbjct: 169 VWAWGRNTSGQLGDGTRDDRAVPVQVTGLSG--VVSVAAGGNHSLAV----RSDGSV--- 219
Query: 143 RLWVWGQNQGSNFPRLFWGAF-TPNTI-----ICQVSCGSVHVVALSECGLLQAWGYNEY 196
W WG N A+ P + + V+ G H +A+ G + AWG N Y
Sbjct: 220 --WAWGNNASGQLGGAPEAAYPVPWRVEDVSGVVAVAAGQYHSLAVRYDGTVWAWGDNLY 277
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFL-DEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
GQLG G ++G +++L + P L + VS G YHS V +G V+ WG
Sbjct: 278 GQLGDGK----------LEGNSRWLPKQVPGLGGVVAVSAGFYHSLVVRSDGTVWAWGNN 327
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
+ GQLG S P +V+ + G VA G HS + S G L+AWG + GQ
Sbjct: 328 AYGQLGGGSRAHAAS---PVQVLGVSGAVA--VAAGYRHSLVVNSDGTLWAWGSNLDGQR 382
Query: 316 GLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
G G TR P +P L +GV VA G H L + DG + WG N+ G
Sbjct: 383 GDGTLTR----YPTPG-----RVPGL---SGVVSVAAGGGHVLALLSDGTVWAWGDNASG 430
Query: 376 QAANEKSTYAWYPSPV 391
Q + W P V
Sbjct: 431 QLGDGTRHSRWVPRQV 446
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 130/403 (32%), Positives = 186/403 (46%), Gaps = 61/403 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ G N GQ G G R P Q+ L G A +A GH H+ A+ DGT
Sbjct: 69 VWTTGGNGHGQLG-DGTTLSRRTPVQVQ-GLSGVAA--------VAAGHGHSLALRYDGT 118
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG N +GQLGD T + R P +V L S V ++ H A +DG++
Sbjct: 119 VWAWGNNAYGQLGDDTRDNRTVPVQVTGL-SGVVSVVAGDTHSLAV-----RSDGSV--- 169
Query: 143 RLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
W WG+N G+ R T + + V+ G H +A+ G + AWG N
Sbjct: 170 --WAWGRNTSGQLGDGTRDDRAVPVQVTGLSGVVSVAAGGNHSLAVRSDGSVWAWGNNAS 227
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG G P ++ ++ + V+ G+YHS AV +G V+ WG
Sbjct: 228 GQLG-GAPEAAYPVPWRVE----------DVSGVVAVAAGQYHSLAVRYDGTVWAWGDNL 276
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
GQLG L+ G+ LP++V L G+ V+ G HS + S G ++AWG + GQLG
Sbjct: 277 YGQLGDGKLE-GNSRWLPKQVPGLGGVVA--VSAGFYHSLVVRSDGTVWAWGNNAYGQLG 333
Query: 317 LGPQTRSFSLIPNESDTYFRNIPILVV-PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
G + + S P+ V+ +G VA G+ H+LV DG + WG N G
Sbjct: 334 GGSRAHAAS-------------PVQVLGVSGAVAVAAGYRHSLVVNSDGTLWAWGSNLDG 380
Query: 376 QAANEKSTYAWYPSP--VDWCVGEVRKLAAGGGHS-AVLADAC 415
Q + T YP+P V G V +AAGGGH A+L+D
Sbjct: 381 QRGDGTLTR--YPTPGRVPGLSGVV-SVAAGGGHVLALLSDGT 420
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 179/378 (47%), Gaps = 60/378 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + ++ WG N GQ G G + P ++P L G + +A G H A
Sbjct: 365 VNSDGTLWAWGSNLDGQRG-DGTLTRYPTPGRVP-GLSGV--------VSVAAGGGHVLA 414
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ SDGT++ WG N GQLGDGT R P +V +L V +++ G+ + A+ D
Sbjct: 415 LLSDGTVWAWGDNASGQLGDGTRHSRWVPRQVPELSG--VVAVAAGSSFSLAV----RYD 468
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI---------ICQVSCGSVHVVALSECGL 187
G++ W WG N + +L G+ +++ + V+ GS+H +A+ G
Sbjct: 469 GSV-----WSWGDNA---YGQLGHGSTDASSVPLHVRELSEVVAVAAGSMHALAVRADGT 520
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ WG+N+YGQLG G EG+ R Y+ + P L + V+ HS AV +G
Sbjct: 521 VWGWGFNDYGQLGDGF--EGISARR----YSPV--QVPGLSGMVSVAADFGHSLAVRADG 572
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
V+ WG + +LG + + L+P RV A + + ++ G +S A+ + G+L+AW
Sbjct: 573 TVWAWGNNTDSELGDGTTT---RRLVPLRVNAPGTVAL--LSAGYNYSMAMRADGSLWAW 627
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV-PNGVQLVACGHSHTLVYMRDGRI 366
G + AGQLG G T R +P+ V P +A G SH++ DG +
Sbjct: 628 GTNFAGQLGDGSTTS-------------RAVPVRVQGPVRASTLAAGQSHSMAVGSDGFL 674
Query: 367 HGWGYNSYGQAANEKSTY 384
WG+N GQ + T+
Sbjct: 675 WAWGFNFEGQLGDGTLTH 692
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 125/411 (30%), Positives = 185/411 (45%), Gaps = 65/411 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +++ WG N SGQ G R+ + +P ++ G S + +A G H+ A
Sbjct: 163 VRSDGSVWAWGRNTSGQLGDGTRD-----DRAVPVQVTGL-----SGVVSVAAGGNHSLA 212
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V SDG+++ WG N GQLG E P +V+ + V +++ G + + A+ D
Sbjct: 213 VRSDGSVWAWGNNASGQLGGAPEAAYPVPWRVEDVSG--VVAVAAGQYHSLAV----RYD 266
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-----------ICQVSCGSVHVVALSEC 185
GT+ W WG N + +L G N+ + VS G H + +
Sbjct: 267 GTV-----WAWGDNL---YGQLGDGKLEGNSRWLPKQVPGLGGVVAVSAGFYHSLVVRSD 318
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + AWG N YGQLG G +V+ + V+ G HS V+
Sbjct: 319 GTVWAWGNNAYGQLGGGSRAHAASPVQVLG-----------VSGAVAVAAGYRHSLVVNS 367
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G ++ WG GQ G +L + P RV L G+ VA GG H AL S G ++
Sbjct: 368 DGTLWAWGSNLDGQRGDGTLT---RYPTPGRVPGLSGVV--SVAAGGGHVLALLSDGTVW 422
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG + +GQLG G TR +P R +P L +GV VA G S +L DG
Sbjct: 423 AWGDNASGQLGDG--TRHSRWVP-------RQVPEL---SGVVAVAAGSSFSLAVRYDGS 470
Query: 366 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLADAC 415
+ WG N+YGQ + + + P V + EV +AAG H+ AV AD
Sbjct: 471 VWSWGDNAYGQLGHGSTDASSVPLHVR-ELSEVVAVAAGSMHALAVRADGT 520
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 145/350 (41%), Gaps = 80/350 (22%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPA--------------GANSRWLD-- 66
++ WG N SGQ G R + +P+Q+P EL G A G+ W D
Sbjct: 421 VWAWGDNASGQLGDGTRHSRW-VPRQVP-ELSGVVAVAAGSSFSLAVRYDGSVWSWGDNA 478
Query: 67 --------------------------IACGHEHTAAVASDGTLFTWGANEFGQLGDGTE- 99
+A G H AV +DGT++ WG N++GQLGDG E
Sbjct: 479 YGQLGHGSTDASSVPLHVRELSEVVAVAAGSMHALAVRADGTVWGWGFNDYGQLGDGFEG 538
Query: 100 --EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQN------Q 151
R P +V L S V + H A A DGT+ W WG N
Sbjct: 539 ISARRYSPVQVPGL-SGMVSVAADFGHSLAVRA-----DGTV-----WAWGNNTDSELGD 587
Query: 152 GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
G+ RL + +S G + +A+ G L AWG N GQLG G T
Sbjct: 588 GTTTRRLVPLRVNAPGTVALLSAGYNYSMAMRADGSLWAWGTNFAGQLGDGSTTSRAVPV 647
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
RV + P + + ++ G+ HS AV +G ++ WG GQLG +L
Sbjct: 648 RV---------QGPV--RASTLAAGQSHSMAVGSDGFLWAWGFNFEGQLGDGTLT---HH 693
Query: 272 LLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQT 321
LP RV + G+ DV S A+ S G+L+AWG + GQLG P T
Sbjct: 694 ALPVRVPGMSGVVAVDVTLN--LSLAVRSDGSLWAWGNNDVGQLGTQPST 741
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 81/179 (45%), Gaps = 21/179 (11%)
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
HS AV +G V+T G GQLG + S P +V L G + VA G HS AL
Sbjct: 59 HSLAVRPDGTVWTTGGNGHGQLGDGTTLS---RRTPVQVQGLSG--VAAVAAGHGHSLAL 113
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHT 357
G ++AWG + GQ LG TR R +P+ V +GV V G +H+
Sbjct: 114 RYDGTVWAWGNNAYGQ--LGDDTRD-----------NRTVPVQVTGLSGVVSVVAGDTHS 160
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLADAC 415
L DG + WG N+ GQ + P V G V +AAGG HS AV +D
Sbjct: 161 LAVRSDGSVWAWGRNTSGQLGDGTRDDRAVPVQVTGLSGVV-SVAAGGNHSLAVRSDGS 218
>gi|379719198|ref|YP_005311329.1| protein ChiA12 [Paenibacillus mucilaginosus 3016]
gi|378567870|gb|AFC28180.1| ChiA12 [Paenibacillus mucilaginosus 3016]
Length = 1205
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/350 (32%), Positives = 158/350 (45%), Gaps = 67/350 (19%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
IA G H A+ SDGT++ WG N +GQLGDG+ GR P +V+ L+S + AH
Sbjct: 91 IAAGGSHNLAIKSDGTVWAWGFNGYGQLGDGSTTGRNTPVQVEGLRS----IVGAAAHYD 146
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-----ICQVSCG 175
++A ++DGT+ W WG+N+ GS R TP + + +S G
Sbjct: 147 HSLA--LKSDGTV-----WAWGRNEYGQLGDGSKTDR-----HTPVRVKGLDSVVAISSG 194
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
+ +A+ G + AWG NEYGQLG G T + P ++G L +T V+
Sbjct: 195 FGYSLAVKSDGTVWAWGKNEYGQLGNGSTTQS-SAPVQVQG----------LHSVTAVAS 243
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
G+YH+ A+ +G V++WG GQLG S P +V DV G HS
Sbjct: 244 GDYHNLAIKRDGTVWSWGPNLAGQLGDGSDM---DRYTPVQVEGFSSAV--DVDAGFGHS 298
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGH 354
AL S G ++AWG Q + G G T P+ V + V +A G
Sbjct: 299 LALKSDGTVWAWGNYQFNEWGFGSST-----------------PVQVQELDSVVDIAAGT 341
Query: 355 SHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV------DWCVGEV 398
H+L DG + WG N GQ + ST P V +W G+V
Sbjct: 342 QHSLAVRNDGTVWAWGKNDNGQLGDGTSTARLTPIKVQGFGGPEWPEGDV 391
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/320 (31%), Positives = 152/320 (47%), Gaps = 53/320 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I + ++ WG+N GQ G G P Q+ E GA A ++H+ A
Sbjct: 101 IKSDGTVWAWGFNGYGQLG-DGSTTGRNTPVQV--EGLRSIVGA-------AAHYDHSLA 150
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ SDGT++ WG NE+GQLGDG++ R P +VK L S V +IS G + A+ ++D
Sbjct: 151 LKSDGTVWAWGRNEYGQLGDGSKTDRHTPVRVKGLDS--VVAISSGFGYSLAV----KSD 204
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQ---------VSCGSVHVVALSECGL 187
GT+ W WG+N+ + +L G+ T ++ Q V+ G H +A+ G
Sbjct: 205 GTV-----WAWGKNE---YGQLGNGSTTQSSAPVQVQGLHSVTAVASGDYHNLAIKRDGT 256
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ +WG N GQLG G + P ++G++ +D V G HS A+ +G
Sbjct: 257 VWSWGPNLAGQLGDGSDMDRYT-PVQVEGFSSAVD----------VDAGFGHSLALKSDG 305
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
V+ WG + G S P +V LD + D+A G HS A+ + G ++AW
Sbjct: 306 TVWAWGNYQFNEWGFGSST-------PVQVQELDSVV--DIAAGTQHSLAVRNDGTVWAW 356
Query: 308 GGSQAGQLGLGPQTRSFSLI 327
G + GQLG G T + I
Sbjct: 357 GKNDNGQLGDGTSTARLTPI 376
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 138/345 (40%), Gaps = 89/345 (25%)
Query: 68 ACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTA 127
A G HT A+ ++GT++ WG GQLG+G+ G P +V+ L H
Sbjct: 45 AGGESHTLALNANGTVWAWGG---GQLGNGSTTGSPAPVQVQDL------------HSVE 89
Query: 128 AIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
AIA G H +A+ G
Sbjct: 90 AIA-------------------------------------------AGGSHNLAIKSDGT 106
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWG+N YGQLG G T G P ++G L I + HS A+ +G
Sbjct: 107 VWAWGFNGYGQLGDGSTT-GRNTPVQVEG----------LRSIVGAAAHYDHSLALKSDG 155
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
V+ WG GQLG S D+ P RV LD + ++ G +S A+ S G ++AW
Sbjct: 156 TVWAWGRNEYGQLGDGS--KTDRHT-PVRVKGLDSVVA--ISSGFGYSLAVKSDGTVWAW 210
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV-PNGVQLVACGHSHTLVYMRDGRI 366
G ++ GQLG G T+S + P+ V + V VA G H L RDG +
Sbjct: 211 GKNEYGQLGNGSTTQS-------------SAPVQVQGLHSVTAVASGDYHNLAIKRDGTV 257
Query: 367 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
WG N GQ + + P V+ V + AG GHS L
Sbjct: 258 WSWGPNLAGQLGDGSDMDRYTPVQVEGFSSAV-DVDAGFGHSLAL 301
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 88/190 (46%), Gaps = 28/190 (14%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
I + GE H+ A++ NG V+ WG GQLG+ S P V D ++ +A
Sbjct: 41 IRMAAGGESHTLALNANGTVWAWG---GGQLGNGSTTGS-----PAPVQVQDLHSVEAIA 92
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
GG H+ A+ S G ++AWG + GQLG G T RN P+ V G++
Sbjct: 93 AGGSHNLAIKSDGTVWAWGFNGYGQLGDGSTTG-------------RNTPVQV--EGLRS 137
Query: 350 V---ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGG 406
+ A + H+L DG + WG N YGQ + T P V + V +++G G
Sbjct: 138 IVGAAAHYDHSLALKSDGTVWAWGRNEYGQLGDGSKTDRHTPVRVK-GLDSVVAISSGFG 196
Query: 407 HS-AVLADAC 415
+S AV +D
Sbjct: 197 YSLAVKSDGT 206
>gi|380018521|ref|XP_003693176.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
florea]
Length = 1081
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 174/385 (45%), Gaps = 54/385 (14%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQ-LRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
K ++ WG G+ G G E + + IP++L F A IACG +T +
Sbjct: 25 KKDMFCWGSTIHGELGLGGIEDENILIPRELD---FKKAAEIQQ----IACGENYTVVIT 77
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
G +++ G N++GQLG E+GRK + + L + K +CGA+ T AI E
Sbjct: 78 QIGEIYSCGNNDYGQLGH--EKGRKRLQLIPGLDAFVFKKAACGAYHTLAINE------- 128
Query: 139 ISTSRLWVWGQN-------QGSNF----PRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
+L+ WG N NF PR+ T +++ Q++CG H AL+ G
Sbjct: 129 --WGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTLGT--SVVVQIACGMKHAFALTNNGE 184
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
L +WG N GQLG G + P+ I + I ++CG YHS A+S++G
Sbjct: 185 LYSWGSNSEGQLGLGTDIKYEIKPKFISAFIGI--------PIAFIACGGYHSIAISKSG 236
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
V+ WG + GQLG Q + LP ++ L I ACG S LT G ++
Sbjct: 237 AVFGWGKNTFGQLGLNDTQDRN---LPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTC 293
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRI 366
G GQLG G + S ++P + + ++ + V ++CG HTL + GR+
Sbjct: 294 GAGMYGQLGHG--SNSNEILPRQV--------MELMGSTVTQISCGKRHTLALVPSRGRV 343
Query: 367 HGWGYNSYGQAANEKSTYAWYPSPV 391
+ WG GQ N + P V
Sbjct: 344 YAWGLGGAGQLGNHSTRSVTTPQVV 368
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 163/341 (47%), Gaps = 42/341 (12%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE--NDGT 138
+F WG+ G+LG G +E P ++ ++ ++ I+CG + T I + E + G
Sbjct: 28 MFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENYTVVITQIGEIYSCGN 87
Query: 139 ISTSRLWVWGQNQGSNFPRLFWG--AFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
+L G +G +L G AF + + +CG+ H +A++E G L +WG N
Sbjct: 88 NDYGQL---GHEKGRKRLQLIPGLDAF----VFKKAACGAYHTLAINEWGQLFSWGSNTE 140
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG PR++K + Q++CG H+ A++ NGE+Y+WG S
Sbjct: 141 GQLGLNSKNFMESSPRMVKTLGT--------SVVVQIACGMKHAFALTNNGELYSWGSNS 192
Query: 257 VGQLGHCSLQSGDK-ELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
GQLG L + K E+ P+ + A GI I +ACGG HS A++ GA++ WG + GQL
Sbjct: 193 EGQLG---LGTDIKYEIKPKFISAFIGIPIAFIACGGYHSIAISKSGAVFGWGKNTFGQL 249
Query: 316 GLGPQTRSFSLIPNESDTYFRNIP--ILVVPNG-VQLVACGHSHTLVYMRDGRIHGWGYN 372
GL +DT RN+P + + N + ACG ++ DG + G
Sbjct: 250 GL-------------NDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAG 296
Query: 373 SYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
YGQ + ++ P V +G V +++ G H+ L
Sbjct: 297 MYGQLGHGSNSNEILPRQVMELMGSTVTQISCGKRHTLALV 337
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 90/200 (45%), Gaps = 20/200 (10%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG N GQ G G + + I + G P IACG H+ A++ G
Sbjct: 185 LYSWGSNSEGQLGL-GTDIKYEIKPKFISAFIGIPIAF------IACGGYHSIAISKSGA 237
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F WG N FGQLG + R P +++ LQ+ + +CG + + DG + T
Sbjct: 238 VFGWGKNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTV----DGGVFTC 293
Query: 143 RLWVWGQ-NQGSN----FPRLFWGAFTPNTIICQVSCGSVHVVALSEC-GLLQAWGYNEY 196
++GQ GSN PR + + Q+SCG H +AL G + AWG
Sbjct: 294 GAGMYGQLGHGSNSNEILPRQVMELM--GSTVTQISCGKRHTLALVPSRGRVYAWGLGGA 351
Query: 197 GQLGRGITCEGLQGPRVIKG 216
GQLG T + P+V+ G
Sbjct: 352 GQLGNHST-RSVTTPQVVHG 370
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 58/132 (43%), Gaps = 16/132 (12%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I A++ WG N GQ G + + LP +L N++ ACG E +
Sbjct: 232 ISKSGAVFGWGKNTFGQLGLNDTQD-----RNLPCQL---QTLQNAKICYAACGEEFSVF 283
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +FT GA +GQLG G+ P +V +L V ISCG T A+ R
Sbjct: 284 LTVDGGVFTCGAGMYGQLGHGSNSNEILPRQVMELMGSTVTQISCGKRHTLALVPSR--- 340
Query: 137 GTISTSRLWVWG 148
R++ WG
Sbjct: 341 -----GRVYAWG 347
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 8/84 (9%)
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT 357
L K ++ WG + G+LGLG LIP E D F+ +Q +ACG ++T
Sbjct: 22 LHKKKDMFCWGSTIHGELGLGGIEDENILIPRELD--FKK------AAEIQQIACGENYT 73
Query: 358 LVYMRDGRIHGWGYNSYGQAANEK 381
+V + G I+ G N YGQ +EK
Sbjct: 74 VVITQIGEIYSCGNNDYGQLGHEK 97
>gi|126272574|ref|XP_001362426.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Monodelphis domestica]
Length = 1057
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/337 (31%), Positives = 157/337 (46%), Gaps = 34/337 (10%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDTDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG T E ++ PR IK +I Q++CG YHS A+S+ EV++WG
Sbjct: 115 QLGLPGTEEYIKVPRNIKSLTDI--------QIVQIACGYYHSLALSKGSEVFSWGQNKH 166
Query: 258 GQLGH-CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
GQLG L+S P+ + +L GI VA GG HS LT GA++ WG ++ GQLG
Sbjct: 167 GQLGLGFELKSQSA---PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 317 LGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
L +E+D + N+ + + + CG HT ++G + +G YGQ
Sbjct: 224 LN----------DENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 377 AANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
+ +++ P V +G V ++A G H++
Sbjct: 274 LGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 175/376 (46%), Gaps = 45/376 (11%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKKVQDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G +
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I Q++CG H +ALS+ + +WG N++GQLG G
Sbjct: 115 QLGLPGTEEYIKVPRNIKSL--TDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
+ P++IK QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 FELKSQSAPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYP 388
+N KS + W+P
Sbjct: 332 TSNRKSPFTVKGNWFP 347
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 124/256 (48%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +++P+ + + + + + IACG+ H+ A++
Sbjct: 102 KGQVYAWGLDTDGQLGLPGTEEYIKVPRNI-------KSLTDIQIVQIACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F+WG N+ GQLG G E + + P+ +K L F++ + GAH
Sbjct: 155 GSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L F PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G E + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFSWGQNKHGQLGL-GFELKSQSAPQLIKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|126272576|ref|XP_001362510.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Monodelphis domestica]
Length = 1049
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/337 (31%), Positives = 157/337 (46%), Gaps = 34/337 (10%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDTDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG T E ++ PR IK +I Q++CG YHS A+S+ EV++WG
Sbjct: 115 QLGLPGTEEYIKVPRNIKSLTDI--------QIVQIACGYYHSLALSKGSEVFSWGQNKH 166
Query: 258 GQLGH-CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
GQLG L+S P+ + +L GI VA GG HS LT GA++ WG ++ GQLG
Sbjct: 167 GQLGLGFELKSQSA---PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 317 LGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
L +E+D + N+ + + + CG HT ++G + +G YGQ
Sbjct: 224 LN----------DENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 377 AANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
+ +++ P V +G V ++A G H++
Sbjct: 274 LGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 175/376 (46%), Gaps = 45/376 (11%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKKVQDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G +
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I Q++CG H +ALS+ + +WG N++GQLG G
Sbjct: 115 QLGLPGTEEYIKVPRNIKSL--TDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
+ P++IK QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 FELKSQSAPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYP 388
+N KS + W+P
Sbjct: 332 TSNRKSPFTVKGNWFP 347
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 124/256 (48%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +++P+ + + + + + IACG+ H+ A++
Sbjct: 102 KGQVYAWGLDTDGQLGLPGTEEYIKVPRNI-------KSLTDIQIVQIACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F+WG N+ GQLG G E + + P+ +K L F++ + GAH
Sbjct: 155 GSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L F PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G E + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFSWGQNKHGQLGL-GFELKSQSAPQLIKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|403332050|gb|EJY65013.1| hypothetical protein OXYTRI_14837 [Oxytricha trifallax]
gi|403356523|gb|EJY77858.1| hypothetical protein OXYTRI_00501 [Oxytricha trifallax]
Length = 489
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 165/361 (45%), Gaps = 55/361 (15%)
Query: 83 LFTWGANEFGQLGDGTEE-GRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
L +WG + GQLG+G E P V+ L E + ++ +AA+ S
Sbjct: 99 LLSWGNGQNGQLGNGNETLSLSIPSPVQVLSDEDIIQVNASGDISAAVT---------SQ 149
Query: 142 SRLWVWGQNQGSNF--------------PRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
+++ WG+ +G + P L P QV+CG H+ +++ G
Sbjct: 150 GQIYTWGKTRGGSLSQQKSLSRATNLLLPTLI---VAPEVQFVQVACGKTHLAGVTKDGK 206
Query: 188 LQAWGYNEYGQLGRGITCEGLQ-----GPRVIKGY--AKFLDEAPELEKITQVSCGEYHS 240
L WG + G+LG + PR Y F+ A E +KI Q SCG H+
Sbjct: 207 LITWGNPDQGKLGHNAQLQQESKNKSYSPRSYADYNAINFVGGALESKKIIQASCGFQHT 266
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
A ++++GEVYTWG G G LGH + D LP++V L I D CG ++ AL
Sbjct: 267 ACLTQDGEVYTWGFGKNGALGHGNWDQVD---LPKKVEGLSNIVKID--CGMDYTFALDK 321
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI-LVVPNG---VQLVACGHSH 356
G +Y+WG ++ GQLG +S+ N+PI L +P+G V ++CG H
Sbjct: 322 DGNIYSWGSNRYGQLG-----------TTQSNINKHNVPIQLQLPHGSSHVVDISCGEEH 370
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACS 416
+ G WGY + GQ +++ T P +++ +R++ GGGH+ V+ A
Sbjct: 371 SAFLNDKGEAFIWGYGNDGQLGHKEKTNLNQPKKLEF-TEPLRRVVCGGGHTGVITTAGK 429
Query: 417 L 417
L
Sbjct: 430 L 430
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 161/373 (43%), Gaps = 67/373 (17%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ ++ IY WG G + ++ R L P L P +++ +ACG H A
Sbjct: 146 VTSQGQIYTWGKTRGGSLSQ--QKSLSRATNLLLPTLIVAP---EVQFVQVACGKTHLAG 200
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQ----------------LQSEFVKSIS 120
V DG L TWG + G+LG + ++ K L+S+ + S
Sbjct: 201 VTKDGKLITWGNPDQGKLGHNAQLQQESKNKSYSPRSYADYNAINFVGGALESKKIIQAS 260
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQV 172
CG TA + + DG + T W +G+N + P+ G + I ++
Sbjct: 261 CGFQHTACLTQ----DGEVYT---WGFGKNGALGHGNWDQVDLPKKVEGL----SNIVKI 309
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPE-LEKIT 231
CG + AL + G + +WG N YGQLG + + K + P +
Sbjct: 310 DCGMDYTFALDKDGNIYSWGSNRYGQLGTTQS-------NINKHNVPIQLQLPHGSSHVV 362
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
+SCGE HSA +++ GE + WG G+ GQLGH + ++ P+++ + ++ V CG
Sbjct: 363 DISCGEEHSAFLNDKGEAFIWGYGNDGQLGHKEKTNLNQ---PKKLEFTEP--LRRVVCG 417
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL-- 349
G H+ +T+ G L+ +G + GQLG G NES FR P VV L
Sbjct: 418 GGHTGVITTAGKLFLFGRGRDGQLGRGD--------VNESMAAFRIEPKEVVNISQTLKA 469
Query: 350 ----VACGHSHTL 358
+A G +H L
Sbjct: 470 EVLEIALGSNHCL 482
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 107/426 (25%), Positives = 170/426 (39%), Gaps = 81/426 (19%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFT 85
WG +GQ G L IP P ++ ++ + + + +AAV S G ++T
Sbjct: 102 WGNGQNGQLGNGNETLSLSIPS--PVQVL-----SDEDIIQVNASGDISAAVTSQGQIYT 154
Query: 86 WGANEFGQLGDGTEEGRKH----PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
WG G L R P + + +FV+ ++CG A + + DG
Sbjct: 155 WGKTRGGSLSQQKSLSRATNLLLPTLIVAPEVQFVQ-VACGKTHLAGVTK----DG---- 205
Query: 142 SRLWVWGQ-NQG---------------SNFPRL--------FWGAFTPNTIICQVSCGSV 177
+L WG +QG S PR F G + I Q SCG
Sbjct: 206 -KLITWGNPDQGKLGHNAQLQQESKNKSYSPRSYADYNAINFVGGALESKKIIQASCGFQ 264
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H L++ G + WG+ + G LG G + + P+ ++G L I ++ CG
Sbjct: 265 HTACLTQDGEVYTWGFGKNGALGHG-NWDQVDLPKKVEG----------LSNIVKIDCGM 313
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSG-DKELLPRRVVALDG-IFIKDVACGGVHS 295
++ A+ ++G +Y+WG GQLG + QS +K +P ++ G + D++CG HS
Sbjct: 314 DYTFALDKDGNIYSWGSNRYGQLG--TTQSNINKHNVPIQLQLPHGSSHVVDISCGEEHS 371
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS 355
L KG + WG GQLG ++ T L ++ V CG
Sbjct: 372 AFLNDKGEAFIWGYGNDGQLG------------HKEKTNLNQPKKLEFTEPLRRVVCGGG 419
Query: 356 HTLVYMRDGRIHGWGYNSYGQAAN---EKSTYAWYPSPVDWC------VGEVRKLAAGGG 406
HT V G++ +G GQ +S A+ P + EV ++A G
Sbjct: 420 HTGVITTAGKLFLFGRGRDGQLGRGDVNESMAAFRIEPKEVVNISQTLKAEVLEIALGSN 479
Query: 407 HSAVLA 412
H +A
Sbjct: 480 HCLAIA 485
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 86/196 (43%), Gaps = 16/196 (8%)
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
LL +WG + GQLG G L P ++ + E I QV+ SAAV+
Sbjct: 98 LLLSWGNGQNGQLGNGNETLSLSIPSPVQVLSD--------EDIIQVNASGDISAAVTSQ 149
Query: 247 GEVYTWGLGSVGQLG-HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
G++YTWG G L SL LLP +VA + F++ VACG H +T G L
Sbjct: 150 GQIYTWGKTRGGSLSQQKSLSRATNLLLPTLIVAPEVQFVQ-VACGKTHLAGVTKDGKLI 208
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG------VQLVACGHSHTLV 359
WG G+LG Q + S + S + + + G + +CG HT
Sbjct: 209 TWGNPDQGKLGHNAQLQQESKNKSYSPRSYADYNAINFVGGALESKKIIQASCGFQHTAC 268
Query: 360 YMRDGRIHGWGYNSYG 375
+DG ++ WG+ G
Sbjct: 269 LTQDGEVYTWGFGKNG 284
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 124/304 (40%), Gaps = 48/304 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGAN--------SRWLDIACGHEHT 74
+ WG G+ G + +Q K P + N + + +CG +HT
Sbjct: 207 LITWGNPDQGKLGHNAQLQQESKNKSYSPRSYADYNAINFVGGALESKKIIQASCGFQHT 266
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
A + DG ++TWG + G LG G + P+KV+ L S VK I CG T A+ +
Sbjct: 267 ACLTQDGEVYTWGFGKNGALGHGNWDQVDLPKKVEGL-SNIVK-IDCGMDYTFAL----D 320
Query: 135 NDGTISTSRLWVWGQNQ------------GSNFPRLFWGAFTPNTIICQVSCGSVHVVAL 182
DG I + WG N+ N P + ++ +SCG H L
Sbjct: 321 KDGNI-----YSWGSNRYGQLGTTQSNINKHNVPIQLQLPHGSSHVV-DISCGEEHSAFL 374
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
++ G WGY GQLG L P+ ++ E + +V CG H+
Sbjct: 375 NDKGEAFIWGYGNDGQLGHKEKTN-LNQPKKLE----------FTEPLRRVVCGGGHTGV 423
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIF---IKDVACGGVHSCA 297
++ G+++ +G G GQLG + + P+ VV + + ++A G H A
Sbjct: 424 ITTAGKLFLFGRGRDGQLGRGDVNESMAAFRIEPKEVVNISQTLKAEVLEIALGSNHCLA 483
Query: 298 LTSK 301
+ +K
Sbjct: 484 IAAK 487
>gi|356512860|ref|XP_003525133.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 437
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 181/412 (43%), Gaps = 64/412 (15%)
Query: 4 NEIIGETARPVDNIPAKSA-------------IYVWGYNHSGQTGRKGRERQLRIPKQLP 50
+E++ E A P + SA + WG GQ G + +L P +L
Sbjct: 3 DEVMSEVAAPPRRVLLVSAGASHSVALLSGNVVCSWGRGEDGQLGHGDTDDRL-FPTKLS 61
Query: 51 PELFGCPAGANSRWLDIACGHEHTAAVASDG-TLFTWGANEFGQLGDGTEEGRKHPEKVK 109
A + + CG +HT A + G +++WG +FG+LG G P +K
Sbjct: 62 -------ALDGQDIICVTCGADHTMARSESGRDVYSWGWGDFGRLGHGDHSDLLIPHPIK 114
Query: 110 QLQSEFVKSISCG-AHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPR-LFWGAFTPNT 167
LQ ++ I+CG +HC A + S++ WG+NQ + P
Sbjct: 115 ALQGLMIQQIACGDSHCLAVTMD----------SQVLSWGRNQNGELGLGTAEDSLLPQK 164
Query: 168 I-------ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF 220
I I V+ G+ H VA+++ G L WG+ YG LG G + L +V
Sbjct: 165 IQIFEEIPIKMVAAGAEHSVAITKDGNLYGWGWGRYGNLGLGDRNDRLLPEKV------- 217
Query: 221 LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL 280
+ +K+ V+CG H+ VS +G +YT G G GQLGH + L+PR+V AL
Sbjct: 218 ---TVDGDKMAMVACGWRHTICVSSSGGLYTNGWGKYGQLGHGDFED---HLVPRKVQAL 271
Query: 281 DGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI 340
FI V+ G HS ALTS G L WG ++ GQ+G+G S + N P
Sbjct: 272 SDKFISQVSGGWRHSMALTSSGQLLGWGWNKFGQIGVGNNFDCCSPMQ-------VNFP- 323
Query: 341 LVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVD 392
VQ+++CG HT+ ++ WG + GQ N ++ P+ ++
Sbjct: 324 --HDQKVQMISCGWRHTIAVTERENVYSWGRGANGQLGNGETIDRNVPTIIE 373
>gi|442629373|ref|NP_001261249.1| CG9153, isoform C [Drosophila melanogaster]
gi|323301230|gb|ADX35957.1| LD13353p [Drosophila melanogaster]
gi|440215116|gb|AGB93944.1| CG9153, isoform C [Drosophila melanogaster]
Length = 1062
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 173/393 (44%), Gaps = 79/393 (20%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG GQ G G E Q+ P Q+P P A + +ACGH HT + + G
Sbjct: 7 LYCWGSTSHGQLGLGGIEDEQILTPSQIP----WTPDTAVQQ---VACGHRHTLFLTATG 59
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
++ G+N++ QL G P K PR + +
Sbjct: 60 KVYACGSNDYSQL------GHDLPTK-----------------------RPRMSPFLL-- 88
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGR 201
P L + +I Q+ CGS H +ALS+ G + +WG N+ GQLG
Sbjct: 89 -------------IPEL------QDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGH 129
Query: 202 GITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG 261
E +Q P+V++ + + Q++CG HS A++ GE+Y+WG GQLG
Sbjct: 130 ATDKEIVQLPKVVRQLVT--------KTVVQIACGNNHSLALTSCGELYSWGSNIYGQLG 181
Query: 262 HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQT 321
S P R+ L GI + +ACGG HS ++ GA++ WG + GQLGL +T
Sbjct: 182 VNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDET 241
Query: 322 -RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANE 380
RS+ P + T R + GV+ VACG ++ +G + G +YGQ +
Sbjct: 242 NRSY---PTQLKT-LRTL-------GVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHG 290
Query: 381 KSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
S+ P V +G + ++A G H+ L
Sbjct: 291 FSSNEMLPRMVMELMGSTITQVACGNRHTLALV 323
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 98/314 (31%), Positives = 144/314 (45%), Gaps = 41/314 (13%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTA 75
+ A +Y G N Q G ++ R+ P L PEL + + I CG H+
Sbjct: 55 LTATGKVYACGSNDYSQLGHDLPTKRPRMSPFLLIPEL------QDYVIIQICCGSRHSL 108
Query: 76 AVASDGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
A++ G + +WG N+ GQLG T+ E + P+ V+QL ++ V I+CG + + A+
Sbjct: 109 ALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALT---- 164
Query: 135 NDGTISTSRLWVWGQN----QGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALS 183
S L+ WG N G N P P + + ++CG H +S
Sbjct: 165 -----SCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLIS 219
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ G + WG N GQLG + Y L L + V+CG+ S +
Sbjct: 220 KSGAVFGWGRNNCGQLGL--------NDETNRSYPTQLKTLRTL-GVRFVACGDEFSVFL 270
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKG 302
+ G V+T G G+ GQLGH E+LPR V+ L G I VACG H+ AL S+G
Sbjct: 271 TNEGGVFTCGAGAYGQLGH---GFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRG 327
Query: 303 ALYAWGGSQAGQLG 316
+YA+G +GQLG
Sbjct: 328 RVYAFGLGSSGQLG 341
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 120/269 (44%), Gaps = 42/269 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+ WG N GQ G + +++PK + + IACG+ H+ A+ S G
Sbjct: 116 VLSWGDNDCGQLGHATDKEIVQLPKVVR-------QLVTKTVVQIACGNNHSLALTSCGE 168
Query: 83 LFTWGANEFGQLGDGTEEGRKH---PEKVKQLQSEFVKSISCGAHCTAAIAEP------- 132
L++WG+N +GQLG + H P ++ L + +I+CG + + I++
Sbjct: 169 LYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWG 228
Query: 133 RENDGTISTSRLWVWGQNQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
R N G + G N +N +P T V+CG V L+ G +
Sbjct: 229 RNNCGQL--------GLNDETNRSYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGGVFT 278
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS-AAVSENGEV 249
G YGQLG G + + PR++ ITQV+CG H+ A V G V
Sbjct: 279 CGAGAYGQLGHGFSSNEML-PRMVMELMG--------STITQVACGNRHTLALVPSRGRV 329
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
Y +GLGS GQLG S +S +LP+ V+
Sbjct: 330 YAFGLGSSGQLGTRSTKS---LMLPQVVI 355
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 92/202 (45%), Gaps = 22/202 (10%)
Query: 23 IYVWGYNHSGQTGRKGRE--RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
+Y WG N GQ G P +L L G P A IACG H+ ++
Sbjct: 169 LYSWGSNIYGQLGVNSPNDLTHCNYPLRLT-TLLGIPLAA------IACGGNHSFLISKS 221
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N GQLG E R +P ++K L++ V+ ++CG + + N+G +
Sbjct: 222 GAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLT----NEGGVF 277
Query: 141 TSRLWVWGQ-----NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC-GLLQAWGYN 194
T +GQ + PR+ + I QV+CG+ H +AL G + A+G
Sbjct: 278 TCGAGAYGQLGHGFSSNEMLPRMVMELM--GSTITQVACGNRHTLALVPSRGRVYAFGLG 335
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG T + L P+V+ G
Sbjct: 336 SSGQLGTRST-KSLMLPQVVIG 356
>gi|328784403|ref|XP_395217.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
mellifera]
Length = 1081
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 174/385 (45%), Gaps = 54/385 (14%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQ-LRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
K ++ WG G+ G G E + + IP++L F A IACG +T +
Sbjct: 25 KKDMFCWGSTIHGELGLGGIEDENILIPRELD---FKKAAEIQQ----IACGENYTVVIT 77
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
G +++ G N++GQLG E+GRK + + L + K +CGA+ T AI E
Sbjct: 78 QIGEIYSCGNNDYGQLGH--EKGRKRLQLIPGLDAFVFKKAACGAYHTLAINE------- 128
Query: 139 ISTSRLWVWGQN-------QGSNF----PRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
+L+ WG N NF PR+ T +++ Q++CG H AL+ G
Sbjct: 129 --WGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTLGT--SVVVQIACGMKHAFALTNNGE 184
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
L +WG N GQLG G + P+ I + I ++CG YHS A+S++G
Sbjct: 185 LYSWGSNSEGQLGLGTDTKYEIKPKFISAFIGI--------PIAFIACGGYHSIAISKSG 236
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
V+ WG + GQLG Q + LP ++ L I ACG S LT G ++
Sbjct: 237 AVFGWGKNTFGQLGLNDTQDRN---LPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTC 293
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRI 366
G GQLG G + S ++P + + ++ + V ++CG HTL + GR+
Sbjct: 294 GAGMYGQLGHG--SNSNEILPRQV--------MELMGSTVTQISCGKRHTLALVPSRGRV 343
Query: 367 HGWGYNSYGQAANEKSTYAWYPSPV 391
+ WG GQ N + P V
Sbjct: 344 YAWGLGGAGQLGNHSTRSVTTPQVV 368
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 164/341 (48%), Gaps = 42/341 (12%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE--NDGT 138
+F WG+ G+LG G +E P ++ ++ ++ I+CG + T I + E + G
Sbjct: 28 MFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENYTVVITQIGEIYSCGN 87
Query: 139 ISTSRLWVWGQNQGSNFPRLFWG--AFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
+L G +G +L G AF + + +CG+ H +A++E G L +WG N
Sbjct: 88 NDYGQL---GHEKGRKRLQLIPGLDAF----VFKKAACGAYHTLAINEWGQLFSWGSNTE 140
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG PR++K + + Q++CG H+ A++ NGE+Y+WG S
Sbjct: 141 GQLGLNSKNFMESSPRMVKTLGTSV--------VVQIACGMKHAFALTNNGELYSWGSNS 192
Query: 257 VGQLGHCSLQSGDK-ELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
GQLG L + K E+ P+ + A GI I +ACGG HS A++ GA++ WG + GQL
Sbjct: 193 EGQLG---LGTDTKYEIKPKFISAFIGIPIAFIACGGYHSIAISKSGAVFGWGKNTFGQL 249
Query: 316 GLGPQTRSFSLIPNESDTYFRNIP--ILVVPNG-VQLVACGHSHTLVYMRDGRIHGWGYN 372
GL +DT RN+P + + N + ACG ++ DG + G
Sbjct: 250 GL-------------NDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAG 296
Query: 373 SYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
YGQ + ++ P V +G V +++ G H+ L
Sbjct: 297 MYGQLGHGSNSNEILPRQVMELMGSTVTQISCGKRHTLALV 337
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 90/200 (45%), Gaps = 20/200 (10%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG N GQ G G + + I + G P IACG H+ A++ G
Sbjct: 185 LYSWGSNSEGQLGL-GTDTKYEIKPKFISAFIGIPIAF------IACGGYHSIAISKSGA 237
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F WG N FGQLG + R P +++ LQ+ + +CG + + DG + T
Sbjct: 238 VFGWGKNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTV----DGGVFTC 293
Query: 143 RLWVWGQ-NQGSN----FPRLFWGAFTPNTIICQVSCGSVHVVALSEC-GLLQAWGYNEY 196
++GQ GSN PR + + Q+SCG H +AL G + AWG
Sbjct: 294 GAGMYGQLGHGSNSNEILPRQVMELM--GSTVTQISCGKRHTLALVPSRGRVYAWGLGGA 351
Query: 197 GQLGRGITCEGLQGPRVIKG 216
GQLG T + P+V+ G
Sbjct: 352 GQLGNHST-RSVTTPQVVHG 370
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 58/132 (43%), Gaps = 16/132 (12%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I A++ WG N GQ G + + LP +L N++ ACG E +
Sbjct: 232 ISKSGAVFGWGKNTFGQLGLNDTQD-----RNLPCQL---QTLQNAKICYAACGEEFSVF 283
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +FT GA +GQLG G+ P +V +L V ISCG T A+ R
Sbjct: 284 LTVDGGVFTCGAGMYGQLGHGSNSNEILPRQVMELMGSTVTQISCGKRHTLALVPSR--- 340
Query: 137 GTISTSRLWVWG 148
R++ WG
Sbjct: 341 -----GRVYAWG 347
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 8/84 (9%)
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT 357
L K ++ WG + G+LGLG LIP E D F+ +Q +ACG ++T
Sbjct: 22 LHKKKDMFCWGSTIHGELGLGGIEDENILIPRELD--FKK------AAEIQQIACGENYT 73
Query: 358 LVYMRDGRIHGWGYNSYGQAANEK 381
+V + G I+ G N YGQ +EK
Sbjct: 74 VVITQIGEIYSCGNNDYGQLGHEK 97
>gi|395501386|ref|XP_003755076.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Sarcophilus harrisii]
Length = 979
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 156/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDTDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG T E ++ PR IK +I Q++CG YHS A+S+ EV++WG
Sbjct: 115 QLGLPGTEEYIRVPRNIKSLTDI--------QIVQIACGYYHSLALSKGSEVFSWGQNKH 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG QS P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGFELKRQSS-----PQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D + N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 176/376 (46%), Gaps = 45/376 (11%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKKVQDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G +
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I Q++CG H +ALS+ + +WG N++GQLG G
Sbjct: 115 QLGLPGTEEYIRVPRNIKS--LTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
+ P++IK TQV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 FELKRQSSPQLIKSLLGI--------PFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYP 388
+N KS + W+P
Sbjct: 332 TSNRKSPFTVKGNWFP 347
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 123/256 (48%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + + + + IACG+ H+ A++
Sbjct: 102 KGQVYAWGLDTDGQLGLPGTEEYIRVPRNI-------KSLTDIQIVQIACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTEEGRK-HPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F+WG N+ GQLG G E R+ P+ +K L F + + GAH
Sbjct: 155 GSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L F PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 94/202 (46%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G E + + QL L G P + +A G H+ +
Sbjct: 156 SEVFSWGQNKHGQLGL-GFELKRQSSPQLIKSLLGIP------FTQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|395501382|ref|XP_003755074.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Sarcophilus harrisii]
Length = 1057
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 156/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDTDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG T E ++ PR IK +I Q++CG YHS A+S+ EV++WG
Sbjct: 115 QLGLPGTEEYIRVPRNIKSLTDI--------QIVQIACGYYHSLALSKGSEVFSWGQNKH 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG QS P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGFELKRQSS-----PQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D + N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 176/376 (46%), Gaps = 45/376 (11%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKKVQDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G +
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I Q++CG H +ALS+ + +WG N++GQLG G
Sbjct: 115 QLGLPGTEEYIRVPRNIKSL--TDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
+ P++IK TQV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 FELKRQSSPQLIKSLLGI--------PFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYP 388
+N KS + W+P
Sbjct: 332 TSNRKSPFTVKGNWFP 347
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 123/256 (48%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + + + + IACG+ H+ A++
Sbjct: 102 KGQVYAWGLDTDGQLGLPGTEEYIRVPRNI-------KSLTDIQIVQIACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTEEGRK-HPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F+WG N+ GQLG G E R+ P+ +K L F + + GAH
Sbjct: 155 GSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L F PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 94/202 (46%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G E + + QL L G P + +A G H+ +
Sbjct: 156 SEVFSWGQNKHGQLGL-GFELKRQSSPQLIKSLLGIP------FTQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|395834129|ref|XP_003790065.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Otolemur
garnettii]
Length = 1050
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 153/312 (49%), Gaps = 52/312 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G ER+ P+Q+ A A+ + +ACG H+ A++ G
Sbjct: 55 VYTCGLNTKGQLGH---EREGNKPEQIG-------ALADQHIIHVACGESHSLALSDRGQ 104
Query: 83 LFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
LF+WGA GQLG TE+ P +++L + + +SCG HC A A DG
Sbjct: 105 LFSWGAGSDGQLGLTTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA-----DG--- 156
Query: 141 TSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
+ + WG+N G FP +P + + QV+ G H ALS G
Sbjct: 157 --QFFTWGKNSHGQLGLGKEFP----SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ WG N GQLG + R + K L +K+ +SCGE H+A +++NG
Sbjct: 211 VFGWGMNNAGQLGLSD-----EKDRESPCHVKLL----RTQKVVYISCGEEHTAVLTKNG 261
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYA 306
V+T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG H+ A S G +YA
Sbjct: 262 GVFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 307 WGGSQAGQLGLG 318
+G GQLG G
Sbjct: 319 FGCGARGQLGTG 330
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 159/341 (46%), Gaps = 32/341 (9%)
Query: 83 LFTWGANEFGQLGDGTEEG--RKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG GQ G T P+ + VK ++CG + + + E G +
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLE----GGEVY 56
Query: 141 TSRLWVWGQ---NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T L GQ + N P GA II V+CG H +ALS+ G L +WG G
Sbjct: 57 TCGLNTKGQLGHEREGNKPEQI-GALADQHII-HVACGESHSLALSDRGQLFSWGAGSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG T + + PR+I+ + + I QVSCG +H A++ +G+ +TWG S
Sbjct: 115 QLGLTTTEDSVAVPRLIQKLNQ--------QTILQVSCGNWHCLALAADGQFFTWGKNSH 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG + + P+RV +L+GI + VA GG HS AL+ GA++ WG + AGQLGL
Sbjct: 167 GQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+ ES + + L+ V ++CG HT V ++G + +G S GQ
Sbjct: 225 SDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQL 274
Query: 378 ANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
++ P V +G EV ++A G H+ + L
Sbjct: 275 GHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 35/252 (13%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+ ++ WG GQ G E + +P+ + L ++CG+ H A+A+
Sbjct: 102 RGQLFSWGAGSDGQLGLTTTEDSVAVPRLIQ-------KLNQQTILQVSCGNWHCLALAA 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG FTWG N GQLG G E + P++V+ L+ + ++ G + A++
Sbjct: 155 DGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-------- 206
Query: 139 ISTSRLWVWGQNQGSNF--------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
+ ++ WG N + +SCG H L++ G +
Sbjct: 207 -LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFT 265
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEV 249
+G GQLG + + RV++ ++TQ++CG H+ A V +G +
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGS---------EVTQIACGRQHTLAFVPSSGLI 316
Query: 250 YTWGLGSVGQLG 261
Y +G G+ GQLG
Sbjct: 317 YAFGCGARGQLG 328
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 97/211 (45%), Gaps = 28/211 (13%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPE----LFGCPAGANSRWLDIACGHE 72
+ A + WG N GQ G G+E P Q P+ L G P +A G
Sbjct: 152 LAADGQFFTWGKNSHGQLGL-GKE----FPSQASPQRVRSLEGIPLA------QVAAGGA 200
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
H+ A++ G +F WG N GQLG E+ R+ P VK L+++ V ISCG TA +
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT-- 258
Query: 133 RENDGTI-----STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECG 186
+N G S +L N N PR + + Q++CG H +A + G
Sbjct: 259 -KNGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELM--GSEVTQIACGRQHTLAFVPSSG 314
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGY 217
L+ A+G GQLG G TC ++ P +KGY
Sbjct: 315 LIYAFGCGARGQLGTGHTC-NVKCPSPVKGY 344
>gi|299471207|emb|CBN79063.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 513
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 146/303 (48%), Gaps = 38/303 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG GQ G Q R P L A + + +ACG HT ++ DG
Sbjct: 9 VYSWGRGEDGQLGLGDTNDQDR------PVL--VDALKSKGVVQVACGSGHTVVLSEDGA 60
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++TWG + G+LG G + P V+ L+ + + +CG++ TAA+ + E
Sbjct: 61 VYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGE-------- 112
Query: 143 RLWVW----------GQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
L+ W G G P + + Q++CGS H V L++ G + WG
Sbjct: 113 -LYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWG 171
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
E G +G +G Q Y + E+ + + +TQV+ +H+AA++ GE++TW
Sbjct: 172 DKENGVVGH-TNADGHQ-------YLPRMLESLQAKTVTQVAACGFHTAALTAAGEIFTW 223
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G G G+LGH ++ +++PR V AL G + VACGG HS A+ G LY WGG +
Sbjct: 224 GEGKFGRLGHGMERN---QMVPRMVEALMGKRVGHVACGGFHSAAILDSGELYTWGGGEH 280
Query: 313 GQL 315
GQ+
Sbjct: 281 GQV 283
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 146/305 (47%), Gaps = 36/305 (11%)
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +++WG E GQLG G + P V L+S+ V ++CG+ T ++E DG +
Sbjct: 7 GLVYSWGRGEDGQLGLGDTNDQDRPVLVDALKSKGVVQVACGSGHTVVLSE----DGAVY 62
Query: 141 TSRLWVWGQNQGSNFPRLFWG-AFTPNTI-------ICQVSCGSVHVVALSECGLLQAWG 192
T WG+ G + P + I Q +CGS H A+++ G L WG
Sbjct: 63 T-----WGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWG 117
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
YG+LG G G P ++K DE ++TQ++CG H+ +++ G+VYTW
Sbjct: 118 GGMYGKLGHG-NESGHPTPCMVK---HLRDEGA---RVTQIACGSRHTVVLTDLGKVYTW 170
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G G +GH + + + LPR + +L + VA G H+ ALT+ G ++ WG +
Sbjct: 171 GDKENGVVGHTN--ADGHQYLPRMLESLQAKTVTQVAACGFHTAALTAAGEIFTWGEGKF 228
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYN 372
G+LG G + ++P R + L+ V VACG H+ + G ++ WG
Sbjct: 229 GRLGHGMERN--QMVP-------RMVEALMGKR-VGHVACGGFHSAAILDSGELYTWGGG 278
Query: 373 SYGQA 377
+GQ
Sbjct: 279 EHGQV 283
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 121/250 (48%), Gaps = 20/250 (8%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ QV+CGS H V LSE G + WG + G+LG G PR++ EA E +
Sbjct: 42 VVQVACGSGHTVVLSEDGAVYTWGRGDDGRLGHGDNGWKYV-PRIV--------EALEGQ 92
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
+I Q +CG YH+AAV++ GE+YTWG G G+LGH + +SG + + +G + +
Sbjct: 93 RIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGN-ESGHPTPCMVKHLRDEGARVTQI 151
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
ACG H+ LT G +Y WG + G +G +P R + L Q
Sbjct: 152 ACGSRHTVVLTDLGKVYTWGDKENGVVG-HTNADGHQYLP-------RMLESLQAKTVTQ 203
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGH 407
+ ACG HT G I WG +G+ + P V+ +G+ V +A GG H
Sbjct: 204 VAACGF-HTAALTAAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFH 262
Query: 408 SAVLADACSL 417
SA + D+ L
Sbjct: 263 SAAILDSGEL 272
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 149/347 (42%), Gaps = 75/347 (21%)
Query: 22 AIYVWGYNHSGQTGR--KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
A+Y WG G+ G G + RI + L + R + CG HTAAV
Sbjct: 60 AVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQ----------RIVQATCGSYHTAAVTD 109
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSE--FVKSISCGAHCTAAIAEPRENDG 137
G L+TWG +G+LG G E G P VK L+ E V I+CG+ T + +
Sbjct: 110 KGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTD------ 163
Query: 138 TISTSRLWVWGQNQG-----------SNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
+++ WG + PR+ + T+ +CG H AL+ G
Sbjct: 164 ---LGKVYTWGDKENGVVGHTNADGHQYLPRMLE-SLQAKTVTQVAACG-FHTAALTAAG 218
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV--- 243
+ WG ++G+LG G+ + PR++ EA +++ V+CG +HSAA+
Sbjct: 219 EIFTWGEGKFGRLGHGMERNQMV-PRMV--------EALMGKRVGHVACGGFHSAAILDS 269
Query: 244 --------SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
E+G+VYT+G G G+LGH ++ K +P V L + + VA H+
Sbjct: 270 GELYTWGGGEHGQVYTFGNGDHGKLGHGDVR---KVSVPTLVAGLVKMHVVKVASYNEHT 326
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSF-----SLIPNE--SDTYF 335
AL G+ + L + SF SL+ N+ SD F
Sbjct: 327 AALA---------GASSSTPALSSMSSSFMTDIRSLLDNQDLSDVTF 364
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 76/173 (43%), Gaps = 22/173 (12%)
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
G VY+WG G GQLG D+ +L V AL + VACG H+ L+ GA+Y
Sbjct: 7 GLVYSWGRGEDGQLGLGDTNDQDRPVL---VDALKSKGVVQVACGSGHTVVLSEDGAVYT 63
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQLV--ACGHSHTLVYMRD 363
WG G+LG G D ++ +P +V G ++V CG HT
Sbjct: 64 WGRGDDGRLGHG-------------DNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDK 110
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE---VRKLAAGGGHSAVLAD 413
G ++ WG YG+ + + P V E V ++A G H+ VL D
Sbjct: 111 GELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTD 163
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 51/125 (40%), Gaps = 19/125 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A I+ WG G+ G G ER +P+ + L G G +ACG H+AA
Sbjct: 214 LTAAGEIFTWGEGKFGRLGH-GMERNQMVPRMVEA-LMGKRVG------HVACGGFHSAA 265
Query: 77 VASDGTLFTWGANE-----------FGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
+ G L+TWG E G+LG G P V L V ++
Sbjct: 266 ILDSGELYTWGGGEHGQVYTFGNGDHGKLGHGDVRKVSVPTLVAGLVKMHVVKVASYNEH 325
Query: 126 TAAIA 130
TAA+A
Sbjct: 326 TAALA 330
>gi|395501384|ref|XP_003755075.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Sarcophilus harrisii]
Length = 1049
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 156/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDTDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG T E ++ PR IK +I Q++CG YHS A+S+ EV++WG
Sbjct: 115 QLGLPGTEEYIRVPRNIKSLTDI--------QIVQIACGYYHSLALSKGSEVFSWGQNKH 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG QS P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGFELKRQSS-----PQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D + N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 176/376 (46%), Gaps = 45/376 (11%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKKVQDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G +
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I Q++CG H +ALS+ + +WG N++GQLG G
Sbjct: 115 QLGLPGTEEYIRVPRNIKSL--TDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
+ P++IK TQV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 FELKRQSSPQLIKSLLGI--------PFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYP 388
+N KS + W+P
Sbjct: 332 TSNRKSPFTVKGNWFP 347
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 123/256 (48%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + + + + IACG+ H+ A++
Sbjct: 102 KGQVYAWGLDTDGQLGLPGTEEYIRVPRNI-------KSLTDIQIVQIACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTEEGRK-HPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F+WG N+ GQLG G E R+ P+ +K L F + + GAH
Sbjct: 155 GSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L F PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 94/202 (46%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G E + + QL L G P + +A G H+ +
Sbjct: 156 SEVFSWGQNKHGQLGL-GFELKRQSSPQLIKSLLGIP------FTQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>gi|326673186|ref|XP_685685.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
Length = 1053
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 155/335 (46%), Gaps = 38/335 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P + + + + V+ + CG T + E DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEVLLEPRRCEFFEGKRVRDVGCGRRHTVFLLE----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG G
Sbjct: 57 TCGCNDLGQLGHEKARKKPEQVVSLDAQN--IVAVSCGEAHTLALNDKGQVFAWGLGSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG I + L+ PR +K ++ ITQV+CG +HS A++ GE+++WG
Sbjct: 115 QLGLSIVEDCLRVPRTVKSLSEV--------HITQVACGYWHSLALARGGEIFSWGQNKY 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG Q G P+ + +L GI ++ GG HS LT GA++ WG ++ GQLGL
Sbjct: 167 GQLGLG--QQGACVCSPQVIQSLQGIPFGQISAGGAHSFGLTLSGAIFGWGRNKFGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
G D R P+L+ V + CG HT ++G + +G Y
Sbjct: 225 G-------------DNDDRRFPVLLKTLRSQQVVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHS 408
GQ + + + P V +G V ++A G H+
Sbjct: 272 GQLGHNSTNHEVNPRKVFELMGSVVSQIACGRQHT 306
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 167/380 (43%), Gaps = 50/380 (13%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ C R D+ CG HT + DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEVLLEPRR-------CEFFEGKRVRDVGCGRRHTVFLLEDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRL 144
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ ND ++
Sbjct: 57 TCGCNDLGQLGH--EKARKKPEQVVSLDAQNIVAVSCGEAHTLAL-----ND----KGQV 105
Query: 145 WVWGQNQGSNFPRLFWG--AFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYNE 195
+ WG P T+ I QV+CG H +AL+ G + +WG N+
Sbjct: 106 FAWGLGSDGQLGLSIVEDCLRVPRTVKSLSEVHITQVACGYWHSLALARGGEIFSWGQNK 165
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
YGQLG G + P+VI+ L P Q+S G HS ++ +G ++ WG
Sbjct: 166 YGQLGLGQQGACVCSPQVIQS----LQGIP----FGQISAGGAHSFGLTLSGAIFGWGRN 217
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
GQLG L D P + L + + CG H+ ALT +G ++ +G GQL
Sbjct: 218 KFGQLG---LGDNDDRRFPVLLKTLRSQQVVYICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Query: 316 GLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSY 374
G + P + ++ V +ACG HTL ++ G+I +G
Sbjct: 275 GHNSTNHEVN--PRKVFELMGSV--------VSQIACGRQHTLAFIPSSGKIDSFGLGGN 324
Query: 375 GQAANEKSTYAWYPSPVDWC 394
GQ + P+PV C
Sbjct: 325 GQLGTRSTCNRISPTPVKGC 344
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 129/298 (43%), Gaps = 72/298 (24%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG GQ G E LR+P+ + + + +ACG+ H+ A+A
Sbjct: 102 KGQVFAWGLGSDGQLGLSIVEDCLRVPRTVK-------SLSEVHITQVACGYWHSLALAR 154
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
G +F+WG N++GQLG G + A + P+
Sbjct: 155 GGEIFSWGQNKYGQLGLGQQ--------------------------GACVCSPQ------ 182
Query: 140 STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
V QG F ++ S G H L+ G + WG N++GQL
Sbjct: 183 ------VIQSLQGIPFGQI--------------SAGGAHSFGLTLSGAIFGWGRNKFGQL 222
Query: 200 GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ 259
G G + + P ++K +++ + CGE H+AA+++ G V+T+G G GQ
Sbjct: 223 GLGDN-DDRRFPVLLKTLRS--------QQVVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYAWGGSQAGQLG 316
LGH S + E+ PR+V L G + +ACG H+ A S G + ++G GQLG
Sbjct: 274 LGH---NSTNHEVNPRKVFELMGSVVSQIACGRQHTLAFIPSSGKIDSFGLGGNGQLG 328
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 95/201 (47%), Gaps = 22/201 (10%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
I+ WG N GQ G G++ Q+ L G P G I+ G H+ + G
Sbjct: 158 IFSWGQNKYGQLGL-GQQGACVCSPQVIQSLQGIPFG------QISAGGAHSFGLTLSGA 210
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F WG N+FGQLG G + R+ P +K L+S+ V I CG TAA+ + +G + T
Sbjct: 211 IFGWGRNKFGQLGLGDNDDRRFPVLLKTLRSQQVVYICCGEDHTAALTK----EGGVFTF 266
Query: 143 RLWVWGQ------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYNE 195
+GQ N N PR + +++ Q++CG H +A + G + ++G
Sbjct: 267 GAGGYGQLGHNSTNHEVN-PRKVFELM--GSVVSQIACGRQHTLAFIPSSGKIDSFGLGG 323
Query: 196 YGQLGRGITCEGLQGPRVIKG 216
GQLG TC + P +KG
Sbjct: 324 NGQLGTRSTCNRI-SPTPVKG 343
>gi|294874340|ref|XP_002766907.1| Secretion-regulating guanine nucleotide exchange factor, putative
[Perkinsus marinus ATCC 50983]
gi|239868282|gb|EEQ99624.1| Secretion-regulating guanine nucleotide exchange factor, putative
[Perkinsus marinus ATCC 50983]
Length = 577
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 124/455 (27%), Positives = 194/455 (42%), Gaps = 104/455 (22%)
Query: 17 IPAKSAIYVWGYNH-SGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTA 75
+ A S ++ WG +G +G E L + A R +A G H
Sbjct: 166 VTADSRVFAWGRMPWTGAQASQGLEDVLSL--------------ARKRIRSVAIGAGHAL 211
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
A+ G + +WG N+ GQLG G E R PE VK ++ I+CG + A+ +
Sbjct: 212 ALTEGGKVMSWGLNDSGQLGTGDERSRIIPETVKLPSDVYIDKIACGPDYSVAVTK---- 267
Query: 136 DGTISTSRLWVWGQNQGSNFPRLFWGAF--------------TPNTIICQVSCGSVHVVA 181
+LW WG+ Q SN+PRLF + + I +VSCG H++A
Sbjct: 268 -----AGQLWTWGRYQASNWPRLFVDTWCNGNKPGCDNTAVGLAGSRILKVSCGDQHMLA 322
Query: 182 LSECGLLQAWGYNEYGQLG---RGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
L++ G + +WGYN++GQLG G+ G Q P + P L KI+ ++ G
Sbjct: 323 LTKEGEVFSWGYNDFGQLGWGLHGVDVVGQQRPH----------KVPHLPKISDIAAGGG 372
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQS---GDKELLPRRVVALDGIFIKDVACGGVHS 295
HS AV ++G VY+WG S GQ+GH Q + +P+ V K V G V +
Sbjct: 373 HSVAVGDDGAVYSWGSNSQGQIGHGLRQDFAEATRVQMPQPV--------KAVTAGKVTT 424
Query: 296 CAL--TSKGALYAWGGSQAGQLGLGPQ-----TRSFSLIPNESDTYFRNIP--------- 339
+ + ++ WG QA GP+ ++ + N P
Sbjct: 425 LLVCDDADNSVIMWGAVQAA----GPEMVEAPVKAAEGMQNGHKEDKTEAPGVAASSVMA 480
Query: 340 ---------ILVVPNG-VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWY-P 388
+L+ G V ++ G +H V ++D ++G+GYN QA + S Y + P
Sbjct: 481 KLGGGGSASVLIPGQGEVTTMSIGEAHGAV-VKDATLYGFGYNYENQAIDTPSKYFFVPP 539
Query: 389 SPV----------DWCVGEVRKLAAGGGHSAVLAD 413
+PV D+ ++ LA GG S +A+
Sbjct: 540 TPVDLNEMHKGHDDFKFNKISDLACGGSMSLAVAN 574
>gi|114321835|ref|YP_743518.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
ehrlichii MLHE-1]
gi|114228229|gb|ABI58028.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
ehrlichii MLHE-1]
Length = 818
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 118/370 (31%), Positives = 171/370 (46%), Gaps = 67/370 (18%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++ WG N G+ G G +P+Q+ G +S W ++ G +HT A
Sbjct: 138 VKADGTLWAWGRNGYGRLGL-GDTDDRDVPEQV---------GTDSDWTAVSAGRDHTVA 187
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V ++GTL+ WG G++G G R PE+V + ++++ + G+H A A D
Sbjct: 188 VKANGTLWAWG--RSGRIGLGDSGDRDEPEQVG-VDNDWIALSAGGSHTVAVKA-----D 239
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGA----FTPNTI------ICQVSCGSVHVVALSECG 186
GT LW WG+N N +L G +TP + ++S G H +A+ G
Sbjct: 240 GT-----LWAWGRN---NAGQLGLGDTNHHYTPTQVGTDTDWAKKISAGRRHSLAVKADG 291
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
L AWG NEYGQLG G T E P + + +S G HS AV +
Sbjct: 292 SLWAWGDNEYGQLGLGDTDE-RHAPEQVGSNTDW----------AAISAGRRHSLAVKAD 340
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
G +++WG GQLG L P +V A + V+ GG HS A+ + G L
Sbjct: 341 GSLWSWGYNDSGQLG---LGDTADRNAPEQVGADTDWDL--VSAGGEHSLAVKADGTLMV 395
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRI 366
WG + GQLGLG DT R+ P+ + +G+ LVA G +HT+ DG +
Sbjct: 396 WGLNHLGQLGLG-------------DTVSRDAPVPIA-SGIALVA-GRNHTVAVNPDGTL 440
Query: 367 HGWGYNSYGQ 376
WG N YGQ
Sbjct: 441 RAWGDNEYGQ 450
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 114/368 (30%), Positives = 166/368 (45%), Gaps = 61/368 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +++ WG N GQ G G + P+Q+ G+N+ W I+ G H+ A
Sbjct: 287 VKADGSLWAWGDNEYGQLGL-GDTDERHAPEQV---------GSNTDWAAISAGRRHSLA 336
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V +DG+L++WG N+ GQLG G R PE+V +++ + G H A A D
Sbjct: 337 VKADGSLWSWGYNDSGQLGLGDTADRNAPEQVGA-DTDWDLVSAGGEHSLAVKA-----D 390
Query: 137 GTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
GT+ VWG N G R A P + G H VA++ G L+A
Sbjct: 391 GTLM-----VWGLNHLGQLGLGDTVSR---DAPVPIASGIALVAGRNHTVAVNPDGTLRA 442
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY-HSAAVSENGEV 249
WG NEYGQLG G+ + + + G A V+ G + HS + ++G +
Sbjct: 443 WGDNEYGQLGLGVMRYIVTPSQTVTGSA-----------WAAVNGGSFNHSLGLRDDGTL 491
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
+ WG + GQLG L D P +V + + A H+ A+ + G L+AWG
Sbjct: 492 WAWGRNNYGQLG---LGDTDDRATPEQVGSHTDWAAVNAAS--YHTLAVKNDGTLWAWGR 546
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGRIHG 368
+ +GQLGL SDT R+ P V + V+ G SHT DG +
Sbjct: 547 NSSGQLGL-------------SDTNDRHTPERVGSDTDWATVSVGQSHTSAVKPDGTLWA 593
Query: 369 WGYNSYGQ 376
WG+N YGQ
Sbjct: 594 WGWNHYGQ 601
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 115/375 (30%), Positives = 158/375 (42%), Gaps = 60/375 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N+ GQ G G P+Q+ G+++ W + HT AV +DGT
Sbjct: 491 LWAWGRNNYGQLGL-GDTDDRATPEQV---------GSHTDWAAVNAASYHTLAVKNDGT 540
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+ WG N GQLG R PE+V +++ ++S G T+A+ + DGT
Sbjct: 541 LWAWGRNSSGQLGLSDTNDRHTPERVGS-DTDWA-TVSVGQSHTSAV----KPDGT---- 590
Query: 143 RLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
LW WG N G RL + VS G H VA+ G L AWG+N
Sbjct: 591 -LWAWGWNHYGQLGLGDTSDRLSPEQVGGESNWLAVSTGLHHTVAVKTDGTLWAWGWNVR 649
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG G T + P + + VS Y + AV +G ++ WG +
Sbjct: 650 GQLGLGHTSD-RHAPVQVGSDTDW----------AAVSASGYRTLAVKADGTLWAWGENN 698
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
GQLG L D P +V D + V+ G H+ A L+AWG + GQLG
Sbjct: 699 NGQLG---LGDTDNRNTPAQV-GNDADWAA-VSTGLFHTLAFKEDDTLWAWGRNHDGQLG 753
Query: 317 LGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
LG DT R+ P+ V V+ G HTL M DG + WG N+ G
Sbjct: 754 LG-------------DTDNRDAPVQVGNETDWSTVSGGGYHTLATMSDGTLRAWGLNTSG 800
Query: 376 QAANEKSTYAWYPSP 390
Q W+ P
Sbjct: 801 QLGQRT---MWFDQP 812
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 166/389 (42%), Gaps = 60/389 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ K+ +W + SG+ G G P+Q+ G ++ W+ ++ G HT A
Sbjct: 186 VAVKANGTLWAWGRSGRIGL-GDSGDRDEPEQV---------GVDNDWIALSAGGSHTVA 235
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V +DGTL+ WG N GQLG G P +V +++ K IS G + A+ + D
Sbjct: 236 VKADGTLWAWGRNNAGQLGLGDTNHHYTPTQVGT-DTDWAKKISAGRRHSLAV----KAD 290
Query: 137 GTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
G+ LW WG N+ G R NT +S G H +A+ G L +
Sbjct: 291 GS-----LWAWGDNEYGQLGLGDTDERHAPEQVGSNTDWAAISAGRRHSLAVKADGSLWS 345
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WGYN+ GQLG G T + P + + VS G HS AV +G +
Sbjct: 346 WGYNDSGQLGLGDTAD-RNAPEQVGADTDW----------DLVSAGGEHSLAVKADGTLM 394
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
WGL +GQLG S D + +AL G H+ A+ G L AWG +
Sbjct: 395 VWGLNHLGQLGLGDTVSRDAPVPIASGIAL--------VAGRNHTVAVNPDGTLRAWGDN 446
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWG 370
+ GQLGLG + + P+++ T NG +H+L DG + WG
Sbjct: 447 EYGQLGLG--VMRYIVTPSQTVTG----SAWAAVNGGSF-----NHSLGLRDDGTLWAWG 495
Query: 371 YNSYGQ----AANEKSTYAWYPSPVDWCV 395
N+YGQ ++++T S DW
Sbjct: 496 RNNYGQLGLGDTDDRATPEQVGSHTDWAA 524
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 122/429 (28%), Positives = 174/429 (40%), Gaps = 91/429 (21%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +++ WGYN SGQ G G P+Q+ GA++ W ++ G EH+ A
Sbjct: 337 VKADGSLWSWGYNDSGQLGL-GDTADRNAPEQV---------GADTDWDLVSAGGEHSLA 386
Query: 77 VASDGTLFTWGANEFGQLGDGTE----------------EGRKHPEKVK----------- 109
V +DGTL WG N GQLG G GR H V
Sbjct: 387 VKADGTLMVWGLNHLGQLGLGDTVSRDAPVPIASGIALVAGRNHTVAVNPDGTLRAWGDN 446
Query: 110 ---QLQSEFVKSISCGAHCTAAIAEPRENDGTISTS-------RLWVWGQNQGSNFPRLF 159
QL ++ I + A N G+ + S LW WG+N N+ +L
Sbjct: 447 EYGQLGLGVMRYIVTPSQTVTGSAWAAVNGGSFNHSLGLRDDGTLWAWGRN---NYGQLG 503
Query: 160 WGAF----TP-----NTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQG 210
G TP +T V+ S H +A+ G L AWG N GQLG T +
Sbjct: 504 LGDTDDRATPEQVGSHTDWAAVNAASYHTLAVKNDGTLWAWGRNSSGQLGLSDTNDRHTP 563
Query: 211 PRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK 270
RV + + T VS G+ H++AV +G ++ WG GQLG L
Sbjct: 564 ERV----------GSDTDWAT-VSVGQSHTSAVKPDGTLWAWGWNHYGQLG---LGDTSD 609
Query: 271 ELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNE 330
L P +V V+ G H+ A+ + G L+AWG + GQLGLG + + +
Sbjct: 610 RLSPEQVGGESNWLA--VSTGLHHTVAVKTDGTLWAWGWNVRGQLGLGHTSDRHAPVQVG 667
Query: 331 SDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ----AANEKSTYAW 386
SDT + + A G+ TL DG + WG N+ GQ + ++T A
Sbjct: 668 SDTDWAAVS-----------ASGY-RTLAVKADGTLWAWGENNNGQLGLGDTDNRNTPAQ 715
Query: 387 YPSPVDWCV 395
+ DW
Sbjct: 716 VGNDADWAA 724
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 115/264 (43%), Gaps = 38/264 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ ++ WG+NH GQ G +L P+Q+ G S WL ++ G HT A
Sbjct: 585 VKPDGTLWAWGWNHYGQLGLGDTSDRLS-PEQV---------GGESNWLAVSTGLHHTVA 634
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V +DGTL+ WG N GQLG G R P +V +++ ++S + T A+ + D
Sbjct: 635 VKTDGTLWAWGWNVRGQLGLGHTSDRHAPVQVGS-DTDWA-AVSASGYRTLAV----KAD 688
Query: 137 GTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
GT LW WG+N G R + VS G H +A E L A
Sbjct: 689 GT-----LWAWGENNNGQLGLGDTDNRNTPAQVGNDADWAAVSTGLFHTLAFKEDDTLWA 743
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG N GQLG G T + P + + + VS G YH+ A +G +
Sbjct: 744 WGRNHDGQLGLGDT-DNRDAPVQVGNETDW----------STVSGGGYHTLATMSDGTLR 792
Query: 251 TWGLGSVGQLGHCSLQSGDKELLP 274
WGL + GQLG ++ + +P
Sbjct: 793 AWGLNTSGQLGQRTMWFDQPQEVP 816
>gi|442318560|ref|YP_007358581.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441486202|gb|AGC42897.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 866
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 125/385 (32%), Positives = 177/385 (45%), Gaps = 70/385 (18%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A A++ WGYN GQ G G Q+ P QLP S +D+A G HT A++
Sbjct: 516 AGGAVWTWGYNAYGQLG-NGTTTQVVTPTQLP---------GMSGVIDVAAGVNHTVALS 565
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
+DGT+ WG N +GQLG+GT + P+ V +L + V +IS G+ T A+ + DGT
Sbjct: 566 ADGTVAAWGYNAYGQLGNGTTANQLTPQSVPEL--DGVTAISAGSTHTVAL----KADGT 619
Query: 139 ISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQV---------SCGSVHVVALSECGLLQ 189
+ W WG N + +L G FT + QV + G H VA+ G L
Sbjct: 620 V-----WAWGSNL---YGQLGDGTFTHRSSPVQVPSLENVVSIAAGHFHTVAVKGDGTLW 671
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
WGY GQLG G T P + G L ++ G YH+ A+ NG+V
Sbjct: 672 VWGYGPQGQLGLGTTTN-QSVPVQVSG----------LGHAVAIAAGGYHTVALLANGQV 720
Query: 250 YTWGLGSVGQLGHCS-LQSGDKELLP--RRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
+TWG S GQLG + +Q L+P V+AL A GG + L G ++A
Sbjct: 721 WTWGYNSSGQLGDATIIQRYSPVLVPGLTNVIAL--------AAGGYTTAVLKRDGTVWA 772
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRI 366
+G + GQLG G T R+ P + N V ++ G +H + +D +
Sbjct: 773 FGYNPNGQLGDGTTTS-------------RSSPTATLMNSVVDLSSGVNHMMGLRKDAWV 819
Query: 367 HGWGYNSYGQAANEKSTYAWYPSPV 391
GYNS GQ + +T P+PV
Sbjct: 820 RACGYNSAGQLGDGTTTQ--RPTPV 842
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 121/396 (30%), Positives = 171/396 (43%), Gaps = 60/396 (15%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFT 85
WGYN +GQ G G IP Q+ A ++ ++I G HT A DGTL+
Sbjct: 369 WGYNSAGQLG-NGTTTNSSIPVQVA---------ALTQAVEIDAGGYHTLARRQDGTLYA 418
Query: 86 WGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLW 145
WG N +G LG G P +V + GA ++AE R+ L+
Sbjct: 419 WGDNFYGALGTGNTTSSSVPVQVPLSGVRWF-----GAGYYYSVAE-RKKVNMAQVHTLF 472
Query: 146 VWGQN------QGSNFPRLFWGAFTPNTI----ICQVSCGSVHVVALSECGLLQAWGYNE 195
WG N G+ R +P + I + + GS H VAL G + WGYN
Sbjct: 473 AWGHNTNGELGDGTTTQRT-----SPTAVVVSGIVKTAGGSAHSVALGAGGAVWTWGYNA 527
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
YGQLG G T + + P + + V+ G H+ A+S +G V WG
Sbjct: 528 YGQLGNGTTTQ-----------VVTPTQLPGMSGVIDVAAGVNHTVALSADGTVAAWGYN 576
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
+ GQLG+ + +L P+ V LDG+ ++ G H+ AL + G ++AWG + GQL
Sbjct: 577 AYGQLGNGTTA---NQLTPQSVPELDGV--TAISAGSTHTVALKADGTVWAWGSNLYGQL 631
Query: 316 GLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
G G T S + +P L V +A GH HT+ DG + WGY G
Sbjct: 632 GDGTFTHRSSPV---------QVPSL---ENVVSIAAGHFHTVAVKGDGTLWVWGYGPQG 679
Query: 376 QAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
Q +T P V +G +AAGG H+ L
Sbjct: 680 QLGLGTTTNQSVPVQVS-GLGHAVAIAAGGYHTVAL 714
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 187/408 (45%), Gaps = 66/408 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +++ WG N SGQ G R + + P + G ++ + + G EH+ A
Sbjct: 160 VKSGGSLWAWGNNPSGQLGNGQRTQ-----RNAPTRVRGL-----NQVVSASAGAEHSVA 209
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V DG+++TWG+N +GQLGDGT R P +V + S+ V + G+ A A D
Sbjct: 210 VTEDGSVWTWGSNAYGQLGDGTNTLRAVPVQVPGM-SDVVAVAAAGSRTVALKA-----D 263
Query: 137 GTISTSRLWVWGQNQ------GSNFPRLFWGAFTPN-TIICQVSCGSVHVVALSECGLLQ 189
GT+ W WG N G+ L PN + + ++ G H +A+ + G
Sbjct: 264 GTV-----WTWGINSSGELGDGTTTHSLL-PIQVPNLSGVTNIAAGLWHTLAVKKDGSAW 317
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
+WG N YGQLG G T L+ P ++ G L + +S G H+ A+ +G
Sbjct: 318 SWGNNAYGQLGDGTTLNRLR-PVLVAG----------LTGVRALSGGVVHTVALKWDGTA 366
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
+ WG S GQLG+ + + +P +V AL ++ GG H+ A G LYAWG
Sbjct: 367 WGWGYNSAGQLGNGTTTNSS---IPVQVAALTQAV--EIDAGGYHTLARRQDGTLYAWGD 421
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD---GRI 366
+ G LG G T S ++P+ V +GV+ G+ +++ + ++
Sbjct: 422 NFYGALGTGNTTSS-------------SVPVQVPLSGVRWFGAGYYYSVAERKKVNMAQV 468
Query: 367 H---GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
H WG+N+ G+ + +T P+ V V + K A G HS L
Sbjct: 469 HTLFAWGHNTNGELGDGTTTQRTSPTAV--VVSGIVKTAGGSAHSVAL 514
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/346 (30%), Positives = 155/346 (44%), Gaps = 51/346 (14%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++ G HT V S G+L+ WG N GQLG+G R P +V+ L V S S GA +
Sbjct: 150 VSPGVYHTLEVKSGGSLWAWGNNPSGQLGNGQRTQRNAPTRVRGLNQ--VVSASAGAEHS 207
Query: 127 AAIAEPRENDGTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVV 180
A+ E DG++ W WG N G+N R + + V+ V
Sbjct: 208 VAVTE----DGSV-----WTWGSNAYGQLGDGTNTLRAVPVQVPGMSDVVAVAAAGSRTV 258
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
AL G + WG N G+LG G T L + P L +T ++ G +H+
Sbjct: 259 ALKADGTVWTWGINSSGELGDGTTTHSL-----------LPIQVPNLSGVTNIAAGLWHT 307
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
AV ++G ++WG + GQLG + L P V L G ++ ++ G VH+ AL
Sbjct: 308 LAVKKDGSAWSWGNNAYGQLGDGTTL---NRLRPVLVAGLTG--VRALSGGVVHTVALKW 362
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLVACGHSHTL 358
G + WG + AGQLG G T S +IP+ V + V++ A G+ HTL
Sbjct: 363 DGTAWGWGYNSAGQLGNGTTTNS-------------SIPVQVAALTQAVEIDAGGY-HTL 408
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAG 404
+DG ++ WG N YG +T + PV + VR AG
Sbjct: 409 ARRQDGTLYAWGDNFYGALGTGNTTSS--SVPVQVPLSGVRWFGAG 452
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/318 (33%), Positives = 142/318 (44%), Gaps = 56/318 (17%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A + WGYN GQ G QL Q PEL G A I+ G HT A
Sbjct: 564 LSADGTVAAWGYNAYGQLGNGTTANQLT--PQSVPELDGVTA--------ISAGSTHTVA 613
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ +DGT++ WG+N +GQLGDGT R P +V L E V SI+ G T A+ + D
Sbjct: 614 LKADGTVWAWGSNLYGQLGDGTFTHRSSPVQVPSL--ENVVSIAAGHFHTVAV----KGD 667
Query: 137 GTISTSRLWVWGQN-QGSNFPRLFWGAFTPNTIICQVS---------CGSVHVVALSECG 186
GT LWVWG QG +L G T ++ QVS G H VAL G
Sbjct: 668 GT-----LWVWGYGPQG----QLGLGTTTNQSVPVQVSGLGHAVAIAAGGYHTVALLANG 718
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ WGYN GQLG +I+ Y+ L P L + ++ G Y +A + +
Sbjct: 719 QVWTWGYNSSGQLGD---------ATIIQRYSPVL--VPGLTNVIALAAGGYTTAVLKRD 767
Query: 247 GEVYTWGLGSVGQLGH--CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
G V+ +G GQLG + +S L VV D++ G H L +
Sbjct: 768 GTVWAFGYNPNGQLGDGTTTSRSSPTATLMNSVV--------DLSSGVNHMMGLRKDAWV 819
Query: 305 YAWGGSQAGQLGLGPQTR 322
A G + AGQLG G T+
Sbjct: 820 RACGYNSAGQLGDGTTTQ 837
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 60/129 (46%), Gaps = 15/129 (11%)
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
F V+ G H+ + S G+L+AWG + +GQLG G +T+ RN P V
Sbjct: 146 FCPSVSPGVYHTLEVKSGGSLWAWGNNPSGQLGNGQRTQ-------------RNAPTRVR 192
Query: 344 P-NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLA 402
N V + G H++ DG + WG N+YGQ + +T P V + +V +A
Sbjct: 193 GLNQVVSASAGAEHSVAVTEDGSVWTWGSNAYGQLGDGTNTLRAVPVQVP-GMSDVVAVA 251
Query: 403 AGGGHSAVL 411
A G + L
Sbjct: 252 AAGSRTVAL 260
>gi|354485549|ref|XP_003504946.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like
[Cricetulus griseus]
Length = 887
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/344 (30%), Positives = 150/344 (43%), Gaps = 70/344 (20%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
L A G H+ + S+ +++ G N GQLG E+ + PE ++ L
Sbjct: 24 LQAASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTEQPEPIQAL------------- 70
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
GT+ I VSCG H +A+
Sbjct: 71 ------------GTLD----------------------------IDLVSCGKEHSIAVCH 90
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G + AWG GQLG G E P IK KI QVSCG YHS A+S
Sbjct: 91 KGRVFAWGAGSEGQLGIGEFKEINLMPMRIKTLGGI--------KIIQVSCGHYHSLALS 142
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
E+G+V++WG S GQLG +QS + P++V +L+GI + VA GG HS AL+ G
Sbjct: 143 EDGQVFSWGKNSQGQLG-LGMQSSSQAS-PQKVTSLEGIPLAQVAAGGSHSFALSLTGTS 200
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 364
Y WG + GQL L + + + S +N+ GV ++CG+ HT V +DG
Sbjct: 201 YGWGSNSVGQLALSGENSTVQISKPHSIDALKNL-------GVIYISCGYEHTAVLTKDG 253
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
++ +G NS GQ N P V+ G+V K+ G H+
Sbjct: 254 QVFTFGDNSSGQLQNNPRGKRRGPQLVEGIKGQVSKIECGSYHT 297
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 97/188 (51%), Gaps = 18/188 (9%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
++ Q + GE HS + N VY+ G S+GQLG Q+ ++ P + AL + I V
Sbjct: 22 ELLQAASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTEQ---PEPIQALGTLDIDLV 78
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
+CG HS A+ KG ++AWG GQLG+G + + +L+P T G++
Sbjct: 79 SCGKEHSIAVCHKGRVFAWGAGSEGQLGIG-EFKEINLMPMRIKTL----------GGIK 127
Query: 349 L--VACGHSHTLVYMRDGRIHGWGYNSYGQ-AANEKSTYAWYPSPVDWCVG-EVRKLAAG 404
+ V+CGH H+L DG++ WG NS GQ +S+ P V G + ++AAG
Sbjct: 128 IIQVSCGHYHSLALSEDGQVFSWGKNSQGQLGLGMQSSSQASPQKVTSLEGIPLAQVAAG 187
Query: 405 GGHSAVLA 412
G HS L+
Sbjct: 188 GSHSFALS 195
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 49/104 (47%), Gaps = 12/104 (11%)
Query: 274 PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDT 333
PRR+ DG+ + A G HS L S +Y+ G + GQLG Q R E +T
Sbjct: 12 PRRLNGRDGLELLQAASGERHSLLLFSNHRVYSCGDNSLGQLG---QKR-------EQNT 61
Query: 334 YFRNIPILVVPN-GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+ PI + + LV+CG H++ GR+ WG S GQ
Sbjct: 62 E-QPEPIQALGTLDIDLVSCGKEHSIAVCHKGRVFAWGAGSEGQ 104
>gi|431911482|gb|ELK13688.1| Putative E3 ubiquitin-protein ligase HERC3 [Pteropus alecto]
Length = 1017
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 108/312 (34%), Positives = 155/312 (49%), Gaps = 52/312 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G ER+ P+Q+ A A+ + +ACG H+ A++ G
Sbjct: 102 VYTCGLNTKGQLGH---EREGNKPEQIG-------ALADQNIVHVACGESHSLALSDRGQ 151
Query: 83 LFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
LF+WGA GQLG TE+ P +++L + + +SCG HC A A DG
Sbjct: 152 LFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA-----DG--- 203
Query: 141 TSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
+ + WG+N G FP +P + + QV+ G H ALS G
Sbjct: 204 --QFFTWGKNSHGQLGLGKEFP----SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 257
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWG N GQLG E + P + K L +K+ +SCGE H+A ++++G
Sbjct: 258 VFAWGMNNAGQLGLSDE-EDRESP----CHVKLL----RTQKVVYISCGEEHTAVLTKSG 308
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYA 306
V+T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG H+ A S G +YA
Sbjct: 309 GVFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 365
Query: 307 WGGSQAGQLGLG 318
+G GQLG G
Sbjct: 366 FGCGARGQLGTG 377
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 150/306 (49%), Gaps = 30/306 (9%)
Query: 116 VKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQ---NQGSNFPRLFWGAFTPNTIICQV 172
VK ++CG + + + E DG + T L GQ + N P GA I+ V
Sbjct: 83 VKEVACGGNHSVFLLE----DGEVYTCGLNTKGQLGHEREGNKPEQI-GALADQNIV-HV 136
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
+CG H +ALS+ G L +WG GQLG T + + PR+I+ + + I Q
Sbjct: 137 ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ--------QTILQ 188
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
VSCG +H A++ +G+ +TWG S GQLG + + P+RV +L+GI + VA GG
Sbjct: 189 VSCGNWHCLALAADGQFFTWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGG 246
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVAC 352
HS AL+ GA++AWG + AGQLGL + ES + + L+ V ++C
Sbjct: 247 AHSFALSLSGAVFAWGMNNAGQLGLSDEED------RESPCHVK----LLRTQKVVYISC 296
Query: 353 GHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
G HT V + G + +G S GQ ++ P V +G EV ++A G H+
Sbjct: 297 GEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAF 356
Query: 412 ADACSL 417
+ L
Sbjct: 357 VPSSGL 362
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 35/252 (13%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+ ++ WG GQ G E + +P+ + L ++CG+ H A+A+
Sbjct: 149 RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL-------NQQTILQVSCGNWHCLALAA 201
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG FTWG N GQLG G E + P++V+ L+ + ++ G + A++
Sbjct: 202 DGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-------- 253
Query: 139 ISTSRLWVWGQNQGSNF--------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
+ ++ WG N + +SCG H L++ G +
Sbjct: 254 -LSGAVFAWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFT 312
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEV 249
+G GQLG + + RV++ ++TQ++CG H+ A V +G +
Sbjct: 313 FGAGSCGQLGHDSMNDEVNPRRVLELMG---------SEVTQIACGRQHTLAFVPSSGLI 363
Query: 250 YTWGLGSVGQLG 261
Y +G G+ GQLG
Sbjct: 364 YAFGCGARGQLG 375
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPE----LFGCPAGANSRWLDIACGHE 72
+ A + WG N GQ G G+E P Q P+ L G P +A G
Sbjct: 199 LAADGQFFTWGKNSHGQLGL-GKE----FPSQASPQRVRSLEGIPLA------QVAAGGA 247
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
H+ A++ G +F WG N GQLG EE R+ P VK L+++ V ISCG TA + +
Sbjct: 248 HSFALSLSGAVFAWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 307
Query: 133 --RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQ 189
G S +L N N PR + + Q++CG H +A + GL+
Sbjct: 308 GGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 364
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGY 217
A+G GQLG G TC ++ P +KGY
Sbjct: 365 AFGCGARGQLGTGHTC-NVKCPSPVKGY 391
>gi|344284757|ref|XP_003414131.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Loxodonta
africana]
Length = 1050
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 153/312 (49%), Gaps = 52/312 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G ER+ P+Q+ A A+ + +ACG H+ A++ G
Sbjct: 55 VYTCGLNTKGQLGH---EREGNKPEQIG-------ALADQHIVHVACGESHSLALSDRGQ 104
Query: 83 LFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
LF+WGA GQLG TE+ P +++L + + +SCG HC A A DG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA-----DG--- 156
Query: 141 TSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
+ + WG+N G FP +P + + QV+ G H ALS G
Sbjct: 157 --QFFTWGKNSHGQLGLGKEFP----SQASPQRVRSLEGIPLAQVTAGGAHSFALSLSGA 210
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ WG N GQLG + R + K L +K+ +SCGE H+A +++NG
Sbjct: 211 VFGWGMNNAGQLGLSD-----EKDRESPCHVKLL----RTQKVVYISCGEEHTAVLTKNG 261
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYA 306
V+T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG H+ A S G +YA
Sbjct: 262 GVFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 307 WGGSQAGQLGLG 318
+G GQLG G
Sbjct: 319 FGCGARGQLGTG 330
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/341 (30%), Positives = 159/341 (46%), Gaps = 32/341 (9%)
Query: 83 LFTWGANEFGQLGDGTEEG--RKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG GQ G T P+ + VK ++CG + + + E DG +
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLE----DGEVY 56
Query: 141 TSRLWVWGQ---NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T L GQ + N P GA I+ V+CG H +ALS+ G L +WG G
Sbjct: 57 TCGLNTKGQLGHEREGNKPEQI-GALADQHIV-HVACGESHSLALSDRGQLFSWGAGSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG T + + PR+I+ + + I QVSCG +H A++ +G+ +TWG S
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQ--------QTILQVSCGNWHCLALAADGQFFTWGKNSH 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG + + P+RV +L+GI + V GG HS AL+ GA++ WG + AGQLGL
Sbjct: 167 GQLGLG--KEFPSQASPQRVRSLEGIPLAQVTAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+ ES + + L+ V ++CG HT V ++G + +G S GQ
Sbjct: 225 SDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQL 274
Query: 378 ANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
++ P V +G EV ++A G H+ + L
Sbjct: 275 GHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 35/252 (13%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+ ++ WG GQ G E + +P+ + L ++CG+ H A+A+
Sbjct: 102 RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL-------NQQTILQVSCGNWHCLALAA 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG FTWG N GQLG G E + P++V+ L+ + ++ G + A++
Sbjct: 155 DGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVTAGGAHSFALS-------- 206
Query: 139 ISTSRLWVWGQNQGSNF--------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
+ ++ WG N + +SCG H L++ G +
Sbjct: 207 -LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFT 265
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEV 249
+G GQLG + + RV++ ++TQ++CG H+ A V +G +
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGS---------EVTQIACGRQHTLAFVPSSGLI 316
Query: 250 YTWGLGSVGQLG 261
Y +G G+ GQLG
Sbjct: 317 YAFGCGARGQLG 328
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 96/211 (45%), Gaps = 28/211 (13%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPE----LFGCPAGANSRWLDIACGHE 72
+ A + WG N GQ G G+E P Q P+ L G P + G
Sbjct: 152 LAADGQFFTWGKNSHGQLGL-GKE----FPSQASPQRVRSLEGIPLA------QVTAGGA 200
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
H+ A++ G +F WG N GQLG E+ R+ P VK L+++ V ISCG TA +
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT-- 258
Query: 133 RENDGTI-----STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECG 186
+N G S +L N N PR + + Q++CG H +A + G
Sbjct: 259 -KNGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELM--GSEVTQIACGRQHTLAFVPSSG 314
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGY 217
L+ A+G GQLG G TC ++ P +KGY
Sbjct: 315 LIYAFGCGARGQLGTGHTC-NVKCPSPVKGY 344
>gi|408500684|ref|YP_006864603.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465508|gb|AFU71037.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1173
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 121/386 (31%), Positives = 168/386 (43%), Gaps = 65/386 (16%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++Y WG N GQ GR ++ P + PAG ++ ++ G+ + A+ASDG
Sbjct: 728 SLYTWGDNSHGQLGRDTADKPDSHPSKAE-----APAGVT--FVHVSAGYGFSVALASDG 780
Query: 82 TLFTWGANEFGQLGDGTEEGR--KHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDGT 138
+L++WG N GQLG P KV+ FV++ + G+H A +DG
Sbjct: 781 SLYSWGDNSRGQLGRTVTSNNPANRPHKVEAPAGITFVQASAGGSHVVAL-----SSDGN 835
Query: 139 ISTSRLWVWGQNQG--------SNFPRLFWG-AFTP-NTIICQVSCGSVHVVALSECGLL 188
I + WG N SN P G A TP + VS G H VA+ G +
Sbjct: 836 I-----YTWGDNSAGQLGRTVTSNNPADKPGKADTPADVTFTSVSAGQGHTVAVDTQGDV 890
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG N +G+LGR T P G A + P TQ S GE HS AVS++G
Sbjct: 891 YTWGDNTHGELGRSTTSTPADKP----GKA----DTPAGITFTQASAGESHSVAVSDDGS 942
Query: 249 VYTWGLGSVGQLGH-CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
+YTWG + G+LG ++ DK P + G+ + GG HS AL S G+LY W
Sbjct: 943 IYTWGDTANGRLGRDTNITPADK---PGKADTPAGVTFTQASAGGKHSIALGSDGSLYTW 999
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLVYMRDGR 365
G S G PN+ DT P G+ + G S+ L DG
Sbjct: 1000 GDSGKTSAGR----------PNKVDT----------PAGITFTQASAGASYCLALGSDGN 1039
Query: 366 IHGWGYNSYGQAANEKSTYAWYPSPV 391
++ WG N+ GQ + W SP
Sbjct: 1040 LYSWGDNAKGQLGRDTGD-TWSASPA 1064
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 111/384 (28%), Positives = 170/384 (44%), Gaps = 60/384 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I + +Y WG N+ + G E++ P L P G + + ++ G+ H A
Sbjct: 183 IASDGNLYRWGDNNY-KLGTPEDEKRT-------PSLVNPPTGVH--FTQVSTGYTHFLA 232
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSE-FVKSISCGAHCTAAIAEPREN 135
+ SDG L++WG N G+L G E P+ Q+ ++ + + G H T A A +
Sbjct: 233 IGSDGNLYSWGNNADGEL--GRETVSTTPKDNPQIDNQPKLVTPPAGVHFTQACAGKWHS 290
Query: 136 DGTISTSRLWVWGQNQGSNFPRLFWGAF---------TPN--TIICQVSCGSVHVVALSE 184
S L+ WG+N+ R A P T I Q+S G+ + +AL
Sbjct: 291 LALGSDGNLYSWGENKYGELGRDTGSAIYDVKPGKVNLPKGITKITQISAGTFYSMALDS 350
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPE-------LEKITQVSCGE 237
G L +WG N Y +LGR G F D +P ++K T + GE
Sbjct: 351 DGDLYSWGDNTYDELGR------------YAGGYPFRDRSPRKMTMPAGVKKFTWIKAGE 398
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI--FIKDVACGGVHS 295
+ S A S +G +Y+WG GQLG + + ++ PR+V G+ F K V+ HS
Sbjct: 399 WTSLATSSDGSLYSWGWNEYGQLGRNTAPA-RQDRTPRKVTMPAGVTKFTK-VSAEHRHS 456
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL---VAC 352
AL S G LY+WG + QLG + + + P + + P GV V+
Sbjct: 457 LALGSDGNLYSWGLNDCKQLGRDTGSAKYDVKPGK----------VPTPAGVAQFTEVSA 506
Query: 353 GHSHTLVYMRDGRIHGWGYNSYGQ 376
G+SH+L DG ++ WG N YG+
Sbjct: 507 GYSHSLAIGSDGNLYSWGQNKYGE 530
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 110/354 (31%), Positives = 154/354 (43%), Gaps = 60/354 (16%)
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
G H+AAV SDG+L+TWG N GQLG D ++ HP K + +S G + A
Sbjct: 716 GDLHSAAVGSDGSLYTWGDNSHGQLGRDTADKPDSHPSKAEAPAGVTFVHVSAGYGFSVA 775
Query: 129 IAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG---AFTPNTI-------ICQVSCGSVH 178
+A +DG+ L+ WG N R A P+ + Q S G H
Sbjct: 776 LA----SDGS-----LYSWGDNSRGQLGRTVTSNNPANRPHKVEAPAGITFVQASAGGSH 826
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
VVALS G + WG N GQLGR +T P G A + P T VS G+
Sbjct: 827 VVALSSDGNIYTWGDNSAGQLGRTVTS---NNPADKPGKA----DTPADVTFTSVSAGQG 879
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQS-GDKELLPRRVVALDGIFIKDVACGGVHSCA 297
H+ AV G+VYTWG + G+LG + + DK P + GI + G HS A
Sbjct: 880 HTVAVDTQGDVYTWGDNTHGELGRSTTSTPADK---PGKADTPAGITFTQASAGESHSVA 936
Query: 298 LTSKGALYAWGGSQAGQLG----LGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--A 351
++ G++Y WG + G+LG + P + P ++DT P GV +
Sbjct: 937 VSDDGSIYTWGDTANGRLGRDTNITPADK-----PGKADT----------PAGVTFTQAS 981
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGG 405
G H++ DG ++ WG + T A P+ VD G A+ G
Sbjct: 982 AGGKHSIALGSDGSLYTWG--------DSGKTSAGRPNKVDTPAGITFTQASAG 1027
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 152/349 (43%), Gaps = 56/349 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLP-----PELFGCPAGANSRWLDIAC-GHEHTAA 76
+Y WG N G+ GR E PK P P+L PAG + AC G H+ A
Sbjct: 239 LYSWGNNADGELGR---ETVSTTPKDNPQIDNQPKLVTPPAGVH---FTQACAGKWHSLA 292
Query: 77 VASDGTLFTWGANEFGQLGDGTEEG--RKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPR 133
+ SDG L++WG N++G+LG T P KV + + IS G + A+
Sbjct: 293 LGSDGNLYSWGENKYGELGRDTGSAIYDVKPGKVNLPKGITKITQISAGTFYSMAL---- 348
Query: 134 ENDGTISTSRLWVWGQNQGSNFPRLFWGAF-----TPNTIICQ--------VSCGSVHVV 180
++DG L+ WG N R + G + +P + + G +
Sbjct: 349 DSDG-----DLYSWGDNTYDELGR-YAGGYPFRDRSPRKMTMPAGVKKFTWIKAGEWTSL 402
Query: 181 ALSECGLLQAWGYNEYGQLGRGIT-CEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
A S G L +WG+NEYGQLGR + PR + A + K T+VS H
Sbjct: 403 ATSSDGSLYSWGWNEYGQLGRNTAPARQDRTPRKVTMPAG-------VTKFTKVSAEHRH 455
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF-IKDVACGGVHSCAL 298
S A+ +G +Y+WGL QLG + S ++ P +V G+ +V+ G HS A+
Sbjct: 456 SLALGSDGNLYSWGLNDCKQLGRDT-GSAKYDVKPGKVPTPAGVAQFTEVSAGYSHSLAI 514
Query: 299 TSKGALYAWGGSQAGQLGL--------GPQTRSFSLIPNESDTYFRNIP 339
S G LY+WG ++ G+LG P +F P D F P
Sbjct: 515 GSDGNLYSWGQNKYGELGRPTSGKYDSSPGMVAFPEDPKPVDVSFSGTP 563
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 160/388 (41%), Gaps = 57/388 (14%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ E + A+ASDG L+ WG N + +LG +E ++ P V +S G
Sbjct: 173 VPAKEEGSQAIASDGNLYRWGDNNY-KLGTPEDE-KRTPSLVNPPTGVHFTQVSTGYTHF 230
Query: 127 AAIAEPRENDGTISTSRLWVWGQN------------------QGSNFPRLFWGAFTPNTI 168
AI S L+ WG N Q N P+L TP
Sbjct: 231 LAIG---------SDGNLYSWGNNADGELGRETVSTTPKDNPQIDNQPKLV----TPPAG 277
Query: 169 I--CQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPE 226
+ Q G H +AL G L +WG N+YG+LGR G + ++
Sbjct: 278 VHFTQACAGKWHSLALGSDGNLYSWGENKYGELGRDT------GSAIYDVKPGKVNLPKG 331
Query: 227 LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI-FI 285
+ KITQ+S G ++S A+ +G++Y+WG + +LG + ++ PR++ G+
Sbjct: 332 ITKITQISAGTFYSMALDSDGDLYSWGDNTYDELGRYAGGYPFRDRSPRKMTMPAGVKKF 391
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
+ G S A +S G+LY+WG ++ GQLG + P D R + +
Sbjct: 392 TWIKAGEWTSLATSSDGSLYSWGWNEYGQLGR-------NTAPARQDRTPRKVTMPAGVT 444
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAW------YPSPVDWCVGEVR 399
V+ H H+L DG ++ WG N Q + + + P+P V +
Sbjct: 445 KFTKVSAEHRHSLALGSDGNLYSWGLNDCKQLGRDTGSAKYDVKPGKVPTPA--GVAQFT 502
Query: 400 KLAAGGGHSAVLADACSLKELCEFRLAE 427
+++AG HS + +L + + E
Sbjct: 503 EVSAGYSHSLAIGSDGNLYSWGQNKYGE 530
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 122/273 (44%), Gaps = 22/273 (8%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I Q G +H A+ G L WG N +GQLGR + P EAP
Sbjct: 710 ISQADGGDLHSAAVGSDGSLYTWGDNSHGQLGRDTADKPDSHPSKA--------EAPAGV 761
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
VS G S A++ +G +Y+WG S GQLG ++ S + P +V A GI
Sbjct: 762 TFVHVSAGYGFSVALASDGSLYSWGDNSRGQLGR-TVTSNNPANRPHKVEAPAGITFVQA 820
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
+ GG H AL+S G +Y WG + AGQLG + + + P ++DT P V
Sbjct: 821 SAGGSHVVALSSDGNIYTWGDNSAGQLGRTVTSNNPADKPGKADT-----PADVT---FT 872
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQ-AANEKSTYAWYPSPVDWCVG-EVRKLAAGGG 406
V+ G HT+ G ++ WG N++G+ + ST A P D G + +AG
Sbjct: 873 SVSAGQGHTVAVDTQGDVYTWGDNTHGELGRSTTSTPADKPGKADTPAGITFTQASAGES 932
Query: 407 HSAVLADACSLK---ELCEFRLAESVTLSNASE 436
HS ++D S+ + RL ++ A +
Sbjct: 933 HSVAVSDDGSIYTWGDTANGRLGRDTNITPADK 965
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 75/150 (50%), Gaps = 14/150 (9%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
+I+Q G+ HSAAV +G +YTWG S GQLG + D P + A G+ V
Sbjct: 709 RISQADGGDLHSAAVGSDGSLYTWGDNSHGQLGRDTADKPDSH--PSKAEAPAGVTFVHV 766
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
+ G S AL S G+LY+WG + GQLG + + + P++ + P G+
Sbjct: 767 SAGYGFSVALASDGSLYSWGDNSRGQLGRTVTSNNPANRPHK----------VEAPAGIT 816
Query: 349 LV--ACGHSHTLVYMRDGRIHGWGYNSYGQ 376
V + G SH + DG I+ WG NS GQ
Sbjct: 817 FVQASAGGSHVVALSSDGNIYTWGDNSAGQ 846
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 89/194 (45%), Gaps = 17/194 (8%)
Query: 225 PELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF 284
P++ V E S A++ +G +Y WG + +LG D++ P V G+
Sbjct: 165 PDIRFSHIVPAKEEGSQAIASDGNLYRWGDNNY-KLGTPE----DEKRTPSLVNPPTGVH 219
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP 344
V+ G H A+ S G LY+WG + G+LG + S P + + N P LV P
Sbjct: 220 FTQVSTGYTHFLAIGSDGNLYSWGNNADGELGR----ETVSTTPKD-NPQIDNQPKLVTP 274
Query: 345 N-GVQLV-AC-GHSHTLVYMRDGRIHGWGYNSYGQAANEKST--YAWYPSPVDWCVG--E 397
GV AC G H+L DG ++ WG N YG+ + + Y P V+ G +
Sbjct: 275 PAGVHFTQACAGKWHSLALGSDGNLYSWGENKYGELGRDTGSAIYDVKPGKVNLPKGITK 334
Query: 398 VRKLAAGGGHSAVL 411
+ +++AG +S L
Sbjct: 335 ITQISAGTFYSMAL 348
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 18/135 (13%)
Query: 23 IYVWGYNHSGQTGRK-GRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG N Q GR G + P ++P PAG +++ +++ G+ H+ A+ SDG
Sbjct: 465 LYSWGLNDCKQLGRDTGSAKYDVKPGKVP-----TPAGV-AQFTEVSAGYSHSLAIGSDG 518
Query: 82 TLFTWGANEFGQLG-------DGTEEGRKHPEKVKQLQSEFV----KSISCGAHCTAAIA 130
L++WG N++G+LG D + PE K + F ++ + T ++
Sbjct: 519 NLYSWGQNKYGELGRPTSGKYDSSPGMVAFPEDPKPVDVSFSGTPGTNLDPNSDGTWSVT 578
Query: 131 EPRENDGTISTSRLW 145
P + G + T W
Sbjct: 579 TPPHDHGRVDTVITW 593
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 19/163 (11%)
Query: 282 GIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL 341
GI I G +HS A+ S G+LY WG + GQLG R + P+ +
Sbjct: 707 GIRISQADGGDLHSAAVGSDGSLYTWGDNSHGQLG-----RDTADKPDSHPSKAE----- 756
Query: 342 VVPNGVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTY--AWYPSPVDWCVG- 396
P GV V+ G+ ++ DG ++ WG NS GQ ++ A P V+ G
Sbjct: 757 -APAGVTFVHVSAGYGFSVALASDGSLYSWGDNSRGQLGRTVTSNNPANRPHKVEAPAGI 815
Query: 397 EVRKLAAGGGHSAVLADACSLK---ELCEFRLAESVTLSNASE 436
+ +AGG H L+ ++ + +L +VT +N ++
Sbjct: 816 TFVQASAGGSHVVALSSDGNIYTWGDNSAGQLGRTVTSNNPAD 858
>gi|149033226|gb|EDL88027.1| hect domain and RLD 3 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 909
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 154/312 (49%), Gaps = 52/312 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G ER+ P+Q+ A A+ + +ACG H+ A++ G
Sbjct: 55 VYTCGVNTKGQLGH---EREGNKPEQIG-------ALADQHIIHVACGESHSLALSDRGQ 104
Query: 83 LFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
LF+WGA GQLG TE+ P +++L + + +SCG HC A A DG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA-----DG--- 156
Query: 141 TSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
+ + WG+N G FP +P + + QV+ G H ALS G
Sbjct: 157 --QFFTWGKNSHGQLGLGKEFP----SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ WG N GQLG + R + K L +K+ +SCGE H+A ++++G
Sbjct: 211 VFGWGMNNAGQLGLSD-----EKDRESPCHVKLL----RTQKVVYISCGEEHTAVLTKSG 261
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYA 306
V+T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG H+ AL S G +YA
Sbjct: 262 GVFTFGAGSCGQLGHDSV---NDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYA 318
Query: 307 WGGSQAGQLGLG 318
+G GQLG G
Sbjct: 319 FGCGAKGQLGTG 330
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/341 (30%), Positives = 161/341 (47%), Gaps = 32/341 (9%)
Query: 83 LFTWGANEFGQLG--DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG GQ G + P+ + + +K ++CG + + + E DG +
Sbjct: 1 MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLE----DGEVY 56
Query: 141 TSRLWVWGQ---NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + GQ + N P GA II V+CG H +ALS+ G L +WG G
Sbjct: 57 TCGVNTKGQLGHEREGNKPEQI-GALADQHII-HVACGESHSLALSDRGQLFSWGAGSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG T + + PR+I+ + + I QVSCG +H A++ +G+ +TWG S
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQ--------QTILQVSCGNWHCLALAADGQFFTWGKNSH 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG + + P+RV +L+GI + VA GG HS AL+ GA++ WG + AGQLGL
Sbjct: 167 GQLGLG--KEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+ ES + + L+ V ++CG HT V + G + +G S GQ
Sbjct: 225 SDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Query: 378 ANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
++ P V +G EV ++A G H+ L + L
Sbjct: 275 GHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGL 315
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 35/252 (13%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+ ++ WG GQ G E + +P+ + L ++CG+ H A+A+
Sbjct: 102 RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL-------NQQTILQVSCGNWHCLALAA 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG FTWG N GQLG G E + P++V+ L+ + ++ G + A++
Sbjct: 155 DGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS-------- 206
Query: 139 ISTSRLWVWGQNQGSNF--------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
+ ++ WG N + +SCG H L++ G +
Sbjct: 207 -LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFT 265
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS-AAVSENGEV 249
+G GQLG + + RV++ ++TQ++CG H+ A V +G +
Sbjct: 266 FGAGSCGQLGHDSVNDEVNPRRVLELMG---------SEVTQIACGRQHTLALVPSSGLI 316
Query: 250 YTWGLGSVGQLG 261
Y +G G+ GQLG
Sbjct: 317 YAFGCGAKGQLG 328
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPE----LFGCPAGANSRWLDIACGHE 72
+ A + WG N GQ G G+E P Q P+ L G P +A G
Sbjct: 152 LAADGQFFTWGKNSHGQLGL-GKE----FPSQTSPQRVRSLEGIPLA------QVAAGGA 200
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
H+ A++ G +F WG N GQLG E+ R+ P VK L+++ V ISCG TA + +
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260
Query: 133 --RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQ 189
G S +L N N PR + + Q++CG H +AL GL+
Sbjct: 261 GGVFTFGAGSCGQLGHDSVNDEVN-PRRVLELM--GSEVTQIACGRQHTLALVPSSGLIY 317
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGY 217
A+G GQLG G TC ++ P +KG+
Sbjct: 318 AFGCGAKGQLGTGHTC-NVKCPSPVKGH 344
>gi|182416055|ref|YP_001821121.1| cell surface receptor IPT/TIG domain-containing protein [Opitutus
terrae PB90-1]
gi|177843269|gb|ACB77521.1| cell surface receptor IPT/TIG domain protein [Opitutus terrae
PB90-1]
Length = 1848
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 130/441 (29%), Positives = 188/441 (42%), Gaps = 75/441 (17%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPK-QLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WGYN +GQ G I K + ++ G AG + IA G+EH+ A+ASDG
Sbjct: 193 VYAWGYNANGQLGNGSGGLSTDISKVPVAVDMTGVLAG--KTIIAIATGYEHSLALASDG 250
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQ---LQSEFVKSISCGAHCTAAIAEPRENDGT 138
++ WG N GQLGDG+ K P V + L + V +I+ G + + A+A +DGT
Sbjct: 251 IVYAWGDNSEGQLGDGSTTDSKVPMAVDRTGVLTGKTVVAIAAGRNHSLAVA----SDGT 306
Query: 139 ISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-------------ICQVSCGSVHVVALSEC 185
+ + WG N + +L G+ T +++ + V+ G H +A +
Sbjct: 307 V-----YAWGDNY---YAQLGDGSLTDSSVPVPVDLTELAGKSVADVAGGDRHSLAQASD 358
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + AWG N GQ+G I P + G A + I V+ G YH+ A++
Sbjct: 359 GTVYAWGDNTNGQMGDTI-AHLKPAPVSVTG-----GSALAGKTIVAVAAGGYHNLALAS 412
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV---ALDGIFIKDVACGGVHSCALTSKG 302
+G V TWG GQLG+ S +G+K +P V AL G I V G HS AL S G
Sbjct: 413 DGTVCTWGYNYNGQLGNNSSGAGEKSTVPIAVNSYGALPGKTIVAVGAGVSHSLALASDG 472
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
AL WG + GQLG ++ T R +P+ V G+ A G + VY
Sbjct: 473 ALCTWGFNSQGQLG-------------DNSTTNRTVPVTVSAGGLMFQALGTTCDAVY-- 517
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSLKELCE 422
A P P V R L GG + S
Sbjct: 518 ------------------SLALATVPPPTITAVSPSRGLTTGGASVVITGTNFSGASAVM 559
Query: 423 F--RLAESVTLSNASEIEDVA 441
F A T+++A++I A
Sbjct: 560 FGSTAATGFTVNSATQITATA 580
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 116/401 (28%), Positives = 170/401 (42%), Gaps = 55/401 (13%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+P + Y WG N GQ G G + +P A + +A + H+ A
Sbjct: 128 VPPGTVSYAWGDNSKGQLGN-GTGGSMGNKSVVPVAADRSGVLAGKTLVALATSYRHSLA 186
Query: 77 VASDGTLFTWGANEFGQLGDG----TEEGRKHPEKVKQ---LQSEFVKSISCGAHCTAAI 129
+ASDGT++ WG N GQLG+G + + K P V L + + +I+ G + A+
Sbjct: 187 LASDGTVYAWGYNANGQLGNGSGGLSTDISKVPVAVDMTGVLAGKTIIAIATGYEHSLAL 246
Query: 130 AEPRENDGTISTSRLWVWGQNQ----------GSNFPRLF--WGAFTPNTIICQVSCGSV 177
A +DG + + WG N S P G T T++ ++ G
Sbjct: 247 A----SDGIV-----YAWGDNSEGQLGDGSTTDSKVPMAVDRTGVLTGKTVVA-IAAGRN 296
Query: 178 HVVALSECGLLQAWGYNEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG 236
H +A++ G + AWG N Y QLG G +T + P + A + + V+ G
Sbjct: 297 HSLAVASDGTVYAWGDNYYAQLGDGSLTDSSVPVPVDLTELAG--------KSVADVAGG 348
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSC 296
+ HS A + +G VY WG + GQ+G + AL G I VA GG H+
Sbjct: 349 DRHSLAQASDGTVYAWGDNTNGQMGDTIAHLKPAPVSVTGGSALAGKTIVAVAAGGYHNL 408
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG------VQLV 350
AL S G + WG + GQLG + S E T +PI V G + V
Sbjct: 409 ALASDGTVCTWGYNYNGQLG------NNSSGAGEKST----VPIAVNSYGALPGKTIVAV 458
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
G SH+L DG + WG+NS GQ + +T P V
Sbjct: 459 GAGVSHSLALASDGALCTWGFNSQGQLGDNSTTNRTVPVTV 499
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 107/241 (44%), Gaps = 18/241 (7%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H +AL+ G + AWGYN GQLG G GL A + + I ++ G
Sbjct: 183 HSLALASDGTVYAWGYNANGQLGNG--SGGLSTDISKVPVAVDMTGVLAGKTIIAIATGY 240
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
HS A++ +G VY WG S GQLG S + R L G + +A G HS A
Sbjct: 241 EHSLALASDGIVYAWGDNSEGQLGDGSTTDSKVPMAVDRTGVLTGKTVVAIAAGRNHSLA 300
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT 357
+ S G +YAWG + QLG G T S +P + + V VA G H+
Sbjct: 301 VASDGTVYAWGDNYYAQLGDGSLTDSSVPVPVDLTE--------LAGKSVADVAGGDRHS 352
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE------VRKLAAGGGHSAVL 411
L DG ++ WG N+ GQ + + P+PV G + +AAGG H+ L
Sbjct: 353 LAQASDGTVYAWGDNTNGQMGDTIA--HLKPAPVSVTGGSALAGKTIVAVAAGGYHNLAL 410
Query: 412 A 412
A
Sbjct: 411 A 411
>gi|157820833|ref|NP_001102101.1| probable E3 ubiquitin-protein ligase HERC3 [Rattus norvegicus]
gi|149033223|gb|EDL88024.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149033224|gb|EDL88025.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149033225|gb|EDL88026.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 1050
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 154/312 (49%), Gaps = 52/312 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G ER+ P+Q+ A A+ + +ACG H+ A++ G
Sbjct: 55 VYTCGVNTKGQLGH---EREGNKPEQIG-------ALADQHIIHVACGESHSLALSDRGQ 104
Query: 83 LFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
LF+WGA GQLG TE+ P +++L + + +SCG HC A A DG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA-----DG--- 156
Query: 141 TSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
+ + WG+N G FP +P + + QV+ G H ALS G
Sbjct: 157 --QFFTWGKNSHGQLGLGKEFP----SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ WG N GQLG + R + K L +K+ +SCGE H+A ++++G
Sbjct: 211 VFGWGMNNAGQLGLSD-----EKDRESPCHVKLL----RTQKVVYISCGEEHTAVLTKSG 261
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYA 306
V+T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG H+ AL S G +YA
Sbjct: 262 GVFTFGAGSCGQLGHDSV---NDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYA 318
Query: 307 WGGSQAGQLGLG 318
+G GQLG G
Sbjct: 319 FGCGAKGQLGTG 330
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/341 (30%), Positives = 161/341 (47%), Gaps = 32/341 (9%)
Query: 83 LFTWGANEFGQLG--DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG GQ G + P+ + + +K ++CG + + + E DG +
Sbjct: 1 MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLE----DGEVY 56
Query: 141 TSRLWVWGQ---NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + GQ + N P GA II V+CG H +ALS+ G L +WG G
Sbjct: 57 TCGVNTKGQLGHEREGNKPEQI-GALADQHII-HVACGESHSLALSDRGQLFSWGAGSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG T + + PR+I+ + + I QVSCG +H A++ +G+ +TWG S
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQ--------QTILQVSCGNWHCLALAADGQFFTWGKNSH 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG + + P+RV +L+GI + VA GG HS AL+ GA++ WG + AGQLGL
Sbjct: 167 GQLGLG--KEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+ ES + + L+ V ++CG HT V + G + +G S GQ
Sbjct: 225 SDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Query: 378 ANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
++ P V +G EV ++A G H+ L + L
Sbjct: 275 GHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGL 315
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 35/252 (13%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+ ++ WG GQ G E + +P+ + L ++CG+ H A+A+
Sbjct: 102 RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ-------KLNQQTILQVSCGNWHCLALAA 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG FTWG N GQLG G E + P++V+ L+ + ++ G + A++
Sbjct: 155 DGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS-------- 206
Query: 139 ISTSRLWVWGQNQGSNF--------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
+ ++ WG N + +SCG H L++ G +
Sbjct: 207 -LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFT 265
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS-AAVSENGEV 249
+G GQLG + + RV++ ++TQ++CG H+ A V +G +
Sbjct: 266 FGAGSCGQLGHDSVNDEVNPRRVLELMGS---------EVTQIACGRQHTLALVPSSGLI 316
Query: 250 YTWGLGSVGQLG 261
Y +G G+ GQLG
Sbjct: 317 YAFGCGAKGQLG 328
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPE----LFGCPAGANSRWLDIACGHE 72
+ A + WG N GQ G G+E P Q P+ L G P +A G
Sbjct: 152 LAADGQFFTWGKNSHGQLGL-GKE----FPSQTSPQRVRSLEGIPLA------QVAAGGA 200
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
H+ A++ G +F WG N GQLG E+ R+ P VK L+++ V ISCG TA + +
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260
Query: 133 --RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQ 189
G S +L N N PR + + Q++CG H +AL GL+
Sbjct: 261 GGVFTFGAGSCGQLGHDSVNDEVN-PRRVLELM--GSEVTQIACGRQHTLALVPSSGLIY 317
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGY 217
A+G GQLG G TC ++ P +KG+
Sbjct: 318 AFGCGAKGQLGTGHTC-NVKCPSPVKGH 344
>gi|357464765|ref|XP_003602664.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|358348400|ref|XP_003638235.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355491712|gb|AES72915.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355504170|gb|AES85373.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 439
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 105/326 (32%), Positives = 162/326 (49%), Gaps = 45/326 (13%)
Query: 63 RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG 122
R L I+ G H+ A+ S + +WG E GQLG G + R P ++ L ++ + S+ CG
Sbjct: 16 RVLLISAGGSHSVALISGNVVCSWGRGEDGQLGHGDTDDRLLPTQLSALDAQQIVSVVCG 75
Query: 123 AHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQ 171
A T A +E + + W WG +F RL G F P I I Q
Sbjct: 76 ADHTLAYSESKVEVYS------WGWG-----DFGRLGHGNSSDLFIPQPIRALQGLRIKQ 124
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
++CG H +A++ G +Q+WG N+ GQLG G T + L P+ I+ + I
Sbjct: 125 IACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLV-PQKIQTFQGV--------PIK 175
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
V+ G HS A++ENGE+Y WG G G LG L + +P + V++D + VACG
Sbjct: 176 MVAAGAEHSVAITENGELYGWGWGRYGNLG---LGDRNDRCIPEK-VSVDCDKMVLVACG 231
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVA 351
H+ +++S G LY +G S+ GQLG G L+P++ + + + V+
Sbjct: 232 WRHTISVSSSGELYTYGWSKYGQLGHGDCKD--HLVPHKLQAFSDKL--------ICQVS 281
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQA 377
G HT+ G+++GWG+N +GQ
Sbjct: 282 GGWRHTMALTTGGQLYGWGWNKFGQV 307
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 172/380 (45%), Gaps = 57/380 (15%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA-SDGTLF 84
WG GQ G + +L LP +L A + + + CG +HT A + S ++
Sbjct: 39 WGRGEDGQLGHGDTDDRL-----LPTQLSALDA---QQIVSVVCGADHTLAYSESKVEVY 90
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGTISTSR 143
+WG +FG+LG G P+ ++ LQ +K I+CG +HC A E G + +
Sbjct: 91 SWGWGDFGRLGHGNSSDLFIPQPIRALQGLRIKQIACGDSHCLAVTME-----GEVQS-- 143
Query: 144 LWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYNE 195
WG+NQ + P I I V+ G+ H VA++E G L WG+
Sbjct: 144 ---WGRNQNGQLGLGTTEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGR 200
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
YG LG G + +V + + +K+ V+CG H+ +VS +GE+YT+G
Sbjct: 201 YGNLGLGDRNDRCIPEKV----------SVDCDKMVLVACGWRHTISVSSSGELYTYGWS 250
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
GQLGH + L+P ++ A I V+ G H+ ALT+ G LY WG ++ GQ+
Sbjct: 251 KYGQLGHGDCKD---HLVPHKLQAFSDKLICQVSGGWRHTMALTTGGQLYGWGWNKFGQV 307
Query: 316 GLGPQTRSFSLIPNESDTYFRNIPILV-VPNG--VQLVACGHSHTLVYMRDGRIHGWGYN 372
G+G D R P+ V P+ V ++CG HT+ ++ WG
Sbjct: 308 GVG-------------DNVDRCSPVQVKFPHDQKVAQISCGWRHTIAVTEKDNVYSWGRG 354
Query: 373 SYGQAANEKSTYAWYPSPVD 392
+ GQ + YP ++
Sbjct: 355 TNGQLGIGDTIDWNYPKIIE 374
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 143/310 (46%), Gaps = 42/310 (13%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
+K +Y WG+ G+ G G L IP+ + A R IACG H AV
Sbjct: 85 SKVEVYSWGWGDFGRLGH-GNSSDLFIPQPIR-------ALQGLRIKQIACGDSHCLAVT 136
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
+G + +WG N+ GQLG GT E P+K++ Q +K ++ GA + AI E E G
Sbjct: 137 MEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYG- 195
Query: 139 ISTSRLWVWGQNQGSNFPRLFWGAFTPNTI----------ICQVSCGSVHVVALSECGLL 188
W WG+ + L G I + V+CG H +++S G L
Sbjct: 196 ------WGWGR-----YGNLGLGDRNDRCIPEKVSVDCDKMVLVACGWRHTISVSSSGEL 244
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+G+++YGQLG G C+ P ++ ++ L I QVS G H+ A++ G+
Sbjct: 245 YTYGWSKYGQLGHG-DCKDHLVPHKLQAFSDKL--------ICQVSGGWRHTMALTTGGQ 295
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
+Y WG GQ+G + P +V + ++CG H+ A+T K +Y+WG
Sbjct: 296 LYGWGWNKFGQVG---VGDNVDRCSPVQVKFPHDQKVAQISCGWRHTIAVTEKDNVYSWG 352
Query: 309 GSQAGQLGLG 318
GQLG+G
Sbjct: 353 RGTNGQLGIG 362
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 114/212 (53%), Gaps = 23/212 (10%)
Query: 165 PNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
P + +S G H VAL ++ +WG E GQLG G T + R++ LD
Sbjct: 13 PPRRVLLISAGGSHSVALISGNVVCSWGRGEDGQLGHGDTDD-----RLLPTQLSALDA- 66
Query: 225 PELEKITQVSCGEYHSAAVSENG-EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
++I V CG H+ A SE+ EVY+WG G G+LGH + +P+ + AL G+
Sbjct: 67 ---QQIVSVVCGADHTLAYSESKVEVYSWGWGDFGRLGH---GNSSDLFIPQPIRALQGL 120
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
IK +ACG H A+T +G + +WG +Q GQLGLG T SL+P + T F+ +PI
Sbjct: 121 RIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLG--TTEDSLVPQKIQT-FQGVPI--- 174
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
++VA G H++ +G ++GWG+ YG
Sbjct: 175 ----KMVAAGAEHSVAITENGELYGWGWGRYG 202
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 86/191 (45%), Gaps = 15/191 (7%)
Query: 225 PELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF 284
P ++ +S G HS A+ V +WG G GQLGH D LLP ++ ALD
Sbjct: 12 PPPRRVLLISAGGSHSVALISGNVVCSWGRGEDGQLGHGDT---DDRLLPTQLSALDAQQ 68
Query: 285 IKDVACGGVHSCALT-SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
I V CG H+ A + SK +Y+WG G+LG G + F P + R
Sbjct: 69 IVSVVCGADHTLAYSESKVEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGLR------- 121
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLA 402
++ +ACG SH L +G + WG N GQ + + P + G ++ +A
Sbjct: 122 ---IKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQTFQGVPIKMVA 178
Query: 403 AGGGHSAVLAD 413
AG HS + +
Sbjct: 179 AGAEHSVAITE 189
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 27/210 (12%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I +Y WG+ G G R + IP+++ + + + +ACG HT +
Sbjct: 187 ITENGELYGWGWGRYGNLGLGDRNDRC-IPEKVSVDC--------DKMVLVACGWRHTIS 237
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V+S G L+T+G +++GQLG G + P K++ + + +S G T A+
Sbjct: 238 VSSSGELYTYGWSKYGQLGHGDCKDHLVPHKLQAFSDKLICQVSGGWRHTMALT------ 291
Query: 137 GTISTSRLWVWGQNQ------GSNFPRL--FWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ +L+ WG N+ G N R F + + Q+SCG H +A++E +
Sbjct: 292 ---TGGQLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQKVAQISCGWRHTIAVTEKDNV 348
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYA 218
+WG GQLG G T + P++I+ +
Sbjct: 349 YSWGRGTNGQLGIGDTID-WNYPKIIEALS 377
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 14/107 (13%)
Query: 23 IYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG+N GQ G +R + + P + + I+CG HT AV
Sbjct: 296 LYGWGWNKFGQVGVGDNVDRCSPVQVKFP---------HDQKVAQISCGWRHTIAVTEKD 346
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
+++WG GQLG G +P+ ++ L + SCG H ++
Sbjct: 347 NVYSWGRGTNGQLGIGDTIDWNYPKIIEALSVDG----SCGQHIESS 389
>gi|148666329|gb|EDK98745.1| hect domain and RLD 3, isoform CRA_a [Mus musculus]
Length = 913
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 154/312 (49%), Gaps = 52/312 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G ER+ P+Q+ A A+ + +ACG H+ A++ G
Sbjct: 55 VYTCGVNTKGQLGH---EREGNKPEQIG-------ALADQHIIHVACGESHSLALSDRGQ 104
Query: 83 LFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
LF+WGA GQLG TE+ P +++L + + +SCG HC A A DG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA-----DG--- 156
Query: 141 TSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
+ + WG+N G FP +P + + QV+ G H ALS G
Sbjct: 157 --QFFTWGKNSHGQLGLGKEFP----SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ WG N GQLG + R + K L +K+ +SCGE H+A ++++G
Sbjct: 211 VFGWGMNNAGQLGLSD-----EKDRESPCHVKLL----RTQKVVYISCGEEHTAVLTKSG 261
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYA 306
V+T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG H+ AL S G +YA
Sbjct: 262 GVFTFGAGSCGQLGHDSV---NDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYA 318
Query: 307 WGGSQAGQLGLG 318
+G GQLG G
Sbjct: 319 FGCGAKGQLGTG 330
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/341 (30%), Positives = 161/341 (47%), Gaps = 32/341 (9%)
Query: 83 LFTWGANEFGQLG--DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG GQ G + P+ + + +K ++CG + + + E DG +
Sbjct: 1 MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLE----DGEVY 56
Query: 141 TSRLWVWGQ---NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + GQ + N P GA II V+CG H +ALS+ G L +WG G
Sbjct: 57 TCGVNTKGQLGHEREGNKPEQI-GALADQHII-HVACGESHSLALSDRGQLFSWGAGSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG T + + PR+I+ + + I QVSCG +H A++ +G+ +TWG S
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQ--------QTILQVSCGNWHCLALAADGQFFTWGKNSH 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG + + P+RV +L+GI + VA GG HS AL+ GA++ WG + AGQLGL
Sbjct: 167 GQLGLG--KEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+ ES + + L+ V ++CG HT V + G + +G S GQ
Sbjct: 225 SDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Query: 378 ANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
++ P V +G EV ++A G H+ L + L
Sbjct: 275 GHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGL 315
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 35/252 (13%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+ ++ WG GQ G E + +P+ + L ++CG+ H A+A+
Sbjct: 102 RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL-------NQQTILQVSCGNWHCLALAA 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG FTWG N GQLG G E + P++V+ L+ + ++ G + A++
Sbjct: 155 DGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS-------- 206
Query: 139 ISTSRLWVWGQNQGSNF--------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
+ ++ WG N + +SCG H L++ G +
Sbjct: 207 -LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFT 265
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS-AAVSENGEV 249
+G GQLG + + RV++ ++TQ++CG H+ A V +G +
Sbjct: 266 FGAGSCGQLGHDSVNDEVNPRRVLELMG---------SEVTQIACGRQHTLALVPSSGLI 316
Query: 250 YTWGLGSVGQLG 261
Y +G G+ GQLG
Sbjct: 317 YAFGCGAKGQLG 328
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPE----LFGCPAGANSRWLDIACGHE 72
+ A + WG N GQ G G+E P Q P+ L G P +A G
Sbjct: 152 LAADGQFFTWGKNSHGQLGL-GKE----FPSQTSPQRVRSLEGIPLA------QVAAGGA 200
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
H+ A++ G +F WG N GQLG E+ R+ P VK L+++ V ISCG TA + +
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260
Query: 133 --RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQ 189
G S +L N N PR + + Q++CG H +AL GL+
Sbjct: 261 GGVFTFGAGSCGQLGHDSVNDEVN-PRRVLELM--GSEVTQIACGRQHTLALVPSSGLIY 317
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGY 217
A+G GQLG G TC ++ P +KG+
Sbjct: 318 AFGCGAKGQLGTGHTC-NVKCPSPVKGH 344
>gi|27503689|gb|AAH42574.1| Hect domain and RLD 3 [Mus musculus]
Length = 1050
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 154/312 (49%), Gaps = 52/312 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G ER+ P+Q+ A A+ + +ACG H+ A++ G
Sbjct: 55 VYTCGVNTKGQLGH---EREGNKPEQIG-------ALADQHIIHVACGESHSLALSDRGQ 104
Query: 83 LFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
LF+WGA GQLG TE+ P +++L + + +SCG HC A A DG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA-----DG--- 156
Query: 141 TSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
+ + WG+N G FP +P + + QV+ G H ALS G
Sbjct: 157 --QFFTWGKNSHGQLGLGKEFP----SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ WG N GQLG + R + K L +K+ +SCGE H+A ++++G
Sbjct: 211 VFGWGMNNAGQLGLSD-----EKDRESPCHVKLL----RTQKVVYISCGEEHTAVLTKSG 261
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYA 306
V+T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG H+ AL S G +YA
Sbjct: 262 GVFTFGAGSCGQLGHDSV---NDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYA 318
Query: 307 WGGSQAGQLGLG 318
+G GQLG G
Sbjct: 319 FGCGAKGQLGTG 330
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 105/341 (30%), Positives = 161/341 (47%), Gaps = 32/341 (9%)
Query: 83 LFTWGANEFGQLG--DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG GQ G + P+ + + +K ++CG + + + E DG +
Sbjct: 1 MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLE----DGEVY 56
Query: 141 TSRLWVWGQ---NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + GQ + N P GA II V+CG H +ALS+ G L +WG G
Sbjct: 57 TCGVNTKGQLGHEREGNKPEQI-GALADQHII-HVACGESHSLALSDRGQLFSWGAGSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG T + + PR+I+ + + I QVSCG +H A++ +G+ +TWG S
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQ--------QTILQVSCGNWHCLALAADGQFFTWGKNSH 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG + + P+RV +L+GI + VA GG HS AL+ GA++ WG + AGQLGL
Sbjct: 167 GQLGLG--KEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+ ES + + L+ V ++CG HT V + G + +G S GQ
Sbjct: 225 SDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Query: 378 ANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
++ P V +G EV ++A G H+ L + L
Sbjct: 275 GHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGL 315
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 35/252 (13%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+ ++ WG GQ G E + +P+ + L ++CG+ H A+A+
Sbjct: 102 RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ-------KLNQQTILQVSCGNWHCLALAA 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG FTWG N GQLG G E + P++V+ L+ + ++ G + A++
Sbjct: 155 DGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS-------- 206
Query: 139 ISTSRLWVWGQNQGSNF--------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
+ ++ WG N + +SCG H L++ G +
Sbjct: 207 -LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFT 265
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS-AAVSENGEV 249
+G GQLG + + RV++ ++TQ++CG H+ A V +G +
Sbjct: 266 FGAGSCGQLGHDSVNDEVNPRRVLELMG---------SEVTQIACGRQHTLALVPSSGLI 316
Query: 250 YTWGLGSVGQLG 261
Y +G G+ GQLG
Sbjct: 317 YAFGCGAKGQLG 328
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPE----LFGCPAGANSRWLDIACGHE 72
+ A + WG N GQ G G+E P Q P+ L G P +A G
Sbjct: 152 LAADGQFFTWGKNSHGQLGL-GKE----FPSQTSPQRVRSLEGIPLA------QVAAGGA 200
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
H+ A++ G +F WG N GQLG E+ R+ P VK L+++ V ISCG TA + +
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260
Query: 133 --RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQ 189
G S +L N N PR + + Q++CG H +AL GL+
Sbjct: 261 GGVFTFGAGSCGQLGHDSVNDEVN-PRRVLELM--GSEVTQIACGRQHTLALVPSSGLIY 317
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGY 217
A+G GQLG G TC ++ P +KG+
Sbjct: 318 AFGCGAKGQLGTGHTC-NVKCPSPVKGH 344
>gi|115446671|ref|NP_001047115.1| Os02g0554100 [Oryza sativa Japonica Group]
gi|50725773|dbj|BAD33304.1| putative UVB-resistance protein (UVR8) [Oryza sativa Japonica
Group]
gi|113536646|dbj|BAF09029.1| Os02g0554100 [Oryza sativa Japonica Group]
gi|215697683|dbj|BAG91677.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 453
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 100/325 (30%), Positives = 160/325 (49%), Gaps = 48/325 (14%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSE----FVKSISCG 122
I+ G H+ A+ S G + +WG E GQLG G E R P + + + CG
Sbjct: 30 ISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVVICG 89
Query: 123 AHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQ 171
A T A ++ +L+ WG +F RL G F P I I Q
Sbjct: 90 ADHTTAYSDEE--------LQLYSWGWG---DFGRLGHGNSSDVFNPQPIQALQGVRITQ 138
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
++CG H +A++ G + +WG N+ GQLG G T + L P+ I+ + E ++
Sbjct: 139 IACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLL-PQKIQAF--------EGVRVK 189
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
++ G H+AAV+E+G++Y WG G G LG L D L+P +V +++G + VACG
Sbjct: 190 MIAAGAEHTAAVTEDGDLYGWGWGRYGNLG---LGDRDDRLIPEKVSSVNGQKMVLVACG 246
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVA 351
H+ ++S G++Y +G S+ GQLG G L+P++ + + ++
Sbjct: 247 WRHTITVSSSGSIYTYGWSKYGQLGHG--DFEDHLVPHKLEALKDTT--------ISQIS 296
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQ 376
G HT+ DG+++GWG+N +GQ
Sbjct: 297 GGWRHTMALAADGKLYGWGWNKFGQ 321
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 163/384 (42%), Gaps = 60/384 (15%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG-TLF 84
WG GQ G G +P L P G S + CG +HT A + + L+
Sbjct: 49 WGRGEDGQLGH-GDAEDRPVPTVLTAAFDDAPGGVASV---VICGADHTTAYSDEELQLY 104
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGTISTSR 143
+WG +FG+LG G +P+ ++ LQ + I+CG +HC A
Sbjct: 105 SWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACGDSHCLAVTV----------AGH 154
Query: 144 LWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAWG 192
+ WG+NQ +L G + P I + ++ G+ H A++E G L WG
Sbjct: 155 VHSWGRNQNG---QLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWG 211
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
+ YG LG G + L +V + +K+ V+CG H+ VS +G +YT+
Sbjct: 212 WGRYGNLGLGDRDDRLIPEKV---------SSVNGQKMVLVACGWRHTITVSSSGSIYTY 262
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G GQLGH + L+P ++ AL I ++ G H+ AL + G LY WG ++
Sbjct: 263 GWSKYGQLGHGDFED---HLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKF 319
Query: 313 GQLGLGPQTRSFSLI----PNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHG 368
GQ+G+G S + PNE V VACG HTL +
Sbjct: 320 GQVGVGDNEDHCSPVQVNFPNEQK--------------VVQVACGWRHTLALTEAKNVFS 365
Query: 369 WGYNSYGQAANEKSTYAWYPSPVD 392
WG + GQ + + P +D
Sbjct: 366 WGRGTSGQLGHGEIVDRNIPKMID 389
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 148/337 (43%), Gaps = 68/337 (20%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG+ G GR G + P + R IACG H AV G
Sbjct: 103 LYSWGW---GDFGRLGHGNSSDVFNPQPIQAL-----QGVRITQIACGDSHCLAVTVAGH 154
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ +WG N+ GQLG G E P+K++ + VK I+ GA TAA+ E DG +
Sbjct: 155 VHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTE----DGDLYG- 209
Query: 143 RLWVWGQ----NQGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
W WG+ G RL P + + V+CG H + +S G + +
Sbjct: 210 --WGWGRYGNLGLGDRDDRLI-----PEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTY 262
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G+++YGQLG G + L ++ EA + I+Q+S G H+ A++ +G++Y
Sbjct: 263 GWSKYGQLGHGDFEDHLVPHKL---------EALKDTTISQISGGWRHTMALAADGKLYG 313
Query: 252 WGLGSVGQLG------HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
WG GQ+G HCS P +V + + VACG H+ ALT ++
Sbjct: 314 WGWNKFGQVGVGDNEDHCS---------PVQVNFPNEQKVVQVACGWRHTLALTEAKNVF 364
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
+WG +GQLG G + RNIP ++
Sbjct: 365 SWGRGTSGQLGHG-------------EIVDRNIPKMI 388
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 107/212 (50%), Gaps = 19/212 (8%)
Query: 165 PNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
P + +S G+ H VAL G++ +WG E GQLG G E P V+ A F D
Sbjct: 23 PERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHG-DAEDRPVPTVLT--AAFDDAP 79
Query: 225 PELEKITQVSCGEYHSAAVS-ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
+ + V CG H+ A S E ++Y+WG G G+LGH + P+ + AL G+
Sbjct: 80 GGVASV--VICGADHTTAYSDEELQLYSWGWGDFGRLGHG---NSSDVFNPQPIQALQGV 134
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
I +ACG H A+T G +++WG +Q GQLGLG SL+P + F +
Sbjct: 135 RITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLG--NTEDSLLPQKIQA-FEGVR---- 187
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
V+++A G HT DG ++GWG+ YG
Sbjct: 188 ---VKMIAAGAEHTAAVTEDGDLYGWGWGRYG 216
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 96/219 (43%), Gaps = 24/219 (10%)
Query: 207 GLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQ 266
G++ + G + + EAPE + +S G HS A+ G V +WG G GQLGH
Sbjct: 5 GMEMEVEVAGDDEAVPEAPE-RSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGH---- 59
Query: 267 SGDKELLPRRVV---ALD---GIFIKDVACGGVHSCALTSKG-ALYAWGGSQAGQLGLGP 319
GD E P V A D G V CG H+ A + + LY+WG G+LG G
Sbjct: 60 -GDAEDRPVPTVLTAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGN 118
Query: 320 QTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAAN 379
+ F+ P ++ R + +ACG SH L G +H WG N GQ
Sbjct: 119 SSDVFNPQPIQALQGVR----------ITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGL 168
Query: 380 EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
+ + P + G V+ +AAG H+A + + L
Sbjct: 169 GNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDL 207
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 10/99 (10%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLR-IPKQLPPELFGCPAGANSRWLDIACGHEHTA 75
+ A +Y WG+N GQ G E + P E + + +ACG HT
Sbjct: 305 LAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNE---------QKVVQVACGWRHTL 355
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSE 114
A+ +F+WG GQLG G R P+ + L S+
Sbjct: 356 ALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDALSSD 394
>gi|12856817|dbj|BAB30794.1| unnamed protein product [Mus musculus]
Length = 913
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 154/312 (49%), Gaps = 52/312 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G ER+ P+Q+ A A+ + +ACG H+ A++ G
Sbjct: 55 VYTCGVNTKGQLGH---EREGNKPEQIG-------ALADQHIIHVACGESHSLALSDRGQ 104
Query: 83 LFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
LF+WGA GQLG TE+ P +++L + + +SCG HC A A DG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA-----DG--- 156
Query: 141 TSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
+ + WG+N G FP +P + + QV+ G H ALS G
Sbjct: 157 --QFFTWGKNSHGQLGLGKEFP----SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ WG N GQLG + R + K L +K+ +SCGE H+A ++++G
Sbjct: 211 VFGWGMNNAGQLGLSD-----EKDRESPCHVKLL----RTQKVVYISCGEEHTAVLTKSG 261
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYA 306
V+T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG H+ AL S G +YA
Sbjct: 262 GVFTFGAGSCGQLGHDSV---NDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYA 318
Query: 307 WGGSQAGQLGLG 318
+G GQLG G
Sbjct: 319 FGCGAKGQLGTG 330
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 105/341 (30%), Positives = 161/341 (47%), Gaps = 32/341 (9%)
Query: 83 LFTWGANEFGQLG--DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG GQ G + P+ + + +K ++CG + + + E DG +
Sbjct: 1 MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLE----DGEVY 56
Query: 141 TSRLWVWGQ---NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + GQ + N P GA II V+CG H +ALS+ G L +WG G
Sbjct: 57 TCGVNTKGQLGHEREGNKPEQI-GALADQHII-HVACGESHSLALSDRGQLFSWGAGSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG T + + PR+I+ + + I QVSCG +H A++ +G+ +TWG S
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQ--------QTILQVSCGNWHCLALAADGQFFTWGKNSH 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG + + P+RV +L+GI + VA GG HS AL+ GA++ WG + AGQLGL
Sbjct: 167 GQLGLG--KEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+ ES + + L+ V ++CG HT V + G + +G S GQ
Sbjct: 225 SDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Query: 378 ANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
++ P V +G EV ++A G H+ L + L
Sbjct: 275 GHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGL 315
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 35/252 (13%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+ ++ WG GQ G E + +P+ + L ++CG+ H A+A+
Sbjct: 102 RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL-------NQQTILQVSCGNWHCLALAA 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG FTWG N GQLG G E + P++V+ L+ + ++ G + A++
Sbjct: 155 DGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS-------- 206
Query: 139 ISTSRLWVWGQNQGSNF--------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
+ ++ WG N + +SCG H L++ G +
Sbjct: 207 -LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFT 265
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS-AAVSENGEV 249
+G GQLG + + RV++ ++TQ++CG H+ A V +G +
Sbjct: 266 FGAGSCGQLGHDSVNDEVNPRRVLELMG---------SEVTQIACGRQHTLALVPSSGLI 316
Query: 250 YTWGLGSVGQLG 261
Y +G G+ GQLG
Sbjct: 317 YAFGCGAKGQLG 328
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPE----LFGCPAGANSRWLDIACGHE 72
+ A + WG N GQ G G+E P Q P+ L G P +A G
Sbjct: 152 LAADGQFFTWGKNSHGQLGL-GKE----FPSQTSPQRVRSLEGIPLA------QVAAGGA 200
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
H+ A++ G +F WG N GQLG E+ R+ P VK L+++ V ISCG TA + +
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260
Query: 133 --RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQ 189
G S +L N N PR + + Q++CG H +AL GL+
Sbjct: 261 GGVFTFGAGSCGQLGHDSVNDEVN-PRRVLELM--GSEVTQIACGRQHTLALVPSSGLIY 317
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGY 217
A+G GQLG G TC ++ P +KG+
Sbjct: 318 AFGCGAKGQLGTGHTC-NVKCPSPVKGH 344
>gi|188035869|ref|NP_082981.3| hect domain and RLD 3 [Mus musculus]
gi|148666330|gb|EDK98746.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148666331|gb|EDK98747.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148666332|gb|EDK98748.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148877724|gb|AAI45981.1| Hect domain and RLD 3 [Mus musculus]
gi|148877951|gb|AAI45979.1| Hect domain and RLD 3 [Mus musculus]
Length = 1050
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 154/312 (49%), Gaps = 52/312 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G ER+ P+Q+ A A+ + +ACG H+ A++ G
Sbjct: 55 VYTCGVNTKGQLGH---EREGNKPEQIG-------ALADQHIIHVACGESHSLALSDRGQ 104
Query: 83 LFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
LF+WGA GQLG TE+ P +++L + + +SCG HC A A DG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA-----DG--- 156
Query: 141 TSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
+ + WG+N G FP +P + + QV+ G H ALS G
Sbjct: 157 --QFFTWGKNSHGQLGLGKEFP----SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ WG N GQLG + R + K L +K+ +SCGE H+A ++++G
Sbjct: 211 VFGWGMNNAGQLGLSD-----EKDRESPCHVKLL----RTQKVVYISCGEEHTAVLTKSG 261
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYA 306
V+T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG H+ AL S G +YA
Sbjct: 262 GVFTFGAGSCGQLGHDSV---NDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYA 318
Query: 307 WGGSQAGQLGLG 318
+G GQLG G
Sbjct: 319 FGCGAKGQLGTG 330
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 105/341 (30%), Positives = 161/341 (47%), Gaps = 32/341 (9%)
Query: 83 LFTWGANEFGQLG--DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG GQ G + P+ + + +K ++CG + + + E DG +
Sbjct: 1 MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLE----DGEVY 56
Query: 141 TSRLWVWGQ---NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + GQ + N P GA II V+CG H +ALS+ G L +WG G
Sbjct: 57 TCGVNTKGQLGHEREGNKPEQI-GALADQHII-HVACGESHSLALSDRGQLFSWGAGSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG T + + PR+I+ + + I QVSCG +H A++ +G+ +TWG S
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQ--------QTILQVSCGNWHCLALAADGQFFTWGKNSH 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG + + P+RV +L+GI + VA GG HS AL+ GA++ WG + AGQLGL
Sbjct: 167 GQLGLG--KEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+ ES + + L+ V ++CG HT V + G + +G S GQ
Sbjct: 225 SDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Query: 378 ANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
++ P V +G EV ++A G H+ L + L
Sbjct: 275 GHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGL 315
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 35/252 (13%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+ ++ WG GQ G E + +P+ + L ++CG+ H A+A+
Sbjct: 102 RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ-------KLNQQTILQVSCGNWHCLALAA 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG FTWG N GQLG G E + P++V+ L+ + ++ G + A++
Sbjct: 155 DGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS-------- 206
Query: 139 ISTSRLWVWGQNQGSNF--------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
+ ++ WG N + +SCG H L++ G +
Sbjct: 207 -LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFT 265
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS-AAVSENGEV 249
+G GQLG + + RV++ ++TQ++CG H+ A V +G +
Sbjct: 266 FGAGSCGQLGHDSVNDEVNPRRVLELMGS---------EVTQIACGRQHTLALVPSSGLI 316
Query: 250 YTWGLGSVGQLG 261
Y +G G+ GQLG
Sbjct: 317 YAFGCGAKGQLG 328
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPE----LFGCPAGANSRWLDIACGHE 72
+ A + WG N GQ G G+E P Q P+ L G P +A G
Sbjct: 152 LAADGQFFTWGKNSHGQLGL-GKE----FPSQTSPQRVRSLEGIPLA------QVAAGGA 200
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
H+ A++ G +F WG N GQLG E+ R+ P VK L+++ V ISCG TA + +
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260
Query: 133 --RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQ 189
G S +L N N PR + + Q++CG H +AL GL+
Sbjct: 261 GGVFTFGAGSCGQLGHDSVNDEVN-PRRVLELM--GSEVTQIACGRQHTLALVPSSGLIY 317
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGY 217
A+G GQLG G TC ++ P +KG+
Sbjct: 318 AFGCGAKGQLGTGHTC-NVKCPSPVKGH 344
>gi|345494372|ref|XP_001602409.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Nasonia
vitripennis]
Length = 1083
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/369 (30%), Positives = 169/369 (45%), Gaps = 52/369 (14%)
Query: 13 PVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHE 72
P+ IP + +Y WG G+ G G E + + +P EL A A + IACG
Sbjct: 18 PLKLIPNDNNMYCWGSTVYGELGLGGIEDENIL---MPRELDFQKATAVEQ---IACGET 71
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
HT + DG +F+ G N+ GQLG E+ K + + L + K +CGA + A+
Sbjct: 72 HTVLITKDGEVFSCGNNDSGQLGH--EKPTKRLQMIPGLDAFIFKQAACGASHSVAV--- 126
Query: 133 RENDGTISTSRLWVWGQNQGSNF-----------PRLFWGAFTPNTIICQVSCGSVHVVA 181
N G +L+ WG N PR+ T +I+ Q++CG H +A
Sbjct: 127 -NNWG-----QLFCWGSNADGQLGLGTPLTIAHTPRMVKALGT--SIVVQIACGKKHTLA 178
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
L+ G L AWG N GQLG G + P++I G A I ++CG YHS
Sbjct: 179 LTNNGELYAWGSNSDGQLGLGQDVKIETRPKLITGLATI--------PIAFIACGGYHSI 230
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
VS++G V+ WG + GQLG + + +P + L +K VACG S LT
Sbjct: 231 VVSKSGAVFGWGRNTFGQLG---MNDISDKYVPCLLKTLRNAKVKYVACGEEFSVFLTMD 287
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
G ++ G GQLG G N ++ R I I ++ + V ++CG HTL +
Sbjct: 288 GGVFTCGAGMYGQLGHG---------ANSNEILPRQI-IELMGSVVTQISCGKRHTLALV 337
Query: 362 -RDGRIHGW 369
G+++ W
Sbjct: 338 PSRGKVYAW 346
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 141/348 (40%), Gaps = 84/348 (24%)
Query: 71 HEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIA 130
H + +D ++ WG+ +G+LG G E I
Sbjct: 16 HLPLKLIPNDNNMYCWGSTVYGELGLGGIEDEN-------------------------IL 50
Query: 131 EPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
PRE D F T + Q++CG H V +++ G + +
Sbjct: 51 MPRELD--------------------------FQKATAVEQIACGETHTVLITKDGEVFS 84
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
G N+ GQLG + LQ +I G F+ Q +CG HS AV+ G+++
Sbjct: 85 CGNNDSGQLGHEKPTKRLQ---MIPGLDAFI--------FKQAACGASHSVAVNNWGQLF 133
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
WG + GQLG + + PR V AL + +ACG H+ ALT+ G LYAWG +
Sbjct: 134 CWGSNADGQLGLGTPLTIAHT--PRMVKALGTSIVVQIACGKKHTLALTNNGELYAWGSN 191
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-----VPNGVQLVACGHSHTLVYMRDGR 365
GQLGLG D P L+ +P + +ACG H++V + G
Sbjct: 192 SDGQLGLG------------QDVKIETRPKLITGLATIP--IAFIACGGYHSIVVSKSGA 237
Query: 366 IHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRKLAAGGGHSAVLA 412
+ GWG N++GQ + + P + +V+ +A G S L
Sbjct: 238 VFGWGRNTFGQLGMNDISDKYVPCLLKTLRNAKVKYVACGEEFSVFLT 285
>gi|390336982|ref|XP_795107.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Strongylocentrotus purpuratus]
Length = 1391
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 160/334 (47%), Gaps = 29/334 (8%)
Query: 84 FTWGANEFGQLGDGTEEGRKHPEKVKQ---LQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
F WG++ GQLG G G+ E K+ L + V+SISCG H T + + DGT+
Sbjct: 4 FCWGSSMEGQLGIGITGGQTTQEVAKEVTTLSGQRVQSISCGKHHTGIVLD----DGTLY 59
Query: 141 TSRLWVWGQ-NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
GQ Q N + + +I V+CG H +A+S+ G + WG N+ GQ
Sbjct: 60 MCGANSKGQLGQDRNQYKPVQVSALETVVIKHVACGDDHTLAVSDRGQVLGWGRNDRGQC 119
Query: 200 GRGI-TCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVG 258
G E PR++K A + + +V CG HS A++ +G +++WG + G
Sbjct: 120 GLATGDIENKPRPRILKHLASY--------QFVKVCCGSLHSMALTRDGRLFSWGDNTYG 171
Query: 259 QLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLG 318
QLG +L + + P + +L G+ + VACGG HS ALT G+++ WG + GQLGLG
Sbjct: 172 QLGIGTLVTNYTDR-PTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLG 230
Query: 319 PQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
+ T RN+ +V + +ACG HT + DG + +G S GQ
Sbjct: 231 NKEN------KAYPTLLRNMRSQMVKH----IACGQDHTAMLTADGGVFLFGQGSEGQLG 280
Query: 379 NEKSTYAWYPSPV-DWCVGEVRKLAAGGGHSAVL 411
+ + P V D ++ ++ G H+ VL
Sbjct: 281 HGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVL 314
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 174/385 (45%), Gaps = 55/385 (14%)
Query: 22 AIYVWGYNHSGQ--TGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
A + WG + GQ G G + + K++ + R I+CG HT V
Sbjct: 2 ATFCWGSSMEGQLGIGITGGQTTQEVAKEVT-------TLSGQRVQSISCGKHHTGIVLD 54
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
DGTL+ GAN GQLG + + P +V L++ +K ++CG T A+++ + G
Sbjct: 55 DGTLYMCGANSKGQLGQ--DRNQYKPVQVSALETVVIKHVACGDDHTLAVSDRGQVLG-- 110
Query: 140 STSRLWVWGQNQG----------SNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQ 189
WG+N N PR + +V CGS+H +AL+ G L
Sbjct: 111 -------WGRNDRGQCGLATGDIENKPRPRILKHLASYQFVKVCCGSLHSMALTRDGRLF 163
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE--KITQVSCGEYHSAAVSENG 247
+WG N YGQLG G ++ Y E L + +V+CG +HS A++ +G
Sbjct: 164 SWGDNTYGQLGIGT---------LVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISG 214
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
V+ WG VGQLG L + + + P + + +K +ACG H+ LT+ G ++ +
Sbjct: 215 SVFGWGKNDVGQLG---LGNKENKAYPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLF 271
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRI 366
G GQLG G N ++ R + I ++ + + V CG HTLV GR+
Sbjct: 272 GQGSEGQLGHG---------SNYNEVNPRKV-IDLMGSDITQVTCGKHHTLVLEGSKGRL 321
Query: 367 HGWGYNSYGQAANEKSTYAWYPSPV 391
+ +G +GQ +++ P V
Sbjct: 322 YAFGQGIHGQLGQDEARSCSNPQRV 346
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 179/421 (42%), Gaps = 54/421 (12%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++++G GQ G ++ K + +L G S + CG HT
Sbjct: 262 LTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVI--DLMG------SDITQVTCGKHHTLV 313
Query: 77 V-ASDGTLFTWGANEFGQLGDGTEEGRKHPEKV-------------KQLQSEFVKSISCG 122
+ S G L+ +G GQLG +P++V + V+ I G
Sbjct: 314 LEGSKGRLYAFGQGIHGQLGQDEARSCSNPQRVPGPWVPHSSTEKNSSSKGRVVRCIYAG 373
Query: 123 AHCTAAIAEPRENDGTIS------TSRLW---VWGQNQGSNFPRLFWGAFTPNTIICQVS 173
H + A +D I ++R++ +I V+
Sbjct: 374 GHHCFSTATNAADDIQIKLLFRDISTRIFFQLTXXXXXXXXXXXXXXXXXLETVVIKHVA 433
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGI-TCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
CG H +A+S+ + WG N+ GQ G E PR+++ A + + +
Sbjct: 434 CGDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRILRHLASY--------QFVK 485
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
V CG HS A++ +G +++WG + GQLG +L + + P + +L G+ + VACGG
Sbjct: 486 VCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDR-PTELTSLRGVPLVRVACGG 544
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLG-PQTRSFSLIPNESDTYFRNIPILVVPNGVQLVA 351
HS ALT G+++ WG + GQLGLG + +S+ T RN+ +V + +A
Sbjct: 545 FHSFALTISGSVFGWGKNDVGQLGLGNKENKSYP-------TLLRNMRSQMVKH----IA 593
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV-DWCVGEVRKLAAGGGHSAV 410
CG HT + DG + +G S GQ + + P V D ++ ++ G H+ V
Sbjct: 594 CGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLV 653
Query: 411 L 411
L
Sbjct: 654 L 654
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 130/267 (48%), Gaps = 42/267 (15%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQ--LGDGTEEGRKHPEKVKQLQS-EFVKSISCGA 123
+ACG +HT AV+ + WG N+ GQ L G E + P ++ L S +FVK + CG+
Sbjct: 432 VACGDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRILRHLASYQFVK-VCCGS 490
Query: 124 HCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-------------IC 170
+ A+ DG RL+ WG N + +L G N +
Sbjct: 491 LHSMALTR----DG-----RLFSWGDN---TYGQLGIGTLVTNYTDRPTELTSLRGVPLV 538
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
+V+CG H AL+ G + WG N+ GQLG G E P +++ + +
Sbjct: 539 RVACGGFHSFALTISGSVFGWGKNDVGQLGLG-NKENKSYPTLLRNMRS--------QMV 589
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
++CG+ H+A ++ +G V+ +G GS GQLGH S E+ PR+V+ L G I V C
Sbjct: 590 KHIACGQDHTAMLTADGGVFLFGQGSEGQLGH---GSNYNEVNPRKVIDLMGSDITQVTC 646
Query: 291 GGVHSCALT-SKGALYAWGGSQAGQLG 316
G H+ L SKG LYA+G GQLG
Sbjct: 647 GKHHTLVLEGSKGRLYAFGQGIHGQLG 673
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 119/269 (44%), Gaps = 50/269 (18%)
Query: 26 WGYNHSGQ----TGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
WG N GQ TG + + RI + L A+ +++ + CG H+ A+ DG
Sbjct: 451 WGRNDRGQCGLATGDIENKPRPRILRHL----------ASYQFVKVCCGSLHSMALTRDG 500
Query: 82 TLFTWGANEFGQLGDGT--EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
LF+WG N +GQLG GT P ++ L+ + ++CG + A+ TI
Sbjct: 501 RLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFAL--------TI 552
Query: 140 STSRLWVWGQN----------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQ 189
S S ++ WG+N + ++P L + ++ ++CG H L+ G +
Sbjct: 553 SGS-VFGWGKNDVGQLGLGNKENKSYPTLLRNM--RSQMVKHIACGQDHTAMLTADGGVF 609
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS-ENGE 248
+G GQLG G + +VI ITQV+CG++H+ + G
Sbjct: 610 LFGQGSEGQLGHGSNYNEVNPRKVIDLMG---------SDITQVTCGKHHTLVLEGSKGR 660
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRV 277
+Y +G G GQLG +S P+RV
Sbjct: 661 LYAFGQGIHGQLGQDEARSCSN---PQRV 686
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 88/190 (46%), Gaps = 28/190 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G L G P + +ACG H+ A+ G+
Sbjct: 502 LFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVP------LVRVACGGFHSFALTISGS 555
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F WG N+ GQLG G +E + +P ++ ++S+ VK I+CG TA + DG +
Sbjct: 556 VFGWGKNDVGQLGLGNKENKSYPTLLRNMRSQMVKHIACGQDHTAMLTA----DGGV--- 608
Query: 143 RLWVWGQ------NQGSNF----PRLFWGAFTPNTIICQVSCGSVHVVALS-ECGLLQAW 191
+++GQ GSN+ PR + I QV+CG H + L G L A+
Sbjct: 609 --FLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSD--ITQVTCGKHHTLVLEGSKGRLYAF 664
Query: 192 GYNEYGQLGR 201
G +GQLG+
Sbjct: 665 GQGIHGQLGQ 674
>gi|348529614|ref|XP_003452308.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Oreochromis
niloticus]
Length = 1004
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/312 (34%), Positives = 152/312 (48%), Gaps = 50/312 (16%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++Y G N GQ G + PE+ G A + ++CG H+ AV G
Sbjct: 53 SVYTCGSNSCGQLGHD--------KAGISPEVVG--ALDTQKITMVSCGRGHSMAVNEQG 102
Query: 82 TLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGTI 139
LF WGA + GQLG GT E + P VK+L + + CG HC A DG
Sbjct: 103 QLFAWGAGDGGQLGLGTTETTVRIPRLVKRLCDHRISQVMCGNQHCVAL-----SRDG-- 155
Query: 140 STSRLWVWGQNQGSNFPRLFWGAFTPNTI------------ICQVSCGSVHVVALSECGL 187
+L+ WGQN +L G P+ + + Q++ G H ALS G
Sbjct: 156 ---QLFTWGQNTSG---QLGLGKGEPSKLFPHPLKSLAGIPLAQITAGGDHSFALSLSGA 209
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ WG N GQLG + R + + KFL +K+ +SCG+ H+AA++++G
Sbjct: 210 VFGWGKNRAGQLGLNDKQD-----RAVPCHIKFLRS----QKVVYISCGDEHTAALTKDG 260
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYA 306
++T+G GS GQLGH S S ELLPRRV+ L G + +ACG H+ A S G +YA
Sbjct: 261 GLFTFGDGSWGQLGHGSTNS---ELLPRRVLELMGTEVSQIACGRHHTLAFVPSSGVVYA 317
Query: 307 WGGSQAGQLGLG 318
+G + GQLG G
Sbjct: 318 FGCNSHGQLGTG 329
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 103/335 (30%), Positives = 160/335 (47%), Gaps = 39/335 (11%)
Query: 83 LFTWGANEFGQLGDGTEEGRK-HPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+ WG + GQLG G E+ P +K + CG + + +DG++ T
Sbjct: 1 MLCWGNAKDGQLGIGVEKNPVFEPRNCHVFSGRGLKEVGCGGQHSVFLM----HDGSVYT 56
Query: 142 ---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQ 198
+ G ++ P + GA I VSCG H +A++E G L AWG + GQ
Sbjct: 57 CGSNSCGQLGHDKAGISPEVV-GALDTQKI-TMVSCGRGHSMAVNEQGQLFAWGAGDGGQ 114
Query: 199 LGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVG 258
LG G T ++ PR++K + D +I+QV CG H A+S +G+++TWG + G
Sbjct: 115 LGLGTTETTVRIPRLVK---RLCDH-----RISQVMCGNQHCVALSRDGQLFTWGQNTSG 166
Query: 259 QLGHCSLQSGD-KELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
QLG L G+ +L P + +L GI + + GG HS AL+ GA++ WG ++AGQLGL
Sbjct: 167 QLG---LGKGEPSKLFPHPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGL 223
Query: 318 GPQTRSFSLIPNESDTYFRNIPI---LVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
+D R +P + V ++CG HT +DG + +G S+
Sbjct: 224 -------------NDKQDRAVPCHIKFLRSQKVVYISCGDEHTAALTKDGGLFTFGDGSW 270
Query: 375 GQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
GQ + + P V +G EV ++A G H+
Sbjct: 271 GQLGHGSTNSELLPRRVLELMGTEVSQIACGRHHT 305
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 107/228 (46%), Gaps = 32/228 (14%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG + GQLG G+ + PR ++ + +V CG HS + +G VY
Sbjct: 4 WGNAKDGQLGIGVEKNPVFEPRNCHVFSG--------RGLKEVGCGGQHSVFLMHDGSVY 55
Query: 251 TWGLGSVGQLGHCSLQSGDKE-LLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
T G S GQLGH DK + P V ALD I V+CG HS A+ +G L+AWG
Sbjct: 56 TCGSNSCGQLGH------DKAGISPEVVGALDTQKITMVSCGRGHSMAVNEQGQLFAWGA 109
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRDGRI 366
GQLGLG ++T R IP LV + + V CG+ H + RDG++
Sbjct: 110 GDGGQLGLG-----------TTETTVR-IPRLVKRLCDHRISQVMCGNQHCVALSRDGQL 157
Query: 367 HGWGYNSYGQAANEK-STYAWYPSPVDWCVG-EVRKLAAGGGHSAVLA 412
WG N+ GQ K +P P+ G + ++ AGG HS L+
Sbjct: 158 FTWGQNTSGQLGLGKGEPSKLFPHPLKSLAGIPLAQITAGGDHSFALS 205
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/247 (34%), Positives = 116/247 (46%), Gaps = 31/247 (12%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGR---GITCEGLQGPRVIKGYAKFLDEAPEL 227
+V CG H V L G + G N GQLG GI+ P V+ A +
Sbjct: 37 EVGCGGQHSVFLMHDGSVYTCGSNSCGQLGHDKAGIS------PEVVG--------ALDT 82
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+KIT VSCG HS AV+E G+++ WG G GQLG + ++ + +PR V L I
Sbjct: 83 QKITMVSCGRGHSMAVNEQGQLFAWGAGDGGQLGLGTTETTVR--IPRLVKRLCDHRISQ 140
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
V CG H AL+ G L+ WG + +GQLGLG S L P+ + IP+
Sbjct: 141 VMCGNQHCVALSRDGQLFTWGQNTSGQLGLGKGEPS-KLFPHPLKS-LAGIPL------A 192
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQ-AANEKSTYAWYPSPVDWCVGE-VRKLAAGG 405
Q+ A G H+ G + GWG N GQ N+K A P + + + V ++ G
Sbjct: 193 QITAGG-DHSFALSLSGAVFGWGKNRAGQLGLNDKQDRA-VPCHIKFLRSQKVVYISCGD 250
Query: 406 GHSAVLA 412
H+A L
Sbjct: 251 EHTAALT 257
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 89/187 (47%), Gaps = 19/187 (10%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N SGQ G E P L L G P I G +H+ A++ G
Sbjct: 157 LFTWGQNTSGQLGLGKGEPSKLFPHPLK-SLAGIPLA------QITAGGDHSFALSLSGA 209
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F WG N GQLG ++ R P +K L+S+ V ISCG TAA+ + DG + T
Sbjct: 210 VFGWGKNRAGQLGLNDKQDRAVPCHIKFLRSQKVVYISCGDEHTAALTK----DGGLFTF 265
Query: 143 RLWVWGQ-NQGSN----FPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYNEY 196
WGQ GS PR T + Q++CG H +A + G++ A+G N +
Sbjct: 266 GDGSWGQLGHGSTNSELLPRRVLELM--GTEVSQIACGRHHTLAFVPSSGVVYAFGCNSH 323
Query: 197 GQLGRGI 203
GQLG GI
Sbjct: 324 GQLGTGI 330
Score = 38.5 bits (88), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 10/102 (9%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA-VASDG 81
++ +G GQ G +L +P+++ EL G IACG HT A V S G
Sbjct: 262 LFTFGDGSWGQLGHGSTNSEL-LPRRVL-ELMGTEVS------QIACGRHHTLAFVPSSG 313
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCG 122
++ +G N GQLG G + P VK + SE + I+ G
Sbjct: 314 VVYAFGCNSHGQLGTGILGDARSPFPVKTSVPSEDFRVINIG 355
>gi|218190962|gb|EEC73389.1| hypothetical protein OsI_07634 [Oryza sativa Indica Group]
Length = 448
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/325 (30%), Positives = 160/325 (49%), Gaps = 48/325 (14%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSE----FVKSISCG 122
I+ G H+ A+ S G + +WG E GQLG G E R P + + + CG
Sbjct: 25 ISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVVICG 84
Query: 123 AHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQ 171
A T A ++ +L+ WG +F RL G F P I I Q
Sbjct: 85 ADHTTAYSDEE--------LQLYSWGWG---DFGRLGHGNSSDVFNPQPIQALQGVRITQ 133
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
++CG H +A++ G + +WG N+ GQLG G T + L P+ I+ + E ++
Sbjct: 134 IACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLL-PQKIQAF--------EGVRVK 184
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
++ G H+AAV+E+G++Y WG G G LG L D L+P +V +++G + VACG
Sbjct: 185 MIAAGAEHTAAVTEDGDLYGWGWGRYGNLG---LGDRDDRLIPEKVSSVNGQKMVLVACG 241
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVA 351
H+ ++S G++Y +G S+ GQLG G L+P++ + + ++
Sbjct: 242 WRHTITVSSSGSIYTYGWSKYGQLGHG--DFEDHLVPHKLEALKDTT--------ISQIS 291
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQ 376
G HT+ DG+++GWG+N +GQ
Sbjct: 292 GGWRHTMALAADGKLYGWGWNKFGQ 316
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 163/384 (42%), Gaps = 60/384 (15%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG-TLF 84
WG GQ G G +P L P G S + CG +HT A + + L+
Sbjct: 44 WGRGEDGQLGH-GDAEDRPVPTVLTAAFDDAPGGVASV---VICGADHTTAYSDEELQLY 99
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGTISTSR 143
+WG +FG+LG G +P+ ++ LQ + I+CG +HC A
Sbjct: 100 SWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACGDSHCLAVTV----------AGH 149
Query: 144 LWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAWG 192
+ WG+NQ +L G + P I + ++ G+ H A++E G L WG
Sbjct: 150 VHSWGRNQNG---QLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWG 206
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
+ YG LG G + L +V + +K+ V+CG H+ VS +G +YT+
Sbjct: 207 WGRYGNLGLGDRDDRLIPEKV---------SSVNGQKMVLVACGWRHTITVSSSGSIYTY 257
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G GQLGH + L+P ++ AL I ++ G H+ AL + G LY WG ++
Sbjct: 258 GWSKYGQLGHGDFED---HLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKF 314
Query: 313 GQLGLGPQTRSFSLI----PNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHG 368
GQ+G+G S + PNE V VACG HTL +
Sbjct: 315 GQVGVGDNEDHCSPVQVNFPNEQK--------------VVQVACGWRHTLALTEAKNVFS 360
Query: 369 WGYNSYGQAANEKSTYAWYPSPVD 392
WG + GQ + + P +D
Sbjct: 361 WGRGTSGQLGHGEIVDRNIPKMID 384
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 148/337 (43%), Gaps = 68/337 (20%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG+ G GR G + P + R IACG H AV G
Sbjct: 98 LYSWGW---GDFGRLGHGNSSDVFNPQPIQAL-----QGVRITQIACGDSHCLAVTVAGH 149
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ +WG N+ GQLG G E P+K++ + VK I+ GA TAA+ E DG +
Sbjct: 150 VHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTE----DGDLYG- 204
Query: 143 RLWVWGQ----NQGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
W WG+ G RL P + + V+CG H + +S G + +
Sbjct: 205 --WGWGRYGNLGLGDRDDRLI-----PEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTY 257
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G+++YGQLG G + L ++ EA + I+Q+S G H+ A++ +G++Y
Sbjct: 258 GWSKYGQLGHGDFEDHLVPHKL---------EALKDTTISQISGGWRHTMALAADGKLYG 308
Query: 252 WGLGSVGQLG------HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
WG GQ+G HCS P +V + + VACG H+ ALT ++
Sbjct: 309 WGWNKFGQVGVGDNEDHCS---------PVQVNFPNEQKVVQVACGWRHTLALTEAKNVF 359
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
+WG +GQLG G + RNIP ++
Sbjct: 360 SWGRGTSGQLGHG-------------EIVDRNIPKMI 383
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 107/212 (50%), Gaps = 19/212 (8%)
Query: 165 PNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
P + +S G+ H VAL G++ +WG E GQLG G E P V+ A F D
Sbjct: 18 PERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHG-DAEDRPVPTVLT--AAFDDAP 74
Query: 225 PELEKITQVSCGEYHSAAVS-ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
+ + V CG H+ A S E ++Y+WG G G+LGH + P+ + AL G+
Sbjct: 75 GGVASV--VICGADHTTAYSDEELQLYSWGWGDFGRLGHG---NSSDVFNPQPIQALQGV 129
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
I +ACG H A+T G +++WG +Q GQLGLG SL+P + F +
Sbjct: 130 RITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLG--NTEDSLLPQKIQA-FEGVR---- 182
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
V+++A G HT DG ++GWG+ YG
Sbjct: 183 ---VKMIAAGAEHTAAVTEDGDLYGWGWGRYG 211
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 93/212 (43%), Gaps = 24/212 (11%)
Query: 214 IKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL 273
+ G + + EAPE + +S G HS A+ G V +WG G GQLGH GD E
Sbjct: 7 VAGDDEAVPEAPE-RSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGH-----GDAEDR 60
Query: 274 PRRVV---ALD---GIFIKDVACGGVHSCALTSKG-ALYAWGGSQAGQLGLGPQTRSFSL 326
P V A D G V CG H+ A + + LY+WG G+LG G + F+
Sbjct: 61 PVPTVLTAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNP 120
Query: 327 IPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAW 386
P ++ R + +ACG SH L G +H WG N GQ + +
Sbjct: 121 QPIQALQGVR----------ITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSL 170
Query: 387 YPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
P + G V+ +AAG H+A + + L
Sbjct: 171 LPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDL 202
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 10/99 (10%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLR-IPKQLPPELFGCPAGANSRWLDIACGHEHTA 75
+ A +Y WG+N GQ G E + P E + + +ACG HT
Sbjct: 300 LAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNE---------QKVVQVACGWRHTL 350
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSE 114
A+ +F+WG GQLG G R P+ + L S+
Sbjct: 351 ALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDALSSD 389
>gi|408500677|ref|YP_006864596.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465501|gb|AFU71030.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1082
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 126/455 (27%), Positives = 198/455 (43%), Gaps = 73/455 (16%)
Query: 24 YVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG--ANSRWLDIACGHEHTAAVASDG 81
Y WG N SGQ G G Q P Q+ PAG A+ ++ ++ G+ H+ A+ SDG
Sbjct: 587 YAWGDNRSGQLG-NGMTTQQNTPVQV-----KKPAGVSADFTYVQVSAGYRHSLALGSDG 640
Query: 82 TLFTWGANEFGQLGDGTEEGRKH-PEKVKQLQSEF-----VKSISCGAHCTAAIAEPREN 135
++ WG N + QLG+ T G P +V + +K+I A ++A +E
Sbjct: 641 YVYAWGDNTYAQLGNNTSGGYSTVPVRVCDPSTHSNVNTGLKAIQVDAGGEHSLAIDKEG 700
Query: 136 DGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-IC---------------QVSCGSVHV 179
+ +W WG+N+ +++ + +C +V+ G H
Sbjct: 701 N-------VWAWGRNRNGQLGNGTSSSYSSAPVRVCDPEHPTDASKGLVALKVAGGGAHS 753
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQG----PRVIKGYAKFLDEAPELEKITQVSC 235
+A+ G AWG+N YGQLG +T G G P ++ D + L+ + Q+S
Sbjct: 754 LAIDRDGDTWAWGFNSYGQLGNNVTS-GFDGANPVPVRVRDPNNPDDTSKNLKSV-QISA 811
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFI----KDVACG 291
G HS A+ G ++WG G+LG + + + L P RV D I V+ G
Sbjct: 812 GFEHSIAIDAQGNTWSWGWNYWGELGQNT--TNEDILSPARVYNPDNPSIPFKASQVSAG 869
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV----VPNGV 347
S A+ G ++WG + GQLG N D+ N P V PN
Sbjct: 870 YDTSLAVDINGIAWSWGRNTYGQLGYT----------NYDDSRGHNQPAKVRNPASPNNT 919
Query: 348 QL------VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEV--- 398
L V+ G+ H+L +DG +GWGYN YGQ N + A+ P V++ + V
Sbjct: 920 DLSLDSTLVSAGNWHSLAIGKDGYTYGWGYNKYGQLGNNSNKNAYVPMLVEFNLAPVISA 979
Query: 399 -RKLAAGGGHSAVLADACSLKELCEFRLAESVTLS 432
R + G H ++++ S+ L + VT+S
Sbjct: 980 ARFDTSPGTHLTPVSNSNSVTVLTPAHVPGPVTVS 1014
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 138/366 (37%), Gaps = 78/366 (21%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N +GQ G P ++ A L +A G H+ A+ DG
Sbjct: 702 VWAWGRNRNGQLGNGTSSSYSSAPVRVCDPEHPTDASKGLVALKVAGGGAHSLAIDRDGD 761
Query: 83 LFTWGANEFGQLGDGTEEGRK--HPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG N +GQLG+ G +P V+ + +P D T
Sbjct: 762 TWAWGFNSYGQLGNNVTSGFDGANPVPVR-------------------VRDPNNPDDT-- 800
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLG 200
+ N Q+S G H +A+ G +WG+N +G+LG
Sbjct: 801 -----------------------SKNLKSVQISAGFEHSIAIDAQGNTWSWGWNYWGELG 837
Query: 201 RGITCEGLQGPRVIKGYAKFLDEAPELE-KITQVSCGEYHSAAVSENGEVYTWGLGSVGQ 259
+ T E + P + + + P + K +QVS G S AV NG ++WG + GQ
Sbjct: 838 QNTTNEDILSPARV-----YNPDNPSIPFKASQVSAGYDTSLAVDINGIAWSWGRNTYGQ 892
Query: 260 LGHCSLQSGDKELLPRRV----------VALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
LG+ + P +V ++LD V+ G HS A+ G Y WG
Sbjct: 893 LGYTNYDDSRGHNQPAKVRNPASPNNTDLSLDSTL---VSAGNWHSLAIGKDGYTYGWGY 949
Query: 310 SQAGQLGLG-------PQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ GQLG P F+L P S F P G L +S+++ +
Sbjct: 950 NKYGQLGNNSNKNAYVPMLVEFNLAPVISAARFDTSP------GTHLTPVSNSNSVTVLT 1003
Query: 363 DGRIHG 368
+ G
Sbjct: 1004 PAHVPG 1009
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/223 (34%), Positives = 102/223 (45%), Gaps = 19/223 (8%)
Query: 166 NTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAP 225
N+I V SV + A+ G AWG N GQLG G+T + +V K D
Sbjct: 565 NSIGSVVMQNSVSL-AVGSDGNAYAWGDNRSGQLGNGMTTQQNTPVQVKKPAGVSADFT- 622
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV------- 278
QVS G HS A+ +G VY WG + QLG+ + SG +P RV
Sbjct: 623 ----YVQVSAGYRHSLALGSDGYVYAWGDNTYAQLGNNT--SGGYSTVPVRVCDPSTHSN 676
Query: 279 ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
G+ V GG HS A+ +G ++AWG ++ GQLG G + S+S P
Sbjct: 677 VNTGLKAIQVDAGGEHSLAIDKEGNVWAWGRNRNGQLGNG-TSSSYSSAPVR--VCDPEH 733
Query: 339 PILVVPNGVQL-VACGHSHTLVYMRDGRIHGWGYNSYGQAANE 380
P V L VA G +H+L RDG WG+NSYGQ N
Sbjct: 734 PTDASKGLVALKVAGGGAHSLAIDRDGDTWAWGFNSYGQLGNN 776
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 85/193 (44%), Gaps = 34/193 (17%)
Query: 240 SAAVSENGEVYTWGLGSVGQLGH--CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
S AV +G Y WG GQLG+ + Q+ ++ V+ D +++ V+ G HS A
Sbjct: 577 SLAVGSDGNAYAWGDNRSGQLGNGMTTQQNTPVQVKKPAGVSADFTYVQ-VSAGYRHSLA 635
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--------VPNGVQL 349
L S G +YAWG + QLG N + + +P+ V V G++
Sbjct: 636 LGSDGYVYAWGDNTYAQLG------------NNTSGGYSTVPVRVCDPSTHSNVNTGLKA 683
Query: 350 --VACGHSHTLVYMRDGRIHGWGYNSYGQAAN-EKSTYAWYP-------SPVDWCVGEVR 399
V G H+L ++G + WG N GQ N S+Y+ P P D G V
Sbjct: 684 IQVDAGGEHSLAIDKEGNVWAWGRNRNGQLGNGTSSSYSSAPVRVCDPEHPTDASKGLVA 743
Query: 400 -KLAAGGGHSAVL 411
K+A GG HS +
Sbjct: 744 LKVAGGGAHSLAI 756
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 77/188 (40%), Gaps = 54/188 (28%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQL-PPELFGCPAGANSRWLDIACGHEHTA 75
I A+ + WG+N+ G+ G+ + P ++ P+ P A+ ++ G++ +
Sbjct: 819 IDAQGNTWSWGWNYWGELGQNTTNEDILSPARVYNPDNPSIPFKASQ----VSAGYDTSL 874
Query: 76 AVASDGTLFTWGANEFGQLG-DGTEEGRKH--PEKVKQLQSEFVKSISCGAHCTAAIAEP 132
AV +G ++WG N +GQLG ++ R H P KV+ A P
Sbjct: 875 AVDINGIAWSWGRNTYGQLGYTNYDDSRGHNQPAKVRN------------------PASP 916
Query: 133 RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
D ++ ++ VS G+ H +A+ + G WG
Sbjct: 917 NNTDLSLDSTL----------------------------VSAGNWHSLAIGKDGYTYGWG 948
Query: 193 YNEYGQLG 200
YN+YGQLG
Sbjct: 949 YNKYGQLG 956
>gi|444729789|gb|ELW70193.1| putative E3 ubiquitin-protein ligase HERC3 [Tupaia chinensis]
Length = 983
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 153/312 (49%), Gaps = 52/312 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G ER+ P+Q+ A A+ + +ACG H+ A++ G
Sbjct: 55 VYTCGLNTKGQLGH---EREGNKPEQIG-------ALADQHIIHVACGESHSLALSDQGQ 104
Query: 83 LFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
LF+WGA GQLG TE+ P +++L + + +SCG HC A A DG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA-----DG--- 156
Query: 141 TSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
+ + WG+N G FP +P + + QV+ G H ALS G
Sbjct: 157 --QFFTWGKNSHGQLGLGKEFP----SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ WG N GQLG + R + K L +K+ +SCGE H+A ++++G
Sbjct: 211 VFGWGMNNAGQLGLSD-----EKDRESPCHVKLL----RTQKVVYISCGEEHTAVLTKSG 261
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYA 306
V+T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG H+ A S G +YA
Sbjct: 262 GVFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 307 WGGSQAGQLGLG 318
+G GQLG G
Sbjct: 319 FGCGARGQLGTG 330
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 161/341 (47%), Gaps = 32/341 (9%)
Query: 83 LFTWGANEFGQLGDGTE-EG-RKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG GQ G T +G P+ + VK ++CG + + + E DG +
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLE----DGEVY 56
Query: 141 TSRLWVWGQ---NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T L GQ + N P GA II V+CG H +ALS+ G L +WG G
Sbjct: 57 TCGLNTKGQLGHEREGNKPEQI-GALADQHII-HVACGESHSLALSDQGQLFSWGAGSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG T + + PR+I+ + + I QVSCG +H A++ +G+ +TWG S
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQ--------QTILQVSCGNWHCLALAADGQFFTWGKNSH 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG + + P+RV +L+GI + VA GG HS AL+ GA++ WG + AGQLGL
Sbjct: 167 GQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+ ES + + L+ V ++CG HT V + G + +G S GQ
Sbjct: 225 SDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Query: 378 ANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
++ P V +G EV ++A G H+ + L
Sbjct: 275 GHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPE----LFGCPAGANSRWLDIACGHE 72
+ A + WG N GQ G G+E P Q P+ L G P +A G
Sbjct: 152 LAADGQFFTWGKNSHGQLGL-GKE----FPSQASPQRVRSLEGIPLA------QVAAGGA 200
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
H+ A++ G +F WG N GQLG E+ R+ P VK L+++ V ISCG TA + +
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260
Query: 133 --RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQ 189
G S +L N N PR + + Q++CG H +A + GL+
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGY 217
A+G GQLG G TC ++ P +KGY
Sbjct: 318 AFGCGARGQLGTGHTC-NVKCPSPVKGY 344
>gi|375010994|ref|YP_004987982.1| Regulator of chromosome condensation (RCC1) repeat protein
[Owenweeksia hongkongensis DSM 17368]
gi|359346918|gb|AEV31337.1| Regulator of chromosome condensation (RCC1) repeat protein
[Owenweeksia hongkongensis DSM 17368]
Length = 440
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 155/336 (46%), Gaps = 50/336 (14%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ G+ H + DG +FT G N +GQ+GD T E P V++L +K I+ G +
Sbjct: 23 VDAGNGHAIVLDKDGKVFTMGRNNYGQIGDSTYEDHNTPYHVERLPK--IKIIARGYDHS 80
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQ----GSNFPRLFWGAFTPNTII-----CQVSCGSV 177
AI E R+W WG+N GS P F TP ++ V G
Sbjct: 81 LAIDE---------QGRVWAWGRNNYGQLGSAIPIDF---NTPQLVVNHRDFISVEGGHW 128
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPR-VIKGYAKFLDEAPELEKITQVSCG 236
H VAL E G + WG+N YG+LG G T E Q PR V+K + L+ I ++
Sbjct: 129 HTVALKEDGTVWTWGHNFYGELGDG-TREHSQYPRSVVK------KDKTTLQGIVKIVSV 181
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI-FIKDVACGGVHS 295
YH+ A+ +NGEVY+WG G+LGH ++ ++G+ IK +A G HS
Sbjct: 182 GYHTLALDKNGEVYSWGSNDFGELGHF------HNVIQHYAEKVEGLQNIKSIAVGWHHS 235
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS 355
A+ G L+ WG + Q+ + SD + + I +P V+ +ACG
Sbjct: 236 VAINENGELFMWGSDPSTQVR-----------ESTSDHFNSIVKIDSLPPMVK-IACGSW 283
Query: 356 HTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
H+L G++ GWG N YG + + YP +
Sbjct: 284 HSLAIDETGQVWGWGNNRYGMLGTKDTISYTYPKKI 319
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 156/346 (45%), Gaps = 58/346 (16%)
Query: 10 TARPVDNIPAKSAIYVWGYNHS------GQTGRKGRERQLRIPKQLPPELFGCPAGANSR 63
T V+ +P K I GY+HS G+ GR ++ +P + N R
Sbjct: 60 TPYHVERLP-KIKIIARGYDHSLAIDEQGRVWAWGRNNYGQLGSAIPIDFNTPQLVVNHR 118
Query: 64 -WLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV----KQLQSEFVKS 118
++ + GH HT A+ DGT++TWG N +G+LGDGT E ++P V K VK
Sbjct: 119 DFISVEGGHWHTVALKEDGTVWTWGHNFYGELGDGTREHSQYPRSVVKKDKTTLQGIVKI 178
Query: 119 ISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI---------- 168
+S G H A + +G + + WG N +F L G F N I
Sbjct: 179 VSVGYHTLAL-----DKNGEV-----YSWGSN---DFGEL--GHF-HNVIQHYAEKVEGL 222
Query: 169 --ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPE 226
I ++ G H VA++E G L WG + Q+ R T + ++K +D P
Sbjct: 223 QNIKSIAVGWHHSVAINENGELFMWGSDPSTQV-RESTSDHFN--SIVK-----IDSLPP 274
Query: 227 LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
+ KI +CG +HS A+ E G+V+ WG G LG S P+++ G I+
Sbjct: 275 MVKI---ACGSWHSLAIDETGQVWGWGNNRYGMLGTKDTIS---YTYPKKIPGFKG--IE 326
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESD 332
++ G S A+ KG Y +GG+ +GQ G G ++ +P + D
Sbjct: 327 EIGGGCFQSLAIDKKGDFYTFGGNASGQQGQGD--FAYIFVPTKLD 370
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 111/254 (43%), Gaps = 38/254 (14%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
V G+ H + L + G + G N YGQ+G T E P ++ L KI
Sbjct: 22 MVDAGNGHAIVLDKDGKVFTMGRNNYGQIGDS-TYEDHNTPYHVE----------RLPKI 70
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHC---SLQSGDKELLPRRVVALDGIFIKD 287
++ G HS A+ E G V+ WG + GQLG + + R ++++G
Sbjct: 71 KIIARGYDHSLAIDEQGRVWAWGRNNYGQLGSAIPIDFNTPQLVVNHRDFISVEG----- 125
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIP----NESDTYFRNIPILVV 343
G H+ AL G ++ WG + G+LG G TR S P + T + I
Sbjct: 126 ---GHWHTVALKEDGTVWTWGHNFYGELGDG--TREHSQYPRSVVKKDKTTLQGI----- 175
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 403
V++V+ G+ HTL ++G ++ WG N +G+ + + Y V+ + ++ +A
Sbjct: 176 ---VKIVSVGY-HTLALDKNGEVYSWGSNDFGELGHFHNVIQHYAEKVE-GLQNIKSIAV 230
Query: 404 GGGHSAVLADACSL 417
G HS + + L
Sbjct: 231 GWHHSVAINENGEL 244
>gi|357149503|ref|XP_003575134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
distachyon]
Length = 448
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 164/372 (44%), Gaps = 57/372 (15%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
+ A+ WG GQ G G +P L F P A+ + CG +HT A +
Sbjct: 37 SSKAVCSWGRGEDGQLGH-GDAEDRPVPTLLSG--FDVPGIASV----VICGADHTTAYS 89
Query: 79 SDGT-LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPREND 136
+ L++WG +FG+LG G HP+ ++ LQ +K I+CG +HC A
Sbjct: 90 DEQMQLYSWGWGDFGRLGHGNSSDVFHPQPIEALQGIKIKQIACGDSHCLA--------- 140
Query: 137 GTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTIIC--QVSCGSVHVVALSECGLL 188
++ WG+NQ G+ L +C ++ G+ H A+ E G L
Sbjct: 141 -VTDAGQVHSWGRNQNGQLGLGNTEDSLLPQKIHAFEGVCVKMIAAGAEHTAAILEDGDL 199
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG+ +YG LG G + L +V + E EK+ V+CG H+ VS +G+
Sbjct: 200 YGWGWGQYGNLGLGDRNDRLVPEKV---------SSVEGEKMVLVACGWRHTVTVSSSGD 250
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
+YT+G GQLGH + L+P ++ AL FI +A G H+ A+ G LY WG
Sbjct: 251 LYTYGWSKYGQLGHGDFED---HLVPHKLEALKDRFISQIAGGWRHTMAVAGDGKLYGWG 307
Query: 309 GSQAGQLGLGPQTRSFS----LIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 364
++ GQ+G+ S + P+E V VACG HTL +
Sbjct: 308 WNKFGQVGVADNVDHCSPVQVIFPDEQK--------------VAQVACGWRHTLALTENK 353
Query: 365 RIHGWGYNSYGQ 376
+ WG + GQ
Sbjct: 354 NVFSWGRGTSGQ 365
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 157/322 (48%), Gaps = 45/322 (13%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS-CGAHC 125
++ G H+ A+ S + +WG E GQLG G E R P + + S+ CGA
Sbjct: 25 VSAGANHSVALLSSKAVCSWGRGEDGQLGHGDAEDRPVPTLLSGFDVPGIASVVICGADH 84
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSC 174
T A ++ + +L+ WG +F RL G F P I I Q++C
Sbjct: 85 TTAYSDEQ--------MQLYSWGWG---DFGRLGHGNSSDVFHPQPIEALQGIKIKQIAC 133
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G H +A+++ G + +WG N+ GQLG G T + L P+ I + + ++
Sbjct: 134 GDSHCLAVTDAGQVHSWGRNQNGQLGLGNTEDSLL-PQKIHAFEGVC--------VKMIA 184
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVH 294
G H+AA+ E+G++Y WG G G LG L + L+P +V +++G + VACG H
Sbjct: 185 AGAEHTAAILEDGDLYGWGWGQYGNLG---LGDRNDRLVPEKVSSVEGEKMVLVACGWRH 241
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGH 354
+ ++S G LY +G S+ GQLG G L+P++ + + +A G
Sbjct: 242 TVTVSSSGDLYTYGWSKYGQLGHG--DFEDHLVPHKLEALKDRF--------ISQIAGGW 291
Query: 355 SHTLVYMRDGRIHGWGYNSYGQ 376
HT+ DG+++GWG+N +GQ
Sbjct: 292 RHTMAVAGDGKLYGWGWNKFGQ 313
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/313 (31%), Positives = 141/313 (45%), Gaps = 55/313 (17%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG+ G GR G + P E + IACG H AV G
Sbjct: 95 LYSWGW---GDFGRLGHGNSSDVFHPQPIEAL-----QGIKIKQIACGDSHCLAVTDAGQ 146
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ +WG N+ GQLG G E P+K+ + VK I+ GA TAAI E DG +
Sbjct: 147 VHSWGRNQNGQLGLGNTEDSLLPQKIHAFEGVCVKMIAAGAEHTAAILE----DGDLYG- 201
Query: 143 RLWVWGQ----NQGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
W WGQ G RL P + + V+CG H V +S G L +
Sbjct: 202 --WGWGQYGNLGLGDRNDRL-----VPEKVSSVEGEKMVLVACGWRHTVTVSSSGDLYTY 254
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G+++YGQLG G + L ++ EA + I+Q++ G H+ AV+ +G++Y
Sbjct: 255 GWSKYGQLGHGDFEDHLVPHKL---------EALKDRFISQIAGGWRHTMAVAGDGKLYG 305
Query: 252 WGLGSVGQLG------HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
WG GQ+G HCS P +V+ D + VACG H+ ALT ++
Sbjct: 306 WGWNKFGQVGVADNVDHCS---------PVQVIFPDEQKVAQVACGWRHTLALTENKNVF 356
Query: 306 AWGGSQAGQLGLG 318
+WG +GQLG G
Sbjct: 357 SWGRGTSGQLGHG 369
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 149/321 (46%), Gaps = 59/321 (18%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N +GQ G E L +P+++ C IA G EHTAA+ DG
Sbjct: 147 VHSWGRNQNGQLGLGNTEDSL-LPQKIHAFEGVCVKM-------IAAGAEHTAAILEDGD 198
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+ WG ++G LG G R PEKV ++ E + ++CG T ++ S+
Sbjct: 199 LYGWGWGQYGNLGLGDRNDRLVPEKVSSVEGEKMVLVACGWRHTVTVS---------SSG 249
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTI-----------ICQVSCGSVHVVALSECGLLQAW 191
L+ +G S + +L G F + + I Q++ G H +A++ G L W
Sbjct: 250 DLYTYGW---SKYGQLGHGDFEDHLVPHKLEALKDRFISQIAGGWRHTMAVAGDGKLYGW 306
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G+N++GQ+G + +VI P+ +K+ QV+CG H+ A++EN V++
Sbjct: 307 GWNKFGQVGVADNVDHCSPVQVI---------FPDEQKVAQVACGWRHTLALTENKNVFS 357
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVAL-DGIFIKDVACGGVHSCALTSKGALYAWGGS 310
WG G+ GQLGH E++ R + D + + AC + S A
Sbjct: 358 WGRGTSGQLGH-------GEIIDRNTPKMIDALSLDGYACKNLESSKAVPMIA------- 403
Query: 311 QAGQLGLGPQTRSFSLIPNES 331
++ + P R ++L+P+E+
Sbjct: 404 ---EVRITPSAR-YALVPDEN 420
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 115/242 (47%), Gaps = 22/242 (9%)
Query: 165 PNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
P + VS G+ H VAL + +WG E GQLG G E P ++ G+ +
Sbjct: 18 PEQTVALVSAGANHSVALLSSKAVCSWGRGEDGQLGHG-DAEDRPVPTLLSGF-----DV 71
Query: 225 PELEKITQVSCGEYHSAAVS-ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
P + + V CG H+ A S E ++Y+WG G G+LGH + P+ + AL GI
Sbjct: 72 PGIASV--VICGADHTTAYSDEQMQLYSWGWGDFGRLGH---GNSSDVFHPQPIEALQGI 126
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
IK +ACG H A+T G +++WG +Q GQLGLG SL+P + F +
Sbjct: 127 KIKQIACGDSHCLAVTDAGQVHSWGRNQNGQLGLG--NTEDSLLPQKIHA-FEGVC---- 179
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 403
V+++A G HT + DG ++GWG+ YG P V GE L A
Sbjct: 180 ---VKMIAAGAEHTAAILEDGDLYGWGWGQYGNLGLGDRNDRLVPEKVSSVEGEKMVLVA 236
Query: 404 GG 405
G
Sbjct: 237 CG 238
>gi|350587982|ref|XP_003129374.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Sus scrofa]
Length = 1050
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/312 (34%), Positives = 154/312 (49%), Gaps = 52/312 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G ER+ P+Q+ A A+ + +ACG H+ A++ G
Sbjct: 55 VYTCGLNTKGQLGH---EREGNKPEQIG-------ALADEHIVHVACGESHSLALSDRGQ 104
Query: 83 LFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
LF+WGA GQLG TEE P +++L + + +SCG HC A A DG
Sbjct: 105 LFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLALAA-----DG--- 156
Query: 141 TSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
+ + WG+N G FP +P + + QV+ G H ALS G
Sbjct: 157 --QFFTWGKNSHGQLGLGKEFP----SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ WG N GQLG E + P + K L +K+ +SCGE H+A ++++G
Sbjct: 211 VFGWGMNNAGQLGLSDE-EDRESP----CHVKLL----RAQKVVYISCGEEHTAVLTKSG 261
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYA 306
V+T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG H+ A S G +YA
Sbjct: 262 GVFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 307 WGGSQAGQLGLG 318
+G GQLG G
Sbjct: 319 FGCGARGQLGTG 330
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 159/341 (46%), Gaps = 32/341 (9%)
Query: 83 LFTWGANEFGQLGDGT--EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG GQ G T + P+ + VK ++CG + + E DG +
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLLE----DGEVY 56
Query: 141 TSRLWVWGQ---NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T L GQ + N P GA I+ V+CG H +ALS+ G L +WG G
Sbjct: 57 TCGLNTKGQLGHEREGNKPEQI-GALADEHIV-HVACGESHSLALSDRGQLFSWGAGSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG T E + PR+I+ + + I QVSCG +H A++ +G+ +TWG S
Sbjct: 115 QLGLMTTEESVAVPRLIQKLNQ--------QTILQVSCGNWHCLALAADGQFFTWGKNSH 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG + + P+RV +L+GI + VA GG HS AL+ GA++ WG + AGQLGL
Sbjct: 167 GQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+ ES + + L+ V ++CG HT V + G + +G S GQ
Sbjct: 225 SDEED------RESPCHVK----LLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Query: 378 ANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
++ P V +G EV ++A G H+ + L
Sbjct: 275 GHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 170/376 (45%), Gaps = 48/376 (12%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFT 85
WGY GQ G + + Q+ C ++ ++ACG +H+ + DG ++T
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQV------CGFISDRSVKEVACGGDHSVFLLEDGEVYT 57
Query: 86 WGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE--NDGTISTSR 143
G N GQLG EG K PE++ L E + ++CG + A+++ + + G S +
Sbjct: 58 CGLNTKGQLGH-EREGNK-PEQIGALADEHIVHVACGESHSLALSDRGQLFSWGAGSDGQ 115
Query: 144 LWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGI 203
L + + PRL TI+ QVSCG+ H +AL+ G WG N +GQLG G
Sbjct: 116 LGLMTTEESVAVPRLI-QKLNQQTIL-QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173
Query: 204 TCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHC 263
P+ ++ L+ P + QV+ G HS A+S +G V+ WG+ + GQLG
Sbjct: 174 EFPSQASPQRVRS----LEGIP----LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG-- 223
Query: 264 SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG------- 316
L + P V L + ++CG H+ LT G ++ +G GQLG
Sbjct: 224 -LSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282
Query: 317 LGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYG 375
+ P+ R L+ +E V +ACG HTL ++ G I+ +G + G
Sbjct: 283 VNPR-RVLELMGSE----------------VTQIACGRQHTLAFVPSSGLIYAFGCGARG 325
Query: 376 QAANEKSTYAWYPSPV 391
Q + PSPV
Sbjct: 326 QLGTGHTCNVKCPSPV 341
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 109/257 (42%), Gaps = 45/257 (17%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+ ++ WG GQ G E + +P+ + L ++CG+ H A+A+
Sbjct: 102 RGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKL-------NQQTILQVSCGNWHCLALAA 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG FTWG N GQLG G E + P++V+ L+ + ++ G + A++
Sbjct: 155 DGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-------- 206
Query: 139 ISTSRLWVWGQNQGSNF-------------PRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
+ ++ WG N +L + +SCG H L++
Sbjct: 207 -LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRA-----QKVVYISCGEEHTAVLTKS 260
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VS 244
G + +G GQLG + + RV++ ++TQ++CG H+ A V
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGS---------EVTQIACGRQHTLAFVP 311
Query: 245 ENGEVYTWGLGSVGQLG 261
+G +Y +G G+ GQLG
Sbjct: 312 SSGLIYAFGCGARGQLG 328
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPE----LFGCPAGANSRWLDIACGHE 72
+ A + WG N GQ G G+E P Q P+ L G P +A G
Sbjct: 152 LAADGQFFTWGKNSHGQLGL-GKE----FPSQASPQRVRSLEGIPLA------QVAAGGA 200
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
H+ A++ G +F WG N GQLG EE R+ P VK L+++ V ISCG TA + +
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLTKS 260
Query: 133 --RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQ 189
G S +L N N PR + + Q++CG H +A + GL+
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGY 217
A+G GQLG G TC ++ P +KGY
Sbjct: 318 AFGCGARGQLGTGHTC-NVKCPSPVKGY 344
>gi|156740286|ref|YP_001430415.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
DSM 13941]
gi|156231614|gb|ABU56397.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
DSM 13941]
Length = 792
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 125/406 (30%), Positives = 175/406 (43%), Gaps = 71/406 (17%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+ WG N SGQ G + P + G +G + IA G HT A+ S G
Sbjct: 292 VMCWGANWSGQLGDG-----TTTARSTPVAVSGLASGVTA----IAAGDSHTCALTSSGG 342
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG N FGQLGDGT R P V L S V +I+ G T A+ +S+
Sbjct: 343 VWCWGYNFFGQLGDGTTTDRSTPVAVSGLGSG-VTAIAAGDFHTCAL---------MSSG 392
Query: 143 RLWVWGQNQ------GSNFPRLFWGAFTPNTI------ICQVSCGSVHVVALSECGLLQA 190
+ WG+N+ G+ R TP + + ++ G H A + G +
Sbjct: 393 GVRCWGRNKDGQLGDGTTTTR-----STPVAVSGLVSGVTAIAAGDDHTCARTSSGGVMC 447
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG N GQLG G T + P + G +T ++ G H+ A+ +G V+
Sbjct: 448 WGDNWSGQLGDGTTTD-RSTPVAVSGLG---------SGVTAIAAGGSHTCALMSSGGVW 497
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGI--FIKDVACGGVHSCALTSKGALYAW 307
WG S GQLG D R VA+ G+ + +A GGVH+CALTS G + W
Sbjct: 498 CWGRNSSGQLG-------DGTTTDRGTPVAVSGLPSEVTAIASGGVHTCALTSSGGVMCW 550
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGR 365
G + +GQLG G T R+ P+ V +P+GV +A G HT G
Sbjct: 551 GANWSGQLGDGTTTA-------------RSTPVAVSGLPSGVMAIAAGDLHTCALTSSGG 597
Query: 366 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
+ WG NS GQ + +T P V V +AAG H+ L
Sbjct: 598 VWCWGANSSGQLGDGTTTARSTPVAVSGLPSGVTAIAAGSFHTCAL 643
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 122/405 (30%), Positives = 171/405 (42%), Gaps = 71/405 (17%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + + WG N GQ G G P + + G A IA G +HT A
Sbjct: 388 LMSSGGVRCWGRNKDGQLG-DGTTTTRSTPVAVSGLVSGVTA--------IAAGDDHTCA 438
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
S G + WG N GQLGDGT R P V L S V +I+ G T A+
Sbjct: 439 RTSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLGSG-VTAIAAGGSHTCAL------- 490
Query: 137 GTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTI------ICQVSCGSVHVVALSE 184
+S+ +W WG+N G+ R TP + + ++ G VH AL+
Sbjct: 491 --MSSGGVWCWGRNSSGQLGDGTTTDR-----GTPVAVSGLPSEVTAIASGGVHTCALTS 543
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G + WG N GQLG G T P + G + ++ G+ H+ A++
Sbjct: 544 SGGVMCWGANWSGQLGDGTTTA-RSTPVAVSGLP---------SGVMAIAAGDLHTCALT 593
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGI--FIKDVACGGVHSCALTSK 301
+G V+ WG S GQLG D R VA+ G+ + +A G H+CALTS
Sbjct: 594 SSGGVWCWGANSSGQLG-------DGTTTARSTPVAVSGLPSGVTAIAAGSFHTCALTSS 646
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLV 359
G ++ WG + +GQLG G T S + P+ V +P+GV +A G HT
Sbjct: 647 GGVWCWGANWSGQLGDGSYTDS-------------STPVAVSGLPSGVTAIAAGRFHTCA 693
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAG 404
G + W N YGQ + T + P V V V +AAG
Sbjct: 694 RTGSGGVWCWASNRYGQLGDGSYTDSSTPVAVSGLVSGVTAIAAG 738
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 125/406 (30%), Positives = 174/406 (42%), Gaps = 71/406 (17%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+ WG N SGQ G + P + G +G + IA G HT A+ S G
Sbjct: 190 VMCWGDNWSGQLGDG-----TTTDRSTPVAVSGLGSGVTA----IAAGGSHTCALMSSGG 240
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG N GQLGDGT R P V L S V +I+ G T A R + G +
Sbjct: 241 VWCWGDNWSGQLGDGTTTDRSTPVAVSGLASG-VTAIAAGGFHTCA----RTSSGGVM-- 293
Query: 143 RLWVWGQN------QGSNFPRLFWGAFTPNTI------ICQVSCGSVHVVALSECGLLQA 190
WG N G+ R TP + + ++ G H AL+ G +
Sbjct: 294 ---CWGANWSGQLGDGTTTAR-----STPVAVSGLASGVTAIAAGDSHTCALTSSGGVWC 345
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WGYN +GQLG G T + P + G +T ++ G++H+ A+ +G V
Sbjct: 346 WGYNFFGQLGDGTTTD-RSTPVAVSGLG---------SGVTAIAAGDFHTCALMSSGGVR 395
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGIF--IKDVACGGVHSCALTSKGALYAW 307
WG GQL GD R VA+ G+ + +A G H+CA TS G + W
Sbjct: 396 CWGRNKDGQL-------GDGTTTTRSTPVAVSGLVSGVTAIAAGDDHTCARTSSGGVMCW 448
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGR 365
G + +GQLG G T R+ P+ V + +GV +A G SHT M G
Sbjct: 449 GDNWSGQLGDGTTTD-------------RSTPVAVSGLGSGVTAIAAGGSHTCALMSSGG 495
Query: 366 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
+ WG NS GQ + +T P V EV +A+GG H+ L
Sbjct: 496 VWCWGRNSSGQLGDGTTTDRGTPVAVSGLPSEVTAIASGGVHTCAL 541
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 122/409 (29%), Positives = 169/409 (41%), Gaps = 71/409 (17%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + + WG N GQ G + P + G +G + IA G+ HT A
Sbjct: 82 LTSSGGVMCWGRNGFGQLGDG-----TTTDRSTPVAVSGLTSGVTA----IAAGYAHTCA 132
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ S G + WG N GQLGDGT R P V L S V +I+ G T A R +
Sbjct: 133 LMSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLASG-VTAIAAGDDHTCA----RTSS 187
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTI------ICQVSCGSVHVVALSE 184
G + WG N G+ R TP + + ++ G H AL
Sbjct: 188 GGVM-----CWGDNWSGQLGDGTTTDR-----STPVAVSGLGSGVTAIAAGGSHTCALMS 237
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G + WG N GQLG G T + P + G A +T ++ G +H+ A +
Sbjct: 238 SGGVWCWGDNWSGQLGDGTTTD-RSTPVAVSGLA---------SGVTAIAAGGFHTCART 287
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGIF--IKDVACGGVHSCALTSK 301
+G V WG GQL GD R VA+ G+ + +A G H+CALTS
Sbjct: 288 SSGGVMCWGANWSGQL-------GDGTTTARSTPVAVSGLASGVTAIAAGDSHTCALTSS 340
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLV 359
G ++ WG + GQLG G T R+ P+ V + +GV +A G HT
Sbjct: 341 GGVWCWGYNFFGQLGDGTTTD-------------RSTPVAVSGLGSGVTAIAAGDFHTCA 387
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
M G + WG N GQ + +T P V V V +AAG H+
Sbjct: 388 LMSSGGVRCWGRNKDGQLGDGTTTTRSTPVAVSGLVSGVTAIAAGDDHT 436
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/362 (30%), Positives = 155/362 (42%), Gaps = 62/362 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
IA G HT A+ S G + WG N FGQLGDGT R P V L S V +I+ G T
Sbjct: 72 IAAGGAHTCALTSSGGVMCWGRNGFGQLGDGTTTDRSTPVAVSGLTSG-VTAIAAGYAHT 130
Query: 127 AAIAEPRENDGTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTI------ICQVSC 174
A+ +S+ + WG N G+ R TP + + ++
Sbjct: 131 CAL---------MSSGGVMCWGDNWSGQLGDGTTTDR-----STPVAVSGLASGVTAIAA 176
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G H A + G + WG N GQLG G T + P + G +T ++
Sbjct: 177 GDDHTCARTSSGGVMCWGDNWSGQLGDGTTTD-RSTPVAVSGLG---------SGVTAIA 226
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGIF--IKDVACG 291
G H+ A+ +G V+ WG GQL GD R VA+ G+ + +A G
Sbjct: 227 AGGSHTCALMSSGGVWCWGDNWSGQL-------GDGTTTDRSTPVAVSGLASGVTAIAAG 279
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQL 349
G H+CA TS G + WG + +GQLG G T R+ P+ V + +GV
Sbjct: 280 GFHTCARTSSGGVMCWGANWSGQLGDGTTTA-------------RSTPVAVSGLASGVTA 326
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
+A G SHT G + WGYN +GQ + +T P V V +AAG H+
Sbjct: 327 IAAGDSHTCALTSSGGVWCWGYNFFGQLGDGTTTDRSTPVAVSGLGSGVTAIAAGDFHTC 386
Query: 410 VL 411
L
Sbjct: 387 AL 388
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 153/380 (40%), Gaps = 73/380 (19%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+ WG N SGQ G + P + G +G + IA G HT A+ S G
Sbjct: 445 VMCWGDNWSGQLGDG-----TTTDRSTPVAVSGLGSGVTA----IAAGGSHTCALMSSGG 495
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG N GQLGDGT R P V L SE S G H A S+
Sbjct: 496 VWCWGRNSSGQLGDGTTTDRGTPVAVSGLPSEVTAIASGGVHTCA----------LTSSG 545
Query: 143 RLWVWGQN------QGSNFPRLFWGAFTPNTI------ICQVSCGSVHVVALSECGLLQA 190
+ WG N G+ R TP + + ++ G +H AL+ G +
Sbjct: 546 GVMCWGANWSGQLGDGTTTAR-----STPVAVSGLPSGVMAIAAGDLHTCALTSSGGVWC 600
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG N GQLG G T P + G +T ++ G +H+ A++ +G V+
Sbjct: 601 WGANSSGQLGDGTT-TARSTPVAVSGLP---------SGVTAIAAGSFHTCALTSSGGVW 650
Query: 251 TWGLGSVGQLGHCSLQSGDKEL----LPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
WG GQLG S + LP V A +A G H+CA T G ++
Sbjct: 651 CWGANWSGQLGDGSYTDSSTPVAVSGLPSGVTA--------IAAGRFHTCARTGSGGVWC 702
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDG 364
W ++ GQLG G T S + P+ V + +GV +A G HT G
Sbjct: 703 WASNRYGQLGDGSYTDS-------------STPVAVSGLVSGVTAIAAGVVHTCARTSSG 749
Query: 365 RIHGWGYNSYGQAANEKSTY 384
+ WG NS GQ + + Y
Sbjct: 750 GVMCWGANSSGQLGDGRLLY 769
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 113/257 (43%), Gaps = 35/257 (13%)
Query: 157 RLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKG 216
RL +F+P + ++ G H AL+ G + WG N +GQLG G T + P + G
Sbjct: 57 RLHTSSFSPLQGVTAIAAGGAHTCALTSSGGVMCWGRNGFGQLGDGTTTD-RSTPVAVSG 115
Query: 217 YAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRR 276
+T ++ G H+ A+ +G V WG GQL GD R
Sbjct: 116 L---------TSGVTAIAAGYAHTCALMSSGGVMCWGDNWSGQL-------GDGTTTDRS 159
Query: 277 V-VALDGIF--IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDT 333
VA+ G+ + +A G H+CA TS G + WG + +GQLG G T
Sbjct: 160 TPVAVSGLASGVTAIAAGDDHTCARTSSGGVMCWGDNWSGQLGDGTTTD----------- 208
Query: 334 YFRNIPILV--VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
R+ P+ V + +GV +A G SHT M G + WG N GQ + +T P V
Sbjct: 209 --RSTPVAVSGLGSGVTAIAAGGSHTCALMSSGGVWCWGDNWSGQLGDGTTTDRSTPVAV 266
Query: 392 DWCVGEVRKLAAGGGHS 408
V +AAGG H+
Sbjct: 267 SGLASGVTAIAAGGFHT 283
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 112/269 (41%), Gaps = 49/269 (18%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + + WG N SGQ G + P + G P+G + IA G HT A
Sbjct: 541 LTSSGGVMCWGANWSGQLGDG-----TTTARSTPVAVSGLPSGV----MAIAAGDLHTCA 591
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ S G ++ WGAN GQLGDGT R P V L S V +I+ G+ T A+
Sbjct: 592 LTSSGGVWCWGANSSGQLGDGTTTARSTPVAVSGLPSG-VTAIAAGSFHTCAL------- 643
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI----------ICQVSCGSVHVVALSECG 186
S+ +W WG N G++T ++ + ++ G H A + G
Sbjct: 644 --TSSGGVWCWGANWSGQLGD---GSYTDSSTPVAVSGLPSGVTAIAAGRFHTCARTGSG 698
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ W N YGQLG G + P + G + +T ++ G H+ A + +
Sbjct: 699 GVWCWASNRYGQLGDGSYTDSST-PVAVSGL---------VSGVTAIAAGVVHTCARTSS 748
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPR 275
G V WG S GQL GD LL R
Sbjct: 749 GGVMCWGANSSGQL-------GDGRLLYR 770
>gi|449504701|ref|XP_002190698.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Taeniopygia
guttata]
Length = 991
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 156/336 (46%), Gaps = 32/336 (9%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P GA I+ VSCG H +AL++ G + AWG G
Sbjct: 57 TCGCNDLGQLGHEKARKRPE-HVGALDAQNIVA-VSCGEAHTLALNDKGQVYAWGLATDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG T E ++ PR I+ ++ +I QV+CG YHS A+S+ EV++WG
Sbjct: 115 QLGLPGTEECVRVPRNIRSLSEI--------QIVQVACGYYHSLALSKGSEVFSWGQNKY 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG K+ P+ + +L GI +A GG HS LT GA++ WG ++ GQLGL
Sbjct: 167 GQLGLG--YEYKKQTSPQMIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+++D Y + + V + CG HT ++G + +G YGQ
Sbjct: 225 N----------DDNDRYVPTLLKSLRSQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Query: 378 ANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
+ +++ P V +G V ++ G H+
Sbjct: 275 GHNSTSHEINPRKVFELMGSVVTQITCGRQHTTAFV 310
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 172/376 (45%), Gaps = 45/376 (11%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N R D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----LNKRVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE V L ++ + ++SCG T A+ + + G +
Sbjct: 57 TCGCNDLGQLGH--EKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR I QV+CG H +ALS+ + +WG N+YGQLG G
Sbjct: 115 QLGLPGTEECVRVPRNIRS--LSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
+ P++IK Q++ G HS ++ +G ++ WG GQLG
Sbjct: 173 YEYKKQTSPQMIKSLLGI--------PFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L + + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDDNDRYVPTLLKSLRSQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + ++ V + CG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSV--------VTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGT 331
Query: 377 AANEKSTY----AWYP 388
+N KS + +W P
Sbjct: 332 TSNRKSPFTVKGSWIP 347
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 120/255 (47%), Gaps = 41/255 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG GQ G G E +R+P+ + + + + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLATDGQLGLPGTEECVRVPRNI-------RSLSEIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTEEGRK-HPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F+WG N++GQLG G E ++ P+ +K L F + + GAH
Sbjct: 155 GSEVFSWGQNKYGQLGLGYEYKKQTSPQMIKSLLGIPFAQIAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQ----GSN------FPRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
T+S + ++ WG+N+ G N P L + + + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNKFGQLGLNDDNDRYVPTLLKSLRSQKVV--HICCGEDHTAALTKEGG 262
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSEN 246
+ +G YGQLG T + +V + +TQ++CG H+ A V +
Sbjct: 263 VFTFGAGGYGQLGHNSTSHEINPRKVFELMGSV---------VTQITCGRQHTTAFVPSS 313
Query: 247 GEVYTWGLGSVGQLG 261
G +Y++GLG GQLG
Sbjct: 314 GRIYSFGLGGNGQLG 328
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 94/202 (46%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G E + + Q+ L G P + IA G H+ +
Sbjct: 156 SEVFSWGQNKYGQLGL-GYEYKKQTSPQMIKSLLGIP------FAQIAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG + R P +K L+S+ V I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRSQKVVHICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGYN 194
T +GQ N S+ PR + +++ Q++CG H A G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSVVTQITCGRQHTTAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTG-TTSNRKSPFTVKG 343
>gi|444910521|ref|ZP_21230705.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444719140|gb|ELW59939.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 715
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 129/443 (29%), Positives = 186/443 (41%), Gaps = 93/443 (20%)
Query: 25 VW--GYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
VW GYN+ G+ G L P Q+ L G + +A G+ H+ A+ SDGT
Sbjct: 17 VWASGYNYHGELGNGTATDSLS-PVQVS-NLTGV--------ISVAAGYYHSLALKSDGT 66
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG N +G LGD T R P +V L V +I+ + + A+ ++DGT+
Sbjct: 67 VWAWGLNTYGNLGDNTTTTRTKPVQVLNLTG--VIAIAADYYQSFAL----KSDGTV--- 117
Query: 143 RLWVWGQNQGSNF--------------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
W WG N S + F G +P T + ++ G+ H +AL G +
Sbjct: 118 --WSWGYNGNSALGNASPATQKLPAQVQQSFGGILSPLTDVVAIAAGTHHTLALKSNGTV 175
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG N GQLG G Q V +A L +S G HS A+ NG
Sbjct: 176 WSWGLNSSGQLGNGTLAT--QSAAV---------QAVNLTDAVAISAGAAHSLALRANGA 224
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
V +WG + GQLG+ + + P V L+ IK +A GG HS AL S G + AWG
Sbjct: 225 VVSWGANTYGQLGNGTTTTSAS---PVGVSGLNN--IKSLAAGGNHSLALKSDGTVTAWG 279
Query: 309 GSQAGQLGLGPQTRSFSLIPNES-----------------------------DTY----- 334
+ GQ+G G S I + +TY
Sbjct: 280 YNAYGQVGNGATANVLSPIAVSTLSGVTAVSAGVSHSHAIGSSNGVIWGWGLNTYGGLGN 339
Query: 335 ----FRNIP-ILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPS 389
R+ P +++ +G+Q VA G HT+ DG + WG N+YGQ + P
Sbjct: 340 NTKVNRSTPGTILLTSGLQGVAGGAQHTIYVKGDGTVWAWGSNTYGQIGDGTPLRRLTPV 399
Query: 390 PVDWCVGEVRKLAAGGGHSAVLA 412
+ G + +AAG HS LA
Sbjct: 400 QLSTLTG-IIAVAAGANHSLALA 421
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 125/424 (29%), Positives = 188/424 (44%), Gaps = 59/424 (13%)
Query: 1 MDINEIIGETARPVDNIPAKS--AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPA 58
+++ +I A + KS ++ WGYN + G Q ++P Q+ + FG
Sbjct: 93 LNLTGVIAIAADYYQSFALKSDGTVWSWGYNGNSALGNASPATQ-KLPAQVQ-QSFGGIL 150
Query: 59 GANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKS 118
+ + IA G HT A+ S+GT+++WG N GQLG+GT + + L +
Sbjct: 151 SPLTDVVAIAAGTHHTLALKSNGTVWSWGLNSSGQLGNGTLATQSAAVQAVNLTDAV--A 208
Query: 119 ISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI---------I 169
IS GA + A+ R N +S WG N + +L G T + I
Sbjct: 209 ISAGAAHSLAL---RANGAVVS------WGANT---YGQLGNGTTTTSASPVGVSGLNNI 256
Query: 170 CQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK 229
++ G H +AL G + AWGYN YGQ+G G T L P + L
Sbjct: 257 KSLAAGGNHSLALKSDGTVTAWGYNAYGQVGNGATANVLS-PIAVS----------TLSG 305
Query: 230 ITQVSCGEYHSAAV-SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
+T VS G HS A+ S NG ++ WGL + G LG+ + P ++ G+ + V
Sbjct: 306 VTAVSAGVSHSHAIGSSNGVIWGWGLNTYGGLGN---NTKVNRSTPGTILLTSGL--QGV 360
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI-LVVPNGV 347
A G H+ + G ++AWG + GQ+G G R R P+ L G+
Sbjct: 361 AGGAQHTIYVKGDGTVWAWGSNTYGQIGDGTPLR-------------RLTPVQLSTLTGI 407
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH 407
VA G +H+L +G + WG N++GQ + +T P+ V G V LAAG H
Sbjct: 408 IAVAAGANHSLALAANGTVFAWGRNNHGQLGDGSTTNRSLPTQVPNLTGIV-ALAAGATH 466
Query: 408 SAVL 411
S L
Sbjct: 467 SLAL 470
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 119/403 (29%), Positives = 179/403 (44%), Gaps = 56/403 (13%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + + WGYN GQ G G + P + L G A ++ G H+ A
Sbjct: 269 LKSDGTVTAWGYNAYGQVG-NGATANVLSPIAVS-TLSGVTA--------VSAGVSHSHA 318
Query: 77 V-ASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
+ +S+G ++ WG N +G LG+ T+ R P + L + ++ ++ GA T + +
Sbjct: 319 IGSSNGVIWGWGLNTYGGLGNNTKVNRSTPGTI--LLTSGLQGVAGGAQHTIYV----KG 372
Query: 136 DGTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQ 189
DGT+ W WG N G+ RL + T I V+ G+ H +AL+ G +
Sbjct: 373 DGTV-----WAWGSNTYGQIGDGTPLRRLTPVQLSTLTGIIAVAAGANHSLALAANGTVF 427
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
AWG N +GQLG G T + P L I ++ G HS A+ +G V
Sbjct: 428 AWGRNNHGQLGDGSTTN-----------RSLPTQVPNLTGIVALAAGATHSLALRFDGTV 476
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
Y WG +GQLG ++ L P V L+ + ++ G HS A+ G +AWG
Sbjct: 477 YAWGRNHLGQLGD---ETCTDRLSPVAVHYLEKVVA--ISAGDNHSLAIHQNGTAFAWGS 531
Query: 310 SQAGQL-GLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHG 368
+ GQL G + FS + ++ IP +V G+ A G +HTL+ +G
Sbjct: 532 DEHGQLCDSGSGSGRFSPLISQ-------IPGIVKGIGI---AAGANHTLLLEANGTAWA 581
Query: 369 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
G N YGQ + +T P P+ R LAAGG SA L
Sbjct: 582 CGDNLYGQLGDGTTTDKSAPVPITTLTNAAR-LAAGGNTSAAL 623
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 156/349 (44%), Gaps = 46/349 (13%)
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAI 129
G HT AV DGT++ G N G+LG+GT P +V L V S++ G + + A+
Sbjct: 4 GAHHTLAVRQDGTVWASGYNYHGELGNGTATDSLSPVQVSNLTG--VISVAAGYYHSLAL 61
Query: 130 AEPRENDGTISTSRLWVWGQNQGSNF------PRLFWGAFTPNTIICQVSCGSVHVVALS 183
++DGT+ W WG N N R T + ++ AL
Sbjct: 62 ----KSDGTV-----WAWGLNTYGNLGDNTTTTRTKPVQVLNLTGVIAIAADYYQSFALK 112
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
G + +WGYN LG +V + + L L + ++ G +H+ A+
Sbjct: 113 SDGTVWSWGYNGNSALGNASPATQKLPAQVQQSFGGILS---PLTDVVAIAAGTHHTLAL 169
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD---VACGGVHSCALTS 300
NG V++WGL S GQLG+ +L + + A+ + + D ++ G HS AL +
Sbjct: 170 KSNGTVWSWGLNSSGQLGNGTLAT--------QSAAVQAVNLTDAVAISAGAAHSLALRA 221
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLV 359
GA+ +WG + GQLG G T S S P+ V N ++ +A G +H+L
Sbjct: 222 NGAVVSWGANTYGQLGNGTTTTSAS-------------PVGVSGLNNIKSLAAGGNHSLA 268
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
DG + WGYN+YGQ N + P V G V ++AG HS
Sbjct: 269 LKSDGTVTAWGYNAYGQVGNGATANVLSPIAVSTLSG-VTAVSAGVSHS 316
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 159/366 (43%), Gaps = 44/366 (12%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ ++ WG N GQ G R+L P QL L G A +A G H+ A
Sbjct: 370 VKGDGTVWAWGSNTYGQIGDGTPLRRLT-PVQLS-TLTGIIA--------VAAGANHSLA 419
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+A++GT+F WG N GQLGDG+ R P +V L + +++ GA + A+ D
Sbjct: 420 LAANGTVFAWGRNNHGQLGDGSTTNRSLPTQVPNLTG--IVALAAGATHSLAL----RFD 473
Query: 137 GTISTSRLWVWGQNQGSNF------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
GT+ + WG+N RL A + +S G H +A+ + G A
Sbjct: 474 GTV-----YAWGRNHLGQLGDETCTDRLSPVAVHYLEKVVAISAGDNHSLAIHQNGTAFA 528
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +E+GQL C+ G ++ + + P + K ++ G H+ + NG +
Sbjct: 529 WGSDEHGQL-----CDSGSGSGR---FSPLISQIPGIVKGIGIAAGANHTLLLEANGTAW 580
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
G GQLG + DK P + L +A GG S ALT+ G + WG +
Sbjct: 581 ACGDNLYGQLGDGTTT--DKS-APVPITTLTN--AARLAAGGNTSAALTTNGTVSTWGLN 635
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWG 370
+GQLG ++ P Y P + V +GV + G +H DG +H WG
Sbjct: 636 SSGQLGDNTTASRTTIAPVLRTVY----PTVEVFSGVASLGAGTAHLTAVKTDGYVHSWG 691
Query: 371 YNSYGQ 376
N GQ
Sbjct: 692 LNDSGQ 697
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 110/379 (29%), Positives = 168/379 (44%), Gaps = 60/379 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
I+ WG N G G ++ + P + S +A G +HT V DGT
Sbjct: 326 IWGWGLNTYG-----GLGNNTKVNRSTPGTIL-----LTSGLQGVAGGAQHTIYVKGDGT 375
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG+N +GQ+GDGT R P ++ L + +++ GA+ + A+A +GT+
Sbjct: 376 VWAWGSNTYGQIGDGTPLRRLTPVQLSTLTG--IIAVAAGANHSLALAA----NGTV--- 426
Query: 143 RLWVWGQNQGSNFPRLFWGAFT--------PN-TIICQVSCGSVHVVALSECGLLQAWGY 193
+ WG+N N +L G+ T PN T I ++ G+ H +AL G + AWG
Sbjct: 427 --FAWGRN---NHGQLGDGSTTNRSLPTQVPNLTGIVALAAGATHSLALRFDGTVYAWGR 481
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
N GQLG TC P + LEK+ +S G+ HS A+ +NG + WG
Sbjct: 482 NHLGQLGD-ETCTDRLSPVAVH----------YLEKVVAISAGDNHSLAIHQNGTAFAWG 530
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK-DVACGGVHSCALTSKGALYAWGGSQA 312
GQL C SG P + + GI +A G H+ L + G +A G +
Sbjct: 531 SDEHGQL--CDSGSGSGRFSP-LISQIPGIVKGIGIAAGANHTLLLEANGTAWACGDNLY 587
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYN 372
GQLG G T + +PI + N +L A G++ + +G + WG N
Sbjct: 588 GQLGDGTTTDKSA-----------PVPITTLTNAARLAAGGNT-SAALTTNGTVSTWGLN 635
Query: 373 SYGQAANEKSTYAWYPSPV 391
S GQ + + +PV
Sbjct: 636 SSGQLGDNTTASRTTIAPV 654
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 100/322 (31%), Positives = 144/322 (44%), Gaps = 60/322 (18%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++ WG N+ GQ G G +P Q+P L G A +A G H+ A
Sbjct: 420 LAANGTVFAWGRNNHGQLG-DGSTTNRSLPTQVP-NLTGIVA--------LAAGATHSLA 469
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DGT++ WG N GQLGD T R P V L E V +IS G + + AI + +
Sbjct: 470 LRFDGTVYAWGRNHLGQLGDETCTDRLSPVAVHYL--EKVVAISAGDNHSLAIHQ----N 523
Query: 137 GTISTSRLWVWGQNQ-------GSNFPRLFWGAFTPNTIICQV---------SCGSVHVV 180
GT + WG ++ GS R F+P +I Q+ + G+ H +
Sbjct: 524 GTA-----FAWGSDEHGQLCDSGSGSGR-----FSP--LISQIPGIVKGIGIAAGANHTL 571
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
L G A G N YGQLG G T + P I L +++ G S
Sbjct: 572 LLEANGTAWACGDNLYGQLGDGTTTD-KSAPVPIT----------TLTNAARLAAGGNTS 620
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLP--RRVVALDGIF--IKDVACGGVHSC 296
AA++ NG V TWGL S GQLG + S + P R V +F + + G H
Sbjct: 621 AALTTNGTVSTWGLNSSGQLGDNTTAS-RTTIAPVLRTVYPTVEVFSGVASLGAGTAHLT 679
Query: 297 ALTSKGALYAWGGSQAGQLGLG 318
A+ + G +++WG + +GQ+G G
Sbjct: 680 AVKTDGYVHSWGLNDSGQIGDG 701
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 105/252 (41%), Gaps = 33/252 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG NH GQ G + +L P + + + I+ G H+ A+ +GT
Sbjct: 476 VYAWGRNHLGQLGDETCTDRLS-----PVAVHYL-----EKVVAISAGDNHSLAIHQNGT 525
Query: 83 LFTWGANEFGQLGD-GTEEGRKHPEKVKQLQSEFVKSI--SCGAHCTAAIAEPRENDGTI 139
F WG++E GQL D G+ GR P + Q+ VK I + GA+ T + E +GT
Sbjct: 526 AFAWGSDEHGQLCDSGSGSGRFSP-LISQIPG-IVKGIGIAAGANHTLLL----EANGTA 579
Query: 140 STSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
W G N G+ + T T +++ G AL+ G + WG
Sbjct: 580 -----WACGDNLYGQLGDGTTTDKSAPVPITTLTNAARLAAGGNTSAALTTNGTVSTWGL 634
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
N GQLG T V++ + + G H AV +G V++WG
Sbjct: 635 NSSGQLGDNTTASRTTIAPVLR---TVYPTVEVFSGVASLGAGTAHLTAVKTDGYVHSWG 691
Query: 254 LGSVGQLGHCSL 265
L GQ+G +L
Sbjct: 692 LNDSGQIGDGTL 703
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 12/95 (12%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQL-----PPELFGCPAGANSRWLDIACGH 71
+ + WG N SGQ G + I L E+F A + G
Sbjct: 623 LTTNGTVSTWGLNSSGQLGDNTTASRTTIAPVLRTVYPTVEVFSGVA-------SLGAGT 675
Query: 72 EHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPE 106
H AV +DG + +WG N+ GQ+GDGT R P
Sbjct: 676 AHLTAVKTDGYVHSWGLNDSGQIGDGTLVNRPLPT 710
>gi|291401438|ref|XP_002717008.1| PREDICTED: hect domain and RLD 3 [Oryctolagus cuniculus]
Length = 1504
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 153/312 (49%), Gaps = 52/312 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G ER+ P+Q+ A A+ + +ACG H+ A++ G
Sbjct: 509 VYTCGLNTKGQLGH---EREGNKPEQIG-------ALADQHIVHVACGESHSLALSDRGQ 558
Query: 83 LFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
LF+WGA GQLG TE+ P +++L + + +SCG HC A A DG
Sbjct: 559 LFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA-----DG--- 610
Query: 141 TSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
+ + WG+N G FP +P + + QV+ G H ALS G
Sbjct: 611 --QFFTWGKNSHGQLGLGKEFP----SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 664
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ WG N GQLG + R + K L +K+ +SCGE H+A ++++G
Sbjct: 665 VFGWGMNNAGQLGLSD-----EKDRESPCHVKLL----RTQKVVYISCGEEHTAVLTKSG 715
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYA 306
V+T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG H+ A S G +YA
Sbjct: 716 GVFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 772
Query: 307 WGGSQAGQLGLG 318
+G GQLG G
Sbjct: 773 FGCGARGQLGTG 784
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/342 (30%), Positives = 160/342 (46%), Gaps = 32/342 (9%)
Query: 82 TLFTWGANEFGQLG--DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
T+ WG GQ G + P+ + VK ++CG + + + E DG +
Sbjct: 454 TMLCWGYWSLGQPGISSNLQGIVAEPQVCGFIADRSVKEVACGGNHSVFLLE----DGEV 509
Query: 140 STSRLWVWGQ---NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
T L GQ + N P GA I+ V+CG H +ALS+ G L +WG
Sbjct: 510 YTCGLNTKGQLGHEREGNKPEQI-GALADQHIV-HVACGESHSLALSDRGQLFSWGAGSD 567
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG T + + PR+I+ + + I QVSCG +H A++ +G+ +TWG S
Sbjct: 568 GQLGLMTTEDSVAVPRLIQKLNQ--------QTILQVSCGNWHCLALAADGQFFTWGKNS 619
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
GQLG + + P+RV +L+GI + VA GG HS AL+ GA++ WG + AGQLG
Sbjct: 620 HGQLGLG--KEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 677
Query: 317 LGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
L + ES + + L+ V ++CG HT V + G + +G S GQ
Sbjct: 678 LSDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 727
Query: 377 AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
++ P V +G EV ++A G H+ + L
Sbjct: 728 LGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 769
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 177/402 (44%), Gaps = 58/402 (14%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFT 85
WGY GQ G + + Q+ C A+ ++ACG H+ + DG ++T
Sbjct: 458 WGYWSLGQPGISSNLQGIVAEPQV------CGFIADRSVKEVACGGNHSVFLLEDGEVYT 511
Query: 86 WGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE--NDGTISTSR 143
G N GQLG EG K PE++ L + + ++CG + A+++ + + G S +
Sbjct: 512 CGLNTKGQLGH-EREGNK-PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQ 569
Query: 144 LWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGI 203
L + PRL TI+ QVSCG+ H +AL+ G WG N +GQLG G
Sbjct: 570 LGLMTTEDSVAVPRLI-QKLNQQTIL-QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 627
Query: 204 TCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHC 263
P+ ++ L+ P + QV+ G HS A+S +G V+ WG+ + GQLG
Sbjct: 628 EFPSQTSPQRVRS----LEGIP----LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 679
Query: 264 SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG------- 316
D+E P V L + ++CG H+ LT G ++ +G GQLG
Sbjct: 680 D--EKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 736
Query: 317 LGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYG 375
+ P+ R L+ +E V +ACG HTL ++ G I+ +G + G
Sbjct: 737 VNPR-RVLELMGSE----------------VTQIACGRQHTLAFVPSSGLIYAFGCGARG 779
Query: 376 QAANEKSTYAWYPSPVD--WCVGEVRKLAAGGGHSAVLADAC 415
Q + PSPV W AA G + AD C
Sbjct: 780 QLGTGHTCNVKCPSPVKGYW--------AAHSGQLSARADRC 813
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 35/252 (13%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+ ++ WG GQ G E + +P+ + L ++CG+ H A+A+
Sbjct: 556 RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ-------KLNQQTILQVSCGNWHCLALAA 608
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG FTWG N GQLG G E + P++V+ L+ + ++ G + A++
Sbjct: 609 DGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS-------- 660
Query: 139 ISTSRLWVWGQNQGSNF--------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
+ ++ WG N + +SCG H L++ G +
Sbjct: 661 -LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFT 719
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEV 249
+G GQLG + + RV++ ++TQ++CG H+ A V +G +
Sbjct: 720 FGAGSCGQLGHDSMNDEVNPRRVLELMG---------SEVTQIACGRQHTLAFVPSSGLI 770
Query: 250 YTWGLGSVGQLG 261
Y +G G+ GQLG
Sbjct: 771 YAFGCGARGQLG 782
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPE----LFGCPAGANSRWLDIACGHE 72
+ A + WG N GQ G G+E P Q P+ L G P +A G
Sbjct: 606 LAADGQFFTWGKNSHGQLGL-GKE----FPSQTSPQRVRSLEGIPLA------QVAAGGA 654
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
H+ A++ G +F WG N GQLG E+ R+ P VK L+++ V ISCG TA + +
Sbjct: 655 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 714
Query: 133 --RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQ 189
G S +L N N PR + + Q++CG H +A + GL+
Sbjct: 715 GGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 771
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGY 217
A+G GQLG G TC ++ P +KGY
Sbjct: 772 AFGCGARGQLGTGHTC-NVKCPSPVKGY 798
>gi|406991558|gb|EKE11048.1| hypothetical protein ACD_15C00149G0001, partial [uncultured
bacterium]
Length = 1643
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 134/483 (27%), Positives = 212/483 (43%), Gaps = 61/483 (12%)
Query: 2 DINEIIGETARPVDNIPAKS--AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCP-A 58
+++ II +A ++ KS ++ WG N GQ G I K+ P ++
Sbjct: 413 NLSSIISVSADGTHSLSLKSDGTVWSWGKNDKGQLGINSF-----IDKKTPVQVLDSTGT 467
Query: 59 GANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKS 118
G + + IA G++ + AV +DG ++WG + GQLGD R P ++ L + +
Sbjct: 468 GFLTDIVSIATGNKFSLAVKNDGKAWSWGYDSTGQLGDNALTERSLPFQI--LDTGATGN 525
Query: 119 ISCGAHCTA----AIAEPRENDGTISTSRLWVWGQNQ----GSNF------PRLFWGAFT 164
+S + A+A ++DG++ W WG+N G+N P WG
Sbjct: 526 LSQVSFIDGGDGYAVAFKTDSDGSV-----WSWGKNDKGQLGNNTVDPVRTPISTWGPAN 580
Query: 165 PNTIICQ-VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDE 223
N Q VS G H +AL G + WG N GQLG L P ++G F
Sbjct: 581 GNIPDVQSVSSGRYHTIALKTDGTVWDWGGNGNGQLGTTAGQNRLT-PIQVRGPGGF--- 636
Query: 224 APELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
LE I +V+ G+YHS A +G V+ WG GS+G+LG + S + + A G
Sbjct: 637 -GNLENIVEVAAGDYHSLARRSDGTVWAWGRGSLGELGDGTWISTRYNPVQVKDAAGTGF 695
Query: 284 FIKDVA--CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL 341
VA G +S AL S G ++AWG + GQLG ++ T ++N+P+
Sbjct: 696 LTNVVAISAGEDYSVALRSDGTVWAWGKNDRGQLG-------------DNSTNYKNLPVQ 742
Query: 342 VVP-------NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWC 394
V+ N V ++ G + LV DG + WG+N+ GQ + + P V
Sbjct: 743 VLGVGGAGFLNNVSSISAGSNFVLVAKNDGTVFSWGHNANGQLGDNTVSGKLTPIQV-LN 801
Query: 395 VGEVRKLAAGGGHSAVLADACSLKEL---CEFRLAESVTLSNASEIEDVASRTGSEALAR 451
+ V ++AG HS L S+ +L E + N+ V + TG+ L+
Sbjct: 802 INNVSSISAGYAHSLALKTDGSVWSWGWNGNGQLGEGTNIDNSLLPLQVKNSTGTGFLSD 861
Query: 452 LCE 454
+ +
Sbjct: 862 ISK 864
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 119/434 (27%), Positives = 184/434 (42%), Gaps = 79/434 (18%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++ WG N +GQ G + +L + P FG +++A G H+ A SDG
Sbjct: 604 TVWDWGGNGNGQLGTTAGQNRLTPIQVRGPGGFGNLENI----VEVAAGDYHSLARRSDG 659
Query: 82 TLFTWGANEFGQLGDGT-EEGRKHPEKVKQLQSE----FVKSISCGAHCTAAIAEPREND 136
T++ WG G+LGDGT R +P +VK V +IS G + A+ +D
Sbjct: 660 TVWAWGRGSLGELGDGTWISTRYNPVQVKDAAGTGFLTNVVAISAGEDYSVAL----RSD 715
Query: 137 GTISTSRLWVWGQNQG----------SNFPRLFWGA----FTPNTIICQVSCGSVHVVAL 182
GT+ W WG+N N P G F N + +S GS V+
Sbjct: 716 GTV-----WAWGKNDRGQLGDNSTNYKNLPVQVLGVGGAGFLNN--VSSISAGSNFVLVA 768
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
G + +WG+N GQLG L +V+ + ++ +S G HS A
Sbjct: 769 KNDGTVFSWGHNANGQLGDNTVSGKLTPIQVLN-----------INNVSSISAGYAHSLA 817
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI-FIKDV---ACGGVHSCAL 298
+ +G V++WG GQLG + + D LLP +V G F+ D+ A G H +
Sbjct: 818 LKTDGSVWSWGWNGNGQLGEGT--NIDNSLLPLQVKNSTGTGFLSDISKIATGSNHCLVM 875
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN-------GVQLVA 351
S +AWG + GQLG + +N+P+ V+ + GV V
Sbjct: 876 KSDNTAFAWGLNGNGQLG-------------NNSIVNKNLPVQVLNSNGSSGFTGVSFVE 922
Query: 352 CGHSH-TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV------DWCVGEVRKLAAG 404
G ++ T++ D + WG NSYG+ N + P V + VG+ ++G
Sbjct: 923 AGFANSTIIKSSDSLVWNWGINSYGELGNNRVDGTLLPVSVWGSASGNMKVGKTFYNSSG 982
Query: 405 GGHSAVLADACSLK 418
SAV+ D S++
Sbjct: 983 NFTSAVI-DTKSIR 995
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 166/381 (43%), Gaps = 56/381 (14%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+++ WG N GQ G + P + P +G G ++ G HT A+ +DG
Sbjct: 549 SVWSWGKNDKGQLGNNTVD-----PVRTPISTWGPANGNIPDVQSVSSGRYHTIALKTDG 603
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQL----QSEFVKSISCGAHCTAAIAEPRENDG 137
T++ WG N GQLG + R P +V+ E + ++ G + + A R +DG
Sbjct: 604 TVWDWGGNGNGQLGTTAGQNRLTPIQVRGPGGFGNLENIVEVAAGDYHSLA----RRSDG 659
Query: 138 TISTSRLWVWGQNQGSNFPRLFWGAFTPN-------------TIICQVSCGSVHVVALSE 184
T+ W WG+ W + N T + +S G + VAL
Sbjct: 660 TV-----WAWGRGSLGELGDGTWISTRYNPVQVKDAAGTGFLTNVVAISAGEDYSVALRS 714
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIK-GYAKFLDEAPELEKITQVSCGEYHSAAV 243
G + AWG N+ GQLG T +V+ G A FL+ ++ +S G
Sbjct: 715 DGTVWAWGKNDRGQLGDNSTNYKNLPVQVLGVGGAGFLN------NVSSISAGSNFVLVA 768
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+G V++WG + GQLG ++ +L P +V+ ++ + ++ G HS AL + G+
Sbjct: 769 KNDGTVFSWGHNANGQLGDNTVSG---KLTPIQVLNINNV--SSISAGYAHSLALKTDGS 823
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIP----NESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
+++WG + GQLG G + SL+P N + T F + + +A G +H LV
Sbjct: 824 VWSWGWNGNGQLGEGTNIDN-SLLPLQVKNSTGTGFLS--------DISKIATGSNHCLV 874
Query: 360 YMRDGRIHGWGYNSYGQAANE 380
D WG N GQ N
Sbjct: 875 MKSDNTAFAWGLNGNGQLGNN 895
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 187/431 (43%), Gaps = 73/431 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDI---ACGHEH 73
I + ++++ WG N SGQ G K I + P ++ G AG + DI + G H
Sbjct: 206 IKSDNSVWSWGENTSGQLGDK-----TLIDRYTPVQVVG--AGGSGYLNDIEMVSAGTNH 258
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS----EFVKSISCGAHCTAAI 129
+ A+ SDGT+++WG N+ GQLG+ + P +V V S+S G + A+
Sbjct: 259 SLALKSDGTVWSWGNNDNGQLGNNLVSLKNIPVQVVGPGGIGVLSNVISVSAGEGYSLAL 318
Query: 130 AEPRENDGTISTSRLWVWGQNQ----GSN------FP--RLFWGAFTPNTIICQVSCGSV 177
++DGT+ W WG+N G N +P L G + + +S G+
Sbjct: 319 ----KSDGTV-----WSWGKNTVGQLGDNTIVEKHYPVQVLGVGGVEFLSSVASISAGAS 369
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
+ +A+ G + AWG N+ GQLG + +V+ +D L I VS
Sbjct: 370 YALAVKSDGTVVAWGKNDSGQLGNNSYADSYVPVQVLG-----VDGMGNLSSIISVSADG 424
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI-FIKD---VACGGV 293
HS ++ +G V++WG GQLG S DK+ P +V+ G F+ D +A G
Sbjct: 425 THSLSLKSDGTVWSWGKNDKGQLGINSFI--DKK-TPVQVLDSTGTGFLTDIVSIATGNK 481
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG------- 346
S A+ + G ++WG GQLG T R++P ++ G
Sbjct: 482 FSLAVKNDGKAWSWGYDSTGQLGDNALTE-------------RSLPFQILDTGATGNLSQ 528
Query: 347 VQLVACGHSHTLVYM--RDGRIHGWGYNSYGQAANEKSTYAWYP----SPVDWCVGEVRK 400
V + G + + + DG + WG N GQ N P P + + +V+
Sbjct: 529 VSFIDGGDGYAVAFKTDSDGSVWSWGKNDKGQLGNNTVDPVRTPISTWGPANGNIPDVQS 588
Query: 401 LAAGGGHSAVL 411
+++G H+ L
Sbjct: 589 VSSGRYHTIAL 599
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 165/388 (42%), Gaps = 62/388 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGAN--SRWLDIACGHEHT 74
+ + ++ WG N +GQ G L K +P ++ G P G S + ++ G ++
Sbjct: 262 LKSDGTVWSWGNNDNGQLGN-----NLVSLKNIPVQVVG-PGGIGVLSNVISVSAGEGYS 315
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EF---VKSISCGAHCTAAIA 130
A+ SDGT+++WG N GQLGD T + +P +V + EF V SIS GA A+
Sbjct: 316 LALKSDGTVWSWGKNTVGQLGDNTIVEKHYPVQVLGVGGVEFLSSVASISAGASYALAV- 374
Query: 131 EPRENDGTISTSRLWVWGQNQGSNF-PRLFWGAFTPNTI-----------ICQVSCGSVH 178
++DGT+ WG+N + ++ P + I VS H
Sbjct: 375 ---KSDGTVV-----AWGKNDSGQLGNNSYADSYVPVQVLGVDGMGNLSSIISVSADGTH 426
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
++L G + +WG N+ GQLG + +V+ L I ++ G
Sbjct: 427 SLSLKSDGTVWSWGKNDKGQLGINSFIDKKTPVQVLDSTGTGF-----LTDIVSIATGNK 481
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV------ALDGIFIKDVACGG 292
S AV +G+ ++WG S GQLG +L + LP +++ L + D G
Sbjct: 482 FSLAVKNDGKAWSWGYDSTGQLGDNALT---ERSLPFQILDTGATGNLSQVSFIDGGDGY 538
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG----VQ 348
+ S G++++WG + GQLG N D I NG VQ
Sbjct: 539 AVAFKTDSDGSVWSWGKNDKGQLG-----------NNTVDPVRTPISTWGPANGNIPDVQ 587
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
V+ G HT+ DG + WG N GQ
Sbjct: 588 SVSSGRYHTIALKTDGTVWDWGGNGNGQ 615
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 146/334 (43%), Gaps = 51/334 (15%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS----EFVKSISCG 122
I+ G+ A+ SD ++++WG N GQLGD T R P +V ++ +S G
Sbjct: 196 ISAGNSFVLAIKSDNSVWSWGENTSGQLGDKTLIDRYTPVQVVGAGGSGYLNDIEMVSAG 255
Query: 123 AHCTAAIAEPRENDGTISTSRLWVWGQNQG----------SNFPRLFWGAFTPNTI---- 168
+ + A+ ++DGT+ W WG N N P G P I
Sbjct: 256 TNHSLAL----KSDGTV-----WSWGNNDNGQLGNNLVSLKNIPVQVVG---PGGIGVLS 303
Query: 169 -ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIK-GYAKFLDEAPE 226
+ VS G + +AL G + +WG N GQLG E +V+ G +F
Sbjct: 304 NVISVSAGEGYSLALKSDGTVWSWGKNTVGQLGDNTIVEKHYPVQVLGVGGVEF------ 357
Query: 227 LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI--- 283
L + +S G ++ AV +G V WG GQLG+ S +P +V+ +DG+
Sbjct: 358 LSSVASISAGASYALAVKSDGTVVAWGKNDSGQLGNNSYA---DSYVPVQVLGVDGMGNL 414
Query: 284 -FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
I V+ G HS +L S G +++WG + GQLG+ S I ++ +
Sbjct: 415 SSIISVSADGTHSLSLKSDGTVWSWGKNDKGQLGIN------SFIDKKTPVQVLDSTGTG 468
Query: 343 VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+ +A G+ +L DG+ WGY+S GQ
Sbjct: 469 FLTDIVSIATGNKFSLAVKNDGKAWSWGYDSTGQ 502
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 117/262 (44%), Gaps = 43/262 (16%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVI-KGYAKFLDEAPEL 227
+ +S G+ V+A+ + +WG N GQLG + +V+ G + +L++
Sbjct: 193 VAAISAGNSFVLAIKSDNSVWSWGENTSGQLGDKTLIDRYTPVQVVGAGGSGYLND---- 248
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH--CSLQSGDKELLPRRVVALDGI-- 283
I VS G HS A+ +G V++WG GQLG+ SL++ +P +VV GI
Sbjct: 249 --IEMVSAGTNHSLALKSDGTVWSWGNNDNGQLGNNLVSLKN-----IPVQVVGPGGIGV 301
Query: 284 --FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL 341
+ V+ G +S AL S G +++WG + GQLG ++ ++ P+
Sbjct: 302 LSNVISVSAGEGYSLALKSDGTVWSWGKNTVGQLG-------------DNTIVEKHYPVQ 348
Query: 342 VVPNG-------VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWC 394
V+ G V ++ G S+ L DG + WG N GQ N ++ P V
Sbjct: 349 VLGVGGVEFLSSVASISAGASYALAVKSDGTVVAWGKNDSGQLGNNSYADSYVPVQVLGV 408
Query: 395 VG-----EVRKLAAGGGHSAVL 411
G + ++A G HS L
Sbjct: 409 DGMGNLSSIISVSADGTHSLSL 430
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 28/201 (13%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI-FIKD- 287
+ +S G A+ + V++WG + GQLG +L P +VV G ++ D
Sbjct: 193 VAAISAGNSFVLAIKSDNSVWSWGENTSGQLGDKTLI---DRYTPVQVVGAGGSGYLNDI 249
Query: 288 --VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV-P 344
V+ G HS AL S G +++WG + GQLG + +NIP+ VV P
Sbjct: 250 EMVSAGTNHSLALKSDGTVWSWGNNDNGQLG-------------NNLVSLKNIPVQVVGP 296
Query: 345 NGVQL------VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEV 398
G+ + V+ G ++L DG + WG N+ GQ + YP V VG V
Sbjct: 297 GGIGVLSNVISVSAGEGYSLALKSDGTVWSWGKNTVGQLGDNTIVEKHYPVQV-LGVGGV 355
Query: 399 RKLAAGGGHSAVLADACSLKE 419
L++ SA + A ++K
Sbjct: 356 EFLSSVASISAGASYALAVKS 376
>gi|326918486|ref|XP_003205519.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
[Meleagris gallopavo]
Length = 1050
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/311 (34%), Positives = 153/311 (49%), Gaps = 50/311 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G + + PEL G AG + + +ACG H+ A++ G
Sbjct: 55 VYTCGLNTKGQLGHESEGSK--------PELIGALAGQHI--VHVACGESHSVALSDQGQ 104
Query: 83 LFTWGANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
+F+WGA GQLG T E+ P +K+L + + ISCG HC A A DG
Sbjct: 105 VFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAA-----DG--- 156
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFTPNTI------------ICQVSCGSVHVVALSECGLL 188
+ + WGQN ++ +L G P+ + QV+ G H ALS G +
Sbjct: 157 --QFFTWGQN---SYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAV 211
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG N GQLG + R + K L +K+ +SCGE H+A ++++G
Sbjct: 212 FGWGKNSSGQLGLSD-----ERDRESPCHVKLLRS----QKVVYISCGEEHTAVLTKSGG 262
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYAW 307
V+T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG H+ A S G +YA+
Sbjct: 263 VFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAF 319
Query: 308 GGSQAGQLGLG 318
G GQLG G
Sbjct: 320 GCGTRGQLGTG 330
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 110/336 (32%), Positives = 163/336 (48%), Gaps = 40/336 (11%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ--LQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG + FGQ G G+ PE + VK ++CG + + + E DG +
Sbjct: 1 MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLE----DGEVY 56
Query: 141 TSRLWVWGQ----NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
T L GQ ++GS P L GA I+ V+CG H VALS+ G + +WG
Sbjct: 57 TCGLNTKGQLGHESEGSK-PELI-GALAGQHIV-HVACGESHSVALSDQGQVFSWGAGSD 113
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG + + PR+IK + + I Q+SCG +H A++ +G+ +TWG S
Sbjct: 114 GQLGLTTIEDAVTVPRLIKKLNQ--------QTILQISCGNWHCLALAADGQFFTWGQNS 165
Query: 257 VGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
GQLG C Q+ P+RV +LDGI + VA GG HS AL+ GA++ WG + +G
Sbjct: 166 YGQLGLGKECPSQAS-----PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSG 220
Query: 314 QLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNS 373
QLGL + ES + + L+ V ++CG HT V + G + +G S
Sbjct: 221 QLGLSDERD------RESPCHVK----LLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 374 YGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
GQ ++ P V +G EV ++A G H+
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHT 306
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 133/460 (28%), Positives = 205/460 (44%), Gaps = 78/460 (16%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFT 85
WGY+ GQ G G Q+ IP+ P+++G N + ++ACG H+ + DG ++T
Sbjct: 4 WGYSSFGQPG-IGSNLQVIIPE---PQVYGFIHDRNVK--EVACGGNHSVFLLEDGEVYT 57
Query: 86 WGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE--NDGTISTSR 143
G N GQLG +E + PE + L + + ++CG + A+++ + + G S +
Sbjct: 58 CGLNTKGQLGHESEGSK--PELIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQ 115
Query: 144 LWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGI 203
L + PRL TI+ Q+SCG+ H +AL+ G WG N YGQLG G
Sbjct: 116 LGLTTIEDAVTVPRLI-KKLNQQTIL-QISCGNWHCLALAADGQFFTWGQNSYGQLGLGK 173
Query: 204 TCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHC 263
C P+ +K LD P + QV+ G HS A+S +G V+ WG S GQLG
Sbjct: 174 ECPSQASPQRVKS----LDGIP----LAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLS 225
Query: 264 SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG------- 316
D+E P V L + ++CG H+ LT G ++ +G GQLG
Sbjct: 226 D--ERDRE-SPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282
Query: 317 LGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYG 375
+ P+ R L+ +E V +ACG HTL ++ G I+ +G + G
Sbjct: 283 VNPR-RVLELMGSE----------------VSQIACGRHHTLAFVPSSGMIYAFGCGTRG 325
Query: 376 QAANEKSTYAWYPSPVD--WCVGEVRKLAAGGGHSAVLADACSLKELCEFRLAESVTLSN 433
Q + PSPV W AA G + DA C++ + + +
Sbjct: 326 QLGTGHTCNVKCPSPVKGHW--------AAHNGQLSGKPDA------CKYHIVKHIF--- 368
Query: 434 ASEIEDVASRTGSEALARLCERLREHSLHGDEFDCDDDTR 473
+G + LC + E+SL D+F ++TR
Sbjct: 369 ----------SGGDQTFVLCSK-YENSLPADDFRTINETR 397
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 93/204 (45%), Gaps = 14/204 (6%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A + WG N GQ G G+E + Q L G P +A G H+ A
Sbjct: 152 LAADGQFFTWGQNSYGQLGL-GKECPSQASPQRVKSLDGIPLA------QVAAGGAHSFA 204
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP--RE 134
++ G +F WG N GQLG E R+ P VK L+S+ V ISCG TA + +
Sbjct: 205 LSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVF 264
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGY 193
G S +L N N PR + + Q++CG H +A + G++ A+G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVN-PRRVLELM--GSEVSQIACGRHHTLAFVPSSGMIYAFGC 321
Query: 194 NEYGQLGRGITCEGLQGPRVIKGY 217
GQLG G TC ++ P +KG+
Sbjct: 322 GTRGQLGTGHTC-NVKCPSPVKGH 344
>gi|442319690|ref|YP_007359711.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441487332|gb|AGC44027.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 747
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 122/410 (29%), Positives = 173/410 (42%), Gaps = 75/410 (18%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQL---RIPKQLPPELFGCPAGANSRWLDIACGHEH 73
+ + A++ WG N R RQL + L P G G + + G +H
Sbjct: 314 VRSDGAVWAWGDN---------RYRQLGNGNMTSSLLPIQAGLSGG-----ITLVAGFKH 359
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
+ + +DGT+++WG N FGQLGDGT + R P +V T + P
Sbjct: 360 SLTLRADGTVWSWGDNVFGQLGDGTYQPRMSPVRV----------------ATTTLGNPG 403
Query: 134 ENDGTI------STSRLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVA 181
G + S R+W WG N+ G +L A T T V G+ H V
Sbjct: 404 VASGQLHSVYRDSAGRVWSWGDNEDGQLGNGIGADKLT-PALTGLTGAVSVVAGNRHTVV 462
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
L + AWG N G++G G Q RV+ L IT +S G YHS
Sbjct: 463 LKGDTTVWAWGVNSRGEVGDGTNANTSQPVRVLG-----------LSGITAISAGAYHSL 511
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A+ +G V+ WG GQLG+ ++ P +V L G + +A G HS AL
Sbjct: 512 ALRTDGTVWAWGFNRYGQLGNGGTVDQNQ---PVQVAGLSG--VTAIAAGHSHSLALCGD 566
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
G ++AWG + GQ+G G T ++ ++P ++ V + V + G H+L
Sbjct: 567 GTVWAWGYNFDGQIGSG--TNNWHILPVQA----------VGLSSVTAITAGGYHSLALR 614
Query: 362 RDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
DG + WGYN GQ N P PV G V +AAG HS L
Sbjct: 615 SDGTVWSWGYNGSGQLGNGALASLNAPGPVSNLTGVV-SIAAGDYHSLAL 663
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 110/365 (30%), Positives = 161/365 (44%), Gaps = 66/365 (18%)
Query: 23 IYVWGYNHSGQTGRK-GRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++ WG N GQ G G ++ L P L G + + G+ HT + D
Sbjct: 420 VWSWGDNEDGQLGNGIGADK-------LTPALTGLTGA-----VSVVAGNRHTVVLKGDT 467
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
T++ WG N G++GDGT P +V L + +IS GA+ + A+ DGT+
Sbjct: 468 TVWAWGVNSRGEVGDGTNANTSQPVRVLGLSG--ITAISAGAYHSLAL----RTDGTV-- 519
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVS---------CGSVHVVALSECGLLQAWG 192
W WG N+ + +L G QV+ G H +AL G + AWG
Sbjct: 520 ---WAWGFNR---YGQLGNGGTVDQNQPVQVAGLSGVTAIAAGHSHSLALCGDGTVWAWG 573
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
YN GQ+G G + +A L +T ++ G YHS A+ +G V++W
Sbjct: 574 YNFDGQIGSGT-----------NNWHILPVQAVGLSSVTAITAGGYHSLALRSDGTVWSW 622
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G GQLG+ +L S + P V L G+ +A G HS AL S G + AWG +
Sbjct: 623 GYNGSGQLGNGALASLNA---PGPVSNLTGVV--SIAAGDYHSLALRSDGTVRAWGFNFD 677
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILVV-PNGVQLVACGHSHTLVYMRDGRIHGWGY 371
GQ+G G T R++P++V +GV V G H++ DG WG
Sbjct: 678 GQIGDGSLTN-------------RHVPVMVAGMSGVVSVIAGDHHSMAMRSDGTTWAWGA 724
Query: 372 NSYGQ 376
N+ GQ
Sbjct: 725 NTEGQ 729
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 125/445 (28%), Positives = 187/445 (42%), Gaps = 96/445 (21%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++ WG N SGQ G + P ++ G + ++ G H A
Sbjct: 215 LRADGTVWAWGDNRSGQLGDG-----TVTTRGNPLQVLGLTGV-----VTLSAGASHCVA 264
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ S+GT +TWG N GQLGDGT R P +V ++ + +++ H A +D
Sbjct: 265 LRSNGTAWTWGLNTMGQLGDGTTTQRSVPAQVG--LTDVMAAVAGNYHSLAV-----RSD 317
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQ--------VSCGSVHVVALSECGLL 188
G + W WG N+ + +L G T + + Q + G H + L G +
Sbjct: 318 GAV-----WAWGDNR---YRQLGNGNMTSSLLPIQAGLSGGITLVAGFKHSLTLRADGTV 369
Query: 189 QAWGYNEYGQLGRG----------ITCEGLQGPRVIKG--YAKFLDEA------------ 224
+WG N +GQLG G + L P V G ++ + D A
Sbjct: 370 WSWGDNVFGQLGDGTYQPRMSPVRVATTTLGNPGVASGQLHSVYRDSAGRVWSWGDNEDG 429
Query: 225 ------------PELEKIT---QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGD 269
P L +T V G H+ + + V+ WG+ S G++G + +
Sbjct: 430 QLGNGIGADKLTPALTGLTGAVSVVAGNRHTVVLKGDTTVWAWGVNSRGEVGDGTNANTS 489
Query: 270 KELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPN 329
+ P RV+ L G I ++ G HS AL + G ++AWG ++ GQLG G
Sbjct: 490 Q---PVRVLGLSG--ITAISAGAYHSLALRTDGTVWAWGFNRYGQLGNG----------- 533
Query: 330 ESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYP 388
T +N P+ V +GV +A GHSH+L DG + WGYN GQ T W+
Sbjct: 534 --GTVDQNQPVQVAGLSGVTAIAAGHSHSLALCGDGTVWAWGYNFDGQIG--SGTNNWHI 589
Query: 389 SPVDWCVG--EVRKLAAGGGHSAVL 411
PV VG V + AGG HS L
Sbjct: 590 LPVQ-AVGLSSVTAITAGGYHSLAL 613
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 172/383 (44%), Gaps = 63/383 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +++ WG+N GQ G L P ++ + +A G H+ A
Sbjct: 65 VHSDGSVWAWGFNRQGQLGNG-----LFTNSPTPVKVKNLTDA-----VAVASGDSHSLA 114
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ SDGT++ WG N GQLG G+ P +V+ L V S++ G +AA+ +D
Sbjct: 115 LRSDGTVWAWGDNYSGQLGTGSTAVSAEPVQVQGLSG--VLSVASGFAHSAAL----RSD 168
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT-PNTI-----ICQVSCGSVHVVALSECGLLQA 190
GT+ W WG N+ L G+ + P + + V+ G +AL G + A
Sbjct: 169 GTV-----WAWGDNRYRQLGPLTAGSSSVPVQVPGLGGVIAVAAGGNTTLALRADGTVWA 223
Query: 191 WGYNEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
WG N GQLG G +T G P + G L + +S G H A+ NG
Sbjct: 224 WGDNRSGQLGDGTVTTRG--NPLQVLG----------LTGVVTLSAGASHCVALRSNGTA 271
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF-IKDVACGGVHSCALTSKGALYAWG 308
+TWGL ++GQL GD R V A G+ + G HS A+ S GA++AWG
Sbjct: 272 WTWGLNTMGQL-------GDGTTTQRSVPAQVGLTDVMAAVAGNYHSLAVRSDGAVWAWG 324
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHG 368
++ QLG G T SL+P ++ + G+ LVA G H+L DG +
Sbjct: 325 DNRYRQLGNGNMTS--SLLPIQAG----------LSGGITLVA-GFKHSLTLRADGTVWS 371
Query: 369 WGYNSYGQAANEKSTYAWYPSPV 391
WG N +GQ + TY SPV
Sbjct: 372 WGDNVFGQLGD--GTYQPRMSPV 392
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 142/318 (44%), Gaps = 45/318 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + ++ WG N G+ G G P ++ L G A I+ G H+ A
Sbjct: 463 LKGDTTVWAWGVNSRGEVG-DGTNANTSQPVRVL-GLSGITA--------ISAGAYHSLA 512
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ +DGT++ WG N +GQLG+G + P +V L V +I+ G + A+ D
Sbjct: 513 LRTDGTVWAWGFNRYGQLGNGGTVDQNQPVQVAGLSG--VTAIAAGHSHSLALC----GD 566
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
GT+ W WG N G+N + + + ++ G H +AL G + +
Sbjct: 567 GTV-----WAWGYNFDGQIGSGTNNWHILPVQAVGLSSVTAITAGGYHSLALRSDGTVWS 621
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WGYN GQLG G L P + L + ++ G+YHS A+ +G V
Sbjct: 622 WGYNGSGQLGNGALAS-LNAPGPVS----------NLTGVVSIAAGDYHSLALRSDGTVR 670
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
WG GQ+G SL +P V + G+ V G HS A+ S G +AWG +
Sbjct: 671 AWGFNFDGQIGDGSLT---NRHVPVMVAGMSGVV--SVIAGDHHSMAMRSDGTTWAWGAN 725
Query: 311 QAGQLGLGPQTRSFSLIP 328
GQLG G TR+ S+IP
Sbjct: 726 TEGQLGDG--TRNDSIIP 741
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 151/366 (41%), Gaps = 62/366 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N+SGQ G G P Q+ L G L +A G H+AA+ SDGT
Sbjct: 121 VWAWGDNYSGQLG-TGSTAVSAEPVQVQ-GLSGV--------LSVASGFAHSAALRSDGT 170
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG N + QLG T P +V L V +++ G + T A+ DGT+
Sbjct: 171 VWAWGDNRYRQLGPLTAGSSSVPVQVPGLGG--VIAVAAGGNTTLAL----RADGTV--- 221
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPN---------TIICQVSCGSVHVVALSECGLLQAWGY 193
W WG N+ G T T + +S G+ H VAL G WG
Sbjct: 222 --WAWGDNRSGQLGD---GTVTTRGNPLQVLGLTGVVTLSAGASHCVALRSNGTAWTWGL 276
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
N GQLG G T + + + L + G YHS AV +G V+ WG
Sbjct: 277 NTMGQLGDGTTTQ------------RSVPAQVGLTDVMAAVAGNYHSLAVRSDGAVWAWG 324
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
QLG+ ++ S LLP + GI + G HS L + G +++WG + G
Sbjct: 325 DNRYRQLGNGNMTS---SLLPIQAGLSGGITL---VAGFKHSLTLRADGTVWSWGDNVFG 378
Query: 314 QLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNS 373
QLG G S + + T G VA G H++ GR+ WG N
Sbjct: 379 QLGDGTYQPRMSPVRVATTTL-----------GNPGVASGQLHSVYRDSAGRVWSWGDNE 427
Query: 374 YGQAAN 379
GQ N
Sbjct: 428 DGQLGN 433
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 137/329 (41%), Gaps = 48/329 (14%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++ G H+ V SDG+++ WG N GQLG+G P KVK L ++ V S +H
Sbjct: 55 LSLGQYHSVGVHSDGSVWAWGFNRQGQLGNGLFTNSPTPVKVKNL-TDAVAVASGDSHSL 113
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-------ICQVSCGSVHV 179
A +DGT+ W WG N A + + + V+ G H
Sbjct: 114 A-----LRSDGTV-----WAWGDNYSGQLGTGS-TAVSAEPVQVQGLSGVLSVASGFAHS 162
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
AL G + AWG N Y QLG + G + + P L + V+ G
Sbjct: 163 AALRSDGTVWAWGDNRYRQLG-----------PLTAGSSSVPVQVPGLGGVIAVAAGGNT 211
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT 299
+ A+ +G V+ WG GQLG ++ + P +V+ L G+ ++ G H AL
Sbjct: 212 TLALRADGTVWAWGDNRSGQLGDGTVTTRGN---PLQVLGLTGVVT--LSAGASHCVALR 266
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
S G + WG + GQLG G T+ R++P V V G+ H+L
Sbjct: 267 SNGTAWTWGLNTMGQLGDGTTTQ-------------RSVPAQVGLTDVMAAVAGNYHSLA 313
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYP 388
DG + WG N Y Q N T + P
Sbjct: 314 VRSDGAVWAWGDNRYRQLGNGNMTSSLLP 342
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 120/406 (29%), Positives = 166/406 (40%), Gaps = 80/406 (19%)
Query: 23 IYVWGYNHSGQTGRKGRERQL--------RIPKQLPPELFGCPAGANSRWLDIACGHEHT 74
++ WG N R RQL +P Q+P L G A +A G T
Sbjct: 171 VWAWGDN---------RYRQLGPLTAGSSSVPVQVP-GLGGVIA--------VAAGGNTT 212
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPR 133
A+ +DGT++ WG N GQLGDGT R +P +V L V ++S GA HC A
Sbjct: 213 LALRADGTVWAWGDNRSGQLGDGTVTTRGNPLQVLGLTG--VVTLSAGASHCVA-----L 265
Query: 134 ENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVS--------CGSVHVVALSEC 185
++GT W WG N +L G T ++ QV G+ H +A+
Sbjct: 266 RSNGTA-----WTWGLN---TMGQLGDGTTTQRSVPAQVGLTDVMAAVAGNYHSLAVRSD 317
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + AWG N Y QLG G L L L + G HS +
Sbjct: 318 GAVWAWGDNRYRQLGNGNMTSSL------------LPIQAGLSGGITLVAGFKHSLTLRA 365
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G V++WG GQLG + Q + P R VA + VA G +HS S G ++
Sbjct: 366 DGTVWSWGDNVFGQLGDGTYQ---PRMSPVR-VATTTLGNPGVASGQLHSVYRDSAGRVW 421
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
+WG ++ GQLG G + P L G V G+ HT+V D
Sbjct: 422 SWGDNEDGQLGNGIGADKLT-------------PALTGLTGAVSVVAGNRHTVVLKGDTT 468
Query: 366 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
+ WG NS G+ + + P V G + ++AG HS L
Sbjct: 469 VWAWGVNSRGEVGDGTNANTSQPVRVLGLSG-ITAISAGAYHSLAL 513
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 107/243 (44%), Gaps = 29/243 (11%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ ++S G H V + G + AWG+N GQLG G+ P +K L
Sbjct: 52 VARLSLGQYHSVGVHSDGSVWAWGFNRQGQLGNGLFTN---SPTPVK--------VKNLT 100
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
V+ G+ HS A+ +G V+ WG GQLG S + P +V L G+ V
Sbjct: 101 DAVAVASGDSHSLALRSDGTVWAWGDNYSGQLGTGSTAVSAE---PVQVQGLSGVL--SV 155
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
A G HS AL S G ++AWG ++ Q LGP T S +P + +P L GV
Sbjct: 156 ASGFAHSAALRSDGTVWAWGDNRYRQ--LGPLTAGSSSVPVQ-------VPGL---GGVI 203
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
VA G + TL DG + WG N GQ + T P V G V L+AG H
Sbjct: 204 AVAAGGNTTLALRADGTVWAWGDNRSGQLGDGTVTTRGNPLQVLGLTGVV-TLSAGASHC 262
Query: 409 AVL 411
L
Sbjct: 263 VAL 265
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 86/201 (42%), Gaps = 35/201 (17%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WGYN GQ G + LP + G S I G H+ A+ SDGT
Sbjct: 569 VWAWGYNFDGQIGSGTNNWHI-----LPVQAVGL-----SSVTAITAGGYHSLALRSDGT 618
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+++WG N GQLG+G P V L V SI+ G + + A+ +DGT+
Sbjct: 619 VWSWGYNGSGQLGNGALASLNAPGPVSNLTG--VVSIAAGDYHSLAL----RSDGTV--- 669
Query: 143 RLWVWGQNQGSNFP-RLFWGAFTPNTI---------ICQVSCGSVHVVALSECGLLQAWG 192
R W G NF ++ G+ T + + V G H +A+ G AWG
Sbjct: 670 RAW------GFNFDGQIGDGSLTNRHVPVMVAGMSGVVSVIAGDHHSMAMRSDGTTWAWG 723
Query: 193 YNEYGQLGRGITCEGLQGPRV 213
N GQLG G + + RV
Sbjct: 724 ANTEGQLGDGTRNDSIIPVRV 744
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 10/87 (11%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+ WG+N GQ G + +P + G S + + G H+ A+ SDGT
Sbjct: 669 VRAWGFNFDGQIGDGSLTN-----RHVPVMVAGM-----SGVVSVIAGDHHSMAMRSDGT 718
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVK 109
+ WGAN GQLGDGT P +V+
Sbjct: 719 TWAWGANTEGQLGDGTRNDSIIPVRVE 745
>gi|354500120|ref|XP_003512150.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
[Cricetulus griseus]
Length = 631
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 153/312 (49%), Gaps = 52/312 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G ER+ P+Q+ A A+ + +ACG H+ A++ G
Sbjct: 55 VYTCGVNSKGQLGH---EREGNKPEQIG-------ALADQHIVHVACGESHSLALSDRGQ 104
Query: 83 LFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
LF+WGA GQLG TE+ P +++L + + +SCG HC A A DG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA-----DG--- 156
Query: 141 TSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
+ + WG+N G FP +P + + QV+ G H ALS G
Sbjct: 157 --QFFTWGKNSHGQLGLGKEFP----SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ WG N GQLG + R + K L +K+ +SCGE H+A ++++G
Sbjct: 211 VFGWGMNNAGQLGLSD-----EKDRESPCHVKLL----RTQKVVYISCGEEHTAVLTKSG 261
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYA 306
V+T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG H+ A S G +YA
Sbjct: 262 GVFTFGAGSCGQLGHGSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 307 WGGSQAGQLGLG 318
+G GQLG G
Sbjct: 319 FGCGARGQLGTG 330
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 167/369 (45%), Gaps = 34/369 (9%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFT 85
WGY GQ G R + Q+ C ++ ++ACG H+ + DG ++T
Sbjct: 4 WGYWSLGQPGISSNLRGIVAEPQV------CRFVSDRSIKEVACGGNHSVFLLEDGEVYT 57
Query: 86 WGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE--NDGTISTSR 143
G N GQLG EG K PE++ L + + ++CG + A+++ + + G S +
Sbjct: 58 CGVNSKGQLGH-EREGNK-PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQ 115
Query: 144 LWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGI 203
L + PRL TI+ QVSCG+ H +AL+ G WG N +GQLG G
Sbjct: 116 LGLMTTEDSVAVPRLIQ-KLNQQTIL-QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173
Query: 204 TCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHC 263
P+ ++ L+ P + QV+ G HS A+S +G V+ WG+ + GQLG
Sbjct: 174 EFPSQTSPQRVRS----LEGIP----LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG-- 223
Query: 264 SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRS 323
L P V L + ++CG H+ LT G ++ +G GQLG G
Sbjct: 224 -LSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSM--- 279
Query: 324 FSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQAANEKS 382
N+ R + ++ + V +ACG HTL ++ G I+ +G + GQ +
Sbjct: 280 -----NDEVNPRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 383 TYAWYPSPV 391
PSPV
Sbjct: 333 CNVKCPSPV 341
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 159/341 (46%), Gaps = 32/341 (9%)
Query: 83 LFTWGANEFGQLGDGTEEG--RKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG GQ G + P+ + + +K ++CG + + + E DG +
Sbjct: 1 MLCWGYWSLGQPGISSNLRGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLE----DGEVY 56
Query: 141 TSRLWVWGQ---NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + GQ + N P GA I+ V+CG H +ALS+ G L +WG G
Sbjct: 57 TCGVNSKGQLGHEREGNKPEQI-GALADQHIV-HVACGESHSLALSDRGQLFSWGAGSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG T + + PR+I+ + + I QVSCG +H A++ +G+ +TWG S
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQ--------QTILQVSCGNWHCLALAADGQFFTWGKNSH 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG + + P+RV +L+GI + VA GG HS AL+ GA++ WG + AGQLGL
Sbjct: 167 GQLGLG--KEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+ ES + + L+ V ++CG HT V + G + +G S GQ
Sbjct: 225 SDEK------DRESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Query: 378 ANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
+ P V +G EV ++A G H+ + L
Sbjct: 275 GHGSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 108/252 (42%), Gaps = 35/252 (13%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+ ++ WG GQ G E + +P+ + L ++CG+ H A+A+
Sbjct: 102 RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL-------NQQTILQVSCGNWHCLALAA 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG FTWG N GQLG G E + P++V+ L+ + ++ G + A++
Sbjct: 155 DGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS-------- 206
Query: 139 ISTSRLWVWGQNQGSNF--------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
+ ++ WG N + +SCG H L++ G +
Sbjct: 207 -LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFT 265
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEV 249
+G GQLG G + + RV++ ++TQ++CG H+ A V +G +
Sbjct: 266 FGAGSCGQLGHGSMNDEVNPRRVLELMG---------SEVTQIACGRQHTLAFVPSSGLI 316
Query: 250 YTWGLGSVGQLG 261
Y +G G+ GQLG
Sbjct: 317 YAFGCGARGQLG 328
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 94/204 (46%), Gaps = 14/204 (6%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A + WG N GQ G G+E + Q L G P +A G H+ A
Sbjct: 152 LAADGQFFTWGKNSHGQLGL-GKEFPSQTSPQRVRSLEGIPLA------QVAAGGAHSFA 204
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP--RE 134
++ G +F WG N GQLG E+ R+ P VK L+++ V ISCG TA + +
Sbjct: 205 LSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVF 264
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGY 193
G S +L N N R+ + + Q++CG H +A + GL+ A+G
Sbjct: 265 TFGAGSCGQLGHGSMNDEVNPRRVLE---LMGSEVTQIACGRQHTLAFVPSSGLIYAFGC 321
Query: 194 NEYGQLGRGITCEGLQGPRVIKGY 217
GQLG G TC ++ P +KGY
Sbjct: 322 GARGQLGTGHTCN-VKCPSPVKGY 344
>gi|67623229|ref|XP_667897.1| uvb-resistance protein uvr8 [Cryptosporidium hominis TU502]
gi|54659070|gb|EAL37667.1| uvb-resistance protein uvr8 [Cryptosporidium hominis]
Length = 487
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 126/389 (32%), Positives = 179/389 (46%), Gaps = 78/389 (20%)
Query: 23 IYVWGYNHSGQTGRKGRERQL--RIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
+ +WGY GQ G E L R+ L + +AC HTAA+ S+
Sbjct: 63 LILWGYGGCGQLGFGNLEDCLVPRVNLSL------------KNVVQVACSDRHTAAILSN 110
Query: 81 GTLFTWGANEFGQLGDGTEEGR------KHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
G L+TWG ++ G+LG G E P KVK L+ E V +SCG++ T + + +
Sbjct: 111 GELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDK- 169
Query: 135 NDGTISTSRLWVWGQN-QGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVAL 182
+ WG QG RL G FTP I I ++SCG H L
Sbjct: 170 --------KALTWGLGLQG----RLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAIL 217
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
G L +G +G+LG G T + L PR+++G + + +IT+VS G HSAA
Sbjct: 218 LVTGKLYMFGGGAFGKLGFGSTDDVLI-PRLLEGPLEDI-------QITKVSLGSQHSAA 269
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
V++ G+VYTWG G G+LGH L P+R+ L+ FI D++CG HS AL+ G
Sbjct: 270 VTKCGKVYTWGQG--GRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVG 327
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
+Y WG ++ +G G Q + PN + PIL N VQ+V C SH++
Sbjct: 328 DIYTWGMTK--NIGHGIQ----GIHPNMPSKH----PILQNKNIVQVV-CSSSHSIALSD 376
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
G A +KS W P +
Sbjct: 377 IG------------ALVQKSPETWKPQSL 393
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 141/303 (46%), Gaps = 39/303 (12%)
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
S + WG++E+GQ G EE P V L+ + +SCG++ +AAI N G
Sbjct: 6 SKSGVVVWGSSEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAIT----NSG 61
Query: 138 TISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECGLLQAWG 192
+ LW +G F L P + QV+C H A+ G L WG
Sbjct: 62 DLI---LWGYGGCGQLGFGNL-EDCLVPRVNLSLKNVVQVACSDRHTAAILSNGELYTWG 117
Query: 193 YNEYGQLGRG-----ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
++ G+LG G I+ + P +K A E EK+ QVSCG YH+ ++++
Sbjct: 118 CSKNGKLGHGQFELSISNNVVSQPMKVK--------ALEGEKVIQVSCGSYHTGCLTDDK 169
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
+ TWGLG G+LGH Q P+ + +L G+ IK+++CGG H+ L G LY +
Sbjct: 170 KALTWGLGLQGRLGHGDTQD---IFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMF 226
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
GG G+LG G + LIP + +I I V G Q H+ + G+++
Sbjct: 227 GGGAFGKLGFG--STDDVLIPRLLEGPLEDIQITKVSLGSQ-------HSAAVTKCGKVY 277
Query: 368 GWG 370
WG
Sbjct: 278 TWG 280
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 134/307 (43%), Gaps = 42/307 (13%)
Query: 12 RPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGH 71
R I + +Y WG + +G+ G + +L I + + A + + ++CG
Sbjct: 102 RHTAAILSNGELYTWGCSKNGKLGHG--QFELSISNNVVSQPMKVKALEGEKVIQVSCGS 159
Query: 72 EHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
HT + D TWG G+LG G + P+ ++ L +K ISCG H TA +
Sbjct: 160 YHTGCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAIL-- 217
Query: 132 PRENDGTISTSRLWV----------WGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA 181
+ T +L++ +G PRL G + I +VS GS H A
Sbjct: 218 -------LVTGKLYMFGGGAFGKLGFGSTDDVLIPRLLEGPL-EDIQITKVSLGSQHSAA 269
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLD--EAPELEK--ITQVSCGE 237
+++CG + WG + G+LG GP FL LEK I +SCG
Sbjct: 270 VTKCGKVYTWG--QGGRLGH-----IFNGPE-----HDFLSPKRLSNLEKAFIVDISCGN 317
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
HS A+S+ G++YTWG+ +GH +Q G +P + L I V C HS A
Sbjct: 318 SHSVALSDVGDIYTWGM--TKNIGH-GIQ-GIHPNMPSKHPILQNKNIVQVVCSSSHSIA 373
Query: 298 LTSKGAL 304
L+ GAL
Sbjct: 374 LSDIGAL 380
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 119/249 (47%), Gaps = 26/249 (10%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I +VSCGS + A++ G L WGY GQLG G E PRV L+
Sbjct: 44 ISKVSCGSNYSAAITNSGDLILWGYGGCGQLGFG-NLEDCLVPRV----------NLSLK 92
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQ---SGDKELLPRRVVALDGIFI 285
+ QV+C + H+AA+ NGE+YTWG G+LGH + S + P +V AL+G +
Sbjct: 93 NVVQVACSDRHTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKV 152
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
V+CG H+ LT WG G+LG G F+ ES +PI
Sbjct: 153 IQVSCGSYHTGCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIES---LAGLPI----- 204
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVR--KLAA 403
+ ++CG HT + + G+++ +G ++G+ + P ++ + +++ K++
Sbjct: 205 --KEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGSTDDVLIPRLLEGPLEDIQITKVSL 262
Query: 404 GGGHSAVLA 412
G HSA +
Sbjct: 263 GSQHSAAVT 271
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 116/232 (50%), Gaps = 21/232 (9%)
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
LS+ G++ WG +EYGQ G +G V G +D L I++VSCG +SA
Sbjct: 5 LSKSGVV-VWGSSEYGQ-------HGSKGEEVSPG-PHLVDGLRHLSSISKVSCGSNYSA 55
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A++ +G++ WG G GQLG +L+ L+PR ++L + VAC H+ A+ S
Sbjct: 56 AITNSGDLILWGYGGCGQLGFGNLEDC---LVPRVNLSLKNVV--QVACSDRHTAAILSN 110
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSL-IPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
G LY WG S+ G+LG G F L I N + + L +Q V+CG HT
Sbjct: 111 GELYTWGCSKNGKLGHG----QFELSISNNVVSQPMKVKALEGEKVIQ-VSCGSYHTGCL 165
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
D + WG G+ + + + P ++ G +++++ GG H+A+L
Sbjct: 166 TDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAIL 217
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 19/136 (13%)
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP 344
I V+CG +S A+T+ G L WG GQLG G N D + L +
Sbjct: 44 ISKVSCGSNYSAAITNSGDLILWGYGGCGQLGFG----------NLEDCLVPRVN-LSLK 92
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEK------STYAWYPSPVDWCVGE- 397
N VQ VAC HT + +G ++ WG + G+ + + + P V GE
Sbjct: 93 NVVQ-VACSDRHTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGEK 151
Query: 398 VRKLAAGGGHSAVLAD 413
V +++ G H+ L D
Sbjct: 152 VIQVSCGSYHTGCLTD 167
>gi|327273047|ref|XP_003221294.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Anolis
carolinensis]
Length = 1081
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/342 (31%), Positives = 156/342 (45%), Gaps = 36/342 (10%)
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQ----LQSEFVKSISCGAHCTAAIAEPRENDG 137
L+ WG GQLG G EG P + + V ++CG T + R++ G
Sbjct: 1 MLYCWGEGSAGQLGLGKGEGVSGPVPFRPGPRAPADQAVVLVACGERHTLLL---RDDGG 57
Query: 138 TIS--------TSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQ 189
S R GQ + S P L T + VSCG H +A+ G +
Sbjct: 58 VASCGDNSRGQLGRRLPSGQEKRSYGPELIQALETQKVV--HVSCGKEHSLAVCNKGRVY 115
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
+WG +GQLG G + L P+ I +K+ K+ QV+CG HS A++ +G +
Sbjct: 116 SWGAGTFGQLGTGELGDRLI-PKTINALSKY--------KVIQVACGHDHSIALTNDGRI 166
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
++WG GQLG S P++V ALDGI + VA GG HS AL+ G +Y WG
Sbjct: 167 FSWGQNIHGQLGLGKDISSQAS--PQQVSALDGIPLAQVAAGGAHSFALSLSGVVYGWGR 224
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGW 369
+ A QLGL + S R++ V V+CG HT V ++G ++ +
Sbjct: 225 NNAHQLGLSQAKPKEQIFKPYSIAALRSL-------DVAFVSCGAEHTAVLTQNGSVYTF 277
Query: 370 GYNSYGQAA-NEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAV 410
G +S GQ N S+ + P V+W G V LA G H+ V
Sbjct: 278 GDDSAGQLGRNSSSSPKFGPQKVEWIDGPVSLLACGSYHTLV 319
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 160/352 (45%), Gaps = 49/352 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG +GQ G G+ + P P G A A+ + +ACG HT + DG
Sbjct: 2 LYCWGEGSAGQLGL-GKGEGVSGPVPFRP---GPRAPADQAVVLVACGERHTLLLRDDGG 57
Query: 83 LFTWGANEFGQLG----DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
+ + G N GQLG G E+ PE ++ L+++ V +SCG + A+ N G
Sbjct: 58 VASCGDNSRGQLGRRLPSGQEKRSYGPELIQALETQKVVHVSCGKEHSLAVC----NKG- 112
Query: 139 ISTSRLWVWGQNQGSNFPRLFWGAF----TPNTI-------ICQVSCGSVHVVALSECGL 187
R++ WG F +L G P TI + QV+CG H +AL+ G
Sbjct: 113 ----RVYSWG---AGTFGQLGTGELGDRLIPKTINALSKYKVIQVACGHDHSIALTNDGR 165
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ +WG N +GQLG G P+ + LD P + QV+ G HS A+S +G
Sbjct: 166 IFSWGQNIHGQLGLGKDISSQASPQQVSA----LDGIP----LAQVAAGGAHSFALSLSG 217
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
VY WG + QLG + ++ P + AL + + V+CG H+ LT G++Y +
Sbjct: 218 VVYGWGRNNAHQLGLSQAKPKEQIFKPYSIAALRSLDVAFVSCGAEHTAVLTQNGSVYTF 277
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
G AGQLG + S F + + V L+ACG HTLV
Sbjct: 278 GDDSAGQLGRN----------SSSSPKFGPQKVEWIDGPVSLLACGSYHTLV 319
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 113/230 (49%), Gaps = 20/230 (8%)
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+L WG GQLG G EG+ GP + + AP + + V+CGE H+ + ++
Sbjct: 1 MLYCWGEGSAGQLGLG-KGEGVSGPVPFRPGPR----APADQAVVLVACGERHTLLLRDD 55
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
G V + G S GQLG L SG ++ P + AL+ + V+CG HS A+ +KG +
Sbjct: 56 GGVASCGDNSRGQLGR-RLPSGQEKRSYGPELIQALETQKVVHVSCGKEHSLAVCNKGRV 114
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 364
Y+WG GQLG G LIP + I L +Q VACGH H++ DG
Sbjct: 115 YSWGAGTFGQLGTG--ELGDRLIP-------KTINALSKYKVIQ-VACGHDHSIALTNDG 164
Query: 365 RIHGWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLA 412
RI WG N +GQ K + P V G + ++AAGG HS L+
Sbjct: 165 RIFSWGQNIHGQLGLGKDISSQASPQQVSALDGIPLAQVAAGGAHSFALS 214
>gi|126649317|ref|XP_001388330.1| uvb-resistance protein uvr8 [Cryptosporidium parvum Iowa II]
gi|32398856|emb|CAD98566.1| uvb-resistance protein uvr8, possible [Cryptosporidium parvum]
gi|126117424|gb|EAZ51524.1| uvb-resistance protein uvr8, putative [Cryptosporidium parvum Iowa
II]
Length = 487
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 120/356 (33%), Positives = 171/356 (48%), Gaps = 66/356 (18%)
Query: 23 IYVWGYNHSGQTGRKGRERQL--RIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
+ +WGY GQ G E L R+ L + +AC HTAA+ S+
Sbjct: 63 LILWGYGGCGQLGFGNLEDCLVPRVNLSL------------KNVIQVACSDRHTAAILSN 110
Query: 81 GTLFTWGANEFGQLGDGTEEGR------KHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
G L+TWG ++ G+LG G E P KVK L+ E V +SCG++ T + + +
Sbjct: 111 GELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDK- 169
Query: 135 NDGTISTSRLWVWGQN-QGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVAL 182
+ WG QG RL G FTP I I ++SCG H L
Sbjct: 170 --------KALTWGLGLQG----RLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAIL 217
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
G L +G +G+LG G T + L PR+++G + + +IT+VS G HSAA
Sbjct: 218 LVTGKLYMFGGGAFGKLGFGSTDDVLI-PRLLEGPLEDI-------QITKVSLGSQHSAA 269
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
V++ G+VYTWG G G+LGH L P+R+ L+ FI D++CG HS AL+ G
Sbjct: 270 VTKCGKVYTWGQG--GRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVG 327
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 358
+Y WG ++ +G G Q + PN + PIL N VQ+V C SH++
Sbjct: 328 DIYTWGMTK--NIGHGIQ----GIHPNMPSKH----PILQNKNIVQVV-CSSSHSI 372
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 140/303 (46%), Gaps = 39/303 (12%)
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
S + WG+ E+GQ G EE P V L+ + +SCG++ +AAI N G
Sbjct: 6 SKSGVVVWGSTEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAIT----NSG 61
Query: 138 TISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECGLLQAWG 192
+ LW +G F L P + QV+C H A+ G L WG
Sbjct: 62 DLI---LWGYGGCGQLGFGNL-EDCLVPRVNLSLKNVIQVACSDRHTAAILSNGELYTWG 117
Query: 193 YNEYGQLGRG-----ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
++ G+LG G I+ + P +K A E EK+ QVSCG YH+ ++++
Sbjct: 118 CSKNGKLGHGQFELSISNNVVSQPMKVK--------ALEGEKVIQVSCGSYHTGCLTDDK 169
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
+ TWGLG G+LGH Q P+ + +L G+ IK+++CGG H+ L G LY +
Sbjct: 170 KALTWGLGLQGRLGHGDTQD---IFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMF 226
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
GG G+LG G + LIP + +I I V G Q H+ + G+++
Sbjct: 227 GGGAFGKLGFG--STDDVLIPRLLEGPLEDIQITKVSLGSQ-------HSAAVTKCGKVY 277
Query: 368 GWG 370
WG
Sbjct: 278 TWG 280
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 134/307 (43%), Gaps = 42/307 (13%)
Query: 12 RPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGH 71
R I + +Y WG + +G+ G + +L I + + A + + ++CG
Sbjct: 102 RHTAAILSNGELYTWGCSKNGKLGHG--QFELSISNNVVSQPMKVKALEGEKVIQVSCGS 159
Query: 72 EHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
HT + D TWG G+LG G + P+ ++ L +K ISCG H TA +
Sbjct: 160 YHTGCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAIL-- 217
Query: 132 PRENDGTISTSRLWV----------WGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA 181
+ T +L++ +G PRL G + I +VS GS H A
Sbjct: 218 -------LVTGKLYMFGGGAFGKLGFGSTDDVLIPRLLEGPL-EDIQITKVSLGSQHSAA 269
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFL--DEAPELEK--ITQVSCGE 237
+++CG + WG + G+LG GP FL LEK I +SCG
Sbjct: 270 VTKCGKVYTWG--QGGRLGH-----IFNGPE-----HDFLSPKRLSNLEKAFIVDISCGN 317
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
HS A+S+ G++YTWG+ +GH +Q G +P + L I V C HS A
Sbjct: 318 SHSVALSDVGDIYTWGM--TKNIGH-GIQ-GIHPNMPSKHPILQNKNIVQVVCSSSHSIA 373
Query: 298 LTSKGAL 304
L+ GAL
Sbjct: 374 LSDIGAL 380
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 119/249 (47%), Gaps = 26/249 (10%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I +VSCGS + A++ G L WGY GQLG G E PRV L+
Sbjct: 44 ISKVSCGSNYSAAITNSGDLILWGYGGCGQLGFG-NLEDCLVPRV----------NLSLK 92
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQ---SGDKELLPRRVVALDGIFI 285
+ QV+C + H+AA+ NGE+YTWG G+LGH + S + P +V AL+G +
Sbjct: 93 NVIQVACSDRHTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKV 152
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
V+CG H+ LT WG G+LG G F+ ES +PI
Sbjct: 153 IQVSCGSYHTGCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIES---LAGLPI----- 204
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVR--KLAA 403
+ ++CG HT + + G+++ +G ++G+ + P ++ + +++ K++
Sbjct: 205 --KEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGSTDDVLIPRLLEGPLEDIQITKVSL 262
Query: 404 GGGHSAVLA 412
G HSA +
Sbjct: 263 GSQHSAAVT 271
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 115/232 (49%), Gaps = 21/232 (9%)
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
LS+ G++ WG EYGQ G +G V G +D L I++VSCG +SA
Sbjct: 5 LSKSGVV-VWGSTEYGQ-------HGSKGEEVSPG-PHLVDGLRHLSSISKVSCGSNYSA 55
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A++ +G++ WG G GQLG +L+ L+PR ++L + VAC H+ A+ S
Sbjct: 56 AITNSGDLILWGYGGCGQLGFGNLEDC---LVPRVNLSLKNVI--QVACSDRHTAAILSN 110
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSL-IPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
G LY WG S+ G+LG G F L I N + + L +Q V+CG HT
Sbjct: 111 GELYTWGCSKNGKLGHG----QFELSISNNVVSQPMKVKALEGEKVIQ-VSCGSYHTGCL 165
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
D + WG G+ + + + P ++ G +++++ GG H+A+L
Sbjct: 166 TDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAIL 217
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 59/136 (43%), Gaps = 19/136 (13%)
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP 344
I V+CG +S A+T+ G L WG GQLG G N D + L +
Sbjct: 44 ISKVSCGSNYSAAITNSGDLILWGYGGCGQLGFG----------NLEDCLVPRVN-LSLK 92
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEK------STYAWYPSPVDWCVGE- 397
N +Q VAC HT + +G ++ WG + G+ + + + P V GE
Sbjct: 93 NVIQ-VACSDRHTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGEK 151
Query: 398 VRKLAAGGGHSAVLAD 413
V +++ G H+ L D
Sbjct: 152 VIQVSCGSYHTGCLTD 167
>gi|386780812|ref|NP_001248295.1| probable E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|355687450|gb|EHH26034.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|355749437|gb|EHH53836.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca fascicularis]
gi|380817668|gb|AFE80708.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|383408291|gb|AFH27359.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
Length = 1050
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 153/312 (49%), Gaps = 52/312 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G ER+ P+Q+ A A+ + +ACG H+ A++ G
Sbjct: 55 VYTCGLNTKGQLGH---EREGNKPEQIG-------ALADQHIIHVACGESHSLALSDRGQ 104
Query: 83 LFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
LF+WGA GQLG TE+ P +++L + + +SCG HC A A DG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA-----DG--- 156
Query: 141 TSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
+ + WG+N G FP +P + + QV+ G H ALS G
Sbjct: 157 --QFFTWGKNSHGQLGLGKEFP----SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ WG N GQLG + R + K L +K+ +SCGE H+A ++++G
Sbjct: 211 VFGWGMNNAGQLGLSD-----EKDRESPCHVKLL----RTQKVVYISCGEEHTAVLTKSG 261
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYA 306
V+T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG H+ A S G +YA
Sbjct: 262 GVFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 307 WGGSQAGQLGLG 318
+G GQLG G
Sbjct: 319 FGCGARGQLGTG 330
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 161/341 (47%), Gaps = 32/341 (9%)
Query: 83 LFTWGANEFGQLGDGTE-EG-RKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG GQ G T +G P+ + VK ++CG + + + E DG +
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLE----DGEVY 56
Query: 141 TSRLWVWGQ---NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T L GQ + N P GA II V+CG H +ALS+ G L +WG G
Sbjct: 57 TCGLNTKGQLGHEREGNKPEQI-GALADQHII-HVACGESHSLALSDRGQLFSWGAGSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG T + + PR+I+ + + I QVSCG +H A++ +G+ +TWG S
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQ--------QTILQVSCGNWHCLALAADGQFFTWGKNSH 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG + + P+RV +L+GI + VA GG HS AL+ GA++ WG + AGQLGL
Sbjct: 167 GQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+ ES + + L+ V ++CG HT V + G + +G S GQ
Sbjct: 225 SDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Query: 378 ANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
++ P V +G EV ++A G H+ + L
Sbjct: 275 GHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 35/252 (13%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+ ++ WG GQ G E + +P+ + L ++CG+ H A+A+
Sbjct: 102 RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL-------NQQTILQVSCGNWHCLALAA 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG FTWG N GQLG G E + P++V+ L+ + ++ G + A++
Sbjct: 155 DGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-------- 206
Query: 139 ISTSRLWVWGQNQGSNF--------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
+ ++ WG N + +SCG H L++ G +
Sbjct: 207 -LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFT 265
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEV 249
+G GQLG + + RV++ ++TQ++CG H+ A V +G +
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGS---------EVTQIACGRQHTLAFVPSSGLI 316
Query: 250 YTWGLGSVGQLG 261
Y +G G+ GQLG
Sbjct: 317 YAFGCGARGQLG 328
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPE----LFGCPAGANSRWLDIACGHE 72
+ A + WG N GQ G G+E P Q P+ L G P +A G
Sbjct: 152 LAADGQFFTWGKNSHGQLGL-GKE----FPSQASPQRVRSLEGIPLA------QVAAGGA 200
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
H+ A++ G +F WG N GQLG E+ R+ P VK L+++ V ISCG TA + +
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260
Query: 133 --RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQ 189
G S +L N N PR + + Q++CG H +A + GL+
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGY 217
A+G GQLG G TC ++ P +KGY
Sbjct: 318 AFGCGARGQLGTGHTC-NVKCPSPVKGY 344
>gi|296196017|ref|XP_002745644.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Callithrix jacchus]
Length = 1050
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 153/312 (49%), Gaps = 52/312 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G ER+ P+Q+ A A+ + +ACG H+ A++ G
Sbjct: 55 VYTCGLNTKGQLGH---EREGNKPEQIG-------ALADQHIIHVACGESHSLALSDRGQ 104
Query: 83 LFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
LF+WGA GQLG TE+ P +++L + + +SCG HC A A DG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA-----DG--- 156
Query: 141 TSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
+ + WG+N G FP +P + + QV+ G H ALS G
Sbjct: 157 --QFFTWGKNSHGQLGLGKEFP----SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ WG N GQLG + R + K L +K+ +SCGE H+A ++++G
Sbjct: 211 VFGWGMNNAGQLGLSD-----EKDRESPCHVKLL----RTQKVVYISCGEEHTAVLTKSG 261
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYA 306
V+T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG H+ A S G +YA
Sbjct: 262 GVFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 307 WGGSQAGQLGLG 318
+G GQLG G
Sbjct: 319 FGCGARGQLGTG 330
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 161/341 (47%), Gaps = 32/341 (9%)
Query: 83 LFTWGANEFGQLGDGTE-EG-RKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG GQ G T +G P+ + VK ++CG + + + E DG +
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLE----DGEVY 56
Query: 141 TSRLWVWGQ---NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T L GQ + N P GA II V+CG H +ALS+ G L +WG G
Sbjct: 57 TCGLNTKGQLGHEREGNKPEQI-GALADQHII-HVACGESHSLALSDRGQLFSWGAGSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG T + + PR+I+ + + I QVSCG +H A++ +G+ +TWG S
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQ--------QTILQVSCGNWHCLALAADGQFFTWGKNSH 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG + + P+RV +L+GI + VA GG HS AL+ GA++ WG + AGQLGL
Sbjct: 167 GQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+ ES + + L+ V ++CG HT V + G + +G S GQ
Sbjct: 225 SDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Query: 378 ANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
++ P V +G EV ++A G H+ + L
Sbjct: 275 GHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 35/252 (13%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+ ++ WG GQ G E + +P+ + L ++CG+ H A+A+
Sbjct: 102 RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL-------NQQTILQVSCGNWHCLALAA 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG FTWG N GQLG G E + P++V+ L+ + ++ G + A++
Sbjct: 155 DGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-------- 206
Query: 139 ISTSRLWVWGQNQGSNF--------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
+ ++ WG N + +SCG H L++ G +
Sbjct: 207 -LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFT 265
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEV 249
+G GQLG + + RV++ ++TQ++CG H+ A V +G +
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMG---------SEVTQIACGRQHTLAFVPSSGLI 316
Query: 250 YTWGLGSVGQLG 261
Y +G G+ GQLG
Sbjct: 317 YAFGCGARGQLG 328
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPE----LFGCPAGANSRWLDIACGHE 72
+ A + WG N GQ G G+E P Q P+ L G P +A G
Sbjct: 152 LAADGQFFTWGKNSHGQLGL-GKE----FPSQASPQRVRSLEGIPLA------QVAAGGA 200
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
H+ A++ G +F WG N GQLG E+ R+ P VK L+++ V ISCG TA + +
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260
Query: 133 --RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQ 189
G S +L N N PR + + Q++CG H +A + GL+
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGY 217
A+G GQLG G TC ++ P +KGY
Sbjct: 318 AFGCGARGQLGTGHTC-NVKCPSPVKGY 344
>gi|402869928|ref|XP_003898995.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Papio anubis]
Length = 1050
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 153/312 (49%), Gaps = 52/312 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G ER+ P+Q+ A A+ + +ACG H+ A++ G
Sbjct: 55 VYTCGLNTKGQLGH---EREGNKPEQIG-------ALADQHIIHVACGESHSLALSDRGQ 104
Query: 83 LFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
LF+WGA GQLG TE+ P +++L + + +SCG HC A A DG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA-----DG--- 156
Query: 141 TSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
+ + WG+N G FP +P + + QV+ G H ALS G
Sbjct: 157 --QFFTWGKNSHGQLGLGKEFP----SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ WG N GQLG + R + K L +K+ +SCGE H+A ++++G
Sbjct: 211 VFGWGMNNAGQLGLSD-----EKDRESPCHVKLL----RTQKVVYISCGEEHTAVLTKSG 261
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYA 306
V+T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG H+ A S G +YA
Sbjct: 262 GVFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 307 WGGSQAGQLGLG 318
+G GQLG G
Sbjct: 319 FGCGARGQLGTG 330
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 161/341 (47%), Gaps = 32/341 (9%)
Query: 83 LFTWGANEFGQLGDGTE-EG-RKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG GQ G T +G P+ + VK ++CG + + + E DG +
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLE----DGEVY 56
Query: 141 TSRLWVWGQ---NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T L GQ + N P GA II V+CG H +ALS+ G L +WG G
Sbjct: 57 TCGLNTKGQLGHEREGNKPEQI-GALADQHII-HVACGESHSLALSDRGQLFSWGAGSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG T + + PR+I+ + + I QVSCG +H A++ +G+ +TWG S
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQ--------QTILQVSCGNWHCLALAADGQFFTWGKNSH 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG + + P+RV +L+GI + VA GG HS AL+ GA++ WG + AGQLGL
Sbjct: 167 GQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+ ES + + L+ V ++CG HT V + G + +G S GQ
Sbjct: 225 SDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Query: 378 ANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
++ P V +G EV ++A G H+ + L
Sbjct: 275 GHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 35/252 (13%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+ ++ WG GQ G E + +P+ + L ++CG+ H A+A+
Sbjct: 102 RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL-------NQQTILQVSCGNWHCLALAA 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG FTWG N GQLG G E + P++V+ L+ + ++ G + A++
Sbjct: 155 DGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-------- 206
Query: 139 ISTSRLWVWGQNQGSNF--------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
+ ++ WG N + +SCG H L++ G +
Sbjct: 207 -LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFT 265
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEV 249
+G GQLG + + RV++ ++TQ++CG H+ A V +G +
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGS---------EVTQIACGRQHTLAFVPSSGLI 316
Query: 250 YTWGLGSVGQLG 261
Y +G G+ GQLG
Sbjct: 317 YAFGCGARGQLG 328
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPE----LFGCPAGANSRWLDIACGHE 72
+ A + WG N GQ G G+E P Q P+ L G P +A G
Sbjct: 152 LAADGQFFTWGKNSHGQLGL-GKE----FPSQASPQRVRSLEGIPLA------QVAAGGA 200
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
H+ A++ G +F WG N GQLG E+ R+ P VK L+++ V ISCG TA + +
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260
Query: 133 --RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQ 189
G S +L N N PR + + Q++CG H +A + GL+
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGY 217
A+G GQLG G TC ++ P +KGY
Sbjct: 318 AFGCGARGQLGTGHTC-NVKCPSPVKGY 344
>gi|332233510|ref|XP_003265945.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Nomascus leucogenys]
Length = 1050
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 153/312 (49%), Gaps = 52/312 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G ER+ P+Q+ A A+ + +ACG H+ A++ G
Sbjct: 55 VYTCGLNTKGQLGH---EREGNKPEQIG-------ALADQHIIHVACGESHSLALSDRGQ 104
Query: 83 LFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
LF+WGA GQLG TE+ P +++L + + +SCG HC A A DG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA-----DG--- 156
Query: 141 TSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
+ + WG+N G FP +P + + QV+ G H ALS G
Sbjct: 157 --QFFTWGKNSHGQLGLGKEFP----SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ WG N GQLG + R + K L +K+ +SCGE H+A ++++G
Sbjct: 211 VFGWGMNNAGQLGLSD-----EKDRESPCHVKLL----RTQKVVYISCGEEHTAVLTKSG 261
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYA 306
V+T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG H+ A S G +YA
Sbjct: 262 GVFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 307 WGGSQAGQLGLG 318
+G GQLG G
Sbjct: 319 FGCGARGQLGTG 330
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 161/341 (47%), Gaps = 32/341 (9%)
Query: 83 LFTWGANEFGQLGDGTE-EG-RKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG GQ G T +G P+ + VK ++CG + + + E DG +
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLE----DGEVY 56
Query: 141 TSRLWVWGQ---NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T L GQ + N P GA II V+CG H +ALS+ G L +WG G
Sbjct: 57 TCGLNTKGQLGHEREGNKPEQI-GALADQHII-HVACGESHSLALSDRGQLFSWGAGSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG T + + PR+I+ + + I QVSCG +H A++ +G+ +TWG S
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQ--------QTILQVSCGNWHCLALAADGQFFTWGKNSH 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG + + P+RV +L+GI + VA GG HS AL+ GA++ WG + AGQLGL
Sbjct: 167 GQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+ ES + + L+ V ++CG HT V + G + +G S GQ
Sbjct: 225 SDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Query: 378 ANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
++ P V +G EV ++A G H+ + L
Sbjct: 275 GHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 35/252 (13%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+ ++ WG GQ G E + +P+ + L ++CG+ H A+A+
Sbjct: 102 RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL-------NQQTILQVSCGNWHCLALAA 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG FTWG N GQLG G E + P++V+ L+ + ++ G + A++
Sbjct: 155 DGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-------- 206
Query: 139 ISTSRLWVWGQNQGSNF--------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
+ ++ WG N + +SCG H L++ G +
Sbjct: 207 -LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFT 265
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEV 249
+G GQLG + + RV++ ++TQ++CG H+ A V +G +
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGS---------EVTQIACGRQHTLAFVPSSGLI 316
Query: 250 YTWGLGSVGQLG 261
Y +G G+ GQLG
Sbjct: 317 YAFGCGARGQLG 328
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPE----LFGCPAGANSRWLDIACGHE 72
+ A + WG N GQ G G+E P Q P+ L G P +A G
Sbjct: 152 LAADGQFFTWGKNSHGQLGL-GKE----FPSQASPQRVRSLEGIPLA------QVAAGGA 200
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
H+ A++ G +F WG N GQLG E+ R+ P VK L+++ V ISCG TA + +
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260
Query: 133 --RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQ 189
G S +L N N PR + + Q++CG H +A + GL+
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGY 217
A+G GQLG G TC ++ P +KGY
Sbjct: 318 AFGCGARGQLGTGHTC-NVKCPSPVKGY 344
>gi|312792299|ref|YP_004025222.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312179439|gb|ADQ39609.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 754
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 121/407 (29%), Positives = 188/407 (46%), Gaps = 73/407 (17%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N+ GQ G I +P ++ G + IA G+ H+ A+ DGT
Sbjct: 368 VWSWGNNYYGQLGNGNS-----IDSYVPVQVRGLKDV-----VAIATGNAHSLALKKDGT 417
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG NEFGQLG+GT + P +VK L+ V +I+ G+ + A + DGT+
Sbjct: 418 VWAWGNNEFGQLGNGTNKSSFVPVQVKGLKD--VVAIAAGSDHSLAF----KKDGTV--- 468
Query: 143 RLWVWGQNQGSNFPRLFWGA-------FTPNTI-----ICQVSCGSVHVVALSECGLLQA 190
W WG N+ F +L G+ P + + V+ GSVH +AL + G + A
Sbjct: 469 --WAWGNNE---FGQLGNGSGGYGQYYAVPVQVKGLKDVVAVAAGSVHSLALKKDGTIWA 523
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG N +G LG I + P +KG L+ + ++ G HS + ++G V+
Sbjct: 524 WGSNYHGLLGNDIERSFV--PVQVKG----------LKDVVAIAAGSNHSLVLKKDGTVW 571
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV---ACGGVHSCALTSKGALYAW 307
W G++ L + + V + G +KDV A G HS L G ++AW
Sbjct: 572 AW-----GEVWFDLLNENSRLVYSSVPVQIKG--LKDVVAIAAGEHHSLGLKKDGTVWAW 624
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G + GQLG P+ + +SL+P + + +A G H+L +DG +
Sbjct: 625 GDNFFGQLGNSPREK-YSLVPVQVKGL----------KDILAIATGEWHSLAIKKDGTVW 673
Query: 368 GWGYNSYGQAANE---KSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
WG NS GQ NE K Y++ P V + +V ++AG HS L
Sbjct: 674 AWGENSTGQLGNETSGKDKYSYVPVQVK-GIKDVLAISAGSYHSLAL 719
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 168/362 (46%), Gaps = 66/362 (18%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
IA G H+ A+ DGT++ WG N +GQLG+G E P +VK L+ V +I+ G + +
Sbjct: 252 IAAGRYHSLALKKDGTVWAWGNNYYGQLGNGKSEDSYDPVQVKNLKD--VVAIAAGENHS 309
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG--------------AFTPNTIICQV 172
A+ + DGTI W WG N+ WG F + +
Sbjct: 310 LAL----KKDGTI-----WAWGDNE--------WGQLGNSISEKLCVPVQFKSLKDVVAI 352
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
+ G H +AL + G + +WG N YGQLG G + + P ++G L+ +
Sbjct: 353 AAGCEHSLALKKDGTVWSWGNNYYGQLGNGNSIDSYV-PVQVRG----------LKDVVA 401
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
++ G HS A+ ++G V+ WG GQLG+ + +S +P +V L + +A G
Sbjct: 402 IATGNAHSLALKKDGTVWAWGNNEFGQLGNGTNKS---SFVPVQVKGLKDVVA--IAAGS 456
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTY--FRNIPILVV-PNGVQL 349
HS A G ++AWG ++ GQLG N S Y + +P+ V V
Sbjct: 457 DHSLAFKKDGTVWAWGNNEFGQLG------------NGSGGYGQYYAVPVQVKGLKDVVA 504
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
VA G H+L +DG I WG N +G N+ ++ P V + +V +AAG HS
Sbjct: 505 VAAGSVHSLALKKDGTIWAWGSNYHGLLGNDIER-SFVPVQVK-GLKDVVAIAAGSNHSL 562
Query: 410 VL 411
VL
Sbjct: 563 VL 564
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 118/435 (27%), Positives = 194/435 (44%), Gaps = 91/435 (20%)
Query: 23 IYVWGYNHSGQTGRK--------------------GRERQLRIPKQLPPELFGC------ 56
++ WG+NH GQ G + GR L + K +G
Sbjct: 67 VWAWGWNHWGQCGTEESSIIPVKVKGLKDVVAIAAGRYHSLTLKKDGTVWAWGSNKDGQL 126
Query: 57 ---PAGANS----------RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRK 103
AG S + IA G ++ + DGT++ WG NE Q+ DG+ +
Sbjct: 127 GNRDAGEYSIVPVQVKGLKDVVAIAAGDGYSLGLKKDGTVWCWGLNESIQVIDGSNKDFS 186
Query: 104 HPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGA- 162
P ++K L+ V +I+ G + A+ + DGT+ W+W + + + + +L GA
Sbjct: 187 VPFQIKGLKD--VVAIAAGKDYSLAL----KKDGTV-----WMW-EYKYNYYEQLRRGAD 234
Query: 163 -FTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVI 214
++P + + ++ G H +AL + G + AWG N YGQLG G E P +
Sbjct: 235 EYSPVPVQVEGLKDVVAIAAGRYHSLALKKDGTVWAWGNNYYGQLGNG-KSEDSYDPVQV 293
Query: 215 KGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLP 274
K L+ + ++ GE HS A+ ++G ++ WG GQLG+ +K +P
Sbjct: 294 K----------NLKDVVAIAAGENHSLALKKDGTIWAWGDNEWGQLGNS---ISEKLCVP 340
Query: 275 RRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTY 334
+ +L + +A G HS AL G +++WG + GQLG G N D+Y
Sbjct: 341 VQFKSLKDVVA--IAAGCEHSLALKKDGTVWSWGNNYYGQLGNG----------NSIDSY 388
Query: 335 FRNIPILVV-PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDW 393
+P+ V V +A G++H+L +DG + WG N +GQ N + ++ P V
Sbjct: 389 ---VPVQVRGLKDVVAIATGNAHSLALKKDGTVWAWGNNEFGQLGNGTNKSSFVPVQVK- 444
Query: 394 CVGEVRKLAAGGGHS 408
+ +V +AAG HS
Sbjct: 445 GLKDVVAIAAGSDHS 459
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 170/397 (42%), Gaps = 83/397 (20%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
+ IA G+ H+ A+ DGT++ WG N +GQ GTEE P KVK L+ V +I+ G +
Sbjct: 49 IQIAAGNYHSLALKGDGTVWAWGWNHWGQC--GTEESSIIPVKVKGLKD--VVAIAAGRY 104
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-------ICQVSCGSV 177
+ + + DGT+ W WG N+ G ++ + + ++ G
Sbjct: 105 HSLTL----KKDGTV-----WAWGSNKDGQLGNRDAGEYSIVPVQVKGLKDVVAIAAGDG 155
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKG--------------------- 216
+ + L + G + WG NE Q+ G + + P IKG
Sbjct: 156 YSLGLKKDGTVWCWGLNESIQVIDG-SNKDFSVPFQIKGLKDVVAIAAGKDYSLALKKDG 214
Query: 217 -----------YAKFLDEAPE----------LEKITQVSCGEYHSAAVSENGEVYTWGLG 255
Y + A E L+ + ++ G YHS A+ ++G V+ WG
Sbjct: 215 TVWMWEYKYNYYEQLRRGADEYSPVPVQVEGLKDVVAIAAGRYHSLALKKDGTVWAWGNN 274
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
GQLG+ + P +V L + +A G HS AL G ++AWG ++ GQL
Sbjct: 275 YYGQLGNG---KSEDSYDPVQVKNLKDVVA--IAAGENHSLALKKDGTIWAWGDNEWGQL 329
Query: 316 GLGPQTRSFSL-IPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
G + S L +P + F+++ +V +A G H+L +DG + WG N Y
Sbjct: 330 G---NSISEKLCVPVQ----FKSLKDVVA------IAAGCEHSLALKKDGTVWSWGNNYY 376
Query: 375 GQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
GQ N S ++ P V + +V +A G HS L
Sbjct: 377 GQLGNGNSIDSYVPVQVR-GLKDVVAIATGNAHSLAL 412
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 149/319 (46%), Gaps = 51/319 (15%)
Query: 23 IYVWGYNHSGQ--TGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
++ WG N GQ G G + +P Q+ L A +A G H+ A+ D
Sbjct: 468 VWAWGNNEFGQLGNGSGGYGQYYAVPVQVKG-LKDVVA--------VAAGSVHSLALKKD 518
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
GT++ WG+N G LG+ E P +VK L+ V +I+ G++ + + + DGT+
Sbjct: 519 GTIWAWGSNYHGLLGNDIERSFV-PVQVKGLKD--VVAIAAGSNHSLVL----KKDGTV- 570
Query: 141 TSRLWVWGQ------NQGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECGLLQ 189
W WG+ N+ S RL + + P I + ++ G H + L + G +
Sbjct: 571 ----WAWGEVWFDLLNENS---RLVYSS-VPVQIKGLKDVVAIAAGEHHSLGLKKDGTVW 622
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
AWG N +GQLG PR + Y+ + L+ I ++ GE+HS A+ ++G V
Sbjct: 623 AWGDNFFGQLGNS--------PR--EKYSLVPVQVKGLKDILAIATGEWHSLAIKKDGTV 672
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
+ WG S GQLG+ + +P +V + + ++ G HS AL G ++ WG
Sbjct: 673 WAWGENSTGQLGNETSGKDKYSYVPVQVKGIKDVLA--ISAGSYHSLALKKDGTVWGWGA 730
Query: 310 SQAGQLGLGPQTRSFSLIP 328
+ GQLG G +S +P
Sbjct: 731 NARGQLGNGG-AGVYSTVP 748
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 124/283 (43%), Gaps = 58/283 (20%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I Q++ G+ H +AL G + AWG+N +GQ G T E P +KG L+
Sbjct: 48 IIQIAAGNYHSLALKGDGTVWAWGWNHWGQCG---TEESSIIPVKVKG----------LK 94
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
+ ++ G YHS + ++G V+ WG GQLG+ +G+ ++P +V L + +
Sbjct: 95 DVVAIAAGRYHSLTLKKDGTVWAWGSNKDGQLGNR--DAGEYSIVPVQVKGLKDVVA--I 150
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQT--------------------RSFSLIP 328
A G +S L G ++ WG +++ Q+ G + +SL
Sbjct: 151 AAGDGYSLGLKKDGTVWCWGLNESIQVIDGSNKDFSVPFQIKGLKDVVAIAAGKDYSLAL 210
Query: 329 NESDT---------YFRNI--------PILVVPNGVQ---LVACGHSHTLVYMRDGRIHG 368
+ T Y+ + P+ V G++ +A G H+L +DG +
Sbjct: 211 KKDGTVWMWEYKYNYYEQLRRGADEYSPVPVQVEGLKDVVAIAAGRYHSLALKKDGTVWA 270
Query: 369 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
WG N YGQ N KS ++ P V + +V +AAG HS L
Sbjct: 271 WGNNYYGQLGNGKSEDSYDPVQVK-NLKDVVAIAAGENHSLAL 312
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 128/287 (44%), Gaps = 44/287 (15%)
Query: 3 INEIIGETARPVDNIPAKS--AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA 60
+ +++ A V ++ K I+ WG N+ G G ER +P ++ G
Sbjct: 499 LKDVVAVAAGSVHSLALKKDGTIWAWGSNYHGLLGND-IERSF-----VPVQVKGLKDV- 551
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKH-PEKVKQLQSEFVKSI 119
+ IA G H+ + DGT++ WG F L + + P ++K L+ V +I
Sbjct: 552 ----VAIAAGSNHSLVLKKDGTVWAWGEVWFDLLNENSRLVYSSVPVQIKGLKD--VVAI 605
Query: 120 SCGAHCTAAIAEPRENDGTISTSRLWVWGQN---QGSNFPRLFWGAFTPNTI-----ICQ 171
+ G H + + + DGT+ W WG N Q N PR + + P + I
Sbjct: 606 AAGEHHSLGL----KKDGTV-----WAWGDNFFGQLGNSPREKY-SLVPVQVKGLKDILA 655
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
++ G H +A+ + G + AWG N GQLG + + Y+ + ++ +
Sbjct: 656 IATGEWHSLAIKKDGTVWAWGENSTGQLGNETSGK--------DKYSYVPVQVKGIKDVL 707
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
+S G YHS A+ ++G V+ WG + GQLG+ +G +P +V+
Sbjct: 708 AISAGSYHSLALKKDGTVWGWGANARGQLGNGG--AGVYSTVPVQVI 752
>gi|7657152|ref|NP_055421.1| probable E3 ubiquitin-protein ligase HERC3 isoform 1 [Homo sapiens]
gi|397480079|ref|XP_003811323.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Pan paniscus]
gi|426344933|ref|XP_004039158.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Gorilla gorilla gorilla]
gi|2495699|sp|Q15034.1|HERC3_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC3; AltName:
Full=HECT domain and RCC1-like domain-containing protein
3
gi|119626429|gb|EAX06024.1| hect domain and RLD 3 [Homo sapiens]
gi|158261003|dbj|BAF82679.1| unnamed protein product [Homo sapiens]
gi|168274306|dbj|BAG09573.1| E3 ubiquitin-protein ligase HERC3 [synthetic construct]
gi|187252515|gb|AAI66672.1| Hect domain and RLD 3 [synthetic construct]
gi|410211922|gb|JAA03180.1| hect domain and RLD 3 [Pan troglodytes]
gi|410261200|gb|JAA18566.1| hect domain and RLD 3 [Pan troglodytes]
gi|410295580|gb|JAA26390.1| hect domain and RLD 3 [Pan troglodytes]
gi|410339519|gb|JAA38706.1| hect domain and RLD 3 [Pan troglodytes]
Length = 1050
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 153/312 (49%), Gaps = 52/312 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G ER+ P+Q+ A A+ + +ACG H+ A++ G
Sbjct: 55 VYTCGLNTKGQLGH---EREGNKPEQIG-------ALADQHIIHVACGESHSLALSDRGQ 104
Query: 83 LFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
LF+WGA GQLG TE+ P +++L + + +SCG HC A A DG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA-----DG--- 156
Query: 141 TSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
+ + WG+N G FP +P + + QV+ G H ALS G
Sbjct: 157 --QFFTWGKNSHGQLGLGKEFP----SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ WG N GQLG + R + K L +K+ +SCGE H+A ++++G
Sbjct: 211 VFGWGMNNAGQLGLSD-----EKDRESPCHVKLL----RTQKVVYISCGEEHTAVLTKSG 261
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYA 306
V+T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG H+ A S G +YA
Sbjct: 262 GVFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 307 WGGSQAGQLGLG 318
+G GQLG G
Sbjct: 319 FGCGARGQLGTG 330
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 161/341 (47%), Gaps = 32/341 (9%)
Query: 83 LFTWGANEFGQLGDGTE-EG-RKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG GQ G T +G P+ + VK ++CG + + + E DG +
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLE----DGEVY 56
Query: 141 TSRLWVWGQ---NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T L GQ + N P GA II V+CG H +ALS+ G L +WG G
Sbjct: 57 TCGLNTKGQLGHEREGNKPEQI-GALADQHII-HVACGESHSLALSDRGQLFSWGAGSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG T + + PR+I+ + + I QVSCG +H A++ +G+ +TWG S
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQ--------QTILQVSCGNWHCLALAADGQFFTWGKNSH 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG + + P+RV +L+GI + VA GG HS AL+ GA++ WG + AGQLGL
Sbjct: 167 GQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+ ES + + L+ V ++CG HT V + G + +G S GQ
Sbjct: 225 SDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Query: 378 ANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
++ P V +G EV ++A G H+ + L
Sbjct: 275 GHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 35/252 (13%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+ ++ WG GQ G E + +P+ + L ++CG+ H A+A+
Sbjct: 102 RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL-------NQQTILQVSCGNWHCLALAA 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG FTWG N GQLG G E + P++V+ L+ + ++ G + A++
Sbjct: 155 DGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-------- 206
Query: 139 ISTSRLWVWGQNQGSNF--------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
+ ++ WG N + +SCG H L++ G +
Sbjct: 207 -LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFT 265
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEV 249
+G GQLG + + RV++ ++TQ++CG H+ A V +G +
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGS---------EVTQIACGRQHTLAFVPSSGLI 316
Query: 250 YTWGLGSVGQLG 261
Y +G G+ GQLG
Sbjct: 317 YAFGCGARGQLG 328
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPE----LFGCPAGANSRWLDIACGHE 72
+ A + WG N GQ G G+E P Q P+ L G P +A G
Sbjct: 152 LAADGQFFTWGKNSHGQLGL-GKE----FPSQASPQRVRSLEGIPLA------QVAAGGA 200
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
H+ A++ G +F WG N GQLG E+ R+ P VK L+++ V ISCG TA + +
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260
Query: 133 --RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQ 189
G S +L N N PR + + Q++CG H +A + GL+
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGY 217
A+G GQLG G TC ++ P +KGY
Sbjct: 318 AFGCGARGQLGTGHTC-NVKCPSPVKGY 344
>gi|627469|pir||B38919 hypothetical protein 2 - human (fragment)
gi|40788957|dbj|BAA04945.2| KIAA0032 [Homo sapiens]
Length = 1054
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 153/312 (49%), Gaps = 52/312 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G ER+ P+Q+ A A+ + +ACG H+ A++ G
Sbjct: 59 VYTCGLNTKGQLGH---EREGNKPEQIG-------ALADQHIIHVACGESHSLALSDRGQ 108
Query: 83 LFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
LF+WGA GQLG TE+ P +++L + + +SCG HC A A DG
Sbjct: 109 LFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA-----DG--- 160
Query: 141 TSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
+ + WG+N G FP +P + + QV+ G H ALS G
Sbjct: 161 --QFFTWGKNSHGQLGLGKEFP----SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 214
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ WG N GQLG + R + K L +K+ +SCGE H+A ++++G
Sbjct: 215 VFGWGMNNAGQLGLSD-----EKDRESPCHVKLL----RTQKVVYISCGEEHTAVLTKSG 265
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYA 306
V+T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG H+ A S G +YA
Sbjct: 266 GVFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 322
Query: 307 WGGSQAGQLGLG 318
+G GQLG G
Sbjct: 323 FGCGARGQLGTG 334
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/342 (31%), Positives = 160/342 (46%), Gaps = 32/342 (9%)
Query: 82 TLFTWGANEFGQLGDGTEEG--RKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
T+ WG GQ G T P+ + VK ++CG + + + E DG +
Sbjct: 4 TMLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLE----DGEV 59
Query: 140 STSRLWVWGQ---NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
T L GQ + N P GA II V+CG H +ALS+ G L +WG
Sbjct: 60 YTCGLNTKGQLGHEREGNKPEQI-GALADQHII-HVACGESHSLALSDRGQLFSWGAGSD 117
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG T + + PR+I+ + + I QVSCG +H A++ +G+ +TWG S
Sbjct: 118 GQLGLMTTEDSVAVPRLIQKLNQ--------QTILQVSCGNWHCLALAADGQFFTWGKNS 169
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
GQLG + + P+RV +L+GI + VA GG HS AL+ GA++ WG + AGQLG
Sbjct: 170 HGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 227
Query: 317 LGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
L + ES + + L+ V ++CG HT V + G + +G S GQ
Sbjct: 228 LSDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 277
Query: 377 AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
++ P V +G EV ++A G H+ + L
Sbjct: 278 LGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 319
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 35/252 (13%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+ ++ WG GQ G E + +P+ + L ++CG+ H A+A+
Sbjct: 106 RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL-------NQQTILQVSCGNWHCLALAA 158
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG FTWG N GQLG G E + P++V+ L+ + ++ G + A++
Sbjct: 159 DGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-------- 210
Query: 139 ISTSRLWVWGQNQGSNF--------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
+ ++ WG N + +SCG H L++ G +
Sbjct: 211 -LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFT 269
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEV 249
+G GQLG + + RV++ ++TQ++CG H+ A V +G +
Sbjct: 270 FGAGSCGQLGHDSMNDEVNPRRVLELMG---------SEVTQIACGRQHTLAFVPSSGLI 320
Query: 250 YTWGLGSVGQLG 261
Y +G G+ GQLG
Sbjct: 321 YAFGCGARGQLG 332
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPE----LFGCPAGANSRWLDIACGHE 72
+ A + WG N GQ G G+E P Q P+ L G P +A G
Sbjct: 156 LAADGQFFTWGKNSHGQLGL-GKE----FPSQASPQRVRSLEGIPLA------QVAAGGA 204
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
H+ A++ G +F WG N GQLG E+ R+ P VK L+++ V ISCG TA + +
Sbjct: 205 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 264
Query: 133 --RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQ 189
G S +L N N PR + + Q++CG H +A + GL+
Sbjct: 265 GGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 321
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGY 217
A+G GQLG G TC ++ P +KGY
Sbjct: 322 AFGCGARGQLGTGHTC-NVKCPSPVKGY 348
>gi|417405695|gb|JAA49551.1| Putative e3 ubiquitin-protein ligase herc3 [Desmodus rotundus]
Length = 1050
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 154/312 (49%), Gaps = 52/312 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G ER+ P+Q+ A A+ + +ACG H+ A++ G
Sbjct: 55 VYTCGLNTKGQLGH---EREGNKPEQIG-------ALADQHIVHVACGESHSLALSDRGQ 104
Query: 83 LFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
LF+WGA GQLG TE+ P +++L + + +SCG HC A A DG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA-----DG--- 156
Query: 141 TSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
+ + WG+N G FP +P + + QV+ G H ALS G
Sbjct: 157 --QFFTWGKNSHGQLGLGKEFP----SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ WG N GQLG E + P + K L +K+ +SCGE H+A ++++G
Sbjct: 211 VFGWGMNNAGQLGLSDE-EDRESP----CHVKLL----RTQKVVYISCGEEHTAVLTKSG 261
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYA 306
V+T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG H+ A S G +YA
Sbjct: 262 GVFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 307 WGGSQAGQLGLG 318
+G GQLG G
Sbjct: 319 FGCGARGQLGTG 330
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 161/341 (47%), Gaps = 32/341 (9%)
Query: 83 LFTWGANEFGQLGDGTE-EG-RKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG GQ G T +G P+ + VK ++CG + + + E DG +
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLE----DGEVY 56
Query: 141 TSRLWVWGQ---NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T L GQ + N P GA I+ V+CG H +ALS+ G L +WG G
Sbjct: 57 TCGLNTKGQLGHEREGNKPEQI-GALADQHIV-HVACGESHSLALSDRGQLFSWGAGSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG T + + PR+I+ + + I QVSCG +H A++ +G+ +TWG S
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQ--------QTILQVSCGNWHCLALAADGQFFTWGKNSH 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG + + P+RV +L+GI + VA GG HS AL+ GA++ WG + AGQLGL
Sbjct: 167 GQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+ ES + + L+ V ++CG HT V + G + +G S GQ
Sbjct: 225 SDEED------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Query: 378 ANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
++ P V +G EV ++A G H+ + L
Sbjct: 275 GHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPE----LFGCPAGANSRWLDIACGHE 72
+ A + WG N GQ G G+E P Q P+ L G P +A G
Sbjct: 152 LAADGQFFTWGKNSHGQLGL-GKE----FPSQASPQRVRSLEGIPLA------QVAAGGA 200
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
H+ A++ G +F WG N GQLG EE R+ P VK L+++ V ISCG TA + +
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260
Query: 133 --RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQ 189
G S +L N N PR + + Q++CG H +A + GL+
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGY 217
A+G GQLG G TC ++ P +KGY
Sbjct: 318 AFGCGARGQLGTGHTC-NVKCPSPVKGY 344
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 35/252 (13%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+ ++ WG GQ G E + +P+ + L ++CG+ H A+A+
Sbjct: 102 RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ-------KLNQQTILQVSCGNWHCLALAA 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG FTWG N GQLG G E + P++V+ L+ + ++ G + A++
Sbjct: 155 DGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-------- 206
Query: 139 ISTSRLWVWGQNQGSNF--------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
+ ++ WG N + +SCG H L++ G +
Sbjct: 207 -LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFT 265
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEV 249
+G GQLG + + RV++ ++TQ++CG H+ A V +G +
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGS---------EVTQIACGRQHTLAFVPSSGLI 316
Query: 250 YTWGLGSVGQLG 261
Y +G G+ GQLG
Sbjct: 317 YAFGCGARGQLG 328
>gi|403263478|ref|XP_003924058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Saimiri
boliviensis boliviensis]
Length = 1050
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 153/312 (49%), Gaps = 52/312 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G ER+ P+Q+ A A+ + +ACG H+ A++ G
Sbjct: 55 VYTCGLNTKGQLGH---EREGNKPEQIG-------ALADQHIIHVACGESHSLALSDRGQ 104
Query: 83 LFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
LF+WGA GQLG TE+ P +++L + + +SCG HC A A DG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA-----DG--- 156
Query: 141 TSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
+ + WG+N G FP +P + + QV+ G H ALS G
Sbjct: 157 --QFFTWGKNSHGQLGLGKEFP----SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ WG N GQLG + R + K L +K+ +SCGE H+A ++++G
Sbjct: 211 VFGWGMNNAGQLGLSD-----EKDRESPCHVKLL----RTQKVVYISCGEEHTAVLTKSG 261
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYA 306
V+T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG H+ A S G +YA
Sbjct: 262 GVFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 307 WGGSQAGQLGLG 318
+G GQLG G
Sbjct: 319 FGCGARGQLGTG 330
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 160/341 (46%), Gaps = 32/341 (9%)
Query: 83 LFTWGANEFGQLGDGT--EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG GQ G T + P+ + VK ++CG + + + E DG +
Sbjct: 1 MLCWGYWSLGQPGISTSLQGIVAEPQVCGFISDRTVKEVACGGNHSVFLLE----DGEVY 56
Query: 141 TSRLWVWGQ---NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T L GQ + N P GA II V+CG H +ALS+ G L +WG G
Sbjct: 57 TCGLNTKGQLGHEREGNKPEQI-GALADQHII-HVACGESHSLALSDRGQLFSWGAGSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG T + + PR+I+ + + I QVSCG +H A++ +G+ +TWG S
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQ--------QTILQVSCGNWHCLALAADGQFFTWGKNSH 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG + + P+RV +L+GI + VA GG HS AL+ GA++ WG + AGQLGL
Sbjct: 167 GQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+ ES + + L+ V ++CG HT V + G + +G S GQ
Sbjct: 225 SDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Query: 378 ANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
++ P V +G EV ++A G H+ + L
Sbjct: 275 GHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 35/252 (13%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+ ++ WG GQ G E + +P+ + L ++CG+ H A+A+
Sbjct: 102 RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL-------NQQTILQVSCGNWHCLALAA 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG FTWG N GQLG G E + P++V+ L+ + ++ G + A++
Sbjct: 155 DGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-------- 206
Query: 139 ISTSRLWVWGQNQGSNF--------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
+ ++ WG N + +SCG H L++ G +
Sbjct: 207 -LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFT 265
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEV 249
+G GQLG + + RV++ ++TQ++CG H+ A V +G +
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMG---------SEVTQIACGRQHTLAFVPSSGLI 316
Query: 250 YTWGLGSVGQLG 261
Y +G G+ GQLG
Sbjct: 317 YAFGCGARGQLG 328
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPE----LFGCPAGANSRWLDIACGHE 72
+ A + WG N GQ G G+E P Q P+ L G P +A G
Sbjct: 152 LAADGQFFTWGKNSHGQLGL-GKE----FPSQASPQRVRSLEGIPLA------QVAAGGA 200
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
H+ A++ G +F WG N GQLG E+ R+ P VK L+++ V ISCG TA + +
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260
Query: 133 --RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQ 189
G S +L N N PR + + Q++CG H +A + GL+
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGY 217
A+G GQLG G TC ++ P +KGY
Sbjct: 318 AFGCGARGQLGTGHTC-NVKCPSPVKGY 344
>gi|170060307|ref|XP_001865743.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167878807|gb|EDS42190.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 1063
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 161/353 (45%), Gaps = 52/353 (14%)
Query: 22 AIYVWGYNHSGQTGRKG-RERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
A+Y WG G+ G G E Q+ P+++ AN + ACG HT + D
Sbjct: 2 ALYCWGSTVHGELGLGGIEEEQVMTPREM-----DWSQAANVQ--QAACGGSHTLLLTKD 54
Query: 81 GTLFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
G L+T G N+ GQLG D K P+ + L++ V +SCG + A+
Sbjct: 55 GKLYTCGNNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALT--------- 105
Query: 140 STSRLWVWGQNQGSNF-----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ +L+ WG N PR+ T + Q+SCG H +AL+ G L
Sbjct: 106 NWGQLFSWGSNATGQLGHDLDMVSYPAPRMIKSIATKTVV--QISCGHSHCLALTNSGEL 163
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
AWG NEYGQLG G T + + ++K A I ++CG HS AVS++G
Sbjct: 164 FAWGANEYGQLGLGTTGKKVPTATLVKSLAGI--------PIAFIACGGNHSFAVSKSGA 215
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
++ WG + GQLG L D P ++ L + ++ ++CG S LT +G ++ G
Sbjct: 216 IFGWGKNTFGQLG---LNDLDSRCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCG 272
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
GQLG G T ++P + ++ + + +ACG HTL ++
Sbjct: 273 LGTFGQLGHG--THGNEILP--------RMVFELMGSKITQIACGRKHTLAFV 315
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 130/295 (44%), Gaps = 41/295 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G +P + P + A N ++CG H+ A+ + G
Sbjct: 57 LYTCGNNDHGQLGHDTN----NLPNKRPQFI---SALENYIVTQVSCGLSHSLALTNWGQ 109
Query: 83 LFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGTIS 140
LF+WG+N GQLG D P +K + ++ V ISCG +HC A +
Sbjct: 110 LFSWGSNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLA----------LTN 159
Query: 141 TSRLWVWGQNQ---------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
+ L+ WG N+ G P I ++CG H A+S+ G + W
Sbjct: 160 SGELFAWGANEYGQLGLGTTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGW 219
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G N +GQLG + P +K + +SCG+ S +++ G V+T
Sbjct: 220 GKNTFGQLGLN-DLDSRCYPTQLKTLRSL--------GVRYISCGDDFSVFLTQEGGVFT 270
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALY 305
GLG+ GQLGH + E+LPR V L G I +ACG H+ A S+G +Y
Sbjct: 271 CGLGTFGQLGHG---THGNEILPRMVFELMGSKITQIACGRKHTLAFVPSRGKVY 322
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 48/112 (42%), Gaps = 8/112 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
AI+ WG N GQ G + + P QL R+ I+CG + + + +G
Sbjct: 215 AIFGWGKNTFGQLGLNDLDSRCY-PTQLK-----TLRSLGVRY--ISCGDDFSVFLTQEG 266
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
+FT G FGQLG GT P V +L + I+CG T A R
Sbjct: 267 GVFTCGLGTFGQLGHGTHGNEILPRMVFELMGSKITQIACGRKHTLAFVPSR 318
>gi|327273159|ref|XP_003221348.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Anolis
carolinensis]
Length = 1109
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 150/312 (48%), Gaps = 52/312 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G E++ P+Q+ A A+ + +ACG H+ A++ G
Sbjct: 114 VYTCGVNTKGQLGH---EKEGSKPEQIG-------ALADQHIIHVACGESHSLALSDQGR 163
Query: 83 LFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
LF+WGA GQLG TE+ P +K+L E + +SCG HC A A DG
Sbjct: 164 LFSWGAGSDGQLGLTTTEDSVAVPRLIKKLNQEMILQVSCGNWHCLALAA-----DG--- 215
Query: 141 TSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
+ + WGQN G FP +P + + QV+ G H ALS G
Sbjct: 216 --QFFAWGQNSHGQLGLGKEFP----SQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGA 269
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ WG N GQLG + R + K L +K+ +SCG H+A +++ G
Sbjct: 270 VFGWGKNTSGQLGLSD-----EQDRESPCHVKLL----RTQKVVYISCGSDHTAVLTKTG 320
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYA 306
V+T+G GS GQLGH S + E+ PRRV+ L G + +ACG H+ A S G +YA
Sbjct: 321 GVFTFGAGSCGQLGHDSF---NDEVNPRRVLELMGSEVSQIACGRQHTLAFVPSSGLIYA 377
Query: 307 WGGSQAGQLGLG 318
+G GQLG G
Sbjct: 378 FGCGIKGQLGSG 389
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 106/342 (30%), Positives = 160/342 (46%), Gaps = 34/342 (9%)
Query: 83 LFTWGANEFGQLGDGT--EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FG G + + P + VK ++CG + + + E DG +
Sbjct: 60 MLCWGYWSFGYPGTSSTVQPIILEPRTSGFIHERSVKEVACGGNHSIFLLE----DGEVY 115
Query: 141 TSRLWVWGQ----NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
T + GQ +GS ++ GA II V+CG H +ALS+ G L +WG
Sbjct: 116 TCGVNTKGQLGHEKEGSKPEQI--GALADQHII-HVACGESHSLALSDQGRLFSWGAGSD 172
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG T + + PR+IK + E I QVSCG +H A++ +G+ + WG S
Sbjct: 173 GQLGLTTTEDSVAVPRLIKKLNQ--------EMILQVSCGNWHCLALAADGQFFAWGQNS 224
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
GQLG + + P+RV +LDGI + VA GG HS AL+ GA++ WG + +GQLG
Sbjct: 225 HGQLGLG--KEFPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNTSGQLG 282
Query: 317 LGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
L + ES + + L+ V ++CG HT V + G + +G S GQ
Sbjct: 283 LSDEQD------RESPCHVK----LLRTQKVVYISCGSDHTAVLTKTGGVFTFGAGSCGQ 332
Query: 377 AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
++ P V +G EV ++A G H+ + L
Sbjct: 333 LGHDSFNDEVNPRRVLELMGSEVSQIACGRQHTLAFVPSSGL 374
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 172/390 (44%), Gaps = 52/390 (13%)
Query: 14 VDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEH 73
+D+ + WGY G G + P L P G + + ++ACG H
Sbjct: 51 LDDFLKGKKMLCWGYWSFGYPGTSSTVQ----PIILEPRTSGFIHERSVK--EVACGGNH 104
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
+ + DG ++T G N GQLG +EG K PE++ L + + ++CG + A+++
Sbjct: 105 SIFLLEDGEVYTCGVNTKGQLGH-EKEGSK-PEQIGALADQHIIHVACGESHSLALSD-- 160
Query: 134 ENDGTISTSRLWVWGQNQGSNF-----------PRLFWGAFTPNTIICQVSCGSVHVVAL 182
RL+ WG PRL +I QVSCG+ H +AL
Sbjct: 161 -------QGRLFSWGAGSDGQLGLTTTEDSVAVPRLIKK--LNQEMILQVSCGNWHCLAL 211
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
+ G AWG N +GQLG G P+ +K LD P + QV+ G HS A
Sbjct: 212 AADGQFFAWGQNSHGQLGLGKEFPSQASPQRVKS----LDGIP----LAQVAAGGAHSFA 263
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
+S +G V+ WG + GQLG Q D+E P V L + ++CG H+ LT G
Sbjct: 264 LSLSGAVFGWGKNTSGQLGLSDEQ--DRE-SPCHVKLLRTQKVVYISCGSDHTAVLTKTG 320
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM- 361
++ +G GQLG SF N+ R + ++ + V +ACG HTL ++
Sbjct: 321 GVFTFGAGSCGQLG----HDSF----NDEVNPRRVLELM--GSEVSQIACGRQHTLAFVP 370
Query: 362 RDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
G I+ +G GQ + + PSPV
Sbjct: 371 SSGLIYAFGCGIKGQLGSGHTCNLKCPSPV 400
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 130/306 (42%), Gaps = 57/306 (18%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIP---KQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
++ WG GQ G E + +P K+L E+ L ++CG+ H A+A+
Sbjct: 164 LFSWGAGSDGQLGLTTTEDSVAVPRLIKKLNQEMI----------LQVSCGNWHCLALAA 213
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG F WG N GQLG G E + P++VK L + ++ G + A++
Sbjct: 214 DGQFFAWGQNSHGQLGLGKEFPSQASPQRVKSLDGIPLAQVAAGGAHSFALS-------- 265
Query: 139 ISTSRLWVWGQN----------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ ++ WG+N Q P T + +SCGS H L++ G +
Sbjct: 266 -LSGAVFGWGKNTSGQLGLSDEQDRESPCHVKLLRTQKVVY--ISCGSDHTAVLTKTGGV 322
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENG 247
+G GQLG + + RV++ +++Q++CG H+ A V +G
Sbjct: 323 FTFGAGSCGQLGHDSFNDEVNPRRVLELMG---------SEVSQIACGRQHTLAFVPSSG 373
Query: 248 EVYTWGLGSVGQLGH---CSLQ---------SGDKELLPRRVVALDGIFIKDVACGGVHS 295
+Y +G G GQLG C+L+ + E + RR A +K + GG +
Sbjct: 374 LIYAFGCGIKGQLGSGHTCNLKCPSPVKGHWAAHNEPVSRRADACKHYVVKHIFSGGDQT 433
Query: 296 CALTSK 301
L S+
Sbjct: 434 FVLCSE 439
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 95/207 (45%), Gaps = 20/207 (9%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A + WG N GQ G G+E + Q L G P +A G H+ A
Sbjct: 211 LAADGQFFAWGQNSHGQLGL-GKEFPSQASPQRVKSLDGIPLA------QVAAGGAHSFA 263
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
++ G +F WG N GQLG E+ R+ P VK L+++ V ISCG+ TA + +
Sbjct: 264 LSLSGAVFGWGKNTSGQLGLSDEQDRESPCHVKLLRTQKVVYISCGSDHTAVLTK----T 319
Query: 137 GTISTSRLWVWGQNQGSNF-----PRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQA 190
G + T GQ +F PR + + Q++CG H +A GL+ A
Sbjct: 320 GGVFTFGAGSCGQLGHDSFNDEVNPRRVLELM--GSEVSQIACGRQHTLAFVPSSGLIYA 377
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGY 217
+G GQLG G TC L+ P +KG+
Sbjct: 378 FGCGIKGQLGSGHTC-NLKCPSPVKGH 403
>gi|170062906|ref|XP_001866871.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167880719|gb|EDS44102.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 679
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 161/353 (45%), Gaps = 52/353 (14%)
Query: 22 AIYVWGYNHSGQTGRKG-RERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
A+Y WG G+ G G E Q+ P+++ AN + ACG HT + D
Sbjct: 2 ALYCWGSTVHGELGLGGIEEEQVMTPREM-----DWSQAANVQ--QAACGGSHTLLLTKD 54
Query: 81 GTLFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
G L+T G N+ GQLG D K P+ + L++ V +SCG + A+
Sbjct: 55 GKLYTCGNNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALT--------- 105
Query: 140 STSRLWVWGQNQGSNF-----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ +L+ WG N PR+ T + Q+SCG H +AL+ G L
Sbjct: 106 NWGQLFSWGSNATGQLGHDLDMVSYPAPRMIKSIATKTVV--QISCGHSHCLALTNSGEL 163
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
AWG NEYGQLG G T + + ++K A I ++CG HS AVS++G
Sbjct: 164 FAWGANEYGQLGLGTTGKKVPTATLVKSLAGI--------PIAFIACGGNHSFAVSKSGA 215
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
++ WG + GQLG L D P ++ L + ++ ++CG S LT +G ++ G
Sbjct: 216 IFGWGKNTFGQLG---LNDLDSRCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCG 272
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
GQLG G T ++P + ++ + + +ACG HTL ++
Sbjct: 273 LGTFGQLGHG--THGNEILP--------RMVFELMGSKITQIACGRKHTLAFV 315
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 130/295 (44%), Gaps = 41/295 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G +P + P + A N ++CG H+ A+ + G
Sbjct: 57 LYTCGNNDHGQLGHDTN----NLPNKRPQFI---SALENYIVTQVSCGLSHSLALTNWGQ 109
Query: 83 LFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGTIS 140
LF+WG+N GQLG D P +K + ++ V ISCG +HC A +
Sbjct: 110 LFSWGSNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLA----------LTN 159
Query: 141 TSRLWVWGQNQ---------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
+ L+ WG N+ G P I ++CG H A+S+ G + W
Sbjct: 160 SGELFAWGANEYGQLGLGTTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGW 219
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G N +GQLG + P +K + +SCG+ S +++ G V+T
Sbjct: 220 GKNTFGQLGLN-DLDSRCYPTQLKTLRSL--------GVRYISCGDDFSVFLTQEGGVFT 270
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALY 305
GLG+ GQLGH + E+LPR V L G I +ACG H+ A S+G +Y
Sbjct: 271 CGLGTFGQLGH---GTHGNEILPRMVFELMGSKITQIACGRKHTLAFVPSRGKVY 322
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 49/117 (41%), Gaps = 8/117 (6%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ AI+ WG N GQ G + + P QL R+ I+CG + +
Sbjct: 210 VSKSGAIFGWGKNTFGQLGLNDLDSRCY-PTQLK-----TLRSLGVRY--ISCGDDFSVF 261
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
+ +G +FT G FGQLG GT P V +L + I+CG T A R
Sbjct: 262 LTQEGGVFTCGLGTFGQLGHGTHGNEILPRMVFELMGSKITQIACGRKHTLAFVPSR 318
>gi|218781264|ref|YP_002432582.1| chromosome condensation regulator RCC1 [Desulfatibacillum
alkenivorans AK-01]
gi|218762648|gb|ACL05114.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
alkenivorans AK-01]
Length = 1525
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 115/380 (30%), Positives = 163/380 (42%), Gaps = 53/380 (13%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ ++VWG N Q G G + P+Q P S + +A G + A
Sbjct: 82 LKGDGTVWVWGRNDYNQLGL-GDDINRLAPEQAP---------VVSNIVSVAAGRLFSLA 131
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ASDG+L+ WG N +GQLG G + R P K L V +I+ G + A + E
Sbjct: 132 LASDGSLWAWGGNYYGQLGMGDNDNRLTPSKTPGLSD--VAAIAGGDYHALAATQSGE-- 187
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECGLLQAW 191
+W G+N A P + + V+ G +AL G + AW
Sbjct: 188 -------VWAMGRNDHGQLGFTGDHADAPVQVAGLSNVKSVAAGEFFSLALKNDGTVWAW 240
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G NE QLG GI E + P I L IT ++ G H+ A++E+G V+
Sbjct: 241 GNNESAQLGTGIAGEAVATPAPIA----------VLSNITAIAAGRRHAMALAEDGSVWA 290
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG GQLG ++ P RV +L + +A G HS ALTS G L+AWG +
Sbjct: 291 WGANGSGQLGFGDFET---PKAPGRVSSL--ADVTAIASGWFHSLALTSDGVLWAWGNNG 345
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGY 371
G+LG S +P + + + N V A G H+L DG + WG
Sbjct: 346 DGRLGT--DATSDQSLPAQ---------VSSISNAVSF-AGGQRHSLAIAADGSVWSWGG 393
Query: 372 NSYGQAANEKSTYAWYPSPV 391
N+YGQ E T A +PV
Sbjct: 394 NAYGQLGVESLTPASVLTPV 413
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 154/321 (47%), Gaps = 49/321 (15%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLG---DGTEEGRKHPEKVKQLQSEFVKSISCGA 123
IA G H A+A DG++++WG N GQLG GT + P+K+ + + V +I+CG
Sbjct: 1038 IAAGDNHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAISN--VAAIACGG 1095
Query: 124 HCTAAIAEPRENDGTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSV 177
+ A+A DG+ LW WG N G N+ + + + ++ G
Sbjct: 1096 SHSLAVAR----DGS-----LWSWGYNYYGQLGLGDNYSKTTPQKVNAISNVAAIAAGEY 1146
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
+ +AL+ G + +WG N GQLG G E P+ ++ L + ++ GE
Sbjct: 1147 YSLALTRDGSVWSWGDNSDGQLGLGDN-EDRNTPQKVE----------VLSNVAAIAAGE 1195
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
HS A++ +G V++WG S GQLG L D P+ V + I K +A G HS A
Sbjct: 1196 DHSLALTRDGSVWSWGRNSRGQLG---LDDNDDRNTPQPVTTISNI--KAIAAGNSHSFA 1250
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIP--ILVVPNGVQLVACGHS 355
++ +G +AWG + GQLG+G + NE N P + V+ N V L + G+
Sbjct: 1251 ISEEGLAWAWGYNYDGQLGIGTSGS----LANE------NTPQKVKVISNVVGL-SGGNY 1299
Query: 356 HTLVYMRDGRIHGWGYNSYGQ 376
H+L DG + WG N GQ
Sbjct: 1300 HSLALTEDGALWAWGDNDDGQ 1320
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 142/308 (46%), Gaps = 51/308 (16%)
Query: 22 AIYVWGYNHSGQTG--RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+++ WGYN GQ G G P+++ A S IACG H+ AVA
Sbjct: 1053 SVWSWGYNSDGQLGLGSSGTYSTKNRPQKI---------NAISNVAAIACGGSHSLAVAR 1103
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
DG+L++WG N +GQLG G + P+KV + + V +I+ G + + A+ DG++
Sbjct: 1104 DGSLWSWGYNYYGQLGLGDNYSKTTPQKVNAISN--VAAIAAGEYYSLALTR----DGSV 1157
Query: 140 STSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECGLL 188
W WG N G N R TP + + ++ G H +AL+ G +
Sbjct: 1158 -----WSWGDNSDGQLGLGDNEDR-----NTPQKVEVLSNVAAIAAGEDHSLALTRDGSV 1207
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG N GQLG + P+ + + I ++ G HS A+SE G
Sbjct: 1208 WSWGRNSRGQLGLDDN-DDRNTPQPVT----------TISNIKAIAAGNSHSFAISEEGL 1256
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
+ WG GQLG + S E P++V + + ++ G HS ALT GAL+AWG
Sbjct: 1257 AWAWGYNYDGQLGIGTSGSLANENTPQKVKVISNVV--GLSGGNYHSLALTEDGALWAWG 1314
Query: 309 GSQAGQLG 316
+ GQ+G
Sbjct: 1315 DNDDGQIG 1322
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 170/370 (45%), Gaps = 64/370 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRK--HPEKVKQLQSEFVKSISCGAH 124
+A G + A+ +DG++++WG N GQLG G E P V L SI+ G
Sbjct: 497 VAAGGGFSLALKTDGSVWSWGNNGSGQLGLGLGENDDVFTPTNVDAL--PLAASIAAGGG 554
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-----ICQVSCG 175
A+A DG++ W WG+N G ++ P I + ++CG
Sbjct: 555 HALALAS----DGSV-----WSWGRNSVGQLGLGTGGTYSTENRPQKINAISNVAAIACG 605
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
H +AL+ G +WGYN YGQLG G PR + L + ++
Sbjct: 606 GSHSLALARDGSFWSWGYNYYGQLGLGDNVSKTT-PRKVNA----------LSNVVAMAA 654
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
G+ HS A++ +G +++WG + GQLG L D PR+V A+ + +A G HS
Sbjct: 655 GDRHSLALTLDGSLWSWGDNTYGQLG---LGDNDHRNTPRKVNAISNVVA--IAAGYRHS 709
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS 355
ALT G++++WG + GQLGLG ++D P+ + N ++ +A G++
Sbjct: 710 LALTRDGSVWSWGNNTRGQLGLG-----------DNDDRNTPQPVTTISN-IKAIAVGNN 757
Query: 356 HTLVYMRDGRIHGWGYN--------SYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH 407
+++ +G + WGYN ++G A+E + P V + V L+AG H
Sbjct: 758 YSIAISEEGLVWAWGYNCSGQLGIGTHGSLADENT-----PQKV-IVISNVVGLSAGSSH 811
Query: 408 SAVLADACSL 417
S L + +L
Sbjct: 812 SIALTEDGAL 821
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/327 (31%), Positives = 159/327 (48%), Gaps = 49/327 (14%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEG---RKHPEKVKQLQSEFVKSISCGA 123
IA G H A+ASDG++++WG N GQLG GT P+K+ + + V +I+CG
Sbjct: 549 IAAGGGHALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRPQKINAISN--VAAIACGG 606
Query: 124 HCTAAIAEPRENDGTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSV 177
+ A+A DG+ W WG N G N + + + ++ G
Sbjct: 607 SHSLALAR----DGS-----FWSWGYNYYGQLGLGDNVSKTTPRKVNALSNVVAMAAGDR 657
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H +AL+ G L +WG N YGQLG G + PR + + + ++ G
Sbjct: 658 HSLALTLDGSLWSWGDNTYGQLGLGDN-DHRNTPRKVNA----------ISNVVAIAAGY 706
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
HS A++ +G V++WG + GQLG L D P+ V + IK +A G +S A
Sbjct: 707 RHSLALTRDGSVWSWGNNTRGQLG---LGDNDDRNTPQPVTTISN--IKAIAVGNNYSIA 761
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIP--ILVVPNGVQLVACGHS 355
++ +G ++AWG + +GQLG+G + + +E N P ++V+ N V L A G S
Sbjct: 762 ISEEGLVWAWGYNCSGQLGIG----THGSLADE------NTPQKVIVISNVVGLSA-GSS 810
Query: 356 HTLVYMRDGRIHGWGYNSYGQAANEKS 382
H++ DG + WG N GQ A E++
Sbjct: 811 HSIALTEDGALWAWGNNEAGQIAAEEA 837
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 131/279 (46%), Gaps = 36/279 (12%)
Query: 144 LWVWGQNQGSNFPRLFWGA---FTPNTI-----ICQVSCGSVHVVALSECGLLQAWGYNE 195
LW WG N + FTP + +++ G H +AL+ G + +WGYN
Sbjct: 1002 LWSWGDNGTGQLGLGLGQSVNVFTPTKVDALPPAAKIAAGDNHALALAPDGSVWSWGYNS 1061
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
GQLG G + G K + ++ + + ++CG HS AV+ +G +++WG
Sbjct: 1062 DGQLGLGSS-----GTYSTKNRPQKINA---ISNVAAIACGGSHSLAVARDGSLWSWGYN 1113
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
GQLG L + P++V A+ + +A G +S ALT G++++WG + GQL
Sbjct: 1114 YYGQLG---LGDNYSKTTPQKVNAISNVAA--IAAGEYYSLALTRDGSVWSWGDNSDGQL 1168
Query: 316 GLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
GLG D RN P V V + V +A G H+L RDG + WG NS
Sbjct: 1169 GLG-------------DNEDRNTPQKVEVLSNVAAIAAGEDHSLALTRDGSVWSWGRNSR 1215
Query: 375 GQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLAD 413
GQ + + P PV + ++ +AAG HS +++
Sbjct: 1216 GQLGLDDNDDRNTPQPVT-TISNIKAIAAGNSHSFAISE 1253
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 168/371 (45%), Gaps = 66/371 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRK--HPEKVKQLQSEFVKSISCGAH 124
+A G + A+ +DG+L++WG N GQLG G + P KV L I+ G +
Sbjct: 986 VAAGGNFSLALKTDGSLWSWGDNGTGQLGLGLGQSVNVFTPTKVDALPP--AAKIAAGDN 1043
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-----ICQVSCG 175
A+A DG++ W WG N G ++ P I + ++CG
Sbjct: 1044 HALALAP----DGSV-----WSWGYNSDGQLGLGSSGTYSTKNRPQKINAISNVAAIACG 1094
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFL-DEAPELEKITQVS 234
H +A++ G L +WGYN YGQLG G Y+K + + + ++
Sbjct: 1095 GSHSLAVARDGSLWSWGYNYYGQLGLG------------DNYSKTTPQKVNAISNVAAIA 1142
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVH 294
GEY+S A++ +G V++WG S GQLG L + P++V L + +A G H
Sbjct: 1143 AGEYYSLALTRDGSVWSWGDNSDGQLG---LGDNEDRNTPQKVEVLSNVAA--IAAGEDH 1197
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGH 354
S ALT G++++WG + GQLGL +++D P+ + N ++ +A G+
Sbjct: 1198 SLALTRDGSVWSWGRNSRGQLGL-----------DDNDDRNTPQPVTTISN-IKAIAAGN 1245
Query: 355 SHTLVYMRDGRIHGWGYNSYGQ--------AANEKSTYAWYPSPVDWCVGEVRKLAAGGG 406
SH+ +G WGYN GQ ANE + P V + V L+ G
Sbjct: 1246 SHSFAISEEGLAWAWGYNYDGQLGIGTSGSLANENT-----PQKVK-VISNVVGLSGGNY 1299
Query: 407 HSAVLADACSL 417
HS L + +L
Sbjct: 1300 HSLALTEDGAL 1310
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 167/419 (39%), Gaps = 72/419 (17%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+++ WG N SGQ G PK P A + IA G H+ A+ SDG
Sbjct: 287 SVWAWGANGSGQLGFG----DFETPKA--PGRVSSLADVTA----IASGWFHSLALTSDG 336
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
L+ WG N G+LG + P +V + + S + G + AIA DG++
Sbjct: 337 VLWAWGNNGDGRLGTDATSDQSLPAQVSSISNAV--SFAGGQRHSLAIAA----DGSV-- 388
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPNTIICQV----SCGSVHVVALSE------------- 184
W WG G+ + +L + TP +++ V S H+ ++
Sbjct: 389 ---WSWG---GNAYGQLGVESLTPASVLTPVHTLYSGEDFHLFYDTDGDGAANIWDDDDD 442
Query: 185 ----------CGLLQAWGYNEYGQLGRGITCEGLQGP--RVIKGYAKFLDEAPELEKITQ 232
C + G + G G C+G G ++ G++ + P
Sbjct: 443 GDGFLDESDNCPCVSNPGQEDEDGDGTGDFCDGCPGDFFKIQPGFSGCGNPNP------M 496
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
V+ G S A+ +G V++WG GQLG ++ D P V AL +A GG
Sbjct: 497 VAAGGGFSLALKTDGSVWSWGNNGSGQLGLGLGEN-DDVFTPTNVDAL--PLAASIAAGG 553
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVAC 352
H+ AL S G++++WG + + T R I + N V +AC
Sbjct: 554 GHALALASDGSVWSWGRNSV--------GQLGLGTGGTYSTENRPQKINAISN-VAAIAC 604
Query: 353 GHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
G SH+L RDG WGYN YGQ + P V+ + V +AAG HS L
Sbjct: 605 GGSHSLALARDGSFWSWGYNYYGQLGLGDNVSKTTPRKVN-ALSNVVAMAAGDRHSLAL 662
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 92/199 (46%), Gaps = 30/199 (15%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+++ WG N GQ G G P+++ A S + IA G+ H+ A+ DG
Sbjct: 667 SLWSWGDNTYGQLGL-GDNDHRNTPRKV---------NAISNVVAIAAGYRHSLALTRDG 716
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
++++WG N GQLG G + R P+ V + + +K+I+ G + + AI+E
Sbjct: 717 SVWSWGNNTRGQLGLGDNDDRNTPQPVTTISN--IKAIAVGNNYSIAISE---------E 765
Query: 142 SRLWVWGQNQGSNFPRLFWGAF----TPNTIIC-----QVSCGSVHVVALSECGLLQAWG 192
+W WG N G+ TP +I +S GS H +AL+E G L AWG
Sbjct: 766 GLVWAWGYNCSGQLGIGTHGSLADENTPQKVIVISNVVGLSAGSSHSIALTEDGALWAWG 825
Query: 193 YNEYGQLGRGITCEGLQGP 211
NE GQ+ E + P
Sbjct: 826 NNEAGQIAAEEAIEYIDNP 844
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 12/101 (11%)
Query: 17 IPAKSAIYVWGYNHSGQ--TGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHT 74
I + + WGYN+ GQ G G P+++ S + ++ G+ H+
Sbjct: 1251 ISEEGLAWAWGYNYDGQLGIGTSGSLANENTPQKVK---------VISNVVGLSGGNYHS 1301
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
A+ DG L+ WG N+ GQ+G T RK+P +V Q F
Sbjct: 1302 LALTEDGALWAWGDNDDGQIG-STGGDRKNPVQVFQSSEVF 1341
>gi|301755552|ref|XP_002913643.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
[Ailuropoda melanoleuca]
Length = 1129
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 154/312 (49%), Gaps = 52/312 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G ER+ P+Q+ A A+ + +ACG H+ A++ G
Sbjct: 134 VYTCGLNTKGQLGH---EREGNKPEQIG-------ALADQHIVHVACGESHSLALSDRGQ 183
Query: 83 LFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
LF+WGA GQLG TE+ P +++L + + +SCG HC A A DG
Sbjct: 184 LFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA-----DG--- 235
Query: 141 TSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
+ + WG+N G FP +P + + QV+ G H ALS G
Sbjct: 236 --QFFTWGKNSHGQLGLGKEFP----SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 289
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ WG N GQLG E + P + K L +K+ +SCGE H+A ++++G
Sbjct: 290 VFGWGMNNAGQLGLSDE-EDRESP----CHVKLL----RTQKVVYISCGEEHTAVLTKSG 340
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYA 306
V+T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG H+ A S G +YA
Sbjct: 341 GVFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 397
Query: 307 WGGSQAGQLGLG 318
+G GQLG G
Sbjct: 398 FGCGARGQLGTG 409
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/342 (31%), Positives = 161/342 (47%), Gaps = 32/342 (9%)
Query: 82 TLFTWGANEFGQLGDGT--EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
T+ WG GQ G T + P+ + VK ++CG + + + E DG +
Sbjct: 79 TMLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLE----DGEV 134
Query: 140 STSRLWVWGQ---NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
T L GQ + N P GA I+ V+CG H +ALS+ G L +WG
Sbjct: 135 YTCGLNTKGQLGHEREGNKPEQI-GALADQHIV-HVACGESHSLALSDRGQLFSWGAGSD 192
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG T + + PR+I+ + + I QVSCG +H A++ +G+ +TWG S
Sbjct: 193 GQLGLMTTEDSVAVPRLIQKLNQ--------QTILQVSCGNWHCLALAADGQFFTWGKNS 244
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
GQLG + + P+RV +L+GI + VA GG HS AL+ GA++ WG + AGQLG
Sbjct: 245 HGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 302
Query: 317 LGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
L + ES + + L+ V ++CG HT V + G + +G S GQ
Sbjct: 303 LSDEED------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 352
Query: 377 AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
++ P V +G EV ++A G H+ + L
Sbjct: 353 LGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 394
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 35/252 (13%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+ ++ WG GQ G E + +P+ + L ++CG+ H A+A+
Sbjct: 181 RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL-------NQQTILQVSCGNWHCLALAA 233
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG FTWG N GQLG G E + P++V+ L+ + ++ G + A++
Sbjct: 234 DGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-------- 285
Query: 139 ISTSRLWVWGQNQGSNF--------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
+ ++ WG N + +SCG H L++ G +
Sbjct: 286 -LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFT 344
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEV 249
+G GQLG + + RV++ ++TQ++CG H+ A V +G +
Sbjct: 345 FGAGSCGQLGHDSMNDEVNPRRVLELMG---------SEVTQIACGRQHTLAFVPSSGLI 395
Query: 250 YTWGLGSVGQLG 261
Y +G G+ GQLG
Sbjct: 396 YAFGCGARGQLG 407
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPE----LFGCPAGANSRWLDIACGHE 72
+ A + WG N GQ G G+E P Q P+ L G P +A G
Sbjct: 231 LAADGQFFTWGKNSHGQLGL-GKE----FPSQASPQRVRSLEGIPLA------QVAAGGA 279
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
H+ A++ G +F WG N GQLG EE R+ P VK L+++ V ISCG TA + +
Sbjct: 280 HSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 339
Query: 133 --RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQ 189
G S +L N N R+ + + Q++CG H +A + GL+
Sbjct: 340 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLE---LMGSEVTQIACGRQHTLAFVPSSGLIY 396
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGY 217
A+G GQLG G TC ++ P +KGY
Sbjct: 397 AFGCGARGQLGTGHTC-NVKCPSPVKGY 423
>gi|408500692|ref|YP_006864611.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465516|gb|AFU71045.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1279
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 165/391 (42%), Gaps = 53/391 (13%)
Query: 24 YVWGYNHSGQTGRKGRERQL-RIPKQLPPELFGCPAGANSR--WLDIACGHEHTAAVASD 80
Y WG N GQ +K + + + P ++P P GA+S + +A G H A+ S+
Sbjct: 814 YAWGNNKYGQLAQKPADVSMQKTPVRIP-----LPDGADSSFTYTQVAAGDSHVLAIGSN 868
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +++WG N+ GQLGDGT R +P+ VK + K++ A + A EN
Sbjct: 869 GIVYSWGRNDHGQLGDGTTTDRYNPQPVKDTGGQPFKAVQVSAGVADSAAIDSEN----- 923
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFTPNTI-------------ICQVSCGSVHVVALSECGL 187
R++ WG + N QVS V+AL G
Sbjct: 924 --RVYTWGSESTGKGQTPAYSTTRKNPTPAADPDNPGQTLHAVQVSLNWSFVMALDADGN 981
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE-KITQVSCGEYHSAAVSEN 246
+ WGYN GQLG G + YA P + +Q+S G +H+ A+ +
Sbjct: 982 VYTWGYNTNGQLGNGTSDS--------TSYASNPARLPSQSFQASQISAGSWHALAIDTD 1033
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDK-ELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
G +TWG GQLG S K + + + ++ G HS + G+L+
Sbjct: 1034 GNTWTWGYNGYGQLGDGSTSDKYKPQTVQNPTDTSQSLKATQISAGVDHSLVVDRDGSLW 1093
Query: 306 AWGGSQAGQLGLG---PQTRSFSLI-PNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
AWG + GQLG+G QT+ ++ P F+ + + G H+L
Sbjct: 1094 AWGWNSNGQLGIGNTVNQTKPATIKDPANKAQTFKAV----------RSSAGQLHSLAIR 1143
Query: 362 RDGRIHGWGYNSYGQAANEKS-TYAWYPSPV 391
+DG + WG N YGQ N ++ T P PV
Sbjct: 1144 QDGNLWAWGDNQYGQLGNNQTATRNTTPMPV 1174
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 149/344 (43%), Gaps = 48/344 (13%)
Query: 63 RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQ--SEFVKSIS 120
R+ ++ G H AVASDG L++WG+N+ GQLGDGT R P VK+ Q S+ +
Sbjct: 235 RFSQVSAGRGHILAVASDGNLYSWGSNDHGQLGDGTTAERHEPVPVKKPQGVSQDFTWVQ 294
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQN----------------QGSNFPRLFWGAFT 164
A ++ G S +L+ WG N + N P+ FT
Sbjct: 295 ASAGYLFSV-------GLGSDGKLYSWGDNTYGQLGNNTTTAHYTPEPVNLPQNAPSGFT 347
Query: 165 PNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
Q + GS+H + L G L +WG N++ QLG G T E R K
Sbjct: 348 ----WKQEAVGSLHALGLGSDGNLYSWGDNDHNQLGDGTTTE-----RHAPIQVKMPSGV 398
Query: 225 PELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF 284
P Q+S +HS A+ + +Y WG + G++G S+ D ++ P R+ G+
Sbjct: 399 PSGFAWKQMSGWGWHSLALGSDNWIYGWGANTRGEVGTGSIT--DNKITPVRIATPQGVP 456
Query: 285 IK----DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI 340
G +S A+ S G +Y WG G +G G + P ++ + P
Sbjct: 457 SNFTWGQFQMGDYYSQAIGSDGNIYTWGYGGNGNVGNGSTVDVYG--PTQA-----HKPN 509
Query: 341 LVVPN-GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKST 383
V+PN + V+ +L DG ++ WG N+ GQ + +T
Sbjct: 510 GVLPNFSWKQVSLLSVASLAIGSDGNLYSWGANNNGQLGDNTTT 553
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 156/395 (39%), Gaps = 78/395 (19%)
Query: 63 RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG 122
R+ ++ G + VASDG + WG N++GQL + P V ++ + G
Sbjct: 793 RFDQVSAGGSFSIGVASDGNAYAWGNNKYGQLA-------QKPADVSMQKTPVRIPLPDG 845
Query: 123 AHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVAL 182
A +FT QV+ G HV+A+
Sbjct: 846 ADS------------------------------------SFT----YTQVAAGDSHVLAI 865
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
G++ +WG N++GQLG G T + P+ +K D + K QVS G SAA
Sbjct: 866 GSNGIVYSWGRNDHGQLGDGTTTDRYN-PQPVK------DTGGQPFKAVQVSAGVADSAA 918
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG--IFIKDVACGGVHSCALTS 300
+ VYTWG S G+ + + K P G + V+ AL +
Sbjct: 919 IDSENRVYTWGSESTGKGQTPAYSTTRKNPTPAADPDNPGQTLHAVQVSLNWSFVMALDA 978
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHTL 358
G +Y WG + GQLG G ++S +Y N P + Q ++ G H L
Sbjct: 979 DGNVYTWGYNTNGQLGNG---------TSDSTSYASN-PARLPSQSFQASQISAGSWHAL 1028
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYP----SPVDWCVG-EVRKLAAGGGHSAVLAD 413
DG WGYN YGQ + ++ + P +P D + +++AG HS V+
Sbjct: 1029 AIDTDGNTWTWGYNGYGQLGDGSTSDKYKPQTVQNPTDTSQSLKATQISAGVDHSLVVDR 1088
Query: 414 ACSL-----KELCEFRLAESVTLSNASEIEDVASR 443
SL + + +V + + I+D A++
Sbjct: 1089 DGSLWAWGWNSNGQLGIGNTVNQTKPATIKDPANK 1123
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 152/385 (39%), Gaps = 67/385 (17%)
Query: 23 IYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG N GQ G ER +P + P + + W+ + G+ + + SDG
Sbjct: 255 LYSWGSNDHGQLGDGTTAERHEPVPVKKPQGV-----SQDFTWVQASAGYLFSVGLGSDG 309
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQ---SEFV-KSISCGAHCTAAIAEPRENDG 137
L++WG N +GQLG+ T PE V Q S F K + G+ +
Sbjct: 310 KLYSWGDNTYGQLGNNTTTAHYTPEPVNLPQNAPSGFTWKQEAVGSLHALGLG------- 362
Query: 138 TISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGS---------------VHVVAL 182
S L+ WG N + +L G T QV S H +AL
Sbjct: 363 --SDGNLYSWGDNDHN---QLGDGTTTERHAPIQVKMPSGVPSGFAWKQMSGWGWHSLAL 417
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
+ WG N G++G G + P I P Q G+Y+S A
Sbjct: 418 GSDNWIYGWGANTRGEVGTGSITDNKITPVRIA----TPQGVPSNFTWGQFQMGDYYSQA 473
Query: 243 VSENGEVYTWGLGSVGQLGHCS---LQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT 299
+ +G +YTWG G G +G+ S + + P V L K V+ V S A+
Sbjct: 474 IGSDGNIYTWGYGGNGNVGNGSTVDVYGPTQAHKPNGV--LPNFSWKQVSLLSVASLAIG 531
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV-----PNG---VQLVA 351
S G LY+WG + GQLG ++ T RN PI V P G VQ A
Sbjct: 532 SDGNLYSWGANNNGQLG-------------DNTTTQRNTPIRVAAPQNAPTGLTWVQASA 578
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQ 376
+++ DG ++ WG N+ GQ
Sbjct: 579 GWDNNSFGLASDGNLYSWGKNANGQ 603
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 169/424 (39%), Gaps = 75/424 (17%)
Query: 23 IYVWGYNHSGQTGRKG---RERQLRI--PKQLPPELFGCPAGANSRWLDIACGHEHTA-A 76
+Y WG N++GQ G R +R+ P+ P L W+ + G ++ +
Sbjct: 536 LYSWGANNNGQLGDNTTTQRNTPIRVAAPQNAPTGL---------TWVQASAGWDNNSFG 586
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG----------AHCT 126
+ASDG L++WG N GQLGD T R P +V + V ++S G A T
Sbjct: 587 LASDGNLYSWGKNANGQLGDNTTNDRHIPGRVNMPGTTTVTAVSFGGTAGTNITRNADGT 646
Query: 127 AAIAEPRENDGTISTSRLWVW-GQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
++ P G + T+ W GQ ++ P + ++T SC +
Sbjct: 647 WSVTTPAHARGRVDTAVSWTLNGQQPDAHLPYRYLDSYTVTFTSADSSC-------PTPS 699
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI----TQVSCGEYHSA 241
G+ Q+ E Q R G + G+ F +A KI +Q G A
Sbjct: 700 GMPQSQTVTEGRQAKRPSPDPKANG-CLFDGW--FTKDANNDSKIAYDFSQPVTGNITLA 756
Query: 242 AVSENGEVYTWGL----GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
A + W L G+V H ++ + R GI V+ GG S
Sbjct: 757 AHWTRMDTR-WALNPDKGNVLGGQHVTIT---PPTINR------GIRFDQVSAGGSFSIG 806
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQ------LV 350
+ S G YAWG ++ GQL P +D + P+ + +P+G V
Sbjct: 807 VASDGNAYAWGNNKYGQLAQKP-----------ADVSMQKTPVRIPLPDGADSSFTYTQV 855
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRK---LAAGGGH 407
A G SH L +G ++ WG N +GQ + +T + P PV G+ K ++AG
Sbjct: 856 AAGDSHVLAIGSNGIVYSWGRNDHGQLGDGTTTDRYNPQPVKDTGGQPFKAVQVSAGVAD 915
Query: 408 SAVL 411
SA +
Sbjct: 916 SAAI 919
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 89/208 (42%), Gaps = 41/208 (19%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQ--LRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
A +Y WGYN +GQ G + P +LP + F I+ G H A
Sbjct: 978 ADGNVYTWGYNTNGQLGNGTSDSTSYASNPARLPSQSFQA--------SQISAGSWHALA 1029
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQL----QSEFVKSISCGAHCTAAIAEP 132
+ +DG +TWG N +GQLGDG+ + P+ V+ QS IS G + +
Sbjct: 1030 IDTDGNTWTWGYNGYGQLGDGSTSDKYKPQTVQNPTDTSQSLKATQISAGVDHSLVV--- 1086
Query: 133 RENDGTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-----------ICQVSCGSV 177
+ DG+ LW WG N +L G P TI + S G +
Sbjct: 1087 -DRDGS-----LWAWGWNSNG---QLGIGNTVNQTKPATIKDPANKAQTFKAVRSSAGQL 1137
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITC 205
H +A+ + G L AWG N+YGQLG T
Sbjct: 1138 HSLAIRQDGNLWAWGDNQYGQLGNNQTA 1165
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 126/344 (36%), Gaps = 81/344 (23%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANS--RWLDIACGHEHTAAVASD 80
+Y WG N GQ G PE P A S W A G H + SD
Sbjct: 311 LYSWGDNTYGQLGNNTTTAHYT------PEPVNLPQNAPSGFTWKQEAVGSLHALGLGSD 364
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQ---LQSEFV-KSIS---------------- 120
G L++WG N+ QLGDGT R P +VK + S F K +S
Sbjct: 365 GNLYSWGDNDHNQLGDGTTTERHAPIQVKMPSGVPSGFAWKQMSGWGWHSLALGSDNWIY 424
Query: 121 -CGAHCTAAIAEPRENDGTISTSRL---------WVWGQNQ---------GSNFPRLFWG 161
GA+ + D I+ R+ + WGQ Q GS+ WG
Sbjct: 425 GWGANTRGEVGTGSITDNKITPVRIATPQGVPSNFTWGQFQMGDYYSQAIGSDGNIYTWG 484
Query: 162 --------------------AFTPNTIIC-----QVSCGSVHVVALSECGLLQAWGYNEY 196
A PN ++ QVS SV +A+ G L +WG N
Sbjct: 485 YGGNGNVGNGSTVDVYGPTQAHKPNGVLPNFSWKQVSLLSVASLAIGSDGNLYSWGANNN 544
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG-EYHSAAVSENGEVYTWGLG 255
GQLG T + RV AP Q S G + +S ++ +G +Y+WG
Sbjct: 545 GQLGDNTTTQRNTPIRVAA-----PQNAPTGLTWVQASAGWDNNSFGLASDGNLYSWGKN 599
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT 299
+ GQLG + + +P RV + V+ GG +T
Sbjct: 600 ANGQLGDNTT---NDRHIPGRVNMPGTTTVTAVSFGGTAGTNIT 640
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 81/180 (45%), Gaps = 13/180 (7%)
Query: 208 LQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQS 267
+QGP P + +QVS G H AV+ +G +Y+WG GQLG +
Sbjct: 214 VQGPVAGGTKVTLTPPGPRGIRFSQVSAGRGHILAVASDGNLYSWGSNDHGQLGDGTTAE 273
Query: 268 GDKELLPRRV--VALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
+ + ++ V+ D +++ + G + S L S G LY+WG + GQLG T ++
Sbjct: 274 RHEPVPVKKPQGVSQDFTWVQ-ASAGYLFSVGLGSDGKLYSWGDNTYGQLGNNTTTAHYT 332
Query: 326 LIPNESDTYFRNIPILVVPNGV--QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKST 383
P N+P P+G + A G H L DG ++ WG N + Q + +T
Sbjct: 333 PEP-------VNLP-QNAPSGFTWKQEAVGSLHALGLGSDGNLYSWGDNDHNQLGDGTTT 384
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 20/118 (16%)
Query: 282 GIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL 341
GI V+ G H A+ S G LY+WG + GQLG G T R+ P+
Sbjct: 233 GIRFSQVSAGRGHILAVASDGNLYSWGSNDHGQLGDG-------------TTAERHEPVP 279
Query: 342 VV-PNGVQL------VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVD 392
V P GV + G+ ++ DG+++ WG N+YGQ N +T + P PV+
Sbjct: 280 VKKPQGVSQDFTWVQASAGYLFSVGLGSDGKLYSWGDNTYGQLGNNTTTAHYTPEPVN 337
>gi|432095949|gb|ELK26864.1| Putative E3 ubiquitin-protein ligase HERC3 [Myotis davidii]
Length = 1031
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/312 (34%), Positives = 154/312 (49%), Gaps = 52/312 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G GRE PE G A A+ + +ACG H+ A++ G
Sbjct: 55 VYTCGLNTKGQLGH-GREGN-------KPEQIG--ALADQHIVHVACGESHSLALSDRGQ 104
Query: 83 LFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
LF+WGA GQLG TE+ P +++L + + +SCG HC A A DG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA-----DG--- 156
Query: 141 TSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
+ + WG+N G +FP +P + + QV+ G H ALS G
Sbjct: 157 --QFFTWGKNSHGQLGLGKDFP----SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ WG N GQLG E + P + K L +K+ +SCGE H+A ++++G
Sbjct: 211 VFGWGMNNAGQLGLSDE-EDRESP----CHVKLL----RTQKVVYISCGEEHTAVLTKSG 261
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYA 306
V+T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG H+ A S G +YA
Sbjct: 262 GVFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 307 WGGSQAGQLGLG 318
+G GQLG G
Sbjct: 319 FGCGARGQLGTG 330
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 161/341 (47%), Gaps = 32/341 (9%)
Query: 83 LFTWGANEFGQLGDGTE-EG-RKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG GQ G T +G P+ + VK ++CG + + + E DG +
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLE----DGEVY 56
Query: 141 TSRLWVWGQ---NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T L GQ + N P GA I+ V+CG H +ALS+ G L +WG G
Sbjct: 57 TCGLNTKGQLGHGREGNKPEQI-GALADQHIV-HVACGESHSLALSDRGQLFSWGAGSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG T + + PR+I+ + + I QVSCG +H A++ +G+ +TWG S
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQ--------QTILQVSCGNWHCLALAADGQFFTWGKNSH 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG + + P+RV +L+GI + VA GG HS AL+ GA++ WG + AGQLGL
Sbjct: 167 GQLGLG--KDFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+ ES + + L+ V ++CG HT V + G + +G S GQ
Sbjct: 225 SDEED------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Query: 378 ANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
++ P V +G EV ++A G H+ + L
Sbjct: 275 GHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 107/252 (42%), Gaps = 35/252 (13%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+ ++ WG GQ G E + +P+ + L ++CG+ H A+A+
Sbjct: 102 RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL-------NQQTILQVSCGNWHCLALAA 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG FTWG N GQLG G + + P++V+ L+ + ++ G + A++
Sbjct: 155 DGQFFTWGKNSHGQLGLGKDFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-------- 206
Query: 139 ISTSRLWVWGQNQGSNF--------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
+ ++ WG N + +SCG H L++ G +
Sbjct: 207 -LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFT 265
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEV 249
+G GQLG + + RV++ ++TQ++CG H+ A V +G +
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMG---------SEVTQIACGRQHTLAFVPSSGLI 316
Query: 250 YTWGLGSVGQLG 261
Y +G G+ GQLG
Sbjct: 317 YAFGCGARGQLG 328
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPE----LFGCPAGANSRWLDIACGHE 72
+ A + WG N GQ G G++ P Q P+ L G P +A G
Sbjct: 152 LAADGQFFTWGKNSHGQLGL-GKD----FPSQASPQRVRSLEGIPLA------QVAAGGA 200
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
H+ A++ G +F WG N GQLG EE R+ P VK L+++ V ISCG TA + +
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260
Query: 133 --RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQ 189
G S +L N N R+ + + Q++CG H +A + GL+
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLE---LMGSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGY 217
A+G GQLG G TC ++ P +KGY
Sbjct: 318 AFGCGARGQLGTGHTC-NVKCPSPVKGY 344
>gi|291539013|emb|CBL12124.1| Fibronectin type III domain./Regulator of chromosome condensation
(RCC1) repeat [Roseburia intestinalis XB6B4]
Length = 1546
Score = 136 bits (342), Expect = 3e-29, Method: Composition-based stats.
Identities = 107/368 (29%), Positives = 171/368 (46%), Gaps = 64/368 (17%)
Query: 59 GANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKS 118
G NS ++ G H+ +A DG+L+ WG N+FGQ+GDGT + R P K+ + V S
Sbjct: 736 GINSYSQVLSLGDYHSGVIAQDGSLYMWGVNDFGQIGDGTTKNRYKPTKI----LDHVVS 791
Query: 119 ISCGAHCTAAIAEPRENDGTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTI---I 169
+S G + + AI + DG+ L++WG N G+ R + P I +
Sbjct: 792 VSLGDYYSGAITQ----DGS-----LYMWGSNVYGQIGDGTTEDR-----YKPTKILDHV 837
Query: 170 CQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK 229
VS G H A+++ G L WG N+ GQ+G G T + + ++ L+
Sbjct: 838 IAVSLGYCHSGAITQDGSLYMWGSNDSGQIGDGTTEDRYKPTKI-------------LDH 884
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ VS G HS A++++G +Y WG S G +G G E+ + LD + +
Sbjct: 885 VIAVSLGVSHSGAITQDGSLYMWGSNSRGGIG-----DGTTEVRYKPTKILDHVIAVSLQ 939
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
G +S A+T G+LY WG + G++G G E D Y + IL + V
Sbjct: 940 TG--NSGAITQDGSLYMWGSNVYGEIGDG----------TEEDRY-KPTKIL---DHVIA 983
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
V+ G H+ +DG ++ WG N YG+ + + P+ + + V ++ G GHS
Sbjct: 984 VSLGDDHSGAITQDGSLYMWGRNYYGEIGDGTEEDRYKPTKI---LDHVIAVSLGVGHSG 1040
Query: 410 VLADACSL 417
+ SL
Sbjct: 1041 AITQDGSL 1048
Score = 124 bits (310), Expect = 1e-25, Method: Composition-based stats.
Identities = 107/384 (27%), Positives = 172/384 (44%), Gaps = 73/384 (19%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I ++Y+WG N GQ G + + + K L + ++ G ++ A
Sbjct: 754 IAQDGSLYMWGVNDFGQIGDGTTKNRYKPTKIL------------DHVVSVSLGDYYSGA 801
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG+L+ WG+N +GQ+GDGT E R P K+ + V ++S G + AI + D
Sbjct: 802 ITQDGSLYMWGSNVYGQIGDGTTEDRYKPTKIL----DHVIAVSLGYCHSGAITQ----D 853
Query: 137 GTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTI---ICQVSCGSVHVVALSECGL 187
G+ L++WG N G+ R + P I + VS G H A+++ G
Sbjct: 854 GS-----LYMWGSNDSGQIGDGTTEDR-----YKPTKILDHVIAVSLGVSHSGAITQDGS 903
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
L WG N G +G G T E P I L+ + VS +S A++++G
Sbjct: 904 LYMWGSNSRGGIGDGTT-EVRYKPTKI------------LDHVIAVSLQTGNSGAITQDG 950
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
+Y WG G++G G +E + LD + V+ G HS A+T G+LY W
Sbjct: 951 SLYMWGSNVYGEIG-----DGTEEDRYKPTKILDHVIA--VSLGDDHSGAITQDGSLYMW 1003
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G + G++G G E D Y + IL + V V+ G H+ +DG ++
Sbjct: 1004 GRNYYGEIGDG----------TEEDRY-KPTKIL---DHVIAVSLGVGHSGAITQDGSLY 1049
Query: 368 GWGYNSYGQAANEKSTYAWYPSPV 391
WG+NS GQ + + + P+ +
Sbjct: 1050 MWGWNSDGQIGDGTTKARYTPTQI 1073
>gi|281344274|gb|EFB19858.1| hypothetical protein PANDA_001437 [Ailuropoda melanoleuca]
Length = 1050
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 154/312 (49%), Gaps = 52/312 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G ER+ P+Q+ A A+ + +ACG H+ A++ G
Sbjct: 55 VYTCGLNTKGQLGH---EREGNKPEQIG-------ALADQHIVHVACGESHSLALSDRGQ 104
Query: 83 LFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
LF+WGA GQLG TE+ P +++L + + +SCG HC A A DG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA-----DG--- 156
Query: 141 TSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
+ + WG+N G FP +P + + QV+ G H ALS G
Sbjct: 157 --QFFTWGKNSHGQLGLGKEFP----SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ WG N GQLG E + P + K L +K+ +SCGE H+A ++++G
Sbjct: 211 VFGWGMNNAGQLGLSDE-EDRESP----CHVKLL----RTQKVVYISCGEEHTAVLTKSG 261
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYA 306
V+T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG H+ A S G +YA
Sbjct: 262 GVFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 307 WGGSQAGQLGLG 318
+G GQLG G
Sbjct: 319 FGCGARGQLGTG 330
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 161/341 (47%), Gaps = 32/341 (9%)
Query: 83 LFTWGANEFGQLGDGTE-EG-RKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG GQ G T +G P+ + VK ++CG + + + E DG +
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLE----DGEVY 56
Query: 141 TSRLWVWGQ---NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T L GQ + N P GA I+ V+CG H +ALS+ G L +WG G
Sbjct: 57 TCGLNTKGQLGHEREGNKPEQI-GALADQHIV-HVACGESHSLALSDRGQLFSWGAGSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG T + + PR+I+ + + I QVSCG +H A++ +G+ +TWG S
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQ--------QTILQVSCGNWHCLALAADGQFFTWGKNSH 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG + + P+RV +L+GI + VA GG HS AL+ GA++ WG + AGQLGL
Sbjct: 167 GQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+ ES + + L+ V ++CG HT V + G + +G S GQ
Sbjct: 225 SDEED------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Query: 378 ANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
++ P V +G EV ++A G H+ + L
Sbjct: 275 GHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPE----LFGCPAGANSRWLDIACGHE 72
+ A + WG N GQ G G+E P Q P+ L G P +A G
Sbjct: 152 LAADGQFFTWGKNSHGQLGL-GKE----FPSQASPQRVRSLEGIPLA------QVAAGGA 200
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
H+ A++ G +F WG N GQLG EE R+ P VK L+++ V ISCG TA + +
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260
Query: 133 --RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQ 189
G S +L N N PR + + Q++CG H +A + GL+
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGY 217
A+G GQLG G TC ++ P +KGY
Sbjct: 318 AFGCGARGQLGTGHTC-NVKCPSPVKGY 344
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 35/252 (13%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+ ++ WG GQ G E + +P+ + L ++CG+ H A+A+
Sbjct: 102 RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ-------KLNQQTILQVSCGNWHCLALAA 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG FTWG N GQLG G E + P++V+ L+ + ++ G + A++
Sbjct: 155 DGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-------- 206
Query: 139 ISTSRLWVWGQNQGSNF--------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
+ ++ WG N + +SCG H L++ G +
Sbjct: 207 -LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFT 265
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEV 249
+G GQLG + + RV++ ++TQ++CG H+ A V +G +
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGS---------EVTQIACGRQHTLAFVPSSGLI 316
Query: 250 YTWGLGSVGQLG 261
Y +G G+ GQLG
Sbjct: 317 YAFGCGARGQLG 328
>gi|195376505|ref|XP_002047037.1| GJ12148 [Drosophila virilis]
gi|194154195|gb|EDW69379.1| GJ12148 [Drosophila virilis]
Length = 1053
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 175/393 (44%), Gaps = 84/393 (21%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG GQ G G E Q+ P Q+P + P A ++ +ACGH HT + + G
Sbjct: 3 LYCWGNASHGQLGLGGIEDEQILTPSQIPWK----PDSAVNQ---VACGHRHTLFLTASG 55
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
++ G+N++ QLG E K P ++ +L+
Sbjct: 56 KVYACGSNDYSQLGH--ELPTKRPLQIPELE----------------------------- 84
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGR 201
+ +I Q++CGS H +AL+E G + +WG NE GQLG
Sbjct: 85 ------------------------DYVITQIACGSRHSMALTEWGQVLSWGDNECGQLGH 120
Query: 202 GITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG 261
+ +Q P++++ + + Q++CG HS A++ GE+Y+WG GQLG
Sbjct: 121 ASDQDVIQLPKIVRYLVS--------KTVVQIACGNNHSLALTCCGELYSWGSNIYGQLG 172
Query: 262 HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQT 321
S + P R+ L GI +ACGG H+ ++ A++ WG + GQLGL +T
Sbjct: 173 VKSPSELSQCNYPMRLTTLLGIPAAAIACGGNHTFLISKSSAVFGWGRNNCGQLGLNDET 232
Query: 322 -RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANE 380
R++ P + T R + GV+ VACG ++ +G + G +YGQ +
Sbjct: 233 NRAY---PTQLKT-LRTL-------GVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHG 281
Query: 381 KSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
S+ P V +G + ++A G H+ L
Sbjct: 282 FSSNEMLPRMVMELMGSTISQVACGNRHTLALV 314
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 143/326 (43%), Gaps = 51/326 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y G N Q G + +P + P ++ P + IACG H+ A
Sbjct: 51 LTASGKVYACGSNDYSQLGHE-------LPTKRPLQI---PELEDYVITQIACGSRHSMA 100
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
+ G + +WG NE GQLG +++ + P+ V+ L S+ V I+CG + + A+
Sbjct: 101 LTEWGQVLSWGDNECGQLGHASDQDVIQLPKIVRYLVSKTVVQIACGNNHSLALT----- 155
Query: 136 DGTISTSRLWVWGQN-------------QGSNFP-RLFWGAFTPNTIICQVSCGSVHVVA 181
L+ WG N N+P RL P I +CG H
Sbjct: 156 ----CCGELYSWGSNIYGQLGVKSPSELSQCNYPMRLTTLLGIPAAAI---ACGGNHTFL 208
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
+S+ + WG N GQLG + Y L L + V+CG+ S
Sbjct: 209 ISKSSAVFGWGRNNCGQLGL--------NDETNRAYPTQLKTLRTL-GVRFVACGDEFSV 259
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-S 300
++ G V+T G G+ GQLGH E+LPR V+ L G I VACG H+ AL S
Sbjct: 260 FLTNEGGVFTCGAGAYGQLGH---GFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPS 316
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSL 326
+G +Y +G +GQLG T+S +L
Sbjct: 317 RGRIYGFGLGSSGQLG-TRNTKSLNL 341
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 93/202 (46%), Gaps = 22/202 (10%)
Query: 23 IYVWGYNHSGQTGRKGRER--QLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
+Y WG N GQ G K Q P +L L G PA A IACG HT ++
Sbjct: 160 LYSWGSNIYGQLGVKSPSELSQCNYPMRLT-TLLGIPAAA------IACGGNHTFLISKS 212
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+F WG N GQLG E R +P ++K L++ V+ ++CG + + N+G +
Sbjct: 213 SAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLT----NEGGVF 268
Query: 141 TSRLWVWGQ-----NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC-GLLQAWGYN 194
T +GQ + PR+ + I QV+CG+ H +AL G + +G
Sbjct: 269 TCGAGAYGQLGHGFSSNEMLPRMVMELM--GSTISQVACGNRHTLALVPSRGRIYGFGLG 326
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG T + L P+V+ G
Sbjct: 327 SSGQLGTRNT-KSLNLPQVVIG 347
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 71/167 (42%), Gaps = 15/167 (8%)
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
E+Y WG S GQLG ++ ++ L P ++ + VACG H+ LT+ G +YA
Sbjct: 2 ELYCWGNASHGQLGLGGIED-EQILTPSQIPWKPDSAVNQVACGHRHTLFLTASGKVYAC 60
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G + QLG T+ IP D I ACG H++ G++
Sbjct: 61 GSNDYSQLGHELPTKRPLQIPELEDYVITQI------------ACGSRHSMALTEWGQVL 108
Query: 368 GWGYNSYGQAAN-EKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
WG N GQ + P V + V + V ++A G HS L
Sbjct: 109 SWGDNECGQLGHASDQDVIQLPKIVRYLVSKTVVQIACGNNHSLALT 155
>gi|168050967|ref|XP_001777928.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670688|gb|EDQ57252.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 364
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 162/339 (47%), Gaps = 36/339 (10%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE--NDGTIS 140
++ G + GQLG G P + L + + I+ + TA + + E G+
Sbjct: 4 VYALGRGDLGQLGIGDYSDHPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTGSND 63
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLG 200
+L V G + R+ A ++ ++CG H VA++E G L +WG +EYGQLG
Sbjct: 64 AGQLGVRGMEEQVVPIRV---AALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQLG 120
Query: 201 --RGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVG 258
G +G+Q PR++KG ++V+ G YH+ A++ +G+VY++G GS G
Sbjct: 121 FDSGNIVDGVQ-PRIVKGSRDL--------HFSRVAAGGYHTLALTGSGDVYSFGDGSSG 171
Query: 259 QLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLG 318
LGH +L D P V +L G+ + +ACG HS ALT G ++ WG + GQLG G
Sbjct: 172 ALGHGNL---DGCSTPSLVKSLWGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHG 228
Query: 319 PQTRSFSLIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
T +P+ V V + V +ACG HTL DGR+ WG+ +G
Sbjct: 229 S-------------TQNIKLPVAVKALVDHDVIQIACGGDHTLAITSDGRLFSWGHGLWG 275
Query: 376 QAANEKSTYAWYPSPVDWCVGEVR-KLAAGGGHSAVLAD 413
Q + P V G V +++AG H+ VL D
Sbjct: 276 QTGHGTKEDVLSPKQVHQLEGRVLVQVSAGARHTVVLLD 314
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 150/316 (47%), Gaps = 45/316 (14%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
IA HTA + +G ++T G+N+ GQLG E + P +V L + V I+CG T
Sbjct: 40 IAASDYHTAFLTDEGEVYTTGSNDAGQLGVRGMEEQVVPIRVAALDTHMVTHIACGFKHT 99
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNF------------PRLFWGAFTPNTIICQVSC 174
A+ E T L WG ++ PR+ G + + +V+
Sbjct: 100 VAVTE---------TGALASWGGDEYGQLGFDSGNIVDGVQPRIVKG--SRDLHFSRVAA 148
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G H +AL+ G + ++G G LG G +G P ++K +TQ++
Sbjct: 149 GGYHTLALTGSGDVYSFGDGSSGALGHG-NLDGCSTPSLVKSLWGL--------GVTQIA 199
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVH 294
CGE HSAA++ +G+V+TWG G GQLGH S Q+ LP V AL + +ACGG H
Sbjct: 200 CGENHSAALTVDGKVFTWGRGKYGQLGHGSTQN---IKLPVAVKALVDHDVIQIACGGDH 256
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGH 354
+ A+TS G L++WG GQ G G T+ L P + + + V+ G
Sbjct: 257 TLAITSDGRLFSWGHGLWGQTGHG--TKEDVLSPKQVHQLEGRVLV--------QVSAGA 306
Query: 355 SHTLVYMRDGRIHGWG 370
HT+V + G ++GWG
Sbjct: 307 RHTVVLLDRGEVYGWG 322
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 142/305 (46%), Gaps = 41/305 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N +GQ G +G E Q+ +P ++ A IACG +HT AV G
Sbjct: 56 VYTTGSNDAGQLGVRGMEEQV-VPIRVA-------ALDTHMVTHIACGFKHTVAVTETGA 107
Query: 83 LFTWGANEFGQLG--DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE----ND 136
L +WG +E+GQLG G P VK + ++ G + T A+ + D
Sbjct: 108 LASWGGDEYGQLGFDSGNIVDGVQPRIVKGSRDLHFSRVAAGGYHTLALTGSGDVYSFGD 167
Query: 137 GTISTSRLWVWGQNQGSNFPRL---FWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
G+ S G G + P L WG + Q++CG H AL+ G + WG
Sbjct: 168 GS---SGALGHGNLDGCSTPSLVKSLWGLG-----VTQIACGENHSAALTVDGKVFTWGR 219
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
+YGQLG G T + ++ P +K + Q++CG H+ A++ +G +++WG
Sbjct: 220 GKYGQLGHGST-QNIKLPVAVKALVD--------HDVIQIACGGDHTLAITSDGRLFSWG 270
Query: 254 LGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
G GQ GH G KE L P++V L+G + V+ G H+ L +G +Y WG +
Sbjct: 271 HGLWGQTGH-----GTKEDVLSPKQVHQLEGRVLVQVSAGARHTVVLLDRGEVYGWGDCE 325
Query: 312 AGQLG 316
QLG
Sbjct: 326 QRQLG 330
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 76/177 (42%), Gaps = 39/177 (22%)
Query: 52 ELFGC--PAGANSRW----LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHP 105
L GC P+ S W IACG H+AA+ DG +FTWG ++GQLG G+ + K P
Sbjct: 177 NLDGCSTPSLVKSLWGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHGSTQNIKLP 236
Query: 106 EKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG---- 161
VK L V I+CG T AI S RL+ WG WG
Sbjct: 237 VAVKALVDHDVIQIACGGDHTLAIT---------SDGRLFSWGHG--------LWGQTGH 279
Query: 162 -----AFTPNT-------IICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCE 206
+P ++ QVS G+ H V L + G + WG E QLG C+
Sbjct: 280 GTKEDVLSPKQVHQLEGRVLVQVSAGARHTVVLLDRGEVYGWGDCEQRQLGTCDRCD 336
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 75/172 (43%), Gaps = 17/172 (9%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ ++ WG GQ G G + +++P + A + + IACG +HT A
Sbjct: 208 LTVDGKVFTWGRGKYGQLGH-GSTQNIKLPVAVK-------ALVDHDVIQIACGGDHTLA 259
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ SDG LF+WG +GQ G GT+E P++V QL+ + +S GA T + + E
Sbjct: 260 ITSDGRLFSWGHGLWGQTGHGTKEDVLSPKQVHQLEGRVLVQVSAGARHTVVLLDRGE-- 317
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG + F+ IC C V+ + C LL
Sbjct: 318 -------VYGWGDCEQRQLGTCDRCDFSTYGHICVSLCRCECVLMNTSCNLL 362
>gi|118092565|ref|XP_001231234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Gallus
gallus]
Length = 1056
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 164/373 (43%), Gaps = 77/373 (20%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N R D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----LNKRIRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE V L ++ + ++SCG T A+ + + G +
Sbjct: 57 TCGCNDLGQLGH--EKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR I QV+CG H +ALS+ + +WG N+YGQLG G
Sbjct: 115 QLGLPGTEECIRVPRNIKS--LSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKG--------------------------------------------YA 218
+ P VIK Y
Sbjct: 173 YEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYV 232
Query: 219 KFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
L ++ +K+ + CGE H+AA+++ G V+T+G G GQLGH S E+ PR+V
Sbjct: 233 PTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGH---NSTSHEINPRKVF 289
Query: 279 ALDGIFIKDVACGGVHSCALT-SKGALYAWGGSQAGQLGLGPQTRSFS------------ 325
L G + + CG H+ A S G +Y++G GQLG G + S
Sbjct: 290 ELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKGNWLPYS 349
Query: 326 ---LIPNESDTYF 335
LIP +S+ Y+
Sbjct: 350 TQCLIPADSEQYY 362
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 155/336 (46%), Gaps = 32/336 (9%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ ++ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P GA I+ VSCG H +AL++ G + AWG G
Sbjct: 57 TCGCNDLGQLGHEKARKRPE-HVGALDAQNIVA-VSCGEAHTLALNDKGQVYAWGLATDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG T E ++ PR IK ++ +I QV+CG YHS A+S+ EV++WG
Sbjct: 115 QLGLPGTEECIRVPRNIKSLSEI--------QIVQVACGYYHSLALSKGSEVFSWGQNKY 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG K+ P + +L GI +A GG HS LT GA++ WG ++ GQLGL
Sbjct: 167 GQLGLG--YEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+++D Y + + V + CG HT ++G + +G YGQ
Sbjct: 225 N----------DDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Query: 378 ANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
+ +++ P V +G V ++ G H+
Sbjct: 275 GHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFV 310
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 120/255 (47%), Gaps = 41/255 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG GQ G G E +R+P+ + + + + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLATDGQLGLPGTEECIRVPRNI-------KSLSEIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKH-PEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F+WG N++GQLG G E +++ P +K L F + + GAH
Sbjct: 155 GSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQ----GSN------FPRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
T+S + ++ WG+N+ G N P L T + + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVV--HICCGEDHTAALTKEGG 262
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSEN 246
+ +G YGQLG T + +V + +TQ++CG H+ A V +
Sbjct: 263 VFTFGAGGYGQLGHNSTSHEINPRKVFELMGSL---------VTQITCGRQHTTAFVPSS 313
Query: 247 GEVYTWGLGSVGQLG 261
G +Y++GLG GQLG
Sbjct: 314 GRIYSFGLGGNGQLG 328
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 93/202 (46%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G E + + + L G P + IA G H+ +
Sbjct: 156 SEVFSWGQNKYGQLGL-GYEYKKQNSPHVIKSLLGIP------FAQIAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG + R P +K L+++ V I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGYN 194
T +GQ N S+ PR + +++ Q++CG H A G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSLVTQITCGRQHTTAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTG-TTSNRKSPFTVKG 343
>gi|326923408|ref|XP_003207928.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Meleagris gallopavo]
Length = 1056
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 164/373 (43%), Gaps = 77/373 (20%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N R D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----LNKRIRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE V L ++ + ++SCG T A+ + + G +
Sbjct: 57 TCGCNDLGQLGH--EKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR I QV+CG H +ALS+ + +WG N+YGQLG G
Sbjct: 115 QLGLPGTEECIRVPRNIKS--LSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKG--------------------------------------------YA 218
+ P VIK Y
Sbjct: 173 YEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYV 232
Query: 219 KFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
L ++ +K+ + CGE H+AA+++ G V+T+G G GQLGH S E+ PR+V
Sbjct: 233 PTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGH---NSTSHEINPRKVF 289
Query: 279 ALDGIFIKDVACGGVHSCALT-SKGALYAWGGSQAGQLGLGPQTRSFS------------ 325
L G + + CG H+ A S G +Y++G GQLG G + S
Sbjct: 290 ELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKGNWLPYS 349
Query: 326 ---LIPNESDTYF 335
LIP +S+ Y+
Sbjct: 350 TQCLIPADSEQYY 362
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 155/336 (46%), Gaps = 32/336 (9%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ ++ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P GA I+ VSCG H +AL++ G + AWG G
Sbjct: 57 TCGCNDLGQLGHEKARKRPE-HVGALDAQNIVA-VSCGEAHTLALNDKGQVYAWGLATDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG T E ++ PR IK ++ +I QV+CG YHS A+S+ EV++WG
Sbjct: 115 QLGLPGTEECIRVPRNIKSLSEI--------QIVQVACGYYHSLALSKGSEVFSWGQNKY 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG K+ P + +L GI +A GG HS LT GA++ WG ++ GQLGL
Sbjct: 167 GQLGLGY--EYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+++D Y + + V + CG HT ++G + +G YGQ
Sbjct: 225 N----------DDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Query: 378 ANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
+ +++ P V +G V ++ G H+
Sbjct: 275 GHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFV 310
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 120/255 (47%), Gaps = 41/255 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG GQ G G E +R+P+ + + + + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLATDGQLGLPGTEECIRVPRNI-------KSLSEIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKH-PEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F+WG N++GQLG G E +++ P +K L F + + GAH
Sbjct: 155 GSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQ----GSN------FPRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
T+S + ++ WG+N+ G N P L T + + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVV--HICCGEDHTAALTKEGG 262
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSEN 246
+ +G YGQLG T + +V + +TQ++CG H+ A V +
Sbjct: 263 VFTFGAGGYGQLGHNSTSHEINPRKVFELMGSL---------VTQITCGRQHTTAFVPSS 313
Query: 247 GEVYTWGLGSVGQLG 261
G +Y++GLG GQLG
Sbjct: 314 GRIYSFGLGGNGQLG 328
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 93/202 (46%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G E + + + L G P + IA G H+ +
Sbjct: 156 SEVFSWGQNKYGQLGL-GYEYKKQNSPHVIKSLLGIP------FAQIAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG + R P +K L+++ V I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGYN 194
T +GQ N S+ PR + +++ Q++CG H A G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSLVTQITCGRQHTTAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTG-TTSNRKSPFTVKG 343
>gi|326923406|ref|XP_003207927.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Meleagris gallopavo]
Length = 1048
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 164/373 (43%), Gaps = 77/373 (20%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N R D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----LNKRIRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE V L ++ + ++SCG T A+ + + G +
Sbjct: 57 TCGCNDLGQLGH--EKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR I QV+CG H +ALS+ + +WG N+YGQLG G
Sbjct: 115 QLGLPGTEECIRVPRNIKS--LSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKG--------------------------------------------YA 218
+ P VIK Y
Sbjct: 173 YEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYV 232
Query: 219 KFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
L ++ +K+ + CGE H+AA+++ G V+T+G G GQLGH S E+ PR+V
Sbjct: 233 PTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGH---NSTSHEINPRKVF 289
Query: 279 ALDGIFIKDVACGGVHSCALT-SKGALYAWGGSQAGQLGLGPQTRSFS------------ 325
L G + + CG H+ A S G +Y++G GQLG G + S
Sbjct: 290 ELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKGNWLPYS 349
Query: 326 ---LIPNESDTYF 335
LIP +S+ Y+
Sbjct: 350 TQCLIPADSEQYY 362
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 155/336 (46%), Gaps = 32/336 (9%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ ++ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P GA I+ VSCG H +AL++ G + AWG G
Sbjct: 57 TCGCNDLGQLGHEKARKRPE-HVGALDAQNIVA-VSCGEAHTLALNDKGQVYAWGLATDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG T E ++ PR IK ++ +I QV+CG YHS A+S+ EV++WG
Sbjct: 115 QLGLPGTEECIRVPRNIKSLSEI--------QIVQVACGYYHSLALSKGSEVFSWGQNKY 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG K+ P + +L GI +A GG HS LT GA++ WG ++ GQLGL
Sbjct: 167 GQLGLGY--EYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+++D Y + + V + CG HT ++G + +G YGQ
Sbjct: 225 N----------DDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQL 274
Query: 378 ANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
+ +++ P V +G V ++ G H+
Sbjct: 275 GHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFV 310
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 120/255 (47%), Gaps = 41/255 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG GQ G G E +R+P+ + + + + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLATDGQLGLPGTEECIRVPRNI-------KSLSEIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKH-PEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F+WG N++GQLG G E +++ P +K L F + + GAH
Sbjct: 155 GSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQ----GSN------FPRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
T+S + ++ WG+N+ G N P L T + + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVV--HICCGEDHTAALTKEGG 262
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSEN 246
+ +G YGQLG T + +V + +TQ++CG H+ A V +
Sbjct: 263 VFTFGAGGYGQLGHNSTSHEINPRKVFELMGSL---------VTQITCGRQHTTAFVPSS 313
Query: 247 GEVYTWGLGSVGQLG 261
G +Y++GLG GQLG
Sbjct: 314 GRIYSFGLGGNGQLG 328
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 93/202 (46%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G E + + + L G P + IA G H+ +
Sbjct: 156 SEVFSWGQNKYGQLGL-GYEYKKQNSPHVIKSLLGIP------FAQIAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG + R P +K L+++ V I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGYN 194
T +GQ N S+ PR + +++ Q++CG H A G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSLVTQITCGRQHTTAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTG-TTSNRKSPFTVKG 343
>gi|261405028|ref|YP_003241269.1| hypothetical protein GYMC10_1173 [Paenibacillus sp. Y412MC10]
gi|261281491|gb|ACX63462.1| Listeria/Bacterioides repeat protein [Paenibacillus sp. Y412MC10]
Length = 1280
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 113/355 (31%), Positives = 169/355 (47%), Gaps = 53/355 (14%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
I G+ HTA++ S G +++WG + GQLGDGT R P K L V I G +
Sbjct: 38 IVAGYYHTASLVSSGEVYSWGYGDRGQLGDGTWNTRTTPVMAKNLN--HVIDIHSGVRSS 95
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-----ICQVSCG-S 176
A+ + DGT+ W WG N+ +L G T P + I +S G +
Sbjct: 96 MALRQ----DGTV-----WTWGANENG---QLGIGTITNVNAPAQVPGLSGIKAISGGLA 143
Query: 177 VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG 236
H +ALSE G + WG N+ G+LG G T + P ++ G L +T ++ G
Sbjct: 144 YHGMALSENGTVWTWGKNDNGELGNGTTIQ-QNSPVLVAG----------LSDVTAIAAG 192
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSC 296
Y+S A+ +G V+ WG+ G+LG + + D+ +P +V L + +A GG HS
Sbjct: 193 GYYSLALKSDGTVWAWGVNGSGELGDGT--TTDRH-VPVQVAGLTDVMA--IAAGGSHSL 247
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G ++AWG + G LG G TR+ P + RN+ +V VA G H
Sbjct: 248 AIKQDGTVWAWGNNTYGTLGDG--TRTHRTRPVQ----VRNLQHIVA------VAGGGYH 295
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
+L R G + WG NS Q + + P PV + VR+++AGG HS +
Sbjct: 296 SLAVDRAGNVWSWGDNSQQQLGLNSNASSLIPVPVP-GIEHVREISAGGFHSVAM 349
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 112/365 (30%), Positives = 166/365 (45%), Gaps = 64/365 (17%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WGY GQ G G P A + +DI G + A+ DGT
Sbjct: 54 VYSWGYGDRGQLG-DGTWNTRTTP---------VMAKNLNHVIDIHSGVRSSMALRQDGT 103
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGTIST 141
++TWGANE GQLG GT P +V L +K+IS G A+ A++E +GT+
Sbjct: 104 VWTWGANENGQLGIGTITNVNAPAQVPGLSG--IKAISGGLAYHGMALSE----NGTV-- 155
Query: 142 SRLWVWGQNQG----------SNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
W WG+N N P L G + + ++ G + +AL G + AW
Sbjct: 156 ---WTWGKNDNGELGNGTTIQQNSPVLVAGL----SDVTAIAAGGYYSLALKSDGTVWAW 208
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G N G+LG G T + P + G L + ++ G HS A+ ++G V+
Sbjct: 209 GVNGSGELGDGTTTD-RHVPVQVAG----------LTDVMAIAAGGSHSLAIKQDGTVWA 257
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG + G LG G + R V + I VA GG HS A+ G +++WG +
Sbjct: 258 WGNNTYGTLG-----DGTRTHRTRPVQVRNLQHIVAVAGGGYHSLAVDRAGNVWSWGDNS 312
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGY 371
QLGL + + SLIP +P+ + + V+ ++ G H++ +DG + GWGY
Sbjct: 313 QQQLGL--NSNASSLIP---------VPVPGIEH-VREISAGGFHSVAMKKDGTVWGWGY 360
Query: 372 NSYGQ 376
NS GQ
Sbjct: 361 NSGGQ 365
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 143/303 (47%), Gaps = 44/303 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHE-HTAAVASDG 81
++ WG N +GQ G G + P Q+P L G A I+ G H A++ +G
Sbjct: 104 VWTWGANENGQLG-IGTITNVNAPAQVP-GLSGIKA--------ISGGLAYHGMALSENG 153
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
T++TWG N+ G+LG+GT + P V L V +I+ G + + A+ ++DGT+
Sbjct: 154 TVWTWGKNDNGELGNGTTIQQNSPVLVAGLSD--VTAIAAGGYYSLAL----KSDGTV-- 205
Query: 142 SRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNE 195
W WG N G+ R T + ++ G H +A+ + G + AWG N
Sbjct: 206 ---WAWGVNGSGELGDGTTTDRHVPVQVAGLTDVMAIAAGGSHSLAIKQDGTVWAWGNNT 262
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
YG LG G + +V L+ I V+ G YHS AV G V++WG
Sbjct: 263 YGTLGDGTRTHRTRPVQV-----------RNLQHIVAVAGGGYHSLAVDRAGNVWSWGDN 311
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
S QLG L S L+P V ++ +++++ GG HS A+ G ++ WG + GQ+
Sbjct: 312 SQQQLG---LNSNASSLIPVPVPGIE--HVREISAGGFHSVAMKKDGTVWGWGYNSGGQI 366
Query: 316 GLG 318
G G
Sbjct: 367 GDG 369
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 124/294 (42%), Gaps = 46/294 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N +G+ G I + P + G S IA G ++ A+ SDGT
Sbjct: 155 VWTWGKNDNGELGNG-----TTIQQNSPVLVAGL-----SDVTAIAAGGYYSLALKSDGT 204
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG N G+LGDGT R P +V L V +I+ G + AI + DGT+
Sbjct: 205 VWAWGVNGSGELGDGTTTDRHVPVQVAGLTD--VMAIAAGGSHSLAIKQ----DGTV--- 255
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTI---------ICQVSCGSVHVVALSECGLLQAWGY 193
W WG N + L G T T I V+ G H +A+ G + +WG
Sbjct: 256 --WAWGNN---TYGTLGDGTRTHRTRPVQVRNLQHIVAVAGGGYHSLAVDRAGNVWSWGD 310
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
N QLG L V P +E + ++S G +HS A+ ++G V+ WG
Sbjct: 311 NSQQQLGLNSNASSLIPVPV-----------PGIEHVREISAGGFHSVAMKKDGTVWGWG 359
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
S GQ+G + + +P A+ D G ++ ++TS W
Sbjct: 360 YNSGGQIGDGTYN--NTRGIPTLTKAVLDTTSPDTGSGSLNPHSITSDSVALEW 411
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 109/243 (44%), Gaps = 32/243 (13%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
++ G H +L G + +WGY + GQLG +G R AK L +
Sbjct: 37 KIVAGYYHTASLVSSGEVYSWGYGDRGQLG-----DGTWNTRTTPVMAK------NLNHV 85
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
+ G S A+ ++G V+TWG GQLG ++ + + P +V L GI K ++
Sbjct: 86 IDIHSGVRSSMALRQDGTVWTWGANENGQLGIGTITNVNA---PAQVPGLSGI--KAISG 140
Query: 291 G-GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV-PNGVQ 348
G H AL+ G ++ WG + G+LG G T +N P+LV + V
Sbjct: 141 GLAYHGMALSENGTVWTWGKNDNGELGNGT-------------TIQQNSPVLVAGLSDVT 187
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
+A G ++L DG + WG N G+ + +T P V + +V +AAGG HS
Sbjct: 188 AIAAGGYYSLALKSDGTVWAWGVNGSGELGDGTTTDRHVPVQVA-GLTDVMAIAAGGSHS 246
Query: 409 AVL 411
+
Sbjct: 247 LAI 249
>gi|348563446|ref|XP_003467518.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Cavia
porcellus]
Length = 1050
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 152/312 (48%), Gaps = 52/312 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G ER+ P+Q+ A A+ + +ACG H+ A++ G
Sbjct: 55 VYTCGLNTKGQLGH---EREGNQPEQIG-------ALADQHIIHVACGESHSLALSDQGQ 104
Query: 83 LFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
LF+WGA GQLG TE+ P +++L + + +SCG HC A DG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLAL-----ATDG--- 156
Query: 141 TSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
+ + WG+N G FP +P + + QV+ G H ALS G
Sbjct: 157 --QFFTWGKNSHGQLGLGKEFP----SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ WG N GQLG + R + K L +K+ +SCGE H+A ++++G
Sbjct: 211 VFGWGMNNAGQLGLSD-----EKDRESPCHVKLL----RTQKVVYISCGEEHTAVLTKSG 261
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYA 306
V+T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG H+ A S G +YA
Sbjct: 262 GVFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 307 WGGSQAGQLGLG 318
+G GQLG G
Sbjct: 319 FGCGARGQLGTG 330
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/342 (31%), Positives = 159/342 (46%), Gaps = 34/342 (9%)
Query: 83 LFTWGANEFGQLGDGTEEG--RKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTI 139
+ WG GQ G GT P+ + VK ++CG HC + DG +
Sbjct: 1 MLCWGYWSLGQPGIGTHLRGIVAEPQACGFVSDRSVKEVACGGDHCVFLL-----EDGEV 55
Query: 140 STSRLWVWGQ---NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
T L GQ + N P GA II V+CG H +ALS+ G L +WG
Sbjct: 56 YTCGLNTKGQLGHEREGNQPEQI-GALADQHII-HVACGESHSLALSDQGQLFSWGAGSD 113
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG T + + PR+I+ + + I QVSCG +H A++ +G+ +TWG S
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQ--------QTILQVSCGNWHCLALATDGQFFTWGKNS 165
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
GQLG + + P+RV +L+GI + VA GG HS AL+ GA++ WG + AGQLG
Sbjct: 166 HGQLGLG--KEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 317 LGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
L + ES + + L+ V ++CG HT V + G + +G S GQ
Sbjct: 224 LSDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 377 AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
++ P V +G EV ++A G H+ + L
Sbjct: 274 LGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 94/202 (46%), Gaps = 22/202 (10%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPE----LFGCPAGANSRWLDIACGHEHTAAVA 78
+ WG N GQ G G+E P Q P+ L G P +A G H+ A++
Sbjct: 158 FFTWGKNSHGQLGL-GKE----FPSQTSPQRVRSLEGIPLA------QVAAGGAHSFALS 206
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP--REND 136
G +F WG N GQLG E+ R+ P VK L+++ V ISCG TA + +
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYNE 195
G S +L N N PR + + Q++CG H +A + GL+ A+G
Sbjct: 267 GAGSCGQLGHDSMNDEVN-PRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 196 YGQLGRGITCEGLQGPRVIKGY 217
GQLG G TC ++ P +KGY
Sbjct: 324 RGQLGTGHTC-NVKCPSPVKGY 344
>gi|410918052|ref|XP_003972500.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC3-like [Takifugu rubripes]
Length = 1031
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 117/358 (32%), Positives = 168/358 (46%), Gaps = 56/358 (15%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++Y G N GQ G + PE G A + ++CG H+ AV G
Sbjct: 53 SVYTCGSNSCGQLGHN--------KPGITPEFVG--ALDTQKITLVSCGQAHSLAVNEQG 102
Query: 82 TLFTWGANEFGQLGDGTEE-GRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGTI 139
+F WGA E GQLG GT E + P +K+L + + CG HC A DG
Sbjct: 103 QVFAWGAGEEGQLGLGTTETAVRIPRLIKRLCDHRIAQVMCGNQHCIAL-----SKDG-- 155
Query: 140 STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQ------------VSCGSVHVVALSECGL 187
+L+ WGQN +L G P+ + Q ++ G H ALS G
Sbjct: 156 ---QLFTWGQNTSG---QLGLGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGA 209
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ WG N+ GQLG +Q R + + KFL +K+ +SCGE H+AA++++G
Sbjct: 210 VFGWGKNKAGQLG----LNDIQD-RAVPCHIKFLRS----QKVVHISCGEEHTAALTKDG 260
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYA 306
++T+G GS GQLGH S + ELLPRRV+ L G + + CG H+ A S G +YA
Sbjct: 261 GLFTFGDGSWGQLGHGSTAN---ELLPRRVLELMGTEVSQITCGRHHTLAFAPSSGGVYA 317
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRD 363
+G + GQLG G + S P ++ +I V + CG H+ L+Y D
Sbjct: 318 FGCNSHGQLGTGVLSADKSPYPLKTSFLSGSI-----HGTVTKITCGGDHSFLLYSND 370
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 108/339 (31%), Positives = 159/339 (46%), Gaps = 39/339 (11%)
Query: 83 LFTWGANEFGQLGDGTEEGRK-HPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+ WG + GQLG G E P +K I CG + + +DG++ T
Sbjct: 1 MLCWGKAKDGQLGIGVERNPMFEPRNCNVFTGRGLKEIVCGGQHSVFLL----HDGSVYT 56
Query: 142 SRLWVWGQNQGSNFPRL---FWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQ 198
GQ G N P + F GA I VSCG H +A++E G + AWG E GQ
Sbjct: 57 CGSNSCGQ-LGHNKPGITPEFVGALDTQKITL-VSCGQAHSLAVNEQGQVFAWGAGEEGQ 114
Query: 199 LGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVG 258
LG G T ++ PR+IK +I QV CG H A+S++G+++TWG + G
Sbjct: 115 LGLGTTETAVRIPRLIKRLCD--------HRIAQVMCGNQHCIALSKDGQLFTWGQNTSG 166
Query: 259 QLGHCSLQSGD-KELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
QLG L G+ +L P+ + +L GI + + GG HS AL+ GA++ WG ++AGQLGL
Sbjct: 167 QLG---LGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGL 223
Query: 318 GPQTRSFSLIPNESDTYFRNIPI---LVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
+D R +P + V ++CG HT +DG + +G S+
Sbjct: 224 -------------NDIQDRAVPCHIKFLRSQKVVHISCGEEHTAALTKDGGLFTFGDGSW 270
Query: 375 GQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLA 412
GQ + + P V +G EV ++ G H+ A
Sbjct: 271 GQLGHGSTANELLPRRVLELMGTEVSQITCGRHHTLAFA 309
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 125/450 (27%), Positives = 188/450 (41%), Gaps = 66/450 (14%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFT 85
WG GQ G + P+ C +I CG +H+ + DG+++T
Sbjct: 4 WGKAKDGQLGIGVERNPMFEPR-------NCNVFTGRGLKEIVCGGQHSVFLLHDGSVYT 56
Query: 86 WGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLW 145
G+N GQLG + PE V L ++ + +SCG + A+ E +++
Sbjct: 57 CGSNSCGQLGHN--KPGITPEFVGALDTQKITLVSCGQAHSLAVNE---------QGQVF 105
Query: 146 VWGQNQ-----------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
WG + PRL + I QV CG+ H +ALS+ G L WG N
Sbjct: 106 AWGAGEEGQLGLGTTETAVRIPRLI--KRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQN 163
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
GQLG G P+ +K A + +++ G HS A+S +G V+ WG
Sbjct: 164 TSGQLGLGKGEPSKLFPQPLKSLAGI--------PLAKITAGGDHSFALSLSGAVFGWGK 215
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG +Q +P + L + ++CG H+ ALT G L+ +G GQ
Sbjct: 216 NKAGQLGLNDIQD---RAVPCHIKFLRSQKVVHISCGEEHTAALTKDGGLFTFGDGSWGQ 272
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNS 373
LG G L+P + ++ V + CG HTL + G ++ +G NS
Sbjct: 273 LGHGSTAN--ELLPRRV--------LELMGTEVSQITCGRHHTLAFAPSSGGVYAFGCNS 322
Query: 374 YGQAAN-----EKSTYAWYPSPVDWCV-GEVRKLAAGGGHSAVLADACSLKELCE-FRLA 426
+GQ +KS Y S + + G V K+ GG HS +L E E FR+
Sbjct: 323 HGQLGTGVLSADKSPYPLKTSFLSGSIHGTVTKITCGGDHSFLLYSNDQNSEYPEDFRV- 381
Query: 427 ESVTLSNA-SEIEDVASRTGSEALARLCER 455
+ +SNA S I R S L +C +
Sbjct: 382 --INISNAISPIN--YERLNSWRLKMMCNK 407
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 108/232 (46%), Gaps = 23/232 (9%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N SGQ G E P+ L L G P I G +H+ A++ G
Sbjct: 157 LFTWGQNTSGQLGLGKGEPSKLFPQPLK-SLAGIPLAK------ITAGGDHSFALSLSGA 209
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F WG N+ GQLG + R P +K L+S+ V ISCG TAA+ + DG + T
Sbjct: 210 VFGWGKNKAGQLGLNDIQDRAVPCHIKFLRSQKVVHISCGEEHTAALTK----DGGLFTF 265
Query: 143 RLWVWGQ-NQGSN----FPRLFWGAFTPNTIICQVSCGSVHVVALS-ECGLLQAWGYNEY 196
WGQ GS PR T + Q++CG H +A + G + A+G N +
Sbjct: 266 GDGSWGQLGHGSTANELLPRRVLELM--GTEVSQITCGRHHTLAFAPSSGGVYAFGCNSH 323
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
GQLG G+ + P +K FL + +T+++CG HS + N +
Sbjct: 324 GQLGTGVLSAD-KSPYPLK--TSFLSGSIH-GTVTKITCGGDHSFLLYSNDQ 371
>gi|408500311|ref|YP_006864230.1| putative regulator of chromosome condensation, RCC1 [Bifidobacterium
asteroides PRL2011]
gi|408465135|gb|AFU70664.1| putative regulator of chromosome condensation, RCC1 [Bifidobacterium
asteroides PRL2011]
Length = 1160
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 120/396 (30%), Positives = 183/396 (46%), Gaps = 50/396 (12%)
Query: 24 YVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANS--RWLDIACGHEHTAAVASDG 81
Y WG N+ GQ G ++ + P + PAGA++ ++ ++ G E + AV SDG
Sbjct: 689 YAWGRNNYGQLGDGTLTQRNK------PVIVKKPAGASADFTYVQVSAGDEQSLAVGSDG 742
Query: 82 TLFTWGANEFGQLGDGTEEGRKH-PEKVKQLQSE----FVKSISCGAHCTAAIAEPREND 136
++ WG NE GQLG+G+ G P +V +S G + + A+ + R N
Sbjct: 743 YVYAWGNNESGQLGNGSSGGYSTVPLRVIDPNDPRSGLTAVQVSAGYYHSLAL-DARGN- 800
Query: 137 GTISTSRLWVWGQNQ----------GSNFPRLFWGAFTPNTIIC-QVSCGSVHVVALSEC 185
+W WG NQ S P L T+ QVS G H A+
Sbjct: 801 -------IWAWGFNQFGELGNGNNINSAIPTLAQYPRDAGTVTAIQVSGGFHHTAAIDTK 853
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G +WG+N +GQLG G + I ++ +A + I QVS G HS +
Sbjct: 854 GNTWSWGWNWFGQLGNGNNID-----SAIPVPVQYPRDAGTVRAI-QVSAGADHSLIIDT 907
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG---IFIKDVACGGVHSCALTSKG 302
G + WG +G+LG+ S S D +P V + + V+ GG HS A+ G
Sbjct: 908 KGNTWAWGWNQLGELGNGS-SSADANPVPGMVKYPENAGTVTAIQVSAGGYHSLAIDKNG 966
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
+AWGG+ +G+LG+G T S S IP Y +N + VQ+ A G+ H+L +
Sbjct: 967 NAWAWGGNDSGELGIG--TTSKSEIPALVQ-YPKNAGAVTT---VQVSAGGY-HSLGIDK 1019
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEV 398
+G+ WGYN +GQ N + + P+PV + + +V
Sbjct: 1020 EGKTWAWGYNQFGQLGNGTISNSSIPTPVAFNLSQV 1055
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 163/359 (45%), Gaps = 47/359 (13%)
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQ---LQSEFVK-SISCGAHCTAAI 129
T AV SDG + WG N +GQLGDGT R P VK+ ++F +S G + A+
Sbjct: 679 TLAVGSDGNAYAWGRNNYGQLGDGTLTQRNKPVIVKKPAGASADFTYVQVSAGDEQSLAV 738
Query: 130 AEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT--------PNT-----IICQVSCGS 176
+DG + + WG N+ G ++ PN QVS G
Sbjct: 739 G----SDGYV-----YAWGNNESGQLGNGSSGGYSTVPLRVIDPNDPRSGLTAVQVSAGY 789
Query: 177 VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG 236
H +AL G + AWG+N++G+LG G I A++ +A + I QVS G
Sbjct: 790 YHSLALDARGNIWAWGFNQFGELGNGNNIN-----SAIPTLAQYPRDAGTVTAI-QVSGG 843
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKEL---LPRRVVALDGIFIKDVACGGV 293
+H+AA+ G ++WG GQLG+ + + PR + I V+ G
Sbjct: 844 FHHTAAIDTKGNTWSWGWNWFGQLGNGNNIDSAIPVPVQYPRDAGTVRAI---QVSAGAD 900
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG 353
HS + +KG +AWG +Q G+LG G + + +P Y N + +Q+ A G
Sbjct: 901 HSLIIDTKGNTWAWGWNQLGELGNGSSSADANPVPGMVK-YPENAGTVTA---IQVSAGG 956
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWC--VGEVR--KLAAGGGHS 408
+ H+L ++G WG N G+ ++ + P+ V + G V +++AGG HS
Sbjct: 957 Y-HSLAIDKNGNAWAWGGNDSGELGIGTTSKSEIPALVQYPKNAGAVTTVQVSAGGYHS 1014
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 143/325 (44%), Gaps = 42/325 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG N SGQ G +P ++ + + + ++ G+ H+ A+ + G
Sbjct: 744 VYAWGNNESGQLGNGSSGGYSTVPLRV---IDPNDPRSGLTAVQVSAGYYHSLALDARGN 800
Query: 83 LFTWGANEFGQLGDGTEEGRKHP---EKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
++ WG N+FG+LG+G P + + + +S G H TAAI
Sbjct: 801 IWAWGFNQFGELGNGNNINSAIPTLAQYPRDAGTVTAIQVSGGFHHTAAID--------- 851
Query: 140 STSRLWVWGQN------QGSN----------FPRLFWGAFTPNTIICQVSCGSVHVVALS 183
+ W WG N G+N +PR A T I QVS G+ H + +
Sbjct: 852 TKGNTWSWGWNWFGQLGNGNNIDSAIPVPVQYPR---DAGTVRAI--QVSAGADHSLIID 906
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
G AWG+N+ G+LG G + + G K+ + A + I QVS G YHS A+
Sbjct: 907 TKGNTWAWGWNQLGELGNGSSSADA---NPVPGMVKYPENAGTVTAI-QVSAGGYHSLAI 962
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+NG + WG G+LG + + L + + V+ GG HS + +G
Sbjct: 963 DKNGNAWAWGGNDSGELGIGTTSKSEIPALVQYPKNAGAVTTVQVSAGGYHSLGIDKEGK 1022
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIP 328
+AWG +Q GQLG G T S S IP
Sbjct: 1023 TWAWGYNQFGQLGNG--TISNSSIP 1045
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 114/265 (43%), Gaps = 40/265 (15%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPK--QLPPELFGCPAGANSRWLDIACGHEHTAA 76
A+ I+ WG+N G+ G G IP Q P + A + ++ G HTAA
Sbjct: 797 ARGNIWAWGFNQFGELG-NGNNINSAIPTLAQYPRDAGTVTA------IQVSGGFHHTAA 849
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSE-FVKSI--SCGAHCTAAIAEPR 133
+ + G ++WG N FGQLG+G P V+ + V++I S GA + I
Sbjct: 850 IDTKGNTWSWGWNWFGQLGNGNNIDSAIPVPVQYPRDAGTVRAIQVSAGADHSLIID--- 906
Query: 134 ENDGTISTSRLWVWGQNQ------------GSNFPRLFWGAFTPNTIIC-QVSCGSVHVV 180
+ W WG NQ + P + T+ QVS G H +
Sbjct: 907 ------TKGNTWAWGWNQLGELGNGSSSADANPVPGMVKYPENAGTVTAIQVSAGGYHSL 960
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
A+ + G AWG N+ G+LG G T + I ++ A + + QVS G YHS
Sbjct: 961 AIDKNGNAWAWGGNDSGELGIGTTSK-----SEIPALVQYPKNAGAVTTV-QVSAGGYHS 1014
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSL 265
+ + G+ + WG GQLG+ ++
Sbjct: 1015 LGIDKEGKTWAWGYNQFGQLGNGTI 1039
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 24 YVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTL 83
+ WG N SG+ G G + IP + + AGA + + ++ G H+ + +G
Sbjct: 969 WAWGGNDSGELG-IGTTSKSEIPALV---QYPKNAGAVTT-VQVSAGGYHSLGIDKEGKT 1023
Query: 84 FTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
+ WG N+FGQLG+GT P V S+ + S++
Sbjct: 1024 WAWGYNQFGQLGNGTISNSSIPTPVAFNLSQVISSVT 1060
>gi|297673957|ref|XP_002815007.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Pongo abelii]
Length = 1050
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 153/312 (49%), Gaps = 52/312 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G ER+ P+Q+ A A+ + +ACG H+ A++ G
Sbjct: 55 VYTCGLNTKGQLGH---EREGNKPEQIG-------ALADQHIIHVACGESHSLALSDRGQ 104
Query: 83 LFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
LF+WGA GQLG TE+ P +++L + + +SCG HC A +DG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLAL-----ASDG--- 156
Query: 141 TSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
+ + WG+N G FP +P + + QV+ G H ALS G
Sbjct: 157 --QFFTWGKNSHGQLGLGKEFP----SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ WG N GQLG + R + K L +K+ +SCGE H+A ++++G
Sbjct: 211 VFGWGMNNAGQLGLSD-----EKDRESPCHVKLL----RTQKVVYISCGEEHTAVLTKSG 261
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYA 306
V+T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG H+ A S G +YA
Sbjct: 262 GVFTFGAGSYGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 307 WGGSQAGQLGLG 318
+G GQLG G
Sbjct: 319 FGCGARGQLGTG 330
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 162/341 (47%), Gaps = 32/341 (9%)
Query: 83 LFTWGANEFGQLGDGTE-EG-RKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG GQ G T +G P+ + VK ++CG + + + E DG +
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLE----DGEVY 56
Query: 141 TSRLWVWGQ---NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T L GQ + N P GA II V+CG H +ALS+ G L +WG G
Sbjct: 57 TCGLNTKGQLGHEREGNKPEQI-GALADQHII-HVACGESHSLALSDRGQLFSWGAGSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG T + + PR+I+ + + I QVSCG +H A++ +G+ +TWG S
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQ--------QTILQVSCGNWHCLALASDGQFFTWGKNSH 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG + + P+RV +L+GI + VA GG HS AL+ GA++ WG + AGQLGL
Sbjct: 167 GQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+ ES + + L+ V ++CG HT V + G + +G SYGQ
Sbjct: 225 SDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQL 274
Query: 378 ANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
++ P V +G EV ++A G H+ + L
Sbjct: 275 GHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 108/252 (42%), Gaps = 35/252 (13%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+ ++ WG GQ G E + +P+ + L ++CG+ H A+AS
Sbjct: 102 RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL-------NQQTILQVSCGNWHCLALAS 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG FTWG N GQLG G E + P++V+ L+ + ++ G + A++
Sbjct: 155 DGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-------- 206
Query: 139 ISTSRLWVWGQNQGSNF--------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
+ ++ WG N + +SCG H L++ G +
Sbjct: 207 -LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFT 265
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEV 249
+G YGQLG + + RV++ ++TQ++CG H+ A V +G +
Sbjct: 266 FGAGSYGQLGHDSMNDEVNPRRVLELMGS---------EVTQIACGRQHTLAFVPSSGLI 316
Query: 250 YTWGLGSVGQLG 261
Y +G G+ GQLG
Sbjct: 317 YAFGCGARGQLG 328
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 96/206 (46%), Gaps = 30/206 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPE----LFGCPAGANSRWLDIACGHEHTAAVA 78
+ WG N GQ G G+E P Q P+ L G P +A G H+ A++
Sbjct: 158 FFTWGKNSHGQLGL-GKE----FPSQASPQRVRSLEGIPLA------QVAAGGAHSFALS 206
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
G +F WG N GQLG E+ R+ P VK L+++ V ISCG TA + + G
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK----SGG 262
Query: 139 ISTSRLWVWGQ------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAW 191
+ T +GQ N N PR + + Q++CG H +A + GL+ A+
Sbjct: 263 VFTFGAGSYGQLGHDSMNDEVN-PRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGY 217
G GQLG G TC ++ P +KGY
Sbjct: 320 GCGARGQLGTGHTC-NVKCPSPVKGY 344
>gi|145594878|ref|YP_001159175.1| cell wall anchor domain-containing protein [Salinispora tropica
CNB-440]
gi|145304215|gb|ABP54797.1| LPXTG-motif cell wall anchor domain [Salinispora tropica CNB-440]
Length = 551
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 142/452 (31%), Positives = 189/452 (41%), Gaps = 75/452 (16%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A I WG N GQ G G R P +P L P G + IA H+ A+
Sbjct: 53 ATDTILAWGDNSFGQFG-NGTTASSRTP--VPVRL---PVG--TTVTAIAGSDTHSLALT 104
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
S GT+ WG N FGQLGDGT + P V+ V +I+ G + AI
Sbjct: 105 SVGTVLAWGGNSFGQLGDGTTASSRTPVPVRLPVGTTVTAIAAGTSHSLAI--------- 155
Query: 139 ISTSRLWVWGQN----------QGSNFP---RLFWGAFTPNTIICQVSCGSVHVVALSEC 185
+T ++ WG N S+ P RL G T + ++ G H +A++
Sbjct: 156 TATGAVFAWGDNAVGQLGDGTTTDSSLPVPVRLPVG-----TTVTAIAGGLGHSLAVAST 210
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G AWG N +GQLG G T G P + P+L +T V+ G+ HS A++
Sbjct: 211 GATLAWGSNAFGQLGDG-TTTGSSTPITV----------PQLPTVTAVAAGDVHSLALTS 259
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
G VY WG S GQLG S S + RV A G V G HS ALT+ G
Sbjct: 260 TGTVYAWGANSFGQLGDGS-TSDSSTPIAVRVPA--GTTATAVVSGADHSLALTAAGGAL 316
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQL--VACGHSHTLVYMR 362
AWG + GQLG G T + P+ V VP G L VA H +
Sbjct: 317 AWGDNGQGQLGNG-------------ATVGSSTPVAVRVPGGATLTAVAIHRDHAVAVTS 363
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADACSLKELC 421
W N+ GQ N +T + P V G + +A G HS L DA +
Sbjct: 364 TATALAWSRNNEGQLGNGTTTDSSEPVAVSLPAGTAITAVAVGDDHSLALVDAQA-TSTT 422
Query: 422 EFRLA-------ESVTLSNASEIEDVASRTGS 446
R++ + VTL+ A+ D+A+ TGS
Sbjct: 423 TLRISPPDPTVDQEVTLT-ATVSCDIAAPTGS 453
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 124/294 (42%), Gaps = 47/294 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTA 75
I A A++ WG N GQ G + L +P +LP + IA G H+
Sbjct: 155 ITATGAVFAWGDNAVGQLGDGTTTDSSLPVPVRLP---------VGTTVTAIAGGLGHSL 205
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
AVAS G WG+N FGQLGDGT G P V QL + V +++ G + A+
Sbjct: 206 AVASTGATLAWGSNAFGQLGDGTTTGSSTPITVPQLPT--VTAVAAGDVHSLAL------ 257
Query: 136 DGTISTSRLWVWGQNQGSNFPRLFWGAF----TP-------NTIICQVSCGSVHVVALSE 184
ST ++ WG N +F +L G+ TP T V G+ H +AL+
Sbjct: 258 ---TSTGTVYAWGAN---SFGQLGDGSTSDSSTPIAVRVPAGTTATAVVSGADHSLALTA 311
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G AWG N GQLG G T G P ++ P +T V+ H+ AV+
Sbjct: 312 AGGALAWGDNGQGQLGNGATV-GSSTPVAVR--------VPGGATLTAVAIHRDHAVAVT 362
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
W + GQLG+ + + P V G I VA G HS AL
Sbjct: 363 STATALAWSRNNEGQLGNGTTTDSSE---PVAVSLPAGTAITAVAVGDDHSLAL 413
>gi|148223431|ref|NP_001085755.1| HECT and RLD domain containing E3 ubiquitin protein ligase family
member 6 [Xenopus laevis]
gi|49115314|gb|AAH73297.1| MGC80684 protein [Xenopus laevis]
Length = 1028
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 162/338 (47%), Gaps = 27/338 (7%)
Query: 83 LFTWGANEFGQLGDGTEEGRK-HPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDGTIS 140
++ WG N FGQL EE H ++ Q E V+ +S G + + + DGT+
Sbjct: 1 MYCWGDNCFGQLAVLEEEKEVVHFKENDYFQKKESVQKVSIGEKHSLYLLK----DGTLL 56
Query: 141 TSRLWVWGQ--NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQ 198
+ +GQ +G+N R+ + I VSCG+ H VA+ + G + +WG GQ
Sbjct: 57 SCGQNPYGQLGRKGNN-SRIEQISSLEAQTIVDVSCGTNHSVAMCDEGNIYSWGDGSEGQ 115
Query: 199 LGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVG 258
LG G P+ I G KI Q+SCG +HS A++E+G V++WG G
Sbjct: 116 LGTGKFSSKNFTPKRITGLLN--------RKIIQISCGNFHSVALAEDGRVFSWGQNKCG 167
Query: 259 QLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLG 318
QLG S + P+ V +L GI + V GG + AL+ G ++AWG + AGQLG
Sbjct: 168 QLGLGS--QIINQATPQLVKSLKGIPLVQVTAGGSQTFALSMSGTVFAWGRNNAGQLGFK 225
Query: 319 PQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
+ + P D+ R++ GV ++CG HT V +DG ++ +G ++YGQ
Sbjct: 226 NDAKKGTFKPYAVDS-LRDL-------GVAYISCGEEHTAVLNKDGIVYTFGDDTYGQLG 277
Query: 379 NEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACS 416
+ P ++ +V ++A G H+ + C+
Sbjct: 278 QQSGNQTSVPQKIEEYSRQVSQVACGRYHTLLYVFTCN 315
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 173/370 (46%), Gaps = 45/370 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG N GQ E+++ K+ + F ++ G +H+ + DGT
Sbjct: 1 MYCWGDNCFGQLAVLEEEKEVVHFKE--NDYFQKKESVQK----VSIGEKHSLYLLKDGT 54
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE-------N 135
L + G N +GQLG R E++ L+++ + +SCG + + A+ + +
Sbjct: 55 LLSCGQNPYGQLGRKGNNSR--IEQISSLEAQTIVDVSCGTNHSVAMCDEGNIYSWGDGS 112
Query: 136 DGTISTSRLWVWGQNQGSNF-PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
+G + T G+ NF P+ G N I Q+SCG+ H VAL+E G + +WG N
Sbjct: 113 EGQLGT------GKFSSKNFTPKRITGLL--NRKIIQISCGNFHSVALAEDGRVFSWGQN 164
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+ GQLG G P+++K L P + QV+ G + A+S +G V+ WG
Sbjct: 165 KCGQLGLGSQIINQATPQLVKS----LKGIP----LVQVTAGGSQTFALSMSGTVFAWGR 216
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ GQLG + + P V +L + + ++CG H+ L G +Y +G GQ
Sbjct: 217 NNAGQLGFKN-DAKKGTFKPYAVDSLRDLGVAYISCGEEHTAVLNKDGIVYTFGDDTYGQ 275
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD-GRIHGWGYNS 373
LG Q+ + + +P + + Y R V VACG HTL+Y+ RI +G S
Sbjct: 276 --LGQQSGNQTSVPQKIEEYSRQ---------VSQVACGRYHTLLYVFTCNRIVSFGKGS 324
Query: 374 YGQAANEKST 383
Q N++S+
Sbjct: 325 QRQQGNDESS 334
>gi|91202557|emb|CAJ72196.1| hypothetical protein kustd1451 [Candidatus Kuenenia
stuttgartiensis]
Length = 1413
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 117/367 (31%), Positives = 169/367 (46%), Gaps = 67/367 (18%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A++ WG N +GQ G + + P ++ G + + IA G HT A+ SDG
Sbjct: 163 AVWTWGANWNGQLGDESTTN-----RSTPVQVSGL-----TDVIAIAGGAYHTIALKSDG 212
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
T++ WG NE GQLGDG+ R P +V L V +I+ G T A+ ++DGT+
Sbjct: 213 TVWAWGNNEGGQLGDGSTTDRSTPVQVSGLTD--VIAIAGGYAHTIAL----KSDGTV-- 264
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPNTI---------ICQVSCGSVHVVALSECGLLQAWG 192
W WG N+G RL G+ T +I + ++ G+ H +AL G + AWG
Sbjct: 265 ---WAWGDNEGG---RLGDGSTTNRSIPVKVGGLSDVIAIAGGNAHTIALKSDGTVWAWG 318
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
NE GQLG G T P + G L + ++ G H+ + +G V+TW
Sbjct: 319 DNEGGQLGDGSTTN-RSTPVKVSG----------LADVIAIAGGYSHTIVLRSDGTVWTW 367
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G GQLG S P +V L + +A G H+ A+ S G ++AWG +
Sbjct: 368 GHNEGGQLGDGSTT---NRSTPVQVSGLADVIA--IAGGVYHTIAVKSDGTMWAWGYNWY 422
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG---VQLVACGHSHTLVYMRDGRIHGW 369
GQLG G S + P+ V NG V +A G+ HT+ DG + W
Sbjct: 423 GQLGDGTTINS-------------STPVQV--NGLTDVIAIAGGYYHTIAMKSDGAVWTW 467
Query: 370 GYNSYGQ 376
G+N YGQ
Sbjct: 468 GFNYYGQ 474
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 152/325 (46%), Gaps = 53/325 (16%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
+ IA G HT A+ SDGT++TWG N GQLGDGT R P +V L V +I+ G +
Sbjct: 644 IAIAGGVYHTIALKSDGTVWTWGWNNSGQLGDGTTINRSTPVQVIGLTD--VIAIAGGDY 701
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI---------ICQVSCG 175
T A+ ++DGT+ W WG N + +L GA T + I ++ G
Sbjct: 702 HTIAL----KSDGTV-----WTWGFNY---YGQLGGGATTNRSTPVQVKGLADIIAIAGG 749
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
VH +AL G + AWGYN YGQLG G T + L P + G L I ++
Sbjct: 750 YVHSIALKSDGTVWAWGYNGYGQLGDGSTTDHLT-PVQVSG----------LTDIIAIAG 798
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
G H+ A+ +G V+ WG GQLG + + P +V L + V H+
Sbjct: 799 GYIHTIALKSDGTVWAWGHNEGGQLGDGTTTNSST---PVQVSGLTDVIA--VTARLYHT 853
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGH 354
AL S G ++ WG + GQLG G T R++P+ V+ V +A G+
Sbjct: 854 IALKSDGTVWTWGRNIYGQLGDGSTTE-------------RSLPVQVIGLTDVIAIAGGY 900
Query: 355 SHTLVYMRDGRIHGWGYNSYGQAAN 379
HT+ DG + WGYN Q N
Sbjct: 901 YHTIALKSDGAVWAWGYNGNNQLGN 925
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 147/306 (48%), Gaps = 43/306 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + ++ WG+N+SGQ G I + P ++ G + + IA G HT A
Sbjct: 656 LKSDGTVWTWGWNNSGQLGDG-----TTINRSTPVQVIGL-----TDVIAIAGGDYHTIA 705
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ SDGT++TWG N +GQLG G R P +VK L + +I+ G + A+ ++D
Sbjct: 706 LKSDGTVWTWGFNYYGQLGGGATTNRSTPVQVKGLAD--IIAIAGGYVHSIAL----KSD 759
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
GT+ W WG N GS L + T I ++ G +H +AL G + A
Sbjct: 760 GTV-----WAWGYNGYGQLGDGSTTDHLTPVQVSGLTDIIAIAGGYIHTIALKSDGTVWA 814
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG+NE GQLG G T P + G L + V+ YH+ A+ +G V+
Sbjct: 815 WGHNEGGQLGDGTTTNS-STPVQVSG----------LTDVIAVTARLYHTIALKSDGTVW 863
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
TWG GQLG S + LP +V+ L + +A G H+ AL S GA++AWG +
Sbjct: 864 TWGRNIYGQLGDGSTT---ERSLPVQVIGLTDVIA--IAGGYYHTIALKSDGAVWAWGYN 918
Query: 311 QAGQLG 316
QLG
Sbjct: 919 GNNQLG 924
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/322 (34%), Positives = 149/322 (46%), Gaps = 53/322 (16%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
+ IA G HT A+ SD T++ WG+N +GQLGDGT R P V L + + +I+ G
Sbjct: 1092 IAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDGTITNRSIPTPVTYLTN--IIAIAGGYV 1149
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGS-------- 176
T A+ ++DGT+ W WG N + +L G+ T + QVS +
Sbjct: 1150 HTIAL----KSDGTV-----WAWGYN---GYGQLGDGSTTNRSTPVQVSGLTDVIAIAGE 1197
Query: 177 -VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
VH VAL G + AWGYN YGQLG G T P + G L + ++
Sbjct: 1198 YVHTVALKSDGTVWAWGYNGYGQLGDGSTTN-RSTPVQVSG----------LTDVIAIAG 1246
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL-DGIFIKDVACGGVH 294
G H+ A+ +G V+TWG + GQLG + L P +V L D I I A G H
Sbjct: 1247 GYVHTIALKSDGTVWTWGWNNSGQLGDGTTI---NRLTPVQVSGLTDAIAI---AGGDYH 1300
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGH 354
+ AL S ++AWG + GQLG G T L P + I I A G
Sbjct: 1301 TIALKSDNTVWAWGSNSYGQLGDG--TTINRLTPVQVSGLTDAIAI----------AGGD 1348
Query: 355 SHTLVYMRDGRIHGWGYNSYGQ 376
HT+ D + WG NSYGQ
Sbjct: 1349 YHTIALKSDNTVWAWGSNSYGQ 1370
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 154/353 (43%), Gaps = 50/353 (14%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
I+ G HT + DGT++ +GAN QLGDG+ P +V L +I+ G + T
Sbjct: 596 ISAGAYHTLTLKPDGTVWAYGANWNSQLGDGSTTDSSTPVQVSGLTDAI--AIAGGVYHT 653
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVV 180
A+ ++DGT+ W WG N G+ R T + ++ G H +
Sbjct: 654 IAL----KSDGTV-----WTWGWNNSGQLGDGTTINRSTPVQVIGLTDVIAIAGGDYHTI 704
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
AL G + WG+N YGQLG G T P +KG L I ++ G HS
Sbjct: 705 ALKSDGTVWTWGFNYYGQLGGGATTN-RSTPVQVKG----------LADIIAIAGGYVHS 753
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
A+ +G V+ WG GQLG S L P +V L I +A G +H+ AL S
Sbjct: 754 IALKSDGTVWAWGYNGYGQLGDGSTT---DHLTPVQVSGLTDIIA--IAGGYIHTIALKS 808
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLV 359
G ++AWG ++ GQLG G T S + P+ V V V HT+
Sbjct: 809 DGTVWAWGHNEGGQLGDGTTTNS-------------STPVQVSGLTDVIAVTARLYHTIA 855
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
DG + WG N YGQ + +T P V +G +A GG+ +A
Sbjct: 856 LKSDGTVWTWGRNIYGQLGDGSTTERSLPVQV---IGLTDVIAIAGGYYHTIA 905
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/320 (33%), Positives = 144/320 (45%), Gaps = 53/320 (16%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
I+ G HT + DGT++ GAN GQLGDGT R P +V L V +I+ G + T
Sbjct: 1044 ISAGAYHTLTLKPDGTVWACGANWNGQLGDGTTINRSTPVQVSGLTD--VIAIAGGDYHT 1101
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI---------ICQVSCGSV 177
A+ ++D T+ W WG N ++ +L G T +I I ++ G V
Sbjct: 1102 IAL----KSDNTV-----WAWGSN---SYGQLGDGTITNRSIPTPVTYLTNIIAIAGGYV 1149
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H +AL G + AWGYN YGQLG G T P + G + A GE
Sbjct: 1150 HTIALKSDGTVWAWGYNGYGQLGDGSTTN-RSTPVQVSGLTDVIAIA-----------GE 1197
Query: 238 Y-HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSC 296
Y H+ A+ +G V+ WG GQLG S P +V L + +A G VH+
Sbjct: 1198 YVHTVALKSDGTVWAWGYNGYGQLGDGSTT---NRSTPVQVSGLTDVIA--IAGGYVHTI 1252
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
AL S G ++ WG + +GQLG G T L P + I I A G H
Sbjct: 1253 ALKSDGTVWTWGWNNSGQLGDG--TTINRLTPVQVSGLTDAIAI----------AGGDYH 1300
Query: 357 TLVYMRDGRIHGWGYNSYGQ 376
T+ D + WG NSYGQ
Sbjct: 1301 TIALKSDNTVWAWGSNSYGQ 1320
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 157/356 (44%), Gaps = 56/356 (15%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
I+ G HT + DG ++TWGAN GQLGD + R P +V L V +I+ GA+ T
Sbjct: 148 ISAGAYHTLTLKPDGAVWTWGANWNGQLGDESTTNRSTPVQVSGLTD--VIAIAGGAYHT 205
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVS---------CGSV 177
A+ ++DGT+ W WG N+G G+ T + QVS G
Sbjct: 206 IAL----KSDGTV-----WAWGNNEGGQLGD---GSTTDRSTPVQVSGLTDVIAIAGGYA 253
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H +AL G + AWG NE G+LG G T P + G L + ++ G
Sbjct: 254 HTIALKSDGTVWAWGDNEGGRLGDGSTTN-RSIPVKVGG----------LSDVIAIAGGN 302
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
H+ A+ +G V+ WG GQLG S P +V L + +A G H+
Sbjct: 303 AHTIALKSDGTVWAWGDNEGGQLGDGSTT---NRSTPVKVSGLADVIA--IAGGYSHTIV 357
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSH 356
L S G ++ WG ++ GQLG G T R+ P+ V V +A G H
Sbjct: 358 LRSDGTVWTWGHNEGGQLGDGSTTN-------------RSTPVQVSGLADVIAIAGGVYH 404
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
T+ DG + WGYN YGQ + + + P V+ G +A GG+ +A
Sbjct: 405 TIAVKSDGTMWAWGYNWYGQLGDGTTINSSTPVQVN---GLTDVIAIAGGYYHTIA 457
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/440 (25%), Positives = 184/440 (41%), Gaps = 86/440 (19%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + ++ WGYN GQ G I P ++ G + + IA G+ HT A
Sbjct: 408 VKSDGTMWAWGYNWYGQLGDG-----TTINSSTPVQVNGL-----TDVIAIAGGYYHTIA 457
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEK--VKQLQSEFVKSISCG-AHC---TAAIA 130
+ SDG ++TWG N +GQLGDG+ R P + + ++S +++ G A C ++A+
Sbjct: 458 MKSDGAVWTWGFNYYGQLGDGSITNRSTPAQRSLSGMKSVATPTVTTGSATCVSLSSALL 517
Query: 131 EPRENDGTISTSRLWVWGQNQG-------------------------------------S 153
N ++T+ + +G + G
Sbjct: 518 NGWVNGNGVATTAWFDYGTSTGMYFDATKTISCGTGSTYVGATLGDLTPWTTYYCRIASQ 577
Query: 154 NFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV 213
N +++G+ T Q+S G+ H + L G + A+G N QLG G T + P
Sbjct: 578 NIGGIYYGSETTFMPRTQISAGAYHTLTLKPDGTVWAYGANWNSQLGDGSTTDS-STPVQ 636
Query: 214 IKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL 273
+ G L ++ G YH+ A+ +G V+TWG + GQLG +
Sbjct: 637 VSG----------LTDAIAIAGGVYHTIALKSDGTVWTWGWNNSGQLGDGTTI---NRST 683
Query: 274 PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDT 333
P +V+ L + +A G H+ AL S G ++ WG + GQLG G T
Sbjct: 684 PVQVIGLTDVIA--IAGGDYHTIALKSDGTVWTWGFNYYGQLGGGATTN----------- 730
Query: 334 YFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVD 392
R+ P+ V + +A G+ H++ DG + WGYN YGQ + +T P V
Sbjct: 731 --RSTPVQVKGLADIIAIAGGYVHSIALKSDGTVWAWGYNGYGQLGDGSTTDHLTPVQVS 788
Query: 393 WCVGEVRKLAAGGGHSAVLA 412
G +A GG+ +A
Sbjct: 789 ---GLTDIIAIAGGYIHTIA 805
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/313 (30%), Positives = 139/313 (44%), Gaps = 57/313 (18%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + + ++ WG N GQ G G IP P + + IA G+ HT A
Sbjct: 1104 LKSDNTVWAWGSNSYGQLG-DGTITNRSIP---------TPVTYLTNIIAIAGGYVHTIA 1153
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS------EFVKSISCGAHCTAAIA 130
+ SDGT++ WG N +GQLGDG+ R P +V L E+V +++
Sbjct: 1154 LKSDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTDVIAIAGEYVHTVAL--------- 1204
Query: 131 EPRENDGTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
++DGT+ W WG N GS R + T + ++ G VH +AL
Sbjct: 1205 ---KSDGTV-----WAWGYNGYGQLGDGSTTNRSTPVQVSGLTDVIAIAGGYVHTIALKS 1256
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G + WG+N GQLG G T L P + G L ++ G+YH+ A+
Sbjct: 1257 DGTVWTWGWNNSGQLGDGTTINRLT-PVQVSG----------LTDAIAIAGGDYHTIALK 1305
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL-DGIFIKDVACGGVHSCALTSKGA 303
+ V+ WG S GQLG + L P +V L D I I A G H+ AL S
Sbjct: 1306 SDNTVWAWGSNSYGQLGDGTTI---NRLTPVQVSGLTDAIAI---AGGDYHTIALKSDNT 1359
Query: 304 LYAWGGSQAGQLG 316
++AWG + GQLG
Sbjct: 1360 VWAWGSNSYGQLG 1372
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 147/341 (43%), Gaps = 58/341 (17%)
Query: 3 INEIIGETARPVDNIPAKS--AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA 60
+ ++I I KS ++ WG N GQ G G P Q+
Sbjct: 192 LTDVIAIAGGAYHTIALKSDGTVWAWGNNEGGQLG-DGSTTDRSTPVQVS---------G 241
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
+ + IA G+ HT A+ SDGT++ WG NE G+LGDG+ R P KV L S+ +
Sbjct: 242 LTDVIAIAGGYAHTIALKSDGTVWAWGDNEGGRLGDGSTTNRSIPVKVGGL-SDVIAIAG 300
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVS------- 173
AH A ++DGT+ W WG N+G G+ T + +VS
Sbjct: 301 GNAHTIA-----LKSDGTV-----WAWGDNEGGQLGD---GSTTNRSTPVKVSGLADVIA 347
Query: 174 --CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
G H + L G + WG+NE GQLG G T P + G L +
Sbjct: 348 IAGGYSHTIVLRSDGTVWTWGHNEGGQLGDGSTTN-RSTPVQVSG----------LADVI 396
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
++ G YH+ AV +G ++ WG GQLG + + P +V L + +A G
Sbjct: 397 AIAGGVYHTIAVKSDGTMWAWGYNWYGQLGDGTTINSST---PVQVNGLTDVIA--IAGG 451
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLG-------PQTRSFS 325
H+ A+ S GA++ WG + GQLG G P RS S
Sbjct: 452 YYHTIAMKSDGAVWTWGFNYYGQLGDGSITNRSTPAQRSLS 492
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 120/456 (26%), Positives = 184/456 (40%), Gaps = 88/456 (19%)
Query: 3 INEIIGETARPVDNIPAKS--AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA 60
+ ++I TAR I KS ++ WG N GQ G + LP ++ G
Sbjct: 840 LTDVIAVTARLYHTIALKSDGTVWTWGRNIYGQLGDGSTTE-----RSLPVQVIGL---- 890
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQ--LQSEFVKS 118
+ + IA G+ HT A+ SDG ++ WG N QLG+ + + P + + + S +
Sbjct: 891 -TDVIAIAGGYYHTIALKSDGAVWAWGYNGNNQLGNWSTKNSSTPVRSLRYDMNSVTTPA 949
Query: 119 ISCGAHCTAAIAEPREN---DGTISTSRLWV-WGQNQG--------------SNFPRLFW 160
+ G+ +++ N DG + + W +G + G S +
Sbjct: 950 VITGSTTCVSLSSVLLNGWVDGNRAATTAWFDYGTSSGVYFDTTATIPCGTSSAYISATL 1009
Query: 161 GAFTPNTII-----------------------CQVSCGSVHVVALSECGLLQAWGYNEYG 197
G+ TP T Q+S G+ H + L G + A G N G
Sbjct: 1010 GSLTPWTTYYYRIAAQNSRGISYGSETIFLPRSQISAGAYHTLTLKPDGTVWACGANWNG 1069
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG G T P + G L + ++ G+YH+ A+ + V+ WG S
Sbjct: 1070 QLGDGTTIN-RSTPVQVSG----------LTDVIAIAGGDYHTIALKSDNTVWAWGSNSY 1118
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG ++ +P V L I +A G VH+ AL S G ++AWG + GQLG
Sbjct: 1119 GQLGDGTIT---NRSIPTPVTYLTNIIA--IAGGYVHTIALKSDGTVWAWGYNGYGQLGD 1173
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
G T R+ P+ V V +A + HT+ DG + WGYN YGQ
Sbjct: 1174 GSTTN-------------RSTPVQVSGLTDVIAIAGEYVHTVALKSDGTVWAWGYNGYGQ 1220
Query: 377 AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
+ +T P V G +A GG+ +A
Sbjct: 1221 LGDGSTTNRSTPVQVS---GLTDVIAIAGGYVHTIA 1253
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 135/310 (43%), Gaps = 49/310 (15%)
Query: 2 DINEIIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGAN 61
D+ I G A + + + ++ WG N G+ G G IP ++ G
Sbjct: 244 DVIAIAGGYAHTI-ALKSDGTVWAWGDNEGGRLG-DGSTTNRSIPVKV---------GGL 292
Query: 62 SRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC 121
S + IA G+ HT A+ SDGT++ WG NE GQLGDG+ R P KV L V +I+
Sbjct: 293 SDVIAIAGGNAHTIALKSDGTVWAWGDNEGGQLGDGSTTNRSTPVKVSGLAD--VIAIAG 350
Query: 122 GAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVS-------- 173
G T + +DGT+ W WG N+G G+ T + QVS
Sbjct: 351 GYSHTIVL----RSDGTV-----WTWGHNEGGQLGD---GSTTNRSTPVQVSGLADVIAI 398
Query: 174 -CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
G H +A+ G + AWGYN YGQLG G T P + G L +
Sbjct: 399 AGGVYHTIAVKSDGTMWAWGYNWYGQLGDGTTINS-STPVQVNG----------LTDVIA 447
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQS----GDKELLPRRVVALDGIFIKDV 288
++ G YH+ A+ +G V+TWG GQLG S+ + + L + VA +
Sbjct: 448 IAGGYYHTIAMKSDGAVWTWGFNYYGQLGDGSITNRSTPAQRSLSGMKSVATPTVTTGSA 507
Query: 289 ACGGVHSCAL 298
C + S L
Sbjct: 508 TCVSLSSALL 517
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 110/243 (45%), Gaps = 31/243 (12%)
Query: 170 CQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK 229
Q+S G+ H + L G + WG N GQLG T P + G L
Sbjct: 146 SQISAGAYHTLTLKPDGAVWTWGANWNGQLGDESTTN-RSTPVQVSG----------LTD 194
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ ++ G YH+ A+ +G V+ WG GQLG S D+ P +V L + +A
Sbjct: 195 VIAIAGGAYHTIALKSDGTVWAWGNNEGGQLGDGSTT--DRS-TPVQVSGLTDVIA--IA 249
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQ 348
G H+ AL S G ++AWG ++ G+LG G T R+IP+ V + V
Sbjct: 250 GGYAHTIALKSDGTVWAWGDNEGGRLGDGSTTN-------------RSIPVKVGGLSDVI 296
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
+A G++HT+ DG + WG N GQ + +T P V + +V +A G H+
Sbjct: 297 AIAGGNAHTIALKSDGTVWAWGDNEGGQLGDGSTTNRSTPVKVS-GLADVIAIAGGYSHT 355
Query: 409 AVL 411
VL
Sbjct: 356 IVL 358
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 96/213 (45%), Gaps = 28/213 (13%)
Query: 2 DINEIIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGAN 61
D+ I GE V + + ++ WGYN GQ G + P ++ G
Sbjct: 1190 DVIAIAGEYVHTV-ALKSDGTVWAWGYNGYGQLGDGSTTN-----RSTPVQVSGL----- 1238
Query: 62 SRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC 121
+ + IA G+ HT A+ SDGT++TWG N GQLGDGT R P +V L +I+
Sbjct: 1239 TDVIAIAGGYVHTIALKSDGTVWTWGWNNSGQLGDGTTINRLTPVQVSGLTDAI--AIAG 1296
Query: 122 GAHCTAAIAEPRENDGTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCG 175
G + T A+ ++D T+ W WG N G+ RL + T ++ G
Sbjct: 1297 GDYHTIAL----KSDNTV-----WAWGSNSYGQLGDGTTINRLTPVQVSGLTDAIAIAGG 1347
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGL 208
H +AL + AWG N YGQLG T L
Sbjct: 1348 DYHTIALKSDNTVWAWGSNSYGQLGDVSTANSL 1380
>gi|410900470|ref|XP_003963719.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Takifugu rubripes]
Length = 1042
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 171/375 (45%), Gaps = 46/375 (12%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ I P++ C + D+ CG +HT + DGT++
Sbjct: 4 WGNASYGQLGLGGIDEEIVIEPRK-------CEFFHGKKVCDVGCGLKHTVFLLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRL 144
T G N+ GQLG E+ RK PE V L ++ + ++S G T A+ + G I + L
Sbjct: 57 TCGCNDLGQLGH--EKPRKKPEHVVALDAQIIVAVSGGESHTLAL----NDKGQIFSWGL 110
Query: 145 WVWGQNQGSNFPRLFWGAFTPNTIIC-------QVSCGSVHVVALSECGLLQAWGYNEYG 197
GQ +NF P I C QV+CG H ALS+ G + +WG N++G
Sbjct: 111 GSDGQLGLNNFEEC---VRVPRNIKCLSDVQIAQVACGYRHSHALSKGGQVFSWGQNQFG 167
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG G+ + P++I+ L P Q+S G HS A++ +G V+ WG
Sbjct: 168 QLGLGMHGSSISTPQIIQS----LQGIP----FAQLSAGGAHSFAITLSGAVFGWGRNKF 219
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG L + P + +L + V+CG H+ ALT +G ++ +G GQLG
Sbjct: 220 GQLG---LNDTNDRWFPALLKSLRSQRVIYVSCGEDHTAALTKEGGVFTFGAGGYGQLGH 276
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ 376
+ P + NI V ++CG HTL + G+++ +G GQ
Sbjct: 277 NSTNHEIN--PRKVFELMGNI--------VTQISCGRQHTLAFTPSSGKMYSFGLGGNGQ 326
Query: 377 AANEKSTYAWYPSPV 391
+ P+PV
Sbjct: 327 LGTRSTCNRKSPAPV 341
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 121/245 (49%), Gaps = 23/245 (9%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+C V CG H V L + G + G N+ GQLG + PR + LD +
Sbjct: 36 VCDVGCGLKHTVFLLDDGTVYTCGCNDLGQLGH-------EKPRKKPEHVVALDA----Q 84
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
I VS GE H+ A+++ G++++WGLGS GQLG + + + +PR + L + I V
Sbjct: 85 IIVAVSGGESHTLALNDKGQIFSWGLGSDGQLGLNNFEECVR--VPRNIKCLSDVQIAQV 142
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
ACG HS AL+ G +++WG +Q GQLGLG S S P + + IP Q
Sbjct: 143 ACGYRHSHALSKGGQVFSWGQNQFGQLGLGMHGSSIS-TPQIIQS-LQGIPF------AQ 194
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGH 407
L A G +H+ G + GWG N +GQ + W+P+ + + V ++ G H
Sbjct: 195 LSAGG-AHSFAITLSGAVFGWGRNKFGQLGLNDTNDRWFPALLKSLRSQRVIYVSCGEDH 253
Query: 408 SAVLA 412
+A L
Sbjct: 254 TAALT 258
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 120/254 (47%), Gaps = 39/254 (15%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K I+ WG GQ G E +R+P+ + ++ + +ACG+ H+ A++
Sbjct: 102 KGQIFSWGLGSDGQLGLNNFEECVRVPRNI-------KCLSDVQIAQVACGYRHSHALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
G +F+WG N+FGQLG G P+ ++ LQ +S G + AI T
Sbjct: 155 GGQVFSWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAI--------T 206
Query: 139 ISTSRLWVWGQNQ----GSN------FPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+S + ++ WG+N+ G N FP L + I VSCG H AL++ G +
Sbjct: 207 LSGA-VFGWGRNKFGQLGLNDTNDRWFPALLKSLRSQRVI--YVSCGEDHTAALTKEGGV 263
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS-ENG 247
+G YGQLG T + +V + +TQ+SCG H+ A + +G
Sbjct: 264 FTFGAGGYGQLGHNSTNHEINPRKVFELMGNI---------VTQISCGRQHTLAFTPSSG 314
Query: 248 EVYTWGLGSVGQLG 261
++Y++GLG GQLG
Sbjct: 315 KMYSFGLGGNGQLG 328
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 92/201 (45%), Gaps = 22/201 (10%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G + P Q+ L G P + ++ G H+ A+ G
Sbjct: 158 VFSWGQNQFGQLGLGMHGSSISTP-QIIQSLQGIP------FAQLSAGGAHSFAITLSGA 210
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F WG N+FGQLG R P +K L+S+ V +SCG TAA+ + +G + T
Sbjct: 211 VFGWGRNKFGQLGLNDTNDRWFPALLKSLRSQRVIYVSCGEDHTAALTK----EGGVFTF 266
Query: 143 RLWVWGQ------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALS-ECGLLQAWGYNE 195
+GQ N N PR + I+ Q+SCG H +A + G + ++G
Sbjct: 267 GAGGYGQLGHNSTNHEIN-PRKVFELM--GNIVTQISCGRQHTLAFTPSSGKMYSFGLGG 323
Query: 196 YGQLGRGITCEGLQGPRVIKG 216
GQLG TC + P +KG
Sbjct: 324 NGQLGTRSTCNR-KSPAPVKG 343
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 8/114 (7%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I A++ WG N GQ G + P L + + R + ++CG +HTAA
Sbjct: 205 ITLSGAVFGWGRNKFGQLGLNDTND-----RWFPALL---KSLRSQRVIYVSCGEDHTAA 256
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIA 130
+ +G +FT+GA +GQLG + +P KV +L V ISCG T A
Sbjct: 257 LTKEGGVFTFGAGGYGQLGHNSTNHEINPRKVFELMGNIVTQISCGRQHTLAFT 310
>gi|449499989|ref|XP_004174916.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC3-like [Taeniopygia guttata]
Length = 1050
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 134/460 (29%), Positives = 205/460 (44%), Gaps = 78/460 (16%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFT 85
WGY+ GQ G G Q+ IP+ P+++G N + ++ACG H+ + DG ++T
Sbjct: 4 WGYSSYGQPG-IGSNLQVIIPE---PQVYGFIHDRNVK--EVACGGNHSVFLLEDGEVYT 57
Query: 86 WGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE--NDGTISTSR 143
G N GQLG E + PE++ L + + ++CG + A+++ + + G S +
Sbjct: 58 CGLNTKGQLGHDCEGSK--PEQIGALAGQHIVHVACGESHSVALSDQGQLFSWGAGSDGQ 115
Query: 144 LWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGI 203
L + PRL TI+ QVSCG+ H +AL+ G WG N YGQLG G
Sbjct: 116 LGLTTIEDAVTVPRLI-KKLNQQTIL-QVSCGNWHCLALAADGQFFTWGQNSYGQLGLGK 173
Query: 204 TCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHC 263
C P+ +K LD P + QV+ G HS A+S +G V+ WG S GQLG
Sbjct: 174 ECPSQASPQRVKS----LDGIP----LAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLS 225
Query: 264 SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG------- 316
D+E P V L + ++CG H+ LT G ++ +G GQLG
Sbjct: 226 D--ERDRE-SPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282
Query: 317 LGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYG 375
+ P+ R L+ +E V +ACG HTL ++ G I+ +G + G
Sbjct: 283 VNPR-RVLELMGSE----------------VSQIACGRHHTLAFVPSSGMIYAFGCGTRG 325
Query: 376 QAANEKSTYAWYPSPVD--WCVGEVRKLAAGGGHSAVLADACSLKELCEFRLAESVTLSN 433
Q + PSPV W AA G + DA C++ + + +
Sbjct: 326 QLGTGHTCNVKCPSPVKGHW--------AAHNGQLSGKPDA------CKYHIVKHIF--- 368
Query: 434 ASEIEDVASRTGSEALARLCERLREHSLHGDEFDCDDDTR 473
+G + LC + E+SL D+F ++TR
Sbjct: 369 ----------SGGDQTFVLCSK-YENSLPADDFRTINETR 397
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/311 (34%), Positives = 151/311 (48%), Gaps = 50/311 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G + PE G AG + + +ACG H+ A++ G
Sbjct: 55 VYTCGLNTKGQLGHDCEGSK--------PEQIGALAGQHI--VHVACGESHSVALSDQGQ 104
Query: 83 LFTWGANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
LF+WGA GQLG T E+ P +K+L + + +SCG HC A A DG
Sbjct: 105 LFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAA-----DG--- 156
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFTPNTI------------ICQVSCGSVHVVALSECGLL 188
+ + WGQN ++ +L G P+ + QV+ G H ALS G +
Sbjct: 157 --QFFTWGQN---SYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAV 211
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG N GQLG + R + K L +K+ +SCGE H+A ++++G
Sbjct: 212 FGWGKNSSGQLGLSD-----ERDRESPCHVKLLRS----QKVVYISCGEEHTAVLTKSGG 262
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYAW 307
V+T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG H+ A S G +YA+
Sbjct: 263 VFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAF 319
Query: 308 GGSQAGQLGLG 318
G GQLG G
Sbjct: 320 GCGTRGQLGTG 330
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 162/336 (48%), Gaps = 40/336 (11%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ--LQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG + +GQ G G+ PE + VK ++CG + + + E DG +
Sbjct: 1 MLCWGYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLE----DGEVY 56
Query: 141 TSRLWVWGQN----QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
T L GQ +GS ++ GA I+ V+CG H VALS+ G L +WG
Sbjct: 57 TCGLNTKGQLGHDCEGSKPEQI--GALAGQHIV-HVACGESHSVALSDQGQLFSWGAGSD 113
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG + + PR+IK + + I QVSCG +H A++ +G+ +TWG S
Sbjct: 114 GQLGLTTIEDAVTVPRLIKKLNQ--------QTILQVSCGNWHCLALAADGQFFTWGQNS 165
Query: 257 VGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
GQLG C Q+ P+RV +LDGI + VA GG HS AL+ GA++ WG + +G
Sbjct: 166 YGQLGLGKECPSQAS-----PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSG 220
Query: 314 QLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNS 373
QLGL + ES + + L+ V ++CG HT V + G + +G S
Sbjct: 221 QLGLSDERD------RESPCHVK----LLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 374 YGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
GQ ++ P V +G EV ++A G H+
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHT 306
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 93/204 (45%), Gaps = 14/204 (6%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A + WG N GQ G G+E + Q L G P +A G H+ A
Sbjct: 152 LAADGQFFTWGQNSYGQLGL-GKECPSQASPQRVKSLDGIPLA------QVAAGGAHSFA 204
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP--RE 134
++ G +F WG N GQLG E R+ P VK L+S+ V ISCG TA + +
Sbjct: 205 LSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVF 264
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGY 193
G S +L N N PR + + Q++CG H +A + G++ A+G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVN-PRRVLELM--GSEVSQIACGRHHTLAFVPSSGMIYAFGC 321
Query: 194 NEYGQLGRGITCEGLQGPRVIKGY 217
GQLG G TC ++ P +KG+
Sbjct: 322 GTRGQLGTGHTC-NVKCPSPVKGH 344
>gi|307178981|gb|EFN67497.1| Probable E3 ubiquitin-protein ligase HERC4 [Camponotus floridanus]
Length = 1048
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 103/308 (33%), Positives = 149/308 (48%), Gaps = 48/308 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G + ++L++ L +F IACG HT AV G
Sbjct: 55 VYSCGNNDYGQLGHEKARKRLQLIPGLDAFVFK----------KIACGSCHTLAVNEWGQ 104
Query: 83 LFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
LF+WG N GQLG + + + P VK L + + I+CG + A+ NDG
Sbjct: 105 LFSWGCNMKGQLGLNSVDCTERTPRMVKALGTSVIVQIACGIEHSIALT----NDG---- 156
Query: 142 SRLWVWGQNQGSNF------------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQ 189
L+ WG N+ R+ A P I ++CG H V +S+ G++
Sbjct: 157 -ELYSWGSNREGQLGIGSHTVTEIKPKRIITLAAVP---IAFIACGGYHTVVISKSGVVF 212
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
AWG N +GQLG T + R++ + L A K+ +CGE S ++ +G V
Sbjct: 213 AWGRNTFGQLGLNDTQQ-----RIVPCQLRTLRNA----KVCYAACGEEFSVFLTLDGGV 263
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYAWG 308
+T G G GQLGH +G E+LPR+V+ L G + ++CG H+ AL S+G +YAWG
Sbjct: 264 FTCGAGMYGQLGH---GNGMNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWG 320
Query: 309 GSQAGQLG 316
AGQLG
Sbjct: 321 LGGAGQLG 328
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 119/420 (28%), Positives = 186/420 (44%), Gaps = 79/420 (18%)
Query: 23 IYVWGYNHSGQTGRKGRERQ-LRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++ WG G+ G G E + + +P+Q+ A AN IACG +T + +DG
Sbjct: 1 MFCWGSTIHGELGLGGIEDENIFMPRQVDF------AKANEVE-QIACGENYTVTITNDG 53
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+++ G N++GQLG E+ RK + + L + K I+CG+ T A+ E
Sbjct: 54 QVYSCGNNDYGQLGH--EKARKRLQLIPGLDAFVFKKIACGSCHTLAVNE---------W 102
Query: 142 SRLWVWGQNQGSNF-----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
+L+ WG N PR+ T ++I Q++CG H +AL+ G L +
Sbjct: 103 GQLFSWGCNMKGQLGLNSVDCTERTPRMVKALGT--SVIVQIACGIEHSIALTNDGELYS 160
Query: 191 WGYNEYGQLGRGI-TCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
WG N GQLG G T ++ R+I L P I ++CG YH+ +S++G V
Sbjct: 161 WGSNREGQLGIGSHTVTEIKPKRIIT-----LAAVP----IAFIACGGYHTVVISKSGVV 211
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
+ WG + GQLG L + ++P ++ L + ACG S LT G ++ G
Sbjct: 212 FAWGRNTFGQLG---LNDTQQRIVPCQLRTLRNAKVCYAACGEEFSVFLTLDGGVFTCGA 268
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHG 368
GQLG G ++P + + ++ + V ++CG HTL + GR++
Sbjct: 269 GMYGQLGHGNGMN--EILPRQV--------MELMGSTVTQISCGKRHTLALVPSRGRVYA 318
Query: 369 WGYNSYGQAANEKS---------------------TYAWYPSPVDWCVGEVRKLAAGGGH 407
WG GQ N S + Y SP CV VR + +GG H
Sbjct: 319 WGLGGAGQLGNRASRSATTPLVVLGPWSSASGSSMKFDLYHSPQIDCV--VRHIFSGGDH 376
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/334 (29%), Positives = 155/334 (46%), Gaps = 28/334 (8%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+F WG+ G+LG G +E P +V ++ V+ I+CG + T I NDG +
Sbjct: 1 MFCWGSTIHGELGLGGIEDENIFMPRQVDFAKANEVEQIACGENYTVTIT----NDGQVY 56
Query: 141 TSRLWVWGQ-NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
+ +GQ RL + +++CGS H +A++E G L +WG N GQL
Sbjct: 57 SCGNNDYGQLGHEKARKRLQLIPGLDAFVFKKIACGSCHTLAVNEWGQLFSWGCNMKGQL 116
Query: 200 GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ 259
G + PR++K + I Q++CG HS A++ +GE+Y+WG GQ
Sbjct: 117 GLNSVDCTERTPRMVKALGTSV--------IVQIACGIEHSIALTNDGELYSWGSNREGQ 168
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LG S E+ P+R++ L + I +ACGG H+ ++ G ++AWG + GQLGL
Sbjct: 169 LGIGS--HTVTEIKPKRIITLAAVPIAFIACGGYHTVVISKSGVVFAWGRNTFGQLGLND 226
Query: 320 QTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAAN 379
+ ++P + T RN + ACG ++ DG + G YGQ +
Sbjct: 227 TQQ--RIVPCQLRT-LRNAKVC-------YAACGEEFSVFLTLDGGVFTCGAGMYGQLGH 276
Query: 380 EKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
P V +G V +++ G H+ L
Sbjct: 277 GNGMNEILPRQVMELMGSTVTQISCGKRHTLALV 310
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 58/132 (43%), Gaps = 16/132 (12%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I ++ WG N GQ G ++++ +P QL N++ ACG E +
Sbjct: 205 ISKSGVVFAWGRNTFGQLGLNDTQQRI-VPCQLR-------TLRNAKVCYAACGEEFSVF 256
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +FT GA +GQLG G P +V +L V ISCG T A+ R
Sbjct: 257 LTLDGGVFTCGAGMYGQLGHGNGMNEILPRQVMELMGSTVTQISCGKRHTLALVPSR--- 313
Query: 137 GTISTSRLWVWG 148
R++ WG
Sbjct: 314 -----GRVYAWG 320
>gi|345795744|ref|XP_535653.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Canis lupus
familiaris]
Length = 1050
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 154/312 (49%), Gaps = 52/312 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G ER+ P+Q+ A A+ + +ACG H+ A++ G
Sbjct: 55 VYTCGLNTKGQLGH---EREGNKPEQIG-------ALADQHIVHVACGESHSLALSDRGQ 104
Query: 83 LFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
LF+WGA GQLG TE+ P +++L + + +SCG HC A A DG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA-----DG--- 156
Query: 141 TSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
+ + WG+N G +P +P + + QV+ G H ALS G
Sbjct: 157 --QFFTWGKNSHGQLGLGKEYP----SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ WG N GQLG E + P + K L +K+ +SCGE H+A ++++G
Sbjct: 211 VFGWGMNNAGQLGLSDE-EDRESP----CHVKLL----RTQKVVYISCGEEHTAVLTKSG 261
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYA 306
V+T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG H+ A S G +YA
Sbjct: 262 GVFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 307 WGGSQAGQLGLG 318
+G GQLG G
Sbjct: 319 FGCGAKGQLGTG 330
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 161/341 (47%), Gaps = 32/341 (9%)
Query: 83 LFTWGANEFGQLGDGTE-EG-RKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG GQ G T +G P+ + VK ++CG + + + E DG +
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLE----DGEVY 56
Query: 141 TSRLWVWGQ---NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T L GQ + N P GA I+ V+CG H +ALS+ G L +WG G
Sbjct: 57 TCGLNTKGQLGHEREGNKPEQI-GALADQHIV-HVACGESHSLALSDRGQLFSWGAGSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG T + + PR+I+ + + I QVSCG +H A++ +G+ +TWG S
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQ--------QTILQVSCGNWHCLALAADGQFFTWGKNSH 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG + + P+RV +L+GI + VA GG HS AL+ GA++ WG + AGQLGL
Sbjct: 167 GQLGLG--KEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+ ES + + L+ V ++CG HT V + G + +G S GQ
Sbjct: 225 SDEED------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Query: 378 ANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
++ P V +G EV ++A G H+ + L
Sbjct: 275 GHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 94/204 (46%), Gaps = 14/204 (6%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A + WG N GQ G G+E + Q L G P +A G H+ A
Sbjct: 152 LAADGQFFTWGKNSHGQLGL-GKEYPSQASPQRVRSLEGIPLA------QVAAGGAHSFA 204
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP--RE 134
++ G +F WG N GQLG EE R+ P VK L+++ V ISCG TA + +
Sbjct: 205 LSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVF 264
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGY 193
G S +L N N PR + + Q++CG H +A + GL+ A+G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVN-PRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIYAFGC 321
Query: 194 NEYGQLGRGITCEGLQGPRVIKGY 217
GQLG G TC ++ P +KGY
Sbjct: 322 GAKGQLGTGHTC-NVKCPSPVKGY 344
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 35/252 (13%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+ ++ WG GQ G E + +P+ + L ++CG+ H A+A+
Sbjct: 102 RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL-------NQQTILQVSCGNWHCLALAA 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG FTWG N GQLG G E + P++V+ L+ + ++ G + A++
Sbjct: 155 DGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-------- 206
Query: 139 ISTSRLWVWGQNQGSNF--------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
+ ++ WG N + +SCG H L++ G +
Sbjct: 207 -LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFT 265
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEV 249
+G GQLG + + RV++ ++TQ++CG H+ A V +G +
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGS---------EVTQIACGRQHTLAFVPSSGLI 316
Query: 250 YTWGLGSVGQLG 261
Y +G G+ GQLG
Sbjct: 317 YAFGCGAKGQLG 328
>gi|426231463|ref|XP_004009758.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Ovis aries]
Length = 1050
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 152/312 (48%), Gaps = 52/312 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G ER+ P+Q+ A A+ + +ACG H+ A++ G
Sbjct: 55 VYTCGANTKGQLGH---EREGNKPEQIG-------ALADQHIVHVACGESHSLALSDQGQ 104
Query: 83 LFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
LF+WGA GQLG TE+ P +++L + + +SCG HC A A DG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA-----DG--- 156
Query: 141 TSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
+ + WG+N G FP +P + + QV G H ALS G
Sbjct: 157 --QFFTWGRNSHGQLGLGKEFP----SQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGA 210
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ WG N GQLG + R + K L +K+ +SCGE H+A ++++G
Sbjct: 211 VFGWGMNNAGQLGLSD-----EKDRESPCHVKLL----RTQKVVYISCGEEHTAVLTKSG 261
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYA 306
V+T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG H+ A S G +YA
Sbjct: 262 GVFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 307 WGGSQAGQLGLG 318
+G GQLG G
Sbjct: 319 FGCGARGQLGTG 330
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 157/341 (46%), Gaps = 32/341 (9%)
Query: 83 LFTWGANEFGQLG--DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG GQ G + P+ + VK ++CG + + + E DG +
Sbjct: 1 MLCWGYWSLGQPGISPNLQGVVAEPQVCGFISDRSVKEVACGGNHSVFLLE----DGEVY 56
Query: 141 TSRLWVWGQ---NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T GQ + N P GA I+ V+CG H +ALS+ G L +WG G
Sbjct: 57 TCGANTKGQLGHEREGNKPEQI-GALADQHIV-HVACGESHSLALSDQGQLFSWGAGSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG T + + PR+I+ + + I QVSCG +H A++ +G+ +TWG S
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQ--------QTILQVSCGNWHCLALAADGQFFTWGRNSH 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG + + P+RV +L+GI + V GG HS AL+ GA++ WG + AGQLGL
Sbjct: 167 GQLGLG--KEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+ ES + + L+ V ++CG HT V + G + +G S GQ
Sbjct: 225 SDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Query: 378 ANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
++ P V +G EV ++A G H+ + L
Sbjct: 275 GHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 95/208 (45%), Gaps = 22/208 (10%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPE----LFGCPAGANSRWLDIACGHE 72
+ A + WG N GQ G G+E P Q P+ L G P + G
Sbjct: 152 LAADGQFFTWGRNSHGQLGL-GKE----FPSQASPQRVRSLEGIPLA------QVVAGGA 200
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
H+ A++ G +F WG N GQLG E+ R+ P VK L+++ V ISCG TA + +
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260
Query: 133 --RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQ 189
G S +L N N PR + + Q++CG H +A + GL+
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGY 217
A+G GQLG G TC ++ P +KGY
Sbjct: 318 AFGCGARGQLGTGHTC-NVKCPSPVKGY 344
>gi|421871589|ref|ZP_16303210.1| regulator of chromosome condensation family protein [Brevibacillus
laterosporus GI-9]
gi|372459473|emb|CCF12759.1| regulator of chromosome condensation family protein [Brevibacillus
laterosporus GI-9]
Length = 392
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 107/345 (31%), Positives = 163/345 (47%), Gaps = 43/345 (12%)
Query: 56 CPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGD-GTEEGRKHPEKVKQLQSE 114
P S L + G HT A+ DGT++TWG + +G+LG+ + K P VK L
Sbjct: 77 VPVDDLSDVLMVDTGTSHTVALQKDGTVWTWGWSAYGELGNEKAKSTEKTPHHVKWLSD- 135
Query: 115 FVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTI 168
VK + G + T A+ E DGT+ W +G+N+ G+ R+ + T
Sbjct: 136 -VKQVRAGENFTLALKE----DGTV-----WAFGKNRSGQLGDGTTETRVKPVQVSGLTD 185
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I + G +ALSE G + AWG N GQLG G + LQ +V EL
Sbjct: 186 IVAIDAGEEFSLALSEDGTVWAWGNNSVGQLGNGTREKALQPVQV-----------SELT 234
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF-IKD 287
+ +S GE AV+ NG+VY WG G+LG + +S + +L +DGI+ +
Sbjct: 235 DVIAISTGEKQGYAVTSNGDVYGWGYNQ-GKLGDGTKKSSNSPVL------IDGIYDVIA 287
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
V G H+ AL G ++AWG + GQLG G ++S+ PN+ + + L N +
Sbjct: 288 VDSGKQHTLALKEDGTVWAWGTNTHGQLGYGTPV-NYSMTPNQ--VFLESTEPL---NQI 341
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVD 392
+ G H+ +DG + WG+NS G+ S YP+ ++
Sbjct: 342 VAIDAGGFHSHAIKKDGTVWSWGFNSNGELGLGHSKKQMYPAKIE 386
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 125/269 (46%), Gaps = 42/269 (15%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++ +G N SGQ G E +++ P ++ G + + I G E + A++ DG
Sbjct: 154 TVWAFGKNRSGQLGDGTTETRVK-----PVQVSGL-----TDIVAIDAGEEFSLALSEDG 203
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
T++ WG N GQLG+GT E P +V +L V +IS G A+ S
Sbjct: 204 TVWAWGNNSVGQLGNGTREKALQPVQVSELTD--VIAISTGEKQGYAVT---------SN 252
Query: 142 SRLWVWGQNQG---------SNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
++ WG NQG SN P L G + + V G H +AL E G + AWG
Sbjct: 253 GDVYGWGYNQGKLGDGTKKSSNSPVLIDGIYD----VIAVDSGKQHTLALKEDGTVWAWG 308
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
N +GQLG G P + FL+ L +I + G +HS A+ ++G V++W
Sbjct: 309 TNTHGQLGYGTPVNYSMTPNQV-----FLESTEPLNQIVAIDAGGFHSHAIKKDGTVWSW 363
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALD 281
G S G+LG L K++ P ++ ++
Sbjct: 364 GFNSNGELG---LGHSKKQMYPAKIETIN 389
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 142/318 (44%), Gaps = 55/318 (17%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLD----IACGHEHTAAV 77
++ WG++ G+ G + + + P + +WL + G T A+
Sbjct: 103 TVWTWGWSAYGELGNEKAKSTEKTPHHV-------------KWLSDVKQVRAGENFTLAL 149
Query: 78 ASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG 137
DGT++ +G N GQLGDGT E R P +V L + +I G + A++E DG
Sbjct: 150 KEDGTVWAFGKNRSGQLGDGTTETRVKPVQVSGLTD--IVAIDAGEEFSLALSE----DG 203
Query: 138 TISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
T+ W WG N G+ L + T + +S G A++ G + W
Sbjct: 204 TV-----WAWGNNSVGQLGNGTREKALQPVQVSELTDVIAISTGEKQGYAVTSNGDVYGW 258
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
GYN+ G+LG G T + P +I G + + V G+ H+ A+ E+G V+
Sbjct: 259 GYNQ-GKLGDG-TKKSSNSPVLIDG----------IYDVIAVDSGKQHTLALKEDGTVWA 306
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVV-----ALDGIFIKDVACGGVHSCALTSKGALYA 306
WG + GQLG+ + + + P +V L+ I D GG HS A+ G +++
Sbjct: 307 WGTNTHGQLGYGT--PVNYSMTPNQVFLESTEPLNQIVAID--AGGFHSHAIKKDGTVWS 362
Query: 307 WGGSQAGQLGLGPQTRSF 324
WG + G+LGLG +
Sbjct: 363 WGFNSNGELGLGHSKKQM 380
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 81/193 (41%), Gaps = 18/193 (9%)
Query: 200 GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ 259
G G G G +KG +L + V G H+ A+ ++G V+TWG + G+
Sbjct: 55 GTGSDANGGLGSSSVKGKTTSPVPVDDLSDVLMVDTGTSHTVALQKDGTVWTWGWSAYGE 114
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LG+ +S +K P V L +K V G + AL G ++A+G +++GQLG G
Sbjct: 115 LGNEKAKSTEKT--PHHVKWLSD--VKQVRAGENFTLALKEDGTVWAFGKNRSGQLGDGT 170
Query: 320 QTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
T R P+ V + + G +L DG + WG NS GQ
Sbjct: 171 -------------TETRVKPVQVSGLTDIVAIDAGEEFSLALSEDGTVWAWGNNSVGQLG 217
Query: 379 NEKSTYAWYPSPV 391
N A P V
Sbjct: 218 NGTREKALQPVQV 230
>gi|66810824|ref|XP_639119.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60467743|gb|EAL65761.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 2083
Score = 135 bits (339), Expect = 7e-29, Method: Composition-based stats.
Identities = 118/451 (26%), Positives = 187/451 (41%), Gaps = 122/451 (27%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLR-IPKQLPPELFGCPAGANSRWLDIACGHEHTA 75
I ++ WG N SGQ G +++ PK+L E F S + + CG EH+
Sbjct: 1233 ISESGELFTWGKNQSGQLGHGLDIGKIQTTPKRL--EFF----RGKSPIIMVECGGEHSI 1286
Query: 76 AVASDGTLFTWGANEFGQLGDGTEE-GRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
V SD +++WG ++FGQLG GT+ + P+ ++ + + +++I+ G T + + E
Sbjct: 1287 CVDSDYVVYSWGQDKFGQLGHGTKSVSQNRPKIIEDISGQKIQAIAAGFAHTIVLKKSGE 1346
Query: 135 NDGTISTSRLWVWGQ-NQGSNFPRLFWGAFTPNTI------------------ICQVSCG 175
L+ +G +QG +L G+F +I I Q++CG
Sbjct: 1347 ---------LYSFGYGDQG----QLGHGSFVSKSIPTRIELNTIVGIQHGGGKITQIACG 1393
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
H V S+ G + +WG + GQLG G E + PR+I+ L+ +T++SC
Sbjct: 1394 FGHSVICSDNGEVYSWGLGKQGQLGHG-NYESIARPRLIEA----------LKGVTKISC 1442
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
G +++ A ++ VY+WGLG +LGH S E PR V + + CG H+
Sbjct: 1443 GHFYTMATTDLKNVYSWGLGEHMKLGH---GSDKNEATPRVVDFFIQKNVSKIVCGLNHT 1499
Query: 296 CALTSKGAL--------------------------------------------------- 304
LT G L
Sbjct: 1500 ITLTYPGDLNNNSLSNDDDVNDFIDLAPSTSNSSSSSSLTNDNNNGRSGRLGLNENSQVS 1559
Query: 305 --YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL-----VACGHSHT 357
YA G + G+LGLG +S P F + PI GV ++CG T
Sbjct: 1560 PIYACGAGEHGKLGLGGDLKS----P------FFDKPIPTAIKGVNALNLIDISCGTDFT 1609
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKSTYAWYP 388
+ +G ++ WGY ++GQ N K+ AW P
Sbjct: 1610 AMITSNGALYVWGYGNFGQIGNGKTDDAWVP 1640
Score = 129 bits (323), Expect = 4e-27, Method: Composition-based stats.
Identities = 96/335 (28%), Positives = 155/335 (46%), Gaps = 47/335 (14%)
Query: 51 PELFGCPAGA---NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKH--P 105
PEL CP R + ++CG +H A ++ G LFTWG N+ GQLG G + G+ P
Sbjct: 1204 PELMICPMPPLKNEKRAIKVSCGWDHVALISESGELFTWGKNQSGQLGHGLDIGKIQTTP 1263
Query: 106 EKVKQLQSEF-VKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT 164
++++ + + + + CG + + S ++ WGQ++ F +L G +
Sbjct: 1264 KRLEFFRGKSPIIMVECGGEHSICVD---------SDYVVYSWGQDK---FGQLGHGTKS 1311
Query: 165 -----PNTI-------ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPR 212
P I I ++ G H + L + G L ++GY + GQLG G R
Sbjct: 1312 VSQNRPKIIEDISGQKIQAIAAGFAHTIVLKKSGELYSFGYGDQGQLGHGSFVSKSIPTR 1371
Query: 213 VIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKEL 272
+ + KITQ++CG HS S+NGEVY+WGLG GQLGH + +S +
Sbjct: 1372 IELNTIVGIQHGGG--KITQIACGFGHSVICSDNGEVYSWGLGKQGQLGHGNYESIAR-- 1427
Query: 273 LPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESD 332
PR + AL G + ++CG ++ A T +Y+WG + +LG G + P D
Sbjct: 1428 -PRLIEALKG--VTKISCGHFYTMATTDLKNVYSWGLGEHMKLGHGSDKNEAT--PRVVD 1482
Query: 333 TYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
+ + V + CG +HT+ G ++
Sbjct: 1483 FF--------IQKNVSKIVCGLNHTITLTYPGDLN 1509
Score = 107 bits (267), Expect = 1e-20, Method: Composition-based stats.
Identities = 80/276 (28%), Positives = 123/276 (44%), Gaps = 21/276 (7%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
+VSCG HV +SE G L WG N+ GQLG G+ +Q K F ++P I
Sbjct: 1222 KVSCGWDHVALISESGELFTWGKNQSGQLGHGLDIGKIQ--TTPKRLEFFRGKSP----I 1275
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
V CG HS V + VY+WG GQLGH + P+ + + G I+ +A
Sbjct: 1276 IMVECGGEHSICVDSDYVVYSWGQDKFGQLGHGTKSVSQNR--PKIIEDISGQKIQAIAA 1333
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG---V 347
G H+ L G LY++G GQLG G S + T I+ + +G +
Sbjct: 1334 GFAHTIVLKKSGELYSFGYGDQGQLGHG------SFVSKSIPTRIELNTIVGIQHGGGKI 1387
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH 407
+ACG H+++ +G ++ WG GQ + P ++ G V K++ G +
Sbjct: 1388 TQIACGFGHSVICSDNGEVYSWGLGKQGQLGHGNYESIARPRLIEALKG-VTKISCGHFY 1446
Query: 408 SAVLADACSLKELCEFRLAESVTLSNASEIEDVASR 443
+ D LK + + L E + L + S+ + R
Sbjct: 1447 TMATTD---LKNVYSWGLGEHMKLGHGSDKNEATPR 1479
Score = 105 bits (261), Expect = 7e-20, Method: Composition-based stats.
Identities = 84/314 (26%), Positives = 135/314 (42%), Gaps = 55/314 (17%)
Query: 119 ISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNF-------------PRLFWGAFTP 165
+SCG A I+E E L+ WG+NQ RL + F
Sbjct: 1223 VSCGWDHVALISESGE---------LFTWGKNQSGQLGHGLDIGKIQTTPKRLEF--FRG 1271
Query: 166 NTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAP 225
+ I V CG H + + ++ +WG +++GQLG G P++I+ +
Sbjct: 1272 KSPIIMVECGGEHSICVDSDYVVYSWGQDKFGQLGHGTKSVSQNRPKIIEDISG------ 1325
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV-------V 278
+KI ++ G H+ + ++GE+Y++G G GQLGH S S + +P R+ +
Sbjct: 1326 --QKIQAIAAGFAHTIVLKKSGELYSFGYGDQGQLGHGSFVS---KSIPTRIELNTIVGI 1380
Query: 279 ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
G I +ACG HS + G +Y+WG + GQLG G ES R I
Sbjct: 1381 QHGGGKITQIACGFGHSVICSDNGEVYSWGLGKQGQLGHGNY---------ESIARPRLI 1431
Query: 339 PILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE- 397
L GV ++CGH +T+ ++ WG + + + P VD+ + +
Sbjct: 1432 EAL---KGVTKISCGHFYTMATTDLKNVYSWGLGEHMKLGHGSDKNEATPRVVDFFIQKN 1488
Query: 398 VRKLAAGGGHSAVL 411
V K+ G H+ L
Sbjct: 1489 VSKIVCGLNHTITL 1502
Score = 97.1 bits (240), Expect = 2e-17, Method: Composition-based stats.
Identities = 63/198 (31%), Positives = 99/198 (50%), Gaps = 25/198 (12%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF-IK 286
++ +VSCG H A +SE+GE++TWG GQLGH L G + P+R+ G I
Sbjct: 1218 KRAIKVSCGWDHVALISESGELFTWGKNQSGQLGH-GLDIGKIQTTPKRLEFFRGKSPII 1276
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV---V 343
V CGG HS + S +Y+WG + GQLG G T+S S +N P ++
Sbjct: 1277 MVECGGEHSICVDSDYVVYSWGQDKFGQLGHG--TKSVS----------QNRPKIIEDIS 1324
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-------- 395
+Q +A G +HT+V + G ++ +GY GQ + P+ ++
Sbjct: 1325 GQKIQAIAAGFAHTIVLKKSGELYSFGYGDQGQLGHGSFVSKSIPTRIELNTIVGIQHGG 1384
Query: 396 GEVRKLAAGGGHSAVLAD 413
G++ ++A G GHS + +D
Sbjct: 1385 GKITQIACGFGHSVICSD 1402
Score = 51.6 bits (122), Expect = 9e-04, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S IY G G+ G G + K +P + G A +DI+CG + TA + S+
Sbjct: 1559 SPIYACGAGEHGKLGLGGDLKSPFFDKPIPTAIKGVNA---LNLIDISCGTDFTAMITSN 1615
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKS 118
G L+ WG FGQ+G+G + P ++ S+ +S
Sbjct: 1616 GALYVWGYGNFGQIGNGKTDDAWVPIRIPLTDSKANQS 1653
>gi|300122163|emb|CBK22737.2| unnamed protein product [Blastocystis hominis]
Length = 355
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 157/357 (43%), Gaps = 49/357 (13%)
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G L+TWG+ +FGQLG GT+ P+ K++ +E CT A
Sbjct: 14 GYLYTWGSGQFGQLGIGTQNDESLPQIAKEIDNEI---------CTFTAAGANTTAAITQ 64
Query: 141 TSRLWVWGQNQGSN-------------FPRLFWGAFTPNTII-CQVSCGSVHVVALSECG 186
LW +GQ + PR AF +++ C + G H+ A++E G
Sbjct: 65 GGVLWTFGQGDSNQLGHGDTGDCSNQVLPREVEDAFDGLSVVNCSICDG--HMAAVTEDG 122
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ WG +G+LG + G+ P + G + +V+CG H+ A++++
Sbjct: 123 SVWTWGRGTFGRLGHEVHETGI--PEKVPGLDGM--------RFVKVACGHVHTLALTDD 172
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
G V+ WG G C S P+ + +L G I D++ G S AL+++ +Y
Sbjct: 173 GRVFAWGNNKTG----CVGVSDRGTCAPQEIESLRGKKIIDISAGMESSAALSAEHEVYT 228
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRI 366
WG GQLGLG R S P T RN+PI+ +ACG H L G +
Sbjct: 229 WGADNYGQLGLGQGARYISQ-PTRIRT-LRNVPIV-------QIACGQYHMLALSAAGEV 279
Query: 367 HGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRKLAAGGGHSAVLADACSLKELCE 422
+ WG GQ ANEK P +D V+ +AAGG HSAV+ D L + E
Sbjct: 280 YAWGQGLQGQTANEKKVDTNIPHVIDALKESRVKMIAAGGSHSAVVDDKGRLFTVGE 336
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/245 (33%), Positives = 109/245 (44%), Gaps = 32/245 (13%)
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
H AAV DG+++TWG FG+LG E PEKV L ++CG T A+
Sbjct: 114 HMAAVTEDGSVWTWGRGTFGRLGHEVHE-TGIPEKVPGLDGMRFVKVACGHVHTLALT-- 170
Query: 133 RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSEC 185
+DG R++ WG N+ G P I I +S G ALS
Sbjct: 171 --DDG-----RVFAWGNNKTGCVGVSDRGTCAPQEIESLRGKKIIDISAGMESSAALSAE 223
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF--LDEAPELEKITQVSCGEYHSAAV 243
+ WG + YGQLG G QG R I + L P I Q++CG+YH A+
Sbjct: 224 HEVYTWGADNYGQLGLG------QGARYISQPTRIRTLRNVP----IVQIACGQYHMLAL 273
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
S GEVY WG G GQ + + +P + AL +K +A GG HS + KG
Sbjct: 274 SAAGEVYAWGQGLQGQTAN---EKKVDTNIPHVIDALKESRVKMIAAGGSHSAVVDDKGR 330
Query: 304 LYAWG 308
L+ G
Sbjct: 331 LFTVG 335
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 160/356 (44%), Gaps = 52/356 (14%)
Query: 23 IYVWGYNHSGQ--TGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
+Y WG GQ G + E +I K++ E+ C A TAA+
Sbjct: 16 LYTWGSGQFGQLGIGTQNDESLPQIAKEIDNEI--CTFTAAGA--------NTTAAITQG 65
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF--VKSISCGAHCTAAIAEPRENDGT 138
G L+T+G + QLG G + ++++ F + ++C + C +A E DG+
Sbjct: 66 GVLWTFGQGDSNQLGHGDTGDCSNQVLPREVEDAFDGLSVVNC-SICDGHMAAVTE-DGS 123
Query: 139 ISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+ W WG+ P + +V+CG VH +AL++ G + AW
Sbjct: 124 V-----WTWGRGTFGRLGHEVHETGIPEKVPGLDGMRFVKVACGHVHTLALTDDGRVFAW 178
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G N+ G + G++ G P+ I E+ +KI +S G SAA+S EVYT
Sbjct: 179 GNNKTGCV--GVSDRGTCAPQEI--------ESLRGKKIIDISAGMESSAALSAEHEVYT 228
Query: 252 WGLGSVGQLGHCSLQSGDKEL-LPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
WG + GQLG L G + + P R+ L + I +ACG H AL++ G +YAWG
Sbjct: 229 WGADNYGQLG---LGQGARYISQPTRIRTLRNVPIVQIACGQYHMLALSAAGEVYAWG-- 283
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRI 366
GL QT + + DT ++ + + V+++A G SH+ V GR+
Sbjct: 284 ----QGLQGQTAN----EKKVDTNIPHVIDALKESRVKMIAAGGSHSAVVDDKGRL 331
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 116/250 (46%), Gaps = 45/250 (18%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTA 75
+ +++ WG G GR G E + IP+++P L G R++ +ACGH HT
Sbjct: 118 VTEDGSVWTWG---RGTFGRLGHEVHETGIPEKVPG-LDGM------RFVKVACGHVHTL 167
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
A+ DG +F WG N+ G +G ++ G P++++ L+ + + IS G +AA++ E
Sbjct: 168 ALTDDGRVFAWGNNKTGCVGV-SDRGTCAPQEIESLRGKKIIDISAGMESSAALSAEHE- 225
Query: 136 DGTISTSRLWVWGQNQGSNFPRLFWGA------------FTPNTIICQVSCGSVHVVALS 183
++ WG + N+ +L G N I Q++CG H++ALS
Sbjct: 226 --------VYTWGAD---NYGQLGLGQGARYISQPTRIRTLRNVPIVQIACGQYHMLALS 274
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
G + AWG GQ + P VI +A + ++ ++ G HSA V
Sbjct: 275 AAGEVYAWGQGLQGQTANEKKVD-TNIPHVI--------DALKESRVKMIAAGGSHSAVV 325
Query: 244 SENGEVYTWG 253
+ G ++T G
Sbjct: 326 DDKGRLFTVG 335
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 73/184 (39%), Gaps = 48/184 (26%)
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSC 296
++ +A E G +YTWG G GQLG + + + E LP+ +D A G +
Sbjct: 4 KHLNAQEKEGGYLYTWGSGQFGQLG---IGTQNDESLPQIAKEIDNEICTFTAAGANTTA 60
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTR-SFSLIPNESDTYFRNIPIL-------------- 341
A+T G L+ +G + QLG G S ++P E + F + ++
Sbjct: 61 AITQGGVLWTFGQGDSNQLGHGDTGDCSNQVLPREVEDAFDGLSVVNCSICDGHMAAVTE 120
Query: 342 --------------------------VVP--NGVQL--VACGHSHTLVYMRDGRIHGWGY 371
VP +G++ VACGH HTL DGR+ WG
Sbjct: 121 DGSVWTWGRGTFGRLGHEVHETGIPEKVPGLDGMRFVKVACGHVHTLALTDDGRVFAWGN 180
Query: 372 NSYG 375
N G
Sbjct: 181 NKTG 184
>gi|139948634|ref|NP_001077132.1| probable E3 ubiquitin-protein ligase HERC3 [Bos taurus]
gi|124829040|gb|AAI33342.1| HERC3 protein [Bos taurus]
gi|296486686|tpg|DAA28799.1| TPA: hect domain and RLD 3 [Bos taurus]
Length = 1050
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 152/312 (48%), Gaps = 52/312 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G ER+ P+Q+ A A+ + +ACG H+ A++ G
Sbjct: 55 VYTCGVNTKGQLGH---EREGNKPEQIG-------ALADQHIVHVACGESHSLALSDQGQ 104
Query: 83 LFTWGANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
LF+WGA GQLG T E+ P +++L + + +SCG HC A A DG
Sbjct: 105 LFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA-----DG--- 156
Query: 141 TSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
+ + WG+N G FP +P + + QV G H ALS G
Sbjct: 157 --QFFTWGRNSHGQLGLGKEFP----SQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGA 210
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ WG N GQLG + R + K L +K+ +SCGE H+A ++++G
Sbjct: 211 VFGWGMNNAGQLGLSD-----EKDRESPCHVKLL----RTQKVVYISCGEEHTAVLTKSG 261
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYA 306
V+T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG H+ A S G +YA
Sbjct: 262 GVFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 307 WGGSQAGQLGLG 318
+G GQLG G
Sbjct: 319 FGCGARGQLGTG 330
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 157/341 (46%), Gaps = 32/341 (9%)
Query: 83 LFTWGANEFGQLG--DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG GQ G + P+ + VK ++CG + + + E DG +
Sbjct: 1 MLCWGYWSLGQPGISPNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLE----DGEVY 56
Query: 141 TSRLWVWGQ---NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + GQ + N P GA I+ V+CG H +ALS+ G L +WG G
Sbjct: 57 TCGVNTKGQLGHEREGNKPEQI-GALADQHIV-HVACGESHSLALSDQGQLFSWGAGSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + + PR+I+ + + I QVSCG +H A++ +G+ +TWG S
Sbjct: 115 QLGLMTIEDSVAVPRLIQKLNQ--------QTILQVSCGNWHCLALAADGQFFTWGRNSH 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG + + P+RV +L+GI + V GG HS AL+ GA++ WG + AGQLGL
Sbjct: 167 GQLGLG--KEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+ ES + + L+ V ++CG HT V + G + +G S GQ
Sbjct: 225 SDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Query: 378 ANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
++ P V +G EV ++A G H+ + L
Sbjct: 275 GHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 95/208 (45%), Gaps = 22/208 (10%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPE----LFGCPAGANSRWLDIACGHE 72
+ A + WG N GQ G G+E P Q P+ L G P + G
Sbjct: 152 LAADGQFFTWGRNSHGQLGL-GKE----FPSQASPQRVRSLEGIPLA------QVVAGGA 200
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
H+ A++ G +F WG N GQLG E+ R+ P VK L+++ V ISCG TA + +
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260
Query: 133 --RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQ 189
G S +L N N PR + + Q++CG H +A + GL+
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGY 217
A+G GQLG G TC ++ P +KGY
Sbjct: 318 AFGCGARGQLGTGHTC-NVKCPSPVKGY 344
>gi|63995563|gb|AAY41038.1| unknown [Homo sapiens]
Length = 382
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 104/312 (33%), Positives = 152/312 (48%), Gaps = 52/312 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G ER+ P+Q+ A A+ + +ACG H+ A++ G
Sbjct: 55 VYTCGLNTKGQLGH---EREGNKPEQIG-------ALADQHIIHVACGESHSLALSDRGQ 104
Query: 83 LFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
LF+WGA GQLG TE+ P +++L + + +SCG HC A A+
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAAD--------- 155
Query: 141 TSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
+ + WG+N G FP +P + + QV+ G H ALS G
Sbjct: 156 -GQFFTWGKNSHGQLGLGKEFPS----QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ WG N GQLG + R + K L +K+ +SCGE H+A ++++G
Sbjct: 211 VFGWGMNNAGQLGLSD-----EKDRESPCHVKLL----RTQKVVYISCGEEHTAVLTKSG 261
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYA 306
V+T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG H+ A S G +YA
Sbjct: 262 GVFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 307 WGGSQAGQLGLG 318
+G GQLG G
Sbjct: 319 FGCGARGQLGTG 330
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 159/344 (46%), Gaps = 38/344 (11%)
Query: 83 LFTWGANEFGQLGDGT--EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG GQ G T + P+ + VK ++CG + + + E DG +
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLE----DGEVY 56
Query: 141 TSRLWVWGQ---NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T L GQ + N P GA II V+CG H +ALS+ G L +WG G
Sbjct: 57 TCGLNTKGQLGHEREGNKPEQI-GALADQHII-HVACGESHSLALSDRGQLFSWGAGSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG T + + PR+I+ + + I QVSCG +H A++ +G+ +TWG S
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQ--------QTILQVSCGNWHCLALAADGQFFTWGKNSH 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG + + P+RV +L+GI + VA GG HS AL+ GA++ WG + AGQLGL
Sbjct: 167 GQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPI---LVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
SD R P L+ V ++CG HT V + G + +G S
Sbjct: 225 -------------SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
Query: 375 GQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
GQ ++ P V +G EV ++A G H+ + L
Sbjct: 272 GQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 167/372 (44%), Gaps = 34/372 (9%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+ WGY GQ G + + Q+ C ++ ++ACG H+ + DG
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQV------CGFISDRSVKEVACGGNHSVFLLEDGE 54
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE--NDGTIS 140
++T G N GQLG EG K PE++ L + + ++CG + A+++ + + G S
Sbjct: 55 VYTCGLNTKGQLGH-EREGNK-PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLG 200
+L + PRL TI+ QVSCG+ H +AL+ G WG N +GQLG
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQ-KLNQQTIL-QVSCGNWHCLALAADGQFFTWGKNSHGQLG 170
Query: 201 RGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQL 260
G P+ ++ L+ P + QV+ G HS A+S +G V+ WG+ + GQL
Sbjct: 171 LGKEFPSQASPQRVRS----LEGIP----LAQVAAGGAHSFALSLSGAVFGWGMNNAGQL 222
Query: 261 GHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQ 320
G L P V L + ++CG H+ LT G ++ +G GQLG
Sbjct: 223 G---LSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH--- 276
Query: 321 TRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQAAN 379
+ +D + ++ + V +ACG HTL ++ G I+ +G + GQ
Sbjct: 277 -------DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGT 329
Query: 380 EKSTYAWYPSPV 391
+ PSPV
Sbjct: 330 GHTCNVKCPSPV 341
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 35/252 (13%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+ ++ WG GQ G E + +P+ + L ++CG+ H A+A+
Sbjct: 102 RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL-------NQQTILQVSCGNWHCLALAA 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG FTWG N GQLG G E + P++V+ L+ + ++ G + A++
Sbjct: 155 DGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-------- 206
Query: 139 ISTSRLWVWGQNQGSNF--------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
+ ++ WG N + +SCG H L++ G +
Sbjct: 207 -LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFT 265
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEV 249
+G GQLG + + RV++ ++TQ++CG H+ A V +G +
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGS---------EVTQIACGRQHTLAFVPSSGLI 316
Query: 250 YTWGLGSVGQLG 261
Y +G G+ GQLG
Sbjct: 317 YAFGCGARGQLG 328
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 94/204 (46%), Gaps = 14/204 (6%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A + WG N GQ G G+E + Q L G P +A G H+ A
Sbjct: 152 LAADGQFFTWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLA------QVAAGGAHSFA 204
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP--RE 134
++ G +F WG N GQLG E+ R+ P VK L+++ V ISCG TA + +
Sbjct: 205 LSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVF 264
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGY 193
G S +L N N R+ + + Q++CG H +A + GL+ A+G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRVLE---LMGSEVTQIACGRQHTLAFVPSSGLIYAFGC 321
Query: 194 NEYGQLGRGITCEGLQGPRVIKGY 217
GQLG G TC ++ P +KGY
Sbjct: 322 GARGQLGTGHTCN-VKCPSPVKGY 344
>gi|444915470|ref|ZP_21235602.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444713401|gb|ELW54301.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 852
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 111/358 (31%), Positives = 162/358 (45%), Gaps = 51/358 (14%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+A G +HT + DGT++ WG N++GQLGDGT R P +V L +++++ + +
Sbjct: 145 VAVGTQHTLLLRPDGTVWAWGPNDYGQLGDGTTTNRPVPVQVGGLSG--IRAVAASSDHS 202
Query: 127 AAIAEPRENDGTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVV 180
A+ +DGT+ W WG N G+ RL + I +V+ G + +
Sbjct: 203 LAV----RDDGTV-----WAWGINSSGQLGDGTTNDRLTPVQVAGLSSIKRVAAGDGYSL 253
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
A+ G + AWG N GQLG G T + R+ G K L E E+ G H
Sbjct: 254 AVHGDGTVWAWGINSSGQLGDGTTTD-----RLTPGRVKGLSEVVEVSAAKYSLLGSAHV 308
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG--------- 291
AV +G V+ WG GQLG + L P +V LDG +K +A G
Sbjct: 309 LAVRGDGTVWAWGNNGSGQLGDGTTT---DRLTPVQVSELDG--VKAIAVGNSFPLSNSN 363
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQLV 350
G +S A+ G ++AWG + GQLG G T R+ P V +G+ V
Sbjct: 364 GSYSLAVRGDGTVWAWGSNSTGQLGDGT-------------TISRSRPAQVNALSGITAV 410
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
+ H L DG + WG N+ G+ +E + + P V G VR +AAG HS
Sbjct: 411 SASSDHALAMRDDGTVWSWGKNTNGKLGDETTAHRLIPVQVHGLSG-VRSVAAGESHS 467
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 125/404 (30%), Positives = 174/404 (43%), Gaps = 67/404 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA--NSRWLDIACGHEHTAAVASD 80
++ WG N SGQ G G P Q+ EL G A A NS L + G ++ AV D
Sbjct: 317 VWAWGNNGSGQLG-DGTTTDRLTPVQVS-ELDGVKAIAVGNSFPLSNSNG-SYSLAVRGD 373
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
GT++ WG+N GQLGDGT R P +V L + ++S + A+ +DGT+
Sbjct: 374 GTVWAWGSNSTGQLGDGTTISRSRPAQVNALSG--ITAVSASSDHALAM----RDDGTV- 426
Query: 141 TSRLWVWGQNQGSNFP------RLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
W WG+N RL + + V+ G H V++ E G AWGY
Sbjct: 427 ----WSWGKNTNGKLGDETTAHRLIPVQVHGLSGVRSVAAGESHSVSVREDGKAWAWGYR 482
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPE----LEKITQVSCGEYHSAAVSENGEVY 250
G LG G A FL P L Q++ S AV E+ ++
Sbjct: 483 GMGLLGDG---------------AMFLSFVPVQTMGLTATAQIASHGNRSLAVKEDNTLW 527
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
WG S+G LG S + +P + LD + K VA G +S A+ + G+L+AWG +
Sbjct: 528 VWGSSSLGDLGDGSTGA---HPVPSSI--LDDV--KAVAAGNDYSLAVRNNGSLWAWGSN 580
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV---ACGHSHTLVYMRDGRIH 367
GQLG G T + +P NG++ V A S +L DG +
Sbjct: 581 SIGQLGDGSTTNRLTPVP---------------VNGLENVVGAAASFSVSLALRSDGTVW 625
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
WG NS GQ + + P PV V + +A GGHS L
Sbjct: 626 AWGLNSVGQLGDGSTINRSTPGPVGGLV-HIVGVATSGGHSLAL 668
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 168/381 (44%), Gaps = 59/381 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + ++VWG + G G G +P + ++ +A G++++ A
Sbjct: 520 VKEDNTLWVWGSSSLGDLG-DGSTGAHPVPSSILDDVKA-----------VAAGNDYSLA 567
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V ++G+L+ WG+N GQLGDG+ R P V L++ GA + +++ +D
Sbjct: 568 VRNNGSLWAWGSNSIGQLGDGSTTNRLTPVPVNGLENV------VGAAASFSVSLALRSD 621
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
GT+ W WG N GS R G I V+ H +AL G + A
Sbjct: 622 GTV-----WAWGLNSVGQLGDGSTINRSTPGPVGGLVHIVGVATSGGHSLALRNDGTVWA 676
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG N GQLG G T P+ + + L + V+ SA V +NG V+
Sbjct: 677 WGGNHDGQLGDGTTT---NQPKPV--------QVSGLSGVKAVAAAIVSSAVVRDNGTVW 725
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
WG GQLG + L P V L G +K +A G H AL + G ++AWG +
Sbjct: 726 AWGDNYSGQLGDGTTT---DRLTPVLVSGLSG--VKALASGNHHFLALRNDGTVWAWGDN 780
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGW 369
QLG G +T+ R+ P+ V + V+L+A G +H++ +DG + W
Sbjct: 781 YYSQLGDGTRTQ-------------RSTPVQVRGLSDVKLIAAGENHSMAVRKDGTVWTW 827
Query: 370 GYNSYGQAANEKSTYAWYPSP 390
G N+ GQ N ++ P P
Sbjct: 828 GLNTSGQLGNGLLDFSALPVP 848
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 109/383 (28%), Positives = 163/383 (42%), Gaps = 56/383 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLP--PELFGCPAGANSRWLDIACGHEHTAAVASD 80
++ WG N SGQ G G P ++ E+ A S G H AV D
Sbjct: 261 VWAWGINSSGQLG-DGTTTDRLTPGRVKGLSEVVEVSAAKYSL-----LGSAHVLAVRGD 314
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-----AHCTAAIAEPREN 135
GT++ WG N GQLGDGT R P +V +L + VK+I+ G ++ + +
Sbjct: 315 GTVWAWGNNGSGQLGDGTTTDRLTPVQVSEL--DGVKAIAVGNSFPLSNSNGSYSLAVRG 372
Query: 136 DGTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQ 189
DGT+ W WG N G+ R + I VS S H +A+ + G +
Sbjct: 373 DGTV-----WAWGSNSTGQLGDGTTISRSRPAQVNALSGITAVSASSDHALAMRDDGTVW 427
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
+WG N G+LG T L P + G L + V+ GE HS +V E+G+
Sbjct: 428 SWGKNTNGKLGDETTAHRLI-PVQVHG----------LSGVRSVAAGESHSVSVREDGKA 476
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
+ WG +G LG ++ +P + + L +A G S A+ L+ WG
Sbjct: 477 WAWGYRGMGLLGDGAMF---LSFVPVQTMGL--TATAQIASHGNRSLAVKEDNTLWVWGS 531
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGW 369
S G LG G T +P ++ + V+ VA G+ ++L +G + W
Sbjct: 532 SSLGDLGDG-------------STGAHPVPSSILDD-VKAVAAGNDYSLAVRNNGSLWAW 577
Query: 370 GYNSYGQAANEKSTYAWYPSPVD 392
G NS GQ + +T P PV+
Sbjct: 578 GSNSIGQLGDGSTTNRLTPVPVN 600
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 129/472 (27%), Positives = 189/472 (40%), Gaps = 112/472 (23%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N +GQ G + R P Q+ L G A ++ +H A+ DGT
Sbjct: 376 VWAWGSNSTGQLGDGTTISRSR-PAQVN-ALSGITA--------VSASSDHALAMRDDGT 425
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE----------- 131
+++WG N G+LGD T R P +V L V+S++ G + ++ E
Sbjct: 426 VWSWGKNTNGKLGDETTAHRLIPVQVHGLSG--VRSVAAGESHSVSVREDGKAWAWGYRG 483
Query: 132 --------------PRENDGTISTSR----------------LWVWGQNQGSNFPRLFWG 161
P + G +T++ LWVWG + + G
Sbjct: 484 MGLLGDGAMFLSFVPVQTMGLTATAQIASHGNRSLAVKEDNTLWVWGSSSLGDLGDGSTG 543
Query: 162 AF-TPNTI---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGY 217
A P++I + V+ G+ + +A+ G L AWG N GQLG G T L P + G
Sbjct: 544 AHPVPSSILDDVKAVAAGNDYSLAVRNNGSLWAWGSNSIGQLGDGSTTNRLT-PVPVNG- 601
Query: 218 AKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV 277
LE + + S A+ +G V+ WGL SVGQLG S P V
Sbjct: 602 ---------LENVVGAAASFSVSLALRSDGTVWAWGLNSVGQLGDGSTI---NRSTPGPV 649
Query: 278 VALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR--------------- 322
L + I VA G HS AL + G ++AWGG+ GQLG G T
Sbjct: 650 GGL--VHIVGVATSGGHSLALRNDGTVWAWGGNHDGQLGDGTTTNQPKPVQVSGLSGVKA 707
Query: 323 ----------------------SFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLV 359
++S + T R P+LV +GV+ +A G+ H L
Sbjct: 708 VAAAIVSSAVVRDNGTVWAWGDNYSGQLGDGTTTDRLTPVLVSGLSGVKALASGNHHFLA 767
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
DG + WG N Y Q + T P V + +V+ +AAG HS +
Sbjct: 768 LRNDGTVWAWGDNYYSQLGDGTRTQRSTPVQVR-GLSDVKLIAAGENHSMAV 818
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 110/241 (45%), Gaps = 23/241 (9%)
Query: 164 TPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDE 223
+P I V+ G+ H + L G + AWG N+YGQLG G T P + G
Sbjct: 137 SPTCIAPAVAVGTQHTLLLRPDGTVWAWGPNDYGQLGDGTTTN-RPVPVQVGG------- 188
Query: 224 APELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
L I V+ HS AV ++G V+ WG+ S GQLG + + L P +V L
Sbjct: 189 ---LSGIRAVAASSDHSLAVRDDGTVWAWGINSSGQLGDGTT---NDRLTPVQVAGLSS- 241
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
IK VA G +S A+ G ++AWG + +GQLG G T + L P + + +V
Sbjct: 242 -IKRVAAGDGYSLAVHGDGTVWAWGINSSGQLGDG--TTTDRLTPGR----VKGLSEVVE 294
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 403
+ + G +H L DG + WG N GQ + +T P V G V+ +A
Sbjct: 295 VSAAKYSLLGSAHVLAVRGDGTVWAWGNNGSGQLGDGTTTDRLTPVQVSELDG-VKAIAV 353
Query: 404 G 404
G
Sbjct: 354 G 354
>gi|24659266|gb|AAH38960.1| HERC3 protein [Homo sapiens]
Length = 368
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 104/312 (33%), Positives = 152/312 (48%), Gaps = 52/312 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G ER+ P+Q+ A A+ + +ACG H+ A++ G
Sbjct: 55 VYTCGLNTKGQLGH---EREGNKPEQIG-------ALADQHIIHVACGESHSLALSDRGQ 104
Query: 83 LFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
LF+WGA GQLG TE+ P +++L + + +SCG HC A A+
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAAD--------- 155
Query: 141 TSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
+ + WG+N G FP +P + + QV+ G H ALS G
Sbjct: 156 -GQFFTWGKNSHGQLGLGKEFPS----QASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ WG N GQLG + R + K L +K+ +SCGE H+A ++++G
Sbjct: 211 VFGWGMNNAGQLGLSD-----EKDRESPCHVKLL----RTQKVVYISCGEEHTAVLTKSG 261
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYA 306
V+T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG H+ A S G +YA
Sbjct: 262 GVFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 307 WGGSQAGQLGLG 318
+G GQLG G
Sbjct: 319 FGCGARGQLGTG 330
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 110/344 (31%), Positives = 160/344 (46%), Gaps = 38/344 (11%)
Query: 83 LFTWGANEFGQLGDGTE-EG-RKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG GQ G T +G P+ + VK ++CG + + + E DG +
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLE----DGEVY 56
Query: 141 TSRLWVWGQ---NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T L GQ + N P GA II V+CG H +ALS+ G L +WG G
Sbjct: 57 TCGLNTKGQLGHEREGNKPEQI-GALADQHII-HVACGESHSLALSDRGQLFSWGAGSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG T + + PR+I+ + + I QVSCG +H A++ +G+ +TWG S
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQ--------QTILQVSCGNWHCLALAADGQFFTWGKNSH 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG + + P+RV +L+GI + VA GG HS AL+ GA++ WG + AGQLGL
Sbjct: 167 GQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPI---LVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
SD R P L+ V ++CG HT V + G + +G S
Sbjct: 225 -------------SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
Query: 375 GQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
GQ ++ P V +G EV ++A G H+ + L
Sbjct: 272 GQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 167/372 (44%), Gaps = 34/372 (9%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+ WGY GQ G + + Q+ C ++ ++ACG H+ + DG
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQV------CGFISDRSVKEVACGGNHSVFLLEDGE 54
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE--NDGTIS 140
++T G N GQLG EG K PE++ L + + ++CG + A+++ + + G S
Sbjct: 55 VYTCGLNTKGQLGH-EREGNK-PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLG 200
+L + PRL TI+ QVSCG+ H +AL+ G WG N +GQLG
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQ-KLNQQTIL-QVSCGNWHCLALAADGQFFTWGKNSHGQLG 170
Query: 201 RGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQL 260
G P+ ++ L+ P + QV+ G HS A+S +G V+ WG+ + GQL
Sbjct: 171 LGKEFPSQASPQRVRS----LEGIP----LAQVAAGGAHSFALSLSGAVFGWGMNNAGQL 222
Query: 261 GHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQ 320
G L P V L + ++CG H+ LT G ++ +G GQLG
Sbjct: 223 G---LSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH--- 276
Query: 321 TRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQAAN 379
+ +D + ++ + V +ACG HTL ++ G I+ +G + GQ
Sbjct: 277 -------DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGT 329
Query: 380 EKSTYAWYPSPV 391
+ PSPV
Sbjct: 330 GHTCNVKCPSPV 341
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 35/252 (13%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+ ++ WG GQ G E + +P+ + L ++CG+ H A+A+
Sbjct: 102 RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL-------NQQTILQVSCGNWHCLALAA 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG FTWG N GQLG G E + P++V+ L+ + ++ G + A++
Sbjct: 155 DGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-------- 206
Query: 139 ISTSRLWVWGQNQGSNF--------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
+ ++ WG N + +SCG H L++ G +
Sbjct: 207 -LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFT 265
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEV 249
+G GQLG + + RV++ ++TQ++CG H+ A V +G +
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGS---------EVTQIACGRQHTLAFVPSSGLI 316
Query: 250 YTWGLGSVGQLG 261
Y +G G+ GQLG
Sbjct: 317 YAFGCGARGQLG 328
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 94/204 (46%), Gaps = 14/204 (6%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A + WG N GQ G G+E + Q L G P +A G H+ A
Sbjct: 152 LAADGQFFTWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLA------QVAAGGAHSFA 204
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP--RE 134
++ G +F WG N GQLG E+ R+ P VK L+++ V ISCG TA + +
Sbjct: 205 LSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVF 264
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGY 193
G S +L N N R+ + + Q++CG H +A + GL+ A+G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRVL---ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGC 321
Query: 194 NEYGQLGRGITCEGLQGPRVIKGY 217
GQLG G TC ++ P +KGY
Sbjct: 322 GARGQLGTGHTCN-VKCPSPVKGY 344
>gi|295696487|ref|YP_003589725.1| S-layer protein [Kyrpidia tusciae DSM 2912]
gi|295412089|gb|ADG06581.1| S-layer domain protein [Kyrpidia tusciae DSM 2912]
Length = 1423
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 111/354 (31%), Positives = 164/354 (46%), Gaps = 65/354 (18%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++ WG N +GQ G RQ P Q G P+ A ++ G H+ A+ DG
Sbjct: 91 VWAWGDNTNGQLGDGTTTGRQTPTPAQ------GLPSVA-----QVSAGESHSLALTDDG 139
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSE-FVKSISCGAHCTAAIAEPRENDGTIS 140
+F WG N GQLGDGT + P +V+ L ++ +K ++ G + + A+ +DG
Sbjct: 140 RVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIKVVAAGGNHSLAL----TSDG--- 192
Query: 141 TSRLWVWGQNQG----------SNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
R++ WG+N S+ P G N + V+ G H +AL+ G + A
Sbjct: 193 --RVFAWGKNSSGQLGNNSTVDSSIPVQVQG-LPAN--VTAVAAGGNHSLALTSDGRIYA 247
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG N GQLG G T P ++ G P K VS G+ HS A+ ++G VY
Sbjct: 248 WGLNSSGQLGDGTTSNS-STPVLVAGL-------PAGSKPVAVSAGKDHSLALMQDGTVY 299
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
WG S GQLG+ + + + +P +V L + V+ GG S ALTS G +YAWG +
Sbjct: 300 AWGGNSYGQLGNGTTTASE---MPVQVTGLAN--VTAVSAGGSDSLALTSDGYVYAWGLN 354
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 364
+GQLG G T RN P+ V +++ G T + + DG
Sbjct: 355 SSGQLGDG-------------TTSNRNTPVRV----FSVLSTGALLTDLQLSDG 391
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 147/321 (45%), Gaps = 48/321 (14%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++ G H+ + SD T++ WG N GQLGDGT GR+ P + L S V +S G +
Sbjct: 75 VSAGGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTGRQTPTPAQGLPS--VAQVSAGESHS 132
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQG----------SNFPRLFWGAFTPNTIICQVSCGS 176
A+ + DG R++ WG N S P G T +TI V+ G
Sbjct: 133 LALTD----DG-----RVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIKV-VAAGG 182
Query: 177 VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG 236
H +AL+ G + AWG N GQLG T + P ++G +T V+ G
Sbjct: 183 NHSLALTSDGRVFAWGKNSSGQLGNNSTVDS-SIPVQVQGLPA---------NVTAVAAG 232
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSC 296
HS A++ +G +Y WGL S GQLG + + +L + A G V+ G HS
Sbjct: 233 GNHSLALTSDGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGLPA--GSKPVAVSAGKDHSL 290
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV-PNGVQLVACGHS 355
AL G +YAWGG+ GQLG G T S +P+ V V V+ G S
Sbjct: 291 ALMQDGTVYAWGGNSYGQLGNGTTTAS-------------EMPVQVTGLANVTAVSAGGS 337
Query: 356 HTLVYMRDGRIHGWGYNSYGQ 376
+L DG ++ WG NS GQ
Sbjct: 338 DSLALTSDGYVYAWGLNSSGQ 358
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 135/282 (47%), Gaps = 36/282 (12%)
Query: 140 STSRLWVWGQNQGSNFPR-LFWGAFTPNTI-----ICQVSCGSVHVVALSECGLLQAWGY 193
S +W WG N G TP + QVS G H +AL++ G + AWG
Sbjct: 87 SDQTVWAWGDNTNGQLGDGTTTGRQTPTPAQGLPSVAQVSAGESHSLALTDDGRVFAWGL 146
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
N GQLG G T + + P ++G A I V+ G HS A++ +G V+ WG
Sbjct: 147 NSSGQLGDGTTADS-RTPVQVQGLATD-------STIKVVAAGGNHSLALTSDGRVFAWG 198
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
S GQLG+ S +P +V L + VA GG HS ALTS G +YAWG + +G
Sbjct: 199 KNSSGQLGNNSTVDSS---IPVQVQGLPA-NVTAVAAGGNHSLALTSDGRIYAWGLNSSG 254
Query: 314 QLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLVAC--GHSHTLVYMRDGRIHGW 369
QLG G + S + P+LV +P G + VA G H+L M+DG ++ W
Sbjct: 255 QLGDGTTSNS-------------STPVLVAGLPAGSKPVAVSAGKDHSLALMQDGTVYAW 301
Query: 370 GYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
G NSYGQ N +T + P V + V ++AGG S L
Sbjct: 302 GGNSYGQLGNGTTTASEMPVQVT-GLANVTAVSAGGSDSLAL 342
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/250 (36%), Positives = 122/250 (48%), Gaps = 38/250 (15%)
Query: 170 CQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK 229
VS G H + L+ + AWG N GQLG G T G Q P +G L
Sbjct: 73 AAVSAGGSHSLVLTSDQTVWAWGDNTNGQLGDG-TTTGRQTPTPAQG----------LPS 121
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI----FI 285
+ QVS GE HS A++++G V+ WGL S GQLG + + D R V + G+ I
Sbjct: 122 VAQVSAGESHSLALTDDGRVFAWGLNSSGQLGDGT--TADS----RTPVQVQGLATDSTI 175
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--V 343
K VA GG HS ALTS G ++AWG + +GQLG + T +IP+ V +
Sbjct: 176 KVVAAGGNHSLALTSDGRVFAWGKNSSGQLG-------------NNSTVDSSIPVQVQGL 222
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLA- 402
P V VA G +H+L DGRI+ WG NS GQ + ++ + P V + +A
Sbjct: 223 PANVTAVAAGGNHSLALTSDGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAV 282
Query: 403 -AGGGHSAVL 411
AG HS L
Sbjct: 283 SAGKDHSLAL 292
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 80/173 (46%), Gaps = 30/173 (17%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
IY WG N SGQ G P + G PAG S+ + ++ G +H+ A+ DGT
Sbjct: 245 IYAWGLNSSGQLGDGTTSN-----SSTPVLVAGLPAG--SKPVAVSAGKDHSLALMQDGT 297
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG N +GQLG+GT + P +V L + V ++S G + A+ +DG +
Sbjct: 298 VYAWGGNSYGQLGNGTTTASEMPVQVTGLAN--VTAVSAGGSDSLAL----TSDGYV--- 348
Query: 143 RLWVWGQNQGS----------NFPRLFWGAFTPNTIIC--QVSCGSVHVVALS 183
+ WG N N P + + ++ Q+S GS + +ALS
Sbjct: 349 --YAWGLNSSGQLGDGTTSNRNTPVRVFSVLSTGALLTDLQLSDGSSNPIALS 399
>gi|86129504|ref|NP_001034387.1| probable E3 ubiquitin-protein ligase HERC3 [Gallus gallus]
gi|60098971|emb|CAH65316.1| hypothetical protein RCJMB04_17g7 [Gallus gallus]
Length = 1050
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/311 (34%), Positives = 152/311 (48%), Gaps = 50/311 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G + + PE G AG + + +ACG H+ A++ G
Sbjct: 55 VYTCGLNTKGQLGHESEGSK--------PEPIGALAGQHI--VHVACGESHSVALSDQGQ 104
Query: 83 LFTWGANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
+F+WGA GQLG T E+ P +K+L + + ISCG HC A A DG
Sbjct: 105 VFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAA-----DG--- 156
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFTPNTI------------ICQVSCGSVHVVALSECGLL 188
+ + WGQN ++ +L G P+ + QV+ G H ALS G +
Sbjct: 157 --QFFTWGQN---SYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAV 211
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG N GQLG + R + K L +K+ +SCGE H+A ++++G
Sbjct: 212 FGWGKNSSGQLGLSD-----ERDRESPCHVKLLRS----QKVVYISCGEEHTAVLTKSGG 262
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYAW 307
V+T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG H+ A S G +YA+
Sbjct: 263 VFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAF 319
Query: 308 GGSQAGQLGLG 318
G GQLG G
Sbjct: 320 GCGTRGQLGTG 330
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 133/460 (28%), Positives = 204/460 (44%), Gaps = 78/460 (16%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFT 85
WGY+ GQ G G Q+ IP+ P+++G N + ++ACG H+ + DG ++T
Sbjct: 4 WGYSSFGQPG-IGSNLQVIIPE---PQVYGFIHDRNVK--EVACGGNHSVFLLEDGEVYT 57
Query: 86 WGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE--NDGTISTSR 143
G N GQLG +E + PE + L + + ++CG + A+++ + + G S +
Sbjct: 58 CGLNTKGQLGHESEGSK--PEPIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQ 115
Query: 144 LWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGI 203
L + PRL TI+ Q+SCG+ H +AL+ G WG N YGQLG G
Sbjct: 116 LGLTTIEDAVTVPRLI-KKLNQQTIL-QISCGNWHCLALAADGQFFTWGQNSYGQLGLGK 173
Query: 204 TCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHC 263
C P+ +K LD P + QV+ G HS A+S +G V+ WG S GQLG
Sbjct: 174 ECPSQASPQRVKS----LDGIP----LAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLS 225
Query: 264 SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG------- 316
D+E P V L + ++CG H+ LT G ++ +G GQLG
Sbjct: 226 D--ERDRE-SPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282
Query: 317 LGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYG 375
+ P+ R L+ +E V +ACG HTL ++ G I+ +G + G
Sbjct: 283 VNPR-RVLELMGSE----------------VSQIACGRHHTLAFVPSSGMIYAFGCGTRG 325
Query: 376 QAANEKSTYAWYPSPVD--WCVGEVRKLAAGGGHSAVLADACSLKELCEFRLAESVTLSN 433
Q + PSPV W AA G + DA C++ + + +
Sbjct: 326 QLGTGHTCNVKCPSPVKGHW--------AAHNGQLSGKPDA------CKYHIVKHIF--- 368
Query: 434 ASEIEDVASRTGSEALARLCERLREHSLHGDEFDCDDDTR 473
+G + LC + E+SL D+F + TR
Sbjct: 369 ----------SGGDQTFVLCSK-YENSLPADDFRTINGTR 397
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 108/336 (32%), Positives = 162/336 (48%), Gaps = 40/336 (11%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ--LQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG + FGQ G G+ PE + VK ++CG + + + E DG +
Sbjct: 1 MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLE----DGEVY 56
Query: 141 TSRLWVWGQ----NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
T L GQ ++GS + GA I+ V+CG H VALS+ G + +WG
Sbjct: 57 TCGLNTKGQLGHESEGSKPEPI--GALAGQHIV-HVACGESHSVALSDQGQVFSWGAGSD 113
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG + + PR+IK + + I Q+SCG +H A++ +G+ +TWG S
Sbjct: 114 GQLGLTTIEDAVTVPRLIKKLNQ--------QTILQISCGNWHCLALAADGQFFTWGQNS 165
Query: 257 VGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
GQLG C Q+ P+RV +LDGI + VA GG HS AL+ GA++ WG + +G
Sbjct: 166 YGQLGLGKECPSQAS-----PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSG 220
Query: 314 QLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNS 373
QLGL + ES + + L+ V ++CG HT V + G + +G S
Sbjct: 221 QLGLSDERD------RESPCHVK----LLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 374 YGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
GQ ++ P V +G EV ++A G H+
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHT 306
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 93/204 (45%), Gaps = 14/204 (6%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A + WG N GQ G G+E + Q L G P +A G H+ A
Sbjct: 152 LAADGQFFTWGQNSYGQLGL-GKECPSQASPQRVKSLDGIPLA------QVAAGGAHSFA 204
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP--RE 134
++ G +F WG N GQLG E R+ P VK L+S+ V ISCG TA + +
Sbjct: 205 LSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVF 264
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGY 193
G S +L N N PR + + Q++CG H +A + G++ A+G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVN-PRRVLELM--GSEVSQIACGRHHTLAFVPSSGMIYAFGC 321
Query: 194 NEYGQLGRGITCEGLQGPRVIKGY 217
GQLG G TC ++ P +KG+
Sbjct: 322 GTRGQLGTGHTC-NVKCPSPVKGH 344
>gi|330796931|ref|XP_003286517.1| hypothetical protein DICPUDRAFT_97415 [Dictyostelium purpureum]
gi|325083498|gb|EGC36949.1| hypothetical protein DICPUDRAFT_97415 [Dictyostelium purpureum]
Length = 815
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 115/420 (27%), Positives = 191/420 (45%), Gaps = 63/420 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQL----PPELFGCPAGANSRWLDIACGHEHTAAVA 78
+Y WG +G+E QL +P+++ P L + R + +ACG+ H+ A+
Sbjct: 55 VYSWG---------RGKEGQLGVPEKMLFSTKPNLI--KTLLHERVVKVACGNFHSLALT 103
Query: 79 SDGTLFTWGANEFGQLGD---GTEE--------GRKHPEKVKQLQSEFVKSISCGAHCTA 127
G ++ WG + ++ D G E G P+ +++ + ++
Sbjct: 104 DQGRVYEWG--QLHKIDDSKTGLEATNGLLEMPGMSKPKYQSIIENSVSQYLNGEKEIYD 161
Query: 128 AIAEPRENDGTISTSRLWVWGQNQGSNFPRLF-WGAFTP--------NTIICQVSCGSVH 178
+ + ++D STS Q++G + ++ + TP N + +S G
Sbjct: 162 STSGNNDDDDEASTSE-----QSKGKHIGKIIDYNQTTPIQVQGLLANEEVIDISAGWAF 216
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
A+++ G + WG+NE GQLG P+++K LD KI VSCG
Sbjct: 217 SAAVTKSGKIFTWGFNEKGQLGLKHRWFN-SSPQLVKT---LLDV-----KIVSVSCGRQ 267
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA--LDGIFIKDVACGGVHSC 296
H AV+E+G++YTWGLG GQLGH +++S L P++V A L+GI + V+CG +
Sbjct: 268 HIGAVTEDGDLYTWGLGVFGQLGHSNVKS---YLHPKKVAAFSLNGIQVSQVSCGSNFTM 324
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP----NGVQLVAC 352
L LYA+G + QLG +T+ + D +F+ VV ++ V C
Sbjct: 325 VLGRNQILYAFGHGEYAQLGATEETQHLDM--GSRDNHFKYSSPKVVEALEDKKIKYVTC 382
Query: 353 GHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
GH HTL D ++ WG+ S G + P V G E+ ++AG HS ++
Sbjct: 383 GHLHTLALTEDNEVYVWGWGSSGCLGLNSKRFQLVPQLVTSISGEEISCISAGEKHSLIV 442
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 61/123 (49%), Gaps = 23/123 (18%)
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G N+ GQLG E L+ P+V+ E+ + + I S GE H+ VS G+VY+
Sbjct: 7 GNNKNGQLGIENIKEHLE-PKVL--------ESLKGKVIVSCSSGEAHNICVSRFGDVYS 57
Query: 252 WGLGSVGQLG------HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
WG G GQLG + + K LL RVV VACG HS ALT +G +Y
Sbjct: 58 WGRGKEGQLGVPEKMLFSTKPNLIKTLLHERVVK--------VACGNFHSLALTDQGRVY 109
Query: 306 AWG 308
WG
Sbjct: 110 EWG 112
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 12/122 (9%)
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
V + G GQLG +++ + L P+ + +L G I + G H+ ++ G +Y+WG
Sbjct: 3 VISVGNNKNGQLG---IENIKEHLEPKVLESLKGKVIVSCSSGEAHNICVSRFGDVYSWG 59
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHG 368
+ GQLG+ P+ FS PN T ++ V VACG+ H+L GR++
Sbjct: 60 RGKEGQLGV-PEKMLFSTKPNLIKT--------LLHERVVKVACGNFHSLALTDQGRVYE 110
Query: 369 WG 370
WG
Sbjct: 111 WG 112
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 168 IICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL 227
+I S G H + +S G + +WG + GQLG P +IK
Sbjct: 35 VIVSCSSGEAHNICVSRFGDVYSWGRGKEGQLGVPEKMLFSTKPNLIKTLLH-------- 86
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWG 253
E++ +V+CG +HS A+++ G VY WG
Sbjct: 87 ERVVKVACGNFHSLALTDQGRVYEWG 112
>gi|337749002|ref|YP_004643164.1| hypothetical protein KNP414_04764 [Paenibacillus mucilaginosus
KNP414]
gi|336300191|gb|AEI43294.1| hypothetical protein KNP414_04764 [Paenibacillus mucilaginosus
KNP414]
Length = 388
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 116/354 (32%), Positives = 160/354 (45%), Gaps = 61/354 (17%)
Query: 68 ACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTA 127
A G H+ + DGT++ WGAN QLGDGT+ R P VK L S V IS G +
Sbjct: 36 AGGTGHSLFLQKDGTVWAWGANSNAQLGDGTKTDRYSPIPVKNLDS--VIGISAGGAASF 93
Query: 128 AIAEPRENDGTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTI-----ICQVSCGS 176
A+ +DGT W WG N G+ + RL TP + + + GS
Sbjct: 94 AV----RSDGTA-----WAWGSNLFGQLGDGTTYDRL-----TPVQVQGLHSVVALEAGS 139
Query: 177 VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG 236
H +A+ G + AWG+N YGQLG G T + P ++ L+ + V+ G
Sbjct: 140 SHSLAVKADGSVWAWGWNTYGQLGDG-TTDSRSTPVQVQ----------ALDSVVAVAAG 188
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSC 296
HS AV +G V+ WG GQLG + + +P +V L + V+ G S
Sbjct: 189 SGHSLAVKADGSVWAWGANWSGQLGDGTYT---ESTVPVQVTGLGSVV--SVSAGNTFSS 243
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS- 355
AL S G ++AWG + +GQLG S+T N P V G+ A S
Sbjct: 244 ALKSDGTVWAWGANDSGQLG--------------SETAASNSPSPVQVTGMASAAAISSG 289
Query: 356 --HTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH 407
++L DG + WGYNS GQ N +T + P V +G V +AAG H
Sbjct: 290 SDYSLALKNDGTVWAWGYNSSGQLGNGTTTSSSAPVQVT-RLGSVVSVAAGPLH 342
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 145/325 (44%), Gaps = 50/325 (15%)
Query: 2 DINEIIGETARPVDNIPAKS--AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
+++ +IG +A + +S + WG N GQ G G P Q+ G
Sbjct: 78 NLDSVIGISAGGAASFAVRSDGTAWAWGSNLFGQLG-DGTTYDRLTPVQVQ--------G 128
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
+S + + G H+ AV +DG+++ WG N +GQLGDGT + R P +V+ L S V ++
Sbjct: 129 LHSV-VALEAGSSHSLAVKADGSVWAWGWNTYGQLGDGTTDSRSTPVQVQALDS--VVAV 185
Query: 120 SCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI---------IC 170
+ G+ + A+ + DG++ W WG N G +T +T+ +
Sbjct: 186 AAGSGHSLAV----KADGSV-----WAWGANWSGQLGD---GTYTESTVPVQVTGLGSVV 233
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
VS G+ AL G + AWG N+ GQLG P + G A + +
Sbjct: 234 SVSAGNTFSSALKSDGTVWAWGANDSGQLGSETAASNSPSPVQVTGMASAAAISSGSD-- 291
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
+S A+ +G V+ WG S GQLG+ + S P +V L + VA
Sbjct: 292 --------YSLALKNDGTVWAWGYNSSGQLGNGTTTSSSA---PVQVTRLGSVV--SVAA 338
Query: 291 GGVHSCALTSKGALYAWGGSQAGQL 315
G +H A+ S G ++ WG + GQL
Sbjct: 339 GPLHGLAVQSGGTVWDWGNNTYGQL 363
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 119/270 (44%), Gaps = 43/270 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +++ WG+N GQ G G P Q+ A + +A G H+ A
Sbjct: 145 VKADGSVWAWGWNTYGQLG-DGTTDSRSTPVQVQ---------ALDSVVAVAAGSGHSLA 194
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V +DG+++ WGAN GQLGDGT P +V L S V S+S G ++A+ ++D
Sbjct: 195 VKADGSVWAWGANWSGQLGDGTYTESTVPVQVTGLGS--VVSVSAGNTFSSAL----KSD 248
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVS---------CGSVHVVALSECGL 187
GT+ W WG N + +P+ + QV+ GS + +AL G
Sbjct: 249 GTV-----WAWGANDSGQLGSETAASNSPSPV--QVTGMASAAAISSGSDYSLALKNDGT 301
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWGYN GQLG G T +V + L + V+ G H AV G
Sbjct: 302 VWAWGYNSSGQLGNGTTTSSSAPVQVTR-----------LGSVVSVAAGPLHGLAVQSGG 350
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRV 277
V+ WG + GQLG G LP +V
Sbjct: 351 TVWDWGNNTYGQLGDGYFGGGYDRSLPFQV 380
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 102/238 (42%), Gaps = 31/238 (13%)
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G+ H + L + G + AWG N QLG G + P +K L+ + +S
Sbjct: 38 GTGHSLFLQKDGTVWAWGANSNAQLGDGTKTDRYS-PIPVK----------NLDSVIGIS 86
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVH 294
G S AV +G + WG GQLG + L P +V L + + G H
Sbjct: 87 AGGAASFAVRSDGTAWAWGSNLFGQLGDGTTY---DRLTPVQVQGLHSVVALE--AGSSH 141
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQLVACG 353
S A+ + G+++AWG + GQLG G T R+ P+ V + V VA G
Sbjct: 142 SLAVKADGSVWAWGWNTYGQLGDGT-------------TDSRSTPVQVQALDSVVAVAAG 188
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
H+L DG + WG N GQ + T + P V +G V ++AG S+ L
Sbjct: 189 SGHSLAVKADGSVWAWGANWSGQLGDGTYTESTVPVQVT-GLGSVVSVSAGNTFSSAL 245
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
G HS + ++G V+ WG S QLG + P V LD + ++ GG S
Sbjct: 38 GTGHSLFLQKDGTVWAWGANSNAQLGDGTKT---DRYSPIPVKNLDSVI--GISAGGAAS 92
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGH 354
A+ S G +AWG + GQLG G TY R P+ V + V + G
Sbjct: 93 FAVRSDGTAWAWGSNLFGQLGDGT-------------TYDRLTPVQVQGLHSVVALEAGS 139
Query: 355 SHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLAD 413
SH+L DG + WG+N+YGQ + + P V + V +AAG GHS AV AD
Sbjct: 140 SHSLAVKADGSVWAWGWNTYGQLGDGTTDSRSTPVQVQ-ALDSVVAVAAGSGHSLAVKAD 198
>gi|354584103|ref|ZP_09003000.1| Listeria/Bacterioides repeat-containing protein [Paenibacillus
lactis 154]
gi|353197365|gb|EHB62858.1| Listeria/Bacterioides repeat-containing protein [Paenibacillus
lactis 154]
Length = 1286
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 111/355 (31%), Positives = 163/355 (45%), Gaps = 53/355 (14%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ G+ HTA++ S G +++WG + GQLG+GT R P K L V + G T
Sbjct: 38 LVAGYYHTASLVSSGEVYSWGYGDRGQLGNGTWSARTTPVMAKGLN--HVIDVHTGVRST 95
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGS---------- 176
A+ +DGT+ W WG N+ +L G T + QVS S
Sbjct: 96 MAL----RSDGTV-----WTWGSNENG---QLGIGTVTDMNVPGQVSGLSGIKAVSGGLG 143
Query: 177 VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG 236
H +ALSE G + WG N+ G+LG G T + P + G L +T ++ G
Sbjct: 144 YHSMALSEDGSVWTWGKNDNGELGNGTTLQ-QNTPVQVAG----------LNDVTAIAAG 192
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSC 296
Y S A+ +G V+ WG+ G+LG + +P +V L + +A GG HS
Sbjct: 193 GYFSLALKSDGTVWAWGVNGDGELGDGTTT---DRYVPVQVAGLTDVMA--IAAGGSHSL 247
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+T G ++AWG + G LG G TR+ P + +N+ +V VA G H
Sbjct: 248 AVTQDGTVWAWGKNTYGTLGDG--TRTNRTRPVQ----IKNLQHIVA------VAGGGYH 295
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
+L R G + WG NS Q + + P PV + VR++AAGG HS +
Sbjct: 296 SLALDRTGNVWSWGDNSQRQLGVGSNASSLIPVPVS-GIEHVREIAAGGFHSVAM 349
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 170/374 (45%), Gaps = 56/374 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WGY GQ G G P A + +D+ G T A+ SDGT
Sbjct: 54 VYSWGYGDRGQLG-NGTWSARTTP---------VMAKGLNHVIDVHTGVRSTMALRSDGT 103
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGTIST 141
++TWG+NE GQLG GT P +V L +K++S G + + A++E DG++
Sbjct: 104 VWTWGSNENGQLGIGTVTDMNVPGQVSGLSG--IKAVSGGLGYHSMALSE----DGSV-- 155
Query: 142 SRLWVWGQNQGSNFPR-LFWGAFTPNTI-----ICQVSCGSVHVVALSECGLLQAWGYNE 195
W WG+N TP + + ++ G +AL G + AWG N
Sbjct: 156 ---WTWGKNDNGELGNGTTLQQNTPVQVAGLNDVTAIAAGGYFSLALKSDGTVWAWGVNG 212
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
G+LG G T + P + G L + ++ G HS AV+++G V+ WG
Sbjct: 213 DGELGDGTTTDRYV-PVQVAG----------LTDVMAIAAGGSHSLAVTQDGTVWAWGKN 261
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
+ G LG G + R V + I VA GG HS AL G +++WG + QL
Sbjct: 262 TYGTLG-----DGTRTNRTRPVQIKNLQHIVAVAGGGYHSLALDRTGNVWSWGDNSQRQL 316
Query: 316 GLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
G+G + + SLIP +P+ + + V+ +A G H++ +DG + GWG+N G
Sbjct: 317 GVG--SNASSLIP---------VPVSGIEH-VREIAAGGFHSVAMKKDGTVWGWGFNGGG 364
Query: 376 QAANEKSTYAWYPS 389
Q + S+ P+
Sbjct: 365 QLGDGTSSTRDTPT 378
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 120/266 (45%), Gaps = 44/266 (16%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+++ WG N +G+ G G Q P Q+ AG N IA G + A+ SDG
Sbjct: 154 SVWTWGKNDNGELG-NGTTLQQNTPVQV--------AGLNDV-TAIAAGGYFSLALKSDG 203
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
T++ WG N G+LGDGT R P +V L V +I+ G + A+ + DGT+
Sbjct: 204 TVWAWGVNGDGELGDGTTTDRYVPVQVAGLTD--VMAIAAGGSHSLAVTQ----DGTV-- 255
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPNTI---------ICQVSCGSVHVVALSECGLLQAWG 192
W WG+N + L G T T I V+ G H +AL G + +WG
Sbjct: 256 ---WAWGKN---TYGTLGDGTRTNRTRPVQIKNLQHIVAVAGGGYHSLALDRTGNVWSWG 309
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
N QLG G L P + G +E + +++ G +HS A+ ++G V+ W
Sbjct: 310 DNSQRQLGVGSNASSLI-PVPVSG----------IEHVREIAAGGFHSVAMKKDGTVWGW 358
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVV 278
G GQLG + + D L + V+
Sbjct: 359 GFNGGGQLGDGTSSTRDTPTLTKAVL 384
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 110/240 (45%), Gaps = 32/240 (13%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
++ G H +L G + +WGY + GQLG G T P + KG L +
Sbjct: 37 KLVAGYYHTASLVSSGEVYSWGYGDRGQLGNG-TWSARTTPVMAKG----------LNHV 85
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
V G + A+ +G V+TWG GQLG ++ + +P +V L G IK V+
Sbjct: 86 IDVHTGVRSTMALRSDGTVWTWGSNENGQLGIGTVTDMN---VPGQVSGLSG--IKAVSG 140
Query: 291 G-GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV-PNGVQ 348
G G HS AL+ G+++ WG + G+LG G T +N P+ V N V
Sbjct: 141 GLGYHSMALSEDGSVWTWGKNDNGELGNG-------------TTLQQNTPVQVAGLNDVT 187
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
+A G +L DG + WG N G+ + +T + P V + +V +AAGG HS
Sbjct: 188 AIAAGGYFSLALKSDGTVWAWGVNGDGELGDGTTTDRYVPVQVA-GLTDVMAIAAGGSHS 246
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 93/209 (44%), Gaps = 31/209 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N G+ G G +P Q+ AG + IA G H+ AV DGT
Sbjct: 205 VWAWGVNGDGELG-DGTTTDRYVPVQV--------AGLTDV-MAIAAGGSHSLAVTQDGT 254
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG N +G LGDGT R P ++K LQ + +++ G + + A+ T
Sbjct: 255 VWAWGKNTYGTLGDGTRTNRTRPVQIKNLQ--HIVAVAGGGYHSLALDR---------TG 303
Query: 143 RLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
+W WG N GSN L + + +++ G H VA+ + G + WG+N
Sbjct: 304 NVWSWGDNSQRQLGVGSNASSLIPVPVSGIEHVREIAAGGFHSVAMKKDGTVWGWGFNGG 363
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAP 225
GQLG G T P + K LD P
Sbjct: 364 GQLGDG-TSSTRDTPTLTKA---VLDTTP 388
>gi|325180310|emb|CCA14713.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 393
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 154/312 (49%), Gaps = 38/312 (12%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQ-LRIP-KQLPPELFGCPAGANSRWLDIACGHEHT 74
+ +S ++ WG GQ G E+ +R ++L P + G N LD G H+
Sbjct: 1 MSTQSTVFTWGTGTQGQLGHGSFEKTGIRSSYEELSPRILETFEGKNIAKLDF--GATHS 58
Query: 75 AAVASDGTLFTWGANEFGQLGDGT--EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
AA+ +G L+TWG+NE+ QLG G+ ++ + P V L+ + ISCG + T A+ E
Sbjct: 59 AAIDKEGKLYTWGSNEYHQLGHGSSNQDIQSIPRVVDALRGIKIVDISCGEYHTGAVDE- 117
Query: 133 RENDGTISTSRLWVWGQN-------------QGSNFPRLFWGAFTPNTIICQVSCGSVHV 179
+G + T W WG + + + PRL + V CG +H
Sbjct: 118 ---EGKLFT---WGWGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGVPVKSVECGELHT 171
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
VAL++ G + AWG EYG+LG G + + + P ++ +A E I +S G
Sbjct: 172 VALTKDGEIWAWGNGEYGRLGNGAS-DNFEVPEPVEYFAD--------ENIASISAGRDF 222
Query: 240 SAAVSENGEVYTWGLGSVGQL---GHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSC 296
+ A++E+GEVY+WG+ S QL G ++ + E +P V AL + + V+ G H+
Sbjct: 223 TFAITEHGEVYSWGINSHSQLGLGGGLTVDYYNMETIPVVVEALSNVNVAQVSAGYDHAA 282
Query: 297 ALTSKGALYAWG 308
A+T+ G ++ WG
Sbjct: 283 AVTNDGKMFMWG 294
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 136/308 (44%), Gaps = 74/308 (24%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+++ T+FTWG GQLG G+ E ++L +++
Sbjct: 1 MSTQSTVFTWGTGTQGQLGHGSFEKTGIRSSYEELSPRILETF----------------- 43
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
+G N +L +GA H A+ + G L WG NEY
Sbjct: 44 --------------EGKNIAKLDFGA--------------THSAAIDKEGKLYTWGSNEY 75
Query: 197 GQLGRGITCEGLQG-PRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
QLG G + + +Q PRV+ +A KI +SCGEYH+ AV E G+++TWG G
Sbjct: 76 HQLGHGSSNQDIQSIPRVV--------DALRGIKIVDISCGEYHTGAVDEEGKLFTWGWG 127
Query: 256 -----SVGQLGHCSLQSGDKELLPRRVVAL--DGIFIKDVACGGVHSCALTSKGALYAWG 308
G LGH G+ E +PR V L G+ +K V CG +H+ ALT G ++AWG
Sbjct: 128 GSTMKGSGALGHA---GGEDESIPRLVRTLVDQGVPVKSVECGELHTVALTKDGEIWAWG 184
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHG 368
+ G+LG G + +F +P E YF + + ++ G T G ++
Sbjct: 185 NGEYGRLGNGA-SDNFE-VP-EPVEYFAD-------ENIASISAGRDFTFAITEHGEVYS 234
Query: 369 WGYNSYGQ 376
WG NS+ Q
Sbjct: 235 WGINSHSQ 242
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 113/234 (48%), Gaps = 26/234 (11%)
Query: 182 LSECGLLQAWGYNEYGQLGRG-ITCEGLQG------PRVIKGYAKFLDEAPELEKITQVS 234
+S + WG GQLG G G++ PR+++ + E + I ++
Sbjct: 1 MSTQSTVFTWGTGTQGQLGHGSFEKTGIRSSYEELSPRILETF--------EGKNIAKLD 52
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVH 294
G HSAA+ + G++YTWG QLGH S + D + +PR V AL GI I D++CG H
Sbjct: 53 FGATHSAAIDKEGKLYTWGSNEYHQLGHGS-SNQDIQSIPRVVDALRGIKIVDISCGEYH 111
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV---VPNGVQLVA 351
+ A+ +G L+ WG + G G + E ++ R + LV VP V+ V
Sbjct: 112 TGAVDEEGKLFTWGWGGSTMKGSG----ALGHAGGEDESIPRLVRTLVDQGVP--VKSVE 165
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAG 404
CG HT+ +DG I WG YG+ N S P PV++ E + ++AG
Sbjct: 166 CGELHTVALTKDGEIWAWGNGEYGRLGNGASDNFEVPEPVEYFADENIASISAG 219
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 137/339 (40%), Gaps = 77/339 (22%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I + +Y WG N Q G + ++ ++ L G + +DI+CG HT A
Sbjct: 61 IDKEGKLYTWGSNEYHQLGHGSSNQDIQSIPRVVDALRGI------KIVDISCGEYHTGA 114
Query: 77 VASDGTLFTWG-----ANEFGQLGDGTEEGRKHPEKVKQL--QSEFVKSISCGAHCTAAI 129
V +G LFTWG G LG E P V+ L Q VKS+ CG T A+
Sbjct: 115 VDEEGKLFTWGWGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGVPVKSVECGELHTVAL 174
Query: 130 AEPRENDGTISTSRLWVWGQNQGSNFPRLFWGA-----------FTPNTIICQVSCGSVH 178
+ E +W WG + + RL GA + + I +S G
Sbjct: 175 TKDGE---------IWAWGNGE---YGRLGNGASDNFEVPEPVEYFADENIASISAGRDF 222
Query: 179 VVALSECGLLQAWGYNEYGQLGRG--------------ITCEGLQGPRVIK---GY---- 217
A++E G + +WG N + QLG G + E L V + GY
Sbjct: 223 TFAITEHGEVYSWGINSHSQLGLGGGLTVDYYNMETIPVVVEALSNVNVAQVSAGYDHAA 282
Query: 218 ------------AKFLDEAPEL-----EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQL 260
AK E E+ E I V CG Y++AA+S +G ++T+G G L
Sbjct: 283 AVTNDGKMFMWGAKLWLEPHEMTILKDETIISVQCGRYYTAALSASGNLFTFGKGHSNCL 342
Query: 261 GHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT 299
GH ++ +L P V +L+ + + CG H ALT
Sbjct: 343 GHGERKT---QLQPLLVESLNRYNVVSMTCGYSHMGALT 378
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 2/106 (1%)
Query: 27 GYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTW 86
GY+H+ G+ L P + + + CG +TAA+++ G LFT+
Sbjct: 277 GYDHAAAVTNDGKMFMWGAKLWLEPHEMTILK--DETIISVQCGRYYTAALSASGNLFTF 334
Query: 87 GANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
G LG G + + P V+ L V S++CG A+ +P
Sbjct: 335 GKGHSNCLGHGERKTQLQPLLVESLNRYNVVSMTCGYSHMGALTKP 380
>gi|339010099|ref|ZP_08642670.1| copper amine oxidase domain protein [Brevibacillus laterosporus LMG
15441]
gi|338773369|gb|EGP32901.1| copper amine oxidase domain protein [Brevibacillus laterosporus LMG
15441]
Length = 392
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/345 (31%), Positives = 163/345 (47%), Gaps = 43/345 (12%)
Query: 56 CPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGD-GTEEGRKHPEKVKQLQSE 114
P S L + G HT A+ DGT++TWG + +G+LG+ + K P VK L
Sbjct: 77 VPVDDLSDVLMVDTGTSHTVALQKDGTVWTWGWSAYGELGNEKAKSTEKTPHHVKWLSD- 135
Query: 115 FVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTI 168
VK + G + T A+ E DGT+ W +G+N+ G+ R+ + T
Sbjct: 136 -VKQVRAGENFTLALKE----DGTV-----WAFGKNRSGQLGDGTTETRVKPVQVSGLTD 185
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I + G +ALSE G + AWG N GQLG G + LQ +V EL
Sbjct: 186 IVAIDAGEEFSLALSEDGTVWAWGNNSVGQLGNGTREKALQPVQV-----------SELT 234
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF-IKD 287
+ +S GE AV+ NG+VY WG G+LG + +S + +L +DGI+ +
Sbjct: 235 DVIAISTGEKQGYAVTSNGDVYGWGYNQ-GKLGDGTNKSRNSPVL------IDGIYDVIA 287
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
V G H+ AL G ++AWG + GQLG G ++S+ PN+ + + L N +
Sbjct: 288 VDSGKQHTLALKEDGTVWAWGTNTHGQLGYGTPV-NYSMTPNQ--VFLESTEPL---NQI 341
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVD 392
+ G H+ +DG + WG+NS G+ S YP+ ++
Sbjct: 342 VAIDAGGFHSHAIKKDGTVWSWGFNSNGELGLGHSKKQMYPAKIE 386
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 124/269 (46%), Gaps = 42/269 (15%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++ +G N SGQ G E +++ P ++ G + + I G E + A++ DG
Sbjct: 154 TVWAFGKNRSGQLGDGTTETRVK-----PVQVSGL-----TDIVAIDAGEEFSLALSEDG 203
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
T++ WG N GQLG+GT E P +V +L V +IS G A+ S
Sbjct: 204 TVWAWGNNSVGQLGNGTREKALQPVQVSELTD--VIAISTGEKQGYAVT---------SN 252
Query: 142 SRLWVWGQNQGS---------NFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
++ WG NQG N P L G + + V G H +AL E G + AWG
Sbjct: 253 GDVYGWGYNQGKLGDGTNKSRNSPVLIDGIYD----VIAVDSGKQHTLALKEDGTVWAWG 308
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
N +GQLG G P + FL+ L +I + G +HS A+ ++G V++W
Sbjct: 309 TNTHGQLGYGTPVNYSMTPNQV-----FLESTEPLNQIVAIDAGGFHSHAIKKDGTVWSW 363
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALD 281
G S G+LG L K++ P ++ ++
Sbjct: 364 GFNSNGELG---LGHSKKQMYPAKIETIN 389
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 141/312 (45%), Gaps = 55/312 (17%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLD----IACGHEHTAAV 77
++ WG++ G+ G + + + P + +WL + G T A+
Sbjct: 103 TVWTWGWSAYGELGNEKAKSTEKTPHHV-------------KWLSDVKQVRAGENFTLAL 149
Query: 78 ASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG 137
DGT++ +G N GQLGDGT E R P +V L + +I G + A++E DG
Sbjct: 150 KEDGTVWAFGKNRSGQLGDGTTETRVKPVQVSGLTD--IVAIDAGEEFSLALSE----DG 203
Query: 138 TISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
T+ W WG N G+ L + T + +S G A++ G + W
Sbjct: 204 TV-----WAWGNNSVGQLGNGTREKALQPVQVSELTDVIAISTGEKQGYAVTSNGDVYGW 258
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
GYN+ G+LG G T + P +I G + + V G+ H+ A+ E+G V+
Sbjct: 259 GYNQ-GKLGDG-TNKSRNSPVLIDG----------IYDVIAVDSGKQHTLALKEDGTVWA 306
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVV-----ALDGIFIKDVACGGVHSCALTSKGALYA 306
WG + GQLG+ + + + P +V L+ I D GG HS A+ G +++
Sbjct: 307 WGTNTHGQLGYGT--PVNYSMTPNQVFLESTEPLNQIVAID--AGGFHSHAIKKDGTVWS 362
Query: 307 WGGSQAGQLGLG 318
WG + G+LGLG
Sbjct: 363 WGFNSNGELGLG 374
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 82/193 (42%), Gaps = 18/193 (9%)
Query: 200 GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ 259
G G G+ G +KG +L + V G H+ A+ ++G V+TWG + G+
Sbjct: 55 GTGSDANGVLGSSSVKGKTTSPVPVDDLSDVLMVDTGTSHTVALQKDGTVWTWGWSAYGE 114
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LG+ +S +K P V L +K V G + AL G ++A+G +++GQLG G
Sbjct: 115 LGNEKAKSTEKT--PHHVKWLSD--VKQVRAGENFTLALKEDGTVWAFGKNRSGQLGDGT 170
Query: 320 QTRSFSLIPNESDTYFRNIPILVV-PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
T R P+ V + + G +L DG + WG NS GQ
Sbjct: 171 -------------TETRVKPVQVSGLTDIVAIDAGEEFSLALSEDGTVWAWGNNSVGQLG 217
Query: 379 NEKSTYAWYPSPV 391
N A P V
Sbjct: 218 NGTREKALQPVQV 230
>gi|444917133|ref|ZP_21237237.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444711259|gb|ELW52206.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 1081
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/361 (30%), Positives = 162/361 (44%), Gaps = 54/361 (14%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFT 85
WG N SGQ G G +P ++P G +A G H +DG+++
Sbjct: 373 WGANGSGQLG-NGSSSVRALPGRVPSLTAGA---------SLAAGDHHVFLRQADGSVWA 422
Query: 86 WGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLW 145
WG N +GQLGDGT R P ++ + V+++S ++ + A+ +DGT+ W
Sbjct: 423 WGDNTYGQLGDGTLVSRPAPVRLSSTLTS-VRALSASSYHSLAL----RSDGTV-----W 472
Query: 146 VWGQNQGSNFPRLFWG-----AFTPNTI-ICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
WG N G A P +++ G+ H +AL G + WG N YGQL
Sbjct: 473 AWGDNAYGQLGDTSGGRRPSPAQVPGVAGATEIAAGTYHSLALRSDGTVWTWGDNSYGQL 532
Query: 200 GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ 259
G G T G + P V+ P L IT V+ G +HS A+ +G+V+ WG GQ
Sbjct: 533 GAGATPRGPRAPAVV----------PGLAVITHVAAGLFHSLALDSSGQVWAWGDNVYGQ 582
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LG S S + +P RV L I+ + G +S AL + G+++ WG + GQLG
Sbjct: 583 LGDGSTTSRN---VPGRVSGLP-AGIQAIVAGPSYSVALGADGSVWTWGENSNGQLG--- 635
Query: 320 QTRSFSLIPNESDTYFRNIPILV-VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
+ T R +P V +P + ++ SHT+ G + WG N GQ
Sbjct: 636 ----------DGTTTARPVPARVSLPATLVALSTRGSHTVALDTTGMLWAWGRNVSGQLG 685
Query: 379 N 379
N
Sbjct: 686 N 686
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 115/383 (30%), Positives = 166/383 (43%), Gaps = 66/383 (17%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+++ WG N QT + G Q R+P ++ S +ACG+ + D
Sbjct: 319 SVWAWGDNAQAQTAQTGTSVQ-RVPVRVS---------GVSDAQALACGNAFSLVGRGDN 368
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
WGAN GQLG+G+ R P +V L + S++ G H R+ DG++
Sbjct: 369 VTLGWGANGSGQLGNGSSSVRALPGRVPSLTAG--ASLAAGDHHVFL----RQADGSV-- 420
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPN----------TIICQVSCGSVHVVALSECGLLQAW 191
W WG N + +L G T + +S S H +AL G + AW
Sbjct: 421 ---WAWGDN---TYGQLGDGTLVSRPAPVRLSSTLTSVRALSASSYHSLALRSDGTVWAW 474
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G N YGQLG G + P + T+++ G YHS A+ +G V+T
Sbjct: 475 GDNAYGQLGD-----------TSGGRRPSPAQVPGVAGATEIAAGTYHSLALRSDGTVWT 523
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGI-FIKDVACGGVHSCALTSKGALYAWGGS 310
WG S GQLG + G PR + G+ I VA G HS AL S G ++AWG +
Sbjct: 524 WGDNSYGQLGAGATPRG-----PRAPAVVPGLAVITHVAAGLFHSLALDSSGQVWAWGDN 578
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGRIHG 368
GQLG + T RN+P V +P G+Q + G S+++ DG +
Sbjct: 579 VYGQLG-------------DGSTTSRNVPGRVSGLPAGIQAIVAGPSYSVALGADGSVWT 625
Query: 369 WGYNSYGQAANEKSTYAWYPSPV 391
WG NS GQ + +T P+ V
Sbjct: 626 WGENSNGQLGDGTTTARPVPARV 648
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 117/369 (31%), Positives = 166/369 (44%), Gaps = 66/369 (17%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A ++ WG N GQ G +P + G P R + +A G +H AV+
Sbjct: 719 ADGTVWAWGDNSLGQLGNGATS-----ASPVPVQAVGYP-----RTVPLASGAQHVLAVS 768
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
SDG++F++G+N GQLG EG + L E +++++ GA + A+ DG
Sbjct: 769 SDGSVFSFGSNSRGQLG---YEGSATQTSPRWLTGPECIEAVAAGALFSLAL----SCDG 821
Query: 138 TISTSRLWVWGQNQGSNFPRLFWGAFTPNTI---------ICQVSCGSVHVVALSECGLL 188
+ W WG N GS +L GA T T + ++ GS H +A+ G +
Sbjct: 822 GV-----WAWGDN-GSG--QLGDGAVTARTAPARVPGLAHVVAIAAGSDHALAVRADGTV 873
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
AWG N GQLG G T R + K EL + V+ G HS AV +G
Sbjct: 874 WAWGANGSGQLGDGTTTS-----RAVPMQVK------ELVDVVAVAGGSGHSLAVRADGT 922
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
V+ WG GQLG + S LP V L G ++ +A G HS AL G ++AWG
Sbjct: 923 VWAWGANGSGQLGDGTTTS---RTLPVFVSTLSG--VQAIASGAQHSLALAEGGVVWAWG 977
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIH 367
+ +GQLG G T R P+ V +GVQ + G S +L + G++
Sbjct: 978 ANGSGQLGDGTTTS-------------RTRPVQVSGLSGVQGLVAGASFSLA-LTPGKVW 1023
Query: 368 GWGYNSYGQ 376
WG NS GQ
Sbjct: 1024 SWGNNSAGQ 1032
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 122/396 (30%), Positives = 169/396 (42%), Gaps = 77/396 (19%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G +G Q P Q+ L G A +A G+ H+ A+ +GT
Sbjct: 69 VWAWGANAQGQLG-EGSTLQHSTPTQVV-GLTGVTA--------VAAGNTHSMALREEGT 118
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGTIST 141
++TWG N GQLGDG + R P +V L V +I+ G H A I
Sbjct: 119 VWTWGTNTDGQLGDGVSQ-RSVPAQVAGLTG--VTAIAAGNLHSLALI-----------N 164
Query: 142 SRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNE 195
+W WG N GS+ R T + ++ G H +AL G + AWG N
Sbjct: 165 GAVWAWGNNTTGQLGDGSSTSRSTPAKVAGLTEVVAIAAGDFHSLALKRDGTVWAWGGNY 224
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN---GEVYTW 252
GQLG G T + P + G L I ++ G HS A S G+V+ W
Sbjct: 225 SGQLGDG-TLDSRSTPVRVSG----------LTGIVALAGGGSHSVAASSTTLGGKVWAW 273
Query: 253 GLGSVGQLGHCSLQSGD-KELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
G + GQLG+ GD LLP V L + +A G HS AL +++AWG +
Sbjct: 274 GDNTYGQLGN----GGDVSSLLPLEVPGLTQVVA--LASGTSHSLALRGDDSVWAWGDNA 327
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV---QLVACGHSHTLVYMRDGRIHG 368
Q ++ T + +P+ V +GV Q +ACG++ +LV D G
Sbjct: 328 QAQTA-------------QTGTSVQRVPVRV--SGVSDAQALACGNAFSLVGRGDNVTLG 372
Query: 369 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAG 404
WG N GQ N S+ P G V L AG
Sbjct: 373 WGANGSGQLGNGSSSVRALP-------GRVPSLTAG 401
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 122/444 (27%), Positives = 182/444 (40%), Gaps = 96/444 (21%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQ--LPPELFGCPAGANSRWLDIACGHEHTAA 76
A +++ WG N +GQ G G +P + LP L + ++ HT A
Sbjct: 619 ADGSVWTWGENSNGQLG-DGTTTARPVPARVSLPATL-----------VALSTRGSHTVA 666
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ + G L+ WG N GQLG+GT P +V V+ + G T A+ D
Sbjct: 667 LDTTGMLWAWGRNVSGQLGNGTLVSESTPRRVPSF--ARVQGFASGLRTTFAL----RAD 720
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQ---------VSCGSVHVVALSECGL 187
GT+ W WG N + +L GA + + + Q ++ G+ HV+A+S G
Sbjct: 721 GTV-----WAWGDN---SLGQLGNGATSASPVPVQAVGYPRTVPLASGAQHVLAVSSDGS 772
Query: 188 LQAWGYNEYGQLG-----RGITCEGLQGPRVIK------------------------GYA 218
+ ++G N GQLG + L GP I+ G
Sbjct: 773 VFSFGSNSRGQLGYEGSATQTSPRWLTGPECIEAVAAGALFSLALSCDGGVWAWGDNGSG 832
Query: 219 KFLDEA----------PELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSG 268
+ D A P L + ++ G H+ AV +G V+ WG GQLG + S
Sbjct: 833 QLGDGAVTARTAPARVPGLAHVVAIAAGSDHALAVRADGTVWAWGANGSGQLGDGTTTS- 891
Query: 269 DKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIP 328
+P +V L + + VA G HS A+ + G ++AWG + +GQLG G T
Sbjct: 892 --RAVPMQVKEL--VDVVAVAGGSGHSLAVRADGTVWAWGANGSGQLGDGTTTS------ 941
Query: 329 NESDTYFRNIPILV-VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWY 387
R +P+ V +GVQ +A G H+L G + WG N GQ + +T
Sbjct: 942 -------RTLPVFVSTLSGVQAIASGAQHSLALAEGGVVWAWGANGSGQLGDGTTTSRTR 994
Query: 388 PSPVDWCVGEVRKLAAGGGHSAVL 411
P V G V+ L AG S L
Sbjct: 995 PVQVSGLSG-VQGLVAGASFSLAL 1017
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 110/354 (31%), Positives = 157/354 (44%), Gaps = 53/354 (14%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+A G H+ V GT++ WGAN GQLG+G+ P +V L V +++ G +
Sbjct: 53 LAAGLNHSLYVTPAGTVWAWGANAQGQLGEGSTLQHSTPTQVVGLTG--VTAVAAGNTHS 110
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNF-----PRLFWGAFTPNTIICQVSCGSVHVVA 181
A+ E +GT+ W WG N R T + ++ G++H +A
Sbjct: 111 MALRE----EGTV-----WTWGTNTDGQLGDGVSQRSVPAQVAGLTGVTAIAAGNLHSLA 161
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
L G + AWG N GQLG G + P + G L ++ ++ G++HS
Sbjct: 162 LIN-GAVWAWGNNTTGQLGDGSSTS-RSTPAKVAG----------LTEVVAIAAGDFHSL 209
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A+ +G V+ WG GQLG +L D P RV L GI +A GG HS A +S
Sbjct: 210 ALKRDGTVWAWGGNYSGQLGDGTL---DSRSTPVRVSGLTGIVA--LAGGGSHSVAASST 264
Query: 302 ---GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSH 356
G ++AWG + GQLG G SL+P E VP Q+V A G SH
Sbjct: 265 TLGGKVWAWGDNTYGQLGNGGDVS--SLLPLE------------VPGLTQVVALASGTSH 310
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAV 410
+L D + WG N+ Q A ++ P V V + + LA G S V
Sbjct: 311 SLALRGDDSVWAWGDNAQAQTAQTGTSVQRVPVRVS-GVSDAQALACGNAFSLV 363
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 119/401 (29%), Positives = 169/401 (42%), Gaps = 66/401 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G +R +P Q+ L G A IA G+ H+ A+ +G
Sbjct: 119 VWTWGTNTDGQLGDGVSQRS--VPAQV-AGLTGVTA--------IAAGNLHSLALI-NGA 166
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG N GQLGDG+ R P KV L V +I+ G + A+ + DGT+
Sbjct: 167 VWAWGNNTTGQLGDGSSTSRSTPAKVAGLTE--VVAIAAGDFHSLAL----KRDGTV--- 217
Query: 143 RLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC---GLLQAWGY 193
W WG N G+ R + T I ++ G H VA S G + AWG
Sbjct: 218 --WAWGGNYSGQLGDGTLDSRSTPVRVSGLTGIVALAGGGSHSVAASSTTLGGKVWAWGD 275
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
N YGQLG G L E P L ++ ++ G HS A+ + V+ WG
Sbjct: 276 NTYGQLGNGGDVSSL-----------LPLEVPGLTQVVALASGTSHSLALRGDDSVWAWG 324
Query: 254 LGSVGQLGHCSLQSGDK-ELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
+ Q + Q+G + +P RV + + +ACG S WG + +
Sbjct: 325 DNAQAQ----TAQTGTSVQRVPVRVSGVS--DAQALACGNAFSLVGRGDNVTLGWGANGS 378
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYN 372
GQLG G + S +P +P L G L A H H + DG + WG N
Sbjct: 379 GQLGNG--SSSVRALPGR-------VPSLTA--GASLAAGDH-HVFLRQADGSVWAWGDN 426
Query: 373 SYGQAANEKSTYAWYPSPVDW--CVGEVRKLAAGGGHSAVL 411
+YGQ + T P+PV + VR L+A HS L
Sbjct: 427 TYGQLGD--GTLVSRPAPVRLSSTLTSVRALSASSYHSLAL 465
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 163/395 (41%), Gaps = 53/395 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G G L LP E+ G ++ + +A G H+ A+ D +
Sbjct: 270 VWAWGDNTYGQLGNGGDVSSL-----LPLEVPGL-----TQVVALASGTSHSLALRGDDS 319
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG N Q ++ P +V + ++++CG A R ++ T+
Sbjct: 320 VWAWGDNAQAQTAQTGTSVQRVPVRVSGVSDA--QALACG---NAFSLVGRGDNVTLG-- 372
Query: 143 RLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
WG N GS+ R G T ++ G HV G + AWG N Y
Sbjct: 373 ----WGANGSGQLGNGSSSVRALPGRVPSLTAGASLAAGDHHVFLRQADGSVWAWGDNTY 428
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG G R+ + L + +S YHS A+ +G V+ WG +
Sbjct: 429 GQLGDGTLVSRPAPVRL----------SSTLTSVRALSASSYHSLALRSDGTVWAWGDNA 478
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
GQLG S G + P +V + G ++A G HS AL S G ++ WG + GQLG
Sbjct: 479 YGQLGDTS---GGRRPSPAQVPGVAGA--TEIAAGTYHSLALRSDGTVWTWGDNSYGQLG 533
Query: 317 LGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
G R P +P L V + VA G H+L G++ WG N YGQ
Sbjct: 534 AGATPRG----PRAPAV----VPGLAV---ITHVAAGLFHSLALDSSGQVWAWGDNVYGQ 582
Query: 377 AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
+ +T P V ++ + AG +S L
Sbjct: 583 LGDGSTTSRNVPGRVSGLPAGIQAIVAGPSYSVAL 617
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 136/292 (46%), Gaps = 44/292 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N SGQ G G P ++P + + IA G +H AV +DGT
Sbjct: 823 VWAWGDNGSGQLG-DGAVTARTAPARVP---------GLAHVVAIAAGSDHALAVRADGT 872
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WGAN GQLGDGT R P +VK+L V +++ G+ + A+ DGT+
Sbjct: 873 VWAWGANGSGQLGDGTTTSRAVPMQVKELVD--VVAVAGGSGHSLAV----RADGTV--- 923
Query: 143 RLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
W WG N G+ R + + + ++ G+ H +AL+E G++ AWG N
Sbjct: 924 --WAWGANGSGQLGDGTTTSRTLPVFVSTLSGVQAIASGAQHSLALAEGGVVWAWGANGS 981
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG G T + P + G L + + G S A++ G+V++WG S
Sbjct: 982 GQLGDGTTTSRTR-PVQVSG----------LSGVQGLVAGASFSLALTP-GKVWSWGNNS 1029
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
GQLG +L S + P L F+ ++ G H+ L S + +WG
Sbjct: 1030 AGQLGDGTLNSRSQ---PGAGPTLSS-FVA-LSAGAQHTVVLRSDDSFLSWG 1076
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 159/402 (39%), Gaps = 83/402 (20%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A++ WG N +GQ G + P ++ G + + IA G H+ A+ DG
Sbjct: 166 AVWAWGNNTTGQLGDGSSTS-----RSTPAKVAGL-----TEVVAIAAGDFHSLALKRDG 215
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
T++ WG N GQLGDGT + R P +V L + V G+H AA + T
Sbjct: 216 TVWAWGGNYSGQLGDGTLDSRSTPVRVSGL-TGIVALAGGGSHSVAASS-------TTLG 267
Query: 142 SRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNE 195
++W WG N G + L T + ++ G+ H +AL + AWG N
Sbjct: 268 GKVWAWGDNTYGQLGNGGDVSSLLPLEVPGLTQVVALASGTSHSLALRGDDSVWAWGDNA 327
Query: 196 YGQLGR-GITCEGL-----------------------QGPRVIKGYA------------- 218
Q + G + + + +G V G+
Sbjct: 328 QAQTAQTGTSVQRVPVRVSGVSDAQALACGNAFSLVGRGDNVTLGWGANGSGQLGNGSSS 387
Query: 219 --KFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRR 276
P L ++ G++H +G V+ WG + GQLG +L S P R
Sbjct: 388 VRALPGRVPSLTAGASLAAGDHHVFLRQADGSVWAWGDNTYGQLGDGTLVS---RPAPVR 444
Query: 277 VVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG--LGPQTRSFSLIPNESDTY 334
+ + ++ ++ HS AL S G ++AWG + GQLG G + S + +P +
Sbjct: 445 LSSTL-TSVRALSASSYHSLALRSDGTVWAWGDNAYGQLGDTSGGRRPSPAQVPGVA--- 500
Query: 335 FRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
G +A G H+L DG + WG NSYGQ
Sbjct: 501 -----------GATEIAAGTYHSLALRSDGTVWTWGDNSYGQ 531
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 112/248 (45%), Gaps = 34/248 (13%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
+++ G H + ++ G + AWG N GQLG G T + +V+ L +
Sbjct: 52 RLAAGLNHSLYVTPAGTVWAWGANAQGQLGEGSTLQHSTPTQVVG-----------LTGV 100
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
T V+ G HS A+ E G V+TWG + GQLG Q +P +V L G + +A
Sbjct: 101 TAVAAGNTHSMALREEGTVWTWGTNTDGQLGDGVSQ----RSVPAQVAGLTG--VTAIAA 154
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQL 349
G +HS AL GA++AWG + GQLG G T R+ P V V
Sbjct: 155 GNLHSLALI-NGAVWAWGNNTTGQLGDGSSTS-------------RSTPAKVAGLTEVVA 200
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
+A G H+L RDG + WG N GQ + P V G V LA GG HS
Sbjct: 201 IAAGDFHSLALKRDGTVWAWGGNYSGQLGDGTLDSRSTPVRVSGLTGIV-ALAGGGSHS- 258
Query: 410 VLADACSL 417
V A + +L
Sbjct: 259 VAASSTTL 266
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 107/246 (43%), Gaps = 45/246 (18%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++ WG N SGQ G G +P Q+ EL A +A G H+ A
Sbjct: 867 VRADGTVWAWGANGSGQLG-DGTTTSRAVPMQV-KELVDVVA--------VAGGSGHSLA 916
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V +DGT++ WGAN GQLGDGT R P V L V++I+ GA + A+AE
Sbjct: 917 VRADGTVWAWGANGSGQLGDGTTTSRTLPVFVSTLSG--VQAIASGAQHSLALAE----- 969
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVS---------CGSVHVVALSECGL 187
G + +W WG N GS +L G T T QVS G+ +AL+ G
Sbjct: 970 GGV----VWAWGAN-GSG--QLGDGTTTSRTRPVQVSGLSGVQGLVAGASFSLALTP-GK 1021
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ +WG N GQLG G T P P L +S G H+ + +
Sbjct: 1022 VWSWGNNSAGQLGDG-TLNSRSQP----------GAGPTLSSFVALSAGAQHTVVLRSDD 1070
Query: 248 EVYTWG 253
+WG
Sbjct: 1071 SFLSWG 1076
>gi|338723767|ref|XP_001496703.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Equus
caballus]
Length = 1050
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 153/311 (49%), Gaps = 50/311 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G ER+ P+Q+ A A+ + +ACG H A++ G
Sbjct: 55 VYTCGLNTKGQLGH---EREGNKPEQIG-------ALADQHIVHVACGESHNLALSDRGQ 104
Query: 83 LFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
LF+WGA GQLG TE+ P +++L + + +SCG + A+A DG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDAVAVPRVIQKLNQQTILQVSCGNWHSLALAA----DG---- 156
Query: 142 SRLWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
+ + WG+N G FP +P + + QV+ G H ALS G +
Sbjct: 157 -QFFTWGKNSHGQLGLGKEFP----SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAV 211
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG N GQLG E + P + K L +K+ +SCGE H+A ++++G
Sbjct: 212 FGWGMNNAGQLGLSDE-EDRESP----CHVKLL----RTQKVVYISCGEEHTAVLTKSGG 262
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYAW 307
V+T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG H+ A S G +YA+
Sbjct: 263 VFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 308 GGSQAGQLGLG 318
G GQLG G
Sbjct: 320 GCGARGQLGTG 330
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 162/341 (47%), Gaps = 32/341 (9%)
Query: 83 LFTWGANEFGQLGDGTE-EG-RKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG GQ G T +G P+ + VK ++CG + + + E DG +
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLE----DGEVY 56
Query: 141 TSRLWVWGQ---NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T L GQ + N P GA I+ V+CG H +ALS+ G L +WG G
Sbjct: 57 TCGLNTKGQLGHEREGNKPEQI-GALADQHIV-HVACGESHNLALSDRGQLFSWGAGSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG T + + PRVI+ + + I QVSCG +HS A++ +G+ +TWG S
Sbjct: 115 QLGLMTTEDAVAVPRVIQKLNQ--------QTILQVSCGNWHSLALAADGQFFTWGKNSH 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG + + P+RV +L+GI + VA GG HS AL+ GA++ WG + AGQLGL
Sbjct: 167 GQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+ ES + + L+ V ++CG HT V + G + +G S GQ
Sbjct: 225 SDEED------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Query: 378 ANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
++ P V +G EV ++A G H+ + L
Sbjct: 275 GHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 108/252 (42%), Gaps = 35/252 (13%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+ ++ WG GQ G E + +P+ + L ++CG+ H+ A+A+
Sbjct: 102 RGQLFSWGAGSDGQLGLMTTEDAVAVPRVIQ-------KLNQQTILQVSCGNWHSLALAA 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG FTWG N GQLG G E + P++V+ L+ + ++ G + A++
Sbjct: 155 DGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-------- 206
Query: 139 ISTSRLWVWGQNQGSNF--------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
+ ++ WG N + +SCG H L++ G +
Sbjct: 207 -LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFT 265
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEV 249
+G GQLG + + RV++ ++TQ++CG H+ A V +G +
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGS---------EVTQIACGRQHTLAFVPSSGLI 316
Query: 250 YTWGLGSVGQLG 261
Y +G G+ GQLG
Sbjct: 317 YAFGCGARGQLG 328
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPE----LFGCPAGANSRWLDIACGHE 72
+ A + WG N GQ G G+E P Q P+ L G P +A G
Sbjct: 152 LAADGQFFTWGKNSHGQLGL-GKE----FPSQASPQRVRSLEGIPLA------QVAAGGA 200
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
H+ A++ G +F WG N GQLG EE R+ P VK L+++ V ISCG TA + +
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260
Query: 133 --RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQ 189
G S +L N N PR + + Q++CG H +A + GL+
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGY 217
A+G GQLG G TC ++ P +KGY
Sbjct: 318 AFGCGARGQLGTGHTC-NVKCPSPVKGY 344
>gi|158286476|ref|XP_308776.4| AGAP006994-PA [Anopheles gambiae str. PEST]
gi|157020486|gb|EAA04764.5| AGAP006994-PA [Anopheles gambiae str. PEST]
Length = 1055
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 170/369 (46%), Gaps = 53/369 (14%)
Query: 22 AIYVWGYNHSGQTGRKG-RERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
AIY WG G+ G G E Q+ +P+++ + + CG HT + +
Sbjct: 2 AIYCWGNTAHGELGLGGIEEEQVMVPRKMD-------WSQADEVVRVECGTSHTLFLTKE 54
Query: 81 GTLFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
G ++ G N+ GQLG D K P+++ L++ + ISCG + A+
Sbjct: 55 GKMYACGNNDHGQLGHDLDTLPNKRPQRLTSLENYIITCISCGTAHSLALT--------- 105
Query: 140 STSRLWVWGQNQGSNF-----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ +++ WG N PR+ + + Q++ G H +AL+ G L
Sbjct: 106 NWGQVFSWGSNAVGQLGHDAENGRQPTPRMIKAIGAKHVV--QIASGQYHCLALTNNGEL 163
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
AWG N YGQLG G T E + P +I+ A I ++CG HS AVS++G
Sbjct: 164 YAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGV--------PIAFIACGGNHSFAVSKSGA 215
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
++ WG + GQLG L S P ++ L + ++ ++CG S LT++G ++ G
Sbjct: 216 IFGWGKNTFGQLGLNDLNS---RCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCG 272
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIH 367
GQLG G + S ++P + ++ + + +ACG HTL ++ G+I+
Sbjct: 273 AGTFGQLGHG--SCSNEIVPRKV--------FELMGSKITQIACGRRHTLAFVPSRGKIY 322
Query: 368 GWGYNSYGQ 376
G+G GQ
Sbjct: 323 GFGLGGVGQ 331
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 124/251 (49%), Gaps = 30/251 (11%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ +V CG+ H + L++ G + A G N++GQLG + + P+ + ++
Sbjct: 38 VVRVECGTSHTLFLTKEGKMYACGNNDHGQLGHDLDTLPNKRPQRLTSLENYI------- 90
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
IT +SCG HS A++ G+V++WG +VGQLGH + ++ PR + A+ + +
Sbjct: 91 -ITCISCGTAHSLALTNWGQVFSWGSNAVGQLGHDA--ENGRQPTPRMIKAIGAKHVVQI 147
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-----V 343
A G H ALT+ G LYAWG + GQLG+G + +P +P L+ V
Sbjct: 148 ASGQYHCLALTNNGELYAWGSNSYGQLGIGTTSEK---VP---------MPTLIQSLAGV 195
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLA 402
P + +ACG +H+ + G I GWG N++GQ YP+ + VR ++
Sbjct: 196 P--IAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVRYIS 253
Query: 403 AGGGHSAVLAD 413
G S L +
Sbjct: 254 CGDDFSVFLTN 264
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 108/227 (47%), Gaps = 22/227 (9%)
Query: 191 WGYNEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
WG +G+LG G I E + PR + + + +++ +V CG H+ +++ G++
Sbjct: 6 WGNTAHGELGLGGIEEEQVMVPRKM--------DWSQADEVVRVECGTSHTLFLTKEGKM 57
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
Y G GQLGH +K P+R+ +L+ I ++CG HS ALT+ G +++WG
Sbjct: 58 YACGNNDHGQLGHDLDTLPNKR--PQRLTSLENYIITCISCGTAHSLALTNWGQVFSWGS 115
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGW 369
+ GQLG + N R I + + VQ +A G H L +G ++ W
Sbjct: 116 NAVGQLGHDAE--------NGRQPTPRMIKAIGAKHVVQ-IASGQYHCLALTNNGELYAW 166
Query: 370 GYNSYGQ-AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADA 414
G NSYGQ S P+ + G + +A GG HS ++ +
Sbjct: 167 GSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKS 213
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 109/252 (43%), Gaps = 41/252 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G + P+ + A + IA G H A+ ++G
Sbjct: 110 VFSWGSNAVGQLGHDAENGRQPTPRMIK-------AIGAKHVVQIASGQYHCLALTNNGE 162
Query: 83 LFTWGANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
L+ WG+N +GQLG GT E P ++ L + I+CG + + A+++ +
Sbjct: 163 LYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSK---------S 213
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPNTIICQ-----------VSCGSVHVVALSECGLLQA 190
++ WG+N F +L Q +SCG V L+ G +
Sbjct: 214 GAIFGWGKN---TFGQLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFT 270
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEV 249
G +GQLG G +C PR + KITQ++CG H+ A V G++
Sbjct: 271 CGAGTFGQLGHG-SCSNEIVPRKVFELMG--------SKITQIACGRRHTLAFVPSRGKI 321
Query: 250 YTWGLGSVGQLG 261
Y +GLG VGQLG
Sbjct: 322 YGFGLGGVGQLG 333
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 92/200 (46%), Gaps = 20/200 (10%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG N GQ G ++ +P L L G P IACG H+ AV+ G
Sbjct: 163 LYAWGSNSYGQLGIGTTSEKVPMPT-LIQSLAGVPIAF------IACGGNHSFAVSKSGA 215
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F WG N FGQLG R +P +++ L+S V+ ISCG + + N+G + T
Sbjct: 216 IFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLT----NEGGVFTC 271
Query: 143 RLWVWGQ-NQGS----NFPRLFWGAFTPNTIICQVSCGSVHVVALSEC-GLLQAWGYNEY 196
+GQ GS PR + + I Q++CG H +A G + +G
Sbjct: 272 GAGTFGQLGHGSCSNEIVPRKVFELM--GSKITQIACGRRHTLAFVPSRGKIYGFGLGGV 329
Query: 197 GQLGRGITCEGLQGPRVIKG 216
GQLG G+ P++++G
Sbjct: 330 GQLGIGMVGNH-STPQIVRG 348
>gi|440790434|gb|ELR11717.1| regulator of chromosome condensation (RCC1) repeat domain containing
protein [Acanthamoeba castellanii str. Neff]
Length = 1563
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 155/316 (49%), Gaps = 36/316 (11%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEG--RKHPEKVKQLQSEFVKSISCG 122
++++CG H AA+ +G ++TWG N G+LG G + G + HP++V +S+ VK + CG
Sbjct: 878 VNVSCGWNHCAALTENGHVYTWGRNGSGELGHGDKSGVPQLHPKQVIFFKSKCVKEVVCG 937
Query: 123 AHCTAAIAEPRENDGTISTSRLWVWGQNQ----GSNFPRLFWGAFTPNTI----ICQVSC 174
T A R G++ + WG + G L W T+ + Q++
Sbjct: 938 GEHTLA----RTESGSV-----YGWGNGRIGQLGLGDRTLHWLPVPIKTLRKMHVTQLAA 988
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G H + + + G + +G E GQLG G+ + L P ++ + I Q +
Sbjct: 989 GYAHTIVVLKSGEVMVFGGGEVGQLGTGMR-KDLLVPTKLQA----------MPSIVQAA 1037
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVH 294
CG H+A ++E GEVYT G GQLGH D+ L P+ V L+G I+ +ACG H
Sbjct: 1038 CGYCHTALLTEAGEVYTCGSAMSGQLGHADNLQNDR-LAPKMVEGLNGKRIRFIACGSFH 1096
Query: 295 SCALTSKGALYAWGGSQAGQL-GLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG 353
+ A+T +Y WGG Q G Q R +++ + + + + + + LV+CG
Sbjct: 1097 TIAITDLDNVYTWGGVQGTDSDGAMRQERKAAILKRVTPSIVKGL----MGKRISLVSCG 1152
Query: 354 HSHTLVYMRDGRIHGW 369
H+H++ DG ++ W
Sbjct: 1153 HAHSVATTMDGEVYVW 1168
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 155/374 (41%), Gaps = 47/374 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG N SG+ G + +P+ P ++ + ++ CG EHT A G+
Sbjct: 896 VYTWGRNGSGELGHGDKSG---VPQLHPKQVIFFKSKCVK---EVVCGGEHTLARTESGS 949
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG GQLG G P +K L+ V ++ G T + + +
Sbjct: 950 VYGWGNGRIGQLGLGDRTLHWLPVPIKTLRKMHVTQLAAGYAHTIVV---------LKSG 1000
Query: 143 RLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
+ V+G + G L I Q +CG H L+E G + G
Sbjct: 1001 EVMVFGGGEVGQLGTGMRKDLLVPTKLQAMPSIVQAACGYCHTALLTEAGEVYTCGSAMS 1060
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW---- 252
GQLG + LQ R+ A + E ++I ++CG +H+ A+++ VYTW
Sbjct: 1061 GQLGH---ADNLQNDRL----APKMVEGLNGKRIRFIACGSFHTIAITDLDNVYTWGGVQ 1113
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G S G + + K + P V L G I V+CG HS A T G +Y W + +
Sbjct: 1114 GTDSDGAMRQERKAAILKRVTPSIVKGLMGKRISLVSCGHAHSVATTMDGEVYVWSSTGS 1173
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNG--------VQLVACGHSHTLVYMR 362
Q L + S ++ P+LV +P+G V+ A G TLV
Sbjct: 1174 LQPPLLLRGSGLSTASGTTEA-----PLLVSAIPDGQDAKSKPVVKHAAAGEEFTLVVTE 1228
Query: 363 DGRIHGWGYNSYGQ 376
+G ++ WG ++GQ
Sbjct: 1229 NGLLYSWGSGAFGQ 1242
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 101/188 (53%), Gaps = 12/188 (6%)
Query: 227 LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
+ ++ VSCG H AA++ENG VYTWG G+LGH +SG +L P++V+ +K
Sbjct: 874 MRQVVNVSCGWNHCAALTENGHVYTWGRNGSGELGHGD-KSGVPQLHPKQVIFFKSKCVK 932
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
+V CGG H+ A T G++Y WG + GQLGLG +T + +P ++ R +
Sbjct: 933 EVVCGGEHTLARTESGSVYGWGNGRIGQLGLGDRTLHWLPVPIKT---LRKM-------H 982
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGG 406
V +A G++HT+V ++ G + +G GQ P+ + + + + A G
Sbjct: 983 VTQLAAGYAHTIVVLKSGEVMVFGGGEVGQLGTGMRKDLLVPTKLQ-AMPSIVQAACGYC 1041
Query: 407 HSAVLADA 414
H+A+L +A
Sbjct: 1042 HTALLTEA 1049
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 127/290 (43%), Gaps = 45/290 (15%)
Query: 131 EPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
E ++DG S +L N P +G + VSCG H AL+E G +
Sbjct: 851 ESEQDDGVSSGGKL---------NVP---FGGLVSMRQVVNVSCGWNHCAALTENGHVYT 898
Query: 191 WGYNEYGQLGRGIT--CEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG N G+LG G L +VI +K + E V CG H+ A +E+G
Sbjct: 899 WGRNGSGELGHGDKSGVPQLHPKQVIFFKSKCVKE---------VVCGGEHTLARTESGS 949
Query: 249 VYTWGLGSVGQLGHCSLQSGDKEL--LPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
VY WG G +GQLG GD+ L LP + L + + +A G H+ + G +
Sbjct: 950 VYGWGNGRIGQLG-----LGDRTLHWLPVPIKTLRKMHVTQLAAGYAHTIVVLKSGEVMV 1004
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRI 366
+GG + GQLG G R L+P + + +P+ VQ ACG+ HT + G +
Sbjct: 1005 FGGGEVGQLGTG--MRKDLLVPTK---------LQAMPSIVQ-AACGYCHTALLTEAGEV 1052
Query: 367 HGWGYNSYGQA--ANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLAD 413
+ G GQ A+ P V+ G+ +R +A G H+ + D
Sbjct: 1053 YTCGSAMSGQLGHADNLQNDRLAPKMVEGLNGKRIRFIACGSFHTIAITD 1102
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 135/324 (41%), Gaps = 49/324 (15%)
Query: 22 AIYVWGYNHSGQTGRKGRERQ-LRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
++Y WG GQ G R L +P + ++ +A G+ HT V
Sbjct: 949 SVYGWGNGRIGQLGLGDRTLHWLPVPIKTLRKMHVT---------QLAAGYAHTIVVLKS 999
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE--NDGT 138
G + +G E GQLG G + P K++ + S + +CG TA + E E G+
Sbjct: 1000 GEVMVFGGGEVGQLGTGMRKDLLVPTKLQAMPS--IVQAACGYCHTALLTEAGEVYTCGS 1057
Query: 139 ISTSRLWVWGQNQGSNF-PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG----Y 193
+ +L Q P++ G I ++CGS H +A+++ + WG
Sbjct: 1058 AMSGQLGHADNLQNDRLAPKMVEG--LNGKRIRFIACGSFHTIAITDLDNVYTWGGVQGT 1115
Query: 194 NEYGQLGRGITCEGLQ--GPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
+ G + + L+ P ++KG ++I+ VSCG HS A + +GEVY
Sbjct: 1116 DSDGAMRQERKAAILKRVTPSIVKGLMG--------KRISLVSCGHAHSVATTMDGEVYV 1167
Query: 252 WGLGSVGQL--------GHCSLQSGDKELLPRRVVAL-DG------IFIKDVACGGVHSC 296
W S G L S SG E P V A+ DG +K A G +
Sbjct: 1168 WS--STGSLQPPLLLRGSGLSTASGTTEA-PLLVSAIPDGQDAKSKPVVKHAAAGEEFTL 1224
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQ 320
+T G LY+WG GQLGLG Q
Sbjct: 1225 VVTENGLLYSWGSGAFGQLGLGDQ 1248
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 48/124 (38%), Gaps = 24/124 (19%)
Query: 68 ACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTA 127
A G E T V +G L++WG+ FGQLG G + R +V + + +S+
Sbjct: 1217 AAGEEFTLVVTENGLLYSWGSGAFGQLGLGDQGDRAEIVQVAKSEESRRRSVRL------ 1270
Query: 128 AIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
+GQN N R W F +TI+ + + V A +
Sbjct: 1271 ------------------TYGQNVLENTLRSHWEQFNSSTILTKCAHYQNWVAAAVVYEM 1312
Query: 188 LQAW 191
L +W
Sbjct: 1313 LNSW 1316
>gi|55727310|emb|CAH90411.1| hypothetical protein [Pongo abelii]
Length = 975
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/314 (33%), Positives = 153/314 (48%), Gaps = 56/314 (17%)
Query: 23 IYVWGYNHSGQTG--RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
+Y G N GQ G R+G + PE G A A+ + +ACG H+ A++
Sbjct: 55 VYTCGLNTKGQLGHVREGNK----------PEQIG--ALADQHIIHVACGESHSLALSDR 102
Query: 81 GTLFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGT 138
G LF+WGA GQLG TE+ P +++L + + +SCG HC A + DG
Sbjct: 103 GQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAS-----DG- 156
Query: 139 ISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSEC 185
+ + WG+N G FP +P + + QV+ G H ALS
Sbjct: 157 ----QFFTWGKNSHGQLGLGKEFP----SQASPQRVRSLEGIPLAQVAAGGAHSFALSLS 208
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + WG N GQLG + R + K L +K+ +SCGE H+A +++
Sbjct: 209 GAVFGWGMNNAGQLGLSD-----EKDRESPCHVKLL----RTQKVVYISCGEEHTAVLTK 259
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGAL 304
+G V+T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG H+ A S G +
Sbjct: 260 SGGVFTFGAGSYGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLI 316
Query: 305 YAWGGSQAGQLGLG 318
YA+G GQLG G
Sbjct: 317 YAFGCGARGQLGTG 330
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 160/341 (46%), Gaps = 32/341 (9%)
Query: 83 LFTWGANEFGQLGDGTEEG--RKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG GQ G T P+ + VK ++CG + + + E DG +
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLE----DGEVY 56
Query: 141 TSRLWVWGQ---NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T L GQ + N P GA II V+CG H +ALS+ G L +WG G
Sbjct: 57 TCGLNTKGQLGHVREGNKPEQI-GALADQHII-HVACGESHSLALSDRGQLFSWGAGSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG T + + PR+I+ + + I QVSCG +H A++ +G+ +TWG S
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQ--------QTILQVSCGNWHCLALASDGQFFTWGKNSH 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG + + P+RV +L+GI + VA GG HS AL+ GA++ WG + AGQLGL
Sbjct: 167 GQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+ ES + + L+ V ++CG HT V + G + +G SYGQ
Sbjct: 225 SDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQL 274
Query: 378 ANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
++ P V +G EV ++A G H+ + L
Sbjct: 275 GHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 108/252 (42%), Gaps = 35/252 (13%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+ ++ WG GQ G E + +P+ + L ++CG+ H A+AS
Sbjct: 102 RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL-------NQQTILQVSCGNWHCLALAS 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG FTWG N GQLG G E + P++V+ L+ + ++ G + A++
Sbjct: 155 DGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-------- 206
Query: 139 ISTSRLWVWGQNQGSNF--------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
+ ++ WG N + +SCG H L++ G +
Sbjct: 207 -LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFT 265
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEV 249
+G YGQLG + + RV++ ++TQ++CG H+ A V +G +
Sbjct: 266 FGAGSYGQLGHDSMNDEVNPRRVLELMGS---------EVTQIACGRQHTLAFVPSSGLI 316
Query: 250 YTWGLGSVGQLG 261
Y +G G+ GQLG
Sbjct: 317 YAFGCGARGQLG 328
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 96/206 (46%), Gaps = 30/206 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPE----LFGCPAGANSRWLDIACGHEHTAAVA 78
+ WG N GQ G G+E P Q P+ L G P +A G H+ A++
Sbjct: 158 FFTWGKNSHGQLGL-GKE----FPSQASPQRVRSLEGIPLA------QVAAGGAHSFALS 206
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
G +F WG N GQLG E+ R+ P VK L+++ V ISCG TA + + G
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK----SGG 262
Query: 139 ISTSRLWVWGQ------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAW 191
+ T +GQ N N PR + + Q++CG H +A + GL+ A+
Sbjct: 263 VFTFGAGSYGQLGHDSMNDEVN-PRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGY 217
G GQLG G TC ++ P +KGY
Sbjct: 320 GCGARGQLGTGHTC-NVKCPSPVKGY 344
>gi|159037172|ref|YP_001536425.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157916007|gb|ABV97434.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 560
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 132/430 (30%), Positives = 178/430 (41%), Gaps = 60/430 (13%)
Query: 1 MDINEIIGETARPVDNIPAKSAI-----YVWGYNHSGQTGRKGRERQLRIPKQLPPELFG 55
+ + + +G + N P+ SA+ WG N SGQ G G +P +
Sbjct: 31 VTVTQAVGVSPVVAQNGPSPSAVAADTALAWGDNASGQLG-DGSTADSSMPVAV-----S 84
Query: 56 CPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
PAG +A G H AV S GT+ WG N GQLGDGT R P V
Sbjct: 85 LPAGVTVT--TVAAGAAHNLAVTSAGTILAWGDNSSGQLGDGTTSNRHTPVAVGLPTGVT 142
Query: 116 VKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQN------QGSNF--PRLFWGAFTPNT 167
V +++ GA + A+ S + WG N G+ P P
Sbjct: 143 VTAVAAGAAHSLAL---------TSAGTVLAWGANTIGQLGDGTTIDSPAPVDVNLPPGV 193
Query: 168 IICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL 227
V+ G+ H +A++ G + AWG N GQLG G T I + P
Sbjct: 194 TATAVAAGAAHSLAVTSAGTVLAWGDNASGQLGEGTT---------IPSRTPVVVSLPSG 244
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
T V+ G+ HS AV+ G V WG S GQLG + + D+ P V G +
Sbjct: 245 VTATAVAGGDLHSLAVTSAGAVLAWGSNSSGQLGDGT--TADRS-TPVAVSLSGGTTVTA 301
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNG 346
VA G S AL+S GA+ AWG + +GQLG G T R+ P+ V P G
Sbjct: 302 VAAGIAFSLALSSAGAVLAWGSNSSGQLGDG-------------TTADRSTPVTVSSPAG 348
Query: 347 --VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG--EVRKLA 402
V +A G +H L G WG NS+GQ + +T P V VG + +A
Sbjct: 349 TTVTAIAGGDAHGLAVTSVGAAIAWGNNSFGQLGDGTNTDRVTPVAVSLPVGTTTLTAIA 408
Query: 403 AGGGHSAVLA 412
AG HS +A
Sbjct: 409 AGAAHSVAVA 418
>gi|302539558|ref|ZP_07291900.1| predicted protein [Streptomyces sp. C]
gi|302448453|gb|EFL20269.1| predicted protein [Streptomyces sp. C]
Length = 419
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 118/360 (32%), Positives = 161/360 (44%), Gaps = 47/360 (13%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHC 125
+A G H AV S+GT+ WGAN+FGQLGDGT P+ + E + A C
Sbjct: 80 LAAGGGHGMAVLSNGTVKAWGANDFGQLGDGTTSTVSTPDHLTPGTVRELSGVTAVAAGC 139
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAF---TPNTII------------C 170
T ++A +S + WG N G+ TP T+I
Sbjct: 140 THSLAL-------LSNGTVKAWGNNFSGQLGNGTTGSISNSTPVTVIDPGNPSAPLSGVT 192
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
++ G H +AL G ++AWG N+ GQLG G T G+ G V A AP L +
Sbjct: 193 AIAAGCDHSLALLSNGTVRAWGLNDRGQLGNGST-SGMSGTPVTV-IAPGNPAAP-LGGV 249
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
+++ GE HS A+ NG V WG S GQLG+ S +G P VV + G + ++
Sbjct: 250 RELAGGESHSLALLSNGTVRAWGDNSAGQLGNGS--TGGVSGTPVTVVNVTGA--RFISA 305
Query: 291 GGVHSCALTSK----GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-N 345
G HS AL S + AWG + GQLG N S P VV
Sbjct: 306 GYHHSIALLSSLVLPSTVRAWGSNSVGQLG------------NGSTGGASGTPATVVNLT 353
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGG 405
G + +A G +H L Y+ G + WG NS GQ N +T + P V +G + +AAGG
Sbjct: 354 GARGIAAGGNHNLAYLSPGTLRSWGGNSAGQLGNGSTTNSGTPITVRTGIGTITYIAAGG 413
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 105/242 (43%), Gaps = 41/242 (16%)
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+++WG N +GQLG G T + P + G + T ++ G H AV NG
Sbjct: 44 VESWGANGFGQLGDG-TTDSRHTPVTVAGL--------TVADATGLAAGGGHGMAVLSNG 94
Query: 248 EVYTWGLGSVGQLGH--CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V WG GQLG S S L P V L G + VA G HS AL S G +
Sbjct: 95 TVKAWGANDFGQLGDGTTSTVSTPDHLTPGTVRELSG--VTAVAAGCTHSLALLSNGTVK 152
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP--------NGVQLVACGHSHT 357
AWG + +GQLG G T S S + P+ V+ +GV +A G H+
Sbjct: 153 AWGNNFSGQLGNG-TTGSIS----------NSTPVTVIDPGNPSAPLSGVTAIAAGCDHS 201
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWC--------VGEVRKLAAGGGHSA 409
L + +G + WG N GQ N ST +PV +G VR+LA G HS
Sbjct: 202 LALLSNGTVRAWGLNDRGQLGN-GSTSGMSGTPVTVIAPGNPAAPLGGVRELAGGESHSL 260
Query: 410 VL 411
L
Sbjct: 261 AL 262
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 132/315 (41%), Gaps = 78/315 (24%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELF--GCPAGANSRWLDIACGHEHTAAVASD 80
+ WG N SGQ G I P + G P+ S IA G +H+ A+ S+
Sbjct: 151 VKAWGNNFSGQLGNG---TTGSISNSTPVTVIDPGNPSAPLSGVTAIAAGCDHSLALLSN 207
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
GT+ WG N+ GQLG+G+ G + V I+ G + A + RE
Sbjct: 208 GTVRAWGLNDRGQLGNGSTSG---------MSGTPVTVIAPG-NPAAPLGGVRE------ 251
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLG 200
++ G H +AL G ++AWG N GQLG
Sbjct: 252 -------------------------------LAGGESHSLALLSNGTVRAWGDNSAGQLG 280
Query: 201 RGITCEGLQGPRV----IKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN----GEVYTW 252
G T G+ G V + G A+F +S G +HS A+ + V W
Sbjct: 281 NGST-GGVSGTPVTVVNVTG-ARF------------ISAGYHHSIALLSSLVLPSTVRAW 326
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G SVGQLG+ S +G P VV L G + +A GG H+ A S G L +WGG+ A
Sbjct: 327 GSNSVGQLGNGS--TGGASGTPATVVNLTG--ARGIAAGGNHNLAYLSPGTLRSWGGNSA 382
Query: 313 GQLGLGPQTRSFSLI 327
GQLG G T S + I
Sbjct: 383 GQLGNGSTTNSGTPI 397
>gi|383453805|ref|YP_005367794.1| hypothetical protein COCOR_01791, partial [Corallococcus
coralloides DSM 2259]
gi|380728287|gb|AFE04289.1| hypothetical protein COCOR_01791 [Corallococcus coralloides DSM
2259]
Length = 827
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 122/407 (29%), Positives = 178/407 (43%), Gaps = 70/407 (17%)
Query: 1 MDINEIIGETARPVDNIPAKS--AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPA 58
+ + E+I +A ++ + ++ WG N SGQ G E +L P Q+ +
Sbjct: 222 VGLTEVIAVSAAGYSSLALRKDGTVWAWGDNESGQLGDGTMEGRL-TPVQVLDLV----- 275
Query: 59 GANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFV 116
R +A G H+ AV +DGT+ WGAN +GQLGDG + EG P V +L V
Sbjct: 276 ----RVTGLAAGRGHSLAVLADGTVRAWGANIYGQLGDGGFSLEGNPRPVAVSKLTD--V 329
Query: 117 KSISCGAHCTAAIAEPRENDGTISTSRLWVWGQN----------QGSNFPRLFWGAFTPN 166
S++ + A+ +DGT+S+ WG N S P +G
Sbjct: 330 VSVAASTSLSFAV----HSDGTVSS-----WGSNVDGALGVEQRSNSRVPSKVFGL---- 376
Query: 167 TIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPE 226
T + VS G + VAL G +++WG N+ GQLG G P P
Sbjct: 377 TDVATVSVGGYYAVALMGDGTVRSWGNNDSGQLGDGTYIRHTPTP------------VPG 424
Query: 227 LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHC--SLQSGDKELLPRRVVALDGIF 284
L +T VS GE H AV +G WG QLG S+ G +P A
Sbjct: 425 LTGVTAVSAGEDHVVAVLSDGSPRVWGDNQFMQLGRPPESVNRGGPVQVPGLTEA----- 479
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP 344
VA G HS AL + G ++AWG + LGLG + P S T + +P L
Sbjct: 480 -SLVAAGKTHSLALLADGTVWAWGDNSFSALGLGDE-------PGASPTPVQ-VPKLA-- 528
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
GV+ +A G + +L + +G + WGY +GQ +E ++ P P+
Sbjct: 529 -GVRSLAAGENSSLAVLANGTVMAWGYGLFGQLGSESASIFQIPEPI 574
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 123/398 (30%), Positives = 175/398 (43%), Gaps = 67/398 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+ WG N SGQ G R P P L G A ++ G +H AV SDG+
Sbjct: 398 VRSWGNNDSGQLGDGTYIRHTPTPV---PGLTGVTA--------VSAGEDHVVAVLSDGS 446
Query: 83 LFTWGANEFGQLGDGTEE-GRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
WG N+F QLG E R P +V L +E + H A +A DGT+
Sbjct: 447 PRVWGDNQFMQLGRPPESVNRGGPVQVPGL-TEASLVAAGKTHSLALLA-----DGTV-- 498
Query: 142 SRLWVWGQNQGSNFPRLFWG-----AFTPNTI-----ICQVSCGSVHVVALSECGLLQAW 191
W WG N +F L G + TP + + ++ G +A+ G + AW
Sbjct: 499 ---WAWGDN---SFSALGLGDEPGASPTPVQVPKLAGVRSLAAGENSSLAVLANGTVMAW 552
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
GY +GQLG + Q P I G L IT V+ G ++S A+ E+G V++
Sbjct: 553 GYGLFGQLGS-ESASIFQIPEPIFG----------LSGITAVAMGHWYSLALREDGTVWS 601
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG + GQLG + D+ P +V L + +A G H+ AL + G ++AWG +
Sbjct: 602 WGYNASGQLGDGTT---DERPRPGQVAGL--TQVTAIAAGASHALALRADGTVWAWGSNA 656
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWG 370
G LG G QT R+ P+ V GV VA G H+L DG + WG
Sbjct: 657 LGTLGDGTQTS-------------RSTPVQVQGLTGVIAVAAGEYHSLALREDGTVWSWG 703
Query: 371 YNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
N+ GQ + ++ P V G V+++AAG H+
Sbjct: 704 NNNEGQLGDVTASSRQSPGQVPGLAG-VQRIAAGEKHA 740
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 109/360 (30%), Positives = 162/360 (45%), Gaps = 53/360 (14%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++ G+EH A+ +DGT++ WG+N GQLGDGT+ R P +V L V ++S + +
Sbjct: 180 VSAGNEHALALRTDGTVWAWGSNFAGQLGDGTKTSRSTPVQVVGLTE--VIAVSAAGYSS 237
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-----ICQVSCGSVHVV 180
A+ DGT+ W WG N+ G TP + + ++ G H +
Sbjct: 238 LAL----RKDGTV-----WAWGDNESGQLGDGTMEGRLTPVQVLDLVRVTGLAAGRGHSL 288
Query: 181 ALSECGLLQAWGYNEYGQLGR-GITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
A+ G ++AWG N YGQLG G + EG P + +L + V+
Sbjct: 289 AVLADGTVRAWGANIYGQLGDGGFSLEGNPRPVAVS----------KLTDVVSVAASTSL 338
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT 299
S AV +G V +WG G LG ++ +P +V L + V+ GG ++ AL
Sbjct: 339 SFAVHSDGTVSSWGSNVDGALG---VEQRSNSRVPSKVFGL--TDVATVSVGGYYAVALM 393
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP--NGVQLVACGHSHT 357
G + +WG + +GQLG G TY R+ P VP GV V+ G H
Sbjct: 394 GDGTVRSWGNNDSGQLGDG--------------TYIRHTPT-PVPGLTGVTAVSAGEDHV 438
Query: 358 LVYMRDGRIHGWGYNSYGQAAN-EKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLADAC 415
+ + DG WG N + Q +S P V + E +AAG HS A+LAD
Sbjct: 439 VAVLSDGSPRVWGDNQFMQLGRPPESVNRGGPVQVP-GLTEASLVAAGKTHSLALLADGT 497
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 113/379 (29%), Positives = 167/379 (44%), Gaps = 56/379 (14%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A ++ WG N G P Q+P +L G +A G + AV
Sbjct: 494 ADGTVWAWGDNSFSALGLGDEPGASPTPVQVP-KLAGV--------RSLAAGENSSLAVL 544
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
++GT+ WG FGQLG + + PE + L + +++ G + A+ E DGT
Sbjct: 545 ANGTVMAWGYGLFGQLGSESASIFQIPEPIFGLSG--ITAVAMGHWYSLALRE----DGT 598
Query: 139 ISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
+ W WG N G+ R G T + ++ G+ H +AL G + AWG
Sbjct: 599 V-----WSWGYNASGQLGDGTTDERPRPGQVAGLTQVTAIAAGASHALALRADGTVWAWG 653
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
N G LG G T P ++G L + V+ GEYHS A+ E+G V++W
Sbjct: 654 SNALGTLGDG-TQTSRSTPVQVQG----------LTGVIAVAAGEYHSLALREDGTVWSW 702
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G + GQLG + S P +V L G+ + +A G H+ A G L A+G + +
Sbjct: 703 GNNNEGQLGDVTASSRQS---PGQVPGLAGV--QRIAAGEKHALAAVEGGPLVAFGKNTS 757
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYN 372
GQLGLG + N+S I L P G+ A G +HTL DG + WG N
Sbjct: 758 GQLGLGERKE------NQSRG---EIASLRNPRGI---AAGIAHTLAVAADGTVWAWGAN 805
Query: 373 SYGQAANEKSTYAWYPSPV 391
+ GQ N ++ + P P+
Sbjct: 806 ATGQLGNGEAANS--PQPI 822
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 111/357 (31%), Positives = 162/357 (45%), Gaps = 51/357 (14%)
Query: 25 VWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
VWG N Q GR P Q+P G L +A G H+ A+ +DGT++
Sbjct: 449 VWGDNQFMQLGRPPESVNRGGPVQVP--------GLTEASL-VAAGKTHSLALLADGTVW 499
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRL 144
WG N F LG G E G P V+ + V+S++ G + + A+ +GT+
Sbjct: 500 AWGDNSFSALGLGDEPG-ASPTPVQVPKLAGVRSLAAGENSSLAVLA----NGTVMAWGY 554
Query: 145 WVWGQNQGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
++GQ GS +F P I I V+ G + +AL E G + +WGYN GQL
Sbjct: 555 GLFGQ-LGSESASIF---QIPEPIFGLSGITAVAMGHWYSLALREDGTVWSWGYNASGQL 610
Query: 200 GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ 259
G G T E + P + G L ++T ++ G H+ A+ +G V+ WG ++G
Sbjct: 611 GDGTTDERPR-PGQVAG----------LTQVTAIAAGASHALALRADGTVWAWGSNALGT 659
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LG + S P +V L G+ VA G HS AL G +++WG + GQ LG
Sbjct: 660 LGDGTQTS---RSTPVQVQGLTGVIA--VAAGEYHSLALREDGTVWSWGNNNEGQ--LGD 712
Query: 320 QTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
T S P + +P L GVQ +A G H L + G + +G N+ GQ
Sbjct: 713 VTASSRQSPGQ-------VPGLA---GVQRIAAGEKHALAAVEGGPLVAFGKNTSGQ 759
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 110/245 (44%), Gaps = 27/245 (11%)
Query: 167 TIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPE 226
T + VS G+ H +AL G + AWG N GQLG G +V+
Sbjct: 175 TDVRAVSAGNEHALALRTDGTVWAWGSNFAGQLGDGTKTSRSTPVQVVG----------- 223
Query: 227 LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
L ++ VS Y S A+ ++G V+ WG GQLG +++ L P +V LD + +
Sbjct: 224 LTEVIAVSAAGYSSLALRKDGTVWAWGDNESGQLGDGTMEG---RLTPVQV--LDLVRVT 278
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
+A G HS A+ + G + AWG + GQLG G FSL N + +V
Sbjct: 279 GLAAGRGHSLAVLADGTVRAWGANIYGQLGDG----GFSLEGNPRPVAVSKLTDVVS--- 331
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGG 406
VA S + DG + WG N G E+ + + PS V + + +V ++ GG
Sbjct: 332 ---VAASTSLSFAVHSDGTVSSWGSNVDGALGVEQRSNSRVPSKV-FGLTDVATVSVGGY 387
Query: 407 HSAVL 411
++ L
Sbjct: 388 YAVAL 392
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 20/178 (11%)
Query: 217 YAKF---LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL 273
Y +F + P L + VS G H+ A+ +G V+ WG GQLG + S
Sbjct: 161 YLRFDGGVRPVPGLTDVRAVSAGNEHALALRTDGTVWAWGSNFAGQLGDGTKTS---RST 217
Query: 274 PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDT 333
P +VV L + V+ G S AL G ++AWG +++GQLG G T L P +
Sbjct: 218 PVQVVGLTEVIA--VSAAGYSSLALRKDGTVWAWGDNESGQLGDG--TMEGRLTPVQVLD 273
Query: 334 YFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
R V +A G H+L + DG + WG N YGQ + + P PV
Sbjct: 274 LVR----------VTGLAAGRGHSLAVLADGTVRAWGANIYGQLGDGGFSLEGNPRPV 321
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 82/186 (44%), Gaps = 31/186 (16%)
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
V+ G YHS V +G V WGL + G G + ++ V+ G
Sbjct: 138 VAAGRYHSLMVRPDGTVLEWGLSYLRFDGGVRPVPGLTD-------------VRAVSAGN 184
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV--PNGVQLV 350
H+ AL + G ++AWG + AGQLG G +T R+ P+ VV + +
Sbjct: 185 EHALALRTDGTVWAWGSNFAGQLGDGTKTS-------------RSTPVQVVGLTEVIAVS 231
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-A 409
A G+S +L +DG + WG N GQ + P V V V LAAG GHS A
Sbjct: 232 AAGYS-SLALRKDGTVWAWGDNESGQLGDGTMEGRLTPVQVLDLV-RVTGLAAGRGHSLA 289
Query: 410 VLADAC 415
VLAD
Sbjct: 290 VLADGT 295
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 41/90 (45%), Gaps = 16/90 (17%)
Query: 23 IYVWGYNHSGQTG---RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+ +G N SGQ G RK + + I P IA G HT AVA+
Sbjct: 749 LVAFGKNTSGQLGLGERKENQSRGEIASLRNPR-------------GIAAGIAHTLAVAA 795
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEKVK 109
DGT++ WGAN GQLG+G P VK
Sbjct: 796 DGTVWAWGANATGQLGNGEAANSPQPITVK 825
>gi|91203943|emb|CAJ71596.1| similar to regulator of chromosome condensation [Candidatus
Kuenenia stuttgartiensis]
Length = 387
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 121/364 (33%), Positives = 169/364 (46%), Gaps = 60/364 (16%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
IA G HT A+ DG+L++WG NE+GQLGDGT + + P +VK L S V I GA +
Sbjct: 42 IAAGAFHTLALKPDGSLWSWGKNEYGQLGDGTIKNKHSPVQVKHLSSIIV--IDGGAWHS 99
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI---------ICQVSCGSV 177
A+ ++DGT+ W WG N G++ + I I +SCG
Sbjct: 100 IAL----KSDGTV-----WAWGGNWAGQLGD---GSYKSSNIPIKTKELSGIIAISCGGQ 147
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H +AL G + AWG N+ GQLG G + Q P I P L I +S G
Sbjct: 148 HNLALKSDGTVWAWGINDKGQLGIG-DAKNQQIPIRI----------PGLNNIVAISAGG 196
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
YHS A+ +G ++ WG ++ QLG S P V L I V GG S A
Sbjct: 197 YHSLAIKSDGSLWAWGSNNMEQLGD---GSATNRCSPVHVSNLRDII--AVNGGGDFSLA 251
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLVACGHS 355
L S G + AWG + QLG G T RN P+ V V + +++ A G+
Sbjct: 252 LKSDGTIMAWGSNGLSQLGDGTTTN-------------RNTPVNVSDVRDIIEIAAKGN- 297
Query: 356 HTLVYMRDGRIHGWGYNSYGQAANEKSTY--AWYPSPVDWCVGEVRKLAAGGGHSAVLAD 413
H+L +G++ W + S G EK A+ P V+ + +V +A G H+ VL +
Sbjct: 298 HSLALTIEGKV--WEFGSIGATPTEKEVTLPAYRPVLVN-EITDVIAIACGEFHNVVLKN 354
Query: 414 ACSL 417
SL
Sbjct: 355 DGSL 358
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 133/295 (45%), Gaps = 41/295 (13%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
+++ G+ H +AL G L +WG NEYGQLG G T + P +K L I
Sbjct: 41 KIAAGAFHTLALKPDGSLWSWGKNEYGQLGDG-TIKNKHSPVQVK----------HLSSI 89
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
+ G +HS A+ +G V+ WG GQLG S +S + +P + L GI ++C
Sbjct: 90 IVIDGGAWHSIALKSDGTVWAWGGNWAGQLGDGSYKSSN---IPIKTKELSGII--AISC 144
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV-PNGVQL 349
GG H+ AL S G ++AWG + GQLG+G D + IPI + N +
Sbjct: 145 GGQHNLALKSDGTVWAWGINDKGQLGIG-------------DAKNQQIPIRIPGLNNIVA 191
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
++ G H+L DG + WG N+ Q + +T P V + ++ + GG S
Sbjct: 192 ISAGGYHSLAIKSDGSLWAWGSNNMEQLGDGSATNRCSPVHVS-NLRDIIAVNGGGDFSL 250
Query: 410 VLAD--------ACSLKELCEFRLAESVTLSNASEIEDV--ASRTGSEALARLCE 454
L + L +L + T N S++ D+ + G+ +LA E
Sbjct: 251 ALKSDGTIMAWGSNGLSQLGDGTTTNRNTPVNVSDVRDIIEIAAKGNHSLALTIE 305
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 95/314 (30%), Positives = 147/314 (46%), Gaps = 55/314 (17%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + ++ WG N +GQ G G + IP + EL G A I+CG +H A
Sbjct: 102 LKSDGTVWAWGGNWAGQLG-DGSYKSSNIPIK-TKELSGIIA--------ISCGGQHNLA 151
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ SDGT++ WG N+ GQLG G + ++ P ++ L + + +IS G + + AI ++D
Sbjct: 152 LKSDGTVWAWGINDKGQLGIGDAKNQQIPIRIPGLNN--IVAISAGGYHSLAI----KSD 205
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-----ICQVSCGSVHVVALSECGL 187
G+ LW WG N N +L G+ T P + I V+ G +AL G
Sbjct: 206 GS-----LWAWGSN---NMEQLGDGSATNRCSPVHVSNLRDIIAVNGGGDFSLALKSDGT 257
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWG N QLG G T V ++ I +++ HS A++ G
Sbjct: 258 IMAWGSNGLSQLGDGTTTNRNTPVNV-----------SDVRDIIEIAAKGNHSLALTIEG 306
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKEL-LP--RRVVALDGIFIKDVACGGVHSCALTSKGAL 304
+V W GS+G +KE+ LP R V+ + + +ACG H+ L + G+L
Sbjct: 307 KV--WEFGSIGA------TPTEKEVTLPAYRPVLVNEITDVIAIACGEFHNVVLKNDGSL 358
Query: 305 YAWGGSQAGQLGLG 318
+ WG + GQLG G
Sbjct: 359 WVWGINNFGQLGDG 372
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 8/104 (7%)
Query: 2 DINEIIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGAN 61
D+ +II A+ ++ VW + G G E+++ +P P
Sbjct: 285 DVRDIIEIAAKGNHSLALTIEGKVWEF---GSIGATPTEKEVTLPAYRP-----VLVNEI 336
Query: 62 SRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHP 105
+ + IACG H + +DG+L+ WG N FGQLGDGT + P
Sbjct: 337 TDVIAIACGEFHNVVLKNDGSLWVWGINNFGQLGDGTVGSKTKP 380
>gi|442319025|ref|YP_007359046.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441486667|gb|AGC43362.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 746
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 125/385 (32%), Positives = 167/385 (43%), Gaps = 66/385 (17%)
Query: 12 RPV----DNIPAKSAIYVWG--YNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
RPV + + K+ VWG N SGQ G G Q +P Q L G +
Sbjct: 402 RPVGGLYETLVLKADGTVWGAGRNGSGQLG-DGSGTQRVVPAQ-AVGLTGA--------V 451
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
+A G H A SDGT++ WG N GQLGDG+ P +V L V +++ G
Sbjct: 452 SVASGANHALAAKSDGTVWAWGGNGSGQLGDGSTTASLIPIQVPGLTG--VAAVAAGDGF 509
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG-----AFTPN-TIICQVSC--GSV 177
+ A+ ++DGT LW WG+N + A PN T + V+ G+
Sbjct: 510 SLAL----KSDGT-----LWAWGRNSSGSLGDGTTTGRTTPALVPNFTGVKAVATAPGAD 560
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HV+AL G L AWG N YGQLG G L P + L + ++ G
Sbjct: 561 HVLALKTNGTLWAWGGNSYGQLGDGSVLRKLS-PVFV-----------NLTGVLSIATGS 608
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
HS V G V+TWG QLG + G LP +V + G +A G HS
Sbjct: 609 DHSLVVRTGGAVWTWGRNDAAQLGDGT---GTTRTLPVQVQGVTGA--TALAAGDRHSLM 663
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQLVACGHSH 356
L S G L+AWG + G+LG G T R +P+ V P GV ++ G H
Sbjct: 664 LRSDGTLWAWGSNSEGELGDGTMTG-------------RPLPVRVRAPAGVVALSAGARH 710
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEK 381
+L DG + WG N +GQ N K
Sbjct: 711 SLAMTPDGTVWAWGLNLFGQHGNNK 735
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 131/459 (28%), Positives = 193/459 (42%), Gaps = 119/459 (25%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + ++ WG N GQ G ++L + L L ++ G++ +AA
Sbjct: 162 LKSDGTVWAWGRNADGQLGDGSTTQRLSPVRALGLSLV----------TSVSAGYDFSAA 211
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ +DGT++TWG N G+LG+GT R P +V L + V ++ +H A ++D
Sbjct: 212 LKADGTVWTWGDNTDGELGNGTLTDRLTPAQVPGL-TGVVFLMAGHSHVMAV-----KSD 265
Query: 137 GTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALS 183
GT+ WVWG+N +G+ +L TP + + V G + VAL
Sbjct: 266 GTV-----WVWGRNDWGVLGLGEGAPIRQL-----TPTQVPGISQVAFVDSGEHYTVALK 315
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFL-DEAPELEKITQVSCGEYHSAA 242
G L WGYN YGQLG G G K+L + P L ++ + G YH+ A
Sbjct: 316 TDGTLWGWGYNNYGQLGEG------------TGGVKYLPTQLPGLTQVATLGVGRYHAMA 363
Query: 243 VSENGEVYTWGL-----------------------------------------GSV---- 257
+ ++G + WGL G+V
Sbjct: 364 IKQDGTAWAWGLHDAYQYANVTRPDSAVAVATQFTGALRPVGGLYETLVLKADGTVWGAG 423
Query: 258 ----GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
GQLG SG + ++P + V L G VA G H+ A S G ++AWGG+ +G
Sbjct: 424 RNGSGQLGDG---SGTQRVVPAQAVGLTGAV--SVASGANHALAAKSDGTVWAWGGNGSG 478
Query: 314 QLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNS 373
QLG G T SLIP + +P L GV VA G +L DG + WG NS
Sbjct: 479 QLGDGSTTA--SLIPIQ-------VPGL---TGVAAVAAGDGFSLALKSDGTLWAWGRNS 526
Query: 374 YGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
G + +T P+ V G V+ +A G VLA
Sbjct: 527 SGSLGDGTTTGRTTPALVPNFTG-VKAVATAPGADHVLA 564
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 104/322 (32%), Positives = 145/322 (45%), Gaps = 52/322 (16%)
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
D HT + DGT+++WG N G+LGDGT R P +V L S G +
Sbjct: 50 DTLSLQSHTLWLKPDGTVWSWGTNYGGELGDGTHNHRSTPAQVPNLTSVTAVEAGRGNYS 109
Query: 126 TAAIAEPRENDGTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTI-----ICQVSC 174
A R DG+ LWVWG N G+ R ++P + + VS
Sbjct: 110 MA-----RRADGS-----LWVWGYNTYGQLGDGTTTSR-----WSPIPVPGFSGVSSVSG 154
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G +H +AL G + AWG N GQLG G T + L R + L +T VS
Sbjct: 155 GYMHSMALKSDGTVWAWGRNADGQLGDGSTTQRLSPVRALG-----------LSLVTSVS 203
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVH 294
G SAA+ +G V+TWG + G+LG+ +L L P +V L G+ + G H
Sbjct: 204 AGYDFSAALKADGTVWTWGDNTDGELGNGTLT---DRLTPAQVPGLTGVVF--LMAGHSH 258
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGH 354
A+ S G ++ WG + G LGLG L P + +P + + V V G
Sbjct: 259 VMAVKSDGTVWVWGRNDWGVLGLGEGAPIRQLTPTQ-------VPGI---SQVAFVDSGE 308
Query: 355 SHTLVYMRDGRIHGWGYNSYGQ 376
+T+ DG + GWGYN+YGQ
Sbjct: 309 HYTVALKTDGTLWGWGYNNYGQ 330
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 121/460 (26%), Positives = 173/460 (37%), Gaps = 104/460 (22%)
Query: 14 VDNIPAKSAIYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHE 72
V + + ++VWG N G G +G + P Q+P S+ + G
Sbjct: 259 VMAVKSDGTVWVWGRNDWGVLGLGEGAPIRQLTPTQVP---------GISQVAFVDSGEH 309
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
+T A+ +DGTL+ WG N +GQLG+GT + P ++ L V ++ G + AI
Sbjct: 310 YTVALKTDGTLWGWGYNNYGQLGEGTGGVKYLPTQLPGLTQ--VATLGVGRYHAMAI--- 364
Query: 133 RENDGTISTSRLWVWGQNQGSNFPRL------------FWGAFTP-----NTIICQ---- 171
+ DGT W WG + + + F GA P T++ +
Sbjct: 365 -KQDGTA-----WAWGLHDAYQYANVTRPDSAVAVATQFTGALRPVGGLYETLVLKADGT 418
Query: 172 ----------------------------------VSCGSVHVVALSECGLLQAWGYNEYG 197
V+ G+ H +A G + AWG N G
Sbjct: 419 VWGAGRNGSGQLGDGSGTQRVVPAQAVGLTGAVSVASGANHALAAKSDGTVWAWGGNGSG 478
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG G T L + P L + V+ G+ S A+ +G ++ WG S
Sbjct: 479 QLGDGSTTASL-----------IPIQVPGLTGVAAVAAGDGFSLALKSDGTLWAWGRNSS 527
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
G LG + P V G+ A G H AL + G L+AWGG+ GQLG
Sbjct: 528 GSLGDGTTT---GRTTPALVPNFTGVKAVATAPGADHVLALKTNGTLWAWGGNSYGQLGD 584
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
G R S P+ V GV +A G H+LV G + WG N Q
Sbjct: 585 GSVLRKLS-------------PVFVNLTGVLSIATGSDHSLVVRTGGAVWTWGRNDAAQL 631
Query: 378 ANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSL 417
+ T P V G LAAG HS +L +L
Sbjct: 632 GDGTGTTRTLPVQVQGVTGAT-ALAAGDRHSLMLRSDGTL 670
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 102/236 (43%), Gaps = 32/236 (13%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H + L G + +WG N G+LG G + + P L +T V G
Sbjct: 57 HTLWLKPDGTVWSWGTNYGGELGDGT-----------HNHRSTPAQVPNLTSVTAVEAGR 105
Query: 238 -YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSC 296
+S A +G ++ WG + GQLG + S P V G+ V+ G +HS
Sbjct: 106 GNYSMARRADGSLWVWGYNTYGQLGDGTTTS---RWSPIPVPGFSGV--SSVSGGYMHSM 160
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
AL S G ++AWG + GQLG G T+ S + R + + +V + V+ G+
Sbjct: 161 ALKSDGTVWAWGRNADGQLGDGSTTQRLSPV--------RALGLSLVTS----VSAGYDF 208
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
+ DG + WG N+ G+ N T P+ V G V +A GHS V+A
Sbjct: 209 SAALKADGTVWTWGDNTDGELGNGTLTDRLTPAQVPGLTGVVFLMA---GHSHVMA 261
>gi|449270679|gb|EMC81336.1| putative E3 ubiquitin-protein ligase HERC3 [Columba livia]
Length = 1050
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/311 (34%), Positives = 151/311 (48%), Gaps = 50/311 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G + PE G AG + + +ACG H+ A++ G
Sbjct: 55 VYTCGLNTKGQLGHDCEGSK--------PEQIGALAGQHI--VHVACGESHSLALSDQGQ 104
Query: 83 LFTWGANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
LF+WGA GQLG T E+ P +K+L + + +SCG HC A A DG
Sbjct: 105 LFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAA-----DG--- 156
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFTPNTI------------ICQVSCGSVHVVALSECGLL 188
+ + WGQN ++ +L G P+ + QV+ G H ALS G +
Sbjct: 157 --QFFTWGQN---SYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAV 211
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG N GQLG + R + K L +K+ +SCGE H+A ++++G
Sbjct: 212 FGWGKNSSGQLGLSD-----ERDRESPCHVKLLRS----QKVVYISCGEEHTAVLTKSGG 262
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYAW 307
V+T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG H+ A S G +YA+
Sbjct: 263 VFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAF 319
Query: 308 GGSQAGQLGLG 318
G GQLG G
Sbjct: 320 GCGTRGQLGTG 330
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 107/336 (31%), Positives = 162/336 (48%), Gaps = 40/336 (11%)
Query: 83 LFTWGANEFGQ--LGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG + FGQ +G + P+ + VK ++CG + + + E DG +
Sbjct: 1 MLCWGYSSFGQPGIGSNIQVIVPEPQVYGFIHDRNVKEVACGGNHSVFLLE----DGEVY 56
Query: 141 TSRLWVWGQN----QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
T L GQ +GS ++ GA I+ V+CG H +ALS+ G L +WG
Sbjct: 57 TCGLNTKGQLGHDCEGSKPEQI--GALAGQHIV-HVACGESHSLALSDQGQLFSWGAGSD 113
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG + + PR+IK + + I QVSCG +H A++ +G+ +TWG S
Sbjct: 114 GQLGLTTIEDAVTVPRLIKKLNQ--------QTILQVSCGNWHCLALAADGQFFTWGQNS 165
Query: 257 VGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
GQLG C Q+ P+RV +LDGI + VA GG HS AL+ GA++ WG + +G
Sbjct: 166 YGQLGLGKECPSQAS-----PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSG 220
Query: 314 QLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNS 373
QLGL + ES + + L+ V ++CG HT V + G + +G S
Sbjct: 221 QLGLSDERD------RESPCHVK----LLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 374 YGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
GQ ++ P V +G EV ++A G H+
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHT 306
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 116/376 (30%), Positives = 175/376 (46%), Gaps = 48/376 (12%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFT 85
WGY+ GQ G G Q+ +P+ P+++G N + ++ACG H+ + DG ++T
Sbjct: 4 WGYSSFGQPGI-GSNIQVIVPE---PQVYGFIHDRNVK--EVACGGNHSVFLLEDGEVYT 57
Query: 86 WGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE--NDGTISTSR 143
G N GQLG E + PE++ L + + ++CG + A+++ + + G S +
Sbjct: 58 CGLNTKGQLGHDCEGSK--PEQIGALAGQHIVHVACGESHSLALSDQGQLFSWGAGSDGQ 115
Query: 144 LWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGI 203
L + PRL TI+ QVSCG+ H +AL+ G WG N YGQLG G
Sbjct: 116 LGLTTIEDAVTVPRLI-KKLNQQTIL-QVSCGNWHCLALAADGQFFTWGQNSYGQLGLGK 173
Query: 204 TCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHC 263
C P+ +K LD P + QV+ G HS A+S +G V+ WG S GQLG
Sbjct: 174 ECPSQASPQRVKS----LDGIP----LAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLS 225
Query: 264 SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG------- 316
D+E P V L + ++CG H+ LT G ++ +G GQLG
Sbjct: 226 D--ERDRE-SPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282
Query: 317 LGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYG 375
+ P+ R L+ +E V +ACG HTL ++ G I+ +G + G
Sbjct: 283 VNPR-RVLELMGSE----------------VSQIACGRHHTLAFVPSSGMIYAFGCGTRG 325
Query: 376 QAANEKSTYAWYPSPV 391
Q + PSPV
Sbjct: 326 QLGTGHTCNVKCPSPV 341
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A + WG N GQ G G+E + Q L G P +A G H+ A
Sbjct: 152 LAADGQFFTWGQNSYGQLGL-GKECPSQASPQRVKSLDGIPLA------QVAAGGAHSFA 204
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP--RE 134
++ G +F WG N GQLG E R+ P VK L+S+ V ISCG TA + +
Sbjct: 205 LSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVF 264
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGY 193
G S +L N N PR + + Q++CG H +A G++ A+G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVN-PRRVLELM--GSEVSQIACGRHHTLAFVPSSGMIYAFGC 321
Query: 194 NEYGQLGRGITCEGLQGPRVIKGY 217
GQLG G TC ++ P +KG+
Sbjct: 322 GTRGQLGTGHTC-NVKCPSPVKGH 344
>gi|302799595|ref|XP_002981556.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
gi|300150722|gb|EFJ17371.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
Length = 430
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 157/325 (48%), Gaps = 51/325 (15%)
Query: 67 IACGHEHTAAV-ASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AH 124
+ACG +HT A A+ T+++WG +FG+LG G P +K LQ ++ I+CG +H
Sbjct: 62 VACGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIACGDSH 121
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTIIC-------QVS 173
C A A+ ++ WG+NQ +L G + P+ ++ ++
Sbjct: 122 CLAVTAD----------GEVYSWGRNQNG---QLGLGDTDDSLVPHKLLAFEGVSVKMLA 168
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL--EKIT 231
G+ H A+++ G L WG+ YG LG G +G R++ E P + EK+
Sbjct: 169 AGAEHTAAVTDSGKLYGWGWGRYGNLGLGD-----RGDRMLPA------EVPAVGDEKMC 217
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
V+CG H+ AVS++G++YT+G GQLGH LLP +V AL I V+ G
Sbjct: 218 MVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYAD---HLLPHQVAALAEFNITQVSGG 274
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVA 351
H+ ALT G LY WG ++ GQ+G G + + + +IP V V+
Sbjct: 275 WRHTVALTEAGKLYGWGWNKFGQVGSGD-------VDDHTSPQLISIP--GQHQRVVQVS 325
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQ 376
CG HT+ ++ WG + GQ
Sbjct: 326 CGWRHTVAVTDKNNVYSWGRGTSGQ 350
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/317 (32%), Positives = 155/317 (48%), Gaps = 42/317 (13%)
Query: 15 DNIPAKSA----IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACG 70
D+ A SA IY WG+ G+ G G L +P + G R IACG
Sbjct: 67 DHTTAYSATRLTIYSWGWGDFGRLGH-GNSSDLFVPHPIK-----ALQGLEIR--QIACG 118
Query: 71 HEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIA 130
H AV +DG +++WG N+ GQLG G + P K+ + VK ++ GA TAA+
Sbjct: 119 DSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVT 178
Query: 131 EPRENDGTISTSRLWVWGQ----NQGSNFPRLFWGAFTP---NTIICQVSCGSVHVVALS 183
+ + G W WG+ G R+ A P + +C V+CG H +A+S
Sbjct: 179 DSGKLYG-------WGWGRYGNLGLGDRGDRML-PAEVPAVGDEKMCMVACGWRHTIAVS 230
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ G L +G+++YGQLG G + L P + A+F ITQVS G H+ A+
Sbjct: 231 QSGKLYTYGWSKYGQLGHGDYADHLL-PHQVAALAEF--------NITQVSGGWRHTVAL 281
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF--IKDVACGGVHSCALTSK 301
+E G++Y WG GQ+G + D P +++++ G + V+CG H+ A+T K
Sbjct: 282 TEAGKLYGWGWNKFGQVGSGDV---DDHTSP-QLISIPGQHQRVVQVSCGWRHTVAVTDK 337
Query: 302 GALYAWGGSQAGQLGLG 318
+Y+WG +GQLG G
Sbjct: 338 NNVYSWGRGTSGQLGHG 354
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/326 (31%), Positives = 157/326 (48%), Gaps = 44/326 (13%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
L ++ G HT A+ S + ++G E GQLG G E R P + L + ++CGA
Sbjct: 8 LLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRLLPRIIGALNDCEISLVACGAD 67
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVS 173
T A + R T W WG +F RL G F P+ I I Q++
Sbjct: 68 HTTAYSATR------LTIYSWGWG-----DFGRLGHGNSSDLFVPHPIKALQGLEIRQIA 116
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
CG H +A++ G + +WG N+ GQLG G T + L +++ A E + +
Sbjct: 117 CGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLL---------AFEGVSVKML 167
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
+ G H+AAV+++G++Y WG G G LG L +LP V A+ + VACG
Sbjct: 168 AAGAEHTAAVTDSGKLYGWGWGRYGNLG---LGDRGDRMLPAEVPAVGDEKMCMVACGWR 224
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG 353
H+ A++ G LY +G S+ GQLG G L+P++ + L N Q V+ G
Sbjct: 225 HTIAVSQSGKLYTYGWSKYGQLGHGDYAD--HLLPHQ-------VAALAEFNITQ-VSGG 274
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQAAN 379
HT+ G+++GWG+N +GQ +
Sbjct: 275 WRHTVALTEAGKLYGWGWNKFGQVGS 300
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 95/195 (48%), Gaps = 21/195 (10%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFI 285
K+ VS G H+ A+ V ++G G GQLGH GD E LLPR + AL+ I
Sbjct: 5 RKVLLVSAGASHTVALLSGQVVCSFGRGEDGQLGH-----GDAEDRLLPRIIGALNDCEI 59
Query: 286 KDVACGGVHSCALT-SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP 344
VACG H+ A + ++ +Y+WG G+LG G N SD + + PI +
Sbjct: 60 SLVACGADHTTAYSATRLTIYSWGWGDFGRLGHG----------NSSDLFVPH-PIKALQ 108
Query: 345 N-GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLA 402
++ +ACG SH L DG ++ WG N GQ + + P + G V+ LA
Sbjct: 109 GLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLA 168
Query: 403 AGGGHSAVLADACSL 417
AG H+A + D+ L
Sbjct: 169 AGAEHTAAVTDSGKL 183
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG+N GQ G + P+L P G + R + ++CG HT AV
Sbjct: 287 LYGWGWNKFGQVGSG------DVDDHTSPQLISIP-GQHQRVVQVSCGWRHTVAVTDKNN 339
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSE 114
+++WG GQLG G R P+ ++ L ++
Sbjct: 340 VYSWGRGTSGQLGHGDAVDRSAPKGIQALSAD 371
>gi|159037173|ref|YP_001536426.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157916008|gb|ABV97435.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 569
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 118/390 (30%), Positives = 159/390 (40%), Gaps = 56/390 (14%)
Query: 12 RPVDNIPAKSAIYVWGYNHSGQTG--RKGRERQLRIPKQLPPELFGCPAGANSRWLDIAC 69
RP A A+ WG N+ GQ G R + IP LP + A
Sbjct: 53 RPSPTTVASDAVLAWGDNYYGQLGDGTTNNYRTVPIPVGLP---------KGTEVTAAAG 103
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAI 129
G H+ AV S GT+ WG N GQLGDGT R P V+ V +++ G + + A+
Sbjct: 104 GDAHSLAVTSAGTVLAWGRNAVGQLGDGTTINRSTPVDVRLPPGTTVTAVAAGFNHSLAL 163
Query: 130 AEPRENDGTISTSRLWVWGQNQG--------SNFPRLFWGAFTPNTIICQVSCGSVHVVA 181
S ++ WG N +N +F T+I V+ G +H +A
Sbjct: 164 ---------TSAGTVFAWGDNSTGQLGDGTRTNRSTPVAVSFPSGTVITAVAAGGMHSLA 214
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
L+ G + AWG N GQLG G + V+ G P +T ++ G HS
Sbjct: 215 LTSAGTVFAWGDNSTGQLGDGTRTN--RSTPVVVGL-------PVGTIVTAIAGGGSHSL 265
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
AV+ G WG VGQLG S + D + V G + VA G HS ALTS
Sbjct: 266 AVTSAGNARAWGNNFVGQLGDGSNINRDASV---HVRLPPGTTVTAVAGGLTHSLALTSV 322
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQL--VACGHSHTL 358
G + +WG + GQLG + RN P V +P GV + VA G L
Sbjct: 323 GTVLSWGSNNWGQLG-------------DGTARDRNTPGSVSLPPGVTITAVAAGDLFGL 369
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYP 388
G + WG N GQ + +T P
Sbjct: 370 ALTSAGTVLAWGGNIVGQLGDGTTTVRRTP 399
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 14/129 (10%)
Query: 23 IYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+ WG N+ GQ G R+R LPP + +A G A+ S G
Sbjct: 325 VLSWGSNNWGQLGDGTARDRNTPGSVSLPPGV---------TITAVAAGDLFGLALTSAG 375
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
T+ WG N GQLGDGT R+ P + + +I+ G+ + A+ PR ST
Sbjct: 376 TVLAWGGNIVGQLGDGTTTVRRTPVAASLPTATTITAIATGSGHSLALVAPRP----AST 431
Query: 142 SRLWVWGQN 150
+ L V +N
Sbjct: 432 TTLRVSPRN 440
>gi|313221348|emb|CBY32102.1| unnamed protein product [Oikopleura dioica]
Length = 1199
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 117/403 (29%), Positives = 168/403 (41%), Gaps = 64/403 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG N GQ G + P P AN + IA G HT + S
Sbjct: 1 MYGWGKNDYGQLGLGSENMLISCPS---------PIDANQSVISIASGLRHTVYLTSTRK 51
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+++ G+NEFGQLG + R P V +E + ++ G + AIAE +
Sbjct: 52 VYSCGSNEFGQLGQQKSQCR--PSLVTGFGAEEIFHVAAGDFFSIAIAE---------SG 100
Query: 143 RLWVWGQNQGSNF---------PRLF-----WGAFTPNTIICQVSCGSVHVVALSECGLL 188
L+ WG++ P+L W + QV+CG+ H +AL+E G +
Sbjct: 101 LLFGWGRSLNGELMCKQDSLHEPKLLDKIMHWS-------VVQVACGAQHCIALTEEGTI 153
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG N GQLG G + P +I F I+Q+ G YHS +S +G
Sbjct: 154 LSWGSNTQGQLGLGSSEIEFLEPTIIASLNAF--------PISQICAGAYHSGVLSPSGT 205
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
++TWG + GQLGH + S PR V L + VA G HS T G +++WG
Sbjct: 206 LFTWGKNNWGQLGHGNSDSFQSS--PRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWG 263
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHG 368
GQLG T + I L+ Q + CG HT+ ++ G
Sbjct: 264 HGGNGQLGHNSMANV---------TQPKKIMELMGTTVCQ-ICCGRRHTISLTDKRKLLG 313
Query: 369 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL---AAGGGHS 408
+G NS Q T A P + + + R+L AAGG S
Sbjct: 314 FGLNSNNQLGTHNDTSARLPITIPISLTDDRQLSCIAAGGDQS 356
>gi|444916978|ref|ZP_21237086.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444711624|gb|ELW52563.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 734
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 117/369 (31%), Positives = 170/369 (46%), Gaps = 61/369 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTA 75
+ + A++ WG N+SGQ G G + + P L + ++ G +HT
Sbjct: 400 LDSNGAVWAWGDNYSGQLGNGTGLDSLVAAPVGLGGSVA------------VSAGFKHTL 447
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
+ +D T++ WG NE GQLGDGT R P +V L V ++S G++ + A+ +
Sbjct: 448 VLKADTTVWAWGVNEHGQLGDGTLTDRTRPVQVAGLSG--VSAVSAGSYHSLAL----RS 501
Query: 136 DGTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQ 189
+GT+ W WG N+ G+N RL + + V+ G H +AL G +
Sbjct: 502 NGTV-----WAWGFNRYGQLGDGTNTDRLQPVQVAGLSGVVAVAAGDSHSLALRSDGTVW 556
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLD-EAPELEKITQVSCGEYHSAAVSENGE 248
AWGYN GQ+G G +FL + L + VS G YHS A+ +G
Sbjct: 557 AWGYNFDGQIGDGSYSW------------RFLPVQVVGLSGVVSVSAGGYHSLALRSDGT 604
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
V+TWG GQLG S + + P +V L G+ + G HS L S G ++AWG
Sbjct: 605 VWTWGYNGSGQLGDGS--TAINKPAPVQVAGLSGVV--SLGSGNYHSLGLRSDGTVWAWG 660
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIH 367
+ GQLG G SL+ R+ P+ V +GV V G H+L DG +
Sbjct: 661 FNFDGQLGDG------SLLN-------RSTPVRVSGLSGVVSVVAGDYHSLARRSDGTVW 707
Query: 368 GWGYNSYGQ 376
WGYN GQ
Sbjct: 708 AWGYNGEGQ 716
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 124/425 (29%), Positives = 176/425 (41%), Gaps = 97/425 (22%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + ++ WG N GQ G G Q +P Q+ L G ++++ G HT A
Sbjct: 201 LRSDGTVWAWGDNRYGQLG-DGTTTQRAVPVQVL-NLSGV--------MNLSAGSFHTVA 250
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP---- 132
+ SDG+++ WG N +GQLGDGT R P +V S+ + ++ H A ++
Sbjct: 251 LRSDGSVWAWGFNAYGQLGDGTTTSRFQPVQVGL--SDVLTLVAGNYHSLAVRSDGAVWA 308
Query: 133 -------RENDGTISTSRL----------------------------WVWGQNQGSNFPR 157
+ DGT ++SR+ W WG N F +
Sbjct: 309 WGDNRYRQLGDGTTTSSRVPVQSGLSGGVTLVAGYKHSLVLRSDGTVWSWGDNV---FGQ 365
Query: 158 LFWGAFTPNTIICQVS----------CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEG 207
L G F P + +VS G +H V L G + AWG N GQLG G +
Sbjct: 366 LGDGTFNPRSSAVKVSWLSLGRADVSSGQLHSVVLDSNGAVWAWGDNYSGQLGNGTGLDS 425
Query: 208 LQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQS 267
L V L VS G H+ + + V+ WG+ GQLG +L
Sbjct: 426 LVAAPV------------GLGGSVAVSAGFKHTLVLKADTTVWAWGVNEHGQLGDGTLT- 472
Query: 268 GDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLI 327
P +V L G+ V+ G HS AL S G ++AWG ++ GQLG G T
Sbjct: 473 --DRTRPVQVAGLSGV--SAVSAGSYHSLALRSNGTVWAWGFNRYGQLGDGTNTD----- 523
Query: 328 PNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAW 386
R P+ V +GV VA G SH+L DG + WGYN GQ + +Y+W
Sbjct: 524 --------RLQPVQVAGLSGVVAVAAGDSHSLALRSDGTVWAWGYNFDGQIGD--GSYSW 573
Query: 387 YPSPV 391
PV
Sbjct: 574 RFLPV 578
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 168/368 (45%), Gaps = 61/368 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + ++ WG+N GQ G G P ++ L G + +A G H+
Sbjct: 51 VHSDGTVWAWGFNRQGQLG-DGTLVDSPTPVRV-TNLSGV--------VSVASGDYHSLG 100
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
++SDGT++ WG N GQLG+GT P +V+ L +S G+ + +A +D
Sbjct: 101 LSSDGTVWAWGDNTAGQLGNGTASASPVPVRVQNLSGV----VSLGSGFSHGLA--LRSD 154
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPN--------TIICQVSCGSVHVVALSECGLL 188
GT+ W WG N+ + + GA N + + V G + +AL G +
Sbjct: 155 GTV-----WAWGDNRYNQLGNV--GATRSNLPVQVPGLSGVIAVVAGGYYSLALRSDGTV 207
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
AWG N YGQLG G T + +V+ L + +S G +H+ A+ +G
Sbjct: 208 WAWGDNRYGQLGDGTTTQRAVPVQVL-----------NLSGVMNLSAGSFHTVALRSDGS 256
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
V+ WG + GQLG + S P +V D + + G HS A+ S GA++AWG
Sbjct: 257 VWAWGFNAYGQLGDGTTTS---RFQPVQVGLSD---VLTLVAGNYHSLAVRSDGAVWAWG 310
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHG 368
++ QLG G T S +P +S + GV LVA G+ H+LV DG +
Sbjct: 311 DNRYRQLGDGTTTS--SRVPVQSG----------LSGGVTLVA-GYKHSLVLRSDGTVWS 357
Query: 369 WGYNSYGQ 376
WG N +GQ
Sbjct: 358 WGDNVFGQ 365
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 159/363 (43%), Gaps = 50/363 (13%)
Query: 56 CPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
P G S +A G H+ V SDGT++ WG N GQLGDGT P +V L
Sbjct: 30 SPLGGRSSAARLALGQYHSVGVHSDGTVWAWGFNRQGQLGDGTLVDSPTPVRVTNLSG-- 87
Query: 116 VKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQ---- 171
V S++ G + + ++ DGT+ W WG N + +P + Q
Sbjct: 88 VVSVASGDYHSLGLSS----DGTV-----WAWGDNTAGQLGNGT-ASASPVPVRVQNLSG 137
Query: 172 -VSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
VS GS H +AL G + AWG N Y QLG V + + P L
Sbjct: 138 VVSLGSGFSHGLALRSDGTVWAWGDNRYNQLG-----------NVGATRSNLPVQVPGLS 186
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
+ V G Y+S A+ +G V+ WG GQLG + + +P +V+ L G+ ++
Sbjct: 187 GVIAVVAGGYYSLALRSDGTVWAWGDNRYGQLGDGTTT---QRAVPVQVLNLSGVM--NL 241
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
+ G H+ AL S G+++AWG + GQLG G T F P+ V + V
Sbjct: 242 SAGSFHTVALRSDGSVWAWGFNAYGQLGDGTTTSRFQ-------------PVQVGLSDVL 288
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
+ G+ H+L DG + WG N Y Q + +T + PV + L AG HS
Sbjct: 289 TLVAGNYHSLAVRSDGAVWAWGDNRYRQLGDGTTTSS--RVPVQSGLSGGVTLVAGYKHS 346
Query: 409 AVL 411
VL
Sbjct: 347 LVL 349
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 143/318 (44%), Gaps = 44/318 (13%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A + ++ WG N GQ G + R P Q+ L G A ++ G H+ A
Sbjct: 449 LKADTTVWAWGVNEHGQLGDGTLTDRTR-PVQVA-GLSGVSA--------VSAGSYHSLA 498
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ S+GT++ WG N +GQLGDGT R P +V L V +++ G + A+ +D
Sbjct: 499 LRSNGTVWAWGFNRYGQLGDGTNTDRLQPVQVAGLSG--VVAVAAGDSHSLAL----RSD 552
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
GT+ W WG N GS R + + VS G H +AL G +
Sbjct: 553 GTV-----WAWGYNFDGQIGDGSYSWRFLPVQVVGLSGVVSVSAGGYHSLALRSDGTVWT 607
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WGYN GQLG G T P + G L + + G YHS + +G V+
Sbjct: 608 WGYNGSGQLGDGSTAINKPAPVQVAG----------LSGVVSLGSGNYHSLGLRSDGTVW 657
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
WG GQLG SL P RV L G+ V G HS A S G ++AWG +
Sbjct: 658 AWGFNFDGQLGDGSLL---NRSTPVRVSGLSGVV--SVVAGDYHSLARRSDGTVWAWGYN 712
Query: 311 QAGQLGLGPQTRSFSLIP 328
GQLG G TR+ +L+P
Sbjct: 713 GEGQLGDG--TRNDTLVP 728
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 119/409 (29%), Positives = 169/409 (41%), Gaps = 91/409 (22%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + A++ WG N Q G G R+P Q G G + + G++H+
Sbjct: 300 VRSDGAVWAWGDNRYRQLG-DGTTTSSRVPVQ-----SGLSGG-----VTLVAGYKHSLV 348
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK------------QLQSEFVKS------ 118
+ SDGT+++WG N FGQLGDGT R KV QL S + S
Sbjct: 349 LRSDGTVWSWGDNVFGQLGDGTFNPRSSAVKVSWLSLGRADVSSGQLHSVVLDSNGAVWA 408
Query: 119 --------ISCGAHCTAAIAEPRENDGTISTS-------------RLWVWGQNQGSNFPR 157
+ G + +A P G+++ S +W WG N+
Sbjct: 409 WGDNYSGQLGNGTGLDSLVAAPVGLGGSVAVSAGFKHTLVLKADTTVWAWGVNEHGQLGD 468
Query: 158 LFWGAFTPNTIICQV---------SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGL 208
G T T QV S GS H +AL G + AWG+N YGQLG G + L
Sbjct: 469 ---GTLTDRTRPVQVAGLSGVSAVSAGSYHSLALRSNGTVWAWGFNRYGQLGDGTNTDRL 525
Query: 209 QGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSG 268
Q P + G L + V+ G+ HS A+ +G V+ WG GQ+G S
Sbjct: 526 Q-PVQVAG----------LSGVVAVAAGDSHSLALRSDGTVWAWGYNFDGQIGDGSYS-- 572
Query: 269 DKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIP 328
LP V + + V+ GG HS AL S G ++ WG + +GQLG G
Sbjct: 573 -WRFLP--VQVVGLSGVVSVSAGGYHSLALRSDGTVWTWGYNGSGQLGDG---------- 619
Query: 329 NESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
S + P+ V +GV + G+ H+L DG + WG+N GQ
Sbjct: 620 --STAINKPAPVQVAGLSGVVSLGSGNYHSLGLRSDGTVWAWGFNFDGQ 666
>gi|432098306|gb|ELK28108.1| X-linked retinitis pigmentosa GTPase regulator, partial [Myotis
davidii]
Length = 1369
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 129/408 (31%), Positives = 187/408 (45%), Gaps = 44/408 (10%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ACG EHTA + + L+ +G N++GQLG G++ P VK L+ E VK ++CG + T
Sbjct: 34 LACGDEHTAVITGNKKLYMFGRNDWGQLGLGSKSAVCKPTCVKALKPEKVKHVACGRNHT 93
Query: 127 AAIAEPRE-------NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHV 179
E + N+G + G + N L FT Q+S GS
Sbjct: 94 LVSTEGGKVYAVGGNNEGQLG------LGDTEDRNTFHLIE-FFTSQHQFKQLSAGSNTS 146
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
AL+E G L WG N GQ+G C F E + I +SCG YH
Sbjct: 147 AALTEDGKLFMWGENSEGQIGLNNVCN-----------VYFPHEVTVGKPIAWISCGYYH 195
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT 299
SA V+ GE+YT+G G+LG Q +P+ V + I+ VACGG H+ LT
Sbjct: 196 SAFVTMEGELYTFGEPEFGKLG-LPKQLLMNHKVPQLVPGIPEKVIQ-VACGGGHTVVLT 253
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
K A+Y +G Q GQLGLG +F +T I V + + ++CG +HT +
Sbjct: 254 EK-AVYNFGLGQFGQLGLG----TFVF-----ETTEPKIMESVKDHKITYISCGENHTAL 303
Query: 360 YMRDGRIHGWGYNSYGQ--AANEKSTYAWYPSPV-DWCVGEVRKLAAGGGHSAVLADACS 416
GR++ +G YG+ E T + P+ ++ +V +A GG H V A
Sbjct: 304 ITDIGRMYTFGDGRYGKLGLGMENFTNQFVPTLCPNFLRFKVHLVACGGCHMVVFATPRP 363
Query: 417 LKELCEF-RLAESVTLSNAS-EIEDVASRT--GSEALARLCERLREHS 460
+ E E ++ +S + AS I D+ SR AR+ R RE S
Sbjct: 364 VIEKIELGKIRDSRIPAAASLSITDLTSRNIFHRTLSARVRRREREKS 411
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 124/278 (44%), Gaps = 39/278 (14%)
Query: 144 LWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
++ +G+ + N P FW N I ++CG H ++ L +G N++GQLG G
Sbjct: 8 VFTFGKTKFAENTPSKFWFK---NDIPTFLACGDEHTAVITGNKKLYMFGRNDWGQLGLG 64
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
+ + P +K A + EK+ V+CG H+ +E G+VY G + GQLG
Sbjct: 65 -SKSAVCKPTCVK--------ALKPEKVKHVACGRNHTLVSTEGGKVYAVGGNNEGQLGL 115
Query: 263 CSLQSGDKELLPRRVVALDGIF-----IKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GD E R L F K ++ G S ALT G L+ WG + GQ+GL
Sbjct: 116 -----GDTE--DRNTFHLIEFFTSQHQFKQLSAGSNTSAALTEDGKLFMWGENSEGQIGL 168
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
N + YF + + V + ++CG+ H+ +G ++ +G +G+
Sbjct: 169 N----------NVCNVYFPH--EVTVGKPIAWISCGYYHSAFVTMEGELYTFGEPEFGKL 216
Query: 378 ANEKSTYAWYPSP--VDWCVGEVRKLAAGGGHSAVLAD 413
K + P V +V ++A GGGH+ VL +
Sbjct: 217 GLPKQLLMNHKVPQLVPGIPEKVIQVACGGGHTVVLTE 254
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 96/233 (41%), Gaps = 49/233 (21%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+++WG N GQ G + P ++ G W I+CG+ H+A V +G
Sbjct: 155 LFMWGENSEGQIGLNNV-CNVYFPHEV-------TVGKPIAW--ISCGYYHSAFVTMEGE 204
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQ---SEFVKSISCGAHCTAAIAEPRENDGTI 139
L+T+G EFG+LG + H KV QL E V ++CG T + E
Sbjct: 205 LYTFGEPEFGKLGLPKQLLMNH--KVPQLVPGIPEKVIQVACGGGHTVVLTE-------- 254
Query: 140 STSRLWVWGQNQGSNFPRLFWGAFTPNTI------------ICQVSCGSVHVVALSECGL 187
++ +G Q F +L G F T I +SCG H +++ G
Sbjct: 255 --KAVYNFGLGQ---FGQLGLGTFVFETTEPKIMESVKDHKITYISCGENHTALITDIGR 309
Query: 188 LQAWGYNEYGQLGRGITCEGLQG-PRVIKGYAKFLDEAPELEKITQVSCGEYH 239
+ +G YG+LG G+ Q P + + +F K+ V+CG H
Sbjct: 310 MYTFGDGRYGKLGLGMENFTNQFVPTLCPNFLRF--------KVHLVACGGCH 354
>gi|291221016|ref|XP_002730519.1| PREDICTED: predicted protein-like, partial [Saccoglossus
kowalevskii]
Length = 353
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 172/368 (46%), Gaps = 56/368 (15%)
Query: 16 NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTA 75
+IP AI+ +G + R LP + + N + + I+CG EH+A
Sbjct: 8 DIPETGAIFTFG--------------KSRFADNLPSKFWI----RNDKAMHISCGDEHSA 49
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPR- 133
+ G L+T+G+N++GQLG G + P VK L+ E V ++CG +H R
Sbjct: 50 IITESGRLYTFGSNDWGQLGLGHMKPTTKPGCVKSLKQEGVNLVACGRSHTIVCTKAGRL 109
Query: 134 -----ENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+DG + T G Q + P+L P +S G+ H AL+ G L
Sbjct: 110 YSFGAGSDGQLGT------GDAQCATSPQLIN---LPEQKYKLLSAGTDHSAALTTDGTL 160
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG GQLG G T + ++ P+ +K ++ ++ VSCG YH+A V+++G+
Sbjct: 161 YMWGSGSEGQLGLGNT-DSVETPKELKFHS----------SVSWVSCGYYHTAIVTDDGK 209
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
+YT+G G+LG Q D P+ V ++ IK VACGG H+ ++ G LY +G
Sbjct: 210 LYTFGEKEFGKLGLTEDQLEDTT-TPKHVESITEK-IKLVACGGAHTAVISDVGNLYTFG 267
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHG 368
GQLG GP SL P + + + + V+CG +HT V G ++
Sbjct: 268 DGMHGQLGNGPSLLQLSL-PQKV--------ARLSEHKCKYVSCGDNHTAVITEKGAMYT 318
Query: 369 WGYNSYGQ 376
+G +G+
Sbjct: 319 FGDGRHGK 326
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 139/289 (48%), Gaps = 34/289 (11%)
Query: 134 ENDGTI-STSRLWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
++D I T ++ +G+++ N P FW N +SCG H ++E G L +
Sbjct: 4 DDDADIPETGAIFTFGKSRFADNLPSKFW---IRNDKAMHISCGDEHSAIITESGRLYTF 60
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G N++GQLG G P G K L + E + V+CG H+ ++ G +Y+
Sbjct: 61 GSNDWGQLGLG-----HMKPTTKPGCVKSLKQ----EGVNLVACGRSHTIVCTKAGRLYS 111
Query: 252 WGLGSVGQLGHCSLQSGDKELLPR-RVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
+G GS GQLG +GD + +++ L K ++ G HS ALT+ G LY WG
Sbjct: 112 FGAGSDGQLG-----TGDAQCATSPQLINLPEQKYKLLSAGTDHSAALTTDGTLYMWGSG 166
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWG 370
GQLGLG T S P E L + V V+CG+ HT + DG+++ +G
Sbjct: 167 SEGQLGLG-NTDSVE-TPKE----------LKFHSSVSWVSCGYYHTAIVTDDGKLYTFG 214
Query: 371 YNSYGQA--ANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSL 417
+G+ ++ P V+ +++ +A GG H+AV++D +L
Sbjct: 215 EKEFGKLGLTEDQLEDTTTPKHVESITEKIKLVACGGAHTAVISDVGNL 263
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 154/356 (43%), Gaps = 59/356 (16%)
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
A + G +FT+G + F P K ++++ ISCG +A I E
Sbjct: 7 ADIPETGAIFTFGKSRFAD---------NLPSKF-WIRNDKAMHISCGDEHSAIITE--- 53
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-----------ICQVSCGSVHVVALS 183
+ RL+ +G N ++ +L G P T + V+CG H + +
Sbjct: 54 ------SGRLYTFGSN---DWGQLGLGHMKPTTKPGCVKSLKQEGVNLVACGRSHTIVCT 104
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ G L ++G GQLG G + P++I PE +K +S G HSAA+
Sbjct: 105 KAGRLYSFGAGSDGQLGTG-DAQCATSPQLI--------NLPE-QKYKLLSAGTDHSAAL 154
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+ +G +Y WG GS GQLG L + D P+ + + V+CG H+ +T G
Sbjct: 155 TTDGTLYMWGSGSEGQLG---LGNTDSVETPKELKFHSSVSW--VSCGYYHTAIVTDDGK 209
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 363
LY +G + G+LGL + P ++ + ++LVACG +HT V
Sbjct: 210 LYTFGEKEFGKLGLTEDQLEDTTTPKHVES---------ITEKIKLVACGGAHTAVISDV 260
Query: 364 GRIHGWGYNSYGQAANEKSTYAW-YPSPV-DWCVGEVRKLAAGGGHSAVLADACSL 417
G ++ +G +GQ N S P V + + ++ G H+AV+ + ++
Sbjct: 261 GNLYTFGDGMHGQLGNGPSLLQLSLPQKVARLSEHKCKYVSCGDNHTAVITEKGAM 316
>gi|260802292|ref|XP_002596026.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
gi|229281280|gb|EEN52038.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
Length = 1015
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 180/388 (46%), Gaps = 63/388 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++ WG +G+ G G E + + PK+ P GA +++CG +HT V ++G
Sbjct: 1 MFCWGAARNGELGLGGIEEDVILAPKEQP-------FGATKAMREVSCGRQHTVFVLAEG 53
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
T++T G+N++GQLG ++G K P + L ++ ++ +SCG + + ND
Sbjct: 54 TVYTCGSNDYGQLGQ--DKGHKRPTVITALDTQSIQQVSCGDYHNLVV-----ND----K 102
Query: 142 SRLWVWGQNQ-----------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
+++ WG + G+N R + I QV+CG H +ALS G + +
Sbjct: 103 YQVFSWGYDDCGQLGHTLEAGGNNSRRPRMVKELSSLQIVQVACGGKHSLALSNDGRIFS 162
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT-----QVSCGEYHSAAVSE 245
WG N +GQLG G T K + EL +T Q+ G HS +S+
Sbjct: 163 WGNNSHGQLGIGST--------------KNQPKPQELTSLTGIPFCQIVAGGSHSFVLSK 208
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G V+ +G + GQLG +GD++ P V +L + + ++CG H+ LT G +
Sbjct: 209 SGAVFGFGRNTFGQLGLGD--TGDRK-YPTHVKSLRSLKVTHISCGEEHTAVLTLDGGVL 265
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR-DG 364
+G GQLG N + R + L+ QL ACG HT+ Y+ G
Sbjct: 266 TFGAGSYGQLGHN---------SNNHEALPRKVFELMGLEVTQL-ACGRMHTMAYVESSG 315
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPVD 392
RI+ +G GQ ++ +T P VD
Sbjct: 316 RIYSFGLGGNGQLGSKGTTNCNTPITVD 343
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/243 (35%), Positives = 124/243 (51%), Gaps = 22/243 (9%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
+VSCG H V + G + G N+YGQLG+ +G + P VI A + + I
Sbjct: 38 EVSCGRQHTVFVLAEGTVYTCGSNDYGQLGQD---KGHKRPTVIT--------ALDTQSI 86
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
QVSCG+YH+ V++ +V++WG GQLGH G+ PR V L + I VAC
Sbjct: 87 QQVSCGDYHNLVVNDKYQVFSWGYDDCGQLGHTLEAGGNNSRRPRMVKELSSLQIVQVAC 146
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
GG HS AL++ G +++WG + GQLG+G P E T IP Q+V
Sbjct: 147 GGKHSLALSNDGRIFSWGNNSHGQLGIGSTKNQPK--PQEL-TSLTGIPF------CQIV 197
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSA 409
A G SH+ V + G + G+G N++GQ + YP+ V +V ++ G H+A
Sbjct: 198 AGG-SHSFVLSKSGAVFGFGRNTFGQLGLGDTGDRKYPTHVKSLRSLKVTHISCGEEHTA 256
Query: 410 VLA 412
VL
Sbjct: 257 VLT 259
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 117/256 (45%), Gaps = 42/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRK-----GRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHT 74
K ++ WGY+ GQ G R+ R+ K+L ++ + + +ACG +H+
Sbjct: 102 KYQVFSWGYDDCGQLGHTLEAGGNNSRRPRMVKEL----------SSLQIVQVACGGKHS 151
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHCT------A 127
A+++DG +F+WG N GQLG G+ + + P+++ L F + ++ G+H A
Sbjct: 152 LALSNDGRIFSWGNNSHGQLGIGSTKNQPKPQELTSLTGIPFCQIVAGGSHSFVLSKSGA 211
Query: 128 AIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
R G + G +P + + +SCG H L+ G
Sbjct: 212 VFGFGRNTFGQLG------LGDTGDRKYPTHVKSLRSLK--VTHISCGEEHTAVLTLDGG 263
Query: 188 LQAWGYNEYGQLGRGITC-EGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG E L PR + E LE +TQ++CG H+ A V
Sbjct: 264 VLTFGAGSYGQLGHNSNNHEAL--PRKVF-------ELMGLE-VTQLACGRMHTMAYVES 313
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 314 SGRIYSFGLGGNGQLG 329
>gi|313236983|emb|CBY12230.1| unnamed protein product [Oikopleura dioica]
Length = 1048
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 117/403 (29%), Positives = 168/403 (41%), Gaps = 64/403 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG N GQ G + P P AN + IA G HT + S
Sbjct: 1 MYGWGKNDYGQLGLGSENMLISCPS---------PIDANQSVISIASGLRHTVYLTSTRK 51
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+++ G+NEFGQLG + R P V +E + ++ G + AIAE +
Sbjct: 52 VYSCGSNEFGQLGQQKSQCR--PSLVTGFGAEEIFHVAAGDFFSIAIAE---------SG 100
Query: 143 RLWVWGQNQGSNF---------PRLF-----WGAFTPNTIICQVSCGSVHVVALSECGLL 188
L+ WG++ P+L W + QV+CG+ H +AL+E G +
Sbjct: 101 LLFGWGRSLNGELMCKQDSLHEPKLLDKIMHWS-------VVQVACGAQHCIALTEEGTI 153
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG N GQLG G + P +I F I+Q+ G YHS +S +G
Sbjct: 154 LSWGSNTQGQLGLGSSEIEFLEPTIIASLNAF--------PISQICAGAYHSGVLSPSGT 205
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
++TWG + GQLGH + S PR V L + VA G HS T G +++WG
Sbjct: 206 LFTWGKNNWGQLGHGNSDSFQSS--PRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWG 263
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHG 368
GQLG T + I L+ Q + CG HT+ ++ G
Sbjct: 264 HGGNGQLGHNSMANV---------TQPKKIMELMGTTVCQ-ICCGRRHTISLTDKRKLLG 313
Query: 369 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL---AAGGGHS 408
+G NS Q T A P + + + R+L AAGG S
Sbjct: 314 FGLNSNNQLGTHNDTSARLPITIPISLTDDRQLSCIAAGGDQS 356
>gi|323453709|gb|EGB09580.1| hypothetical protein AURANDRAFT_53279 [Aureococcus anophagefferens]
Length = 558
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 157/350 (44%), Gaps = 49/350 (14%)
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
A +R + + CG H AAV G WG+NEFGQLG G E P K + +K++
Sbjct: 175 ARARVVSLDCGWLHAAAVLECGQALAWGSNEFGQLGTGDELKSAEPVACKVDRDIRLKTV 234
Query: 120 SCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT-----------PNTI 168
CG++ T A+ + E LW WG+ Q SN+P F +
Sbjct: 235 VCGSYYTMALDDKGE---------LWSWGRYQASNWPSKFADTWVNGYAKRGELGIKGET 285
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQ-GPRVIKGYAKFLDEAPEL 227
I ++ G H++A E G L +WGYNE QLG G +G Q PR +K + + E P
Sbjct: 286 IALLAGGESHMLAAMESGKLFSWGYNEQLQLGIGDEKDGGQMKPREVK-FKELTKENP-- 342
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+ ++CG H+ ++G+++ WG S GQ+GH ++ + P+ V +++ D
Sbjct: 343 --VAALACGGLHTIVALKDGKMFGWGNNSEGQIGHILRKNFGE---PQEVSSMEHEPAVD 397
Query: 288 VACGGVHSCALTSKGALYAW----GGSQAGQLGLGPQTRSFSLIPNESDTY--------- 334
V+CG + A + Y W G + G GP E+ +
Sbjct: 398 VSCGRYSTLATSDTKCAYFWGSLTGSANQGAPSTGPDGEEKKPDEGEAPDFGGESKSKYG 457
Query: 335 -------FRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+V V L A G +H +++ ++G + GWGYN+YGQA
Sbjct: 458 GGAASRMLAGAAKQLVGTDVVLGAIGEAHGILHFKNGCLDGWGYNAYGQA 507
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 91/244 (37%), Gaps = 49/244 (20%)
Query: 23 IYVWGYNHSGQ-------TGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTA 75
++ WGYN Q G + + R+++ K+L E P A +ACG HT
Sbjct: 305 LFSWGYNEQLQLGIGDEKDGGQMKPREVKF-KELTKE---NPVAA------LACGGLHTI 354
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
DG +F WG N GQ+G + P++V ++ E +SCG + T A ++ +
Sbjct: 355 VALKDGKMFGWGNNSEGQIGHILRKNFGEPQEVSSMEHEPAVDVSCGRYSTLATSDTK-- 412
Query: 136 DGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNE 195
FWG+ T + S G + G +G
Sbjct: 413 --------------------CAYFWGSLTGSANQGAPSTGPDGEEKKPDEGEAPDFGGES 452
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
+ G G R++ G AK L + + GE H +NG + WG
Sbjct: 453 KSKYGGGAAS------RMLAGAAKQLVGT----DVVLGAIGEAHGILHFKNGCLDGWGYN 502
Query: 256 SVGQ 259
+ GQ
Sbjct: 503 AYGQ 506
>gi|337751269|ref|YP_004645431.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
KNP414]
gi|336302458|gb|AEI45561.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
KNP414]
Length = 404
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 108/343 (31%), Positives = 163/343 (47%), Gaps = 51/343 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I ++ WGYN G+ G+ I + P ++ G + ++ G H+ A
Sbjct: 99 ITKHGTVWGWGYNSKGEITEGGK----NIAR--PVQINGLK-----DIVQVSTGLVHSLA 147
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ G +++WG N +GQLG+GT + P KV+ L + + +I GA + A++ ND
Sbjct: 148 LDQSGAVWSWGENIYGQLGNGTNQDSSIPTKVEFLSN--IVAIEAGAEHSLALS----ND 201
Query: 137 GTISTSRLWVWGQNQ----------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
G ++W WG+N+ SN PRL I ++ G H +AL G
Sbjct: 202 G-----KVWAWGRNEFGQLGNGETEKSNIPRLVKNLEN----IEMIAGGDNHSLALDHDG 252
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE----KITQVSCGEYHSAA 242
+ AWGYN GQ+G G + + ++ + K E +L K+ QVS G HS A
Sbjct: 253 AIWAWGYNSNGQIGDGSSNVYEKDGQLREKRNK--TEPVKLNGLYGKVKQVSAGIKHSTA 310
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
++ENGEVY WG GQLG+ S++ D ++ R V G I D+ G HS A+ G
Sbjct: 311 LTENGEVYAWGWNEYGQLGNGSMK--DSKVPLRNNV---GRSIIDIETGSYHSFAVDESG 365
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
+YAWG + GQLG G +F N R PI++ N
Sbjct: 366 VIYAWGDATYGQLGDG----TFGKDGNRITYMVRMNPIVIKIN 404
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/329 (32%), Positives = 148/329 (44%), Gaps = 49/329 (14%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
+ I G + + SDGT++T G N GQLG+GTE+ + KV +L V S+
Sbjct: 37 VSINAGGYVSTILRSDGTVWTTGRNNVGQLGNGTEKDSSYFGKVDELYD--VVSLDSDMD 94
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQ-------GSNFPRLFWGAFTPNTIICQVSCGSV 177
T AI + GT+ W WG N G N R I QVS G V
Sbjct: 95 HTLAITKH----GTV-----WGWGYNSKGEITEGGKNIARPV--QINGLKDIVQVSTGLV 143
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H +AL + G + +WG N YGQLG G + + + L I + G
Sbjct: 144 HSLALDQSGAVWSWGENIYGQLGNGTNQD-----------SSIPTKVEFLSNIVAIEAGA 192
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
HS A+S +G+V+ WG GQLG+ + K +PR V L+ I + +A G HS A
Sbjct: 193 EHSLALSNDGKVWAWGRNEFGQLGNGETE---KSNIPRLVKNLENIEM--IAGGDNHSLA 247
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYF---RNIPILVVPNG----VQLV 350
L GA++AWG + GQ+G G E D RN V NG V+ V
Sbjct: 248 LDHDGAIWAWGYNSNGQIGDGSSNVY------EKDGQLREKRNKTEPVKLNGLYGKVKQV 301
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQAAN 379
+ G H+ +G ++ WG+N YGQ N
Sbjct: 302 SAGIKHSTALTENGEVYAWGWNEYGQLGN 330
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 146/319 (45%), Gaps = 48/319 (15%)
Query: 109 KQLQSEFVKSISCGAHCTAAIAEPRENDGTI-STSRLWVWGQNQGSNFPRLFWGAFTPNT 167
K +S V SI+ G + + + +DGT+ +T R V G+ ++G
Sbjct: 29 KNSESTSVVSINAGGYVSTIL----RSDGTVWTTGRNNVGQLGNGTEKDSSYFGKVDELY 84
Query: 168 IICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL 227
+ + H +A+++ G + WGYN G++ G + + P I G L
Sbjct: 85 DVVSLDSDMDHTLAITKHGTVWGWGYNSKGEITEG--GKNIARPVQING----------L 132
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+ I QVS G HS A+ ++G V++WG GQLG+ + Q +P +V L I
Sbjct: 133 KDIVQVSTGLVHSLALDQSGAVWSWGENIYGQLGNGTNQDSS---IPTKVEFLSNIVA-- 187
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NG 346
+ G HS AL++ G ++AWG ++ GQLG G +S NIP LV
Sbjct: 188 IEAGAEHSLALSNDGKVWAWGRNEFGQLGNGETEKS-------------NIPRLVKNLEN 234
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTY------------AWYPSPVDWC 394
++++A G +H+L DG I WGYNS GQ + S P ++
Sbjct: 235 IEMIAGGDNHSLALDHDGAIWAWGYNSNGQIGDGSSNVYEKDGQLREKRNKTEPVKLNGL 294
Query: 395 VGEVRKLAAGGGHSAVLAD 413
G+V++++AG HS L +
Sbjct: 295 YGKVKQVSAGIKHSTALTE 313
>gi|302760205|ref|XP_002963525.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
gi|300168793|gb|EFJ35396.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
Length = 430
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 157/325 (48%), Gaps = 51/325 (15%)
Query: 67 IACGHEHTAAV-ASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AH 124
+ACG +HT A A+ T+++WG +FG+LG G P +K LQ ++ I+CG +H
Sbjct: 62 VACGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIACGDSH 121
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTIIC-------QVS 173
C A A+ ++ WG+NQ +L G + P+ ++ ++
Sbjct: 122 CLAVTAD----------GEVYSWGRNQNG---QLGLGDTDDSLVPHKLLAFEGVSVKMLA 168
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL--EKIT 231
G+ H A+++ G L WG+ YG LG G +G R++ E P + EK+
Sbjct: 169 AGAEHTAAVTDGGKLYGWGWGRYGNLGLGD-----RGDRMLPA------EVPAVGDEKMC 217
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
V+CG H+ AVS++G++YT+G GQLGH LLP +V AL I V+ G
Sbjct: 218 MVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYAD---HLLPHQVAALAEFNITQVSGG 274
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVA 351
H+ ALT G LY WG ++ GQ+G G + + + +IP V V+
Sbjct: 275 WRHTVALTEAGKLYGWGWNKFGQVGSGD-------VDDHTSPQLISIP--GQHQRVVQVS 325
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQ 376
CG HT+ ++ WG + GQ
Sbjct: 326 CGWRHTVAVTDKNNVYSWGRGTSGQ 350
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/317 (32%), Positives = 155/317 (48%), Gaps = 42/317 (13%)
Query: 15 DNIPAKSA----IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACG 70
D+ A SA IY WG+ G+ G G L +P + G R IACG
Sbjct: 67 DHTTAYSATRLTIYSWGWGDFGRLGH-GNSSDLFVPHPIK-----ALQGLEIR--QIACG 118
Query: 71 HEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIA 130
H AV +DG +++WG N+ GQLG G + P K+ + VK ++ GA TAA+
Sbjct: 119 DSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVT 178
Query: 131 EPRENDGTISTSRLWVWGQ----NQGSNFPRLFWGAFTP---NTIICQVSCGSVHVVALS 183
+ + G W WG+ G R+ A P + +C V+CG H +A+S
Sbjct: 179 DGGKLYG-------WGWGRYGNLGLGDRGDRML-PAEVPAVGDEKMCMVACGWRHTIAVS 230
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ G L +G+++YGQLG G + L P + A+F ITQVS G H+ A+
Sbjct: 231 QSGKLYTYGWSKYGQLGHGDYADHLL-PHQVAALAEF--------NITQVSGGWRHTVAL 281
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF--IKDVACGGVHSCALTSK 301
+E G++Y WG GQ+G + D P +++++ G + V+CG H+ A+T K
Sbjct: 282 TEAGKLYGWGWNKFGQVGSGDV---DDHTSP-QLISIPGQHQRVVQVSCGWRHTVAVTDK 337
Query: 302 GALYAWGGSQAGQLGLG 318
+Y+WG +GQLG G
Sbjct: 338 NNVYSWGRGTSGQLGHG 354
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/326 (31%), Positives = 156/326 (47%), Gaps = 44/326 (13%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
L ++ G HT A+ S + ++G E GQLG G E R P + L + ++CGA
Sbjct: 8 LLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRHLPRIIGALNDCEISLVACGAD 67
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVS 173
T A + R T W WG +F RL G F P+ I I Q++
Sbjct: 68 HTTAYSATR------LTIYSWGWG-----DFGRLGHGNSSDLFVPHPIKALQGLEIRQIA 116
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
CG H +A++ G + +WG N+ GQLG G T + L +++ A E + +
Sbjct: 117 CGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLL---------AFEGVSVKML 167
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
+ G H+AAV++ G++Y WG G G LG L +LP V A+ + VACG
Sbjct: 168 AAGAEHTAAVTDGGKLYGWGWGRYGNLG---LGDRGDRMLPAEVPAVGDEKMCMVACGWR 224
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG 353
H+ A++ G LY +G S+ GQLG G L+P++ + L N Q V+ G
Sbjct: 225 HTIAVSQSGKLYTYGWSKYGQLGHGDYAD--HLLPHQ-------VAALAEFNITQ-VSGG 274
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQAAN 379
HT+ G+++GWG+N +GQ +
Sbjct: 275 WRHTVALTEAGKLYGWGWNKFGQVGS 300
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 93/195 (47%), Gaps = 21/195 (10%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFI 285
K+ VS G H+ A+ V ++G G GQLGH GD E LPR + AL+ I
Sbjct: 5 RKVLLVSAGASHTVALLSGQVVCSFGRGEDGQLGH-----GDAEDRHLPRIIGALNDCEI 59
Query: 286 KDVACGGVHSCALT-SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP 344
VACG H+ A + ++ +Y+WG G+LG G N SD + + PI +
Sbjct: 60 SLVACGADHTTAYSATRLTIYSWGWGDFGRLGHG----------NSSDLFVPH-PIKALQ 108
Query: 345 N-GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLA 402
++ +ACG SH L DG ++ WG N GQ + + P + G V+ LA
Sbjct: 109 GLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLA 168
Query: 403 AGGGHSAVLADACSL 417
AG H+A + D L
Sbjct: 169 AGAEHTAAVTDGGKL 183
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG+N GQ G + P+L P G + R + ++CG HT AV
Sbjct: 287 LYGWGWNKFGQVGSG------DVDDHTSPQLISIP-GQHQRVVQVSCGWRHTVAVTDKNN 339
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSE 114
+++WG GQLG G R P+ ++ L ++
Sbjct: 340 VYSWGRGTSGQLGHGDAVDRSAPKGIQALSAD 371
>gi|302876126|ref|YP_003844759.1| chromosome condensation regulator RCC1 [Clostridium cellulovorans
743B]
gi|302578983|gb|ADL52995.1| regulator of chromosome condensation RCC1 [Clostridium
cellulovorans 743B]
Length = 852
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 151/325 (46%), Gaps = 47/325 (14%)
Query: 62 SRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC 121
S ++ ++ G+ T A+ +DGT+++WG N+ G LGDGT P +VK L + +IS
Sbjct: 35 SGYIAVSAGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNSPVQVKGLNG--ITAISA 92
Query: 122 G-AHCTAAIAEPRENDGTISTSRLWVWG------QNQGSNFPRLFWGAFTPNTIICQVSC 174
G AH A ++DGT+ W WG G+N R T I +S
Sbjct: 93 GWAHFVA-----LKSDGTV-----WTWGVGYSGELGDGTNSLRTTPAPINGLTGITAISA 142
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G H +AL G L +WG N+YGQLG G T + + P IT +S
Sbjct: 143 GWNHTLALKADGTLWSWGQNQYGQLGTGNTTN-----------SNIPLQVPGQIGITSIS 191
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVH 294
G HS + +G V++WG + GQLG+ + P ++ L+GI +V+ G +H
Sbjct: 192 SGGGHSLVIKNDGTVWSWGCNNFGQLGNG---TNSNNPTPHQISGLNGII--NVSAGVIH 246
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGH 354
S AL S G ++ WG + G+L G + S+ IP +++ NG+ + G
Sbjct: 247 STALKSDGTVWNWGCNFRGELANGNKIDSY--IPVQANGL----------NGIIAITAGW 294
Query: 355 SHTLVYMRDGRIHGWGYNSYGQAAN 379
+ DG WG N YGQ N
Sbjct: 295 EFSSAIKSDGTFWVWGVNDYGQLGN 319
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 113/368 (30%), Positives = 159/368 (43%), Gaps = 69/368 (18%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++ WG+N +G G G P Q+ L G A I+ G H A+ SDG
Sbjct: 55 TVWSWGFNQNGHLG-DGTTSNSNSPVQVK-GLNGITA--------ISAGWAHFVALKSDG 104
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
T++TWG G+LGDGT R P + L + +IS G + T A+ + DGT
Sbjct: 105 TVWTWGVGYSGELGDGTNSLRTTPAPINGLTG--ITAISAGWNHTLAL----KADGT--- 155
Query: 142 SRLWVWGQNQ----------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
LW WGQNQ SN P G I +S G H + + G + +W
Sbjct: 156 --LWSWGQNQYGQLGTGNTTNSNIPLQVPGQIG----ITSISSGGGHSLVIKNDGTVWSW 209
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G N +GQLG G T P I G L I VS G HS A+ +G V+
Sbjct: 210 GCNNFGQLGNG-TNSNNPTPHQISG----------LNGIINVSAGVIHSTALKSDGTVWN 258
Query: 252 WGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
WG G+L + G+K +P + L+GI + G S A+ S G + WG
Sbjct: 259 WGCNFRGELAN-----GNKIDSYIPVQANGLNGIIA--ITAGWEFSSAIKSDGTFWVWGV 311
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHG 368
+ GQLG G ++ S P+ V +G+ + G ++T+ DG I
Sbjct: 312 NDYGQLGNGSKSDVTS-------------PMQVSSLSGITAIDTGATYTVALKTDGNIFA 358
Query: 369 WGYNSYGQ 376
+G N+YGQ
Sbjct: 359 FGENTYGQ 366
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/256 (32%), Positives = 119/256 (46%), Gaps = 34/256 (13%)
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
VS G+ +AL G + +WG+N+ G LG G T P +KG L IT
Sbjct: 40 VSAGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNS-NSPVQVKG----------LNGIT 88
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
+S G H A+ +G V+TWG+G G+LG + P + L GI ++ G
Sbjct: 89 AISAGWAHFVALKSDGTVWTWGVGYSGELGDGT---NSLRTTPAPINGLTGI--TAISAG 143
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN--GVQL 349
H+ AL + G L++WG +Q GQLG G T S NIP L VP G+
Sbjct: 144 WNHTLALKADGTLWSWGQNQYGQLGTGNTTNS-------------NIP-LQVPGQIGITS 189
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
++ G H+LV DG + WG N++GQ N ++ P + G + ++AG HS
Sbjct: 190 ISSGGGHSLVIKNDGTVWSWGCNNFGQLGNGTNSNNPTPHQISGLNG-IINVSAGVIHST 248
Query: 410 VL-ADACSLKELCEFR 424
L +D C FR
Sbjct: 249 ALKSDGTVWNWGCNFR 264
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 135/304 (44%), Gaps = 51/304 (16%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++ WG +SG+ G LR L G A I+ G HT A+ +DG
Sbjct: 105 TVWTWGVGYSGELGDG--TNSLRTTPAPINGLTGITA--------ISAGWNHTLALKADG 154
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
TL++WG N++GQLG G P +V Q+ + SIS G + I +NDGT+
Sbjct: 155 TLWSWGQNQYGQLGTGNTTNSNIPLQVPGQIG---ITSISSGGGHSLVI----KNDGTV- 206
Query: 141 TSRLWVWGQNQGSNFPRLFWGAF----TPNTI-----ICQVSCGSVHVVALSECGLLQAW 191
W WG N NF +L G TP+ I I VS G +H AL G + W
Sbjct: 207 ----WSWGCN---NFGQLGNGTNSNNPTPHQISGLNGIINVSAGVIHSTALKSDGTVWNW 259
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G N G+L G I Y +A L I ++ G S+A+ +G +
Sbjct: 260 GCNFRGELANG---------NKIDSYIPV--QANGLNGIIAITAGWEFSSAIKSDGTFWV 308
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG+ GQLG+ S P +V +L GI D G ++ AL + G ++A+G +
Sbjct: 309 WGVNDYGQLGNGSKSDVTS---PMQVSSLSGITAID--TGATYTVALKTDGNIFAFGENT 363
Query: 312 AGQL 315
GQL
Sbjct: 364 YGQL 367
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 137/322 (42%), Gaps = 52/322 (16%)
Query: 104 HPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQG----------S 153
H +KV S ++ ++S G T A+ +NDGT+ W WG NQ S
Sbjct: 26 HSQKVVAGTSGYI-AVSAGNTTTIAL----KNDGTV-----WSWGFNQNGHLGDGTTSNS 75
Query: 154 NFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV 213
N P G I +S G H VAL G + WG G+LG G T P
Sbjct: 76 NSPVQVKGLNG----ITAISAGWAHFVALKSDGTVWTWGVGYSGELGDG-TNSLRTTPAP 130
Query: 214 IKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL 273
I G L IT +S G H+ A+ +G +++WG GQLG + + + +
Sbjct: 131 ING----------LTGITAISAGWNHTLALKADGTLWSWGQNQYGQLGTGNTTNSN---I 177
Query: 274 PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDT 333
P +V GI ++ GG HS + + G +++WG + GQLG G T S + P++
Sbjct: 178 PLQVPGQIGI--TSISSGGGHSLVIKNDGTVWSWGCNNFGQLGNG--TNSNNPTPHQ--- 230
Query: 334 YFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDW 393
+ NG+ V+ G H+ DG + WG N G+ AN ++ P +
Sbjct: 231 -------ISGLNGIINVSAGVIHSTALKSDGTVWNWGCNFRGELANGNKIDSYIPVQANG 283
Query: 394 CVGEVRKLAAGGGHSAVLADAC 415
G + A SA+ +D
Sbjct: 284 LNGIIAITAGWEFSSAIKSDGT 305
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 116/254 (45%), Gaps = 46/254 (18%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++ WG N GQ G G IP Q+P ++ G S I+ G H+
Sbjct: 150 LKADGTLWSWGQNQYGQLGT-GNTTNSNIPLQVPGQI-----GITS----ISSGGGHSLV 199
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPREN 135
+ +DGT+++WG N FGQLG+GT P ++ L + ++S G H TA ++
Sbjct: 200 IKNDGTVWSWGCNNFGQLGNGTNSNNPTPHQISGLNG--IINVSAGVIHSTA-----LKS 252
Query: 136 DGTISTSRLWVWGQN---QGSNFPRLFWGAFTP------NTIICQVSCGSVHVVALSECG 186
DGT+ W WG N + +N ++ ++ P N II ++ G A+ G
Sbjct: 253 DGTV-----WNWGCNFRGELANGNKI--DSYIPVQANGLNGIIA-ITAGWEFSSAIKSDG 304
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
WG N+YGQLG G + + P + L IT + G ++ A+ +
Sbjct: 305 TFWVWGVNDYGQLGNGSKSD-VTSPM----------QVSSLSGITAIDTGATYTVALKTD 353
Query: 247 GEVYTWGLGSVGQL 260
G ++ +G + GQL
Sbjct: 354 GNIFAFGENTYGQL 367
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 10/93 (10%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I + +VWG N GQ G G + + P Q+ L G A I G +T A
Sbjct: 300 IKSDGTFWVWGVNDYGQLGN-GSKSDVTSPMQVS-SLSGITA--------IDTGATYTVA 349
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK 109
+ +DG +F +G N +GQLG+GT G PE V
Sbjct: 350 LKTDGNIFAFGENTYGQLGNGTTTGSTTPELVS 382
>gi|194748527|ref|XP_001956696.1| GF24453 [Drosophila ananassae]
gi|190623978|gb|EDV39502.1| GF24453 [Drosophila ananassae]
Length = 1058
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 160/340 (47%), Gaps = 38/340 (11%)
Query: 83 LFTWGANEFGQLGDGTEEGRK--HPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
L+ WG GQLG G E + P +V +K ++CG T + S
Sbjct: 7 LYCWGNTSHGQLGLGGIEDEQILTPSQVPWTPDSAIKQVACGHRHTLFLT---------S 57
Query: 141 TSRLWVWGQNQ----GSNFP--RLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
+ R++ G N G + P R + ++ Q++CGS H +ALSE G + +WG N
Sbjct: 58 SGRVYACGSNDHSQLGHDLPTKRPLLIPELLDYVVVQIACGSRHSMALSEWGQVLSWGDN 117
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+ GQLG+ + +Q P++++ + + Q++CG HS A++ GE+Y+WG
Sbjct: 118 DCGQLGQATDQDIVQLPKIVRQLVS--------KTVVQIACGNNHSLALTSCGELYSWGS 169
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + P R+ L GI + +ACGG HS ++ A++ WG + GQ
Sbjct: 170 NIYGQLGVNTPKEVTHSNQPVRLTTLLGIPVAAIACGGNHSFIISKSSAVFGWGRNNCGQ 229
Query: 315 LGLGPQT-RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNS 373
LGL +T RS+ P + T R + GV+ VACG ++ +G + G +
Sbjct: 230 LGLNDETSRSY---PTQLKT-LRTL-------GVRFVACGDEFSVFLTNEGGVFTCGAGA 278
Query: 374 YGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
YGQ + P V +G + ++A G H+ L
Sbjct: 279 YGQLGHGFGANEMLPRMVMELMGSTITQVACGNRHTLALV 318
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 175/388 (45%), Gaps = 52/388 (13%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTA 75
+ A + +Y WG GQ G G E Q+ P Q+P P A + +ACGH HT
Sbjct: 1 MTAGTELYCWGNTSHGQLGLGGIEDEQILTPSQVP----WTPDSAIKQ---VACGHRHTL 53
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
+ S G ++ G+N+ QLG R P + +L V I+CG+ + A++E
Sbjct: 54 FLTSSGRVYACGSNDHSQLGHDLPTKR--PLLIPELLDYVVVQIACGSRHSMALSE---- 107
Query: 136 DGTISTSRLWVWGQN------QGSN-----FPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
++ WG N Q ++ P++ + + Q++CG+ H +AL+
Sbjct: 108 -----WGQVLSWGDNDCGQLGQATDQDIVQLPKIVRQLVSKTVV--QIACGNNHSLALTS 160
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
CG L +WG N YGQLG E + ++ L P + ++CG HS +S
Sbjct: 161 CGELYSWGSNIYGQLGVNTPKEVTHSNQPVR--LTTLLGIP----VAAIACGGNHSFIIS 214
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
++ V+ WG + GQLG L P ++ L + ++ VACG S LT++G +
Sbjct: 215 KSSAVFGWGRNNCGQLG---LNDETSRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGV 271
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RD 363
+ G GQLG G ++P + + ++ + + VACG+ HTL +
Sbjct: 272 FTCGAGAYGQLGHGFGAN--EMLP--------RMVMELMGSTITQVACGNRHTLALVPSR 321
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPV 391
GR++G+G S GQ + P V
Sbjct: 322 GRVYGFGLGSSGQLGTRSTKSLTLPQVV 349
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 34/208 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLP--------PELFGCPAGANSRWLDIACGHEHT 74
+Y WG N GQ G + PK++ L G P A IACG H+
Sbjct: 164 LYSWGSNIYGQLG-------VNTPKEVTHSNQPVRLTTLLGIPVAA------IACGGNHS 210
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
++ +F WG N GQLG E R +P ++K L++ V+ ++CG + +
Sbjct: 211 FIISKSSAVFGWGRNNCGQLGLNDETSRSYPTQLKTLRTLGVRFVACGDEFSVFLT---- 266
Query: 135 NDGTISTSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVALSEC-GLL 188
N+G + T +GQ G+N PR+ + I QV+CG+ H +AL G +
Sbjct: 267 NEGGVFTCGAGAYGQLGHGFGANEMLPRMVMELM--GSTITQVACGNRHTLALVPSRGRV 324
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKG 216
+G GQLG T + L P+V+ G
Sbjct: 325 YGFGLGSSGQLGTRST-KSLTLPQVVIG 351
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 21/122 (17%)
Query: 298 LTSKGALYAWGGSQAGQLGLG----PQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG 353
+T+ LY WG + GQLGLG Q + S +P D+ ++ VACG
Sbjct: 1 MTAGTELYCWGNTSHGQLGLGGIEDEQILTPSQVPWTPDS------------AIKQVACG 48
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQAANEKSTY--AWYPSPVDWCVGEVRKLAAGGGHSAVL 411
H HTL GR++ G N + Q ++ T P +D+ V ++ A G HS L
Sbjct: 49 HRHTLFLTSSGRVYACGSNDHSQLGHDLPTKRPLLIPELLDYVVVQI---ACGSRHSMAL 105
Query: 412 AD 413
++
Sbjct: 106 SE 107
>gi|442319627|ref|YP_007359648.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441487269|gb|AGC43964.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 1096
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 125/401 (31%), Positives = 177/401 (44%), Gaps = 55/401 (13%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++ WG N+ GQ G G RQ +P ++ LF A I G H+ A
Sbjct: 62 LKADGTVWSWGGNNYGQLG-TGSTRQNPMPARVW-RLFSITA--------IGAGELHSLA 111
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ SDGT+++WGAN GQLGDGT R P V L + V +I+ G + + + D
Sbjct: 112 LKSDGTVWSWGANTNGQLGDGTLISRSVPAPVPGLTN--VVAIAAGFSHSMVL----KAD 165
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
GT+ W WG N G+ RL T + ++ G+VH +AL+ G L
Sbjct: 166 GTV-----WAWGLNAAGQLGDGTPTRRLTPVQVLGLTGVKDIAAGNVHSLALTADGRLWT 220
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG N GQLG G V + A L P + + +S G HS + +G V+
Sbjct: 221 WGGNVDGQLG--------TGDLVGRSTAAAL---PGMTGVVALSGGGSHSLILKMDGSVW 269
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
+WG GQLG S+ S P +V L + V GG HS AL G ++AWG +
Sbjct: 270 SWGKNDAGQLGLGSVVSTPT---PTQVPGLTEMVA--VTGGGQHSVALRVDGTVWAWGSN 324
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWG 370
QLG G QT+ S T + + A G H++ +G + WG
Sbjct: 325 ARAQLGDGTQTQRLSPCQVTGLTQVKGV-----------AAGGGLHSVAVKGNGEVWAWG 373
Query: 371 YNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
NS GQ + P+ V E ++AGGGH+ L
Sbjct: 374 SNSEGQVGDGTYLMKLVPTTARVLV-ERADVSAGGGHTLAL 413
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 126/400 (31%), Positives = 182/400 (45%), Gaps = 61/400 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G + Q P G A SR +A +++ +A DG+
Sbjct: 720 LWAWGSNAEGQVGDGA------LDWQAAPVRSGLAA---SR--GLAAATQYSLGIALDGS 768
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ + GAN GQLGDGT R P V L ++I+ GA A+ + DG
Sbjct: 769 VQSTGANASGQLGDGTLFPRAEPVPVIGLSE--CRAIAGGATHGLAL----KTDG----- 817
Query: 143 RLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
R+ WG N G+ R P + ++ G+ H +AL G +QAWG N
Sbjct: 818 RVLSWGANAEGELGDGTTVARRAPAVVGPLAGVLSIAVGARHSLALLGDGSVQAWGSNIQ 877
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG G T + P ++G L + ++ G+ S A+ +G V+ WG +
Sbjct: 878 GQLGDGTTVSRVL-PVRVQG----------LTGVAAIAAGDGFSLALKHDGTVWAWGGNT 926
Query: 257 VGQLG-HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
+GQLG + +L+S L+P R AL G + VA G HS AL G L+AWG + G+L
Sbjct: 927 LGQLGDNTTLRS----LVPVRTQALTG--VTAVAAGRNHSLALKGDGTLWAWGSNTYGEL 980
Query: 316 GLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
G G Q R + + S T GV + G H+L G++ GWG N +G
Sbjct: 981 GDGTQARKLAPVQVTSLT------------GVSALDAGDHHSLAVTSGGKVWGWGRNQFG 1028
Query: 376 QAAN-EKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLAD 413
Q KS + P+ V V +A GG HS A+L+D
Sbjct: 1029 QVGKGVKSNWQLLPAQVPGLTSAV-AVAGGGEHSLALLSD 1067
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 167/371 (45%), Gaps = 52/371 (14%)
Query: 50 PPELFGCPAGA--NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEK 107
PPE G A SR + G H+ + +DGT+++WG N +GQLG G+ P +
Sbjct: 33 PPEAPGSARAAEGTSRQGSVLAGRHHSLVLKADGTVWSWGGNNYGQLGTGSTRQNPMPAR 92
Query: 108 VKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQN------QGSNFPRLFWG 161
V +L S + +I G + A+ ++DGT+ W WG N G+ R
Sbjct: 93 VWRLFS--ITAIGAGELHSLAL----KSDGTV-----WSWGANTNGQLGDGTLISRSVPA 141
Query: 162 AFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFL 221
T + ++ G H + L G + AWG N GQLG G L +V+
Sbjct: 142 PVPGLTNVVAIAAGFSHSMVLKADGTVWAWGLNAAGQLGDGTPTRRLTPVQVLG------ 195
Query: 222 DEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV-VAL 280
L + ++ G HS A++ +G ++TWG G+ Q G +L+ R AL
Sbjct: 196 -----LTGVKDIAAGNVHSLALTADGRLWTWG-------GNVDGQLGTGDLVGRSTAAAL 243
Query: 281 DGIF-IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIP 339
G+ + ++ GG HS L G++++WG + AGQLGLG S++ + T +
Sbjct: 244 PGMTGVVALSGGGSHSLILKMDGSVWSWGKNDAGQLGLG------SVVSTPTPTQVPGLT 297
Query: 340 ILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVR 399
+V G G H++ DG + WG N+ Q + T P V + +V+
Sbjct: 298 EMVAVTG------GGQHSVALRVDGTVWAWGSNARAQLGDGTQTQRLSPCQVT-GLTQVK 350
Query: 400 KLAAGGGHSAV 410
+AAGGG +V
Sbjct: 351 GVAAGGGLHSV 361
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 121/416 (29%), Positives = 169/416 (40%), Gaps = 85/416 (20%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL----DIACGHEHTAAVA 78
++ WG N GQ G G +P +R L D++ G HT A+
Sbjct: 369 VWAWGSNSEGQVG-DGTYLMKLVPT-------------TARVLVERADVSAGGGHTLALK 414
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DGT + WG N QLGDGT R P +V L V ++S G + + A+ E DGT
Sbjct: 415 PDGTAWGWGLNAQSQLGDGTTTARPLPVQVLNLTR--VAAVSAGTYHSLALKE----DGT 468
Query: 139 ISTSRLWVWGQNQGSNFPRLFWGAFTPNT--------------IICQVSCGSVHVVALSE 184
+ W WG N +WGA T + V+ G+ H +ALS
Sbjct: 469 V-----WGWGAN--------YWGAIGDGTALNRSQPVKVSGTLVAMTVASGNFHSLALSV 515
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G + AWG N GQLG G P + P LE + ++ G HS A+
Sbjct: 516 DGSVWAWGDNSLGQLGDGTVTPTRNAPFRV----------PNLEGVVSLAAGGEHSLALK 565
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVAL-DGIFIKDVACGGVHSCALTSK 301
+G V+ W G+ C+ +L P +V L D + ++ C HS L +
Sbjct: 566 ADGTVWVW-----GRQDTCADPENVGRVLRVPEQVQGLTDAVAVRAGRC---HSVVLRAD 617
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
G L+AWG + GQL G T + + P D GV + G TL
Sbjct: 618 GTLWAWGRNAEGQLADG--TFTDRMTPARVDGL----------TGVISFSVGSEQTLALK 665
Query: 362 RDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSL 417
DG WG N+ GQ S P+ V + +VR +A G H+ VL D +L
Sbjct: 666 ADGTAWAWGPNAQGQLGGGLSVPRTRPTQVP-TLTDVRTVAMGAVHALVLKDDLTL 720
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/371 (29%), Positives = 160/371 (43%), Gaps = 54/371 (14%)
Query: 27 GYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTW 86
G N SGQ G P+ P + G S IA G H A+ +DG + +W
Sbjct: 773 GANASGQLGDG-----TLFPRAEPVPVIGL-----SECRAIAGGATHGLALKTDGRVLSW 822
Query: 87 GANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWV 146
GAN G+LGDGT R+ P V L V SI+ GA + A+ DG++
Sbjct: 823 GANAEGELGDGTTVARRAPAVVGPLAG--VLSIAVGARHSLALL----GDGSVQ-----A 871
Query: 147 WGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLG 200
WG N G+ R+ T + ++ G +AL G + AWG N GQLG
Sbjct: 872 WGSNIQGQLGDGTTVSRVLPVRVQGLTGVAAIAAGDGFSLALKHDGTVWAWGGNTLGQLG 931
Query: 201 RGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQL 260
T L R L +T V+ G HS A+ +G ++ WG + G+L
Sbjct: 932 DNTTLRSLVPVRT-----------QALTGVTAVAAGRNHSLALKGDGTLWAWGSNTYGEL 980
Query: 261 GHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQ 320
G + ++L P +V +L G+ D G HS A+TS G ++ WG +Q GQ+G G +
Sbjct: 981 GDGTQA---RKLAPVQVTSLTGVSALD--AGDHHSLAVTSGGKVWGWGRNQFGQVGKGVK 1035
Query: 321 TRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANE 380
+ ++ L+P + +P L VA G H+L + D + WG+ GQ
Sbjct: 1036 S-NWQLLPAQ-------VPGL---TSAVAVAGGGEHSLALLSDRSVWAWGHGDMGQLGTG 1084
Query: 381 KSTYAWYPSPV 391
S P V
Sbjct: 1085 MSNLRLSPVQV 1095
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 142/311 (45%), Gaps = 42/311 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+ WG N G+ G G R P + P L G L IA G H+ A+ DG+
Sbjct: 819 VLSWGANAEGELG-DGTTVARRAPAVVGP-LAGV--------LSIAVGARHSLALLGDGS 868
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ WG+N GQLGDGT R P +V+ L V +I+ G + A+ ++DGT+
Sbjct: 869 VQAWGSNIQGQLGDGTTVSRVLPVRVQGLTG--VAAIAAGDGFSLAL----KHDGTV--- 919
Query: 143 RLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
W WG N + L T + V+ G H +AL G L AWG N Y
Sbjct: 920 --WAWGGNTLGQLGDNTTLRSLVPVRTQALTGVTAVAAGRNHSLALKGDGTLWAWGSNTY 977
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
G+LG G L +V L ++ + G++HS AV+ G+V+ WG
Sbjct: 978 GELGDGTQARKLAPVQVT-----------SLTGVSALDAGDHHSLAVTSGGKVWGWGRNQ 1026
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
GQ+G ++S + +LLP +V L VA GG HS AL S +++AWG GQLG
Sbjct: 1027 FGQVGK-GVKS-NWQLLPAQVPGLTSAVA--VAGGGEHSLALLSDRSVWAWGHGDMGQLG 1082
Query: 317 LGPQTRSFSLI 327
G S +
Sbjct: 1083 TGMSNLRLSPV 1093
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 158/391 (40%), Gaps = 70/391 (17%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFT 85
WG N Q G + LP ++ +R ++ G H+ A+ DGT++
Sbjct: 422 WGLNAQSQLGDG-----TTTARPLPVQVLNL-----TRVAAVSAGTYHSLALKEDGTVWG 471
Query: 86 WGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLW 145
WGAN +G +GDGT R P KV + +++ G + A++ DG++ W
Sbjct: 472 WGANYWGAIGDGTALNRSQPVKVS--GTLVAMTVASGNFHSLALSV----DGSV-----W 520
Query: 146 VWGQNQGSNFPRLFWGAFTPNTI----------ICQVSCGSVHVVALSECGLLQAWGYNE 195
WG N + +L G TP + ++ G H +AL G + WG +
Sbjct: 521 AWGDN---SLGQLGDGTVTPTRNAPFRVPNLEGVVSLAAGGEHSLALKADGTVWVWGRQD 577
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
TC P + + ++ L V G HS + +G ++ WG
Sbjct: 578 --------TCA---DPENVGRVLRVPEQVQGLTDAVAVRAGRCHSVVLRADGTLWAWGRN 626
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
+ GQL + + P RV L G+ + G + AL + G +AWG + GQL
Sbjct: 627 AEGQLADGTFT---DRMTPARVDGLTGVI--SFSVGSEQTLALKADGTAWAWGPNAQGQL 681
Query: 316 GLG---PQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYN 372
G G P+TR + +P +D V+ VA G H LV D + WG N
Sbjct: 682 GGGLSVPRTRP-TQVPTLTD--------------VRTVAMGAVHALVLKDDLTLWAWGSN 726
Query: 373 SYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 403
+ GQ + W +PV + R LAA
Sbjct: 727 AEGQVGD--GALDWQAAPVRSGLAASRGLAA 755
>gi|432847192|ref|XP_004065976.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
latipes]
Length = 1049
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 104/329 (31%), Positives = 156/329 (47%), Gaps = 44/329 (13%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++Y G N GQ G PEL G A + ++CG H+ AV G
Sbjct: 53 SVYTCGSNSCGQLGHDKAGNS--------PELVG--ALDTQKITMVSCGRAHSVAVNEQG 102
Query: 82 TLFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGTI 139
+F WGA + GQLG + E + P +K+L + + CG HC A DG
Sbjct: 103 QVFVWGAGDGGQLGLETAETAVRIPRLLKKLCDHSISQVVCGNQHCIAL-----SRDG-- 155
Query: 140 STSRLWVWGQNQGSNFP--RLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQA 190
+L+ WGQN + +P+ + + Q++ G H ALS G +
Sbjct: 156 ---QLFTWGQNSSGQLGLGKGETSKLSPSPVKSLAGIPLAQITAGGDHCFALSLSGAVFG 212
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG N+ GQLG + R + + KFL +++ +SCG+ H+AA++++G ++
Sbjct: 213 WGKNKAGQLGLNDKQD-----RAVPCHIKFLRS----QRVVYISCGDEHTAALTKSGGLF 263
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYAWGG 309
T+G GS GQLGH S + ELLPRRV+ L G + + CG H+ A S G +YA+G
Sbjct: 264 TFGDGSRGQLGH---GSSNNELLPRRVMELMGTEVSQITCGRHHTLAFVPSSGTVYAFGC 320
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
+ GQLG G S P ++D N+
Sbjct: 321 NSHGQLGTGILADLRSPHPVKNDFLTLNL 349
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 152/349 (43%), Gaps = 48/349 (13%)
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
++ACG +HT + DG+++T G+N GQLG ++ PE V L ++ + +SCG
Sbjct: 37 EVACGGQHTLFLLQDGSVYTCGSNSCGQLGH--DKAGNSPELVGALDTQKITMVSCGRAH 94
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNF-----------PRLFWGAFTPNTIICQVSC 174
+ A+ E +++VWG G PRL + I QV C
Sbjct: 95 SVAVNE---------QGQVFVWGAGDGGQLGLETAETAVRIPRLLKKLCDHS--ISQVVC 143
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G+ H +ALS G L WG N GQLG G P +K A + Q++
Sbjct: 144 GNQHCIALSRDGQLFTWGQNSSGQLGLGKGETSKLSPSPVKSLAGI--------PLAQIT 195
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVH 294
G H A+S +G V+ WG GQLG L +P + L + ++CG H
Sbjct: 196 AGGDHCFALSLSGAVFGWGKNKAGQLG---LNDKQDRAVPCHIKFLRSQRVVYISCGDEH 252
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGH 354
+ ALT G L+ +G GQLG G L+P + ++ V + CG
Sbjct: 253 TAALTKSGGLFTFGDGSRGQLGHGSSNN--ELLPRRV--------MELMGTEVSQITCGR 302
Query: 355 SHTLVYM-RDGRIHGWGYNSYGQAANEKSTYAWYPSPV--DWCVGEVRK 400
HTL ++ G ++ +G NS+GQ P PV D+ +RK
Sbjct: 303 HHTLAFVPSSGTVYAFGCNSHGQLGTGILADLRSPHPVKNDFLTLNLRK 351
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 156/335 (46%), Gaps = 39/335 (11%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDGTIST 141
+ WG GQLG G E ++ + S +K ++CG T + + DG++ T
Sbjct: 1 MLCWGNARDGQLGIGVEGNPVFEPRICHVFSGRGLKEVACGGQHTLFLLQ----DGSVYT 56
Query: 142 ---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQ 198
+ G ++ N P L GA I VSCG H VA++E G + WG + GQ
Sbjct: 57 CGSNSCGQLGHDKAGNSPELV-GALDTQKI-TMVSCGRAHSVAVNEQGQVFVWGAGDGGQ 114
Query: 199 LGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVG 258
LG ++ PR++K K D + I+QV CG H A+S +G+++TWG S G
Sbjct: 115 LGLETAETAVRIPRLLK---KLCDHS-----ISQVVCGNQHCIALSRDGQLFTWGQNSSG 166
Query: 259 QLGHCSLQSGD-KELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
QLG L G+ +L P V +L GI + + GG H AL+ GA++ WG ++AGQLGL
Sbjct: 167 QLG---LGKGETSKLSPSPVKSLAGIPLAQITAGGDHCFALSLSGAVFGWGKNKAGQLGL 223
Query: 318 GPQTRSFSLIPNESDTYFRNIPI---LVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
+D R +P + V ++CG HT + G + +G S
Sbjct: 224 -------------NDKQDRAVPCHIKFLRSQRVVYISCGDEHTAALTKSGGLFTFGDGSR 270
Query: 375 GQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
GQ + S P V +G EV ++ G H+
Sbjct: 271 GQLGHGSSNNELLPRRVMELMGTEVSQITCGRHHT 305
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 117/247 (47%), Gaps = 27/247 (10%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
+V+CG H + L + G + G N GQLG + P ++ A + +KI
Sbjct: 37 EVACGGQHTLFLLQDGSVYTCGSNSCGQLGHD---KAGNSPELVG--------ALDTQKI 85
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
T VSCG HS AV+E G+V+ WG G GQLG + ++ + +PR + L I V C
Sbjct: 86 TMVSCGRAHSVAVNEQGQVFVWGAGDGGQLGLETAETAVR--IPRLLKKLCDHSISQVVC 143
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGP-QTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
G H AL+ G L+ WG + +GQLGLG +T S P +S IP+ Q+
Sbjct: 144 GNQHCIALSRDGQLFTWGQNSSGQLGLGKGETSKLSPSPVKS---LAGIPL------AQI 194
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQ-AANEKSTYAWYPSPVDWCVGE-VRKLAAGGGH 407
A G H G + GWG N GQ N+K A P + + + V ++ G H
Sbjct: 195 TAGG-DHCFALSLSGAVFGWGKNKAGQLGLNDKQDRA-VPCHIKFLRSQRVVYISCGDEH 252
Query: 408 SAVLADA 414
+A L +
Sbjct: 253 TAALTKS 259
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 108/227 (47%), Gaps = 30/227 (13%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG GQLG G+ + PR+ ++ + +V+CG H+ + ++G VY
Sbjct: 4 WGNARDGQLGIGVEGNPVFEPRICHVFSG--------RGLKEVACGGQHTLFLLQDGSVY 55
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
T G S GQLGH ++G+ P V ALD I V+CG HS A+ +G ++ WG
Sbjct: 56 TCGSNSCGQLGHD--KAGNS---PELVGALDTQKITMVSCGRAHSVAVNEQGQVFVWGAG 110
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPIL---VVPNGVQLVACGHSHTLVYMRDGRIH 367
GQLGL ++T R IP L + + + V CG+ H + RDG++
Sbjct: 111 DGGQLGL-----------ETAETAVR-IPRLLKKLCDHSISQVVCGNQHCIALSRDGQLF 158
Query: 368 GWGYNSYGQAANEK-STYAWYPSPVDWCVG-EVRKLAAGGGHSAVLA 412
WG NS GQ K T PSPV G + ++ AGG H L+
Sbjct: 159 TWGQNSSGQLGLGKGETSKLSPSPVKSLAGIPLAQITAGGDHCFALS 205
>gi|426232148|ref|XP_004010096.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Ovis aries]
Length = 992
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/243 (35%), Positives = 122/243 (50%), Gaps = 23/243 (9%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ VSCG H +A+ G + AWG GQLG G E P+ IK A
Sbjct: 49 VALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGELKETTFIPKKIKTLADI-------- 100
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
KI QV+CG YHS A+SE+G+V++WG S GQLG + + P+RV +L+GI + V
Sbjct: 101 KIIQVACGHYHSLALSEDGQVFSWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQV 158
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV---VPN 345
A GG HS AL+ G + WG + AGQL L R P+LV
Sbjct: 159 AAGGAHSFALSLSGTSFGWGSNNAGQLALSGNNAPVQ----------RYKPVLVGALKTL 208
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGG 405
V ++CG+ HT V +DG++ +G NSYGQ ++ + P V+ G V ++ G
Sbjct: 209 SVVFISCGYEHTAVLTQDGKVFTFGDNSYGQLGHDSTAEKRGPQLVERIEGLVSQIDCGS 268
Query: 406 GHS 408
H+
Sbjct: 269 YHT 271
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 139/307 (45%), Gaps = 52/307 (16%)
Query: 27 GYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTW 86
G N GQ GRKG P+ PE PA ++CG EH+ AV G +F W
Sbjct: 20 GDNSRGQLGRKG------TPRGEQPE--RIPALETLHVALVSCGKEHSLAVCHKGRVFAW 71
Query: 87 GANEFGQLGDG-TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLW 145
GA GQLG G +E P+K+K L + ++CG + + A++E DG + +
Sbjct: 72 GAASEGQLGIGELKETTFIPKKIKTLADIKIIQVACGHYHSLALSE----DGQV-----F 122
Query: 146 VWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWG 192
WG+N G FP +P + + QV+ G H ALS G WG
Sbjct: 123 SWGKNSHGQLGLGKEFP----SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWG 178
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
N GQL G P ++ Y L A + + +SCG H+A ++++G+V+T+
Sbjct: 179 SNNAGQLA----LSGNNAP--VQRYKPVLVGALKTLSVVFISCGYEHTAVLTQDGKVFTF 232
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G S GQLGH S ++ P+ V ++G+ + + CG H+ A Y + Q
Sbjct: 233 GDNSYGQLGH---DSTAEKRGPQLVERIEGL-VSQIDCGSYHTLA-------YVYTTGQV 281
Query: 313 GQLGLGP 319
G GP
Sbjct: 282 VSFGRGP 288
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 140/314 (44%), Gaps = 44/314 (14%)
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
G H+ + SDGT+ + G N GQLG GT G + PE++ L++ V +SCG + A
Sbjct: 3 GEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRG-EQPERIPALETLHVALVSCGKEHSLA 61
Query: 129 IAEPRENDGTISTSRLWVWGQNQGSNFP--RLFWGAFTPNTI-------ICQVSCGSVHV 179
+ R++ WG L F P I I QV+CG H
Sbjct: 62 VCH---------KGRVFAWGAASEGQLGIGELKETTFIPKKIKTLADIKIIQVACGHYHS 112
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
+ALSE G + +WG N +GQLG G P+ ++ L+ P + QV+ G H
Sbjct: 113 LALSEDGQVFSWGKNSHGQLGLGKEFPSQASPQRVRS----LEGIP----LAQVAAGGAH 164
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT 299
S A+S +G + WG + GQL + + P V AL + + ++CG H+ LT
Sbjct: 165 SFALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVLT 224
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLVACGHSHT 357
G ++ +G + GQLG T + P LV + V + CG HT
Sbjct: 225 QDGKVFTFGDNSYGQLG-------------HDSTAEKRGPQLVERIEGLVSQIDCGSYHT 271
Query: 358 LVYM-RDGRIHGWG 370
L Y+ G++ +G
Sbjct: 272 LAYVYTTGQVVSFG 285
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 118/250 (47%), Gaps = 41/250 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG GQ G + IPK++ A+ + + +ACGH H+ A++
Sbjct: 65 KGRVFAWGAASEGQLGIGELKETTFIPKKIK-------TLADIKIIQVACGHYHSLALSE 117
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG +F+WG N GQLG G E + P++V+ L+ + ++ G + A++ + G
Sbjct: 118 DGQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFG- 176
Query: 139 ISTSRLWVWGQNQ-------GSNFP-----RLFWGAFTPNTIICQVSCGSVHVVALSECG 186
WG N G+N P + GA +++ +SCG H L++ G
Sbjct: 177 --------WGSNNAGQLALSGNNAPVQRYKPVLVGALKTLSVVF-ISCGYEHTAVLTQDG 227
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G N YGQLG T E +GP++++ ++Q+ CG YH+ A V
Sbjct: 228 KVFTFGDNSYGQLGHDSTAEK-RGPQLVERIEGL---------VSQIDCGSYHTLAYVYT 277
Query: 246 NGEVYTWGLG 255
G+V ++G G
Sbjct: 278 TGQVVSFGRG 287
>gi|329928889|ref|ZP_08282703.1| regulator of chromosome condensation (RCC1) repeat protein
[Paenibacillus sp. HGF5]
gi|328937260|gb|EGG33685.1| regulator of chromosome condensation (RCC1) repeat protein
[Paenibacillus sp. HGF5]
Length = 719
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 110/355 (30%), Positives = 167/355 (47%), Gaps = 53/355 (14%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ G+ HTA++ S G +++WG + GQLGDGT R P K L V I G +
Sbjct: 38 LVAGYYHTASLVSSGEVYSWGYGDRGQLGDGTWNTRTTPVMAKNL--NHVIDIHSGVRSS 95
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-----ICQVSCG-S 176
A+ + DGT+ W WG N+ +L G T P + I +S G +
Sbjct: 96 MALRQ----DGTV-----WTWGANENG---QLGIGTITNVNAPAQVPGLSGIKAISGGLA 143
Query: 177 VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG 236
H +ALSE G + WG N+ G+LG G T + P ++ G L +T ++ G
Sbjct: 144 YHGMALSENGTVWTWGKNDNGELGNGTTTQ-QNSPVLVAG----------LSDVTAIAAG 192
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSC 296
Y+S A+ +G V+ WG+ G+LG + + +P +V L + +A GG HS
Sbjct: 193 GYYSLALKSDGTVWAWGVNGSGELGDGTTT---ERHVPVQVAGLTDVMA--IAAGGSHSL 247
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G ++AWG + G LG G TR+ P + RN+ +V VA G H
Sbjct: 248 AIRQDGTVWAWGNNTYGTLGDG--TRTHRTRPVQ----VRNLQHIVA------VAGGGYH 295
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
+L + G + WG NS Q + + P PV + VR+++AGG HS +
Sbjct: 296 SLAVDQAGNVWSWGDNSQQQLGLSSNASSLIPVPVT-GIEHVREISAGGFHSVAM 349
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/365 (30%), Positives = 166/365 (45%), Gaps = 64/365 (17%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WGY GQ G R + L + +DI G + A+ DGT
Sbjct: 54 VYSWGYGDRGQLGDG--TWNTRTTPVMAKNL--------NHVIDIHSGVRSSMALRQDGT 103
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGTIST 141
++TWGANE GQLG GT P +V L +K+IS G A+ A++E +GT+
Sbjct: 104 VWTWGANENGQLGIGTITNVNAPAQVPGLSG--IKAISGGLAYHGMALSE----NGTV-- 155
Query: 142 SRLWVWGQNQG----------SNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
W WG+N N P L G + + ++ G + +AL G + AW
Sbjct: 156 ---WTWGKNDNGELGNGTTTQQNSPVLVAGL----SDVTAIAAGGYYSLALKSDGTVWAW 208
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G N G+LG G T E P + G L + ++ G HS A+ ++G V+
Sbjct: 209 GVNGSGELGDGTTTE-RHVPVQVAG----------LTDVMAIAAGGSHSLAIRQDGTVWA 257
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG + G LG G + R V + I VA GG HS A+ G +++WG +
Sbjct: 258 WGNNTYGTLG-----DGTRTHRTRPVQVRNLQHIVAVAGGGYHSLAVDQAGNVWSWGDNS 312
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGY 371
QLGL + + SLIP +P+ + + V+ ++ G H++ +DG + GWGY
Sbjct: 313 QQQLGL--SSNASSLIP---------VPVTGIEH-VREISAGGFHSVAMKKDGTVWGWGY 360
Query: 372 NSYGQ 376
NS GQ
Sbjct: 361 NSGGQ 365
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 144/303 (47%), Gaps = 44/303 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHE-HTAAVASDG 81
++ WG N +GQ G G + P Q+P L G A I+ G H A++ +G
Sbjct: 104 VWTWGANENGQLG-IGTITNVNAPAQVPG-LSGIKA--------ISGGLAYHGMALSENG 153
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
T++TWG N+ G+LG+GT + P V L V +I+ G + + A+ ++DGT+
Sbjct: 154 TVWTWGKNDNGELGNGTTTQQNSPVLVAGLSD--VTAIAAGGYYSLAL----KSDGTV-- 205
Query: 142 SRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNE 195
W WG N G+ R T + ++ G H +A+ + G + AWG N
Sbjct: 206 ---WAWGVNGSGELGDGTTTERHVPVQVAGLTDVMAIAAGGSHSLAIRQDGTVWAWGNNT 262
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
YG LG G + +V L+ I V+ G YHS AV + G V++WG
Sbjct: 263 YGTLGDGTRTHRTRPVQV-----------RNLQHIVAVAGGGYHSLAVDQAGNVWSWGDN 311
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
S QLG L S L+P V ++ +++++ GG HS A+ G ++ WG + GQL
Sbjct: 312 SQQQLG---LSSNASSLIPVPVTGIE--HVREISAGGFHSVAMKKDGTVWGWGYNSGGQL 366
Query: 316 GLG 318
G G
Sbjct: 367 GDG 369
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 126/294 (42%), Gaps = 46/294 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N +G+ G +Q P L + + IA G ++ A+ SDGT
Sbjct: 155 VWTWGKNDNGELGNG------TTTQQNSPVLVAGLSDVTA----IAAGGYYSLALKSDGT 204
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG N G+LGDGT R P +V L V +I+ G + AI + DGT+
Sbjct: 205 VWAWGVNGSGELGDGTTTERHVPVQVAGLTD--VMAIAAGGSHSLAIRQ----DGTV--- 255
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTI---------ICQVSCGSVHVVALSECGLLQAWGY 193
W WG N + L G T T I V+ G H +A+ + G + +WG
Sbjct: 256 --WAWGNN---TYGTLGDGTRTHRTRPVQVRNLQHIVAVAGGGYHSLAVDQAGNVWSWGD 310
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
N QLG L P + G +E + ++S G +HS A+ ++G V+ WG
Sbjct: 311 NSQQQLGLSSNASSLI-PVPVTG----------IEHVREISAGGFHSVAMKKDGTVWGWG 359
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
S GQLG + + +P A+ D G ++ ++TS W
Sbjct: 360 YNSGGQLGDGTYN--NTRGIPTLTKAVLDTTSPDTGSGSLNPHSITSDSVALEW 411
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 89/192 (46%), Gaps = 27/192 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + ++ WG N SG+ G G + +P Q+ AG + IA G H+ A
Sbjct: 199 LKSDGTVWAWGVNGSGELG-DGTTTERHVPVQV--------AGLTDV-MAIAAGGSHSLA 248
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DGT++ WG N +G LGDGT R P +V+ LQ + +++ G + + A+ +
Sbjct: 249 IRQDGTVWAWGNNTYGTLGDGTRTHRTRPVQVRNLQ--HIVAVAGGGYHSLAVDQ----- 301
Query: 137 GTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
+W WG N SN L T + ++S G H VA+ + G +
Sbjct: 302 ----AGNVWSWGDNSQQQLGLSSNASSLIPVPVTGIEHVREISAGGFHSVAMKKDGTVWG 357
Query: 191 WGYNEYGQLGRG 202
WGYN GQLG G
Sbjct: 358 WGYNSGGQLGDG 369
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 112/252 (44%), Gaps = 32/252 (12%)
Query: 162 AFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFL 221
A + ++ G H +L G + +WGY + GQLG +G R AK
Sbjct: 28 ALAAAAVTPKLVAGYYHTASLVSSGEVYSWGYGDRGQLG-----DGTWNTRTTPVMAK-- 80
Query: 222 DEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD 281
L + + G S A+ ++G V+TWG GQLG ++ + + P +V L
Sbjct: 81 ----NLNHVIDIHSGVRSSMALRQDGTVWTWGANENGQLGIGTITNVNA---PAQVPGLS 133
Query: 282 GIFIKDVACG-GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI 340
GI K ++ G H AL+ G ++ WG + G+LG G T+ +N P+
Sbjct: 134 GI--KAISGGLAYHGMALSENGTVWTWGKNDNGELGNGTTTQ-------------QNSPV 178
Query: 341 LVVP-NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVR 399
LV + V +A G ++L DG + WG N G+ + +T P V + +V
Sbjct: 179 LVAGLSDVTAIAAGGYYSLALKSDGTVWAWGVNGSGELGDGTTTERHVPVQVA-GLTDVM 237
Query: 400 KLAAGGGHSAVL 411
+AAGG HS +
Sbjct: 238 AIAAGGSHSLAI 249
>gi|118396198|ref|XP_001030441.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila]
gi|89284744|gb|EAR82778.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila
SB210]
Length = 1984
Score = 131 bits (330), Expect = 7e-28, Method: Composition-based stats.
Identities = 91/302 (30%), Positives = 142/302 (47%), Gaps = 71/302 (23%)
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F+WG N GQ+G+ + +P++N +
Sbjct: 1500 GVMFSWGQNTEGQMGN--------------------------------VYDPKQN---LL 1524
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLG 200
+ ++ V NFP+L +TI+ V+CG H VA++ G + AWG N + QLG
Sbjct: 1525 SKKIKV-------NFPKLI--VPLKDTIVTSVACGYQHSVAITYAGTVLAWGDNSHSQLG 1575
Query: 201 RGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQL 260
G + P + F P L I VSCG H+ A+ G+V++WG G G L
Sbjct: 1576 LG-----EKSPSSVP----FPTPIPALTNIQSVSCGSEHTLALDYIGQVFSWGNGEGGLL 1626
Query: 261 GHCSLQSGDKELLP--RRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLG 318
GH G++++ P + + AL G+ + + CGG+HS LT +Y+WG ++ GQLG+
Sbjct: 1627 GH-----GNEDVCPSPKIIEALKGLNVDFIVCGGLHSLVLTKNRQVYSWGRNEGGQLGID 1681
Query: 319 PQTRSFSLIPNESDTYFRNIPILVVPN----GVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
+ L NE + P V N GV +A G +H+L +G+++GWGYN
Sbjct: 1682 KK-----LFTNEK--CYLTTPKRVKGNLEGVGVIQIAAGEAHSLALALNGQVYGWGYNMN 1734
Query: 375 GQ 376
GQ
Sbjct: 1735 GQ 1736
Score = 105 bits (263), Expect = 3e-20, Method: Composition-based stats.
Identities = 99/373 (26%), Positives = 158/373 (42%), Gaps = 62/373 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I + WG N Q G + P +P F P A + ++CG EHT A
Sbjct: 1557 ITYAGTVLAWGDNSHSQLGLGEKS-----PSSVP---FPTPIPALTNIQSVSCGSEHTLA 1608
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ G +F+WG E G LG G E+ P+ ++ L+ V I CG + + + R+
Sbjct: 1609 LDYIGQVFSWGNGEGGLLGHGNEDVCPSPKIIEALKGLNVDFIVCGGLHSLVLTKNRQ-- 1666
Query: 137 GTISTSRLWVWGQNQGSNF---PRLFWGA----FTPNTI--------ICQVSCGSVHVVA 181
++ WG+N+G +LF TP + + Q++ G H +A
Sbjct: 1667 -------VYSWGRNEGGQLGIDKKLFTNEKCYLTTPKRVKGNLEGVGVIQIAAGEAHSLA 1719
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEG--LQGPRVIKGYAKFLDEAPELEKITQV-SCGEY 238
L+ G + WGYN GQ+G G+ + + P++I P+L KI ++ CG
Sbjct: 1720 LALNGQVYGWGYNMNGQIGLGMQTDTYPVYEPQLI----------PKLNKIEKIFCCGLN 1769
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKEL----LPRRVVALDGIFIKDVACGGVH 294
S + E + L Q + + +P+++ I + V+CG H
Sbjct: 1770 DSNQLGLEKEPIKITSTTNNILDQYKPQDQKRAVTDVFIPKKMDCFHQIPVLHVSCGHNH 1829
Query: 295 SCAL----TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
S AL T L+AWG + GQLG+G +T S +P TY +++ +
Sbjct: 1830 SLALVVADTKHYMLFAWGMHKHGQLGIG-ETGQNSSVPRPI-TYLQDVTTYS-------M 1880
Query: 351 ACGHSHTLVYMRD 363
ACG H+LV D
Sbjct: 1881 ACGSYHSLVVAND 1893
Score = 105 bits (262), Expect = 4e-20, Method: Composition-based stats.
Identities = 111/429 (25%), Positives = 184/429 (42%), Gaps = 68/429 (15%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLP---PELFGCPAGANSRWLDIACGHEHTA 75
A ++ WG N GQ G +Q + K++ P+L P ++ +ACG++H+
Sbjct: 1498 AVGVMFSWGQNTEGQMGNVYDPKQNLLSKKIKVNFPKLI-VPL-KDTIVTSVACGYQHSV 1555
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
A+ GT+ WG N QLG G + P ++S+SCG+ T A+
Sbjct: 1556 AITYAGTVLAWGDNSHSQLGLGEKSPSSVPFPTPIPALTNIQSVSCGSEHTLALD----- 1610
Query: 136 DGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
+++ WG +G P++ N + CG +H + L++
Sbjct: 1611 ----YIGQVFSWGNGEGGLLGHGNEDVCPSPKIIEALKGLNVDF--IVCGGLHSLVLTKN 1664
Query: 186 GLLQAWGYNEYGQLG---RGITCEG--LQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
+ +WG NE GQLG + T E L P+ +KG E + Q++ GE HS
Sbjct: 1665 RQVYSWGRNEGGQLGIDKKLFTNEKCYLTTPKRVKGNL-------EGVGVIQIAAGEAHS 1717
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSG-----DKELLPRRVVALDGIFIKDVACGGVHS 295
A++ NG+VY WG GQ+G +Q+ + +L+P ++ ++ IF CG S
Sbjct: 1718 LALALNGQVYGWGYNMNGQIG-LGMQTDTYPVYEPQLIP-KLNKIEKIF----CCGLNDS 1771
Query: 296 CALTSKG---ALYAWGGSQAGQLGLGPQTRSFS--LIPNESDTYFRNIPILVVPNGVQLV 350
L + + + + Q Q R+ + IP + D F IP+L V
Sbjct: 1772 NQLGLEKEPIKITSTTNNILDQYKPQDQKRAVTDVFIPKKMDC-FHQIPVL-------HV 1823
Query: 351 ACGHSHTLVYMRDGRIH----GWGYNSYGQ-AANEKSTYAWYPSPVDWCVG-EVRKLAAG 404
+CGH+H+L + H WG + +GQ E + P P+ + +A G
Sbjct: 1824 SCGHNHSLALVVADTKHYMLFAWGMHKHGQLGIGETGQNSSVPRPITYLQDVTTYSMACG 1883
Query: 405 GGHSAVLAD 413
HS V+A+
Sbjct: 1884 SYHSLVVAN 1892
>gi|310824879|ref|YP_003957237.1| regulator of chromosome condensation [Stigmatella aurantiaca
DW4/3-1]
gi|309397951|gb|ADO75410.1| Regulator of chromosome condensation [Stigmatella aurantiaca
DW4/3-1]
Length = 775
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 135/423 (31%), Positives = 183/423 (43%), Gaps = 83/423 (19%)
Query: 51 PELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQ 110
P GA +R IA G H+ AV DGT++ G N FGQLGDGT R+ P +V+
Sbjct: 61 PSRASALGGARAR-ARIATGANHSWAVRPDGTVWAVGENVFGQLGDGTTSERRVPVQVQG 119
Query: 111 LQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQN--QGSN-----------FPR 157
L V +++ GA+ + A+ +DGT+ W G+ QG + P
Sbjct: 120 LSG--VVAVAVGAYHSLAL----RSDGTV-----WAVGRAACQGGDGTASDCTVPAPVPG 168
Query: 158 LFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGY 217
L G V+ G +H +AL G + AWG N GQLG G T L RV K
Sbjct: 169 LSGG--------VAVAAGGLHSLALRSDGTVWAWGSNFEGQLGDGTTNVSLVPVRVKK-- 218
Query: 218 AKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV 277
L + V+ GE HS AV +G V+TWG G LG + S +P +V
Sbjct: 219 ---------LTGVVAVAAGEKHSLAVRSDGTVWTWGFNGYGALGDGTTSS---RKVPVQV 266
Query: 278 VALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRN 337
L G VA G HS A+ S G ++ WG + GQLG G R L+P ++
Sbjct: 267 QGLSGGVA--VAGGVYHSLAVRSDGTVWGWGANGVGQLGDGTPMRRV-LVPVQAQGL--- 320
Query: 338 IPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEK-STYAWYPSPVDWCVG 396
+GV+ VA GHS +L DG + WG NSYG N+ T + P V G
Sbjct: 321 -------SGVEAVAAGHSLSLAVRFDGTVWAWGGNSYGALGNDTIETMSTVPVQVPGLSG 373
Query: 397 EVRKLAA----------------GGGHSAVLADACSLKELCEFRLAESVTLSNASEIEDV 440
V +AA GG H L D + + L +V + S + V
Sbjct: 374 GVTVVAASSHALAVRSDGTVWAWGGNHYGQLGDGTTSERLV------AVPVQGLSGVMAV 427
Query: 441 ASR 443
A+R
Sbjct: 428 AAR 430
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 176/378 (46%), Gaps = 62/378 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + + ++ WG N+ GQ G G R+ +P +P S + +A G H+ A
Sbjct: 437 VRSDATVWAWGRNYEGQLG-DGTTRRREVPVPVPKL---------SSVVAVAAGRYHSLA 486
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V DGT++ WG NE+GQ+GDGTE RK P +V L +++ G + + + +D
Sbjct: 487 VRFDGTVWAWGDNEYGQVGDGTETSRKAPVRVPNLGGGV--AVAAGENHSLVL----RSD 540
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQ---------VSCGSVHVVALSECGL 187
GT+ W WG G+++ +L G + + + Q V+ G + +A+ G
Sbjct: 541 GTV-----WAWG---GNHYGQLGNGITSDSPVPVQVQGLSGGVAVAAGQYYSLAVRSDGT 592
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWG N GQLG G + RV + P L V+ G H+ V +G
Sbjct: 593 VWAWGLNFEGQLGDGTASDSPVPVRV---------QVPGLSGGVAVAAGTSHALVVRSDG 643
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL-DGIFIKDVACGGVHSCALTSKGALYA 306
V+ WG GQ+G + + + L+P +V L +G+ VA G HS A+ S G+++A
Sbjct: 644 TVWAWGSNYDGQVGEGAPRR--RVLMPVQVQGLSEGMA---VAAGYNHSLAVRSDGSVWA 698
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGR 365
WGG+ AG LG G R R +P+ G + VA G SH+LV DG
Sbjct: 699 WGGNTAGVLGDGTTDR-------------RTVPVQAQGLTGARAVAAGESHSLVLRSDGT 745
Query: 366 IHGWGYNSYGQAANEKST 383
G N+ GQ + T
Sbjct: 746 GWAMGSNASGQIGDGGPT 763
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 121/392 (30%), Positives = 173/392 (44%), Gaps = 77/392 (19%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + ++ WG+N G G G ++P Q+ G G + +A G H+ A
Sbjct: 235 VRSDGTVWTWGFNGYGALG-DGTTSSRKVPVQVQ----GLSGG-----VAVAGGVYHSLA 284
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V SDGT++ WGAN GQLGDGT R+ V+ V++++ G + A+ D
Sbjct: 285 VRSDGTVWGWGANGVGQLGDGTPM-RRVLVPVQAQGLSGVEAVAAGHSLSLAV----RFD 339
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAF------TPNTIICQVS---------CGSVHVVA 181
GT+ W WG N +GA T +T+ QV S H +A
Sbjct: 340 GTV-----WAWGGNS--------YGALGNDTIETMSTVPVQVPGLSGGVTVVAASSHALA 386
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
+ G + AWG N YGQLG G T E L V L + V+ + HS
Sbjct: 387 VRSDGTVWAWGGNHYGQLGDGTTSERLVAVPV-----------QGLSGVMAVAARQEHSL 435
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
AV + V+ WG GQLG + + + +P V L + VA G HS A+
Sbjct: 436 AVRSDATVWAWGRNYEGQLGDGTTR---RREVPVPVPKLSSVVA--VAAGRYHSLAVRFD 490
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN--GVQLVACGHSHTLV 359
G ++AWG ++ GQ+G G +T R P+ V PN G VA G +H+LV
Sbjct: 491 GTVWAWGDNEYGQVGDGTETS-------------RKAPVRV-PNLGGGVAVAAGENHSLV 536
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
DG + WG N YGQ N ++ + P PV
Sbjct: 537 LRSDGTVWAWGGNHYGQLGNGITSDS--PVPV 566
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 121/434 (27%), Positives = 175/434 (40%), Gaps = 85/434 (19%)
Query: 25 VWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
VW + G G +P +P G G + +A G H+ A+ SDGT++
Sbjct: 142 VWAVGRAACQGGDGTASDCTVPAPVP----GLSGG-----VAVAAGGLHSLALRSDGTVW 192
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRL 144
WG+N GQLGDGT P +VK+L V +++ G + A+ +DGT+
Sbjct: 193 AWGSNFEGQLGDGTTNVSLVPVRVKKLTG--VVAVAAGEKHSLAV----RSDGTV----- 241
Query: 145 WVWGQNQGSNFPRLFWGAFTPNTIICQ---------VSCGSVHVVALSECGLLQAWGYNE 195
W WG N + L G + + Q V+ G H +A+ G + WG N
Sbjct: 242 WTWGFN---GYGALGDGTTSSRKVPVQVQGLSGGVAVAGGVYHSLAVRSDGTVWGWGANG 298
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
GQLG G + P +A L + V+ G S AV +G V+ WG
Sbjct: 299 VGQLGDGTPMRRVLVPV----------QAQGLSGVEAVAAGHSLSLAVRFDGTVWAWGGN 348
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
S G LG+ ++++ +P +V L G V H+ A+ S G ++AWGG+ GQL
Sbjct: 349 SYGALGNDTIET--MSTVPVQVPGLSGGVT--VVAASSHALAVRSDGTVWAWGGNHYGQL 404
Query: 316 GLGPQTRSFSLIP-------------------------------------NESDTYFRNI 338
G G + +P + T R +
Sbjct: 405 GDGTTSERLVAVPVQGLSGVMAVAARQEHSLAVRSDATVWAWGRNYEGQLGDGTTRRREV 464
Query: 339 PILVVP-NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE 397
P+ V + V VA G H+L DG + WG N YGQ + T P V G
Sbjct: 465 PVPVPKLSSVVAVAAGRYHSLAVRFDGTVWAWGDNEYGQVGDGTETSRKAPVRVPNLGGG 524
Query: 398 VRKLAAGGGHSAVL 411
V +AAG HS VL
Sbjct: 525 V-AVAAGENHSLVL 537
>gi|115374764|ref|ZP_01462040.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|115368241|gb|EAU67200.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 750
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 135/423 (31%), Positives = 183/423 (43%), Gaps = 83/423 (19%)
Query: 51 PELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQ 110
P GA +R IA G H+ AV DGT++ G N FGQLGDGT R+ P +V+
Sbjct: 36 PSRASALGGARAR-ARIATGANHSWAVRPDGTVWAVGENVFGQLGDGTTSERRVPVQVQG 94
Query: 111 LQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQN--QGSN-----------FPR 157
L V +++ GA+ + A+ +DGT+ W G+ QG + P
Sbjct: 95 LSG--VVAVAVGAYHSLAL----RSDGTV-----WAVGRAACQGGDGTASDCTVPAPVPG 143
Query: 158 LFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGY 217
L G V+ G +H +AL G + AWG N GQLG G T L RV K
Sbjct: 144 LSGG--------VAVAAGGLHSLALRSDGTVWAWGSNFEGQLGDGTTNVSLVPVRVKK-- 193
Query: 218 AKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV 277
L + V+ GE HS AV +G V+TWG G LG + S +P +V
Sbjct: 194 ---------LTGVVAVAAGEKHSLAVRSDGTVWTWGFNGYGALGDGTTSS---RKVPVQV 241
Query: 278 VALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRN 337
L G VA G HS A+ S G ++ WG + GQLG G R L+P ++
Sbjct: 242 QGLSGGVA--VAGGVYHSLAVRSDGTVWGWGANGVGQLGDGTPMRRV-LVPVQAQGL--- 295
Query: 338 IPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEK-STYAWYPSPVDWCVG 396
+GV+ VA GHS +L DG + WG NSYG N+ T + P V G
Sbjct: 296 -------SGVEAVAAGHSLSLAVRFDGTVWAWGGNSYGALGNDTIETMSTVPVQVPGLSG 348
Query: 397 EVRKLAA----------------GGGHSAVLADACSLKELCEFRLAESVTLSNASEIEDV 440
V +AA GG H L D + + L +V + S + V
Sbjct: 349 GVTVVAASSHALAVRSDGTVWAWGGNHYGQLGDGTTSERLV------AVPVQGLSGVMAV 402
Query: 441 ASR 443
A+R
Sbjct: 403 AAR 405
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 176/378 (46%), Gaps = 62/378 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + + ++ WG N+ GQ G G R+ +P +P S + +A G H+ A
Sbjct: 412 VRSDATVWAWGRNYEGQLG-DGTTRRREVPVPVPKL---------SSVVAVAAGRYHSLA 461
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V DGT++ WG NE+GQ+GDGTE RK P +V L +++ G + + + +D
Sbjct: 462 VRFDGTVWAWGDNEYGQVGDGTETSRKAPVRVPNLGGGV--AVAAGENHSLVL----RSD 515
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQ---------VSCGSVHVVALSECGL 187
GT+ W WG G+++ +L G + + + Q V+ G + +A+ G
Sbjct: 516 GTV-----WAWG---GNHYGQLGNGITSDSPVPVQVQGLSGGVAVAAGQYYSLAVRSDGT 567
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWG N GQLG G + RV + P L V+ G H+ V +G
Sbjct: 568 VWAWGLNFEGQLGDGTASDSPVPVRV---------QVPGLSGGVAVAAGTSHALVVRSDG 618
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL-DGIFIKDVACGGVHSCALTSKGALYA 306
V+ WG GQ+G + + + L+P +V L +G+ VA G HS A+ S G+++A
Sbjct: 619 TVWAWGSNYDGQVGEGAPRR--RVLMPVQVQGLSEGMA---VAAGYNHSLAVRSDGSVWA 673
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGR 365
WGG+ AG LG G R R +P+ G + VA G SH+LV DG
Sbjct: 674 WGGNTAGVLGDGTTDR-------------RTVPVQAQGLTGARAVAAGESHSLVLRSDGT 720
Query: 366 IHGWGYNSYGQAANEKST 383
G N+ GQ + T
Sbjct: 721 GWAMGSNASGQIGDGGPT 738
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 121/392 (30%), Positives = 173/392 (44%), Gaps = 77/392 (19%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + ++ WG+N G G G ++P Q+ G G + +A G H+ A
Sbjct: 210 VRSDGTVWTWGFNGYGALG-DGTTSSRKVPVQVQ----GLSGG-----VAVAGGVYHSLA 259
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V SDGT++ WGAN GQLGDGT R+ V+ V++++ G + A+ D
Sbjct: 260 VRSDGTVWGWGANGVGQLGDGTPM-RRVLVPVQAQGLSGVEAVAAGHSLSLAV----RFD 314
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAF------TPNTIICQVS---------CGSVHVVA 181
GT+ W WG N +GA T +T+ QV S H +A
Sbjct: 315 GTV-----WAWGGNS--------YGALGNDTIETMSTVPVQVPGLSGGVTVVAASSHALA 361
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
+ G + AWG N YGQLG G T E L V L + V+ + HS
Sbjct: 362 VRSDGTVWAWGGNHYGQLGDGTTSERLVAVPV-----------QGLSGVMAVAARQEHSL 410
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
AV + V+ WG GQLG + + + +P V L + VA G HS A+
Sbjct: 411 AVRSDATVWAWGRNYEGQLGDGTTR---RREVPVPVPKLSSVVA--VAAGRYHSLAVRFD 465
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN--GVQLVACGHSHTLV 359
G ++AWG ++ GQ+G G +T R P+ V PN G VA G +H+LV
Sbjct: 466 GTVWAWGDNEYGQVGDGTETS-------------RKAPVRV-PNLGGGVAVAAGENHSLV 511
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
DG + WG N YGQ N ++ + P PV
Sbjct: 512 LRSDGTVWAWGGNHYGQLGNGITSDS--PVPV 541
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 121/434 (27%), Positives = 175/434 (40%), Gaps = 85/434 (19%)
Query: 25 VWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
VW + G G +P +P G G + +A G H+ A+ SDGT++
Sbjct: 117 VWAVGRAACQGGDGTASDCTVPAPVP----GLSGG-----VAVAAGGLHSLALRSDGTVW 167
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRL 144
WG+N GQLGDGT P +VK+L V +++ G + A+ +DGT+
Sbjct: 168 AWGSNFEGQLGDGTTNVSLVPVRVKKLTG--VVAVAAGEKHSLAV----RSDGTV----- 216
Query: 145 WVWGQNQGSNFPRLFWGAFTPNTIICQ---------VSCGSVHVVALSECGLLQAWGYNE 195
W WG N + L G + + Q V+ G H +A+ G + WG N
Sbjct: 217 WTWGFN---GYGALGDGTTSSRKVPVQVQGLSGGVAVAGGVYHSLAVRSDGTVWGWGANG 273
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
GQLG G + P +A L + V+ G S AV +G V+ WG
Sbjct: 274 VGQLGDGTPMRRVLVPV----------QAQGLSGVEAVAAGHSLSLAVRFDGTVWAWGGN 323
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
S G LG+ ++++ +P +V L G V H+ A+ S G ++AWGG+ GQL
Sbjct: 324 SYGALGNDTIET--MSTVPVQVPGLSGGVT--VVAASSHALAVRSDGTVWAWGGNHYGQL 379
Query: 316 GLGPQTRSFSLIP-------------------------------------NESDTYFRNI 338
G G + +P + T R +
Sbjct: 380 GDGTTSERLVAVPVQGLSGVMAVAARQEHSLAVRSDATVWAWGRNYEGQLGDGTTRRREV 439
Query: 339 PILVVP-NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE 397
P+ V + V VA G H+L DG + WG N YGQ + T P V G
Sbjct: 440 PVPVPKLSSVVAVAAGRYHSLAVRFDGTVWAWGDNEYGQVGDGTETSRKAPVRVPNLGGG 499
Query: 398 VRKLAAGGGHSAVL 411
V +AAG HS VL
Sbjct: 500 V-AVAAGENHSLVL 512
>gi|307686853|ref|ZP_07629299.1| regulator of chromosome condensation RCC1 [Clostridium
cellulovorans 743B]
Length = 671
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 151/325 (46%), Gaps = 47/325 (14%)
Query: 62 SRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC 121
S ++ ++ G+ T A+ +DGT+++WG N+ G LGDGT P +VK L + +IS
Sbjct: 35 SGYIAVSAGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNSPVQVKGLNG--ITAISA 92
Query: 122 G-AHCTAAIAEPRENDGTISTSRLWVWG------QNQGSNFPRLFWGAFTPNTIICQVSC 174
G AH A ++DGT+ W WG G+N R T I +S
Sbjct: 93 GWAHFVA-----LKSDGTV-----WTWGVGYSGELGDGTNSLRTTPAPINGLTGITAISA 142
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G H +AL G L +WG N+YGQLG G T + + P IT +S
Sbjct: 143 GWNHTLALKADGTLWSWGQNQYGQLGTGNTTN-----------SNIPLQVPGQIGITSIS 191
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVH 294
G HS + +G V++WG + GQLG+ + P ++ L+GI +V+ G +H
Sbjct: 192 SGGGHSLVIKNDGTVWSWGCNNFGQLGNG---TNSNNPTPHQISGLNGII--NVSAGVIH 246
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGH 354
S AL S G ++ WG + G+L G + S+ IP +++ NG+ + G
Sbjct: 247 STALKSDGTVWNWGCNFRGELANGNKIDSY--IPVQANGL----------NGIIAITAGW 294
Query: 355 SHTLVYMRDGRIHGWGYNSYGQAAN 379
+ DG WG N YGQ N
Sbjct: 295 EFSSAIKSDGTFWVWGVNDYGQLGN 319
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 113/367 (30%), Positives = 162/367 (44%), Gaps = 67/367 (18%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++ WG+N +G G G P Q+ L G A I+ G H A+ SDG
Sbjct: 55 TVWSWGFNQNGHLG-DGTTSNSNSPVQVK-GLNGITA--------ISAGWAHFVALKSDG 104
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
T++TWG G+LGDGT R P + L + +IS G + T A+ + DGT
Sbjct: 105 TVWTWGVGYSGELGDGTNSLRTTPAPINGLTG--ITAISAGWNHTLAL----KADGT--- 155
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPNTI---------ICQVSCGSVHVVALSECGLLQAWG 192
LW WGQNQ + +L G T + I I +S G H + + G + +WG
Sbjct: 156 --LWSWGQNQ---YGQLGTGNTTNSNIPLQVPGQIGITSISSGGGHSLVIKNDGTVWSWG 210
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
N +GQLG G T P I G L I VS G HS A+ +G V+ W
Sbjct: 211 CNNFGQLGNG-TNSNNPTPHQISG----------LNGIINVSAGVIHSTALKSDGTVWNW 259
Query: 253 GLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
G G+L + G+K +P + L+GI + G S A+ S G + WG +
Sbjct: 260 GCNFRGELAN-----GNKIDSYIPVQANGLNGIIA--ITAGWEFSSAIKSDGTFWVWGVN 312
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGW 369
GQLG G ++ S P+ V +G+ + G ++T+ DG I +
Sbjct: 313 DYGQLGNGSKSDVTS-------------PMQVSSLSGITAIDTGATYTVALKTDGNIFAF 359
Query: 370 GYNSYGQ 376
G N+YGQ
Sbjct: 360 GENTYGQ 366
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/256 (32%), Positives = 119/256 (46%), Gaps = 34/256 (13%)
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
VS G+ +AL G + +WG+N+ G LG G T P +KG L IT
Sbjct: 40 VSAGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNS-NSPVQVKG----------LNGIT 88
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
+S G H A+ +G V+TWG+G G+LG + P + L GI ++ G
Sbjct: 89 AISAGWAHFVALKSDGTVWTWGVGYSGELGDGT---NSLRTTPAPINGLTGI--TAISAG 143
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN--GVQL 349
H+ AL + G L++WG +Q GQLG G T S NIP L VP G+
Sbjct: 144 WNHTLALKADGTLWSWGQNQYGQLGTGNTTNS-------------NIP-LQVPGQIGITS 189
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
++ G H+LV DG + WG N++GQ N ++ P + G + ++AG HS
Sbjct: 190 ISSGGGHSLVIKNDGTVWSWGCNNFGQLGNGTNSNNPTPHQISGLNG-IINVSAGVIHST 248
Query: 410 VL-ADACSLKELCEFR 424
L +D C FR
Sbjct: 249 ALKSDGTVWNWGCNFR 264
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 137/309 (44%), Gaps = 51/309 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + ++ WG +SG+ G LR L G A I+ G HT A
Sbjct: 100 LKSDGTVWTWGVGYSGELGDG--TNSLRTTPAPINGLTGITA--------ISAGWNHTLA 149
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAHCTAAIAEPREN 135
+ +DGTL++WG N++GQLG G P +V Q+ + SIS G + I +N
Sbjct: 150 LKADGTLWSWGQNQYGQLGTGNTTNSNIPLQVPGQIG---ITSISSGGGHSLVI----KN 202
Query: 136 DGTISTSRLWVWGQNQGSNFPRLFWGAF----TPNTI-----ICQVSCGSVHVVALSECG 186
DGT+ W WG N NF +L G TP+ I I VS G +H AL G
Sbjct: 203 DGTV-----WSWGCN---NFGQLGNGTNSNNPTPHQISGLNGIINVSAGVIHSTALKSDG 254
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ WG N G+L G I Y +A L I ++ G S+A+ +
Sbjct: 255 TVWNWGCNFRGELANG---------NKIDSYIPV--QANGLNGIIAITAGWEFSSAIKSD 303
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
G + WG+ GQLG+ S P +V +L GI D G ++ AL + G ++A
Sbjct: 304 GTFWVWGVNDYGQLGNGSKSDVTS---PMQVSSLSGITAID--TGATYTVALKTDGNIFA 358
Query: 307 WGGSQAGQL 315
+G + GQL
Sbjct: 359 FGENTYGQL 367
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 137/322 (42%), Gaps = 52/322 (16%)
Query: 104 HPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQG----------S 153
H +KV S ++ ++S G T A+ +NDGT+ W WG NQ S
Sbjct: 26 HSQKVVAGTSGYI-AVSAGNTTTIAL----KNDGTV-----WSWGFNQNGHLGDGTTSNS 75
Query: 154 NFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV 213
N P G I +S G H VAL G + WG G+LG G T P
Sbjct: 76 NSPVQVKGL----NGITAISAGWAHFVALKSDGTVWTWGVGYSGELGDG-TNSLRTTPAP 130
Query: 214 IKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL 273
I G L IT +S G H+ A+ +G +++WG GQLG + + + +
Sbjct: 131 ING----------LTGITAISAGWNHTLALKADGTLWSWGQNQYGQLGTGNTTNSN---I 177
Query: 274 PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDT 333
P +V GI ++ GG HS + + G +++WG + GQLG G T S + P++
Sbjct: 178 PLQVPGQIGI--TSISSGGGHSLVIKNDGTVWSWGCNNFGQLGNG--TNSNNPTPHQ--- 230
Query: 334 YFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDW 393
+ NG+ V+ G H+ DG + WG N G+ AN ++ P +
Sbjct: 231 -------ISGLNGIINVSAGVIHSTALKSDGTVWNWGCNFRGELANGNKIDSYIPVQANG 283
Query: 394 CVGEVRKLAAGGGHSAVLADAC 415
G + A SA+ +D
Sbjct: 284 LNGIIAITAGWEFSSAIKSDGT 305
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 10/93 (10%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I + +VWG N GQ G G + + P Q+ L G A I G +T A
Sbjct: 300 IKSDGTFWVWGVNDYGQLGN-GSKSDVTSPMQVS-SLSGITA--------IDTGATYTVA 349
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK 109
+ +DG +F +G N +GQLG+GT G PE V
Sbjct: 350 LKTDGNIFAFGENTYGQLGNGTTTGSTTPELVS 382
>gi|449481449|ref|XP_004156186.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Cucumis sativus]
Length = 390
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 112/376 (29%), Positives = 162/376 (43%), Gaps = 76/376 (20%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I ++ WG+N G G + +P Q+ A +N + + A G H A
Sbjct: 53 ITEDGKLFTWGWNQRGTLGHPAGTKSENVPSQVK-------ALSNVKIVQAAIGGWHCLA 105
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA-IAEPREN 135
V G + WG NE+GQ G+ PEK + I+ C I
Sbjct: 106 VDDQGRAYAWGGNEYGQCGE-------EPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAA 158
Query: 136 DGTIST-----SRLWVWGQN---------------QGSNFPRLFWGAFTPNTIICQVSCG 175
GT S +W WGQ QG + RL ++ G
Sbjct: 159 GGTHSVVLTREGHVWTWGQPWPPGDITQISVPVRVQGLDMVRL-------------IAVG 205
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
+ H +AL E G L AWG NEYGQLG G T Q P ++G + + ++
Sbjct: 206 AFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQ-PIPVQGLSGL--------TLVDIAA 256
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
G +HS A+++NGEVY WG G G+LG K ++P++V L G I ++CGG HS
Sbjct: 257 GGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSK-MVPQKVQLLSGEEIVQISCGGTHS 315
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP------NG--- 346
A+TS G ++++G G+LG G + + P E +PI + P NG
Sbjct: 316 VAVTSDGRMFSFGRGDHGRLGYGRKVTTGQ--PEE-------VPIDIPPPRGRTENGHWI 366
Query: 347 VQLVACGHSHTLVYMR 362
+LVACG HTL ++
Sbjct: 367 AKLVACGGRHTLALVQ 382
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 113/360 (31%), Positives = 164/360 (45%), Gaps = 62/360 (17%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+A+ + WG+ E GQLG G E R+ +K L+S+ V S+ G+ + AI E D
Sbjct: 1 MAAGTAIIAWGSGEDGQLGLGNNEEREWVCAIKALESQNVCSVVAGSRNSLAITE----D 56
Query: 137 GTISTSRLWVWGQNQ-----------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
G +L+ WG NQ N P N I Q + G H +A+ +
Sbjct: 57 G-----KLFTWGWNQRGTLGHPAGTKSENVPSQV--KALSNVKIVQAAIGGWHCLAVDDQ 109
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G AWG NEYGQ G + G + A AP+L + QV+ G HS ++
Sbjct: 110 GRAYAWGGNEYGQCGEEPEKKDNTGRPPRRDIAIPQRCAPKL-IVRQVAAGGTHSVVLTR 168
Query: 246 NGEVYTWGL----GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
G V+TWG G + Q+ +P RV LD ++ +A G H+ AL
Sbjct: 169 EGHVWTWGQPWPPGDITQIS-----------VPVRVQGLD--MVRLIAVGAFHNLALQED 215
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLV--ACGHSHTL 358
G L+AWG ++ GQLG G DT R+ PI V +G+ LV A G H+
Sbjct: 216 GTLWAWGNNEYGQLGTG-------------DTQPRSQPIPVQGLSGLTLVDIAAGGWHST 262
Query: 359 VYMRDGRIHGWGYNSYGQAA---NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
+G ++GWG +G+ N+KS+ P V G E+ +++ GG HS AV +D
Sbjct: 263 ALTDNGEVYGWGRGEHGRLGFGDNDKSSKM-VPQKVQLLSGEEIVQISCGGTHSVAVTSD 321
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 16/124 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G ++ ++ Q L G + I+CG H+ AV SDG
Sbjct: 270 VYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSG------EEIVQISCGGTHSVAVTSDGR 323
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKV------KQLQSE----FVKSISCGAHCTAAIAEP 132
+F++G + G+LG G + PE+V + ++E K ++CG T A+ +
Sbjct: 324 MFSFGRGDHGRLGYGRKVTTGQPEEVPIDIPPPRGRTENGHWIAKLVACGGRHTLALVQW 383
Query: 133 REND 136
+ D
Sbjct: 384 KPED 387
>gi|449447492|ref|XP_004141502.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Cucumis sativus]
Length = 390
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 112/376 (29%), Positives = 162/376 (43%), Gaps = 76/376 (20%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I ++ WG+N G G + +P Q+ A +N + + A G H A
Sbjct: 53 ITEDGKLFTWGWNQRGTLGHPAGTKSENVPSQVK-------ALSNVKIVQAAIGGWHCLA 105
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA-IAEPREN 135
V G + WG NE+GQ G+ PEK + I+ C I
Sbjct: 106 VDDQGRAYAWGGNEYGQCGE-------EPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAA 158
Query: 136 DGTIST-----SRLWVWGQN---------------QGSNFPRLFWGAFTPNTIICQVSCG 175
GT S +W WGQ QG + RL ++ G
Sbjct: 159 GGTHSVVLTREGHVWTWGQPWPPGDITQISVPVRVQGLDMVRL-------------IAVG 205
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
+ H +AL E G L AWG NEYGQLG G T Q P ++G + + ++
Sbjct: 206 AFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQ-PIPVQGLSGL--------TLVDIAA 256
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
G +HS A+++NGEVY WG G G+LG K ++P++V L G I ++CGG HS
Sbjct: 257 GGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSK-MVPQKVQLLSGEEIVQISCGGTHS 315
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP------NG--- 346
A+TS G ++++G G+LG G + + P E +PI + P NG
Sbjct: 316 VAVTSDGRMFSFGRGDHGRLGYGRKVTTGQ--PEE-------VPIDIPPPRGRTENGHWI 366
Query: 347 VQLVACGHSHTLVYMR 362
+LVACG HTL ++
Sbjct: 367 AKLVACGGRHTLALVQ 382
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 113/360 (31%), Positives = 164/360 (45%), Gaps = 62/360 (17%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+A+ + WG+ E GQLG G E R+ +K L+S+ V S+ G+ + AI E D
Sbjct: 1 MAAGTAIIAWGSGEDGQLGLGNNEEREWVCAIKALESQNVCSVVAGSRNSLAITE----D 56
Query: 137 GTISTSRLWVWGQNQ-----------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
G +L+ WG NQ N P N I Q + G H +A+ +
Sbjct: 57 G-----KLFTWGWNQRGTLGHPAGTKSENVPSQV--KALSNVKIVQAAIGGWHCLAVDDQ 109
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G AWG NEYGQ G + G + A AP+L + QV+ G HS ++
Sbjct: 110 GRAYAWGGNEYGQCGEEPEKKDNTGRPPRRDIAIPQRCAPKL-IVRQVAAGGTHSVVLTR 168
Query: 246 NGEVYTWGL----GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
G V+TWG G + Q+ +P RV LD ++ +A G H+ AL
Sbjct: 169 EGHVWTWGQPWPPGDITQIS-----------VPVRVQGLD--MVRLIAVGAFHNLALQED 215
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLV--ACGHSHTL 358
G L+AWG ++ GQLG G DT R+ PI V +G+ LV A G H+
Sbjct: 216 GTLWAWGNNEYGQLGTG-------------DTQPRSQPIPVQGLSGLTLVDIAAGGWHST 262
Query: 359 VYMRDGRIHGWGYNSYGQAA---NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
+G ++GWG +G+ N+KS+ P V G E+ +++ GG HS AV +D
Sbjct: 263 ALTDNGEVYGWGRGEHGRLGFGDNDKSSKM-VPQKVQLLSGEEIVQISCGGTHSVAVTSD 321
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 16/124 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G ++ ++ Q L G + I+CG H+ AV SDG
Sbjct: 270 VYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSG------EEIVQISCGGTHSVAVTSDGR 323
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKV------KQLQSE----FVKSISCGAHCTAAIAEP 132
+F++G + G+LG G + PE+V + ++E K ++CG T A+ +
Sbjct: 324 MFSFGRGDHGRLGYGRKVTTGQPEEVPIDIPPPRGRTENGHWIAKLVACGGRHTLALVQW 383
Query: 133 REND 136
+ D
Sbjct: 384 KSED 387
>gi|327268361|ref|XP_003218966.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
[Anolis carolinensis]
Length = 788
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 111/357 (31%), Positives = 173/357 (48%), Gaps = 30/357 (8%)
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
N + L I+CG EHT+ V +G L+ +G+N +GQLG G++ P VK L+ E VK +
Sbjct: 34 NDKPLHISCGDEHTSVVTENGKLYMFGSNNWGQLGFGSKNAVNKPTCVKALKPEKVKLAA 93
Query: 121 CGAHCTAAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVH 178
CG + T E G S +L + + S F + + FT I Q++ GS
Sbjct: 94 CGRNHTLICTEQGNVYAAGGNSEGQLGLGDTEERSTFHLISF--FTKQHKIKQLAAGSYT 151
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
L+E G L WG N GQ+G G K Y + + ++ +SCG Y
Sbjct: 152 SAVLTEDGQLVMWGDNSEGQIGLG-----------DKAYVSVPHQVDIGKPVSCISCGYY 200
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
HSA ++++GE+YT+G G+LG Q + + LP+ V + G K VACGG H+ L
Sbjct: 201 HSALITQDGELYTFGEPENGKLGLSPKQLKNHK-LPQLVSGISGKVSK-VACGGGHTVVL 258
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 358
++G +Y +G Q GQLG G +F +E T + + + +ACG +HT
Sbjct: 259 -AEGDVYTFGLGQYGQLGHG----TFVFETSEPKTVDH-----LGKHKICHIACGENHTA 308
Query: 359 VYMRDGRIHGWGYNSYGQ--AANEKSTYAWYPSP-VDWCVGEVRKLAAGGGHSAVLA 412
+ +G ++ +G +G+ E T + P+ ++ V +A GG H V A
Sbjct: 309 LITENGLMYTFGDGRHGKLGLGEENYTNQFVPTLCSNFLRFIVHSVACGGCHMLVFA 365
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 122/267 (45%), Gaps = 38/267 (14%)
Query: 154 NFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV 213
N P FW N +SCG H ++E G L +G N +GQLG G + + P
Sbjct: 25 NVPSKFW---FKNDKPLHISCGDEHTSVVTENGKLYMFGSNNWGQLGFG-SKNAVNKPTC 80
Query: 214 IKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL 273
+K A + EK+ +CG H+ +E G VY G S GQLG GD E
Sbjct: 81 VK--------ALKPEKVKLAACGRNHTLICTEQGNVYAAGGNSEGQLG-----LGDTE-- 125
Query: 274 PRRVVALDGIF-----IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIP 328
R L F IK +A G S LT G L WG + GQ+GLG +++ +P
Sbjct: 126 ERSTFHLISFFTKQHKIKQLAAGSYTSAVLTEDGQLVMWGDNSEGQIGLG--DKAYVSVP 183
Query: 329 NESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA--ANEKSTYAW 386
++ D + V ++CG+ H+ + +DG ++ +G G+ + ++
Sbjct: 184 HQVD----------IGKPVSCISCGYYHSALITQDGELYTFGEPENGKLGLSPKQLKNHK 233
Query: 387 YPSPVDWCVGEVRKLAAGGGHSAVLAD 413
P V G+V K+A GGGH+ VLA+
Sbjct: 234 LPQLVSGISGKVSKVACGGGHTVVLAE 260
>gi|195441394|ref|XP_002068495.1| GK20388 [Drosophila willistoni]
gi|194164580|gb|EDW79481.1| GK20388 [Drosophila willistoni]
Length = 1054
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 128/488 (26%), Positives = 216/488 (44%), Gaps = 94/488 (19%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++ WG GQ G G E Q+ IP Q+P + ++ IACGH HT + ++G
Sbjct: 3 LFCWGNASHGQLGMGGIEDEQILIPSQIPWK-------PDAPLRQIACGHRHTLFLTANG 55
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
++ G N+ QLG R P + +LQ+ V +I+CG+ + A+ E
Sbjct: 56 KVYACGNNDQAQLGHNLPTKR--PLLIPELQNYVVVAIACGSRHSMALTE---------W 104
Query: 142 SRLWVWGQN------QGSN-----FPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
++ WG N Q ++ P++ + + + Q++CG+ H +AL+ CG L +
Sbjct: 105 GQVLSWGDNDCGQLGQSTDQSIIELPKIIRSLVSKHVV--QIACGNNHSLALTSCGELYS 162
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL-EKITQVSCGEYHSAAVSENGEV 249
WG N YGQLG ++ P+ + L L + ++CG HS +S++ V
Sbjct: 163 WGSNIYGQLG-------VKPPQELSHCNYPLRLTTLLGIPLATIACGGNHSFLISKSSAV 215
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
+ +G + GQLG L P ++ L + ++ VACG S LT++G ++ G
Sbjct: 216 FGFGRNNCGQLG---LNDESNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGA 272
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHG 368
GQLG G T ++P + + ++ + + VACG+ HTL + GR++G
Sbjct: 273 GTYGQLGHGSNTN--EMLP--------RMVMELMGSTITQVACGNRHTLALVPSRGRVYG 322
Query: 369 WGYNSYGQAANEKSTYAWYP--------SPVDWCVGE---------VRKLAAGGGHSAV- 410
+G S GQ N + P SP D + + + ++ +GG S V
Sbjct: 323 FGLGSSGQLGNRSTNSVTLPQEVLGPWVSPSDSALLQSNDAKASVVIHQIFSGGDQSIVT 382
Query: 411 ---LADACSLKELCEFRLAESVTLSNASEIEDVASRTGSEALARLCERLREHSLHGDEFD 467
AD S +L ++ S+I + + ++ C R +E GD+
Sbjct: 383 TTLFADKVSPADLRHYK--------TKSQILTLTAEATNQ-----CTRFKE----GDQ-- 423
Query: 468 CDDDTRNG 475
CD D N
Sbjct: 424 CDLDLLNS 431
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 139/316 (43%), Gaps = 50/316 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y G N Q G +P + P P N + IACG H+ A
Sbjct: 51 LTANGKVYACGNNDQAQLGHN-------LPTKRP---LLIPELQNYVVVAIACGSRHSMA 100
Query: 77 VASDGTLFTWGANEFGQLGDGTEEG-RKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
+ G + +WG N+ GQLG T++ + P+ ++ L S+ V I+CG + + A+
Sbjct: 101 LTEWGQVLSWGDNDCGQLGQSTDQSIIELPKIIRSLVSKHVVQIACGNNHSLALT----- 155
Query: 136 DGTISTSRLWVWGQN-------------QGSNFP-RLFWGAFTPNTIICQVSCGSVHVVA 181
S L+ WG N N+P RL P + ++CG H
Sbjct: 156 ----SCGELYSWGSNIYGQLGVKPPQELSHCNYPLRLTTLLGIP---LATIACGGNHSFL 208
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
+S+ + +G N GQLG + Y L L + V+CG+ S
Sbjct: 209 ISKSSAVFGFGRNNCGQLGLNDESN--------RAYPTQLKTLRTL-GVRFVACGDEFSV 259
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-S 300
++ G V+T G G+ GQLGH S E+LPR V+ L G I VACG H+ AL S
Sbjct: 260 FLTNEGGVFTCGAGTYGQLGH---GSNTNEMLPRMVMELMGSTITQVACGNRHTLALVPS 316
Query: 301 KGALYAWGGSQAGQLG 316
+G +Y +G +GQLG
Sbjct: 317 RGRVYGFGLGSSGQLG 332
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 92/215 (42%), Gaps = 46/215 (21%)
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
+++ WG S GQLG ++ ++ L+P ++ ++ +ACG H+ LT+ G +YA
Sbjct: 2 DLFCWGNASHGQLGMGGIED-EQILIPSQIPWKPDAPLRQIACGHRHTLFLTANGKVYAC 60
Query: 308 GGSQAGQLGLGPQTRSFSLIP--------------------------------------N 329
G + QLG T+ LIP
Sbjct: 61 GNNDQAQLGHNLPTKRPLLIPELQNYVVVAIACGSRHSMALTEWGQVLSWGDNDCGQLGQ 120
Query: 330 ESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ---AANEKST 383
+D +P ++ V V +ACG++H+L G ++ WG N YGQ ++ +
Sbjct: 121 STDQSIIELPKIIRSLVSKHVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVKPPQELS 180
Query: 384 YAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
+ YP + +G + +A GG HS +++ + ++
Sbjct: 181 HCNYPLRLTTLLGIPLATIACGGNHSFLISKSSAV 215
>gi|146169381|ref|XP_001471365.1| regulator of chromosome condensation [Tetrahymena thermophila]
gi|146145109|gb|EDK31655.1| regulator of chromosome condensation [Tetrahymena thermophila
SB210]
Length = 448
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 172/382 (45%), Gaps = 67/382 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTE--EGRKHPEKVKQLQSEFVKSISCGAH 124
+ACG +HTA VA +G L+T G+N G+LG G + + P+ V L V +SCG
Sbjct: 27 LACGLDHTAFVAKNGYLYTMGSNALGKLGIGQQSLQNSFQPQLVSALSKYKVMQVSCGHS 86
Query: 125 CTAAIAEPRENDGTISTSRLWVWG---------QNQGSNF-PRL--FWGAFTPNTIICQV 172
T AI I + L+ WG + GS++ P+L F NT + V
Sbjct: 87 HTCAI---------IDSGELFSWGDSSEGQLGINSNGSHYNPQLVNFSDLKGINTFVTDV 137
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
SCG H VA+ + G + ++G + GQLG G K Y FL + L +I +
Sbjct: 138 SCGYYHTVAVLKNGQVCSFGSGKKGQLGTG---------NQNKQYKPFLLNS--LSQIIK 186
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
V CG YH+ + E+G VY+ GL GQLG + PR V+ L+ FIK + G
Sbjct: 187 VKCGFYHTLFLDESGRVYSCGLNDEGQLGQGHNEGNISS--PRLVLELEHSFIKKIFAGS 244
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVAC 352
HS A+T +Y +G SQ GQ L PQ + + V ++
Sbjct: 245 -HSAAITDANEIYFFGKSQLGQF-LYPQL------------------VRICQGDVNEISI 284
Query: 353 GHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAV-- 410
G+ + DG+++ WG N GQ S PS V+ + E + ++A G + V
Sbjct: 285 GNHFGVAVTYDGKVYSWGINQQGQLGQGDSDVRIIPSLVE-PLNEKKVISATCGENYVIC 343
Query: 411 --------LADACSLKELCEFR 424
LA S K++ +F+
Sbjct: 344 LGQVMNSRLAKLASQKKMLKFQ 365
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 160/349 (45%), Gaps = 62/349 (17%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N G+ G + Q QL L + + + ++CGH HT A+ G
Sbjct: 43 LYTMGSNALGKLGIGQQSLQNSFQPQLVSAL------SKYKVMQVSCGHSHTCAIIDSGE 96
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVK--QLQ--SEFVKSISCGAHCTAAIAEPRE--ND 136
LF+WG + GQLG + +P+ V L+ + FV +SCG + T A+ + + +
Sbjct: 97 LFSWGDSSEGQLGINSNGSHYNPQLVNFSDLKGINTFVTDVSCGYYHTVAVLKNGQVCSF 156
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI--ICQVSCGSVHVVALSECGLLQAWGYN 194
G+ +L QN+ + F N++ I +V CG H + L E G + + G N
Sbjct: 157 GSGKKGQLGTGNQNKQ-------YKPFLLNSLSQIIKVKCGFYHTLFLDESGRVYSCGLN 209
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK--ITQVSCGEYHSAAVSENGEVYTW 252
+ GQLG+G + PR++ ELE I ++ G HSAA+++ E+Y +
Sbjct: 210 DEGQLGQGHNEGNISSPRLV----------LELEHSFIKKIFAGS-HSAAITDANEIYFF 258
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G +GQ L P+ V G + +++ G A+T G +Y+WG +Q
Sbjct: 259 GKSQLGQF-----------LYPQLVRICQGD-VNEISIGNHFGVAVTYDGKVYSWGINQQ 306
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVA--CGHSHTL 358
GQLG G D+ R IP LV P N ++++ CG ++ +
Sbjct: 307 GQLGQG-------------DSDVRIIPSLVEPLNEKKVISATCGENYVI 342
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 121/258 (46%), Gaps = 39/258 (15%)
Query: 168 IICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQG---PRVIKGYAKFLDEA 224
+I Q++CG H +++ G L G N G+LG G + LQ P+++ +K+
Sbjct: 23 VIHQLACGLDHTAFVAKNGYLYTMGSNALGKLGIG--QQSLQNSFQPQLVSALSKY---- 76
Query: 225 PELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV--VALDG 282
K+ QVSCG H+ A+ ++GE+++WG S GQLG + S P+ V L G
Sbjct: 77 ----KVMQVSCGHSHTCAIIDSGELFSWGDSSEGQLG---INSNGSHYNPQLVNFSDLKG 129
Query: 283 I--FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI 340
I F+ DV+CG H+ A+ G + ++G + GQLG G Q + + P
Sbjct: 130 INTFVTDVSCGYYHTVAVLKNGQVCSFGSGKKGQLGTGNQNKQYK-------------PF 176
Query: 341 LVVP-NGVQLVACGHSHTLVYMRDGRIHGWGYN---SYGQAANEKSTYAWYPSPVDWCVG 396
L+ + + V CG HTL GR++ G N GQ NE + + P V
Sbjct: 177 LLNSLSQIIKVKCGFYHTLFLDESGRVYSCGLNDEGQLGQGHNEGNISS--PRLVLELEH 234
Query: 397 EVRKLAAGGGHSAVLADA 414
K G HSA + DA
Sbjct: 235 SFIKKIFAGSHSAAITDA 252
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 8/111 (7%)
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
I I +ACG H+ + G LY G + G+LG+G Q+ S P + +
Sbjct: 22 IVIHQLACGLDHTAFVAKNGYLYTMGSNALGKLGIGQQSLQNSFQP--------QLVSAL 73
Query: 343 VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDW 393
V V+CGHSHT + G + WG +S GQ + + P V++
Sbjct: 74 SKYKVMQVSCGHSHTCAIIDSGELFSWGDSSEGQLGINSNGSHYNPQLVNF 124
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
+I+ G+ AV DG +++WG N+ GQLG G + R P V+ L + V S +CG +
Sbjct: 281 EISIGNHFGVAVTYDGKVYSWGINQQGQLGQGDSDVRIIPSLVEPLNEKKVISATCGENY 340
Query: 126 TAAIAEPRENDGTISTSRL 144
+ G + SRL
Sbjct: 341 VICL-------GQVMNSRL 352
>gi|452823021|gb|EME30035.1| E3 ubiquitin-protein ligase HERC2 [Galdieria sulphuraria]
Length = 432
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 120/400 (30%), Positives = 169/400 (42%), Gaps = 88/400 (22%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
+ + +G N GQ G +G ER P P F A + R + +A G TAA++ D
Sbjct: 58 TLLTTFGLNLIGQLG-QGHER----PADRP---FPVEALSGKRIVYVAAGDSCTAAISLD 109
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G ++TWG+ E+G+LG + P V+ L+ + + +S G + AAI + DG
Sbjct: 110 GDVYTWGSGEYGKLGHNDDSNENLPRLVEALKGKNIVKVSIGGNHMAAI----DKDG--- 162
Query: 141 TSRLWVWGQNQGSN--------FPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
L+ WG+ + PRL G +I VSCG H A++E G + WG
Sbjct: 163 --HLYCWGRAASAGSGGTEHVFIPRLIKGDLEKEKVI-SVSCGRSHTAAVTEKGEVWTWG 219
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLD------------------------------ 222
G+LG G Q +V K +D
Sbjct: 220 NGYEGELGHGEKNSQYQPKKVQSLTEKVVDVACGRDFTIFVCESGLYSCGADDYGQLGLG 279
Query: 223 --------EAPE------LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSG 268
+ P L + +S G+YH A+ +G VYTWGLG GQLGH G
Sbjct: 280 RSHGERFVQTPRSLSGTGLSDVVAISAGDYHVCALGRDGLVYTWGLGREGQLGH-----G 334
Query: 269 DKE--LLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSL 326
+K L + V L I VACGG H+ A+T G LY WG + GQLG G +
Sbjct: 335 EKADCSLAKPVDNLRNFEIVQVACGGGHTAAVTKDGVLYTWGRGRDGQLGRGGEL----- 389
Query: 327 IPNESDTYFRNIPILV--VPNGVQL-VACGHSHTLVYMRD 363
ES +R P+ V +P G L V G H+ V +D
Sbjct: 390 ---ESIASYRTSPVQVTSLPAGAVLYVTLGSDHSAVLCQD 426
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 126/377 (33%), Positives = 169/377 (44%), Gaps = 44/377 (11%)
Query: 76 AVASDGTLFT-WGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
A +GTL T +G N GQLG G E P V+ L + + ++ G CTAAI+
Sbjct: 52 AALENGTLLTTFGLNLIGQLGQGHERPADRPFPVEALSGKRIVYVAAGDSCTAAISL--- 108
Query: 135 NDGTIST---SRLWVWGQNQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQ 189
DG + T G N SN PRL N I +VS G H+ A+ + G L
Sbjct: 109 -DGDVYTWGSGEYGKLGHNDDSNENLPRLVEALKGKN--IVKVSIGGNHMAAIDKDGHLY 165
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
WG G G T E + PR+IKG E EK+ VSCG H+AAV+E GEV
Sbjct: 166 CWG--RAASAGSGGT-EHVFIPRLIKG-------DLEKEKVISVSCGRSHTAAVTEKGEV 215
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
+TWG G G+LGH S + P++V +L + DVACG + + G LY+ G
Sbjct: 216 WTWGNGYEGELGHGEKNS---QYQPKKVQSLTEKVV-DVACGRDFTIFVCESG-LYSCGA 270
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG---VQLVACGHSHTLVYMRDGRI 366
GQLGLG RS F P + G V ++ G H RDG +
Sbjct: 271 DDYGQLGLG---RSHG-------ERFVQTPRSLSGTGLSDVVAISAGDYHVCALGRDGLV 320
Query: 367 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSLKELCEFRL 425
+ WG GQ + + PVD E+ ++A GGGH+A + L R
Sbjct: 321 YTWGLGREGQLGHGEKADCSLAKPVDNLRNFEIVQVACGGGHTAAVTKDGVLYTWGRGRD 380
Query: 426 AESVTLSNASEIEDVAS 442
+ L E+E +AS
Sbjct: 381 GQ---LGRGGELESIAS 394
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 13/118 (11%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG GQ G G + + K P + N + +ACG HTAAV DG
Sbjct: 320 VYTWGLGREGQLGH-GEKADCSLAK--PVDNL-----RNFEIVQVACGGGHTAAVTKDGV 371
Query: 83 LFTWGANEFGQLGDGTE-----EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
L+TWG GQLG G E R P +V L + V ++ G+ +A + + +N
Sbjct: 372 LYTWGRGRDGQLGRGGELESIASYRTSPVQVTSLPAGAVLYVTLGSDHSAVLCQDMKN 429
>gi|390353202|ref|XP_789385.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Strongylocentrotus purpuratus]
Length = 1070
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 160/338 (47%), Gaps = 31/338 (9%)
Query: 82 TLFTWGANEFGQLG----DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG 137
++F+WG + GQLG P +V L + ++ ISCG T + DG
Sbjct: 2 SVFSWGCTQDGQLGISGLGDDVPSLSSPREVPALAGKQIREISCGLRHTCVLLR----DG 57
Query: 138 TISTSRLWVWGQNQGSNFP--RLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNE 195
T+ GQ G + P L T +I QVSCG+ H +A+++ G + WG N+
Sbjct: 58 TVMMCGANDRGQ-LGQDRPGSELAHVPATETLVITQVSCGNDHTLAVTDRGQVLGWGRND 116
Query: 196 YGQLGRGI-TCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
GQ G E + PR +K + ++ QV+CG HS A++ +G ++ WG
Sbjct: 117 RGQCGLSTGDSEDKRKPRFLKSLSSC--------QVAQVACGSMHSMALTRDGRIFAWGD 168
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
S GQLG + P+++ +L G+ I+ +ACGG HS AL+ GA++ WG + GQ
Sbjct: 169 NSFGQLGIGAPGRTLYRDHPQQLSSLPGVPIRRLACGGWHSFALSVSGAVFGWGKNNCGQ 228
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGLG S P +N+ V+ +ACG ++T + G + +G S
Sbjct: 229 LGLGTTEDRVSPTP------LKNLKT----KQVKYIACGQNYTAILTASGGLFLFGQGSE 278
Query: 375 GQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
GQ + + P V +G E+ ++A G H+ VL
Sbjct: 279 GQLGHGSHSNEVNPRSVQGFLGSEITQVACGRQHTLVL 316
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 171/382 (44%), Gaps = 41/382 (10%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+++ WG GQ G G +P P PA A + +I+CG HT + DG
Sbjct: 2 SVFSWGCTQDGQLGISGLGDD--VPSLSSPR--EVPALAGKQIREISCGLRHTCVLLRDG 57
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP-------RE 134
T+ GAN+ GQLG + V ++ + +SCG T A+ + R
Sbjct: 58 TVMMCGANDRGQLGQ--DRPGSELAHVPATETLVITQVSCGNDHTLAVTDRGQVLGWGRN 115
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
+ G S G ++ PR + + QV+CGS+H +AL+ G + AWG N
Sbjct: 116 DRGQCGLST----GDSEDKRKPRFLKS--LSSCQVAQVACGSMHSMALTRDGRIFAWGDN 169
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+GQLG G G + + + + L P + I +++CG +HS A+S +G V+ WG
Sbjct: 170 SFGQLGIGAP-----GRTLYRDHPQQLSSLPGV-PIRRLACGGWHSFALSVSGAVFGWGK 223
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ GQLG L + + + P + L +K +ACG ++ LT+ G L+ +G GQ
Sbjct: 224 NNCGQLG---LGTTEDRVSPTPLKNLKTKQVKYIACGQNYTAILTASGGLFLFGQGSEGQ 280
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNS 373
LG G + + P + + + + VACG HTLV R GR G S
Sbjct: 281 LGHGSHSNEVN--PRSVQGF--------LGSEITQVACGRQHTLVLEGRTGRFFSLGQGS 330
Query: 374 YGQAA--NEKSTYAWYPSPVDW 393
GQ N+ S P P W
Sbjct: 331 KGQLGLDNDSSKSCASPVPGPW 352
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 103/230 (44%), Gaps = 28/230 (12%)
Query: 190 AWGYNEYGQLG---RGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+WG + GQLG G L PR + A ++I ++SCG H+ + +
Sbjct: 5 SWGCTQDGQLGISGLGDDVPSLSSPREVPALAG--------KQIREISCGLRHTCVLLRD 56
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
G V G GQLG EL V A + + I V+CG H+ A+T +G +
Sbjct: 57 GTVMMCGANDRGQLGQ---DRPGSEL--AHVPATETLVITQVSCGNDHTLAVTDRGQVLG 111
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRI 366
WG + GQ GL P + +++ V VACG H++ RDGRI
Sbjct: 112 WGRNDRGQCGLSTGDSEDKRKPR----FLKSLSSCQVAQ----VACGSMHSMALTRDGRI 163
Query: 367 HGWGYNSYGQ---AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLA 412
WG NS+GQ A ++ Y +P + G +R+LA GG HS L+
Sbjct: 164 FAWGDNSFGQLGIGAPGRTLYRDHPQQLSSLPGVPIRRLACGGWHSFALS 213
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK-GAL 304
+G ++ +G GS GQLGH S E+ PR V G I VACG H+ L + G
Sbjct: 453 SGGLFLFGQGSEGQLGH---GSHSNEVNPRSVKDFLGNEITQVACGRQHTLVLEGRTGGF 509
Query: 305 YAWGGSQAGQLGL--GPQTRSFSLIP 328
Y+ G GQLGL G SL+P
Sbjct: 510 YSLGQGSKGQLGLDNGSSKSCASLVP 535
>gi|386720863|ref|YP_006187188.1| hypothetical protein B2K_01550 [Paenibacillus mucilaginosus K02]
gi|384087987|gb|AFH59423.1| hypothetical protein B2K_01550 [Paenibacillus mucilaginosus K02]
Length = 1164
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 169/375 (45%), Gaps = 68/375 (18%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I + ++ WGYN GQ G G +P ++ L G IA G HT A
Sbjct: 644 IKSDGTVWGWGYNGHGQLGT-GTSNSTSVPGKVI-NLTGMKM--------IAGGENHTVA 693
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ SDGTL TWG N +GQLGD + R P +V L + ++S G + + A+ ++D
Sbjct: 694 LRSDGTLHTWGYNGYGQLGDDSTTTRYSPVQVSTLTNW--TAVSAGENHSLAL----KSD 747
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAF----TPNTI-----ICQVSCGSVHVVALSECGL 187
GT+ W +G N + +L G TP + + ++ G +AL G
Sbjct: 748 GTV-----WAFGYN---GYGQLGDGTTSSQRTPVQVKDLTGVVAIAAGKDFSLALKSDGT 799
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ +WG N YG+LG G T + + L + ++ G+YH A+ ++G
Sbjct: 800 VWSWGQNTYGELGNGTTTR-----------SSVPVQVALLTDVKAIAAGDYHGVALKKDG 848
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF-IKDVACGGVHSCALTSKGALYA 306
V+ WG G+LG+ S + + G+ IK +A G H+ AL S G +++
Sbjct: 849 SVFAWGYNGNGELGNSS-------TISQSTPVQSGVTGIKGIAAGPYHTLALKSDGTVWS 901
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN--GVQLVACGHSHTLVYMRDG 364
WG + GQLG G T R++P +P + +A G + ++ Y DG
Sbjct: 902 WGYNGYGQLGNGNNTS-------------RSVP-AAIPGLASIASIAAGENQSIAYGNDG 947
Query: 365 RIHGWGYNSYGQAAN 379
++ WG N+ GQ N
Sbjct: 948 ILYSWGRNANGQLGN 962
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 162/350 (46%), Gaps = 47/350 (13%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
L ++ HT + SDGT++ WG N GQLG GT P KV L +K I+ G +
Sbjct: 632 LAVSLLGNHTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVINLTG--MKMIAGGEN 689
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQN----QGSNFPRLFWGAFTPNTII--CQVSCGSVH 178
T A+ +DGT+ T WG N G + + +T+ VS G H
Sbjct: 690 HTVAL----RSDGTLHT-----WGYNGYGQLGDDSTTTRYSPVQVSTLTNWTAVSAGENH 740
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
+AL G + A+GYN YGQLG G T + P +K +L + ++ G+
Sbjct: 741 SLALKSDGTVWAFGYNGYGQLGDGTTSS-QRTPVQVK----------DLTGVVAIAAGKD 789
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
S A+ +G V++WG + G+LG+ + + +P +V L + K +A G H AL
Sbjct: 790 FSLALKSDGTVWSWGQNTYGELGNGTTT---RSSVPVQVALLTDV--KAIAAGDYHGVAL 844
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 358
G+++AWG + G+LG S T ++ P+ G++ +A G HTL
Sbjct: 845 KKDGSVFAWGYNGNGELG-------------NSSTISQSTPVQSGVTGIKGIAAGPYHTL 891
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
DG + WGYN YGQ N +T P+ + + + +AAG S
Sbjct: 892 ALKSDGTVWSWGYNGYGQLGNGNNTSRSVPAAIP-GLASIASIAAGENQS 940
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 143/305 (46%), Gaps = 50/305 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WGYN GQ G + P Q+ + W ++ G H+ A+ SDGT
Sbjct: 700 LHTWGYNGYGQLGDDSTTTRYS-PVQVSTL---------TNWTAVSAGENHSLALKSDGT 749
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ +G N +GQLGDGT ++ P +VK L V +I+ G + A+ ++DGT+
Sbjct: 750 VWAFGYNGYGQLGDGTTSSQRTPVQVKDLTG--VVAIAAGKDFSLAL----KSDGTV--- 800
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQV---------SCGSVHVVALSECGLLQAWGY 193
W WGQN + L G T +++ QV + G H VAL + G + AWGY
Sbjct: 801 --WSWGQN---TYGELGNGTTTRSSVPVQVALLTDVKAIAAGDYHGVALKKDGSVFAWGY 855
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
N G+LG T Q V G + I ++ G YH+ A+ +G V++WG
Sbjct: 856 NGNGELGNSSTIS--QSTPVQSG----------VTGIKGIAAGPYHTLALKSDGTVWSWG 903
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
GQLG+ + S +P + L I +A G S A + G LY+WG + G
Sbjct: 904 YNGYGQLGNGNNTS---RSVPAAIPGL--ASIASIAAGENQSIAYGNDGILYSWGRNANG 958
Query: 314 QLGLG 318
QLG G
Sbjct: 959 QLGNG 963
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 92/230 (40%), Gaps = 58/230 (25%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ +GYN GQ G G R P Q+ +L G A IA G + + A+ SDGT
Sbjct: 750 VWAFGYNGYGQLG-DGTTSSQRTPVQVK-DLTGVVA--------IAAGKDFSLALKSDGT 799
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE-------- 134
+++WG N +G+LG+GT P +V L VK+I+ G + A+ +
Sbjct: 800 VWSWGQNTYGELGNGTTTRSSVPVQVALLTD--VKAIAAGDYHGVALKKDGSVFAWGYNG 857
Query: 135 -----NDGTISTSR---------------------------LWVWGQN------QGSNFP 156
N TIS S +W WG N G+N
Sbjct: 858 NGELGNSSTISQSTPVQSGVTGIKGIAAGPYHTLALKSDGTVWSWGYNGYGQLGNGNNTS 917
Query: 157 RLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCE 206
R A I ++ G +A G+L +WG N GQLG G T +
Sbjct: 918 RSVPAAIPGLASIASIAAGENQSIAYGNDGILYSWGRNANGQLGNGTTVD 967
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 63/124 (50%), Gaps = 13/124 (10%)
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
V+ G H+ + S G ++ WG + GQLG G T + + +P + ++ G+
Sbjct: 634 VSLLGNHTMFIKSDGTVWGWGYNGHGQLGTG--TSNSTSVPGK----------VINLTGM 681
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH 407
+++A G +HT+ DG +H WGYN YGQ ++ +T + P V + ++AG H
Sbjct: 682 KMIAGGENHTVALRSDGTLHTWGYNGYGQLGDDSTTTRYSPVQVS-TLTNWTAVSAGENH 740
Query: 408 SAVL 411
S L
Sbjct: 741 SLAL 744
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 50/108 (46%), Gaps = 12/108 (11%)
Query: 3 INEIIGETARPVDNIPAKS--AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA 60
+ I G A P + KS ++ WGYN GQ G G +P +P G + A
Sbjct: 877 VTGIKGIAAGPYHTLALKSDGTVWSWGYNGYGQLGN-GNNTSRSVPAAIP----GLASIA 931
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
+ IA G + A +DG L++WG N GQLG+GT P KV
Sbjct: 932 S-----IAAGENQSIAYGNDGILYSWGRNANGQLGNGTTVDTNVPHKV 974
>gi|91201899|emb|CAJ74959.1| similar to chromosomal condensation regulatory protein [Candidatus
Kuenenia stuttgartiensis]
Length = 620
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/359 (30%), Positives = 160/359 (44%), Gaps = 55/359 (15%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
I+ G H+ A+ S+G L+ WG NE GQLGDGT + + P V+ + ++ CG +
Sbjct: 160 ISGGWSHSLALDSEGKLWAWGLNEDGQLGDGTNDSQTTPVAVQINALTTITAVDCGGDHS 219
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPN-------------TIICQVS 173
A+ S R+W WG N G T N T I +S
Sbjct: 220 MALD---------SLGRVWAWGYNGDGE----LGGGTTENNSNVPVPVPVPNLTDIIAIS 266
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
G + +ALS G + WG N GQLG G T + ++ L + +
Sbjct: 267 AGGEYSIALSSDGSVLTWGANSDGQLGNGNTDQNSVPTKIS-----------SLPLMKGI 315
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC-GG 292
S GE HS AV+E+G VY WGL GQ+G+ + + L P +V L I D C G
Sbjct: 316 SAGEAHSLAVTEDGFVYAWGLNDEGQIGNGEKSADNPVLNPVQVQGLTDI---DAVCAGA 372
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVAC 352
S AL G ++AWG + GQLG G T + S P E + + VAC
Sbjct: 373 TFSLALGIDGRVWAWGLNDEGQLGDG--TNTNSTTPVEVTNLAK----------ISAVAC 420
Query: 353 GHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
G H+L +R+G++ WG N GQ + + + P V + ++ +AAG HS +
Sbjct: 421 GSDHSLA-IRNGKVKSWGLNDEGQLGDGSTRSSSAPLDVT-GLSDIVYVAAGESHSLAI 477
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 141/305 (46%), Gaps = 44/305 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WGYN G+ G E +P +P + + I+ G E++ A++SDG+
Sbjct: 228 VWAWGYNGDGELGGGTTENNSNVPVPVPVPNL-------TDIIAISAGGEYSIALSSDGS 280
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ TWGAN GQLG+G + P K+ L +K IS G + A+ E DG +
Sbjct: 281 VLTWGANSDGQLGNGNTDQNSVPTKISSL--PLMKGISAGEAHSLAVTE----DGFV--- 331
Query: 143 RLWVWGQN---------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
+ WG N + ++ P L T I V G+ +AL G + AWG
Sbjct: 332 --YAWGLNDEGQIGNGEKSADNPVLNPVQVQGLTDIDAVCAGATFSLALGIDGRVWAWGL 389
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
N+ GQLG G + E L KI+ V+CG HS A+ NG+V +WG
Sbjct: 390 NDEGQLGDGTNTN-----------STTPVEVTNLAKISAVACGSDHSLAI-RNGKVKSWG 437
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
L GQLG S +S P V L I VA G HS A+TSKG +Y WG + G
Sbjct: 438 LNDEGQLGDGSTRSSSA---PLDVTGLSDIVY--VAAGESHSLAITSKGNIYVWGLNGDG 492
Query: 314 QLGLG 318
QLG G
Sbjct: 493 QLGDG 497
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 107/222 (48%), Gaps = 24/222 (10%)
Query: 162 AFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFL 221
A TP + Q+S G H +AL G L AWG NE GQLG G T + P ++ A
Sbjct: 150 APTPGVVTPQISGGWSHSLALDSEGKLWAWGLNEDGQLGDG-TNDSQTTPVAVQINA--- 205
Query: 222 DEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD 281
L IT V CG HS A+ G V+ WG G+LG + ++ +P V L
Sbjct: 206 -----LTTITAVDCGGDHSMALDSLGRVWAWGYNGDGELGGGTTENNSNVPVPVPVPNLT 260
Query: 282 GIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL 341
I ++ GG +S AL+S G++ WG + GQLG G + N T ++P++
Sbjct: 261 DIIA--ISAGGEYSIALSSDGSVLTWGANSDGQLGNGNTDQ------NSVPTKISSLPLM 312
Query: 342 VVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAAN-EKS 382
+ ++ G +H+L DG ++ WG N GQ N EKS
Sbjct: 313 ------KGISAGEAHSLAVTEDGFVYAWGLNDEGQIGNGEKS 348
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 116/257 (45%), Gaps = 46/257 (17%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLP--PELFGCPAGANSRWLDIACGHEHTAAVAS 79
++ WG N GQ G G Q +P ++ P + G I+ G H+ AV
Sbjct: 280 SVLTWGANSDGQLG-NGNTDQNSVPTKISSLPLMKG-----------ISAGEAHSLAVTE 327
Query: 80 DGTLFTWGANEFGQLGDGTEEGRK---HPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
DG ++ WG N+ GQ+G+G + +P +V+ L + ++ GA + A+ D
Sbjct: 328 DGFVYAWGLNDEGQIGNGEKSADNPVLNPVQVQGLTD--IDAVCAGATFSLALGI----D 381
Query: 137 GTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
G R+W WG N G+N T I V+CGS H +A+ G +++
Sbjct: 382 G-----RVWAWGLNDEGQLGDGTNTNSTTPVEVTNLAKISAVACGSDHSLAIRN-GKVKS 435
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG N+ GQLG G T P + G L I V+ GE HS A++ G +Y
Sbjct: 436 WGLNDEGQLGDGST-RSSSAPLDVTG----------LSDIVYVAAGESHSLAITSKGNIY 484
Query: 251 TWGLGSVGQLGHCSLQS 267
WGL GQLG + +S
Sbjct: 485 VWGLNGDGQLGDGTNRS 501
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 10/86 (11%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+ WG N GQ G G R P ++ G S + +A G H+ A+ S G
Sbjct: 433 VKSWGLNDEGQLG-DGSTRSSSAPL----DVTGL-----SDIVYVAAGESHSLAITSKGN 482
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKV 108
++ WG N GQLGDGT + P+ +
Sbjct: 483 IYVWGLNGDGQLGDGTNRSSRTPKTI 508
>gi|198462494|ref|XP_002135307.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
gi|198150848|gb|EDY73934.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
Length = 1052
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 174/384 (45%), Gaps = 54/384 (14%)
Query: 22 AIYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
A+Y WG GQ G G E Q+ +P Q+ + +S IACGH HT + ++
Sbjct: 2 ALYCWGDASHGQLGLGGIENEQILLPSQIEFK-------PDSPVQQIACGHRHTLFLTAN 54
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G ++ G N+ QLG E K P + +LQ+ V I+CG+ + A+ E
Sbjct: 55 GQVYACGNNDHHQLGH--ELPTKRPLPIPELQAYVVIQIACGSRHSMALTE--------- 103
Query: 141 TSRLWVWGQNQGSN-----------FPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQ 189
++ WG N P++ F + + Q++CG+ H +AL+ CG L
Sbjct: 104 WGQILSWGDNDCGQVGHSTDNDVIELPKIL--RFLVSRTVVQIACGNNHSLALTSCGELY 161
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL-EKITQVSCGEYHSAAVSENGE 248
+WG N YGQL G+Q P+ + L L + ++CG HS +S++
Sbjct: 162 SWGSNIYGQL-------GVQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSA 214
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
V+ WG + GQLG L P ++ ++ + ++ V CG +S LT++G ++ G
Sbjct: 215 VFGWGKNTCGQLG---LNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCG 271
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD-GRIH 367
GQLG G +IP + I ++ + + VACG+ HTL + GR++
Sbjct: 272 AGNYGQLGHGASNN--EMIP--------RMVIELMGSTITQVACGNRHTLALVPSGGRVY 321
Query: 368 GWGYNSYGQAANEKSTYAWYPSPV 391
+G + GQ + P V
Sbjct: 322 SFGLGASGQLGTRNTISQTLPKVV 345
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 157/340 (46%), Gaps = 38/340 (11%)
Query: 83 LFTWGANEFGQLGDGTEEGRK--HPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
L+ WG GQLG G E + P +++ V+ I+CG T + +
Sbjct: 3 LYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLT---------A 53
Query: 141 TSRLWVWGQNQ----GSNFP--RLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
+++ G N G P R ++ Q++CGS H +AL+E G + +WG N
Sbjct: 54 NGQVYACGNNDHHQLGHELPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDN 113
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+ GQ+G + ++ P++++ + Q++CG HS A++ GE+Y+WG
Sbjct: 114 DCGQVGHSTDNDVIELPKILRFLVS--------RTVVQIACGNNHSLALTSCGELYSWGS 165
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG S + P R+ + GI + +ACGG HS ++ A++ WG + GQ
Sbjct: 166 NIYGQLGVQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQ 225
Query: 315 LGLG-PQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNS 373
LGL Q R++ P++ + R + GV+ V CG +++ +G + G +
Sbjct: 226 LGLNDEQNRAY---PSQLKS-MRTL-------GVRFVTCGDEYSVFLTNEGGVFTCGAGN 274
Query: 374 YGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
YGQ + S P V +G + ++A G H+ L
Sbjct: 275 YGQLGHGASNNEMIPRMVIELMGSTITQVACGNRHTLALV 314
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 143/314 (45%), Gaps = 46/314 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLP-PELFGCPAGANSRWLDIACGHEHTA 75
+ A +Y G N Q G +L + LP PEL + IACG H+
Sbjct: 51 LTANGQVYACGNNDHHQLGH-----ELPTKRPLPIPELQAYVV------IQIACGSRHSM 99
Query: 76 AVASDGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
A+ G + +WG N+ GQ+G T+ + + P+ ++ L S V I+CG + + A+
Sbjct: 100 ALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALT---- 155
Query: 135 NDGTISTSRLWVWGQN----QGSNFPRLFWGAFTP---NTI----ICQVSCGSVHVVALS 183
S L+ WG N G P+ + P TI + ++CG H +S
Sbjct: 156 -----SCGELYSWGSNIYGQLGVQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLIS 210
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ + WG N GQLG + Y L L + V+CG+ +S +
Sbjct: 211 KSSAVFGWGKNTCGQLGLNDEQN--------RAYPSQLKSMRTL-GVRFVTCGDEYSVFL 261
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKG 302
+ G V+T G G+ GQLGH + + E++PR V+ L G I VACG H+ AL S G
Sbjct: 262 TNEGGVFTCGAGNYGQLGHG---ASNNEMIPRMVIELMGSTITQVACGNRHTLALVPSGG 318
Query: 303 ALYAWGGSQAGQLG 316
+Y++G +GQLG
Sbjct: 319 RVYSFGLGASGQLG 332
>gi|308535275|ref|YP_002138732.2| hypothetical protein [Geobacter bemidjiensis Bem]
gi|308052620|gb|ACH38936.2| LOW QUALITY PROTEIN: ATS1 domain repeat protein [Geobacter
bemidjiensis Bem]
Length = 1917
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 163/361 (45%), Gaps = 54/361 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WGYN GQ G G +P Q+ G +++W+ I+ G + T A+ SDGT
Sbjct: 1115 LWSWGYNAFGQLG-DGTTVNRYVPVQI---------GDDNKWISISAGVDFTLALKSDGT 1164
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+ WG N+ GQLGDGT R P ++ ++++ SI G + AA+ ++DGT
Sbjct: 1165 LWGWGRNDLGQLGDGTTTFRYSPVQIGN-STDWI-SIHAGGYHAAAL----KSDGT---- 1214
Query: 143 RLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
LW WG N GS +LF + +S G H +AL G L WG N
Sbjct: 1215 -LWAWGGNYNGQVGNGSTLNQLFPLQIGTDRSWTAISAGGAHTLALKANGTLWGWGSNSS 1273
Query: 197 GQLGRGI-TCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
GQ+G G + P I + +S G YHS A+ + ++ WG
Sbjct: 1274 GQVGLGYGSLAQYTSPTRIGTAGNW----------KLISAGTYHSMALQTDNTLWGWGSN 1323
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
GQLG+ + S + P ++ ++ A G H+ AL GAL+AWG + +G+L
Sbjct: 1324 QYGQLGNGTTSSYGQLSFPVKIGSVSNWSSVSAAYG--HTVALDLNGALWAWGRNSSGEL 1381
Query: 316 GLGPQTRSFSLIPNESDTYFRNIPILVVPNGV-QLVACGHSHTLVYMRDGRIHGWGYNSY 374
G ++ + + P+ + N + G S+T+ DG + WG N Y
Sbjct: 1382 G-------------DATSVDKVYPVRIGTNATWTTMETGDSYTVASKSDGTLWAWGNNWY 1428
Query: 375 G 375
G
Sbjct: 1429 G 1429
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 107/332 (32%), Positives = 153/332 (46%), Gaps = 48/332 (14%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++ G HT A+ SDGTL++WG N FGQLGDGT R P ++ ++++ SIS G T
Sbjct: 1099 VSAGTRHTIALKSDGTLWSWGYNAFGQLGDGTTVNRYVPVQIGD-DNKWI-SISAGVDFT 1156
Query: 127 AAIAEPRENDGTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVV 180
A+ ++DGT LW WG+N G+ R +T + G H
Sbjct: 1157 LAL----KSDGT-----LWGWGRNDLGQLGDGTTTFRYSPVQIGNSTDWISIHAGGYHAA 1207
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
AL G L AWG N GQ+G G T L F + T +S G H+
Sbjct: 1208 ALKSDGTLWAWGGNYNGQVGNGSTLNQL-----------FPLQIGTDRSWTAISAGGAHT 1256
Query: 241 AAVSENGEVYTWGLGSVGQ--LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
A+ NG ++ WG S GQ LG+ SL + P R + G + K ++ G HS AL
Sbjct: 1257 LALKANGTLWGWGSNSSGQVGLGYGSLA---QYTSPTR-IGTAGNW-KLISAGTYHSMAL 1311
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLVACGHSH 356
+ L+ WG +Q GQLG G T S+ + + P+ + V N V+ + H
Sbjct: 1312 QTDNTLWGWGSNQYGQLGNG-TTSSYGQL---------SFPVKIGSVSNWSS-VSAAYGH 1360
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYP 388
T+ +G + WG NS G+ + S YP
Sbjct: 1361 TVALDLNGALWAWGRNSSGELGDATSVDKVYP 1392
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 106/408 (25%), Positives = 152/408 (37%), Gaps = 124/408 (30%)
Query: 3 INEIIGETARPVDNIPAKS--AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA 60
++++I +A D I KS I WGYN Q IP++ P F
Sbjct: 313 LSDVIAVSAGGTDTIVLKSDGTIVAWGYN---------SHSQDNIPQK--PGCFSA---- 357
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
++ G H+ A+ DGT+ WG+N +GQ P + V ++
Sbjct: 358 ------VSVGGYHSTAINPDGTITAWGSNLYGQ--------ANVPTGLNN-----VSAVG 398
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVV 180
G T A+ ++DGT+ T WG N S P G + ++ G H +
Sbjct: 399 IGEGVTVAL----KSDGTVVT-----WGHN--SKTPPAVSG-------VTAIAVGGFHAL 440
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVI---------------------KGYAK 219
AL + +WG + YG+ + GL G I GY +
Sbjct: 441 ALKPDATVVSWGTDYYGET---MVPAGLNGVSAIAAGFYHSLALKADGSLVAWGNNGYGQ 497
Query: 220 FLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA 279
A L +T ++ G H+ AV +G V WG S GQ + SG
Sbjct: 498 VSIPA-GLNNVTSIAAGMDHNVAVRSDGTVAAWGSNSSGQATVPAGLSG----------- 545
Query: 280 LDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIP 339
++ VA G +HS AL + G + AWG S GQ
Sbjct: 546 -----VRQVAAGDLHSVALKTDGTVIAWGDSTYGQT------------------------ 576
Query: 340 ILVVPNG---VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTY 384
VP G V VA G+ +TL G + GWG N +GQA KS Y
Sbjct: 577 --AVPAGLTDVVAVAAGNGYTLALKSGGTVVGWGDNRFGQATLPKSPY 622
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 111/253 (43%), Gaps = 43/253 (16%)
Query: 167 TIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPE 226
T+ +VS G+ H +AL G L +WGYN +GQLG G T R + + D+
Sbjct: 1094 TVFSKVSAGTRHTIALKSDGTLWSWGYNAFGQLGDGTTVN-----RYVP--VQIGDD--- 1143
Query: 227 LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG-------HCSLQSGDKELLPRRVVA 279
K +S G + A+ +G ++ WG +GQLG + +Q G+
Sbjct: 1144 -NKWISISAGVDFTLALKSDGTLWGWGRNDLGQLGDGTTTFRYSPVQIGNST-------- 1194
Query: 280 LDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIP 339
D I I GG H+ AL S G L+AWGG+ GQ+G G + +D + I
Sbjct: 1195 -DWISIH---AGGYHAAALKSDGTLWAWGGNYNGQVGNGSTLNQLFPLQIGTDRSWTAI- 1249
Query: 340 ILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDW-CVGEV 398
+ G +HTL +G + GWG NS GQ + A Y SP G
Sbjct: 1250 -----------SAGGAHTLALKANGTLWGWGSNSSGQVGLGYGSLAQYTSPTRIGTAGNW 1298
Query: 399 RKLAAGGGHSAVL 411
+ ++AG HS L
Sbjct: 1299 KLISAGTYHSMAL 1311
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 142/364 (39%), Gaps = 98/364 (26%)
Query: 56 CPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
PAG S + IA G HT A+ SDGT+ WG N GQ+ P +
Sbjct: 193 VPAGL-SGVVAIAAGDLHTLALKSDGTVVAWGYNYDGQV--------TVPTGLAG----- 238
Query: 116 VKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQN--QGSNFPRLFWGAFTPNTIICQVS 173
V +I+ GA+ +AA+ + DGT+ VWG N +N P G + ++
Sbjct: 239 VTAIAAGANNSAAV----KTDGTVV-----VWGMNYTNNNNVPAGLTG-------VAAIA 282
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQL---------------GRGITCEGLQGPRVIKGY- 217
G HVVAL G + AWG N YGQ G G V GY
Sbjct: 283 VGG-HVVALKSDGSVVAWGNNNYGQARVPAGLSDVIAVSAGGTDTIVLKSDGTIVAWGYN 341
Query: 218 AKFLDEAPELEK-ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRR 276
+ D P+ + VS G YHS A++ +G + WG GQ ++ +G +
Sbjct: 342 SHSQDNIPQKPGCFSAVSVGGYHSTAINPDGTITAWGSNLYGQ---ANVPTGLNNVSAVG 398
Query: 277 V-----VAL--DGIFIK---------------DVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ VAL DG + +A GG H+ AL + +WG G+
Sbjct: 399 IGEGVTVALKSDGTVVTWGHNSKTPPAVSGVTAIAVGGFHALALKPDATVVSWGTDYYGE 458
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
+++P NGV +A G H+L DG + WG N Y
Sbjct: 459 ----------TMVPAGL-------------NGVSAIAAGFYHSLALKADGSLVAWGNNGY 495
Query: 375 GQAA 378
GQ +
Sbjct: 496 GQVS 499
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 124/315 (39%), Gaps = 99/315 (31%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++ G H+ A+ SDGT+ WG+N +GQ P + V +I+ G +
Sbjct: 125 VSIGGSHSLALKSDGTVAAWGSNAYGQ--------SSVPSGLSN-----VVAIAAGERHS 171
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQ--GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
AA+ ++DGT+ WG N S+ P G + ++ G +H +AL
Sbjct: 172 AAL----KSDGTVIE-----WGDNSYGQSSVPAGLSG-------VVAIAAGDLHTLALKS 215
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G + AWGYN GQ+ GL G +T ++ G +SAAV
Sbjct: 216 DGTVVAWGYNYDGQV---TVPTGLAG-------------------VTAIAAGANNSAAVK 253
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
+G V WG+ + +P + + I A GG H AL S G++
Sbjct: 254 TDGTVVVWGMNYT-----------NNNNVPAGLTGVAAI-----AVGG-HVVALKSDGSV 296
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG---VQLVACGHSHTLVYM 361
AWG + GQ VP G V V+ G + T+V
Sbjct: 297 VAWGNNNYGQ--------------------------ARVPAGLSDVIAVSAGGTDTIVLK 330
Query: 362 RDGRIHGWGYNSYGQ 376
DG I WGYNS+ Q
Sbjct: 331 SDGTIVAWGYNSHSQ 345
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 118/282 (41%), Gaps = 39/282 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N++GQ G QL P Q+ G + W I+ G HT A+ ++GT
Sbjct: 1215 LWAWGGNYNGQVGNGSTLNQL-FPLQI---------GTDRSWTAISAGGAHTLALKANGT 1264
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+ WG+N GQ+G G ++ + + K IS G + + A+ + D T
Sbjct: 1265 LWGWGSNSSGQVGLGYGSLAQYTSPTRIGTAGNWKLISAGTYHSMAL----QTDNT---- 1316
Query: 143 RLWVWGQNQ--------GSNFPRL-FWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
LW WG NQ S++ +L F + VS H VAL G L AWG
Sbjct: 1317 -LWGWGSNQYGQLGNGTTSSYGQLSFPVKIGSVSNWSSVSAAYGHTVALDLNGALWAWGR 1375
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
N G+LG + + + P I A + T + G+ ++ A +G ++ WG
Sbjct: 1376 NSSGELGDATSVDKVY-PVRIGTNATW----------TTMETGDSYTVASKSDGTLWAWG 1424
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
G LG + D + V I + GG+++
Sbjct: 1425 NNWYGGLGDGTASERDGATTATKYVPTHINRILSINNGGIYT 1466
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 86/200 (43%), Gaps = 30/200 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTA 75
+ A ++ WG N SGQ G G Q P ++ G W I+ G H+
Sbjct: 1259 LKANGTLWGWGSNSSGQVGLGYGSLAQYTSPTRI---------GTAGNWKLISAGTYHSM 1309
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGR---KHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
A+ +D TL+ WG+N++GQLG+GT P K+ + + S+S T A+
Sbjct: 1310 ALQTDNTLWGWGSNQYGQLGNGTTSSYGQLSFPVKIGSVSNW--SSVSAAYGHTVAL--- 1364
Query: 133 RENDGTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
+ +G LW WG+N ++ +++ N + G + VA G
Sbjct: 1365 -DLNG-----ALWAWGRNSSGELGDATSVDKVYPVRIGTNATWTTMETGDSYTVASKSDG 1418
Query: 187 LLQAWGYNEYGQLGRGITCE 206
L AWG N YG LG G E
Sbjct: 1419 TLWAWGNNWYGGLGDGTASE 1438
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 79/191 (41%), Gaps = 44/191 (23%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A++ WG N SG+ G + K P + G N+ W + G +T A SDG
Sbjct: 1369 ALWAWGRNSSGELGDA-----TSVDKVYPVRI-----GTNATWTTMETGDSYTVASKSDG 1418
Query: 82 TLFTWGANEFGQLGDGTEEGRKH--------PEKVKQLQS-----EFVKSISCGAHCTAA 128
TL+ WG N +G LGDGT R P + ++ S + K+ S AA
Sbjct: 1419 TLWAWGNNWYGGLGDGTASERDGATTATKYVPTHINRILSINNGGIYTKNSSVSLRVLAA 1478
Query: 129 -----IAEPRENDGTI-------STSRLWVWGQNQGSN--FPRL------FWGAFTPNTI 168
A NDG+ +T+R W G+ F +L + GAF+ +TI
Sbjct: 1479 DANGIAATQFSNDGSTWTNPEPYATTRTWTLEPGDGTKTVFAKLKDNVGNWSGAFS-STI 1537
Query: 169 ICQVSCGSVHV 179
I + +V V
Sbjct: 1538 IVDTTAPTVSV 1548
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 65/161 (40%), Gaps = 41/161 (25%)
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP 344
+ +++ G H ++TS GA++ WGGS G+ + P
Sbjct: 83 VTNISTFGDHILSITSDGAIWGWGGSTYGET--------------------------IAP 116
Query: 345 NGVQLVA---CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL 401
G+ VA G SH+L DG + WG N+YGQ S V + V +
Sbjct: 117 VGLSAVASVSIGGSHSLALKSDGTVAAWGSNAYGQ------------SSVPSGLSNVVAI 164
Query: 402 AAGGGHSAVLADACSLKELCEFRLAESVTLSNASEIEDVAS 442
AAG HSA L ++ E + +S + S + +A+
Sbjct: 165 AAGERHSAALKSDGTVIEWGDNSYGQSSVPAGLSGVVAIAA 205
>gi|392343043|ref|XP_003754780.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Rattus
norvegicus]
Length = 1035
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 115/367 (31%), Positives = 175/367 (47%), Gaps = 62/367 (16%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++CG EHTA V + L+ +G+N +GQLG G++ P +K L+ E VK +CG + T
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEKVKLAACGRNHT 137
Query: 127 AAIAEPRENDGTISTSRLWVW---GQNQG----------SNFPRLFWGAFTPNTIICQVS 173
+ST V+ G N+G F ++ G FTP+ II Q+S
Sbjct: 138 L-----------VSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQI--GFFTPSDIIKQLS 184
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
G+ AL+E G L WG N GQ+G V G + I+ +
Sbjct: 185 AGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTVG-----------KPISWI 233
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL-----PRRVVALDGIFIKDV 288
SCG YHSA V+ +GE+YT+G G+LG + +LL P+RV+ + I+ V
Sbjct: 234 SCGYYHSAFVTTDGELYTFGEPENGKLGLPN------QLLINHRSPQRVLGIPDKVIQ-V 286
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
ACGG H+ LT K +YA+G Q GQLGLG +F +E R + +
Sbjct: 287 ACGGGHTVVLTEK-VVYAFGLGQFGQLGLG----TFLFETSEPKIIDR-----IKDQKIS 336
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQ--AANEKSTYAWYPSP-VDWCVGEVRKLAAGG 405
++CG +HT + G ++ +G +G+ E T ++P+ ++ V+ +A GG
Sbjct: 337 HISCGENHTALMTDIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLKFTVQLIACGG 396
Query: 406 GHSAVLA 412
H V A
Sbjct: 397 CHMLVFA 403
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 125/278 (44%), Gaps = 29/278 (10%)
Query: 141 TSRLWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
T ++ +G+ + N P FW F + IC +SCG H ++ L +G N +GQL
Sbjct: 49 TGAVFTFGKTKFAENIPSKFW--FKNDVPIC-LSCGDEHTAIVTGNNKLYMFGSNNWGQL 105
Query: 200 GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ 259
G G + + P IK A + EK+ +CG H+ ++ G VY G + GQ
Sbjct: 106 GLG-SKSAISKPTCIK--------ALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQ 156
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LG + D++ + IK ++ G S ALT G L+ WG + GQ+GL
Sbjct: 157 LGLGD--TDDRDTFHQIGFFTPSDIIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGL-- 212
Query: 320 QTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ--A 377
+ +S IP+E + V + ++CG+ H+ DG ++ +G G+
Sbjct: 213 KNKSNVCIPHE----------VTVGKPISWISCGYYHSAFVTTDGELYTFGEPENGKLGL 262
Query: 378 ANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADAC 415
N+ P V +V ++A GGGH+ VL +
Sbjct: 263 PNQLLINHRSPQRVLGIPDKVIQVACGGGHTVVLTEKV 300
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 90/195 (46%), Gaps = 38/195 (19%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+++WG N GQ G K + + IP ++ G W I+CG+ H+A V +DG
Sbjct: 199 LFMWGDNSEGQIGLKNK-SNVCIPHEV-------TVGKPISW--ISCGYYHSAFVTTDGE 248
Query: 83 LFTWGANEFGQLGDGTEEGRKH--PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
L+T+G E G+LG + H P++V + + ++ ++CG T + E
Sbjct: 249 LYTFGEPENGKLGLPNQLLINHRSPQRVLGIPDKVIQ-VACGGGHTVVLTE--------- 298
Query: 141 TSRLWVWGQNQGSNFPRLFWGAF-----TPNTI-------ICQVSCGSVHVVALSECGLL 188
++ +G Q F +L G F P I I +SCG H +++ GL+
Sbjct: 299 -KVVYAFGLGQ---FGQLGLGTFLFETSEPKIIDRIKDQKISHISCGENHTALMTDIGLM 354
Query: 189 QAWGYNEYGQLGRGI 203
+G +G+LG G+
Sbjct: 355 YTFGDGRHGKLGLGM 369
>gi|332028555|gb|EGI68592.1| Putative E3 ubiquitin-protein ligase HERC4 [Acromyrmex echinatior]
Length = 1049
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 170/382 (44%), Gaps = 54/382 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQ-LRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++ WG G+ G G E + + +P+++ +N IACG +T A+ +G
Sbjct: 1 MFCWGSTIHGELGLGGIEDENIFMPREV-----DFIEASNVE--QIACGENYTVAITKEG 53
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+++ G N++GQLG E+ RK + + L + + I+CG T A+ E
Sbjct: 54 KVYSCGNNDYGQLGH--EKARKRLQLIPGLDAFVFRKIACGNCHTLAVNE---------W 102
Query: 142 SRLWVWGQNQGSNF-----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
+L+ WG N PR+ +I Q++CG+ H +AL+ G L A
Sbjct: 103 GQLFSWGCNMNGQLGLNSVDCTERVPRMI--KVLGTNVIVQIACGTEHSIALTNDGELYA 160
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG N GQLG G P+ I A I ++CG YH+ +S++G V+
Sbjct: 161 WGSNREGQLGLGSYTTTEIKPKRISTLAAV--------PIAFIACGGYHTIVISKSGAVF 212
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
+WG + GQLG +Q + LP ++ L + CG S LT G ++ G
Sbjct: 213 SWGRNTFGQLGLNDVQQRN---LPCQLRTLRNAKVCYATCGEEFSVFLTMDGGVFTCGAG 269
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGW 369
GQLG G T ++P + + ++ + V ++CG HTL + GR++ W
Sbjct: 270 MYGQLGHGNTTN--EILPRQV--------MELMGSTVTQISCGKRHTLALVPSRGRVYAW 319
Query: 370 GYNSYGQAANEKSTYAWYPSPV 391
G GQ N S A P V
Sbjct: 320 GLGGAGQLGNRASQSATTPQVV 341
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/320 (31%), Positives = 152/320 (47%), Gaps = 60/320 (18%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I + +Y G N GQ G + ++L++ L +F IACG+ HT A
Sbjct: 49 ITKEGKVYSCGNNDYGQLGHEKARKRLQLIPGLDAFVFR----------KIACGNCHTLA 98
Query: 77 VASDGTLFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
V G LF+WG N GQLG + + + P +K L + + I+CG + A+ N
Sbjct: 99 VNEWGQLFSWGCNMNGQLGLNSVDCTERVPRMIKVLGTNVIVQIACGTEHSIALT----N 154
Query: 136 DGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI------------ICQVSCGSVHVVALS 183
DG L+ WG N+ +L G++T I I ++CG H + +S
Sbjct: 155 DG-----ELYAWGSNREG---QLGLGSYTTTEIKPKRISTLAAVPIAFIACGGYHTIVIS 206
Query: 184 ECGLLQAWGYNEYGQLG------RGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
+ G + +WG N +GQLG R + C+ R ++ K+ +CGE
Sbjct: 207 KSGAVFSWGRNTFGQLGLNDVQQRNLPCQ----LRTLRN-----------AKVCYATCGE 251
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
S ++ +G V+T G G GQLGH + E+LPR+V+ L G + ++CG H+ A
Sbjct: 252 EFSVFLTMDGGVFTCGAGMYGQLGH---GNTTNEILPRQVMELMGSTVTQISCGKRHTLA 308
Query: 298 LT-SKGALYAWGGSQAGQLG 316
L S+G +YAWG AGQLG
Sbjct: 309 LVPSRGRVYAWGLGGAGQLG 328
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 162/341 (47%), Gaps = 42/341 (12%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+F WG+ G+LG G +E P +V +++ V+ I+CG + T AI + +G +
Sbjct: 1 MFCWGSTIHGELGLGGIEDENIFMPREVDFIEASNVEQIACGENYTVAITK----EGKVY 56
Query: 141 TSRLWVWGQ---NQGSNFPRLFWG--AFTPNTIICQVSCGSVHVVALSECGLLQAWGYNE 195
+ +GQ + +L G AF + +++CG+ H +A++E G L +WG N
Sbjct: 57 SCGNNDYGQLGHEKARKRLQLIPGLDAF----VFRKIACGNCHTLAVNEWGQLFSWGCNM 112
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
GQLG + PR+IK I Q++CG HS A++ +GE+Y WG
Sbjct: 113 NGQLGLNSVDCTERVPRMIKVLGT--------NVIVQIACGTEHSIALTNDGELYAWGSN 164
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
GQLG S + E+ P+R+ L + I +ACGG H+ ++ GA+++WG + GQL
Sbjct: 165 REGQLGLGSYTT--TEIKPKRISTLAAVPIAFIACGGYHTIVISKSGAVFSWGRNTFGQL 222
Query: 316 GLGPQTRSFSLIPNESDTYFRNIP--ILVVPNG-VQLVACGHSHTLVYMRDGRIHGWGYN 372
GL +D RN+P + + N V CG ++ DG + G
Sbjct: 223 GL-------------NDVQQRNLPCQLRTLRNAKVCYATCGEEFSVFLTMDGGVFTCGAG 269
Query: 373 SYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
YGQ + +T P V +G V +++ G H+ L
Sbjct: 270 MYGQLGHGNTTNEILPRQVMELMGSTVTQISCGKRHTLALV 310
>gi|310825568|ref|YP_003957926.1| bnr repeat domain-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|309398640|gb|ADO76099.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 482
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 119/390 (30%), Positives = 181/390 (46%), Gaps = 62/390 (15%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A ++ G N +GQ G G P+ +P SR + +A G H A+
Sbjct: 140 ADGTVWACGSNSAGQLG-NGTTAARSAPRPVP---------GLSRAVAVAAGGSHALALC 189
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
+DGT++ WG N +GQLG+G+ R P +V LQ V +++ G + A+ DGT
Sbjct: 190 ADGTVWAWGNNGYGQLGNGSTAHRATPVQVPGLQG--VVAVAGGYMHSLALCA----DGT 243
Query: 139 ISTSRLWVWGQNQGSNFPRLFWGAF----TPNTI-----ICQVSCGSVHVVALSECGLLQ 189
+ W WG N ++ +L G TP + + V+ G H +AL G +
Sbjct: 244 V-----WAWGFN---DYGQLGNGTTVHSPTPVPVPGLSQVVSVAAGGFHSLALCADGTVW 295
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
AWG N +GQLG ++ + + P ++G L ++ V+ G YHS AV G +
Sbjct: 296 AWGNNGFGQLGEAVSTQRTK-PGRVEG----------LREVVAVAGGFYHSLAVRAGGSL 344
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
++WG GQLG+ S S + P V L + VA GG+HS A+ + G ++AWG
Sbjct: 345 WSWGNNYSGQLGNGSFSSSAR---PAPVQGLGA--VTSVAAGGMHSVAVQADGTVWAWGR 399
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGW 369
++ GQLG R+ E T R +P L G VA G H+L G + W
Sbjct: 400 NEEGQLG---HERA-----PERATPVR-VPGL---QGEVAVAAGFYHSLSVQAGGSLWAW 447
Query: 370 GYNSYGQAANEKSTYAWYPSPVDWCVGEVR 399
G N +GQ + ++ P+P W G+ R
Sbjct: 448 GLNDFGQLGDSEAPLMPVPAP-GWAQGKAR 476
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 119/362 (32%), Positives = 169/362 (46%), Gaps = 56/362 (15%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+A G++++ A+ +DGT++ G+N GQLG+GT R P V L S V + G+H
Sbjct: 128 VAGGYQYSLALHADGTVWACGSNSAGQLGNGTTAARSAPRPVPGL-SRAVAVAAGGSHAL 186
Query: 127 AAIAEPRENDGTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTI-----ICQVSCG 175
A A DGT+ W WG N GS R TP + + V+ G
Sbjct: 187 ALCA-----DGTV-----WAWGNNGYGQLGNGSTAHRA-----TPVQVPGLQGVVAVAGG 231
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
+H +AL G + AWG+N+YGQLG G T + P + P L ++ V+
Sbjct: 232 YMHSLALCADGTVWAWGFNDYGQLGNGTT---VHSPTPV--------PVPGLSQVVSVAA 280
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
G +HS A+ +G V+ WG GQLG K P RV L + VA G HS
Sbjct: 281 GGFHSLALCADGTVWAWGNNGFGQLGEAVSTQRTK---PGRVEGLREVVA--VAGGFYHS 335
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS 355
A+ + G+L++WG + +GQLG G SFS + R P+ + V VA G
Sbjct: 336 LAVRAGGSLWSWGNNYSGQLGNG----SFS-------SSARPAPVQGL-GAVTSVAAGGM 383
Query: 356 HTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADAC 415
H++ DG + WG N GQ +E++ P V GEV +AAG HS +
Sbjct: 384 HSVAVQADGTVWAWGRNEEGQLGHERAPERATPVRVPGLQGEV-AVAAGFYHSLSVQAGG 442
Query: 416 SL 417
SL
Sbjct: 443 SL 444
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 91/190 (47%), Gaps = 20/190 (10%)
Query: 223 EAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG 282
+A + + V+ G +S A+ +G V+ G S GQLG+ + + PR V L
Sbjct: 118 QAADQRGVRAVAGGYQYSLALHADGTVWACGSNSAGQLGNGTTAA---RSAPRPVPGLSR 174
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
VA GG H+ AL + G ++AWG + GQLG G T R P+ V
Sbjct: 175 AVA--VAAGGSHALALCADGTVWAWGNNGYGQLGNG-------------STAHRATPVQV 219
Query: 343 VP-NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL 401
GV VA G+ H+L DG + WG+N YGQ N + ++ P PV + +V +
Sbjct: 220 PGLQGVVAVAGGYMHSLALCADGTVWAWGFNDYGQLGNGTTVHSPTPVPVP-GLSQVVSV 278
Query: 402 AAGGGHSAVL 411
AAGG HS L
Sbjct: 279 AAGGFHSLAL 288
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 62/134 (46%), Gaps = 21/134 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +++ WG N+SGQ G R P + G GA + +A G H+ A
Sbjct: 338 VRAGGSLWSWGNNYSGQLGNGSFSSSAR-----PAPVQGL--GAVT---SVAAGGMHSVA 387
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V +DGT++ WG NE GQLG R P +V LQ E +++ G + + ++
Sbjct: 388 VQADGTVWAWGRNEEGQLGHERAPERATPVRVPGLQGEV--AVAAGFYHSLSVQ------ 439
Query: 137 GTISTSRLWVWGQN 150
+ LW WG N
Sbjct: 440 ---AGGSLWAWGLN 450
>gi|148263849|ref|YP_001230555.1| regulator of chromosome condensation, RCC1 [Geobacter
uraniireducens Rf4]
gi|146397349|gb|ABQ25982.1| regulator of chromosome condensation, RCC1 [Geobacter
uraniireducens Rf4]
Length = 417
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 122/396 (30%), Positives = 169/396 (42%), Gaps = 52/396 (13%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
S WGYN GQ G + + P GA +A G +H+ A +
Sbjct: 49 NSTTMAWGYNGFGQLG------DVSLNNSASPVKVSGLVGAKG----VAIGADHSLAFFN 98
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
+ T+ WG N FGQLG+GT P VK L + S A+A + +
Sbjct: 99 NSTVRAWGYNGFGQLGNGTTTYSNIPVPVKTLIGT---ASSINLTGVTAVAAGGFHSLAL 155
Query: 140 STSRLWVWGQNQGSNFPR-------LFWGAFT---PNTI----ICQVSCGSVHVVALSEC 185
+W WG+N R L G PN I I +++ G H +AL
Sbjct: 156 KNGTVWSWGENTNGQLGRNVTDTSPLIAGQVMTDPPNGIGLTSITRIAAGGSHSLALDSS 215
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + AWGYN YGQLG G + + P + G + ++ G S AV
Sbjct: 216 GAVWAWGYNGYGQLGDGSLVD-KKLPVKLTGIT---------VPVVAIAAGGAFSVAVDN 265
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI---FIKDVACGGVHSCALTSKG 302
NG V+ WG GQLG+ S + +P +VV DG IK +A G H AL S G
Sbjct: 266 NGAVWAWGYNGFGQLGNKSTTDSN---VPVQVVLEDGTPLPNIKAIAAGLDHVLALDSNG 322
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDT-YFRNIPILVVPNGVQ-LVACGHSHTLVY 360
A++AWG + GQLG S + + + T + P V +GV ++A GH HTL
Sbjct: 323 AIWAWGYNGLGQLGNNTTINSSTPVQVPAFTAALIDSPFTV--DGVNPILAAGH-HTLAR 379
Query: 361 MRDGRIHGWGYNSYGQAA----NEKSTYAWYPSPVD 392
DG + WG N+YGQ + T+ P P+D
Sbjct: 380 KADGTLWAWGDNAYGQLGFAPPSNLETFITAPRPID 415
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 98/232 (42%), Gaps = 30/232 (12%)
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
AWGYN +GQLG ++ P + G L V+ G HS A N
Sbjct: 53 MAWGYNGFGQLGD-VSLNNSASPVKVSG----------LVGAKGVAIGADHSLAFFNNST 101
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVV----ALDGIFIKDVACGGVHSCALTSKGAL 304
V WG GQLG+ + + + + ++ +++ + VA GG HS AL G +
Sbjct: 102 VRAWGYNGFGQLGNGTTTYSNIPVPVKTLIGTASSINLTGVTAVAAGGFHSLAL-KNGTV 160
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL-----VACGHSHTLV 359
++WG + GQLG T + LI + T PNG+ L +A G SH+L
Sbjct: 161 WSWGENTNGQLGRN-VTDTSPLIAGQVMTD--------PPNGIGLTSITRIAAGGSHSLA 211
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
G + WGYN YGQ + P + V +AAGG S +
Sbjct: 212 LDSSGAVWAWGYNGYGQLGDGSLVDKKLPVKLTGITVPVVAIAAGGAFSVAV 263
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 78/180 (43%), Gaps = 17/180 (9%)
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
HS A N WG GQLG SL + P +V L G K VA G HS A
Sbjct: 43 HSLAF-RNSTTMAWGYNGFGQLGDVSL---NNSASPVKVSGLVG--AKGVAIGADHSLAF 96
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 358
+ + AWG + GQLG G T ++S IP T + + GV VA G H+L
Sbjct: 97 FNNSTVRAWGYNGFGQLGNG--TTTYSNIPVPVKTLIGTASSINL-TGVTAVAAGGFHSL 153
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYA-------WYPSPVDWCVGEVRKLAAGGGHSAVL 411
+++G + WG N+ GQ + + P + + ++AAGG HS L
Sbjct: 154 A-LKNGTVWSWGENTNGQLGRNVTDTSPLIAGQVMTDPPNGIGLTSITRIAAGGSHSLAL 212
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 47/107 (43%), Gaps = 18/107 (16%)
Query: 5 EIIGETARPVDNIPA-------------KSAIYVWGYNHSGQTGRKGRERQLRIPKQLP- 50
+++ E P+ NI A AI+ WGYN GQ G P Q+P
Sbjct: 293 QVVLEDGTPLPNIKAIAAGLDHVLALDSNGAIWAWGYNGLGQLGNNTTINS-STPVQVPA 351
Query: 51 --PELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLG 95
L P + +A GH HT A +DGTL+ WG N +GQLG
Sbjct: 352 FTAALIDSPFTVDGVNPILAAGH-HTLARKADGTLWAWGDNAYGQLG 397
>gi|337744685|ref|YP_004638847.1| hypothetical protein KNP414_00352 [Paenibacillus mucilaginosus
KNP414]
gi|336295874|gb|AEI38977.1| hypothetical protein KNP414_00352 [Paenibacillus mucilaginosus
KNP414]
Length = 1224
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 169/375 (45%), Gaps = 68/375 (18%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I + ++ WGYN GQ G G +P ++ L G IA G HT A
Sbjct: 704 IKSDGTVWGWGYNGHGQLGT-GTSNSTSVPGKVI-NLTGMKM--------IAGGENHTVA 753
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ SDGTL TWG N +GQLGD + R P +V L + ++S G + + A+ ++D
Sbjct: 754 LRSDGTLHTWGYNGYGQLGDDSTTTRYSPVQVSTLTNW--TAVSAGENHSLAL----KSD 807
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAF----TPNTI-----ICQVSCGSVHVVALSECGL 187
GT+ W +G N + +L G TP + + ++ G +AL G
Sbjct: 808 GTV-----WAFGYN---GYGQLGDGTTSSQRTPVQVKDLTGVVAIAAGKDFSLALKSDGT 859
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ +WG N YG+LG G T + + L + ++ G+YH A+ ++G
Sbjct: 860 VWSWGQNTYGELGNGTTTR-----------SSVPVQVALLTDVKAIAAGDYHGVALKKDG 908
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF-IKDVACGGVHSCALTSKGALYA 306
V+ WG G+LG+ S + + G+ IK +A G H+ AL S G +++
Sbjct: 909 SVFAWGYNGNGELGNSS-------TISQSTPVQSGVTGIKGIAAGPYHTLALKSDGTVWS 961
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDG 364
WG + GQLG G T R++P +P + +A G + ++ Y DG
Sbjct: 962 WGYNGYGQLGSGNNTS-------------RSVP-AAIPGLASMASIAAGENQSIAYGNDG 1007
Query: 365 RIHGWGYNSYGQAAN 379
++ WG N+ GQ N
Sbjct: 1008 ILYSWGRNANGQLGN 1022
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 162/350 (46%), Gaps = 47/350 (13%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
L ++ HT + SDGT++ WG N GQLG GT P KV L +K I+ G +
Sbjct: 692 LAVSLLGNHTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVINLTG--MKMIAGGEN 749
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQN----QGSNFPRLFWGAFTPNTII--CQVSCGSVH 178
T A+ +DGT+ T WG N G + + +T+ VS G H
Sbjct: 750 HTVAL----RSDGTLHT-----WGYNGYGQLGDDSTTTRYSPVQVSTLTNWTAVSAGENH 800
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
+AL G + A+GYN YGQLG G T + P +K +L + ++ G+
Sbjct: 801 SLALKSDGTVWAFGYNGYGQLGDGTTSS-QRTPVQVK----------DLTGVVAIAAGKD 849
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
S A+ +G V++WG + G+LG+ + + +P +V L + K +A G H AL
Sbjct: 850 FSLALKSDGTVWSWGQNTYGELGNGTTT---RSSVPVQVALLTDV--KAIAAGDYHGVAL 904
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 358
G+++AWG + G+LG S T ++ P+ G++ +A G HTL
Sbjct: 905 KKDGSVFAWGYNGNGELG-------------NSSTISQSTPVQSGVTGIKGIAAGPYHTL 951
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
DG + WGYN YGQ + +T P+ + + + +AAG S
Sbjct: 952 ALKSDGTVWSWGYNGYGQLGSGNNTSRSVPAAIP-GLASMASIAAGENQS 1000
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 142/305 (46%), Gaps = 50/305 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WGYN GQ G + P Q+ + W ++ G H+ A+ SDGT
Sbjct: 760 LHTWGYNGYGQLGDDSTTTRYS-PVQVSTL---------TNWTAVSAGENHSLALKSDGT 809
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ +G N +GQLGDGT ++ P +VK L V +I+ G + A+ ++DGT+
Sbjct: 810 VWAFGYNGYGQLGDGTTSSQRTPVQVKDLTG--VVAIAAGKDFSLAL----KSDGTV--- 860
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQV---------SCGSVHVVALSECGLLQAWGY 193
W WGQN + L G T +++ QV + G H VAL + G + AWGY
Sbjct: 861 --WSWGQN---TYGELGNGTTTRSSVPVQVALLTDVKAIAAGDYHGVALKKDGSVFAWGY 915
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
N G+LG T Q V G + I ++ G YH+ A+ +G V++WG
Sbjct: 916 NGNGELGNSSTIS--QSTPVQSG----------VTGIKGIAAGPYHTLALKSDGTVWSWG 963
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
GQLG + S +P + L + +A G S A + G LY+WG + G
Sbjct: 964 YNGYGQLGSGNNTS---RSVPAAIPGLAS--MASIAAGENQSIAYGNDGILYSWGRNANG 1018
Query: 314 QLGLG 318
QLG G
Sbjct: 1019 QLGNG 1023
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 92/230 (40%), Gaps = 58/230 (25%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ +GYN GQ G G R P Q+ +L G A IA G + + A+ SDGT
Sbjct: 810 VWAFGYNGYGQLG-DGTTSSQRTPVQVK-DLTGVVA--------IAAGKDFSLALKSDGT 859
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE-------- 134
+++WG N +G+LG+GT P +V L VK+I+ G + A+ +
Sbjct: 860 VWSWGQNTYGELGNGTTTRSSVPVQVALLTD--VKAIAAGDYHGVALKKDGSVFAWGYNG 917
Query: 135 -----NDGTISTSR---------------------------LWVWGQN------QGSNFP 156
N TIS S +W WG N G+N
Sbjct: 918 NGELGNSSTISQSTPVQSGVTGIKGIAAGPYHTLALKSDGTVWSWGYNGYGQLGSGNNTS 977
Query: 157 RLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCE 206
R A + ++ G +A G+L +WG N GQLG G T +
Sbjct: 978 RSVPAAIPGLASMASIAAGENQSIAYGNDGILYSWGRNANGQLGNGTTVD 1027
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 63/124 (50%), Gaps = 13/124 (10%)
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
V+ G H+ + S G ++ WG + GQLG G T + + +P + ++ G+
Sbjct: 694 VSLLGNHTMFIKSDGTVWGWGYNGHGQLGTG--TSNSTSVPGK----------VINLTGM 741
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH 407
+++A G +HT+ DG +H WGYN YGQ ++ +T + P V + ++AG H
Sbjct: 742 KMIAGGENHTVALRSDGTLHTWGYNGYGQLGDDSTTTRYSPVQVS-TLTNWTAVSAGENH 800
Query: 408 SAVL 411
S L
Sbjct: 801 SLAL 804
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 50/108 (46%), Gaps = 12/108 (11%)
Query: 3 INEIIGETARPVDNIPAKS--AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA 60
+ I G A P + KS ++ WGYN GQ G G +P +P G + A
Sbjct: 937 VTGIKGIAAGPYHTLALKSDGTVWSWGYNGYGQLG-SGNNTSRSVPAAIP----GLASMA 991
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
+ IA G + A +DG L++WG N GQLG+GT P KV
Sbjct: 992 S-----IAAGENQSIAYGNDGILYSWGRNANGQLGNGTTVDTNVPHKV 1034
>gi|195170687|ref|XP_002026143.1| GL16177 [Drosophila persimilis]
gi|194111023|gb|EDW33066.1| GL16177 [Drosophila persimilis]
Length = 1052
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 186/421 (44%), Gaps = 72/421 (17%)
Query: 22 AIYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
A+Y WG GQ G G E Q+ +P Q+ + +S IACGH HT + ++
Sbjct: 2 ALYCWGDASHGQLGLGGIENEQILLPSQIEFK-------PDSPVQQIACGHRHTLFLTAN 54
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G ++ G N+ QLG E K P + +LQ+ V I+CG+ + A+ E
Sbjct: 55 GQVYACGNNDHHQLGH--ELPTKRPLPIPELQAYVVIQIACGSRHSMALTE--------- 103
Query: 141 TSRLWVWGQNQGSN-----------FPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQ 189
++ WG N P++ F + + Q++CG+ H +AL+ CG L
Sbjct: 104 WGQILSWGDNDCGQVGHSTDNDVIELPKIL--RFLVSRTVVQIACGNNHSLALTSCGELY 161
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL-EKITQVSCGEYHSAAVSENGE 248
+WG N YGQL G+Q P+ + L L + ++CG HS +S++
Sbjct: 162 SWGSNIYGQL-------GVQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSA 214
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
V+ WG + GQLG L P ++ ++ + ++ V CG +S LT++G ++ G
Sbjct: 215 VFGWGKNTCGQLG---LNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCG 271
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD-GRIH 367
GQLG G +IP + I ++ + + VACG+ HTL + GR++
Sbjct: 272 AGNYGQLGHGVSNN--EMIP--------RMVIELMGSTITQVACGNRHTLALVPSGGRVY 321
Query: 368 GWGYNSYGQAANEKSTYAWYP--------SPVDWCVGE----------VRKLAAGGGHSA 409
+G + GQ + P SP + E +RK+ +GG S
Sbjct: 322 SFGLGASGQLGTRNTISQTLPKVVIGPWVSPSGSALMESSEGADKSVVIRKIFSGGDQSI 381
Query: 410 V 410
V
Sbjct: 382 V 382
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 157/340 (46%), Gaps = 38/340 (11%)
Query: 83 LFTWGANEFGQLGDGTEEGRK--HPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
L+ WG GQLG G E + P +++ V+ I+CG T + +
Sbjct: 3 LYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLT---------A 53
Query: 141 TSRLWVWGQNQ----GSNFP--RLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
+++ G N G P R ++ Q++CGS H +AL+E G + +WG N
Sbjct: 54 NGQVYACGNNDHHQLGHELPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDN 113
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+ GQ+G + ++ P++++ + Q++CG HS A++ GE+Y+WG
Sbjct: 114 DCGQVGHSTDNDVIELPKILRFLVS--------RTVVQIACGNNHSLALTSCGELYSWGS 165
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG S + P R+ + GI + +ACGG HS ++ A++ WG + GQ
Sbjct: 166 NIYGQLGVQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQ 225
Query: 315 LGLG-PQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNS 373
LGL Q R++ P++ + R + GV+ V CG +++ +G + G +
Sbjct: 226 LGLNDEQNRAY---PSQLKS-MRTL-------GVRFVTCGDEYSVFLTNEGGVFTCGAGN 274
Query: 374 YGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
YGQ + S P V +G + ++A G H+ L
Sbjct: 275 YGQLGHGVSNNEMIPRMVIELMGSTITQVACGNRHTLALV 314
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 142/314 (45%), Gaps = 46/314 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLP-PELFGCPAGANSRWLDIACGHEHTA 75
+ A +Y G N Q G +L + LP PEL + IACG H+
Sbjct: 51 LTANGQVYACGNNDHHQLGH-----ELPTKRPLPIPELQAYVV------IQIACGSRHSM 99
Query: 76 AVASDGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
A+ G + +WG N+ GQ+G T+ + + P+ ++ L S V I+CG + + A+
Sbjct: 100 ALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALT---- 155
Query: 135 NDGTISTSRLWVWGQN----QGSNFPRLFWGAFTP---NTI----ICQVSCGSVHVVALS 183
S L+ WG N G P+ + P TI + ++CG H +S
Sbjct: 156 -----SCGELYSWGSNIYGQLGVQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLIS 210
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ + WG N GQLG + Y L L + V+CG+ +S +
Sbjct: 211 KSSAVFGWGKNTCGQLGLNDEQN--------RAYPSQLKSMRTL-GVRFVTCGDEYSVFL 261
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKG 302
+ G V+T G G+ GQLGH + E++PR V+ L G I VACG H+ AL S G
Sbjct: 262 TNEGGVFTCGAGNYGQLGHG---VSNNEMIPRMVIELMGSTITQVACGNRHTLALVPSGG 318
Query: 303 ALYAWGGSQAGQLG 316
+Y++G +GQLG
Sbjct: 319 RVYSFGLGASGQLG 332
>gi|171847108|gb|AAI62028.1| Rpgr protein [Rattus norvegicus]
Length = 677
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 114/362 (31%), Positives = 172/362 (47%), Gaps = 52/362 (14%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++CG EHTA V + L+ +G+N +GQLG G++ P +K L+ E VK +CG
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEKVKLAACG---- 133
Query: 127 AAIAEPRENDGTISTSRLWVW---GQNQG----------SNFPRLFWGAFTPNTIICQVS 173
N +ST V+ G N+G F ++ G FTP+ II Q+S
Sbjct: 134 -------RNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQI--GFFTPSDIIKQLS 184
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
G+ AL+E G L WG N GQ+G V G + I+ +
Sbjct: 185 AGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTVG-----------KPISWI 233
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
SCG YHSA V+ +GE+YT+G G+LG + Q P+RV+ + I+ VACGG
Sbjct: 234 SCGYYHSAFVTTDGELYTFGEPENGKLGLPN-QLLINHRSPQRVLGIPDKVIQ-VACGGG 291
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG 353
H+ LT K +YA+G Q GQLGLG +F +E R + + ++CG
Sbjct: 292 HTVVLTEK-VVYAFGLGQFGQLGLG----TFLFETSEPKIIDR-----IKDQKISHISCG 341
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQ--AANEKSTYAWYPSPV-DWCVGEVRKLAAGGGHSAV 410
+HT + G ++ +G +G+ E T ++P+ ++ V+ +A GG H V
Sbjct: 342 ENHTALMTDIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLKFTVQLIACGGCHMLV 401
Query: 411 LA 412
A
Sbjct: 402 FA 403
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 125/276 (45%), Gaps = 29/276 (10%)
Query: 141 TSRLWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
T ++ +G+ + N P FW F + IC +SCG H ++ L +G N +GQL
Sbjct: 49 TGAVFTFGKTKFAENIPSKFW--FKNDVPIC-LSCGDEHTAIVTGNNKLYMFGSNNWGQL 105
Query: 200 GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ 259
G G + + P IK A + EK+ +CG H+ ++ G VY G + GQ
Sbjct: 106 GLG-SKSAISKPTCIK--------ALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQ 156
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LG + D++ + IK ++ G S ALT G L+ WG + GQ+GL
Sbjct: 157 LGLG--DTDDRDTFHQIGFFTPSDIIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGL-- 212
Query: 320 QTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAAN 379
+ +S IP+E + V + ++CG+ H+ DG ++ +G G+
Sbjct: 213 KNKSNVCIPHE----------VTVGKPISWISCGYYHSAFVTTDGELYTFGEPENGKLGL 262
Query: 380 EKSTYAWYPSP--VDWCVGEVRKLAAGGGHSAVLAD 413
+ SP V +V ++A GGGH+ VL +
Sbjct: 263 PNQLLINHRSPQRVLGIPDKVIQVACGGGHTVVLTE 298
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 90/195 (46%), Gaps = 38/195 (19%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+++WG N GQ G K + + IP ++ G W I+CG+ H+A V +DG
Sbjct: 199 LFMWGDNSEGQIGLKNK-SNVCIPHEV-------TVGKPISW--ISCGYYHSAFVTTDGE 248
Query: 83 LFTWGANEFGQLGDGTEEGRKH--PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
L+T+G E G+LG + H P++V + + ++ ++CG T + E
Sbjct: 249 LYTFGEPENGKLGLPNQLLINHRSPQRVLGIPDKVIQ-VACGGGHTVVLTE--------- 298
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFT-----PNTI-------ICQVSCGSVHVVALSECGLL 188
++ +G Q F +L G F P I I +SCG H +++ GL+
Sbjct: 299 -KVVYAFGLGQ---FGQLGLGTFLFETSEPKIIDRIKDQKISHISCGENHTALMTDIGLM 354
Query: 189 QAWGYNEYGQLGRGI 203
+G +G+LG G+
Sbjct: 355 YTFGDGRHGKLGLGM 369
>gi|148654597|ref|YP_001274802.1| regulator of chromosome condensation, RCC1 [Roseiflexus sp. RS-1]
gi|148566707|gb|ABQ88852.1| regulator of chromosome condensation, RCC1 [Roseiflexus sp. RS-1]
Length = 837
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 127/407 (31%), Positives = 169/407 (41%), Gaps = 66/407 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+ WG N SGQ G ER+L P + G +G+ + +A G HT A+ GT
Sbjct: 347 VQCWGLNSSGQLGDGTTERRLT-----PVSVSGL-SGSTA----LAAGGVHTCALLQTGT 396
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ WG NEFGQLGDGT E R P V L TA A R + T
Sbjct: 397 VQCWGRNEFGQLGDGTTERRLTPVVVSGLSGA-----------TALTAGDRHTCAVLQTR 445
Query: 143 RLWVWGQNQ------GSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECGLLQAW 191
WG+N G+ RL TP T+ ++ G H AL Q W
Sbjct: 446 TAQCWGENSPGQLGDGTTERRL-----TPVTVSGLSGATSLAAGDGHTCALMNVRTAQCW 500
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G N GQLG G T L P + G L T ++ G+ H+ A+ + V
Sbjct: 501 GRNSSGQLGDGTTERRLT-PVTVSG----------LSAATALAAGDSHTCALLDTRRVRC 549
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG S GQLG + + P V L G +A G H+C L G + WG +
Sbjct: 550 WGRNSSGQLGDGTRT---DRVTPVAVSGLSG--ATALAAGNSHTCTLLDTGTVQCWGWNS 604
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGY 371
+GQLG G TR+ + P +GV +A G +HT M G + WG
Sbjct: 605 SGQLGDG--TRTDRVTPAAVSGL----------SGVTALAAGANHTCALMDSGTVQCWGR 652
Query: 372 NSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSLK 418
NS GQ + T P+ V G V LAAG H+ L D+ +++
Sbjct: 653 NSSGQLGDGTRTDRVTPAAVSGLSG-VTALAAGANHTCALMDSGTVQ 698
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 124/403 (30%), Positives = 171/403 (42%), Gaps = 58/403 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+ WG N +GQ G R +L P +GA + +A G EHT A+ GT
Sbjct: 247 VQCWGGNGAGQLGDGTRT------SRLTPMAVSGLSGATA----LAAGFEHTCALLDTGT 296
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ WG N GQLGDGT E R P V L V +++ G T A+ + T
Sbjct: 297 VRCWGLNSSGQLGDGTTERRLTPVAVSGLSG--VTALAAGDFHTCAV---------LQTE 345
Query: 143 RLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
+ WG N G+ RL + + + ++ G VH AL + G +Q WG NE+
Sbjct: 346 TVQCWGLNSSGQLGDGTTERRLTPVSVSGLSGSTALAAGGVHTCALLQTGTVQCWGRNEF 405
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG G T L P V+ G L T ++ G+ H+ AV + WG S
Sbjct: 406 GQLGDGTTERRLT-PVVVSG----------LSGATALTAGDRHTCAVLQTRTAQCWGENS 454
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
GQLG + + + L P V L G +A G H+CAL + WG + +GQLG
Sbjct: 455 PGQLGDGTTE---RRLTPVTVSGLSG--ATSLAAGDGHTCALMNVRTAQCWGRNSSGQLG 509
Query: 317 LGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
G R R P+ V + +A G SHT + R+ WG NS G
Sbjct: 510 DGTTER-------------RLTPVTVSGLSAATALAAGDSHTCALLDTRRVRCWGRNSSG 556
Query: 376 QAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSLK 418
Q + T P V G LAAG H+ L D +++
Sbjct: 557 QLGDGTRTDRVTPVAVSGLSGAT-ALAAGNSHTCTLLDTGTVQ 598
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 120/394 (30%), Positives = 170/394 (43%), Gaps = 59/394 (14%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFT 85
WG N GQ G ER+L P +GA S +A G HT A+ + T
Sbjct: 450 WGENSPGQLGDGTTERRL------TPVTVSGLSGATS----LAAGDGHTCALMNVRTAQC 499
Query: 86 WGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLW 145
WG N GQLGDGT E R P V L + +++ G T A+ + R R+
Sbjct: 500 WGRNSSGQLGDGTTERRLTPVTVSGLSAA--TALAAGDSHTCALLDTR---------RVR 548
Query: 146 VWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
WG+N G+ R+ A + + ++ G+ H L + G +Q WG+N GQL
Sbjct: 549 CWGRNSSGQLGDGTRTDRVTPVAVSGLSGATALAAGNSHTCTLLDTGTVQCWGWNSSGQL 608
Query: 200 GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ 259
G G + + P + G L +T ++ G H+ A+ ++G V WG S GQ
Sbjct: 609 GDGTRTDRVT-PAAVSG----------LSGVTALAAGANHTCALMDSGTVQCWGRNSSGQ 657
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LG + + P V L G+ +A G H+CAL G + WG + +GQLG G
Sbjct: 658 LGDGTRT---DRVTPAAVSGLSGV--TALAAGANHTCALMDSGTVQCWGRNSSGQLGDGT 712
Query: 320 QTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
T R P V +GV + G +HT M G + WG N +GQ
Sbjct: 713 TTD-------------RVTPAAVSGLSGVTALVAGANHTCALMPTGTVQCWGKNEFGQLG 759
Query: 379 NEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVL 411
+ +T P V G + LAAG H+ AVL
Sbjct: 760 DGTTTDRLTPVAVSGLSG-ITALAAGSEHTCAVL 792
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 122/408 (29%), Positives = 172/408 (42%), Gaps = 58/408 (14%)
Query: 14 VDNIPAKSAIYVW-GYNHS--GQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACG 70
+D P K Y++ G H+ TG +GR + P + P SR + +A G
Sbjct: 32 IDKRPVKLDRYLYPGVAHTWIDSTGSEGR--LMTNPGKAPASPL-----PLSRVIALAAG 84
Query: 71 HEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIA 130
HT A+ + GT++ WG N GQLGDGT R P V L V +++ G + T A+
Sbjct: 85 RYHTCALLNTGTVWCWGWNGSGQLGDGTTTDRAMPVAVSGLSG--VTALAAGRYHTCALL 142
Query: 131 EPRENDGTISTSRLWVWGQNQGSNF------PRLFWGAFTPNTIICQVSCGSVHVVALSE 184
N GT+ WG N R+ A + + + ++ G H AL +
Sbjct: 143 ----NTGTVQ-----CWGLNSSGQLGDWTITNRVTPVAVSGLSGVIALAAGDRHTCALLD 193
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
++ WG NE+GQLG G T + P + G L +T ++ G H+ A
Sbjct: 194 TRTVRCWGENEHGQLGDGTTNDRWT-PVAVSG----------LSGVTALAAGGRHTCAAL 242
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
G V WG GQLG + S L P V L G +A G H+CAL G +
Sbjct: 243 NTGTVQCWGGNGAGQLGDGTRTS---RLTPMAVSGLSG--ATALAAGFEHTCALLDTGTV 297
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRD 363
WG + +GQLG G R R P+ V +GV +A G HT ++
Sbjct: 298 RCWGLNSSGQLGDGTTER-------------RLTPVAVSGLSGVTALAAGDFHTCAVLQT 344
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
+ WG NS GQ + + P V G LAAGG H+ L
Sbjct: 345 ETVQCWGLNSSGQLGDGTTERRLTPVSVSGLSGST-ALAAGGVHTCAL 391
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 149/373 (39%), Gaps = 57/373 (15%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFT 85
WG N SGQ G ER+L P + G A +A G HT A+ +
Sbjct: 500 WGRNSSGQLGDGTTERRLT-----PVTVSGLSAATA-----LAAGDSHTCALLDTRRVRC 549
Query: 86 WGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLW 145
WG N GQLGDGT R P V L + CT + T +
Sbjct: 550 WGRNSSGQLGDGTRTDRVTPVAVSGLSGATALAAGNSHTCTL-----------LDTGTVQ 598
Query: 146 VWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
WG N G+ R+ A + + + ++ G+ H AL + G +Q WG N GQL
Sbjct: 599 CWGWNSSGQLGDGTRTDRVTPAAVSGLSGVTALAAGANHTCALMDSGTVQCWGRNSSGQL 658
Query: 200 GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ 259
G G + + P + G L +T ++ G H+ A+ ++G V WG S GQ
Sbjct: 659 GDGTRTDRVT-PAAVSG----------LSGVTALAAGANHTCALMDSGTVQCWGRNSSGQ 707
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LG + + P V L G+ + G H+CAL G + WG ++ GQLG G
Sbjct: 708 LGDGTTT---DRVTPAAVSGLSGV--TALVAGANHTCALMPTGTVQCWGKNEFGQLGDGT 762
Query: 320 QTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
T R P+ V +G+ +A G HT + G WG N +G+
Sbjct: 763 TTD-------------RLTPVAVSGLSGITALAAGSEHTCAVLNTGAARCWGRNLFGRLG 809
Query: 379 NEKSTYAWYPSPV 391
Y+ P V
Sbjct: 810 ISPLDYSPLPRTV 822
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 148/333 (44%), Gaps = 53/333 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+ WG N SGQ G R ++ P +GA + +A G+ HT + GT
Sbjct: 547 VRCWGRNSSGQLGDGTRT------DRVTPVAVSGLSGATA----LAAGNSHTCTLLDTGT 596
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ WG N GQLGDGT R P V L V +++ GA+ T A+ + GT+
Sbjct: 597 VQCWGWNSSGQLGDGTRTDRVTPAAVSGLSG--VTALAAGANHTCALMD----SGTVQ-- 648
Query: 143 RLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
WG+N G+ R+ A + + + ++ G+ H AL + G +Q WG N
Sbjct: 649 ---CWGRNSSGQLGDGTRTDRVTPAAVSGLSGVTALAAGANHTCALMDSGTVQCWGRNSS 705
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG G T + + P + G L +T + G H+ A+ G V WG
Sbjct: 706 GQLGDGTTTDRVT-PAAVSG----------LSGVTALVAGANHTCALMPTGTVQCWGKNE 754
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
GQLG + L P V L GI +A G H+CA+ + GA WG + G+LG
Sbjct: 755 FGQLGDGTTT---DRLTPVAVSGLSGI--TALAAGSEHTCAVLNTGAARCWGRNLFGRLG 809
Query: 317 LGPQT-----RSFSLIPNESDTYFRNIPILVVP 344
+ P R+ +IP++ F IP++ P
Sbjct: 810 ISPLDYSPLPRTVVIIPHQ---VF--IPVVYRP 837
>gi|115374127|ref|ZP_01461415.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|115368903|gb|EAU67850.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 479
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 119/390 (30%), Positives = 181/390 (46%), Gaps = 62/390 (15%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A ++ G N +GQ G G P+ +P SR + +A G H A+
Sbjct: 137 ADGTVWACGSNSAGQLG-NGTTAARSAPRPVP---------GLSRAVAVAAGGSHALALC 186
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
+DGT++ WG N +GQLG+G+ R P +V LQ V +++ G + A+ DGT
Sbjct: 187 ADGTVWAWGNNGYGQLGNGSTAHRATPVQVPGLQG--VVAVAGGYMHSLALCA----DGT 240
Query: 139 ISTSRLWVWGQNQGSNFPRLFWGAF----TPNTI-----ICQVSCGSVHVVALSECGLLQ 189
+ W WG N ++ +L G TP + + V+ G H +AL G +
Sbjct: 241 V-----WAWGFN---DYGQLGNGTTVHSPTPVPVPGLSQVVSVAAGGFHSLALCADGTVW 292
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
AWG N +GQLG ++ + + P ++G L ++ V+ G YHS AV G +
Sbjct: 293 AWGNNGFGQLGEAVSTQRTK-PGRVEG----------LREVVAVAGGFYHSLAVRAGGSL 341
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
++WG GQLG+ S S + P V L + VA GG+HS A+ + G ++AWG
Sbjct: 342 WSWGNNYSGQLGNGSFSSSAR---PAPVQGLGA--VTSVAAGGMHSVAVQADGTVWAWGR 396
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGW 369
++ GQLG R+ E T R +P L G VA G H+L G + W
Sbjct: 397 NEEGQLG---HERA-----PERATPVR-VPGL---QGEVAVAAGFYHSLSVQAGGSLWAW 444
Query: 370 GYNSYGQAANEKSTYAWYPSPVDWCVGEVR 399
G N +GQ + ++ P+P W G+ R
Sbjct: 445 GLNDFGQLGDSEAPLMPVPAP-GWAQGKAR 473
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 119/362 (32%), Positives = 169/362 (46%), Gaps = 56/362 (15%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+A G++++ A+ +DGT++ G+N GQLG+GT R P V L S V + G+H
Sbjct: 125 VAGGYQYSLALHADGTVWACGSNSAGQLGNGTTAARSAPRPVPGL-SRAVAVAAGGSHAL 183
Query: 127 AAIAEPRENDGTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTI-----ICQVSCG 175
A A DGT+ W WG N GS R TP + + V+ G
Sbjct: 184 ALCA-----DGTV-----WAWGNNGYGQLGNGSTAHRA-----TPVQVPGLQGVVAVAGG 228
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
+H +AL G + AWG+N+YGQLG G T + P + P L ++ V+
Sbjct: 229 YMHSLALCADGTVWAWGFNDYGQLGNGTT---VHSPTPV--------PVPGLSQVVSVAA 277
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
G +HS A+ +G V+ WG GQLG K P RV L + VA G HS
Sbjct: 278 GGFHSLALCADGTVWAWGNNGFGQLGEAVSTQRTK---PGRVEGLREVVA--VAGGFYHS 332
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS 355
A+ + G+L++WG + +GQLG G SFS + R P+ + V VA G
Sbjct: 333 LAVRAGGSLWSWGNNYSGQLGNG----SFS-------SSARPAPVQGL-GAVTSVAAGGM 380
Query: 356 HTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADAC 415
H++ DG + WG N GQ +E++ P V GEV +AAG HS +
Sbjct: 381 HSVAVQADGTVWAWGRNEEGQLGHERAPERATPVRVPGLQGEV-AVAAGFYHSLSVQAGG 439
Query: 416 SL 417
SL
Sbjct: 440 SL 441
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 91/190 (47%), Gaps = 20/190 (10%)
Query: 223 EAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG 282
+A + + V+ G +S A+ +G V+ G S GQLG+ + + PR V L
Sbjct: 115 QAADQRGVRAVAGGYQYSLALHADGTVWACGSNSAGQLGNGTTAA---RSAPRPVPGLSR 171
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
VA GG H+ AL + G ++AWG + GQLG G T R P+ V
Sbjct: 172 AVA--VAAGGSHALALCADGTVWAWGNNGYGQLGNG-------------STAHRATPVQV 216
Query: 343 VP-NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL 401
GV VA G+ H+L DG + WG+N YGQ N + ++ P PV + +V +
Sbjct: 217 PGLQGVVAVAGGYMHSLALCADGTVWAWGFNDYGQLGNGTTVHSPTPVPVP-GLSQVVSV 275
Query: 402 AAGGGHSAVL 411
AAGG HS L
Sbjct: 276 AAGGFHSLAL 285
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 61/134 (45%), Gaps = 21/134 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +++ WG N+SGQ G R P + G A + +A G H+ A
Sbjct: 335 VRAGGSLWSWGNNYSGQLGNGSFSSSAR-----PAPVQGLGAVTS-----VAAGGMHSVA 384
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V +DGT++ WG NE GQLG R P +V LQ E +++ G + + ++
Sbjct: 385 VQADGTVWAWGRNEEGQLGHERAPERATPVRVPGLQGEV--AVAAGFYHSLSVQ------ 436
Query: 137 GTISTSRLWVWGQN 150
+ LW WG N
Sbjct: 437 ---AGGSLWAWGLN 447
>gi|159039901|ref|YP_001539154.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
gi|157918736|gb|ABW00164.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
Length = 556
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 131/464 (28%), Positives = 186/464 (40%), Gaps = 64/464 (13%)
Query: 13 PVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHE 72
P I A + WG N GQ G P +++ PAG + + G
Sbjct: 48 PSAAIRASDTYFAWGDNSDGQLGNGTTTG-----SSTPVDVY-LPAG--TTITAVTAGGL 99
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
H+ A+ S G + WG N GQLG+G R P V + +I+ GA + A+
Sbjct: 100 HSLALTSTGAVLAWGRNFSGQLGNGDTTNRSTPVDVDLPAGTTITAIAAGAFHSLAL--- 156
Query: 133 RENDGTISTSRLWVWGQNQ--------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
S + WG+N +N + I V+ G+ H +A++
Sbjct: 157 ------TSAGTVLAWGENLHGQLGNGGTTNMSTPVGVSLPAGVTITAVAAGAFHSLAVTS 210
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G + AWG N GQLG G T G P + L + + G HS A++
Sbjct: 211 TGAVLAWGDNSNGQLGNG-TTTGSSTPVDVD-----LPAGTTITAVAAGVAGAAHSLALT 264
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGD--KELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
G WG + GQLG+ GD P V G+ I VA GG+HS ALT+ G
Sbjct: 265 STGAALAWGNNADGQLGN-----GDTTNRSTPVDVDLPAGVTITAVAAGGLHSLALTAAG 319
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG--VQLVACGHSHTLVY 360
A+ AWG + +GQLG G T S + P + D +P G + +A G L
Sbjct: 320 AVVAWGRNVSGQLGNGTTTGSST--PVDVD----------LPTGATINAIAAGFDFGLAL 367
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLADACSLK 418
G + WG N GQ N + P VD G + +AAGG HS A++A S
Sbjct: 368 TTAGAVVAWGRNVSGQLGNGDTINRSTPVDVDLPAGVTITAVAAGGQHSMALVALPTSTT 427
Query: 419 EL----------CEFRLAESVTLSNASEIEDVASRTGSEALARL 452
L + L +VT + + + RT E LA +
Sbjct: 428 TLQVMPRKPRADQDVTLTATVTCNVDTPTGTITFRTNGETLATV 471
>gi|384251643|gb|EIE25120.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
Length = 567
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 192/453 (42%), Gaps = 74/453 (16%)
Query: 14 VDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEH 73
V P ++ ++ WG N GQ E + PK L L G + + CG
Sbjct: 42 VQKPPIEAVVFGWGVNEDGQLALDEAE-NVMAPKVLEALLGTRFQGRDFLKSPLVCGSRC 100
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEP 132
T A+ +DG + +WG N+ LG E + P +V L+ + +S G HC A
Sbjct: 101 TVAIDADGQVLSWGWNDRATLGHSHREHERKPRRVAALRGMEITQVSTGGWHCLA----- 155
Query: 133 RENDGTISTSRLWVWGQNQGSNFPRLFWGAF--------TPNTIICQVSCGSVHVVALSE 184
S ++ WG N+ + W P + QV+ G +H L++
Sbjct: 156 -----LDSAGLVYAWGGNEYGQC-NVEWNVRDVVQPTPCVPGLRVKQVAAGGMHSCVLTD 209
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G + WG +G + + P+ ++G I +++CG +H+ A++
Sbjct: 210 TGEVWTWG-EPWGDFSMKVD----RHPKKVEGAI----------DIVKLACGAFHNLALN 254
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA- 303
GEV WG+ GQLG+ S E P +V+ L+ + + D+ GG HS ALT++G
Sbjct: 255 AAGEVLAWGINDFGQLGNGSTF---YETSPTKVLGLEDVRVADIVAGGWHSLALTTEGGA 311
Query: 304 ------------LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVA 351
++ WG + G+LGLG ++ S L + F+ P+ +
Sbjct: 312 HPQIECAKAGKMVFVWGRGEYGRLGLGDRSGSSKL--RATGVAFKE------PD----AS 359
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG------EVRKLAAGG 405
CG +HT+V +GRI+ WG S+G+ T Y SPV+ + V A+GG
Sbjct: 360 CGGTHTMVLTSEGRIYTWGRGSFGRLGT--GTEKDYLSPVEVFLPGGPERWRVICCASGG 417
Query: 406 GHSAVLA--DACSLKELCEFRLAESVTLSNASE 436
HS VLA D R+A L +SE
Sbjct: 418 RHSLVLALPDNSDSDRTARMRIAAGPALGGSSE 450
>gi|301755558|ref|XP_002913646.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC6-like [Ailuropoda melanoleuca]
Length = 1189
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/354 (30%), Positives = 149/354 (42%), Gaps = 78/354 (22%)
Query: 58 AGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVK 117
AGA R A G H+ + S+G L + G N GQLG + +HP++++ L
Sbjct: 21 AGAELR--QAASGERHSLLLLSNGELHSCGDNSQGQLGRKGVQRDEHPKRIRTLD----- 73
Query: 118 SISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSV 177
N + VSCG
Sbjct: 74 ------------------------------------------------NLRVDLVSCGKE 85
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H +A+ G + AWG GQLG G E P IK KI QVSCG
Sbjct: 86 HSLAVCYKGRVFAWGAGSEGQLGVGEFKEINLIPTKIKTLTGI--------KIIQVSCGH 137
Query: 238 YHSAAVSENGEVYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVH 294
YHS A+SE G+V++WG S GQLG C Q+ P+RV +LDGI + VA GG H
Sbjct: 138 YHSLALSEGGQVFSWGSNSHGQLGLGKECPSQAS-----PQRVRSLDGIPLTQVAAGGAH 192
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGH 354
S AL+ GA + WG + AGQL L S +N+ GV ++CG+
Sbjct: 193 SFALSLSGASFGWGSNNAGQLALRQNNVPVQSHKPRSIGALKNL-------GVIYISCGY 245
Query: 355 SHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
HT V + G++ +G NSYGQ + + P V+ G V ++ G H+
Sbjct: 246 EHTAVLTQTGKVFTFGGNSYGQLGHSPTAEKEGPQLVEGIDGLVSQIDCGSYHT 299
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 139/313 (44%), Gaps = 56/313 (17%)
Query: 27 GYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTW 86
G N GQ GRKG +R PK++ N R ++CG EH+ AV G +F W
Sbjct: 48 GDNSQGQLGRKGVQRDEH-PKRI-------RTLDNLRVDLVSCGKEHSLAVCYKGRVFAW 99
Query: 87 GANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLW 145
GA GQLG G +E P K+K L + +SCG + + A++E +++
Sbjct: 100 GAGSEGQLGVGEFKEINLIPTKIKTLTGIKIIQVSCGHYHSLALSE---------GGQVF 150
Query: 146 VWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWG 192
WG N G P +P + + QV+ G H ALS G WG
Sbjct: 151 SWGSNSHGQLGLGKECP----SQASPQRVRSLDGIPLTQVAAGGAHSFALSLSGASFGWG 206
Query: 193 YNEYGQLGRGITCEGLQG--PRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
N GQL +Q PR I G K L + +SCG H+A +++ G+V+
Sbjct: 207 SNNAGQLALRQNNVPVQSHKPRSI-GALKNLG-------VIYISCGYEHTAVLTQTGKVF 258
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
T+G S GQLGH + +KE P+ V +DG+ + + CG H+ A Y +
Sbjct: 259 TFGGNSYGQLGHSP--TAEKE-GPQLVEGIDGL-VSQIDCGSYHTLA-------YVYTTG 307
Query: 311 QAGQLGLGPQTRS 323
+ G GP +S
Sbjct: 308 KVVSFGRGPSCKS 320
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 99/188 (52%), Gaps = 18/188 (9%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
++ Q + GE HS + NGE+++ G S GQLG +Q + P+R+ LD + + V
Sbjct: 24 ELRQAASGERHSLLLLSNGELHSCGDNSQGQLGRKGVQRDEH---PKRIRTLDNLRVDLV 80
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
+CG HS A+ KG ++AWG GQLG+G + + +LIP + T G++
Sbjct: 81 SCGKEHSLAVCYKGRVFAWGAGSEGQLGVG-EFKEINLIPTKIKTL----------TGIK 129
Query: 349 L--VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAG 404
+ V+CGH H+L G++ WG NS+GQ K + P V G + ++AAG
Sbjct: 130 IIQVSCGHYHSLALSEGGQVFSWGSNSHGQLGLGKECPSQASPQRVRSLDGIPLTQVAAG 189
Query: 405 GGHSAVLA 412
G HS L+
Sbjct: 190 GAHSFALS 197
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 60/141 (42%), Gaps = 12/141 (8%)
Query: 275 RRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTY 334
RR G ++ A G HS L S G L++ G + GQLG R +E
Sbjct: 15 RRQAGXAGAELRQAASGERHSLLLLSNGELHSCGDNSQGQLGRKGVQR------DEHPKR 68
Query: 335 FRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ-AANEKSTYAWYPSPVDW 393
R + L V LV+CG H+L GR+ WG S GQ E P+ +
Sbjct: 69 IRTLDNL----RVDLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGVGEFKEINLIPTKIKT 124
Query: 394 CVG-EVRKLAAGGGHSAVLAD 413
G ++ +++ G HS L++
Sbjct: 125 LTGIKIIQVSCGHYHSLALSE 145
>gi|47216552|emb|CAG04730.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1036
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 158/374 (42%), Gaps = 83/374 (22%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ C R D+ CG +HT + DGT++
Sbjct: 4 WGNASYGQLGLGGIDEEIVVEPRK-------CEFFHGKRVCDVGCGLKHTVFLLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRL 144
T G N+ GQLG E+ RK PE V L ++
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEHVVALDAQ------------------------------ 84
Query: 145 WVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGIT 204
II VSCG H +AL++ G + +WG GQLG
Sbjct: 85 -----------------------IIVAVSCGESHTLALNDKGQVFSWGLGSNGQLGLNNF 121
Query: 205 CEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCS 264
E ++ PR IK + +I QV+CG +HS A+S+ G+V++WG GQLG
Sbjct: 122 EECVRVPRNIKCLSDV--------QIAQVACGYWHSHALSKGGQVFSWGQNQFGQLGLG- 172
Query: 265 LQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSF 324
G P+ + +L GI ++ GG HS A+T GA++ WG ++ GQLGL
Sbjct: 173 -MHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGKNKFGQLGLN------ 225
Query: 325 SLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTY 384
+ D +F + + V V+CG HT + + +G YGQ + + +
Sbjct: 226 ----DTKDRWFPALLKSLRSQRVIFVSCGEDHTAALTKLRGVFTFGAGGYGQLGHNCTNH 281
Query: 385 AWYPSPVDWCVGEV 398
P V +G V
Sbjct: 282 EINPRKVFELMGNV 295
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 38/228 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG +GQ G E +R+P+ + ++ + +ACG+ H+ A++
Sbjct: 102 KGQVFSWGLGSNGQLGLNNFEECVRVPRNIK-------CLSDVQIAQVACGYWHSHALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
G +F+WG N+FGQLG G P+ ++ LQ +S G + AI T
Sbjct: 155 GGQVFSWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAI--------T 206
Query: 139 ISTSRLWVWGQNQ----GSN------FPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+S + ++ WG+N+ G N FP L + I VSCG H AL++ +
Sbjct: 207 LSGA-VFGWGKNKFGQLGLNDTKDRWFPALLKSLRSQRVIF--VSCGEDHTAALTKLRGV 263
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG 236
+G YGQLG T + +V + +TQ+SCG
Sbjct: 264 FTFGAGGYGQLGHNCTNHEINPRKVFELMGNV---------VTQISCG 302
>gi|54261597|gb|AAH84600.1| LOC495281 protein, partial [Xenopus laevis]
Length = 1031
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/319 (31%), Positives = 147/319 (46%), Gaps = 72/319 (22%)
Query: 56 CPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
C N D+ CG HT V DGT++T G N+ GQLG ++ RK P++V L ++
Sbjct: 12 CDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGH--DKSRKKPDQVGALDAQT 69
Query: 116 VKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNF-----------PRLFWGAFT 164
+ ++SCG T A+ ND +++ WG PR +
Sbjct: 70 IVAVSCGEAHTLAL-----ND----KGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKSLY- 119
Query: 165 PNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYA------ 218
+ I QV+CG H +ALS+ + +WG N+YGQLG G + PR IK A
Sbjct: 120 -DIQIVQVACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSLAGIPFAH 178
Query: 219 -----------------------KF----LDE-----APEL------EKITQVSCGEYHS 240
KF L++ AP L +KI + CGE H+
Sbjct: 179 IAAGGGHSFALTMSGAIFGWGRNKFGQLGLNDETDRSAPALLKSLRSQKIIHICCGEDHT 238
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT- 299
AA+++ G V+T+G G GQLGH S + E+ PR+V L G + +ACG H+ A
Sbjct: 239 AALTKEGGVFTFGAGGYGQLGH---NSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVP 295
Query: 300 SKGALYAWGGSQAGQLGLG 318
S G +Y++G GQLG G
Sbjct: 296 SSGRIYSFGLGGNGQLGTG 314
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 152/317 (47%), Gaps = 36/317 (11%)
Query: 99 EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST---SRLWVWGQNQGSNF 155
EE P + ++ V+ + CG+ T + + DGT+ T + L G ++
Sbjct: 3 EEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLD----DGTVYTCGCNDLGQLGHDKSRKK 58
Query: 156 PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIK 215
P GA TI+ VSCG H +AL++ G + +WG+ +GQ+G + + ++ PR IK
Sbjct: 59 PDQV-GALDAQTIVA-VSCGEAHTLALNDKGQVFSWGHAAHGQIGLSVAEDYIRVPRNIK 116
Query: 216 GYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPR 275
+I QV+CG +HS A+S+ ++Y+WG GQLG S KE PR
Sbjct: 117 SLYDI--------QIVQVACGHHHSLALSKESDIYSWGQNQYGQLGLGS--EIKKESAPR 166
Query: 276 RVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYF 335
+ +L GI +A GG HS ALT GA++ WG ++ GQLGL +T
Sbjct: 167 HIKSLAGIPFAHIAAGGGHSFALTMSGAIFGWGRNKFGQLGLNDETD------------- 213
Query: 336 RNIPILVV---PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVD 392
R+ P L+ + + CG HT ++G + +G YGQ + + + P V
Sbjct: 214 RSAPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVF 273
Query: 393 WCVGE-VRKLAAGGGHS 408
+G V ++A G H+
Sbjct: 274 ELMGSIVTQIACGRQHT 290
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 92/189 (48%), Gaps = 20/189 (10%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+ + V CG H+ V ++G VYT G +GQLGH + P +V ALD I
Sbjct: 18 KNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKSRKK-----PDQVGALDAQTIVA 72
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
V+CG H+ AL KG +++WG + GQ+GL + +P RNI L V
Sbjct: 73 VSCGEAHTLALNDKGQVFSWGHAAHGQIGLS-VAEDYIRVP-------RNIKSLYDIQIV 124
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQ---AANEKSTYAWYPSPVDWCVG-EVRKLAA 403
Q VACGH H+L ++ I+ WG N YGQ + K A P + G +AA
Sbjct: 125 Q-VACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIKKESA--PRHIKSLAGIPFAHIAA 181
Query: 404 GGGHSAVLA 412
GGGHS L
Sbjct: 182 GGGHSFALT 190
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 102/221 (46%), Gaps = 26/221 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ +S IY WG N GQ G ++ P+ + L G P + IA G H+ A
Sbjct: 136 LSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIK-SLAGIP------FAHIAAGGGHSFA 188
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +
Sbjct: 189 LTMSGAIFGWGRNKFGQLGLNDETDRSAPALLKSLRSQKIIHICCGEDHTAALTK----E 244
Query: 137 GTISTSRLWVWGQ------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQ 189
G + T +GQ N N PR + +I+ Q++CG H +A + G +
Sbjct: 245 GGVFTFGAGGYGQLGHNSTNHEVN-PRKVFELM--GSIVTQIACGRQHTLAFVPSSGRIY 301
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKG----YAKFLDEAPE 226
++G GQLG G T + P +KG + ++ PE
Sbjct: 302 SFGLGGNGQLGTGST-SNRKSPFTVKGNWLTHEDYVQRLPE 341
>gi|379718300|ref|YP_005310431.1| hypothetical protein PM3016_306 [Paenibacillus mucilaginosus 3016]
gi|378566972|gb|AFC27282.1| hypothetical protein PM3016_306 [Paenibacillus mucilaginosus 3016]
Length = 1239
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 169/375 (45%), Gaps = 68/375 (18%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I + ++ WGYN GQ G G +P ++ L G IA G HT A
Sbjct: 719 IKSDGTVWGWGYNGHGQLGT-GTSNSTSVPGKVI-NLTGMKM--------IAGGENHTVA 768
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ SDGTL TWG N +GQLGD + R P +V L + ++S G + + A+ ++D
Sbjct: 769 LRSDGTLHTWGYNGYGQLGDDSTTTRYSPVQVSTLTNW--TAVSAGENHSLAL----KSD 822
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAF----TPNTI-----ICQVSCGSVHVVALSECGL 187
GT+ W +G N + +L G TP + + ++ G +AL G
Sbjct: 823 GTV-----WAFGYN---GYGQLGDGTTSSQRTPVQVKDLTGVVAIAAGKDFSLALKSDGT 874
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ +WG N YG+LG G T + + L + ++ G+YH A+ ++G
Sbjct: 875 VWSWGQNTYGELGNGTTTR-----------SSVPVQVALLTDVKAIAAGDYHGVALKKDG 923
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF-IKDVACGGVHSCALTSKGALYA 306
V+ WG G+LG+ S + + G+ IK +A G H+ AL S G +++
Sbjct: 924 SVFAWGYNGNGELGNSS-------TISQSTPVQSGVTGIKGIAAGPYHTLALKSDGTVWS 976
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN--GVQLVACGHSHTLVYMRDG 364
WG + GQLG G T R++P +P + +A G + ++ Y DG
Sbjct: 977 WGYNGYGQLGNGNNTS-------------RSVP-AAIPGLASIASIAAGENQSIAYGNDG 1022
Query: 365 RIHGWGYNSYGQAAN 379
++ WG N+ GQ N
Sbjct: 1023 ILYSWGRNANGQLGN 1037
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 162/350 (46%), Gaps = 47/350 (13%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
L ++ HT + SDGT++ WG N GQLG GT P KV L +K I+ G +
Sbjct: 707 LAVSLLGNHTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVINLTG--MKMIAGGEN 764
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQN----QGSNFPRLFWGAFTPNTII--CQVSCGSVH 178
T A+ +DGT+ T WG N G + + +T+ VS G H
Sbjct: 765 HTVAL----RSDGTLHT-----WGYNGYGQLGDDSTTTRYSPVQVSTLTNWTAVSAGENH 815
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
+AL G + A+GYN YGQLG G T + P +K +L + ++ G+
Sbjct: 816 SLALKSDGTVWAFGYNGYGQLGDGTTSS-QRTPVQVK----------DLTGVVAIAAGKD 864
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
S A+ +G V++WG + G+LG+ + + +P +V L + K +A G H AL
Sbjct: 865 FSLALKSDGTVWSWGQNTYGELGNGTTT---RSSVPVQVALLTDV--KAIAAGDYHGVAL 919
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 358
G+++AWG + G+LG S T ++ P+ G++ +A G HTL
Sbjct: 920 KKDGSVFAWGYNGNGELG-------------NSSTISQSTPVQSGVTGIKGIAAGPYHTL 966
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
DG + WGYN YGQ N +T P+ + + + +AAG S
Sbjct: 967 ALKSDGTVWSWGYNGYGQLGNGNNTSRSVPAAIP-GLASIASIAAGENQS 1015
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 143/305 (46%), Gaps = 50/305 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WGYN GQ G + P Q+ + W ++ G H+ A+ SDGT
Sbjct: 775 LHTWGYNGYGQLGDDSTTTRYS-PVQVSTL---------TNWTAVSAGENHSLALKSDGT 824
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ +G N +GQLGDGT ++ P +VK L V +I+ G + A+ ++DGT+
Sbjct: 825 VWAFGYNGYGQLGDGTTSSQRTPVQVKDLTG--VVAIAAGKDFSLAL----KSDGTV--- 875
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQV---------SCGSVHVVALSECGLLQAWGY 193
W WGQN + L G T +++ QV + G H VAL + G + AWGY
Sbjct: 876 --WSWGQN---TYGELGNGTTTRSSVPVQVALLTDVKAIAAGDYHGVALKKDGSVFAWGY 930
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
N G+LG T Q V G + I ++ G YH+ A+ +G V++WG
Sbjct: 931 NGNGELGNSSTIS--QSTPVQSG----------VTGIKGIAAGPYHTLALKSDGTVWSWG 978
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
GQLG+ + S +P + L I +A G S A + G LY+WG + G
Sbjct: 979 YNGYGQLGNGNNTS---RSVPAAIPGLAS--IASIAAGENQSIAYGNDGILYSWGRNANG 1033
Query: 314 QLGLG 318
QLG G
Sbjct: 1034 QLGNG 1038
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 92/230 (40%), Gaps = 58/230 (25%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ +GYN GQ G G R P Q+ +L G A IA G + + A+ SDGT
Sbjct: 825 VWAFGYNGYGQLG-DGTTSSQRTPVQVK-DLTGVVA--------IAAGKDFSLALKSDGT 874
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE-------- 134
+++WG N +G+LG+GT P +V L VK+I+ G + A+ +
Sbjct: 875 VWSWGQNTYGELGNGTTTRSSVPVQVALLTD--VKAIAAGDYHGVALKKDGSVFAWGYNG 932
Query: 135 -----NDGTISTSR---------------------------LWVWGQN------QGSNFP 156
N TIS S +W WG N G+N
Sbjct: 933 NGELGNSSTISQSTPVQSGVTGIKGIAAGPYHTLALKSDGTVWSWGYNGYGQLGNGNNTS 992
Query: 157 RLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCE 206
R A I ++ G +A G+L +WG N GQLG G T +
Sbjct: 993 RSVPAAIPGLASIASIAAGENQSIAYGNDGILYSWGRNANGQLGNGTTVD 1042
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 63/124 (50%), Gaps = 13/124 (10%)
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
V+ G H+ + S G ++ WG + GQLG G T + + +P + ++ G+
Sbjct: 709 VSLLGNHTMFIKSDGTVWGWGYNGHGQLGTG--TSNSTSVPGK----------VINLTGM 756
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH 407
+++A G +HT+ DG +H WGYN YGQ ++ +T + P V + ++AG H
Sbjct: 757 KMIAGGENHTVALRSDGTLHTWGYNGYGQLGDDSTTTRYSPVQVS-TLTNWTAVSAGENH 815
Query: 408 SAVL 411
S L
Sbjct: 816 SLAL 819
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 50/108 (46%), Gaps = 12/108 (11%)
Query: 3 INEIIGETARPVDNIPAKS--AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA 60
+ I G A P + KS ++ WGYN GQ G G +P +P G + A
Sbjct: 952 VTGIKGIAAGPYHTLALKSDGTVWSWGYNGYGQLGN-GNNTSRSVPAAIP----GLASIA 1006
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
+ IA G + A +DG L++WG N GQLG+GT P KV
Sbjct: 1007 S-----IAAGENQSIAYGNDGILYSWGRNANGQLGNGTTVDTNVPHKV 1049
>gi|428181106|gb|EKX49971.1| hypothetical protein GUITHDRAFT_161991 [Guillardia theta CCMP2712]
Length = 658
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 161/379 (42%), Gaps = 71/379 (18%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
I CG +H A+ + G + +WG E GQLG + P + +L S+ VK ++CG +
Sbjct: 114 ITCGSDHVLALDASGKIRSWGRGESGQLGHASFSHSSTPSIIDELASQRVKEVACGVAFS 173
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQ----------GSNFPRLFWGAFTPNTIICQVSCGS 176
AA+ E +L+ WG N+ S PR+ + + ++CG+
Sbjct: 174 AALME---------GGQLYTWGCNRYGQLGQGDRTSSAIPRML--PSMNHRHVHLMACGA 222
Query: 177 VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG 236
H+V L+ + WG N YGQLG G + P+ ++ + I Q+ G
Sbjct: 223 AHIVVLTTSRDVYTWGNNSYGQLGHGFRKKHCLQPKSVRVMSGL--------DIKQIVAG 274
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD-GIFIKDVACGGVHS 295
E HS ++ G++YTWG G GQLGH ++S D +P + LD + G
Sbjct: 275 ENHSCVMTSFGDIYTWGRGDFGQLGHGDMESKD---IPTLLSPLDPKTQASLIVSGADFI 331
Query: 296 CALTSKGALYAWGGSQAGQLGLG-----------------PQTRSFSLIPNESDTYFRNI 338
A+T GA+Y+WG + GQLG G P+ SF E D
Sbjct: 332 MAMTYSGAVYSWGRNCFGQLGHGVDMHYSKSNRFPSDVISPKIISFFAASEEHDAI---- 387
Query: 339 PILVVPNGVQLVACGHSHTL-VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE 397
+ ++CG H L + + + WG +GQ + ++ P P E
Sbjct: 388 -------SLSSISCGSHHVLAITEKKDTLFAWGRGEHGQLGLDPRDTSFRPIP-----QE 435
Query: 398 VRKLAAGGGHSAVLADACS 416
V+K+ VLA ACS
Sbjct: 436 VKKMKG----MIVLAAACS 450
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 156/391 (39%), Gaps = 64/391 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A I WG SGQ G P + A+ R ++ACG +AA
Sbjct: 124 LDASGKIRSWGRGESGQLGHAS------FSHSSTPSIID--ELASQRVKEVACGVAFSAA 175
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ G L+TWG N +GQLG G P + + V ++CGA + R+
Sbjct: 176 LMEGGQLYTWGCNRYGQLGQGDRTSSAIPRMLPSMNHRHVHLMACGAAHIVVLTTSRD-- 233
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGA--FTPNTI-------ICQVSCGSVHVVALSECGL 187
++ WG N F P ++ I Q+ G H ++ G
Sbjct: 234 -------VYTWGNNSYGQLGHGFRKKHCLQPKSVRVMSGLDIKQIVAGENHSCVMTSFGD 286
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ WG ++GQLG G E P ++ LD P+ + VS ++ A++ +G
Sbjct: 287 IYTWGRGDFGQLGHG-DMESKDIPTLLSP----LD--PKTQASLIVSGADF-IMAMTYSG 338
Query: 248 EVYTWGLGSVGQLGH-CSLQSGDKELLPRRVVAL------------DGIFIKDVACGGVH 294
VY+WG GQLGH + P V++ D I + ++CG H
Sbjct: 339 AVYSWGRNCFGQLGHGVDMHYSKSNRFPSDVISPKIISFFAASEEHDAISLSSISCGSHH 398
Query: 295 SCALT-SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG 353
A+T K L+AWG + GQLGL P+ SF IP E I V AC
Sbjct: 399 VLAITEKKDTLFAWGRGEHGQLGLDPRDTSFRPIPQEVKKMKGMI--------VLAAACS 450
Query: 354 HSHTLVYMR--------DGRIHGWGYNSYGQ 376
+H++V D ++ WG S+GQ
Sbjct: 451 ENHSVVVATMPGSGPKGDMKVFSWGRGSFGQ 481
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 145/332 (43%), Gaps = 64/332 (19%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDI-ACGHEHTAAVASDG 81
+Y WG N GQ G+ R IP+ LP N R + + ACG H + +
Sbjct: 182 LYTWGCNRYGQLGQGDRTSSA-IPRMLP--------SMNHRHVHLMACGAAHIVVLTTSR 232
Query: 82 TLFTWGANEFGQLGDGTEEGRKH---PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
++TWG N +GQLG G +KH P+ V+ + +K I G EN
Sbjct: 233 DVYTWGNNSYGQLGHGFR--KKHCLQPKSVRVMSGLDIKQIVAG-----------ENHSC 279
Query: 139 ISTS--RLWVWGQN----------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
+ TS ++ WG+ + + P L P T + G+ ++A++ G
Sbjct: 280 VMTSFGDIYTWGRGDFGQLGHGDMESKDIPTLL-SPLDPKTQASLIVSGADFIMAMTYSG 338
Query: 187 LLQAWGYNEYGQLGRGITCE---------GLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
+ +WG N +GQLG G+ + P++I +A E + ++ +SCG
Sbjct: 339 AVYSWGRNCFGQLGHGVDMHYSKSNRFPSDVISPKIISFFAA--SEEHDAISLSSISCGS 396
Query: 238 YHSAAVSENGE-VYTWGLGSVGQLGHCSLQSGDKEL--LPRRVVALDGIFIKDVACGGVH 294
+H A++E + ++ WG G GQLG L D +P+ V + G+ + AC H
Sbjct: 397 HHVLAITEKKDTLFAWGRGEHGQLG---LDPRDTSFRPIPQEVKKMKGMIVLAAACSENH 453
Query: 295 SCALTS------KGAL--YAWGGSQAGQLGLG 318
S + + KG + ++WG GQLG G
Sbjct: 454 SVVVATMPGSGPKGDMKVFSWGRGSFGQLGYG 485
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 93/184 (50%), Gaps = 15/184 (8%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
I ++CG H A+ +G++ +WG G GQLGH S P + L +K+VA
Sbjct: 111 IKLITCGSDHVLALDASGKIRSWGRGESGQLGHASFSHSST---PSIIDELASQRVKEVA 167
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
CG S AL G LY WG ++ GQLG G R+ S IP R +P + + V L
Sbjct: 168 CGVAFSAALMEGGQLYTWGCNRYGQLGQG--DRTSSAIP-------RMLPSMNHRH-VHL 217
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAAN-EKSTYAWYPSPVDWCVG-EVRKLAAGGGH 407
+ACG +H +V ++ WG NSYGQ + + + P V G +++++ AG H
Sbjct: 218 MACGAAHIVVLTTSRDVYTWGNNSYGQLGHGFRKKHCLQPKSVRVMSGLDIKQIVAGENH 277
Query: 408 SAVL 411
S V+
Sbjct: 278 SCVM 281
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 117/282 (41%), Gaps = 69/282 (24%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG N GQ G R++ L P+ +G + + I G H+ + S G
Sbjct: 234 VYTWGNNSYGQLGHGFRKKHC-----LQPKSVRVMSGLDIK--QIVAGENHSCVMTSFGD 286
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKS-ISCGAHCTAAIAEPRENDGTIST 141
++TWG +FGQLG G E + P + L + S I GA A+ +
Sbjct: 287 IYTWGRGDFGQLGHGDMESKDIPTLLSPLDPKTQASLIVSGADFIMAMTY---------S 337
Query: 142 SRLWVWGQN--------------QGSNFPRLFWGAFTPNTI-------------ICQVSC 174
++ WG+N + + FP +P I + +SC
Sbjct: 338 GAVYSWGRNCFGQLGHGVDMHYSKSNRFPS---DVISPKIISFFAASEEHDAISLSSISC 394
Query: 175 GSVHVVALSEC-GLLQAWGYNEYGQLG---RGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
GS HV+A++E L AWG E+GQLG R + + P+ +K + +
Sbjct: 395 GSHHVLAITEKKDTLFAWGRGEHGQLGLDPRDTSFRPI--PQEVKKMKGMI--------V 444
Query: 231 TQVSCGEYHSAAVSE--------NGEVYTWGLGSVGQLGHCS 264
+C E HS V+ + +V++WG GS GQLG+ S
Sbjct: 445 LAAACSENHSVVVATMPGSGPKGDMKVFSWGRGSFGQLGYGS 486
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 274 PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDT 333
P+ VV+L G+ IK + CG H AL + G + +WG ++GQLG + S S P+ D
Sbjct: 100 PQEVVSLAGLSIKLITCGSDHVLALDASGKIRSWGRGESGQLGHA--SFSHSSTPSIIDE 157
Query: 334 YFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV-D 392
+ V+ VACG + + M G+++ WG N YGQ T + P +
Sbjct: 158 --------LASQRVKEVACGVAFSAALMEGGQLYTWGCNRYGQLGQGDRTSSAIPRMLPS 209
Query: 393 WCVGEVRKLAAGGGHSAVL 411
V +A G H VL
Sbjct: 210 MNHRHVHLMACGAAHIVVL 228
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 14/87 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG GQ G R+ R Q ++ G L AC H+ VA+
Sbjct: 406 KDTLFAWGRGEHGQLGLDPRDTSFRPIPQEVKKMKGMIV------LAAACSENHSVVVAT 459
Query: 80 --------DGTLFTWGANEFGQLGDGT 98
D +F+WG FGQLG G+
Sbjct: 460 MPGSGPKGDMKVFSWGRGSFGQLGYGS 486
>gi|348666178|gb|EGZ06006.1| hypothetical protein PHYSODRAFT_533148 [Phytophthora sojae]
Length = 429
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 149/310 (48%), Gaps = 41/310 (13%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQ--LRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAV 77
+S++Y WG GQ G + ++L P+L G ++ G H+AA+
Sbjct: 41 QSSVYTWGNGTLGQLGHGPVVKSGIRNAYEELTPKLLEAFEGKAITHVEF--GASHSAAI 98
Query: 78 ASDGTLFTWGANEFGQLGDG-TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
DG L+ WG+NE+ +LG G + E P +V+ L+ + +SCG + TAA+ + D
Sbjct: 99 DEDGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGVKIVDVSCGDYFTAAV----DAD 154
Query: 137 GTISTSRLWVWG-------------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALS 183
G + + W WG + PRL I V CG H VALS
Sbjct: 155 GKMYS---WGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPILTVECGEFHTVALS 211
Query: 184 ECGLLQAWGYNEYGQLGRG--ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
+ G + AWG EYG+LG G TCE P I+ ++K + + ++ G S
Sbjct: 212 KDGEIWAWGNGEYGRLGNGESDTCE---VPEPIEFFSK--------DNVVSIAAGRDFSF 260
Query: 242 AVSENGEVYTWGLGSVGQL---GHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
A+++NGE+Y+WG S QL G ++ + E +P V A +G+ +K +A G H+ A+
Sbjct: 261 ALTDNGELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLSVKQIAAGYDHAAAV 320
Query: 299 TSKGALYAWG 308
T G LY WG
Sbjct: 321 TDDGRLYMWG 330
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 150/343 (43%), Gaps = 58/343 (16%)
Query: 55 GCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDG--TEEGRKH------PE 106
GC A +R L +H A ++ +++TWG GQLG G + G ++ P+
Sbjct: 19 GCRASV-ARSLATRSALQH--AFSTQSSVYTWGNGTLGQLGHGPVVKSGIRNAYEELTPK 75
Query: 107 KVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGS-----------NF 155
++ + + + + GA +AAI E DG +L+VWG N+ S
Sbjct: 76 LLEAFEGKAITHVEFGASHSAAIDE----DG-----KLYVWGSNEYSKLGLGESSEMETL 126
Query: 156 PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN----EYGQLGRGITCEGLQGP 211
PR I VSCG A+ G + +WG+ + + P
Sbjct: 127 PREV--EALKGVKIVDVSCGDYFTAAVDADGKMYSWGWGGSTMKGAGGLGHAGGKDEPTP 184
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
R++ +D+ I V CGE+H+ A+S++GE++ WG G G+LG+ D
Sbjct: 185 RLL---TTLVDQGV---PILTVECGEFHTVALSKDGEIWAWGNGEYGRLGNGE---SDTC 235
Query: 272 LLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNES 331
+P + + +A G S ALT G LY+WGG+ QLG+G
Sbjct: 236 EVPEPIEFFSKDNVVSIAAGRDFSFALTDNGELYSWGGNSQNQLGIGGGLA--------M 287
Query: 332 DTY-FRNIPILV-VPNG--VQLVACGHSHTLVYMRDGRIHGWG 370
D Y +IP+LV NG V+ +A G+ H DGR++ WG
Sbjct: 288 DVYNIESIPVLVEAFNGLSVKQIAAGYDHAAAVTDDGRLYMWG 330
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 110/241 (45%), Gaps = 13/241 (5%)
Query: 181 ALSECGLLQAWGYNEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
A S + WG GQLG G + G++ + L EA E + IT V G H
Sbjct: 37 AFSTQSSVYTWGNGTLGQLGHGPVVKSGIR--NAYEELTPKLLEAFEGKAITHVEFGASH 94
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT 299
SAA+ E+G++Y WG +LG +S + E LPR V AL G+ I DV+CG + A+
Sbjct: 95 SAAIDEDGKLYVWGSNEYSKLGLG--ESSEMETLPREVEALKGVKIVDVSCGDYFTAAVD 152
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHT 357
+ G +Y+WG G + D + +V GV + V CG HT
Sbjct: 153 ADGKMYSWGWG-----GSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPILTVECGEFHT 207
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADACS 416
+ +DG I WG YG+ N +S P P+++ + V +AAG S L D
Sbjct: 208 VALSKDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGRDFSFALTDNGE 267
Query: 417 L 417
L
Sbjct: 268 L 268
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 131/301 (43%), Gaps = 53/301 (17%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLP-PELFGCPAGANSRWLDIACGHEHTA 75
+ A +Y WG+ G T + K P P L L + CG HT
Sbjct: 151 VDADGKMYSWGWG--GSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPILTVECGEFHTV 208
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
A++ DG ++ WG E+G+LG+G + + PE ++ + V SI+ G + A+ + E
Sbjct: 209 ALSKDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGRDFSFALTDNGE- 267
Query: 136 DGTISTSRLWVWG---QNQGSNFPRLFWGAFTPNTI-----------ICQVSCGSVHVVA 181
L+ WG QNQ L + +I + Q++ G H A
Sbjct: 268 --------LYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLSVKQIAAGYDHAAA 319
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
+++ G L WG + + P + ++ K+ QV+CG ++
Sbjct: 320 VTDDGRLYMWGSKIWIE------------PHEMTAVNEY--------KMVQVACGRQYTV 359
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHSCALT 299
A+SENGEV+T+G GS LGH GD+ +L P ++ AL + I ++CG H A+
Sbjct: 360 ALSENGEVFTFGKGSSNCLGH-----GDRKNQLQPVQIEALADVNITSISCGDYHMGAIA 414
Query: 300 S 300
+
Sbjct: 415 T 415
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Query: 27 GYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTW 86
GY+H+ GR + P A + + +ACG ++T A++ +G +FT+
Sbjct: 313 GYDHAAAVTDDGRLYMWGSKIWIEPHEM--TAVNEYKMVQVACGRQYTVALSENGEVFTF 370
Query: 87 GANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
G LG G + + P +++ L + SISCG + AIA P
Sbjct: 371 GKGSSNCLGHGDRKNQLQPVQIEALADVNITSISCGDYHMGAIATP 416
>gi|209878252|ref|XP_002140567.1| regulator of chromosome condensation family protein
[Cryptosporidium muris RN66]
gi|209556173|gb|EEA06218.1| regulator of chromosome condensation family protein
[Cryptosporidium muris RN66]
Length = 477
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 125/483 (25%), Positives = 204/483 (42%), Gaps = 71/483 (14%)
Query: 18 PAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAV 77
P KS + WG + GQ G E + P+L N R ++ CG H+A +
Sbjct: 5 PVKSGVVAWGSSEYGQLGAIYEESNIE------PKLIESLYSFN-RIKEVCCGGHHSAVI 57
Query: 78 ASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG 137
G L WG GQLG G + P + +++ V ++SC +AAI E DG
Sbjct: 58 THSGELIVWGYGGCGQLGLGDLKDIVIPRVMTSIKN--VINVSCSDRHSAAILE----DG 111
Query: 138 TISTSRLWVWGQNQGSNF----------------PRLFWGAFTPNTIICQVSCGSVHVVA 181
RL+ WG N+ P+L I +VSCGS H
Sbjct: 112 -----RLYTWGCNKSGKLGIGSLNVNLNNNIICTPQLVEKLLNEKVI--KVSCGSFHTAC 164
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
L++ WG G+LG G T + + P++I+ A + + CG +H+A
Sbjct: 165 LTDLNKAYTWGLGMQGRLGHGDTND-VYTPKLIESLAGL--------SVKNIVCGGHHTA 215
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHSCALTS 300
+ NG+VY G G+ G+LG S + +P+ + +L IK+V+ G HS +T+
Sbjct: 216 ILLNNGKVYFCGGGAFGKLG---FGSKEDIYIPKLLQGSLTNKSIKEVSLGYQHSAVITT 272
Query: 301 KGALYAWG-GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
KG +Y WG G + G + GP+ S + ++ N ++CGHSHT+V
Sbjct: 273 KGKVYTWGQGGRLGHIYNGPEPDIL------SPKLVEKLNSIIAVN----ISCGHSHTVV 322
Query: 360 YMRDGRIHGWGYNS---YGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACS 416
G ++ WG +G ++ + +P + + +++ G H+ L+D
Sbjct: 323 ISNIGDVYAWGVTRNLGHGVIDSKPNDPTLHPILQN---KNIVQVSCGKTHTIALSDIEL 379
Query: 417 LKELCEFRLAESVTLSNASEIE---DVASRTGSEALARLCERLREHSLHGDEFDCDDDTR 473
L + L + S + D S SE + L +H++ D+++C DT
Sbjct: 380 LIDKVNSSLTSNYNEKKNSNLNYKGDENSFEISEVIDNLIFNKIKHNM--DKYNCITDTE 437
Query: 474 NGN 476
N
Sbjct: 438 KIN 440
>gi|440904419|gb|ELR54939.1| Putative E3 ubiquitin-protein ligase HERC6, partial [Bos grunniens
mutus]
Length = 1019
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 124/241 (51%), Gaps = 19/241 (7%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ VSCG H +A+ G + AWG GQLG G E P+ IK A
Sbjct: 77 VALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGI-------- 128
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
KI QV+CG YHS A+SE+G+V++WG S GQLG + + P+RV +L+GI + V
Sbjct: 129 KIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQV 186
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN-GV 347
A GG HS AL+ G + WG + AGQL L N ++ + I + GV
Sbjct: 187 AAGGHHSFALSLSGTSFGWGSNNAGQLALSGN--------NAPVQRYKPVSIGALKTLGV 238
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH 407
++CG+ HT V +DG++ +G NSYGQ ++ + P V+ G V ++ G H
Sbjct: 239 VSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQIDCGSDH 298
Query: 408 S 408
+
Sbjct: 299 T 299
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 147/326 (45%), Gaps = 45/326 (13%)
Query: 58 AGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFV 116
AG N+ L A G H+ + SDGT+ + G N GQLG GT G + PE++ L++ V
Sbjct: 20 AGGNT-LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRG-EQPERIPALETLHV 77
Query: 117 KSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFP--RLFWGAFTPNTI------ 168
+SCG + A+ R++ WG F P I
Sbjct: 78 ALVSCGKEHSLAVCH---------KGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGI 128
Query: 169 -ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL 227
I QV+CG H VALSE G + +WG N +GQLG G P+ ++ L+ P
Sbjct: 129 KIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRS----LEGIP-- 182
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+ QV+ G +HS A+S +G + WG + GQL + + P + AL + +
Sbjct: 183 --LAQVAAGGHHSFALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVSIGALKTLGVVS 240
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPN 345
++CG H+ LT G ++ +G + GQLG P T + P LV +
Sbjct: 241 ISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDP-------------TAEKRGPQLVERIEG 287
Query: 346 GVQLVACGHSHTLVYM-RDGRIHGWG 370
V + CG HTL Y+ G++ +G
Sbjct: 288 LVSQIDCGSDHTLAYIYTTGQVVSFG 313
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 116/252 (46%), Gaps = 45/252 (17%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG GQ G + IPK++ A + + +ACGH H+ A++
Sbjct: 93 KGRVFAWGAASEGQLGIGEFKETTFIPKKI-------KTLAGIKIIQVACGHYHSVALSE 145
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG +F+WG N GQLG G E + P++V+ L+ + ++ G H + A++ + G
Sbjct: 146 DGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFG- 204
Query: 139 ISTSRLWVWGQNQ-------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSE 184
WG N G+N P + P +I + +SCG H L++
Sbjct: 205 --------WGSNNAGQLALSGNNAP---VQRYKPVSIGALKTLGVVSISCGYKHTAVLTQ 253
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-V 243
G + +G N YGQLG T E +GP++++ ++Q+ CG H+ A +
Sbjct: 254 DGKVFTFGDNSYGQLGHDPTAEK-RGPQLVERIEGL---------VSQIDCGSDHTLAYI 303
Query: 244 SENGEVYTWGLG 255
G+V ++G G
Sbjct: 304 YTTGQVVSFGRG 315
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 62/148 (41%), Gaps = 13/148 (8%)
Query: 268 GDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLI 327
G + L R+V A G + A G HS L S G + + G + GQLG R
Sbjct: 9 GPRPLRERQVCA-GGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRG---- 63
Query: 328 PNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ-AANEKSTYAW 386
IP L + V LV+CG H+L GR+ WG S GQ E +
Sbjct: 64 -----EQPERIPALETLH-VALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTF 117
Query: 387 YPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
P + G ++ ++A G HS L++
Sbjct: 118 IPKKIKTLAGIKIIQVACGHYHSVALSE 145
>gi|354465912|ref|XP_003495420.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Cricetulus griseus]
Length = 1136
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 114/367 (31%), Positives = 174/367 (47%), Gaps = 62/367 (16%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++CG EHTA V + L+ +G+N +GQLG G++ P +K L+ E VK +CG + T
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEKVKLAACGRNHT 137
Query: 127 AAIAEPRENDGTISTSRLWVW---GQNQG----------SNFPRLFWGAFTPNTIICQVS 173
+ST + V+ G N+G F ++ G FTP I Q+S
Sbjct: 138 L-----------VSTDKGSVYAAGGNNEGQLGLGDTDDRDTFHQI--GFFTPKDNIKQLS 184
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
G+ AL+E G L WG N GQ+G V G + I+ +
Sbjct: 185 AGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTVG-----------KPISWI 233
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL-----PRRVVALDGIFIKDV 288
SCG YHSA V+ +GE+YT+G G+LG + +LL P+RV+ + I+ V
Sbjct: 234 SCGYYHSAFVTVDGELYTFGEPENGKLGLPN------QLLINHRSPQRVLGIPEKVIQ-V 286
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
ACGG H+ LT K +YA+G Q GQLGLG +F +E R + +
Sbjct: 287 ACGGGHTVVLTDK-VVYAFGLGQFGQLGLG----TFLFETSEPKVIER-----IKDQKIS 336
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQ--AANEKSTYAWYPSP-VDWCVGEVRKLAAGG 405
++CG +HT + G ++ +G +G+ E T ++P+ ++ V+ +A GG
Sbjct: 337 YISCGENHTALMTDIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFTVQLIACGG 396
Query: 406 GHSAVLA 412
H V A
Sbjct: 397 CHMLVFA 403
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 124/281 (44%), Gaps = 39/281 (13%)
Query: 141 TSRLWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
T ++ +G+ + N P FW F + IC +SCG H ++ L +G N +GQL
Sbjct: 49 TGAVFTFGKTKFAENIPSKFW--FKNDIPIC-LSCGDEHTAIVTGNNKLYMFGSNNWGQL 105
Query: 200 GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ 259
G G + + P IK EK+ +CG H+ ++ G VY G + GQ
Sbjct: 106 GLG-SKSAISKPTCIKALKP--------EKVKLAACGRNHTLVSTDKGSVYAAGGNNEGQ 156
Query: 260 LGHCSLQSGDKELLPRRVVALDGIF-----IKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
LG GD + R G F IK ++ G S ALT G L+ WG + GQ
Sbjct: 157 LGL-----GDTD--DRDTFHQIGFFTPKDNIKQLSAGANTSAALTEDGKLFMWGDNSEGQ 209
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
+GL + +S IP+E + V + ++CG+ H+ DG ++ +G
Sbjct: 210 IGL--KNKSNVCIPHE----------VTVGKPISWISCGYYHSAFVTVDGELYTFGEPEN 257
Query: 375 GQ--AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLAD 413
G+ N+ P V +V ++A GGGH+ VL D
Sbjct: 258 GKLGLPNQLLINHRSPQRVLGIPEKVIQVACGGGHTVVLTD 298
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 95/218 (43%), Gaps = 51/218 (23%)
Query: 13 PVDNIPAKSA-------------IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
P DNI SA +++WG N GQ G K + + IP ++ G
Sbjct: 176 PKDNIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNK-SNVCIPHEV-------TVG 227
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKH--PEKVKQLQSEFVK 117
W I+CG+ H+A V DG L+T+G E G+LG + H P++V + + ++
Sbjct: 228 KPISW--ISCGYYHSAFVTVDGELYTFGEPENGKLGLPNQLLINHRSPQRVLGIPEKVIQ 285
Query: 118 SISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAF-----TPNTI---- 168
++CG T + + ++ +G Q F +L G F P I
Sbjct: 286 -VACGGGHTVVLTD----------KVVYAFGLGQ---FGQLGLGTFLFETSEPKVIERIK 331
Query: 169 ---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGI 203
I +SCG H +++ GL+ +G +G+LG G+
Sbjct: 332 DQKISYISCGENHTALMTDIGLMYTFGDGRHGKLGLGM 369
>gi|260791114|ref|XP_002590585.1| hypothetical protein BRAFLDRAFT_123620 [Branchiostoma floridae]
gi|229275780|gb|EEN46596.1| hypothetical protein BRAFLDRAFT_123620 [Branchiostoma floridae]
Length = 710
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/314 (32%), Positives = 149/314 (47%), Gaps = 50/314 (15%)
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
N R +ACG EHTA V +G L+T+G+N++GQLG G + P VK L+ E K ++
Sbjct: 34 NDRICAVACGDEHTALVTENGRLYTFGSNDWGQLGLGHTKTASKPSCVKSLKHEKAKLVA 93
Query: 121 CG-AHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTP----------NTII 169
CG +H A + +++VWG G + +L G T ++
Sbjct: 94 CGRSHTLIATGD----------GKVYVWG---GGSEGQLGLGEDTTECTEPTLLDFDSKA 140
Query: 170 CQVSCGSVHVVALSECGLLQAWGYNEYGQLG-RGITCEGLQGPRVIKGYAKFLDEAPELE 228
VSCG H ++E G L +G EYG+LG + P+ + G E
Sbjct: 141 ISVSCGYYHTAVVTEDGNLYTFGETEYGKLGLNNSDLDSSDTPQKVTGIK---------E 191
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCS--LQSGDKELLPRRVVALDGIFIK 286
K+ V CG H+ A++E+G VYT+G G+ GQLGH + L+S P RV K
Sbjct: 192 KVKFVVCGGGHTTAIAESGAVYTFGNGASGQLGHGNSLLES----PTPHRVERFRDADCK 247
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN- 345
+CG + +T KG LY +G + G+LGLG + SF+ FR +
Sbjct: 248 HASCGENFTAVITGKGHLYTFGDGRHGKLGLGDE--SFT-------NQFRPFKVARFNKF 298
Query: 346 GVQLVACGHSHTLV 359
VQ VACG H +V
Sbjct: 299 QVQWVACGGCHMMV 312
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 113/246 (45%), Gaps = 30/246 (12%)
Query: 134 ENDGTISTSRLWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
++D T ++ +G+++ N FW N IC V+CG H ++E G L +G
Sbjct: 4 DDDDVPETGAIFTFGKSKFAENISSKFW---IRNDRICAVACGDEHTALVTENGRLYTFG 60
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
N++GQLG G T + P +K + EK V+CG H+ + +G+VY W
Sbjct: 61 SNDWGQLGLGHTKTASK-PSCVKSL--------KHEKAKLVACGRSHTLIATGDGKVYVW 111
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G GS GQLG L E ++ D I V+CG H+ +T G LY +G ++
Sbjct: 112 GGGSEGQLG---LGEDTTECTEPTLLDFDSKAIS-VSCGYYHTAVVTEDGNLYTFGETEY 167
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGRIHGWG 370
G+LGL N SD + P V + V+ V CG HT G ++ +G
Sbjct: 168 GKLGL-----------NNSDLDSSDTPQKVTGIKEKVKFVVCGGGHTTAIAESGAVYTFG 216
Query: 371 YNSYGQ 376
+ GQ
Sbjct: 217 NGASGQ 222
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 91/189 (48%), Gaps = 16/189 (8%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
++I V+CG+ H+A V+ENG +YT+G GQLG ++ K P V +L K
Sbjct: 35 DRICAVACGDEHTALVTENGRLYTFGSNDWGQLGLGHTKTASK---PSCVKSLKHEKAKL 91
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
VACG H+ T G +Y WGG GQLGLG T T +L +
Sbjct: 92 VACGRSHTLIATGDGKVYVWGGGSEGQLGLGEDT-----------TECTEPTLLDFDSKA 140
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAA--NEKSTYAWYPSPVDWCVGEVRKLAAGG 405
V+CG+ HT V DG ++ +G YG+ N + P V +V+ + GG
Sbjct: 141 ISVSCGYYHTAVVTEDGNLYTFGETEYGKLGLNNSDLDSSDTPQKVTGIKEKVKFVVCGG 200
Query: 406 GHSAVLADA 414
GH+ +A++
Sbjct: 201 GHTTAIAES 209
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 105/243 (43%), Gaps = 39/243 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG GQ G + P L +S+ + ++CG+ HTA V DG
Sbjct: 108 VYVWGGGSEGQLGLGEDTTECTEPTLL---------DFDSKAISVSCGYYHTAVVTEDGN 158
Query: 83 LFTWGANEFGQLG--DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
L+T+G E+G+LG + + P+KV ++ E VK + CG T AIAE G +
Sbjct: 159 LYTFGETEYGKLGLNNSDLDSSDTPQKVTGIK-EKVKFVVCGGGHTTAIAE----SGAVY 213
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFTPNTI------ICQ-VSCGSVHVVALSECGLLQAWGY 193
T GQ N + TP+ + C+ SCG ++ G L +G
Sbjct: 214 TFGNGASGQLGHGNS---LLESPTPHRVERFRDADCKHASCGENFTAVITGKGHLYTFGD 270
Query: 194 NEYGQLGRGITCEGLQ-GPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS----ENGE 248
+G+LG G Q P + + KF ++ V+CG H ++ +NGE
Sbjct: 271 GRHGKLGLGDESFTNQFRPFKVARFNKF--------QVQWVACGGCHMMVIASPRQQNGE 322
Query: 249 VYT 251
+ +
Sbjct: 323 ISS 325
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 9/122 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y +G SGQ G + P ++ E F ++ +CG TA + G
Sbjct: 211 AVYTFGNGASGQLGHGNSLLESPTPHRV--ERF-----RDADCKHASCGENFTAVITGKG 263
Query: 82 TLFTWGANEFGQLGDGTEE--GRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
L+T+G G+LG G E + P KV + V+ ++CG IA PR+ +G I
Sbjct: 264 HLYTFGDGRHGKLGLGDESFTNQFRPFKVARFNKFQVQWVACGGCHMMVIASPRQQNGEI 323
Query: 140 ST 141
S+
Sbjct: 324 SS 325
>gi|145594515|ref|YP_001158812.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
gi|145303852|gb|ABP54434.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
Length = 554
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 151/376 (40%), Gaps = 62/376 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+ WG N SGQ G + P G PAG L A G H+ A+ G
Sbjct: 59 VLAWGDNFSGQLGDGTTTARST------PVTVGLPAGTTITAL--AAGGSHSLALTDTGV 110
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ WG+N GQLGDGT R P V + G TA A R + T
Sbjct: 111 VLAWGSNSRGQLGDGTTTDRSTPVTVG---------LPAGTTITALAAGRRHSLALTDTG 161
Query: 143 RLWVWGQNQ------GSNFPRLFWGAFTPNTI------ICQVSCGSVHVVALSECGLLQA 190
+ WG N G+ R TP T+ S + +AL++ G A
Sbjct: 162 AVLAWGSNSNGQLGDGTTTAR-----STPVTVGLPAGTTITALAASTYSLALTDTGAALA 216
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG N GQLG G T + P + P IT ++ HS A+++ G V
Sbjct: 217 WGSNSRGQLGDGTTTD-RSTPVTV--------SLPAGTTITALAASYDHSLALTDTGAVL 267
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
WG S GQLG + P V G I +A G H+ LTS GA+ AWG +
Sbjct: 268 AWGSNSNGQLGDGTTT---NRSTPVTVGLPAGTTITALAAGRSHTLVLTSAGAVLAWGSN 324
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQL--VACGHSHTLVYMRDGRIH 367
GQLG + T R+ P+ V +P G + +A G+ H+L G +
Sbjct: 325 SNGQLG-------------DGTTTDRSTPVTVGLPAGTTITALAAGYYHSLALTDTGAVL 371
Query: 368 GWGYNSYGQAANEKST 383
WG NSYGQ + +T
Sbjct: 372 AWGGNSYGQLGDGTTT 387
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/349 (31%), Positives = 148/349 (42%), Gaps = 57/349 (16%)
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
T+ WG N GQLGDGT R P V + +++ G + A+ + T
Sbjct: 58 TVLAWGDNFSGQLGDGTTTARSTPVTVGLPAGTTITALAAGGSHSLALTD---------T 108
Query: 142 SRLWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
+ WG N G+ R TP T+ I ++ G H +AL++ G +
Sbjct: 109 GVVLAWGSNSRGQLGDGTTTDR-----STPVTVGLPAGTTITALAAGRRHSLALTDTGAV 163
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
AWG N GQLG G T + V G P IT ++ Y S A+++ G
Sbjct: 164 LAWGSNSNGQLGDGTTTA--RSTPVTVGL-------PAGTTITALAASTY-SLALTDTGA 213
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
WG S GQLG + + D+ P V G I +A HS ALT GA+ AWG
Sbjct: 214 ALAWGSNSRGQLGDGT--TTDRS-TPVTVSLPAGTTITALAASYDHSLALTDTGAVLAWG 270
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQL--VACGHSHTLVYMRDGR 365
+ GQLG G T R+ P+ V +P G + +A G SHTLV G
Sbjct: 271 SNSNGQLGDGTTTN-------------RSTPVTVGLPAGTTITALAAGRSHTLVLTSAGA 317
Query: 366 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ WG NS GQ + +T P V G + LAAG HS L D
Sbjct: 318 VLAWGSNSNGQLGDGTTTDRSTPVTVGLPAGTTITALAAGYYHSLALTD 366
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 53/130 (40%), Gaps = 17/130 (13%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+ WG N +GQ G + P G PAG L A G HT + S G
Sbjct: 265 AVLAWGSNSNGQLGDGTTTNRST------PVTVGLPAGTTITAL--AAGRSHTLVLTSAG 316
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+ WG+N GQLGDGT R P V + +++ G + + A+ + T
Sbjct: 317 AVLAWGSNSNGQLGDGTTTDRSTPVTVGLPAGTTITALAAGYYHSLALTD---------T 367
Query: 142 SRLWVWGQNQ 151
+ WG N
Sbjct: 368 GAVLAWGGNS 377
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 47/115 (40%), Gaps = 9/115 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+ WG N +GQ G + P G PAG L A G+ H+ A+ G
Sbjct: 317 AVLAWGSNSNGQLGDGTTTDRST------PVTVGLPAGTTITAL--AAGYYHSLALTDTG 368
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKS-ISCGAHCTAAIAEPREN 135
+ WG N +GQLGDGT R P V + +S H A +A P
Sbjct: 369 AVLAWGGNSYGQLGDGTTTDRSTPVTVGLPAGTTITVLVSMDNHGMALVAPPTST 423
>gi|339234781|ref|XP_003378945.1| putative HECT-domain protein [Trichinella spiralis]
gi|316978479|gb|EFV61464.1| putative HECT-domain protein [Trichinella spiralis]
Length = 994
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 158/307 (51%), Gaps = 33/307 (10%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+++ G N Q G G +R+ + + L + + + +ACG H A+ +DG
Sbjct: 72 SVFSCGNNDFYQLGHDGIKRKPNLYENLHWYIDVKQSFVGIHVISVACGDAHCVALTNDG 131
Query: 82 TLFTWGANEFGQLG---DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
LF+WG+N +GQLG ++P +++++ + I+CG++ + A+ DG
Sbjct: 132 HLFSWGSNVYGQLGVERMNVVAKARYP-RIQEINLANIVQIACGSNHSLAL---ESTDGV 187
Query: 139 ISTSRLWVWGQNQ----GSNFPRLFWGAFTPNTI----ICQVSCGSVHVVALSECGLLQA 190
L WG N G F G T N + ICQ++ G+ H + L+ G +
Sbjct: 188 -----LHAWGLNDHGQLGIGTRESFIGPTTVNKLMGIPICQLAAGASHSLVLTPSGTVFG 242
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG N +GQ+G+ + L P ++K +K+ +++CGE S AV+ G ++
Sbjct: 243 WGKNMFGQIGQNEQRDILY-PSLVK--------LLRTQKVIRLACGEDFSVAVTATGGLF 293
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
T+G G+ GQLGH + S EL P++V+ L G + DVACG H+ A+T + LYA+G +
Sbjct: 294 TFGAGTYGQLGHGNQNS---ELFPKQVMELMGSVVLDVACGRCHTLAIT-ENKLYAFGLN 349
Query: 311 QAGQLGL 317
+GQLGL
Sbjct: 350 TSGQLGL 356
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 113/354 (31%), Positives = 167/354 (47%), Gaps = 66/354 (18%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLG-DGTEEGRKHPEKVK---QLQSEF----VKS 118
IACG H+ + DG++F+ G N+F QLG DG + E + ++ F V S
Sbjct: 57 IACGRHHSVMLLDDGSVFSCGNNDFYQLGHDGIKRKPNLYENLHWYIDVKQSFVGIHVIS 116
Query: 119 ISCG-AHCTAAIAEPRENDGTISTSRLWVWGQN-------------QGSNFPRLFWGAFT 164
++CG AHC A NDG L+ WG N + +PR+
Sbjct: 117 VACGDAHCVAL-----TNDG-----HLFSWGSNVYGQLGVERMNVVAKARYPRIQEINLA 166
Query: 165 PNTIICQVSCGSVHVVAL-SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDE 223
I Q++CGS H +AL S G+L AWG N++GQLG G T E GP + L
Sbjct: 167 N---IVQIACGSNHSLALESTDGVLHAWGLNDHGQLGIG-TRESFIGPTTVNK----LMG 218
Query: 224 APELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL-PRRVVALDG 282
P I Q++ G HS ++ +G V+ WG GQ+G Q+ +++L P V L
Sbjct: 219 IP----ICQLAAGASHSLVLTPSGTVFGWGKNMFGQIG----QNEQRDILYPSLVKLLRT 270
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
+ +ACG S A+T+ G L+ +G GQLG G Q L P + ++
Sbjct: 271 QKVIRLACGEDFSVAVTATGGLFTFGAGTYGQLGHGNQNS--ELFPKQ---------VME 319
Query: 343 VPNGVQL-VACGHSHTLVYMRDGRIHGWGYNSYGQ--AANEKSTYAW-YPSPVD 392
+ V L VACG HTL + + +++ +G N+ GQ N K T + P P++
Sbjct: 320 LMGSVVLDVACGRCHTLA-ITENKLYAFGLNTSGQLGLLNVKHTTSIPLPIPIE 372
>gi|392355475|ref|XP_003752052.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Rattus
norvegicus]
Length = 608
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 113/356 (31%), Positives = 174/356 (48%), Gaps = 40/356 (11%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++CG EHTA V + L+ +G+N +GQLG G++ P +K L+ E VK +CG + T
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEKVKLAACGRNHT 137
Query: 127 -------AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHV 179
A N+G +L + + F ++ G FTP+ II Q+S G+
Sbjct: 138 LVSTDTGGVYAAGGNNEG-----QLGLGDTDDRDTFHQI--GFFTPSDIIKQLSAGANTS 190
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
AL+E G L WG N GQ+ GL+ K E + I+ +SCG YH
Sbjct: 191 AALTEDGKLFMWGDNSEGQI-------GLKN----KSNVCIPHEVTVGKPISWISCGYYH 239
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT 299
SA V+ +GE+YT+G G+LG + Q P+RV+ + I+ VACGG H+ LT
Sbjct: 240 SAFVTTDGELYTFGEPENGKLGLPN-QLLINHRSPQRVLGIPDKVIQ-VACGGGHTVVLT 297
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
K +YA+G Q GQLGLG +F +E R + + ++CG +HT +
Sbjct: 298 EK-VVYAFGLGQFGQLGLG----TFLFETSEPKIIDR-----IKDQKISHISCGENHTAL 347
Query: 360 YMRDGRIHGWGYNSYGQ--AANEKSTYAWYPSPV-DWCVGEVRKLAAGGGHSAVLA 412
G ++ +G +G+ E T ++P+ ++ V+ +A GG H V A
Sbjct: 348 MTDIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLKFTVQLIACGGCHMLVFA 403
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 125/276 (45%), Gaps = 29/276 (10%)
Query: 141 TSRLWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
T ++ +G+ + N P FW F + IC +SCG H ++ L +G N +GQL
Sbjct: 49 TGAVFTFGKTKFAENIPSKFW--FKNDVPIC-LSCGDEHTAIVTGNNKLYMFGSNNWGQL 105
Query: 200 GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ 259
G G + + P IK A + EK+ +CG H+ ++ G VY G + GQ
Sbjct: 106 GLG-SKSAISKPTCIK--------ALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQ 156
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LG + D++ + IK ++ G S ALT G L+ WG + GQ+GL
Sbjct: 157 LGLG--DTDDRDTFHQIGFFTPSDIIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGL-- 212
Query: 320 QTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAAN 379
+ +S IP+E + V + ++CG+ H+ DG ++ +G G+
Sbjct: 213 KNKSNVCIPHE----------VTVGKPISWISCGYYHSAFVTTDGELYTFGEPENGKLGL 262
Query: 380 EKSTYAWYPSP--VDWCVGEVRKLAAGGGHSAVLAD 413
+ SP V +V ++A GGGH+ VL +
Sbjct: 263 PNQLLINHRSPQRVLGIPDKVIQVACGGGHTVVLTE 298
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 90/195 (46%), Gaps = 38/195 (19%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+++WG N GQ G K + + IP ++ G W I+CG+ H+A V +DG
Sbjct: 199 LFMWGDNSEGQIGLKNKSN-VCIPHEV-------TVGKPISW--ISCGYYHSAFVTTDGE 248
Query: 83 LFTWGANEFGQLGDGTEEGRKH--PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
L+T+G E G+LG + H P++V + + ++ ++CG T + E
Sbjct: 249 LYTFGEPENGKLGLPNQLLINHRSPQRVLGIPDKVIQ-VACGGGHTVVLTE--------- 298
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFT-----PNTI-------ICQVSCGSVHVVALSECGLL 188
++ +G Q F +L G F P I I +SCG H +++ GL+
Sbjct: 299 -KVVYAFGLGQ---FGQLGLGTFLFETSEPKIIDRIKDQKISHISCGENHTALMTDIGLM 354
Query: 189 QAWGYNEYGQLGRGI 203
+G +G+LG G+
Sbjct: 355 YTFGDGRHGKLGLGM 369
>gi|148263541|ref|YP_001230247.1| regulator of chromosome condensation, RCC1 [Geobacter
uraniireducens Rf4]
gi|146397041|gb|ABQ25674.1| regulator of chromosome condensation, RCC1 [Geobacter
uraniireducens Rf4]
Length = 1919
Score = 129 bits (325), Expect = 3e-27, Method: Composition-based stats.
Identities = 102/324 (31%), Positives = 147/324 (45%), Gaps = 49/324 (15%)
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
HTA V +DGTL+TWGAN GQLGDGT R +P + I + T A
Sbjct: 88 HTAEVKNDGTLWTWGANWSGQLGDGTYNNRNYPMQ-----------IGTDTNWTVVAAGE 136
Query: 133 RENDGTISTSRLWVWGQNQGSNF--PRLFWGAFTPNTI-----ICQVSCGSVHVVALSEC 185
R + S LW WG N P++ G TP I ++ G+ H +AL
Sbjct: 137 RHSIALRSDGTLWAWGDNSSGQLGDPKIGIGTSTPQQIGASADWVAIAAGAYHSLALKTD 196
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G L AWG GQL + + P I ++++ ++ G HS A+
Sbjct: 197 GSLWAWGSGWSGQL--EMASDQSDTPLQIDSESRWV----------AIAAGYTHSVAIKS 244
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G ++ WG S GQLG + D +P +V D +I ++ G H+ A+ S G+L+
Sbjct: 245 DGTLWAWGDNSSGQLGDGTY---DGSNIPVQVGG-DTNWIA-ISAGMSHTVAIKSDGSLW 299
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQLVACGHSHTLVYMRDG 364
WGG+ +GQLG G N+S +NIP + + N + VA G HT+ DG
Sbjct: 300 GWGGNWSGQLGTG---------TNDS----QNIPTRIDIANDWRSVAAGDEHTIALKTDG 346
Query: 365 RIHGWGYNSYGQAANEKSTYAWYP 388
+ WG N YGQ + +P
Sbjct: 347 TMWAWGNNIYGQVGDGTQENRLFP 370
Score = 124 bits (311), Expect = 1e-25, Method: Composition-based stats.
Identities = 108/362 (29%), Positives = 166/362 (45%), Gaps = 59/362 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N SGQ G G P Q+ G ++ W +A G H+ A+ SDGT
Sbjct: 98 LWTWGANWSGQLG-DGTYNNRNYPMQI---------GTDTNWTVVAAGERHSIALRSDGT 147
Query: 83 LFTWGANEFGQLGD-GTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
L+ WG N GQLGD G P+++ +++V +I+ GA+ + A+ + DG+
Sbjct: 148 LWAWGDNSSGQLGDPKIGIGTSTPQQIGA-SADWV-AIAAGAYHSLAL----KTDGS--- 198
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPNTIICQ-----VSCGSVHVVALSECGLLQAWGYNEY 196
LW WG + TP I + ++ G H VA+ G L AWG N
Sbjct: 199 --LWAWGSGWSGQLEMASDQSDTPLQIDSESRWVAIAAGYTHSVAIKSDGTLWAWGDNSS 256
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG G T +G P + G ++ +S G H+ A+ +G ++ WG
Sbjct: 257 GQLGDG-TYDGSNIPVQVGGDTNWI----------AISAGMSHTVAIKSDGSLWGWGGNW 305
Query: 257 VGQLGHCSLQSGDKELLPRRV-VALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
GQLG + D + +P R+ +A D + VA G H+ AL + G ++AWG + GQ+
Sbjct: 306 SGQLG---TGTNDSQNIPTRIDIANDW---RSVAAGDEHTIALKTDGTMWAWGNNIYGQV 359
Query: 316 GLGPQTRSFSLIPNESDTYFRNIPILVVPNGV-QLVACGHSHTLVYMRDGRIHGWGYNSY 374
G G Q R PI + + + L++ G ++L DG + WG NS
Sbjct: 360 GDGTQEN-------------RLFPIQIGKDSLWSLISTGGYNSLAVKADGTLWIWGPNSN 406
Query: 375 GQ 376
G+
Sbjct: 407 GE 408
Score = 102 bits (253), Expect = 6e-19, Method: Composition-based stats.
Identities = 101/378 (26%), Positives = 162/378 (42%), Gaps = 48/378 (12%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I +++ WG N +G+ G E +L P + G + W D G EHT A
Sbjct: 769 IQKDGSLWTWGANWNGELGDGTTEDKLS-PVHI---------GMGTDWADAVVGEEHTVA 818
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG L+ WG N G+LGDGT +G+ P ++ +++ +++ G++ T A+ + +
Sbjct: 819 LKKDGGLWAWGYNGDGELGDGTTDGKLTPVRIG-FDNDW-SALAAGSYYTLAL----KKN 872
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNT---IICQVSCGSVHVVALSECGLLQAWGY 193
GT+ +G + W N + + + H VAL G L AWG
Sbjct: 873 GTLWGWGYNGYGGLGDGSKTDK-WEPVQINADADWVAIAASDTDHTVALKSDGSLWAWGQ 931
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
N YGQ+G G + R+ +D +S G + A+ +G ++ WG
Sbjct: 932 NNYGQVGDGTNIDKESPVRIA------ID-----TDWKSISAGAGFTMAIKTDGTLWAWG 980
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
S GQLG S + LP RV + D + + V G H A + G+L+ WG + +
Sbjct: 981 RNSNGQLGDGSRLN---RALPARVGS-DTDWTQ-VYAGWGHVVATKTDGSLWTWGANYSS 1035
Query: 314 QLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNS 373
QLG G R L+P S + N + + T+V G + GWGYN
Sbjct: 1036 QLGDGTYER--KLLPENSG----------INNVLSVATLKEDSTVVIKSGGVLWGWGYNG 1083
Query: 374 YGQAANEKSTYAWYPSPV 391
G+ + + P P+
Sbjct: 1084 DGELGSGTNEDIVIPIPI 1101
Score = 93.2 bits (230), Expect = 3e-16, Method: Composition-based stats.
Identities = 79/244 (32%), Positives = 115/244 (47%), Gaps = 39/244 (15%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+++ WG SGQ + Q P Q+ E SRW+ IA G+ H+ A+ SDG
Sbjct: 198 SLWAWGSGWSGQL--EMASDQSDTPLQIDSE---------SRWVAIAAGYTHSVAIKSDG 246
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
TL+ WG N GQLGDGT +G P +V + ++ +IS G T AI ++DG+
Sbjct: 247 TLWAWGDNSSGQLGDGTYDGSNIPVQVGG-DTNWI-AISAGMSHTVAI----KSDGS--- 297
Query: 142 SRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNE 195
LW WG N G+N + V+ G H +AL G + AWG N
Sbjct: 298 --LWGWGGNWSGQLGTGTNDSQNIPTRIDIANDWRSVAAGDEHTIALKTDGTMWAWGNNI 355
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
YGQ+G +G Q R+ F + + + +S G Y+S AV +G ++ WG
Sbjct: 356 YGQVG-----DGTQENRL------FPIQIGKDSLWSLISTGGYNSLAVKADGTLWIWGPN 404
Query: 256 SVGQ 259
S G+
Sbjct: 405 SNGE 408
Score = 81.3 bits (199), Expect = 9e-13, Method: Composition-based stats.
Identities = 58/193 (30%), Positives = 92/193 (47%), Gaps = 27/193 (13%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I + ++ WG N SGQ G G IP Q+ G ++ W+ I+ G HT A
Sbjct: 242 IKSDGTLWAWGDNSSGQLG-DGTYDGSNIPVQV---------GGDTNWIAISAGMSHTVA 291
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ SDG+L+ WG N GQLG GT + + P ++ + +++ +S++ G T A+ + D
Sbjct: 292 IKSDGSLWGWGGNWSGQLGTGTNDSQNIPTRI-DIANDW-RSVAAGDEHTIAL----KTD 345
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
GT +W WG N G+ RLF +++ +S G + +A+ G L
Sbjct: 346 GT-----MWAWGNNIYGQVGDGTQENRLFPIQIGKDSLWSLISTGGYNSLAVKADGTLWI 400
Query: 191 WGYNEYGQLGRGI 203
WG N G+ I
Sbjct: 401 WGPNSNGETNEAI 413
Score = 45.8 bits (107), Expect = 0.042, Method: Composition-based stats.
Identities = 52/233 (22%), Positives = 86/233 (36%), Gaps = 59/233 (25%)
Query: 225 PELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF 284
P L T + YH+ + ++G ++TWG G+LG + + +L P + G
Sbjct: 751 PILVTPTVKAASGYHTVVIQKDGSLWTWGANWNGELGDGTTED---KLSPVHIGM--GTD 805
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIP---------------- 328
D G H+ AL G L+AWG + G+LG G T L P
Sbjct: 806 WADAVVGEEHTVALKKDGGLWAWGYNGDGELGDG--TTDGKLTPVRIGFDNDWSALAAGS 863
Query: 329 --------------------------NESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
+++D + + I + V + A HT+
Sbjct: 864 YYTLALKKNGTLWGWGYNGYGGLGDGSKTDKW-EPVQINADADWVAIAASDTDHTVALKS 922
Query: 363 DGRIHGWGYNSYGQAAN----EKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
DG + WG N+YGQ + +K + DW + ++AG G + +
Sbjct: 923 DGSLWAWGQNNYGQVGDGTNIDKESPVRIAIDTDW-----KSISAGAGFTMAI 970
>gi|296486675|tpg|DAA28788.1| TPA: hect domain and RLD 6-like isoform 1 [Bos taurus]
Length = 980
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 124/241 (51%), Gaps = 19/241 (7%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ VSCG H +A+ G + AWG GQLG G E P+ IK A
Sbjct: 77 VALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGI-------- 128
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
KI QV+CG YHS A+SE+G+V++WG S GQLG + + P+RV +L+GI + V
Sbjct: 129 KIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQV 186
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN-GV 347
A GG HS AL+ G + WG + AGQL L N ++ + I + GV
Sbjct: 187 AAGGHHSFALSLSGTSFGWGSNSAGQLALSGN--------NAPVQRYKPVSIGALKTLGV 238
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH 407
++CG+ HT V +DG++ +G NSYGQ ++ + P V+ G V ++ G H
Sbjct: 239 VSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQIDCGSDH 298
Query: 408 S 408
+
Sbjct: 299 T 299
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 142/316 (44%), Gaps = 44/316 (13%)
Query: 58 AGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFV 116
AG N+ L A G H+ + SDGT+ + G N GQLG GT G + PE++ L++ V
Sbjct: 20 AGGNT-LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRG-EQPERIPALETLNV 77
Query: 117 KSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFP--RLFWGAFTPNTI------ 168
+SCG + A+ R++ WG F P I
Sbjct: 78 ALVSCGKEHSLAVCH---------KGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGI 128
Query: 169 -ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL 227
I QV+CG H VALSE G + +WG N +GQLG G P+ ++ L+ P
Sbjct: 129 KIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRS----LEGIP-- 182
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+ QV+ G +HS A+S +G + WG S GQL + + P + AL + +
Sbjct: 183 --LAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVS 240
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPN 345
++CG H+ LT G ++ +G + GQLG P T + P LV +
Sbjct: 241 ISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDP-------------TAEKRGPQLVERIEG 287
Query: 346 GVQLVACGHSHTLVYM 361
V + CG HTL Y+
Sbjct: 288 LVSQIDCGSDHTLAYI 303
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 116/252 (46%), Gaps = 45/252 (17%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG GQ G + IPK++ A + + +ACGH H+ A++
Sbjct: 93 KGRVFAWGAASEGQLGIGEFKETTFIPKKI-------KTLAGIKIIQVACGHYHSVALSE 145
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG +F+WG N GQLG G E + P++V+ L+ + ++ G H + A++ + G
Sbjct: 146 DGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFG- 204
Query: 139 ISTSRLWVWGQN-------QGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSE 184
WG N G+N P + P +I + +SCG H L++
Sbjct: 205 --------WGSNSAGQLALSGNNAP---VQRYKPVSIGALKTLGVVSISCGYKHTAVLTQ 253
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-V 243
G + +G N YGQLG T E +GP++++ ++Q+ CG H+ A +
Sbjct: 254 DGKVFTFGDNSYGQLGHDPTAEK-RGPQLVERIEGL---------VSQIDCGSDHTLAYI 303
Query: 244 SENGEVYTWGLG 255
G+V ++G G
Sbjct: 304 YTTGQVVSFGRG 315
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 62/150 (41%), Gaps = 12/150 (8%)
Query: 266 QSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
++G + L R V G + A G HS L S G + + G + GQLG R
Sbjct: 6 RAGGRRPLRERQVCAGGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRG-- 63
Query: 326 LIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ-AANEKSTY 384
IP L N V LV+CG H+L GR+ WG S GQ E
Sbjct: 64 -------EQPERIPALETLN-VALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKET 115
Query: 385 AWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ P + G ++ ++A G HS L++
Sbjct: 116 TFIPKKIKTLAGIKIIQVACGHYHSVALSE 145
>gi|222623048|gb|EEE57180.1| hypothetical protein OsJ_07117 [Oryza sativa Japonica Group]
Length = 463
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 160/332 (48%), Gaps = 47/332 (14%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSE----FVKSISCG 122
I+ G H+ A+ S G + +WG E GQLG G E R P + + + CG
Sbjct: 25 ISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVVICG 84
Query: 123 AHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQ 171
A T A ++ +L+ WG +F RL G F P I I Q
Sbjct: 85 ADHTTAYSDEE--------LQLYSWGWG---DFGRLGHGNSSDVFNPQPIQALQGVRITQ 133
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
++CG H +A++ G + +WG N+ GQLG G T + L P+ I+ + E ++
Sbjct: 134 IACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLL-PQKIQAF--------EGVRVK 184
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
++ G H+AAV+E+G++Y WG G G LG L D L+P +V +++G + VACG
Sbjct: 185 MIAAGAEHTAAVTEDGDLYGWGWGRYGNLG---LGDRDDRLIPEKVSSVNGQKMVLVACG 241
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNE----SDTYFRN---IPILVVP 344
H+ ++S G++Y +G S+ GQLG G L+P++ DT + ++
Sbjct: 242 WRHTITVSSSGSIYTYGWSKYGQLGHG--DFEDHLVPHKLEALKDTTISQEEAVELIFFF 299
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
G + G DG+++GWG+N +GQ
Sbjct: 300 LGDEGFRVGGGIQWALAADGKLYGWGWNKFGQ 331
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 162/399 (40%), Gaps = 75/399 (18%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG-TLF 84
WG GQ G G +P L P G S + CG +HT A + + L+
Sbjct: 44 WGRGEDGQLGH-GDAEDRPVPTVLTAAFDDAPGGVASV---VICGADHTTAYSDEELQLY 99
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGTISTSR 143
+WG +FG+LG G +P+ ++ LQ + I+CG +HC A
Sbjct: 100 SWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACGDSHCLAVTV----------AGH 149
Query: 144 LWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAWG 192
+ WG+NQ +L G + P I + ++ G+ H A++E G L WG
Sbjct: 150 VHSWGRNQNG---QLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWG 206
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
+ YG LG G + L +V + +K+ V+CG H+ VS +G +YT+
Sbjct: 207 WGRYGNLGLGDRDDRLIPEKV---------SSVNGQKMVLVACGWRHTITVSSSGSIYTY 257
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDG-------------IFIKD--VACGGVHSCA 297
G GQLGH + L+P ++ AL F+ D GG A
Sbjct: 258 GWSKYGQLGHGDFED---HLVPHKLEALKDTTISQEEAVELIFFFLGDEGFRVGGGIQWA 314
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLI----PNESDTYFRNIPILVVPNGVQLVACG 353
L + G LY WG ++ GQ+G+G S + PNE V VACG
Sbjct: 315 LAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQK--------------VVQVACG 360
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVD 392
HTL + WG + GQ + + P +D
Sbjct: 361 WRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMID 399
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 109/212 (51%), Gaps = 19/212 (8%)
Query: 165 PNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
P + +S G+ H VAL G++ +WG E GQLG G E P V+ A F D
Sbjct: 18 PERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHG-DAEDRPVPTVLT--AAFDDAP 74
Query: 225 PELEKITQVSCGEYHSAAVS-ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
+ + V CG H+ A S E ++Y+WG G G+LGH + S D P+ + AL G+
Sbjct: 75 GGVASV--VICGADHTTAYSDEELQLYSWGWGDFGRLGHGN--SSDV-FNPQPIQALQGV 129
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
I +ACG H A+T G +++WG +Q GQLGLG SL+P + F +
Sbjct: 130 RITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLG--NTEDSLLPQKIQA-FEGVR---- 182
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
V+++A G HT DG ++GWG+ YG
Sbjct: 183 ---VKMIAAGAEHTAAVTEDGDLYGWGWGRYG 211
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 147/343 (42%), Gaps = 65/343 (18%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG+ G+ G G + P+ + A R IACG H AV G
Sbjct: 98 LYSWGWGDFGRLGH-GNSSDVFNPQPIQ-------ALQGVRITQIACGDSHCLAVTVAGH 149
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ +WG N+ GQLG G E P+K++ + VK I+ GA TAA+ E DG +
Sbjct: 150 VHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTE----DGDLYG- 204
Query: 143 RLWVWGQ----NQGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
W WG+ G RL P + + V+CG H + +S G + +
Sbjct: 205 --WGWGRYGNLGLGDRDDRLI-----PEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTY 257
Query: 192 GYNEYGQLGRGITCEGLQGPRV--IKGYAKFLDEAPELEKI----TQVSCGEYHSAAVSE 245
G+++YGQLG G + L ++ +K +EA EL G A++
Sbjct: 258 GWSKYGQLGHGDFEDHLVPHKLEALKDTTISQEEAVELIFFFLGDEGFRVGGGIQWALAA 317
Query: 246 NGEVYTWGLGSVGQLG------HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT 299
+G++Y WG GQ+G HCS P +V + + VACG H+ ALT
Sbjct: 318 DGKLYGWGWNKFGQVGVGDNEDHCS---------PVQVNFPNEQKVVQVACGWRHTLALT 368
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
+++WG +GQLG G + RNIP ++
Sbjct: 369 EAKNVFSWGRGTSGQLGHG-------------EIVDRNIPKMI 398
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 93/212 (43%), Gaps = 24/212 (11%)
Query: 214 IKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL 273
+ G + + EAPE + +S G HS A+ G V +WG G GQLGH GD E
Sbjct: 7 VAGDDEAVPEAPE-RSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGH-----GDAEDR 60
Query: 274 PRRVV---ALD---GIFIKDVACGGVHSCALTSKG-ALYAWGGSQAGQLGLGPQTRSFSL 326
P V A D G V CG H+ A + + LY+WG G+LG G + F+
Sbjct: 61 PVPTVLTAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNP 120
Query: 327 IPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAW 386
P ++ R + +ACG SH L G +H WG N GQ + +
Sbjct: 121 QPIQALQGVR----------ITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSL 170
Query: 387 YPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
P + G V+ +AAG H+A + + L
Sbjct: 171 LPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDL 202
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 10/99 (10%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLR-IPKQLPPELFGCPAGANSRWLDIACGHEHTA 75
+ A +Y WG+N GQ G E + P E + + +ACG HT
Sbjct: 315 LAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNE---------QKVVQVACGWRHTL 365
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSE 114
A+ +F+WG GQLG G R P+ + L S+
Sbjct: 366 ALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDALSSD 404
>gi|296486676|tpg|DAA28789.1| TPA: hect domain and RLD 6-like isoform 2 [Bos taurus]
Length = 1016
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 124/241 (51%), Gaps = 19/241 (7%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ VSCG H +A+ G + AWG GQLG G E P+ IK A
Sbjct: 77 VALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGI-------- 128
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
KI QV+CG YHS A+SE+G+V++WG S GQLG + + P+RV +L+GI + V
Sbjct: 129 KIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQV 186
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN-GV 347
A GG HS AL+ G + WG + AGQL L N ++ + I + GV
Sbjct: 187 AAGGHHSFALSLSGTSFGWGSNSAGQLALSGN--------NAPVQRYKPVSIGALKTLGV 238
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH 407
++CG+ HT V +DG++ +G NSYGQ ++ + P V+ G V ++ G H
Sbjct: 239 VSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQIDCGSDH 298
Query: 408 S 408
+
Sbjct: 299 T 299
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 99/326 (30%), Positives = 147/326 (45%), Gaps = 45/326 (13%)
Query: 58 AGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFV 116
AG N+ L A G H+ + SDGT+ + G N GQLG GT G + PE++ L++ V
Sbjct: 20 AGGNT-LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRG-EQPERIPALETLNV 77
Query: 117 KSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFP--RLFWGAFTPNTI------ 168
+SCG + A+ R++ WG F P I
Sbjct: 78 ALVSCGKEHSLAVCH---------KGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGI 128
Query: 169 -ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL 227
I QV+CG H VALSE G + +WG N +GQLG G P+ ++ L+ P
Sbjct: 129 KIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRS----LEGIP-- 182
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+ QV+ G +HS A+S +G + WG S GQL + + P + AL + +
Sbjct: 183 --LAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVS 240
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPN 345
++CG H+ LT G ++ +G + GQLG P T + P LV +
Sbjct: 241 ISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDP-------------TAEKRGPQLVERIEG 287
Query: 346 GVQLVACGHSHTLVYM-RDGRIHGWG 370
V + CG HTL Y+ G++ +G
Sbjct: 288 LVSQIDCGSDHTLAYIYTTGQVVSFG 313
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 116/252 (46%), Gaps = 45/252 (17%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG GQ G + IPK++ A + + +ACGH H+ A++
Sbjct: 93 KGRVFAWGAASEGQLGIGEFKETTFIPKKI-------KTLAGIKIIQVACGHYHSVALSE 145
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG +F+WG N GQLG G E + P++V+ L+ + ++ G H + A++ + G
Sbjct: 146 DGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFG- 204
Query: 139 ISTSRLWVWGQN-------QGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSE 184
WG N G+N P + P +I + +SCG H L++
Sbjct: 205 --------WGSNSAGQLALSGNNAP---VQRYKPVSIGALKTLGVVSISCGYKHTAVLTQ 253
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-V 243
G + +G N YGQLG T E +GP++++ ++Q+ CG H+ A +
Sbjct: 254 DGKVFTFGDNSYGQLGHDPTAEK-RGPQLVERIEGL---------VSQIDCGSDHTLAYI 303
Query: 244 SENGEVYTWGLG 255
G+V ++G G
Sbjct: 304 YTTGQVVSFGRG 315
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 62/150 (41%), Gaps = 12/150 (8%)
Query: 266 QSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
++G + L R V G + A G HS L S G + + G + GQLG R
Sbjct: 6 RAGGRRPLRERQVCAGGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRG-- 63
Query: 326 LIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ-AANEKSTY 384
IP L N V LV+CG H+L GR+ WG S GQ E
Sbjct: 64 -------EQPERIPALETLN-VALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKET 115
Query: 385 AWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ P + G ++ ++A G HS L++
Sbjct: 116 TFIPKKIKTLAGIKIIQVACGHYHSVALSE 145
>gi|332027112|gb|EGI67208.1| Putative E3 ubiquitin-protein ligase HERC2 [Acromyrmex echinatior]
Length = 4853
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 118/411 (28%), Positives = 177/411 (43%), Gaps = 97/411 (23%)
Query: 12 RPVDNIPAKSAIYVWGYNHSGQT-GRKGRERQLRI----PKQLPP--------------- 51
R VD P +SA+YVWG N Q G KG + +L + +L P
Sbjct: 3003 RSVDTPPQQSAVYVWGLNDKDQLGGLKGSKIKLPVYSETLSKLKPIHIAGGSKTLFIVSQ 3062
Query: 52 --ELFGCPAGANSRW------------------------LDIACGHEHTAAVASDGTLFT 85
+L+ C G N R + + G +H A+ DG +F+
Sbjct: 3063 EGKLYACGEGTNGRLGLGDDNNMCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFS 3122
Query: 86 WGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLW 145
WG E G+LG G P+ ++ L+S+ ++ I+CG+ +AAIA S L+
Sbjct: 3123 WGEGEDGKLGHGNCISLDKPKLIEVLKSKRIRDIACGSGHSAAIA---------SNGELY 3173
Query: 146 VWGQNQGSNFPRLFWGAFTPNT-----------IICQVSCGS--VHVVALSECGLLQAWG 192
WG + + RL G T + QV+CGS +AL+ G + +WG
Sbjct: 3174 TWGLGE---YGRLGHGDTITQTRPKLVQALIGHRVVQVACGSRDAQTMALTTDGYVYSWG 3230
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
++G+LGRG +G P ++ + QV CG S A+++ GEV+TW
Sbjct: 3231 DGDFGKLGRG-GSDGCYTPLLVDRLNNL--------GVIQVECGAQFSLALTKYGEVWTW 3281
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G G +LGH + K P V L G I VA G +H A+T G +YAWG +
Sbjct: 3282 GKGDYFRLGHGNDHHVRK---PTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDH 3338
Query: 313 GQLGLGPQT--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
GQ G G + R SL+ + D V V+CG SH++ ++
Sbjct: 3339 GQQGNGTTSVNRKPSLVHDLEDAR------------VNRVSCGSSHSIAWV 3377
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 105/406 (25%), Positives = 177/406 (43%), Gaps = 64/406 (15%)
Query: 22 AIYVWGYNHSGQTG-RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
AIY WG+NH GQ G +G + +L P C + + R + +A G + AV +D
Sbjct: 3995 AIYGWGHNHRGQLGGLEGPKVKLPAP---------CESLSALRPIQLAGGEQTLFAVTAD 4045
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDG 137
G +++ G G+LG G + P ++ +Q F+K ++ G HC A +E
Sbjct: 4046 GKIYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSE------ 4099
Query: 138 TISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
++ WG+ P+L I ++CG H A++ G
Sbjct: 4100 ----GHVYSWGEGDDGKLGHGNKVSYDRPKLIEDLL--GVEIVDIACGGHHSAAITSAGW 4153
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSE 245
L WG YG+LG G + + L+ P+V++ + K+ V+C G+ + V++
Sbjct: 4154 LYTWGKGRYGRLGHGDSDDQLR-PKVVEALQDY--------KVIDVACGSGDAQTLCVTD 4204
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+ V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4205 DDNVWSWGDGDYGKLGR---GGSDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVY 4261
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRD 363
WG +LG G +D + R + G ++ +A G H +
Sbjct: 4262 TWGKGDYHRLGHG------------TDDHVRRPRKVAALQGKKIISIATGSLHCVACSDK 4309
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
G + WG N GQ + ++ P V G ++ ++A G H+
Sbjct: 4310 GEVFTWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAHT 4355
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 150/329 (45%), Gaps = 45/329 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G G + PK L +L G +DIACG H+AA+ S G
Sbjct: 4102 VYSWGEGDDGKLGH-GNKVSYDRPK-LIEDLLGV------EIVDIACGGHHSAAITSAGW 4153
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG G + + P+ V+ LQ V ++CG+ + +++
Sbjct: 4154 LYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDN------ 4207
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
+W WG R G P I + +V CGS VAL+ G + WG
Sbjct: 4208 -VWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKG 4266
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G T + ++ PR + A + +KI ++ G H A S+ GEV+TWG
Sbjct: 4267 DYHRLGHG-TDDHVRRPRKVA--------ALQGKKIISIATGSLHCVACSDKGEVFTWGD 4317
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G I VACG H+ AW ++A Q
Sbjct: 4318 NDEGQLGDGTTSALHR---PRLVHALQGKKITRVACGSAHT---------LAWSTAKATQ 4365
Query: 315 LGLGPQT-RSFSLIPNESDTYFRNIPILV 342
+ T + L+ + S + RN +L+
Sbjct: 4366 SRMPASTPMEYDLVKDLSYSVLRNRLVLL 4394
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 161/360 (44%), Gaps = 59/360 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A IY GY +G+ G G + + P L + + ++ G +H A
Sbjct: 4042 VTADGKIYSTGYGAAGRLGIGGTD------SVMIPTLLESIQHVFIKKVAVSSGGKHCIA 4095
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
++S+G +++WG + G+LG G + P+ ++ L + I+CG H +AAI
Sbjct: 4096 LSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAIT------ 4149
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGS--VHVVALS 183
S L+ WG+ + + RL G P + + V+CGS + ++
Sbjct: 4150 ---SAGWLYTWGKGR---YGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVT 4203
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ + +WG +YG+LGRG +G + P I A + +V CG S A+
Sbjct: 4204 DDDNVWSWGDGDYGKLGRG-GSDGCKVPLKIDSLAGL--------GVVKVECGSQFSVAL 4254
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+ +G VYTWG G +LGH + D PR+V AL G I +A G +H A + KG
Sbjct: 4255 TRSGAVYTWGKGDYHRLGH---GTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGE 4311
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 360
++ WG + GQLG G T + P LV + VACG +HTL +
Sbjct: 4312 VFTWGDNDEGQLGDGT-------------TSALHRPRLVHALQGKKITRVACGSAHTLAW 4358
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 138/275 (50%), Gaps = 39/275 (14%)
Query: 72 EHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
+H A+ DG +++WG + G+LG G P+ ++ L + + I+CG+ +AA++
Sbjct: 578 KHYLALTQDGCVYSWGNGDGGRLGHGDTISYDEPKLIEALLEKNIIFIACGSTYSAALS- 636
Query: 132 PRENDGTISTSRLWVWGQNQGSNFPRLFWGAF----TPNTI-------ICQVSCGS--VH 178
+ L+ WG+ N+ RL G F TP + + V+CGS
Sbjct: 637 --------ANGELYTWGRG---NYGRLGHGNFDDVMTPTLVTTLKGHTVVHVACGSGDSQ 685
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
+ ++ G++ +WG +YG+LGRG T +G + P+++ K LD + +V CG
Sbjct: 686 TLCVTASGIVFSWGDGDYGKLGRGGT-DGSKTPKIVD---KLLD-----INVVKVFCGSQ 736
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
SAA++ +GEVYTWG G +LGH S + P+ + +L +KD++ G H AL
Sbjct: 737 FSAALTAHGEVYTWGKGDAYRLGH---GSEEHVRYPKVIESLRDRKVKDLSVGTTHILAL 793
Query: 299 TSKGALYAWGGSQAGQLG--LGPQTRSFSLIPNES 331
T +Y WG + GQ+ LGP +L P S
Sbjct: 794 TEDQFVYGWGRNDYGQIDPTLGPIISEPTLCPTLS 828
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 128/280 (45%), Gaps = 42/280 (15%)
Query: 129 IAEPRENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVV 180
IA R D S ++VWG N +GS + ++ GS +
Sbjct: 2999 IAIQRSVDTPPQQSAVYVWGLNDKDQLGGLKGSKIKLPVYSETLSKLKPIHIAGGSKTLF 3058
Query: 181 ALSECGLLQAWGYNEYGQLGRGI---TCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
+S+ G L A G G+LG G CE P+ I ++F+ ++K+ V G
Sbjct: 3059 IVSQEGKLYACGEGTNGRLGLGDDNNMCE----PKAIPFLSQFV-----IKKVA-VHSGG 3108
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
H+ A++++G+V++WG G G+LGH + S DK P+ + L I+D+ACG HS A
Sbjct: 3109 KHALALTQDGKVFSWGEGEDGKLGHGNCISLDK---PKLIEVLKSKRIRDIACGSGHSAA 3165
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV---VPNGVQLVACG- 353
+ S G LY WG + G+LG G DT + P LV + + V VACG
Sbjct: 3166 IASNGELYTWGLGEYGRLGHG-------------DTITQTRPKLVQALIGHRVVQVACGS 3212
Query: 354 -HSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVD 392
+ T+ DG ++ WG +G+ S + P VD
Sbjct: 3213 RDAQTMALTTDGYVYSWGDGDFGKLGRGGSDGCYTPLLVD 3252
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 144/342 (42%), Gaps = 36/342 (10%)
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G ++ WG N GQLG K P + L + ++ G A+ DG I
Sbjct: 3994 GAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVTA----DGKIY 4049
Query: 141 TS------RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
++ RL + G + P L VS G H +ALS G + +WG
Sbjct: 4050 STGYGAAGRLGIGGTD-SVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEG 4108
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+ G+LG G +V K +++ +E I ++CG +HSAA++ G +YTWG
Sbjct: 4109 DDGKLG--------HGNKVSYDRPKLIEDLLGVE-IVDIACGGHHSAAITSAGWLYTWGK 4159
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQA 312
G G+LGH D +L P+ V AL + DVACG + +T +++WG
Sbjct: 4160 GRYGRLGH---GDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDY 4216
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYN 372
G+LG G +P + D+ + GV V CG ++ R G ++ WG
Sbjct: 4217 GKLGRGGS--DGCKVPLKIDS--------LAGLGVVKVECGSQFSVALTRSGAVYTWGKG 4266
Query: 373 SYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
Y + + + P V G ++ +A G H +D
Sbjct: 4267 DYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSD 4308
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 102/228 (44%), Gaps = 36/228 (15%)
Query: 156 PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVI- 214
P+L N I ++CGS + ALS G L WG YG+LG G + + P ++
Sbjct: 611 PKLIEALLEKNIIF--IACGSTYSAALSANGELYTWGRGNYGRLGHG-NFDDVMTPTLVT 667
Query: 215 --KGYAKFLDEAPELEKITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK 270
KG+ + V+CG + + V+ +G V++WG G G+LG D
Sbjct: 668 TLKGHT-----------VVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGR---GGTDG 713
Query: 271 ELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQ--TRSFSLIP 328
P+ V L I + V CG S ALT+ G +Y WG A +LG G + R +I
Sbjct: 714 SKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIE 773
Query: 329 NESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+ D +++ + G +H L D ++GWG N YGQ
Sbjct: 774 SLRDRKVKDLSV------------GTTHILALTEDQFVYGWGRNDYGQ 809
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 120/253 (47%), Gaps = 28/253 (11%)
Query: 165 PNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
P T+I + G H +AL++ G + +WG + G+LG G T P++I+
Sbjct: 567 PITMIASHADGK-HYLALTQDGCVYSWGNGDGGRLGHGDTI-SYDEPKLIEAL------- 617
Query: 225 PELEK-ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
LEK I ++CG +SAA+S NGE+YTWG G+ G+LGH + D + P V L G
Sbjct: 618 --LEKNIIFIACGSTYSAALSANGELYTWGRGNYGRLGHGNF---DDVMTPTLVTTLKGH 672
Query: 284 FIKDVACGGVHSCAL--TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL 341
+ VACG S L T+ G +++WG G+LG G S + P D +I ++
Sbjct: 673 TVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKT--PKIVDKLL-DINVV 729
Query: 342 VVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRK 400
V G Q A +H G ++ WG + + + YP ++ +V+
Sbjct: 730 KVFCGSQFSAALTAH-------GEVYTWGKGDAYRLGHGSEEHVRYPKVIESLRDRKVKD 782
Query: 401 LAAGGGHSAVLAD 413
L+ G H L +
Sbjct: 783 LSVGTTHILALTE 795
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 27/227 (11%)
Query: 190 AWGYNEYGQLGRGITCEGLQGPRV-IKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG N+ QLG GL+G ++ + Y++ L + K ++ G VS+ G+
Sbjct: 3016 VWGLNDKDQLG------GLKGSKIKLPVYSETLSKL----KPIHIAGGSKTLFIVSQEGK 3065
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHSCALTSKGALYA 306
+Y G G+ G+LG L + P+ + L IK VA GG H+ ALT G +++
Sbjct: 3066 LYACGEGTNGRLG---LGDDNNMCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFS 3122
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRI 366
WG + G+LG G SL + ++ ++ +ACG H+ +G +
Sbjct: 3123 WGEGEDGKLGHG---NCISLDKPKLIEVLKS-------KRIRDIACGSGHSAAIASNGEL 3172
Query: 367 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLA 412
+ WG YG+ + + P V +G V ++A G + +A
Sbjct: 3173 YTWGLGEYGRLGHGDTITQTRPKLVQALIGHRVVQVACGSRDAQTMA 3219
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 74/188 (39%), Gaps = 32/188 (17%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
I Q+ C E +S NG VY GS Q P+RV I +A
Sbjct: 526 IKQLCCTERALMILSLNGNVYNMYHGSETQ-------------YPQRVHGFSDKPITMIA 572
Query: 290 --CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV---VP 344
G H ALT G +Y+WG G+LG G DT + P L+ +
Sbjct: 573 SHADGKHYLALTQDGCVYSWGNGDGGRLGHG-------------DTISYDEPKLIEALLE 619
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAA 403
+ +ACG +++ +G ++ WG +YG+ + P+ V G V +A
Sbjct: 620 KNIIFIACGSTYSAALSANGELYTWGRGNYGRLGHGNFDDVMTPTLVTTLKGHTVVHVAC 679
Query: 404 GGGHSAVL 411
G G S L
Sbjct: 680 GSGDSQTL 687
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 12/170 (7%)
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G +Y WG GQLG G K LP +L + +A G A+T+ G +Y
Sbjct: 3993 SGAIYGWGHNHRGQLGGL---EGPKVKLPAPCESLSALRPIQLAGGEQTLFAVTADGKIY 4049
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
+ G AG+LG+G T S +IP T +I + + V+ G H + +G
Sbjct: 4050 STGYGAAGRLGIG-GTDSV-MIP----TLLESIQHVFIKKVA--VSSGGKHCIALSSEGH 4101
Query: 366 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADA 414
++ WG G+ + P ++ +G E+ +A GG HSA + A
Sbjct: 4102 VYSWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITSA 4151
>gi|300798276|ref|NP_001179573.1| probable E3 ubiquitin-protein ligase HERC6 [Bos taurus]
Length = 1016
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 124/241 (51%), Gaps = 19/241 (7%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ VSCG H +A+ G + AWG GQLG G E P+ IK A
Sbjct: 77 VALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGI-------- 128
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
KI QV+CG YHS A+SE+G+V++WG S GQLG + + P+RV +L+GI + V
Sbjct: 129 KIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQV 186
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN-GV 347
A GG HS AL+ G + WG + AGQL L N ++ + I + GV
Sbjct: 187 AAGGHHSFALSLSGTSFGWGSNSAGQLALSGN--------NAPVQRYKPVSIGALKTLGV 238
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH 407
++CG+ HT V +DG++ +G NSYGQ ++ + P V+ G V ++ G H
Sbjct: 239 VSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQIDCGSDH 298
Query: 408 S 408
+
Sbjct: 299 T 299
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 99/326 (30%), Positives = 147/326 (45%), Gaps = 45/326 (13%)
Query: 58 AGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFV 116
AG N+ L A G H+ + SDGT+ + G N GQLG GT G + PE++ L++ V
Sbjct: 20 AGGNT-LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRG-EQPERIPALETLNV 77
Query: 117 KSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFP--RLFWGAFTPNTI------ 168
+SCG + A+ R++ WG F P I
Sbjct: 78 ALVSCGKEHSLAVCH---------KGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGI 128
Query: 169 -ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL 227
I QV+CG H VALSE G + +WG N +GQLG G P+ ++ L+ P
Sbjct: 129 KIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRS----LEGIP-- 182
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+ QV+ G +HS A+S +G + WG S GQL + + P + AL + +
Sbjct: 183 --LAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVS 240
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPN 345
++CG H+ LT G ++ +G + GQLG P T + P LV +
Sbjct: 241 ISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDP-------------TAEKRGPQLVERIEG 287
Query: 346 GVQLVACGHSHTLVYM-RDGRIHGWG 370
V + CG HTL Y+ G++ +G
Sbjct: 288 LVSQIDCGSDHTLAYIYTTGQVVSFG 313
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 116/252 (46%), Gaps = 45/252 (17%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG GQ G + IPK++ A + + +ACGH H+ A++
Sbjct: 93 KGRVFAWGAASEGQLGIGEFKETTFIPKKI-------KTLAGIKIIQVACGHYHSVALSE 145
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG +F+WG N GQLG G E + P++V+ L+ + ++ G H + A++ + G
Sbjct: 146 DGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFG- 204
Query: 139 ISTSRLWVWGQN-------QGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSE 184
WG N G+N P + P +I + +SCG H L++
Sbjct: 205 --------WGSNSAGQLALSGNNAP---VQRYKPVSIGALKTLGVVSISCGYKHTAVLTQ 253
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-V 243
G + +G N YGQLG T E +GP++++ ++Q+ CG H+ A +
Sbjct: 254 DGKVFTFGDNSYGQLGHDPTAEK-RGPQLVERIEGL---------VSQIDCGSDHTLAYI 303
Query: 244 SENGEVYTWGLG 255
G+V ++G G
Sbjct: 304 YTTGQVVSFGRG 315
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 62/150 (41%), Gaps = 12/150 (8%)
Query: 266 QSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
++G + L R V G + A G HS L S G + + G + GQLG R
Sbjct: 6 RAGGRRPLRERQVCAGGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRG-- 63
Query: 326 LIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ-AANEKSTY 384
IP L N V LV+CG H+L GR+ WG S GQ E
Sbjct: 64 -------EQPERIPALETLN-VALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKET 115
Query: 385 AWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ P + G ++ ++A G HS L++
Sbjct: 116 TFIPKKIKTLAGIKIIQVACGHYHSVALSE 145
>gi|334329483|ref|XP_003341232.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
[Monodelphis domestica]
Length = 1170
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 112/355 (31%), Positives = 169/355 (47%), Gaps = 38/355 (10%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++CG EHTA + + L+ +G+N +GQLG G++ P VK L+ E VK +CG + T
Sbjct: 40 LSCGDEHTALITGNSKLYMFGSNNWGQLGLGSKTTVNKPTCVKALKPEKVKIAACGRNHT 99
Query: 127 AAIAEPRENDGTI------STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVV 180
E +G + S +L + + + F + + FT I Q+S GS
Sbjct: 100 LVYTE----EGKVYAAGGNSEGQLGLGDTEERTTFQLVSF--FTAQHKIKQLSAGSNTSA 153
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
AL+E G+L WG N GQ+G V G I+ +SCG YHS
Sbjct: 154 ALTEDGVLFMWGDNSEGQIGLAEEANVCVPSEVTIGKP-----------ISWISCGYYHS 202
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
A V+ GE+YT+G G+LG S + +P+ V+ + G + VACGG H+ ALT
Sbjct: 203 AFVTTEGELYTFGEPENGKLG-LSPEQLKNHRIPQLVLGIPGK-VNQVACGGGHTVALTE 260
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+ +Y +G Q GQLGLG T F + + +N I Q +ACG +HT +
Sbjct: 261 E-EVYTFGLGQFGQLGLG--TFIFETSEPKVVKHLQNQKI-------QYIACGENHTALI 310
Query: 361 MRDGRIHGWGYNSYGQ--AANEKSTYAWYPSP-VDWCVGEVRKLAAGGGHSAVLA 412
G ++ +G +G+ E T + P+ ++ VR +A GG H V A
Sbjct: 311 SDTGHMYTFGDGRHGKLGLGQENFTNQFVPTLCSNFLKFIVRLVACGGCHMLVFA 365
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 123/278 (44%), Gaps = 39/278 (14%)
Query: 144 LWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
++ +G+++ N P FW N I +SCG H ++ L +G N +GQLG G
Sbjct: 14 VFTFGKSKFAENIPSKFW---LKNDIPAYLSCGDEHTALITGNSKLYMFGSNNWGQLGLG 70
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
+ P +K A + EK+ +CG H+ +E G+VY G S GQLG
Sbjct: 71 SKT-TVNKPTCVK--------ALKPEKVKIAACGRNHTLVYTEEGKVYAAGGNSEGQLGL 121
Query: 263 CSLQSGDKELLPRRVVALDGIF-----IKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GD E R L F IK ++ G S ALT G L+ WG + GQ+GL
Sbjct: 122 -----GDTE--ERTTFQLVSFFTAQHKIKQLSAGSNTSAALTEDGVLFMWGDNSEGQIGL 174
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ- 376
+ +P+E + + + ++CG+ H+ +G ++ +G G+
Sbjct: 175 AEEAN--VCVPSE----------VTIGKPISWISCGYYHSAFVTTEGELYTFGEPENGKL 222
Query: 377 -AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLAD 413
+ E+ P V G+V ++A GGGH+ L +
Sbjct: 223 GLSPEQLKNHRIPQLVLGIPGKVNQVACGGGHTVALTE 260
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 87/196 (44%), Gaps = 40/196 (20%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+++WG N GQ G E + +P ++ G P W I+CG+ H+A V ++G
Sbjct: 160 VLFMWGDNSEGQIGL-AEEANVCVPSEV---TIGKPIS----W--ISCGYYHSAFVTTEG 209
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF---VKSISCGAHCTAAIAEPRENDGT 138
L+T+G E G+LG E+ + H ++ QL V ++CG T A+ E
Sbjct: 210 ELYTFGEPENGKLGLSPEQLKNH--RIPQLVLGIPGKVNQVACGGGHTVALTE------- 260
Query: 139 ISTSRLWVWGQNQGSNFPRLFWGAFT------------PNTIICQVSCGSVHVVALSECG 186
++ +G Q F +L G F N I ++CG H +S+ G
Sbjct: 261 ---EEVYTFGLGQ---FGQLGLGTFIFETSEPKVVKHLQNQKIQYIACGENHTALISDTG 314
Query: 187 LLQAWGYNEYGQLGRG 202
+ +G +G+LG G
Sbjct: 315 HMYTFGDGRHGKLGLG 330
>gi|312622781|ref|YP_004024394.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203248|gb|ADQ46575.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
kronotskyensis 2002]
Length = 743
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 125/444 (28%), Positives = 188/444 (42%), Gaps = 97/444 (21%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I ++ WGYN GQ G G + IP ++ L A ++ G H+ A
Sbjct: 57 IKDDGTVWAWGYNGFGQLGN-GTYKDSCIPVRVKG-LKDVVA--------VSAGTFHSLA 106
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG+++ WG +GQ P KVK+L++ + +I+ G + A+ +D
Sbjct: 107 LKKDGSVWIWGHTNYGQRKSDVYRDFTTPVKVKELKN--IVAIAAGWDFSLAVG----SD 160
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI---------ICQVSCGSVHVVALSECGL 187
G++ W WG N N L G+ P+ + + VS G H +AL G
Sbjct: 161 GSV-----WAWGIN---NHGELGIGSLKPSAVPVKVKGLKDVVAVSAGLYHSLALKRDGT 212
Query: 188 LQAWGYNEYGQLGRGITCE-GLQGPRVIKGYAKFLDEAP--------------------- 225
+ +WGYNE G+LG T + + P +KG + + +
Sbjct: 213 VWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSDVIAISAGGFHSIALNKDGAVWIWGGGI 272
Query: 226 -----------------ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSG 268
L K+ ++ G HS A+ ++G V+ WG S G LG G
Sbjct: 273 IEKNGKIDNSYIPVRIRWLNKVVAIAAGYRHSIALKDDGTVWVWGHNSYGVLGS---NVG 329
Query: 269 DKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIP 328
+ LP +V L + VA G +HS ALT G ++AWG + GQ LG + SFSL
Sbjct: 330 EHSFLPVQVKGLKNVVA--VAAGRLHSVALTKNGTIWAWGNNAFGQ--LGRENNSFSL-- 383
Query: 329 NESDTYFRNIPILVV-PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWY 387
N+P V + V +A G SHTL RDG + WG N+ GQ N ++
Sbjct: 384 --------NLPYKVKWLDNVVAIAAGGSHTLAIKRDGTVWSWGANNKGQLGNGTYKSSYI 435
Query: 388 PSPVDWCVGEVRK---LAAGGGHS 408
P+ CV + K + AG HS
Sbjct: 436 PT----CVKGLNKAVLVEAGSQHS 455
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 166/360 (46%), Gaps = 48/360 (13%)
Query: 59 GANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKS 118
G N + + G HT A+ DGT++ WG N FGQLG+GT + P +VK L+ V +
Sbjct: 39 GENFKVISSGAGSLHTLAIKDDGTVWAWGYNGFGQLGNGTYKDSCIPVRVKGLKD--VVA 96
Query: 119 ISCGAHCTAAIAEPRENDGTISTSRLWVWGQ-NQGSNFPRLFWGAFTPNTI-----ICQV 172
+S G + A+ + DG++ W+WG N G ++ TP + I +
Sbjct: 97 VSAGTFHSLAL----KKDGSV-----WIWGHTNYGQRKSDVYRDFTTPVKVKELKNIVAI 147
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
+ G +A+ G + AWG N +G+LG G + + P +KG L+ +
Sbjct: 148 AAGWDFSLAVGSDGSVWAWGINNHGELGIG-SLKPSAVPVKVKG----------LKDVVA 196
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
VS G YHS A+ +G V++WG G+LG+ + +P RV L + ++ GG
Sbjct: 197 VSAGLYHSLALKRDGTVWSWGYNEDGELGNRPTEDYTVS-VPVRVKGLSDVIA--ISAGG 253
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQLVA 351
HS AL GA++ WGG +I IP+ + N V +A
Sbjct: 254 FHSIALNKDGAVWIWGG---------------GIIEKNGKIDNSYIPVRIRWLNKVVAIA 298
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
G+ H++ DG + WG+NSYG + +++ P V + V +AAG HS L
Sbjct: 299 AGYRHSIALKDDGTVWVWGHNSYGVLGSNVGEHSFLPVQVK-GLKNVVAVAAGRLHSVAL 357
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 175/411 (42%), Gaps = 86/411 (20%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLD----IACGHEHTAAVA 78
I+ WG N GQ GR+ L +P ++ +WLD IA G HT A+
Sbjct: 363 IWAWGNNAFGQLGRENNSFSLNLPYKV-------------KWLDNVVAIAAGGSHTLAIK 409
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DGT+++WGAN GQLG+GT + P VK L + + G+ + A+ + DGT
Sbjct: 410 RDGTVWSWGANNKGQLGNGTYKSSYIPTCVKGLNKAVL--VEAGSQHSLAV----DKDGT 463
Query: 139 ISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-------------ICQVSCGSVHVVALSEC 185
+ WVWG F W I I +++ G +++ L +
Sbjct: 464 V-----WVWG------FIESVWSEKNTKDILSPLPIKIGKLNDITEIAGGLDYILVLRKD 512
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + G + Y R T + V K L ++ + ++ G +HS AV
Sbjct: 513 GNIWGCGNDFYF---RKFTDSSVS--SVTK-----LIRLDNIKNVRSIAAGYFHSLAVRT 562
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKEL----LPRRVVALDGIFIKDVACGGVHSCALTSK 301
+G V++WG +L + +K L P ++ L G+ VA G HS AL
Sbjct: 563 DGTVWSWG--------DTNLDNKEKYLNFSEKPVKIKGLSGVV--KVAAGKYHSLALKKD 612
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV-PNGVQLVACGHSHTLVY 360
G +++WG + GQLG G + SF +P+ V N V +A G H++
Sbjct: 613 GTVWSWGYNAYGQLGNGTRETSF-------------VPVRVKGLNNVVAIAAGDYHSMAL 659
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
+DG + WG N GQ ++ P V+ + V +AAG HS L
Sbjct: 660 KKDGTVWVWGSNIRGQLGRRNIEFSTVPLKVE-KLDNVVAIAAGDTHSVAL 709
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 165/363 (45%), Gaps = 68/363 (18%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+++ WG N+ G+ G + P +P ++ G + ++ G H+ A+ DG
Sbjct: 162 SVWAWGINNHGELGIGSLK-----PSAVPVKVKGLKDV-----VAVSAGLYHSLALKRDG 211
Query: 82 TLFTWGANEFGQLGDGTEEGR--KHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
T+++WG NE G+LG+ E P +VK L V +IS G + A+ DG +
Sbjct: 212 TVWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSD--VIAISAGGFHSIAL----NKDGAV 265
Query: 140 STSRLWVW--------GQNQGSNFP-RLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
W+W G+ S P R+ W N ++ ++ G H +AL + G +
Sbjct: 266 -----WIWGGGIIEKNGKIDNSYIPVRIRW----LNKVVA-IAAGYRHSIALKDDGTVWV 315
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG+N YG LG + P +KG L+ + V+ G HS A+++NG ++
Sbjct: 316 WGHNSYGVLGSNVGEHSFL-PVQVKG----------LKNVVAVAAGRLHSVALTKNGTIW 364
Query: 251 TWGLGSVGQLGHCSLQSGDKEL-LPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
WG + GQLG ++ L LP +V LD + +A GG H+ A+ G +++WG
Sbjct: 365 AWGNNAFGQLGR---ENNSFSLNLPYKVKWLDNVVA--IAAGGSHTLAIKRDGTVWSWGA 419
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV-PNGVQLVACGHSHTLVYMRDGRIHG 368
+ GQLG G S+ IP V N LV G H+L +DG +
Sbjct: 420 NNKGQLGNGTYKSSY-------------IPTCVKGLNKAVLVEAGSQHSLAVDKDGTVWV 466
Query: 369 WGY 371
WG+
Sbjct: 467 WGF 469
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 117/450 (26%), Positives = 184/450 (40%), Gaps = 114/450 (25%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLD----IACGHEHTAAV 77
A+++WG G + G+ IP ++ RWL+ IA G+ H+ A+
Sbjct: 264 AVWIWG---GGIIEKNGKIDNSYIPVRI-------------RWLNKVVAIAAGYRHSIAL 307
Query: 78 ASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG 137
DGT++ WG N +G LG E P +VK L++ V +++ G + A+ + +G
Sbjct: 308 KDDGTVWVWGHNSYGVLGSNVGEHSFLPVQVKGLKN--VVAVAAGRLHSVALTK----NG 361
Query: 138 TISTSRLWVWGQNQGSNFPRLFWGAFTPNT--------IICQVSCGSVHVVALSECGLLQ 189
TI W WG N R +F+ N + ++ G H +A+ G +
Sbjct: 362 TI-----WAWGNNAFGQLGREN-NSFSLNLPYKVKWLDNVVAIAAGGSHTLAIKRDGTVW 415
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
+WG N GQLG G T + P +KG L K V G HS AV ++G V
Sbjct: 416 SWGANNKGQLGNG-TYKSSYIPTCVKG----------LNKAVLVEAGSQHSLAVDKDGTV 464
Query: 250 YTWGLG------------------SVGQLGHCSLQSG--DKELLPRR------------- 276
+ WG +G+L + +G D L+ R+
Sbjct: 465 WVWGFIESVWSEKNTKDILSPLPIKIGKLNDITEIAGGLDYILVLRKDGNIWGCGNDFYF 524
Query: 277 -------------VVALDGIF-IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
++ LD I ++ +A G HS A+ + G +++WG +
Sbjct: 525 RKFTDSSVSSVTKLIRLDNIKNVRSIAAGYFHSLAVRTDGTVWSWGDT------------ 572
Query: 323 SFSLIPNESDTYFRNIPILVV-PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEK 381
+L E F P+ + +GV VA G H+L +DG + WGYN+YGQ N
Sbjct: 573 --NLDNKEKYLNFSEKPVKIKGLSGVVKVAAGKYHSLALKKDGTVWSWGYNAYGQLGNGT 630
Query: 382 STYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
++ P V + V +AAG HS L
Sbjct: 631 RETSFVPVRVK-GLNNVVAIAAGDYHSMAL 659
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 175/398 (43%), Gaps = 65/398 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WGYN G+ G + E +P + G S + I+ G H+ A+ DG
Sbjct: 213 VWSWGYNEDGELGNRPTEDY---TVSVPVRVKGL-----SDVIAISAGGFHSIALNKDGA 264
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG + +G + P +++ L V +I+ G + A+ ++DGT+
Sbjct: 265 VWIWGGGIIEK--NGKIDNSYIPVRIRWLNK--VVAIAAGYRHSIAL----KDDGTV--- 313
Query: 143 RLWVWGQNQ----GSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECGLLQAWGY 193
WVWG N GSN +F P + + V+ G +H VAL++ G + AWG
Sbjct: 314 --WVWGHNSYGVLGSNVGE---HSFLPVQVKGLKNVVAVAAGRLHSVALTKNGTIWAWGN 368
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
N +GQLGR L P +K L+ + ++ G H+ A+ +G V++WG
Sbjct: 369 NAFGQLGRENNSFSLNLPYKVK----------WLDNVVAIAAGGSHTLAIKRDGTVWSWG 418
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
+ GQLG+ + +S +P V L+ + V G HS A+ G ++ WG ++
Sbjct: 419 ANNKGQLGNGTYKS---SYIPTCVKGLNKAVL--VEAGSQHSLAVDKDGTVWVWGFIES- 472
Query: 314 QLGLGPQTRSFSLIPNESDT--YFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWG 370
+ +E +T +PI + N + +A G + LV +DG I G G
Sbjct: 473 -------------VWSEKNTKDILSPLPIKIGKLNDITEIAGGLDYILVLRKDGNIWGCG 519
Query: 371 YNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
+ Y + + S + + VR +AAG HS
Sbjct: 520 NDFYFRKFTDSSVSSVTKLIRLDNIKNVRSIAAGYFHS 557
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 142/347 (40%), Gaps = 90/347 (25%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I ++ WG N+ GQ G G + IP C G N L + G +H+ A
Sbjct: 408 IKRDGTVWSWGANNKGQLGN-GTYKSSYIPT--------CVKGLNKAVL-VEAGSQHSLA 457
Query: 77 VASDGTLFTWGANE------------------FGQLGDGTEEG----------------- 101
V DGT++ WG E G+L D TE
Sbjct: 458 VDKDGTVWVWGFIESVWSEKNTKDILSPLPIKIGKLNDITEIAGGLDYILVLRKDGNIWG 517
Query: 102 -------RKHPE-------KVKQLQS-EFVKSISCGAHCTAAIAEPRENDGTISTSRLWV 146
RK + K+ +L + + V+SI+ G + A+ DGT+ W
Sbjct: 518 CGNDFYFRKFTDSSVSSVTKLIRLDNIKNVRSIAAGYFHSLAV----RTDGTV-----WS 568
Query: 147 WGQNQGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGR 201
WG N + + P I + +V+ G H +AL + G + +WGYN YGQLG
Sbjct: 569 WGDTNLDNKEKYLNFSEKPVKIKGLSGVVKVAAGKYHSLALKKDGTVWSWGYNAYGQLGN 628
Query: 202 GITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG 261
G T E P +KG L + ++ G+YHS A+ ++G V+ WG GQLG
Sbjct: 629 G-TRETSFVPVRVKG----------LNNVVAIAAGDYHSMALKKDGTVWVWGSNIRGQLG 677
Query: 262 HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
+++ +P +V LD + +A G HS AL G ++ WG
Sbjct: 678 RRNIEF---STVPLKVEKLDNVVA--IAAGDTHSVALKKDGTVWVWG 719
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 39/199 (19%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEE---GRKHPEKVKQLQSEFVKSISCGA 123
IA G+ H+ AV +DGT+++WG D E+ + P K+K L V ++ G
Sbjct: 550 IAAGYFHSLAVRTDGTVWSWGDTNL----DNKEKYLNFSEKPVKIKGLSG--VVKVAAGK 603
Query: 124 HCTAAIAEPRENDGTISTSRLWVWGQN---QGSNFPRLFWGAFTPNTI-----ICQVSCG 175
+ + A+ + DGT+ W WG N Q N R +F P + + ++ G
Sbjct: 604 YHSLAL----KKDGTV-----WSWGYNAYGQLGNGTRET--SFVPVRVKGLNNVVAIAAG 652
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
H +AL + G + WG N GQLGR R I+ ++ + +L+ + ++
Sbjct: 653 DYHSMALKKDGTVWVWGSNIRGQLGR----------RNIE-FSTVPLKVEKLDNVVAIAA 701
Query: 236 GEYHSAAVSENGEVYTWGL 254
G+ HS A+ ++G V+ WG+
Sbjct: 702 GDTHSVALKKDGTVWVWGI 720
>gi|301113129|ref|XP_002998335.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262112629|gb|EEY70681.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 2353
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 171/364 (46%), Gaps = 37/364 (10%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
+ I G+EHT + +DG +FT G N+ GQ G G H ++ ++ S S AH
Sbjct: 598 IQIGAGNEHTVVLTADGKVFTCGYNDNGQCGQGGTARVSHLSEIPKMDSG-----SSQAH 652
Query: 125 ----CTAAIAEPRENDGTISTSRLWVWGQ-----NQGSNFPRLFWGAFTPNTIICQVSCG 175
C I DG ++T GQ + P++ N I+ VSC
Sbjct: 653 AYNGCEHTILV--STDGRVATCGYNYRGQLGHGNTTSESVPKIIRSL--ENKIVRLVSCS 708
Query: 176 SVHVVALSECGLLQ---AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
H V E G LQ +G N+YGQLG + + R I + + L + ++I
Sbjct: 709 YYHTVLACEDGNLQNLYTFGRNDYGQLGHNDSID-----RKIPQFVEALSD----QQIVS 759
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACG 291
V+CG+YH+ V+ +G+ + +G GQLG + + + +L P +V L+ ++ CG
Sbjct: 760 VACGQYHTMVVTASGKAFAFGKNDYGQLG---IDTMENQLAPVQVRGGLERQECLEIRCG 816
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV- 350
H+ AL S L+A+G + GQLGLG S + F N ++ G +V
Sbjct: 817 YYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVR 876
Query: 351 -ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHS 408
ACG HT+ +G ++ +G N++GQ +T YP P+D VG+ V +AAG H+
Sbjct: 877 IACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDFVGKRVALVAAGFYHT 936
Query: 409 AVLA 412
VL
Sbjct: 937 VVLT 940
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 164/362 (45%), Gaps = 52/362 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++ GYN +GQ G+ G R + + P++ + A++ G EHT
Sbjct: 610 LTADGKVFTCGYNDNGQCGQGGTARVSHLSE--IPKMDSGSSQAHA-----YNGCEHTIL 662
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V++DG + T G N GQLG G P+ ++ L+++ V+ +SC + T E D
Sbjct: 663 VSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLACE----D 718
Query: 137 GTISTSRLWVWGQNQ----GSN------FPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
G + L+ +G+N G N P+ F A + I+ V+CG H + ++ G
Sbjct: 719 GNLQN--LYTFGRNDYGQLGHNDSIDRKIPQ-FVEALSDQQIVS-VACGQYHTMVVTASG 774
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
A+G N+YGQLG T E P ++G E ++ ++ CG YH+ A+
Sbjct: 775 KAFAFGKNDYGQLGID-TMENQLAPVQVRG-------GLERQECLEIRCGYYHTIALCSG 826
Query: 247 GEVYTWGLGSVGQLG--------HCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHSCA 297
++ +G GQLG +LQ + R++ L+G I +ACG H+ A
Sbjct: 827 AHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIA 886
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT 357
++ G +Y +G + GQLG G T P + V V LVA G HT
Sbjct: 887 VSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDD----------FVGKRVALVAAGFYHT 936
Query: 358 LV 359
+V
Sbjct: 937 VV 938
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 93/217 (42%), Gaps = 36/217 (16%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I Q+ G+ H V L+ G + GYN+ GQ G+G T L E P+++
Sbjct: 597 IIQIGAGNEHTVVLTADGKVFTCGYNDNGQCGQGGTAR-----------VSHLSEIPKMD 645
Query: 229 ---KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFI 285
G H+ VS +G V T G GQLGH + S E +P+ + +L+ +
Sbjct: 646 SGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQLGHGNTTS---ESVPKIIRSLENKIV 702
Query: 286 KDVACGGVHSCALTSKG---ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
+ V+C H+ G LY +G + GQLG +D+ R IP V
Sbjct: 703 RLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLG-------------HNDSIDRKIPQFV 749
Query: 343 ---VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+ VACG HT+V G+ +G N YGQ
Sbjct: 750 EALSDQQIVSVACGQYHTMVVTASGKAFAFGKNDYGQ 786
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 68/165 (41%), Gaps = 12/165 (7%)
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
EV++ G S G+LGH S R+ AL I + G H+ LT+ G ++
Sbjct: 563 EVWSCGQNSYGELGHGDTASRKSF---ERIQALQQKEIIQIGAGNEHTVVLTADGKVFTC 619
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G + GQ G G R ++ IP + + G HT++ DGR+
Sbjct: 620 GYNDNGQCGQGGTARV---------SHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVA 670
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
GYN GQ + +T P + ++ +L + + VLA
Sbjct: 671 TCGYNYRGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLA 715
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 14/123 (11%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLD---------IACGHEH 73
++ +G N GQ G QL + F +N+R +D IACG H
Sbjct: 829 LFAFGRNDYGQLGLGRSNASSTSNLQLQQQRF-----SNARLIDELEGKDIVRIACGCYH 883
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
T AV+ +G ++ +G N GQLG G R +P + + V ++ G + T + +
Sbjct: 884 TIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDFVGKRVALVAAGFYHTVVLTGGK 943
Query: 134 END 136
E+D
Sbjct: 944 EDD 946
>gi|301115610|ref|XP_002905534.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262110323|gb|EEY68375.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 456
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 171/375 (45%), Gaps = 62/375 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQ-LRIP-KQLPPELFGCPAGANSRWLDIACGHEHTAAV 77
+S++Y WG GQ G + +R ++L P+L G ++ G H+AA+
Sbjct: 68 QSSVYTWGNGTLGQLGHGSVIKSGIRSAYEELTPKLTEALEGKAITHVEF--GASHSAAI 125
Query: 78 ASDGTLFTWGANEFGQLGDG-TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+G L+ WG+NE+ +LG G + E P +V+ L+ + +SCG + TAA+ E D
Sbjct: 126 DEEGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGIKIVDVSCGDYFTAAVDE----D 181
Query: 137 GTISTSRLWVWG-------------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALS 183
G + + W WG + PRL I V CG H VAL+
Sbjct: 182 GKMYS---WGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPIATVECGEFHTVALT 238
Query: 184 ECGLLQAWGYNEYGQLGRG--ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
+ G + AWG EYG+LG G TCE P I+ ++K + + ++ G S
Sbjct: 239 KDGEIWAWGNGEYGRLGNGESDTCE---VPEPIEFFSK--------DNVVSIAAGRDFSF 287
Query: 242 AVSENGEVYTWGLGSVGQL---GHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
A+++ GE+Y+WG S QL G ++ + E +P V A +G+ +K +A G H+ A+
Sbjct: 288 ALTDKGELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLLVKQIAAGYDHAAAV 347
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 358
T G LY WG + P+E V + + VACG +T+
Sbjct: 348 TEDGRLYMWGA-------------KIWIEPHEMTA--------VNEHKMTQVACGRQYTV 386
Query: 359 VYMRDGRIHGWGYNS 373
DG++ +G S
Sbjct: 387 GLTDDGKVFTFGKGS 401
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 148/325 (45%), Gaps = 57/325 (17%)
Query: 74 TAAVASDGTLFTWGANEFGQLGDGT--EEGRKH------PEKVKQLQSEFVKSISCGAHC 125
TA+ A+ +++TWG GQLG G+ + G + P+ + L+ + + + GA
Sbjct: 62 TASYATQSSVYTWGNGTLGQLGHGSVIKSGIRSAYEELTPKLTEALEGKAITHVEFGASH 121
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT-----PNTI-------ICQVS 173
+AAI E +L+VWG N+ + +L G + P + I VS
Sbjct: 122 SAAIDEE---------GKLYVWGSNE---YSKLGLGESSEMETLPREVEALKGIKIVDVS 169
Query: 174 CGSVHVVALSECGLLQAWGYN----EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK 229
CG A+ E G + +WG+ + + PR++ +D+
Sbjct: 170 CGDYFTAAVDEDGKMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLL---TTLVDQGV---P 223
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
I V CGE+H+ A++++GE++ WG G G+LG+ D +P + + +A
Sbjct: 224 IATVECGEFHTVALTKDGEIWAWGNGEYGRLGNGE---SDTCEVPEPIEFFSKDNVVSIA 280
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTY-FRNIPILV-VPNG- 346
G S ALT KG LY+WGG+ QLG+G D Y +IP+LV NG
Sbjct: 281 AGRDFSFALTDKGELYSWGGNSQNQLGIGGGLA--------MDVYNIESIPVLVEAFNGL 332
Query: 347 -VQLVACGHSHTLVYMRDGRIHGWG 370
V+ +A G+ H DGR++ WG
Sbjct: 333 LVKQIAAGYDHAAAVTEDGRLYMWG 357
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 105/233 (45%), Gaps = 17/233 (7%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKF---LDEAPELEKITQVSCGEYHSAAVSENG 247
WG GQLG G + G R Y + L EA E + IT V G HSAA+ E G
Sbjct: 74 WGNGTLGQLGHGSVIK--SGIR--SAYEELTPKLTEALEGKAITHVEFGASHSAAIDEEG 129
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
++Y WG +LG +S + E LPR V AL GI I DV+CG + A+ G +Y+W
Sbjct: 130 KLYVWGSNEYSKLGLG--ESSEMETLPREVEALKGIKIVDVSCGDYFTAAVDEDGKMYSW 187
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGR 365
G G + D + +V GV + V CG HT+ +DG
Sbjct: 188 GWG-----GSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPIATVECGEFHTVALTKDGE 242
Query: 366 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADACSL 417
I WG YG+ N +S P P+++ + V +AAG S L D L
Sbjct: 243 IWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGRDFSFALTDKGEL 295
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 127/300 (42%), Gaps = 63/300 (21%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLP-PELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG+ G T + K P P L + CG HT A+ DG
Sbjct: 184 MYSWGWG--GSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPIATVECGEFHTVALTKDG 241
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
++ WG E+G+LG+G + + PE ++ + V SI+ G + A+ + E
Sbjct: 242 EIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGRDFSFALTDKGE------- 294
Query: 142 SRLWVWG---QNQGSNFPRLFWGAFTPNTI-----------ICQVSCGSVHVVALSECGL 187
L+ WG QNQ L + +I + Q++ G H A++E G
Sbjct: 295 --LYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLLVKQIAAGYDHAAAVTEDGR 352
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL-----EKITQVSCGEYHSAA 242
L WG AK E E+ K+TQV+CG ++
Sbjct: 353 LYMWG-------------------------AKIWIEPHEMTAVNEHKMTQVACGRQYTVG 387
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHSCALTS 300
++++G+V+T+G GS LGH GD+ +L P ++ AL G+ I V+CG H A+ +
Sbjct: 388 LTDDGKVFTFGKGSSNCLGH-----GDRKNQLQPVKIQALAGVNITSVSCGDYHMGAIAT 442
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
Query: 27 GYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTW 86
GY+H+ GR + P A + +ACG ++T + DG +FT+
Sbjct: 340 GYDHAAAVTEDGRLYMWGAKIWIEPHEM--TAVNEHKMTQVACGRQYTVGLTDDGKVFTF 397
Query: 87 GANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
G LG G + + P K++ L + S+SCG + AIA P
Sbjct: 398 GKGSSNCLGHGDRKNQLQPVKIQALAGVNITSVSCGDYHMGAIATP 443
>gi|315645418|ref|ZP_07898542.1| hypothetical protein PVOR_07930 [Paenibacillus vortex V453]
gi|315278896|gb|EFU42206.1| hypothetical protein PVOR_07930 [Paenibacillus vortex V453]
Length = 667
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 111/365 (30%), Positives = 163/365 (44%), Gaps = 64/365 (17%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG GQ G + P + G + +DI G T A+ SDGT
Sbjct: 55 VYVWGQGDRGQIGDAAWN-----ARNTPVQARGL-----NDVMDIHTGVRSTMALRSDGT 104
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGTIST 141
++TWG+NE GQLG GT + P V L +K+IS G + + A+ E +GT+
Sbjct: 105 VWTWGSNENGQLGIGTTADKNVPTPVSGLSG--IKAISGGLGYHSMALTE----NGTV-- 156
Query: 142 SRLWVWGQNQG----------SNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
W WG+N N P L G + + ++ G + +AL G + AW
Sbjct: 157 ---WTWGKNDNGELGNGTTVQQNSPVLVIGL----SDVTAIAAGGYYSLALKSDGTIWAW 209
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G N G+LG G + P + G L + ++ G HS A+ ++G V+
Sbjct: 210 GANGNGELGDGTIVDK-HTPVQVSG----------LSDVIAITAGGSHSLAIKQDGTVWA 258
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG+ G LG + + +P +V L IK +A GG HS AL +G ++ WG +
Sbjct: 259 WGINMYGTLGDGTRTN---RTIPVKVRNLQ--HIKAIAGGGHHSLALDQEGNVWGWGDNS 313
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGY 371
GQLGLG + + P + L V +A G H+ +DGR+ GWG
Sbjct: 314 RGQLGLGHNSSRTT--PEQ----------LTGIEHVLDIAGGGFHSAALKKDGRVWGWGL 361
Query: 372 NSYGQ 376
NS GQ
Sbjct: 362 NSSGQ 366
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 159/356 (44%), Gaps = 55/356 (15%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ G+ HTA++ S G ++ WG + GQ+GD R P + + L V I G T
Sbjct: 39 LVAGYYHTASLVSSGDVYVWGQGDRGQIGDAAWNARNTPVQARGLND--VMDIHTGVRST 96
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGS---------- 176
A+ +DGT+ W WG N+ +L G + VS S
Sbjct: 97 MAL----RSDGTV-----WTWGSNENG---QLGIGTTADKNVPTPVSGLSGIKAISGGLG 144
Query: 177 VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG 236
H +AL+E G + WG N+ G+LG G T + P ++ G L +T ++ G
Sbjct: 145 YHSMALTENGTVWTWGKNDNGELGNGTTVQ-QNSPVLVIG----------LSDVTAIAAG 193
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSC 296
Y+S A+ +G ++ WG G+LG ++ DK P +V L + + GG HS
Sbjct: 194 GYYSLALKSDGTIWAWGANGNGELGDGTIV--DKH-TPVQVSGLSDVIA--ITAGGSHSL 248
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHS 355
A+ G ++AWG + G LG G +T R IP+ V ++ +A G
Sbjct: 249 AIKQDGTVWAWGINMYGTLGDGTRTN-------------RTIPVKVRNLQHIKAIAGGGH 295
Query: 356 HTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
H+L ++G + GWG NS GQ ++ P + + V +A GG HSA L
Sbjct: 296 HSLALDQEGNVWGWGDNSRGQLGLGHNSSRTTPEQLT-GIEHVLDIAGGGFHSAAL 350
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 151/326 (46%), Gaps = 46/326 (14%)
Query: 1 MDINEIIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA 60
MDI+ + R + + ++ WG N +GQ G G +P + L G A
Sbjct: 87 MDIHTGV----RSTMALRSDGTVWTWGSNENGQLG-IGTTADKNVPTPVSG-LSGIKA-- 138
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
+ G+ H+ A+ +GT++TWG N+ G+LG+GT + P V L V +I+
Sbjct: 139 ----ISGGLGY-HSMALTENGTVWTWGKNDNGELGNGTTVQQNSPVLVIGLSD--VTAIA 191
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQN-QGSNFPRLFWGAFTPNTI-----ICQVSC 174
G + + A+ ++DGTI W WG N G TP + + ++
Sbjct: 192 AGGYYSLAL----KSDGTI-----WAWGANGNGELGDGTIVDKHTPVQVSGLSDVIAITA 242
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G H +A+ + G + AWG N YG LG +G + R I + L+ I ++
Sbjct: 243 GGSHSLAIKQDGTVWAWGINMYGTLG-----DGTRTNRTIPVKVR------NLQHIKAIA 291
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVH 294
G +HS A+ + G V+ WG S GQLG L P ++ ++ + D+A GG H
Sbjct: 292 GGGHHSLALDQEGNVWGWGDNSRGQLG---LGHNSSRTTPEQLTGIEHVL--DIAGGGFH 346
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQ 320
S AL G ++ WG + +GQ+G G +
Sbjct: 347 SAALKKDGRVWGWGLNSSGQIGDGTR 372
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 41/89 (46%), Gaps = 10/89 (11%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G G P+QL LDIA G H+AA+ DG
Sbjct: 306 VWGWGDNSRGQLGL-GHNSSRTTPEQLT---------GIEHVLDIAGGGFHSAALKKDGR 355
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQL 111
++ WG N GQ+GDGT R P K +
Sbjct: 356 VWGWGLNSSGQIGDGTRNDRNAPALTKAV 384
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 52/128 (40%), Gaps = 16/128 (12%)
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NG 346
+ G H+ +L S G +Y WG GQ+G ++ RN P+ N
Sbjct: 39 LVAGYYHTASLVSSGDVYVWGQGDRGQIG-------------DAAWNARNTPVQARGLND 85
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAG-G 405
V + G T+ DG + WG N GQ + P+PV G ++ ++ G G
Sbjct: 86 VMDIHTGVRSTMALRSDGTVWTWGSNENGQLGIGTTADKNVPTPVSGLSG-IKAISGGLG 144
Query: 406 GHSAVLAD 413
HS L +
Sbjct: 145 YHSMALTE 152
>gi|242016591|ref|XP_002428862.1| X-linked retinitis pigmentosa GTPase regulator, putative [Pediculus
humanus corporis]
gi|212513605|gb|EEB16124.1| X-linked retinitis pigmentosa GTPase regulator, putative [Pediculus
humanus corporis]
Length = 516
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 128/422 (30%), Positives = 181/422 (42%), Gaps = 80/422 (18%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
IP A++ +G + R + L F N +I+CG EHTA
Sbjct: 9 IPDTGAVFTFG--------------KSRFAEDLSSHFFV----RNDPVKEISCGDEHTAL 50
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-------AHCTAAI 129
V G +F +G N+FGQLG G + P +K L+ ++CG C
Sbjct: 51 VCKSGRVFLFGKNDFGQLGFGHTKIVNKPSCLKSLKPFQSIHVACGKSHTLISTECNKIF 110
Query: 130 AEPRENDGTISTSRL---WVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
A +DG + L WV P++ I +S G H L+E G
Sbjct: 111 AFGCNSDGQLGVGDLDDRWV---------PQMISTDLEKTNNIIALSAGCHHSAFLTEEG 161
Query: 187 LLQAWGYNEYGQLGRGITCEG-LQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
+ WG N GQ GI E L PR I+ + P I +SCG YH+A +S
Sbjct: 162 SVYIWGDNSDGQC--GIKNENYLLNPRKIEF------QNP----INSISCGYYHTAFISL 209
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV---VALDGIFIKDVACGGVHSCALTSKG 302
G+VYT+G G+LG DK LP V V LD I V CGG H+ LT G
Sbjct: 210 -GKVYTFGEDDNGKLGR-----SDK--LPNDVPEGVELDENCIS-VKCGGSHTIILTESG 260
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
YA+G + +GQLGLG FS IP + N+ ++ V CG SH+
Sbjct: 261 KAYAFGSNFSGQLGLGNFETEFS-IPQRVNFTDENVNLI-------YVTCGESHSAFLTD 312
Query: 363 DGRIHGWGYNSYGQAANE-KSTYAWYPSPVD-----WCVGEVRKLAAGGGHSAVLADACS 416
+G+++ G G+ NE +ST P+ ++ +C ++ GG H+ VLA A
Sbjct: 313 EGKLYTCGDGRNGKLCNEDESTNICTPTTIEMFKSFFCT----YVSCGGCHTMVLAKALK 368
Query: 417 LK 418
L+
Sbjct: 369 LE 370
>gi|444911573|ref|ZP_21231747.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444717927|gb|ELW58746.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 708
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 129/426 (30%), Positives = 192/426 (45%), Gaps = 60/426 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G +G P ++ G + ++ G H+ AV++DGT
Sbjct: 181 LWAWGDNLYGQLGNRGE-----FNSSEPVQVLRVTGG-----VTVSAGANHSLAVSADGT 230
Query: 83 LFTWGANEFGQLGDG-TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
++ WG N GQLG T P +V +++ +++ G + + A+ +DGT+
Sbjct: 231 VWAWGDNSHGQLGIARTTPLLSIPGRVPEVRGSV--AMAAGDNHSLAV----RDDGTV-- 282
Query: 142 SRLWVWGQNQGSNFPRLFW------GAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNE 195
W WG N F G + V+ GS H +A+ + G + AWG N
Sbjct: 283 ---WAWGSNGHGQLGNGFMVDNSEPGRVPGLEGVGAVAAGSNHSLAVRDDGTVWAWGSNV 339
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
GQ G G T + L P + G + + A + +HS AVS +G + WG
Sbjct: 340 EGQRGDGTTGQ-LSAPTRVPGVSGVVGVAANV----------FHSLAVSADGSAWAWGHN 388
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
S G+LG S + P RV L + VA G HS AL + G + AWG + GQL
Sbjct: 389 SHGELGDGSTR---NSPAPVRVDGLKEVVA--VAAGSSHSLALLADGTVLAWGDNTFGQL 443
Query: 316 GLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
G G TR+ +P + R + GV VA G SH+L + DG + WGYN G
Sbjct: 444 GDG--TRASHSVPAQ----VRGL------RGVVAVAAGSSHSLALLADGTVWTWGYNLNG 491
Query: 376 QAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLAD--ACSLKELCEFRLAESVTLS 432
Q + +TY + P V G V +AAGG HS AV +D A + E + +L + S
Sbjct: 492 QLGDGTTTYRYEPVAVKGLEGVV-AVAAGGNHSLAVRSDGTAWAWGENVKGQLGDGTLTS 550
Query: 433 NASEIE 438
+ +E
Sbjct: 551 RPAPVE 556
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 131/444 (29%), Positives = 192/444 (43%), Gaps = 82/444 (18%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + ++ WG N SGQ G + + P + G S + +A G H+ A
Sbjct: 75 VHSDGTVWAWGNNSSGQLGDGSFDNRAE-----PVRVRGL-----SGVVAVAAGGYHSLA 124
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V++DGT++ WG N GQLGDG+ + R P +V+ + AH A +D
Sbjct: 125 VSADGTVWAWGNNSSGQLGDGSFDNRAEPVRVRGSSGVVAVAAGG-AHSLAV-----RSD 178
Query: 137 GTISTSRLWVWGQN-QGSNFPRLFWGAFTPNTII-----CQVSCGSVHVVALSECGLLQA 190
G LW WG N G R + + P ++ VS G+ H +A+S G + A
Sbjct: 179 GI-----LWAWGDNLYGQLGNRGEFNSSEPVQVLRVTGGVTVSAGANHSLAVSADGTVWA 233
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG N +GQLG T L P + PE+ ++ G+ HS AV ++G V+
Sbjct: 234 WGDNSHGQLGIARTTPLLSIPGRV----------PEVRGSVAMAAGDNHSLAVRDDGTVW 283
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
WG GQLG+ + + P RV L+G + VA G HS A+ G ++AWG +
Sbjct: 284 AWGSNGHGQLGNGFMVDNSE---PGRVPGLEG--VGAVAAGSNHSLAVRDDGTVWAWGSN 338
Query: 311 QAGQLG------LGPQTR----------------SFSLIPNES-------------DTYF 335
GQ G L TR S ++ + S D
Sbjct: 339 VEGQRGDGTTGQLSAPTRVPGVSGVVGVAANVFHSLAVSADGSAWAWGHNSHGELGDGST 398
Query: 336 RNIPILVVPNGVQ---LVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVD 392
RN P V +G++ VA G SH+L + DG + WG N++GQ + P+ V
Sbjct: 399 RNSPAPVRVDGLKEVVAVAAGSSHSLALLADGTVLAWGDNTFGQLGDGTRASHSVPAQVR 458
Query: 393 WCVGEVRKLAAGGGHS-AVLADAC 415
G V +AAG HS A+LAD
Sbjct: 459 GLRGVV-AVAAGSSHSLALLADGT 481
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 112/342 (32%), Positives = 158/342 (46%), Gaps = 61/342 (17%)
Query: 47 KQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPE 106
+++P + G S + +A G H+ AV SDGT++ WG N GQLGDG+ + R P
Sbjct: 50 RRVPVRVLGL-----SGVVTVAAGGGHSLAVHSDGTVWAWGNNSSGQLGDGSFDNRAEPV 104
Query: 107 KVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPN 166
+V+ L V +++ G + + A++ DGT+ W WG N G+F
Sbjct: 105 RVRGLSG--VVAVAAGGYHSLAVSA----DGTV-----WAWGNNSSGQLGD---GSFDNR 150
Query: 167 TIICQV---------SCGSVHVVALSECGLLQAWGYNEYGQLG-RG--ITCEGLQGPRVI 214
+V + G H +A+ G+L AWG N YGQLG RG + E +Q RV
Sbjct: 151 AEPVRVRGSSGVVAVAAGGAHSLAVRSDGILWAWGDNLYGQLGNRGEFNSSEPVQVLRVT 210
Query: 215 KGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLP 274
G VS G HS AVS +G V+ WG S GQLG ++ +P
Sbjct: 211 GG--------------VTVSAGANHSLAVSADGTVWAWGDNSHGQLGIA--RTTPLLSIP 254
Query: 275 RRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTY 334
RV + G +A G HS A+ G ++AWG + GQLG G F + +E
Sbjct: 255 GRVPEVRGSVA--MAAGDNHSLAVRDDGTVWAWGSNGHGQLGNG-----FMVDNSEPG-- 305
Query: 335 FRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+P L GV VA G +H+L DG + WG N GQ
Sbjct: 306 --RVPGL---EGVGAVAAGSNHSLAVRDDGTVWAWGSNVEGQ 342
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 124/448 (27%), Positives = 175/448 (39%), Gaps = 120/448 (26%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++ WG N GQ G L IP ++P E+ G A +A G H+ A
Sbjct: 225 VSADGTVWAWGDNSHGQLGIARTTPLLSIPGRVP-EVRGSVA--------MAAGDNHSLA 275
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAI------- 129
V DGT++ WG+N GQLG+G P +V L E V +++ G++ + A+
Sbjct: 276 VRDDGTVWAWGSNGHGQLGNGFMVDNSEPGRVPGL--EGVGAVAAGSNHSLAVRDDGTVW 333
Query: 130 -----AEPRENDGTI-----------------------------STSRLWVWGQNQ---- 151
E + DGT + W WG N
Sbjct: 334 AWGSNVEGQRGDGTTGQLSAPTRVPGVSGVVGVAANVFHSLAVSADGSAWAWGHNSHGEL 393
Query: 152 GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGIT 204
G R +P + + V+ GS H +AL G + AWG N +GQLG G T
Sbjct: 394 GDGSTR-----NSPAPVRVDGLKEVVAVAAGSSHSLALLADGTVLAWGDNTFGQLGDG-T 447
Query: 205 CEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCS 264
P ++G L + V+ G HS A+ +G V+TWG GQLG +
Sbjct: 448 RASHSVPAQVRG----------LRGVVAVAAGSSHSLALLADGTVWTWGYNLNGQLGDGT 497
Query: 265 LQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQT--- 321
P V L+G+ VA GG HS A+ S G +AWG + GQLG G T
Sbjct: 498 TT---YRYEPVAVKGLEGVVA--VAAGGNHSLAVRSDGTAWAWGENVKGQLGDGTLTSRP 552
Query: 322 ---------------RSFSL------IP-----------NESDTYFRNIPILVVPNG-VQ 348
+ SL P + T R +P+ V G V
Sbjct: 553 APVEVKAAAKAVAAAQGLSLAVGSDGFPWAWGNNSSGQLGDGSTTSRPMPMRVQGAGEVV 612
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
VA G+ H+L +G + WG N+ GQ
Sbjct: 613 AVAAGNGHSLALSPEGGVWAWGQNARGQ 640
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 154/362 (42%), Gaps = 63/362 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
IA G H+ +V DGT++ G N GQLGDGT R+ P +V L S V + G H
Sbjct: 15 IATGGSHSLSVHQDGTVWAVGGNSVGQLGDGTTSLRRVPVRVLGL-SGVVTVAAGGGHSL 73
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-----ICQVSCGSV 177
A +DGT+ W WG N G+F P + + V+ G
Sbjct: 74 AV-----HSDGTV-----WAWGNNSSGQLGD---GSFDNRAEPVRVRGLSGVVAVAAGGY 120
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H +A+S G + AWG N GQLG G + RV + V+ G
Sbjct: 121 HSLAVSADGTVWAWGNNSSGQLGDGSFDNRAEPVRV-----------RGSSGVVAVAAGG 169
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
HS AV +G ++ WG GQLG+ + + P +V+ + G V+ G HS A
Sbjct: 170 AHSLAVRSDGILWAWGDNLYGQLGNRGEFNSSE---PVQVLRVTGGVT--VSAGANHSLA 224
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN------GVQLVA 351
+++ G ++AWG + GQLG+ R P+L +P G +A
Sbjct: 225 VSADGTVWAWGDNSHGQLGI-----------------ARTTPLLSIPGRVPEVRGSVAMA 267
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
G +H+L DG + WG N +GQ N P V G V +AAG HS +
Sbjct: 268 AGDNHSLAVRDDGTVWAWGSNGHGQLGNGFMVDNSEPGRVPGLEG-VGAVAAGSNHSLAV 326
Query: 412 AD 413
D
Sbjct: 327 RD 328
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 160/391 (40%), Gaps = 89/391 (22%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLP--PELFGCPAGANSRWLDIACGHEHT 74
+ A + + WG+N G+ G G R P ++ E+ + +A G H+
Sbjct: 376 VSADGSAWAWGHNSHGELG-DGSTRNSPAPVRVDGLKEV-----------VAVAAGSSHS 423
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPR 133
A+ +DGT+ WG N FGQLGDGT P +V+ L+ V +++ G +H A +A
Sbjct: 424 LALLADGTVLAWGDNTFGQLGDGTRASHSVPAQVRGLRG--VVAVAAGSSHSLALLA--- 478
Query: 134 ENDGTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVAL 182
DGT+ W WG N G+ R + P + + V+ G H +A+
Sbjct: 479 --DGTV-----WTWGYNLNGQLGDGTTTYR-----YEPVAVKGLEGVVAVAAGGNHSLAV 526
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAP--ELEKITQVSCGEYHS 240
G AWG N GQLG G AP V+ + S
Sbjct: 527 RSDGTAWAWGENVKGQLGDGTLTS---------------RPAPVEVKAAAKAVAAAQGLS 571
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
AV +G + WG S GQLG S S +P RV + VA G HS AL+
Sbjct: 572 LAVGSDGFPWAWGNNSSGQLGDGSTTS---RPMPMRVQGAGEVVA--VAAGNGHSLALSP 626
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVA------CGH 354
+G ++AWG + GQLG G R + P VQ ++ G
Sbjct: 627 EGGVWAWGQNARGQLGEGTLDRRLA------------------PTRVQGLSGVVAVAAGG 668
Query: 355 SHTLVYMRDGRIHGWGYNSYGQAANEKSTYA 385
+ +L DG + WG N++GQ N YA
Sbjct: 669 AFSLAVRDDGSVWSWGDNAFGQLGNAPPVYA 699
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 86/248 (34%), Positives = 115/248 (46%), Gaps = 32/248 (12%)
Query: 170 CQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK 229
+++ G H +++ + G + A G N GQLG G T RV+ L
Sbjct: 13 ARIATGGSHSLSVHQDGTVWAVGGNSVGQLGDGTTSLRRVPVRVLG-----------LSG 61
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ V+ G HS AV +G V+ WG S GQLG S D P RV L G+ VA
Sbjct: 62 VVTVAAGGGHSLAVHSDGTVWAWGNNSSGQLGDGSF---DNRAEPVRVRGLSGVVA--VA 116
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQ 348
GG HS A+++ G ++AWG + +GQLG G SF R P+ V +GV
Sbjct: 117 AGGYHSLAVSADGTVWAWGNNSSGQLGDG----SFD---------NRAEPVRVRGSSGVV 163
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
VA G +H+L DG + WG N YGQ N + P V G V ++AG HS
Sbjct: 164 AVAAGGAHSLAVRSDGILWAWGDNLYGQLGNRGEFNSSEPVQVLRVTGGV-TVSAGANHS 222
Query: 409 -AVLADAC 415
AV AD
Sbjct: 223 LAVSADGT 230
>gi|428166922|gb|EKX35889.1| hypothetical protein GUITHDRAFT_40307, partial [Guillardia theta
CCMP2712]
Length = 277
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 146/304 (48%), Gaps = 40/304 (13%)
Query: 84 FTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSR 143
F+WG N G LG GT + P + LQ V S++CG +E + + +
Sbjct: 1 FSWGFNNDGALGLGTTDAVGSPCPIIALQGLLVVSVACGGG-----SEEQHSAAVTEQGQ 55
Query: 144 LWVWGQ----------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++ WG +Q PRL G N I+ +V+CGS H V +S+ GL+ AWG+
Sbjct: 56 VYTWGSGKSGQLGHGDSQNLVLPRLIVG-LQSNPIV-EVACGSAHTVVVSKAGLVFAWGW 113
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
+GQLG G T +V LD K+ +V+CG H+A V+E+G VYTWG
Sbjct: 114 GHFGQLGVGSTHNSNDPVQVTS-----LDGV----KVCKVACGSAHTAVVTESGHVYTWG 164
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS-KGALYAWGGSQA 312
G GQLGH S + P V L GI++ +ACG H+ ++ A+++WG +
Sbjct: 165 WGVNGQLGHGDDASQSR---PMYVKKLHGIYVSTLACGLAHTVVVSEVDRAVFSWGWDEY 221
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYN 372
GQLG G + + + R I L Q +ACG S+TL G ++ +G+
Sbjct: 222 GQLGHG----GWDIFGGNKNRSPRPIKDL------QQIACGSSYTLALSSRGDVYAFGWG 271
Query: 373 SYGQ 376
GQ
Sbjct: 272 KDGQ 275
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 140/310 (45%), Gaps = 50/310 (16%)
Query: 24 YVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL--DIACG----HEHTAAV 77
+ WG+N+ G G G + P CP A L +ACG +H+AAV
Sbjct: 1 FSWGFNNDGALGL-GTTDAVGSP---------CPIIALQGLLVVSVACGGGSEEQHSAAV 50
Query: 78 ASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG 137
G ++TWG+ + GQLG G + P + LQS + ++CG+ T +++
Sbjct: 51 TEQGQVYTWGSGKSGQLGHGDSQNLVLPRLIVGLQSNPIVEVACGSAHTVVVSKA----- 105
Query: 138 TISTSRLWVWGQ--------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQ 189
W WG SN P +C+V+CGS H ++E G +
Sbjct: 106 --GLVFAWGWGHFGQLGVGSTHNSNDPVQV--TSLDGVKVCKVACGSAHTAVVTESGHVY 161
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE-NGE 248
WG+ GQLG G + V K + + ++ ++CG H+ VSE +
Sbjct: 162 TWGWGVNGQLGHGDDASQSRPMYVKKLHGIY---------VSTLACGLAHTVVVSEVDRA 212
Query: 249 VYTWGLGSVGQLGH--CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
V++WG GQLGH + G+K PR + L + +ACG ++ AL+S+G +YA
Sbjct: 213 VFSWGWDEYGQLGHGGWDIFGGNKNRSPRPIKDL-----QQIACGSSYTLALSSRGDVYA 267
Query: 307 WGGSQAGQLG 316
+G + GQLG
Sbjct: 268 FGWGKDGQLG 277
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 119/253 (47%), Gaps = 33/253 (13%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y WG SGQ G G + L +P+ L L P +++ACG HT
Sbjct: 50 VTEQGQVYTWGSGKSGQLGH-GDSQNLVLPR-LIVGLQSNPI------VEVACGSAHTVV 101
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V+ G +F WG FGQLG G+ P +V L V ++CG+ TA + E
Sbjct: 102 VSKAGLVFAWGWGHFGQLGVGSTHNSNDPVQVTSLDGVKVCKVACGSAHTAVVTE----S 157
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG-LLQ 189
G + T W WG N ++ R + + ++CG H V +SE +
Sbjct: 158 GHVYT---WGWGVNGQLGHGDDASQSRPMYVKKLHGIYVSTLACGLAHTVVVSEVDRAVF 214
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPE-LEKITQVSCGEYHSAAVSENGE 248
+WG++EYGQLG G G + G + +P ++ + Q++CG ++ A+S G+
Sbjct: 215 SWGWDEYGQLGHG-------GWDIFGGNK---NRSPRPIKDLQQIACGSSYTLALSSRGD 264
Query: 249 VYTWGLGSVGQLG 261
VY +G G GQLG
Sbjct: 265 VYAFGWGKDGQLG 277
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 95/213 (44%), Gaps = 34/213 (15%)
Query: 6 IIGETARPVDNIPAKSA----------IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFG 55
I+G + P+ + SA ++ WG+ H GQ G G P Q+ L G
Sbjct: 81 IVGLQSNPIVEVACGSAHTVVVSKAGLVFAWGWGHFGQLGV-GSTHNSNDPVQVT-SLDG 138
Query: 56 CPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
+ACG HTA V G ++TWG GQLG G + + P VK+L +
Sbjct: 139 VKV------CKVACGSAHTAVVTESGHVYTWGWGVNGQLGHGDDASQSRPMYVKKLHGIY 192
Query: 116 VKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAF------TPNTI- 168
V +++CG T ++E ++ WG ++ W F +P I
Sbjct: 193 VSTLACGLAHTVVVSEVDR--------AVFSWGWDEYGQLGHGGWDIFGGNKNRSPRPIK 244
Query: 169 -ICQVSCGSVHVVALSECGLLQAWGYNEYGQLG 200
+ Q++CGS + +ALS G + A+G+ + GQLG
Sbjct: 245 DLQQIACGSSYTLALSSRGDVYAFGWGKDGQLG 277
>gi|333978308|ref|YP_004516253.1| Ig domain-containing protein [Desulfotomaculum kuznetsovii DSM
6115]
gi|333821789|gb|AEG14452.1| Ig domain protein group 2 domain protein [Desulfotomaculum
kuznetsovii DSM 6115]
Length = 1401
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 101/319 (31%), Positives = 147/319 (46%), Gaps = 51/319 (15%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ G ++ A+ SDGT++ WG N +GQLGDGT R P +V+ L V +I+ G +
Sbjct: 72 VEAGSFYSLALKSDGTVWAWGDNYYGQLGDGTTTNRYTPVQVQNLTG--VVAIAAGGGHS 129
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQV---------SCGSV 177
A+ ++DGT+ W WG N + +L G T T QV + G
Sbjct: 130 LAL----KSDGTV-----WAWGYN---GYGQLGDGTITNRTTPVQVKNLTGVVAVAAGGG 177
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H +AL G + AWGYN YGQLG G T + Y + L + ++ G
Sbjct: 178 HSLALKSDGTVWAWGYNGYGQLGDGTT---------MNRYTPV--QVQNLTGVVAIAAGS 226
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
HS A+ +G V+ WG GQLG + P RV L + +A G HS A
Sbjct: 227 SHSLALKSDGTVWAWGNNGYGQLGDGTTT---NRTTPVRVQGLTDVVA--IAAGNEHSLA 281
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT 357
L S G ++ WG + +GQLG G T ++ + +N+ GV +A G H+
Sbjct: 282 LKSDGTVWTWGWNYSGQLGDGTTTNRYTPV------QVQNL------TGVVAIAAGGGHS 329
Query: 358 LVYMRDGRIHGWGYNSYGQ 376
L DG + WG N +G+
Sbjct: 330 LALKSDGTVWAWGNNDWGE 348
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 145/310 (46%), Gaps = 53/310 (17%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N+ GQ G G P Q+ L G A IA G H+ A+ SDGT
Sbjct: 88 VWAWGDNYYGQLG-DGTTTNRYTPVQVQ-NLTGVVA--------IAAGGGHSLALKSDGT 137
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG N +GQLGDGT R P +VK L + V + G H A ++DGT+
Sbjct: 138 VWAWGYNGYGQLGDGTITNRTTPVQVKNL-TGVVAVAAGGGHSLA-----LKSDGTV--- 188
Query: 143 RLWVWGQN------QGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECGLLQAW 191
W WG N G+ R +TP + + ++ GS H +AL G + AW
Sbjct: 189 --WAWGYNGYGQLGDGTTMNR-----YTPVQVQNLTGVVAIAAGSSHSLALKSDGTVWAW 241
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G N YGQLG G T P ++G L + ++ G HS A+ +G V+T
Sbjct: 242 GNNGYGQLGDGTTTNRTT-PVRVQG----------LTDVVAIAAGNEHSLALKSDGTVWT 290
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG GQLG + P +V L G+ +A GG HS AL S G ++AWG +
Sbjct: 291 WGWNYSGQLGDGTTT---NRYTPVQVQNLTGVVA--IAAGGGHSLALKSDGTVWAWGNND 345
Query: 312 AGQLGLGPQT 321
G+LG G +T
Sbjct: 346 WGELGDGTRT 355
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 134/337 (39%), Gaps = 77/337 (22%)
Query: 119 ISCGAHCTAAIAEPR----ENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSC 174
IS G+ A R ++DGT+ W WG G+ P T + V
Sbjct: 29 ISTGSQVKIAAGGARSLAIKSDGTV-----WAWG---GTPVPVQNL------TGVVAVEA 74
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGIT--------CEGLQGPRVI------------ 214
GS + +AL G + AWG N YGQLG G T + L G I
Sbjct: 75 GSFYSLALKSDGTVWAWGDNYYGQLGDGTTTNRYTPVQVQNLTGVVAIAAGGGHSLALKS 134
Query: 215 ---------KGYAKFLD----------EAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
GY + D + L + V+ G HS A+ +G V+ WG
Sbjct: 135 DGTVWAWGYNGYGQLGDGTITNRTTPVQVKNLTGVVAVAAGGGHSLALKSDGTVWAWGYN 194
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
GQLG + P +V L G+ +A G HS AL S G ++AWG + GQL
Sbjct: 195 GYGQLGDGTTM---NRYTPVQVQNLTGVVA--IAAGSSHSLALKSDGTVWAWGNNGYGQL 249
Query: 316 GLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
G G T R P+ V V +A G+ H+L DG + WG+N
Sbjct: 250 GDGTTTN-------------RTTPVRVQGLTDVVAIAAGNEHSLALKSDGTVWTWGWNYS 296
Query: 375 GQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
GQ + +T + P V G V +AAGGGHS L
Sbjct: 297 GQLGDGTTTNRYTPVQVQNLTG-VVAIAAGGGHSLAL 332
>gi|126330876|ref|XP_001375975.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Monodelphis
domestica]
Length = 1016
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 120/408 (29%), Positives = 173/408 (42%), Gaps = 92/408 (22%)
Query: 24 YVWGYNHSGQTG----RKGRERQLRIPKQLPPELFGCPAGA---NSRWLDIACGHEHTAA 76
Y WG N SGQ G + + R +R C GA N L ACG H+
Sbjct: 3 YCWGDNSSGQLGIPAVPRAKARAVR-----------CRRGASLGNQTLLQAACGERHSLL 51
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ SDGT+++ G N GQLG RK C H A + E
Sbjct: 52 LLSDGTVWSCGNNSCGQLG------RKR----------------CQKHGRPAQIQALETQ 89
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
+S VSCG H +A+ + G + +WG
Sbjct: 90 DIVS-------------------------------VSCGKEHSLAICKEGRVFSWGSGSD 118
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG ++ + + K +DE KI QVSCG YHS A++++G V++WG +
Sbjct: 119 GQLG-------IREFKKLSSIPKKIDELSSF-KIIQVSCGHYHSIALAQDGRVFSWGKNN 170
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
GQLG ++ + P+ V +LDGI + VA GG HS AL+ G Y WG + AGQL
Sbjct: 171 HGQLGLG--ENVPSQASPQWVKSLDGIPLAQVAAGGAHSFALSFSGTSYGWGRNNAGQLA 228
Query: 317 LGPQTRSFSLIPNE-SDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
L + S I S + + V ++CG HT V +DG++ +G N G
Sbjct: 229 LSGKKESAEQISKPFSIGELKRL-------QVTYISCGDEHTAVLTQDGKVFTFGSNDSG 281
Query: 376 QAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSLKELCEF 423
Q + + P VD V ++A G H+ LA +C+ ++ F
Sbjct: 282 QLGRQLISGMKGPQVVDSAVS-FSQIACGSYHT--LAYSCTTGQVISF 326
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 116/243 (47%), Gaps = 31/243 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG GQ G + ++ IPK++ EL ++ + + ++CGH H+ A+A DG
Sbjct: 110 VFSWGSGSDGQLGIREFKKLSSIPKKI-DEL------SSFKIIQVSCGHYHSIALAQDGR 162
Query: 83 LFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP-------RE 134
+F+WG N GQLG G + P+ VK L + ++ G + A++ R
Sbjct: 163 VFSWGKNNHGQLGLGENVPSQASPQWVKSLDGIPLAQVAAGGAHSFALSFSGTSYGWGRN 222
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
N G ++ S + + F + +SCG H L++ G + +G N
Sbjct: 223 NAGQLALSG----KKESAEQISKPFSIGELKRLQVTYISCGDEHTAVLTQDGKVFTFGSN 278
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS-ENGEVYTWG 253
+ GQLGR + G++GP+V+ F +Q++CG YH+ A S G+V ++G
Sbjct: 279 DSGQLGRQLI-SGMKGPQVVDSAVSF----------SQIACGSYHTLAYSCTTGQVISFG 327
Query: 254 LGS 256
GS
Sbjct: 328 CGS 330
>gi|330837408|ref|YP_004412049.1| chromosome condensation regulator RCC1 [Sphaerochaeta coccoides DSM
17374]
gi|329749311|gb|AEC02667.1| regulator of chromosome condensation RCC1 [Sphaerochaeta coccoides
DSM 17374]
Length = 742
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 117/380 (30%), Positives = 163/380 (42%), Gaps = 58/380 (15%)
Query: 23 IYVWGYNHSGQTGR----KGRERQLRIP---KQLPPELFGCPAGANSRWLDIACGHEHTA 75
++ GYN+ GQ G G R +P P S + HT
Sbjct: 375 LWATGYNYYGQLGLGDSGSGTNRSTPVPVTSMNADPSNPAVAISVGSLAYNGTAYLSHTM 434
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF---VKSISCGAHCTAAIAEP 132
+ D TL+ G N++G LGDGT R P +VK F VK++S G + T +
Sbjct: 435 ILKKDSTLWATGYNQYGSLGDGTTTNRSTPVQVKDNAGGFMTDVKAVSAGVYHTMIL--- 491
Query: 133 RENDGTISTSRLWVWGQNQGSNFPRLFWG---AFTPN------TIICQVSCGSVHVVALS 183
+ DGT LW G+N NF +L G +T + T + VS G+ H + L
Sbjct: 492 -QKDGT-----LWATGRN---NFGQLGVGEANTYTTSIPVQVMTDVAAVSAGNSHTIILK 542
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
G L A GYN +GQLG G T P +K D + + + VS G YH+ +
Sbjct: 543 TDGTLWATGYNNFGQLGDG-TMANKNTPVRVK---DTTDGSGFMTDVAAVSAGAYHTMIL 598
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGI-FIKDVA---CGGVHSCAL 298
NG ++ G S GQLG + + P RV DG F+ DVA G H+ L
Sbjct: 599 KNNGTLWATGFNSAGQLGDGTTTN---RSTPVRVKDTTDGSGFMTDVAAVSVGNAHTMIL 655
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG--VQLVACGHSH 356
G L+A G + G+LG G T +N P+ V G V V+ G +H
Sbjct: 656 KKDGTLWATGQNSDGRLGDGSTTS-------------KNTPVQVSSMGADVAAVSAGENH 702
Query: 357 TLVYMRDGRIHGWGYNSYGQ 376
T++ +D + GYN YGQ
Sbjct: 703 TMILKKDLTLWATGYNYYGQ 722
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 156/385 (40%), Gaps = 57/385 (14%)
Query: 63 RWLDIACGHEHTAAVASDGTLFTWGANEFGQLG---DGTEEGRKHPEKVKQLQ---SEFV 116
R ++ G +T + +DGTL+ G N +GQLG G+ R P V + S
Sbjct: 355 RVKSVSAGAYYTMILKTDGTLWATGYNYYGQLGLGDSGSGTNRSTPVPVTSMNADPSNPA 414
Query: 117 KSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQ------GSNFPRLFWGAFTPN---- 166
+IS G+ A S LW G NQ G+ R N
Sbjct: 415 VAISVGSLAYNGTAYLSHTMILKKDSTLWATGYNQYGSLGDGTTTNRSTPVQVKDNAGGF 474
Query: 167 -TIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAP 225
T + VS G H + L + G L A G N +GQLG G Y +
Sbjct: 475 MTDVKAVSAGVYHTMILQKDGTLWATGRNNFGQLGVG----------EANTYTTSI-PVQ 523
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGI- 283
+ + VS G H+ + +G ++ G + GQLG ++ + + P RV DG
Sbjct: 524 VMTDVAAVSAGNSHTIILKTDGTLWATGYNNFGQLGDGTMANKNT---PVRVKDTTDGSG 580
Query: 284 FIKDVAC---GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI 340
F+ DVA G H+ L + G L+A G + AGQLG G T R+ P+
Sbjct: 581 FMTDVAAVSAGAYHTMILKNNGTLWATGFNSAGQLGDGTTTN-------------RSTPV 627
Query: 341 LV--------VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVD 392
V V V+ G++HT++ +DG + G NS G+ + +T P V
Sbjct: 628 RVKDTTDGSGFMTDVAAVSVGNAHTMILKKDGTLWATGQNSDGRLGDGSTTSKNTPVQVS 687
Query: 393 WCVGEVRKLAAGGGHSAVLADACSL 417
+V ++AG H+ +L +L
Sbjct: 688 SMGADVAAVSAGENHTMILKKDLTL 712
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 117/280 (41%), Gaps = 59/280 (21%)
Query: 23 IYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++ G N+ GQ G + IP Q+ ++ ++ G+ HT + +DG
Sbjct: 497 LWATGRNNFGQLGVGEANTYTTSIPVQVMTDVAA-----------VSAGNSHTIILKTDG 545
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQ--SEF---VKSISCGAHCTAAIAEPREND 136
TL+ G N FGQLGDGT + P +VK S F V ++S GA+ T + +N+
Sbjct: 546 TLWATGYNNFGQLGDGTMANKNTPVRVKDTTDGSGFMTDVAAVSAGAYHTMIL----KNN 601
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTP------------NTIICQVSCGSVH 178
GT LW G N G+ R TP T + VS G+ H
Sbjct: 602 GT-----LWATGFNSAGQLGDGTTTNR-----STPVRVKDTTDGSGFMTDVAAVSVGNAH 651
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
+ L + G L A G N G+LG G T +V A + VS GE
Sbjct: 652 TMILKKDGTLWATGQNSDGRLGDGSTTSKNTPVQVSSMGA----------DVAAVSAGEN 701
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
H+ + ++ ++ G GQLG SG+ + P +VV
Sbjct: 702 HTMILKKDLTLWATGYNYYGQLGLGDSGSGNNRITPEQVV 741
>gi|222528951|ref|YP_002572833.1| chromosome condensation regulator RCC1 [Caldicellulosiruptor bescii
DSM 6725]
gi|222455798|gb|ACM60060.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
bescii DSM 6725]
Length = 743
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 112/406 (27%), Positives = 181/406 (44%), Gaps = 65/406 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I ++ WGYN GQ G G + IP ++ L A ++ G H+ A
Sbjct: 57 IKDDGTVWAWGYNGFGQLGN-GTYKDSCIPVRVKG-LKDVVA--------VSAGTFHSLA 106
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG+++ WG +GQ P KVK+L++ + +I+ G + A+ D
Sbjct: 107 LKKDGSVWIWGHTNYGQRKSDVYRDFTTPVKVKELKN--IVAIAAGWDFSLAVGS----D 160
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI---------ICQVSCGSVHVVALSECGL 187
G++ W WG N N L G+ P+ + + VS G H +AL G
Sbjct: 161 GSV-----WAWGIN---NHGELGIGSLKPSAVPVKVKGLKDVVAVSAGLYHSLALKRDGT 212
Query: 188 LQAWGYNEYGQLGRGITCE-GLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ +WGYNE G+LG T + + P +KG L + +S G +HS A++++
Sbjct: 213 VWSWGYNEDGELGNRPTEDYTVSVPVRVKG----------LSDVIAISAGGFHSIALNKD 262
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
G V+ WG G + + G D +P R+ L+ + +A G HS AL G ++
Sbjct: 263 GAVWIWGGGIIEKNGKI-----DNSYIPVRIRWLNKVVA--IAAGYRHSIALKDDGTVWV 315
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRI 366
WG + G LG SF L+ + +N V VA G H++ ++G I
Sbjct: 316 WGHNSYGVLGSNVGEHSFLLVQVKG---LKN---------VVAVAAGRLHSVALTKNGTI 363
Query: 367 HGWGYNSYGQAANEKSTYAW-YPSPVDWCVGEVRKLAAGGGHSAVL 411
WG N++GQ E ++++ P V W + V +A GG H+ +
Sbjct: 364 WAWGNNAFGQLGRENNSFSLNLPYKVKW-LDNVVAIATGGSHTLAI 408
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 165/360 (45%), Gaps = 48/360 (13%)
Query: 59 GANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKS 118
G N + + G HT A+ DGT++ WG N FGQLG+GT + P +VK L+ V +
Sbjct: 39 GENFKVISSGAGSLHTLAIKDDGTVWAWGYNGFGQLGNGTYKDSCIPVRVKGLKD--VVA 96
Query: 119 ISCGAHCTAAIAEPRENDGTISTSRLWVWGQ-NQGSNFPRLFWGAFTPNTI-----ICQV 172
+S G + A+ + DG++ W+WG N G ++ TP + I +
Sbjct: 97 VSAGTFHSLAL----KKDGSV-----WIWGHTNYGQRKSDVYRDFTTPVKVKELKNIVAI 147
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
+ G +A+ G + AWG N +G+LG G + + P +KG L+ +
Sbjct: 148 AAGWDFSLAVGSDGSVWAWGINNHGELGIG-SLKPSAVPVKVKG----------LKDVVA 196
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
VS G YHS A+ +G V++WG G+LG+ + +P RV L + ++ GG
Sbjct: 197 VSAGLYHSLALKRDGTVWSWGYNEDGELGNRPTEDYTVS-VPVRVKGLSDVIA--ISAGG 253
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV-PNGVQLVA 351
HS AL GA++ WGG +I IP+ + N V +A
Sbjct: 254 FHSIALNKDGAVWIWGG---------------GIIEKNGKIDNSYIPVRIRWLNKVVAIA 298
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
G+ H++ DG + WG+NSYG + +++ V + V +AAG HS L
Sbjct: 299 AGYRHSIALKDDGTVWVWGHNSYGVLGSNVGEHSFLLVQVK-GLKNVVAVAAGRLHSVAL 357
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 175/411 (42%), Gaps = 86/411 (20%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLD----IACGHEHTAAVA 78
I+ WG N GQ GR+ L +P ++ +WLD IA G HT A+
Sbjct: 363 IWAWGNNAFGQLGRENNSFSLNLPYKV-------------KWLDNVVAIATGGSHTLAIK 409
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DGT+++WGAN GQLG+GT + P VK L + + + G+ + A+ + DGT
Sbjct: 410 RDGTVWSWGANNKGQLGNGTYKSSYIPTCVKGLNNAVL--VEAGSQHSLAV----DKDGT 463
Query: 139 ISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-------------ICQVSCGSVHVVALSEC 185
+ WVWG F W I I +++ G +++ L +
Sbjct: 464 V-----WVWG------FIESVWSEKNTKDILSPLPIKIGKLNDITEIAGGLDYILVLRKD 512
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + G + Y R T + V K L ++ + ++ G +HS AV
Sbjct: 513 GNIWGCGNDFYF---RKFTDSSVS--SVTK-----LIRLDNIKNVRSIAAGYFHSLAVRT 562
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKEL----LPRRVVALDGIFIKDVACGGVHSCALTSK 301
+G V++WG +L + K L P ++ L G+ VA G HS AL
Sbjct: 563 DGTVWSWG--------DTNLDNKKKYLNFSEKPVKIKGLSGVV--KVAAGKYHSLALKKD 612
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV-PNGVQLVACGHSHTLVY 360
G +++WG + GQLG G + SF +P+ V N V +A G H++
Sbjct: 613 GTVWSWGYNAYGQLGNGTRETSF-------------VPVRVKGLNNVVAIAAGDYHSMAL 659
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
+DG + WG N GQ ++ P V+ + V +AAG HS L
Sbjct: 660 KKDGTVWVWGSNIRGQLGRRNIEFSTVPLKVE-KLDNVVAIAAGDTHSVAL 709
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 163/363 (44%), Gaps = 68/363 (18%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+++ WG N+ G+ G + P +P ++ G + ++ G H+ A+ DG
Sbjct: 162 SVWAWGINNHGELGIGSLK-----PSAVPVKVKGLKDV-----VAVSAGLYHSLALKRDG 211
Query: 82 TLFTWGANEFGQLGDGTEEGR--KHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
T+++WG NE G+LG+ E P +VK L V +IS G + A+ DG +
Sbjct: 212 TVWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSD--VIAISAGGFHSIAL----NKDGAV 265
Query: 140 STSRLWVW--------GQNQGSNFP-RLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
W+W G+ S P R+ W N ++ ++ G H +AL + G +
Sbjct: 266 -----WIWGGGIIEKNGKIDNSYIPVRIRW----LNKVVA-IAAGYRHSIALKDDGTVWV 315
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG+N YG LG + L + L+ + V+ G HS A+++NG ++
Sbjct: 316 WGHNSYGVLGSNVGEHSF-----------LLVQVKGLKNVVAVAAGRLHSVALTKNGTIW 364
Query: 251 TWGLGSVGQLGHCSLQSGDKEL-LPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
WG + GQLG ++ L LP +V LD + +A GG H+ A+ G +++WG
Sbjct: 365 AWGNNAFGQLGR---ENNSFSLNLPYKVKWLDNVVA--IATGGSHTLAIKRDGTVWSWGA 419
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV-PNGVQLVACGHSHTLVYMRDGRIHG 368
+ GQLG G S+ IP V N LV G H+L +DG +
Sbjct: 420 NNKGQLGNGTYKSSY-------------IPTCVKGLNNAVLVEAGSQHSLAVDKDGTVWV 466
Query: 369 WGY 371
WG+
Sbjct: 467 WGF 469
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 114/450 (25%), Positives = 182/450 (40%), Gaps = 114/450 (25%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLD----IACGHEHTAAV 77
A+++WG G + G+ IP ++ RWL+ IA G+ H+ A+
Sbjct: 264 AVWIWG---GGIIEKNGKIDNSYIPVRI-------------RWLNKVVAIAAGYRHSIAL 307
Query: 78 ASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG 137
DGT++ WG N +G LG E +VK L++ V +++ G + A+ + +G
Sbjct: 308 KDDGTVWVWGHNSYGVLGSNVGEHSFLLVQVKGLKN--VVAVAAGRLHSVALTK----NG 361
Query: 138 TISTSRLWVWGQNQGSNFPRLFWGAFTPNT--------IICQVSCGSVHVVALSECGLLQ 189
TI W WG N R +F+ N + ++ G H +A+ G +
Sbjct: 362 TI-----WAWGNNAFGQLGREN-NSFSLNLPYKVKWLDNVVAIATGGSHTLAIKRDGTVW 415
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
+WG N GQLG G T + P +KG L V G HS AV ++G V
Sbjct: 416 SWGANNKGQLGNG-TYKSSYIPTCVKG----------LNNAVLVEAGSQHSLAVDKDGTV 464
Query: 250 YTWGLG------------------SVGQLGHCSLQSG--DKELLPRR------------- 276
+ WG +G+L + +G D L+ R+
Sbjct: 465 WVWGFIESVWSEKNTKDILSPLPIKIGKLNDITEIAGGLDYILVLRKDGNIWGCGNDFYF 524
Query: 277 -------------VVALDGIF-IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
++ LD I ++ +A G HS A+ + G +++WG +
Sbjct: 525 RKFTDSSVSSVTKLIRLDNIKNVRSIAAGYFHSLAVRTDGTVWSWGDT------------ 572
Query: 323 SFSLIPNESDTYFRNIPILVV-PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEK 381
+L + F P+ + +GV VA G H+L +DG + WGYN+YGQ N
Sbjct: 573 --NLDNKKKYLNFSEKPVKIKGLSGVVKVAAGKYHSLALKKDGTVWSWGYNAYGQLGNGT 630
Query: 382 STYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
++ P V + V +AAG HS L
Sbjct: 631 RETSFVPVRVK-GLNNVVAIAAGDYHSMAL 659
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 173/395 (43%), Gaps = 59/395 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WGYN G+ G + E +P + G S + I+ G H+ A+ DG
Sbjct: 213 VWSWGYNEDGELGNRPTEDY---TVSVPVRVKGL-----SDVIAISAGGFHSIALNKDGA 264
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG + +G + P +++ L V +I+ G + A+ ++DGT+
Sbjct: 265 VWIWGGGIIEK--NGKIDNSYIPVRIRWLNK--VVAIAAGYRHSIAL----KDDGTV--- 313
Query: 143 RLWVWGQNQ----GSNFPRLFWGAFTPNTI--ICQVSCGSVHVVALSECGLLQAWGYNEY 196
WVWG N GSN + + + V+ G +H VAL++ G + AWG N +
Sbjct: 314 --WVWGHNSYGVLGSNVGEHSFLLVQVKGLKNVVAVAAGRLHSVALTKNGTIWAWGNNAF 371
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLGR L P +K L+ + ++ G H+ A+ +G V++WG +
Sbjct: 372 GQLGRENNSFSLNLPYKVK----------WLDNVVAIATGGSHTLAIKRDGTVWSWGANN 421
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
GQLG+ + +S +P V L+ + V G HS A+ G ++ WG ++
Sbjct: 422 KGQLGNGTYKS---SYIPTCVKGLNNAVL--VEAGSQHSLAVDKDGTVWVWGFIES---- 472
Query: 317 LGPQTRSFSLIPNESDT--YFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWGYNS 373
+ +E +T +PI + N + +A G + LV +DG I G G +
Sbjct: 473 ----------VWSEKNTKDILSPLPIKIGKLNDITEIAGGLDYILVLRKDGNIWGCGNDF 522
Query: 374 YGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
Y + + S + + VR +AAG HS
Sbjct: 523 YFRKFTDSSVSSVTKLIRLDNIKNVRSIAAGYFHS 557
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 143/347 (41%), Gaps = 90/347 (25%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I ++ WG N+ GQ G G + IP C G N+ L + G +H+ A
Sbjct: 408 IKRDGTVWSWGANNKGQLGN-GTYKSSYIPT--------CVKGLNNAVL-VEAGSQHSLA 457
Query: 77 VASDGTLFTWGANE------------------FGQLGDGTEEG----------------- 101
V DGT++ WG E G+L D TE
Sbjct: 458 VDKDGTVWVWGFIESVWSEKNTKDILSPLPIKIGKLNDITEIAGGLDYILVLRKDGNIWG 517
Query: 102 -------RKHPE-------KVKQLQS-EFVKSISCGAHCTAAIAEPRENDGTISTSRLWV 146
RK + K+ +L + + V+SI+ G + A+ DGT+ W
Sbjct: 518 CGNDFYFRKFTDSSVSSVTKLIRLDNIKNVRSIAAGYFHSLAV----RTDGTV-----WS 568
Query: 147 WGQNQGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGR 201
WG N + + P I + +V+ G H +AL + G + +WGYN YGQLG
Sbjct: 569 WGDTNLDNKKKYLNFSEKPVKIKGLSGVVKVAAGKYHSLALKKDGTVWSWGYNAYGQLGN 628
Query: 202 GITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG 261
G T E P +KG L + ++ G+YHS A+ ++G V+ WG GQLG
Sbjct: 629 G-TRETSFVPVRVKG----------LNNVVAIAAGDYHSMALKKDGTVWVWGSNIRGQLG 677
Query: 262 HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
+++ +P +V LD + +A G HS AL G ++ WG
Sbjct: 678 RRNIEF---STVPLKVEKLDNVVA--IAAGDTHSVALKKDGTVWVWG 719
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 92/196 (46%), Gaps = 33/196 (16%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
IA G+ H+ AV +DGT+++WG K P K+K L V ++ G + +
Sbjct: 550 IAAGYFHSLAVRTDGTVWSWGDTNLDNKKKYLNFSEK-PVKIKGLSG--VVKVAAGKYHS 606
Query: 127 AAIAEPRENDGTISTSRLWVWGQN---QGSNFPRLFWGAFTPNTI-----ICQVSCGSVH 178
A+ + DGT+ W WG N Q N R +F P + + ++ G H
Sbjct: 607 LAL----KKDGTV-----WSWGYNAYGQLGNGTRE--TSFVPVRVKGLNNVVAIAAGDYH 655
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
+AL + G + WG N GQLGR R I+ ++ + +L+ + ++ G+
Sbjct: 656 SMALKKDGTVWVWGSNIRGQLGR----------RNIE-FSTVPLKVEKLDNVVAIAAGDT 704
Query: 239 HSAAVSENGEVYTWGL 254
HS A+ ++G V+ WG+
Sbjct: 705 HSVALKKDGTVWVWGI 720
>gi|72391922|ref|XP_846255.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62359875|gb|AAX80302.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70802791|gb|AAZ12696.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 639
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 115/397 (28%), Positives = 180/397 (45%), Gaps = 80/397 (20%)
Query: 9 ETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIA 68
E RP+ + ++ WG G+ G + R P + FG +D+A
Sbjct: 147 EPERPM----RRQLLFSWGSGSCGELGTQ-RFEDCNTPTFVQITPFGV------HVVDVA 195
Query: 69 CGHEHTAAVASDGTLFTWGANEFGQLGDG-TEEGRKHPE------KVKQLQSEFVKSISC 121
G ++ +ASDG ++T+G ++GQLG G T E +HPE V Q S F + +
Sbjct: 196 LGASYSCVLASDGNVYTFGNGDWGQLGLGHTPEVEQHPEDTTTVVTVPQRISMFEREPAV 255
Query: 122 GAHCTAAIAEPRENDGTISTSRLWVWGQN---QGSNFPRLFWGAFT----PNTI------ 168
A A D ++ WG N Q PR F + P +
Sbjct: 256 HVAAGYAFAVALTAD-----HHVYFWGNNNHGQSGLGPRSFHCSLRKVEEPTLVTTLEGK 310
Query: 169 -ICQVSCGSVHVVALSECGLLQAWGY----------------NEYGQLGRGITCEG---L 208
I Q+SCGS +AL G L +WG + +G+ ++ E +
Sbjct: 311 HIEQLSCGSFFTLALGTDGTLYSWGLLDCLGLGSEAEVRASVTDISIIGKSLSAEERTVV 370
Query: 209 QGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSG 268
P+V++ P K+ ++ G++HS A++ GE++TWG+G G+LGH G
Sbjct: 371 LEPQVVR--------VPTEHKLVRIHAGQWHSGAINAAGELFTWGVGYQGRLGH-----G 417
Query: 269 DK--ELLPRRVV-ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
D + P++VV AL G + DVACG H+ ALT +GA+Y WG + +GQ G P T + +
Sbjct: 418 DNGPVMRPKKVVGALTGRHVVDVACGSFHTVALTDRGAVYCWGDNTSGQCGARPTTDTIT 477
Query: 326 LIPNESDTYFRNIPILVVPNGV-QLVACGHSHTLVYM 361
+ +R + + V GV + +ACG HT+V M
Sbjct: 478 -------SPYRVVNLEFVAGGVARAIACGRQHTVVVM 507
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 105/258 (40%), Gaps = 45/258 (17%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG N+ GQ+G R + K P L G + L +CG T A
Sbjct: 267 LTADHHVYFWGNNNHGQSGLGPRSFHCSLRKVEEPTLVTTLEGKHIEQL--SCGSFFTLA 324
Query: 77 VASDGTLFTWGANEFGQLGDGTE------------EGRKHPEKVKQLQSEFVKSISCGAH 124
+ +DGTL++WG + LG E + E+ L+ + V+ + H
Sbjct: 325 LGTDGTLYSWGLLDCLGLGSEAEVRASVTDISIIGKSLSAEERTVVLEPQVVRVPT--EH 382
Query: 125 CTAAIAEPRENDGTISTS-RLWVW----------GQNQGSNFPRLFWGAFTPNTIICQVS 173
I + + G I+ + L+ W G N P+ GA T ++ V+
Sbjct: 383 KLVRIHAGQWHSGAINAAGELFTWGVGYQGRLGHGDNGPVMRPKKVVGALTGRHVV-DVA 441
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP-RVIKGYAKFLDEAPELEKIT- 231
CGS H VAL++ G + WG N GQ G T + + P RV+ LE +
Sbjct: 442 CGSFHTVALTDRGAVYCWGDNTSGQCGARPTTDTITSPYRVVN-----------LEFVAG 490
Query: 232 ----QVSCGEYHSAAVSE 245
++CG H+ V E
Sbjct: 491 GVARAIACGRQHTVVVME 508
>gi|444918725|ref|ZP_21238787.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444709515|gb|ELW50526.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 394
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 110/361 (30%), Positives = 156/361 (43%), Gaps = 79/361 (21%)
Query: 72 EHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
+HT A+ +DG+++ WG N+ QLGD T R P +V L V+S++ G + A+
Sbjct: 69 QHTLALRTDGSVWAWGRNDAAQLGDETVVNRSAPTRVAGLSG--VQSVASGYFQSLALG- 125
Query: 132 PRENDGTISTSRLWVWGQNQGSN-------FPRL-----------------------FWG 161
DG++ W WG S+ P L FWG
Sbjct: 126 ---GDGSV-----WAWGLTNSSDIQMTPAKLPELSDIIAISAGTFHSLALQQSGSVWFWG 177
Query: 162 AF------TPNTI-----ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQG 210
TP + I ++ G+ H +AL + G++ AWG N GQLG G E
Sbjct: 178 ELLDQSSDTPVLVEGLSGITTIAAGNSHSLALDKSGVVWAWGDNTLGQLGNGTQDESTT- 236
Query: 211 PRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK 270
P ++G L I ++ G HS A+ V+TWG GQLG+ + G
Sbjct: 237 PVKVQG----------LPTIKLIAAGGAHSLALDTENRVWTWGSNDEGQLGNGN--KGGL 284
Query: 271 ELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNE 330
LP +V+ L +K +A G HS ALT+ G + AWG AGQLG + L P E
Sbjct: 285 RTLPIQVLNLKD--VKQLAAGIRHSLALTNDGNVMAWGSDSAGQLGDDLSLKE-QLSPVE 341
Query: 331 SDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSP 390
+ + I I + GHSH+L + +G + WG NSYGQ T P P
Sbjct: 342 TSSLTNVIAI----------SAGHSHSLALLSNGALFAWGSNSYGQLGGSTPTMP-IPLP 390
Query: 391 V 391
V
Sbjct: 391 V 391
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 92/203 (45%), Gaps = 30/203 (14%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHC 125
IA G+ H+ A+ G ++ WG N GQLG+GT++ P KV+ L + +K I+ GAH
Sbjct: 199 IAAGNSHSLALDKSGVVWAWGDNTLGQLGNGTQDESTTPVKVQGLPT--IKLIAAGGAHS 256
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-------ICQVSCGSVH 178
A E +R+W WG N G I + Q++ G H
Sbjct: 257 LALDTE----------NRVWTWGSNDEGQLGNGNKGGLRTLPIQVLNLKDVKQLAAGIRH 306
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
+AL+ G + AWG + GQLG ++ + P E L + +S G
Sbjct: 307 SLALTNDGNVMAWGSDSAGQLGDDLSLKEQLSPV----------ETSSLTNVIAISAGHS 356
Query: 239 HSAAVSENGEVYTWGLGSVGQLG 261
HS A+ NG ++ WG S GQLG
Sbjct: 357 HSLALLSNGALFAWGSNSYGQLG 379
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 9/76 (11%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+ WG + +GQ G L + +QL P + + + I+ GH H+ A+ S+G
Sbjct: 316 VMAWGSDSAGQLGDD-----LSLKEQLSP----VETSSLTNVIAISAGHSHSLALLSNGA 366
Query: 83 LFTWGANEFGQLGDGT 98
LF WG+N +GQLG T
Sbjct: 367 LFAWGSNSYGQLGGST 382
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 19/128 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G G + LR LP ++ +A G H+ A+ +DG
Sbjct: 265 VWTWGSNDEGQLG-NGNKGGLRT---LPIQVLNLKDVKQ-----LAAGIRHSLALTNDGN 315
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ WG++ GQLGD ++ V+ V +IS G + A+ +S
Sbjct: 316 VMAWGSDSAGQLGDDLSL-KEQLSPVETSSLTNVIAISAGHSHSLAL---------LSNG 365
Query: 143 RLWVWGQN 150
L+ WG N
Sbjct: 366 ALFAWGSN 373
>gi|159037224|ref|YP_001536477.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157916059|gb|ABV97486.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 558
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 128/469 (27%), Positives = 180/469 (38%), Gaps = 70/469 (14%)
Query: 19 AKSAIYVWGYNHSGQTGRKGR-ERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAV 77
A I WG N+ GQ G R + LPP+ + +A G H+ A+
Sbjct: 55 ASDTILAWGANNVGQLGDGSTIARNAPVAVSLPPD---------TTVTAVAGGDSHSLAL 105
Query: 78 ASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG 137
S G + WG N FGQLG G P V V +I+ + A+
Sbjct: 106 TSAGAVLAWGENNFGQLGTGNNLNSSVPITVALPPDTTVVAIAASHGHSLALT------- 158
Query: 138 TISTSRLWVWGQNQ----------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
S + WG N SN P P T + ++ G+ H +A++ G
Sbjct: 159 --SAGAVLAWGANNVGQLGNGNTFNSNTPVTV--NLPPGTTVATIAAGTNHSLAITSTGA 214
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
AWG N GQLG T L+ P IT ++ G +S A++ G
Sbjct: 215 ALAWGGNGNGQLGNNSTATSLE---------PIAVTLPPSTTITAIAAGSSYSLAITSTG 265
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
WG S GQLG + L+P V G I +A G HS A+TS G AW
Sbjct: 266 TALAWGGNSNGQLGT---GNNADSLIPIAVALPPGTTITSIAAGFTHSLAVTSTGTALAW 322
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQLVAC--GHSHTLVYMRDG 364
GG+ GQLG+G T S + P++V +P + G H+L M G
Sbjct: 323 GGNSRGQLGIGTTTNS-------------DTPVIVNLPPDTTITTNDGGFFHSLGSMSTG 369
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSLKEL--- 420
WG N GQ +T + P V G ++ +AAGGGHS L + L
Sbjct: 370 AALAWGNNFSGQLGTGNNTNSLDPIAVALPSGTKITTIAAGGGHSLALVAPPTSTTLQVT 429
Query: 421 -------CEFRLAESVTLSNASEIEDVASRTGSEALARLCERLREHSLH 462
+ L +VT + + + R+ S ALA + + H
Sbjct: 430 PPNPTVGQDVTLTAAVTCNVDTPTGTITFRSNSTALATVPLTASSTATH 478
>gi|113205520|ref|NP_001037872.1| retinitis pigmentosa GTPase regulator [Xenopus (Silurana)
tropicalis]
gi|77808103|gb|ABB03733.1| RPGR 1-19 isoform [Xenopus (Silurana) tropicalis]
Length = 729
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 129/413 (31%), Positives = 188/413 (45%), Gaps = 43/413 (10%)
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
N + I+CG EHT V +G L+ +G+N +GQLG P VK L+SE V +
Sbjct: 36 NDKPARISCGDEHTVLVTGNGKLYVFGSNNWGQLGVEAGSAISKPTCVKALKSEKVVLAA 95
Query: 121 CGAHCTAAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVH 178
CG H T E + + G S +L + ++F + + FT I Q+S GS
Sbjct: 96 CGRHHTLVYTEQGKLYSSGGNSEGQLGLGDTAGRTSFQEISF--FTAQYKIKQLSAGSNM 153
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
AL+ G L WG N GQL GL+ + K P I +SCG Y
Sbjct: 154 SAALTVDGKLFMWGDNSEGQL-------GLEKGTIYCTPQKVDTGKP----IAWISCGYY 202
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
HSA V+++GE+YT+G G+LG K P+RV+ L G + V+CGG H+ A+
Sbjct: 203 HSAFVTQDGELYTFGEPENGKLG-LPPDKIKKHKKPQRVLGLSGK-VTMVSCGGEHTIAV 260
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFSL-IPNESDTYFRNIPILVVPNGVQLVACGHSHT 357
T K +Y +G Q GQLG G T F IP D + ++ V CG +HT
Sbjct: 261 TEK-EVYTFGLGQFGQLGHG--TFIFETHIPKAVDA--------LTKKKIRYVTCGENHT 309
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV---DWCVGEVRKLAAGGGHSAVLA-- 412
+ G ++ +G +G+ + + P+ ++ V+ +A GG H V A
Sbjct: 310 AIITEKGLLYTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACGGCHMLVFATP 369
Query: 413 -----DACSLKELCEFRLAESVTLSNASEIEDVASRTGSEALARLCERLREHS 460
+ EL E RL +L+ SE+ R+ S ARL R +E S
Sbjct: 370 RPQESEVIINDELKENRLV-VPSLNGDSEMSTSLQRSHS---ARLRRREKETS 418
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 90/199 (45%), Gaps = 48/199 (24%)
Query: 23 IYVWGYNHSGQTG-RKGRERQLRIPKQLPPELFGCPAGANS----RWLDIACGHEHTAAV 77
+++WG N GQ G KG ++ P ++ W I+CG+ H+A V
Sbjct: 163 LFMWGDNSEGQLGLEKGT-------------IYCTPQKVDTGKPIAW--ISCGYYHSAFV 207
Query: 78 ASDGTLFTWGANEFGQLGDGTEEGRKH--PEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
DG L+T+G E G+LG ++ +KH P++V L + V +SCG T A+ E
Sbjct: 208 TQDGELYTFGEPENGKLGLPPDKIKKHKKPQRVLGLSGK-VTMVSCGGEHTIAVTE---- 262
Query: 136 DGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQ------------VSCGSVHVVALS 183
++ +G Q F +L G F T I + V+CG H ++
Sbjct: 263 ------KEVYTFGLGQ---FGQLGHGTFIFETHIPKAVDALTKKKIRYVTCGENHTAIIT 313
Query: 184 ECGLLQAWGYNEYGQLGRG 202
E GLL +G +G+LG G
Sbjct: 314 EKGLLYTFGDGRHGKLGLG 332
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 20/168 (11%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y +G +G+ G +I K P+ G + + ++CG EHT AV ++
Sbjct: 213 LYTFGEPENGKLGLPPD----KIKKHKKPQRV---LGLSGKVTMVSCGGEHTIAV-TEKE 264
Query: 83 LFTWGANEFGQLGDGTEEGRKH-PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
++T+G +FGQLG GT H P+ V L + ++ ++CG + TA I E G + T
Sbjct: 265 VYTFGLGQFGQLGHGTFIFETHIPKAVDALTKKKIRYVTCGENHTAIITE----KGLLYT 320
Query: 142 ------SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALS 183
+L + +N + F + F T+ V+CG H++ +
Sbjct: 321 FGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQS-VACGGCHMLVFA 367
>gi|345323388|ref|XP_001508293.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4
[Ornithorhynchus anatinus]
Length = 1006
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/245 (33%), Positives = 123/245 (50%), Gaps = 21/245 (8%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I VSCG H +AL++ G + AWG + GQLG T E ++ PR IK +
Sbjct: 35 IVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECIRVPRNIKSLSDI-------- 86
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
+I QVSCG YHS A+S+ EV++WG GQLG K+ P+ + +L GI +
Sbjct: 87 QIVQVSCGYYHSLALSKGSEVFSWGQNKYGQLGLGF--EFKKQTSPQLIKSLLGIPFMQI 144
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
A GG HS LT GA++ WG ++ GQLGL +E+D Y N+ + +
Sbjct: 145 AAGGAHSFVLTLSGAIFGWGRNKFGQLGLN----------DENDRYVPNLLKSLRSQKIV 194
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGH 407
+ CG HT ++G + +G YGQ + +++ P V +G V ++A G H
Sbjct: 195 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQH 254
Query: 408 SAVLA 412
++
Sbjct: 255 TSAFV 259
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 130/265 (49%), Gaps = 36/265 (13%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
++CG HT A+ G ++ WG + GQLG GTEE + P +K L + +SCG +
Sbjct: 38 VSCGDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECIRVPRNIKSLSDIQIVQVSCGYYH 97
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQ----GSNFPRLFWGAFTPNTI-------ICQVSC 174
+ A+++ S ++ WGQN+ G F F +P I Q++
Sbjct: 98 SLALSK---------GSEVFSWGQNKYGQLGLGFE--FKKQTSPQLIKSLLGIPFMQIAA 146
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G H L+ G + WG N++GQLG + R + K L +KI +
Sbjct: 147 GGAHSFVLTLSGAIFGWGRNKFGQLGLND-----ENDRYVPNLLKSLRS----QKIVYIC 197
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVH 294
CGE H+AA+++ G V+T+G G GQLGH S E+ PR+V L G + VACG H
Sbjct: 198 CGEDHTAALTKEGGVFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQVACGRQH 254
Query: 295 SCALT-SKGALYAWGGSQAGQLGLG 318
+ A S G +Y++G GQLG G
Sbjct: 255 TSAFVPSSGRIYSFGLGGNGQLGTG 279
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + ++CG+ H+ A++
Sbjct: 51 KGQVYAWGLDTDGQLGLPGTEECIRVPRNIK-------SLSDIQIVQVSCGYYHSLALSK 103
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F+WG N++GQLG G E + + P+ +K L F++ + GAH
Sbjct: 104 GSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKSLLGIPFMQIAAGGAHSFVL--------- 154
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 155 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 210
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQV+CG H++A V
Sbjct: 211 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQVACGRQHTSAFVPS 261
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 262 SGRIYSFGLGGNGQLG 277
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 95/190 (50%), Gaps = 12/190 (6%)
Query: 224 APELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
A + + I VSCG+ H+ A+++ G+VY WGL + GQLG + + +PR + +L I
Sbjct: 29 ALDAQNIVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECIR--VPRNIKSLSDI 86
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
I V+CG HS AL+ +++WG ++ GQLGLG F S ++ +L +
Sbjct: 87 QIVQVSCGYYHSLALSKGSEVFSWGQNKYGQLGLG-----FEFKKQTSPQLIKS--LLGI 139
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLA 402
P +A G +H+ V G I GWG N +GQ + P+ + + + +
Sbjct: 140 P--FMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYIC 197
Query: 403 AGGGHSAVLA 412
G H+A L
Sbjct: 198 CGEDHTAALT 207
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G E + + QL L G P ++ IA G H+ +
Sbjct: 105 SEVFSWGQNKYGQLGL-GFEFKKQTSPQLIKSLLGIP------FMQIAAGGAHSFVLTLS 157
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 158 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 213
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGYN 194
T +GQ N S+ PR + +I+ QV+CG H A G + ++G
Sbjct: 214 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQVACGRQHTSAFVPSSGRIYSFGLG 271
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 272 GNGQLGTGSTSNR-KSPFTVKG 292
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 70/142 (49%), Gaps = 17/142 (11%)
Query: 276 RVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYF 335
+VVALD I V+CG H+ AL KG +YAWG GQLGL P T +P
Sbjct: 26 QVVALDAQNIVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGL-PGTEECIRVP------- 77
Query: 336 RNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA----NEKSTYAWYPSPV 391
RNI L VQ V+CG+ H+L + + WG N YGQ +K T P +
Sbjct: 78 RNIKSLSDIQIVQ-VSCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQT---SPQLI 133
Query: 392 DWCVG-EVRKLAAGGGHSAVLA 412
+G ++AAGG HS VL
Sbjct: 134 KSLLGIPFMQIAAGGAHSFVLT 155
>gi|345494033|ref|XP_001605647.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Nasonia
vitripennis]
Length = 4752
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 119/420 (28%), Positives = 181/420 (43%), Gaps = 99/420 (23%)
Query: 5 EIIGE--TARPVDNIPAKSAIYVWGYNHSGQTG-RKGRERQL----RIPKQLPP------ 51
E++ E TA+ ++ +A+YVWG N Q G KG + +L + +L P
Sbjct: 2904 EVVQEQMTAQRASDVQQNAAVYVWGLNDKDQLGGLKGSKIKLPVHSEVLSKLKPIHIAGG 2963
Query: 52 -----------ELFGCPAGANSRW------------------------LDIACGHEHTAA 76
+L+ C G N R + + G +H A
Sbjct: 2964 SKTLFVVSQEGKLYACGEGTNGRLGLGDNNNVGEPKPIPFLSQYIIKKVAVHSGGKHALA 3023
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG E G+LG G P ++ L+S+ ++ I+CG+ +AAIA
Sbjct: 3024 LTQDGKVFSWGEGEDGKLGHGNRVSLDKPRLIEALKSKRIRDIACGSGHSAAIA------ 3077
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 3078 ---SNGELYTWGLGE---YGRLGHGDTTTHLKPKLVDALVGQRVIQVACGSRDAQTMALT 3131
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
E G + +WG ++G+LGRG +G P + + QV CG S A+
Sbjct: 3132 EDGSVYSWGDGDFGKLGRG-GSDGCYSPLPVDRLNGL--------GVVQVECGAQFSLAL 3182
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
++ GEV+TWG G +LGH + + P V L G + VA G +H A+T G
Sbjct: 3183 TKYGEVWTWGKGDYFRLGHGNDHHVRR---PTLVEGLRGKKVVHVAVGALHCLAVTDAGQ 3239
Query: 304 LYAWGGSQAGQLGLGPQ--TRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
+YAWG + GQ G G R SL+ N D V VACG SH++ ++
Sbjct: 3240 VYAWGDNDHGQQGNGSTMVNRKPSLVHNLEDA------------KVNRVACGSSHSIAWV 3287
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 176/406 (43%), Gaps = 64/406 (15%)
Query: 22 AIYVWGYNHSGQTG-RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
AIY WG+NH GQ G +G + +L +P C + + R + +A G + AV +D
Sbjct: 3895 AIYGWGHNHRGQLGGLEGAKVKLPLP---------CESLSALRPIQLAGGEQTLFAVTAD 3945
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDG 137
G ++ G G+LG G + P ++ +Q F+K ++ G HC A +E
Sbjct: 3946 GKVYATGYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSE------ 3999
Query: 138 TISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
++ WG+ P+L T I ++CG H A+S G
Sbjct: 4000 ----GHVYSWGEGDDGKLGHGNRITYDRPKLIEALL--GTEIVDIACGGHHSAAISSAGW 4053
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSE 245
L WG YG+LG G + + L+ P V+ + K+ V+C G+ + V++
Sbjct: 4054 LYTWGKGRYGRLGHGDSDDQLK-PTVVTALQGY--------KVIDVACGSGDAQTLCVTD 4104
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+ V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4105 DDNVWSWGDGDYGKLGR---GGSDGCKVPMKIESLAGLGVVKVECGSQFSVALTRSGAVY 4161
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLVYMRD 363
WG +LG G +D + R + G ++V A G H +
Sbjct: 4162 TWGKGDYHRLGHG------------TDDHVRRPRKVSALQGKKIVSIATGSLHCVACSDK 4209
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHS 408
G ++ WG N GQ + + P V G+ + ++A G H+
Sbjct: 4210 GEVYTWGDNDEGQLGDGTTHAQQSPRLVHALQGKNITRVACGSAHT 4255
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 162/367 (44%), Gaps = 59/367 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y GY G+ G G + + P L + + + G +H A
Sbjct: 3942 VTADGKVYATGYGALGRLGTGG------VDSVMVPTLLESIQHVFIKKVAVNSGGKHCLA 3995
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
++S+G +++WG + G+LG G P+ ++ L + I+CG H +AAI+
Sbjct: 3996 LSSEGHVYSWGEGDDGKLGHGNRITYDRPKLIEALLGTEIVDIACGGHHSAAIS------ 4049
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGS--VHVVALS 183
S L+ WG+ + + RL G P + + V+CGS + ++
Sbjct: 4050 ---SAGWLYTWGKGR---YGRLGHGDSDDQLKPTVVTALQGYKVIDVACGSGDAQTLCVT 4103
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ + +WG +YG+LGRG +G + P I+ A + +V CG S A+
Sbjct: 4104 DDDNVWSWGDGDYGKLGRG-GSDGCKVPMKIESLAGL--------GVVKVECGSQFSVAL 4154
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+ +G VYTWG G +LGH + D PR+V AL G I +A G +H A + KG
Sbjct: 4155 TRSGAVYTWGKGDYHRLGH---GTDDHVRRPRKVSALQGKKIVSIATGSLHCVACSDKGE 4211
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 360
+Y WG + GQLG G T+ + P LV + VACG +HTL +
Sbjct: 4212 VYTWGDNDEGQLGDG-------------TTHAQQSPRLVHALQGKNITRVACGSAHTLAW 4258
Query: 361 MRDGRIH 367
H
Sbjct: 4259 STTKATH 4265
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 134/292 (45%), Gaps = 35/292 (11%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P+L G + +DIACG H+AA++S G
Sbjct: 4002 VYSWGEGDDGKLGHGNRITYDR------PKLIEALLG--TEIVDIACGGHHSAAISSAGW 4053
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG G + + P V LQ V ++CG+ + +++
Sbjct: 4054 LYTWGKGRYGRLGHGDSDDQLKPTVVTALQGYKVIDVACGSGDAQTLCVTDDDN------ 4107
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
+W WG R G P I + +V CGS VAL+ G + WG
Sbjct: 4108 -VWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVVKVECGSQFSVALTRSGAVYTWGKG 4166
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G T + ++ PR + A + +KI ++ G H A S+ GEVYTWG
Sbjct: 4167 DYHRLGHG-TDDHVRRPRKV--------SALQGKKIVSIATGSLHCVACSDKGEVYTWGD 4217
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
GQLG + + PR V AL G I VACG H+ A ++ A ++
Sbjct: 4218 NDEGQLGDGTTHAQQS---PRLVHALQGKNITRVACGSAHTLAWSTTKATHS 4266
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 134/277 (48%), Gaps = 43/277 (15%)
Query: 72 EHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
+H A+ + G +++WG + G+LG G P+ ++ L V I+CG+ +AAI+
Sbjct: 511 KHYLALTTKGIVYSWGNGDGGRLGHGDSFSCDEPQVIEVLSDRTVTYIACGSTYSAAIS- 569
Query: 132 PRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-----------ICQVSCGS--VH 178
ST L WG+ ++ RL G +I + V+CGS
Sbjct: 570 --------STGELLTWGRG---SYGRLGHGICDDISIPTVVTALNGHTVTHVACGSGDSQ 618
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
+ ++ G++ +WG +YG+LGRG G G ++ K K LD + + +V CG
Sbjct: 619 TLCVTNSGIVFSWGDGDYGKLGRG----GSDGSKLPKIVDKLLD-----QNVVKVFCGGQ 669
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHSC 296
SAA++ +GEVYTWG G +LGH G++E P+ V L ++D++ G +H
Sbjct: 670 FSAALTAHGEVYTWGKGDHYRLGH-----GNEEHVRFPKLVEGLRNKKVRDLSVGNLHIL 724
Query: 297 ALTSKGALYAWGGSQAGQL--GLGPQTRSFSLIPNES 331
A+T +Y WG + A Q+ LG +L P S
Sbjct: 725 AITEDQLVYGWGRNDACQIDPSLGAVVSEPTLCPTLS 761
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 121/259 (46%), Gaps = 30/259 (11%)
Query: 144 LWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNE 195
++VWG N +GS ++ GS + +S+ G L A G
Sbjct: 2924 VYVWGLNDKDQLGGLKGSKIKLPVHSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGT 2983
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
G+LG G + P+ I ++++ ++K+ V G H+ A++++G+V++WG G
Sbjct: 2984 NGRLGLGDN-NNVGEPKPIPFLSQYI-----IKKVA-VHSGGKHALALTQDGKVFSWGEG 3036
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
G+LGH + S DK PR + AL I+D+ACG HS A+ S G LY WG + G+L
Sbjct: 3037 EDGKLGHGNRVSLDK---PRLIEALKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRL 3093
Query: 316 GLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRDGRIHGWGYNS 373
G G T L P D +V V VACG + T+ DG ++ WG
Sbjct: 3094 GHGDTTT--HLKPKLVDA--------LVGQRVIQVACGSRDAQTMALTEDGSVYSWGDGD 3143
Query: 374 YGQAANEKSTYAWYPSPVD 392
+G+ S + P PVD
Sbjct: 3144 FGKLGRGGSDGCYSPLPVD 3162
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 95/210 (45%), Gaps = 24/210 (11%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ ++CGS + A+S G L WG YG+LG GI C+ + P V+
Sbjct: 555 VTYIACGSTYSAAISSTGELLTWGRGSYGRLGHGI-CDDISIPTVVTALNG--------H 605
Query: 229 KITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
+T V+CG + + V+ +G V++WG G G+LG D LP+ V L +
Sbjct: 606 TVTHVACGSGDSQTLCVTNSGIVFSWGDGDYGKLGR---GGSDGSKLPKIVDKLLDQNVV 662
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
V CGG S ALT+ G +Y WG +LG G NE F + +
Sbjct: 663 KVFCGGQFSAALTAHGEVYTWGKGDHYRLGHG----------NEEHVRFPKLVEGLRNKK 712
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
V+ ++ G+ H L D ++GWG N Q
Sbjct: 713 VRDLSVGNLHILAITEDQLVYGWGRNDACQ 742
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 120/262 (45%), Gaps = 34/262 (12%)
Query: 153 SNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG--ITCEGLQG 210
+ +P+ +G F + + H +AL+ G++ +WG + G+LG G +C+
Sbjct: 488 TQYPQSVYG-FADDVVQIASHPDGKHYLALTTKGIVYSWGNGDGGRLGHGDSFSCDE--- 543
Query: 211 PRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH--CSLQSG 268
P+VI+ + +T ++CG +SAA+S GE+ TWG GS G+LGH C
Sbjct: 544 PQVIEVLSD--------RTVTYIACGSTYSAAISSTGELLTWGRGSYGRLGHGIC----- 590
Query: 269 DKELLPRRVVALDGIFIKDVACGGVHSCAL--TSKGALYAWGGSQAGQLGLGPQTRSFSL 326
D +P V AL+G + VACG S L T+ G +++WG G+LG G S
Sbjct: 591 DDISIPTVVTALNGHTVTHVACGSGDSQTLCVTNSGIVFSWGDGDYGKLGRG--GSDGSK 648
Query: 327 IPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAW 386
+P D ++ V V CG + G ++ WG + + + +
Sbjct: 649 LPKIVDK--------LLDQNVVKVFCGGQFSAALTAHGEVYTWGKGDHYRLGHGNEEHVR 700
Query: 387 YPSPVDWCVG-EVRKLAAGGGH 407
+P V+ +VR L+ G H
Sbjct: 701 FPKLVEGLRNKKVRDLSVGNLH 722
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 115/247 (46%), Gaps = 27/247 (10%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
Q++ G + A++ G + A GY G+LG G + + P +++ ++K+
Sbjct: 3931 QLAGGEQTLFAVTADGKVYATGYGALGRLGTG-GVDSVMVPTLLESIQHVF-----IKKV 3984
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
V+ G H A+S G VY+WG G G+LGH + + D+ P+ + AL G I D+AC
Sbjct: 3985 A-VNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRITYDR---PKLIEALLGTEIVDIAC 4040
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL- 349
GG HS A++S G LY WG + G+LG G +SD + ++ G ++
Sbjct: 4041 GGHHSAAISSAGWLYTWGKGRYGRLGHG-----------DSDDQLKPT-VVTALQGYKVI 4088
Query: 350 -VAC--GHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGG 405
VAC G + TL D + WG YG+ S P ++ G V K+ G
Sbjct: 4089 DVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVVKVECGS 4148
Query: 406 GHSAVLA 412
S L
Sbjct: 4149 QFSVALT 4155
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 103/229 (44%), Gaps = 31/229 (13%)
Query: 190 AWGYNEYGQLGRGITCEGLQGPRV-IKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG N+ QLG GL+G ++ + +++ L + K ++ G VS+ G+
Sbjct: 2926 VWGLNDKDQLG------GLKGSKIKLPVHSEVLSKL----KPIHIAGGSKTLFVVSQEGK 2975
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHSCALTSKGALYA 306
+Y G G+ G+LG L + P+ + L IK VA GG H+ ALT G +++
Sbjct: 2976 LYACGEGTNGRLG---LGDNNNVGEPKPIPFLSQYIIKKVAVHSGGKHALALTQDGKVFS 3032
Query: 307 WGGSQAGQLGLGPQTR--SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 364
WG + G+LG G + LI R+I ACG H+ +G
Sbjct: 3033 WGEGEDGKLGHGNRVSLDKPRLIEALKSKRIRDI------------ACGSGHSAAIASNG 3080
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
++ WG YG+ + +T P VD VG+ V ++A G + +A
Sbjct: 3081 ELYTWGLGEYGRLGHGDTTTHLKPKLVDALVGQRVIQVACGSRDAQTMA 3129
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 83/180 (46%), Gaps = 22/180 (12%)
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
H A++ G VY+WG G G+LGH S D+ P+ + L + +ACG +S A+
Sbjct: 512 HYLALTTKGIVYSWGNGDGGRLGHGDSFSCDE---PQVIEVLSDRTVTYIACGSTYSAAI 568
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NG--VQLVACG-- 353
+S G L WG G+LG G I ++ +IP +V NG V VACG
Sbjct: 569 SSTGELLTWGRGSYGRLGHG--------ICDDI-----SIPTVVTALNGHTVTHVACGSG 615
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
S TL G + WG YG+ S + P VD + + V K+ GG SA L
Sbjct: 616 DSQTLCVTNSGIVFSWGDGDYGKLGRGGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALT 675
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 71/172 (41%), Gaps = 16/172 (9%)
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G +Y WG GQLG G K LP +L + +A G A+T+ G +Y
Sbjct: 3893 SGAIYGWGHNHRGQLGGLE---GAKVKLPLPCESLSALRPIQLAGGEQTLFAVTADGKVY 3949
Query: 306 AWGGSQAGQLGLG--PQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 363
A G G+LG G +L+ + + + + V G H L +
Sbjct: 3950 ATGYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVA----------VNSGGKHCLALSSE 3999
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADA 414
G ++ WG G+ + P ++ +G E+ +A GG HSA ++ A
Sbjct: 4000 GHVYSWGEGDDGKLGHGNRITYDRPKLIEALLGTEIVDIACGGHHSAAISSA 4051
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 71/184 (38%), Gaps = 25/184 (13%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL-DGIFIKDV 288
+ Q+ C E +S +G+VY GS Q P+ V D +
Sbjct: 460 VKQLCCTERALLILSLSGKVYMMYYGSETQY-------------PQSVYGFADDVVQIAS 506
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
G H ALT+KG +Y+WG G+LG G SFS + + V
Sbjct: 507 HPDGKHYLALTTKGIVYSWGNGDGGRLGHG---DSFSCDEPQVIEVLSD-------RTVT 556
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGH 407
+ACG +++ G + WG SYG+ + P+ V G V +A G G
Sbjct: 557 YIACGSTYSAAISSTGELLTWGRGSYGRLGHGICDDISIPTVVTALNGHTVTHVACGSGD 616
Query: 408 SAVL 411
S L
Sbjct: 617 SQTL 620
>gi|301121999|ref|XP_002908726.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262099488|gb|EEY57540.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 2298
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 171/364 (46%), Gaps = 37/364 (10%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
+ I G+EHT + +DG +FT G N+ GQ G G H ++ ++ S S AH
Sbjct: 409 IQIGAGNEHTVVLTADGKVFTCGYNDNGQCGQGGTARVSHLSEIPKMDSG-----SSQAH 463
Query: 125 ----CTAAIAEPRENDGTISTSRLWVWGQ-----NQGSNFPRLFWGAFTPNTIICQVSCG 175
C I DG ++T GQ + P++ N I+ VSC
Sbjct: 464 AYNGCEHTILV--STDGRVATCGYNYRGQLGHGNTTSESVPKIIRSL--ENKIVRLVSCS 519
Query: 176 SVHVVALSECGLLQ---AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
H V E G LQ +G N+YGQLG + + R I + + L + ++I
Sbjct: 520 YYHTVLACEDGNLQNLYTFGRNDYGQLGHNDSID-----RKIPQFVEALSD----QQIVS 570
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACG 291
V+CG+YH+ V+ +G+ + +G GQLG + + + +L P +V L+ ++ CG
Sbjct: 571 VACGQYHTMVVTVSGKAFAFGKNDYGQLG---IDTMENQLAPVQVRGGLERQECLEIRCG 627
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV- 350
H+ AL S L+A+G + GQLGLG S + F N ++ G +V
Sbjct: 628 YYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVR 687
Query: 351 -ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHS 408
ACG HT+ +G ++ +G N++GQ +T YP P+D VG+ + +AAG H+
Sbjct: 688 IACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDFVGKRIALVAAGFYHT 747
Query: 409 AVLA 412
VL
Sbjct: 748 VVLT 751
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 164/362 (45%), Gaps = 52/362 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++ GYN +GQ G+ G R + + P++ + A++ G EHT
Sbjct: 421 LTADGKVFTCGYNDNGQCGQGGTARVSHLSE--IPKMDSGSSQAHA-----YNGCEHTIL 473
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V++DG + T G N GQLG G P+ ++ L+++ V+ +SC + T E D
Sbjct: 474 VSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLACE----D 529
Query: 137 GTISTSRLWVWGQNQ----GSN------FPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
G + L+ +G+N G N P+ F A + I+ V+CG H + ++ G
Sbjct: 530 GNLQN--LYTFGRNDYGQLGHNDSIDRKIPQ-FVEALSDQQIV-SVACGQYHTMVVTVSG 585
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
A+G N+YGQLG T E P ++G E ++ ++ CG YH+ A+
Sbjct: 586 KAFAFGKNDYGQLGID-TMENQLAPVQVRG-------GLERQECLEIRCGYYHTIALCSG 637
Query: 247 GEVYTWGLGSVGQLG--------HCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHSCA 297
++ +G GQLG +LQ + R++ L+G I +ACG H+ A
Sbjct: 638 AHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIA 697
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT 357
++ G +Y +G + GQLG G T P + V + LVA G HT
Sbjct: 698 VSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDD----------FVGKRIALVAAGFYHT 747
Query: 358 LV 359
+V
Sbjct: 748 VV 749
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 93/217 (42%), Gaps = 36/217 (16%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I Q+ G+ H V L+ G + GYN+ GQ G+G T L E P+++
Sbjct: 408 IIQIGAGNEHTVVLTADGKVFTCGYNDNGQCGQGGTAR-----------VSHLSEIPKMD 456
Query: 229 ---KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFI 285
G H+ VS +G V T G GQLGH + S E +P+ + +L+ +
Sbjct: 457 SGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQLGHGNTTS---ESVPKIIRSLENKIV 513
Query: 286 KDVACGGVHSCALTSKG---ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
+ V+C H+ G LY +G + GQLG +D+ R IP V
Sbjct: 514 RLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLG-------------HNDSIDRKIPQFV 560
Query: 343 ---VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+ VACG HT+V G+ +G N YGQ
Sbjct: 561 EALSDQQIVSVACGQYHTMVVTVSGKAFAFGKNDYGQ 597
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 14/123 (11%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLD---------IACGHEH 73
++ +G N GQ G QL + F +N+R +D IACG H
Sbjct: 640 LFAFGRNDYGQLGLGRSNASSTSNLQLQQQRF-----SNARLIDELEGKDIVRIACGCYH 694
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
T AV+ +G ++ +G N GQLG G R +P + + + ++ G + T + +
Sbjct: 695 TIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDFVGKRIALVAAGFYHTVVLTGGK 754
Query: 134 END 136
E+D
Sbjct: 755 EDD 757
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 68/165 (41%), Gaps = 12/165 (7%)
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
EV++ G S G+LGH S R+ AL I + G H+ LT+ G ++
Sbjct: 374 EVWSCGQNSYGELGHGDTASRKSF---ERIQALQQKEIIQIGAGNEHTVVLTADGKVFTC 430
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G + GQ G G R ++ IP + + G HT++ DGR+
Sbjct: 431 GYNDNGQCGQGGTARV---------SHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVA 481
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
GYN GQ + +T P + ++ +L + + VLA
Sbjct: 482 TCGYNYRGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLA 526
>gi|403370898|gb|EJY85318.1| hypothetical protein OXYTRI_16821 [Oxytricha trifallax]
Length = 821
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 115/396 (29%), Positives = 185/396 (46%), Gaps = 67/396 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCP----AGANSRWLDIACGHEHTAAVA 78
++ WG N + + G + ++ P A N + ++CG H+ A +
Sbjct: 117 VFSWGSNQNAKLGHSYYKPSPNNVSSSSIQIVKQPTIVKALENQKIDGLSCGTSHSFAWS 176
Query: 79 SD-GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF-----VKSISCGA-HCTAAIAE 131
++ G ++ WG G+LG+ E + P+ ++ L+ V ISCG H A I
Sbjct: 177 NESGLVYGWGLGLNGRLGNENEGVVQEPQVLECLKIAMEIKMKVLQISCGENHTLALIQM 236
Query: 132 PRENDGTISTSRLWVWGQNQ-----------GSN----------FP-RLFWGAFTPNT-- 167
P +N+G S ++L+VWG N G+N P +L F +T
Sbjct: 237 PPQNEGETSQNKLFVWGNNDKLQLGMDNQADGNNEDMQSAREISVPHQLDPDPFQHDTDN 296
Query: 168 -----IICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLD 222
+ V + AL+ G + WG E+G+LG + + P+V+K F
Sbjct: 297 KNYSNQLIGVHASYYYSAALTSNGNVYTWGSGEFGRLGY-MDIKKQPQPKVLKELTGF-- 353
Query: 223 EAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG 282
++T++S G YH AA++E G+V++WG G GQLGH S+ + D+ R V AL
Sbjct: 354 ------QVTRISLGYYHGAAITEQGQVFSWGRGINGQLGHGSVLNEDQ---VRPVSALQN 404
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
I I D++CG H+ ALT+KG +Y+WGG Q GQLG D +++PI V
Sbjct: 405 IHIIDISCGESHTLALTNKGEVYSWGGGQLGQLG-------------HGDFLRQSLPIKV 451
Query: 343 --VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+ + + ++ G H+ DG++ WG N YGQ
Sbjct: 452 ANLEDNIAQISAGKRHSSALTDDGKLFTWGSNEYGQ 487
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 161/403 (39%), Gaps = 76/403 (18%)
Query: 67 IACGHEHTAAVAS--DGTLFTWGANEFGQLGDGTEEGR------------KHPEKVKQLQ 112
+ CG + T + + +F+WG+N+ +LG + K P VK L+
Sbjct: 99 VICGSDQTFCITKSPENHVFSWGSNQNAKLGHSYYKPSPNNVSSSSIQIVKQPTIVKALE 158
Query: 113 SEFVKSISCG-AHCTAAIAEP---------------RENDGTISTSRLWVWGQNQGSNFP 156
++ + +SCG +H A E EN+G + ++
Sbjct: 159 NQKIDGLSCGTSHSFAWSNESGLVYGWGLGLNGRLGNENEGVVQEPQVL----------- 207
Query: 157 RLFWGAFTPNTIICQVSCGSVHVVALSEC----------GLLQAWGYNEYGQLGRGITCE 206
A + Q+SCG H +AL + L WG N+ QLG +
Sbjct: 208 ECLKIAMEIKMKVLQISCGENHTLALIQMPPQNEGETSQNKLFVWGNNDKLQLGMDNQAD 267
Query: 207 G----LQGPRVIK--------GYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
G +Q R I + D ++ V Y+SAA++ NG VYTWG
Sbjct: 268 GNNEDMQSAREISVPHQLDPDPFQHDTDNKNYSNQLIGVHASYYYSAALTSNGNVYTWGS 327
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
G G+LG+ ++ K+ P+ + L G + ++ G H A+T +G +++WG GQ
Sbjct: 328 GEFGRLGYMDIK---KQPQPKVLKELTGFQVTRISLGYYHGAAITEQGQVFSWGRGINGQ 384
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LG G + P + +NI I+ ++CG SHTL G ++ WG
Sbjct: 385 LGHGSVLNEDQVRP---VSALQNIHIID-------ISCGESHTLALTNKGEVYSWGGGQL 434
Query: 375 GQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSL 417
GQ + P V + +++AG HS+ L D L
Sbjct: 435 GQLGHGDFLRQSLPIKVANLEDNIAQISAGKRHSSALTDDGKL 477
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 129/264 (48%), Gaps = 40/264 (15%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRE----------RQLRIPKQLPPELFGCPA---GANSRWL 65
+++ ++VWG N Q G + R++ +P QL P+ F +++ +
Sbjct: 245 SQNKLFVWGNNDKLQLGMDNQADGNNEDMQSAREISVPHQLDPDPFQHDTDNKNYSNQLI 304
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
+ + ++AA+ S+G ++TWG+ EFG+LG + + P+ +K+L V IS G +
Sbjct: 305 GVHASYYYSAALTSNGNVYTWGSGEFGRLGYMDIKKQPQPKVLKELTGFQVTRISLGYYH 364
Query: 126 TAAIAEPRENDGTISTSRLWVWGQ------NQGS--NFPRLFWGAFTPNTIICQVSCGSV 177
AAI E +++ WG+ GS N ++ + N I +SCG
Sbjct: 365 GAAITE---------QGQVFSWGRGINGQLGHGSVLNEDQVRPVSALQNIHIIDISCGES 415
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H +AL+ G + +W GQLG+ + L+ IK A D I Q+S G+
Sbjct: 416 HTLALTNKGEVYSW---GGGQLGQLGHGDFLRQSLPIK-VANLED------NIAQISAGK 465
Query: 238 YHSAAVSENGEVYTWGLGSVGQLG 261
HS+A++++G+++TWG GQLG
Sbjct: 466 RHSSALTDDGKLFTWGSNEYGQLG 489
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG SG+ GR G + I KQ P++ G + I+ G+ H AA+ G
Sbjct: 322 VYTWG---SGEFGRLGY---MDIKKQPQPKVLKELTGF--QVTRISLGYYHGAAITEQGQ 373
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F+WG GQLG G+ V LQ+ + ISCG T A+ N G + +
Sbjct: 374 VFSWGRGINGQLGHGSVLNEDQVRPVSALQNIHIIDISCGESHTLALT----NKGEVYSW 429
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPN--TIICQVSCGSVHVVALSECGLLQAWGYNEYGQLG 200
GQ +F R N I Q+S G H AL++ G L WG NEYGQLG
Sbjct: 430 GGGQLGQLGHGDFLRQSLPIKVANLEDNIAQISAGKRHSSALTDDGKLFTWGSNEYGQLG 489
Query: 201 R 201
R
Sbjct: 490 R 490
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 124/290 (42%), Gaps = 60/290 (20%)
Query: 169 ICQVSCGSVHVVALSEC--GLLQAWGYNEYGQLGRGI-----------TCEGLQGPRVIK 215
I QV CGS +++ + +WG N+ +LG + + ++ P ++K
Sbjct: 96 INQVICGSDQTFCITKSPENHVFSWGSNQNAKLGHSYYKPSPNNVSSSSIQIVKQPTIVK 155
Query: 216 GYAKFLDEAPELEKITQVSCGEYHSAAVS-ENGEVYTWGLGSVGQLGHCS---LQSGDKE 271
A E +KI +SCG HS A S E+G VY WGLG G+LG+ + +Q + +
Sbjct: 156 --------ALENQKIDGLSCGTSHSFAWSNESGLVYGWGLGLNGRLGNENEGVVQ--EPQ 205
Query: 272 LLPRRVVALD-GIFIKDVACGGVHSCAL----------TSKGALYAWGGSQAGQLGLGPQ 320
+L +A++ + + ++CG H+ AL TS+ L+ WG + QLG+ Q
Sbjct: 206 VLECLKIAMEIKMKVLQISCGENHTLALIQMPPQNEGETSQNKLFVWGNNDKLQLGMDNQ 265
Query: 321 ----------TRSFSLI------PNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 364
R S+ P + DT +N N + V + ++ +G
Sbjct: 266 ADGNNEDMQSAREISVPHQLDPDPFQHDTDNKN-----YSNQLIGVHASYYYSAALTSNG 320
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
++ WG +G+ P + G +V +++ G H A + +
Sbjct: 321 NVYTWGSGEFGRLGYMDIKKQPQPKVLKELTGFQVTRISLGYYHGAAITE 370
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 89/216 (41%), Gaps = 17/216 (7%)
Query: 274 PRRVVALDGIFIKDVACGGVHSCALTS--KGALYAWGGSQAGQLGLGPQTRSFSLIPNES 331
P RV+AL+ I V CG + +T + +++WG +Q +LG S + + + S
Sbjct: 85 PERVLALEKYNINQVICGSDQTFCITKSPENHVFSWGSNQNAKLGHSYYKPSPNNVSSSS 144
Query: 332 DTYFRNIPILVVPNGVQL--VACGHSHTLVYMRD-GRIHGWGYNSYGQAANEKSTYAWYP 388
+ I+ ++ ++CG SH+ + + G ++GWG G+ NE P
Sbjct: 145 IQIVKQPTIVKALENQKIDGLSCGTSHSFAWSNESGLVYGWGLGLNGRLGNENEGVVQEP 204
Query: 389 SPVDWCVG-------EVRKLAAGGGHSAVLADACSLKELCEFRLAESVTLSNASEIE--- 438
++ C+ +V +++ G H+ L E E + N +++
Sbjct: 205 QVLE-CLKIAMEIKMKVLQISCGENHTLALIQMPPQNE-GETSQNKLFVWGNNDKLQLGM 262
Query: 439 DVASRTGSEALARLCERLREHSLHGDEFDCDDDTRN 474
D + +E + E H L D F D D +N
Sbjct: 263 DNQADGNNEDMQSAREISVPHQLDPDPFQHDTDNKN 298
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 22/137 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKG--RERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHT 74
I + ++ WG +GQ G E Q+R A N +DI+CG HT
Sbjct: 368 ITEQGQVFSWGRGINGQLGHGSVLNEDQVR----------PVSALQNIHIIDISCGESHT 417
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
A+ + G +++WG + GQLG G + P KV L+ + IS G ++A+ +
Sbjct: 418 LALTNKGEVYSWGGGQLGQLGHGDFLRQSLPIKVANLEDNIAQ-ISAGKRHSSALTD--- 473
Query: 135 NDGTISTSRLWVWGQNQ 151
DG +L+ WG N+
Sbjct: 474 -DG-----KLFTWGSNE 484
>gi|118397447|ref|XP_001031056.1| RCC1-like domain protein 3, HECT domain [Tetrahymena thermophila]
gi|89285378|gb|EAR83393.1| RCC1-like domain protein 3, HECT domain [Tetrahymena thermophila
SB210]
Length = 1146
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 187/424 (44%), Gaps = 59/424 (13%)
Query: 15 DNIPAKSAIYVWGYNHSGQTGR-----KGRERQLRIPKQLPPELFGCPAGANSRWLDIAC 69
D+ +K + + Y+H Q + K ++ L+ + L P +N +
Sbjct: 478 DSDLSKDELLLGSYDHEDQLFQSQGDDKLKQSHLKDERNLSPNNISSMKSSNVNVQNEGQ 537
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLGDGTEEG--RKHPEKVKQLQSEFVKSISCGAHCTA 127
G+ + F WG NE G+L G ++ PE K L ++K IS + +A
Sbjct: 538 GNSIKCYI------FAWGKNESGELSFGNQKQPFYNKPENPKNLDRIYIKQISTSQNHSA 591
Query: 128 AIAEPREN-------DGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVV 180
I+ E G + L + N+ P +F G + QV+CG H +
Sbjct: 592 CISANGELYVCGSALHGKLGLEELTMANINKFQMIP-IFKG-----IKVLQVACGDYHTL 645
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK--ITQVSCGEY 238
AL++ + +WG + ++G+ G P +L K + QV CG+Y
Sbjct: 646 ALTDTDQVYSWGGTLHKKVGQR---SGKPAP------------IQQLNKKGVIQVDCGDY 690
Query: 239 HSAAVSENGEVYTWGLG----SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVH 294
HSAA+++NG++YTWG G + GQLG ++ + P ++ +G I V+CG H
Sbjct: 691 HSAAITQNGDIYTWGGGGQDYNKGQLGLGHVKDIEN---PEKLKFFEGKKIVKVSCGQFH 747
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRS---FSLIPNESDTYFRNIPILVVPNGVQLVA 351
+ ALTS+ L+ WG + G+LG + + N+ + + NI + N +Q +
Sbjct: 748 TMALTSENELFGWGAGEFGELGTSKHEYTPIRVKVNFNQYNILYENI---LFENSIQNIK 804
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV--GEVRKLAAGGGHSA 409
CG HTL+ +G I+ GY GQ S V W + ++ K+AAG HS
Sbjct: 805 CGGHHTLLLTNNGYIYSSGYGRQGQLGLRNSENQCEFQLV-WTLTKKKIIKIAAGWNHSL 863
Query: 410 VLAD 413
L+D
Sbjct: 864 ALSD 867
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 109/429 (25%), Positives = 192/429 (44%), Gaps = 73/429 (17%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL-DIACGHEHTAAVA 78
K I+ WG N SG+ G ++Q P PE P + ++ I+ H+A ++
Sbjct: 542 KCYIFAWGKNESGELSF-GNQKQ---PFYNKPE---NPKNLDRIYIKQISTSQNHSACIS 594
Query: 79 SDGTLFTWGANEFGQLG--DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
++G L+ G+ G+LG + T + + + V ++CG + T A+ +
Sbjct: 595 ANGELYVCGSALHGKLGLEELTMANINKFQMIPIFKGIKVLQVACGDYHTLALTD----- 649
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQ 189
T +++ WG G+ ++ + P I + QV CG H A+++ G +
Sbjct: 650 ----TDQVYSWG---GTLHKKVGQRSGKPAPIQQLNKKGVIQVDCGDYHSAAITQNGDIY 702
Query: 190 AWG-----YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
WG YN+ GQLG G + ++ P +K + E +KI +VSCG++H+ A++
Sbjct: 703 TWGGGGQDYNK-GQLGLG-HVKDIENPEKLKFF--------EGKKIVKVSCGQFHTMALT 752
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV--------VALDGIF----IKDVACGG 292
E++ WG G G+LG + E P RV + + I I+++ CGG
Sbjct: 753 SENELFGWGAGEFGELG-----TSKHEYTPIRVKVNFNQYNILYENILFENSIQNIKCGG 807
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVAC 352
H+ LT+ G +Y+ G + GQLGL +E+ F+ + L ++ +A
Sbjct: 808 HHTLLLTNNGYIYSSGYGRQGQLGLR---------NSENQCEFQLVWTLTKKKIIK-IAA 857
Query: 353 GHSHTLVYMRDGRIHGWGYNSYGQ-AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AV 410
G +H+L I G+ + GQ ++ + + V ++AGG HS AV
Sbjct: 858 GWNHSLALSDQNDIFACGHGARGQLGLGDEESRTIFTHVVSLGGKNTATISAGGDHSWAV 917
Query: 411 LADACSLKE 419
L +K+
Sbjct: 918 LDQNFPVKQ 926
>gi|261329865|emb|CBH12848.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 640
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 116/389 (29%), Positives = 175/389 (44%), Gaps = 64/389 (16%)
Query: 9 ETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIA 68
E RP+ + ++ WG G+ G + R P + FG +D+A
Sbjct: 147 EPERPM----RRQLLFSWGSGSCGELGTQ-RFEDCNTPTFVQITPFGV------HVVDVA 195
Query: 69 CGHEHTAAVASDGTLFTWGANEFGQLGDG-TEEGRKHPE------KVKQLQSEFVKSISC 121
G ++ +ASDG ++T+G ++GQLG G T E +HPE V Q S F + +
Sbjct: 196 LGASYSCVLASDGNVYTFGNGDWGQLGLGHTPEVEQHPEDTTTVVTVPQRISMFEREPAV 255
Query: 122 GAHCTAAIAEPRENDGTISTSRLWVWGQN---QGSNFPRLFWGAFT----PNTI------ 168
A A D ++ WG N Q PR F + P +
Sbjct: 256 HVAAGYAFAVALTAD-----HHVYFWGNNNHGQSGLGPRSFHCSLRKVEEPTLVTTLEGK 310
Query: 169 -ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDE---- 223
I Q+SCGS +AL G L +WG + LG I G + +E
Sbjct: 311 HIEQLSCGSFFTLALGTDGTLYSWGLLDCLGLGNEAEVRASVTDISIIGKSLSAEERTVV 370
Query: 224 -------APELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK--ELLP 274
P K+ ++ G++HS A++ GE++TWG+G G+LGH GD + P
Sbjct: 371 LEPQVVRVPTEHKLVRIHAGQWHSGAINAAGELFTWGVGYQGRLGH-----GDNGPVMRP 425
Query: 275 RRVV-ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDT 333
++VV AL G + DVACG H+ ALT +GA+Y WG + +GQ G P T + + +
Sbjct: 426 KKVVGALTGRHVVDVACGSFHTVALTDRGAVYCWGDNTSGQCGARPTTDTIT-------S 478
Query: 334 YFRNIPILVVPNGV-QLVACGHSHTLVYM 361
+R + + V GV + +ACG HT+V M
Sbjct: 479 PYRVVNLEFVAGGVARAIACGRQHTVVVM 507
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 106/258 (41%), Gaps = 45/258 (17%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG N+ GQ+G R + K P L G + L +CG T A
Sbjct: 267 LTADHHVYFWGNNNHGQSGLGPRSFHCSLRKVEEPTLVTTLEGKHIEQL--SCGSFFTLA 324
Query: 77 VASDGTLFTWGANEFGQLGDGTE------------EGRKHPEKVKQLQSEFVKSISCGAH 124
+ +DGTL++WG + LG+ E + E+ L+ + V+ + H
Sbjct: 325 LGTDGTLYSWGLLDCLGLGNEAEVRASVTDISIIGKSLSAEERTVVLEPQVVRVPT--EH 382
Query: 125 CTAAIAEPRENDGTISTS-RLWVW----------GQNQGSNFPRLFWGAFTPNTIICQVS 173
I + + G I+ + L+ W G N P+ GA T ++ V+
Sbjct: 383 KLVRIHAGQWHSGAINAAGELFTWGVGYQGRLGHGDNGPVMRPKKVVGALTGRHVV-DVA 441
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP-RVIKGYAKFLDEAPELEKIT- 231
CGS H VAL++ G + WG N GQ G T + + P RV+ LE +
Sbjct: 442 CGSFHTVALTDRGAVYCWGDNTSGQCGARPTTDTITSPYRVVN-----------LEFVAG 490
Query: 232 ----QVSCGEYHSAAVSE 245
++CG H+ V E
Sbjct: 491 GVARAIACGRQHTVVVME 508
>gi|159038147|ref|YP_001537400.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
gi|157916982|gb|ABV98409.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
Length = 555
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 121/401 (30%), Positives = 156/401 (38%), Gaps = 55/401 (13%)
Query: 23 IYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+ WG N GQ G G + IP LPP + IA G EH+ A+ S G
Sbjct: 58 VLAWGDNLFGQLGDGTGADSDTPIPVSLPP---------GTTVTAIAAGDEHSLALTSTG 108
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
T+ WG N FGQLGD T R P V V +I+ G + AI ST
Sbjct: 109 TVLAWGRNRFGQLGDETNTSRSTPVTVSLPPGTTVTAIAAGRSHSLAI---------TST 159
Query: 142 SRLWVWGQN----------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
WG+N SN P P T + ++ G H +A++ G AW
Sbjct: 160 GSALAWGRNFSGQLGDGTTNDSNKPVAV--NLPPGTTVTAIAAGDGHSLAVTSAGTALAW 217
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G N GQLG G T + P + AP +T ++ G HS A++ G
Sbjct: 218 GRNFAGQLGDGTTNDSTT-PVTVS-------VAPG-TTVTDIAAGRVHSLAITSAGTALG 268
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG GQLG + V G VA G HS A+TS G A G +
Sbjct: 269 WGRNGSGQLGDGTTNDSTTP---TTVSPPTGTVFTTVAAGEDHSLAVTSAGTALAAGDNL 325
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGY 371
GQLG G T S + + ++P + +A G H L G WG
Sbjct: 326 YGQLGDGTNTSSNTFV-------TVSLPPSTT---ITAIAVGRFHNLGVTATGAALAWGI 375
Query: 372 NSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
N GQ + +T P VD V +A G GHS LA
Sbjct: 376 NIDGQLGDGTTTNRNTPQAVDLPVST--TVAGGFGHSLALA 414
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 108/292 (36%), Gaps = 44/292 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTA 75
I + + WG N SGQ G + + LPP + IA G H+
Sbjct: 156 ITSTGSALAWGRNFSGQLGDGTTNDSNKPVAVNLPP---------GTTVTAIAAGDGHSL 206
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
AV S GT WG N GQLGDGT P V V I+ G + AI
Sbjct: 207 AVTSAGTALAWGRNFAGQLGDGTTNDSTTPVTVSVAPGTTVTDIAAGRVHSLAITSAGTA 266
Query: 136 DGTISTSRLWVWGQNQGSNF--------PRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
G WG+N + T+ V+ G H +A++ G
Sbjct: 267 LG---------WGRNGSGQLGDGTTNDSTTPTTVSPPTGTVFTTVAAGEDHSLAVTSAGT 317
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA-PELEKITQVSCGEYHSAAVSEN 246
A G N YGQLG G F+ + P IT ++ G +H+ V+
Sbjct: 318 ALAAGDNLYGQLGDGTNTS----------SNTFVTVSLPPSTTITAIAVGRFHNLGVTAT 367
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
G WG+ GQLG + + + P+ A+D VA G HS AL
Sbjct: 368 GAALAWGINIDGQLGDGTTTNRNT---PQ---AVDLPVSTTVAGGFGHSLAL 413
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 58/147 (39%), Gaps = 13/147 (8%)
Query: 272 LLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNES 331
LL V I + A S + + AWG + GQLG G +S
Sbjct: 26 LLTMAVAVTQAIAVSPTAAQNTLSPSTVGSDTVLAWGDNLFGQLGDGTGA--------DS 77
Query: 332 DTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSP 390
DT IP+ + P V +A G H+L G + WG N +GQ +E +T P
Sbjct: 78 DTP---IPVSLPPGTTVTAIAAGDEHSLALTSTGTVLAWGRNRFGQLGDETNTSRSTPVT 134
Query: 391 VDWCVG-EVRKLAAGGGHSAVLADACS 416
V G V +AAG HS + S
Sbjct: 135 VSLPPGTTVTAIAAGRSHSLAITSTGS 161
>gi|74002225|ref|XP_851549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Canis lupus
familiaris]
Length = 1015
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 86/237 (36%), Positives = 120/237 (50%), Gaps = 17/237 (7%)
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
VSCG H +A+ G + AWG GQLG G E P IK KI
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLNDI--------KIK 131
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
QVSCG YHS A+SE G+V++WG S GQLG + + P+RV +LDGI + VA G
Sbjct: 132 QVSCGHYHSLALSEGGQVFSWGSNSDGQLGLG--KKFPSQASPQRVRSLDGIPLAQVAAG 189
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVA 351
G HS AL+ G + WG + AGQL L S S + +N+ GV ++
Sbjct: 190 GAHSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNL-------GVIYIS 242
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
CG+ HT+V ++G++ +G N+YGQ + + P V+ G V ++ G H+
Sbjct: 243 CGYEHTVVLTQNGKVFTFGDNTYGQLGHSPTAEKSGPQLVEGIDGLVSQIDCGSYHT 299
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 152/359 (42%), Gaps = 55/359 (15%)
Query: 68 ACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTA 127
A G H+ + S+G + + G N GQLG ++++ L++ V +SCG +
Sbjct: 29 ASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKRIRALETLHVDLVSCGKEHSL 88
Query: 128 AIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAF-----------TPNTI-ICQVSCG 175
A+ R++ WG +L G F T N I I QVSCG
Sbjct: 89 AVCH---------KGRVFAWGAGSEG---QLGTGEFKETNLIPMKIKTLNDIKIKQVSCG 136
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
H +ALSE G + +WG N GQLG G P+ ++ LD P + QV+
Sbjct: 137 HYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRS----LDGIP----LAQVAA 188
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
G HS A+S +G + WG + GQL + P + AL + + ++CG H+
Sbjct: 189 GGAHSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISCGYEHT 248
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLVACG 353
LT G ++ +G + GQLG P ++ P LV + V + CG
Sbjct: 249 VVLTQNGKVFTFGDNTYGQLGHSPTAE-------------KSGPQLVEGIDGLVSQIDCG 295
Query: 354 HSHTLVYM-RDGRIHGWGYN-------SYGQAANEKSTYAWYPSPVDWCVGEVRKLAAG 404
HTL Y+ G++ +G ++ +A E + S D +V+ + AG
Sbjct: 296 SYHTLAYVYTTGKVVSFGREPTCKSSPTHPEALTENVDFTCLISADDLVDFQVKHIFAG 354
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 124/259 (47%), Gaps = 42/259 (16%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCGAHC 125
++CG EH+ AV G +F WGA GQLG G +E P K+K L +K +SCG +
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSCGHYH 139
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQV 172
+ A++E +++ WG N G FP +P + + QV
Sbjct: 140 SLALSE---------GGQVFSWGSNSDGQLGLGKKFP----SQASPQRVRSLDGIPLAQV 186
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
+ G H ALS G WG N GQL + + G + Y + A + +
Sbjct: 187 AAGGAHSFALSLSGTSFGWGRNNAGQL--ALHKNNVSG----QSYKPYSISALKNLGVIY 240
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGH--CSLQSGDKELLPRRVVALDGIFIKDVAC 290
+SCG H+ +++NG+V+T+G + GQLGH + +SG P+ V +DG+ + + C
Sbjct: 241 ISCGYEHTVVLTQNGKVFTFGDNTYGQLGHSPTAEKSG-----PQLVEGIDGL-VSQIDC 294
Query: 291 GGVHSCA-LTSKGALYAWG 308
G H+ A + + G + ++G
Sbjct: 295 GSYHTLAYVYTTGKVVSFG 313
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 96/190 (50%), Gaps = 22/190 (11%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH----CSLQSGDKELLPRRVVALDGIF 284
++ Q + GE HS + NG+V++ G GQLG CS Q +R+ AL+ +
Sbjct: 24 ELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQL-------KRIRALETLH 76
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP 344
+ V+CG HS A+ KG ++AWG GQLG G + + +LIP + T +I I
Sbjct: 77 VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTG-EFKETNLIPMKIKT-LNDIKI---- 130
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ-AANEKSTYAWYPSPVDWCVG-EVRKLA 402
+ V+CGH H+L G++ WG NS GQ +K P V G + ++A
Sbjct: 131 ---KQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQVA 187
Query: 403 AGGGHSAVLA 412
AGG HS L+
Sbjct: 188 AGGAHSFALS 197
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 114/243 (46%), Gaps = 31/243 (12%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG GQ G + IP ++ + + ++CGH H+ A++
Sbjct: 93 KGRVFAWGAGSEGQLGTGEFKETNLIPMKIK-------TLNDIKIKQVSCGHYHSLALSE 145
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP------ 132
G +F+WG+N GQLG G + + P++V+ L + ++ G + A++
Sbjct: 146 GGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGW 205
Query: 133 -RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
R N G ++ + V GQ+ + + + N + +SCG H V L++ G + +
Sbjct: 206 GRNNAGQLALHKNNVSGQSY-----KPYSISALKNLGVIYISCGYEHTVVLTQNGKVFTF 260
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEVY 250
G N YGQLG T E GP++++G ++Q+ CG YH+ A V G+V
Sbjct: 261 GDNTYGQLGHSPTAEK-SGPQLVEGIDGL---------VSQIDCGSYHTLAYVYTTGKVV 310
Query: 251 TWG 253
++G
Sbjct: 311 SFG 313
>gi|322785446|gb|EFZ12117.1| hypothetical protein SINV_05294 [Solenopsis invicta]
Length = 585
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 164/355 (46%), Gaps = 41/355 (11%)
Query: 33 QTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGH----EHTAAVASDGTLFTWGA 88
QT R + + + K + L WL + G V D ++ G+
Sbjct: 37 QTARTSKIKIKDVLKSIYIVLILVFGTVLVLWLILHLGTGNLGNEALIVTRDKMVYALGS 96
Query: 89 NEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWG 148
N G LG G +P+KV L + +K + G+ +A +E + + +++ WG
Sbjct: 97 NIAGCLGTGDAHSTLYPKKVDALCEKDIKMFAYGSG-PHVLALTKEGEVRLYLRKVYSWG 155
Query: 149 QN------QGSNFPRLFWGAFTPNTI--ICQVSCGSVHVVALSECGLLQAWGYNEYGQLG 200
N G+ L+ I I ++CGS H VAL+E G + AWG N GQ G
Sbjct: 156 HNGYCELGNGTCNQGLYPTQVNSLGIKRIVDIACGSHHSVALNEDGEIYAWGQNNCGQAG 215
Query: 201 RGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQL 260
IT +G + ++ +K+ Q++CG+ + A+ ENGEVY WG VGQL
Sbjct: 216 SSITTN--------QGVPRQVNSNLAGKKVAQIACGQTSTVALLENGEVYGWGYNGVGQL 267
Query: 261 GHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQ 320
G + + ++ P R+ L G I VACG VH+ ALT +G LY WGG+ GQLG+ +
Sbjct: 268 G---IGNYVNQMTPCRIGTLLGTVIVKVACGYVHTLALTDEGQLYVWGGNSYGQLGISNK 324
Query: 321 TRSFSLIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRD-GRIHGWGY 371
T + + P+LV + + A ++HT V + + GR++ WG+
Sbjct: 325 TNACN-------------PVLVKHEMGRVSDIAALHYNHTSVAVGEGGRVYMWGH 366
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 118/234 (50%), Gaps = 30/234 (12%)
Query: 178 HVVALSECGLLQ-------AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
HV+AL++ G ++ +WG+N Y +LG G +GL +V + +++I
Sbjct: 134 HVLALTKEGEVRLYLRKVYSWGHNGYCELGNGTCNQGLYPTQV---------NSLGIKRI 184
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVA 289
++CG +HS A++E+GE+Y WG + GQ G S+ + +PR+V + L G + +A
Sbjct: 185 VDIACGSHHSVALNEDGEIYAWGQNNCGQAGS-SITTNQG--VPRQVNSNLAGKKVAQIA 241
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
CG + AL G +Y WG + GQLG+G + P T + + V
Sbjct: 242 CGQTSTVALLENGEVYGWGYNGVGQLGIGNYVNQMT--PCRIGTLLGTVIVKV------- 292
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 403
ACG+ HTL +G+++ WG NSYGQ T A P V +G V +AA
Sbjct: 293 -ACGYVHTLALTDEGQLYVWGGNSYGQLGISNKTNACNPVLVKHEMGRVSDIAA 345
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 117/453 (25%), Positives = 179/453 (39%), Gaps = 74/453 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG+N + G G Q P Q+ + R +DIACG H+ A+ DG
Sbjct: 151 VYSWGHNGYCELGN-GTCNQGLYPTQVN-------SLGIKRIVDIACGSHHSVALNEDGE 202
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
++ WG N GQ G + P +V L + V I+CG T A+ E E G
Sbjct: 203 IYAWGQNNCGQAGSSITTNQGVPRQVNSNLAGKKVAQIACGQTSTVALLENGEVYG---- 258
Query: 142 SRLWVWGQN-QGSNFPRLFWGAFTP-------NTIICQVSCGSVHVVALSECGLLQAWGY 193
WG N G + TP T+I +V+CG VH +AL++ G L WG
Sbjct: 259 -----WGYNGVGQLGIGNYVNQMTPCRIGTLLGTVIVKVACGYVHTLALTDEGQLYVWGG 313
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH--SAAVSENGEVYT 251
N YGQLG P ++K E+ +++ ++ Y+ S AV E G VY
Sbjct: 314 NSYGQLGISNKTNACN-PVLVK---------HEMGRVSDIAALHYNHTSVAVGEGGRVYM 363
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
W GHC QS D + AC G S + LYA S
Sbjct: 364 W--------GHCRGQSITTPTATPFSNVHDAL-----ACWGSPS-VMHKPLILYADEDSG 409
Query: 312 AGQ-LGLG---PQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
Q LG P T ++ + Y V + + C Y R+ H
Sbjct: 410 ILQCLGAAFDDPATSDLTIQVDGECIY--------VHKAILKIRCS------YFRNMFQH 455
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAV-LADAC---SLKELCEF 423
W ++ +++ +Y Y + + + +V L + LA+A +LK+ C
Sbjct: 456 NWTESNQSVIEHDQFSYVVYKAFLKYLYTDVIDLPVEKALELLDLANAYCENNLKKHCIR 515
Query: 424 RLAESVTLSNASEIEDVASRTGSEALARLCERL 456
+ + +T+SN + + +A +E L C +
Sbjct: 516 MIKQGITVSNVAYLYSIAIEYSAEELEEFCFKF 548
>gi|291407336|ref|XP_002719873.1| PREDICTED: retinitis pigmentosa GTPase regulator-like [Oryctolagus
cuniculus]
Length = 882
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 115/363 (31%), Positives = 172/363 (47%), Gaps = 54/363 (14%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++CG EHTA V + L+ +G+N +GQLG G++ P VK L+ E VK ++CG + T
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKTTINKPTCVKALKPEKVKYVACGRNHT 99
Query: 127 AAIAEP-------RENDGTISTSRLWVWGQNQGSN--FPRLFWGAFTPNTIICQVSCGSV 177
E NDG + G +G N +P F FT I Q+S GS
Sbjct: 100 LVSTEEGNVYATGGNNDGQLG------LGDTEGRNTFYPISF---FTSQHKIKQLSAGSN 150
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
AL+E G L WG N GQ+G +V G + I+ +SCG
Sbjct: 151 TSAALTENGELFMWGDNSEGQIGLKNVTNVCVPHQVTIG-----------KPISWISCGY 199
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL-----PRRVVALDGIFIKDVACGG 292
YHSA V+ +GE+YT+G G+LG +ELL P+ V + I+ VACGG
Sbjct: 200 YHSAFVTMDGELYTFGECENGKLGL------PEELLINHKTPQLVTRIPEKVIQ-VACGG 252
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVAC 352
H+ LT + +Y +G Q GQLGLG T F ++ Y ++ + + ++C
Sbjct: 253 GHTVVLT-ETIVYTFGLGQFGQLGLG--TFIFETSEPKAIEYIKD-------HKISSISC 302
Query: 353 GHSHTLVYMRDGRIHGWGYNSYGQ--AANEKSTYAWYPSP-VDWCVGEVRKLAAGGGHSA 409
G +HT + GR++ +G YG+ E T + P+ D+ ++ +A GG H
Sbjct: 303 GENHTALITELGRMYTFGDGRYGKLGLGLENFTNQFVPTLCCDFLRFMIQLVACGGCHMV 362
Query: 410 VLA 412
+ A
Sbjct: 363 IFA 365
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 123/285 (43%), Gaps = 51/285 (17%)
Query: 144 LWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
++ +G+ + N P FW N + +SCG H ++ L +G N +GQLG G
Sbjct: 14 VFTFGKTKFAENIPSKFWFK---NDVPTYLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLG 70
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
+ + P +K A + EK+ V+CG H+ +E G VY G + GQLG
Sbjct: 71 -SKTTINKPTCVK--------ALKPEKVKYVACGRNHTLVSTEEGNVYATGGNNDGQLG- 120
Query: 263 CSLQSGDKELLPRRVVALDGIF-----IKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GD E R F IK ++ G S ALT G L+ WG + GQ+GL
Sbjct: 121 ----LGDTE--GRNTFYPISFFTSQHKIKQLSAGSNTSAALTENGELFMWGDNSEGQIGL 174
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQL------VACGHSHTLVYMRDGRIHGWGY 371
+N+ + VP+ V + ++CG+ H+ DG ++ +G
Sbjct: 175 ------------------KNVTNVCVPHQVTIGKPISWISCGYYHSAFVTMDGELYTFGE 216
Query: 372 NSYGQAANEKSTYAWYPSP--VDWCVGEVRKLAAGGGHSAVLADA 414
G+ + + +P V +V ++A GGGH+ VL +
Sbjct: 217 CENGKLGLPEELLINHKTPQLVTRIPEKVIQVACGGGHTVVLTET 261
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 90/195 (46%), Gaps = 38/195 (19%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+++WG N GQ G K + +P Q+ G P W I+CG+ H+A V DG
Sbjct: 161 LFMWGDNSEGQIGLKNV-TNVCVPHQV---TIGKPIS----W--ISCGYYHSAFVTMDGE 210
Query: 83 LFTWGANEFGQLGDGTEE--GRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
L+T+G E G+LG E K P+ V ++ + ++ ++CG T + E TI
Sbjct: 211 LYTFGECENGKLGLPEELLINHKTPQLVTRIPEKVIQ-VACGGGHTVVLTE------TI- 262
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFT-----PNTI-------ICQVSCGSVHVVALSECGLL 188
++ +G Q F +L G F P I I +SCG H ++E G +
Sbjct: 263 ---VYTFGLGQ---FGQLGLGTFIFETSEPKAIEYIKDHKISSISCGENHTALITELGRM 316
Query: 189 QAWGYNEYGQLGRGI 203
+G YG+LG G+
Sbjct: 317 YTFGDGRYGKLGLGL 331
>gi|91202109|emb|CAJ75169.1| hypothetical protein kuste4407 [Candidatus Kuenenia
stuttgartiensis]
Length = 1590
Score = 127 bits (320), Expect = 1e-26, Method: Composition-based stats.
Identities = 109/381 (28%), Positives = 166/381 (43%), Gaps = 76/381 (19%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
IA G H+ A+ S+GT++ WG N GQLGD T + R P +V + + + +I GA +
Sbjct: 567 IAAGARHSLALKSNGTVWAWGNNGDGQLGDETTKNRTIPAQVSNVNA--ITTIDGGASHS 624
Query: 127 AAIAEPRENDGTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVV 180
A+ ++DGT+ WVWG N G+N + + + I ++CG H +
Sbjct: 625 LAL----KSDGTV-----WVWGANWDGQLGDGTNTRKTTPVQISGLSDIISIACGMYHSI 675
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
AL G + A+G N+YGQLG G Y + L + ++ G+YH
Sbjct: 676 ALKSDGTVWAFGRNDYGQLGDGTNV-----------YRNKPVQVSGLSDVIAIAGGDYHC 724
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
A+ +G V+ WG GQLG + + + P +V ++ + +A G VHS AL S
Sbjct: 725 LALKSDGIVWAWGNNESGQLGDGTTTNRNT---PVQVSSISN--VAAIARGWVHSLALKS 779
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLI--------------------------------- 327
++AWG + +GQLG G T + +
Sbjct: 780 DETVWAWGSNGSGQLGDGTTTNRTTPVNITNINNIIAIAGGGGYTIALKSDGTGWTCGEY 839
Query: 328 -----PNESDTY----FRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
N +Y +R P V N V VA G H +V +DG + WG N YGQ
Sbjct: 840 GWDYSENNGSSYWGYSYRTTPDQVAGINDVVAVAGGWQHIVVLKQDGTVWTWGVNWYGQL 899
Query: 378 ANEKSTYAWYPSPVDWCVGEV 398
+ +T P VD +GE+
Sbjct: 900 GDGTTTDRDTPVQVDINLGEM 920
Score = 95.9 bits (237), Expect = 4e-17, Method: Composition-based stats.
Identities = 101/356 (28%), Positives = 139/356 (39%), Gaps = 58/356 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + ++VWG N GQ G R K P ++ G S + IACG H+ A
Sbjct: 627 LKSDGTVWVWGANWDGQLGDGTNTR-----KTTPVQISGL-----SDIISIACGMYHSIA 676
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ SDGT++ +G N++GQLGDGT R P +V L S+ + HC A ++D
Sbjct: 677 LKSDGTVWAFGRNDYGQLGDGTNVYRNKPVQVSGL-SDVIAIAGGDYHCLAL-----KSD 730
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSC---------GSVHVVALSECGL 187
G + W WG N+ +L G T QVS G VH +AL
Sbjct: 731 GIV-----WAWGNNESG---QLGDGTTTNRNTPVQVSSISNVAAIARGWVHSLALKSDET 782
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI------TQVSCGEYHSA 241
+ AWG N GQLG G T + I T +CGEY
Sbjct: 783 VWAWGSNGSGQLGDGTTTNRTTPVNITNINNIIAIAGGGGYTIALKSDGTGWTCGEYGWD 842
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
NG Y WG P +V ++ + VA G H L
Sbjct: 843 YSENNGSSY-WGYSY--------------RTTPDQVAGINDVVA--VAGGWQHIVVLKQD 885
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT 357
G ++ WG + GQLG G T + P + D +P P G + G S+T
Sbjct: 886 GTVWTWGVNWYGQLGDGTTTDRDT--PVQVDINLGEMPDTFPPEGSISINSGVSYT 939
Score = 88.6 bits (218), Expect = 6e-15, Method: Composition-based stats.
Identities = 75/246 (30%), Positives = 107/246 (43%), Gaps = 31/246 (12%)
Query: 167 TIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPE 226
T+ +++ G+ H +AL G + AWG N GQLG T R I +
Sbjct: 562 TVTPKIAAGARHSLALKSNGTVWAWGNNGDGQLGDETTKN-----RTIPA------QVSN 610
Query: 227 LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
+ IT + G HS A+ +G V+ WG GQLG + ++ P ++ L I
Sbjct: 611 VNAITTIDGGASHSLALKSDGTVWVWGANWDGQLGD---GTNTRKTTPVQISGLSDII-- 665
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-N 345
+ACG HS AL S G ++A+G + GQLG G +RN P+ V +
Sbjct: 666 SIACGMYHSIALKSDGTVWAFGRNDYGQLGDGTNV-------------YRNKPVQVSGLS 712
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGG 405
V +A G H L DG + WG N GQ + +T P V + V +A G
Sbjct: 713 DVIAIAGGDYHCLALKSDGIVWAWGNNESGQLGDGTTTNRNTPVQVS-SISNVAAIARGW 771
Query: 406 GHSAVL 411
HS L
Sbjct: 772 VHSLAL 777
>gi|158286478|ref|XP_001688080.1| AGAP006994-PB [Anopheles gambiae str. PEST]
gi|157020487|gb|EDO64729.1| AGAP006994-PB [Anopheles gambiae str. PEST]
Length = 1060
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 168/374 (44%), Gaps = 58/374 (15%)
Query: 22 AIYVWGYNHSGQTGRKG-RERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
AIY WG G+ G G E Q+ +P+++ + + CG HT + +
Sbjct: 2 AIYCWGNTAHGELGLGGIEEEQVMVPRKMD-------WSQADEVVRVECGTSHTLFLTKE 54
Query: 81 GTLFTWGANEFGQLG---DGTEEGRKHPEKVKQLQS---EFVKSISCGAHCTAAIAEPRE 134
G ++ G N+ GQLG D R + K+L S + ISCG + A+
Sbjct: 55 GKMYACGNNDHGQLGHDLDTLPNKRPRMSRFKRLTSLENYIITCISCGTAHSLALT---- 110
Query: 135 NDGTISTSRLWVWGQNQGSNF-----------PRLFWGAFTPNTIICQVSCGSVHVVALS 183
+ +++ WG N PR+ + + Q++ G H +AL+
Sbjct: 111 -----NWGQVFSWGSNAVGQLGHDAENGRQPTPRMIKAIGAKHVV--QIASGQYHCLALT 163
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
G L AWG N YGQLG G T E + P +I+ A I ++CG HS AV
Sbjct: 164 NNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGV--------PIAFIACGGNHSFAV 215
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
S++G ++ WG + GQLG L S P ++ L + ++ ++CG S LT++G
Sbjct: 216 SKSGAIFGWGKNTFGQLGLNDLNS---RCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGG 272
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-R 362
++ G GQLG G + S ++P + ++ + + +ACG HTL ++
Sbjct: 273 VFTCGAGTFGQLGHG--SCSNEIVPRKV--------FELMGSKITQIACGRRHTLAFVPS 322
Query: 363 DGRIHGWGYNSYGQ 376
G+I+G+G GQ
Sbjct: 323 RGKIYGFGLGGVGQ 336
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 131/267 (49%), Gaps = 40/267 (14%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRK-HPEKVKQLQSEFVKSISCGA-H 124
I+CG H+ A+ + G +F+WG+N GQLG E GR+ P +K + ++ V I+ G H
Sbjct: 99 ISCGTAHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYH 158
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT-----PNTI-------ICQV 172
C A N+G L+ WG N ++ +L G + P I I +
Sbjct: 159 CLALT-----NNG-----ELYAWGSN---SYGQLGIGTTSEKVPMPTLIQSLAGVPIAFI 205
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
+CG H A+S+ G + WG N +GQLG + Y L L +
Sbjct: 206 ACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNS--------RCYPTQLRTLRSL-GVRY 256
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
+SCG+ S ++ G V+T G G+ GQLGH S + E++PR+V L G I +ACG
Sbjct: 257 ISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSCSN---EIVPRKVFELMGSKITQIACGR 313
Query: 293 VHSCALT-SKGALYAWGGSQAGQLGLG 318
H+ A S+G +Y +G GQLG+G
Sbjct: 314 RHTLAFVPSRGKIYGFGLGGVGQLGIG 340
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 109/252 (43%), Gaps = 41/252 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G + P+ + A + IA G H A+ ++G
Sbjct: 115 VFSWGSNAVGQLGHDAENGRQPTPRMIK-------AIGAKHVVQIASGQYHCLALTNNGE 167
Query: 83 LFTWGANEFGQLGDG-TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
L+ WG+N +GQLG G T E P ++ L + I+CG + + A+++ +
Sbjct: 168 LYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSK---------S 218
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPNTIICQ-----------VSCGSVHVVALSECGLLQA 190
++ WG+N F +L Q +SCG V L+ G +
Sbjct: 219 GAIFGWGKN---TFGQLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFT 275
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEV 249
G +GQLG G +C PR + KITQ++CG H+ A V G++
Sbjct: 276 CGAGTFGQLGHG-SCSNEIVPRKVFELMG--------SKITQIACGRRHTLAFVPSRGKI 326
Query: 250 YTWGLGSVGQLG 261
Y +GLG VGQLG
Sbjct: 327 YGFGLGGVGQLG 338
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 92/200 (46%), Gaps = 20/200 (10%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG N GQ G ++ +P L L G P IACG H+ AV+ G
Sbjct: 168 LYAWGSNSYGQLGIGTTSEKVPMPT-LIQSLAGVPIAF------IACGGNHSFAVSKSGA 220
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F WG N FGQLG R +P +++ L+S V+ ISCG + + N+G + T
Sbjct: 221 IFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLT----NEGGVFTC 276
Query: 143 RLWVWGQ-NQGS----NFPRLFWGAFTPNTIICQVSCGSVHVVALSEC-GLLQAWGYNEY 196
+GQ GS PR + + I Q++CG H +A G + +G
Sbjct: 277 GAGTFGQLGHGSCSNEIVPRKVFELM--GSKITQIACGRRHTLAFVPSRGKIYGFGLGGV 334
Query: 197 GQLGRGITCEGLQGPRVIKG 216
GQLG G+ P++++G
Sbjct: 335 GQLGIGMVGNH-STPQIVRG 353
>gi|195014693|ref|XP_001984062.1| GH15214 [Drosophila grimshawi]
gi|193897544|gb|EDV96410.1| GH15214 [Drosophila grimshawi]
Length = 1052
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 174/387 (44%), Gaps = 62/387 (16%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG GQ G G E Q+ P ++P + P A ++ IACGH HT + + G
Sbjct: 3 LYCWGNASHGQLGLGGIEDEQILTPSKMPWQ----PDSAVNQ---IACGHRHTLFLTASG 55
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
++ G+N++ QLG E K P ++ +L + I+CG+ + A+ E
Sbjct: 56 KVYACGSNDYAQLGH--ELSSKRPLQIPELVDCVITQIACGSRHSMALTE---------W 104
Query: 142 SRLWVWGQNQ-----------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
++ WG N+ P+ A T++ Q++CG+ H +AL+ CG L A
Sbjct: 105 GQVLSWGDNECGQLGHASDQDVVQLPKTV-RALVSKTVV-QIACGNNHSLALTCCGELYA 162
Query: 191 WGYNEYGQLGRGITCEGLQ--GPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG N YGQLG E Q P ++ + ++CG HS +S++
Sbjct: 163 WGSNIYGQLGVKTPSELGQCNAPMLLTTLLGI--------PVRAIACGGNHSFLISKSSA 214
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
V+ WG + GQLG L P ++ L + ++ VACG S LT++G ++ G
Sbjct: 215 VFGWGRNNCGQLG---LNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCG 271
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYM-RDG 364
GQLG G NE +P +V+ + + VACG+ HTL + G
Sbjct: 272 AGAYGQLGHG-------FCGNEM------LPRMVMELMGSTISQVACGNRHTLAMVPARG 318
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPV 391
RI+G+G S GQ + P V
Sbjct: 319 RIYGFGLGSSGQLGTRNTKSLNLPQMV 345
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 168/397 (42%), Gaps = 74/397 (18%)
Query: 17 IPAKSAIYVWGYNHSGQTGRK-GRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTA 75
+ A +Y G N Q G + +R L+IP EL C IACG H+
Sbjct: 51 LTASGKVYACGSNDYAQLGHELSSKRPLQIP-----ELVDCVIT------QIACGSRHSM 99
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEG-RKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
A+ G + +WG NE GQLG +++ + P+ V+ L S+ V I+CG + + A+
Sbjct: 100 ALTEWGQVLSWGDNECGQLGHASDQDVVQLPKTVRALVSKTVVQIACGNNHSLALT---- 155
Query: 135 NDGTISTSRLWVWGQN----QGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALS 183
L+ WG N G P P + + ++CG H +S
Sbjct: 156 -----CCGELYAWGSNIYGQLGVKTPSELGQCNAPMLLTTLLGIPVRAIACGGNHSFLIS 210
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ + WG N GQLG + Y L L + V+CG+ S +
Sbjct: 211 KSSAVFGWGRNNCGQLGL--------NDETNRAYPTQLKTLRTL-GVRFVACGDEFSVFL 261
Query: 244 SENGEVYTWGLGSVGQLGH--CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-S 300
+ G V+T G G+ GQLGH C E+LPR V+ L G I VACG H+ A+ +
Sbjct: 262 TNEGGVFTCGAGAYGQLGHGFCG-----NEMLPRMVMELMGSTISQVACGNRHTLAMVPA 316
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV-----PNGVQLVACGHS 355
+G +Y +G +GQLG TR +T N+P +V+ P+G L+ +
Sbjct: 317 RGRIYGFGLGSSGQLG----TR---------NTKSLNLPQMVIGPWVSPSGSALLQSSDA 363
Query: 356 HTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVD 392
V +R +I G Q+ S Y PVD
Sbjct: 364 QIAVVIR--QIFSGG----DQSIVTTSLYVDKKPPVD 394
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 110/243 (45%), Gaps = 43/243 (17%)
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
L WG +GQLG G G++ +++ + P+ + Q++CG H+ ++ +G
Sbjct: 3 LYCWGNASHGQLGLG----GIEDEQILTPSK--MPWQPD-SAVNQIACGHRHTLFLTASG 55
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
+VY G QLGH L S P ++ L I +ACG HS ALT G + +W
Sbjct: 56 KVYACGSNDYAQLGH-ELSSKR----PLQIPELVDCVITQIACGSRHSMALTEWGQVLSW 110
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRDG 364
G ++ GQLG + SD +P V V V +ACG++H+L G
Sbjct: 111 GDNECGQLG------------HASDQDVVQLPKTVRALVSKTVVQIACGNNHSLALTCCG 158
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE----------VRKLAAGGGHSAVLADA 414
++ WG N YGQ + PS + C VR +A GG HS +++ +
Sbjct: 159 ELYAWGSNIYGQLGVKT------PSELGQCNAPMLLTTLLGIPVRAIACGGNHSFLISKS 212
Query: 415 CSL 417
++
Sbjct: 213 SAV 215
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 70/167 (41%), Gaps = 15/167 (8%)
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
E+Y WG S GQLG ++ ++ L P ++ + +ACG H+ LT+ G +YA
Sbjct: 2 ELYCWGNASHGQLGLGGIED-EQILTPSKMPWQPDSAVNQIACGHRHTLFLTASGKVYAC 60
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G + QLG ++ IP D I ACG H++ G++
Sbjct: 61 GSNDYAQLGHELSSKRPLQIPELVDCVITQI------------ACGSRHSMALTEWGQVL 108
Query: 368 GWGYNSYGQAAN-EKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
WG N GQ + P V V + V ++A G HS L
Sbjct: 109 SWGDNECGQLGHASDQDVVQLPKTVRALVSKTVVQIACGNNHSLALT 155
>gi|428179449|gb|EKX48320.1| hypothetical protein GUITHDRAFT_162457 [Guillardia theta CCMP2712]
Length = 580
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 124/454 (27%), Positives = 197/454 (43%), Gaps = 49/454 (10%)
Query: 41 RQLRIPKQLPPELFGCPAGANSR--WLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGT 98
++LR K+ P L S + +ACG HT AV DG + +WG GQLG G
Sbjct: 47 KRLRFDKRFPVSLSFTALAHESLNGAIYVACGGHHTVAVTEDGEVVSWGWGNEGQLGSGN 106
Query: 99 EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRL 158
+ P VK L + V ++CG + TA + + + WG+ +
Sbjct: 107 AFDQTVPAVVKALSNHRVCGVACGYYHTAVVTD---------VGLVMCWGKGNSGQLGQG 157
Query: 159 FW-GAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCE---G 207
W + P T+ I Q++CG H +ALS G + +WG GQLG G E
Sbjct: 158 DWTSSLLPRTVSTLYNEKIRQIACGMAHTLALSVNGEIYSWGAGADGQLGVGKHQEETAD 217
Query: 208 LQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQS 267
+ P+ ++ E EK ++CG H A++++ +++WGLG+ G+LG +S
Sbjct: 218 VATPQKVR--------VDEEEKFEFIACGSRHCMAITDDCRLFSWGLGADGRLGLGDSES 269
Query: 268 GDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLI 327
+ RR +++ + I VA GG H+ L+ G ++ G GQLG G +L
Sbjct: 270 RFSPTVVRR--SIENLRICYVAAGGHHTAVLSDNGEIFTCGRGSYGQLGHGDADPQLTLK 327
Query: 328 PNESDTYFRNIPILVVPNGVQLV--ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYA 385
+ + + +V +++ ACG +HTLV G + WG GQ + A
Sbjct: 328 KARALRHGCLLLHIVQLRDKKIIKAACGDTHTLVISTAGEVFAWGAAEDGQLGTGGTEGA 387
Query: 386 WYPSPVDWCVGEVRKLAAGGGHSA-----VLADACSLKELCEFRLAESVTLSNASEIEDV 440
P + G V ++ G HSA + A + + EL + S +L A E++
Sbjct: 388 NSPVELTSLRGLVGDVSCGLVHSAAVPMQIFAVSSKIAELEDVIQRLSTSLRTA-EMQVQ 446
Query: 441 ASRTG--------SEALARLCERLREHS-LHGDE 465
A R EA+ L +R H +HG E
Sbjct: 447 AERRSRLVAEHKLQEAMHLLSKRGAVHKVVHGSE 480
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/318 (31%), Positives = 140/318 (44%), Gaps = 51/318 (16%)
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS----------------CGAHC 125
+L WG EFG+LG G + P++++ F S+S CG H
Sbjct: 25 SLQGWG--EFGRLGHGDTLSQLEPKRLR-FDKRFPVSLSFTALAHESLNGAIYVACGGHH 81
Query: 126 TAAIAEPRENDGTISTSRLWVWGQN----QGSNFPRLFWGAFTP--NTIICQVSCGSVHV 179
T A+ E DG + + W WG G+ F + N +C V+CG H
Sbjct: 82 TVAVTE----DGEVVS---WGWGNEGQLGSGNAFDQTVPAVVKALSNHRVCGVACGYYHT 134
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
+++ GL+ WG GQLG+G L PR + EKI Q++CG H
Sbjct: 135 AVVTDVGLVMCWGKGNSGQLGQGDWTSSLL-PRTVSTLYN--------EKIRQIACGMAH 185
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKEL-LPRRVVALDGIFIKDVACGGVHSCAL 298
+ A+S NGE+Y+WG G+ GQLG Q ++ P++V + + +ACG H A+
Sbjct: 186 TLALSVNGEIYSWGAGADGQLGVGKHQEETADVATPQKVRVDEEEKFEFIACGSRHCMAI 245
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 358
T L++WG G+LGLG FS P N+ I VA G HT
Sbjct: 246 TDDCRLFSWGLGADGRLGLGDSESRFS--PTVVRRSIENLRIC-------YVAAGGHHTA 296
Query: 359 VYMRDGRIHGWGYNSYGQ 376
V +G I G SYGQ
Sbjct: 297 VLSDNGEIFTCGRGSYGQ 314
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 114/244 (46%), Gaps = 32/244 (13%)
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAP-------ELEKITQVSCGEYHS 240
LQ WG E+G+LG G T L+ P+ ++ +F L V+CG +H+
Sbjct: 26 LQGWG--EFGRLGHGDTLSQLE-PKRLRFDKRFPVSLSFTALAHESLNGAIYVACGGHHT 82
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGD--KELLPRRVVALDGIFIKDVACGGVHSCAL 298
AV+E+GEV +WG G+ GQLG SG+ + +P V AL + VACG H+ +
Sbjct: 83 VAVTEDGEVVSWGWGNEGQLG-----SGNAFDQTVPAVVKALSNHRVCGVACGYYHTAVV 137
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 358
T G + WG +GQLG G T SL+P T + ++ +ACG +HTL
Sbjct: 138 TDVGLVMCWGKGNSGQLGQGDWTS--SLLPRTVSTLYN--------EKIRQIACGMAHTL 187
Query: 359 VYMRDGRIHGWGYNSYGQ--AANEKSTYAWYPSPVDWCVGEVRK---LAAGGGHSAVLAD 413
+G I+ WG + GQ + A +P V E K +A G H + D
Sbjct: 188 ALSVNGEIYSWGAGADGQLGVGKHQEETADVATPQKVRVDEEEKFEFIACGSRHCMAITD 247
Query: 414 ACSL 417
C L
Sbjct: 248 DCRL 251
>gi|307193259|gb|EFN76150.1| Probable E3 ubiquitin-protein ligase HERC4 [Harpegnathos saltator]
Length = 1054
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/320 (30%), Positives = 149/320 (46%), Gaps = 60/320 (18%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G N GQ G++ ++L++ + P F ACG HT
Sbjct: 49 VTKEGQVYSCGNNDHGQLGQEKGRKRLQLISGIDPLAFR----------KAACGSSHTLV 98
Query: 77 VASDGTLFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
V G LF+WG+N GQLG D + P VK L ++ + I+CG + A+ N
Sbjct: 99 VNEWGQLFSWGSNVEGQLGLDRVSATIREPRMVKTLGTKIIVQIACGLKHSIALT----N 154
Query: 136 DGTISTSRLWVWGQNQGSNF-----------PRLFWG-AFTPNTIICQVSCGSVHVVALS 183
+G L+ WG N P+L A P I V+CG H + +S
Sbjct: 155 NG-----ELYAWGSNSDGQLGLGSDTKMELKPKLVHSLAAVP---IAFVACGGYHTIVIS 206
Query: 184 ECGLLQAWGYNEYGQLG------RGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
+ G + AWG N +GQLG R + C+ R ++ ++ +CGE
Sbjct: 207 KSGAVFAWGRNTFGQLGLSDIQNRNVPCQ----LRTLRN-----------SRVCYAACGE 251
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
S ++ +G V+T G G GQLGH + S E+LPR+++ L G + ++CG H+ A
Sbjct: 252 EFSVFLTMDGGVFTCGAGMYGQLGHGNKTS---EILPRQIMELMGSTVTQISCGRRHTLA 308
Query: 298 LT-SKGALYAWGGSQAGQLG 316
L S+G +YAWG AGQLG
Sbjct: 309 LVPSRGRVYAWGLGGAGQLG 328
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 171/382 (44%), Gaps = 54/382 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQ-LRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++ WG G+ G G E + + P+++ E + IACG +T AV +G
Sbjct: 1 MFCWGSTIHGELGLGGIEDENIFTPREVNFE-------KANEIEQIACGDNYTIAVTKEG 53
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+++ G N+ GQLG E+GRK + + + + +CG+ T + E
Sbjct: 54 QVYSCGNNDHGQLGQ--EKGRKRLQLISGIDPLAFRKAACGSSHTLVVNE---------W 102
Query: 142 SRLWVWGQNQGSNF-----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
+L+ WG N PR+ T II Q++CG H +AL+ G L A
Sbjct: 103 GQLFSWGSNVEGQLGLDRVSATIREPRMVKTLGT--KIIVQIACGLKHSIALTNNGELYA 160
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG N GQLG G + P+++ A I V+CG YH+ +S++G V+
Sbjct: 161 WGSNSDGQLGLGSDTKMELKPKLVHSLAAV--------PIAFVACGGYHTIVISKSGAVF 212
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
WG + GQLG +Q+ + +P ++ L + ACG S LT G ++ G
Sbjct: 213 AWGRNTFGQLGLSDIQNRN---VPCQLRTLRNSRVCYAACGEEFSVFLTMDGGVFTCGAG 269
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGW 369
GQLG G +T S+ R I + ++ + V ++CG HTL + GR++ W
Sbjct: 270 MYGQLGHGNKT---------SEILPRQI-MELMGSTVTQISCGRRHTLALVPSRGRVYAW 319
Query: 370 GYNSYGQAANEKSTYAWYPSPV 391
G GQ N + + P V
Sbjct: 320 GLGGAGQLGNRIAQNSTTPQVV 341
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 159/338 (47%), Gaps = 36/338 (10%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE--NDGT 138
+F WG+ G+LG G +E P +V ++ ++ I+CG + T A+ + + + G
Sbjct: 1 MFCWGSTIHGELGLGGIEDENIFTPREVNFEKANEIEQIACGDNYTIAVTKEGQVYSCGN 60
Query: 139 ISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQ 198
+L GQ +G +L G + +CGS H + ++E G L +WG N GQ
Sbjct: 61 NDHGQL---GQEKGRKRLQLISG--IDPLAFRKAACGSSHTLVVNEWGQLFSWGSNVEGQ 115
Query: 199 LGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVG 258
LG ++ PR++K + I Q++CG HS A++ NGE+Y WG S G
Sbjct: 116 LGLDRVSATIREPRMVKTLGT--------KIIVQIACGLKHSIALTNNGELYAWGSNSDG 167
Query: 259 QLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLG 318
QLG S EL P+ V +L + I VACGG H+ ++ GA++AWG + GQLGL
Sbjct: 168 QLGLGS--DTKMELKPKLVHSLAAVPIAFVACGGYHTIVISKSGAVFAWGRNTFGQLGL- 224
Query: 319 PQTRSFSLIPNESDTYFRNIP--ILVVPNG-VQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
SD RN+P + + N V ACG ++ DG + G YG
Sbjct: 225 ------------SDIQNRNVPCQLRTLRNSRVCYAACGEEFSVFLTMDGGVFTCGAGMYG 272
Query: 376 QAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
Q + T P + +G V +++ G H+ L
Sbjct: 273 QLGHGNKTSEILPRQIMELMGSTVTQISCGRRHTLALV 310
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 91/200 (45%), Gaps = 20/200 (10%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG N GQ G G + ++ + +L L P +ACG HT ++ G
Sbjct: 158 LYAWGSNSDGQLGL-GSDTKMELKPKLVHSLAAVPIAF------VACGGYHTIVISKSGA 210
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F WG N FGQLG + R P +++ L++ V +CG + + DG + T
Sbjct: 211 VFAWGRNTFGQLGLSDIQNRNVPCQLRTLRNSRVCYAACGEEFSVFLTM----DGGVFTC 266
Query: 143 RLWVWGQ----NQGSN-FPRLFWGAFTPNTIICQVSCGSVHVVALSEC-GLLQAWGYNEY 196
++GQ N+ S PR + + Q+SCG H +AL G + AWG
Sbjct: 267 GAGMYGQLGHGNKTSEILPRQIMELM--GSTVTQISCGRRHTLALVPSRGRVYAWGLGGA 324
Query: 197 GQLGRGITCEGLQGPRVIKG 216
GQLG I + P+V+ G
Sbjct: 325 GQLGNRI-AQNSTTPQVVFG 343
>gi|282163157|ref|YP_003355542.1| hypothetical protein MCP_0487 [Methanocella paludicola SANAE]
gi|282155471|dbj|BAI60559.1| conserved hypothetical protein [Methanocella paludicola SANAE]
Length = 444
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 146/335 (43%), Gaps = 53/335 (15%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
IA G+ H A+ DGT++ WG+N++GQLGDGT P +V L VK+I+ G +
Sbjct: 76 IAAGYGHVLALKGDGTVWAWGSNKYGQLGDGTYNDSAGPVQVAGLTG--VKAIAAGKDIS 133
Query: 127 AAIAEPRENDGTISTSRLWVWGQN---QGSNFPRLFWGAFTPNTI-----ICQVSCGSVH 178
A+ + DGT+ W WG N Q + G P + I +S G H
Sbjct: 134 LAL----KGDGTV-----WAWGSNSYGQVGEGSLNYKGTAVPIQVKGLNNIQAISAGGSH 184
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
+A G + AWG N +G LG G T E ++F ++ + + G+
Sbjct: 185 CLASQGDGAVWAWGDNRHGVLGDG-TNE-----------SRFTPVRSKIYNVMGLDAGDA 232
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL----------PRRVVALDGIFIKDV 288
H+ AV +G V++WG GQLG D L P V L G +K V
Sbjct: 233 HALAVMVDGNVWSWGYNYNGQLGMGGTSLNDLGRLSFGPEADSFNPDIVRGLSG--VKSV 290
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
A G HS AL G ++ WG + GQLG+G S +P NG+
Sbjct: 291 AVGASHSVALADNGTVWTWGSNSDGQLGVGKTGGSDMTVPVRVSGI----------NGIT 340
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKST 383
V G HTL DG + WG N+ GQ N ++
Sbjct: 341 AVDAGLYHTLALKDDGSVWAWGSNAEGQVGNRSAS 375
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 117/259 (45%), Gaps = 39/259 (15%)
Query: 167 TIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPE 226
+++ +++ G HV+AL G + AWG N+YGQLG G T GP + G
Sbjct: 71 SVVRKIAAGYGHVLALKGDGTVWAWGSNKYGQLGDG-TYNDSAGPVQVAG---------- 119
Query: 227 LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
L + ++ G+ S A+ +G V+ WG S GQ+G SL +P +V L+ I+
Sbjct: 120 LTGVKAIAAGKDISLALKGDGTVWAWGSNSYGQVGEGSLNY-KGTAVPIQVKGLNN--IQ 176
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
++ GG H A GA++AWG ++ G LG G F+ P S Y
Sbjct: 177 AISAGGSHCLASQGDGAVWAWGDNRHGVLGDGTNESRFT--PVRSKIY-----------N 223
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQ------AANEKSTYAWYPSPVDWCVGEVRK 400
V + G +H L M DG + WGYN GQ + N+ ++ P + VR
Sbjct: 224 VMGLDAGDAHALAVMVDGNVWSWGYNYNGQLGMGGTSLNDLGRLSFGPEADSFNPDIVRG 283
Query: 401 L------AAGGGHSAVLAD 413
L A G HS LAD
Sbjct: 284 LSGVKSVAVGASHSVALAD 302
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 117/273 (42%), Gaps = 54/273 (19%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++ WG N GQ G + +P Q+ G N+ I+ G H A DG
Sbjct: 142 VWAWGSNSYGQVGEGSLNYKGTAVPIQVK--------GLNNI-QAISAGGSHCLASQGDG 192
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGTIS 140
++ WG N G LGDGT E R P + K V + G AH A + +
Sbjct: 193 AVWAWGDNRHGVLGDGTNESRFTPVRSKIYN---VMGLDAGDAHALAVMVD--------- 240
Query: 141 TSRLWVWGQNQG----------SNFPRLFWG----AFTPNTI-----ICQVSCGSVHVVA 181
+W WG N ++ RL +G +F P+ + + V+ G+ H VA
Sbjct: 241 -GNVWSWGYNYNGQLGMGGTSLNDLGRLSFGPEADSFNPDIVRGLSGVKSVAVGASHSVA 299
Query: 182 LSECGLLQAWGYNEYGQLGRGITC-EGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
L++ G + WG N GQLG G T + P + G + IT V G YH+
Sbjct: 300 LADNGTVWTWGSNSDGQLGVGKTGGSDMTVPVRVSG----------INGITAVDAGLYHT 349
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL 273
A+ ++G V+ WG + GQ+G+ S +G L+
Sbjct: 350 LALKDDGSVWAWGSNAEGQVGNRSASAGSPALV 382
>gi|357147842|ref|XP_003574510.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
distachyon]
Length = 389
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 153/349 (43%), Gaps = 36/349 (10%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N G G + P P E A + + A G H AV G
Sbjct: 62 LFTWGWNQRGTLGHPPETKTESSPA--PVEAL-----AGVKIVQAAIGGWHCLAVDDKGR 114
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ WG NE+GQ G EE + + + L+ + C + T
Sbjct: 115 AYAWGGNEYGQCG---EEPERKEDGTRALRRDIPTPQRCALKLKVQQVAAGGTHSVVLTQ 171
Query: 143 R--LWVWGQNQGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECGLLQAWGYNE 195
+W WGQ + TP + + ++ G+ H +ALSE +L AWG NE
Sbjct: 172 EGHVWTWGQPWPPGDIKQI---STPVRVQGLEKVMMIAVGAFHNLALSEDAVLWAWGNNE 228
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
YGQLG G T Q P ++G + + ++ G +HS A++++GEVY WG G
Sbjct: 229 YGQLGIGDTQPRSQ-PIRVEGLSGL--------SLVDIAAGGWHSTALTKDGEVYAWGRG 279
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
G+LG +S ++P +V LDG I V+CGG HS ALTS G ++++G G+L
Sbjct: 280 EHGRLGFGDDKS--SHMVPLKVQLLDGEDIVQVSCGGTHSVALTSDGRIFSYGRGDHGRL 337
Query: 316 GLGPQTRSFSLIPNESDTYFRNIPILVVPNGV---QLVACGHSHTLVYM 361
G G + + P E P+G+ VACG HTL +
Sbjct: 338 GYGRKVTTGH--PMEVPLNLPPPKTSAGPDGLWQANFVACGGRHTLAIV 384
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 157/356 (44%), Gaps = 56/356 (15%)
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
A + + WG+ E GQLG G + + +V L V ++ G+ + AI
Sbjct: 2 APLPRPAAVLAWGSGEDGQLGMGGCDEKDWAHRVAALDPYAVSAVVAGSRNSLAIC---- 57
Query: 135 NDGTISTSRLWVWGQNQGSNF--PRLFWGAFTPNTI-------ICQVSCGSVHVVALSEC 185
+DG RL+ WG NQ P +P + I Q + G H +A+ +
Sbjct: 58 DDG-----RLFTWGWNQRGTLGHPPETKTESSPAPVEALAGVKIVQAAIGGWHCLAVDDK 112
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G AWG NEYGQ G + G R ++ K+ QV+ G HS +++
Sbjct: 113 GRAYAWGGNEYGQCGEEPERK-EDGTRALRRDIPTPQRCALKLKVQQVAAGGTHSVVLTQ 171
Query: 246 NGEVYTWGL----GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
G V+TWG G + Q+ P RV L+ + + +A G H+ AL+
Sbjct: 172 EGHVWTWGQPWPPGDIKQIS-----------TPVRVQGLEKVMM--IAVGAFHNLALSED 218
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLV--ACGHSHTL 358
L+AWG ++ GQLG+G DT R+ PI V +G+ LV A G H+
Sbjct: 219 AVLWAWGNNEYGQLGIG-------------DTQPRSQPIRVEGLSGLSLVDIAAGGWHST 265
Query: 359 VYMRDGRIHGWGYNSYGQA--ANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 411
+DG ++ WG +G+ ++KS++ P V GE + +++ GG HS L
Sbjct: 266 ALTKDGEVYAWGRGEHGRLGFGDDKSSHM-VPLKVQLLDGEDIVQVSCGGTHSVAL 320
>gi|307176782|gb|EFN66182.1| Probable E3 ubiquitin-protein ligase HERC2 [Camponotus floridanus]
Length = 4802
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 178/412 (43%), Gaps = 98/412 (23%)
Query: 12 RPVDNIPAK-SAIYVWGYNHSGQTG-RKGRERQL----RIPKQLPP-------------- 51
R +D P + SA+YVWG N Q G KG + +L + +L P
Sbjct: 2951 RSIDATPPQESAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFIVS 3010
Query: 52 ---ELFGCPAGANSRW------------------------LDIACGHEHTAAVASDGTLF 84
+L+ C G N R + + G +H A+ DG +F
Sbjct: 3011 QEGKLYACGEGTNGRLGLGDDNNVCEPKPIPFLSQFVIKKVAVHSGGKHALALTQDGKVF 3070
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRL 144
+WG E G+LG G P+ ++ L+S+ ++ I+CG+ +AAIA S L
Sbjct: 3071 SWGEGEDGKLGHGNNMSLDKPKLIETLKSKRIRDIACGSGHSAAIA---------SNGEL 3121
Query: 145 WVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALSECGLLQAW 191
+ WG + + RL G P + + QV+CGS +AL+ G + +W
Sbjct: 3122 YTWGLGE---YGRLGHGDTVTQARPKLVQTLVGHRVVQVACGSRDAQTMALTTDGCVYSW 3178
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G ++G+LGRG +G P V++ + QV CG S A+++ GEV+T
Sbjct: 3179 GDGDFGKLGRG-GSDGCYTPLVVERLNGL--------GVVQVECGAQFSLALTKYGEVWT 3229
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG G +LGH + K P V L G I VA G +H A+T G +YAWG +
Sbjct: 3230 WGKGDYFRLGHGNDHHVRK---PTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDND 3286
Query: 312 AGQLGLGPQT--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
GQ G G + R SL+ D V V+CG SH++ ++
Sbjct: 3287 HGQQGNGTTSVNRKPSLVHELEDAR------------VNRVSCGSSHSIAWV 3326
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 178/402 (44%), Gaps = 56/402 (13%)
Query: 22 AIYVWGYNHSGQTG-RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
AIY WG+NH GQ G +G + +L P C + + R + +A G + AV +D
Sbjct: 3944 AIYGWGHNHRGQLGGLEGPKVKLPAP---------CESLSALRPIQLAGGEQTLFAVTAD 3994
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRE--- 134
G +++ G G+LG G + P ++ +Q F+K ++ G HC A +E
Sbjct: 3995 GKVYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEGHVYSW 4054
Query: 135 ---NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
+DG + G + P+L I ++CG H A++ G L W
Sbjct: 4055 GEGDDGKLGH------GNKMSYDRPKLIEDLL--GVEIIDIACGGHHSAAITSAGWLYTW 4106
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSENGEV 249
G YG+LG G + + L+ P+V++ + K+ V+C G+ + V+++ V
Sbjct: 4107 GKGRYGRLGHGDSDDQLR-PKVVEALQDY--------KVIDVACGSGDAQTLCVTDDDNV 4157
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y WG
Sbjct: 4158 WSWGDGDYGKLGR---GGSDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGK 4214
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGRIH 367
+LG G +D + R + G ++ +A G H + G +
Sbjct: 4215 GDYHRLGHG------------TDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVF 4262
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
WG N GQ + ++ P V G ++ ++A G H+
Sbjct: 4263 TWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAHT 4304
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 150/329 (45%), Gaps = 45/329 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G G + PK L +L G +DIACG H+AA+ S G
Sbjct: 4051 VYSWGEGDDGKLGH-GNKMSYDRPK-LIEDLLGV------EIIDIACGGHHSAAITSAGW 4102
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG G + + P+ V+ LQ V ++CG+ + +++
Sbjct: 4103 LYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDN------ 4156
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
+W WG R G P I + +V CGS VAL+ G + WG
Sbjct: 4157 -VWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKG 4215
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G T + ++ PR + A + +KI ++ G H A S+ GEV+TWG
Sbjct: 4216 DYHRLGHG-TDDHVRRPRKVA--------ALQGKKIISIATGSLHCVACSDKGEVFTWGD 4266
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G I VACG H+ AW ++A Q
Sbjct: 4267 NDEGQLGDGTTSALHR---PRLVHALQGKKITRVACGSAHT---------LAWSTAKATQ 4314
Query: 315 LGLGPQT-RSFSLIPNESDTYFRNIPILV 342
+ T + L+ + S + RN +L+
Sbjct: 4315 SRMPASTPMEYDLVKDLSYSVLRNRLVLL 4343
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 161/360 (44%), Gaps = 59/360 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y GY +G+ G G + + P L + + ++ G +H A
Sbjct: 3991 VTADGKVYSTGYGAAGRLGIGGTD------SVMIPTLLESIQHVFIKKVAVSSGGKHCLA 4044
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
++S+G +++WG + G+LG G + P+ ++ L + I+CG H +AAI
Sbjct: 4045 LSSEGHVYSWGEGDDGKLGHGNKMSYDRPKLIEDLLGVEIIDIACGGHHSAAIT------ 4098
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGS--VHVVALS 183
S L+ WG+ + + RL G P + + V+CGS + ++
Sbjct: 4099 ---SAGWLYTWGKGR---YGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVT 4152
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ + +WG +YG+LGRG +G + P I A + +V CG S A+
Sbjct: 4153 DDDNVWSWGDGDYGKLGRG-GSDGCKVPLKIDSLAGL--------GVIKVECGSQFSVAL 4203
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+ +G VYTWG G +LGH + D PR+V AL G I +A G +H A + KG
Sbjct: 4204 TRSGAVYTWGKGDYHRLGH---GTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGE 4260
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 360
++ WG + GQLG G T + P LV + VACG +HTL +
Sbjct: 4261 VFTWGDNDEGQLGDG-------------TTSALHRPRLVHALQGKKITRVACGSAHTLAW 4307
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 134/275 (48%), Gaps = 39/275 (14%)
Query: 72 EHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
+H A+ DG +++WG + G+LG G P+ ++ L + + I+CG+ +AA++
Sbjct: 519 KHHLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIEALLEKNIVFIACGSTYSAALSV 578
Query: 132 PRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-----------ICQVSCGS--VH 178
E L+ WG+ N+ RL G F I + V+CGS
Sbjct: 579 SGE---------LYTWGRG---NYGRLGHGNFDDVMIPTLVTTLKGHTVVHVACGSGDSQ 626
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
+ ++ G++ +WG +YG+LGRG T +G + P+++ K LD + +V CG
Sbjct: 627 TLCVTASGIVFSWGDGDYGKLGRGGT-DGSKTPKIVD---KLLD-----INVVKVFCGSQ 677
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
SAA++ +GEVYTWG G +LGH S + P+ + +L IKD++ G H L
Sbjct: 678 FSAALTAHGEVYTWGKGDTYRLGH---GSEEHVRYPKIIESLRDKKIKDLSVGATHILVL 734
Query: 299 TSKGALYAWGGSQAGQLG--LGPQTRSFSLIPNES 331
T +Y WG + GQ+ LG +L P S
Sbjct: 735 TEDQFVYGWGRNDYGQIDPTLGSVISEPTLCPTLS 769
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 144/342 (42%), Gaps = 36/342 (10%)
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G ++ WG N GQLG K P + L + ++ G A+ DG +
Sbjct: 3943 GAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVTA----DGKVY 3998
Query: 141 TS------RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
++ RL + G + P L VS G H +ALS G + +WG
Sbjct: 3999 STGYGAAGRLGIGGTD-SVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEGHVYSWGEG 4057
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+ G+LG G ++ K +++ +E I ++CG +HSAA++ G +YTWG
Sbjct: 4058 DDGKLG--------HGNKMSYDRPKLIEDLLGVE-IIDIACGGHHSAAITSAGWLYTWGK 4108
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQA 312
G G+LGH D +L P+ V AL + DVACG + +T +++WG
Sbjct: 4109 GRYGRLGH---GDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDY 4165
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYN 372
G+LG G +P + D+ + GV V CG ++ R G ++ WG
Sbjct: 4166 GKLGRGGS--DGCKVPLKIDS--------LAGLGVIKVECGSQFSVALTRSGAVYTWGKG 4215
Query: 373 SYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
Y + + + P V G ++ +A G H +D
Sbjct: 4216 DYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSD 4257
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 129/281 (45%), Gaps = 43/281 (15%)
Query: 129 IAEPRENDGTI-STSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHV 179
+A R D T S ++VWG N +GS + ++ GS +
Sbjct: 2947 VAVQRSIDATPPQESAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTL 3006
Query: 180 VALSECGLLQAWGYNEYGQLGRGI---TCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG 236
+S+ G L A G G+LG G CE P+ I ++F+ ++K+ V G
Sbjct: 3007 FIVSQEGKLYACGEGTNGRLGLGDDNNVCE----PKPIPFLSQFV-----IKKVA-VHSG 3056
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSC 296
H+ A++++G+V++WG G G+LGH + S DK P+ + L I+D+ACG HS
Sbjct: 3057 GKHALALTQDGKVFSWGEGEDGKLGHGNNMSLDK---PKLIETLKSKRIRDIACGSGHSA 3113
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV---VPNGVQLVACG 353
A+ S G LY WG + G+LG G DT + P LV V + V VACG
Sbjct: 3114 AIASNGELYTWGLGEYGRLGHG-------------DTVTQARPKLVQTLVGHRVVQVACG 3160
Query: 354 --HSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVD 392
+ T+ DG ++ WG +G+ S + P V+
Sbjct: 3161 SRDAQTMALTTDGCVYSWGDGDFGKLGRGGSDGCYTPLVVE 3201
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 121/291 (41%), Gaps = 53/291 (18%)
Query: 103 KHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNF------- 155
++P++V + V I+ +H DG + + WG G
Sbjct: 496 QYPQRVHGFSDKLVTMIA--SHSDGKHHLALTQDGCV-----YSWGNGDGGRLGHGDTVS 548
Query: 156 ---PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPR 212
P+L N + ++CGS + ALS G L WG YG+LG G + + P
Sbjct: 549 YDEPKLIEALLEKNIVF--IACGSTYSAALSVSGELYTWGRGNYGRLGHG-NFDDVMIPT 605
Query: 213 VI---KGYAKFLDEAPELEKITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQS 267
++ KG+ + V+CG + + V+ +G V++WG G G+LG
Sbjct: 606 LVTTLKGHT-----------VVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGR---GG 651
Query: 268 GDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQ--TRSFS 325
D P+ V L I + V CG S ALT+ G +Y WG +LG G + R
Sbjct: 652 TDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDTYRLGHGSEEHVRYPK 711
Query: 326 LIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+I + D +++ + G +H LV D ++GWG N YGQ
Sbjct: 712 IIESLRDKKIKDLSV------------GATHILVLTEDQFVYGWGRNDYGQ 750
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 121/251 (48%), Gaps = 28/251 (11%)
Query: 167 TIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPE 226
T+I S G H+ AL++ G + +WG + G+LG G T P++I+
Sbjct: 510 TMIASHSDGKHHL-ALTQDGCVYSWGNGDGGRLGHGDTV-SYDEPKLIEAL--------- 558
Query: 227 LEK-ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFI 285
LEK I ++CG +SAA+S +GE+YTWG G+ G+LGH + D ++P V L G +
Sbjct: 559 LEKNIVFIACGSTYSAALSVSGELYTWGRGNYGRLGHGNF---DDVMIPTLVTTLKGHTV 615
Query: 286 KDVACGGVHSCAL--TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
VACG S L T+ G +++WG G+LG G S + P D +I ++ V
Sbjct: 616 VHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKT--PKIVDKLL-DINVVKV 672
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLA 402
G Q A +H G ++ WG + + + YP ++ +++ L+
Sbjct: 673 FCGSQFSAALTAH-------GEVYTWGKGDTYRLGHGSEEHVRYPKIIESLRDKKIKDLS 725
Query: 403 AGGGHSAVLAD 413
G H VL +
Sbjct: 726 VGATHILVLTE 736
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 101/235 (42%), Gaps = 34/235 (14%)
Query: 190 AWGYNEYGQLGRGITCEGLQGPRV-IKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG N+ QLG GL+G ++ + Y++ L + K ++ G VS+ G+
Sbjct: 2965 VWGLNDKDQLG------GLKGSKIKLPVYSEVLSKL----KPIHIAGGSKTLFIVSQEGK 3014
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHSCALTSKGALYA 306
+Y G G+ G+LG L + P+ + L IK VA GG H+ ALT G +++
Sbjct: 3015 LYACGEGTNGRLG---LGDDNNVCEPKPIPFLSQFVIKKVAVHSGGKHALALTQDGKVFS 3071
Query: 307 WGGSQAGQLGLGPQTR--SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 364
WG + G+LG G LI R+I ACG H+ +G
Sbjct: 3072 WGEGEDGKLGHGNNMSLDKPKLIETLKSKRIRDI------------ACGSGHSAAIASNG 3119
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLA---DAC 415
++ WG YG+ + + P V VG V ++A G + +A D C
Sbjct: 3120 ELYTWGLGEYGRLGHGDTVTQARPKLVQTLVGHRVVQVACGSRDAQTMALTTDGC 3174
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 73/188 (38%), Gaps = 32/188 (17%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
I Q+ C E +S NG VY GS Q P+RV + +A
Sbjct: 467 IKQLCCTERALMILSLNGNVYNMYHGSETQ-------------YPQRVHGFSDKLVTMIA 513
Query: 290 --CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV---VP 344
G H ALT G +Y+WG G+LG G DT + P L+ +
Sbjct: 514 SHSDGKHHLALTQDGCVYSWGNGDGGRLGHG-------------DTVSYDEPKLIEALLE 560
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAA 403
+ +ACG +++ G ++ WG +YG+ + P+ V G V +A
Sbjct: 561 KNIVFIACGSTYSAALSVSGELYTWGRGNYGRLGHGNFDDVMIPTLVTTLKGHTVVHVAC 620
Query: 404 GGGHSAVL 411
G G S L
Sbjct: 621 GSGDSQTL 628
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++ WG G+ GR G + + PK + L + + + CG + +AA
Sbjct: 630 VTASGIVFSWGDGDYGKLGRGGTDGS-KTPKIVDKLL-------DINVVKVFCGSQFSAA 681
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
+ + G ++TWG + +LG G+EE ++P+ ++ L+ + +K +S GA + E
Sbjct: 682 LTAHGEVYTWGKGDTYRLGHGSEEHVRYPKIIESLRDKKIKDLSVGATHILVLTE 736
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 72/184 (39%), Gaps = 16/184 (8%)
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
QV+ A + VY WGL QLG G K LP L + +A G
Sbjct: 2946 QVAVQRSIDATPPQESAVYVWGLNDKDQLGGL---KGSKIKLPVYSEVLSKLKPIHIAGG 3002
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL--VVPNGVQL 349
++ +G LYA G G+LGLG P IP L V V
Sbjct: 3003 SKTLFIVSQEGKLYACGEGTNGRLGLGDDNNVCEPKP---------IPFLSQFVIKKVA- 3052
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHS 408
V G H L +DG++ WG G+ + + P ++ + +R +A G GHS
Sbjct: 3053 VHSGGKHALALTQDGKVFSWGEGEDGKLGHGNNMSLDKPKLIETLKSKRIRDIACGSGHS 3112
Query: 409 AVLA 412
A +A
Sbjct: 3113 AAIA 3116
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 12/170 (7%)
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G +Y WG GQLG G K LP +L + +A G A+T+ G +Y
Sbjct: 3942 SGAIYGWGHNHRGQLGGL---EGPKVKLPAPCESLSALRPIQLAGGEQTLFAVTADGKVY 3998
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
+ G AG+LG+G T S +IP T +I + + V+ G H L +G
Sbjct: 3999 STGYGAAGRLGIG-GTDSV-MIP----TLLESIQHVFIKKVA--VSSGGKHCLALSSEGH 4050
Query: 366 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADA 414
++ WG G+ + P ++ +G E+ +A GG HSA + A
Sbjct: 4051 VYSWGEGDDGKLGHGNKMSYDRPKLIEDLLGVEIIDIACGGHHSAAITSA 4100
>gi|428172054|gb|EKX40966.1| hypothetical protein GUITHDRAFT_46944, partial [Guillardia theta
CCMP2712]
Length = 355
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 157/348 (45%), Gaps = 48/348 (13%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF----VKSISCGAHCTAAIAEPRENDGT 138
+++WG N++GQLG G P + L V+SI G +A IAE DG
Sbjct: 1 VYSWGKNKYGQLGLGHTNNVPLPTGILSLSDPLNRKNVRSIGAGKSHSAVIAE----DGD 56
Query: 139 ISTSRLWVWGQNQGSNF-----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
+ T WG+ P + N V+CG H V +++ GL
Sbjct: 57 VYT-----WGRGWEGQLGHDVVTEIELEPHIV--PKMENRGSSAVACGRNHTVVVTDNGL 109
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ WG N+ GQLG G + P +I D A L + ++CGE+H+ A+ G
Sbjct: 110 IYTWGENKAGQLGTG-DLKSSNSPVLI-------DSALNLPSVLSIACGEFHTVAICIEG 161
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
+++WG GQLGH + ++ P +VV + ACGG H+ LT +YAW
Sbjct: 162 TIWSWGRNQCGQLGHGNTKTC---YFPTQVVGMAKKICIRAACGGQHTLVLTDANKIYAW 218
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G + GQLGL ++ L P+ D R +G V CG+SH++ M++ +I+
Sbjct: 219 GSNAYGQLGLNRSDKAV-LQPDIVDHLRR--------SGACHVLCGYSHSMALMKNEQIY 269
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
WG N GQ T++ P V V+++A G H A +AD
Sbjct: 270 TWGRNDCGQLGLGHYTHSPVPELVTALRSVRVQQIACGYDHCVAFVAD 317
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/381 (29%), Positives = 170/381 (44%), Gaps = 59/381 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL-DIACGHEHTAAVASDG 81
+Y WG N GQ G +P LP + N + + I G H+A +A DG
Sbjct: 1 VYSWGKNKYGQLGLGHTNN---VP--LPTGILSLSDPLNRKNVRSIGAGKSHSAVIAEDG 55
Query: 82 TLFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
++TWG GQLG D E P V ++++ +++CG + T + + +G I
Sbjct: 56 DVYTWGRGWEGQLGHDVVTEIELEPHIVPKMENRGSSAVACGRNHTVVVTD----NGLIY 111
Query: 141 TSRLWVWGQNQG----------SNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
T WG+N+ SN P L A +++ ++CG H VA+ G + +
Sbjct: 112 T-----WGENKAGQLGTGDLKSSNSPVLIDSALNLPSVL-SIACGEFHTVAICIEGTIWS 165
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG N+ GQLG G T + P + G AK + + +CG H+ +++ ++Y
Sbjct: 166 WGRNQCGQLGHGNT-KTCYFPTQVVGMAKKI--------CIRAACGGQHTLVLTDANKIY 216
Query: 251 TWGLGSVGQLGHCSLQSGDKELL-PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
WG + GQLG L DK +L P V L V CG HS AL +Y WG
Sbjct: 217 AWGSNAYGQLG---LNRSDKAVLQPDIVDHLRRSGACHVLCGYSHSMALMKNEQIYTWGR 273
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD------ 363
+ GQLGLG T S +P E T R++ VQ +ACG+ H + ++ D
Sbjct: 274 NDCGQLGLGHYTHSP--VP-ELVTALRSVR-------VQQIACGYDHCVAFVADEVEPGM 323
Query: 364 ---GRIHGWGYNSYGQAANEK 381
++ WG GQ + +
Sbjct: 324 PPLEHVYSWGRGEEGQLGHNE 344
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 118/231 (51%), Gaps = 23/231 (9%)
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ +WG N+YGQLG G T + P I + L+ + + + G+ HSA ++E+G
Sbjct: 1 VYSWGKNKYGQLGLGHT-NNVPLPTGILSLSDPLNR----KNVRSIGAGKSHSAVIAEDG 55
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
+VYTWG G GQLGH + + EL P V ++ VACG H+ +T G +Y W
Sbjct: 56 DVYTWGRGWEGQLGHDVVT--EIELEPHIVPKMENRGSSAVACGRNHTVVVTDNGLIYTW 113
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G ++AGQLG G S S + +S N+P V +ACG HT+ +G I
Sbjct: 114 GENKAGQLGTGDLKSSNSPVLIDSAL---NLP------SVLSIACGEFHTVAICIEGTIW 164
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL----AAGGGHSAVLADA 414
WG N GQ + + ++P+ V VG +K+ A GG H+ VL DA
Sbjct: 165 SWGRNQCGQLGHGNTKTCYFPTQV---VGMAKKICIRAACGGQHTLVLTDA 212
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 110/263 (41%), Gaps = 43/263 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
IY WG N +GQ G G + P + L P+ L IACG HT A+ +GT
Sbjct: 110 IYTWGENKAGQLG-TGDLKSSNSPVLIDSAL-NLPS-----VLSIACGEFHTVAICIEGT 162
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+++WG N+ GQLG G + P +V + + +CG T + + +
Sbjct: 163 IWSWGRNQCGQLGHGNTKTCYFPTQVVGMAKKICIRAACGGQHTLVLTD---------AN 213
Query: 143 RLWVWGQNQGSN--FPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGY 193
+++ WG N R P+ + C V CG H +AL + + WG
Sbjct: 214 KIYAWGSNAYGQLGLNRSDKAVLQPDIVDHLRRSGACHVLCGYSHSMALMKNEQIYTWGR 273
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGE---- 248
N+ GQLG G L A ++ Q++CG H A V++ E
Sbjct: 274 NDCGQLGLG---------HYTHSPVPELVTALRSVRVQQIACGYDHCVAFVADEVEPGMP 324
Query: 249 ----VYTWGLGSVGQLGHCSLQS 267
VY+WG G GQLGH L S
Sbjct: 325 PLEHVYSWGRGEEGQLGHNELLS 347
>gi|403377072|gb|EJY88530.1| hypothetical protein OXYTRI_12294 [Oxytricha trifallax]
Length = 709
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 164/358 (45%), Gaps = 48/358 (13%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++++G N G+LG G PE+V+ L V +S G + + E DG
Sbjct: 86 VWSFGQNTKGELGTGHYNEVLMPERVRGLPKLKVIFLSSGGKHSGLVTE----DG----- 136
Query: 143 RLWVWGQNQGSNF--PRLFWGA---FTP-----NTIICQVSCGSVHVVALSECGLLQAWG 192
+LW+ G N + G+ F P I QV+CG H +ALS+ G + WG
Sbjct: 137 KLWMCGSNLHDKLGLEGITTGSKKTFKPVELLTQIFIKQVACGDYHTLALSKEGQVYVWG 196
Query: 193 ---YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
+N+ G + P +++ +A +KI Q+ CG++HS A+ +NG +
Sbjct: 197 GSLHNKRGDRSQERKDNAKYKPVLLQSFAG--------KKIKQIDCGDFHSLALDDNGTL 248
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
Y+WG+G G+ GH + D+E P+R+ DG I + G H+ A+T+ +YAWG
Sbjct: 249 YSWGVGEKGECGHGKFE--DQE-TPQRIKFFDGKIITQIEAGNHHTLAITADNQVYAWGD 305
Query: 310 SQAGQLGLG-------PQTRSFSLIPNESDTYFRN------IPILVVPNGVQLVACGHSH 356
+ GQ G G PQ +F N + +Y + + P ++ +A G H
Sbjct: 306 GRYGQCGFGEFENTAIPQLVNFPSQGNNT-SYLDDSVQQEILEFFKDPPKIKQIAAGEMH 364
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
TLV G+I +GYN GQ + P V+ + + ++AAG HS L +
Sbjct: 365 TLVLTSSGQIFSFGYNQQGQLGHNTVDNYCRPKLVEGMLNHKTVQVAAGRNHSLCLTN 422
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 121/446 (27%), Positives = 190/446 (42%), Gaps = 81/446 (18%)
Query: 14 VDNIPAKSAIYVW--GYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGH 71
+D I A YVW G N G+ G G ++ +P+++ G P + + ++ G
Sbjct: 76 LDQIKKYHA-YVWSFGQNTKGELG-TGHYNEVLMPERVR----GLPK---LKVIFLSSGG 126
Query: 72 EHTAAVASDGTLFTWGANEFGQLG-DGTEEGRKHPEK-VKQLQSEFVKSISCGAHCTAAI 129
+H+ V DG L+ G+N +LG +G G K K V+ L F+K ++CG + T A+
Sbjct: 127 KHSGLVTEDGKLWMCGSNLHDKLGLEGITTGSKKTFKPVELLTQIFIKQVACGDYHTLAL 186
Query: 130 AEPRENDGTISTSRLWVWG-------------QNQGSNFPRLFWGAFTPNTIICQVSCGS 176
++ +++VWG + + + + +F I Q+ CG
Sbjct: 187 SKE---------GQVYVWGGSLHNKRGDRSQERKDNAKYKPVLLQSFAGKKI-KQIDCGD 236
Query: 177 VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG 236
H +AL + G L +WG E G+ G G E + P+ IK F D ITQ+ G
Sbjct: 237 FHSLALDDNGTLYSWGVGEKGECGHG-KFEDQETPQRIK----FFDGKI----ITQIEAG 287
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCSL-------------QSGDKELLPRRVVALDGI 283
+H+ A++ + +VY WG G GQ G Q + L V
Sbjct: 288 NHHTLAITADNQVYAWGDGRYGQCGFGEFENTAIPQLVNFPSQGNNTSYLDDSVQQEILE 347
Query: 284 FIKD------VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRN 337
F KD +A G +H+ LTS G ++++G +Q GQLG N D Y R
Sbjct: 348 FFKDPPKIKQIAAGEMHTLVLTSSGQIFSFGYNQQGQLG-----------HNTVDNYCR- 395
Query: 338 IPILV---VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ-AANEKSTYAWYPSPVDW 393
P LV + + VA G +H+L ++ G N YGQ ++ + +
Sbjct: 396 -PKLVEGMLNHKTVQVAAGRNHSLCLTNKNDVYACGNNQYGQCGLPDREMRKTFSHVLSL 454
Query: 394 CVGEVRKLAAGGGHSAVLADACSLKE 419
KL AGG HS V+ D K+
Sbjct: 455 LSVNSFKLYAGGFHSWVVLDEMMPKK 480
>gi|403356078|gb|EJY77629.1| Hect E3 ubiquitin ligase [Oxytricha trifallax]
Length = 1178
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 164/389 (42%), Gaps = 91/389 (23%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLD---------I 67
+ K +Y WG + GQ G L K LP ++ G P R ++ I
Sbjct: 38 VDIKGNVYSWGASACGQLG-------LASMKDLPTDVEGYPYQPTPRIIELLQSVKVIQI 90
Query: 68 ACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTA 127
ACG HT A+ DG L++WG G HP+ T+
Sbjct: 91 ACGDAHTVALTQDGKLYSWGG--------GGCGQLGHPD-------------------TS 123
Query: 128 AIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
A+ P++ DG + P+L N + QV+CG H VA+ G
Sbjct: 124 AM--PKDEDGCPYQPK------------PKLI--VVLKNLEVKQVACGKAHTVAVLNNGH 167
Query: 188 LQAWGYNEYGQLGRGITCEGLQG---------PRVIKGYAKFLDEAPELEKITQVSCGEY 238
L +WG GQLG T PR + F K+ SCG+
Sbjct: 168 LYSWGAGACGQLGHPDTSSFPADEDGYPYQPIPRCVTALKPF--------KLIHASCGDV 219
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKEL-------LPRRVVALDGIFIKDVACG 291
H+ +++ GE+Y +G GS GQLG ++ ++ +P+++ +L GIFI ++CG
Sbjct: 220 HTMVLTDQGEIYCFGGGSCGQLGFGNISQMPLDVDSCPFMPVPKKIESLQGIFIVSLSCG 279
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTY----FRNIPILVVPNGV 347
HS AL+ +G +YAWG + GQLGL +P +D F + ++ +
Sbjct: 280 DSHSMALSREGHVYAWGEATYGQLGLD----DIRDLPKNTDNKPYQPFPQKVVALMNKKI 335
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
++CG +HTL G ++ +G N+ GQ
Sbjct: 336 VAISCGETHTLALTEGGHLYSFGGNTCGQ 364
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 124/244 (50%), Gaps = 24/244 (9%)
Query: 166 NTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGY----AKFL 221
N I QV+ G H VA+ G + +WG + GQLG + + L P ++GY +
Sbjct: 22 NKGIYQVAGGDGHTVAVDIKGNVYSWGASACGQLGLA-SMKDL--PTDVEGYPYQPTPRI 78
Query: 222 DEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK-------ELLP 274
E + K+ Q++CG+ H+ A++++G++Y+WG G GQLGH + K + P
Sbjct: 79 IELLQSVKVIQIACGDAHTVALTQDGKLYSWGGGGCGQLGHPDTSAMPKDEDGCPYQPKP 138
Query: 275 RRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTY 334
+ +V L + +K VACG H+ A+ + G LY+WG GQLG P T SF P + D Y
Sbjct: 139 KLIVVLKNLEVKQVACGKAHTVAVLNNGHLYSWGAGACGQLG-HPDTSSF---PADEDGY 194
Query: 335 -FRNIPILVV---PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSP 390
++ IP V P + +CG HT+V G I+ +G S GQ + P
Sbjct: 195 PYQPIPRCVTALKPFKLIHASCGDVHTMVLTDQGEIYCFGGGSCGQLG--FGNISQMPLD 252
Query: 391 VDWC 394
VD C
Sbjct: 253 VDSC 256
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 103/206 (50%), Gaps = 26/206 (12%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKEL-------LPRRVVALDG 282
I QV+ G+ H+ AV G VY+WG + GQLG S++ ++ PR + L
Sbjct: 25 IYQVAGGDGHTVAVDIKGNVYSWGASACGQLGLASMKDLPTDVEGYPYQPTPRIIELLQS 84
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESD--TYFRNIPI 340
+ + +ACG H+ ALT G LY+WGG GQ P T S +P + D Y +
Sbjct: 85 VKVIQIACGDAHTVALTQDGKLYSWGGGGCGQ-LGHPDT---SAMPKDEDGCPYQPKPKL 140
Query: 341 LVVPNGVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQAAN-EKSTYAW----YP-SPVD 392
+VV +++ VACG +HT+ + +G ++ WG + GQ + + S++ YP P+
Sbjct: 141 IVVLKNLEVKQVACGKAHTVAVLNNGHLYSWGAGACGQLGHPDTSSFPADEDGYPYQPIP 200
Query: 393 WCVGEVRKL-----AAGGGHSAVLAD 413
CV ++ + G H+ VL D
Sbjct: 201 RCVTALKPFKLIHASCGDVHTMVLTD 226
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELF--GCPAGANSRWLDIACGHEHTAAVASD 80
+Y WG GQ G + P + F A N + + I+CG HT A+
Sbjct: 292 VYAWGEATYGQLGLDDIRDLPKNTDNKPYQPFPQKVVALMNKKIVAISCGETHTLALTEG 351
Query: 81 GTLFTWGANEFGQLGDGTEEGRK 103
G L+++G N GQLG +E K
Sbjct: 352 GHLYSFGGNTCGQLGQYVKELEK 374
>gi|340505900|gb|EGR32173.1| regulator of chromosome condensation, putative [Ichthyophthirius
multifiliis]
Length = 427
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 170/398 (42%), Gaps = 88/398 (22%)
Query: 16 NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTA 75
+ P + +Y WGY + GQ G Q P E+ ++ + + +
Sbjct: 38 DTPPQKTVYAWGYGNFGQLGLANENNQYS-----PQEV---EKLSDRNIIKVKANKSVSM 89
Query: 76 AVASDGTLFTWGANEFGQLG--DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
A++ DG ++TWG N+ G LG D T PE V++L++ +K ISCG AAI++
Sbjct: 90 ALSQDGKVYTWGKNKGGILGHYDITSFNMIQPELVEKLENIQIKQISCGPFHMAAISQDG 149
Query: 134 ENDGTISTSRLWVWGQ----------------------NQGSNFPRLFWGAFTP------ 165
E L+ WG NQ ++ G+ P
Sbjct: 150 E---------LYTWGNKDHGKLGHEIQQKSNKVEIKRGNQNYDYAE---GSMLPTKVQSL 197
Query: 166 NTIIC-QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
N I C QVSCG V L+E G + ++G + GQLG G P+ I
Sbjct: 198 NGIKCKQVSCGGQFTVVLTENGEVYSFGNSMKGQLGYQSEETGNFQPKKI---------- 247
Query: 225 PELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF 284
P+L+ I + CG+ SAAVS +G+VYTWG GQLG+ + P +V G
Sbjct: 248 PDLQNIINIDCGQQFSAAVSSSGKVYTWGNNDHGQLGN---NQSIYQARPNQVTGFGGNK 304
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP 344
I +++CG AL+++G L+ WG GQLG N +D Y P
Sbjct: 305 IINISCGDNFIAALSNEGKLFTWGYGNDGQLGH----------SNRNDLY--------AP 346
Query: 345 NGVQL------VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
++ V CG +HT ++ +++ +G + GQ
Sbjct: 347 KQIEFKEKIIKVDCGGTHTAFLTQNNQLYLFGRGNEGQ 384
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 163/355 (45%), Gaps = 43/355 (12%)
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
T++ WG FGQLG E + P++V++L + + + A+++ DG
Sbjct: 44 TVYAWGYGNFGQLGLANENNQYSPQEVEKLSDRNIIKVKANKSVSMALSQ----DG---- 95
Query: 142 SRLWVWGQNQGSNFPRLFWGAFT----------PNTIICQVSCGSVHVVALSECGLLQAW 191
+++ WG+N+G +F N I Q+SCG H+ A+S+ G L W
Sbjct: 96 -KVYTWGKNKGGILGHYDITSFNMIQPELVEKLENIQIKQISCGPFHMAAISQDGELYTW 154
Query: 192 GYNEYGQLGRGI--TCEGLQGPRVIKGY-----AKFLDEAPELE--KITQVSCGEYHSAA 242
G ++G+LG I ++ R + Y + + L K QVSCG +
Sbjct: 155 GNKDHGKLGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVV 214
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
++ENGEVY++G GQLG+ S ++G+ P+++ L I ++ CG S A++S G
Sbjct: 215 LTENGEVYSFGNSMKGQLGYQSEETGN--FQPKKIPDLQNII--NIDCGQQFSAAVSSSG 270
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
+Y WG + GQ LG + PN+ + N I ++CG +
Sbjct: 271 KVYTWGNNDHGQ--LGNNQSIYQARPNQVTGFGGNKII--------NISCGDNFIAALSN 320
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSL 417
+G++ WGY + GQ + + P +++ ++ K+ GG H+A L L
Sbjct: 321 EGKLFTWGYGNDGQLGHSNRNDLYAPKQIEFKE-KIIKVDCGGTHTAFLTQNNQL 374
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 152/362 (41%), Gaps = 61/362 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG N G G + + PEL N + I+CG H AA++ DG
Sbjct: 97 VYTWGKNKGGILGH----YDITSFNMIQPEL--VEKLENIQIKQISCGPFHMAAISQDGE 150
Query: 83 LFTWGANEFGQLGDGTE------------------EGRKHPEKVKQLQSEFVKSISCGAH 124
L+TWG + G+LG + EG P KV+ L K +SCG
Sbjct: 151 LYTWGNKDHGKLGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQ 210
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-----ICQVSCGSVHV 179
T + E E ++ + + Q++ + G F P I I + CG
Sbjct: 211 FTVVLTENGEVYSFGNSMKGQLGYQSEET-------GNFQPKKIPDLQNIINIDCGQQFS 263
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
A+S G + WG N++GQLG + + P + G+ KI +SCG+
Sbjct: 264 AAVSSSGKVYTWGNNDHGQLGNNQSIYQAR-PNQVTGFGG--------NKIINISCGDNF 314
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT 299
AA+S G+++TWG G+ GQLGH S +L + + IK V CGG H+ LT
Sbjct: 315 IAALSNEGKLFTWGYGNDGQLGH----SNRNDLYAPKQIEFKEKIIK-VDCGGTHTAFLT 369
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV---VPNGVQLVACGHSH 356
LY +G GQLG+G ES+ R P +V V V CG +
Sbjct: 370 QNNQLYLFGRGNEGQLGIGENI--------ESEAAIRTTPKIVEFFKKMKVVDVTCGGEY 421
Query: 357 TL 358
TL
Sbjct: 422 TL 423
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 140/306 (45%), Gaps = 47/306 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA----------NSRWLD 66
I +Y WG G+ G + +++ ++ + + + G+ +
Sbjct: 145 ISQDGELYTWGNKDHGKLGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQ 204
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEE-GRKHPEKVKQLQSEFVKSISCGAHC 125
++CG + T + +G ++++G + GQLG +EE G P+K+ LQ+ + +I CG
Sbjct: 205 VSCGGQFTVVLTENGEVYSFGNSMKGQLGYQSEETGNFQPKKIPDLQN--IINIDCGQQF 262
Query: 126 TAAIAEPRENDGTISTSRLWVWGQN---QGSNFPRLFWGAFTPNTI-------ICQVSCG 175
+AA++ S+ +++ WG N Q N ++ PN + I +SCG
Sbjct: 263 SAAVS---------SSGKVYTWGNNDHGQLGNNQSIYQAR--PNQVTGFGGNKIINISCG 311
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
+ ALS G L WGY GQLG L P+ I+ EKI +V C
Sbjct: 312 DNFIAALSNEGKLFTWGYGNDGQLGHS-NRNDLYAPKQIE----------FKEKIIKVDC 360
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKEL--LPRRVVALDGIFIKDVACGGV 293
G H+A +++N ++Y +G G+ GQLG + + P+ V + + DV CGG
Sbjct: 361 GGTHTAFLTQNNQLYLFGRGNEGQLGIGENIESEAAIRTTPKIVEFFKKMKVVDVTCGGE 420
Query: 294 HSCALT 299
++ A+T
Sbjct: 421 YTLAIT 426
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 105/233 (45%), Gaps = 36/233 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y +G + GQ G + E PK++P ++I CG + +AAV+S G
Sbjct: 221 VYSFGNSMKGQLGYQSEETGNFQPKKIPDL---------QNIINIDCGQQFSAAVSSSGK 271
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++TWG N+ GQLG+ + P +V + +ISCG + AA++ N+G
Sbjct: 272 VYTWGNNDHGQLGNNQSIYQARPNQVTGFGGNKIINISCGDNFIAALS----NEG----- 322
Query: 143 RLWVWGQ-NQG----SNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECGLLQAWG 192
+L+ WG N G SN L + P I I +V CG H L++ L +G
Sbjct: 323 KLFTWGYGNDGQLGHSNRNDL----YAPKQIEFKEKIIKVDCGGTHTAFLTQNNQLYLFG 378
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
GQLG G E R +F + K+ V+CG ++ A++E
Sbjct: 379 RGNEGQLGIGENIESEAAIRTTPKIVEFFKKM----KVVDVTCGGEYTLAITE 427
>gi|118398943|ref|XP_001031798.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila]
gi|89286132|gb|EAR84135.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila SB210]
Length = 443
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/372 (29%), Positives = 166/372 (44%), Gaps = 69/372 (18%)
Query: 23 IYVWGYNHSGQTGRKGR-ERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG N G G + R + P+++ L + I+CG H AAV DG
Sbjct: 103 VYSWGKNKGGILGHEDRLSFNMTQPERIEKLL-------GKKIKQISCGQFHMAAVTEDG 155
Query: 82 TLFTWGANEFGQLGDGTEEGRKH-------------------PEKVKQLQSEFVKSISCG 122
++TWG EFG+LG E ++ P+K++ L + K ++CG
Sbjct: 156 EVYTWGNKEFGKLGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAKQVACG 215
Query: 123 AHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLF--WGAFTPNTI-----ICQVSCG 175
T ++E DG +++ +G NQ + + TP I I ++S G
Sbjct: 216 IQFTVVLSE----DG-----KVYTFGYNQYGSLGYVSDQNSVTTPQLIKDLNDIVKISAG 266
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
A+++ G L WG N GQLG + + P ++ G+ I VSC
Sbjct: 267 YSFCAAITKQGKLYTWGNNRNGQLGNSQSLYQTK-PSIVTGFG-------SQNSIVDVSC 318
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK-ELLPRRVVALDGIFIKDVACGGVH 294
G+ AA+++ G++YTWG G GQLGH G+K +L R V IK +ACGG H
Sbjct: 319 GDNFIAALTQQGQLYTWGFGGDGQLGH-----GNKSDLYAPRHVEFKQKIIK-IACGGSH 372
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQL--VA 351
+ +T LY +G GQLG+G S + I R+ P LV G Q+ V
Sbjct: 373 AAFITEDNQLYQFGRGSEGQLGIGQNVASEASI--------RSTPNLVQYFKGKQVVDVT 424
Query: 352 CGHSHTLVYMRD 363
CG HT+ ++
Sbjct: 425 CGGEHTIAITQE 436
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 166/362 (45%), Gaps = 51/362 (14%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+++WG FGQLG E P +++ L + +K + G + A+ E
Sbjct: 51 VYSWGYGGFGQLGLQNENNYYTPTEIEVLTDKKIKKVEAGKSISMALTHNGE-------- 102
Query: 143 RLWVWGQNQGSNF---PRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWG 192
++ WG+N+G RL + P I I Q+SCG H+ A++E G + WG
Sbjct: 103 -VYSWGKNKGGILGHEDRLSFNMTQPERIEKLLGKKIKQISCGQFHMAAVTEDGEVYTWG 161
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAK--FLDEAPELEKI--------TQVSCGEYHSAA 242
E+G+LG + Q ++ +G +L ++ +KI QV+CG +
Sbjct: 162 NKEFGKLGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAKQVACGIQFTVV 221
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
+SE+G+VYT+G G LG+ S Q + P+ + L+ I ++ G A+T +G
Sbjct: 222 LSEDGKVYTFGYNQYGSLGYVSDQ--NSVTTPQLIKDLNDIV--KISAGYSFCAAITKQG 277
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV----PNGVQLVACGHSHTL 358
LY WG ++ GQLG S + ++ P +V N + V+CG +
Sbjct: 278 KLYTWGNNRNGQLG-------------NSQSLYQTKPSIVTGFGSQNSIVDVSCGDNFIA 324
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSLK 418
+ G+++ WG+ GQ + + + P V++ ++ K+A GG H+A + + L
Sbjct: 325 ALTQQGQLYTWGFGGDGQLGHGNKSDLYAPRHVEFKQ-KIIKIACGGSHAAFITEDNQLY 383
Query: 419 EL 420
+
Sbjct: 384 QF 385
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 182/430 (42%), Gaps = 80/430 (18%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
++ +Y WGY GQ G + E P ++ E+ + + + G + A+
Sbjct: 48 ETIVYSWGYGGFGQLGLQ-NENNYYTPTEI--EVL-----TDKKIKKVEAGKSISMALTH 99
Query: 80 DGTLFTWGANEFGQLG--DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG 137
+G +++WG N+ G LG D PE++++L + +K ISCG AA+ E E
Sbjct: 100 NGEVYSWGKNKGGILGHEDRLSFNMTQPERIEKLLGKKIKQISCGQFHMAAVTEDGE--- 156
Query: 138 TISTSRLWVWG--------------QNQGSNFPR------LFWGAFTPNTI-------IC 170
++ WG Q Q R + P I
Sbjct: 157 ------VYTWGNKEFGKLGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAK 210
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
QV+CG V LSE G + +GYN+YG LG + P++IK +L I
Sbjct: 211 QVACGIQFTVVLSEDGKVYTFGYNQYGSLGYVSDQNSVTTPQLIK----------DLNDI 260
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
++S G AA+++ G++YTWG GQLG+ K + + + I DV+C
Sbjct: 261 VKISAGYSFCAAITKQGKLYTWGNNRNGQLGNSQSLYQTKPSIVTGFGSQNSIV--DVSC 318
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYF-RNIPILVVPNGVQL 349
G ALT +G LY WG GQLG G N+SD Y R++ +
Sbjct: 319 GDNFIAALTQQGQLYTWGFGGDGQLGHG----------NKSDLYAPRHVEF---KQKIIK 365
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQ------AANEKSTYAWYPSPVDWCVG-EVRKLA 402
+ACG SH D +++ +G S GQ A+E S + P+ V + G +V +
Sbjct: 366 IACGGSHAAFITEDNQLYQFGRGSEGQLGIGQNVASEASIRST-PNLVQYFKGKQVVDVT 424
Query: 403 AGGGHSAVLA 412
GG H+ +
Sbjct: 425 CGGEHTIAIT 434
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 87/194 (44%), Gaps = 25/194 (12%)
Query: 2 DINEIIGETA--RPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
D+N+I+ +A I + +Y WG N +GQ G Q + P + G G
Sbjct: 256 DLNDIVKISAGYSFCAAITKQGKLYTWGNNRNGQLGNSQSLYQTK-----PSIVTGF--G 308
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
+ + +D++CG AA+ G L+TWG GQLG G + P V + + + +K I
Sbjct: 309 SQNSIVDVSCGDNFIAALTQQGQLYTWGFGGDGQLGHGNKSDLYAPRHV-EFKQKIIK-I 366
Query: 120 SCGAHCTAAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-------IC 170
+CG A I E + G S +L + GQN S TPN + +
Sbjct: 367 ACGGSHAAFITEDNQLYQFGRGSEGQLGI-GQNVASEASI----RSTPNLVQYFKGKQVV 421
Query: 171 QVSCGSVHVVALSE 184
V+CG H +A+++
Sbjct: 422 DVTCGGEHTIAITQ 435
>gi|150026491|ref|YP_001297317.1| RCC1 repeat-containing protein [Flavobacterium psychrophilum
JIP02/86]
gi|149773032|emb|CAL44516.1| RCC1 (Regulator of Chromosome Condensation) repeat domain protein
[Flavobacterium psychrophilum JIP02/86]
Length = 456
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 159/364 (43%), Gaps = 58/364 (15%)
Query: 22 AIYVWGYNHSGQTGRKGRERQL-RIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
++ WG N+ GQ G G IP Q+ G + W IA G+ H A+ ++
Sbjct: 40 TLWSWGRNYFGQLGTAGTPATFSNIPIQV---------GTATNWQTIAAGNAHNVAIKTN 90
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
GTL+TWG N+ QLGDG+ P ++ + + I+ G AI + DGT
Sbjct: 91 GTLWTWGHNQASQLGDGSTTNSNIPIQIGTATNW--RFITAGDEYVIAI----KLDGT-- 142
Query: 141 TSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
LW WG N + ++ +T VS G+ H +A G L AWG N
Sbjct: 143 ---LWAWGDNTYGQLGDNTTVNKIVPTQIGSDTDWLLVSAGTNHTLATKTNGTLWAWGRN 199
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
GQLG T + P I + + + V HSAA +G ++TWG
Sbjct: 200 NTGQLGDNTTLNKII-PTQIGADSDWQN----------VMASILHSAATKSDGSIWTWGN 248
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ GQLG ++ +++P + + +A G H+ A S G+L+AWGG+ +GQ
Sbjct: 249 NTNGQLGDGTVVG---KIIPVNITTVTN--CNWIAKGHQHTIAKKSDGSLWAWGGNASGQ 303
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGRIHGWGYN 372
LG ++ T +N P+ V + V SHT+ DG ++ WG N
Sbjct: 304 LG-------------DASTTQKNSPVAVSGLTTDWLTVNSKLSHTIALKNDGTLYTWGAN 350
Query: 373 SYGQ 376
YGQ
Sbjct: 351 LYGQ 354
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 159/363 (43%), Gaps = 49/363 (13%)
Query: 64 WLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA 123
W ++ G H+ + + GTL++WG N FGQLG ++ + ++I+ G
Sbjct: 22 WQSVSAGGSHSLGIRTGGTLWSWGRNYFGQLGTAGTPATFSNIPIQVGTATNWQTIAAGN 81
Query: 124 HCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQ---------VSC 174
AI + +GT LW WG NQ S G+ T + I Q ++
Sbjct: 82 AHNVAI----KTNGT-----LWTWGHNQASQLGD---GSTTNSNIPIQIGTATNWRFITA 129
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G +V+A+ G L AWG N YGQLG T + P I +L VS
Sbjct: 130 GDEYVIAIKLDGTLWAWGDNTYGQLGDNTTVNKIV-PTQIGSDTDWL----------LVS 178
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVH 294
G H+ A NG ++ WG + GQLG + + +++P ++ A D + ++V +H
Sbjct: 179 AGTNHTLATKTNGTLWAWGRNNTGQLGDNTTLN---KIIPTQIGA-DSDW-QNVMASILH 233
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGH 354
S A S G+++ WG + GQLG G T +IP + I V N +A GH
Sbjct: 234 SAATKSDGSIWTWGNNTNGQLGDG--TVVGKIIP---------VNITTVTN-CNWIAKGH 281
Query: 355 SHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADA 414
HT+ DG + WG N+ GQ + +T P V + + + H+ L +
Sbjct: 282 QHTIAKKSDGSLWAWGGNASGQLGDASTTQKNSPVAVSGLTTDWLTVNSKLSHTIALKND 341
Query: 415 CSL 417
+L
Sbjct: 342 GTL 344
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 124/306 (40%), Gaps = 42/306 (13%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I ++ WG+N + Q G G IP Q+ G + W I G E+ A
Sbjct: 87 IKTNGTLWTWGHNQASQLG-DGSTTNSNIPIQI---------GTATNWRFITAGDEYVIA 136
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DGTL+ WG N +GQLGD T + P ++ + +S G + T A + +
Sbjct: 137 IKLDGTLWAWGDNTYGQLGDNTTVNKIVPTQIGSDTDWLL--VSAGTNHTLA----TKTN 190
Query: 137 GTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
GT LW WG+N + ++ ++ V +H A G +
Sbjct: 191 GT-----LWAWGRNNTGQLGDNTTLNKIIPTQIGADSDWQNVMASILHSAATKSDGSIWT 245
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG N GQLG G T G P I + ++ G H+ A +G ++
Sbjct: 246 WGNNTNGQLGDG-TVVGKIIPVNIT----------TVTNCNWIAKGHQHTIAKKSDGSLW 294
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
WG + GQLG S + P V L ++ V H+ AL + G LY WG +
Sbjct: 295 AWGGNASGQLGDASTTQKNS---PVAVSGLTTDWLT-VNSKLSHTIALKNDGTLYTWGAN 350
Query: 311 QAGQLG 316
GQLG
Sbjct: 351 LYGQLG 356
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 107/255 (41%), Gaps = 39/255 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I ++ WG N GQ G ++ +P Q+ G+++ WL ++ G HT A
Sbjct: 137 IKLDGTLWAWGDNTYGQLGDNTTVNKI-VPTQI---------GSDTDWLLVSAGTNHTLA 186
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
++GTL+ WG N GQLGD T + P ++ S++ ++ H A ++D
Sbjct: 187 TKTNGTLWAWGRNNTGQLGDNTTLNKIIPTQIGA-DSDWQNVMASILHSAAT-----KSD 240
Query: 137 GTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTIICQVSC-----GSVHVVALSECGLLQA 190
G+I W WG N G P I +C G H +A G L A
Sbjct: 241 GSI-----WTWGNNTNGQLGDGTVVGKIIPVNITTVTNCNWIAKGHQHTIAKKSDGSLWA 295
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAK-FLDEAPELEKITQVSCGEYHSAAVSENGEV 249
WG N GQLG T + P + G +L +L H+ A+ +G +
Sbjct: 296 WGGNASGQLGDASTTQK-NSPVAVSGLTTDWLTVNSKLS----------HTIALKNDGTL 344
Query: 250 YTWGLGSVGQLGHCS 264
YTWG GQLG S
Sbjct: 345 YTWGANLYGQLGDAS 359
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 9/87 (10%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+++ WG N SGQ G + K P + +G + WL + HT A+ +DG
Sbjct: 292 SLWAWGGNASGQLGDASTTQ-----KNSPVAV----SGLTTDWLTVNSKLSHTIALKNDG 342
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKV 108
TL+TWGAN +GQLGD + + P +
Sbjct: 343 TLYTWGANLYGQLGDASNIAKDIPTLI 369
>gi|290987074|ref|XP_002676248.1| predicted protein [Naegleria gruberi]
gi|284089849|gb|EFC43504.1| predicted protein [Naegleria gruberi]
Length = 393
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 157/385 (40%), Gaps = 58/385 (15%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A A+Y WG N G+ G + + + K++P +LF IA G A+
Sbjct: 40 AGDAVYTWGRNDYGEVG----DGTVAVHKKVPFKLFSWDLQGPQDVEQIAAGAFTFYAIK 95
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQ---LQSEFVKSISCGAHCTAAIAEPREN 135
+G L+ WG N GQLGD T + P V L ++++ + G TA +
Sbjct: 96 ENGKLYAWGRNHRGQLGDKTTVTKVRPVDVYMDGALANQYIVKVCGGLSHTAVLT----- 150
Query: 136 DGTISTSRLWVWGQNQ-------------------GSNFPRLFWGAFTPNTIICQVSCGS 176
S + L+ +G N N P F G I+ + CG
Sbjct: 151 ----SNNSLYSFGDNTYGQLGIGSASSAEYKMEAVAVNLPESFAGE-----IVVDLKCGD 201
Query: 177 VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG 236
L+E G + AWG N+ GQ G GI L P I+ A + KI Q++ G
Sbjct: 202 DFTTVLTESGKVFAWGKNDKGQCGTGINSPYLTVPTPIEMAATKVHGFNFDTKIVQIAMG 261
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSC 296
Y S A+ ENG+++ WG GQ+G + ++ R AL + V G
Sbjct: 262 NYASYAIDENGKLWAWGANDQGQIGDRTWDEKNRPFSVYRYGALANQTVVRVCAGNGSVL 321
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRS-----FSLIPNESDTYFRNIPILVVPNGVQLVA 351
ALTS G L A G + GQLG G S + P +++T ++ +
Sbjct: 322 ALTSTGNLVAIGDNTYGQLGTGDYVSSGEPVVVKMKPFQNET-------------IKDIQ 368
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQ 376
CG H LV G++ +G N YGQ
Sbjct: 369 CGMFHNLVLTASGKVFAFGGNMYGQ 393
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 140/321 (43%), Gaps = 44/321 (13%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I +Y WG NH GQ G K ++R P +++ A AN + + G HTA
Sbjct: 94 IKENGKLYAWGRNHRGQLGDKTTVTKVR-----PVDVYMDGALANQYIVKVCGGLSHTAV 148
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKV------KQLQSEFVKSISCGAHCTAAIA 130
+ S+ +L+++G N +GQLG G+ ++ + + E V + CG T +
Sbjct: 149 LTSNNSLYSFGDNTYGQLGIGSASSAEYKMEAVAVNLPESFAGEIVVDLKCGDDFTTVLT 208
Query: 131 EPRENDGTISTSRLWVWGQNQ------GSNFPRLFWGA-----------FTPNTIICQVS 173
E + +++ WG+N G N P L F +T I Q++
Sbjct: 209 E---------SGKVFAWGKNDKGQCGTGINSPYLTVPTPIEMAATKVHGFNFDTKIVQIA 259
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
G+ A+ E G L AWG N+ GQ+G T + P + Y ++ + +V
Sbjct: 260 MGNYASYAIDENGKLWAWGANDQGQIGDR-TWDEKNRPFSVYRYGALANQT-----VVRV 313
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
G A++ G + G + GQLG S + ++ ++ IKD+ CG
Sbjct: 314 CAGNGSVLALTSTGNLVAIGDNTYGQLGTGDYVSSGEPVV-VKMKPFQNETIKDIQCGMF 372
Query: 294 HSCALTSKGALYAWGGSQAGQ 314
H+ LT+ G ++A+GG+ GQ
Sbjct: 373 HNLVLTASGKVFAFGGNMYGQ 393
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 62/142 (43%), Gaps = 12/142 (8%)
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV---ACGGVH 294
Y+S + VYTWG G++G ++ K +P ++ + D +DV A G
Sbjct: 33 YYSNILLAGDAVYTWGRNDYGEVGDGTVAVHKK--VPFKLFSWDLQGPQDVEQIAAGAFT 90
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGH 354
A+ G LYAWG + GQLG + D N I+ V G+
Sbjct: 91 FYAIKENGKLYAWGRNHRGQLGDKTTVTKVRPVDVYMDGALANQYIVKVCGGL------- 143
Query: 355 SHTLVYMRDGRIHGWGYNSYGQ 376
SHT V + ++ +G N+YGQ
Sbjct: 144 SHTAVLTSNNSLYSFGDNTYGQ 165
>gi|384501453|gb|EIE91944.1| hypothetical protein RO3G_16655 [Rhizopus delemar RA 99-880]
Length = 413
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 120/411 (29%), Positives = 178/411 (43%), Gaps = 53/411 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++V G N +GQ G + E ++ P L + + ++DIACG H+ A+ S+G
Sbjct: 34 VFVCGSNDAGQLGIEDVE------EKTSPVLL--ESLRSKDFVDIACGGMHSVALDSEGN 85
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L++WG N+ LG EE P K+ +FVK I+CG + T A++E
Sbjct: 86 LYSWGCNDEQALGRAGEEAV--PLKIDCNDIKFVK-IACGDNATLALSE---------QG 133
Query: 143 RLWVWGQNQGSN-------------FPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQ 189
++ WG +G N P L+ F + I+ ++ G+ H +AL G +
Sbjct: 134 NVYSWGTYRGDNGSFGFAEDIQHQKEPLLY--PFLKDKIVIDIASGANHSLALCSNGRVY 191
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
AWGYN GQLGR PR K A ++ L+ + + G YHS AV+ N E+
Sbjct: 192 AWGYNGQGQLGRYTL------PRRPK--ASLCCDSVGLKNVKMIGAGSYHSLAVTHNNEL 243
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVH-SCALTSKGALYAWG 308
Y WGL + Q C P RV + GG H S LT KG +Y +G
Sbjct: 244 YAWGLNNYRQ---CVDVDDSFIFKPTRVPLPEHFGTIASVQGGEHFSVILTLKGDVYTFG 300
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIP---ILVVPNGVQLVACGHSHTLVYMRDGR 365
AGQLGL T + T+ IP + + V ++ G L G
Sbjct: 301 RGDAGQLGLSRHTIDHLKVHPVGSTHSFYIPQPTKVPLSQTVTRISAGPEFVLARSACGE 360
Query: 366 IHGWGYNSYGQAANEKSTYAWYPSPVD---WCVGEVRKLAAGGGHSAVLAD 413
+ WG+NS N P V ++ ++AAGG HSA + +
Sbjct: 361 VFSWGFNSGHAIGNRSDQNEPTPCLVKCSHTMFVDILQVAAGGQHSAFITE 411
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 78/174 (44%), Gaps = 30/174 (17%)
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
G+V+ G GQLG ++ +++ P + +L D+ACGG+HS AL S+G LY+
Sbjct: 32 GKVFVCGSNDAGQLG---IEDVEEKTSPVLLESLRSKDFVDIACGGMHSVALDSEGNLYS 88
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLVYMRDG 364
WG + LG + +P+ + N ++ V ACG + TL G
Sbjct: 89 WGCNDEQALGRAGE---------------EAVPLKIDCNDIKFVKIACGDNATLALSEQG 133
Query: 365 RIHGWGY-----NSYGQAAN--EKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
++ WG S+G A + + YP D V ++ A+G HS L
Sbjct: 134 NVYSWGTYRGDNGSFGFAEDIQHQKEPLLYPFLKDKIVIDI---ASGANHSLAL 184
>gi|383320311|ref|YP_005381152.1| Alpha-tubulin suppressor and related RCC1 domain-containing protein
[Methanocella conradii HZ254]
gi|379321681|gb|AFD00634.1| Alpha-tubulin suppressor and related RCC1 domain-containing protein
[Methanocella conradii HZ254]
Length = 428
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 171/378 (45%), Gaps = 57/378 (15%)
Query: 54 FGCPAGANSRWLD-IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQ 112
F P + S+ ++ I+ G H + DGT++ WG N GQL + T++ + + +L
Sbjct: 18 FVVPVNSASQKVEEISAGEFHNIVLCDDGTIWEWGNNSSGQLAESTDDTKYL--LIHRLN 75
Query: 113 SEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQ------GSNFPRLFWGAFTPN 166
VKS+S G + A+ ++DGT+ W WG N+ G+ R TP
Sbjct: 76 MTGVKSVSAGMYHNLAL----KDDGTV-----WAWGYNRNGQLGDGTKITR-----STPV 121
Query: 167 TI----ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLD 222
+ + + G + AL + G L WG N YGQLG G L R+
Sbjct: 122 QVNISNVTAIFAGGLDSFALKDDGTLWGWGANFYGQLGDGTNITRLSPVRI--------- 172
Query: 223 EAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVG-------QLGHCSLQSGDKELL-P 274
++ + VS + A+ ++G V+ WG Q G + S DK +L P
Sbjct: 173 ---PIDNVKVVSSKGGSTIALKDDGTVWAWGCNIFAEDQEGRYQTGCLGVNSTDKFVLSP 229
Query: 275 RRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTY 334
RV LD +KDV GG + AL + G ++AWG GQLG G + + D
Sbjct: 230 ARVGGLDN--VKDVDAGGTFTIALKNDGTVWAWGDGSQGQLGKGFK------MNGPLDDP 281
Query: 335 FRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDW 393
+++ PI V+ + + ++ G H + DG I WGYN G+ + S + PSPV
Sbjct: 282 YQSTPIQVIGLSDIVDISAGDRHAMALKDDGTIWTWGYNMMGELG-DGSYWNTKPSPVKV 340
Query: 394 CVGEVRKLAAGGGHSAVL 411
+ +V ++AGG HS L
Sbjct: 341 NLEDVIAISAGGMHSLAL 358
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 142/317 (44%), Gaps = 55/317 (17%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++ WGYN +GQ G +I + P ++ A I G + A+ DG
Sbjct: 97 TVWAWGYNRNGQLGDG-----TKITRSTPVQVNISNVTA------IFAGGLDSFALKDDG 145
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
TL+ WGAN +GQLGDGT R P ++ + VK +S T A+ ++DGT+
Sbjct: 146 TLWGWGANFYGQLGDGTNITRLSPVRIPI---DNVKVVSSKGGSTIAL----KDDGTV-- 196
Query: 142 SRLWVWGQN--------------QGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVAL 182
W WG N G N F +P + + V G +AL
Sbjct: 197 ---WAWGCNIFAEDQEGRYQTGCLGVNSTDKF--VLSPARVGGLDNVKDVDAGGTFTIAL 251
Query: 183 SECGLLQAWGYNEYGQLGRGITCEG-LQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
G + AWG GQLG+G G L P Y + L I +S G+ H+
Sbjct: 252 KNDGTVWAWGDGSQGQLGKGFKMNGPLDDP-----YQSTPIQVIGLSDIVDISAGDRHAM 306
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A+ ++G ++TWG +G+LG S + P +V D I I + GG+HS AL
Sbjct: 307 ALKDDGTIWTWGYNMMGELGDGSYWNTKPS--PVKVNLEDVIAI---SAGGMHSLALKKD 361
Query: 302 GALYAWGGSQAGQLGLG 318
G+++AWGG+ G++G G
Sbjct: 362 GSVWAWGGNYYGEVGDG 378
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 160/380 (42%), Gaps = 48/380 (12%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
I+ WG N SGQ + + + +L + G + ++ G H A+ DG
Sbjct: 47 TIWEWGNNSSGQLAESTDDTKYLLIHRL--NMTGVKS--------VSAGMYHNLALKDDG 96
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
T++ WG N GQLGDGT+ R P Q+ V +I G + A+ ++DGT
Sbjct: 97 TVWAWGYNRNGQLGDGTKITRSTP---VQVNISNVTAIFAGGLDSFAL----KDDGT--- 146
Query: 142 SRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNE 195
LW WG N G+N RL P + VS +AL + G + AWG N
Sbjct: 147 --LWGWGANFYGQLGDGTNITRLS-PVRIPIDNVKVVSSKGGSTIALKDDGTVWAWGCNI 203
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
+ + G G G + L+ + V G + A+ +G V+ WG G
Sbjct: 204 FAEDQEGRYQTGCLGVNSTDKFVLSPARVGGLDNVKDVDAGGTFTIALKNDGTVWAWGDG 263
Query: 256 SVGQLGHCSLQSG----DKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
S GQLG +G + P +V+ L I D++ G H+ AL G ++ WG +
Sbjct: 264 SQGQLGKGFKMNGPLDDPYQSTPIQVIGLSDIV--DISAGDRHAMALKDDGTIWTWGYNM 321
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGY 371
G+LG G + + P+ V V ++ G H+L +DG + WG
Sbjct: 322 MGELGDGSYWNT------------KPSPVKVNLEDVIAISAGGMHSLALKKDGSVWAWGG 369
Query: 372 NSYGQAANEKSTYAWYPSPV 391
N YG+ + ST P P+
Sbjct: 370 NYYGEVG-DGSTDDVKPLPL 388
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 73/164 (44%), Gaps = 24/164 (14%)
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEG-------RKHPEKVKQLQSEFVKS 118
D+ G T A+ +DGT++ WG GQLG G + + P +V L +
Sbjct: 240 DVDAGGTFTIALKNDGTVWAWGDGSQGQLGKGFKMNGPLDDPYQSTPIQVIGLSD--IVD 297
Query: 119 ISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI------ICQV 172
IS G A+ ++DGTI W WG N + P+ + + +
Sbjct: 298 ISAGDRHAMAL----KDDGTI-----WTWGYNMMGELGDGSYWNTKPSPVKVNLEDVIAI 348
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKG 216
S G +H +AL + G + AWG N YG++G G T + P +I G
Sbjct: 349 SAGGMHSLALKKDGSVWAWGGNYYGEVGDGSTDDVKPLPLMIIG 392
>gi|386724712|ref|YP_006191038.1| hypothetical protein B2K_21665 [Paenibacillus mucilaginosus K02]
gi|384091837|gb|AFH63273.1| hypothetical protein B2K_21665 [Paenibacillus mucilaginosus K02]
Length = 338
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 110/336 (32%), Positives = 152/336 (45%), Gaps = 61/336 (18%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WGAN QLGDGT+ R P VK L S V IS G + A+ +DGT
Sbjct: 1 MWAWGANSNAQLGDGTKTDRYSPIPVKNLDS--VIGISAGGAASFAV----RSDGTA--- 51
Query: 143 RLWVWGQN------QGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECGLLQAW 191
W WG N G+ + RL TP + + + GS H +A+ G + AW
Sbjct: 52 --WAWGSNLFGQLGDGTTYDRL-----TPVQVQGLHSVVALEAGSSHSLAVKADGSVWAW 104
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G+N YGQLG G T + P ++G L+ + V+ G HS AV +G V+
Sbjct: 105 GWNTYGQLGDG-TTDSRSTPVQVEG----------LDSVVAVAAGSGHSLAVKADGSVWA 153
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG GQLG + + +P +V L + V+ G S AL S G ++AWG +
Sbjct: 154 WGANWSGQLGDGTYT---ESTVPVQVTGLGSVV--SVSAGNTFSSALKSDGTVWAWGAND 208
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS---HTLVYMRDGRIHG 368
+GQLG S+T N P V G+ A S ++L DG +
Sbjct: 209 SGQLG--------------SETAASNSPSPVQVTGMASAAAISSGSDYSLALKNDGTVWA 254
Query: 369 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAG 404
WGYNS GQ N +T + P V +G V +AAG
Sbjct: 255 WGYNSSGQLGNGTTTSSSAPVQVT-RLGSVVSVAAG 289
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 111/367 (30%), Positives = 158/367 (43%), Gaps = 68/367 (18%)
Query: 23 IYVWGYNHSGQTGRKGR-ERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++ WG N + Q G + +R IP + + G I+ G + AV SDG
Sbjct: 1 MWAWGANSNAQLGDGTKTDRYSPIPVKNLDSVIG-----------ISAGGAASFAVRSDG 49
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
T + WG+N FGQLGDGT R P +V+ L S V ++ G+ + A+ + DG++
Sbjct: 50 TAWAWGSNLFGQLGDGTTYDRLTPVQVQGLHS--VVALEAGSSHSLAV----KADGSV-- 101
Query: 142 SRLWVWGQN------QGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECGLLQA 190
W WG N G+ R TP + + V+ GS H +A+ G + A
Sbjct: 102 ---WAWGWNTYGQLGDGTTDSR-----STPVQVEGLDSVVAVAAGSGHSLAVKADGSVWA 153
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG N GQLG G E P + G L + VS G S+A+ +G V+
Sbjct: 154 WGANWSGQLGDGTYTESTV-PVQVTG----------LGSVVSVSAGNTFSSALKSDGTVW 202
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
WG GQLG + S P +V + +S AL + G ++AWG +
Sbjct: 203 AWGANDSGQLGSETAASNSPS--PVQVTGMASAAAISSGSD--YSLALKNDGTVWAWGYN 258
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG-VQLVACGHSHTLVYMRDGRIHGW 369
+GQLG G T S + P+ V G V VA G H L G + W
Sbjct: 259 SSGQLGNGTTTSS-------------SAPVQVTRLGSVVSVAAGPLHGLAVQSGGTVWDW 305
Query: 370 GYNSYGQ 376
G N+YGQ
Sbjct: 306 GNNTYGQ 312
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 145/325 (44%), Gaps = 50/325 (15%)
Query: 2 DINEIIGETARPVDNIPAKS--AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
+++ +IG +A + +S + WG N GQ G G P Q+ G
Sbjct: 28 NLDSVIGISAGGAASFAVRSDGTAWAWGSNLFGQLG-DGTTYDRLTPVQVQ--------G 78
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
+S + + G H+ AV +DG+++ WG N +GQLGDGT + R P +V+ L S V ++
Sbjct: 79 LHSV-VALEAGSSHSLAVKADGSVWAWGWNTYGQLGDGTTDSRSTPVQVEGLDS--VVAV 135
Query: 120 SCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI---------IC 170
+ G+ + A+ + DG++ W WG N G +T +T+ +
Sbjct: 136 AAGSGHSLAV----KADGSV-----WAWGANWSGQLGD---GTYTESTVPVQVTGLGSVV 183
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
VS G+ AL G + AWG N+ GQLG P + G A + +
Sbjct: 184 SVSAGNTFSSALKSDGTVWAWGANDSGQLGSETAASNSPSPVQVTGMASAAAISSGSD-- 241
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
+S A+ +G V+ WG S GQLG+ + S P +V L + VA
Sbjct: 242 --------YSLALKNDGTVWAWGYNSSGQLGNGTTTSSSA---PVQVTRLGSVV--SVAA 288
Query: 291 GGVHSCALTSKGALYAWGGSQAGQL 315
G +H A+ S G ++ WG + GQL
Sbjct: 289 GPLHGLAVQSGGTVWDWGNNTYGQL 313
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 120/268 (44%), Gaps = 39/268 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +++ WG+N GQ G G P Q+ G +S + +A G H+ A
Sbjct: 95 VKADGSVWAWGWNTYGQLG-DGTTDSRSTPVQVE--------GLDSV-VAVAAGSGHSLA 144
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V +DG+++ WGAN GQLGDGT P +V L S V S+S G ++A+ ++D
Sbjct: 145 VKADGSVWAWGANWSGQLGDGTYTESTVPVQVTGLGS--VVSVSAGNTFSSAL----KSD 198
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQ 189
GT+ W WG N + +P+ + +S GS + +AL G +
Sbjct: 199 GTV-----WAWGANDSGQLGSETAASNSPSPVQVTGMASAAAISSGSDYSLALKNDGTVW 253
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
AWGYN GQLG G T +V + L + V+ G H AV G V
Sbjct: 254 AWGYNSSGQLGNGTTTSSSAPVQVTR-----------LGSVVSVAAGPLHGLAVQSGGTV 302
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRV 277
+ WG + GQLG G LP +V
Sbjct: 303 WDWGNNTYGQLGDGYFGGGYDRSLPFQV 330
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 95/225 (42%), Gaps = 31/225 (13%)
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWG N QLG G + P +K L+ + +S G S AV +G
Sbjct: 1 MWAWGANSNAQLGDGTKTDRYS-PIPVK----------NLDSVIGISAGGAASFAVRSDG 49
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
+ WG GQLG + L P +V L + + G HS A+ + G+++AW
Sbjct: 50 TAWAWGSNLFGQLGDGTTY---DRLTPVQVQGLHSVVALE--AGSSHSLAVKADGSVWAW 104
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRI 366
G + GQLG G T R+ P+ V + V VA G H+L DG +
Sbjct: 105 GWNTYGQLGDGT-------------TDSRSTPVQVEGLDSVVAVAAGSGHSLAVKADGSV 151
Query: 367 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
WG N GQ + T + P V +G V ++AG S+ L
Sbjct: 152 WAWGANWSGQLGDGTYTESTVPVQVT-GLGSVVSVSAGNTFSSAL 195
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 76/167 (45%), Gaps = 21/167 (12%)
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
++ WG S QLG + P V LD + ++ GG S A+ S G +AWG
Sbjct: 1 MWAWGANSNAQLGDGTKT---DRYSPIPVKNLDSVI--GISAGGAASFAVRSDGTAWAWG 55
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIH 367
+ GQLG G TY R P+ V + V + G SH+L DG +
Sbjct: 56 SNLFGQLGDGT-------------TYDRLTPVQVQGLHSVVALEAGSSHSLAVKADGSVW 102
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLAD 413
WG+N+YGQ + + P V+ + V +AAG GHS AV AD
Sbjct: 103 AWGWNTYGQLGDGTTDSRSTPVQVE-GLDSVVAVAAGSGHSLAVKAD 148
>gi|307204521|gb|EFN83201.1| Probable E3 ubiquitin-protein ligase HERC2 [Harpegnathos saltator]
Length = 4791
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 119/413 (28%), Positives = 174/413 (42%), Gaps = 101/413 (24%)
Query: 12 RPVDNIPAKSAIYVWGYNHSGQTG-RKGRERQLRIP------KQLPP------------- 51
R D P +SA+YVWG N Q G KG +++IP +L P
Sbjct: 2942 RSTDAPPQQSAVYVWGLNDKDQLGGLKGS--KIKIPVRSEVLSKLKPIHIAGGSKTLFIV 2999
Query: 52 ----ELFGCPAGANSRW------------------------LDIACGHEHTAAVASDGTL 83
+L+ C G N R + + G +H A+ DG +
Sbjct: 3000 SQEGKLYACGEGTNGRLGLGDDYNMCEPKLIPFLSQYVIKKVAVHSGGKHALALTQDGKV 3059
Query: 84 FTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSR 143
F+WG E G+LG G P ++ L+S+ ++ I+CG+ +AAIA S
Sbjct: 3060 FSWGEGEDGKLGHGNCTTLDKPRLIESLKSKRIRDIACGSGHSAAIA---------SNGE 3110
Query: 144 LWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGS--VHVVALSECGLLQA 190
L+ WG + + RL G P + + QV+CGS ++L+ G +
Sbjct: 3111 LYTWGLGE---YGRLGHGDTATQMKPKLVQALSGQRVVQVACGSRDAQTMSLTADGCVYT 3167
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG ++G+LGRG G G Y L + + QV CG S A+++ GEV+
Sbjct: 3168 WGDGDFGKLGRG----GSDG-----CYTPLLVDRLNGLGVVQVECGAQFSLALTKYGEVW 3218
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
TWG G +LGH + K P V L G I VA G +H A+T G +YAWG +
Sbjct: 3219 TWGKGDYFRLGHGNDHHVRK---PTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDN 3275
Query: 311 QAGQLGLGPQ--TRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
GQ G G R SL+ DT V+CG SH++ ++
Sbjct: 3276 DHGQQGNGTTIVNRKPSLVHELDDTRMNR------------VSCGSSHSIAWI 3316
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/406 (25%), Positives = 177/406 (43%), Gaps = 64/406 (15%)
Query: 22 AIYVWGYNHSGQTG-RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
AIY WG+NH GQ G +G + +L P C + + R + +A G + AV +D
Sbjct: 3933 AIYGWGHNHRGQLGGLEGAKIKLPAP---------CESLSALRPIQLAGGEQTLFAVTAD 3983
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDG 137
G +++ G G+LG G + P ++ +Q F+K ++ G HC A +E
Sbjct: 3984 GKVYSTGYGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSE------ 4037
Query: 138 TISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
++ WG+ P+L I ++CG H A++ G
Sbjct: 4038 ----GHVYSWGEGDDGKLGHGNRLSYDRPKLVEDLL--GIEIVDIACGGHHSAAITSAGW 4091
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSE 245
L WG YG+LG G + + L+ P+V++ + K+ V+C G+ + V++
Sbjct: 4092 LYTWGKGRYGRLGHGDSDDQLR-PKVVEALQDY--------KVIDVACGSGDAQTLCVTD 4142
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+ V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4143 DDNVWSWGDGDYGKLGR---GGSDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVY 4199
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRD 363
WG +LG G +D + R + G ++ +A G H +
Sbjct: 4200 TWGKGDYHRLGHG------------TDDHVRRPRKVAALQGKKIISIATGSLHCVACSDK 4247
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
G + WG N GQ + ++ P V G ++ ++A G H+
Sbjct: 4248 GEVFTWGDNDEGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHT 4293
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 152/336 (45%), Gaps = 51/336 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R PK L +L G +DIACG H+AA+ S G
Sbjct: 4040 VYSWGEGDDGKLGHGNRLSYDR-PK-LVEDLLGI------EIVDIACGGHHSAAITSAGW 4091
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG G + + P+ V+ LQ V ++CG+ + +++
Sbjct: 4092 LYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDN------ 4145
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
+W WG R G P I + +V CGS VAL+ G + WG
Sbjct: 4146 -VWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKG 4204
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G T + ++ PR + A + +KI ++ G H A S+ GEV+TWG
Sbjct: 4205 DYHRLGHG-TDDHVRRPRKVA--------ALQGKKIISIATGSLHCVACSDKGEVFTWGD 4255
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G I VACG H+ AW ++A
Sbjct: 4256 NDEGQLGDGTTSALQR---PRLVHALQGKKITRVACGSAHT---------LAWSTAKA-- 4301
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
Q+R + P E D + IP V+ N + L+
Sbjct: 4302 ----TQSRMPASAPMEYD-LVKEIPFSVLRNRLVLL 4332
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 158/360 (43%), Gaps = 59/360 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y GY +G+ G G + + P L + + + G +H A
Sbjct: 3980 VTADGKVYSTGYGAAGRLGIGGTD------SVMVPTLLESIQHVFIKKVAVNSGGKHCLA 4033
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
++S+G +++WG + G+LG G P+ V+ L + I+CG H +AAI
Sbjct: 4034 LSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLVEDLLGIEIVDIACGGHHSAAIT------ 4087
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGS--VHVVALS 183
S L+ WG+ + + RL G P + + V+CGS + ++
Sbjct: 4088 ---SAGWLYTWGKGR---YGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVT 4141
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ + +WG +YG+LGRG +G + P I A + +V CG S A+
Sbjct: 4142 DDDNVWSWGDGDYGKLGRG-GSDGCKVPLKIDSLAGL--------GVIKVECGSQFSVAL 4192
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+ +G VYTWG G +LGH + D PR+V AL G I +A G +H A + KG
Sbjct: 4193 TRSGAVYTWGKGDYHRLGH---GTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGE 4249
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 360
++ WG + GQLG G T P LV + VACG +HTL +
Sbjct: 4250 VFTWGDNDEGQLGDG-------------TTSALQRPRLVHALQGKKITRVACGSAHTLAW 4296
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 140/277 (50%), Gaps = 43/277 (15%)
Query: 72 EHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
+H A+ DG +++WG + G+LG G P+ ++ L + + I+CG+ +AA++
Sbjct: 519 KHYLALTQDGCVYSWGNGDGGRLGHGDNISHDEPKLIETLLEKNIIFIACGSTYSAALS- 577
Query: 132 PRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-----------ICQVSCGS--VH 178
++ L+ WG+ N+ RL G+ T+ + V+CGS
Sbjct: 578 --------ASGELYTWGRG---NYGRLGHGSNDDVTVPTLVTTLKGHMVVHVACGSGDSQ 626
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
+ ++ G++ +WG +YG+LGRG +G + P+++ K LD + +V CG
Sbjct: 627 TLCVTASGIVFSWGDGDYGKLGRG-GSDGSKTPKIVD---KLLD-----INVVRVFCGGQ 677
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSC 296
SAA++ GEVYTWG G +LGH G++E + P+ + +L IKD++ GG H
Sbjct: 678 FSAALTARGEVYTWGKGDAYRLGH-----GNEEHVRYPKLIESLRDKKIKDLSVGGTHIL 732
Query: 297 ALTSKGALYAWGGSQAGQLG--LGPQTRSFSLIPNES 331
ALT +Y WG + GQ+ LGP SL P S
Sbjct: 733 ALTEDQFVYGWGRNDYGQIDPTLGPVVSEPSLCPTLS 769
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 106/233 (45%), Gaps = 30/233 (12%)
Query: 148 GQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEG 207
G N + P+L N I ++CGS + ALS G L WG YG+LG G + +
Sbjct: 544 GDNISHDEPKLIETLLEKNIIF--IACGSTYSAALSASGELYTWGRGNYGRLGHG-SNDD 600
Query: 208 LQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSL 265
+ P ++ + + V+CG + + V+ +G V++WG G G+LG
Sbjct: 601 VTVPTLVTTLKGHM--------VVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGR--- 649
Query: 266 QSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQ--TRS 323
D P+ V L I + V CGG S ALT++G +Y WG A +LG G + R
Sbjct: 650 GGSDGSKTPKIVDKLLDINVVRVFCGGQFSAALTARGEVYTWGKGDAYRLGHGNEEHVRY 709
Query: 324 FSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
LI + D +++ + G +H L D ++GWG N YGQ
Sbjct: 710 PKLIESLRDKKIKDLSV------------GGTHILALTEDQFVYGWGRNDYGQ 750
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 144/342 (42%), Gaps = 36/342 (10%)
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G ++ WG N GQLG K P + L + ++ G A+ DG +
Sbjct: 3932 GAIYGWGHNHRGQLGGLEGAKIKLPAPCESLSALRPIQLAGGEQTLFAVTA----DGKVY 3987
Query: 141 TS------RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
++ RL + G + P L V+ G H +ALS G + +WG
Sbjct: 3988 STGYGAAGRLGIGGTD-SVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEG 4046
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+ G+LG G R+ K +++ +E I ++CG +HSAA++ G +YTWG
Sbjct: 4047 DDGKLG--------HGNRLSYDRPKLVEDLLGIE-IVDIACGGHHSAAITSAGWLYTWGK 4097
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQA 312
G G+LGH D +L P+ V AL + DVACG + +T +++WG
Sbjct: 4098 GRYGRLGH---GDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDY 4154
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYN 372
G+LG G +P + D+ + GV V CG ++ R G ++ WG
Sbjct: 4155 GKLGRGGS--DGCKVPLKIDS--------LAGLGVIKVECGSQFSVALTRSGAVYTWGKG 4204
Query: 373 SYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
Y + + + P V G ++ +A G H +D
Sbjct: 4205 DYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSD 4246
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 126/280 (45%), Gaps = 42/280 (15%)
Query: 129 IAEPRENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVV 180
+ R D S ++VWG N +GS ++ GS +
Sbjct: 2938 VTAQRSTDAPPQQSAVYVWGLNDKDQLGGLKGSKIKIPVRSEVLSKLKPIHIAGGSKTLF 2997
Query: 181 ALSECGLLQAWGYNEYGQLGRGI---TCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
+S+ G L A G G+LG G CE P++I ++++ ++K+ V G
Sbjct: 2998 IVSQEGKLYACGEGTNGRLGLGDDYNMCE----PKLIPFLSQYV-----IKKVA-VHSGG 3047
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
H+ A++++G+V++WG G G+LGH + + DK PR + +L I+D+ACG HS A
Sbjct: 3048 KHALALTQDGKVFSWGEGEDGKLGHGNCTTLDK---PRLIESLKSKRIRDIACGSGHSAA 3104
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLVACG- 353
+ S G LY WG + G+LG G DT + P LV V VACG
Sbjct: 3105 IASNGELYTWGLGEYGRLGHG-------------DTATQMKPKLVQALSGQRVVQVACGS 3151
Query: 354 -HSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVD 392
+ T+ DG ++ WG +G+ S + P VD
Sbjct: 3152 RDAQTMSLTADGCVYTWGDGDFGKLGRGGSDGCYTPLLVD 3191
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 124/266 (46%), Gaps = 29/266 (10%)
Query: 153 SNFP-RLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
+ +P R+ + P T+I S G H +AL++ G + +WG + G+LG G + P
Sbjct: 495 TQYPQRMHSFSDKPVTMIASHSDGK-HYLALTQDGCVYSWGNGDGGRLGHGDNISHDE-P 552
Query: 212 RVIKGYAKFLDEAPELEK-ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK 270
++I+ LEK I ++CG +SAA+S +GE+YTWG G+ G+LGH S D
Sbjct: 553 KLIETL---------LEKNIIFIACGSTYSAALSASGELYTWGRGNYGRLGH---GSNDD 600
Query: 271 ELLPRRVVALDGIFIKDVACGGVHSCAL--TSKGALYAWGGSQAGQLGLGPQTRSFSLIP 328
+P V L G + VACG S L T+ G +++WG G+LG G S + P
Sbjct: 601 VTVPTLVTTLKGHMVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGSDGSKT--P 658
Query: 329 NESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYP 388
D ++ V V CG + G ++ WG + + + YP
Sbjct: 659 KIVDK--------LLDINVVRVFCGGQFSAALTARGEVYTWGKGDAYRLGHGNEEHVRYP 710
Query: 389 SPVDWCVG-EVRKLAAGGGHSAVLAD 413
++ +++ L+ GG H L +
Sbjct: 711 KLIESLRDKKIKDLSVGGTHILALTE 736
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 103/237 (43%), Gaps = 38/237 (16%)
Query: 190 AWGYNEYGQLGRGITCEGLQGPRV-IKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG N+ QLG GL+G ++ I ++ L + K ++ G VS+ G+
Sbjct: 2955 VWGLNDKDQLG------GLKGSKIKIPVRSEVLSKL----KPIHIAGGSKTLFIVSQEGK 3004
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVAC--GGVHSCALTSKGAL 304
+Y G G+ G+LG GD + P+ + L IK VA GG H+ ALT G +
Sbjct: 3005 LYACGEGTNGRLGL-----GDDYNMCEPKLIPFLSQYVIKKVAVHSGGKHALALTQDGKV 3059
Query: 305 YAWGGSQAGQLGLGPQTR--SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++WG + G+LG G T LI + R+I ACG H+
Sbjct: 3060 FSWGEGEDGKLGHGNCTTLDKPRLIESLKSKRIRDI------------ACGSGHSAAIAS 3107
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL---ADAC 415
+G ++ WG YG+ + + P V G+ V ++A G + + AD C
Sbjct: 3108 NGELYTWGLGEYGRLGHGDTATQMKPKLVQALSGQRVVQVACGSRDAQTMSLTADGC 3164
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 89/222 (40%), Gaps = 25/222 (11%)
Query: 202 GITCEGLQGPRVIKGYAKFLDE--------APELEKITQVSCGEYHSAAVSENGEVYTWG 253
GI C+ + G RV+ F ++ A + E + + + + A + VY WG
Sbjct: 2899 GIDCK-IHGLRVVGRKRIFENQLTTSVSFLASDWEVLQEQVTAQRSTDAPPQQSAVYVWG 2957
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
L QLG G K +P R L + +A G ++ +G LYA G G
Sbjct: 2958 LNDKDQLGGL---KGSKIKIPVRSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACGEGTNG 3014
Query: 314 QLGLGPQTR--SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGY 371
+LGLG LIP S + + V G H L +DG++ WG
Sbjct: 3015 RLGLGDDYNMCEPKLIPFLSQYVIKKVA----------VHSGGKHALALTQDGKVFSWGE 3064
Query: 372 NSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
G+ + T P ++ + +R +A G GHSA +A
Sbjct: 3065 GEDGKLGHGNCTTLDKPRLIESLKSKRIRDIACGSGHSAAIA 3106
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 72/172 (41%), Gaps = 16/172 (9%)
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G +Y WG GQLG G K LP +L + +A G A+T+ G +Y
Sbjct: 3931 SGAIYGWGHNHRGQLGGL---EGAKIKLPAPCESLSALRPIQLAGGEQTLFAVTADGKVY 3987
Query: 306 AWGGSQAGQLGLGPQTRSF--SLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 363
+ G AG+LG+G +L+ + + + + V G H L +
Sbjct: 3988 STGYGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVA----------VNSGGKHCLALSSE 4037
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADA 414
G ++ WG G+ + P V+ +G E+ +A GG HSA + A
Sbjct: 4038 GHVYSWGEGDDGKLGHGNRLSYDRPKLVEDLLGIEIVDIACGGHHSAAITSA 4089
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 8/106 (7%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A+ +Y WG + + G G E +R PK + + + + D++ G H A
Sbjct: 682 LTARGEVYTWGKGDAYRLGH-GNEEHVRYPKLIE-------SLRDKKIKDLSVGGTHILA 733
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG 122
+ D ++ WG N++GQ+ P L S+ V ++ G
Sbjct: 734 LTEDQFVYGWGRNDYGQIDPTLGPVVSEPSLCPTLSSKNVIGLASG 779
>gi|145593730|ref|YP_001158027.1| cell wall anchor domain-containing protein [Salinispora tropica
CNB-440]
gi|145303067|gb|ABP53649.1| LPXTG-motif cell wall anchor domain [Salinispora tropica CNB-440]
Length = 558
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 120/408 (29%), Positives = 163/408 (39%), Gaps = 63/408 (15%)
Query: 22 AIYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
AI WG N GQ G + I +LP G A +A G H+ A+ S
Sbjct: 55 AILAWGGNDGGQLGDGTTTDSSEPIAVRLP---TGTTVAA------VAAGDRHSVALTSA 105
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
GT+ WG N GQLG+GT P V + +++ GA + A+ S
Sbjct: 106 GTVLAWGRNTEGQLGNGTTTSSGEPVAVSLPSGIRIVAVAVGADHSLAL---------TS 156
Query: 141 TSRLWVWGQNQ----------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG--LL 188
T L WG N S+ P PNT + ++ G H + L+ G L
Sbjct: 157 TGSLLAWGSNDTGQLGDGSVTSSSTPVAVR--LPPNTTVAAIAAGRDHNLVLTATGPAAL 214
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
AWG N GQLG G V+ P +T ++ G HS A++ +
Sbjct: 215 LAWGANREGQLGDGT---------VVDRSRPVPVNLPTGLTVTAIAGGRDHSLALTSDDT 265
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
V WG S GQLG + LLP VV G +A G +HS ALTS G AWG
Sbjct: 266 VLAWGGNSHGQLGDGTTT---GSLLPVTVVLPVGAEATAIAAGRLHSLALTSDGTALAWG 322
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQLVACG---HSHTLVYMRDG 364
G+ GQLG G T + P+ V +P G +L++ H + +G
Sbjct: 323 GNHWGQLGNG-------------STSDSSEPVAVSLPGGTRLISIASRDSDHNVAITTEG 369
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
WG NS G + +T + P V G + +A G HS L
Sbjct: 370 AALAWGLNSQGHLGDGTTTDSATPVAVSLPAGAALTSIAVGDDHSLAL 417
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 148/352 (42%), Gaps = 54/352 (15%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P + G PA A + +AAV SD + WG N+ GQLGDGT P V
Sbjct: 31 LSPAIGGSPASARHQ--------PASAAVMSDA-ILAWGGNDGGQLGDGTTTDSSEPIAV 81
Query: 109 KQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQN---QGSNFPRLFWG---- 161
+ V +++ G + A+ S + WG+N Q N G
Sbjct: 82 RLPTGTTVAAVAAGDRHSVAL---------TSAGTVLAWGRNTEGQLGNGTTTSSGEPVA 132
Query: 162 AFTPNTI-ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF 220
P+ I I V+ G+ H +AL+ G L AWG N+ GQLG G V
Sbjct: 133 VSLPSGIRIVAVAVGADHSLALTSTGSLLAWGSNDTGQLGDG---------SVTSSSTPV 183
Query: 221 LDEAPELEKITQVSCGEYHSAAVSENGE--VYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
P + ++ G H+ ++ G + WG GQLG ++ + P V
Sbjct: 184 AVRLPPNTTVAAIAAGRDHNLVLTATGPAALLAWGANREGQLGDGTVVDRSR---PVPVN 240
Query: 279 ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
G+ + +A G HS ALTS + AWGG+ GQLG G T + SL+P
Sbjct: 241 LPTGLTVTAIAGGRDHSLALTSDDTVLAWGGNSHGQLGDG--TTTGSLLPVT-------- 290
Query: 339 PILVVPNGVQ--LVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYP 388
+V+P G + +A G H+L DG WG N +GQ N ++ + P
Sbjct: 291 --VVLPVGAEATAIAAGRLHSLALTSDGTALAWGGNHWGQLGNGSTSDSSEP 340
>gi|18076889|emb|CAC86115.1| retinitis pigmentosa GTPase regulator [Mus musculus]
Length = 1001
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/367 (31%), Positives = 173/367 (47%), Gaps = 62/367 (16%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++CG EHTA V + L+ +G+N +GQLG G++ P +K L+ E VK +CG + T
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 99
Query: 127 AAIAEPRENDGTISTSRLWVW---GQNQG----------SNFPRLFWGAFTPNTIICQVS 173
+ST V+ G N+G F ++ + FTP I Q+S
Sbjct: 100 L-----------VSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVF--FTPADTIKQLS 146
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
G+ AL+E G L WG N GQ+G V G + I+ +
Sbjct: 147 AGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVG-----------KPISWI 195
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL-----PRRVVALDGIFIKDV 288
SCG YHSA V+ +GE+YT+G G+LG S ELL P+RV+ + I+ V
Sbjct: 196 SCGYYHSAFVTMDGELYTFGEPENGKLGLPS------ELLMNHRSPQRVLGIPERVIQ-V 248
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
ACGG H+ LT K +YA+G Q GQLGLG +F +E R + +
Sbjct: 249 ACGGGHTVVLTEK-VVYAFGLGQFGQLGLG----TFLFETSEPKIIER-----IKDQKIC 298
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQ--AANEKSTYAWYPSP-VDWCVGEVRKLAAGG 405
++CG +HT + G ++ +G +G+ E T ++P+ ++ V+ +A GG
Sbjct: 299 HISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGG 358
Query: 406 GHSAVLA 412
H V A
Sbjct: 359 CHMLVFA 365
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 124/278 (44%), Gaps = 29/278 (10%)
Query: 141 TSRLWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
T ++ +G+ + N P FW F + IC +SCG H ++ L +G N +GQL
Sbjct: 11 TGAVFTFGKTKFAENIPSKFW--FKNDIPIC-LSCGDEHTAIVTGNNKLYMFGSNNWGQL 67
Query: 200 GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ 259
G G + P IK A + EK+ +CG H+ ++ G VY G + GQ
Sbjct: 68 GLGSKA-AIIKPTCIK--------ALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQ 118
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LG + D++ + V IK ++ G S ALT G L+ WG + GQ+GL
Sbjct: 119 LGLGD--TDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGL-- 174
Query: 320 QTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAAN 379
+ +S IP+E + V + ++CG+ H+ DG ++ +G G+
Sbjct: 175 EDKSNVCIPHE----------VTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGL 224
Query: 380 EKSTYAWYPSP--VDWCVGEVRKLAAGGGHSAVLADAC 415
+ SP V V ++A GGGH+ VL +
Sbjct: 225 PSELLMNHRSPQRVLGIPERVIQVACGGGHTVVLTEKV 262
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 90/195 (46%), Gaps = 38/195 (19%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+++WG N GQ G + + + IP ++ G W I+CG+ H+A V DG
Sbjct: 161 LFMWGDNSEGQIGLEDK-SNVCIPHEV-------TVGKPISW--ISCGYYHSAFVTMDGE 210
Query: 83 LFTWGANEFGQLGDGTEEGRKH--PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
L+T+G E G+LG +E H P++V + E V ++CG T + E
Sbjct: 211 LYTFGEPENGKLGLPSELLMNHRSPQRVLGI-PERVIQVACGGGHTVVLTE--------- 260
Query: 141 TSRLWVWGQNQGSNFPRLFWGAF-----TPNTI-------ICQVSCGSVHVVALSECGLL 188
++ +G Q F +L G F P I IC +SCG H ++E GLL
Sbjct: 261 -KVVYAFGLGQ---FGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLL 316
Query: 189 QAWGYNEYGQLGRGI 203
+G +G+LG G+
Sbjct: 317 YTFGDGRHGKLGLGM 331
>gi|345323514|ref|XP_003430715.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Ornithorhynchus anatinus]
Length = 806
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/360 (31%), Positives = 170/360 (47%), Gaps = 36/360 (10%)
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
N ++CG EHTA V + L+ G+N +GQLG G++ P VK L+ E VK +
Sbjct: 120 NDTLAQLSCGDEHTAFVTGNSKLYMLGSNNWGQLGLGSKTTVNKPTCVKALKPEKVKFAA 179
Query: 121 CGAHCTAAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVH 178
CG + T E G S +L + + + F ++ + FT I Q+S GS
Sbjct: 180 CGRNHTLVCTEGGNVYAAGGNSDGQLGLGDTEERTTFHQISF--FTSRYKIKQLSAGSNT 237
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
AL+E G L WG N GQ+G RV+ G + ++ VSCG Y
Sbjct: 238 SAALTEDGELYMWGDNSEGQIGLASESNVCVPCRVVIG-----------KPVSWVSCGYY 286
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
HSA V+ +GE+YT+G G+LG S Q + +P+ V + G + VACGG H+ AL
Sbjct: 287 HSALVTTDGELYTFGEPENGKLGLSSEQLKNHR-IPQLVPGISGK-VNQVACGGGHTVAL 344
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV---VPNGVQLVACGHS 355
T + +Y +G + GQLGLG + + ++P +V + VACG +
Sbjct: 345 TEED-VYTFGLGEFGQLGLG------------TCIFETSVPKVVEHLRKQKIHYVACGEN 391
Query: 356 HTLVYMRDGRIHGWGYNSYGQ--AANEKSTYAWYPSP-VDWCVGEVRKLAAGGGHSAVLA 412
HT + G ++ +G +G+ E T + P+ ++ V +A GG H V A
Sbjct: 392 HTALISDTGLMYTFGDGRHGKLGLGEENFTNQFIPTLCSNFLRFSVHLVACGGCHMLVFA 451
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 89/189 (47%), Gaps = 28/189 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y+WG N GQ G E + +P ++ + G P W ++CG+ H+A V +DG
Sbjct: 247 LYMWGDNSEGQIGL-ASESNVCVPCRV---VIGKPVS----W--VSCGYYHSALVTTDGE 296
Query: 83 LFTWGANEFGQLGDGTEEGRKH--PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
L+T+G E G+LG +E+ + H P+ V + + V ++CG T A+ E +
Sbjct: 297 LYTFGEPENGKLGLSSEQLKNHRIPQLVPGISGK-VNQVACGGGHTVALTEE-----DVY 350
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGY 193
T L +GQ + P + I V+CG H +S+ GL+ +G
Sbjct: 351 TFGLGEFGQ---LGLGTCIFETSVPKVVEHLRKQKIHYVACGENHTALISDTGLMYTFGD 407
Query: 194 NEYGQLGRG 202
+G+LG G
Sbjct: 408 GRHGKLGLG 416
>gi|148228601|ref|NP_001089142.1| retinitis pigmentosa GTPase regulator [Xenopus laevis]
gi|77808101|gb|ABB03732.1| RPGR [Xenopus laevis]
Length = 727
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/358 (32%), Positives = 169/358 (47%), Gaps = 32/358 (8%)
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
N R I+CG EHT V +G L+ +G+N +GQLG P VK L+SE V S
Sbjct: 36 NDRPAHISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKALKSEKVVFAS 95
Query: 121 CGAHCTAAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVH 178
CG + T E + + G S +L + + ++F + + F I Q+S GS
Sbjct: 96 CGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISF--FNTQYKIKQLSAGSNT 153
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
AL+ G L WG N GQL GL+ + K P I+ +SCG Y
Sbjct: 154 SAALTVDGKLFMWGDNSEGQL-------GLEKEAIYSTPQKIDIGKP----ISWISCGYY 202
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
HSA V+++GE+YT+G G+LG S K P+RV L G +K V+CGG H+ A+
Sbjct: 203 HSAFVTQDGELYTFGEPENGKLGLPS-DKLKKHKKPQRVSGLSGK-VKIVSCGGEHTIAV 260
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSF-SLIPNESDTYFRNIPILVVPNGVQLVACGHSHT 357
T K +Y +G Q GQLG G T F + +P D ++ + V CG +HT
Sbjct: 261 TEK-EVYTFGLGQFGQLGHG--TFIFETQLPKAVD--------VLTKKTILYVTCGENHT 309
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV---DWCVGEVRKLAAGGGHSAVLA 412
V G ++ +G +G+ + + P+ ++ V+ +A GG H V A
Sbjct: 310 AVITDKGLLYTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACGGCHMLVFA 367
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 93/194 (47%), Gaps = 38/194 (19%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+++WG N GQ G + +E P+++ G P W I+CG+ H+A V DG
Sbjct: 163 LFMWGDNSEGQLGLE-KEAIYSTPQKID---IGKPIS----W--ISCGYYHSAFVTQDGE 212
Query: 83 LFTWGANEFGQLGDGTEEGRKH--PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
L+T+G E G+LG +++ +KH P++V L + VK +SCG T A+ E
Sbjct: 213 LYTFGEPENGKLGLPSDKLKKHKKPQRVSGLSGK-VKIVSCGGEHTIAVTE--------- 262
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFTPNT------------IICQVSCGSVHVVALSECGLL 188
++ +G Q F +L G F T I V+CG H +++ GLL
Sbjct: 263 -KEVYTFGLGQ---FGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVITDKGLL 318
Query: 189 QAWGYNEYGQLGRG 202
+G +G+LG G
Sbjct: 319 YTFGDGRHGKLGLG 332
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 78/168 (46%), Gaps = 20/168 (11%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y +G +G+ G ++ K P+ +G + + ++CG EHT AV ++
Sbjct: 213 LYTFGEPENGKLGLPSD----KLKKHKKPQRV---SGLSGKVKIVSCGGEHTIAV-TEKE 264
Query: 83 LFTWGANEFGQLGDGTEEGRKH-PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
++T+G +FGQLG GT P+ V L + + ++CG + TA I + G + T
Sbjct: 265 VYTFGLGQFGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVITD----KGLLYT 320
Query: 142 ------SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALS 183
+L + +N + F + F T+ V+CG H++ +
Sbjct: 321 FGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQS-VACGGCHMLVFA 367
>gi|328791214|ref|XP_625074.3| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Apis
mellifera]
Length = 502
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 127/251 (50%), Gaps = 29/251 (11%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTAAIAEPRE 134
V D ++ G+N G LG G + +P+K+K+L + +K+ + G H A E
Sbjct: 39 VTKDKMVYAVGSNTSGCLGIGDTQSTLYPKKIKELCGKDIKTFAYGKGPHVLALTEE--- 95
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWG-AFTP-------NTIICQVSCGSVHVVALSECG 186
+++ WGQN F A TP N I ++CGS H +AL+ G
Sbjct: 96 -------GKVYSWGQNCHYELGNTFNNQALTPGIITNLCNEFIIDIACGSHHSLALTNDG 148
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ AWG N GQ+G C +++ + L+ +K+ +SCG+ S V+ N
Sbjct: 149 EVYAWGQNTSGQVG----CH--DDTTLVQDIPRKLNFTLTGKKVICISCGDSFSVVVTNN 202
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
GEVY+WG VGQLG +++ + + P ++ +L I I+ V CG +H+ AL+ +G LY
Sbjct: 203 GEVYSWGCNDVGQLG---IENNNDQFHPCKITSLAKIVIEKVVCGSIHTLALSDEGVLYV 259
Query: 307 WGGSQAGQLGL 317
WG + GQLGL
Sbjct: 260 WGDNNYGQLGL 270
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 112/226 (49%), Gaps = 24/226 (10%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HV+AL+E G + +WG N + +LG + L P +I E I ++CG
Sbjct: 88 HVLALTEEGKVYSWGQNCHYELGNTFNNQALT-PGIITNLCN--------EFIIDIACGS 138
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGIFIKDVACGGVHSC 296
+HS A++ +GEVY WG + GQ+G C + + +PR++ L G + ++CG S
Sbjct: 139 HHSLALTNDGEVYAWGQNTSGQVG-CHDDTTLVQDIPRKLNFTLTGKKVICISCGDSFSV 197
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
+T+ G +Y+WG + GQLG I N +D + + ++ V CG H
Sbjct: 198 VVTNNGEVYSWGCNDVGQLG----------IENNNDQFHPCKITSLAKIVIEKVVCGSIH 247
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTY-AWYPSPVDWCVGEVRKL 401
TL +G ++ WG N+YGQ W P+ ++ V E+R++
Sbjct: 248 TLALSDEGVLYVWGDNNYGQLGLTTVLLNIWKPTKLE--VPEMRRV 291
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 86/176 (48%), Gaps = 11/176 (6%)
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
H A++E G+VY+WG +LG+ ++ L P + L FI D+ACG HS AL
Sbjct: 88 HVLALTEEGKVYSWGQNCHYELGN---TFNNQALTPGIITNLCNEFIIDIACGSHHSLAL 144
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 358
T+ G +YAWG + +GQ+G T IP R + + V ++CG S ++
Sbjct: 145 TNDGEVYAWGQNTSGQVGCHDDTTLVQDIP-------RKLNFTLTGKKVICISCGDSFSV 197
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEV-RKLAAGGGHSAVLAD 413
V +G ++ WG N GQ E + ++P + V K+ G H+ L+D
Sbjct: 198 VVTNNGEVYSWGCNDVGQLGIENNNDQFHPCKITSLAKIVIEKVVCGSIHTLALSD 253
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 92/201 (45%), Gaps = 31/201 (15%)
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
H A+ +G +++WG N +LG+ P + L +EF+ I+CG+H + A+
Sbjct: 88 HVLALTEEGKVYSWGQNCHYELGNTFNNQALTPGIITNLCNEFIIDIACGSHHSLALT-- 145
Query: 133 RENDGTISTSRLWVWGQNQG------------SNFPRLFWGAFTPNTIICQVSCGSVHVV 180
NDG ++ WGQN + PR T +IC +SCG V
Sbjct: 146 --NDG-----EVYAWGQNTSGQVGCHDDTTLVQDIPRKLNFTLTGKKVIC-ISCGDSFSV 197
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
++ G + +WG N+ GQLG + P I AK + I +V CG H+
Sbjct: 198 VVTNNGEVYSWGCNDVGQLGIENNNDQFH-PCKITSLAKIV--------IEKVVCGSIHT 248
Query: 241 AAVSENGEVYTWGLGSVGQLG 261
A+S+ G +Y WG + GQLG
Sbjct: 249 LALSDEGVLYVWGDNNYGQLG 269
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 101/236 (42%), Gaps = 42/236 (17%)
Query: 23 IYVWGYNHSGQTGRKGRERQLR--IPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
+Y WG N + G + L I L E +DIACG H+ A+ +D
Sbjct: 98 VYSWGQNCHYELGNTFNNQALTPGIITNLCNEFI----------IDIACGSHHSLALTND 147
Query: 81 GTLFTWGANEFGQLG--DGTEEGRKHPEKVK-QLQSEFVKSISCGAHCTAAIAEPRENDG 137
G ++ WG N GQ+G D T + P K+ L + V ISCG + + N+G
Sbjct: 148 GEVYAWGQNTSGQVGCHDDTTLVQDIPRKLNFTLTGKKVICISCGDSFSVVVT----NNG 203
Query: 138 TISTSRLWVWG---------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG +N F + +I +V CGS+H +ALS+ G+L
Sbjct: 204 -----EVYSWGCNDVGQLGIENNNDQFHPCKITSLAK-IVIEKVVCGSIHTLALSDEGVL 257
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
WG N YGQLG + P + E PE+ ++ ++ Y+ +++
Sbjct: 258 YVWGDNNYGQLGLTTVLLNIWKPTKL--------EVPEMRRVLDIATSYYNYISIA 305
>gi|322795632|gb|EFZ18311.1| hypothetical protein SINV_02346 [Solenopsis invicta]
Length = 3628
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 175/411 (42%), Gaps = 97/411 (23%)
Query: 12 RPVDNIPAKSAIYVWGYNHSGQTG-RKGRERQL----RIPKQLPP--------------- 51
R D P +SA+YVWG N Q G KG + +L + +L P
Sbjct: 2580 RSTDTPPQQSAVYVWGLNDKDQLGGLKGSKIKLPIYSEVLSKLKPIHIAGGSKTLFIVSQ 2639
Query: 52 --ELFGCPAGANSRW------------------------LDIACGHEHTAAVASDGTLFT 85
+L+ C G N R + + G +H A+ DG +F+
Sbjct: 2640 EGKLYACGEGTNGRLGLGDDNNVCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFS 2699
Query: 86 WGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLW 145
WG E G+LG G P+ ++ L+S+ ++ I+CG+ +AAIA S L+
Sbjct: 2700 WGEGEDGKLGHGNCISLDKPKLIEILKSKRIRDIACGSGHSAAIA---------SNGELY 2750
Query: 146 VWGQNQGSNFPRLFWGAFTPNT-----------IICQVSCGS--VHVVALSECGLLQAWG 192
WG + + RL G T + QV+CGS +AL+ G + +WG
Sbjct: 2751 TWGLGE---YGRLGHGDTITQTRPKLVQALVGQRVVQVACGSRDAQTMALTTDGCVYSWG 2807
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
++G+LGRG +G P + + QV CG S A+++ GEV+TW
Sbjct: 2808 DGDFGKLGRG-GSDGCYTPLAVDRLNGL--------GVIQVECGAQFSLALTKYGEVWTW 2858
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G G +LGH + K P V L G I VA G +H A+T G +YAWG +
Sbjct: 2859 GKGDYFRLGHGNDHHVRK---PTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDH 2915
Query: 313 GQLGLGPQT--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
GQ G G + R SL+ + D V V+CG SH++ ++
Sbjct: 2916 GQQGNGATSVNRKPSLVHDLEDAR------------VNRVSCGSSHSIAWV 2954
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 139/275 (50%), Gaps = 39/275 (14%)
Query: 72 EHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
+H A+ DG +++WG + G+LG G P+ ++ L + + I+CG+ +AA++
Sbjct: 157 KHYLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIESLLDKNIVFIACGSTYSAALS- 215
Query: 132 PRENDGTISTSRLWVWGQNQGSNFPRLFWGAF----TPNTI-------ICQVSCGS--VH 178
++ L+ WG+ N+ RL G F TP + + V+CGS
Sbjct: 216 --------ASGELYTWGRG---NYGRLGHGNFDDVLTPTLVTTLKGHTVVHVACGSGDSQ 264
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
+ ++ G++ +WG +YG+LGRG T +G + P+++ K LD + +V CG
Sbjct: 265 TLCVTASGIVFSWGDGDYGKLGRGGT-DGSKTPKIVD---KLLD-----INVVKVFCGGQ 315
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
SAA++ +GEVYTWG G +LGH S + P+ + +L IKD++ G H AL
Sbjct: 316 FSAALTAHGEVYTWGKGDAYRLGH---GSEEHVRYPKVIESLRDKKIKDLSVGTTHILAL 372
Query: 299 TSKGALYAWGGSQAGQLG--LGPQTRSFSLIPNES 331
T +Y WG + GQ+ LGP +L P S
Sbjct: 373 TEDQFVYGWGRNDYGQIDPTLGPVVSEPTLCPTLS 407
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 127/280 (45%), Gaps = 42/280 (15%)
Query: 129 IAEPRENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVV 180
+A R D S ++VWG N +GS + ++ GS +
Sbjct: 2576 VAIQRSTDTPPQQSAVYVWGLNDKDQLGGLKGSKIKLPIYSEVLSKLKPIHIAGGSKTLF 2635
Query: 181 ALSECGLLQAWGYNEYGQLGRGI---TCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
+S+ G L A G G+LG G CE P+ I ++F+ ++K+ V G
Sbjct: 2636 IVSQEGKLYACGEGTNGRLGLGDDNNVCE----PKAIPFLSQFV-----IKKVA-VHSGG 2685
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
H+ A++++G+V++WG G G+LGH + S DK P+ + L I+D+ACG HS A
Sbjct: 2686 KHALALTQDGKVFSWGEGEDGKLGHGNCISLDK---PKLIEILKSKRIRDIACGSGHSAA 2742
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV---VPNGVQLVACG- 353
+ S G LY WG + G+LG G DT + P LV V V VACG
Sbjct: 2743 IASNGELYTWGLGEYGRLGHG-------------DTITQTRPKLVQALVGQRVVQVACGS 2789
Query: 354 -HSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVD 392
+ T+ DG ++ WG +G+ S + P VD
Sbjct: 2790 RDAQTMALTTDGCVYSWGDGDFGKLGRGGSDGCYTPLAVD 2829
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 102/227 (44%), Gaps = 34/227 (14%)
Query: 156 PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV-- 213
P+L N + ++CGS + ALS G L WG YG+LG G + L V
Sbjct: 190 PKLIESLLDKNIVF--IACGSTYSAALSASGELYTWGRGNYGRLGHGNFDDVLTPTLVTT 247
Query: 214 IKGYAKFLDEAPELEKITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
+KG+ + V+CG + + V+ +G V++WG G G+LG D
Sbjct: 248 LKGHT-----------VVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGR---GGTDGS 293
Query: 272 LLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQ--TRSFSLIPN 329
P+ V L I + V CGG S ALT+ G +Y WG A +LG G + R +I +
Sbjct: 294 KTPKIVDKLLDINVVKVFCGGQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIES 353
Query: 330 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
D +++ + G +H L D ++GWG N YGQ
Sbjct: 354 LRDKKIKDLSV------------GTTHILALTEDQFVYGWGRNDYGQ 388
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 82/193 (42%), Gaps = 27/193 (13%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG + G+ G + L P L G + G T
Sbjct: 214 LSASGELYTWGRGNYGRLGHGNFD------DVLTPTLVTTLKGHTVVHVACGSGDSQTLC 267
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V + G +F+WG ++G+LG G +G K P+ V +L V + CG +AA+ E
Sbjct: 268 VTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGGQFSAALTAHGE-- 325
Query: 137 GTISTSRLWVWGQ----------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
++ WG+ + +P++ + I +S G+ H++AL+E
Sbjct: 326 -------VYTWGKGDAYRLGHGSEEHVRYPKVIES--LRDKKIKDLSVGTTHILALTEDQ 376
Query: 187 LLQAWGYNEYGQL 199
+ WG N+YGQ+
Sbjct: 377 FVYGWGRNDYGQI 389
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 105/233 (45%), Gaps = 30/233 (12%)
Query: 190 AWGYNEYGQLGRGITCEGLQGPRV-IKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG N+ QLG GL+G ++ + Y++ L + K ++ G VS+ G+
Sbjct: 2593 VWGLNDKDQLG------GLKGSKIKLPIYSEVLSKL----KPIHIAGGSKTLFIVSQEGK 2642
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHSCALTSKGALYA 306
+Y G G+ G+LG L + P+ + L IK VA GG H+ ALT G +++
Sbjct: 2643 LYACGEGTNGRLG---LGDDNNVCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFS 2699
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRI 366
WG + G+LG G SL + ++ ++ +ACG H+ +G +
Sbjct: 2700 WGEGEDGKLGHG---NCISLDKPKLIEILKS-------KRIRDIACGSGHSAAIASNGEL 2749
Query: 367 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA---DAC 415
+ WG YG+ + + P V VG+ V ++A G + +A D C
Sbjct: 2750 YTWGLGEYGRLGHGDTITQTRPKLVQALVGQRVVQVACGSRDAQTMALTTDGC 2802
>gi|156406658|ref|XP_001641162.1| predicted protein [Nematostella vectensis]
gi|156228299|gb|EDO49099.1| predicted protein [Nematostella vectensis]
Length = 596
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/343 (29%), Positives = 159/343 (46%), Gaps = 40/343 (11%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++TWG G LG G + HP V+ L + ++ ++CGA T A+++ E
Sbjct: 209 IYTWGEGTNGMLGHGEDTQEAHPHVVEALLGKDIRKVACGATHTLALSKDGE-------- 260
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSEC---GLLQAW 191
++ WG G + FTP I + QV+C H A+ C G L ++
Sbjct: 261 -VFSWGSGYGGRLGQGHLRDRFTPIRICGLESLNLTQVACNEFHSAAVCACSKQGALFSF 319
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G N+YGQLG + +++ Y + + E KI++V+CG +HSAA++E+G ++
Sbjct: 320 GENDYGQLG-------IPEDKLLTSYIQCVSSLSE-HKISRVACGSFHSAALAEHGSLWL 371
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG GQLG+ + S L L + +VACG HS +T KG ++ G +
Sbjct: 372 WGCNESGQLGNGNYTSTSLPSLLEAGNDLRHDAVMEVACGDQHSAFITKKGRMFCCGDNT 431
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQLV--ACGHSHTLVYMRDGRIHG 368
GQLG L N+ D N+ + V VP + V ACG SHT V G I
Sbjct: 432 YGQLGA-------HLNDNQDDHVTYNVAVRVRVPTDFRCVHVACGDSHTAVVTDGGEIFT 484
Query: 369 WGYNSYGQAANEKSTYAWYPSPVDWCV--GEVRKLAAGGGHSA 409
WG G+ + + P+ ++ + VR ++ G H+A
Sbjct: 485 WGRGKGGRLGHGDNLNRHLPTEIEIGMEGKHVRGVSCGRAHTA 527
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/348 (28%), Positives = 156/348 (44%), Gaps = 43/348 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
IY WG +G G G + Q + P + G + R +ACG HT A++ DG
Sbjct: 209 IYTWGEGTNGMLGH-GEDTQ-----EAHPHVVEALLGKDIR--KVACGATHTLALSKDGE 260
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F+WG+ G+LG G R P ++ L+S + ++C +AA+ +
Sbjct: 261 VFSWGSGYGGRLGQGHLRDRFTPIRICGLESLNLTQVACNEFHSAAVCACSKQGA----- 315
Query: 143 RLWVWGQNQ----GSNFPRLFWGAFT-----PNTIICQVSCGSVHVVALSECGLLQAWGY 193
L+ +G+N G +L I +V+CGS H AL+E G L WG
Sbjct: 316 -LFSFGENDYGQLGIPEDKLLTSYIQCVSSLSEHKISRVACGSFHSAALAEHGSLWLWGC 374
Query: 194 NEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
NE GQLG G T L P +++ +A + +V+CG+ HSA +++ G ++
Sbjct: 375 NESGQLGNGNYTSTSL--PSLLEAGNDLRHDA-----VMEVACGDQHSAFITKKGRMFCC 427
Query: 253 GLGSVGQLGHCSLQSGDKEL---LPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
G + GQLG + D + + RV VACG H+ +T G ++ WG
Sbjct: 428 GDNTYGQLGAHLNDNQDDHVTYNVAVRVRVPTDFRCVHVACGDSHTAVVTDGGEIFTWGR 487
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT 357
+ G+LG G +P E I I + V+ V+CG +HT
Sbjct: 488 GKGGRLGHGDNLNRH--LPTE-------IEIGMEGKHVRGVSCGRAHT 526
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 109/232 (46%), Gaps = 28/232 (12%)
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ WG G LG G + P V+ EA + I +V+CG H+ A+S++G
Sbjct: 209 IYTWGEGTNGMLGHGEDTQEAH-PHVV--------EALLGKDIRKVACGATHTLALSKDG 259
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS---CALTSKGAL 304
EV++WG G G+LG L+ P R+ L+ + + VAC HS CA + +GAL
Sbjct: 260 EVFSWGSGYGGRLGQGHLRD---RFTPIRICGLESLNLTQVACNEFHSAAVCACSKQGAL 316
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 364
+++G + GQLG+ P+ + + +Y + + L + + VACG H+ G
Sbjct: 317 FSFGENDYGQLGI-PEDKLLT-------SYIQCVSSLS-EHKISRVACGSFHSAALAEHG 367
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPV----DWCVGEVRKLAAGGGHSAVLA 412
+ WG N GQ N T PS + D V ++A G HSA +
Sbjct: 368 SLWLWGCNESGQLGNGNYTSTSLPSLLEAGNDLRHDAVMEVACGDQHSAFIT 419
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 80/175 (45%), Gaps = 18/175 (10%)
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
++YTWG G+ G LGH +E P V AL G I+ VACG H+ AL+ G +++W
Sbjct: 208 DIYTWGEGTNGMLGH---GEDTQEAHPHVVEALLGKDIRKVACGATHTLALSKDGEVFSW 264
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM---RDG 364
G G+LG G F+ I I L N Q VAC H+ + G
Sbjct: 265 GSGYGGRLGQGHLRDRFTPI---------RICGLESLNLTQ-VACNEFHSAAVCACSKQG 314
Query: 365 RIHGWGYNSYGQAA--NEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSL 417
+ +G N YGQ +K ++ ++ ++A G HSA LA+ SL
Sbjct: 315 ALFSFGENDYGQLGIPEDKLLTSYIQCVSSLSEHKISRVACGSFHSAALAEHGSL 369
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 84/191 (43%), Gaps = 45/191 (23%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRW---LDIACGHEHTAAVA 78
++++WG N SGQ G G +P L AG + R +++ACG +H+A +
Sbjct: 368 SLWLWGCNESGQLG-NGNYTSTSLPSLL-------EAGNDLRHDAVMEVACGDQHSAFIT 419
Query: 79 SDGTLFTWGANEFGQLG----DGTEEGRKHPEKVK-QLQSEF-VKSISCGAHCTAAIAEP 132
G +F G N +GQLG D ++ + V+ ++ ++F ++CG TA + +
Sbjct: 420 KKGRMFCCGDNTYGQLGAHLNDNQDDHVTYNVAVRVRVPTDFRCVHVACGDSHTAVVTDG 479
Query: 133 RENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI--------ICQVSCGSVHVV 180
E ++ WG+ +G RL G P I + VSCG H
Sbjct: 480 GE---------IFTWGRGKGG---RLGHGDNLNRHLPTEIEIGMEGKHVRGVSCGRAH-- 525
Query: 181 ALSECGLLQAW 191
+ C + +AW
Sbjct: 526 --TACTVTRAW 534
>gi|114565730|ref|YP_752884.1| alpha-tubulin suppressor-like protein [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
gi|114336665|gb|ABI67513.1| Alpha-tubulin suppressor and related RCC1 domain-containing
proteins-like protein [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
Length = 726
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 169/357 (47%), Gaps = 37/357 (10%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGT-------EEGRKHPEKVKQLQ-SEFVKS 118
+A G + A+ D L+ WG + +GQ+G+G G++ P + + +E K
Sbjct: 54 VAAGEATSFALREDQKLWGWGIDNYGQVGNGKIIVDGDERNGQETPYLLTEKGFNEGFKQ 113
Query: 119 ISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAF-TPNTI-----ICQV 172
++ G T A+ +NDGT+ W WG N+ L G TP I + V
Sbjct: 114 VAAGRWHTLAV----KNDGTV-----WGWGNNEKGQLGNLPLGPHSTPQQIPNLQNMKAV 164
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
+CG +AL+ G + AWG N+ +LGRG T P +KG L+ +T
Sbjct: 165 ACGEFFSLALNNDGTVWAWGNNDGNELGRGATGPFYNNPEKVKGPGG----TGYLDNVTA 220
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
++CG +H A+ +G V+ WG GS G LG+ + +E+ P RV+ L G +K + G
Sbjct: 221 IACGRFHGLALKSDGTVWAWGDGSWGTLGNG--EDFSEEVYPVRVLNLTG--VKSIDAGD 276
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVAC 352
S AL + G ++AWGG G + F IP + + + L N V+ + C
Sbjct: 277 YFSLALKNDGTVWAWGGRGIGGQLGDGEVDDFVNIPQQ----VKGLNGLGNLNNVEAITC 332
Query: 353 GHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV-DWCVGEVRKLAAGGGHS 408
G +H+L +G I WG N YG+ + +T + P PV + V +AAGG HS
Sbjct: 333 GINHSLALKDNGTILAWGEN-YGRLGDGDATSSESPVPVLTQDISGVVAIAAGGEHS 388
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 166/377 (44%), Gaps = 62/377 (16%)
Query: 23 IYVWGYNHSGQTGR-----KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAV 77
++ WG ++ GQ G G ER Q P L G N + +A G HT AV
Sbjct: 70 LWGWGIDNYGQVGNGKIIVDGDERN----GQETPYLL-TEKGFNEGFKQVAAGRWHTLAV 124
Query: 78 ASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG 137
+DGT++ WG NE GQLG+ P+++ LQ+ +K+++CG + A+ NDG
Sbjct: 125 KNDGTVWGWGNNEKGQLGNLPLGPHSTPQQIPNLQN--MKAVACGEFFSLAL----NNDG 178
Query: 138 TISTSRLWVWGQNQGSNFPRLFWGAF--TPNTI-----------ICQVSCGSVHVVALSE 184
T+ W WG N G+ R G F P + + ++CG H +AL
Sbjct: 179 TV-----WAWGNNDGNELGRGATGPFYNNPEKVKGPGGTGYLDNVTAIACGRFHGLALKS 233
Query: 185 CGLLQAWGYNEYGQLGRGIT-CEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
G + AWG +G LG G E + RV+ L + + G+Y S A+
Sbjct: 234 DGTVWAWGDGSWGTLGNGEDFSEEVYPVRVLN-----------LTGVKSIDAGDYFSLAL 282
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV----VALDGIFIKDVACGGVHSCALT 299
+G V+ WG +G + D +P++V + ++ + CG HS AL
Sbjct: 283 KNDGTVWAWGGRGIGGQLGDG-EVDDFVNIPQQVKGLNGLGNLNNVEAITCGINHSLALK 341
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
G + AW G G+LG G T S S +P ++I +GV +A G H+L
Sbjct: 342 DNGTILAW-GENYGRLGDGDATSSESPVP----VLTQDI------SGVVAIAAGGEHSLA 390
Query: 360 YMRDGRIHGWGYNSYGQ 376
DG + WG N + Q
Sbjct: 391 RKNDGTVWAWGSNHHYQ 407
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 110/251 (43%), Gaps = 27/251 (10%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEK 229
QV+ G AL E L WG + YGQ+G G I +G + R + L E E
Sbjct: 53 QVAAGEATSFALREDQKLWGWGIDNYGQVGNGKIIVDGDE--RNGQETPYLLTEKGFNEG 110
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
QV+ G +H+ AV +G V+ WG GQLG+ L P+++ L +K VA
Sbjct: 111 FKQVAAGRWHTLAVKNDGTVWGWGNNEKGQLGNLPL---GPHSTPQQIPNLQN--MKAVA 165
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG--- 346
CG S AL + G ++AWG + +LG G + ++ N + P G
Sbjct: 166 CGEFFSLALNNDGTVWAWGNNDGNELGRG-----------ATGPFYNNPEKVKGPGGTGY 214
Query: 347 ---VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAAN-EKSTYAWYPSPVDWCVGEVRKLA 402
V +ACG H L DG + WG S+G N E + YP V G V+ +
Sbjct: 215 LDNVTAIACGRFHGLALKSDGTVWAWGDGSWGTLGNGEDFSEEVYPVRVLNLTG-VKSID 273
Query: 403 AGGGHSAVLAD 413
AG S L +
Sbjct: 274 AGDYFSLALKN 284
>gi|387928890|ref|ZP_10131567.1| regulator of chromosome condensation-like protein [Bacillus
methanolicus PB1]
gi|387585708|gb|EIJ78032.1| regulator of chromosome condensation-like protein [Bacillus
methanolicus PB1]
Length = 641
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 167/402 (41%), Gaps = 66/402 (16%)
Query: 24 YVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTL 83
+ WG N GQ G G +P + ++ + I G H+ +V SDG +
Sbjct: 4 FSWGNNEFGQLG-DGTNIDSNVPVSV---------NGSTNSIAITGGIFHSLSVLSDGLV 53
Query: 84 FTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSR 143
WGAN GQLGDGT PE V L + ++ G + A+ +S S
Sbjct: 54 CAWGANYSGQLGDGTLNDSNIPEIVTALTNAI--EVAAGVFHSLAL---------LSNST 102
Query: 144 LWVWGQN-QGSNFPRLFWGAFTPNTII-----CQVSCGSVHVVALSECGLLQAWGYNEYG 197
+ WG N G F + P ++I +S G H +AL G ++AWG N +G
Sbjct: 103 VRAWGDNFAGQLGDGTFNSSTVPVSVIGLTNAIAISAGLNHSLALLNDGTVRAWGGNFFG 162
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG G P +I G L + VS G HS A+ +G V WG
Sbjct: 163 QLGNGTDITS-NAPVIILG----------LSNVVAVSAGGEHSLALLYDGTVCAWGANYS 211
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKD----VACGGVHSCALTSKGALYAWGGSQAG 313
GQLG + +P +V + G + + ++ G HS AL + G + AWG + G
Sbjct: 212 GQLGD---GTNTDRSIPVQVKGIGGSGVLNNVIAISAGEFHSLALLNDGTVLAWGNNDYG 268
Query: 314 QLGLGPQTRSFSLIPNESDTYFRNIPILV-------VPNGVQLVACGHSHTLVYMRDGRI 366
QLG G T S N+P+ V V N V +A G H+L + DG +
Sbjct: 269 QLGDGTNTES-------------NVPVQVKGTGGYGVLNNVAAIAAGGFHSLALLNDGTV 315
Query: 367 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
WG N GQ + ++ + P V +A GG HS
Sbjct: 316 LAWGNNESGQLGDGSNSDSDIPVTVSGLTNS-NTIAGGGDHS 356
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 152/359 (42%), Gaps = 67/359 (18%)
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
T F+WG NEFGQLGDGT P V + +I+ G + ++ +S
Sbjct: 2 TTFSWGNNEFGQLGDGTNIDSNVPVSVNGSTNSI--AITGGIFHSLSV---------LSD 50
Query: 142 SRLWVWGQN----------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
+ WG N SN P + T T +V+ G H +AL ++AW
Sbjct: 51 GLVCAWGANYSGQLGDGTLNDSNIPEI----VTALTNAIEVAAGVFHSLALLSNSTVRAW 106
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G N GQLG G T P + G L +S G HS A+ +G V
Sbjct: 107 GDNFAGQLGDG-TFNSSTVPVSVIG----------LTNAIAISAGLNHSLALLNDGTVRA 155
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG GQLG+ + + + P ++ L + V+ GG HS AL G + AWG +
Sbjct: 156 WGGNFFGQLGNGTDITSNA---PVIILGLSNVVA--VSAGGEHSLALLYDGTVCAWGANY 210
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILV-------VPNGVQLVACGHSHTLVYMRDG 364
+GQLG G T R+IP+ V V N V ++ G H+L + DG
Sbjct: 211 SGQLGDGTNTD-------------RSIPVQVKGIGGSGVLNNVIAISAGEFHSLALLNDG 257
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-----EVRKLAAGGGHS-AVLADACSL 417
+ WG N YGQ + +T + P V G V +AAGG HS A+L D L
Sbjct: 258 TVLAWGNNDYGQLGDGTNTESNVPVQVKGTGGYGVLNNVAAIAAGGFHSLALLNDGTVL 316
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 125/290 (43%), Gaps = 45/290 (15%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
+ S + WG N +GQ G +P + G + + I+ G H+ A+
Sbjct: 99 SNSTVRAWGDNFAGQLGDGTFNS-----STVPVSVIGL-----TNAIAISAGLNHSLALL 148
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
+DGT+ WG N FGQLG+GT+ P + L + V ++S G + A+ DGT
Sbjct: 149 NDGTVRAWGGNFFGQLGNGTDITSNAPVIILGLSN--VVAVSAGGEHSLALLY----DGT 202
Query: 139 ISTSRLWVWGQN------QGSNFPRL-------FWGAFTPNTIICQVSCGSVHVVALSEC 185
+ WG N G+N R G+ N +I +S G H +AL
Sbjct: 203 VCA-----WGANYSGQLGDGTNTDRSIPVQVKGIGGSGVLNNVIA-ISAGEFHSLALLND 256
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + AWG N+YGQLG G E P +KG + L + ++ G +HS A+
Sbjct: 257 GTVLAWGNNDYGQLGDGTNTES-NVPVQVKGTGGY----GVLNNVAAIAAGGFHSLALLN 311
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
+G V WG GQLG S D +P V L +A GG HS
Sbjct: 312 DGTVLAWGNNESGQLGDGSNSDSD---IPVTVSGLTN--SNTIAGGGDHS 356
>gi|145597074|ref|YP_001161371.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
gi|145306411|gb|ABP56993.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
Length = 477
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 153/393 (38%), Gaps = 69/393 (17%)
Query: 19 AKSAIYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAV 77
A + WG N G+ G + I LP A + IA GH+H+ AV
Sbjct: 70 ASDTVLAWGDNKDGELGDGTTTDSSTPIAVDLP---------AGTTITAIAAGHDHSLAV 120
Query: 78 ASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG 137
S GT WG N FGQLGDG+ P V V +I+ G + A+
Sbjct: 121 TSAGTALAWGNNLFGQLGDGSTTDSSTPIAVDLPAGTTVTAIAAGDDHSLAV-------- 172
Query: 138 TISTSRLWVWGQN------QGSNFPRLFWGAFTP-------NTIICQVSCGSVHVVALSE 184
S WG N G+ R TP T + ++ G H +AL+
Sbjct: 173 -TSAGTALAWGDNDRGELGDGTTTRR-----DTPVDVDLPAGTTVTAIAAGIGHSLALTS 226
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G + WG N GQLG G T + + P +T ++ G HS AV+
Sbjct: 227 AGTVLTWGLNSDGQLGDGTTTD---------SSTPIAVDLPAGTTVTAIAAGSLHSLAVT 277
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKEL---LP--RRVVALDGIFIKDVACGGVHSCALT 299
G + WG S GQLG + + + LP + A+DG G HS A+T
Sbjct: 278 TAGTILAWGNNSDGQLGDGTTTNSSTPIAVNLPASTTITAIDG--------GRDHSLAVT 329
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
S G+ AWG + GQLG G T N S N+P V G H+L
Sbjct: 330 SAGSALAWGDNDDGQLGDGTTT-------NSSTPIAVNLPADTT---VTATTAGSLHSLA 379
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVD 392
G I WG NS G+ + +T + P V+
Sbjct: 380 VTTAGTILAWGNNSDGRLGDGTTTNSSTPIAVN 412
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAA 128
G H+ AV + GT+ WG N G+LGDGT P V V + + G AH A
Sbjct: 373 GSLHSLAVTTAGTILAWGNNSDGRLGDGTTTNSSTPIAVNLPADTTVTATTAGSAHSMAL 432
Query: 129 IAEPRE 134
+A P +
Sbjct: 433 VAPPPD 438
>gi|340375548|ref|XP_003386296.1| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Amphimedon
queenslandica]
Length = 4694
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 171/363 (47%), Gaps = 46/363 (12%)
Query: 63 RWLDIACGHEHTAAVASDGTLFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISC 121
R LD+ H V F WG N+ QLG D +E K P + + L +
Sbjct: 2912 RRLDLLSTDTHGNKV------FVWGLNDMRQLGTDLSEAKVKSPIESRTLARLHPIQFAG 2965
Query: 122 GAHCTAAIAEPRENDGTI------STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCG 175
G+ C+ +++ DG + S+ RL + G P VSC
Sbjct: 2966 GSKCSFVVSD----DGKVFACGEGSSGRLGIGG-FANIRMPHQISSLSMYVVRKVAVSCA 3020
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
HV+A++ G + +WG +YGQLG G + + P++I+ + + + I +VSC
Sbjct: 3021 GRHVLAVTADGKVFSWGDGQYGQLGHG-SLQSYDRPKMIEIF--------QAKHIREVSC 3071
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
G HSAAVS NGE++TWG G+ G+LGH + K P+ V AL+ + I VACG ++
Sbjct: 3072 GTGHSAAVSVNGELFTWGQGADGRLGHGDSNNQTK---PKLVRALEKVRISCVACGSRNA 3128
Query: 296 CALTS-KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV--PNGVQLVAC 352
L + +L+AWG G+LGL + S ++P+ V+ P+ + + C
Sbjct: 3129 HTLAAGDNSLWAWGDGSFGKLGLKDGSSS------------TDVPVQVITFPSNIIQIEC 3176
Query: 353 GHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 411
G +++ ++G+++ WG Y + N+ ++ P+ VD + + ++A G H L
Sbjct: 3177 GMHFSVLLTKEGKVYTWGKGEYYRLGNDSTSVQPIPTLVDGLASKTITQVAVGALHCLAL 3236
Query: 412 ADA 414
+
Sbjct: 3237 TSS 3239
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 158/352 (44%), Gaps = 56/352 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ G SG+ G G +R+P Q+ + R + ++C H AV +DG
Sbjct: 2979 VFACGEGSSGRLGIGGFA-NIRMPHQI-----SSLSMYVVRKVAVSCAGRHVLAVTADGK 3032
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F+WG ++GQLG G+ + P+ ++ Q++ ++ +SCG +AA++ E
Sbjct: 3033 VFSWGDGQYGQLGHGSLQSYDRPKMIEIFQAKHIREVSCGTGHSAAVSVNGE-------- 3084
Query: 143 RLWVWGQ----------NQGSNFPRLFWGAFTPNTIICQVSCGS--VHVVALSECGLLQA 190
L+ WGQ + P+L A I C V+CGS H +A + L A
Sbjct: 3085 -LFTWGQGADGRLGHGDSNNQTKPKLV-RALEKVRISC-VACGSRNAHTLAAGDNSLW-A 3140
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +G+LG P + + I Q+ CG + S +++ G+VY
Sbjct: 3141 WGDGSFGKLGLKDGSSSTDVPVQVITFP---------SNIIQIECGMHFSVLLTKEGKVY 3191
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
TWG G +LG+ S + +P V L I VA G +H ALTS G +Y+WG +
Sbjct: 3192 TWGKGEYYRLGN---DSTSVQPIPTLVDGLASKTITQVAVGALHCLALTSSGEVYSWGDN 3248
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVY 360
+ GQ G N S R I+ G ++ +ACG SH++ +
Sbjct: 3249 EHGQQG------------NNSTICNRKPQIVASLKGHRICKIACGSSHSIAF 3288
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 134/295 (45%), Gaps = 38/295 (12%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y WG G+ G G + +P + + + +D CG H+A
Sbjct: 3938 VTTQGELYAWGEGEDGKLGL-GTTVNMNVPHLIE-------SLKSKHVIDAGCGSSHSAC 3989
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG+L+TWG +G+LG E + P+ V L+ E V ++CG+ +
Sbjct: 3990 ITDDGSLYTWGKGRYGRLGHNDHETQHKPKLVSALKGEQVTCVACGSGDAQTLC------ 4043
Query: 137 GTISTSRLWVWGQ----------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
++ ++ WG N+GS P+ + T +I ++ CGS +AL+ G
Sbjct: 4044 -ATASGCVFSWGDGDYGKLGRGGNEGSKVPKKI-DSLTGKHVI-KLLCGSQFSMALTTAG 4100
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ WG +Y +LG G + PR + G E + + CG H +E+
Sbjct: 4101 HVYTWGKGDYYRLGHGDDSHQ-RTPRRVLGLLAH-------ENVIDIGCGSLHCIVCTES 4152
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
G+V++WG GQ+G+ + Q+ +P+R+ D I I VACG HS A +SK
Sbjct: 4153 GKVFSWGDNDEGQIGNDTTQAVS---VPKRINITDNICIDHVACGSAHSIAWSSK 4204
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 142/305 (46%), Gaps = 57/305 (18%)
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
H A+ DG +++WG G LG G E + P V L + + IS G+ +AA+ E
Sbjct: 519 HILALTKDGKVYSWGQGSNGVLGIGNTESQTAPTAVAALSGDRIVHISAGSMHSAAVTE- 577
Query: 133 RENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGS--VHV 179
DG L+ WG+ ++ RL G P + I QV CGS H
Sbjct: 578 ---DGV-----LYTWGKG---SYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHT 626
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
+AL + G + +WG +YG+LGR G +V K + +P + ++ CG
Sbjct: 627 LALDDTGQVWSWGDGDYGKLGR----PGSDQNKVPKPISGIGSTSP----VVKIICGNQI 678
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCA 297
S A++++G++Y+WG G QLGH G++E + P+ + L + DV+ G H A
Sbjct: 679 SMALTKDGKLYSWGCGDTYQLGH-----GNQEHVRQPKLIEGLSETVVSDVSVGAQHCVA 733
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLVACGH 354
LT+ +YAWG + SF + NES + P+++ G L+ACG
Sbjct: 734 LTTDSDVYAWG-----------KNSSFEV--NESGDIISS-PLMIEAASGKGALLIACGA 779
Query: 355 SHTLV 359
S T V
Sbjct: 780 SETFV 784
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 171/409 (41%), Gaps = 67/409 (16%)
Query: 22 AIYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
+++ WG+NH GQ G G E +++ P+ C + + I G + AV D
Sbjct: 3835 SVFGWGHNHRGQLG--GIEGNKVKSPRL-------CESLSELNPAMITGGEQTLFAVTDD 3885
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSE--FVKSI---SCGAHCTAAIAEPREN 135
G ++ G G+LG G+ + P + L + VK I S G HC A +
Sbjct: 3886 GKVYASGYAAHGRLGIGSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQ---- 3941
Query: 136 DGTISTSRLWVWGQNQ----------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
L+ WG+ + N P L + + I CGS H +++
Sbjct: 3942 ------GELYAWGEGEDGKLGLGTTVNMNVPHLIESLKSKHVI--DAGCGSSHSACITDD 3993
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAV 243
G L WG YG+LG E P+++ A + E++T V+CG + +
Sbjct: 3994 GSLYTWGKGRYGRLGHN-DHETQHKPKLVS--------ALKGEQVTCVACGSGDAQTLCA 4044
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+ +G V++WG G G+LG G K +P+++ +L G + + CG S ALT+ G
Sbjct: 4045 TASGCVFSWGDGDYGKLGRGG-NEGSK--VPKKIDSLTGKHVIKLLCGSQFSMALTTAGH 4101
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 363
+Y WG +LG G + + R + L+ V + CG H +V
Sbjct: 4102 VYTWGKGDYYRLGHGDDSHQRTP---------RRVLGLLAHENVIDIGCGSLHCIVCTES 4152
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPV----DWCVGEVRKLAAGGGHS 408
G++ WG N GQ N+ + P + + C+ V A G HS
Sbjct: 4153 GKVFSWGDNDEGQIGNDTTQAVSVPKRINITDNICIDHV---ACGSAHS 4198
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 160/358 (44%), Gaps = 54/358 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y GY G+ G G + P P G + + I G +H AV + G
Sbjct: 3888 VYASGYAAHGRLG-IGSSDNVATPT---PLTSLATRGIAVKKIAIHSGGKHCLAVTTQGE 3943
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+ WG E G+LG GT P ++ L+S+ V CG+ +A I + DG+
Sbjct: 3944 LYAWGEGEDGKLGLGTTVNMNVPHLIESLKSKHVIDAGCGSSHSACITD----DGS---- 3995
Query: 143 RLWVWGQ----------NQGSNFPRLFWGAFTPNTIICQVSCGS--VHVVALSECGLLQA 190
L+ WG+ ++ + P+L A + C V+CGS + + G + +
Sbjct: 3996 -LYTWGKGRYGRLGHNDHETQHKPKLV-SALKGEQVTC-VACGSGDAQTLCATASGCVFS 4052
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +YG+LGRG EG + P+ I + + ++ CG S A++ G VY
Sbjct: 4053 WGDGDYGKLGRG-GNEGSKVPKKIDSLTG--------KHVIKLLCGSQFSMALTTAGHVY 4103
Query: 251 TWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDG-IFIKDVACGGVHSCALTSKGALYAW 307
TWG G +LGH GD + PRRV+ L + D+ CG +H T G +++W
Sbjct: 4104 TWGKGDYYRLGH-----GDDSHQRTPRRVLGLLAHENVIDIGCGSLHCIVCTESGKVFSW 4158
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
G + GQ+G T++ S +P + NI I VACG +H++ + R
Sbjct: 4159 GDNDEGQIG-NDTTQAVS-VPKRINIT-DNICI-------DHVACGSAHSIAWSSKQR 4206
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 139/328 (42%), Gaps = 37/328 (11%)
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
T S ++F WG N GQLG K P + L I+ G A+ +
Sbjct: 3827 TLPTGSTFSVFGWGHNHRGQLGGIEGNKVKSPRLCESLSELNPAMITGGEQTLFAVTD-- 3884
Query: 134 ENDGTISTS------RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSC--GSVHVVALSEC 185
DG + S RL + G + P T + +++ G H +A++
Sbjct: 3885 --DGKVYASGYAAHGRLGI-GSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQ 3941
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G L AWG E G+LG G T + P +I E+ + + + CG HSA +++
Sbjct: 3942 GELYAWGEGEDGKLGLGTTV-NMNVPHLI--------ESLKSKHVIDAGCGSSHSACITD 3992
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGA 303
+G +YTWG G G+LGH ++ K P+ V AL G + VACG + T+ G
Sbjct: 3993 DGSLYTWGKGRYGRLGHNDHETQHK---PKLVSALKGEQVTCVACGSGDAQTLCATASGC 4049
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 363
+++WG G+LG G NE + I L + ++L+ CG ++
Sbjct: 4050 VFSWGDGDYGKLGRG---------GNEGSKVPKKIDSLTGKHVIKLL-CGSQFSMALTTA 4099
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPV 391
G ++ WG Y + + ++ P V
Sbjct: 4100 GHVYTWGKGDYYRLGHGDDSHQRTPRRV 4127
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 98/195 (50%), Gaps = 23/195 (11%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H++AL++ G + +WG G LG G T E P + + ++I +S G
Sbjct: 519 HILALTKDGKVYSWGQGSNGVLGIGNT-ESQTAPTAVAALSG--------DRIVHISAGS 569
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHS 295
HSAAV+E+G +YTWG GS G+LGH + + +L+P V L+G+ I V CG H+
Sbjct: 570 MHSAAVTEDGVLYTWGKGSYGRLGHGN---AEDKLIPTIVEGLNGVKIVQVDCGSGDAHT 626
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS 355
AL G +++WG G+LG ++ +P P++ + CG+
Sbjct: 627 LALDDTGQVWSWGDGDYGKLGRPGSDQN--KVPKPISGIGSTSPVVKI-------ICGNQ 677
Query: 356 HTLVYMRDGRIHGWG 370
++ +DG+++ WG
Sbjct: 678 ISMALTKDGKLYSWG 692
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 128/289 (44%), Gaps = 39/289 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG +G G E Q P +G R + I+ G H+AAV DG
Sbjct: 529 VYSWGQGSNGVLGIGNTE------SQTAPTAVAALSG--DRIVHISAGSMHSAAVTEDGV 580
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG G E + P V+ L + + CG+ +A T
Sbjct: 581 LYTWGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHTLA-------LDDTG 633
Query: 143 RLWVWGQ----------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
++W WG + + P+ G + + ++ ++ CG+ +AL++ G L +WG
Sbjct: 634 QVWSWGDGDYGKLGRPGSDQNKVPKPISGIGSTSPVV-KIICGNQISMALTKDGKLYSWG 692
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
+ QLG G E ++ P++I+G ++ + ++ VS G H A++ + +VY W
Sbjct: 693 CGDTYQLGHG-NQEHVRQPKLIEGLSETV--------VSDVSVGAQHCVALTTDSDVYAW 743
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
G S ++ +SGD P + A G +ACG + SK
Sbjct: 744 GKNSSFEVN----ESGDIISSPLMIEAASGKGALLIACGASETFVSFSK 788
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 111/241 (46%), Gaps = 36/241 (14%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG+N GQLG GI ++ PR+ + ++ P + ++ GE AV+++G+VY
Sbjct: 3839 WGHNHRGQLG-GIEGNKVKSPRLCESLSEL---NPAM-----ITGGEQTLFAVTDDGKVY 3889
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVAL--DGIFIKDVAC--GGVHSCALTSKGALYA 306
G + G+LG + S D P + +L GI +K +A GG H A+T++G LYA
Sbjct: 3890 ASGYAAHGRLG---IGSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELYA 3946
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV---ACGHSHTLVYMRD 363
WG + G+LGLG T N+P L+ + V CG SH+ D
Sbjct: 3947 WGEGEDGKLGLGT-------------TVNMNVPHLIESLKSKHVIDAGCGSSHSACITDD 3993
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADACSLKELCE 422
G ++ WG YG+ + P V GE V +A G G + L C+ C
Sbjct: 3994 GSLYTWGKGRYGRLGHNDHETQHKPKLVSALKGEQVTCVACGSGDAQTL---CATASGCV 4050
Query: 423 F 423
F
Sbjct: 4051 F 4051
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 77/158 (48%), Gaps = 21/158 (13%)
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
H A++++G+VY+WG GS G LG + + + + P V AL G I ++ G +HS A+
Sbjct: 519 HILALTKDGKVYSWGQGSNGVLG---IGNTESQTAPTAVAALSGDRIVHISAGSMHSAAV 575
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV-PNGVQLVAC----G 353
T G LY WG G+LG G N D + IP +V NGV++V G
Sbjct: 576 TEDGVLYTWGKGSYGRLGHG----------NAED---KLIPTIVEGLNGVKIVQVDCGSG 622
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
+HTL G++ WG YG+ S P P+
Sbjct: 623 DAHTLALDDTGQVWSWGDGDYGKLGRPGSDQNKVPKPI 660
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 31/185 (16%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
++++ WG G+ G K +P Q+ P S + I CG + + +
Sbjct: 3136 NSLWAWGDGSFGKLGLKDGSSSTDVPVQV----ITFP----SNIIQIECGMHFSVLLTKE 3187
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTI 139
G ++TWG E+ +LG+ + + P V L S+ + ++ GA HC A
Sbjct: 3188 GKVYTWGKGEYYRLGNDSTSVQPIPTLVDGLASKTITQVAVGALHCLA----------LT 3237
Query: 140 STSRLWVWGQN----QGSNF------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQ 189
S+ ++ WG N QG+N P++ A IC+++CGS H +A ++ L
Sbjct: 3238 SSGEVYSWGDNEHGQQGNNSTICNRKPQIV--ASLKGHRICKIACGSSHSIAFAQGSLTT 3295
Query: 190 AWGYN 194
A ++
Sbjct: 3296 AVKFS 3300
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG + G G + R P+++ G A N +DI CG H G
Sbjct: 4102 VYTWGKGDYYRLGH-GDDSHQRTPRRV----LGLLAHENV--IDIGCGSLHCIVCTESGK 4154
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
+F+WG N+ GQ+G+ T + P+++ + + ++CG+ + A + + N
Sbjct: 4155 VFSWGDNDEGQIGNDTTQAVSVPKRINITDNICIDHVACGSAHSIAWSSKQRN 4207
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 53/122 (43%), Gaps = 11/122 (9%)
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVA 351
G H ALT G +Y+WG G LG+G ES T + L V ++
Sbjct: 517 GNHILALTKDGKVYSWGQGSNGVLGIG---------NTESQTAPTAVAALSGDRIVH-IS 566
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAV 410
G H+ DG ++ WG SYG+ + + P+ V+ G ++ ++ G G +
Sbjct: 567 AGSMHSAAVTEDGVLYTWGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHT 626
Query: 411 LA 412
LA
Sbjct: 627 LA 628
>gi|111220973|ref|YP_711767.1| BNR repeat-containing protein [Frankia alni ACN14a]
gi|111148505|emb|CAJ60176.1| BNR repeat domain protein (partial) [Frankia alni ACN14a]
Length = 385
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 121/404 (29%), Positives = 174/404 (43%), Gaps = 70/404 (17%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFT 85
WG+N G G +L P ++ G G +A G H+ + SDGT++T
Sbjct: 15 WGFNPDGALGDGSTTTRL-----TPVQVVGLTDGVT----QVAAGGYHSVVLRSDGTVWT 65
Query: 86 WGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLW 145
G N G+LGDGT R+ P V L + I+ +H T A+ +DGT+ W
Sbjct: 66 SGLNLNGELGDGTTTDRRTPGPVSGLTG--ITQIAANSHFTLAL----RSDGTV-----W 114
Query: 146 VWGQNQ----GSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECGLLQAWGYNEY 196
WG N G R G TP + I QV G+ H +AL G + AWG NE+
Sbjct: 115 AWGANSYGQLGDGSTR---GRNTPVQVSGLAGITQVDAGAAHGLALRNDGTVWAWGDNEF 171
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQ+G G T P + G L +TQ++ G HS V +G V+ WGL
Sbjct: 172 GQVGDGSTTS-RSTPTQVSG----------LTGVTQIAAGGGHSLVVRGDGAVWGWGLNR 220
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL-----TSKGALYAWGGSQ 311
GQLG + + + R L G + +A G HS AL S G ++AWG +
Sbjct: 221 NGQLGDGTTRDSTTAV---RAAGLTG--VARIAAGETHSLALLGGAGLSSGQVFAWGDNS 275
Query: 312 AGQLGLGPQTRSFSLIP---------NESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
+GQ LG +TR+ + P + + + P V +A G+ H+L +
Sbjct: 276 SGQ--LGDRTRTDRVTPVRIPGLPPAGATTSAAQGSGAAQGPRSVTQIATGNLHSLALLS 333
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVD-WCVGEVRKLAAGG 405
DG + WG G T SPV + VR+++ GG
Sbjct: 334 DGTVWAWGRYPLGDG-----TETTRESPVKVLALSGVRQVSGGG 372
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 103/223 (46%), Gaps = 30/223 (13%)
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
AWG+N G LG G T L +V+ + +TQV+ G YHS + +G V
Sbjct: 14 AWGFNPDGALGDGSTTTRLTPVQVVG----------LTDGVTQVAAGGYHSVVLRSDGTV 63
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
+T GL G+LG + D+ P V L GI +A + AL S G ++AWG
Sbjct: 64 WTSGLNLNGELGDGTTT--DRRT-PGPVSGLTGI--TQIAANSHFTLALRSDGTVWAWGA 118
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHG 368
+ GQLG + T RN P+ V G+ V G +H L DG +
Sbjct: 119 NSYGQLG-------------DGSTRGRNTPVQVSGLAGITQVDAGAAHGLALRNDGTVWA 165
Query: 369 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
WG N +GQ + +T P+ V G V ++AAGGGHS V+
Sbjct: 166 WGDNEFGQVGDGSTTSRSTPTQVSGLTG-VTQIAAGGGHSLVV 207
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 58/118 (49%), Gaps = 18/118 (15%)
Query: 23 IYVWGYNHSGQTG---RKGRERQLRIPKQLPP--------ELFGCPAGANSRWLDIACGH 71
++ WG N SGQ G R R +RIP LPP + G G S IA G+
Sbjct: 268 VFAWGDNSSGQLGDRTRTDRVTPVRIPG-LPPAGATTSAAQGSGAAQGPRSV-TQIATGN 325
Query: 72 EHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAI 129
H+ A+ SDGT++ WG LGDGTE R+ P KV L V+ +S G + A+
Sbjct: 326 LHSLALLSDGTVWAWGRYP---LGDGTETTRESPVKVLALSG--VRQVSGGGFFSMAV 378
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 81/227 (35%), Gaps = 65/227 (28%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAV---- 77
A++ WG N +GQ G G R + L G IA G H+ A+
Sbjct: 212 AVWGWGLNRNGQLG-DGTTRDSTTAVR-AAGLTGVA--------RIAAGETHSLALLGGA 261
Query: 78 -ASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
S G +F WG N GQLGD T R P ++ L + + A + A PR
Sbjct: 262 GLSSGQVFAWGDNSSGQLGDRTRTDRVTPVRIPGLPP--AGATTSAAQGSGAAQGPRS-- 317
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
+ Q++ G++H +AL G + AWG
Sbjct: 318 --------------------------------VTQIATGNLHSLALLSDGTVWAWGRYPL 345
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
G +G + R + K L L + QVS G + S AV
Sbjct: 346 G--------DGTETTR--ESPVKVL----ALSGVRQVSGGGFFSMAV 378
>gi|159037340|ref|YP_001536593.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
gi|157916175|gb|ABV97602.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
Length = 563
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 118/419 (28%), Positives = 166/419 (39%), Gaps = 70/419 (16%)
Query: 24 YVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACG-HEHTAAVASDG 81
WG+N GQ G R + LP A++ IA G + H+ AV S
Sbjct: 63 LAWGFNALGQLGDGTTTNRNTPVTVDLP---------ADTTITAIAAGVNGHSLAVTSAS 113
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
T+ WG N +GQLGDGT R P V + +I+ G + A+ S
Sbjct: 114 TMLAWGFNTWGQLGDGTTTNRNTPVAVDLPTGTTITAIAAGKSHSLAV---------TSA 164
Query: 142 SRLWVWGQNQGS----------NFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
+ WG N N P T I ++ G+ H +AL+ G + AW
Sbjct: 165 GTMLAWGLNSAGQLGDGTTTNRNTPVAV--DLPTGTTITAIAAGNGHSLALTSAGTMLAW 222
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G N +GQLG G T P + + P IT ++ G HS AV+ G +
Sbjct: 223 GENTWGQLGDGTTTN-RNTPVTV--------DLPTGTTITALAGGGGHSLAVTSTGTMLA 273
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALD----GIFIKDVACGGVHSCALTSKGALYAW 307
WG GQLG + + + VA+D GG HS A TS G + AW
Sbjct: 274 WGFNFWGQLGDGTTTNRNTP------VAVDLPTGTTITAIAGGGGGHSLAATSTGTMLAW 327
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQLVAC----GHSHTLVYMR 362
G + GQLG + T R+ P+ V +P G + A G H+L
Sbjct: 328 GLNSFGQLG-------------DGTTSNRSTPVTVDLPAGTTITAIAAGGGSGHSLAATS 374
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSLKEL 420
G + WG N+ GQ + ++ P VD G + + AGG HS + + S L
Sbjct: 375 TGTMLAWGANTLGQLGDGTTSNRSTPVTVDLPAGTTITAVTAGGFHSLAIVPSTSTTTL 433
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 147/362 (40%), Gaps = 50/362 (13%)
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTAAIAEP 132
AA + GT WG N GQLGDGT R P V + +I+ G H A +
Sbjct: 54 AAAGTPGTGLAWGFNALGQLGDGTTTNRNTPVTVDLPADTTITAIAAGVNGHSLAVTSA- 112
Query: 133 RENDGTISTSRLW---VWGQ-----NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
ST W WGQ N P T I ++ G H +A++
Sbjct: 113 -------STMLAWGFNTWGQLGDGTTTNRNTPVAV--DLPTGTTITAIAAGKSHSLAVTS 163
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G + AWG N GQLG G T P + + P IT ++ G HS A++
Sbjct: 164 AGTMLAWGLNSAGQLGDGTTTN-RNTPVAV--------DLPTGTTITAIAAGNGHSLALT 214
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
G + WG + GQLG + + + P V G I +A GG HS A+TS G +
Sbjct: 215 SAGTMLAWGENTWGQLGDGTTTNRNT---PVTVDLPTGTTITALAGGGGHSLAVTSTGTM 271
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VP---NGVQLVACGHSHTLVY 360
AWG + GQLG G T RN P+ V +P + G H+L
Sbjct: 272 LAWGFNFWGQLGDGTTTN-------------RNTPVAVDLPTGTTITAIAGGGGGHSLAA 318
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSLKE 419
G + WG NS+GQ + ++ P VD G + +AAGGG LA +
Sbjct: 319 TSTGTMLAWGLNSFGQLGDGTTSNRSTPVTVDLPAGTTITAIAAGGGSGHSLAATSTGTM 378
Query: 420 LC 421
L
Sbjct: 379 LA 380
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 142/367 (38%), Gaps = 72/367 (19%)
Query: 17 IPAKSAIYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTA 75
+ + S + WG+N GQ G R + LP + IA G H+
Sbjct: 109 VTSASTMLAWGFNTWGQLGDGTTTNRNTPVAVDLP---------TGTTITAIAAGKSHSL 159
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
AV S GT+ WG N GQLGDGT R P V + +I+ G + A+
Sbjct: 160 AVTSAGTMLAWGLNSAGQLGDGTTTNRNTPVAVDLPTGTTITAIAAGNGHSLAL------ 213
Query: 136 DGTISTSRLWVWGQNQGSNFPRLFWGAF---------TPNTI-------ICQVSCGSVHV 179
S + WG+N WG TP T+ I ++ G H
Sbjct: 214 ---TSAGTMLAWGENT--------WGQLGDGTTTNRNTPVTVDLPTGTTITALAGGGGHS 262
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
+A++ G + AWG+N +GQLG G T + +D G H
Sbjct: 263 LAVTSTGTMLAWGFNFWGQLGDGTTTN--------RNTPVAVDLPTGTTITAIAGGGGGH 314
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCA 297
S A + G + WGL S GQLG + P V G I +A GG HS A
Sbjct: 315 SLAATSTGTMLAWGLNSFGQLGDGTTS---NRSTPVTVDLPAGTTITAIAAGGGSGHSLA 371
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQL--VACGH 354
TS G + AWG + GQLG + T R+ P+ V +P G + V G
Sbjct: 372 ATSTGTMLAWGANTLGQLG-------------DGTTSNRSTPVTVDLPAGTTITAVTAGG 418
Query: 355 SHTLVYM 361
H+L +
Sbjct: 419 FHSLAIV 425
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 119/275 (43%), Gaps = 41/275 (14%)
Query: 159 FWGAFTPNTIICQV----SCGSVHVVALS-------ECGLLQAWGYNEYGQLGRGITCEG 207
WG F ++ V S G+ V+A S G AWG+N GQLG G T
Sbjct: 22 LWGLFAVPLMVAVVLGITSVGAARVLAQSVPSAAAGTPGTGLAWGFNALGQLGDGTTTN- 80
Query: 208 LQGPRVIKGYAKFLDEAPELEKITQVSCG-EYHSAAVSENGEVYTWGLGSVGQLGHCSLQ 266
P + + P IT ++ G HS AV+ + WG + GQLG +
Sbjct: 81 RNTPVTV--------DLPADTTITAIAAGVNGHSLAVTSASTMLAWGFNTWGQLGDGTTT 132
Query: 267 SGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSL 326
+ + P V G I +A G HS A+TS G + AWG + AGQLG G T
Sbjct: 133 NRNT---PVAVDLPTGTTITAIAAGKSHSLAVTSAGTMLAWGLNSAGQLGDGTTTN---- 185
Query: 327 IPNESDTYFRNIPILV-VPNGVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKST 383
RN P+ V +P G + +A G+ H+L G + WG N++GQ + +T
Sbjct: 186 ---------RNTPVAVDLPTGTTITAIAAGNGHSLALTSAGTMLAWGENTWGQLGDGTTT 236
Query: 384 YAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
P VD G + LA GGGHS + ++
Sbjct: 237 NRNTPVTVDLPTGTTITALAGGGGHSLAVTSTGTM 271
>gi|255551398|ref|XP_002516745.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223544118|gb|EEF45643.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 393
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 155/356 (43%), Gaps = 46/356 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N G G + IP Q+ A N + A G H AV G
Sbjct: 59 LFTWGWNQRGTLGHPAETKTENIPSQVK-------ALNNVNIVQAAIGGWHCLAVDDQGR 111
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ WG NE+GQ G EE + + K L+ + V C + T
Sbjct: 112 AYAWGGNEYGQCG---EEPERKDDTGKTLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTR 168
Query: 143 R--LWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
+W WGQ + + P G + ++ G+ H +AL E G L AWG N
Sbjct: 169 EGHVWTWGQPWPPGDIKQISVPVRVQGLEK----VKLIAVGAFHNLALQEDGTLWAWGNN 224
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
EYGQLG G T Q P ++G + + ++ G +HS A++++GEVY WG
Sbjct: 225 EYGQLGTGDTQPRSQ-PIPVQGLSGL--------TLVDIAAGGWHSTALTDDGEVYGWGR 275
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
G G+LG K ++P++V L G I ++CGG HS ALT G ++++G G+
Sbjct: 276 GEHGRLGFGDNDKSSK-MVPQKVNLLAGEDIVQLSCGGTHSVALTQDGRMFSFGRGDHGR 334
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ---------LVACGHSHTLVYM 361
LG G + + + +D IP +G + LVACG HTL +
Sbjct: 335 LGYGKKVTTGQPVEVPTD-----IPPPKSLSGTEEAEGHWIAKLVACGGRHTLAIV 385
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 150/347 (43%), Gaps = 62/347 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKH-PEKVKQLQS-EFVKSISCGAH 124
+ G ++ A+ DG LFTWG N+ G LG E ++ P +VK L + V++ G H
Sbjct: 43 VVAGSRNSLAICDDGKLFTWGWNQRGTLGHPAETKTENIPSQVKALNNVNIVQAAIGGWH 102
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQ--------------GSNFPR--LFWGAFTPNTI 168
C A + R + WG N+ G R + P +
Sbjct: 103 CLAVDDQ----------GRAYAWGGNEYGQCGEEPERKDDTGKTLRRDIVIPQRCAPKLV 152
Query: 169 ICQVSCGSVHVVALSECGLLQAWGY----NEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
+ QV+ G H V L+ G + WG + Q+ + +GL
Sbjct: 153 VRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGL---------------- 196
Query: 225 PELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF 284
EK+ ++ G +H+ A+ E+G ++ WG GQLG Q + P V L G+
Sbjct: 197 ---EKVKLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQ---PIPVQGLSGLT 250
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP 344
+ D+A GG HS ALT G +Y WG + G+LG G +S ++P + + +L
Sbjct: 251 LVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVP-------QKVNLLAGE 303
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
+ VQL +CG +H++ +DGR+ +G +G+ K P V
Sbjct: 304 DIVQL-SCGGTHSVALTQDGRMFSFGRGDHGRLGYGKKVTTGQPVEV 349
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 20/123 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G ++ ++ P+ AG + + ++CG H+ A+ DG
Sbjct: 270 VYGWGRGEHGRLGFGDNDKS----SKMVPQKVNLLAGEDI--VQLSCGGTHSVALTQDGR 323
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKV-------KQLQSE-------FVKSISCGAHCTAA 128
+F++G + G+LG G + P +V K L K ++CG T A
Sbjct: 324 MFSFGRGDHGRLGYGKKVTTGQPVEVPTDIPPPKSLSGTEEAEGHWIAKLVACGGRHTLA 383
Query: 129 IAE 131
I E
Sbjct: 384 IVE 386
>gi|408501214|ref|YP_006865133.1| RCC1-like protein [Bifidobacterium asteroides PRL2011]
gi|408466038|gb|AFU71567.1| RCC1-like protein [Bifidobacterium asteroides PRL2011]
Length = 1086
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 111/353 (31%), Positives = 149/353 (42%), Gaps = 47/353 (13%)
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKH-PEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
AV SDG + WG N +GQLGDGT ++ P +VK + + A R
Sbjct: 572 AVGSDGNAYAWGDNTYGQLGDGTANNSRYTPIRVKTPDRKTYPDLPADFTYVQVSAGGRH 631
Query: 135 NDGTISTSRLWVWGQ----------NQGSNFPRLFWGAFTPNT-----IICQVSCGSVHV 179
+ S + WG S P +P QVS G H
Sbjct: 632 SLAVGSDGYAYAWGNNNNGQLGNNTKTNSYVPVRIRDPGSPTDESRGLKAIQVSAGYWHS 691
Query: 180 VALSECGLLQAWGYNEYGQLGRGIT--CEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
+ALS G AWGY+ YGQLG + E P +++ DE+ L+ I QVS G
Sbjct: 692 LALSNDGYAYAWGYDWYGQLGNNTSGSSEYSPFPILVRNPDSPTDESMGLKTI-QVSAGN 750
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCS--LQSGDKELLPRRVV-------ALDGIFIKDV 288
HS A+ NG VY WG S GQLG + + P RV G+ +
Sbjct: 751 LHSLALDSNGYVYAWGWNSYGQLGDNTNDISEDSHSAFPVRVRDPANPSETNMGLKAIQI 810
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV------ 342
+ G HS A+ S G YAWG + GQLG + S+S P +P+ V
Sbjct: 811 SAGYDHSMAVGSDGYAYAWGWNVKGQLGNNTISDSYSGNP---------VPVHVRDPANP 861
Query: 343 --VPNGVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
G++ V+ G+ H+L DG +GWGYN YGQ N T ++ P PV
Sbjct: 862 TDTSKGLKATQVSAGYWHSLAVGSDGYAYGWGYNWYGQLGNNTKTDSYVPVPV 914
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 98/260 (37%), Gaps = 51/260 (19%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELF--GCPAGANS--RWLDIACGHEHTAAVA 78
+Y WG+N GQ G + P + P+ N + + I+ G++H+ AV
Sbjct: 762 VYAWGWNSYGQLGDNTNDISEDSHSAFPVRVRDPANPSETNMGLKAIQISAGYDHSMAVG 821
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
SDG + WG N GQLG+ T + G + +P T
Sbjct: 822 SDGYAYAWGWNVKGQLGNNT-----------------ISDSYSGNPVPVHVRDPANPTDT 864
Query: 139 ISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQ 198
+ QVS G H +A+ G WGYN YGQ
Sbjct: 865 SKGLK-------------------------ATQVSAGYWHSLAVGSDGYAYGWGYNWYGQ 899
Query: 199 LGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVG 258
LG + P ++ A D L K TQ+S G +HS AV G VY WG G
Sbjct: 900 LGNNTKTDSYV-PVPVRDPANPTDTNKGL-KATQISSGYWHSMAVGSEGYVYAWGNNGNG 957
Query: 259 QLGHCSLQSGDKELLPRRVV 278
+LG + + +L P VV
Sbjct: 958 RLGDGTT---NGKLAPVSVV 974
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 90/226 (39%), Gaps = 32/226 (14%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP-RVIKGYAKFLDEAPEL 227
I + GS + A+ G AWG N YGQLG G P RV K + P
Sbjct: 561 ISSSNTGSFSL-AVGSDGNAYAWGDNTYGQLGDGTANNSRYTPIRVKTPDRKTYPDLPAD 619
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV----VALD-- 281
QVS G HS AV +G Y W G + +P R+ D
Sbjct: 620 FTYVQVSAGGRHSLAVGSDGYAYAW---GNNNNGQLGNNTKTNSYVPVRIRDPGSPTDES 676
Query: 282 -GIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI 340
G+ V+ G HS AL++ G YAWG GQLG + + PI
Sbjct: 677 RGLKAIQVSAGYWHSLALSNDGYAYAWGYDWYGQLGNN----------TSGSSEYSPFPI 726
Query: 341 LV----VPNGVQL------VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
LV P + V+ G+ H+L +G ++ WG+NSYGQ
Sbjct: 727 LVRNPDSPTDESMGLKTIQVSAGNLHSLALDSNGYVYAWGWNSYGQ 772
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 93/210 (44%), Gaps = 34/210 (16%)
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFI 285
+ +I+ + G + S AV +G Y WG + GQLG + + + P RV D
Sbjct: 557 KFNQISSSNTGSF-SLAVGSDGNAYAWGDNTYGQLGDGT--ANNSRYTPIRVKTPDRKTY 613
Query: 286 KD---------VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLI----PNESD 332
D V+ GG HS A+ S G YAWG + GQLG +T S+ + P
Sbjct: 614 PDLPADFTYVQVSAGGRHSLAVGSDGYAYAWGNNNNGQLGNNTKTNSYVPVRIRDPGSPT 673
Query: 333 TYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANE---KSTYAWYP- 388
R + + V+ G+ H+L DG + WGY+ YGQ N S Y+ +P
Sbjct: 674 DESRGLKAI-------QVSAGYWHSLALSNDGYAYAWGYDWYGQLGNNTSGSSEYSPFPI 726
Query: 389 ------SPVDWCVG-EVRKLAAGGGHSAVL 411
SP D +G + +++AG HS L
Sbjct: 727 LVRNPDSPTDESMGLKTIQVSAGNLHSLAL 756
>gi|440230900|ref|YP_007344693.1| RCC1 domain-containing protein, alpha-tubulin suppressor [Serratia
marcescens FGI94]
gi|440052605|gb|AGB82508.1| RCC1 domain-containing protein, alpha-tubulin suppressor [Serratia
marcescens FGI94]
Length = 1812
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 162/391 (41%), Gaps = 51/391 (13%)
Query: 20 KSAIYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
K I+ WG+N G G R+R + L P G+ + G + A+
Sbjct: 1446 KDRIWSWGFNRDGMLGDGTNRDRTRPVLTDLTPL-----GGSTVVSISTGSGASRSQAID 1500
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
G L+ WG N G LGDGT R P V S G+ A+A R ++
Sbjct: 1501 DQGRLWAWGYNFAGALGDGTGIDRNRPV--------LVDLASLGSSKVTAVAAGRYHNLV 1552
Query: 139 IS-TSRLWVWGQN----------QGSNFPRLFWGAFTP--NTIICQVSCGSVHVVALSEC 185
+ SRLW WG N +P P + + V G H + L +
Sbjct: 1553 LDDQSRLWAWGHNGDGQLGDGTRTNVAYPLPIQVDLEPLAGSTVTGVWAGDFHSIILDDL 1612
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAP-ELEKITQVSCGEYHSAAVS 244
G L WG N+YG+LG G T + +D P K+ VS GE+H+ A+
Sbjct: 1613 GRLWVWGKNKYGELGDGTTT--------YQTRPVLVDLLPLNGRKVMAVSAGEHHTVALD 1664
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
E G ++ WGL G+LG S + + + +LDG + ++ GG ++ AL G L
Sbjct: 1665 EQGGLWAWGLNDSGRLGDGSTTDRHRP-VQVDLTSLDGHKVVAISAGGWNTVALDELGRL 1723
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRD 363
+AWG +++G LG G R + + + P NG ++VA ++ D
Sbjct: 1724 WAWGPNESGLLGDGTTINQ-----------HRPVQVDLTPLNGRKVVAVSAGSFYFFVVD 1772
Query: 364 --GRIHGWGYNSYGQAANEKSTYAWYPSPVD 392
G + WG NSYGQ + T P VD
Sbjct: 1773 DRGELWAWGSNSYGQLGDGTKTRRLKPVRVD 1803
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 140/329 (42%), Gaps = 51/329 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTA 75
I + ++ WGYN +G G G +R P L + +S+ +A G H
Sbjct: 1499 IDDQGRLWAWGYNFAGALGDGTGIDRNR-------PVLVDLASLGSSKVTAVAAGRYHNL 1551
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
+ L+ WG N GQLGDGT +P + Q+ E + G+ T A +
Sbjct: 1552 VLDDQSRLWAWGHNGDGQLGDGTRTNVAYPLPI-QVDLEPL----AGSTVTGVWAGDFHS 1606
Query: 136 DGTISTSRLWVWGQNQGSNFPRLFWGAFTPNT-------------IICQVSCGSVHVVAL 182
RLWVWG+N+ + L G T T + VS G H VAL
Sbjct: 1607 IILDDLGRLWVWGKNK---YGELGDGTTTYQTRPVLVDLLPLNGRKVMAVSAGEHHTVAL 1663
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
E G L AWG N+ G+LG G T + R ++ LD K+ +S G +++ A
Sbjct: 1664 DEQGGLWAWGLNDSGRLGDGSTTD---RHRPVQVDLTSLDG----HKVVAISAGGWNTVA 1716
Query: 243 VSENGEVYTWGLGSVGQLG-------HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
+ E G ++ WG G LG H +Q L R+VVA V+ G +
Sbjct: 1717 LDELGRLWAWGPNESGLLGDGTTINQHRPVQVDLTPLNGRKVVA--------VSAGSFYF 1768
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSF 324
+ +G L+AWG + GQLG G +TR
Sbjct: 1769 FVVDDRGELWAWGSNSYGQLGDGTKTRRL 1797
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 118/285 (41%), Gaps = 27/285 (9%)
Query: 140 STSRLWVWGQNQGSNFPRLFWGA-----FTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
ST + +W + S F G FT +++ GS+H + L + +WG+N
Sbjct: 1396 STGAVQLWATDPLSGFASQLLGEQYLSCFTVTGDKNRMAAGSLHSLILDNKDRIWSWGFN 1455
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC----GEYHSAAVSENGEVY 250
G LG G + + L + L T VS G S A+ + G ++
Sbjct: 1456 RDGMLGDGTNRDRTR---------PVLTDLTPLGGSTVVSISTGSGASRSQAIDDQGRLW 1506
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
WG G LG + ++ +L + +L + VA G H+ L + L+AWG +
Sbjct: 1507 AWGYNFAGALGDGTGIDRNRPVL-VDLASLGSSKVTAVAAGRYHNLVLDDQSRLWAWGHN 1565
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWG 370
GQLG G +T +P + D P+ + V V G H+++ GR+ WG
Sbjct: 1566 GDGQLGDGTRTNVAYPLPIQVDLE----PL--AGSTVTGVWAGDFHSIILDDLGRLWVWG 1619
Query: 371 YNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA--GGGHSAVLAD 413
N YG+ + +TY P VD RK+ A G H V D
Sbjct: 1620 KNKYGELGDGTTTYQTRPVLVDLLPLNGRKVMAVSAGEHHTVALD 1664
>gi|348688463|gb|EGZ28277.1| hypothetical protein PHYSODRAFT_309181 [Phytophthora sojae]
Length = 4167
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 149/318 (46%), Gaps = 35/318 (11%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A++ G N SGQ G E ++ I + +G + A G EH AVASDG
Sbjct: 522 AVFTCGLNKSGQCGNGTFEERVIIATPV-----RALSGIVINMVAAANGCEHMLAVASDG 576
Query: 82 TLFTWGANEFGQLGDGTEEGRKH-PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+++WG N+ GQLG G+ + H P + L+ ++ H T A + S
Sbjct: 577 AVYSWGYNDRGQLGLGSTISKSHTPRMIDSLREKY--------HITTAAVSYHHSAVVSS 628
Query: 141 TSRLWVWGQN----------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
L ++G N Q + P+L + +I +V+CG H +A++ G + +
Sbjct: 629 NGELLMFGMNDCGQLGLDHTQHQHTPQLVDS--LSSQVITEVACGLYHTIAITSGGEVYS 686
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
+G N+YGQLG G ++ P ++K D EKI VSCG YH+ +SE G++
Sbjct: 687 FGKNDYGQLGLG-HARNMKVPTLVKTSLGESD-----EKIVAVSCGYYHTVTISEKGKLI 740
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
TWG GQLG + S D + + V IK +CG H+ L S G + +G +
Sbjct: 741 TWGRNDYGQLG---IGSKDHKNSAQYVPLPLSSKIKTASCGCYHTLILMSNGRVMVFGRN 797
Query: 311 QAGQLGLGPQTRSFSLIP 328
GQLG G +T + +P
Sbjct: 798 NKGQLGAGSRTLPSADLP 815
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 108/361 (29%), Positives = 166/361 (45%), Gaps = 54/361 (14%)
Query: 72 EHTAAVAS--DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAI 129
E +VAS D LF+ G N +G+L G E V ++ ++ I+ G A +
Sbjct: 458 ERLLSVASFDDCELFSCGQNNYGELCLGHCNSTSKLEHVPFFSAKAIRDIAGGNEVLAVV 517
Query: 130 AEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTP-----NTIICQVSC--GSVHVVAL 182
+ DG + T L GQ F A TP +I V+ G H++A+
Sbjct: 518 MK----DGAVFTCGLNKSGQCGNGTFEERVIIA-TPVRALSGIVINMVAAANGCEHMLAV 572
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
+ G + +WGYN+ GQLG G T PR+I D E IT + +HSA
Sbjct: 573 ASDGAVYSWGYNDRGQLGLGSTISKSHTPRMI-------DSLREKYHITTAAVSYHHSAV 625
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VS NGE+ +G+ GQLG L + P+ V +L I +VACG H+ A+TS G
Sbjct: 626 VSSNGELLMFGMNDCGQLG---LDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAITSGG 682
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRN--IPILVVPN------GVQLVACGH 354
+Y++G + GQLGLG + RN +P LV + + V+CG+
Sbjct: 683 EVYSFGKNDYGQLGLG---------------HARNMKVPTLVKTSLGESDEKIVAVSCGY 727
Query: 355 SHTLVYMRDGRIHGWGYNSYGQ----AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAV 410
HT+ G++ WG N YGQ + + K++ + P P+ +++ + G H+ +
Sbjct: 728 YHTVTISEKGKLITWGRNDYGQLGIGSKDHKNSAQYVPLPLS---SKIKTASCGCYHTLI 784
Query: 411 L 411
L
Sbjct: 785 L 785
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 118/420 (28%), Positives = 179/420 (42%), Gaps = 68/420 (16%)
Query: 31 SGQTGRKGRERQLRIPKQLPPELFGC----------------------PAGANSRWLDIA 68
SGQ GR ER L + ELF C P + DIA
Sbjct: 451 SGQAGRT--ERLLSVASFDDCELFSCGQNNYGELCLGHCNSTSKLEHVPFFSAKAIRDIA 508
Query: 69 CGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRK-HPEKVKQLQSEFVKSISCGAHCTA 127
G+E A V DG +FT G N+ GQ G+GT E R V+ L + ++ C
Sbjct: 509 GGNEVLAVVMKDGAVFTCGLNKSGQCGNGTFEERVIIATPVRALSGIVINMVAAANGCEH 568
Query: 128 AIAEPRENDGTISTSRLWVWGQNQ-----------GSNFPRLFWGAFTPNTIICQVSCGS 176
+A +DG + + WG N S+ PR+ + I +
Sbjct: 569 MLAV--ASDGAV-----YSWGYNDRGQLGLGSTISKSHTPRMI-DSLREKYHITTAAVSY 620
Query: 177 VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG 236
H +S G L +G N+ GQLG T + P+++ + + IT+V+CG
Sbjct: 621 HHSAVVSSNGELLMFGMNDCGQLGLDHT-QHQHTPQLVDSLSS--------QVITEVACG 671
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSC 296
YH+ A++ GEVY++G GQLG ++ L + + I V+CG H+
Sbjct: 672 LYHTIAITSGGEVYSFGKNDYGQLGLGHARNMKVPTLVKTSLGESDEKIVAVSCGYYHTV 731
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
++ KG L WG + GQLG+G + S + +P L + + ++ +CG H
Sbjct: 732 TISEKGKLITWGRNDYGQLGIGSKDHKNSA---------QYVP-LPLSSKIKTASCGCYH 781
Query: 357 TLVYMRDGRIHGWGYNSYGQ--AANEKSTYAWYPSPV---DWCVGEVRKLAAGGGHSAVL 411
TL+ M +GR+ +G N+ GQ A + A P PV EV ++AAG S +L
Sbjct: 782 TLILMSNGRVMVFGRNNKGQLGAGSRTLPSADLPLPVPSNSLANDEVVRIAAGFYSSYIL 841
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 133/301 (44%), Gaps = 44/301 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPP--ELFGCPAGANSRWLDIACGHEHT 74
+ + A+Y WGYN GQ G + P+ + E + A S + H+
Sbjct: 572 VASDGAVYSWGYNDRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVS--------YHHS 623
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
A V+S+G L +G N+ GQLG + + P+ V L S+ + ++CG + T AI
Sbjct: 624 AVVSSNGELLMFGMNDCGQLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAIT---- 679
Query: 135 NDGTISTSRLWVWGQN----------QGSNFPRLFWGAF-TPNTIICQVSCGSVHVVALS 183
S ++ +G+N + P L + + I VSCG H V +S
Sbjct: 680 -----SGGEVYSFGKNDYGQLGLGHARNMKVPTLVKTSLGESDEKIVAVSCGYYHTVTIS 734
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
E G L WG N+YGQLG G + K A+++ P KI SCG YH+ +
Sbjct: 735 EKGKLITWGRNDYGQLG--------IGSKDHKNSAQYV-PLPLSSKIKTASCGCYHTLIL 785
Query: 244 SENGEVYTWGLGSVGQLGHCS--LQSGDKEL-LPRRVVALDGIFIKDVACGGVHSCALTS 300
NG V +G + GQLG S L S D L +P +A D + +A G S LT
Sbjct: 786 MSNGRVMVFGRNNKGQLGAGSRTLPSADLPLPVPSNSLANDEVV--RIAAGFYSSYILTG 843
Query: 301 K 301
+
Sbjct: 844 R 844
>gi|428177727|gb|EKX46605.1| hypothetical protein GUITHDRAFT_48927, partial [Guillardia theta
CCMP2712]
Length = 316
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 156/355 (43%), Gaps = 46/355 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG S G + P+ L + G R D+ACG H+A V G
Sbjct: 1 VYFWGQAGSA----VGEQVSSSTPRMLKKAM-----GRQVR--DVACGLVHSAMVMGSGE 49
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ WG N++GQ G GT+E +HP V L S+SCG T ++E DG + +
Sbjct: 50 VLCWGENKYGQCGTGTQEQTEHPTFVGSLFGVACMSVSCGGAHTVVVSE----DGRVFSW 105
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYNE 195
L GQ + L TP+ + + V+CG H V + G L G+N+
Sbjct: 106 GLGANGQLGHGSRDNL----TTPSVVQAMRGRDVLAVTCGVGHTVIVLAGGELYTCGWNK 161
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
GQ G G T + L P+ + E+ E + SCG H+A V+ GEV+T+G G
Sbjct: 162 NGQCGVGSTSD-LLSPQCV--------ESLRGEGVQHASCGAGHTAVVTGGGEVFTFGSG 212
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
S GQLGH Q +PRRV AL GI + VACG ++ ++ +G + GQL
Sbjct: 213 SCGQLGHGDCQDLS---MPRRVGALVGIVMSMVACGEEYTVCAAFDHRVFGFGLNNVGQL 269
Query: 316 GLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWG 370
G + + P + + + V+L C S + R G + WG
Sbjct: 270 GASSTSHPYLSEPRQME--------FLKEEEVELCKCNQSEVIALTRRGALRAWG 316
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 114/265 (43%), Gaps = 24/265 (9%)
Query: 148 GQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEG 207
G+ S+ PR+ A + V+CG VH + G + WG N+YGQ G G T E
Sbjct: 12 GEQVSSSTPRMLKKAMGRQ--VRDVACGLVHSAMVMGSGEVLCWGENKYGQCGTG-TQEQ 68
Query: 208 LQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQS 267
+ P + VSCG H+ VSE+G V++WGLG+ GQLGH S
Sbjct: 69 TEHPTFVGSLFGV--------ACMSVSCGGAHTVVVSEDGRVFSWGLGANGQLGH---GS 117
Query: 268 GDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLI 327
D P V A+ G + V CG H+ + + G LY G ++ GQ G+G + S
Sbjct: 118 RDNLTTPSVVQAMRGRDVLAVTCGVGHTVIVLAGGELYTCGWNKNGQCGVGSTSDLLSPQ 177
Query: 328 PNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWY 387
ES + GVQ +CG HT V G + +G S GQ +
Sbjct: 178 CVES----------LRGEGVQHASCGAGHTAVVTGGGEVFTFGSGSCGQLGHGDCQDLSM 227
Query: 388 PSPVDWCVGEVRKLAAGGGHSAVLA 412
P V VG V + A G V A
Sbjct: 228 PRRVGALVGIVMSMVACGEEYTVCA 252
>gi|224127630|ref|XP_002329325.1| predicted protein [Populus trichocarpa]
gi|222870779|gb|EEF07910.1| predicted protein [Populus trichocarpa]
Length = 392
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 154/358 (43%), Gaps = 51/358 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N G G + IP Q+ A AN + A G H AV G
Sbjct: 59 LFTWGWNQRGTLGHPPETKTENIPSQVK-------ALANVNIVQAAIGGWHCLAVDDQGR 111
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ WG NE+GQ G EE + + + L+ + V C + + T
Sbjct: 112 AYAWGGNEYGQCG---EEPERKDDTGRPLRRDIVIPQRCASKLVVRQVAAGGTHSVVLTR 168
Query: 143 R--LWVWGQNQGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECGLLQAWGYNE 195
+W WGQ P P + + ++ G+ H +AL E G L AWG NE
Sbjct: 169 EGHVWSWGQPW---PPGDIKQISVPVRVQGLERVRLIAVGAFHNLALQEDGTLWAWGNNE 225
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
YGQLG G T Q P ++G + + ++ G +HS A++++GEVY WG G
Sbjct: 226 YGQLGTGDTQPRSQ-PITVQGLSGL--------TLVDIAAGGWHSTALTDDGEVYGWGRG 276
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
G+LG K ++P+RV L G I V+CGG HS ALT G +Y +G G+L
Sbjct: 277 EHGRLGFGDNDKSSK-MVPQRVNLLVGEDIVQVSCGGTHSVALTRDGRMYTFGRGDHGRL 335
Query: 316 GLGPQTRSFSLIPNESDTYFRNIPILVVPNG------------VQLVACGHSHTLVYM 361
G G + + P E +PI + P +LVA G HTL +
Sbjct: 336 GYGRKVTTGQ--PME-------VPIDIPPPKNLTDSGDAGRWIAKLVASGGRHTLAIV 384
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 169/402 (42%), Gaps = 76/402 (18%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQ--LRIPKQLPPELFGCPAGANSRWLDIACGHEHT 74
+ +S++ WG GQ G E + + I K L P + G ++
Sbjct: 1 MATESSVIAWGSGEDGQLGIGNNEEKEWVCIVKALEPYKV----------RSVVAGSRNS 50
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKH-PEKVKQLQS-EFVKSISCGAHCTAAIAEP 132
A+ DG LFTWG N+ G LG E ++ P +VK L + V++ G HC A +
Sbjct: 51 LAICDDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALANVNIVQAAIGGWHCLAVDDQ- 109
Query: 133 RENDGTISTSRLWVWGQNQ----GSNFPR-------LFWGAFTP-----NTIICQVSCGS 176
R + WG N+ G R L P ++ QV+ G
Sbjct: 110 ---------GRAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCASKLVVRQVAAGG 160
Query: 177 VHVVALSECGLLQAWGY----NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
H V L+ G + +WG + Q+ + +G LE++
Sbjct: 161 THSVVLTREGHVWSWGQPWPPGDIKQISVPVRVQG-------------------LERVRL 201
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
++ G +H+ A+ E+G ++ WG GQLG Q + P V L G+ + D+A GG
Sbjct: 202 IAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQ---PITVQGLSGLTLVDIAAGG 258
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVAC 352
HS ALT G +Y WG + G+LG G +S ++P + L+V + V+C
Sbjct: 259 WHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQRVN--------LLVGEDIVQVSC 310
Query: 353 GHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPS--PVD 392
G +H++ RDGR++ +G +G+ + P P+D
Sbjct: 311 GGTHSVALTRDGRMYTFGRGDHGRLGYGRKVTTGQPMEVPID 352
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 101/252 (40%), Gaps = 32/252 (12%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ V GS + +A+ + G L WG+N+ G LG + P +K A
Sbjct: 40 VRSVVAGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALANV-------- 91
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL-----DGI 283
I Q + G +H AV + G Y WG GQ G + D RR + + +
Sbjct: 92 NIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCASKL 151
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
++ VA GG HS LT +G +++WG D ++P+ V
Sbjct: 152 VVRQVAAGGTHSVVLTREGHVWSWGQPWP-----------------PGDIKQISVPVRVQ 194
Query: 344 P-NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKL 401
V+L+A G H L DG + WG N YGQ + P V G + +
Sbjct: 195 GLERVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPITVQGLSGLTLVDI 254
Query: 402 AAGGGHSAVLAD 413
AAGG HS L D
Sbjct: 255 AAGGWHSTALTD 266
>gi|19112818|ref|NP_596026.1| Ran GDP/GTP exchange factor [Schizosaccharomyces pombe 972h-]
gi|12644186|sp|P28745.2|RCC1_SCHPO RecName: Full=Protein pim1; AltName: Full=Poly(A)+ RNA transport
protein 2
gi|6434004|emb|CAB60670.1| Ran GDP/GTP exchange factor [Schizosaccharomyces pombe]
Length = 539
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 119/444 (26%), Positives = 195/444 (43%), Gaps = 70/444 (15%)
Query: 10 TARPVDNIPA----KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+A+ ++ IP + +YV+G + G E + +L P L G +
Sbjct: 56 SAKRINKIPELPTERLNVYVFGSGSMNELGMGEEEMDVVYRPRLNPILSTDKVGV----V 111
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKH-------------PEKVKQLQ 112
D+A G H+AA++ DG ++TWG N+ LG T++ + P KV+
Sbjct: 112 DLAVGGMHSAALSHDGRVYTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGAL 171
Query: 113 SEF-VKSISCGAHCTAAIAEP---------RENDGTISTSRLWVWGQNQGSNFPRLFWGA 162
S V + C + TAAI + R +DG + S Q + + ++
Sbjct: 172 SHLRVTKVICSDNLTAAITDNGCCFTWGTFRCSDGVLGYSD----SQKRTAEPTQMRLPE 227
Query: 163 FTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG-ITCEGLQGPRVIKGYAKFL 221
ICQ++ G+ H++AL+ G + WG + QLGR + LQG
Sbjct: 228 ------ICQLATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQG---------LT 272
Query: 222 DEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE-----LLPRR 276
+ L+ I V G YHS A+ G VY WGL Q C ++ D+E P
Sbjct: 273 PQPLALKNIISVGAGSYHSFAIDNKGRVYAWGLNITRQ---CGIEVEDEEEGAVITKPTL 329
Query: 277 VVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNES-DTYF 335
V AL+G +K + G H+ AL G + AWG QLG+ +++ +E + Y+
Sbjct: 330 VDALEGYNVKSITGGEHHTLALLEDGRVLAWGRDDRHQLGIPDNALPETVVKDEKGNNYY 389
Query: 336 RNIPILV--VPNGVQLVACGHSHTLVYMRDGRIHGWGYN---SYGQAANEKSTYAWYPSP 390
+ P ++ + N +Q+V CG H L DG+++ WG GQ N++ P+
Sbjct: 390 LSTPTIIPGLTNVIQVV-CGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDEDVAV--PTL 446
Query: 391 V-DWCVGEVR-KLAAGGGHSAVLA 412
V + EV ++A GG +++A
Sbjct: 447 VRSKAIKEVAIRVAGAGGQFSIIA 470
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 18/111 (16%)
Query: 208 LQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQS 267
L P + G AK +++ PEL +E VY +G GS+ +LG +
Sbjct: 47 LPKPVRVPGSAKRINKIPELP---------------TERLNVYVFGSGSMNELGMGE-EE 90
Query: 268 GDKELLPRR--VVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
D PR +++ D + + D+A GG+HS AL+ G +Y WG + LG
Sbjct: 91 MDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRVYTWGVNDDYALG 141
>gi|326913438|ref|XP_003203045.1| PREDICTED: hypothetical protein LOC100541592 [Meleagris gallopavo]
Length = 1302
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 180/388 (46%), Gaps = 49/388 (12%)
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
N + + I+CG EHTA V +G L+ +G+N++GQLG G++ P VK L+ E K
Sbjct: 51 NDKPVHISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVHKPTCVKALKPEKTKLAV 110
Query: 121 CGAHCTAAIAEPRENDGTISTS------RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSC 174
CG + T E +G + + +L + + + F + + FT I Q++
Sbjct: 111 CGRNHTLVYTE----NGNMYAAGGNGEGQLGLGDTEERTTFHLISF--FTNQHKIKQLAA 164
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
GS A++E G L WG N GQ+G K Y + + I+ +S
Sbjct: 165 GSYTSAAVTEDGQLFVWGDNSEGQIGLA-----------DKTYVSVPCQVDVGKPISSIS 213
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF--IKDVACGG 292
CG YHSA ++ +GE+YT+G G+LG Q + +P+ V+ GI + VACGG
Sbjct: 214 CGYYHSAFITGDGELYTFGEPENGKLGLLPEQLKNSR-VPQPVL---GIMEKVNKVACGG 269
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVAC 352
H+ LT G +Y +G Q GQLG G T F +S + R I + + C
Sbjct: 270 EHTVVLTETG-VYTFGLGQYGQLGHG--TLLFKTSVPKSVKHLRKCKI-------RNITC 319
Query: 353 GHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV---DWCVGEVRKLAAGGGHSA 409
G SHT V +G + +G +G+ + +A P ++ V +A GG H
Sbjct: 320 GESHTAVIAENGLMFTFGDGRHGKLGLGEENFANQFDPALCSNFLSFTVLLVACGGCHML 379
Query: 410 VLA-------DACSLKELCEFRLAESVT 430
V A + L++L E RL +++
Sbjct: 380 VFATPRPKESEEILLEDLYESRLISTIS 407
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 89/190 (46%), Gaps = 30/190 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++VWG N GQ G + + +P Q+ G P + I+CG+ H+A + DG
Sbjct: 178 LFVWGDNSEGQIGLADK-TYVSVPCQVD---VGKPISS------ISCGYYHSAFITGDGE 227
Query: 83 LFTWGANEFGQLGDGTEEGR--KHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
L+T+G E G+LG E+ + + P+ V + E V ++CG T + E +
Sbjct: 228 LYTFGEPENGKLGLLPEQLKNSRVPQPVLGIM-EKVNKVACGGEHTVVLTET-----GVY 281
Query: 141 TSRLWVWGQ-NQGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWG 192
T L +GQ G+ L + P ++ I ++CG H ++E GL+ +G
Sbjct: 282 TFGLGQYGQLGHGT----LLFKTSVPKSVKHLRKCKIRNITCGESHTAVIAENGLMFTFG 337
Query: 193 YNEYGQLGRG 202
+G+LG G
Sbjct: 338 DGRHGKLGLG 347
>gi|403331454|gb|EJY64675.1| putative protein similar to vertebrate hect domain and RLD 3 (HERC3)
[Oxytricha trifallax]
Length = 2049
Score = 125 bits (315), Expect = 4e-26, Method: Composition-based stats.
Identities = 112/385 (29%), Positives = 164/385 (42%), Gaps = 71/385 (18%)
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
++ CG+ HT + G +F WGAN+ GQLG G + Q+ +S G
Sbjct: 1637 EVCCGNSHTMVINMSGQVFVWGANQTGQLGLG--------DNSPQI-------LSAGYEH 1681
Query: 126 TAAIAEPRENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSV 177
+ AI + E L++WG + N P + F + I+ V CG +
Sbjct: 1682 SIAITKSNE---------LYIWGSGGLCGIGTLKQQNAP-VKIDFFNKSKILTAV-CGGL 1730
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGIT-----CEGLQG--PRVIKGYAKFLDEAPELE-- 228
H VA+++ +WG E GQLG + C+G QG P+V+ P+LE
Sbjct: 1731 HTVAVTKDWEAYSWGLTEGGQLGLPQSTIVKLCQG-QGDEPQVLTP-----QRIPKLEGL 1784
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHC----SLQSG-----DKELLPRRVVA 279
+I QV+CGE HS A++++G +Y WG + GQLG S + G K P+ +
Sbjct: 1785 QIAQVACGEAHSIAMTKDGTIYGWGQSNYGQLGLGFSGDSFEPGLGMEKSKVYEPQEING 1844
Query: 280 LDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNE--------- 330
L I + CG + T KG LY G + GQLGL + E
Sbjct: 1845 LKHEKISKIICGATFTLFQTDKGDLYGCGVNDLGQLGLDTFMEEMQIASLEKVKKGKHNQ 1904
Query: 331 -SDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG--RIHGWGYNSYGQAANEKSTYAWY 387
SD I + +ACG SH+L DG + WG GQ + T
Sbjct: 1905 TSDVILPTRVICFQGIAIHQIACGESHSLAVSGDGMNMLWAWGMFKNGQLGLGEVTMKLN 1964
Query: 388 PSPV-DWCVGEVRKLAAGGGHSAVL 411
P PV C +++++A G HS L
Sbjct: 1965 PRPVQSLCSSQIQRIACGSMHSVAL 1989
Score = 118 bits (295), Expect = 7e-24, Method: Composition-based stats.
Identities = 97/319 (30%), Positives = 140/319 (43%), Gaps = 50/319 (15%)
Query: 81 GTLFTWGANEFGQLG-DGTEEGRKH-----------PEKVKQLQSEFVKSISCGAHCTAA 128
G LF+ G + GQLG D + +H P + L+ E ++ + CG T
Sbjct: 1588 GILFSMGTDNNGQLGLDVLSQDDQHSSHTPSIKVLYPRMIISLKDEVIREVCCGNSHTMV 1647
Query: 129 IAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
I + +++VWG NQ +L G +P + S G H +A+++ L
Sbjct: 1648 IN---------MSGQVFVWGANQTG---QLGLGDNSPQIL----SAGYEHSIAITKSNEL 1691
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG G G G T + P I + K KI CG H+ AV+++ E
Sbjct: 1692 YIWGSG--GLCGIG-TLKQQNAPVKIDFFNK--------SKILTAVCGGLHTVAVTKDWE 1740
Query: 249 VYTWGLGSVGQLGH--------CSLQSGDKELL-PRRVVALDGIFIKDVACGGVHSCALT 299
Y+WGL GQLG C Q + ++L P+R+ L+G+ I VACG HS A+T
Sbjct: 1741 AYSWGLTEGGQLGLPQSTIVKLCQGQGDEPQVLTPQRIPKLEGLQIAQVACGEAHSIAMT 1800
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFS--LIPNESDTYFRNIPILVVPNGVQLVACGHSHT 357
G +Y WG S GQLGLG SF L +S Y + + + CG + T
Sbjct: 1801 KDGTIYGWGQSNYGQLGLGFSGDSFEPGLGMEKSKVYEPQEINGLKHEKISKIICGATFT 1860
Query: 358 LVYMRDGRIHGWGYNSYGQ 376
L G ++G G N GQ
Sbjct: 1861 LFQTDKGDLYGCGVNDLGQ 1879
Score = 95.9 bits (237), Expect = 4e-17, Method: Composition-based stats.
Identities = 65/236 (27%), Positives = 107/236 (45%), Gaps = 51/236 (21%)
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQ----GPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
CG+L + G + GQLG + + Q P + Y + + + E I +V CG H+
Sbjct: 1587 CGILFSMGTDNNGQLGLDVLSQDDQHSSHTPSIKVLYPRMIISLKD-EVIREVCCGNSHT 1645
Query: 241 AAVSENGEVYTWGLGSVGQLG--------------H------------------CSLQSG 268
++ +G+V+ WG GQLG H C + +
Sbjct: 1646 MVINMSGQVFVWGANQTGQLGLGDNSPQILSAGYEHSIAITKSNELYIWGSGGLCGIGTL 1705
Query: 269 DKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIP 328
++ P ++ + I CGG+H+ A+T Y+WG ++ GQLGL PQ+ L
Sbjct: 1706 KQQNAPVKIDFFNKSKILTAVCGGLHTVAVTKDWEAYSWGLTEGGQLGL-PQSTIVKLCQ 1764
Query: 329 NESDTYFRNIPILVVPN------GVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+ D P ++ P G+Q+ VACG +H++ +DG I+GWG ++YGQ
Sbjct: 1765 GQGDE-----PQVLTPQRIPKLEGLQIAQVACGEAHSIAMTKDGTIYGWGQSNYGQ 1815
Score = 94.7 bits (234), Expect = 9e-17, Method: Composition-based stats.
Identities = 99/362 (27%), Positives = 150/362 (41%), Gaps = 93/362 (25%)
Query: 23 IYVWGYNHSGQTG---------RKGRERQLRIPKQLPPELFG----CPAGA--------- 60
++VWG N +GQ G G E + I K ++G C G
Sbjct: 1654 VFVWGANQTGQLGLGDNSPQILSAGYEHSIAITKSNELYIWGSGGLCGIGTLKQQNAPVK 1713
Query: 61 -----NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQL------------GDGTEEGRK 103
S+ L CG HT AV D ++WG E GQL G G E
Sbjct: 1714 IDFFNKSKILTAVCGGLHTVAVTKDWEAYSWGLTEGGQLGLPQSTIVKLCQGQGDEPQVL 1773
Query: 104 HPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG-- 161
P+++ +L+ + ++CG + A+ + DGTI + WGQ SN+ +L G
Sbjct: 1774 TPQRIPKLEGLQIAQVACGEAHSIAMTK----DGTI-----YGWGQ---SNYGQLGLGFS 1821
Query: 162 --------------AFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYNEYGQLG 200
+ P I I ++ CG+ + ++ G L G N+ GQLG
Sbjct: 1822 GDSFEPGLGMEKSKVYEPQEINGLKHEKISKIICGATFTLFQTDKGDLYGCGVNDLGQLG 1881
Query: 201 RGITCEGLQGP---RVIKGYAKFLDEAPELEK--------ITQVSCGEYHSAAVSENG-- 247
E +Q +V KG + + I Q++CGE HS AVS +G
Sbjct: 1882 LDTFMEEMQIASLEKVKKGKHNQTSDVILPTRVICFQGIAIHQIACGESHSLAVSGDGMN 1941
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL---TSKGAL 304
++ WG+ GQLG L +L PR V +L I+ +ACG +HS AL T++ ++
Sbjct: 1942 MLWAWGMFKNGQLG---LGEVTMKLNPRPVQSLCSSQIQRIACGSMHSVALIGDTNQISI 1998
Query: 305 YA 306
Y+
Sbjct: 1999 YS 2000
>gi|146298949|ref|YP_001193540.1| regulator of chromosome condensation, RCC1 [Flavobacterium
johnsoniae UW101]
gi|146153367|gb|ABQ04221.1| regulator of chromosome condensation, RCC1 [Flavobacterium
johnsoniae UW101]
Length = 1679
Score = 125 bits (315), Expect = 4e-26, Method: Composition-based stats.
Identities = 108/383 (28%), Positives = 170/383 (44%), Gaps = 57/383 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G + IP ++ G + W A G HT A+ +DGT
Sbjct: 40 LWTWGNNDEGQLG-NSTPAAINIPTKM---------GTANNWKTAAAGWGHTVALKTDGT 89
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+ WG GQLG+G + + ++++ ++I+ G T A+ +NDGT
Sbjct: 90 LWAWGYGRLGQLGNGNYNTNFNLPQQIGTENDW-QTIAAGHGHTVAL----KNDGT---- 140
Query: 143 RLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
LW WG N G++F R ++ +S G ++ +AL + G L AWG N Y
Sbjct: 141 -LWAWGNNFSGQLGNGTSFDRNTPTKIGSDSNWLAISAGGLYTIALKKDGTLWAWGKNTY 199
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
G LG G T RV K D ++ G H+ A+ +G ++ WG +
Sbjct: 200 GTLGDGTTTNN----RVPKQIGTDTD-------WKTIAAGSDHTIAIKNDGSLWIWGKNT 248
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV-HSCALTSKGALYAWGGSQAGQL 315
G LG + +++P + + D + A GGV ++ A+ + G L+AWG + G
Sbjct: 249 YGALGD---NTTIDKIVPTK-IGTDTDW--KSAEGGVDYTVAIKTDGTLWAWGYNADGVF 302
Query: 316 GLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
G G + SLIP + T Q+V+ G HT+ D + WG NSYG
Sbjct: 303 GNGSKIN--SLIPVQIGT----------EKNWQMVSGGSVHTVAVKTDESLWSWGNNSYG 350
Query: 376 QAANEKSTYAWYPSPVDWCVGEV 398
Q + S P+ ++ C G +
Sbjct: 351 QLGDGTSIEKNIPTLLN-CAGSL 372
Score = 120 bits (300), Expect = 2e-24, Method: Composition-based stats.
Identities = 110/404 (27%), Positives = 166/404 (41%), Gaps = 68/404 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WGY GQ G +P+Q+ G + W IA GH HT A+ +DGT
Sbjct: 90 LWAWGYGRLGQLGNGNYNTNFNLPQQI---------GTENDWQTIAAGHGHTVALKNDGT 140
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+ WG N GQLG+GT R P K+ S ++ +IS G T A+ + DGT
Sbjct: 141 LWAWGNNFSGQLGNGTSFDRNTPTKIGS-DSNWL-AISAGGLYTIAL----KKDGT---- 190
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQ---------VSCGSVHVVALSECGLLQAWGY 193
LW WG+N + L G T N + Q ++ GS H +A+ G L WG
Sbjct: 191 -LWAWGKN---TYGTLGDGTTTNNRVPKQIGTDTDWKTIAAGSDHTIAIKNDGSLWIWGK 246
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
N YG LG T + + P I + G ++ A+ +G ++ WG
Sbjct: 247 NTYGALGDNTTIDKIV-PTKIGTDTDW----------KSAEGGVDYTVAIKTDGTLWAWG 295
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
+ G G+ S L+P ++ + V+ G VH+ A+ + +L++WG + G
Sbjct: 296 YNADGVFGN---GSKINSLIPVQIGTEKN--WQMVSGGSVHTVAVKTDESLWSWGNNSYG 350
Query: 314 QLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNS 373
QLG G +NIP L+ G +V ++ G G +
Sbjct: 351 QLGDGTSIE-------------KNIPTLLNCAGSLIVTVSQTNVRC---AGSNEGSASIT 394
Query: 374 YGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSL 417
TY W + E+ A G +S + DA SL
Sbjct: 395 SVSGGTTPYTYLWSNGKTTASITEL----AAGDYSCTITDASSL 434
Score = 60.8 bits (146), Expect = 2e-06, Method: Composition-based stats.
Identities = 40/141 (28%), Positives = 60/141 (42%), Gaps = 14/141 (9%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I ++ WGYN G G + L IP Q+ G W ++ G HT A
Sbjct: 285 IKTDGTLWAWGYNADGVFGNGSKINSL-IPVQI---------GTEKNWQMVSGGSVHTVA 334
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFV----KSISCGAHCTAAIAEP 132
V +D +L++WG N +GQLGDGT + P + S V ++ C + +
Sbjct: 335 VKTDESLWSWGNNSYGQLGDGTSIEKNIPTLLNCAGSLIVTVSQTNVRCAGSNEGSASIT 394
Query: 133 RENDGTISTSRLWVWGQNQGS 153
+ GT + LW G+ S
Sbjct: 395 SVSGGTTPYTYLWSNGKTTAS 415
>gi|405354387|ref|ZP_11023754.1| RCC1 repeat domain protein [Chondromyces apiculatus DSM 436]
gi|397092349|gb|EJJ23118.1| RCC1 repeat domain protein [Myxococcus sp. (contaminant ex DSM
436)]
Length = 837
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 159/361 (44%), Gaps = 53/361 (14%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++ WG +S G + P Q PEL G A +A +EH+ AV DG
Sbjct: 505 SLRTWGSGYSDVLGDGTTYSKDAAPVQ-APELSGVKA--------VAAAYEHSVAVRGDG 555
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
T+++WG N+ QLGDGT P +V L +++ G A DGT+
Sbjct: 556 TVWSWGLNQDDQLGDGTFRPSSVPVQV--LGITGATAVAAGGDTLLAFTVALREDGTV-- 611
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG N W + T + + ++ G++H VAL + G + +WG N
Sbjct: 612 ---WSWGNNYFGMLGHPAWPSTTQGAVQVPGLMDVTAIAAGNLHAVALRKNGSVWSWGRN 668
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
GQLG G + P ++ EL + ++ G + A+ ++G V+ WG
Sbjct: 669 SAGQLGDGTNIQ-RDSPVPLR----------ELANVKAITAGRDFAVALHDDGTVWAWGA 717
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + LP++V L G+ D G H+ AL + G ++AWG + GQ
Sbjct: 718 NDSGQLGDGTFAT---RPLPQQVQGLTGVVAVD--AGDDHTLALRNDGTVWAWGNNDLGQ 772
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LG G TR+ P + + + V VA G ++V + +G + GWG +Y
Sbjct: 773 LGDG--TRTTQPTPVQMQGFRK----------VSAVAAGFISSVVLLENGTVWGWG--AY 818
Query: 375 G 375
G
Sbjct: 819 G 819
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 117/404 (28%), Positives = 169/404 (41%), Gaps = 66/404 (16%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+++ WG N+ GQ G R + P L G G ++ G H + DG
Sbjct: 455 SVWAWGSNYYGQLGDGSRRS-----RSTPVRLAGLTEGKT-----VSVGSWHAVLLRQDG 504
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+L TWG+ LGDGT K V+ + VK+++ + A+ DGT+
Sbjct: 505 SLRTWGSGYSDVLGDGTTY-SKDAAPVQAPELSGVKAVAAAYEHSVAV----RGDGTV-- 557
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPNTIICQV--SCGSVHV-----------VALSECGLL 188
W WG NQ G F P+++ QV G+ V VAL E G +
Sbjct: 558 ---WSWGLNQDDQLGD---GTFRPSSVPVQVLGITGATAVAAGGDTLLAFTVALREDGTV 611
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG N +G LG QG + P L +T ++ G H+ A+ +NG
Sbjct: 612 WSWGNNYFGMLGHPAWPSTTQGAV----------QVPGLMDVTAIAAGNLHAVALRKNGS 661
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
V++WG S GQLG + D + P R +A +K + G + AL G ++AWG
Sbjct: 662 VWSWGRNSAGQLGDGTNIQRDSPV-PLRELA----NVKAITAGRDFAVALHDDGTVWAWG 716
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHG 368
+ +GQLG G T + +P + GV V G HTL DG +
Sbjct: 717 ANDSGQLGDG--TFATRPLPQQVQGL----------TGVVAVDAGDDHTLALRNDGTVWA 764
Query: 369 WGYNSYGQAANEKSTYAWYPSPVDW-CVGEVRKLAAGGGHSAVL 411
WG N GQ + T P+PV +V +AAG S VL
Sbjct: 765 WGNNDLGQLGDGTRTT--QPTPVQMQGFRKVSAVAAGFISSVVL 806
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 110/379 (29%), Positives = 165/379 (43%), Gaps = 67/379 (17%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+I+ WG N + Q G P Q+P L G A IA G HT A+ DG
Sbjct: 210 SIWTWGSNAASQLGADISAGSRVTPMQVP-GLTGATA--------IAVGDSHTVALLKDG 260
Query: 82 TLFTWGANEFGQLGDGTEEGRKH-PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+++TWG N GQLGD E + H P +V L S V +I+ G T A+ DGT+
Sbjct: 261 SVWTWGDNRSGQLGDAGRESQNHIPAQVPGLAS--VVAIAAGGSRTVAV----RQDGTV- 313
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGY 193
W WG Q + F P + + HVV L G + WG+
Sbjct: 314 ----WTWGTKQSNRQD------FNPTPVQVPGLTDVIAADASDNHVVVLRTDGTV--WGW 361
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
LG G T + L P + P+L +S G+ H+ A+ +G V+ WG
Sbjct: 362 GRANLLG-GSTQDWLTMPV----------QVPDLADCKALSAGDEHTVALRADGTVWVWG 410
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
GQLG+ + S K + + ++A +K VA G + A+ G+++AWG + G
Sbjct: 411 TDDFGQLGNGGVPSDAKPVQAQGLMA-----VKAVAAGNDWTVAIGEDGSVWAWGSNYYG 465
Query: 314 QLGLGPQTRSFSLIPNESDTYFRNIPI-LVVPNGVQLVACGHSHTLVYMRDGRIHGWGYN 372
QLG G + RS R+ P+ L + V+ G H ++ +DG + WG +
Sbjct: 466 QLGDGSR-RS------------RSTPVRLAGLTEGKTVSVGSWHAVLLRQDGSLRTWG-S 511
Query: 373 SYGQAANEKSTYAWYPSPV 391
Y + +TY+ +PV
Sbjct: 512 GYSDVLGDGTTYSKDAAPV 530
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 92/193 (47%), Gaps = 30/193 (15%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H + ++E +QAWG NE QLGRG R + G L +T V
Sbjct: 155 HALVVTEQQKVQAWGNNESTQLGRGEPQY-----RTVSG----------LTGVTAVKSRL 199
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
H AA+ E+G ++TWG + QLG + +G + + P +V L G +A G H+ A
Sbjct: 200 AHVAALKEDGSIWTWGSNAASQLG-ADISAGSR-VTPMQVPGLTG--ATAIAVGDSHTVA 255
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT 357
L G+++ WG +++GQLG + S + IP + +P L V +A G S T
Sbjct: 256 LLKDGSVWTWGDNRSGQLGDAGR-ESQNHIPAQ-------VPGLA---SVVAIAAGGSRT 304
Query: 358 LVYMRDGRIHGWG 370
+ +DG + WG
Sbjct: 305 VAVRQDGTVWTWG 317
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 136/345 (39%), Gaps = 63/345 (18%)
Query: 45 IPKQLPPELFGCPAGANSRWLDIACG-HEHTAAVASDGTLFTWGANEFGQLGDGTEEGRK 103
I + P L G G +R L IA G H V + WG NE QLG G + R
Sbjct: 128 IFESFQPLLGGLTCG--TRGLVIAAGVGRHALVVTEQQKVQAWGNNESTQLGRGEPQYR- 184
Query: 104 HPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNF-PRLFWGA 162
V L V ++ AA+ E DG+I W WG N S + G+
Sbjct: 185 ---TVSGLTG--VTAVKSRLAHVAALKE----DGSI-----WTWGSNAASQLGADISAGS 230
Query: 163 -FTPNTI-----ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKG 216
TP + ++ G H VAL + G + WG N GQLG G + I
Sbjct: 231 RVTPMQVPGLTGATAIAVGDSHTVALLKDGSVWTWGDNRSGQLGD----AGRESQNHIPA 286
Query: 217 YAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKEL--LP 274
+ P L + ++ G + AV ++G V+TWG + QS ++ P
Sbjct: 287 ------QVPGLASVVAIAAGGSRTVAVRQDGTVWTWG----------TKQSNRQDFNPTP 330
Query: 275 RRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTY 334
+V L + D + H L + G ++ WG + LG T+ + +P +
Sbjct: 331 VQVPGLTDVIAADASDN--HVVVLRTDGTVWGWGRANL----LGGSTQDWLTMPVQ---- 380
Query: 335 FRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAAN 379
+P L + ++ G HT+ DG + WG + +GQ N
Sbjct: 381 ---VPDLA---DCKALSAGDEHTVALRADGTVWVWGTDDFGQLGN 419
>gi|340501848|gb|EGR28585.1| regulator of chromosome condensation, putative [Ichthyophthirius
multifiliis]
Length = 612
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 138/300 (46%), Gaps = 66/300 (22%)
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G L++WG N GQ+G+ + +P+ N+
Sbjct: 131 GVLYSWGQNTEGQMGN--------------------------------VYDPKTNNPKHR 158
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLG 200
++ NFP+L + ++II QVSCG H VA++ G + WG N QLG
Sbjct: 159 KIKI---------NFPKLVYP--LKDSIIIQVSCGYQHSVAITFNGNVLVWGDNSSSQLG 207
Query: 201 RGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQL 260
GI P I + + P ++ I VSCG H+ A+ +VY+WG G G L
Sbjct: 208 LGIN-----SPNSIY----YPVQIPNIQNIINVSCGSEHTLALDNRNQVYSWGNGEGGLL 258
Query: 261 GHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQ 320
GH + + + P+ + + ++ + CGG+HS ALT KG +Y+WG ++ GQLGL
Sbjct: 259 GHSN---EEIQASPKIIDKFQDLQVEFIICGGLHSLALTKKGHVYSWGRNEGGQLGLNQD 315
Query: 321 TRSFSLIPNESDTYFRNIPILVVPN----GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+L YF +P + V+ +A G +H+L ++G++ GWGYN GQ
Sbjct: 316 VLKDNL-------YFCCLPEKICGQLEGVFVKQIAAGDAHSLALAQNGQVFGWGYNINGQ 368
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 181/420 (43%), Gaps = 83/420 (19%)
Query: 2 DINEIIGETARPVDNIPAKSAIYVWGYNHSGQTGR---------KGRERQLRIPKQLPPE 52
+I +I+ + + A +Y WG N GQ G K R+ ++ PK + P
Sbjct: 112 NIVQILEKDSSTFSKKDAIGVLYSWGQNTEGQMGNVYDPKTNNPKHRKIKINFPKLVYPL 171
Query: 53 LFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRK--HPEKVKQ 110
+S + ++CG++H+ A+ +G + WG N QLG G +P ++
Sbjct: 172 -------KDSIIIQVSCGYQHSVAITFNGNVLVWGDNSSSQLGLGINSPNSIYYPVQIPN 224
Query: 111 LQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFW 160
+Q+ + ++SCG+ T A+ + ++++ WG +G P++
Sbjct: 225 IQN--IINVSCGSEHTLALD---------NRNQVYSWGNGEGGLLGHSNEEIQASPKII- 272
Query: 161 GAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF 220
F + + + CG +H +AL++ G + +WG NE GQLG V+K F
Sbjct: 273 DKFQ-DLQVEFIICGGLHSLALTKKGHVYSWGRNEGGQLGL--------NQDVLKDNLYF 323
Query: 221 --LDEAP--ELE--KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLP 274
L E +LE + Q++ G+ HS A+++NG+V+ WG GQLG QS + P
Sbjct: 324 CCLPEKICGQLEGVFVKQIAAGDAHSLALAQNGQVFGWGYNINGQLGLGQQQSDKQVSEP 383
Query: 275 RRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFS--------- 325
+++ L I+ V C G++ L + Q L
Sbjct: 384 KQIKNLQK--IEKVFCCGLNDQNQLGIEKLPIKIQNTHNQSILNQNINIIDQYKANDNSK 441
Query: 326 -----LIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM----RDGRIHGWGYNSYGQ 376
IP D +++ +P+L ++CGH+H+L ++ + + WG N +GQ
Sbjct: 442 NNNNIYIPKRMDCFYQ-MPVL-------HLSCGHNHSLAFVLADTKHYMVFAWGMNKHGQ 493
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 153/377 (40%), Gaps = 74/377 (19%)
Query: 23 IYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+ VWG N S Q G + P Q+P ++++CG EHT A+ +
Sbjct: 195 VLVWGDNSSSQLGLGINSPNSIYYPVQIPNI---------QNIINVSCGSEHTLALDNRN 245
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+++WG E G LG EE + P+ + + Q V+ I CG + A+ +
Sbjct: 246 QVYSWGNGEGGLLGHSNEEIQASPKIIDKFQDLQVEFIICGGLHSLALTK---------K 296
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPNTIIC----------------QVSCGSVHVVALSEC 185
++ WG+N+G L N C Q++ G H +AL++
Sbjct: 297 GHVYSWGRNEGGQLG-LNQDVLKDNLYFCCLPEKICGQLEGVFVKQIAAGDAHSLALAQN 355
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQ--GPRVIKGYAKFLDEAPELEKITQVSC---GEYHS 240
G + WGYN GQLG G Q P+ IK L+KI +V C + +
Sbjct: 356 GQVFGWGYNINGQLGLGQQQSDKQVSEPKQIKN----------LQKIEKVFCCGLNDQNQ 405
Query: 241 AAV---------SENGEVYTWGLGSVGQLGHCSLQSGDKEL-LPRRVVALDGIFIKDVAC 290
+ + N + + + Q + + +P+R+ + + ++C
Sbjct: 406 LGIEKLPIKIQNTHNQSILNQNINIIDQYKANDNSKNNNNIYIPKRMDCFYQMPVLHLSC 465
Query: 291 GGVHSCAL----TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
G HS A T ++AWG ++ GQLG+G ++ S+ TY ++I
Sbjct: 466 GHNHSLAFVLADTKHYMVFAWGMNKHGQLGIGDTGQNSSMA--RPITYLQDIIAYS---- 519
Query: 347 VQLVACGHSHTLVYMRD 363
+ACG H+L+ + D
Sbjct: 520 ---MACGSYHSLLIIND 533
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 110/238 (46%), Gaps = 26/238 (10%)
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK--ITQVSCGEYHSAAV 243
G+L +WG N GQ+G + P+ K F L+ I QVSCG HS A+
Sbjct: 131 GVLYSWGQNTEGQMG-NVYDPKTNNPKHRKIKINFPKLVYPLKDSIIIQVSCGYQHSVAI 189
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+ NG V WG S QLG + S + P ++ + I +V+CG H+ AL ++
Sbjct: 190 TFNGNVLVWGDNSSSQLG-LGINSPNSIYYPVQIPNIQNII--NVSCGSEHTLALDNRNQ 246
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 363
+Y+WG + G LG + S P D F+++ V+ + CG H+L +
Sbjct: 247 VYSWGNGEGGLLGHSNEEIQAS--PKIIDK-FQDLQ-------VEFIICGGLHSLALTKK 296
Query: 364 GRIHGWGYNSYGQAA-NE---KSTYAWYPSPVDWCVGE-----VRKLAAGGGHSAVLA 412
G ++ WG N GQ N+ K + P C G+ V+++AAG HS LA
Sbjct: 297 GHVYSWGRNEGGQLGLNQDVLKDNLYFCCLPEKIC-GQLEGVFVKQIAAGDAHSLALA 353
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 86/207 (41%), Gaps = 21/207 (10%)
Query: 217 YAKFLDEAPELEKITQVSCGEYHSAAVSEN---GEVYTWGLGSVGQLGHCSLQSGD---- 269
Y+KF P + V E S+ S+ G +Y+WG + GQ+G+ +
Sbjct: 98 YSKFEKNKPINQSGNIVQILEKDSSTFSKKDAIGVLYSWGQNTEGQMGNVYDPKTNNPKH 157
Query: 270 ---KELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSL 326
K P+ V L I V+CG HS A+T G + WG + + QLGLG
Sbjct: 158 RKIKINFPKLVYPLKDSIIIQVSCGYQHSVAITFNGNVLVWGDNSSSQLGLGI------- 210
Query: 327 IPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAW 386
N ++ + + I + N + V+CG HTL +++ WG G +
Sbjct: 211 --NSPNSIYYPVQIPNIQNIIN-VSCGSEHTLALDNRNQVYSWGNGEGGLLGHSNEEIQA 267
Query: 387 YPSPVD-WCVGEVRKLAAGGGHSAVLA 412
P +D + +V + GG HS L
Sbjct: 268 SPKIIDKFQDLQVEFIICGGLHSLALT 294
>gi|224011731|ref|XP_002295640.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209583671|gb|ACI64357.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 277
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 127/248 (51%), Gaps = 30/248 (12%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ CG HTAAVAS+G L+TWG +G+LG G E G P +V+ L + I+CG+ T
Sbjct: 38 VTCGSYHTAAVASNGDLYTWGGGMYGKLGHGNESGHSTPRRVEALVGLSIVDIACGSRHT 97
Query: 127 AAIAEPRENDGTISTSRLWVWG--QNQGSNFPRLFWGAFTPNTI-------ICQVSCGSV 177
A + S L+ WG +N + +TP + + Q+S
Sbjct: 98 AVVT---------SKGCLYTWGDKENGVAGHGDTEGHQYTPKLLERLNGKKVVQLSACGF 148
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H L++ AWG ++G+LG G T PR+I+ + + P QV+CG
Sbjct: 149 HTACLTDDHETFAWGEGKFGRLGNG-TERNCHSPRLIE---SLIGKYP-----CQVACGG 199
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
+HSA ++ +G++YT+G G GQLGH + +L P V ALDG+ +K + CG HS A
Sbjct: 200 FHSAVITRDGKMYTFGGGEHGQLGHADKVN---KLKPTLVEALDGVVVKQITCGWSHSVA 256
Query: 298 LTSKGALY 305
LTS+G +
Sbjct: 257 LTSEGEYH 264
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/227 (37%), Positives = 113/227 (49%), Gaps = 27/227 (11%)
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
+WG E GQLG G T + + ++D + IT V+CG YH+AAV+ NG++
Sbjct: 3 SWGRGEDGQLGIGDTSD--------QDEPTYVDALRGVGIITHVTCGSYHTAAVASNGDL 54
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
YTWG G G+LGH + +SG PRRV AL G+ I D+ACG H+ +TSKG LY WG
Sbjct: 55 YTWGGGMYGKLGHGN-ESGHST--PRRVEALVGLSIVDIACGSRHTAVVTSKGCLYTWGD 111
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG---VQLVACGHSHTLVYMRDGRI 366
+ G G G T P +L NG VQL ACG HT D
Sbjct: 112 KENGVAGHG-DTEGHQYTPK----------LLERLNGKKVVQLSACGF-HTACLTDDHET 159
Query: 367 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVR-KLAAGGGHSAVLA 412
WG +G+ N P ++ +G+ ++A GG HSAV+
Sbjct: 160 FAWGEGKFGRLGNGTERNCHSPRLIESLIGKYPCQVACGGFHSAVIT 206
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 139/300 (46%), Gaps = 51/300 (17%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSE-FVKSISCGAHCTAAIAEPRENDGTIST 141
+F+WG E GQLG G + P V L+ + ++CG++ TAA+A S
Sbjct: 1 VFSWGRGEDGQLGIGDTSDQDEPTYVDALRGVGIITHVTCGSYHTAAVA---------SN 51
Query: 142 SRLWVWGQNQGSNFPRLFWGA----FTPNTI-------ICQVSCGSVHVVALSECGLLQA 190
L+ WG G + +L G TP + I ++CGS H ++ G L
Sbjct: 52 GDLYTWG---GGMYGKLGHGNESGHSTPRRVEALVGLSIVDIACGSRHTAVVTSKGCLYT 108
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG E G G G T EG Q Y L E +K+ Q+S +H+A ++++ E +
Sbjct: 109 WGDKENGVAGHGDT-EGHQ-------YTPKLLERLNGKKVVQLSACGFHTACLTDDHETF 160
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
WG G G+LG+ + ++ PR + +L G + VACGG HS +T G +Y +GG
Sbjct: 161 AWGEGKFGRLGNGTERNCHS---PRLIESLIGKYPCQVACGGFHSAVITRDGKMYTFGGG 217
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQL--VACGHSHTLVYMRDGRIH 367
+ GQLG +D + P LV +GV + + CG SH++ +G H
Sbjct: 218 EHGQLG-------------HADKVNKLKPTLVEALDGVVVKQITCGWSHSVALTSEGEYH 264
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 113/247 (45%), Gaps = 43/247 (17%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y WG G+ G G E P+++ L G +DIACG HTA
Sbjct: 48 VASNGDLYTWGGGMYGKLGH-GNESGHSTPRRVEA-LVGLSI------VDIACGSRHTAV 99
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKH-PEKVKQLQSEFVKSIS-CGAHCTAAIAEPRE 134
V S G L+TWG E G G G EG ++ P+ +++L + V +S CG H TA + + E
Sbjct: 100 VTSKGCLYTWGDKENGVAGHGDTEGHQYTPKLLERLNGKKVVQLSACGFH-TACLTDDHE 158
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGA----FTPNTI-------ICQVSCGSVHVVALS 183
+ WG+ + F RL G +P I CQV+CG H ++
Sbjct: 159 T---------FAWGEGK---FGRLGNGTERNCHSPRLIESLIGKYPCQVACGGFHSAVIT 206
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
G + +G E+GQLG L+ P ++ EA + + Q++CG HS A+
Sbjct: 207 RDGKMYTFGGGEHGQLGHADKVNKLK-PTLV--------EALDGVVVKQITCGWSHSVAL 257
Query: 244 SENGEVY 250
+ GE +
Sbjct: 258 TSEGEYH 264
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 53/121 (43%), Gaps = 8/121 (6%)
Query: 24 YVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTL 83
+ WG G+ G G ER P+ + + P +ACG H+A + DG +
Sbjct: 160 FAWGEGKFGRLG-NGTERNCHSPRLIESLIGKYPC-------QVACGGFHSAVITRDGKM 211
Query: 84 FTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSR 143
+T+G E GQLG + + P V+ L VK I+CG + A+ E I S
Sbjct: 212 YTFGGGEHGQLGHADKVNKLKPTLVEALDGVVVKQITCGWSHSVALTSEGEYHLVIQLST 271
Query: 144 L 144
L
Sbjct: 272 L 272
>gi|328704352|ref|XP_003242465.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Acyrthosiphon pisum]
Length = 893
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 180/387 (46%), Gaps = 57/387 (14%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+ +Y WG +G+ G G E + P E+ + N + +ACG+ HT AV
Sbjct: 17 RLTMYCWGNTINGELGLGGIEENYILS---PEEIVNFESVNNIK--SVACGNNHTLAVTE 71
Query: 80 DGTLFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG L+ G+N+FGQLG DG R +K+ ++S + S++CG + A+ E
Sbjct: 72 DGQLYACGSNDFGQLGHDGC---RTKLQKIPGVESLVMTSVACGEAHSMALNE------- 121
Query: 139 ISTSRLWVWGQ----------NQGSNF-PRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
+L+ WG ++G + P++ + ++ Q+SCG H +AL+ G
Sbjct: 122 --WGQLYTWGSDSCGQLGLETDEGIQYKPKIV--KTLASMLLVQISCGYKHCMALTNHGE 177
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
L WG NE+GQLG G+ + P ++ I+ ++CG YHS VS++G
Sbjct: 178 LYTWGSNEFGQLGLGLGPGNVSKPTLVNSLVGL--------PISFIACGGYHSFVVSKSG 229
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
V+ WG GQLG S S P ++ + + +K +A G S LT G ++
Sbjct: 230 AVFGWGKNDFGQLGINSQTSLSS---PAQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTC 286
Query: 308 GGSQAGQLGLGPQTRSFS--LIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDG 364
G GQLG G SFS ++P + + ++ + V V CG HTL + G
Sbjct: 287 GAGMYGQLGHG----SFSNEIVPRKV--------LELMGSTVTQVTCGRRHTLTLVPSKG 334
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPV 391
R++ +G S GQ + S + P V
Sbjct: 335 RVYSFGLGSVGQLGTKSSINSNTPQLV 361
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/342 (30%), Positives = 158/342 (46%), Gaps = 41/342 (11%)
Query: 82 TLFTWGANEFGQLGDG--TEEGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDGT 138
T++ WG G+LG G E PE++ +S +KS++CG + T A+ E DG
Sbjct: 19 TMYCWGNTINGELGLGGIEENYILSPEEIVNFESVNNIKSVACGNNHTLAVTE----DG- 73
Query: 139 ISTSRLWVWGQNQGSNF------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
+L+ G N +L + ++ V+CG H +AL+E G L WG
Sbjct: 74 ----QLYACGSNDFGQLGHDGCRTKLQKIPGVESLVMTSVACGEAHSMALNEWGQLYTWG 129
Query: 193 YNEYGQLGRGITCEGLQ-GPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
+ GQLG T EG+Q P+++K A L + Q+SCG H A++ +GE+YT
Sbjct: 130 SDSCGQLGLE-TDEGIQYKPKIVKTLASML--------LVQISCGYKHCMALTNHGELYT 180
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG GQLG + P V +L G+ I +ACGG HS ++ GA++ WG +
Sbjct: 181 WGSNEFGQLGLGLGPGNVSK--PTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGWGKND 238
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGY 371
GQLG+ QT S P + T R + V+ +A G ++ DG + G
Sbjct: 239 FGQLGINSQTSLSS--PAQLKT-IRTVK-------VKYIAGGEDFSVFLTYDGGVFTCGA 288
Query: 372 NSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
YGQ + + P V +G V ++ G H+ L
Sbjct: 289 GMYGQLGHGSFSNEIVPRKVLELMGSTVTQVTCGRRHTLTLV 330
>gi|328704350|ref|XP_001948518.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Acyrthosiphon pisum]
Length = 1053
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 113/384 (29%), Positives = 179/384 (46%), Gaps = 57/384 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG +G+ G G E + P E+ + N + +ACG+ HT AV DG
Sbjct: 1 MYCWGNTINGELGLGGIEENYILS---PEEIVNFESVNNIK--SVACGNNHTLAVTEDGQ 55
Query: 83 LFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
L+ G+N+FGQLG DG R +K+ ++S + S++CG + A+ E
Sbjct: 56 LYACGSNDFGQLGHDGC---RTKLQKIPGVESLVMTSVACGEAHSMALNE---------W 103
Query: 142 SRLWVWGQ----------NQGSNF-PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
+L+ WG ++G + P++ + ++ Q+SCG H +AL+ G L
Sbjct: 104 GQLYTWGSDSCGQLGLETDEGIQYKPKIV--KTLASMLLVQISCGYKHCMALTNHGELYT 161
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG NE+GQLG G+ + P ++ I+ ++CG YHS VS++G V+
Sbjct: 162 WGSNEFGQLGLGLGPGNVSKPTLVNSLVGL--------PISFIACGGYHSFVVSKSGAVF 213
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
WG GQLG S S P ++ + + +K +A G S LT G ++ G
Sbjct: 214 GWGKNDFGQLGINSQTSLSS---PAQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAG 270
Query: 311 QAGQLGLGPQTRSFS--LIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIH 367
GQLG G SFS ++P + + ++ + V V CG HTL + GR++
Sbjct: 271 MYGQLGHG----SFSNEIVPRKV--------LELMGSTVTQVTCGRRHTLTLVPSKGRVY 318
Query: 368 GWGYNSYGQAANEKSTYAWYPSPV 391
+G S GQ + S + P V
Sbjct: 319 SFGLGSVGQLGTKSSINSNTPQLV 342
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 157/341 (46%), Gaps = 41/341 (12%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDGTI 139
++ WG G+LG G E PE++ +S +KS++CG + T A+ E DG
Sbjct: 1 MYCWGNTINGELGLGGIEENYILSPEEIVNFESVNNIKSVACGNNHTLAVTE----DG-- 54
Query: 140 STSRLWVWGQNQGSNF------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
+L+ G N +L + ++ V+CG H +AL+E G L WG
Sbjct: 55 ---QLYACGSNDFGQLGHDGCRTKLQKIPGVESLVMTSVACGEAHSMALNEWGQLYTWGS 111
Query: 194 NEYGQLGRGITCEGLQ-GPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
+ GQLG T EG+Q P+++K A L + Q+SCG H A++ +GE+YTW
Sbjct: 112 DSCGQLGLE-TDEGIQYKPKIVKTLASML--------LVQISCGYKHCMALTNHGELYTW 162
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G GQLG + P V +L G+ I +ACGG HS ++ GA++ WG +
Sbjct: 163 GSNEFGQLGLGLGPGNVSK--PTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGWGKNDF 220
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYN 372
GQLG+ QT S P + T R + V+ +A G ++ DG + G
Sbjct: 221 GQLGINSQTSLSS--PAQLKT-IRTVK-------VKYIAGGEDFSVFLTYDGGVFTCGAG 270
Query: 373 SYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
YGQ + + P V +G V ++ G H+ L
Sbjct: 271 MYGQLGHGSFSNEIVPRKVLELMGSTVTQVTCGRRHTLTLV 311
>gi|195133162|ref|XP_002011008.1| GI16306 [Drosophila mojavensis]
gi|193906983|gb|EDW05850.1| GI16306 [Drosophila mojavensis]
Length = 5077
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 166/353 (47%), Gaps = 57/353 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G +G+ G G + +P QLP + + + G +H A+ DG
Sbjct: 3115 VYACGEGTNGRLGL-GVTHNVPLPHQLP-----VLHQYVVKKVAVHSGGKHALALTLDGK 3168
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F+WG E G+LG G P V+ L+++ ++ I+CG+ +AAI+ S
Sbjct: 3169 VFSWGEGEDGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAIS---------SQG 3219
Query: 143 RLWVWGQNQ------GSNFPRL---FWGAFTPNTIICQVSCGS--VHVVALSECGLLQAW 191
L+ WG + G N +L A + +I QV+CGS +AL+E G + +W
Sbjct: 3220 ELYTWGLGEYGRLGHGDNATQLKPKLVAALSGRRVI-QVACGSRDAQTLALTEDGAVFSW 3278
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G ++G+LGRG + EG P I+ + + Q+ CG S A++ GEV+T
Sbjct: 3279 GDGDFGKLGRGGS-EGSSTPHEIERLSGI--------GVIQIECGAQFSLALTRAGEVWT 3329
Query: 252 WGLGSVGQLGHCSLQSGDKELL-PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
WG G +LGH GD+ + P+ + L G + VA G +H A+T G +YAWG +
Sbjct: 3330 WGKGDYYRLGH----GGDQHVRKPQPIAGLRGHRVIHVAVGALHCLAVTDAGQVYAWGDN 3385
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVY 360
GQ G G +T+ P LV+ V VACG SH++ +
Sbjct: 3386 DHGQQGSG-------------NTFVNKKPALVIGLDAVIVNRVACGSSHSMAW 3425
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 135/286 (47%), Gaps = 35/286 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R PK L L G DIACG H+AA+ + G
Sbjct: 4322 VYAWGEGEDGKLGHGNRMSYDR-PK-LVEHLNGMSVA------DIACGSAHSAAITASGH 4373
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ TWG +G+LG G E + P+ V+ L I+CG+ + +++
Sbjct: 4374 VLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDN------ 4427
Query: 143 RLWVWGQNQ-------GSNFPRLFWGAFTPNTI-ICQVSCGSVHVVALSECGLLQAWGYN 194
+W WG GS+ +L + + + + +V CGS VAL++ G + WG
Sbjct: 4428 -VWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKG 4486
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
++ +LG G + E ++ P+ + A + +KI ++ G H A S+ GEV+TWG
Sbjct: 4487 DFHRLGHG-SVEHVRRPKKVA--------ALQGKKIISIATGSLHCVACSDAGEVFTWGD 4537
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
GQLG ++ + + PR V AL G I V CG H+ AL++
Sbjct: 4538 NDEGQLGDGTVTAIQR---PRLVAALQGKHIVKVTCGSAHTLALST 4580
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 141/320 (44%), Gaps = 45/320 (14%)
Query: 51 PELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQ 110
P L G + + + G +H A+ +DG ++ WG E G+LG G P+ V+
Sbjct: 4290 PTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRMSYDRPKLVEH 4349
Query: 111 LQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFW 160
L V I+CG+ +AAI ++ + WG+ + P+L
Sbjct: 4350 LNGMSVADIACGSAHSAAIT---------ASGHVLTWGKGRYGRLGHGDSEDQLRPKLVE 4400
Query: 161 GAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF 220
I G + +++ + +WG +YG+LGRG + +G + P I+ A
Sbjct: 4401 ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS-DGCKLPYKIESLAGL 4459
Query: 221 LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL 280
+ +V CG S A++++G VYTWG G +LGH S++ + P++V AL
Sbjct: 4460 --------GVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVEHVRR---PKKVAAL 4508
Query: 281 DGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI 340
G I +A G +H A + G ++ WG + GQLG G + T + +
Sbjct: 4509 QGKKIISIATGSLHCVACSDAGEVFTWGDNDEGQLGDG------------TVTAIQRPRL 4556
Query: 341 LVVPNGVQL--VACGHSHTL 358
+ G + V CG +HTL
Sbjct: 4557 VAALQGKHIVKVTCGSAHTL 4576
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 173/410 (42%), Gaps = 62/410 (15%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S IY WG+NH GQ G G E RI P C A + R + +A G + AV D
Sbjct: 4214 STIYGWGHNHRGQLG--GLEGS-RIKTPTP-----CEALSLLRPVQLAGGEQSLFAVTPD 4265
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDG 137
G LF G G+LG G + P + LQ FVK ++ G HC A DG
Sbjct: 4266 GKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALT-----TDG 4320
Query: 138 TISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
+ + WG+ + P+L + ++CGS H A++ G
Sbjct: 4321 EV-----YAWGEGEDGKLGHGNRMSYDRPKLV--EHLNGMSVADIACGSAHSAAITASGH 4373
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSE 245
+ WG YG+LG G + + L+ P++++ + + ++C G+ + +++
Sbjct: 4374 VLTWGKGRYGRLGHGDSEDQLR-PKLVEALLGY--------RAIDIACGSGDAQTLCITD 4424
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+ V++WG G G+LG D LP ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4425 DDNVWSWGDGDYGKLGR---GGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVY 4481
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRD 363
WG +LG G S + R + G ++ +A G H +
Sbjct: 4482 TWGKGDFHRLGHG------------SVEHVRRPKKVAALQGKKIISIATGSLHCVACSDA 4529
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
G + WG N GQ + T P V G+ + K+ G H+ L+
Sbjct: 4530 GEVFTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4579
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 169/407 (41%), Gaps = 68/407 (16%)
Query: 23 IYVWGYNHSGQTG-RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+ VWG N Q G KG ++++P P + R + IA G + V+ DG
Sbjct: 3063 VMVWGLNDKEQLGGLKGS--KVKVPT-------FSPTISRLRPIHIAGGSKSLFVVSQDG 3113
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
++ G G+LG G P ++ L VK ++ G H A DG
Sbjct: 3114 KVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTL-----DG- 3167
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+++ WG+ + PRL I ++CGS H A+S G L
Sbjct: 3168 ----KVFSWGEGEDGKLGHGNRSTLDKPRLVEALRAKK--IRDIACGSSHSAAISSQGEL 3221
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAVSEN 246
WG EYG+LG G L+ P+++ + ++ QV+CG + + A++E+
Sbjct: 3222 YTWGLGEYGRLGHGDNATQLK-PKLVAALSG--------RRVIQVACGSRDAQTLALTED 3272
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
G V++WG G G+LG + P + L GI + + CG S ALT G ++
Sbjct: 3273 GAVFSWGDGDFGKLGRGGSEGSST---PHEIERLSGIGVIQIECGAQFSLALTRAGEVWT 3329
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDG 364
WG +LG G D + R + G ++ VA G H L G
Sbjct: 3330 WGKGDYYRLGHG------------GDQHVRKPQPIAGLRGHRVIHVAVGALHCLAVTDAG 3377
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPV---DWCVGEVRKLAAGGGHS 408
+++ WG N +GQ + + P+ V D + V ++A G HS
Sbjct: 3378 QVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVI--VNRVACGSSHS 3422
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 119/269 (44%), Gaps = 36/269 (13%)
Query: 60 ANSRWLDIA--CGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVK 117
AN ++ IA C H AV S+ ++WG + +LG G R+ P K++ L VK
Sbjct: 642 ANETFISIAAHCEGRHFLAVDSNFNAYSWGVGDSRRLGHGDCHARELPTKIESL-VRLVK 700
Query: 118 SISCGAHCTAAIAEPRENDGTISTSRLWVWGQ----------NQGSNFPRLFWGAFTPNT 167
S+ CG +AAI L+ WG+ + P +
Sbjct: 701 SVYCGCSYSAAIT---------LGGNLYTWGRGTYGRLGHGTSDDQCLPAMVMALKDHQV 751
Query: 168 IICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL 227
+ + G H + L+ GL+ AWG +YG+LG G +C P++I L
Sbjct: 752 VDVALGSGDAHTLCLTSEGLVFAWGDGDYGKLGNG-SCNSSLLPQLIDC----------L 800
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKEL-LPRRVVALDGIFIK 286
++ +V G S A+S G++Y+WG S LGH ++ + +PR + L I
Sbjct: 801 PRVQRVFAGAQFSLALSCEGQLYSWGKASC--LGHQLVERNVQGCSVPRLITGLQHKRIV 858
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQL 315
DVA G H AL+S G ++ WG + Q+
Sbjct: 859 DVAVGVAHCLALSSSGEIFGWGRNDNQQI 887
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 110/239 (46%), Gaps = 42/239 (17%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHE--HT 74
I ++ +Y WG G+ G QL+ P+L +G R + +ACG T
Sbjct: 3215 ISSQGELYTWGLGEYGRLGHGDNATQLK------PKLVAALSG--RRVIQVACGSRDAQT 3266
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
A+ DG +F+WG +FG+LG G EG P ++++L V I CGA + A+ E
Sbjct: 3267 LALTEDGAVFSWGDGDFGKLGRGGSEGSSTPHEIERLSGIGVIQIECGAQFSLALTRAGE 3326
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALS 183
+W WG+ ++ RL G P I + V+ G++H +A++
Sbjct: 3327 ---------VWTWGKG---DYYRLGHGGDQHVRKPQPIAGLRGHRVIHVAVGALHCLAVT 3374
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
+ G + AWG N++GQ G G T + P ++ G + + +V+CG HS A
Sbjct: 3375 DAGQVYAWGDNDHGQQGSGNTFVN-KKPALVIGLDAVI--------VNRVACGSSHSMA 3424
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 112/241 (46%), Gaps = 42/241 (17%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACG--HEHT 74
I A + WG G+ G E QLR P+L G R +DIACG T
Sbjct: 4368 ITASGHVLTWGKGRYGRLGHGDSEDQLR------PKLVEALLG--YRAIDIACGSGDAQT 4419
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
+ D +++WG ++G+LG G +G K P K++ L V + CG+ + A+ +
Sbjct: 4420 LCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTK--- 4476
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGAF----TPNTI-------ICQVSCGSVHVVALS 183
+ ++ WG+ +F RL G+ P + I ++ GS+H VA S
Sbjct: 4477 ------SGAVYTWGKG---DFHRLGHGSVEHVRRPKKVAALQGKKIISIATGSLHCVACS 4527
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ G + WG N+ GQLG G T +Q PR++ A + + I +V+CG H+ A+
Sbjct: 4528 DAGEVFTWGDNDEGQLGDG-TVTAIQRPRLVA--------ALQGKHIVKVTCGSAHTLAL 4578
Query: 244 S 244
S
Sbjct: 4579 S 4579
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 106/235 (45%), Gaps = 29/235 (12%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVS--CGSVHVVALSECGLLQAWGYNEYGQLG 200
+L+ W + P+ A N ++ C H +A+ +WG + +LG
Sbjct: 620 KLYNWHIAKPEAEPQQLDFAEIANETFISIAAHCEGRHFLAVDSNFNAYSWGVGDSRRLG 679
Query: 201 RGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQL 260
G C + P I+ + + V CG +SAA++ G +YTWG G+ G+L
Sbjct: 680 HG-DCHARELPTKIESLVRL---------VKSVYCGCSYSAAITLGGNLYTWGRGTYGRL 729
Query: 261 GHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLG 318
GH + D + LP V+AL + DVA G H+ LTS+G ++AWG G+LG G
Sbjct: 730 GH---GTSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCLTSEGLVFAWGDGDYGKLGNG 786
Query: 319 PQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNS 373
+ + SL+P D R VQ V G +L +G+++ WG S
Sbjct: 787 --SCNSSLLPQLIDCLPR----------VQRVFAGAQFSLALSCEGQLYSWGKAS 829
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 99/244 (40%), Gaps = 32/244 (13%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
QV+C V+ LS+ G L W + P F + A E
Sbjct: 604 QVACSEDVVLLLSKEGKLYNWH---------------IAKPEAEPQQLDFAEIANETFIS 648
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
C H AV N Y+WG+G +LGH + + LP ++ +L + +K V C
Sbjct: 649 IAAHCEGRHFLAVDSNFNAYSWGVGDSRRLGHGDCHARE---LPTKIESLVRL-VKSVYC 704
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
G +S A+T G LY WG G+LG G D + + + + V V
Sbjct: 705 GCSYSAAITLGGNLYTWGRGTYGRLGHG----------TSDDQCLPAMVMALKDHQVVDV 754
Query: 351 ACG--HSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
A G +HTL +G + WG YG+ N + P +D C+ V+++ AG S
Sbjct: 755 ALGSGDAHTLCLTSEGLVFAWGDGDYGKLGNGSCNSSLLPQLID-CLPRVQRVFAGAQFS 813
Query: 409 AVLA 412
L+
Sbjct: 814 LALS 817
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 101/230 (43%), Gaps = 29/230 (12%)
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI--TQVSCGEYHSAAVSE 245
+ WG N+ QLG GL+G +V K +P + ++ ++ G VS+
Sbjct: 3063 VMVWGLNDKEQLG------GLKGSKV-----KVPTFSPTISRLRPIHIAGGSKSLFVVSQ 3111
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHSCALTSKGA 303
+G+VY G G+ G+LG L LP ++ L +K VA GG H+ ALT G
Sbjct: 3112 DGKVYACGEGTNGRLG---LGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGK 3168
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 363
+++WG + G+LG G N S + + ++ +ACG SH+
Sbjct: 3169 VFSWGEGEDGKLGHG----------NRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQ 3218
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLA 412
G ++ WG YG+ + + P V G V ++A G + LA
Sbjct: 3219 GELYTWGLGEYGRLGHGDNATQLKPKLVAALSGRRVIQVACGSRDAQTLA 3268
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 33/70 (47%)
Query: 63 RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG 122
R + +A G H AV G ++ WG N+ GQ G G K P V L + V ++CG
Sbjct: 3359 RVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVIVNRVACG 3418
Query: 123 AHCTAAIAEP 132
+ + A P
Sbjct: 3419 SSHSMAWGLP 3428
>gi|407838156|gb|EKF99968.1| hypothetical protein TCSYLVIO_009110 [Trypanosoma cruzi]
Length = 644
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 111/377 (29%), Positives = 174/377 (46%), Gaps = 56/377 (14%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+ +Y WG SG +G G +R L ++ P G R +D+A G +++A++
Sbjct: 147 RQLLYSWG---SGASGELGTQRFLDCSTPTLAQI--TPFGV--RVVDVALGANYSSALSE 199
Query: 80 DGTLFTWGANEFGQLGDGT-EEGRKHPEK----VKQLQSEFVKSISCGAHCTAAIAEPRE 134
DG ++T+G ++GQLG G+ E +HP+ V Q + + H A A
Sbjct: 200 DGNIYTFGNGDWGQLGLGSARELDEHPDDKSAVVTVPQRIPLFEQNPAVHLAAGYAFAM- 258
Query: 135 NDGTISTSRLWVWGQN---QGSNFPRLFWGAFT----PNTI-------ICQVSCGSVHVV 180
+ ++ WG N Q PR F + P + I Q+ CGS +
Sbjct: 259 --ALTAGHHVYFWGNNNHGQSGLGPRYFDYSLRKVEEPTLVDTLEGKRIVQLGCGSFFSL 316
Query: 181 ALSECGLLQAWGYNEYGQLGRG-----------ITCEGLQGPRVIKGYAKFLDEAPELEK 229
AL + G L +WG E LG I E L + + P K
Sbjct: 317 ALGDDGTLYSWGLLECLGLGTTEEVRAAIDDPFIITESLSTEKRTVVLVPQVVHVPTEHK 376
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVV-ALDGIFIK 286
+ +V G++HS ++ GE++TWG+G G+LGH GDKE L+P +V AL G +
Sbjct: 377 LIRVHAGQWHSGVINTAGELFTWGVGYQGRLGH-----GDKEPALVPTKVRGALTGQHVI 431
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
DVACG H+ ALT +GA+Y WG + +GQ G + + + +R + + V G
Sbjct: 432 DVACGSFHTVALTERGAVYCWGDNASGQCGAKSTIDAVT-------SPYRVVNLEFVAGG 484
Query: 347 V-QLVACGHSHTLVYMR 362
V + ++CG HT+V M+
Sbjct: 485 VAKAISCGRQHTVVVMQ 501
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 157/419 (37%), Gaps = 101/419 (24%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG N+ GQ+G R + K P L G R + + CG + A+ DGT
Sbjct: 266 VYFWGNNNHGQSGLGPRYFDYSLRKVEEPTLVDTLEG--KRIVQLGCGSFFSLALGDDGT 323
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L++WG E LG TEE R AAI +P ++ST
Sbjct: 324 LYSWGLLECLGLGT-TEEVR------------------------AAIDDPFIITESLSTE 358
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+ V Q + P T + +I +V G H ++ G L WG G+LG G
Sbjct: 359 KRTVVLVPQVVHVP-------TEHKLI-RVHAGQWHSGVINTAGELFTWGVGYQGRLGHG 410
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
L P ++G A + + V+CG +H+ A++E G VY WG + GQ G
Sbjct: 411 DKEPALV-PTKVRG-------ALTGQHVIDVACGSFHTVALTERGAVYCWGDNASGQCGA 462
Query: 263 CSLQSGDKELLPRRVVALD---GIFIKDVACGGVHS---------------CAL------ 298
S + D P RVV L+ G K ++CG H+ C L
Sbjct: 463 KS--TIDAVTSPYRVVNLEFVAGGVAKAISCGRQHTVVVMQGPQSWCQRSCCKLDHNGKP 520
Query: 299 ---------------TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
T GA + G G++ G R F L+P+ D N
Sbjct: 521 RATHGQVFTFGETSRTGGGAAISGGPVICGKMQDGKVYRQFRLVPSLKDLNVIN------ 574
Query: 344 PNGVQLVACGHSHTLVYMRD----GRIHGWGYNSY-GQAANEKSTYAWYPSPVDWCVGE 397
V G HT V+ + + G G ++ G + S SP DW + +
Sbjct: 575 ------VKSGLHHTFVFAEELSNPMTVAGMGTSAMAGVDLPDYSGTQSLTSPRDWAISD 627
>gi|213626735|gb|AAI69997.1| RPGR [Xenopus laevis]
Length = 727
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 114/358 (31%), Positives = 169/358 (47%), Gaps = 32/358 (8%)
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
N + I+CG EHT V +G L+ +G+N +GQLG P VK L+SE V S
Sbjct: 36 NDKPAHISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKALKSEKVVFAS 95
Query: 121 CGAHCTAAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVH 178
CG + T E + + G S +L + + ++F + + F I Q+S GS
Sbjct: 96 CGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISF--FNTQYKIKQLSAGSNT 153
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
AL+ G L WG N GQL GL+ + K P I+ +SCG Y
Sbjct: 154 SAALTVDGKLFMWGDNSEGQL-------GLEKEAIYSTPQKIDIGKP----ISWISCGYY 202
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
HSA V+++GE+YT+G G+LG S K P+RV L G +K V+CGG H+ A+
Sbjct: 203 HSAFVTQDGELYTFGEPENGKLGLPS-DKLKKHKKPQRVSGLSGK-VKIVSCGGEHTIAV 260
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSF-SLIPNESDTYFRNIPILVVPNGVQLVACGHSHT 357
T K +Y +G Q GQLG G T F + +P D ++ + V CG +HT
Sbjct: 261 TEK-EVYTFGLGQFGQLGHG--TFIFETQLPKAVD--------VLTKKTILYVTCGENHT 309
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV---DWCVGEVRKLAAGGGHSAVLA 412
V G ++ +G +G+ + + P+ ++ V+ +A GG H V A
Sbjct: 310 AVITDKGLLYTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACGGCHMLVFA 367
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 93/194 (47%), Gaps = 38/194 (19%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+++WG N GQ G + +E P+++ G P W I+CG+ H+A V DG
Sbjct: 163 LFMWGDNSEGQLGLE-KEAIYSTPQKID---IGKPIS----W--ISCGYYHSAFVTQDGE 212
Query: 83 LFTWGANEFGQLGDGTEEGRKH--PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
L+T+G E G+LG +++ +KH P++V L + VK +SCG T A+ E
Sbjct: 213 LYTFGEPENGKLGLPSDKLKKHKKPQRVSGLSGK-VKIVSCGGEHTIAVTE--------- 262
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFTPNT------------IICQVSCGSVHVVALSECGLL 188
++ +G Q F +L G F T I V+CG H +++ GLL
Sbjct: 263 -KEVYTFGLGQ---FGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVITDKGLL 318
Query: 189 QAWGYNEYGQLGRG 202
+G +G+LG G
Sbjct: 319 YTFGDGRHGKLGLG 332
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 78/168 (46%), Gaps = 20/168 (11%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y +G +G+ G ++ K P+ +G + + ++CG EHT AV ++
Sbjct: 213 LYTFGEPENGKLGLPSD----KLKKHKKPQRV---SGLSGKVKIVSCGGEHTIAV-TEKE 264
Query: 83 LFTWGANEFGQLGDGTEEGRKH-PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
++T+G +FGQLG GT P+ V L + + ++CG + TA I + G + T
Sbjct: 265 VYTFGLGQFGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVITD----KGLLYT 320
Query: 142 ------SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALS 183
+L + +N + F + F T+ V+CG H++ +
Sbjct: 321 FGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQS-VACGGCHMLVFA 367
>gi|198471444|ref|XP_001355626.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
gi|198145920|gb|EAL32685.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
Length = 5072
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 163/354 (46%), Gaps = 59/354 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G +G+ G G + +P QLP + + + G +H A+ DG
Sbjct: 3149 VYACGEGTNGRLGL-GVTHNVPLPHQLP-----VLHQYVVKKVAVHSGGKHALALTLDGK 3202
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F+WG E G+LG G P V+ L+S+ ++ ++CG+ +AAI+ S
Sbjct: 3203 VFSWGEGEDGKLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAIS---------SQG 3253
Query: 143 RLWVW----------GQNQGSNFPRLFWGAFTPNTIICQVSCGS--VHVVALSECGLLQA 190
L+ W G N P+L A +I QV+CGS +AL+E G + +
Sbjct: 3254 ELYTWGLGEYGRLGHGDNSTQLKPKLV-AALAGRRVI-QVACGSRDAQTLALTEDGAVFS 3311
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG ++G+LGRG EG P I+ + + Q+ CG S A++ GEV+
Sbjct: 3312 WGDGDFGKLGRG-GSEGSDTPHEIERLSGI--------GVIQIECGAQFSLALTRAGEVW 3362
Query: 251 TWGLGSVGQLGHCSLQSGDKELL-PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
TWG G +LGH GD+ + P+ + L G + VA G +H A+T G +YAWG
Sbjct: 3363 TWGKGDYYRLGH----GGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGD 3418
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVY 360
+ GQ G G +T+ P LV+ V VACG SH++ +
Sbjct: 3419 NDHGQQGSG-------------NTFVNKKPALVIGLDAVFVNRVACGSSHSIAW 3459
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 136/286 (47%), Gaps = 35/286 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P+L G N DIACG H+AA+ + G
Sbjct: 4344 VYAWGEGEDGKLGHGNRMSYDR------PKLVEHLNGMNVA--DIACGSAHSAAITASGH 4395
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ TWG +G+LG G E + P+ V+ L I+CG+ + +++
Sbjct: 4396 VLTWGKGRYGRLGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLCINDDDN------ 4449
Query: 143 RLWVWGQNQ-------GSNFPRLFWGAFTPNTI-ICQVSCGSVHVVALSECGLLQAWGYN 194
+W WG GS+ +L + + + + +V CGS VAL++ G + WG
Sbjct: 4450 -VWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKG 4508
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
++ +LG G + + ++ P+ + A + +KI ++ G H A S++GEVYTWG
Sbjct: 4509 DFHRLGHG-SVDHVRRPKKVA--------ALQGKKIISIATGSLHCVACSDSGEVYTWGD 4559
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
GQLG ++ + + PR V AL G I V CG H+ AL++
Sbjct: 4560 NDEGQLGDGTVTAIQR---PRLVAALQGKHIVKVTCGSAHTLALST 4602
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 174/410 (42%), Gaps = 62/410 (15%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S IY WG+NH GQ G G E RI P C A + R + +A G + AV D
Sbjct: 4236 STIYGWGHNHRGQLG--GLEGS-RIKTPTP-----CEALSLLRPVQLAGGEQSLFAVTPD 4287
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDG 137
G LF G G+LG G + P + LQ FVK ++ G HC A E
Sbjct: 4288 GKLFATGYGSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTE------ 4341
Query: 138 TISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
++ WG+ + P+L N + ++CGS H A++ G
Sbjct: 4342 ----GEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMN--VADIACGSAHSAAITASGH 4395
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSE 245
+ WG YG+LG G + + L+ P++++ + + ++C G+ + +++
Sbjct: 4396 VLTWGKGRYGRLGHGDSEDQLR-PQLVEALLGY--------RAIDIACGSGDAQTLCIND 4446
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+ V++WG G G+LG D LP ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4447 DDNVWSWGDGDYGKLGR---GGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVY 4503
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRD 363
WG +LG G S + R + G ++ +A G H +
Sbjct: 4504 TWGKGDFHRLGHG------------SVDHVRRPKKVAALQGKKIISIATGSLHCVACSDS 4551
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
G ++ WG N GQ + T P V G+ + K+ G H+ L+
Sbjct: 4552 GEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4601
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 168/408 (41%), Gaps = 70/408 (17%)
Query: 23 IYVWGYNHSGQTG-RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+ VWG N Q G KG + ++ Q L R + IA G + V +G
Sbjct: 3097 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRL---------RPIHIAGGSKSLFIVGQNG 3147
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
++ G G+LG G P ++ L VK ++ G H A DG
Sbjct: 3148 KVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTL-----DG- 3201
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+++ WG+ + PRL + I V+CGS H A+S G L
Sbjct: 3202 ----KVFSWGEGEDGKLGHGNRTTLDKPRLVETLRSKK--IRDVACGSSHSAAISSQGEL 3255
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAVSEN 246
WG EYG+LG G L+ P+++ A ++ QV+CG + + A++E+
Sbjct: 3256 YTWGLGEYGRLGHGDNSTQLK-PKLVAALAG--------RRVIQVACGSRDAQTLALTED 3306
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
G V++WG G G+LG + D P + L GI + + CG S ALT G ++
Sbjct: 3307 GAVFSWGDGDFGKLGRGGSEGSDT---PHEIERLSGIGVIQIECGAQFSLALTRAGEVWT 3363
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDG 364
WG +LG G D + R + G ++ VA G H L G
Sbjct: 3364 WGKGDYYRLGHG------------GDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAG 3411
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE----VRKLAAGGGHS 408
+++ WG N +GQ + + P+ V +G V ++A G HS
Sbjct: 3412 QVYAWGDNDHGQQGSGNTFVNKKPALV---IGLDAVFVNRVACGSSHS 3456
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 117/248 (47%), Gaps = 29/248 (11%)
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
V G H +AL+ G + +WG E G+LG G L PR++ E +KI
Sbjct: 3187 VHSGGKHALALTLDGKVFSWGEGEDGKLGHG-NRTTLDKPRLV--------ETLRSKKIR 3237
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVA 289
V+CG HSAA+S GE+YTWGLG G+LGH GD +L P+ V AL G + VA
Sbjct: 3238 DVACGSSHSAAISSQGELYTWGLGEYGRLGH-----GDNSTQLKPKLVAALAGRRVIQVA 3292
Query: 290 CGG--VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
CG + ALT GA+++WG G+LG G S + P+E + I GV
Sbjct: 3293 CGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDT--PHEIER-LSGI-------GV 3342
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGG 406
+ CG +L R G + WG Y + + + P P+ G V +A G
Sbjct: 3343 IQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGAL 3402
Query: 407 HSAVLADA 414
H + DA
Sbjct: 3403 HCLAVTDA 3410
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 109/239 (45%), Gaps = 42/239 (17%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHE--HT 74
I ++ +Y WG G+ G QL+ P+L AG R + +ACG T
Sbjct: 3249 ISSQGELYTWGLGEYGRLGHGDNSTQLK------PKLVAALAG--RRVIQVACGSRDAQT 3300
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
A+ DG +F+WG +FG+LG G EG P ++++L V I CGA + A+ E
Sbjct: 3301 LALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGE 3360
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALS 183
+W WG+ ++ RL G P I + V+ G++H +A++
Sbjct: 3361 ---------VWTWGKG---DYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVT 3408
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
+ G + AWG N++GQ G G T + VI A F + +V+CG HS A
Sbjct: 3409 DAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVF---------VNRVACGSSHSIA 3458
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 133/310 (42%), Gaps = 46/310 (14%)
Query: 69 CGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
C H A+ + ++WG E +LG G R P K+ L VK++ CG +AA
Sbjct: 627 CEGRHFMAIDINRNAYSWGNGEDHRLGHGDTHARAVPTKITLL-DRCVKAVFCGCSYSAA 685
Query: 129 IAEPRENDGTISTSRLWVWGQ----------NQGSNFPRLFWGAFTPNTIICQVSCGSVH 178
I + L+ WG+ + P + I + G H
Sbjct: 686 IT---------CSGNLYTWGRGTYARLGHGNSDDQPLPTVVMALTEHEIIDVALGSGDAH 736
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
+ L+ G + AWG +YG+LG G G P +++ L K+ +V G
Sbjct: 737 SLCLTSEGHVYAWGDADYGKLGNG-NLNGSMSPVLVES----------LPKVQRVFAGAQ 785
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQ-SGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
S A++ +G++Y+WG S LGH ++ S +PR + L I DVA G H A
Sbjct: 786 FSMALTTDGQLYSWGKASC--LGHQLVERSAQWCSVPRLISGLQHKRIVDVAVGVAHCLA 843
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHS 355
L+S G ++ WG + + Q + P + S S+ R +PILV + VAC S
Sbjct: 844 LSSCGEVFGWGRNDSQQ--ICPSSVS-------SEPLLR-VPILVALPTLPASGVACTAS 893
Query: 356 HTLVYMRDGR 365
+L++ + R
Sbjct: 894 QSLIWTQSSR 903
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 132/313 (42%), Gaps = 52/313 (16%)
Query: 105 PEKVKQLQSEF-VKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAF 163
P + L +F V+ I C ++E DG +L+ W + P+L
Sbjct: 566 PSSLPLLNCKFQVQQIVCSESIVLILSE----DG-----KLYNWRMFKPETEPQLLEEIA 616
Query: 164 TPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDE 223
+ C H +A+ +WG E +LG G T R + LD
Sbjct: 617 HETIVSIASHCEGRHFMAIDINRNAYSWGNGEDHRLGHGDT-----HARAVPTKITLLDR 671
Query: 224 APELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
+ V CG +SAA++ +G +YTWG G+ +LGH + D + LP V+AL
Sbjct: 672 C-----VKAVFCGCSYSAAITCSGNLYTWGRGTYARLGH---GNSDDQPLPTVVMALTEH 723
Query: 284 FIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL 341
I DVA G HS LTS+G +YAWG + G+LG G S S P+L
Sbjct: 724 EIIDVALGSGDAHSLCLTSEGHVYAWGDADYGKLGNGNLNGSMS-------------PVL 770
Query: 342 V--VPNGVQLVACGHSHTLVYMRDGRIHGWGYNS-YGQAANEKSTYAWYPSPVDWCVGEV 398
V +P VQ V G ++ DG+++ WG S G E+S WC V
Sbjct: 771 VESLPK-VQRVFAGAQFSMALTTDGQLYSWGKASCLGHQLVERSA--------QWC--SV 819
Query: 399 RKLAAGGGHSAVL 411
+L +G H ++
Sbjct: 820 PRLISGLQHKRIV 832
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 100/228 (43%), Gaps = 25/228 (10%)
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ WG N+ QLG GL+G +V F L I ++ G V +NG
Sbjct: 3097 VMVWGLNDKEQLG------GLKGSKV--KVPTFSQTISRLRPI-HIAGGSKSLFIVGQNG 3147
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHSCALTSKGALY 305
+VY G G+ G+LG L LP ++ L +K VA GG H+ ALT G ++
Sbjct: 3148 KVYACGEGTNGRLG---LGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVF 3204
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
+WG + G+LG G R+ P +T + ++ VACG SH+ G
Sbjct: 3205 SWGEGEDGKLGHG--NRTTLDKPRLVET--------LRSKKIRDVACGSSHSAAISSQGE 3254
Query: 366 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLA 412
++ WG YG+ + ++ P V G V ++A G + LA
Sbjct: 3255 LYTWGLGEYGRLGHGDNSTQLKPKLVAALAGRRVIQVACGSRDAQTLA 3302
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 10/111 (9%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGAN-SRWLDIACGHEHTAAVASDG 81
++ WG + G G ++ +R P+ + AG R + +A G H AV G
Sbjct: 3361 VWTWGKGDYYRLGHGG-DQHVRKPQPI--------AGLRGRRVIHVAVGALHCLAVTDAG 3411
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
++ WG N+ GQ G G K P V L + FV ++CG+ + A P
Sbjct: 3412 QVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIAWGLP 3462
>gi|408681155|ref|YP_006880982.1| hypothetical protein SVEN_5437 [Streptomyces venezuelae ATCC 10712]
gi|328885484|emb|CCA58723.1| hypothetical protein SVEN_5437 [Streptomyces venezuelae ATCC 10712]
Length = 386
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 161/382 (42%), Gaps = 59/382 (15%)
Query: 18 PAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHT--- 74
P + WG N +GQ G + +Q P + G A+ R L A G T
Sbjct: 28 PRDPWVRAWGGNGAGQLGNG-----TTLAQQTPAGVRGLNR-ADVRHL-AAGGDSDTRSF 80
Query: 75 -AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
A+ +DGT+ +WG N GQLGDG+ GR P V L V + G + A
Sbjct: 81 AVALLNDGTVQSWGGNAAGQLGDGSTVGRSFPAAVTGLSG--VSKTAAGVNSAYA----- 133
Query: 134 ENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQ-------VSCGSVHVVALSECG 186
+ R+ WG N GA +P + Q ++ G H +AL E G
Sbjct: 134 -----VRGGRVLAWGDNTYGQLGNGTAGA-SPRPVAVQSLNKVEDIAAGCFHAIALREDG 187
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ WG N YGQLG G T + RV P+L + +VS G +HS A + +
Sbjct: 188 TVWTWGRNHYGQLGLGTTTDRNTPQRV-----------PDLTDVVEVSAGCHHSLARTAD 236
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
G V WG + GQLG+ S + + + IF G HS A+ G L A
Sbjct: 237 GTVKAWGYNASGQLGNGSTAHASAPVDVAHLADVSRIF-----AAGYHSFAVLDDGQLRA 291
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRI 366
WG + AG LG G + +P +P L V +A G++HT+ + DG +
Sbjct: 292 WGWNSAGHLGDGSTVSRTTPVP---------VPGLT---DVTALAGGYNHTVAVLADGSV 339
Query: 367 HGWGYNSYGQAANEKSTYAWYP 388
WG N+ GQ + +T + P
Sbjct: 340 LAWGENTLGQLGDGTTTNSSTP 361
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 111/377 (29%), Positives = 173/377 (45%), Gaps = 49/377 (12%)
Query: 86 WGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC-TAAIAEPRENDGTISTSRL 144
WG N GQLG+GT ++ P V+ L V+ ++ G T + A NDGT+ +
Sbjct: 36 WGGNGAGQLGNGTTLAQQTPAGVRGLNRADVRHLAAGGDSDTRSFAVALLNDGTVQS--- 92
Query: 145 WVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQ 198
WG N GS R F A T + + + + G A+ G + AWG N YGQ
Sbjct: 93 --WGGNAAGQLGDGSTVGRSFPAAVTGLSGVSKTAAGVNSAYAV-RGGRVLAWGDNTYGQ 149
Query: 199 LGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVG 258
LG G PR + L K+ ++ G +H+ A+ E+G V+TWG G
Sbjct: 150 LGNGTAGA---SPRPVA--------VQSLNKVEDIAAGCFHAIALREDGTVWTWGRNHYG 198
Query: 259 QLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLG 318
QLG L + P+RV L + +V+ G HS A T+ G + AWG + +GQLG G
Sbjct: 199 QLG---LGTTTDRNTPQRVPDLTDVV--EVSAGCHHSLARTADGTVKAWGYNASGQLGNG 253
Query: 319 PQTRSFSLIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
T + P+ V + + ++ A G+ H+ + DG++ WG+NS G
Sbjct: 254 -------------STAHASAPVDVAHLADVSRIFAAGY-HSFAVLDDGQLRAWGWNSAGH 299
Query: 377 AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLADACSLK--ELCEFRLAESVTLSN 433
+ + P PV + +V LA G H+ AVLAD L E +L + T ++
Sbjct: 300 LGDGSTVSRTTPVPVP-GLTDVTALAGGYNHTVAVLADGSVLAWGENTLGQLGDGTTTNS 358
Query: 434 ASEIEDVASRTGSEALA 450
++ + + +G+ +A
Sbjct: 359 STPVTALPPGSGATRVA 375
>gi|295789055|ref|NP_001171421.1| X-linked retinitis pigmentosa GTPase regulator isoform 1 [Mus
musculus]
Length = 1039
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 114/367 (31%), Positives = 173/367 (47%), Gaps = 62/367 (16%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++CG EHTA V + L+ +G+N +GQLG G++ P +K L+ E VK +CG + T
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 137
Query: 127 AAIAEPRENDGTISTSRLWVW---GQNQG----------SNFPRLFWGAFTPNTIICQVS 173
+ST V+ G N+G F ++ + FTP I Q+S
Sbjct: 138 L-----------VSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVF--FTPADTIKQLS 184
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
G+ AL+E G L WG N GQ+G V G + I+ +
Sbjct: 185 AGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVG-----------KPISWI 233
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL-----PRRVVALDGIFIKDV 288
SCG YHSA V+ +GE+YT+G G+LG + ELL P+RV+ + I+ V
Sbjct: 234 SCGYYHSAFVTMDGELYTFGEPENGKLGLPN------ELLMNHRSPQRVLGIPERVIQ-V 286
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
ACGG H+ LT K +YA+G Q GQLGLG +F +E R + +
Sbjct: 287 ACGGGHTVVLTEK-VVYAFGLGQFGQLGLG----TFLFETSEPKIIER-----IKDQKIC 336
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQ--AANEKSTYAWYPSP-VDWCVGEVRKLAAGG 405
++CG +HT + G ++ +G +G+ E T ++P+ ++ V+ +A GG
Sbjct: 337 HISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGG 396
Query: 406 GHSAVLA 412
H V A
Sbjct: 397 CHMLVFA 403
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 124/278 (44%), Gaps = 29/278 (10%)
Query: 141 TSRLWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
T ++ +G+ + N P FW F + IC +SCG H ++ L +G N +GQL
Sbjct: 49 TGAVFTFGKTKFAENIPSKFW--FKNDIPIC-LSCGDEHTAIVTGNNKLYMFGSNNWGQL 105
Query: 200 GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ 259
G G + P IK A + EK+ +CG H+ ++ G VY G + GQ
Sbjct: 106 GLGSKA-AIIKPTCIK--------ALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQ 156
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LG + D++ + V IK ++ G S ALT G L+ WG + GQ+GL
Sbjct: 157 LGLGD--TDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGL-- 212
Query: 320 QTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ--A 377
+ +S IP+E + V + ++CG+ H+ DG ++ +G G+
Sbjct: 213 EDKSNVCIPHE----------VTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGL 262
Query: 378 ANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADAC 415
NE P V V ++A GGGH+ VL +
Sbjct: 263 PNELLMNHRSPQRVLGIPERVIQVACGGGHTVVLTEKV 300
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 89/195 (45%), Gaps = 38/195 (19%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+++WG N GQ G + + + IP ++ G W I+CG+ H+A V DG
Sbjct: 199 LFMWGDNSEGQIGLEDK-SNVCIPHEV-------TVGKPISW--ISCGYYHSAFVTMDGE 248
Query: 83 LFTWGANEFGQLGDGTEEGRKH--PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
L+T+G E G+LG E H P++V + E V ++CG T + E
Sbjct: 249 LYTFGEPENGKLGLPNELLMNHRSPQRVLGI-PERVIQVACGGGHTVVLTE--------- 298
Query: 141 TSRLWVWGQNQGSNFPRLFWGAF-----TPNTI-------ICQVSCGSVHVVALSECGLL 188
++ +G Q F +L G F P I IC +SCG H ++E GLL
Sbjct: 299 -KVVYAFGLGQ---FGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLL 354
Query: 189 QAWGYNEYGQLGRGI 203
+G +G+LG G+
Sbjct: 355 YTFGDGRHGKLGLGM 369
>gi|449081281|sp|Q9R0X5.2|RPGR_MOUSE RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
Short=mRpgr; Flags: Precursor
Length = 1001
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 114/367 (31%), Positives = 173/367 (47%), Gaps = 62/367 (16%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++CG EHTA V + L+ +G+N +GQLG G++ P +K L+ E VK +CG + T
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 99
Query: 127 AAIAEPRENDGTISTSRLWVW---GQNQG----------SNFPRLFWGAFTPNTIICQVS 173
+ST V+ G N+G F ++ + FTP I Q+S
Sbjct: 100 L-----------VSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVF--FTPADTIKQLS 146
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
G+ AL+E G L WG N GQ+G V G + I+ +
Sbjct: 147 AGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVG-----------KPISWI 195
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL-----PRRVVALDGIFIKDV 288
SCG YHSA V+ +GE+YT+G G+LG + ELL P+RV+ + I+ V
Sbjct: 196 SCGYYHSAFVTMDGELYTFGEPENGKLGLPN------ELLMNHRSPQRVLGIPERVIQ-V 248
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
ACGG H+ LT K +YA+G Q GQLGLG +F +E R + +
Sbjct: 249 ACGGGHTVVLTEK-VVYAFGLGQFGQLGLG----TFLFETSEPKIIER-----IKDQKIC 298
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQ--AANEKSTYAWYPSP-VDWCVGEVRKLAAGG 405
++CG +HT + G ++ +G +G+ E T ++P+ ++ V+ +A GG
Sbjct: 299 HISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGG 358
Query: 406 GHSAVLA 412
H V A
Sbjct: 359 CHMLVFA 365
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 124/278 (44%), Gaps = 29/278 (10%)
Query: 141 TSRLWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
T ++ +G+ + N P FW F + IC +SCG H ++ L +G N +GQL
Sbjct: 11 TGAVFTFGKTKFAENIPSKFW--FKNDIPIC-LSCGDEHTAIVTGNNKLYMFGSNNWGQL 67
Query: 200 GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ 259
G G + P IK A + EK+ +CG H+ ++ G VY G + GQ
Sbjct: 68 GLGSKA-AIIKPTCIK--------ALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQ 118
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LG + D++ + V IK ++ G S ALT G L+ WG + GQ+GL
Sbjct: 119 LGLGD--TDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGL-- 174
Query: 320 QTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ--A 377
+ +S IP+E + V + ++CG+ H+ DG ++ +G G+
Sbjct: 175 EDKSNVCIPHE----------VTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGL 224
Query: 378 ANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADAC 415
NE P V V ++A GGGH+ VL +
Sbjct: 225 PNELLMNHRSPQRVLGIPERVIQVACGGGHTVVLTEKV 262
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 89/195 (45%), Gaps = 38/195 (19%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+++WG N GQ G + + + IP ++ G W I+CG+ H+A V DG
Sbjct: 161 LFMWGDNSEGQIGLEDK-SNVCIPHEV-------TVGKPISW--ISCGYYHSAFVTMDGE 210
Query: 83 LFTWGANEFGQLGDGTEEGRKH--PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
L+T+G E G+LG E H P++V + E V ++CG T + E
Sbjct: 211 LYTFGEPENGKLGLPNELLMNHRSPQRVLGI-PERVIQVACGGGHTVVLTE--------- 260
Query: 141 TSRLWVWGQNQGSNFPRLFWGAF-----TPNTI-------ICQVSCGSVHVVALSECGLL 188
++ +G Q F +L G F P I IC +SCG H ++E GLL
Sbjct: 261 -KVVYAFGLGQ---FGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLL 316
Query: 189 QAWGYNEYGQLGRGI 203
+G +G+LG G+
Sbjct: 317 YTFGDGRHGKLGLGM 331
>gi|5824124|emb|CAB54041.1| RPGR protein [Mus musculus]
Length = 1001
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 114/367 (31%), Positives = 173/367 (47%), Gaps = 62/367 (16%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++CG EHTA V + L+ +G+N +GQLG G++ P +K L+ E VK +CG + T
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 99
Query: 127 AAIAEPRENDGTISTSRLWVW---GQNQG----------SNFPRLFWGAFTPNTIICQVS 173
+ST V+ G N+G F ++ + FTP I Q+S
Sbjct: 100 L-----------VSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVF--FTPADTIKQLS 146
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
G+ AL+E G L WG N GQ+G V G + I+ +
Sbjct: 147 AGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVG-----------KPISWI 195
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL-----PRRVVALDGIFIKDV 288
SCG YHSA V+ +GE+YT+G G+LG + ELL P+RV+ + I+ V
Sbjct: 196 SCGYYHSAFVTMDGELYTFGEPENGKLGLPN------ELLMNHRSPQRVLGIPERVIQ-V 248
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
ACGG H+ LT K +YA+G Q GQLGLG +F +E R + +
Sbjct: 249 ACGGGHTVVLTEK-VVYAFGLGQFGQLGLG----TFLFETSEPKIIER-----IKDQKIC 298
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQ--AANEKSTYAWYPSP-VDWCVGEVRKLAAGG 405
++CG +HT + G ++ +G +G+ E T ++P+ ++ V+ +A GG
Sbjct: 299 HISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGG 358
Query: 406 GHSAVLA 412
H V A
Sbjct: 359 CHMLVFA 365
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 124/278 (44%), Gaps = 29/278 (10%)
Query: 141 TSRLWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
T ++ +G+ + N P FW F + IC +SCG H ++ L +G N +GQL
Sbjct: 11 TGAVFTFGKTKFAENIPSKFW--FKNDIPIC-LSCGDEHTAIVTGNNKLYMFGSNNWGQL 67
Query: 200 GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ 259
G G + P IK A + EK+ +CG H+ ++ G VY G + GQ
Sbjct: 68 GLGSKA-AIIKPTCIK--------ALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQ 118
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LG + D++ + V IK ++ G S ALT G L+ WG + GQ+GL
Sbjct: 119 LGLGD--TDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGL-- 174
Query: 320 QTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ--A 377
+ +S IP+E + V + ++CG+ H+ DG ++ +G G+
Sbjct: 175 EDKSNVCIPHE----------VTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGL 224
Query: 378 ANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADAC 415
NE P V V ++A GGGH+ VL +
Sbjct: 225 PNELLMNHRSPQRVLGIPERVIQVACGGGHTVVLTEKV 262
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 89/195 (45%), Gaps = 38/195 (19%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+++WG N GQ G + + + IP ++ G W I+CG+ H+A V DG
Sbjct: 161 LFMWGDNSEGQIGLEDK-SNVCIPHEV-------TVGKPISW--ISCGYYHSAFVTMDGE 210
Query: 83 LFTWGANEFGQLGDGTEEGRKH--PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
L+T+G E G+LG E H P++V + E V ++CG T + E
Sbjct: 211 LYTFGEPENGKLGLPNELLMNHRSPQRVLGI-PERVIQVACGGGHTVVLTE--------- 260
Query: 141 TSRLWVWGQNQGSNFPRLFWGAF-----TPNTI-------ICQVSCGSVHVVALSECGLL 188
++ +G Q F +L G F P I IC +SCG H ++E GLL
Sbjct: 261 -KVVYAFGLGQ---FGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLL 316
Query: 189 QAWGYNEYGQLGRGI 203
+G +G+LG G+
Sbjct: 317 YTFGDGRHGKLGLGM 331
>gi|312373149|gb|EFR20956.1| hypothetical protein AND_18231 [Anopheles darlingi]
Length = 1270
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 149/322 (46%), Gaps = 45/322 (13%)
Query: 68 ACGHEHTAAVASDGTLFTWGANEFGQLGDGTEE-GRKHPEKVKQLQSEFVKSISCGAHCT 126
ACG HT + +DG +++ G N+ GQLG E K P+ + L++ + CG +
Sbjct: 353 ACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESLPNKRPQLLTALENYIITQACCGTAHS 412
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNF-----------PRLFWGAFTPNTIICQVSCG 175
A+ + +++ WG N PRL + Q++ G
Sbjct: 413 LALT---------NWGQVYSWGSNAVGQLGQETDTTRQIIPRLIRSIAAKQVV--QIAAG 461
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
H +AL+ G L AWG N YGQLG G+T E + P +++ A I ++C
Sbjct: 462 HYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGV--------PIAFIAC 513
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
G HS AVS++G ++ WG + GQLG L S P ++ L + ++ V+CG S
Sbjct: 514 GGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRQ---FPTQLRTLRSLGVRYVSCGDDFS 570
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS 355
LT+ G ++ G GQLG G ++P + ++ + + +ACG
Sbjct: 571 VFLTAGGGVFTCGAGTFGQLGHGSCNN--EILP--------RMVFELMGSKITQIACGRR 620
Query: 356 HTLVYM-RDGRIHGWGYNSYGQ 376
HTL ++ G+I+G+G + GQ
Sbjct: 621 HTLAFVPSRGKIYGFGLSGVGQ 642
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 109/213 (51%), Gaps = 29/213 (13%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I + +CG+ H + L+ G + + G N++GQLG + + P+++ ++
Sbjct: 349 IARAACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESLPNKRPQLLTALENYI------- 401
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
ITQ CG HS A++ G+VY+WG +VGQLG + ++++PR + ++ + +
Sbjct: 402 -ITQACCGTAHSLALTNWGQVYSWGSNAVGQLGQET--DTTRQIIPRLIRSIAAKQVVQI 458
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-----V 343
A G H ALT+ G LYAWG + GQLGLG S P LV V
Sbjct: 459 AAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVS------------TPTLVQSLAGV 506
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
P + +ACG +H+ + G I GWG N++GQ
Sbjct: 507 P--IAFIACGGNHSFAVSKSGAIFGWGKNTFGQ 537
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 106/229 (46%), Gaps = 32/229 (13%)
Query: 200 GRGITCEGLQGPRVIKGYAKFLDEAPE------LEKITQVSCGEYHSAAVSENGEVYTWG 253
G + C +QG V AK + P ++I + +CG H+ ++ +G++Y+ G
Sbjct: 314 GENVECGPIQG-EVFPSLAKVMVMVPRKMDWMHAKEIARAACGASHTLLLTNDGKMYSCG 372
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
GQLGH +K P+ + AL+ I CG HS ALT+ G +Y+WG + G
Sbjct: 373 NNDHGQLGHDVESLPNKR--PQLLTALENYIITQACCGTAHSLALTNWGQVYSWGSNAVG 430
Query: 314 QLGLGPQTRSFSLIPNESDTYFRNIPIL---VVPNGVQLVACGHSHTLVYMRDGRIHGWG 370
QLG E+DT + IP L + V +A GH H L G ++ WG
Sbjct: 431 QLG------------QETDTTRQIIPRLIRSIAAKQVVQIAAGHYHCLALTNSGELYAWG 478
Query: 371 YNSYGQ----AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADA 414
N+YGQ NEK + P+ V G + +A GG HS ++ +
Sbjct: 479 SNAYGQLGLGMTNEKVS---TPTLVQSLAGVPIAFIACGGNHSFAVSKS 524
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 114/252 (45%), Gaps = 41/252 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG N GQ G++ + IP+ + + A + + IA GH H A+ + G
Sbjct: 421 VYSWGSNAVGQLGQETDTTRQIIPRLIR-------SIAAKQVVQIAAGHYHCLALTNSGE 473
Query: 83 LFTWGANEFGQLGDG-TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
L+ WG+N +GQLG G T E P V+ L + I+CG + + A+++ +
Sbjct: 474 LYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPIAFIACGGNHSFAVSK---------S 524
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPNTIICQ-----------VSCGSVHVVALSECGLLQA 190
++ WG+N F +L Q VSCG V L+ G +
Sbjct: 525 GAIFGWGKN---TFGQLGLNDLNSRQFPTQLRTLRSLGVRYVSCGDDFSVFLTAGGGVFT 581
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEV 249
G +GQLG G +C PR++ KITQ++CG H+ A V G++
Sbjct: 582 CGAGTFGQLGHG-SCNNEILPRMVFELMG--------SKITQIACGRRHTLAFVPSRGKI 632
Query: 250 YTWGLGSVGQLG 261
Y +GL VGQLG
Sbjct: 633 YGFGLSGVGQLG 644
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 91/200 (45%), Gaps = 20/200 (10%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG N GQ G ++ P L L G P IACG H+ AV+ G
Sbjct: 474 LYAWGSNAYGQLGLGMTNEKVSTPT-LVQSLAGVPIAF------IACGGNHSFAVSKSGA 526
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F WG N FGQLG R+ P +++ L+S V+ +SCG + + G + T
Sbjct: 527 IFGWGKNTFGQLGLNDLNSRQFPTQLRTLRSLGVRYVSCGDDFSVFLTA----GGGVFTC 582
Query: 143 RLWVWGQ-NQGS----NFPRLFWGAFTPNTIICQVSCGSVHVVALSEC-GLLQAWGYNEY 196
+GQ GS PR+ + + I Q++CG H +A G + +G +
Sbjct: 583 GAGTFGQLGHGSCNNEILPRMVFELM--GSKITQIACGRRHTLAFVPSRGKIYGFGLSGV 640
Query: 197 GQLGRGITCEGLQGPRVIKG 216
GQLG GI P++++G
Sbjct: 641 GQLGIGIVG-NYNTPQIVRG 659
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 50/112 (44%), Gaps = 8/112 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
AI+ WG N GQ G +Q P +L + R+ ++CG + + + + G
Sbjct: 526 AIFGWGKNTFGQLGLNDLNS-----RQFPTQLRTLRS-LGVRY--VSCGDDFSVFLTAGG 577
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
+FT GA FGQLG G+ P V +L + I+CG T A R
Sbjct: 578 GVFTCGAGTFGQLGHGSCNNEILPRMVFELMGSKITQIACGRRHTLAFVPSR 629
>gi|444916088|ref|ZP_21236212.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444712767|gb|ELW53682.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 823
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 116/361 (32%), Positives = 160/361 (44%), Gaps = 50/361 (13%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ G + T +DG L+ WG N GQLGD + R P V VK+++ G +
Sbjct: 465 LVAGAKFTLFQKNDGKLWAWGHNFSGQLGDDSTVNRLTPVSVSTASLTDVKNVAAGGFHS 524
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNF--PRLFWGAFTPNTIICQVSCGS------VH 178
A+ S +LW WG N S R G+ ++ VS H
Sbjct: 525 LALG---------SDGKLWSWGSNSLSQLGVSRDTLGSRASPALVSGVSGVVAVAAGETH 575
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
+ + G + AWGYN YGQ+G G + V Y E L I V+ G+
Sbjct: 576 SLVVLSNGKVSAWGYNGYGQIGDGCS-------PVPTFYCSSPTEPTNLFSILGVAAGQN 628
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
HS A+ +G V+ WG + GQLG SL + P +V L+ + V G HS AL
Sbjct: 629 HSLALRSDGTVWAWGRNNSGQLGDGSLVDRTR---PVQVARLNRVV--SVVAGLYHSLAL 683
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP--NGVQLVACGHSH 356
S G ++AWG + +GQLG G TYF + + VP +GV VA G H
Sbjct: 684 RSDGTVWAWGDNGSGQLGDG--------------TYFGQMLPVQVPGLSGVVAVAAGGRH 729
Query: 357 TLVYMRDGRIHGWGYNSYGQAAN-EKSTYAWYPSPVDWCVGE---VRKLAAGGGHS-AVL 411
+L DG + WGYNS GQ + ++ + PSPV V +AAG HS AVL
Sbjct: 730 SLALRADGTVWAWGYNSNGQIGDGSDASIIYRPSPVKVLFSSQDVVMGVAAGDTHSVAVL 789
Query: 412 A 412
+
Sbjct: 790 S 790
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/355 (31%), Positives = 154/355 (43%), Gaps = 45/355 (12%)
Query: 68 ACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTA 127
A G +T DG+++TWGAN GQLGDGT R V VK ++ G
Sbjct: 43 AAGEAYTLIQRDDGSVWTWGANSGGQLGDGTTAYRLASAPVDFSNGMVVKRVAAGGSHAL 102
Query: 128 AIAEPRENDGTISTSRLWVWGQN-QGSNFPRLFWGAFTPNTI-------ICQVSCGSVHV 179
A+ +S LW WG+N G +F+P + + ++ + +
Sbjct: 103 AV---------LSDKTLWAWGRNGDGQLGVGSTTSSFSPVKVPGRTGVEVVAMAASTFNS 153
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
A+ G + WGYN YGQLG G T + Q V E L I VS G+YH
Sbjct: 154 AAVLSDGKVLTWGYNAYGQLGNGSTTD--QSSPV---------EVSALSDIKGVSVGKYH 202
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT 299
A+ G V+ WG + S + P++ L G + V+ G HS AL
Sbjct: 203 MLALRSGGTVWAWGF-NGSGQLGLGSGSNTQYNTPQQAAVLKG--VASVSAGDSHSLALR 259
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
G ++AWG + GQLG+G SF+ P+ +P L GV VA G H L
Sbjct: 260 WDGTVWAWGQNNQGQLGIG----SFTDRPSP-----VQVPRLT---GVVEVAAGQFHALA 307
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLAD 413
DG + WG+N GQ + + P V G V +AAG GHS AVL+D
Sbjct: 308 LRLDGTVWAWGFNGSGQLGDGTTLSRSSPVQVPGLTGVV-SVAAGDGHSVAVLSD 361
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 157/368 (42%), Gaps = 58/368 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N SGQ G +L L ++A G H+ A+ SDG
Sbjct: 481 LWAWGHNFSGQLGDDSTVNRLTPVSVSTASLTDVK--------NVAAGGFHSLALGSDGK 532
Query: 83 LFTWGANEFGQLGDGTEE-GRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
L++WG+N QLG + G + + S V + H +S
Sbjct: 533 LWSWGSNSLSQLGVSRDTLGSRASPALVSGVSGVVAVAAGETHSLV----------VLSN 582
Query: 142 SRLWVWGQNQG-------SNFPRLFWGAFTPNT---IICQVSCGSVHVVALSECGLLQAW 191
++ WG N S P + + T T I V+ G H +AL G + AW
Sbjct: 583 GKVSAWGYNGYGQIGDGCSPVPTFYCSSPTEPTNLFSILGVAAGQNHSLALRSDGTVWAW 642
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G N GQLG G + + +V + L ++ V G YHS A+ +G V+
Sbjct: 643 GRNNSGQLGDGSLVDRTRPVQVAR-----------LNRVVSVVAGLYHSLALRSDGTVWA 691
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG GQLG + ++LP +V L G+ VA GG HS AL + G ++AWG +
Sbjct: 692 WGDNGSGQLGDGTYFG---QMLPVQVPGLSGVVA--VAAGGRHSLALRADGTVWAWGYNS 746
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDGRIHG 368
GQ+G G +++ +R P+ V+ + V VA G +H++ + GR+
Sbjct: 747 NGQIGDG----------SDASIIYRPSPVKVLFSSQDVVMGVAAGDTHSVAVLSGGRVRT 796
Query: 369 WGYNSYGQ 376
WG N GQ
Sbjct: 797 WGQNDSGQ 804
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 161/380 (42%), Gaps = 59/380 (15%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLD-IACGHEHTAAVASD 80
+++ WG N GQ G +L P + +N + +A G H AV SD
Sbjct: 57 SVWTWGANSGGQLGDGTTAYRL---ASAPVDF------SNGMVVKRVAAGGSHALAVLSD 107
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
TL+ WG N GQLG G+ P KV V +++ +AA+ +S
Sbjct: 108 KTLWAWGRNGDGQLGVGSTTSSFSPVKVPGRTGVEVVAMAASTFNSAAV---------LS 158
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFTPNTI---------ICQVSCGSVHVVALSECGLLQAW 191
++ WG N + +L G+ T + I VS G H++AL G + AW
Sbjct: 159 DGKVLTWGYNA---YGQLGNGSTTDQSSPVEVSALSDIKGVSVGKYHMLALRSGGTVWAW 215
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G+N L +A L+ + VS G+ HS A+ +G V+
Sbjct: 216 GFNGS---------GQLGLGSGSNTQYNTPQQAAVLKGVASVSAGDSHSLALRWDGTVWA 266
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG + GQLG S P +V L G+ +VA G H+ AL G ++AWG +
Sbjct: 267 WGQNNQGQLGIGSFT---DRPSPVQVPRLTGVV--EVAAGQFHALALRLDGTVWAWGFNG 321
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWG 370
+GQLG G T R+ P+ V GV VA G H++ + DGR++ WG
Sbjct: 322 SGQLGDGT-------------TLSRSSPVQVPGLTGVVSVAAGDGHSVAVLSDGRVYTWG 368
Query: 371 YNSYGQAANEKSTYAWYPSP 390
NS GQ + +P+P
Sbjct: 369 RNSAGQLGDGSQDALPHPTP 388
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 115/257 (44%), Gaps = 35/257 (13%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQL---RIPKQLPPELFGCPAGANSRWLDIACGHEH 73
+ + + WGYN GQ G P + P LF L +A G H
Sbjct: 579 VLSNGKVSAWGYNGYGQIGDGCSPVPTFYCSSPTE-PTNLFSI--------LGVAAGQNH 629
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
+ A+ SDGT++ WG N GQLGDG+ R P +V +L V S+ G + + A+
Sbjct: 630 SLALRSDGTVWAWGRNNSGQLGDGSLVDRTRPVQVARLNR--VVSVVAGLYHSLAL---- 683
Query: 134 ENDGTISTSRLWVWGQN-QGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECGL 187
+DGT+ W WG N G ++G P + + V+ G H +AL G
Sbjct: 684 RSDGTV-----WAWGDNGSGQLGDGTYFGQMLPVQVPGLSGVVAVAAGGRHSLALRADGT 738
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWGYN GQ+G G + P +K F + + + V+ G+ HS AV G
Sbjct: 739 VWAWGYNSNGQIGDGSDASIIYRPSPVK--VLFSSQ----DVVMGVAAGDTHSVAVLSGG 792
Query: 248 EVYTWGLGSVGQLGHCS 264
V TWG GQLG+ +
Sbjct: 793 RVRTWGQNDSGQLGYAT 809
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 113/414 (27%), Positives = 168/414 (40%), Gaps = 69/414 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N+ GQ G G P Q+P L G +++A G H A+ DGT
Sbjct: 264 VWAWGQNNQGQLG-IGSFTDRPSPVQVP-RLTGV--------VEVAAGQFHALALRLDGT 313
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG N GQLGDGT R P +V L V S++ G + A+ +S
Sbjct: 314 VWAWGFNGSGQLGDGTTLSRSSPVQVPGLTG--VVSVAAGDGHSVAV---------LSDG 362
Query: 143 RLWVWGQNQGSNFPRLFWGAF---TPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
R++ WG+N A TP + CG+ + +C N
Sbjct: 363 RVYTWGRNSAGQLGDGSQDALPHPTPGQALLPFVCGNHRLEPEEQCD-----DGNSINGD 417
Query: 200 GRGITCEGLQGPRV----IKGYAKFLDEAPELE----------KITQVSCGEYHSAAVSE 245
G C G + IK A+ D+ + + ++ G +
Sbjct: 418 GCSALCLAESGSSLCGDGIKAAAEACDDGNLVNGDGCSFVCRLETPRLVAGAKFTLFQKN 477
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+++ WG GQLG S L P V +K+VA GG HS AL S G L+
Sbjct: 478 DGKLWAWGHNFSGQLGDDSTV---NRLTPVSVSTASLTDVKNVAAGGFHSLALGSDGKLW 534
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
+WG + QLG+ T P ++ +GV VA G +H+LV + +G+
Sbjct: 535 SWGSNSLSQLGVSRDTLGSRASP----------ALVSGVSGVVAVAAGETHSLVVLSNGK 584
Query: 366 IHGWGYNSYGQAANEKSTYAWYPSPVDWC--------VGEVRKLAAGGGHSAVL 411
+ WGYN YGQ + S P P +C + + +AAG HS L
Sbjct: 585 VSAWGYNGYGQIGDGCS-----PVPTFYCSSPTEPTNLFSILGVAAGQNHSLAL 633
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 114/258 (44%), Gaps = 40/258 (15%)
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGR----KHPEKVKQLQSEFVKSISCGAHCTAA 128
H+ V S+G + WG N +GQ+GDG P + L S + ++ G + + A
Sbjct: 575 HSLVVLSNGKVSAWGYNGYGQIGDGCSPVPTFYCSSPTEPTNLFS--ILGVAAGQNHSLA 632
Query: 129 IAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVS---------CGSVHV 179
+ +DGT+ W WG+N N +L G+ T QV+ G H
Sbjct: 633 L----RSDGTV-----WAWGRN---NSGQLGDGSLVDRTRPVQVARLNRVVSVVAGLYHS 680
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLD-EAPELEKITQVSCGEY 238
+AL G + AWG N GQLG G + + L + P L + V+ G
Sbjct: 681 LALRSDGTVWAWGDNGSGQLGDGTY------------FGQMLPVQVPGLSGVVAVAAGGR 728
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
HS A+ +G V+ WG S GQ+G S S P +V+ + VA G HS A+
Sbjct: 729 HSLALRADGTVWAWGYNSNGQIGDGSDASIIYRPSPVKVLFSSQDVVMGVAAGDTHSVAV 788
Query: 299 TSKGALYAWGGSQAGQLG 316
S G + WG + +GQLG
Sbjct: 789 LSGGRVRTWGQNDSGQLG 806
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 90/182 (49%), Gaps = 18/182 (9%)
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
+ + GE ++ ++G V+TWG S GQLG + L V +G+ +K VA G
Sbjct: 41 RAAAGEAYTLIQRDDGSVWTWGANSGGQLGDGTTA---YRLASAPVDFSNGMVVKRVAAG 97
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVA 351
G H+ A+ S L+AWG + GQLG+G T SFS + T GV++VA
Sbjct: 98 GSHALAVLSDKTLWAWGRNGDGQLGVGSTTSSFSPVKVPGRT------------GVEVVA 145
Query: 352 CGHS--HTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
S ++ + DG++ WGYN+YGQ N +T P V + +++ ++ G H
Sbjct: 146 MAASTFNSAAVLSDGKVLTWGYNAYGQLGNGSTTDQSSPVEVS-ALSDIKGVSVGKYHML 204
Query: 410 VL 411
L
Sbjct: 205 AL 206
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 97/242 (40%), Gaps = 25/242 (10%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
+ + G + + + G + WG N GQLG G T R+ F + +
Sbjct: 41 RAAAGEAYTLIQRDDGSVWTWGANSGGQLGDGTTAY-----RLASAPVDFSNGM----VV 91
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
+V+ G H+ AV + ++ WG GQLG S S P +V G+ + +A
Sbjct: 92 KRVAAGGSHALAVLSDKTLWAWGRNGDGQLGVGSTTS---SFSPVKVPGRTGVEVVAMAA 148
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
+S A+ S G + WG + GQLG G T S + + + + + +
Sbjct: 149 STFNSAAVLSDGKVLTWGYNAYGQLGNGSTTDQSSPVEVSALSDIKGVSV---------- 198
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
G H L G + WG+N GQ + Y +P V + V ++AG HS
Sbjct: 199 --GKYHMLALRSGGTVWAWGFNGSGQLGLGSGSNTQYNTPQQAAVLKGVASVSAGDSHSL 256
Query: 410 VL 411
L
Sbjct: 257 AL 258
>gi|363728661|ref|XP_416780.3| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC418578
[Gallus gallus]
Length = 1212
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 118/386 (30%), Positives = 183/386 (47%), Gaps = 45/386 (11%)
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
N + + I+CG EHTA V +G L+ +G+N++GQLG G++ + P VK L+ E K
Sbjct: 38 NDKPVHISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVRKPTCVKALKPEKTKLAV 97
Query: 121 CGAHCTAAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVH 178
CG + T E G S +L + + + F + + FT I Q++ GS
Sbjct: 98 CGRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERTTFHLISF--FTNQHKIKQLAAGSYT 155
Query: 179 VVALSECGLLQAWGYNEYGQLGRG-ITCEGLQGP-RVIKGYAKFLDEAPELEKITQVSCG 236
A++E G L WG N GQ+G TC + P +V G ++ +SCG
Sbjct: 156 SAAVTEDGQLFVWGDNSEGQIGLADKTCVSV--PCQVDVGKP-----------VSSISCG 202
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF--IKDVACGGVH 294
YHSA ++ +GE+YT+G G+LG Q + +P+ V+ GI + VACGG H
Sbjct: 203 YYHSAFITGDGELYTFGEPENGKLGLLPEQLKNSR-VPQPVL---GIMEKVNKVACGGEH 258
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGH 354
+ LT G +Y +G Q GQLG G T F +S + R+ + + V CG
Sbjct: 259 TVVLTETG-VYTFGLGQYGQLGHG--TLLFKTSVPKSVKHLRS-------HKIHNVTCGE 308
Query: 355 SHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV---DWCVGEVRKLAAGGGHSAVL 411
SHT V +G + +G +G+ + +A P ++ V +A GG H V
Sbjct: 309 SHTAVIAENGLMFTFGDGRHGKLGLGEENFANQFDPALCSNFLSFTVLLVACGGCHMLVF 368
Query: 412 A-------DACSLKELCEFRLAESVT 430
A + L+++ E RL +V+
Sbjct: 369 ATPRPKESEEILLEDIYESRLISTVS 394
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 89/190 (46%), Gaps = 30/190 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++VWG N GQ G + + +P Q+ G P + I+CG+ H+A + DG
Sbjct: 165 LFVWGDNSEGQIGLADK-TCVSVPCQVD---VGKPVSS------ISCGYYHSAFITGDGE 214
Query: 83 LFTWGANEFGQLGDGTEEGR--KHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
L+T+G E G+LG E+ + + P+ V + E V ++CG T + E +
Sbjct: 215 LYTFGEPENGKLGLLPEQLKNSRVPQPVLGIM-EKVNKVACGGEHTVVLTET-----GVY 268
Query: 141 TSRLWVWGQ-NQGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWG 192
T L +GQ G+ L + P ++ I V+CG H ++E GL+ +G
Sbjct: 269 TFGLGQYGQLGHGT----LLFKTSVPKSVKHLRSHKIHNVTCGESHTAVIAENGLMFTFG 324
Query: 193 YNEYGQLGRG 202
+G+LG G
Sbjct: 325 DGRHGKLGLG 334
>gi|295789057|ref|NP_001171422.1| X-linked retinitis pigmentosa GTPase regulator isoform 2 [Mus
musculus]
gi|26325790|dbj|BAC26649.1| unnamed protein product [Mus musculus]
Length = 972
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 114/367 (31%), Positives = 173/367 (47%), Gaps = 62/367 (16%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++CG EHTA V + L+ +G+N +GQLG G++ P +K L+ E VK +CG + T
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 137
Query: 127 AAIAEPRENDGTISTSRLWVW---GQNQG----------SNFPRLFWGAFTPNTIICQVS 173
+ST V+ G N+G F ++ + FTP I Q+S
Sbjct: 138 L-----------VSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVF--FTPADTIKQLS 184
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
G+ AL+E G L WG N GQ+G V G + I+ +
Sbjct: 185 AGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVG-----------KPISWI 233
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL-----PRRVVALDGIFIKDV 288
SCG YHSA V+ +GE+YT+G G+LG + ELL P+RV+ + I+ V
Sbjct: 234 SCGYYHSAFVTMDGELYTFGEPENGKLGLPN------ELLMNHRSPQRVLGIPERVIQ-V 286
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
ACGG H+ LT K +YA+G Q GQLGLG +F +E R + +
Sbjct: 287 ACGGGHTVVLTEK-VVYAFGLGQFGQLGLG----TFLFETSEPKIIER-----IKDQKIC 336
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQ--AANEKSTYAWYPSP-VDWCVGEVRKLAAGG 405
++CG +HT + G ++ +G +G+ E T ++P+ ++ V+ +A GG
Sbjct: 337 HISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGG 396
Query: 406 GHSAVLA 412
H V A
Sbjct: 397 CHMLVFA 403
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 124/278 (44%), Gaps = 29/278 (10%)
Query: 141 TSRLWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
T ++ +G+ + N P FW F + IC +SCG H ++ L +G N +GQL
Sbjct: 49 TGAVFTFGKTKFAENIPSKFW--FKNDIPIC-LSCGDEHTAIVTGNNKLYMFGSNNWGQL 105
Query: 200 GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ 259
G G + P IK A + EK+ +CG H+ ++ G VY G + GQ
Sbjct: 106 GLGSKA-AIIKPTCIK--------ALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQ 156
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LG + D++ + V IK ++ G S ALT G L+ WG + GQ+GL
Sbjct: 157 LGLGD--TDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGL-- 212
Query: 320 QTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ--A 377
+ +S IP+E + V + ++CG+ H+ DG ++ +G G+
Sbjct: 213 EDKSNVCIPHE----------VTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGL 262
Query: 378 ANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADAC 415
NE P V V ++A GGGH+ VL +
Sbjct: 263 PNELLMNHRSPQRVLGIPERVIQVACGGGHTVVLTEKV 300
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 89/195 (45%), Gaps = 38/195 (19%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+++WG N GQ G + + + IP ++ G W I+CG+ H+A V DG
Sbjct: 199 LFMWGDNSEGQIGLEDK-SNVCIPHEV-------TVGKPISW--ISCGYYHSAFVTMDGE 248
Query: 83 LFTWGANEFGQLGDGTEEGRKH--PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
L+T+G E G+LG E H P++V + E V ++CG T + E
Sbjct: 249 LYTFGEPENGKLGLPNELLMNHRSPQRVLGI-PERVIQVACGGGHTVVLTE--------- 298
Query: 141 TSRLWVWGQNQGSNFPRLFWGAF-----TPNTI-------ICQVSCGSVHVVALSECGLL 188
++ +G Q F +L G F P I IC +SCG H ++E GLL
Sbjct: 299 -KVVYAFGLGQ---FGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLL 354
Query: 189 QAWGYNEYGQLGRGI 203
+G +G+LG G+
Sbjct: 355 YTFGDGRHGKLGLGM 369
>gi|90657578|gb|ABD96878.1| hypothetical protein [Cleome spinosa]
Length = 393
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 156/362 (43%), Gaps = 57/362 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N G G + IP Q+ A AN + + A G H AV G
Sbjct: 59 LFTWGWNQRGTLGHPPETKTENIPSQVK-------ALANVKIVQAAIGGWHCLAVDDQGR 111
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ WG NE+GQ G+ E G+ E+ L+ + V C + T
Sbjct: 112 AYAWGGNEYGQCGE--EPGKDEMER--PLRRDIVIPKRCAPKLVVRQVAAGGTHSVVLTR 167
Query: 143 R--LWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
+W WGQ + + P G + ++ G+ H +AL E G L AWG N
Sbjct: 168 EGHVWSWGQPWPPGDIKQISIPVRVQGLEN----VRLIAVGAFHNLALEENGTLWAWGNN 223
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
EYGQLG G T Q P ++G + ++ G +HS A+++ GEVY WG
Sbjct: 224 EYGQLGTGDTQPRSQ-PIPVQGLDSL--------TLVDIAAGGWHSTALTDKGEVYGWGR 274
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
G G+LG K +LP++V L G I V+CGG HS ALT G ++++G G+
Sbjct: 275 GEHGRLGFGDNDKSSK-MLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGR 333
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ---------------LVACGHSHTLV 359
LG G + + + ++P+ + P Q +VACG HTL
Sbjct: 334 LGCGRKVTTGQPL---------DVPVKIPPPEGQFNDAAEDDDGKWVAKVVACGGRHTLA 384
Query: 360 YM 361
+
Sbjct: 385 IV 386
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 147/331 (44%), Gaps = 61/331 (18%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKH-PEKVKQLQS-EFVKSISCGAH 124
+ G ++ A+ DGTLFTWG N+ G LG E ++ P +VK L + + V++ G H
Sbjct: 43 VVSGSRNSLAICDDGTLFTWGWNQRGTLGHPPETKTENIPSQVKALANVKIVQAAIGGWH 102
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQ---------GSNFPRLFWGAFT------PNTII 169
C A + R + WG N+ R P ++
Sbjct: 103 CLAVDDQ----------GRAYAWGGNEYGQCGEEPGKDEMERPLRRDIVIPKRCAPKLVV 152
Query: 170 CQVSCGSVHVVALSECGLLQAWGY----NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAP 225
QV+ G H V L+ G + +WG + Q+ + +GL+ R+I
Sbjct: 153 RQVAAGGTHSVVLTREGHVWSWGQPWPPGDIKQISIPVRVQGLENVRLI----------- 201
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFI 285
+ G +H+ A+ ENG ++ WG GQLG Q + P V LD + +
Sbjct: 202 --------AVGAFHNLALEENGTLWAWGNNEYGQLGTGDTQPRSQ---PIPVQGLDSLTL 250
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
D+A GG HS ALT KG +Y WG + G+LG G +S ++P + + L+
Sbjct: 251 VDIAAGGWHSTALTDKGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVN--------LLAGE 302
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+ V+CG +H++ RDGRI +G +G+
Sbjct: 303 DIIQVSCGGTHSVALTRDGRIFSFGRGDHGR 333
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 107/263 (40%), Gaps = 42/263 (15%)
Query: 162 AFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFL 221
A P + VS GS + +A+ + G L WG+N+ G LG + P +K A
Sbjct: 34 ALEPYAVRSVVS-GSRNSLAICDDGTLFTWGWNQRGTLGHPPETKTENIPSQVKALANV- 91
Query: 222 DEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKEL--------- 272
KI Q + G +H AV + G Y WG GQ C + G E+
Sbjct: 92 -------KIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQ---CGEEPGKDEMERPLRRDIV 141
Query: 273 LPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESD 332
+P+R + ++ VA GG HS LT +G +++WG D
Sbjct: 142 IPKRCAPK--LVVRQVAAGGTHSVVLTREGHVWSWGQPWP-----------------PGD 182
Query: 333 TYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
+IP+ V V+L+A G H L +G + WG N YGQ + P PV
Sbjct: 183 IKQISIPVRVQGLENVRLIAVGAFHNLALEENGTLWAWGNNEYGQLGTGDTQPRSQPIPV 242
Query: 392 DWCVG-EVRKLAAGGGHSAVLAD 413
+ +AAGG HS L D
Sbjct: 243 QGLDSLTLVDIAAGGWHSTALTD 265
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 90/199 (45%), Gaps = 32/199 (16%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
IA G H A+ +GTL+ WG NE+GQLG G + R P V+ L S + I+ G +
Sbjct: 201 IAVGAFHNLALEENGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLDSLTLVDIAAGGWHS 260
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG------AFTPNTI-------ICQVS 173
A+ + E G WG+ + RL +G P + I QVS
Sbjct: 261 TALTDKGEVYG---------WGRGE---HGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVS 308
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRG---ITCEGLQGPRVIKGYAKFLDEAPELEK- 229
CG H VAL+ G + ++G ++G+LG G T + L P I ++A E +
Sbjct: 309 CGGTHSVALTRDGRIFSFGRGDHGRLGCGRKVTTGQPLDVPVKIPPPEGQFNDAAEDDDG 368
Query: 230 ---ITQVSCGEYHSAAVSE 245
V+CG H+ A+ E
Sbjct: 369 KWVAKVVACGGRHTLAIVE 387
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
V WG G GQLG L + D++ V AL+ ++ V G +S A+ G L+ WG
Sbjct: 7 VIAWGSGEDGQLG---LGTNDEKEWVCVVEALEPYAVRSVVSGSRNSLAICDDGTLFTWG 63
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHG 368
+Q G LG P+T++ + IP++ N+ I+ A G H L GR +
Sbjct: 64 WNQRGTLGHPPETKTEN-IPSQVKA-LANVKIV-------QAAIGGWHCLAVDDQGRAYA 114
Query: 369 WGYNSYGQAANEKSTYAW-YPSPVDWCVGE-------VRKLAAGGGHSAVL 411
WG N YGQ E P D + + VR++AAGG HS VL
Sbjct: 115 WGGNEYGQCGEEPGKDEMERPLRRDIVIPKRCAPKLVVRQVAAGGTHSVVL 165
>gi|6755348|ref|NP_035415.1| X-linked retinitis pigmentosa GTPase regulator isoform 3 [Mus
musculus]
gi|3258647|gb|AAC40190.1| retinitis pigmentosa GTPase regulator [Mus musculus]
Length = 746
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 112/361 (31%), Positives = 172/361 (47%), Gaps = 50/361 (13%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++CG EHTA V + L+ +G+N +GQLG G++ P +K L+ E VK +CG + T
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 137
Query: 127 -------AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHV 179
A N+G +L + + F ++ + FTP I Q+S G+
Sbjct: 138 LVSTDTGGVYAAGGNNEG-----QLGLGDTDDRDTFHQIVF--FTPADTIKQLSAGANTS 190
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
AL+E G L WG N GQ+G V G + I+ +SCG YH
Sbjct: 191 AALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVG-----------KPISWISCGYYH 239
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL-----PRRVVALDGIFIKDVACGGVH 294
SA V+ +GE+YT+G G+LG + ELL P+RV+ + I+ VACGG H
Sbjct: 240 SAFVTMDGELYTFGEPENGKLGLPN------ELLMNHRSPQRVLGIPERVIQ-VACGGGH 292
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGH 354
+ LT K +YA+G Q GQLGLG +F +E R + + ++CG
Sbjct: 293 TVVLTEK-VVYAFGLGQFGQLGLG----TFLFETSEPKIIER-----IKDQKICHISCGE 342
Query: 355 SHTLVYMRDGRIHGWGYNSYGQ--AANEKSTYAWYPSPV-DWCVGEVRKLAAGGGHSAVL 411
+HT + G ++ +G +G+ E T ++P+ ++ V+ +A GG H V
Sbjct: 343 NHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF 402
Query: 412 A 412
A
Sbjct: 403 A 403
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 125/276 (45%), Gaps = 29/276 (10%)
Query: 141 TSRLWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
T ++ +G+ + N P FW F + IC +SCG H ++ L +G N +GQL
Sbjct: 49 TGAVFTFGKTKFAENIPSKFW--FKNDIPIC-LSCGDEHTAIVTGNNKLYMFGSNNWGQL 105
Query: 200 GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ 259
G G ++ P IK A + EK+ +CG H+ ++ G VY G + GQ
Sbjct: 106 GLGSKAAIIK-PTCIK--------ALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQ 156
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LG + D++ + V IK ++ G S ALT G L+ WG + GQ+GL
Sbjct: 157 LGLG--DTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGL-- 212
Query: 320 QTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ--A 377
+ +S IP+E + V + ++CG+ H+ DG ++ +G G+
Sbjct: 213 EDKSNVCIPHE----------VTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGL 262
Query: 378 ANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLAD 413
NE P V V ++A GGGH+ VL +
Sbjct: 263 PNELLMNHRSPQRVLGIPERVIQVACGGGHTVVLTE 298
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 89/195 (45%), Gaps = 38/195 (19%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+++WG N GQ G + + + IP ++ G W I+CG+ H+A V DG
Sbjct: 199 LFMWGDNSEGQIGLEDK-SNVCIPHEV-------TVGKPISW--ISCGYYHSAFVTMDGE 248
Query: 83 LFTWGANEFGQLGDGTEEGRKH--PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
L+T+G E G+LG E H P++V + E V ++CG T + E
Sbjct: 249 LYTFGEPENGKLGLPNELLMNHRSPQRVLGI-PERVIQVACGGGHTVVLTE--------- 298
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFT-----PNTI-------ICQVSCGSVHVVALSECGLL 188
++ +G Q F +L G F P I IC +SCG H ++E GLL
Sbjct: 299 -KVVYAFGLGQ---FGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLL 354
Query: 189 QAWGYNEYGQLGRGI 203
+G +G+LG G+
Sbjct: 355 YTFGDGRHGKLGLGM 369
>gi|408501033|ref|YP_006864952.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465857|gb|AFU71386.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1190
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 122/380 (32%), Positives = 156/380 (41%), Gaps = 69/380 (18%)
Query: 76 AVASDGTLFTWGANEFGQLGDGT--EEGRKHPEKVKQ--------LQSEFVK-SISCGAH 124
AV SDG + WG N+ G+LGDGT E R P VKQ L ++F +S G+
Sbjct: 686 AVGSDGNAYAWGGNKKGELGDGTTSENARSTPVMVKQPDRKTYPDLPADFTYVQVSAGSQ 745
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT---------------PNTII 169
+ A+ S + WG+N RL G T +
Sbjct: 746 HSLAVG---------SDGNAYAWGRNDDG---RLGDGTSTDQHTPVRVKKPAGTSTDFTY 793
Query: 170 CQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK 229
QVS G H +AL G AWGYN GQLG G + + RV K D
Sbjct: 794 VQVSAGYHHSLALGSDGNAYAWGYNNSGQLGDGTSTDRATSVRVKKPAGTSTDFT----- 848
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG----IFI 285
QVS G +HS A+ +G Y WGL + GQLG + S D+ P +V G
Sbjct: 849 YVQVSAGAFHSLALGSDGNAYAWGLNNFGQLGDGT--STDRA-TPVKVGTPAGTPTDFTY 905
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
+ G +HS A+ S G YAWG + +GQLG + FS PN + RN PN
Sbjct: 906 AQIGAGYLHSLAVGSDGYAYAWGYNFSGQLGNNSKGGFFS--PNPNPVRVRNP---ASPN 960
Query: 346 GVQL------VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYP-------SPVD 392
V G H+L DG + WG+NS GQ N S + P SP D
Sbjct: 961 DADKGLKAVNVTAGFWHSLALGSDGNAYAWGFNSNGQLGNNSSKDSTVPVLVSDSASPTD 1020
Query: 393 WCVGEVRKLAAGGG-HSAVL 411
G L + G HS L
Sbjct: 1021 TSKGLKAVLVSTGQYHSLAL 1040
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 162/395 (41%), Gaps = 66/395 (16%)
Query: 24 YVWGYNHSGQTGRKGRERQLR----IPKQLPPELFGCP-AGANSRWLDIACGHEHTAAVA 78
Y WG N G+ G R + KQ P+ P A+ ++ ++ G +H+ AV
Sbjct: 694 YAWGGNKKGELGDGTTSENARSTPVMVKQ--PDRKTYPDLPADFTYVQVSAGSQHSLAVG 751
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQ---LQSEFVK-SISCGAHCTAAIAEPRE 134
SDG + WG N+ G+LGDGT + P +VK+ ++F +S G H + A+
Sbjct: 752 SDGNAYAWGRNDDGRLGDGTSTDQHTPVRVKKPAGTSTDFTYVQVSAGYHHSLALG---- 807
Query: 135 NDGTISTSRLWVWGQNQ------GSNFPRLF-------WGAFTPNTIICQVSCGSVHVVA 181
S + WG N G++ R G T T + QVS G+ H +A
Sbjct: 808 -----SDGNAYAWGYNNSGQLGDGTSTDRATSVRVKKPAGTSTDFTYV-QVSAGAFHSLA 861
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
L G AWG N +GQLG G + + R P Q+ G HS
Sbjct: 862 LGSDGNAYAWGLNNFGQLGDGTSTD-----RATPVKVGTPAGTPTDFTYAQIGAGYLHSL 916
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV---------ALDGIFIKDVACGG 292
AV +G Y WG GQLG+ S + G P V A G+ +V G
Sbjct: 917 AVGSDGYAYAWGYNFSGQLGNNS-KGGFFSPNPNPVRVRNPASPNDADKGLKAVNVTAGF 975
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLG-------PQTRSFSLIPNESDTYFRNIPILVVPN 345
HS AL S G YAWG + GQLG P S S P ++ + +
Sbjct: 976 WHSLALGSDGNAYAWGFNSNGQLGNNSSKDSTVPVLVSDSASPTDTSKGLKAV------- 1028
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANE 380
LV+ G H+L DG + WG N YGQ N
Sbjct: 1029 ---LVSTGQYHSLALGSDGNAYAWGDNGYGQLGNN 1060
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 148/367 (40%), Gaps = 73/367 (19%)
Query: 24 YVWGYNHSGQTG---RKGRERQLRIPKQLPPELFGCPAGANS--RWLDIACGHEHTAAVA 78
Y WGYN+SGQ G R +R+ K PAG ++ ++ ++ G H+ A+
Sbjct: 813 YAWGYNNSGQLGDGTSTDRATSVRVKK---------PAGTSTDFTYVQVSAGAFHSLALG 863
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKV------------KQLQSEFVKSISCGAHCT 126
SDG + WG N FGQLGDGT R P KV Q+ + ++ S++ G+
Sbjct: 864 SDGNAYAWGLNNFGQLGDGTSTDRATPVKVGTPAGTPTDFTYAQIGAGYLHSLAVGSDGY 923
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAF---TPNTI--------------- 168
A + WG N G F PN +
Sbjct: 924 A-----------------YAWGYNFSGQLGNNSKGGFFSPNPNPVRVRNPASPNDADKGL 966
Query: 169 -ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL 227
V+ G H +AL G AWG+N GQLG + + P ++ A D + L
Sbjct: 967 KAVNVTAGFWHSLALGSDGNAYAWGFNSNGQLGNNSSKDSTV-PVLVSDSASPTDTSKGL 1025
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+ + VS G+YHS A+ +G Y WG GQLG+ S+ +G R V + +F
Sbjct: 1026 KAVL-VSTGQYHSLALGSDGNAYAWGDNGYGQLGNNSIPTGSNNNEARSPVPVPVVFNLP 1084
Query: 288 VACGGVHSCALTSKGALYAWGGS-----QAGQLGLGPQTRSFSL--IPNESDTYFR--NI 338
GV GGS A Q G+ + ++L P +DT R +
Sbjct: 1085 PVITGVRFDTSPGTNLKSGDGGSVNVLTPAHQPGMVTVSVDYTLGGTPQTTDTSLRYTYL 1144
Query: 339 PILVVPN 345
P V+PN
Sbjct: 1145 PAGVLPN 1151
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 106/238 (44%), Gaps = 33/238 (13%)
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVI--KGYAKFLDEAPELEKITQVSCGE 237
+A+ G AWG N+ G+LG G T E + V+ + K + P QVS G
Sbjct: 685 LAVGSDGNAYAWGGNKKGELGDGTTSENARSTPVMVKQPDRKTYPDLPADFTYVQVSAGS 744
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV-----VALDGIFIKDVACGG 292
HS AV +G Y WG G+LG + S D+ P RV + D +++ V+ G
Sbjct: 745 QHSLAVGSDGNAYAWGRNDDGRLGDGT--STDQH-TPVRVKKPAGTSTDFTYVQ-VSAGY 800
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLI----PNESDTYFRNIPILVVPNGVQ 348
HS AL S G YAWG + +GQLG G T + + P + T F +
Sbjct: 801 HHSLALGSDGNAYAWGYNNSGQLGDGTSTDRATSVRVKKPAGTSTDFTYV---------- 850
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYP--------SPVDWCVGEV 398
V+ G H+L DG + WG N++GQ + ST P +P D+ ++
Sbjct: 851 QVSAGAFHSLALGSDGNAYAWGLNNFGQLGDGTSTDRATPVKVGTPAGTPTDFTYAQI 908
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 79/184 (42%), Gaps = 35/184 (19%)
Query: 222 DEAPELEKITQVSCGEY-------HSAAVSENGEVYTWGLGSVGQLGHCS---------- 264
D A + +QVS + S AV +G Y WG G+LG +
Sbjct: 659 DSARRGIRFSQVSASSFVSVTDFGFSLAVGSDGNAYAWGGNKKGELGDGTTSENARSTPV 718
Query: 265 -LQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRS 323
++ D++ P + D +++ V+ G HS A+ S G YAWG + G+LG G T
Sbjct: 719 MVKQPDRKTYPD--LPADFTYVQ-VSAGSQHSLAVGSDGNAYAWGRNDDGRLGDGTSTDQ 775
Query: 324 FSLI----PNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAAN 379
+ + P + T F + V+ G+ H+L DG + WGYN+ GQ +
Sbjct: 776 HTPVRVKKPAGTSTDFTYV----------QVSAGYHHSLALGSDGNAYAWGYNNSGQLGD 825
Query: 380 EKST 383
ST
Sbjct: 826 GTST 829
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQT---RSFSLIPNESDTYFRNIPILVVPNGVQLVA 351
S A+ S G YAWGG++ G+LG G + RS ++ + D + P L V+
Sbjct: 684 SLAVGSDGNAYAWGGNKKGELGDGTTSENARSTPVMVKQPDR--KTYPDLPADFTYVQVS 741
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVR-----KLAAGGG 406
G H+L DG + WG N G+ + ST P V G +++AG
Sbjct: 742 AGSQHSLAVGSDGNAYAWGRNDDGRLGDGTSTDQHTPVRVKKPAGTSTDFTYVQVSAGYH 801
Query: 407 HSAVL 411
HS L
Sbjct: 802 HSLAL 806
>gi|384245912|gb|EIE19404.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
Length = 598
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 105/337 (31%), Positives = 159/337 (47%), Gaps = 36/337 (10%)
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE--NDGTI 139
+L+TWG ++ GQ G G ++ PE V+ LQ + V + G++ +A + E G+
Sbjct: 38 SLYTWGRSDLGQTGSGRDQNSTAPEPVQALQGKDVVHAAGGSYNSAFVTRDGELYTTGSN 97
Query: 140 STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
+L V G+ R+ A N + V+CG H++A+ + G L AWG NEYGQL
Sbjct: 98 DARQLGVKGREVALEPIRV--SALEMNN-VHGVACGQGHMLAVVDNGHLAAWGSNEYGQL 154
Query: 200 GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ 259
G G PRV+K +V+ G HS A++ +G+VY++G GS G
Sbjct: 155 GTGEVGASAAQPRVLKRIRG--------AHFARVAAGATHSLALTSSGQVYSFGEGSFGA 206
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LGH + + K P V AL I +A G S A++ G ++ WG ++ GQLG G
Sbjct: 207 LGHGDVNNRAK---PTLVQALWPEAIVSIAAGEYFSAAVSLSGRVFTWGRNKYGQLGNG- 262
Query: 320 QTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAAN 379
E F P+ + VQ VACG H + R G ++ WG +S GQ
Sbjct: 263 ----------EFGNAFLPQPVPGIEQAVQ-VACGDHHCIALTRWGEVYTWGLHSSGQLGQ 311
Query: 380 EKSTYAW-------YPSPVDWCVGE-VRKLAAGGGHS 408
+ + PS VD + +R+++AG HS
Sbjct: 312 GSNLGSEALNGCLCSPSRVDSLADQSIRQVSAGARHS 348
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 120/418 (28%), Positives = 178/418 (42%), Gaps = 62/418 (14%)
Query: 18 PAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAV 77
PA S++Y WG + GQTG GR++ P+ + A + A G ++A V
Sbjct: 34 PAVSSLYTWGRSDLGQTG-SGRDQNSTAPEPVQ-------ALQGKDVVHAAGGSYNSAFV 85
Query: 78 ASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG 137
DG L+T G+N+ QLG E P +V L+ V ++CG A+
Sbjct: 86 TRDGELYTTGSNDARQLGVKGREVALEPIRVSALEMNNVHGVACGQGHMLAV-------- 137
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG-----AFTPNTI-------ICQVSCGSVHVVALSEC 185
+ L WG N+ + +L G A P + +V+ G+ H +AL+
Sbjct: 138 -VDNGHLAAWGSNE---YGQLGTGEVGASAAQPRVLKRIRGAHFARVAAGATHSLALTSS 193
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAK-FLDEAPELEKITQVSCGEYHSAAVS 244
G + ++G +G LG G + AK L +A E I ++ GEY SAAVS
Sbjct: 194 GQVYSFGEGSFGALGHGD----------VNNRAKPTLVQALWPEAIVSIAAGEYFSAAVS 243
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
+G V+TWG GQLG+ LP+ V ++ VACG H ALT G +
Sbjct: 244 LSGRVFTWGRNKYGQLGNGEF---GNAFLPQPVPGIEQAV--QVACGDHHCIALTRWGEV 298
Query: 305 YAWGGSQAGQLGLGPQTRSFSL-----IPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
Y WG +GQLG G S +L P+ D+ + ++ V+ G H+
Sbjct: 299 YTWGLHSSGQLGQGSNLGSEALNGCLCSPSRVDS--------LADQSIRQVSAGARHSFF 350
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACS 416
++ G G N GQ A + P+ V G +R A G HS + D S
Sbjct: 351 VSPGEQLWGAGANDEGQLALQSVPSVALPTRVPGLPGLPMRFAVAAGDHSIAVLDESS 408
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 135/304 (44%), Gaps = 45/304 (14%)
Query: 23 IYVWGYNHSGQ--TGRKGRER-QLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+ WG N GQ TG G Q R+ K++ + + +A G H+ A+ S
Sbjct: 143 LAAWGSNEYGQLGTGEVGASAAQPRVLKRI----------RGAHFARVAAGATHSLALTS 192
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
G ++++G FG LG G R P V+ L E + SI+ G + +AA++
Sbjct: 193 SGQVYSFGEGSFGALGHGDVNNRAKPTLVQALWPEAIVSIAAGEYFSAAVSL-------- 244
Query: 140 STSRLWVWGQNQGSNFPR-LFWGAFTPNTI-----ICQVSCGSVHVVALSECGLLQAWGY 193
+ R++ WG+N+ F AF P + QV+CG H +AL+ G + WG
Sbjct: 245 -SGRVFTWGRNKYGQLGNGEFGNAFLPQPVPGIEQAVQVACGDHHCIALTRWGEVYTWGL 303
Query: 194 NEYGQLGRG--ITCEGLQG----PRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ GQLG+G + E L G P + A + I QVS G HS VS
Sbjct: 304 HSSGQLGQGSNLGSEALNGCLCSPSRVDSLAD--------QSIRQVSAGARHSFFVSPGE 355
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
+++ G GQL +LQS LP RV L G+ ++ G HS A+ + +
Sbjct: 356 QLWGAGANDEGQL---ALQSVPSVALPTRVPGLPGLPMRFAVAAGDHSIAVLDESSGLQN 412
Query: 308 GGSQ 311
GG Q
Sbjct: 413 GGLQ 416
>gi|270001314|gb|EEZ97761.1| hect domain and RLD 2-like protein [Tribolium castaneum]
Length = 3894
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 177/408 (43%), Gaps = 102/408 (25%)
Query: 23 IYVWGYNHSGQTG-RKGRERQLRIPK----QLPP-----------------ELFGCPAGA 60
++VWG N Q G KG + +L + QL P +L+ C G
Sbjct: 2057 VFVWGLNDKDQLGGMKGSKVKLPVQSDFLSQLWPIHIAGGSKSLFIVSHEGKLYACGEGT 2116
Query: 61 NSRW------------------------LDIACGHEHTAAVASDGTLFTWGANEFGQLGD 96
N R + + G +H A+ DG +F+WG E G+LG
Sbjct: 2117 NGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGH 2176
Query: 97 GTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQ----- 151
G P+ ++ L+S+ ++ I+CG+ +AAI S+ L+ WG +
Sbjct: 2177 GNRLNLDKPKMIEALRSKKIRDIACGSSHSAAIT---------SSGELYTWGLGEYGRLG 2227
Query: 152 -GSNFPRLFWGAFTPNTI-------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGR 201
G N +L P I I QV+CGS +AL++ G + +WG ++G+LGR
Sbjct: 2228 HGDNITQL-----KPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGR 2282
Query: 202 GITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG 261
G EG P I+ ++ Q+ CG S A+++ GEV+TWG G +LG
Sbjct: 2283 G-GSEGCNIPHNIERLNAL--------EVVQIECGAQFSLALTKTGEVWTWGKGDYFRLG 2333
Query: 262 HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQ- 320
H S Q K P + +L + VA G +H A+T G +YAWG + GQ G G
Sbjct: 2334 HGSDQHVRK---PTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTI 2390
Query: 321 -TRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY-MRDGRI 366
R +L+ D + + VACG SH++ + ++D ++
Sbjct: 2391 VNRKPALVHGLEDVH------------INRVACGSSHSIAWTLQDTQV 2426
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 136/295 (46%), Gaps = 35/295 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A + +Y WG G+ G G PK + A +DIACG H+AA
Sbjct: 3133 LSADNDVYSWGEGDDGKLGH-GNRLACETPKLIE-------ALQGYEIIDIACGGAHSAA 3184
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ S G L+TWG +G+LG G E + P+ +++L V ++CG+ + +++
Sbjct: 3185 ITSTGQLYTWGKGRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDN 3244
Query: 137 GTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
+W WG R G P I + +V CGS VAL+ G +
Sbjct: 3245 -------VWSWGDGDYGKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSV 3297
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG +Y +LG G T E ++ P+ + A + +KI ++ G H A S+ GE
Sbjct: 3298 YTWGKGDYHRLGHG-TGEHVRRPKKVA--------ALQGKKIISIATGSLHCVACSDEGE 3348
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
V+TWG GQLG + + + PR V AL G I +VACG H+ A ++ A
Sbjct: 3349 VFTWGDNDEGQLGDDTTNAIQR---PRLVSALQGKKITNVACGSAHTLAWSTNNA 3400
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 154/327 (47%), Gaps = 51/327 (15%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P L + + + G +H A+++D +++WG + G+LG G + P+ +
Sbjct: 3105 LVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLACETPKLI 3164
Query: 109 KQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFT 164
+ LQ + I+CG +AAI ST +L+ WG+ + + RL G
Sbjct: 3165 EALQGYEIIDIACGGAHSAAIT---------STGQLYTWGKGR---YGRLGHGDSEDQLK 3212
Query: 165 PNTI-------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIK 215
P I + V+CGS + +++ + +WG +YG+LGRG +G + P+ I+
Sbjct: 3213 PKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG-GSDGCKVPKKIE 3271
Query: 216 GYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPR 275
A + +V CG S A++ +G VYTWG G +LGH +G+ P+
Sbjct: 3272 SLAGL--------GVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGH---GTGEHVRRPK 3320
Query: 276 RVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYF 335
+V AL G I +A G +H A + +G ++ WG + GQLG +++
Sbjct: 3321 KVAALQGKKIISIATGSLHCVACSDEGEVFTWGDNDEGQLG------------DDTTNAI 3368
Query: 336 RNIPILVVPNGVQL--VACGHSHTLVY 360
+ ++ G ++ VACG +HTL +
Sbjct: 3369 QRPRLVSALQGKKITNVACGSAHTLAW 3395
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 179/406 (44%), Gaps = 64/406 (15%)
Query: 22 AIYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
IY WG+NH GQ G G E +++IP C A + R + + G + AV +D
Sbjct: 3032 TIYGWGHNHRGQLG--GIEGAKVKIPTP-------CEALSTLRPVQLVGGEQTLFAVTAD 3082
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDG 137
G ++ G G+LG G + P ++ +Q F+K I+ G HC A A +ND
Sbjct: 3083 GKVYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSA---DND- 3138
Query: 138 TISTSRLWVWGQNQGSNF---PRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
++ WG+ RL TP I I ++CG H A++ G
Sbjct: 3139 ------VYSWGEGDDGKLGHGNRL--ACETPKLIEALQGYEIIDIACGGAHSAAITSTGQ 3190
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSE 245
L WG YG+LG G + + L+ P++I+ + K+ V+C G+ + +++
Sbjct: 3191 LYTWGKGRYGRLGHGDSEDQLK-PKLIEELVGY--------KVIDVACGSGDAQTLCITD 3241
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+ V++WG G G+LG D +P+++ +L G+ + V CG S ALT G++Y
Sbjct: 3242 DDNVWSWGDGDYGKLGR---GGSDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVY 3298
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRD 363
WG +LG G + + R + G ++ +A G H + +
Sbjct: 3299 TWGKGDYHRLGHG------------TGEHVRRPKKVAALQGKKIISIATGSLHCVACSDE 3346
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
G + WG N GQ ++ + P V G ++ +A G H+
Sbjct: 3347 GEVFTWGDNDEGQLGDDTTNAIQRPRLVSALQGKKITNVACGSAHT 3392
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 112/239 (46%), Gaps = 42/239 (17%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHE--HT 74
I + +Y WG G+ GR G + QL P+L G R + +ACG T
Sbjct: 2209 ITSSGELYTWGL---GEYGRLGHGDNI---TQLKPKLIKSLVG--HRIVQVACGSRDAQT 2260
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
A+ +G +F+WG +FG+LG G EG P +++L + V I CGA + A+ +
Sbjct: 2261 LALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIERLNALEVVQIECGAQFSLALTK--- 2317
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGA----FTPNTI-------ICQVSCGSVHVVALS 183
T +W WG+ ++ RL G+ P I + V+ G++H +A++
Sbjct: 2318 ------TGEVWTWGK---GDYFRLGHGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVT 2368
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
+ G + AWG N++GQ G G T + P ++ G E I +V+CG HS A
Sbjct: 2369 DTGQVYAWGDNDHGQQGNGTTIVN-RKPALVHGL--------EDVHINRVACGSSHSIA 2418
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 117/244 (47%), Gaps = 30/244 (12%)
Query: 143 RLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
R++VWG N +GS F ++ GS + +S G L A G
Sbjct: 2056 RVFVWGLNDKDQLGGMKGSKVKLPVQSDFLSQLWPIHIAGGSKSLFIVSHEGKLYACGEG 2115
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
G+LG G + + PR I ++++ ++K+ V G H+ A++ +G+V++WG
Sbjct: 2116 TNGRLGLGHS-NNVPYPRPIPFLSQYV-----IKKVA-VHSGGKHAMALTLDGKVFSWGE 2168
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
G G+LGH + + DK P+ + AL I+D+ACG HS A+TS G LY WG + G+
Sbjct: 2169 GEDGKLGHGNRLNLDK---PKMIEALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYGR 2225
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRDGRIHGWGYN 372
LG G N + + I LV VQ VACG + TL +G + WG
Sbjct: 2226 LGHG---------DNITQLKPKLIKSLVGHRIVQ-VACGSRDAQTLALTDEGWVFSWGDG 2275
Query: 373 SYGQ 376
+G+
Sbjct: 2276 DFGK 2279
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 88/192 (45%), Gaps = 16/192 (8%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
K V+ G H A+S + +VY+WG G G+LGH + + + P+ + AL G I D+
Sbjct: 3119 KKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLACET---PKLIEALQGYEIIDI 3175
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
ACGG HS A+TS G LY WG + G+LG G + D + +V V
Sbjct: 3176 ACGGAHSAAITSTGQLYTWGKGRYGRLGHG----------DSEDQLKPKLIEELVGYKVI 3225
Query: 349 LVAC--GHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGG 405
VAC G + TL D + WG YG+ S P ++ G V K+ G
Sbjct: 3226 DVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPKKIESLAGLGVIKVECGS 3285
Query: 406 GHSAVLADACSL 417
S L + S+
Sbjct: 3286 QFSVALTRSGSV 3297
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 101/227 (44%), Gaps = 27/227 (11%)
Query: 190 AWGYNEYGQLGRGITCEGLQGPRV-IKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG N+ QLG G++G +V + + FL + + ++ G VS G+
Sbjct: 2059 VWGLNDKDQLG------GMKGSKVKLPVQSDFLSQLWPI----HIAGGSKSLFIVSHEGK 2108
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHSCALTSKGALYA 306
+Y G G+ G+LG L + PR + L IK VA GG H+ ALT G +++
Sbjct: 2109 LYACGEGTNGRLG---LGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFS 2165
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRI 366
WG + G+LG G + +L + R+ ++ +ACG SH+ G +
Sbjct: 2166 WGEGEDGKLGHGNR---LNLDKPKMIEALRS-------KKIRDIACGSSHSAAITSSGEL 2215
Query: 367 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLA 412
+ WG YG+ + + P + VG + ++A G + LA
Sbjct: 2216 YTWGLGEYGRLGHGDNITQLKPKLIKSLVGHRIVQVACGSRDAQTLA 2262
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 80/218 (36%), Gaps = 62/218 (28%)
Query: 246 NGEVYTWGLGSVGQLG--------------------HCSLQSGDKEL------------- 272
+G +Y WG GQLG L G++ L
Sbjct: 3030 SGTIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLVGGEQTLFAVTADGKVYATG 3089
Query: 273 ----------------LPRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWGGSQAGQ 314
+P + ++ +FIK +A GG H AL++ +Y+WG G+
Sbjct: 3090 YGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGK 3149
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LG G + + E+ + I I ACG +H+ G+++ WG Y
Sbjct: 3150 LGHGNRLACETPKLIEALQGYEIIDI----------ACGGAHSAAITSTGQLYTWGKGRY 3199
Query: 375 GQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
G+ + S P ++ VG +V +A G G + L
Sbjct: 3200 GRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTL 3237
>gi|269125261|ref|YP_003298631.1| regulator of chromosome condensation RCC1 [Thermomonospora curvata
DSM 43183]
gi|268310219|gb|ACY96593.1| regulator of chromosome condensation RCC1 [Thermomonospora curvata
DSM 43183]
Length = 443
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 167/402 (41%), Gaps = 45/402 (11%)
Query: 9 ETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIA 68
E P D ++ G N +GQ GR+ RE L L P L G + +A
Sbjct: 39 EAPPPGDRAHGPGEVWSSGLNENGQLGRESREMDL----SLGPVLGLGGKGRLRNVVAVA 94
Query: 69 CGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
G H+ AV SDG + WGAN+ GQLGDGT +HP V+ S H A
Sbjct: 95 AGGRHSLAVLSDGRVVAWGANDHGQLGDGTRRDSRHPVLVRA-------PGSGKGHLRGA 147
Query: 129 IAEPREND---GTISTSRLWVWGQNQGSN-------FPRLFWGAFTPN-----TIICQVS 173
+A ++D + R+ WG+ P L P+ T + Q++
Sbjct: 148 VAVAADSDFSMALLKDGRVVTWGKGDAGQRGIGRKEAPLLPTVVLRPDGRKPLTDVVQIA 207
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
+ L + G + AWG N+YG +G G + R + + L+ L ++++
Sbjct: 208 ADGRTELVLRKDGSVLAWGANDYGMVGDGTRKQ-----RSLPVRVRGLNGRRWLSGVSKI 262
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI----FIKDVA 289
+ G H A+ +G V WG +GQLG+ + +P+ V + G I ++
Sbjct: 263 AIGGQHGLALLRDGRVVAWGRNELGQLGNGTRTD---STVPKPVSGVGGKGELSGIVAIS 319
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
H+ ALT L AWG + AGQLG G + +L + + P+L GV
Sbjct: 320 AAEKHNFALTKNATLVAWGNNTAGQLGDG----TLTLRDTPVNVVGTHGPLL---QGVAQ 372
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
V G +H + + DG WG GQ K + P P+
Sbjct: 373 VHAGEAHGVAILSDGSALSWGAGRKGQLGWGKRLHRSRPGPL 414
>gi|298714154|emb|CBJ33856.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 669
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 118/400 (29%), Positives = 177/400 (44%), Gaps = 48/400 (12%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ CG +H A + G +FTWG FG+LG G EG + P +++ L+ ++CG T
Sbjct: 276 VCCGGQHAAVLTDCGEIFTWGRGGFGRLGHGNREGLESPRRIEALEGIPCVQVACGFAYT 335
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAF----TPNTI------ICQVSCGS 176
AA+ ++ L+ WG + RL G TP+ + + +V GS
Sbjct: 336 AAVT---------ASGELYTWGAGENG---RLGLGDVADRHTPSRVEGLHSKVKEVYAGS 383
Query: 177 VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG 236
VH L+ G + A+G +EY G E + PR+I F + L + V G
Sbjct: 384 VHSCVLTREGTVYAFGKHEYTGHG---DHEDVLDPRLIP---TFSGGSGALVRQISVGPG 437
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKEL-------LPRRVVALDGIFIKDVA 289
YH+ A++ G+VY WG V QLG + + + + P+ V +L G+ I V
Sbjct: 438 GYHTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVGMNIVKVV 497
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLG-PQTRSFSLIPNESDTYFRNIPILV---VPN 345
G HS ALT G LY G + GQLGLG PQ NE F+ L+
Sbjct: 498 AGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQ----GFPQNERGHPFQADFCLIDRLQHL 553
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG---EVRKLA 402
++ +ACG H++ +G + +G GQ +E +T +P V E+ +A
Sbjct: 554 KIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTREDFPRLVQALKSTRREIMHVA 613
Query: 403 AGGGHSAVLADACSLKELCEFRLAESVTLSNASEIEDVAS 442
G + VLA + L F + SV N EDV S
Sbjct: 614 CGNNCTLVLAGGVAFPTL--FEMTASVVRGNPRLWEDVES 651
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 115/365 (31%), Positives = 166/365 (45%), Gaps = 63/365 (17%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
I+ WG G+ G RE L P+++ L G P + +ACG +TAAV + G
Sbjct: 292 IFTWGRGGFGRLGHGNRE-GLESPRRIEA-LEGIPC------VQVACGFAYTAAVTASGE 343
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWGA E G+LG G R P +V+ L S+ VK + G+ + + +GT+
Sbjct: 344 LYTWGAGENGRLGLGDVADRHTPSRVEGLHSK-VKEVYAGSVHSCVLT----REGTV--- 395
Query: 143 RLWVWGQNQGSNF--------PRL---FWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
+ +G+++ + PRL F G V G H +AL+ G + AW
Sbjct: 396 --YAFGKHEYTGHGDHEDVLDPRLIPTFSGGSGALVRQISVGPGGYHTMALTCQGQVYAW 453
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE-----KITQVSCGEYHSAAVSEN 246
G+N QLG G PR ++G A FL +E I +V G HSAA++ +
Sbjct: 454 GHNRVAQLGIG---NSFTVPRNMEG-AYFLPSPQLVESLVGMNIVKVVAGWGHSAALTVD 509
Query: 247 GEVYTWGLGSVGQLGHCSLQ-----------SGDKELLPRRVVALDGIFIKDVACGGVHS 295
G++Y G GQLG S Q D L+ R L + IK +ACGG HS
Sbjct: 510 GQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQADFCLIDR----LQHLKIKQIACGGEHS 565
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTR-SFSLIPNESDTYFRNIPILVVPNGVQLVACGH 354
A+ G ++++G Q GQLG TR F + + R I VACG+
Sbjct: 566 VAVAENGEVWSFGAGQKGQLGHESTTREDFPRLVQALKSTRREI---------MHVACGN 616
Query: 355 SHTLV 359
+ TLV
Sbjct: 617 NCTLV 621
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 120/258 (46%), Gaps = 39/258 (15%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ QV CG H L++CG + WG +G+LG G EGL+ PR I EA E
Sbjct: 273 VQQVCCGGQHAAVLTDCGEIFTWGRGGFGRLGHG-NREGLESPRRI--------EALEGI 323
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
QV+CG ++AAV+ +GE+YTWG G G+LG L P RV L +K+V
Sbjct: 324 PCVQVACGFAYTAAVTASGELYTWGAGENGRLG---LGDVADRHTPSRVEGLHSK-VKEV 379
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPN---ESDTYFRNIPILVVPN 345
G VHSC LT +G +YA+G + G LIP S R I
Sbjct: 380 YAGSVHSCVLTREGTVYAFGKHEYTGHGDHEDVLDPRLIPTFSGGSGALVRQIS------ 433
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA---------NEKSTYAWYPSP--VDWC 394
V G HT+ G+++ WG+N Q N + Y + PSP V+
Sbjct: 434 ----VGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAY-FLPSPQLVESL 488
Query: 395 VG-EVRKLAAGGGHSAVL 411
VG + K+ AG GHSA L
Sbjct: 489 VGMNIVKVVAGWGHSAAL 506
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 79/187 (42%), Gaps = 13/187 (6%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK---ELLPRRVVALDGIF 284
E++T G Y + + + +G V H + G + ++ P V L G+
Sbjct: 213 EEVTWAHGGLYEAFQALADPRRVVFAMGVVDDGPHHEVGEGGEGWSDVSPVVVQGLLGLS 272
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP 344
++ V CGG H+ LT G ++ WG G+LG G + E R I L
Sbjct: 273 VQQVCCGGQHAAVLTDCGEIFTWGRGGFGRLGHGNR---------EGLESPRRIEALEGI 323
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAG 404
VQ VACG ++T G ++ WG G+ PS V+ +V+++ AG
Sbjct: 324 PCVQ-VACGFAYTAAVTASGELYTWGAGENGRLGLGDVADRHTPSRVEGLHSKVKEVYAG 382
Query: 405 GGHSAVL 411
HS VL
Sbjct: 383 SVHSCVL 389
>gi|189241718|ref|XP_968558.2| PREDICTED: similar to hect domain and RLD 2 [Tribolium castaneum]
Length = 4733
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 177/408 (43%), Gaps = 102/408 (25%)
Query: 23 IYVWGYNHSGQTG-RKGRERQLRIPK----QLPP-----------------ELFGCPAGA 60
++VWG N Q G KG + +L + QL P +L+ C G
Sbjct: 2896 VFVWGLNDKDQLGGMKGSKVKLPVQSDFLSQLWPIHIAGGSKSLFIVSHEGKLYACGEGT 2955
Query: 61 NSRW------------------------LDIACGHEHTAAVASDGTLFTWGANEFGQLGD 96
N R + + G +H A+ DG +F+WG E G+LG
Sbjct: 2956 NGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGH 3015
Query: 97 GTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQ----- 151
G P+ ++ L+S+ ++ I+CG+ +AAI S+ L+ WG +
Sbjct: 3016 GNRLNLDKPKMIEALRSKKIRDIACGSSHSAAIT---------SSGELYTWGLGEYGRLG 3066
Query: 152 -GSNFPRLFWGAFTPNTI-------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGR 201
G N +L P I I QV+CGS +AL++ G + +WG ++G+LGR
Sbjct: 3067 HGDNITQL-----KPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGR 3121
Query: 202 GITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG 261
G EG P I+ ++ Q+ CG S A+++ GEV+TWG G +LG
Sbjct: 3122 G-GSEGCNIPHNIERLNAL--------EVVQIECGAQFSLALTKTGEVWTWGKGDYFRLG 3172
Query: 262 HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQ- 320
H S Q K P + +L + VA G +H A+T G +YAWG + GQ G G
Sbjct: 3173 HGSDQHVRK---PTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTI 3229
Query: 321 -TRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY-MRDGRI 366
R +L+ D + + VACG SH++ + ++D ++
Sbjct: 3230 VNRKPALVHGLEDVH------------INRVACGSSHSIAWTLQDTQV 3265
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 136/295 (46%), Gaps = 35/295 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A + +Y WG G+ G G PK + A +DIACG H+AA
Sbjct: 3972 LSADNDVYSWGEGDDGKLGH-GNRLACETPKLIE-------ALQGYEIIDIACGGAHSAA 4023
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ S G L+TWG +G+LG G E + P+ +++L V ++CG+ + +++
Sbjct: 4024 ITSTGQLYTWGKGRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDN 4083
Query: 137 GTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
+W WG R G P I + +V CGS VAL+ G +
Sbjct: 4084 -------VWSWGDGDYGKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSV 4136
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG +Y +LG G T E ++ P+ + A + +KI ++ G H A S+ GE
Sbjct: 4137 YTWGKGDYHRLGHG-TGEHVRRPKKVA--------ALQGKKIISIATGSLHCVACSDEGE 4187
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
V+TWG GQLG + + + PR V AL G I +VACG H+ A ++ A
Sbjct: 4188 VFTWGDNDEGQLGDDTTNAIQR---PRLVSALQGKKITNVACGSAHTLAWSTNNA 4239
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 154/327 (47%), Gaps = 51/327 (15%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P L + + + G +H A+++D +++WG + G+LG G + P+ +
Sbjct: 3944 LVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLACETPKLI 4003
Query: 109 KQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFT 164
+ LQ + I+CG +AAI ST +L+ WG+ + + RL G
Sbjct: 4004 EALQGYEIIDIACGGAHSAAIT---------STGQLYTWGKGR---YGRLGHGDSEDQLK 4051
Query: 165 PNTI-------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIK 215
P I + V+CGS + +++ + +WG +YG+LGRG +G + P+ I+
Sbjct: 4052 PKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG-GSDGCKVPKKIE 4110
Query: 216 GYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPR 275
A + +V CG S A++ +G VYTWG G +LGH +G+ P+
Sbjct: 4111 SLAGL--------GVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGH---GTGEHVRRPK 4159
Query: 276 RVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYF 335
+V AL G I +A G +H A + +G ++ WG + GQLG +++
Sbjct: 4160 KVAALQGKKIISIATGSLHCVACSDEGEVFTWGDNDEGQLG------------DDTTNAI 4207
Query: 336 RNIPILVVPNGVQL--VACGHSHTLVY 360
+ ++ G ++ VACG +HTL +
Sbjct: 4208 QRPRLVSALQGKKITNVACGSAHTLAW 4234
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 136/283 (48%), Gaps = 42/283 (14%)
Query: 48 QLPPELFGCPAGANSRWLDIACGHE--HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHP 105
Q P E+ G +G N + IA E H A+ D +++WG + G+LG G ++ P
Sbjct: 502 QCPQEMTGL-SGIN--MIKIAAHPEGKHYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEP 558
Query: 106 EKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGA--- 162
++ L+ + + + CG +AAI+ + L+ WG+ N+ RL G
Sbjct: 559 TLIQALKGKDIIDVECGGTYSAAIS---------ANGALYTWGR---GNYGRLGHGTAED 606
Query: 163 -FTPNTI-------ICQVSCGSV--HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPR 212
TP I I +V+CGS H + ++ G + +WG +YG+LGRG +G + PR
Sbjct: 607 CLTPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLGRG-GSDGSKLPR 665
Query: 213 VIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKEL 272
+I+ KI QV CG S A+SE+G VYTWG G +LGH + +
Sbjct: 666 LIEKLQNV--------KIVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGH---PTEENVR 714
Query: 273 LPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
P V L + V+ G H ALT +G +Y WG ++ Q+
Sbjct: 715 FPEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYGWGKNENKQI 757
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 179/406 (44%), Gaps = 64/406 (15%)
Query: 22 AIYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
IY WG+NH GQ G G E +++IP C A + R + + G + AV +D
Sbjct: 3871 TIYGWGHNHRGQLG--GIEGAKVKIPTP-------CEALSTLRPVQLVGGEQTLFAVTAD 3921
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDG 137
G ++ G G+LG G + P ++ +Q F+K I+ G HC A A +ND
Sbjct: 3922 GKVYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSA---DND- 3977
Query: 138 TISTSRLWVWGQNQGSNF---PRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
++ WG+ RL TP I I ++CG H A++ G
Sbjct: 3978 ------VYSWGEGDDGKLGHGNRL--ACETPKLIEALQGYEIIDIACGGAHSAAITSTGQ 4029
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSE 245
L WG YG+LG G + + L+ P++I+ + K+ V+C G+ + +++
Sbjct: 4030 LYTWGKGRYGRLGHGDSEDQLK-PKLIEELVGY--------KVIDVACGSGDAQTLCITD 4080
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+ V++WG G G+LG D +P+++ +L G+ + V CG S ALT G++Y
Sbjct: 4081 DDNVWSWGDGDYGKLGR---GGSDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVY 4137
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRD 363
WG +LG G + + R + G ++ +A G H + +
Sbjct: 4138 TWGKGDYHRLGHG------------TGEHVRRPKKVAALQGKKIISIATGSLHCVACSDE 4185
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
G + WG N GQ ++ + P V G ++ +A G H+
Sbjct: 4186 GEVFTWGDNDEGQLGDDTTNAIQRPRLVSALQGKKITNVACGSAHT 4231
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 101/231 (43%), Gaps = 24/231 (10%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I V CG + A+S G L WG YG+LG G T E P +I + E
Sbjct: 569 IIDVECGGTYSAAISANGALYTWGRGNYGRLGHG-TAEDCLTPTMISALSD--------E 619
Query: 229 KITQVSCGEY--HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
I +V+CG + H+ ++ G+VY+WG G G+LG D LPR + L + I
Sbjct: 620 HIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLGR---GGSDGSKLPRLIEKLQNVKIV 676
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
V CG S AL+ G +Y WG + +LG P E + F + ++
Sbjct: 677 QVYCGAQFSVALSEDGHVYTWGKGEGWKLGH----------PTEENVRFPEMVEVLRDRK 726
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE 397
V V+ G SH L G ++GWG N Q + + P ++ G+
Sbjct: 727 VVGVSLGVSHVLALTDQGEVYGWGKNENKQICDSSELFVQQPRLIEALKGQ 777
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 136/328 (41%), Gaps = 48/328 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G + P L G + +D+ CG ++AA++++G
Sbjct: 536 VYSWGNGDGGRLGHGDTSTKEE------PTLIQALKGKD--IIDVECGGTYSAAISANGA 587
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG GT E P + L E + ++CG+ + S
Sbjct: 588 LYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTLC-------ITSQG 640
Query: 143 RLWVWGQ----------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
+++ WG + GS PRL N I QV CG+ VALSE G + WG
Sbjct: 641 KVYSWGDGDYGKLGRGGSDGSKLPRLI--EKLQNVKIVQVYCGAQFSVALSEDGHVYTWG 698
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
E +LG T E ++ P ++ E K+ VS G H A+++ GEVY W
Sbjct: 699 KGEGWKLGHP-TEENVRFPEMV--------EVLRDRKVVGVSLGVSHVLALTDQGEVYGW 749
Query: 253 GLGSVGQLGHCSLQSGDKELL---PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
G Q+ S EL PR + AL G + V CG S A T
Sbjct: 750 GKNENKQICDSS------ELFVQQPRLIEALKGQKVVGVCCGPAQSFAWTDDNERTP-KT 802
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRN 337
+ + LG QT F LI N + N
Sbjct: 803 AVPFVIDLGEQT--FKLIENLLEVVLTN 828
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 112/239 (46%), Gaps = 42/239 (17%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHE--HT 74
I + +Y WG G+ GR G + QL P+L G R + +ACG T
Sbjct: 3048 ITSSGELYTWGL---GEYGRLGHGDNI---TQLKPKLIKSLVG--HRIVQVACGSRDAQT 3099
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
A+ +G +F+WG +FG+LG G EG P +++L + V I CGA + A+ +
Sbjct: 3100 LALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIERLNALEVVQIECGAQFSLALTK--- 3156
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGA----FTPNTI-------ICQVSCGSVHVVALS 183
T +W WG+ ++ RL G+ P I + V+ G++H +A++
Sbjct: 3157 ------TGEVWTWGK---GDYFRLGHGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVT 3207
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
+ G + AWG N++GQ G G T + P ++ G E I +V+CG HS A
Sbjct: 3208 DTGQVYAWGDNDHGQQGNGTTIVN-RKPALVHGL--------EDVHINRVACGSSHSIA 3257
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 128/268 (47%), Gaps = 33/268 (12%)
Query: 122 GAHCTAAIAEPRENDGTISTS---RLWVWGQN--------QGSNFPRLFWGAFTPNTIIC 170
G +A + +++ G S++ R++VWG N +GS F
Sbjct: 2871 GPSTSANVGRSQDSTGEPSSTVGCRVFVWGLNDKDQLGGMKGSKVKLPVQSDFLSQLWPI 2930
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
++ GS + +S G L A G G+LG G + + PR I ++++ ++K+
Sbjct: 2931 HIAGGSKSLFIVSHEGKLYACGEGTNGRLGLGHS-NNVPYPRPIPFLSQYV-----IKKV 2984
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
V G H+ A++ +G+V++WG G G+LGH + + DK P+ + AL I+D+AC
Sbjct: 2985 A-VHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDK---PKMIEALRSKKIRDIAC 3040
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
G HS A+TS G LY WG + G+LG G N + + I LV VQ V
Sbjct: 3041 GSSHSAAITSSGELYTWGLGEYGRLGHG---------DNITQLKPKLIKSLVGHRIVQ-V 3090
Query: 351 ACG--HSHTLVYMRDGRIHGWGYNSYGQ 376
ACG + TL +G + WG +G+
Sbjct: 3091 ACGSRDAQTLALTDEGWVFSWGDGDFGK 3118
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 116/248 (46%), Gaps = 48/248 (19%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACG--HEHT 74
I A A+Y WG + G+ G E L P + A ++ + +ACG + HT
Sbjct: 582 ISANGALYTWGRGNYGRLGHGTAE------DCLTPTMIS--ALSDEHIIKVACGSFYAHT 633
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
+ S G +++WG ++G+LG G +G K P +++LQ+ + + CGA + A++E
Sbjct: 634 LCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNVKIVQVYCGAQFSVALSE--- 690
Query: 135 NDGTISTSRLWVWGQNQG----------SNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
DG + T WG+ +G FP + + + VS G HV+AL++
Sbjct: 691 -DGHVYT-----WGKGEGWKLGHPTEENVRFPEMV--EVLRDRKVVGVSLGVSHVLALTD 742
Query: 185 CGLLQAWGYNEYGQLGRGITCEG----LQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
G + WG NE Q+ C+ +Q PR+I EA + +K+ V CG S
Sbjct: 743 QGEVYGWGKNENKQI-----CDSSELFVQQPRLI--------EALKGQKVVGVCCGPAQS 789
Query: 241 AAVSENGE 248
A +++ E
Sbjct: 790 FAWTDDNE 797
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 100/212 (47%), Gaps = 36/212 (16%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I Q+ C ++ L++ G + Y+ Q + +T GL G +IK A PE +
Sbjct: 473 IKQICCSDRTILILTQTGKVFFMYYSSDTQCPQEMT--GLSGINMIKIAAH-----PEGK 525
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
H A++++ EVY+WG G G+LGH + ++ P + AL G I DV
Sbjct: 526 ----------HYLALTKDYEVYSWGNGDGGRLGHGDTSTKEE---PTLIQALKGKDIIDV 572
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSF--SLIPNESDTYFRNIPILVVPNG 346
CGG +S A+++ GALY WG G+LG G ++I SD +
Sbjct: 573 ECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIK--------- 623
Query: 347 VQLVACG--HSHTLVYMRDGRIHGWGYNSYGQ 376
VACG ++HTL G+++ WG YG+
Sbjct: 624 ---VACGSFYAHTLCITSQGKVYSWGDGDYGK 652
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 88/192 (45%), Gaps = 16/192 (8%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
K V+ G H A+S + +VY+WG G G+LGH + + + P+ + AL G I D+
Sbjct: 3958 KKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLACET---PKLIEALQGYEIIDI 4014
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
ACGG HS A+TS G LY WG + G+LG G + D + +V V
Sbjct: 4015 ACGGAHSAAITSTGQLYTWGKGRYGRLGHG----------DSEDQLKPKLIEELVGYKVI 4064
Query: 349 LVAC--GHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGG 405
VAC G + TL D + WG YG+ S P ++ G V K+ G
Sbjct: 4065 DVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPKKIESLAGLGVIKVECGS 4124
Query: 406 GHSAVLADACSL 417
S L + S+
Sbjct: 4125 QFSVALTRSGSV 4136
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 101/227 (44%), Gaps = 27/227 (11%)
Query: 190 AWGYNEYGQLGRGITCEGLQGPRV-IKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG N+ QLG G++G +V + + FL + + ++ G VS G+
Sbjct: 2898 VWGLNDKDQLG------GMKGSKVKLPVQSDFLSQLWPI----HIAGGSKSLFIVSHEGK 2947
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHSCALTSKGALYA 306
+Y G G+ G+LG L + PR + L IK VA GG H+ ALT G +++
Sbjct: 2948 LYACGEGTNGRLG---LGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFS 3004
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRI 366
WG + G+LG G + +L + R+ ++ +ACG SH+ G +
Sbjct: 3005 WGEGEDGKLGHGNR---LNLDKPKMIEALRS-------KKIRDIACGSSHSAAITSSGEL 3054
Query: 367 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLA 412
+ WG YG+ + + P + VG + ++A G + LA
Sbjct: 3055 YTWGLGEYGRLGHGDNITQLKPKLIKSLVGHRIVQVACGSRDAQTLA 3101
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 80/218 (36%), Gaps = 62/218 (28%)
Query: 246 NGEVYTWGLGSVGQLG--------------------HCSLQSGDKEL------------- 272
+G +Y WG GQLG L G++ L
Sbjct: 3869 SGTIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLVGGEQTLFAVTADGKVYATG 3928
Query: 273 ----------------LPRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWGGSQAGQ 314
+P + ++ +FIK +A GG H AL++ +Y+WG G+
Sbjct: 3929 YGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGK 3988
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LG G + + E+ + I I ACG +H+ G+++ WG Y
Sbjct: 3989 LGHGNRLACETPKLIEALQGYEIIDI----------ACGGAHSAAITSTGQLYTWGKGRY 4038
Query: 375 GQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
G+ + S P ++ VG +V +A G G + L
Sbjct: 4039 GRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTL 4076
>gi|326671858|ref|XP_685964.5| PREDICTED: hypothetical protein LOC557752 [Danio rerio]
Length = 1413
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 122/372 (32%), Positives = 175/372 (47%), Gaps = 60/372 (16%)
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
N L I+CG EHTA V +G LF +G+N +GQLG GT+ P VK L+SE VK +
Sbjct: 35 NDVPLRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALKSERVKLTA 94
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVW---GQNQG----------SNFPRLFWGAFTPNT 167
CG T TSR ++ G N+G ++F + + F
Sbjct: 95 CGRTHTLVF-----------TSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEF--FNKQG 141
Query: 168 IICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL 227
I ++ GS AL++ G L WG N GQ+G G L V G F
Sbjct: 142 PIKMLAAGSNTSAALTQDGRLYMWGDNSEGQIGLGKESNALTPQEVSVGKRVFW------ 195
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
VSCG YHSA V+ +G +YT+G G+LG S + +P++V + ++
Sbjct: 196 -----VSCGYYHSAFVTVDGALYTFGEKDSGKLG-LSTEKLANHKVPQQVTDIPDRVVQ- 248
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSF-SLIPNESDTYFRNIPILVVPNG 346
VACGG H+ ALT + +Y++G Q GQLG G T F S +P + +FR
Sbjct: 249 VACGGGHTVALT-ENEVYSFGLGQFGQLGHG--TFIFESRLPRVVE-HFRK-------GR 297
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQ--AANEKSTYAWYPS--P--VDWCVGEVRK 400
V+ ACG +HT + +G ++ +G +G+ E T + P+ P +D+ V V
Sbjct: 298 VKHAACGENHTALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSV-- 355
Query: 401 LAAGGGHSAVLA 412
GG H VLA
Sbjct: 356 -TCGGCHMLVLA 366
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 124/280 (44%), Gaps = 43/280 (15%)
Query: 144 LWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
++ +G+++ N P FW N + ++SCG H ++E G L +G N +GQLG G
Sbjct: 15 VFTFGKSKFADNAPSKFW---LKNDVPLRISCGDEHTALVTENGKLFMFGSNNWGQLGLG 71
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ--L 260
T + P +K A + E++ +CG H+ + G +Y G + GQ L
Sbjct: 72 -TKTTVNKPTCVK--------ALKSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGL 122
Query: 261 GHCSLQSGDKELLPRRVVALDGIF-----IKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
G C+ R L F IK +A G S ALT G LY WG + GQ+
Sbjct: 123 GDCN---------DRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMWGDNSEGQI 173
Query: 316 GLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
GLG + S +L P E + V V V+CG+ H+ DG ++ +G G
Sbjct: 174 GLGKE--SNALTPQE----------VSVGKRVFWVSCGYYHSAFVTVDGALYTFGEKDSG 221
Query: 376 Q--AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLAD 413
+ + EK P V V ++A GGGH+ L +
Sbjct: 222 KLGLSTEKLANHKVPQQVTDIPDRVVQVACGGGHTVALTE 261
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 90/194 (46%), Gaps = 38/194 (19%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y+WG N GQ G G+E P+++ G W ++CG+ H+A V DG
Sbjct: 162 LYMWGDNSEGQIGL-GKESNALTPQEV-------SVGKRVFW--VSCGYYHSAFVTVDGA 211
Query: 83 LFTWGANEFGQLGDGTEEGRKH--PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
L+T+G + G+LG TE+ H P++V + V+ ++CG T A+ E
Sbjct: 212 LYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDRVVQ-VACGGGHTVALTE--------- 261
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFT-----PNTI-------ICQVSCGSVHVVALSECGLL 188
+ ++ +G Q F +L G F P + + +CG H +++ GLL
Sbjct: 262 -NEVYSFGLGQ---FGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITDNGLL 317
Query: 189 QAWGYNEYGQLGRG 202
+G +G+LG G
Sbjct: 318 YTFGDGRHGKLGLG 331
>gi|269793976|ref|YP_003313431.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Sanguibacter keddieii DSM 10542]
gi|269096161|gb|ACZ20597.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Sanguibacter keddieii DSM 10542]
Length = 737
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 162/368 (44%), Gaps = 40/368 (10%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
+K I+ WG N SGQ G R +P ++ G ANS + +A G H+ A+
Sbjct: 159 SKGQIWAWGLNSSGQLGNGTRASST---TPVPVDMTGV--MANSEMVAVAAGARHSLALD 213
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSE-FVKSISCGAHCTAAIAEPRENDG 137
S+G +F WG N FG+LGDGT R P +V L +E V+ IS G + T A + +
Sbjct: 214 SEGNVFAWGRNGFGELGDGTRVDRSTPVRVGGLLAEQPVERISGGGNTTDAGIQ-GNSLA 272
Query: 138 TISTSRLWVWGQNQGSNF-----------PRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
+ R++ WG + P L G + I S G+ + V LS G
Sbjct: 273 LGANGRVYTWGAGERGRLGIGTSPASIATPALV-GGLIADQHIVDASFGTNNAVVLSSDG 331
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRV-IKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
L +WG YG LG G T V + G + I+QV G+ S A S
Sbjct: 332 RLFSWGDGSYGALGNGTTTTSASPVAVTMTGVLSGV-------SISQVDAGQLGSIARSV 384
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV--ALDGIFIKDV--ACGGVHSCALTSK 301
GE++TWG + GQ+G+ + +P RV AL+ + + + + G AL +
Sbjct: 385 TGELFTWGWNNAGQIGNGTTS---NSTVPTRVDMGALEALGNRPIQASAGPAFYMALGAD 441
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
G L AWG + +GQLG G + + D ++V N +Q+ TL
Sbjct: 442 GRLAAWGLNTSGQLGAGTNVNASRPVAVRVDG------VMVGANIIQVTNSSSGTTLALA 495
Query: 362 RDGRIHGW 369
DGR+ W
Sbjct: 496 DDGRVFAW 503
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 138/340 (40%), Gaps = 44/340 (12%)
Query: 58 AGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVK 117
A + R IA GH H + S G ++ WG N GQLG+GT P V +
Sbjct: 138 AASTGRDTHIAAGHSHGLYLDSKGQIWAWGLNSSGQLGNGTRASSTTPVPVD------MT 191
Query: 118 SISCGAHCTAAIAEPRENDGTISTSRLWVWGQN------QGSNFPR---LFWGAFTPNTI 168
+ + A A R + S ++ WG+N G+ R + G
Sbjct: 192 GVMANSEMVAVAAGARHSLALDSEGNVFAWGRNGFGELGDGTRVDRSTPVRVGGLLAEQP 251
Query: 169 ICQVSCGSV--------HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF 220
+ ++S G + +AL G + WG E G+LG G + + P ++ G
Sbjct: 252 VERISGGGNTTDAGIQGNSLALGANGRVYTWGAGERGRLGIGTSPASIATPALVGGLIAD 311
Query: 221 LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL 280
+ I S G ++ +S +G +++WG GS G LG+ + + + L
Sbjct: 312 -------QHIVDASFGTNNAVVLSSDGRLFSWGDGSYGALGNGTTTTSASPVAVTMTGVL 364
Query: 281 DGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDT----YFR 336
G+ I V G + S A + G L+ WG + AGQ+G G T S S +P D
Sbjct: 365 SGVSISQVDAGQLGSIARSVTGELFTWGWNNAGQIGNG--TTSNSTVPTRVDMGALEALG 422
Query: 337 NIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
N PI + G + + DGR+ WG N+ GQ
Sbjct: 423 NRPI--------QASAGPAFYMALGADGRLAAWGLNTSGQ 454
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 92/236 (38%), Gaps = 36/236 (15%)
Query: 170 CQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK 229
++ G H + L G + AWG N GQLG G P + + +
Sbjct: 145 THIAAGHSHGLYLDSKGQIWAWGLNSSGQLGNGTRASSTT-PVPVDMTGVMAN-----SE 198
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL--------- 280
+ V+ G HS A+ G V+ WG G+LG + D+ P RV L
Sbjct: 199 MVAVAAGARHSLALDSEGNVFAWGRNGFGELGDGTRV--DRS-TPVRVGGLLAEQPVERI 255
Query: 281 -DGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIP 339
G D G +S AL + G +Y WG + G+LG+G S + P
Sbjct: 256 SGGGNTTDAGIQG-NSLALGANGRVYTWGAGERGRLGIGTSPASIA------------TP 302
Query: 340 ILV----VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
LV + + G ++ +V DGR+ WG SYG N +T + P V
Sbjct: 303 ALVGGLIADQHIVDASFGTNNAVVLSSDGRLFSWGDGSYGALGNGTTTTSASPVAV 358
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 5/163 (3%)
Query: 217 YAKF--LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLP 274
+AK+ L A + T ++ G H + G+++ WGL S GQLG+ + S +
Sbjct: 129 HAKYPTLSTAASTGRDTHIAAGHSHGLYLDSKGQIWAWGLNSSGQLGNGTRASSTTPVPV 188
Query: 275 RRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTY 334
+ + VA G HS AL S+G ++AWG + G+LG G TR P
Sbjct: 189 DMTGVMANSEMVAVAAGARHSLALDSEGNVFAWGRNGFGELGDG--TRVDRSTPVRVGGL 246
Query: 335 FRNIPILVVPNGVQLVACG-HSHTLVYMRDGRIHGWGYNSYGQ 376
P+ + G G ++L +GR++ WG G+
Sbjct: 247 LAEQPVERISGGGNTTDAGIQGNSLALGANGRVYTWGAGERGR 289
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 9/120 (7%)
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
+A G H L SKG ++AWG + +GQLG G + S + +P + N ++
Sbjct: 147 IAAGHSHGLYLDSKGQIWAWGLNSSGQLGNGTRASSTTPVPVDMTGVMANSEMVA----- 201
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE--VRKLAAGG 405
VA G H+L +G + WG N +G+ + P V + E V +++ GG
Sbjct: 202 --VAAGARHSLALDSEGNVFAWGRNGFGELGDGTRVDRSTPVRVGGLLAEQPVERISGGG 259
>gi|195060098|ref|XP_001995753.1| GH17927 [Drosophila grimshawi]
gi|193896539|gb|EDV95405.1| GH17927 [Drosophila grimshawi]
Length = 4933
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 149/308 (48%), Gaps = 49/308 (15%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ G +H A+ DG +F+WG E G+LG G P V+ L+++ ++ I+CG+ +
Sbjct: 3004 VHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDIACGSSHS 3063
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQ------GSNFPRLFWGAFTP--NTIICQVSCGS-- 176
AAI+ S L+ WG + G N +L T + + QV+CGS
Sbjct: 3064 AAIS---------SQGELYTWGLGEYGRLGHGDNATQLKPKLVTALCGSRVIQVACGSRD 3114
Query: 177 VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG 236
+AL+E G + +WG ++G+LGRG + EG P I+ + + Q+ CG
Sbjct: 3115 AQTLALTEDGAVFSWGDGDFGKLGRGGS-EGSATPHEIERLSGI--------GVVQIECG 3165
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL-PRRVVALDGIFIKDVACGGVHS 295
S A++ GEV+TWG G +LGH GD+ + P+ + L G + VA G +H
Sbjct: 3166 AQFSLALTRAGEVWTWGKGDYYRLGH----GGDQHVRKPQPIAGLRGRRVIHVAVGALHC 3221
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV---PNGVQLVAC 352
A+T G +YAWG + GQ G G +T+ P LV+ V VAC
Sbjct: 3222 LAVTDAGQVYAWGDNDHGQQGSG-------------NTFVNKKPALVIGLDAVFVNRVAC 3268
Query: 353 GHSHTLVY 360
G SH++ +
Sbjct: 3269 GSSHSMAW 3276
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 135/286 (47%), Gaps = 35/286 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R PK L L G DIACG H+AA+ + G
Sbjct: 4178 VYAWGEGEDGKLGHGNRLSYDR-PKLLE-HLNGMSVA------DIACGSAHSAAITASGH 4229
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ TWG +G+LG G E + P+ V+ L I+CG+ + +++
Sbjct: 4230 VLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDN------ 4283
Query: 143 RLWVWGQNQ-------GSNFPRLFWGAFTPNTI-ICQVSCGSVHVVALSECGLLQAWGYN 194
+W WG GS+ +L + + + + +V CGS VAL++ G + WG
Sbjct: 4284 -VWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKG 4342
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
++ +LG G + + ++ P+ + A + +KI ++ G H A S+ GEVYTWG
Sbjct: 4343 DFHRLGHG-SVDHVRRPKKVA--------ALQGKKIISIATGSLHCVACSDAGEVYTWGD 4393
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
GQLG ++ + + PR V AL G I V CG H+ AL++
Sbjct: 4394 NDEGQLGDGTVTAIQR---PRLVAALQGKHIVKVTCGSAHTLALST 4436
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 140/320 (43%), Gaps = 45/320 (14%)
Query: 51 PELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQ 110
P L G + + + G +H A+ +DG ++ WG E G+LG G P+ ++
Sbjct: 4146 PTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRLSYDRPKLLEH 4205
Query: 111 LQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFW 160
L V I+CG+ +AAI ++ + WG+ + P+L
Sbjct: 4206 LNGMSVADIACGSAHSAAIT---------ASGHVLTWGKGRYGRLGHGDSEDQLRPKLVE 4256
Query: 161 GAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF 220
I G + +++ + +WG +YG+LGRG + +G + P I+ A
Sbjct: 4257 ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS-DGCKLPYKIESLAGL 4315
Query: 221 LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL 280
+ +V CG S A++++G VYTWG G +LGH S+ D P++V AL
Sbjct: 4316 --------GVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSV---DHVRRPKKVAAL 4364
Query: 281 DGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI 340
G I +A G +H A + G +Y WG + GQLG G + T + +
Sbjct: 4365 QGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDG------------TVTAIQRPRL 4412
Query: 341 LVVPNGVQL--VACGHSHTL 358
+ G + V CG +HTL
Sbjct: 4413 VAALQGKHIVKVTCGSAHTL 4432
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 174/410 (42%), Gaps = 62/410 (15%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S IY WG+NH GQ G G E RI P C A + R + +A G + AV D
Sbjct: 4070 STIYGWGHNHRGQLG--GLEGS-RIKTPTP-----CEALSLLRPVQLAGGEQSLFAVTPD 4121
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDG 137
G LF G G+LG G + P + LQ FVK ++ G HC A DG
Sbjct: 4122 GKLFATGYGSGGRLGVGGSDSWSIPTLLGSLQHVFVKKVAVNSGGKHCLALT-----TDG 4176
Query: 138 TISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
+ + WG+ + P+L + ++CGS H A++ G
Sbjct: 4177 EV-----YAWGEGEDGKLGHGNRLSYDRPKLL--EHLNGMSVADIACGSAHSAAITASGH 4229
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSE 245
+ WG YG+LG G + + L+ P++++ + + ++C G+ + +++
Sbjct: 4230 VLTWGKGRYGRLGHGDSEDQLR-PKLVEALLGY--------RAIDIACGSGDAQTLCITD 4280
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+ V++WG G G+LG D LP ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4281 DDNVWSWGDGDYGKLGR---GGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVY 4337
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRD 363
WG +LG G S + R + G ++ +A G H +
Sbjct: 4338 TWGKGDFHRLGHG------------SVDHVRRPKKVAALQGKKIISIATGSLHCVACSDA 4385
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
G ++ WG N GQ + T P V G+ + K+ G H+ L+
Sbjct: 4386 GEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4435
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 132/286 (46%), Gaps = 41/286 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G+ G + + K P L R DIACG H+AA++S G
Sbjct: 3020 VFSWG---EGEDGKLGHGNRTTLDK---PRLVEALRAKKIR--DIACGSSHSAAISSQGE 3071
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ V L V ++CG+ +A DG +
Sbjct: 3072 LYTWGLGEYGRLGHGDNATQLKPKLVTALCGSRVIQVACGSRDAQTLA--LTEDGAV--- 3126
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+ WG +F +L G+ TP+ I + Q+ CG+ +AL+ G + W
Sbjct: 3127 --FSWGDG---DFGKLGRGGSEGSATPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTW 3181
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G + ++ P+ I G ++ V+ G H AV++ G+VY
Sbjct: 3182 GKGDYYRLGHGGD-QHVRKPQPIAGLRG--------RRVIHVAVGALHCLAVTDAGQVYA 3232
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
WG GQ G + K P V+ LD +F+ VACG HS A
Sbjct: 3233 WGDNDHGQQGSGNTFVNKK---PALVIGLDAVFVNRVACGSSHSMA 3275
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 166/408 (40%), Gaps = 70/408 (17%)
Query: 23 IYVWGYNHSGQTG-RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+ VWG N Q G KG + ++ Q L R + IA G + V+ DG
Sbjct: 2914 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRL---------RPIHIAGGSKSLFVVSQDG 2964
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
+F G G+LG G P ++ L VK ++ G H A DG
Sbjct: 2965 KVFACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTL-----DG- 3018
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+++ WG+ + PRL I ++CGS H A+S G L
Sbjct: 3019 ----KVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKK--IRDIACGSSHSAAISSQGEL 3072
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAVSEN 246
WG EYG+LG G L+ P+++ ++ QV+CG + + A++E+
Sbjct: 3073 YTWGLGEYGRLGHGDNATQLK-PKLVTALCG--------SRVIQVACGSRDAQTLALTED 3123
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
G V++WG G G+LG + P + L GI + + CG S ALT G ++
Sbjct: 3124 GAVFSWGDGDFGKLGR---GGSEGSATPHEIERLSGIGVVQIECGAQFSLALTRAGEVWT 3180
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDG 364
WG +LG G D + R + G ++ VA G H L G
Sbjct: 3181 WGKGDYYRLGHG------------GDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAG 3228
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE----VRKLAAGGGHS 408
+++ WG N +GQ + + P+ V +G V ++A G HS
Sbjct: 3229 QVYAWGDNDHGQQGSGNTFVNKKPALV---IGLDAVFVNRVACGSSHS 3273
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 109/239 (45%), Gaps = 42/239 (17%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHE--HT 74
I ++ +Y WG G+ G QL+ P+L G SR + +ACG T
Sbjct: 3066 ISSQGELYTWGLGEYGRLGHGDNATQLK------PKLVTALCG--SRVIQVACGSRDAQT 3117
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
A+ DG +F+WG +FG+LG G EG P ++++L V I CGA + A+ E
Sbjct: 3118 LALTEDGAVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIGVVQIECGAQFSLALTRAGE 3177
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALS 183
+W WG+ ++ RL G P I + V+ G++H +A++
Sbjct: 3178 ---------VWTWGKG---DYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVT 3225
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
+ G + AWG N++GQ G G T + VI A F + +V+CG HS A
Sbjct: 3226 DAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVF---------VNRVACGSSHSMA 3275
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 113/241 (46%), Gaps = 42/241 (17%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACG--HEHT 74
I A + WG G+ G E QLR PK L L G R +DIACG T
Sbjct: 4224 ITASGHVLTWGKGRYGRLGHGDSEDQLR-PK-LVEALLG------YRAIDIACGSGDAQT 4275
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
+ D +++WG ++G+LG G +G K P K++ L V + CG+ + A+ +
Sbjct: 4276 LCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTK--- 4332
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGAF----TPNTI-------ICQVSCGSVHVVALS 183
+ ++ WG+ +F RL G+ P + I ++ GS+H VA S
Sbjct: 4333 ------SGAVYTWGKG---DFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACS 4383
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ G + WG N+ GQLG G T +Q PR++ A + + I +V+CG H+ A+
Sbjct: 4384 DAGEVYTWGDNDEGQLGDG-TVTAIQRPRLVA--------ALQGKHIVKVTCGSAHTLAL 4434
Query: 244 S 244
S
Sbjct: 4435 S 4435
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 115/258 (44%), Gaps = 34/258 (13%)
Query: 69 CGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
C H AV ++ ++WG + +LG G R+ P K++ L VKS+ CG +AA
Sbjct: 648 CEGRHFLAVDNNFNAYSWGTGDNRRLGHGDCHSRELPTKIESLVRR-VKSVYCGCSYSAA 706
Query: 129 IAEPRENDGTISTSRLWVWGQ----------NQGSNFPRLFWGAFTPNTIICQVSCGSVH 178
I R N L+ WG+ + P + + + G H
Sbjct: 707 ITL-RGN--------LYTWGRGNYGRLGHGISDDQCLPTMVMALKDHQVVDVALGSGDAH 757
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
+ L+ GL+ AWG +YG+LG +C P +I+ L ++ +V G
Sbjct: 758 TLCLTNEGLVYAWGDGDYGKLGNA-SCNSSLQPLLIEC----------LPRVQRVFAGSQ 806
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKEL-LPRRVVALDGIFIKDVACGGVHSCA 297
S A++ G++Y+WG S LGH ++ + +PR + +L I DVA G H A
Sbjct: 807 FSLALTGEGQLYSWGKASC--LGHQLVERNVQGCSVPRLITSLQHKRIVDVAVGVTHCLA 864
Query: 298 LTSKGALYAWGGSQAGQL 315
L+S G ++ WG + Q+
Sbjct: 865 LSSAGEIFGWGRNDNQQI 882
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 109/236 (46%), Gaps = 31/236 (13%)
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTIICQVS-CGSVHVVALSECGLLQAWGYNEYGQLG 200
+L+ W ++ P+ L +G T I S C H +A+ +WG + +LG
Sbjct: 615 KLYNWHISKPDTEPQPLDFGDIGSETFISIASHCEGRHFLAVDNNFNAYSWGTGDNRRLG 674
Query: 201 RGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQL 260
G C + P I+ + ++ V CG +SAA++ G +YTWG G+ G+L
Sbjct: 675 HG-DCHSRELPTKIESLVR---------RVKSVYCGCSYSAAITLRGNLYTWGRGNYGRL 724
Query: 261 GHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLG 318
GH D + LP V+AL + DVA G H+ LT++G +YAWG G+LG
Sbjct: 725 GH---GISDDQCLPTMVMALKDHQVVDVALGSGDAHTLCLTNEGLVYAWGDGDYGKLG-- 779
Query: 319 PQTRSFSLIPNES-DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNS 373
N S ++ + + I +P VQ V G +L +G+++ WG S
Sbjct: 780 ----------NASCNSSLQPLLIECLPR-VQRVFAGSQFSLALTGEGQLYSWGKAS 824
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 110/276 (39%), Gaps = 43/276 (15%)
Query: 149 QNQGSNF-PRLFWGAFT-----PNTIIC-----QVSCGSVHVVALSECGLLQAWGYNEYG 197
+ QG N P L W + + P + C QV+C V+ LS+ G L W ++
Sbjct: 566 EQQGFNVEPALSWTSASTQRPPPALLNCKFHVKQVACSKDIVLLLSKEGKLYNWHISK-- 623
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
P F D E C H AV N Y+WG G
Sbjct: 624 -------------PDTEPQPLDFGDIGSETFISIASHCEGRHFLAVDNNFNAYSWGTGDN 670
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
+LGH S + LP ++ +L +K V CG +S A+T +G LY WG G+LG
Sbjct: 671 RRLGHGDCHSRE---LPTKIESLVR-RVKSVYCGCSYSAAITLRGNLYTWGRGNYGRLGH 726
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRDGRIHGWGYNSYG 375
G D + + + + V VA G +HTL +G ++ WG YG
Sbjct: 727 G----------ISDDQCLPTMVMALKDHQVVDVALGSGDAHTLCLTNEGLVYAWGDGDYG 776
Query: 376 QAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
+ N + P ++ C+ V+++ AG S L
Sbjct: 777 KLGNASCNSSLQPLLIE-CLPRVQRVFAGSQFSLAL 811
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 10/111 (9%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGAN-SRWLDIACGHEHTAAVASDG 81
++ WG + G G ++ +R P+ + AG R + +A G H AV G
Sbjct: 3178 VWTWGKGDYYRLGHGG-DQHVRKPQPI--------AGLRGRRVIHVAVGALHCLAVTDAG 3228
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
++ WG N+ GQ G G K P V L + FV ++CG+ + A P
Sbjct: 3229 QVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSMAWGLP 3279
>gi|74200231|dbj|BAE22920.1| unnamed protein product [Mus musculus]
Length = 681
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 112/361 (31%), Positives = 172/361 (47%), Gaps = 50/361 (13%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++CG EHTA V + L+ +G+N +GQLG G++ P +K L+ E VK +CG + T
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 137
Query: 127 -------AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHV 179
A N+G +L + + F ++ + FTP I Q+S G+
Sbjct: 138 LVSTDTGGVYAAGGNNEG-----QLGLGDTDDRDTFHQIVF--FTPADTIKQLSAGANTS 190
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
AL+E G L WG N GQ+G V G + I+ +SCG YH
Sbjct: 191 AALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVG-----------KPISWISCGYYH 239
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL-----PRRVVALDGIFIKDVACGGVH 294
SA V+ +GE+YT+G G+LG + ELL P+RV+ + I+ VACGG H
Sbjct: 240 SAFVTMDGELYTFGEPENGKLGLPN------ELLMNHRSPQRVLGIPERVIQ-VACGGGH 292
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGH 354
+ LT K +YA+G Q GQLGLG +F +E R + + ++CG
Sbjct: 293 TVVLTEK-VVYAFGLGQFGQLGLG----TFLFETSEPKIIER-----IKDQKICHISCGE 342
Query: 355 SHTLVYMRDGRIHGWGYNSYGQ--AANEKSTYAWYPSPV-DWCVGEVRKLAAGGGHSAVL 411
+HT + G ++ +G +G+ E T ++P+ ++ V+ +A GG H V
Sbjct: 343 NHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF 402
Query: 412 A 412
A
Sbjct: 403 A 403
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 125/276 (45%), Gaps = 29/276 (10%)
Query: 141 TSRLWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
T ++ +G+ + N P FW F + IC +SCG H ++ L +G N +GQL
Sbjct: 49 TGAVFTFGKTKFAENIPSKFW--FKNDIPIC-LSCGDEHTAIVTGNNKLYMFGSNNWGQL 105
Query: 200 GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ 259
G G ++ P IK A + EK+ +CG H+ ++ G VY G + GQ
Sbjct: 106 GLGSKAAIIK-PTCIK--------ALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQ 156
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LG + D++ + V IK ++ G S ALT G L+ WG + GQ+GL
Sbjct: 157 LGLG--DTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGL-- 212
Query: 320 QTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ--A 377
+ +S IP+E + V + ++CG+ H+ DG ++ +G G+
Sbjct: 213 EDKSNVCIPHE----------VTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGL 262
Query: 378 ANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLAD 413
NE P V V ++A GGGH+ VL +
Sbjct: 263 PNELLMNHRSPQRVLGIPERVIQVACGGGHTVVLTE 298
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 89/195 (45%), Gaps = 38/195 (19%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+++WG N GQ G + + + IP ++ G W I+CG+ H+A V DG
Sbjct: 199 LFMWGDNSEGQIGLEDK-SNVCIPHEV-------TVGKPISW--ISCGYYHSAFVTMDGE 248
Query: 83 LFTWGANEFGQLGDGTEEGRKH--PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
L+T+G E G+LG E H P++V + E V ++CG T + E
Sbjct: 249 LYTFGEPENGKLGLPNELLMNHRSPQRVLGI-PERVIQVACGGGHTVVLTE--------- 298
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFT-----PNTI-------ICQVSCGSVHVVALSECGLL 188
++ +G Q F +L G F P I IC +SCG H ++E GLL
Sbjct: 299 -KVVYAFGLGQ---FGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLL 354
Query: 189 QAWGYNEYGQLGRGI 203
+G +G+LG G+
Sbjct: 355 YTFGDGRHGKLGLGM 369
>gi|391347040|ref|XP_003747773.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Metaseiulus occidentalis]
Length = 523
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 176/360 (48%), Gaps = 37/360 (10%)
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
N + +ACG +H+ + + G F++G+N++GQLG G + +P VK L+ + ++
Sbjct: 41 NDAVISVACGDQHSVFITASGRTFSFGSNDYGQLGHGHTKALVNPRCVKALKDKRAILVA 100
Query: 121 CGAHCTAAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVH 178
CG T + ++ G S +L V P+L A + ++ G+ H
Sbjct: 101 CGRSHTLVATDDKKVYAFGINSEHQLGVKSSAAYHADPQLV--ATLNGVQVKALTAGADH 158
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
+ALS G++ WG +E+GQLG G K K + K +S G Y
Sbjct: 159 SLALSAKGIVYLWGSSEHGQLGLG-----------RKKQRKLPVQLKTEGKAIAISAGAY 207
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
HSA V+ +G +YT+G G+LG + + K P +V + G+ + VACGG H+ AL
Sbjct: 208 HSAYVNTDGVLYTFGETEHGKLG--TNLAPKKCRKPSKVPDIQGL-VTSVACGGSHTVAL 264
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSH 356
T G Y++G GQLGLG + T+ ++ +P GV++ V+ G SH
Sbjct: 265 TCDGRAYSFGDGSQGQLGLGQRV-----------THAGRPHLIQMPTGVKMARVSAGQSH 313
Query: 357 TLVYMRDGR-IHGWGYNSYGQAA---NEKSTYAWYPSPVD-WCVGEVRKLAAGGGHSAVL 411
T ++ +GR ++ G +G+ A E + + P VD + +V++++ GG H+ VL
Sbjct: 314 T-AFLSEGRQMYTCGEGRHGKLALEDGEMGSNKFSPMLVDILSLFQVQQVSCGGCHTLVL 372
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 133/271 (49%), Gaps = 30/271 (11%)
Query: 144 LWVWGQNQGS-NFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
++ +G+++ S N P FW N + V+CG H V ++ G ++G N+YGQLG G
Sbjct: 21 VFTFGKSKFSDNLPGTFW---VKNDAVISVACGDQHSVFITASGRTFSFGSNDYGQLGHG 77
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T + L PR +K A + ++ V+CG H+ +++ +VY +G+ S QLG
Sbjct: 78 HT-KALVNPRCVK--------ALKDKRAILVACGRSHTLVATDDKKVYAFGINSEHQLGV 128
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
S S P+ V L+G+ +K + G HS AL++KG +Y WG S+ GQLGLG + +
Sbjct: 129 KS--SAAYHADPQLVATLNGVQVKALTAGADHSLALSAKGIVYLWGSSEHGQLGLGRKKQ 186
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQL-VACGHSHTLVYMRDGRIHGWGYNSYGQ-AANE 380
R +P+ + G + ++ G H+ DG ++ +G +G+ N
Sbjct: 187 -------------RKLPVQLKTEGKAIAISAGAYHSAYVNTDGVLYTFGETEHGKLGTNL 233
Query: 381 KSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
PS V G V +A GG H+ L
Sbjct: 234 APKKCRKPSKVPDIQGLVTSVACGGSHTVAL 264
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 144/330 (43%), Gaps = 44/330 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y +G N Q G K P QL L G A + G +H+ A+++ G
Sbjct: 115 VYAFGINSEHQLGVKSSAAYHADP-QLVATLNGVQVKA------LTAGADHSLALSAKGI 167
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG++E GQLG G ++ RK P ++K +IS GA+ +A + DG
Sbjct: 168 VYLWGSSEHGQLGLGRKKQRKLPVQLKTEGKAI--AISAGAYHSAYV----NTDGV---- 217
Query: 143 RLWVWGQNQ----GSNF--PRLFWGAFTPNT--IICQVSCGSVHVVALSECGLLQAWGYN 194
L+ +G+ + G+N + + P+ ++ V+CG H VAL+ G ++G
Sbjct: 218 -LYTFGETEHGKLGTNLAPKKCRKPSKVPDIQGLVTSVACGGSHTVALTCDGRAYSFGDG 276
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
GQLG G RV L + P K+ +VS G+ H+A +SE ++YT G
Sbjct: 277 SQGQLGLG--------QRVTHAGRPHLIQMPTGVKMARVSAGQSHTAFLSEGRQMYTCGE 328
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS---- 310
G G+L + G + P V L ++ V+CGG H+ L G G
Sbjct: 329 GRHGKLALEDGEMGSNKFSPMLVDILSLFQVQQVSCGGCHTLVLVVPGLTDPQGNRMGDS 388
Query: 311 ------QAGQLGLGPQTRSFSLIPNESDTY 334
QA +L L R + + +D Y
Sbjct: 389 PISAAVQATELTLARLRRRYKRALSYADLY 418
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 104/227 (45%), Gaps = 22/227 (9%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ AK +Y+WG + GQ G GR++Q ++P QL E + + I+ G H+A
Sbjct: 162 LSAKGIVYLWGSSEHGQLGL-GRKKQRKLPVQLKTE---------GKAIAISAGAYHSAY 211
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRE 134
V +DG L+T+G E G+LG + + P KV +Q V S++C G+H A + R
Sbjct: 212 VNTDGVLYTFGETEHGKLGTNLAPKKCRKPSKVPDIQG-LVTSVACGGSHTVALTCDGRA 270
Query: 135 ND-GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
G S +L + + + P L + +VS G H LSE + G
Sbjct: 271 YSFGDGSQGQLGLGQRVTHAGRPHLIQ--MPTGVKMARVSAGQSHTAFLSEGRQMYTCGE 328
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
+G+L +G G ++ L + L ++ QVSCG H+
Sbjct: 329 GRHGKLA---LEDGEMGS---NKFSPMLVDILSLFQVQQVSCGGCHT 369
>gi|328870950|gb|EGG19322.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 2003
Score = 124 bits (312), Expect = 9e-26, Method: Composition-based stats.
Identities = 104/394 (26%), Positives = 159/394 (40%), Gaps = 88/394 (22%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKH--PEKVKQLQSEFVKSISCGAH 124
++CG EH A + DG LFTWG N GQLG G G+ P +V+ L+ + +S G
Sbjct: 1199 VSCGWEHAAVITVDGELFTWGNNTSGQLGHGLAAGKHQSTPMRVESLKQTPIMMMSLGGE 1258
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-----------ICQVS 173
T I + ++ WG + + +L G TP+ + I ++
Sbjct: 1259 HTVVIDR---------SFHIYSWGNGK---YGQLGHGVSTPHNLPKRIEEFAGQKISSIA 1306
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
G H + L G L A+G NE+GQLG L P + + A + ++T +
Sbjct: 1307 TGYWHTLVLRSGGDLFAFGSNEHGQLGLNDLKHHLPIPTRVN--TADIHHAGQPTRVTGI 1364
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQS-------------------------- 267
CG HS + +G+VY++G + GQLGH S +S
Sbjct: 1365 FCGHSHSVLRTSHGDVYSFGANAKGQLGHGSTESCRYPKLIQGLKGKNIKRITCGPYHTV 1424
Query: 268 -----------------------GDKELLPRRVVALDGIFIKDVACGGVHSCALT----- 299
EL+P+ V ++ V CG H+ LT
Sbjct: 1425 VTTDLDSVYCWGQGEHMCLGTGSNKNELVPKLVELFVNKRVERVVCGLYHTATLTQPMGD 1484
Query: 300 --SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT 357
+ G +Y G S+ G+LG+G RS P+ Y IP + N V L A G
Sbjct: 1485 SNTGGNVYICGSSEHGKLGIGGDPRS----PSLDKAYPAIIPSINSANVVDL-ASGAEFN 1539
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
+ +G ++ WG ++GQ N K+ W P+ V
Sbjct: 1540 ALITSNGALYMWGAGTHGQIGNGKNQDTWIPTRV 1573
Score = 106 bits (264), Expect = 3e-20, Method: Composition-based stats.
Identities = 74/244 (30%), Positives = 114/244 (46%), Gaps = 16/244 (6%)
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQG-PRVIKGYAKFLDEAPELEKI 230
VSCG H ++ G L WG N GQLG G+ Q P ++ L + P I
Sbjct: 1199 VSCGWEHAAVITVDGELFTWGNNTSGQLGHGLAAGKHQSTPMRVES----LKQTP----I 1250
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
+S G H+ + + +Y+WG G GQLGH + LP+R+ G I +A
Sbjct: 1251 MMMSLGGEHTVVIDRSFHIYSWGNGKYGQLGHGVSTPHN---LPKRIEEFAGQKISSIAT 1307
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
G H+ L S G L+A+G ++ GQLGL IP +T +I P V +
Sbjct: 1308 GYWHTLVLRSGGDLFAFGSNEHGQLGLNDLKHHLP-IPTRVNT--ADIHHAGQPTRVTGI 1364
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
CGHSH+++ G ++ +G N+ GQ + + YP + G+ ++++ G H+
Sbjct: 1365 FCGHSHSVLRTSHGDVYSFGANAKGQLGHGSTESCRYPKLIQGLKGKNIKRITCGPYHTV 1424
Query: 410 VLAD 413
V D
Sbjct: 1425 VTTD 1428
Score = 95.9 bits (237), Expect = 4e-17, Method: Composition-based stats.
Identities = 75/272 (27%), Positives = 123/272 (45%), Gaps = 36/272 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ +G N GQ G + L IP ++ AG +R I CGH H+ S G
Sbjct: 1321 LFAFGSNEHGQLGLNDLKHHLPIPTRVNTADIH-HAGQPTRVTGIFCGHSHSVLRTSHGD 1379
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++++GAN GQLG G+ E ++P+ ++ L+ + +K I+CG + T T
Sbjct: 1380 VYSFGANAKGQLGHGSTESCRYPKLIQGLKGKNIKRITCGPYHTVV---------TTDLD 1430
Query: 143 RLWVWGQNQ------GSN----FPRLFWGAFTPNTIICQVSCGSVHVVALSE-------C 185
++ WGQ + GSN P+L N + +V CG H L++
Sbjct: 1431 SVYCWGQGEHMCLGTGSNKNELVPKLV--ELFVNKRVERVVCGLYHTATLTQPMGDSNTG 1488
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + G +E+G+LG G + P + K Y + + S E+ +A ++
Sbjct: 1489 GNVYICGSSEHGKLGIG---GDPRSPSLDKAYPAIIPSINSANVVDLASGAEF-NALITS 1544
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV 277
NG +Y WG G+ GQ+G+ Q +P RV
Sbjct: 1545 NGALYMWGAGTHGQIGNGKNQD---TWIPTRV 1573
Score = 93.2 bits (230), Expect = 3e-16, Method: Composition-based stats.
Identities = 90/323 (27%), Positives = 140/323 (43%), Gaps = 56/323 (17%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
IY WG GQ G G +PK++ E F A + IA G+ HT + S G
Sbjct: 1269 IYSWGNGKYGQLGH-GVSTPHNLPKRI--EEF-----AGQKISSIATGYWHTLVLRSGGD 1320
Query: 83 LFTWGANEFGQLGDGTEEGRKH---PEKVKQL------QSEFVKSISCGAHCTAAIAEPR 133
LF +G+NE GQLG + + H P +V Q V I CG H + + R
Sbjct: 1321 LFAFGSNEHGQLG--LNDLKHHLPIPTRVNTADIHHAGQPTRVTGIFCG-HSHSVL---R 1374
Query: 134 ENDGTISTSRLWVWGQ-----NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ G + + GQ + +P+L G N I +++CG H V ++ +
Sbjct: 1375 TSHGDVYSFGANAKGQLGHGSTESCRYPKLIQGLKGKN--IKRITCGPYHTVVTTDLDSV 1432
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE--- 245
WG E+ LG G L P++++ + +++ +V CG YH+A +++
Sbjct: 1433 YCWGQGEHMCLGTGSNKNELV-PKLVELFVN--------KRVERVVCGLYHTATLTQPMG 1483
Query: 246 ----NGEVYTWGLGSVGQLG------HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
G VY G G+LG SL ++P +++ + D+A G +
Sbjct: 1484 DSNTGGNVYICGSSEHGKLGIGGDPRSPSLDKAYPAIIP----SINSANVVDLASGAEFN 1539
Query: 296 CALTSKGALYAWGGSQAGQLGLG 318
+TS GALY WG GQ+G G
Sbjct: 1540 ALITSNGALYMWGAGTHGQIGNG 1562
Score = 85.1 bits (209), Expect = 8e-14, Method: Composition-based stats.
Identities = 89/330 (26%), Positives = 134/330 (40%), Gaps = 57/330 (17%)
Query: 104 HPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPR-LFWGA 162
HP + + KS+SCG A I DG L+ WG N L G
Sbjct: 1184 HPMPALRFNEKHAKSVSCGWEHAAVITV----DG-----ELFTWGNNTSGQLGHGLAAGK 1234
Query: 163 F--TP-------NTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV 213
TP T I +S G H V + + +WG +YGQLG G++ P+
Sbjct: 1235 HQSTPMRVESLKQTPIMMMSLGGEHTVVIDRSFHIYSWGNGKYGQLGHGVSTPH-NLPKR 1293
Query: 214 IKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL 273
I+ +A +KI+ ++ G +H+ + G+++ +G GQLG L+ +
Sbjct: 1294 IEEFAG--------QKISSIATGYWHTLVLRSGGDLFAFGSNEHGQLGLNDLKH--HLPI 1343
Query: 274 PRRVVALD-----------GIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
P RV D GIF CG HS TS G +Y++G + GQLG G
Sbjct: 1344 PTRVNTADIHHAGQPTRVTGIF-----CGHSHSVLRTSHGDVYSFGANAKGQLGHG---- 1394
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKS 382
ES Y + I L N ++ + CG HT+V ++ WG + +
Sbjct: 1395 -----STESCRYPKLIQGLKGKN-IKRITCGPYHTVVTTDLDSVYCWGQGEHMCLGTGSN 1448
Query: 383 TYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 411
P V+ V + V ++ G H+A L
Sbjct: 1449 KNELVPKLVELFVNKRVERVVCGLYHTATL 1478
Score = 51.2 bits (121), Expect = 0.001, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Query: 12 RPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGH 71
+P+ + +Y+ G + G+ G G R + K P + P+ ++ +D+A G
Sbjct: 1480 QPMGDSNTGGNVYICGSSEHGKLGIGGDPRSPSLDKAYPAII---PSINSANVVDLASGA 1536
Query: 72 EHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSE 114
E A + S+G L+ WGA GQ+G+G + P +V L SE
Sbjct: 1537 EFNALITSNGALYMWGAGTHGQIGNGKNQDTWIPTRV-SLSSE 1578
>gi|108756969|ref|YP_633591.1| RCC1 repeat-containing protein [Myxococcus xanthus DK 1622]
gi|108460849|gb|ABF86034.1| RCC1 repeat domain protein [Myxococcus xanthus DK 1622]
Length = 669
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 113/351 (32%), Positives = 159/351 (45%), Gaps = 47/351 (13%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHC 125
++ G H+ A+ +GTL++WG N FGQLGD T R P +V L +++ G AH
Sbjct: 326 VSGGVSHSLAIRGNGTLWSWGHNSFGQLGDETNATRHAPVQVPGLTD--ATAVAGGHAHS 383
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVV 180
A+ A DGT+ W WG N G+ + P + V+ GS +
Sbjct: 384 LASRA-----DGTV-----WAWGLNGGALGDGTTSTQYAPVQVSGLTGAISVAAGSSFSL 433
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
AL G + AWG N G+LG G T + L RV L IT ++ G HS
Sbjct: 434 ALDADGTVWAWGMNGSGELGDGTTTDRLTPVRVSG-----------LSNITALAAGTGHS 482
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
A+ +G V+ WGL G+LG + S LP +V L G+ VA G HS AL +
Sbjct: 483 LALGADGTVWAWGLNFHGELGDGTTVS---RPLPVQVPGLTGVIA--VAAGMYHSVALRN 537
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
G ++AWG + G+LG G T+ S + +P + G VA G H+L
Sbjct: 538 DGTVWAWGWNLKGELGDGTTTQRESPV---------QVPGVT---GAIAVAAGGYHSLAL 585
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
+ D + WG N Q + +T V G V + AGGGHS +L
Sbjct: 586 LSDNTLRAWGKNEDRQLGDGTNTDRHTAVQVSGLTG-VTSVFAGGGHSLIL 635
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 155/360 (43%), Gaps = 56/360 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N GQ G + + P Q+P + +A GH H+ A +DGT
Sbjct: 342 LWSWGHNSFGQLGDETNATR-HAPVQVP---------GLTDATAVAGGHAHSLASRADGT 391
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG N G LGDGT + P +V L S++ G+ + A+ + DGT+
Sbjct: 392 VWAWGLNG-GALGDGTTSTQYAPVQVSGLTGAI--SVAAGSSFSLAL----DADGTV--- 441
Query: 143 RLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
W WG N G+ RL + + I ++ G+ H +AL G + AWG N +
Sbjct: 442 --WAWGMNGSGELGDGTTTDRLTPVRVSGLSNITALAAGTGHSLALGADGTVWAWGLNFH 499
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
G+LG G T + P L + V+ G YHS A+ +G V+ WG
Sbjct: 500 GELGDGTTVS-----------RPLPVQVPGLTGVIAVAAGMYHSVALRNDGTVWAWGWNL 548
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
G+LG + + P +V + G VA GG HS AL S L AWG ++ QLG
Sbjct: 549 KGELGDGTTT---QRESPVQVPGVTGAIA--VAAGGYHSLALLSDNTLRAWGKNEDRQLG 603
Query: 317 LGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
G T + + T GV V G H+L+ D + +G + GQ
Sbjct: 604 DGTNTDRHTAVQVSGLT------------GVTSVFAGGGHSLILRNDQAVWAFGSDVSGQ 651
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 117/260 (45%), Gaps = 33/260 (12%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
+ +A G + A+ +DGT++ WG N G+LGDGT R P +V L + + +++ G
Sbjct: 423 ISVAAGSSFSLALDADGTVWAWGMNGSGELGDGTTTDRLTPVRVSGLSN--ITALAAGTG 480
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVH 178
+ A+ DGT+ W WG N G+ R T + V+ G H
Sbjct: 481 HSLALGA----DGTV-----WAWGLNFHGELGDGTTVSRPLPVQVPGLTGVIAVAAGMYH 531
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
VAL G + AWG+N G+LG G T + + P + G + V+ G Y
Sbjct: 532 SVALRNDGTVWAWGWNLKGELGDGTTTQ-RESPVQVPGVTGAI----------AVAAGGY 580
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
HS A+ + + WG QLG + + +V L G + V GG HS L
Sbjct: 581 HSLALLSDNTLRAWGKNEDRQLGDGTNTDRHTAV---QVSGLTG--VTSVFAGGGHSLIL 635
Query: 299 TSKGALYAWGGSQAGQLGLG 318
+ A++A+G +GQLG G
Sbjct: 636 RNDQAVWAFGSDVSGQLGDG 655
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 115/282 (40%), Gaps = 38/282 (13%)
Query: 144 LWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
LW WG N +N R T V+ G H +A G + AWG N G
Sbjct: 342 LWSWGHNSFGQLGDETNATRHAPVQVPGLTDATAVAGGHAHSLASRADGTVWAWGLNG-G 400
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
LG G T P + G L V+ G S A+ +G V+ WG+
Sbjct: 401 ALGDGTTST-QYAPVQVSG----------LTGAISVAAGSSFSLALDADGTVWAWGMNGS 449
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
G+LG + L P RV L I +A G HS AL + G ++AWG + G+LG
Sbjct: 450 GELGDGTTT---DRLTPVRVSGLSNITA--LAAGTGHSLALGADGTVWAWGLNFHGELGD 504
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
G T R +P+ V GV VA G H++ DG + WG+N G+
Sbjct: 505 G-------------TTVSRPLPVQVPGLTGVIAVAAGMYHSVALRNDGTVWAWGWNLKGE 551
Query: 377 AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSLK 418
+ +T P V G + +AAGG HS L +L+
Sbjct: 552 LGDGTTTQRESPVQVPGVTGAI-AVAAGGYHSLALLSDNTLR 592
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 107/256 (41%), Gaps = 38/256 (14%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A ++ WG N SG+ G +L P + G S +A G H+ A+
Sbjct: 437 ADGTVWAWGMNGSGELGDGTTTDRL-----TPVRVSGL-----SNITALAAGTGHSLALG 486
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
+DGT++ WG N G+LGDGT R P +V L V +++ G + + A+ NDGT
Sbjct: 487 ADGTVWAWGLNFHGELGDGTTVSRPLPVQVPGLTG--VIAVAAGMYHSVAL----RNDGT 540
Query: 139 ISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
+ W WG N G+ R T V+ G H +AL L+AWG
Sbjct: 541 V-----WAWGWNLKGELGDGTTTQRESPVQVPGVTGAIAVAAGGYHSLALLSDNTLRAWG 595
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
NE QLG G + +V L +T V G HS + + V+ +
Sbjct: 596 KNEDRQLGDGTNTDRHTAVQVSG-----------LTGVTSVFAGGGHSLILRNDQAVWAF 644
Query: 253 GLGSVGQLGHCSLQSG 268
G GQLG + SG
Sbjct: 645 GSDVSGQLGDGNTPSG 660
>gi|380012154|ref|XP_003690152.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like,
partial [Apis florea]
Length = 647
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 154/339 (45%), Gaps = 71/339 (20%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-A 123
+ I+CG EH+A + G LF +G+N++GQLG G + P VK L+ E V ++CG A
Sbjct: 28 ISISCGDEHSAVICQSGRLFVFGSNDWGQLGLGHKNHISKPSCVKVLKPEKVTHVACGRA 87
Query: 124 H---CTAAIAEPRENDGTISTSRLWVWGQNQ-------------GSNFPRLFWGAFTPNT 167
H CT A +++ G +Q ++ P L + + +
Sbjct: 88 HTLICTVA-------------EKIFACGSDQEGQLGRGISAIGDSASIPVLVYDSGPTGS 134
Query: 168 IICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL 227
I Q+ GS H +AL+ G + AWG N GQLG P I G +
Sbjct: 135 KIVQIVAGSHHSLALTSDGNVFAWGSNLEGQLGL---------PD-ISGLVNKPTKVHIP 184
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG---HCSLQSGDKEL-LPRRVVALDGI 283
E + Q++ G YHS ++ENG VY G G+LG + S Q K++ LP V+
Sbjct: 185 EPVKQINTGYYHSIFLTENGLVYVCGESESGKLGIDINFSTQIVPKQMQLPSPVIH---- 240
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
VACGG H+ LT K LY G + +GQLGLG +IP L +
Sbjct: 241 ----VACGGHHTVILTEKDNLYCTGSNSSGQLGLGTNVTEL------------HIPKL-L 283
Query: 344 PNG------VQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
P G + ++CG SHT + G+++ G +G+
Sbjct: 284 PRGALKNEKISHISCGESHTAILTESGKLYTCGDGRHGK 322
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 120/253 (47%), Gaps = 29/253 (11%)
Query: 57 PAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEG------RKH-PEKVK 109
P G S+ + I G H+ A+ SDG +F WG+N GQLG G + H PE VK
Sbjct: 131 PTG--SKIVQIVAGSHHSLALTSDGNVFAWGSNLEGQLGLPDISGLVNKPTKVHIPEPVK 188
Query: 110 QLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTII 169
Q+ + + SI + + G + +L + P+ P+ +I
Sbjct: 189 QINTGYYHSIFLTENGLVYVC------GESESGKLGIDINFSTQIVPKQMQ---LPSPVI 239
Query: 170 CQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVI-KGYAKFLDEAPELE 228
V+CG H V L+E L G N GQLG G L P+++ +G K E
Sbjct: 240 -HVACGGHHTVILTEKDNLYCTGSNSSGQLGLGTNVTELHIPKLLPRGALKN-------E 291
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
KI+ +SCGE H+A ++E+G++YT G G G+LG ++ EL V +FI ++
Sbjct: 292 KISHISCGESHTAILTESGKLYTCGDGRHGKLGLEENENNVHELT--FVQRYKELFISNI 349
Query: 289 ACGGVHSCALTSK 301
+CGG H+ + K
Sbjct: 350 SCGGCHTILIGQK 362
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 124/292 (42%), Gaps = 52/292 (17%)
Query: 138 TISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
TI SR + N S+F F + +SCG H + + G L +G N++G
Sbjct: 6 TIGRSR---FADNVASHF-------FIRRDPVISISCGDEHSAVICQSGRLFVFGSNDWG 55
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG G + P +K + EK+T V+CG H+ + +++ G
Sbjct: 56 QLGLGHK-NHISKPSCVK--------VLKPEKVTHVACGRAHTLICTVAEKIFACGSDQE 106
Query: 258 GQLGHCSLQSGDKELLPRRVVALD----GIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
GQLG GD +P V+ D G I + G HS ALTS G ++AWG + G
Sbjct: 107 GQLGRGISAIGDSASIP--VLVYDSGPTGSKIVQIVAGSHHSLALTSDGNVFAWGSNLEG 164
Query: 314 QLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQLVACGHSHTLVYMRDGRIHGWGYN 372
QLGL P+ S N P V +P V+ + G+ H++ +G ++ G +
Sbjct: 165 QLGL----------PDISG--LVNKPTKVHIPEPVKQINTGYYHSIFLTENGLVYVCGES 212
Query: 373 SYGQAANEKS-------TYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSL 417
G+ + + PSPV +A GG H+ +L + +L
Sbjct: 213 ESGKLGIDINFSTQIVPKQMQLPSPVIH-------VACGGHHTVILTEKDNL 257
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 55/118 (46%), Gaps = 6/118 (5%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y G N SGQ G +L IPK LP A N + I+CG HTA +
Sbjct: 254 KDNLYCTGSNSSGQLGLGTNVTELHIPKLLPR-----GALKNEKISHISCGESHTAILTE 308
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEK-VKQLQSEFVKSISCGAHCTAAIAEPREND 136
G L+T G G+LG E H V++ + F+ +ISCG T I + RE +
Sbjct: 309 SGKLYTCGDGRHGKLGLEENENNVHELTFVQRYKELFISNISCGGCHTILIGQKRETN 366
>gi|196012989|ref|XP_002116356.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
gi|190580947|gb|EDV21026.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
Length = 4253
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 150/338 (44%), Gaps = 87/338 (25%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G ERQ R P+Q+ A L +ACGH+H+A V DG
Sbjct: 3513 VFSWGDGDYGKLGHGNSERQRR-PRQIE-------ALRGEDVLHVACGHKHSAIVTVDGK 3564
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+GA++ G+LG G +K P +V LQ V+ I+CGA+ T + RE+
Sbjct: 3565 LFTFGASDLGRLGLGNTSNKKLPAQVTALQPIMVELIACGANHTVVVTTDRES------- 3617
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+W +G+ EYGQLG G
Sbjct: 3618 -VWTFGE--------------------------------------------GEYGQLGLG 3632
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T + P+ + ++K I ++ CG + A+++ G+VY+ G +
Sbjct: 3633 RTTAKMT-PQYVDAFSKL--------NIKKICCGARFTLALTKEGKVYSCGHNRCNGIFE 3683
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
Q D P++V+AL FI+D+A G H+ ALT +G +++WG GQLGLG QT
Sbjct: 3684 VDTQHAD--YYPQQVMALSEQFIEDIAAGYEHALALTKEGDVWSWGNDTDGQLGLG-QT- 3739
Query: 323 SFSLIPNESDTYFRNIPILVVP---NGVQLVACGHSHT 357
+P P L+ G++ ++ GH+H+
Sbjct: 3740 ----LPQRE-------PCLISSLQGKGIRQISAGHNHS 3766
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 144/331 (43%), Gaps = 55/331 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLP-----------------------PELFGC 56
+S +YVWG N S Q G E+ L IP P P+L
Sbjct: 404 ESHVYVWGSNSSYQLGISEPEKML-IPHLTPSFANSEQGNYGRLGLGDSSNQNRPKLIRF 462
Query: 57 PAGANSRWLDIACGHE-HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK-QLQSE 114
+ L + G + HT A+ASDG +++WG ++G+LG G +K P+ + +Q +
Sbjct: 463 EHECKIKNLVSSKGSDGHTLAIASDGRIYSWGDGDYGKLGHGNHVTQKSPKLILGPMQGK 522
Query: 115 FVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTI 168
V+ I+ G +AAI S L+ WG G N R T
Sbjct: 523 VVRQIAVGYRHSAAIT---------SEGLLYTWGDGDYGRLGHGDNHSRSIPTLVKDITG 573
Query: 169 ICQVSCGSVHVVALSE-CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL 227
+ VSCGS V +S+ + ++G + G+LG G T + P+VI L
Sbjct: 574 VGSVSCGSSFTVVISQDATTVWSFGAGDNGKLGHGDTSR-VYRPKVISNLQGLL------ 626
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
I +V C S A++ G+V+ WG G G Q+ L+P+R+ + I D
Sbjct: 627 --IRKVCCASQSSLALTSIGQVFVWGSGPCLGYG----QADATFLVPKRLDEFQDLQIID 680
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLG 318
+A G H ALT +Y+WG + +GQ GLG
Sbjct: 681 IAVGDNHCLALTCDNDVYSWGNNASGQCGLG 711
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 168/421 (39%), Gaps = 97/421 (23%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
MD I T RP D + AK Y WG GQ GR L P L
Sbjct: 3386 MDREIIEWVTDRPQDWKMSAKCEAYTWGGGRHGQLAESGR-------LVLQPTL----TS 3434
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQ----SEF 115
+ S+ I CGH T + DGT+ G +G+LG G + + LQ +E
Sbjct: 3435 SFSKAKQIHCGHNSTFVIEHDGTVLACGEGSYGRLGQGNSDDLPRLRPITALQGFVVTEL 3494
Query: 116 VKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCG 175
S H + A+ E T ++ WG
Sbjct: 3495 ATSTGLEGH-SLALTE---------TGEVFSWGD-------------------------- 3518
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
+YG+LG G E + PR I EA E + V+C
Sbjct: 3519 ------------------GDYGKLGHG-NSERQRRPRQI--------EALRGEDVLHVAC 3551
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
G HSA V+ +G+++T+G +G+LG L + + LP +V AL I ++ +ACG H+
Sbjct: 3552 GHKHSAIVTVDGKLFTFGASDLGRLG---LGNTSNKKLPAQVTALQPIMVELIACGANHT 3608
Query: 296 CALTS-KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGH 354
+T+ + +++ +G + GQLGLG T + P D + + ++ + CG
Sbjct: 3609 VVVTTDRESVWTFGEGEYGQLGLGRTTAKMT--PQYVDAFSK--------LNIKKICCGA 3658
Query: 355 SHTLVYMRDGRIHGWGYNSYGQAANEKSTYA-WYPSPVDWCVGE--VRKLAAGGGHSAVL 411
TL ++G+++ G+N + +A +YP V + E + +AAG H+ L
Sbjct: 3659 RFTLALTKEGKVYSCGHNRCNGIFEVDTQHADYYPQQV-MALSEQFIEDIAAGYEHALAL 3717
Query: 412 A 412
Sbjct: 3718 T 3718
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 129/295 (43%), Gaps = 43/295 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I + IY WG G+ G + ++ P + G G R IA G+ H+AA
Sbjct: 484 IASDGRIYSWGDGDYGKLGHGNH-----VTQKSPKLILGPMQGKVVR--QIAVGYRHSAA 536
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ S+G L+TWG ++G+LG G R P VK + V S+SCG+ T I++ D
Sbjct: 537 ITSEGLLYTWGDGDYGRLGHGDNHSRSIPTLVKDITG--VGSVSCGSSFTVVISQ----D 590
Query: 137 GTISTSRLWVWGQNQGSN-------FPRLFWGAFTPN---TIICQVSCGSVHVVALSECG 186
T VW G N R++ N +I +V C S +AL+ G
Sbjct: 591 ATT------VWSFGAGDNGKLGHGDTSRVYRPKVISNLQGLLIRKVCCASQSSLALTSIG 644
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ WG C G K LDE +L+ I ++ G+ H A++ +
Sbjct: 645 QVFVWGSGP---------CLGYGQADATFLVPKRLDEFQDLQ-IIDIAVGDNHCLALTCD 694
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKE-LLPRRVVALDGIFIKDVACGGVHSCALTS 300
+VY+WG + GQ C L + + LLPR+V D I ++ G HS A T+
Sbjct: 695 NDVYSWGNNASGQ---CGLGNNNSPVLLPRKVTGFDNHVIYQISVGTSHSIAWTA 746
>gi|225451993|ref|XP_002283479.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
gi|296087299|emb|CBI33673.3| unnamed protein product [Vitis vinifera]
Length = 395
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 164/358 (45%), Gaps = 52/358 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N G G + IP Q+ A AN++ + A G H AV G
Sbjct: 60 LFTWGWNQRGTLGHPPETKTENIPSQVK-------ALANAKIVQAAIGGWHCLAVDDQGR 112
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG---TI 139
+ WG NE+GQ G+ PE+ + I+ C + ++ + G ++
Sbjct: 113 AYAWGGNEYGQCGE-------EPERKDDTGRPLRRDITIPQRCASKLSVRQVAAGGTHSV 165
Query: 140 STSR---LWVWGQNQGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECGLLQAW 191
+R +W WGQ + TP + + ++ G+ H +AL E G+L AW
Sbjct: 166 VLTREGHVWTWGQPWPPGDIKQI---STPVRVQGLEKVRLIAVGAFHNLALLEDGILWAW 222
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G NEYGQLG G T Q P ++G + + ++ G +HS A++++G VY
Sbjct: 223 GNNEYGQLGTGDTQPRSQ-PIAVQGLSDL--------TLVDIAAGGWHSTALTDDGGVYG 273
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG G G+LG +S +++P++V L I ++CGG HS ALT G ++++G
Sbjct: 274 WGRGEHGRLGFGDDKS--SKMVPQKVQLLVEENIVQISCGGTHSVALTRDGRMFSFGRGD 331
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG--------VQLVACGHSHTLVYM 361
G+LG G + + P E N+P +G +LVACG HTL +
Sbjct: 332 HGRLGYGRKVTTGH--PMEVPI---NLPPATNLSGSGAGGHWCSKLVACGGRHTLAIV 384
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 154/365 (42%), Gaps = 79/365 (21%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ +WG+ E GQLG G E ++ VK L ++ V S+ G+ + AI E DG
Sbjct: 8 IISWGSGEDGQLGIGNNEEKEWVCAVKALAAQNVCSVVAGSRNSLAICE----DG----- 58
Query: 143 RLWVWGQNQ-----------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
+L+ WG NQ N P N I Q + G H +A+ + G AW
Sbjct: 59 KLFTWGWNQRGTLGHPPETKTENIPSQV--KALANAKIVQAAIGGWHCLAVDDQGRAYAW 116
Query: 192 GYNEYGQLG--------------RGIT----CEGLQGPRVI------------------- 214
G NEYGQ G R IT C R +
Sbjct: 117 GGNEYGQCGEEPERKDDTGRPLRRDITIPQRCASKLSVRQVAAGGTHSVVLTREGHVWTW 176
Query: 215 -----KGYAKFLDEAPELEKITQV---SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQ 266
G K + ++ + +V + G +H+ A+ E+G ++ WG GQLG Q
Sbjct: 177 GQPWPPGDIKQISTPVRVQGLEKVRLIAVGAFHNLALLEDGILWAWGNNEYGQLGTGDTQ 236
Query: 267 SGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSL 326
+ P V L + + D+A GG HS ALT G +Y WG + G+LG G +S +
Sbjct: 237 PRSQ---PIAVQGLSDLTLVDIAAGGWHSTALTDDGGVYGWGRGEHGRLGFG-DDKSSKM 292
Query: 327 IPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAW 386
+P + + +LV N VQ ++CG +H++ RDGR+ +G +G+ +
Sbjct: 293 VP-------QKVQLLVEENIVQ-ISCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKVTTG 344
Query: 387 YPSPV 391
+P V
Sbjct: 345 HPMEV 349
>gi|134025900|gb|AAI34575.1| RPGR protein [Bos taurus]
Length = 620
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 150/308 (48%), Gaps = 43/308 (13%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
+ ++CG EHTA + LF +G+N +GQLG G++ P +K L+ E VK ++CG +
Sbjct: 83 ISLSCGDEHTAITTGNNKLFMFGSNNWGQLGLGSKATVNKPTCIKALKPEKVKFVACGRN 142
Query: 125 CTAAI-------AEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSV 177
T + A N+G +L + ++ S F + + FT I Q+S GS
Sbjct: 143 HTLILTGGGQVYATGGNNEG-----QLGLGDTDERSAFHLISF--FTSQHKIKQLSAGSN 195
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL-----EKITQ 232
AL+ G L +G E G+LG P+++ + + P+L EK+ Q
Sbjct: 196 TSAALTAEGELYTFGEPESGKLGL--------PPKLLVNH-----KVPQLVPGISEKVIQ 242
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
V+CG H+ ++E VYT+GLG GQLG + E P+ + ++ I V CG
Sbjct: 243 VACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFTFETSE--PKVIESVKDKKISHVCCGE 299
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVAC 352
H+ +T G LY +G + G+LGLG + + +P ++ + I V LVAC
Sbjct: 300 NHTALITESGLLYTFGDGRHGKLGLGMENFTNQFVPTLCSSFLKYI--------VHLVAC 351
Query: 353 GHSHTLVY 360
G H LV+
Sbjct: 352 GGCHMLVF 359
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 151/356 (42%), Gaps = 58/356 (16%)
Query: 72 EHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
E V G +FT+G +F + P K + + S+SCG TA
Sbjct: 48 EPDKMVPDSGAVFTFGKTKFAE---------NMPSKF-WFKRDIPISLSCGDEHTAI--- 94
Query: 132 PRENDGTISTSRLWVWGQNQGSNFPRLFWGA-FTPNTIICQ----------VSCGSVHVV 180
T ++L+++G N N+ +L G+ T N C V+CG H +
Sbjct: 95 ------TTGNNKLFMFGSN---NWGQLGLGSKATVNKPTCIKALKPEKVKFVACGRNHTL 145
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
L+ G + A G N GQLG G T E R F KI Q+S G S
Sbjct: 146 ILTGGGQVYATGGNNEGQLGLGDTDE-----RSAFHLISFFTSQ---HKIKQLSAGSNTS 197
Query: 241 AAVSENGEVYTWGLGSVGQLG-HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT 299
AA++ GE+YT+G G+LG L K +P+ V + I+ VACGG H+ LT
Sbjct: 198 AALTAEGELYTFGEPESGKLGLPPKLLVNHK--VPQLVPGISEKVIQ-VACGGGHTVVLT 254
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
K A+Y +G Q GQLGLG +F+ +E V + V CG +HT +
Sbjct: 255 EK-AVYTFGLGQFGQLGLG----TFTFETSEPKVIES-----VKDKKISHVCCGENHTAL 304
Query: 360 YMRDGRIHGWGYNSYGQ--AANEKSTYAWYPSPVDWCVGEVRKLAA-GGGHSAVLA 412
G ++ +G +G+ E T + P+ + + L A GG H V A
Sbjct: 305 ITESGLLYTFGDGRHGKLGLGMENFTNQFVPTLCSSFLKYIVHLVACGGCHMLVFA 360
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 87/183 (47%), Gaps = 14/183 (7%)
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
+SCG+ H+A + N +++ +G + GQLG S + +K P + AL +K VACG
Sbjct: 85 LSCGDEHTAITTGNNKLFMFGSNNWGQLGLGSKATVNK---PTCIKALKPEKVKFVACGR 141
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVAC 352
H+ LT G +YA GG+ GQLGLG + + F I + ++ ++
Sbjct: 142 NHTLILTGGGQVYATGGNNEGQLGLGD---------TDERSAFHLISFFTSQHKIKQLSA 192
Query: 353 GHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSP--VDWCVGEVRKLAAGGGHSAV 410
G + + +G ++ +G G+ + P V +V ++A GGGH+ V
Sbjct: 193 GSNTSAALTAEGELYTFGEPESGKLGLPPKLLVNHKVPQLVPGISEKVIQVACGGGHTVV 252
Query: 411 LAD 413
L +
Sbjct: 253 LTE 255
>gi|147899463|ref|NP_001085604.1| HECT and RLD domain containing E3 ubiquitin protein ligase 3
[Xenopus laevis]
gi|49256123|gb|AAH73004.1| MGC82587 protein [Xenopus laevis]
Length = 1050
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/264 (35%), Positives = 132/264 (50%), Gaps = 34/264 (12%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCG-AH 124
IACG H+ A++ G L++WGA GQLG T E + P +K+L + ++ +SCG H
Sbjct: 89 IACGQSHSLALSLQGNLYSWGAGNDGQLGHATVEHYSRIPRIIKKLSQQKIQQMSCGDDH 148
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSN--FPRLFWGAFTPNTI-------ICQVSCG 175
C A +DG +L+ WGQN F +P + + QV+ G
Sbjct: 149 CLAL-----GDDG-----QLFTWGQNTHGQLGLGNGFISQSSPQKVKSLEGIPLAQVTAG 198
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
H ALS G + WG N GQLG + + P +K K+ +SC
Sbjct: 199 GSHSFALSLSGAVFGWGKNSAGQLGLNDE-QVKETPCHVKPL--------RTHKVVYISC 249
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
GE H+A +++ G ++T+G G GQLGH SL + E+ PRRV+ L G + +ACG H+
Sbjct: 250 GEEHTAILTKAGGLFTFGAGGSGQLGHDSLHN---EINPRRVLELMGSEVSQIACGRKHT 306
Query: 296 CALT-SKGALYAWGGSQAGQLGLG 318
A S G LYA+G GQLG G
Sbjct: 307 LAFVPSSGTLYAFGCGDLGQLGTG 330
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 160/337 (47%), Gaps = 42/337 (12%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG + FGQLG+G + P + VK ++CG T + E DG +
Sbjct: 1 MLCWGHSAFGQLGNGHSLKNAVSEPCACTFSLATCVKEVACGGKHTLFLME----DGQVY 56
Query: 141 TSRLWVWGQ----NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
+ GQ ++G++ + A I ++CG H +ALS G L +WG
Sbjct: 57 SCGWNGEGQLGHSHEGTHPAPV---ATLAEEHIKHIACGQSHSLALSLQGNLYSWGAGND 113
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG + PR+IK ++ +KI Q+SCG+ H A+ ++G+++TWG +
Sbjct: 114 GQLGHATVEHYSRIPRIIKKLSQ--------QKIQQMSCGDDHCLALGDDGQLFTWGQNT 165
Query: 257 VGQLGHCSLQSG-DKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
GQLG L +G + P++V +L+GI + V GG HS AL+ GA++ WG + AGQL
Sbjct: 166 HGQLG---LGNGFISQSSPQKVKSLEGIPLAQVTAGGSHSFALSLSGAVFGWGKNSAGQL 222
Query: 316 GLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDGRIHGWGYN 372
GL +D + P V P + V ++CG HT + + G + +G
Sbjct: 223 GL-------------NDEQVKETPCHVKPLRTHKVVYISCGEEHTAILTKAGGLFTFGAG 269
Query: 373 SYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
GQ ++ P V +G EV ++A G H+
Sbjct: 270 GSGQLGHDSLHNEINPRRVLELMGSEVSQIACGRKHT 306
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 113/252 (44%), Gaps = 41/252 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG + GQ G E RIP+ + + + ++CG +H A+ DG
Sbjct: 105 LYSWGAGNDGQLGHATVEHYSRIPRIIKKL-------SQQKIQQMSCGDDHCLALGDDGQ 157
Query: 83 LFTWGANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
LFTWG N GQLG G + P+KVK L+ + ++ G + A++ +
Sbjct: 158 LFTWGQNTHGQLGLGNGFISQSSPQKVKSLEGIPLAQVTAGGSHSFALS---------LS 208
Query: 142 SRLWVWGQNQ----GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQA 190
++ WG+N G N ++ TP + + +SCG H L++ G L
Sbjct: 209 GAVFGWGKNSAGQLGLNDEQV---KETPCHVKPLRTHKVVYISCGEEHTAILTKAGGLFT 265
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEV 249
+G GQLG + RV++ +++Q++CG H+ A V +G +
Sbjct: 266 FGAGGSGQLGHDSLHNEINPRRVLELMG---------SEVSQIACGRKHTLAFVPSSGTL 316
Query: 250 YTWGLGSVGQLG 261
Y +G G +GQLG
Sbjct: 317 YAFGCGDLGQLG 328
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 8/109 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A++ WG N +GQ G + + P + P + + I+CG EHTA + G
Sbjct: 210 AVFGWGKNSAGQLGLNDEQVK-ETPCHVKPL-------RTHKVVYISCGEEHTAILTKAG 261
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIA 130
LFT+GA GQLG + +P +V +L V I+CG T A
Sbjct: 262 GLFTFGAGGSGQLGHDSLHNEINPRRVLELMGSEVSQIACGRKHTLAFV 310
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA-VASDG 81
++ +G SGQ G ++ + L EL G S IACG +HT A V S G
Sbjct: 263 LFTFGAGGSGQLGHDSLHNEINPRRVL--ELMG------SEVSQIACGRKHTLAFVPSSG 314
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVK 109
TL+ +G + GQLG G E K P VK
Sbjct: 315 TLYAFGCGDLGQLGTGHENNVKCPTVVK 342
>gi|431911479|gb|ELK13685.1| Putative E3 ubiquitin-protein ligase HERC6 [Pteropus alecto]
Length = 1010
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 150/356 (42%), Gaps = 72/356 (20%)
Query: 68 ACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTA 127
ACG H+ + SDGT+ + G N GQLG + + P +K L++
Sbjct: 27 ACGERHSLLLLSDGTVHSCGDNTQGQLGRRGKPREERPGLIKALET-------------- 72
Query: 128 AIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
++ VSCG H +A+ G
Sbjct: 73 ---------------------------------------LLVGLVSCGKEHSLAVCHKGR 93
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWG GQLG E + P+ IK KI QVSCG YHS A+SE+G
Sbjct: 94 VFAWGAGSEGQLGIEECKEKIFTPKKIKTLTGI--------KIIQVSCGHYHSLALSEDG 145
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
+VY+WG S GQLG + + P+RV +L+GI + VA GG HS AL+ G + W
Sbjct: 146 QVYSWGKNSQGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGW 203
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G + GQL L S +++ ++ + +CG+ HT V ++G++
Sbjct: 204 GSNNTGQLALSGNNTPVQRYKPHSIGALKSLDVIYI-------SCGYEHTAVLTQNGKVF 256
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSLKELCEF 423
+G NS GQ + P V+ G V ++ G H+ LA + E+ F
Sbjct: 257 TFGDNSCGQLGYNPTAKKRGPQQVEGIDGLVSQIDCGSYHT--LAYVYTTGEVVSF 310
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 143/301 (47%), Gaps = 54/301 (17%)
Query: 27 GYNHSGQTGRKGRERQLR--IPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
G N GQ GR+G+ R+ R + K L L G ++CG EH+ AV G +F
Sbjct: 46 GDNTQGQLGRRGKPREERPGLIKALETLLVGL----------VSCGKEHSLAVCHKGRVF 95
Query: 85 TWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSR 143
WGA GQLG + +E P+K+K L + +SCG + + A++E DG +
Sbjct: 96 AWGAGSEGQLGIEECKEKIFTPKKIKTLTGIKIIQVSCGHYHSLALSE----DGQV---- 147
Query: 144 LWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQA 190
+ WG+N G FP +P + + QV+ G H ALS G
Sbjct: 148 -YSWGKNSQGQLGLGKEFP----SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFG 202
Query: 191 WGYNEYGQLGRGITCEGLQ--GPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG N GQL +Q P I G K LD + +SCG H+A +++NG+
Sbjct: 203 WGSNNTGQLALSGNNTPVQRYKPHSI-GALKSLD-------VIYISCGYEHTAVLTQNGK 254
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA-LTSKGALYAW 307
V+T+G S GQLG+ K+ P++V +DG+ + + CG H+ A + + G + ++
Sbjct: 255 VFTFGDNSCGQLGY---NPTAKKRGPQQVEGIDGL-VSQIDCGSYHTLAYVYTTGEVVSF 310
Query: 308 G 308
G
Sbjct: 311 G 311
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 95/188 (50%), Gaps = 18/188 (9%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
++ Q +CGE HS + +G V++ G + GQLG + +E P + AL+ + + V
Sbjct: 22 EVRQAACGERHSLLLLSDGTVHSCGDNTQGQLGR---RGKPREERPGLIKALETLLVGLV 78
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
+CG HS A+ KG ++AWG GQLG+ + + P + T G++
Sbjct: 79 SCGKEHSLAVCHKGRVFAWGAGSEGQLGI-EECKEKIFTPKKIKTL----------TGIK 127
Query: 349 L--VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAG 404
+ V+CGH H+L DG+++ WG NS GQ K + P V G + ++AAG
Sbjct: 128 IIQVSCGHYHSLALSEDGQVYSWGKNSQGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAG 187
Query: 405 GGHSAVLA 412
G HS L+
Sbjct: 188 GAHSFALS 195
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 119/252 (47%), Gaps = 45/252 (17%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG GQ G + + ++ PK++ L G + + ++CGH H+ A++
Sbjct: 91 KGRVFAWGAGSEGQLGIEECKEKIFTPKKIKT-LTGI------KIIQVSCGHYHSLALSE 143
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG +++WG N GQLG G E + P++V+ L+ + ++ G + A++ + G
Sbjct: 144 DGQVYSWGKNSQGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFG- 202
Query: 139 ISTSRLWVWGQNQ-------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSE 184
WG N G+N P + P++I + +SCG H L++
Sbjct: 203 --------WGSNNTGQLALSGNNTPV---QRYKPHSIGALKSLDVIYISCGYEHTAVLTQ 251
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-V 243
G + +G N GQLG T + +GP+ ++G ++Q+ CG YH+ A V
Sbjct: 252 NGKVFTFGDNSCGQLGYNPTAKK-RGPQQVEGIDGL---------VSQIDCGSYHTLAYV 301
Query: 244 SENGEVYTWGLG 255
GEV ++G G
Sbjct: 302 YTTGEVVSFGRG 313
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 12/131 (9%)
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP 344
++ ACG HS L S G +++ G + GQLG + R E + + L+
Sbjct: 23 VRQAACGERHSLLLLSDGTVHSCGDNTQGQLGRRGKPRE------ERPGLIKALETLL-- 74
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWY-PSPVDWCVG-EVRKLA 402
V LV+CG H+L GR+ WG S GQ E+ + P + G ++ +++
Sbjct: 75 --VGLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIEECKEKIFTPKKIKTLTGIKIIQVS 132
Query: 403 AGGGHSAVLAD 413
G HS L++
Sbjct: 133 CGHYHSLALSE 143
>gi|348567198|ref|XP_003469388.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Cavia porcellus]
Length = 780
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 113/370 (30%), Positives = 172/370 (46%), Gaps = 56/370 (15%)
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
N + ++CG EHTA V + L+ +G+N +GQLG G++ K P VK L+ E V+ +
Sbjct: 34 NDIPMYLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSDVKKPTCVKALKPEKVQFAA 93
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQNQG----------SNFPRLFWGAFTPNTIIC 170
CG + T + T+ + G N+G + F R+ + FT I
Sbjct: 94 CGRNHTLIL--------TVVGNVYAAGGNNEGQLGLGDTEERNTFHRISF--FTSEHNIK 143
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
Q+S GS ALSE G L WG N GQ+G +V G + I
Sbjct: 144 QLSAGSNTSAALSEDGRLFMWGDNSEGQIGLNDVISVCVPHQVNIG-----------KPI 192
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL-----PRRVVALDGIFI 285
+ +SCG YHSA V+ +GE+YT+G G+LG KELL P+ V + I
Sbjct: 193 SWISCGYYHSAFVTMDGELYTFGEPESGKLGL------PKELLINHRTPQLVAGIPEKVI 246
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
+ VACGG H+ LT K A+Y +G Q GQLGLG T F + + +N
Sbjct: 247 Q-VACGGGHTVVLTEK-AVYTFGLGQFGQLGLG--TFCFETLEPKVIEQIKN-------Q 295
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV---DWCVGEVRKLA 402
+ ++CG +HT + G ++ +G +G+ ++ P+ ++ V+ +A
Sbjct: 296 KITYISCGENHTALISDIGLMYTFGDGRHGKLGLGLENFSNQFFPILCSEFLRFTVQLVA 355
Query: 403 AGGGHSAVLA 412
GG + V A
Sbjct: 356 CGGCQTLVFA 365
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 122/284 (42%), Gaps = 51/284 (17%)
Query: 144 LWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
++ +G+ + N P FW N I +SCG H ++ L +G N +GQLG G
Sbjct: 14 VFTFGKTKFAENMPSKFWFK---NDIPMYLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLG 70
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
+ ++ P +K A + EK+ +CG H+ ++ G VY G + GQLG
Sbjct: 71 SKSD-VKKPTCVK--------ALKPEKVQFAACGRNHTLILTVVGNVYAAGGNNEGQLGL 121
Query: 263 CSLQSGDKELLPRRVVALDGIF-----IKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GD E R F IK ++ G S AL+ G L+ WG + GQ+GL
Sbjct: 122 -----GDTE--ERNTFHRISFFTSEHNIKQLSAGSNTSAALSEDGRLFMWGDNSEGQIGL 174
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQL------VACGHSHTLVYMRDGRIHGWGY 371
++ + VP+ V + ++CG+ H+ DG ++ +G
Sbjct: 175 ------------------NDVISVCVPHQVNIGKPISWISCGYYHSAFVTMDGELYTFGE 216
Query: 372 NSYGQAANEKSTYAWYPSP--VDWCVGEVRKLAAGGGHSAVLAD 413
G+ K + +P V +V ++A GGGH+ VL +
Sbjct: 217 PESGKLGLPKELLINHRTPQLVAGIPEKVIQVACGGGHTVVLTE 260
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 85/195 (43%), Gaps = 38/195 (19%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+++WG N GQ G + +P Q+ G W I+CG+ H+A V DG
Sbjct: 161 LFMWGDNSEGQIGLNDV-ISVCVPHQV-------NIGKPISW--ISCGYYHSAFVTMDGE 210
Query: 83 LFTWGANEFGQLGDGTEEGRKH--PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
L+T+G E G+LG E H P+ V + + ++ ++CG T + E
Sbjct: 211 LYTFGEPESGKLGLPKELLINHRTPQLVAGIPEKVIQ-VACGGGHTVVLTE--------- 260
Query: 141 TSRLWVWGQNQGSNFPRLFWGAF------------TPNTIICQVSCGSVHVVALSECGLL 188
++ +G Q F +L G F N I +SCG H +S+ GL+
Sbjct: 261 -KAVYTFGLGQ---FGQLGLGTFCFETLEPKVIEQIKNQKITYISCGENHTALISDIGLM 316
Query: 189 QAWGYNEYGQLGRGI 203
+G +G+LG G+
Sbjct: 317 YTFGDGRHGKLGLGL 331
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 55/129 (42%), Gaps = 18/129 (13%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + A+Y +G GQ G + PK + N + I+CG HTA
Sbjct: 257 VLTEKAVYTFGLGQFGQLGLGTFCFETLEPKVIE-------QIKNQKITYISCGENHTAL 309
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF----VKSISCGAHCTAAIAEP 132
++ G ++T+G G+LG G E + L SEF V+ ++CG T A P
Sbjct: 310 ISDIGLMYTFGDGRHGKLGLGLENFSNQFFPI--LCSEFLRFTVQLVACGGCQTLVFAAP 367
Query: 133 R-----END 136
R END
Sbjct: 368 RIDVVGEND 376
>gi|340721971|ref|XP_003399386.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
terrestris]
Length = 539
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 146/315 (46%), Gaps = 52/315 (16%)
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTAAIAE 131
T V D ++ G N +G LG G +P+K++ L + VK+ + G H A E
Sbjct: 39 TLIVTKDDMVYGIGNNTYGCLGTGDTHSTIYPKKIEALCGKSVKTFAYGKGPHVLALTEE 98
Query: 132 PRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVA 181
+++ WG N P L A N + ++CG H +A
Sbjct: 99 ----------GKVYSWGYNDYCELGNRSTNEGLTPTLIPSALN-NEFVVDIACGGHHSLA 147
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
L+ G + AWG+N GQ+G G +Q K L +K+ +SCG+ S
Sbjct: 148 LTNKGEVYAWGHNVSGQVGCGTILSTVQ------PIPKLLHIVLNGKKVVHISCGDSSSV 201
Query: 242 AVSENGEVYTWGLGSVGQL--GHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT 299
AV++NGEVY+WG VGQL G+C+ Q+ P++V I I+ V CG +H+ AL+
Sbjct: 202 AVTDNGEVYSWGHNGVGQLGIGNCTSQAE-----PQKVATFAKIVIEKVVCGYMHTLALS 256
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHT 357
+G LY WG + GQLGL T S IP + L VP ++ +A H H
Sbjct: 257 DEGDLYVWGANSYGQLGLN--TDSNVWIPTK----------LQVPEMGRILDIATSHYHH 304
Query: 358 L-VYMRDG-RIHGWG 370
+ + M +G RI WG
Sbjct: 305 ISLAMSEGNRIFMWG 319
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 120/236 (50%), Gaps = 19/236 (8%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HV+AL+E G + +WGYN+Y +LG T EGL P +I A E + ++CG
Sbjct: 91 HVLALTEEGKVYSWGYNDYCELGNRSTNEGLT-PTLIPS-------ALNNEFVVDIACGG 142
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
+HS A++ GEVY WG GQ+G ++ S + + + L+G + ++CG S A
Sbjct: 143 HHSLALTNKGEVYAWGHNVSGQVGCGTILSTVQPIPKLLHIVLNGKKVVHISCGDSSSVA 202
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT 357
+T G +Y+WG + GQLG+G T P + T+ + + ++ V CG+ HT
Sbjct: 203 VTDNGEVYSWGHNGVGQLGIGNCTSQAE--PQKVATFAKIV--------IEKVVCGYMHT 252
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLA 412
L +G ++ WG NSYGQ + W P+ + +G + +A H LA
Sbjct: 253 LALSDEGDLYVWGANSYGQLGLNTDSNVWIPTKLQVPEMGRILDIATSHYHHISLA 308
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/440 (23%), Positives = 177/440 (40%), Gaps = 84/440 (19%)
Query: 73 HTAAVASDGTLFTWGANEFGQLGD-GTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
H A+ +G +++WG N++ +LG+ T EG L +EFV I+CG H + A+
Sbjct: 91 HVLALTEEGKVYSWGYNDYCELGNRSTNEGLTPTLIPSALNNEFVVDIACGGHHSLALTN 150
Query: 132 PRENDGTISTSRLWVWGQNQGSN------------FPRLFWGAFTPNTIICQVSCGSVHV 179
E ++ WG N P+L ++ +SCG
Sbjct: 151 KGE---------VYAWGHNVSGQVGCGTILSTVQPIPKLLHIVLNGKKVV-HISCGDSSS 200
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
VA+++ G + +WG+N GQLG G C P+ + +AK + I +V CG H
Sbjct: 201 VAVTDNGEVYSWGHNGVGQLGIG-NCTSQAEPQKVATFAKIV--------IEKVVCGYMH 251
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVH--SCA 297
+ A+S+ G++Y WG S GQLG L + +P ++ + I D+A H S A
Sbjct: 252 TLALSDEGDLYVWGANSYGQLG---LNTDSNVWIPTKLQVPEMGRILDIATSHYHHISLA 308
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIP----NESDTYFRNIPILVV---------- 343
++ ++ WG LG + +L P ++ Y+ P++
Sbjct: 309 MSEGNRIFMWGQC------LGQSIKVPTLTPLKCLYDALAYYAFPPVMHQPLNFHSDEEA 362
Query: 344 ------------PNGVQLVACG-----HSHTLV------YMRDGRIHGWGYNSYGQAANE 380
PN LV H H V Y R W NS +E
Sbjct: 363 NIANSLKNAFDDPNTSDLVIKVHGKPIHVHKAVLKIRCHYFRTMFQEHWVENSQSIIEHE 422
Query: 381 KSTYAWYPSPVDWCVGEVRKLAAGGGHSAV-LADACS---LKELCEFRLAESVTLSNASE 436
+ +Y Y + + + +L+ + LA+A S LK C + + +T+ N +
Sbjct: 423 QFSYDVYKTFLKYLYTNEVELSQENALELLDLANAYSENQLKRHCIQMINKKITVKNVAY 482
Query: 437 IEDVASRTGSEALARLCERL 456
+ ++ + ++ L C +
Sbjct: 483 LYSISIQYNAKELEEYCFKF 502
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 107/246 (43%), Gaps = 42/246 (17%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WGYN + G + L P +P L N +DIACG H+ A+ + G
Sbjct: 101 VYSWGYNDYCELGNRSTNEGLT-PTLIPSAL------NNEFVVDIACGGHHSLALTNKGE 153
Query: 83 LFTWGANEFGQLGDGTEEGRKHP-EKVKQ--LQSEFVKSISCGAHCTAAIAEPRENDGTI 139
++ WG N GQ+G GT P K+ L + V ISCG + A+ + E
Sbjct: 154 VYAWGHNVSGQVGCGTILSTVQPIPKLLHIVLNGKKVVHISCGDSSSVAVTDNGE----- 208
Query: 140 STSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQ 189
++ WG N P+ A +I +V CG +H +ALS+ G L
Sbjct: 209 ----VYSWGHNGVGQLGIGNCTSQAEPQKV--ATFAKIVIEKVVCGYMHTLALSDEGDLY 262
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH--SAAVSENG 247
WG N YGQLG T + P + + PE+ +I ++ YH S A+SE
Sbjct: 263 VWGANSYGQLGLN-TDSNVWIPTKL--------QVPEMGRILDIATSHYHHISLAMSEGN 313
Query: 248 EVYTWG 253
++ WG
Sbjct: 314 RIFMWG 319
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG+N GQ G Q P+++ A + CG+ HT A++ +G
Sbjct: 209 VYSWGHNGVGQLGIGNCTSQAE-PQKVA-------TFAKIVIEKVVCGYMHTLALSDEGD 260
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+ WGAN +GQLG T+ P K++ + + I+ + ++A N
Sbjct: 261 LYVWGANSYGQLGLNTDSNVWIPTKLQVPEMGRILDIATSHYHHISLAMSEGN------- 313
Query: 143 RLWVWGQ 149
R+++WGQ
Sbjct: 314 RIFMWGQ 320
>gi|74140658|dbj|BAB30628.3| unnamed protein product [Mus musculus]
Length = 590
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 114/367 (31%), Positives = 171/367 (46%), Gaps = 62/367 (16%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++CG EHTA V + L+ +G+N +GQLG G++ P +K L+ E VK +CG
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACG---- 133
Query: 127 AAIAEPRENDGTISTSRLWVW---GQNQG----------SNFPRLFWGAFTPNTIICQVS 173
N +ST V+ G N+G F ++ + FTP I Q+S
Sbjct: 134 -------RNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVF--FTPADTIKQLS 184
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
G+ AL+E G L WG N GQ+G V G + I+ +
Sbjct: 185 AGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVG-----------KPISWI 233
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL-----PRRVVALDGIFIKDV 288
SCG YHSA V+ +GE+YT+G G+LG ELL P+RV+ + I+ V
Sbjct: 234 SCGYYHSAFVTMDGELYTFGEPENGKLGL------PNELLMNHRSPQRVLGIPERVIQ-V 286
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
ACGG H+ LT K +YA+G Q GQLGLG +F +E R + +
Sbjct: 287 ACGGGHTVVLTEK-VVYAFGLGQFGQLGLG----TFLFETSEPKIIER-----IKDQKIC 336
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQ--AANEKSTYAWYPSPV-DWCVGEVRKLAAGG 405
++CG +HT + G ++ +G +G+ E T ++P+ ++ V+ +A GG
Sbjct: 337 HISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGG 396
Query: 406 GHSAVLA 412
H V A
Sbjct: 397 CHMLVFA 403
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 125/276 (45%), Gaps = 29/276 (10%)
Query: 141 TSRLWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
T ++ +G+ + N P FW F + IC +SCG H ++ L +G N +GQL
Sbjct: 49 TGAVFTFGKTKFAENIPSKFW--FKNDIPIC-LSCGDEHTAIVTGNNKLYMFGSNNWGQL 105
Query: 200 GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ 259
G G ++ P IK A + EK+ +CG H+ ++ G VY G + GQ
Sbjct: 106 GLGSKAAIIK-PTCIK--------ALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQ 156
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LG + D++ + V IK ++ G S ALT G L+ WG + GQ+GL
Sbjct: 157 LGLG--DTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGL-- 212
Query: 320 QTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ--A 377
+ +S IP+E + V + ++CG+ H+ DG ++ +G G+
Sbjct: 213 EDKSNVCIPHE----------VTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGL 262
Query: 378 ANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLAD 413
NE P V V ++A GGGH+ VL +
Sbjct: 263 PNELLMNHRSPQRVLGIPERVIQVACGGGHTVVLTE 298
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 89/195 (45%), Gaps = 38/195 (19%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+++WG N GQ G + + + IP ++ G W I+CG+ H+A V DG
Sbjct: 199 LFMWGDNSEGQIGLEDK-SNVCIPHEV-------TVGKPISW--ISCGYYHSAFVTMDGE 248
Query: 83 LFTWGANEFGQLGDGTEEGRKH--PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
L+T+G E G+LG E H P++V + E V ++CG T + E
Sbjct: 249 LYTFGEPENGKLGLPNELLMNHRSPQRVLGI-PERVIQVACGGGHTVVLTE--------- 298
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFT-----PNTI-------ICQVSCGSVHVVALSECGLL 188
++ +G Q F +L G F P I IC +SCG H ++E GLL
Sbjct: 299 -KVVYAFGLGQ---FGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLL 354
Query: 189 QAWGYNEYGQLGRGI 203
+G +G+LG G+
Sbjct: 355 YTFGDGRHGKLGLGM 369
>gi|196012194|ref|XP_002115960.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
gi|190581736|gb|EDV21812.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
Length = 897
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/345 (31%), Positives = 154/345 (44%), Gaps = 39/345 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+F WG GQLG G E V + +K ISCG + T + + DG I
Sbjct: 1 MFAWGKAIEGQLGLGGIDENCILKATHVDLTTNHTIKLISCGLNHTILLLQ----DGQIY 56
Query: 141 TSRLWVWGQN----QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
+ +GQ F R+ AF I S G+ H +A+++ + AWG N
Sbjct: 57 SCGSNDYGQTGRQRNNKRFARI--DAFESMRITNVSSNGANHNLAINDKNCIYAWGDNSD 114
Query: 197 GQLGRGITCEGLQ----GPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
GQLG +T + L+ PR IK +KF + QV+CG+ HS AV +G V++W
Sbjct: 115 GQLG--VTDQNLKQFYRTPRQIKSLSKF--------AVVQVACGQSHSLAVINDGTVFSW 164
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G GQLG + S + P++++ L G +I +A GG HS A+T+ GAL WG +
Sbjct: 165 GSNRYGQLG---IDSNVSSVEPKQILKLSGFYIVQIAAGGAHSLAITNSGALLTWGKNSF 221
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYN 372
GQLGLG S S + + ACG HT V ++G + +G
Sbjct: 222 GQLGLGTNDGVLSPTCVSS----------LRSQHIAYAACGEDHTAVLTKEGGVFTFGAG 271
Query: 373 SYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSL 417
S GQ + ++ P V +G V G A+ D SL
Sbjct: 272 SSGQLGHNSLSHHCSPQMVVDLMGIVVTQITCGRFYALQQDEVSL 316
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 138/309 (44%), Gaps = 47/309 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG GQ G G + I K +L N I+CG HT + DG
Sbjct: 1 MFAWGKAIEGQLGLGGIDENC-ILKATHVDL-----TTNHTIKLISCGLNHTILLLQDGQ 54
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
+++ G+N++GQ G + K ++ +S + ++S GA+ AI ND
Sbjct: 55 IYSCGSNDYGQ--TGRQRNNKRFARIDAFESMRITNVSSNGANHNLAI-----NDKNC-- 105
Query: 142 SRLWVWGQNQ-------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
++ WG N N + + TP I + QV+CG H +A+ G
Sbjct: 106 --IYAWGDNSDGQLGVTDQNLKQFYR---TPRQIKSLSKFAVVQVACGQSHSLAVINDGT 160
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ +WG N YGQLG ++ +++K + I Q++ G HS A++ +G
Sbjct: 161 VFSWGSNRYGQLGIDSNVSSVEPKQILKLSGFY---------IVQIAAGGAHSLAITNSG 211
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
+ TWG S GQLG L + D L P V +L I ACG H+ LT +G ++ +
Sbjct: 212 ALLTWGKNSFGQLG---LGTNDGVLSPTCVSSLRSQHIAYAACGEDHTAVLTKEGGVFTF 268
Query: 308 GGSQAGQLG 316
G +GQLG
Sbjct: 269 GAGSSGQLG 277
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 121/281 (43%), Gaps = 74/281 (26%)
Query: 17 IPAKSAIYVWGYNHSGQTG--RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHT 74
I K+ IY WG N GQ G + ++ R P+Q+ + + + +ACG H+
Sbjct: 100 INDKNCIYAWGDNSDGQLGVTDQNLKQFYRTPRQIK-------SLSKFAVVQVACGQSHS 152
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
AV +DGT+F+WG+N +GQLG + P+++ +L ++ I+ G + AI
Sbjct: 153 LAVINDGTVFSWGSNRYGQLGIDSNVSSVEPKQILKLSGFYIVQIAAGGAHSLAIT---- 208
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
N G + T WG+ N
Sbjct: 209 NSGALLT-----WGK--------------------------------------------N 219
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+GQLG G T +G+ P + + I +CGE H+A +++ G V+T+G
Sbjct: 220 SFGQLGLG-TNDGVLSPTCVSSLRS--------QHIAYAACGEDHTAVLTKEGGVFTFGA 270
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
GS GQLGH SL P+ VV L GI + + CG ++
Sbjct: 271 GSSGQLGHNSLS---HHCSPQMVVDLMGIVVTQITCGRFYA 308
>gi|328873771|gb|EGG22137.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 1859
Score = 124 bits (311), Expect = 1e-25, Method: Composition-based stats.
Identities = 117/407 (28%), Positives = 174/407 (42%), Gaps = 98/407 (24%)
Query: 9 ETARPVDNIPAKSAIYVWGYNHSGQTGRK--GRERQLRIPKQLPPELFGCPAGANSRWLD 66
+++R + + I WG + + + G K GRE+ P++LP F P
Sbjct: 576 DSSRSATQLDTQRGIMTWGSSSNCKLGFKTEGREQSQATPERLPN--FNIP-----EICS 628
Query: 67 IACGHEHTAAVASDGTLFTWGANE-----FGQLGDGTEEGRKHPEKVKQLQSEFVKSISC 121
I+CG ++AA+ +G ++ WG LG+G+ E + P KV+ L SE V +S
Sbjct: 629 ISCGSYYSAALTENGDVYMWGRGSVKNPPLSTLGNGSLEDQLLPTKVESL-SEVV-LVSI 686
Query: 122 GAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-----------IC 170
G + +AA+ S L WG + +L G TI +
Sbjct: 687 GYYHSAALK---------SNGELLTWGCGEDG---QLGHGDVLNQTIPKVVQTMTSHWVT 734
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGIT-------------------------- 204
QV CG H + L++ G + WG +EYGQLG G T
Sbjct: 735 QVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSLEKYNIIQIACGSTH 794
Query: 205 CEGLQGPR--VIKGYAKFLDEA---------PELE--KITQVSCGEYHSAAVSENGEVYT 251
C L R ++ G + A P L+ I ++SCG Y +AA++E G+VYT
Sbjct: 795 CAVLTNAREVLVFGNGAAMGSANIISVPMMVPALKHLNIERLSCGHYSTAALTECGDVYT 854
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG G +LGH + QS EL P+ V L I+ ++CGG H LT G +Y G
Sbjct: 855 WGSGQ--ELGHGTNQS---ELHPKLVDGLRSQSIRQISCGGRHMAFLTDSGKIYTCGKDP 909
Query: 312 AGQLG--LGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
GQLG G Q + P + D+ + I V+CG +H
Sbjct: 910 FGQLGHAQGDQNK-----PKKIDSLLKTTFI--------SVSCGENH 943
Score = 117 bits (293), Expect = 1e-23, Method: Composition-based stats.
Identities = 96/352 (27%), Positives = 152/352 (43%), Gaps = 62/352 (17%)
Query: 83 LFTWGANEFGQLG---DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
+ TWG++ +LG +G E+ + PE++ + SISCG++ +AA+ E
Sbjct: 590 IMTWGSSSNCKLGFKTEGREQSQATPERLPNFNIPEICSISCGSYYSAALTE-------- 641
Query: 140 STSRLWVWGQNQGSNFPRLFWG------AFTPNTI-----ICQVSCGSVHVVALSECGLL 188
+++WG+ N P G P + + VS G H AL G L
Sbjct: 642 -NGDVYMWGRGSVKNPPLSTLGNGSLEDQLLPTKVESLSEVVLVSIGYYHSAALKSNGEL 700
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG E GQLG G P+V++ +TQV CGE H+ +++NG+
Sbjct: 701 LTWGCGEDGQLGHGDVLNQTI-PKVVQTMTSHW--------VTQVQCGEKHTICLTKNGK 751
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
V+TWG GQLG L K P V +L+ I +ACG H LT+ + +G
Sbjct: 752 VFTWGTSEYGQLG---LGDTQKNCTPMLVTSLEKYNIIQIACGSTHCAVLTNAREVLVFG 808
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN----GVQLVACGHSHTLVYMRDG 364
G S ++I ++P++ VP ++ ++CGH T G
Sbjct: 809 N--------GAAMGSANII---------SVPMM-VPALKHLNIERLSCGHYSTAALTECG 850
Query: 365 RIHGWGY-NSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADA 414
++ WG G N+ +P VD + +R+++ GG H A L D+
Sbjct: 851 DVYTWGSGQELGHGTNQSEL---HPKLVDGLRSQSIRQISCGGRHMAFLTDS 899
Score = 106 bits (264), Expect = 3e-20, Method: Composition-based stats.
Identities = 80/288 (27%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL-DIACGHEHTA 75
+ + + WG GQ G G IPK + S W+ + CG +HT
Sbjct: 694 LKSNGELLTWGCGEDGQLGH-GDVLNQTIPKVVQT--------MTSHWVTQVQCGEKHTI 744
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE- 134
+ +G +FTWG +E+GQLG G + P V L+ + I+CG+ A + RE
Sbjct: 745 CLTKNGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSLEKYNIIQIACGSTHCAVLTNAREV 804
Query: 135 ----NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
N + ++ + + P + N I ++SCG AL+ECG +
Sbjct: 805 LVFGNGAAMGSANI--------ISVPMMVPALKHLN--IERLSCGHYSTAALTECGDVYT 854
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG + +LG G L P+++ G + I Q+SCG H A ++++G++Y
Sbjct: 855 WGSGQ--ELGHGTNQSELH-PKLVDGLRS--------QSIRQISCGGRHMAFLTDSGKIY 903
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
T G GQLGH GD+ P+++ +L V+CG H+ +L
Sbjct: 904 TCGKDPFGQLGHA---QGDQN-KPKKIDSLLKTTFISVSCGENHNASL 947
Score = 52.0 bits (123), Expect = 7e-04, Method: Composition-based stats.
Identities = 57/246 (23%), Positives = 90/246 (36%), Gaps = 49/246 (19%)
Query: 216 GYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPR 275
G L +P+L + + ++ G + TWG S +LG + + P
Sbjct: 558 GDNTLLSSSPQLTGVNSNDSSRSATQLDTQRG-IMTWGSSSNCKLGFKTEGREQSQATPE 616
Query: 276 RVVALDGIFIKDVACGGVHSCALTSKGALYAWG--------------GSQAGQLGLGPQT 321
R+ + I ++CG +S ALT G +Y WG GS QL L +
Sbjct: 617 RLPNFNIPEICSISCGSYYSAALTENGDVYMWGRGSVKNPPLSTLGNGSLEDQL-LPTKV 675
Query: 322 RSFSLIPNESDTYF-----------------------------RNIPILV---VPNGVQL 349
S S + S Y+ + IP +V + V
Sbjct: 676 ESLSEVVLVSIGYYHSAALKSNGELLTWGCGEDGQLGHGDVLNQTIPKVVQTMTSHWVTQ 735
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
V CG HT+ ++G++ WG + YGQ + P V + ++A G H
Sbjct: 736 VQCGEKHTICLTKNGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSLEKYNIIQIACGSTHC 795
Query: 409 AVLADA 414
AVL +A
Sbjct: 796 AVLTNA 801
>gi|156546048|ref|XP_001600404.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Nasonia
vitripennis]
Length = 533
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 134/260 (51%), Gaps = 37/260 (14%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTAAIAEPRE 134
V DG ++ G+N G LG G HP+KV+ L + +K+ + G+ H A
Sbjct: 39 VTKDGDVYALGSNTAGCLGTGDSHSTLHPKKVEALCGKGIKTFAYGSGPHVLA-----LT 93
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGA----FTPN-------TIICQVSCGSVHVVALS 183
N G I + WG N + L G+ TP ++ ++CGS H VAL+
Sbjct: 94 NKGEI-----YSWGHN---GYCELGNGSTNQGLTPTLCLNLNEKVVTAIACGSHHSVALT 145
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
E G + +WG N GQ+ GI+ +G + ++ A + + ++CG+ S AV
Sbjct: 146 EDGEVYSWGQNNCGQVSSGISSN--------QGAPRKVNSALTGKVVVSIACGQTSSMAV 197
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
++ GEV+ WG VGQLG + + +L P +V L+GI I+ VACG H+ AL+ +GA
Sbjct: 198 TDVGEVFGWGYNGVGQLG---IGNYVNQLSPCKVTGLNGIVIEKVACGYAHTLALSDEGA 254
Query: 304 LYAWGGSQAGQLGLGPQTRS 323
LY WGG+ GQLGLG + +
Sbjct: 255 LYVWGGNGFGQLGLGNKANA 274
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 108/203 (53%), Gaps = 29/203 (14%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HV+AL+ G + +WG+N Y +LG G T +GL + L+E + +T ++CG
Sbjct: 88 HVLALTNKGEIYSWGHNGYCELGNGSTNQGLTPTLCLN-----LNE----KVVTAIACGS 138
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGIFIKDVACGGVHSC 296
+HS A++E+GEVY+WG + GQ+ S + PR+V AL G + +ACG S
Sbjct: 139 HHSVALTEDGEVYSWGQNNCGQV---SSGISSNQGAPRKVNSALTGKVVVSIACGQTSSM 195
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV-PNGVQL--VACG 353
A+T G ++ WG + GQLG+G S P V NG+ + VACG
Sbjct: 196 AVTDVGEVFGWGYNGVGQLGIGNYVNQLS-------------PCKVTGLNGIVIEKVACG 242
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQ 376
++HTL +G ++ WG N +GQ
Sbjct: 243 YAHTLALSDEGALYVWGGNGFGQ 265
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 115/252 (45%), Gaps = 42/252 (16%)
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
H A+ + G +++WG N + +LG+G+ P L + V +I+CG+H + A+ E
Sbjct: 88 HVLALTNKGEIYSWGHNGYCELGNGSTNQGLTPTLCLNLNEKVVTAIACGSHHSVALTED 147
Query: 133 RENDGTISTSRLWVWGQ------------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVV 180
E ++ WGQ NQG+ PR A T ++ ++CG +
Sbjct: 148 GE---------VYSWGQNNCGQVSSGISSNQGA--PRKVNSALT-GKVVVSIACGQTSSM 195
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
A+++ G + WGYN GQLG G L P + G + I +V+CG H+
Sbjct: 196 AVTDVGEVFGWGYNGVGQLGIGNYVNQLS-PCKVTGLNGIV--------IEKVACGYAHT 246
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVH----SC 296
A+S+ G +Y WG GQLG L + P ++ + I D+A +H S
Sbjct: 247 LALSDEGALYVWGGNGFGQLG---LGNKANACTPIKLNVTEMGRISDIAT--LHYNHISV 301
Query: 297 ALTSKGALYAWG 308
A+ G +Y WG
Sbjct: 302 AMGQGGKIYMWG 313
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 106/245 (43%), Gaps = 37/245 (15%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K IY WG+N + G G Q L P L C IACG H+ A+
Sbjct: 95 KGEIYSWGHNGYCELGN-GSTNQ-----GLTPTL--CLNLNEKVVTAIACGSHHSVALTE 146
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG +++WG N GQ+ G + P KV L + V SI+CG + A+ + E G
Sbjct: 147 DGEVYSWGQNNCGQVSSGISSNQGAPRKVNSALTGKVVVSIACGQTSSMAVTDVGEVFG- 205
Query: 139 ISTSRLWVWGQN------QGSNFPRLFWGAFT--PNTIICQVSCGSVHVVALSECGLLQA 190
WG N G+ +L T +I +V+CG H +ALS+ G L
Sbjct: 206 --------WGYNGVGQLGIGNYVNQLSPCKVTGLNGIVIEKVACGYAHTLALSDEGALYV 257
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH--SAAVSENGE 248
WG N +GQLG G ++ E+ +I+ ++ Y+ S A+ + G+
Sbjct: 258 WGGNGFGQLGLGNKANACTPIKL---------NVTEMGRISDIATLHYNHISVAMGQGGK 308
Query: 249 VYTWG 253
+Y WG
Sbjct: 309 IYMWG 313
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 77/153 (50%), Gaps = 18/153 (11%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHSCALT 299
V+++G+VY G + G LG +GD L P++V AL G IK A G G H ALT
Sbjct: 39 VTKDGDVYALGSNTAGCLG-----TGDSHSTLHPKKVEALCGKGIKTFAYGSGPHVLALT 93
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
+KG +Y+WG + +LG G + + T N+ VV +ACG H++
Sbjct: 94 NKGEIYSWGHNGYCELGNGSTNQGLT------PTLCLNLNEKVV----TAIACGSHHSVA 143
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVD 392
DG ++ WG N+ GQ ++ S+ P V+
Sbjct: 144 LTEDGEVYSWGQNNCGQVSSGISSNQGAPRKVN 176
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 17/131 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLD-IACGHEHTAAVASDG 81
++ WGYN GQ G QL K G N ++ +ACG+ HT A++ +G
Sbjct: 203 VFGWGYNGVGQLGIGNYVNQLSPCK---------VTGLNGIVIEKVACGYAHTLALSDEG 253
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
L+ WG N FGQLG G + P K+ + + I+ + ++A +
Sbjct: 254 ALYVWGGNGFGQLGLGNKANACTPIKLNVTEMGRISDIATLHYNHISVAMGQ-------G 306
Query: 142 SRLWVWGQNQG 152
++++WGQ +G
Sbjct: 307 GKIYMWGQCRG 317
>gi|301117544|ref|XP_002906500.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262107849|gb|EEY65901.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 4048
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 149/318 (46%), Gaps = 37/318 (11%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ G N SGQ G E ++ I + +G + A G EH AVASDG
Sbjct: 518 VFTCGLNKSGQCGNGTFEERVIIATPV-----RALSGIAISMVAAANGCEHMLAVASDGA 572
Query: 83 LFTWGANEFGQLGDGTEEGRKH-PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F+WG N+ GQLG G+ + H P + L+ ++ H T A + S
Sbjct: 573 VFSWGYNDRGQLGLGSTISKSHTPRMIDSLREKY--------HITTAAVSYHHSAVVSSN 624
Query: 142 SRLWVWGQN----------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
L +G N Q + P++ + ++ + +CG H VA + G + ++
Sbjct: 625 GELLTFGMNDCGQLGLDHTQHQHTPQVVDA--LSSQVVTKAACGLYHTVAATSDGEVYSF 682
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G N+YGQLG G ++ P ++K D EKI VSCG YH+ +SE G++ T
Sbjct: 683 GKNDYGQLGLG-HARNIKTPALVKTSLGESD-----EKIVAVSCGYYHTVTISEKGKLIT 736
Query: 252 WGLGSVGQLGHCSLQSGDK-ELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
WG GQLG S + + + +P + + IK+ +CG HS L S G + +G +
Sbjct: 737 WGRNDYGQLGIGSKEHKNSAQFVPLPMSSK----IKNASCGCYHSLILMSNGRVMVFGRN 792
Query: 311 QAGQLGLGPQTRSFSLIP 328
GQLG G +T S + +P
Sbjct: 793 NKGQLGAGARTLSSADLP 810
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 159/357 (44%), Gaps = 52/357 (14%)
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
T A + LF+ G N +G+L G E V ++ ++ ++ G A +
Sbjct: 457 TVASFEECELFSCGQNNYGELCLGHCNSTSKLEHVPFFSAKGIRDVAGGNEVLAVVM--- 513
Query: 134 ENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSV-------HVVALSECG 186
NDG + T L GQ F A TP + ++ V H++A++ G
Sbjct: 514 -NDGGVFTCGLNKSGQCGNGTFEERVIIA-TPVRALSGIAISMVAAANGCEHMLAVASDG 571
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ +WGYN+ GQLG G T PR+I D E IT + +HSA VS N
Sbjct: 572 AVFSWGYNDRGQLGLGSTISKSHTPRMI-------DSLREKYHITTAAVSYHHSAVVSSN 624
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
GE+ T+G+ GQLG L + P+ V AL + ACG H+ A TS G +Y+
Sbjct: 625 GELLTFGMNDCGQLG---LDHTQHQHTPQVVDALSSQVVTKAACGLYHTVAATSDGEVYS 681
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI--PILVVPN------GVQLVACGHSHTL 358
+G + GQLGLG + RNI P LV + + V+CG+ HT+
Sbjct: 682 FGKNDYGQLGLG---------------HARNIKTPALVKTSLGESDEKIVAVSCGYYHTV 726
Query: 359 VYMRDGRIHGWGYNSYGQ----AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
G++ WG N YGQ + K++ + P P+ +++ + G HS +L
Sbjct: 727 TISEKGKLITWGRNDYGQLGIGSKEHKNSAQFVPLPMS---SKIKNASCGCYHSLIL 780
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 134/298 (44%), Gaps = 34/298 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPP--ELFGCPAGANSRWLDIACGHEHT 74
+ + A++ WGYN GQ G + P+ + E + A S + H+
Sbjct: 567 VASDGAVFSWGYNDRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVS--------YHHS 618
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
A V+S+G L T+G N+ GQLG + + P+ V L S+ V +CG + T A
Sbjct: 619 AVVSSNGELLTFGMNDCGQLGLDHTQHQHTPQVVDALSSQVVTKAACGLYHTVAAT---- 674
Query: 135 NDGTISTSRLWVWGQ-----NQGSNFPRLFWGAF-TPNTIICQVSCGSVHVVALSECGLL 188
+DG + + +GQ + P L + + I VSCG H V +SE G L
Sbjct: 675 SDGEVYSFGKNDYGQLGLGHARNIKTPALVKTSLGESDEKIVAVSCGYYHTVTISEKGKL 734
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG N+YGQLG G + K A+F+ P KI SCG YHS + NG
Sbjct: 735 ITWGRNDYGQLG--------IGSKEHKNSAQFV-PLPMSSKIKNASCGCYHSLILMSNGR 785
Query: 249 VYTWGLGSVGQL--GHCSLQSGDKEL-LPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
V +G + GQL G +L S D L +P +A D + +A G S LT + +
Sbjct: 786 VMVFGRNNKGQLGAGARTLSSADLPLPVPSNSLANDEVV--RIAAGFYSSYILTGRSS 841
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 102/236 (43%), Gaps = 22/236 (9%)
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
V + EC L + G N YG+L G C + ++ + I V+ G
Sbjct: 458 VASFEECELF-SCGQNNYGELCLG-HCNSTSKLEHVPFFSA--------KGIRDVAGGNE 507
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHSC 296
A V +G V+T GL GQ G+ + + ++ ++ V AL GI I VA G H
Sbjct: 508 VLAVVMNDGGVFTCGLNKSGQCGNGTFE--ERVIIATPVRALSGIAISMVAAANGCEHML 565
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ S GA+++WG + GQLGLG T S S P D+ I A + H
Sbjct: 566 AVASDGAVFSWGYNDRGQLGLG-STISKSHTPRMIDSLREKYHITT-------AAVSYHH 617
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
+ V +G + +G N GQ + + + P VD +V AA G + V A
Sbjct: 618 SAVVSSNGELLTFGMNDCGQLGLDHTQHQHTPQVVDALSSQVVTKAACGLYHTVAA 673
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 18/188 (9%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y +G N GQ G G R ++ P + L ++ + + ++CG+ HT ++ G
Sbjct: 679 VYSFGKNDYGQLGL-GHARNIKTPALVKTSL----GESDEKIVAVSCGYYHTVTISEKGK 733
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L TWG N++GQLG G++E + + V S +K+ SCG + + + +S
Sbjct: 734 LITWGRNDYGQLGIGSKEHKNSAQFVPLPMSSKIKNASCGCYHSLIL---------MSNG 784
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R+ V+G+N N +L GA T ++ + S + +A E + A Y+ Y GR
Sbjct: 785 RVMVFGRN---NKGQLGAGARTLSSADLPLPVPS-NSLANDEVVRIAAGFYSSYILTGRS 840
Query: 203 ITCEGLQG 210
L G
Sbjct: 841 SDNADLDG 848
>gi|284032915|ref|YP_003382846.1| regulator of chromosome condensation RCC1 [Kribbella flavida DSM
17836]
gi|283812208|gb|ADB34047.1| regulator of chromosome condensation RCC1 [Kribbella flavida DSM
17836]
Length = 666
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/330 (32%), Positives = 147/330 (44%), Gaps = 56/330 (16%)
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
++ G EH+ A+ SDGT++TWG NE GQLGDGT R P +V L V I+ G +
Sbjct: 63 EVEAGREHSIALRSDGTVWTWGFNEMGQLGDGTATNRPAPVQVGGLSG--VVDIAGGHYH 120
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----------AFTPNTIICQVSCG 175
+ A+ DGT+ WG N +F +L G A TP + + ++ G
Sbjct: 121 SLALLA----DGTVR-----AWGYN---SFGQLGNGATTSAQRTPVAVTPLSGVLAIAGG 168
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
A+ G + WG N GQLG G T + RV L IT +S
Sbjct: 169 RDMSYAVRSDGTVWGWGLNTTGQLGDGTTTMRTRPVRV-----------GSLAGITAISG 217
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
G H AV +G V+ WG + GQ+G SL L P +V + G +VA G HS
Sbjct: 218 GRDHGLAVRSDGTVWAWGDNTQGQVGDGSLT---NRLAPVQVPGVTGAV--EVAAGAYHS 272
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP--NGVQLVACG 353
A + G L +WG + GQLG G TR + VP +G +A G
Sbjct: 273 IARLTGGTLRSWGQNSNGQLGDGTTTRRTQSV--------------AVPGVSGATAIATG 318
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQAANEKST 383
H++ + G + WG N+ GQ + ST
Sbjct: 319 RQHSVAVVSGGALRAWGSNAAGQLGDGTST 348
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/312 (33%), Positives = 140/312 (44%), Gaps = 56/312 (17%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N GQ G G P Q+ G S +DIA GH H+ A+ +DGT
Sbjct: 80 VWTWGFNEMGQLG-DGTATNRPAPVQV---------GGLSGVVDIAGGHYHSLALLADGT 129
Query: 83 LFTWGANEFGQLGDG-TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+ WG N FGQLG+G T ++ P V L V +I+ G + A+ +DGT+
Sbjct: 130 VRAWGYNSFGQLGNGATTSAQRTPVAVTPLSG--VLAIAGGRDMSYAV----RSDGTV-- 181
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPNTI---------ICQVSCGSVHVVALSECGLLQAWG 192
W WG N +L G T T I +S G H +A+ G + AWG
Sbjct: 182 ---WGWGLN---TTGQLGDGTTTMRTRPVRVGSLAGITAISGGRDHGLAVRSDGTVWAWG 235
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
N GQ+G G L +V P + +V+ G YHS A G + +W
Sbjct: 236 DNTQGQVGDGSLTNRLAPVQV-----------PGVTGAVEVAAGAYHSIARLTGGTLRSW 284
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRV--VALDGIF-IKDVACGGVHSCALTSKGALYAWGG 309
G S GQLG + RR VA+ G+ +A G HS A+ S GAL AWG
Sbjct: 285 GQNSNGQLGDGTTT--------RRTQSVAVPGVSGATAIATGRQHSVAVVSGGALRAWGS 336
Query: 310 SQAGQLGLGPQT 321
+ AGQLG G T
Sbjct: 337 NAAGQLGDGTST 348
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 118/286 (41%), Gaps = 42/286 (14%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A + WGYN GQ G R P + P L G L IA G + + AV
Sbjct: 126 ADGTVRAWGYNSFGQLGNGATTSAQRTPVAVTP-LSGV--------LAIAGGRDMSYAVR 176
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
SDGT++ WG N GQLGDGT R P +V L + +IS G A+ +DGT
Sbjct: 177 SDGTVWGWGLNTTGQLGDGTTTMRTRPVRVGSLAG--ITAISGGRDHGLAV----RSDGT 230
Query: 139 ISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
+ W WG N GS RL T +V+ G+ H +A G L++WG
Sbjct: 231 V-----WAWGDNTQGQVGDGSLTNRLAPVQVPGVTGAVEVAAGAYHSIARLTGGTLRSWG 285
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
N GQLG G T Q V P + T ++ G HS AV G + W
Sbjct: 286 QNSNGQLGDGTTTRRTQSVAV-----------PGVSGATAIATGRQHSVAVVSGGALRAW 334
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
G + GQLG G P V +V+ G H+ AL
Sbjct: 335 GSNAAGQLGD-----GTSTDRPNAVTVAGIAGAAEVSAGRDHTLAL 375
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 147/337 (43%), Gaps = 57/337 (16%)
Query: 63 RWLDIACG-------HEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
RW +A G H+ AA G+ + WG N GQLG+GT GR V L +
Sbjct: 3 RWGLVAVGCLLATGLHQSEAAAVEPGSAWAWGGNGTGQLGNGTTTGRGTAAPVTSLTN-- 60
Query: 116 VKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT--PNTI----- 168
V + G + A+ +DGT+ W WG N+ +L G T P +
Sbjct: 61 VTEVEAGREHSIAL----RSDGTV-----WTWGFNE---MGQLGDGTATNRPAPVQVGGL 108
Query: 169 --ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPE 226
+ ++ G H +AL G ++AWGYN +GQLG G T + P +
Sbjct: 109 SGVVDIAGGHYHSLALLADGTVRAWGYNSFGQLGNGATTSAQRTPVAVT----------P 158
Query: 227 LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
L + ++ G S AV +G V+ WGL + GQLG + P RV +L G I
Sbjct: 159 LSGVLAIAGGRDMSYAVRSDGTVWGWGLNTTGQLGDGTTT---MRTRPVRVGSLAG--IT 213
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
++ G H A+ S G ++AWG + GQ+G G T + + +P + G
Sbjct: 214 AISGGRDHGLAVRSDGTVWAWGDNTQGQVGDGSLTNRLAPV---------QVPGV---TG 261
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKST 383
VA G H++ + G + WG NS GQ + +T
Sbjct: 262 AVEVAAGAYHSIARLTGGTLRSWGQNSNGQLGDGTTT 298
>gi|195399111|ref|XP_002058164.1| GJ15642 [Drosophila virilis]
gi|194150588|gb|EDW66272.1| GJ15642 [Drosophila virilis]
Length = 5062
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 164/352 (46%), Gaps = 55/352 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G +G+ G G + +P QLP + + + G +H A+ DG
Sbjct: 3099 VYACGEGTNGRLGL-GVTHNVPLPHQLP-----VLHQYVVKKVAVHSGGKHALALTLDGK 3152
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F+WG E G+LG G P V+ L+++ ++ I+CG+ +AAI+ S
Sbjct: 3153 VFSWGEGEDGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAIS---------SQG 3203
Query: 143 RLWVWGQNQ------GSNFPRLFWGAFTP--NTIICQVSCGS--VHVVALSECGLLQAWG 192
L+ WG + G N +L T + QV+CGS +AL+E G + +WG
Sbjct: 3204 ELYTWGLGEYGRLGHGDNATQLKPKLVTALHGRRVIQVACGSRDAQTLALTEDGAVFSWG 3263
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
++G+LGRG + EG P I+ + + Q+ CG S A++ GEV+TW
Sbjct: 3264 DGDFGKLGRGGS-EGSATPHEIERLSGI--------GVIQIECGAQFSLALTRAGEVWTW 3314
Query: 253 GLGSVGQLGHCSLQSGDKELL-PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
G G +LGH GD+ + P+ + L G + VA G +H A+T G +YAWG +
Sbjct: 3315 GKGDYYRLGH----GGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDND 3370
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVY 360
GQ G G +T+ P LV+ V VACG SH++ +
Sbjct: 3371 HGQQGSG-------------NTFVNKKPALVIGLDAVFVNRVACGSSHSMAW 3409
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 135/286 (47%), Gaps = 35/286 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P+L G + DIACG H+AA+ + G
Sbjct: 4307 VYAWGEGEDGKLGHGNRMSYDR------PKLLEHLNGMSVA--DIACGSAHSAAITASGH 4358
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ TWG +G+LG G E + P+ V+ L I+CG+ + +++
Sbjct: 4359 VLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDN------ 4412
Query: 143 RLWVWGQNQ-------GSNFPRLFWGAFTPNTI-ICQVSCGSVHVVALSECGLLQAWGYN 194
+W WG GS+ +L + + + + +V CGS VAL++ G + WG
Sbjct: 4413 -VWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKG 4471
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
++ +LG G + + ++ P+ + A + +KI ++ G H A S+ GEVYTWG
Sbjct: 4472 DFHRLGHG-SVDHVRRPKKVA--------ALQGKKIISIATGSLHCVACSDAGEVYTWGD 4522
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
GQLG ++ + + PR V AL G I V CG H+ AL++
Sbjct: 4523 NDEGQLGDGTVTAIQR---PRLVAALQGKHIVKVTCGSAHTLALST 4565
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 140/320 (43%), Gaps = 45/320 (14%)
Query: 51 PELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQ 110
P L G + + + G +H A+ +DG ++ WG E G+LG G P+ ++
Sbjct: 4275 PTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRMSYDRPKLLEH 4334
Query: 111 LQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFW 160
L V I+CG+ +AAI ++ + WG+ + P+L
Sbjct: 4335 LNGMSVADIACGSAHSAAIT---------ASGHVLTWGKGRYGRLGHGDSEDQLRPKLVE 4385
Query: 161 GAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF 220
I G + +++ + +WG +YG+LGRG + +G + P I+ A
Sbjct: 4386 ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS-DGCKLPYKIESLAGL 4444
Query: 221 LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL 280
+ +V CG S A++++G VYTWG G +LGH S+ D P++V AL
Sbjct: 4445 --------GVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSV---DHVRRPKKVAAL 4493
Query: 281 DGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI 340
G I +A G +H A + G +Y WG + GQLG G + T + +
Sbjct: 4494 QGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDG------------TVTAIQRPRL 4541
Query: 341 LVVPNGVQL--VACGHSHTL 358
+ G + V CG +HTL
Sbjct: 4542 VAALQGKHIVKVTCGSAHTL 4561
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 174/410 (42%), Gaps = 62/410 (15%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S IY WG+NH GQ G G E RI P C A + R + +A G + AV D
Sbjct: 4199 STIYGWGHNHRGQLG--GLEGS-RIKTPTP-----CEALSLLRPIQLAGGEQSLFAVTPD 4250
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDG 137
G LF G G+LG G + P + LQ FVK ++ G HC A DG
Sbjct: 4251 GKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALT-----TDG 4305
Query: 138 TISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
+ + WG+ + P+L + ++CGS H A++ G
Sbjct: 4306 EV-----YAWGEGEDGKLGHGNRMSYDRPKLL--EHLNGMSVADIACGSAHSAAITASGH 4358
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSE 245
+ WG YG+LG G + + L+ P++++ + + ++C G+ + +++
Sbjct: 4359 VLTWGKGRYGRLGHGDSEDQLR-PKLVEALLGY--------RAIDIACGSGDAQTLCITD 4409
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+ V++WG G G+LG D LP ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4410 DDNVWSWGDGDYGKLGR---GGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVY 4466
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRD 363
WG +LG G S + R + G ++ +A G H +
Sbjct: 4467 TWGKGDFHRLGHG------------SVDHVRRPKKVAALQGKKIISIATGSLHCVACSDA 4514
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
G ++ WG N GQ + T P V G+ + K+ G H+ L+
Sbjct: 4515 GEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4564
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 165/408 (40%), Gaps = 70/408 (17%)
Query: 23 IYVWGYNHSGQTG-RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+ VWG N Q G KG + ++ Q L R + IA G + V+ DG
Sbjct: 3047 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRL---------RPIHIAGGSKSLFVVSQDG 3097
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
++ G G+LG G P ++ L VK ++ G H A DG
Sbjct: 3098 KVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTL-----DG- 3151
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+++ WG+ + PRL I ++CGS H A+S G L
Sbjct: 3152 ----KVFSWGEGEDGKLGHGNRSTLDKPRLVEALRAKK--IRDIACGSSHSAAISSQGEL 3205
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAVSEN 246
WG EYG+LG G L+ V + + ++ QV+CG + + A++E+
Sbjct: 3206 YTWGLGEYGRLGHGDNATQLKPKLVTALHGR---------RVIQVACGSRDAQTLALTED 3256
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
G V++WG G G+LG + P + L GI + + CG S ALT G ++
Sbjct: 3257 GAVFSWGDGDFGKLGR---GGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWT 3313
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDG 364
WG +LG G D + R + G ++ VA G H L G
Sbjct: 3314 WGKGDYYRLGHG------------GDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAG 3361
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE----VRKLAAGGGHS 408
+++ WG N +GQ + + P+ V +G V ++A G HS
Sbjct: 3362 QVYAWGDNDHGQQGSGNTFVNKKPALV---IGLDAVFVNRVACGSSHS 3406
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 124/278 (44%), Gaps = 36/278 (12%)
Query: 51 PELFGCPAGANSRWLDIA--CGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
P+L AN ++ IA C H AV S+ ++WG + +LG G R+ P K+
Sbjct: 604 PQLLDFAEIANETFVSIAAHCEGRHFLAVDSNHNAYSWGVGDSRRLGHGDCHARELPTKI 663
Query: 109 KQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQ----------NQGSNFPRL 158
+ L V+S+ CG +AAI R N L+ WG+ + P +
Sbjct: 664 ESLVRR-VQSVYCGCSYSAAITL-RGN--------LYTWGRGTYGRLGHGNSDDQCMPAM 713
Query: 159 FWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYA 218
+ + G H + L+ GL+ AWG +YG+LG G +C P +I+
Sbjct: 714 VMALKDHQVLDVALGSGDAHTLCLTRGGLVYAWGDGDYGKLGNG-SCNSSLQPLLIEC-- 770
Query: 219 KFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKEL-LPRRV 277
L ++ +V G S A++ G++Y+WG S LGH ++ + +PR +
Sbjct: 771 --------LPRVQRVFAGSQFSLALTCEGQLYSWGKASC--LGHQLVERNVQGCSVPRLI 820
Query: 278 VALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
+L I VA G H AL+S G ++ WG + Q+
Sbjct: 821 TSLQHKRIVHVAVGVAHCLALSSNGEIFGWGRNDNQQI 858
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 108/239 (45%), Gaps = 42/239 (17%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHE--HT 74
I ++ +Y WG G+ G QL+ P+L G R + +ACG T
Sbjct: 3199 ISSQGELYTWGLGEYGRLGHGDNATQLK------PKLVTALHG--RRVIQVACGSRDAQT 3250
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
A+ DG +F+WG +FG+LG G EG P ++++L V I CGA + A+ E
Sbjct: 3251 LALTEDGAVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGE 3310
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALS 183
+W WG+ ++ RL G P I + V+ G++H +A++
Sbjct: 3311 ---------VWTWGKG---DYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVT 3358
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
+ G + AWG N++GQ G G T + VI A F + +V+CG HS A
Sbjct: 3359 DAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVF---------VNRVACGSSHSMA 3408
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 112/241 (46%), Gaps = 42/241 (17%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACG--HEHT 74
I A + WG G+ G E QLR P+L G R +DIACG T
Sbjct: 4353 ITASGHVLTWGKGRYGRLGHGDSEDQLR------PKLVEALLG--YRAIDIACGSGDAQT 4404
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
+ D +++WG ++G+LG G +G K P K++ L V + CG+ + A+ +
Sbjct: 4405 LCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTK--- 4461
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGAF----TPNTI-------ICQVSCGSVHVVALS 183
+ ++ WG+ +F RL G+ P + I ++ GS+H VA S
Sbjct: 4462 ------SGAVYTWGKG---DFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACS 4512
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ G + WG N+ GQLG G T +Q PR++ A + + I +V+CG H+ A+
Sbjct: 4513 DAGEVYTWGDNDEGQLGDG-TVTAIQRPRLVA--------ALQGKHIVKVTCGSAHTLAL 4563
Query: 244 S 244
S
Sbjct: 4564 S 4564
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 113/280 (40%), Gaps = 59/280 (21%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVS--CGSVHVVALSECGLLQAWGYNEYGQLG 200
+L+ W + P+L A N ++ C H +A+ +WG + +LG
Sbjct: 591 KLYNWPIAKPETEPQLLDFAEIANETFVSIAAHCEGRHFLAVDSNHNAYSWGVGDSRRLG 650
Query: 201 RGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQL 260
G C + P I+ + ++ V CG +SAA++ G +YTWG G+ G+L
Sbjct: 651 HG-DCHARELPTKIESLVR---------RVQSVYCGCSYSAAITLRGNLYTWGRGTYGRL 700
Query: 261 GHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLG 318
GH + D + +P V+AL + DVA G H+ LT G +YAWG G+LG G
Sbjct: 701 GH---GNSDDQCMPAMVMALKDHQVLDVALGSGDAHTLCLTRGGLVYAWGDGDYGKLGNG 757
Query: 319 --------------PQTR------SFSL-IPNESDTYF-------------RNIPILVVP 344
P+ + FSL + E Y RN+ VP
Sbjct: 758 SCNSSLQPLLIECLPRVQRVFAGSQFSLALTCEGQLYSWGKASCLGHQLVERNVQGCSVP 817
Query: 345 NGVQL--------VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+ VA G +H L +G I GWG N Q
Sbjct: 818 RLITSLQHKRIVHVAVGVAHCLALSSNGEIFGWGRNDNQQ 857
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 117/301 (38%), Gaps = 49/301 (16%)
Query: 130 AEPRENDGTISTSRLWVWG------QNQGSNF-PRLFWGAFT-----PNTIIC-----QV 172
A P + R++ G + QG N P L W + P + C QV
Sbjct: 517 ATPNTASTILEQQRVYALGWPALSKEQQGFNVEPALSWTSAATQQPPPALLTCKFQLKQV 576
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
+C VV L + G L W + P F + A E
Sbjct: 577 ACSEDMVVLLCQEGKLYNWP---------------IAKPETEPQLLDFAEIANETFVSIA 621
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
C H AV N Y+WG+G +LGH + + LP ++ +L ++ V CG
Sbjct: 622 AHCEGRHFLAVDSNHNAYSWGVGDSRRLGHGDCHARE---LPTKIESLVR-RVQSVYCGC 677
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVAC 352
+S A+T +G LY WG G+LG G N D + + + + V VA
Sbjct: 678 SYSAAITLRGNLYTWGRGTYGRLGHG----------NSDDQCMPAMVMALKDHQVLDVAL 727
Query: 353 --GHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAV 410
G +HTL R G ++ WG YG+ N + P ++ C+ V+++ AG S
Sbjct: 728 GSGDAHTLCLTRGGLVYAWGDGDYGKLGNGSCNSSLQPLLIE-CLPRVQRVFAGSQFSLA 786
Query: 411 L 411
L
Sbjct: 787 L 787
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 98/228 (42%), Gaps = 25/228 (10%)
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ WG N+ QLG GL+G +V F L I ++ G VS++G
Sbjct: 3047 VMVWGLNDKEQLG------GLKGSKV--KVPTFSQTISRLRPI-HIAGGSKSLFVVSQDG 3097
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHSCALTSKGALY 305
+VY G G+ G+LG L LP ++ L +K VA GG H+ ALT G ++
Sbjct: 3098 KVYACGEGTNGRLG---LGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVF 3154
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
+WG + G+LG G N S + + ++ +ACG SH+ G
Sbjct: 3155 SWGEGEDGKLGHG----------NRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGE 3204
Query: 366 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLA 412
++ WG YG+ + + P V G V ++A G + LA
Sbjct: 3205 LYTWGLGEYGRLGHGDNATQLKPKLVTALHGRRVIQVACGSRDAQTLA 3252
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 10/111 (9%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGAN-SRWLDIACGHEHTAAVASDG 81
++ WG + G G ++ +R P+ + AG R + +A G H AV G
Sbjct: 3311 VWTWGKGDYYRLGHGG-DQHVRKPQPI--------AGLRGRRVIHVAVGALHCLAVTDAG 3361
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
++ WG N+ GQ G G K P V L + FV ++CG+ + A P
Sbjct: 3362 QVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSMAWGLP 3412
>gi|195168456|ref|XP_002025047.1| GL26839 [Drosophila persimilis]
gi|194108492|gb|EDW30535.1| GL26839 [Drosophila persimilis]
Length = 3840
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 162/352 (46%), Gaps = 55/352 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G +G+ G G + +P QLP + + + G +H A+ DG
Sbjct: 1886 VYACGEGTNGRLGL-GVTHNVPLPHQLP-----VLHQYVVKKVAVHSGGKHALALTLDGK 1939
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F+WG E G+LG G P V+ L+S+ ++ ++CG+ +AAI+ S
Sbjct: 1940 VFSWGEGEDGKLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAIS---------SQG 1990
Query: 143 RLWVWGQNQ------GSNFPRL---FWGAFTPNTIICQVSCGS--VHVVALSECGLLQAW 191
L+ WG + G N +L A +I QV+CGS +AL+E G + +W
Sbjct: 1991 ELYTWGLGEYGRLGHGDNATQLKPKLVAALAGRRVI-QVACGSRDAQTLALTEDGSVFSW 2049
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G ++G+LGRG EG P I+ + + Q+ CG S A++ GEV+T
Sbjct: 2050 GDGDFGKLGRG-GSEGSDTPHEIERLSGI--------GVIQIECGAQFSLALTRAGEVWT 2100
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG G +LGH Q K P+ + L G + VA G +H A+T G +YAWG +
Sbjct: 2101 WGKGDYYRLGHGGDQHVRK---PQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDND 2157
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVY 360
GQ G G +T+ P LV+ V VACG SH++ +
Sbjct: 2158 HGQQGSG-------------NTFVNKKPALVIGLDAVFVNRVACGSSHSIAW 2196
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 135/286 (47%), Gaps = 35/286 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P+L G N DIACG H+AA+ + G
Sbjct: 3085 VYAWGEGEDGKLGHGNRMSYDR------PKLVEHLNGMNVA--DIACGSAHSAAITASGH 3136
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ TWG +G+LG G E + P+ V+ L I+CG+ + +++
Sbjct: 3137 VLTWGKGRYGRLGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLCITDDDN------ 3190
Query: 143 RLWVWGQNQ-------GSNFPRLFWGAFTPNTI-ICQVSCGSVHVVALSECGLLQAWGYN 194
+W WG GS+ +L + + + + +V CGS VAL++ G + W
Sbjct: 3191 -VWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWSKG 3249
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
++ +LG G + + ++ P+ + A + +KI ++ G H A S++GEVYTWG
Sbjct: 3250 DFHRLGHG-SVDHVRRPKKVA--------ALQGKKIISIATGSLHCVACSDSGEVYTWGD 3300
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
GQLG ++ + + PR V AL G I V CG H+ AL++
Sbjct: 3301 NDEGQLGDGTVTAIQR---PRLVAALQGKHIVKVTCGSAHTLALST 3343
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 173/410 (42%), Gaps = 62/410 (15%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S IY WG+NH GQ G G E RI P C A + R + +A G + AV D
Sbjct: 2977 STIYGWGHNHRGQLG--GLEGS-RIKTPTP-----CEALSLLRPVQLAGGEQSLFAVTPD 3028
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDG 137
G LF G G+LG G + P + LQ FVK ++ G HC A E
Sbjct: 3029 GKLFATGYGSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTE------ 3082
Query: 138 TISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
++ WG+ + P+L N + ++CGS H A++ G
Sbjct: 3083 ----GEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMN--VADIACGSAHSAAITASGH 3136
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSE 245
+ WG YG+LG G + + L+ P++++ + + ++C G+ + +++
Sbjct: 3137 VLTWGKGRYGRLGHGDSEDQLR-PQLVEALLGY--------RAIDIACGSGDAQTLCITD 3187
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+ V++WG G G+LG D LP ++ +L G+ + V CG S ALT GA+Y
Sbjct: 3188 DDNVWSWGDGDYGKLGRG---GSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVY 3244
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRD 363
W +LG G S + R + G ++ +A G H +
Sbjct: 3245 TWSKGDFHRLGHG------------SVDHVRRPKKVAALQGKKIISIATGSLHCVACSDS 3292
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
G ++ WG N GQ + T P V G+ + K+ G H+ L+
Sbjct: 3293 GEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 3342
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 166/405 (40%), Gaps = 64/405 (15%)
Query: 23 IYVWGYNHSGQTG-RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+ VWG N Q G KG + ++ Q L R + IA G + V +G
Sbjct: 1834 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRL---------RPIHIAGGSKSLFIVGQNG 1884
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
++ G G+LG G P ++ L VK ++ G H A DG
Sbjct: 1885 KVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTL-----DG- 1938
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+++ WG+ + PRL + I V+CGS H A+S G L
Sbjct: 1939 ----KVFSWGEGEDGKLGHGNRTTLDKPRLVETLRSKK--IRDVACGSSHSAAISSQGEL 1992
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAVSEN 246
WG EYG+LG G L+ P+++ A ++ QV+CG + + A++E+
Sbjct: 1993 YTWGLGEYGRLGHGDNATQLK-PKLVAALAG--------RRVIQVACGSRDAQTLALTED 2043
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
G V++WG G G+LG + D P + L GI + + CG S ALT G ++
Sbjct: 2044 GSVFSWGDGDFGKLGRGGSEGSDT---PHEIERLSGIGVIQIECGAQFSLALTRAGEVWT 2100
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDG 364
WG +LG G D + R + G ++ VA G H L G
Sbjct: 2101 WGKGDYYRLGHG------------GDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAG 2148
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHS 408
+++ WG N +GQ + + P+ V V ++A G HS
Sbjct: 2149 QVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHS 2193
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 116/424 (27%), Positives = 175/424 (41%), Gaps = 66/424 (15%)
Query: 5 EIIGETARP-VDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSR 63
+ +G+ +P + +I A + YN G G P+ P L+G A +
Sbjct: 1776 QFVGQRQKPDLQHILANAQFLACEYNGMGMAGG---------PESGPVSLYGDHGMAGAL 1826
Query: 64 WLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA 123
D+ C T+ WG N+ QLG K P + + I+ G+
Sbjct: 1827 DQDLPC------------TVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGS 1874
Query: 124 HCTAAIAEPRENDGTI------STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSC--G 175
+ + +G + + RL G N P ++ +V+ G
Sbjct: 1875 KSLFIVGQ----NGKVYACGEGTNGRL---GLGVTHNVPLPHQLPVLHQYVVKKVAVHSG 1927
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
H +AL+ G + +WG E G+LG G L PR++ E +KI V+C
Sbjct: 1928 GKHALALTLDGKVFSWGEGEDGKLGHG-NRTTLDKPRLV--------ETLRSKKIRDVAC 1978
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG- 292
G HSAA+S GE+YTWGLG G+LGH GD +L P+ V AL G + VACG
Sbjct: 1979 GSSHSAAISSQGELYTWGLGEYGRLGH-----GDNATQLKPKLVAALAGRRVIQVACGSR 2033
Query: 293 -VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVA 351
+ ALT G++++WG G+LG G S + P+E + I GV +
Sbjct: 2034 DAQTLALTEDGSVFSWGDGDFGKLGRGGSEGSDT--PHEIER-LSGI-------GVIQIE 2083
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAV 410
CG +L R G + WG Y + + + P P+ G V +A G H
Sbjct: 2084 CGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLA 2143
Query: 411 LADA 414
+ DA
Sbjct: 2144 VTDA 2147
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 110/239 (46%), Gaps = 42/239 (17%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHE--HT 74
I ++ +Y WG G+ G QL+ P+L AG R + +ACG T
Sbjct: 1986 ISSQGELYTWGLGEYGRLGHGDNATQLK------PKLVAALAG--RRVIQVACGSRDAQT 2037
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
A+ DG++F+WG +FG+LG G EG P ++++L V I CGA + A+ E
Sbjct: 2038 LALTEDGSVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGE 2097
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALS 183
+W WG+ ++ RL G P I + V+ G++H +A++
Sbjct: 2098 ---------VWTWGKG---DYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVT 2145
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
+ G + AWG N++GQ G G T + VI A F + +V+CG HS A
Sbjct: 2146 DAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVF---------VNRVACGSSHSIA 2195
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 34/70 (48%)
Query: 63 RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG 122
R + +A G H AV G ++ WG N+ GQ G G K P V L + FV ++CG
Sbjct: 2130 RVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACG 2189
Query: 123 AHCTAAIAEP 132
+ + A P
Sbjct: 2190 SSHSIAWGLP 2199
>gi|269793990|ref|YP_003313445.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Sanguibacter keddieii DSM 10542]
gi|269096175|gb|ACZ20611.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Sanguibacter keddieii DSM 10542]
Length = 900
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/371 (28%), Positives = 159/371 (42%), Gaps = 38/371 (10%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N SGQ G R L +P +P + G AG R + +A G EH+ A+A DG
Sbjct: 69 VHAWGANASGQLGDGTTGRSL-VP--VPVAVDGALAGV--RVVQVAAGPEHSLALADDGA 123
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
++ WG+ GQLG G+ EG P +V L V + A+ + +DGT+ T
Sbjct: 124 VYAWGSGTSGQLGHGSVEGSTVPVRVAGDLDGRRVVQVEAAGTDDASTSLAVVDDGTVYT 183
Query: 142 SRLWVWGQNQGSNF-----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
WG+N G P GA + + +V+ G V VAL+ G A
Sbjct: 184 -----WGRNLGGRAGHAVEDLVLTEPTALAGALEGHRAV-RVAAGHVTGVALTADGRAFA 237
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG G +G G+T GP + G ++ G +A + ++G Y
Sbjct: 238 WGSRVNGAVGDGLTSGVQLGPTPVVGGGAL-----SGARLVDAGSGLRRTAVIDDDGRAY 292
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGVHSCALTSKGALYAWG 308
WG G G LG + +L + ALD + I+ V G S L + G L AWG
Sbjct: 293 GWGAGDHGALGTGGTANAPTPVLA-DMEALDQLGIRPVQITSGQNFSVVLGADGRLAAWG 351
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHG 368
GQLG G S+ + +D + ++ V+ G HT+ RDG+++
Sbjct: 352 NGTGGQLGNGASATSWHAVAVGTDGVLDGVEVV-------HVSAGQRHTVALGRDGQVYA 404
Query: 369 WGYNSYGQAAN 379
WG G+ N
Sbjct: 405 WGQGLSGELGN 415
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 97/227 (42%), Gaps = 23/227 (10%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
+V+ G H + + G + AWG N GQLG G T R + +D A ++
Sbjct: 52 RVAAGWNHSLLVDYHGRVHAWGANASGQLGDGTTG------RSLVPVPVAVDGALAGVRV 105
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVA 289
QV+ G HS A++++G VY WG G+ GQLGH S++ +P RV LDG + V
Sbjct: 106 VQVAAGPEHSLALADDGAVYAWGSGTSGQLGHGSVEG---STVPVRVAGDLDGRRVVQVE 162
Query: 290 CGGVH----SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
G S A+ G +Y WG + G+ G + L+ E + +
Sbjct: 163 AAGTDDASTSLAVVDDGTVYTWGRNLGGRAGHAVE----DLVLTEPTALAGALE----GH 214
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANE-KSTYAWYPSPV 391
VA GH + DGR WG G + S P+PV
Sbjct: 215 RAVRVAAGHVTGVALTADGRAFAWGSRVNGAVGDGLTSGVQLGPTPV 261
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 75/203 (36%), Gaps = 32/203 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQL-PPELFGCPAGANSRWLDIACGHEHTA 75
+ A + WG +G G L QL P + G A + +R +D G TA
Sbjct: 229 LTADGRAFAWGSRVNGAVGDG-----LTSGVQLGPTPVVGGGALSGARLVDAGSGLRRTA 283
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHP-----EKVKQLQSEFVKSISCGAHCTAAIA 130
+ DG + WGA + G LG G P E + QL V+ I+ G + + +
Sbjct: 284 VIDDDGRAYGWGAGDHGALGTGGTANAPTPVLADMEALDQLGIRPVQ-ITSGQNFSVVLG 342
Query: 131 EPRENDGTISTSRLWVWGQNQGSNF----PRLFWGAFTPNTI-------ICQVSCGSVHV 179
+ RL WG G W A T + VS G H
Sbjct: 343 ---------ADGRLAAWGNGTGGQLGNGASATSWHAVAVGTDGVLDGVEVVHVSAGQRHT 393
Query: 180 VALSECGLLQAWGYNEYGQLGRG 202
VAL G + AWG G+LG G
Sbjct: 394 VALGRDGQVYAWGQGLSGELGNG 416
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSP--VDWCVGEVR--KLAA 403
Q VA G +H+L+ GR+H WG N+ GQ + + + P P VD + VR ++AA
Sbjct: 51 QRVAAGWNHSLLVDYHGRVHAWGANASGQLGDGTTGRSLVPVPVAVDGALAGVRVVQVAA 110
Query: 404 GGGHSAVLAD 413
G HS LAD
Sbjct: 111 GPEHSLALAD 120
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 125/352 (35%), Gaps = 111/352 (31%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEE-------------------GRKHPEK 107
++ G HT A+ DG ++ WG G+LG+GT GR E
Sbjct: 386 VSAGQRHTVALGRDGQVYAWGQGLSGELGNGTGRGSNVPVVVGAPVPVSLEVLGRASSEA 445
Query: 108 VKQLQSE---------FVKSISCGA--------------HCTA----AIAEPRENDGTIS 140
L E V + G+ H A AI + +DG+ +
Sbjct: 446 APLLGGEGTAWSTVTVAVDDVPVGSARVGGDGRWLLRVPHVLALGDRAITASQGSDGSAA 505
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFTPNTI-----------ICQVSCGSVHV---VALSECG 186
T+ + V G WGA + + QV+ +V+V VAL+ G
Sbjct: 506 TTEVGVVGH------ALTAWGAGADEGVLGELEDLRDRRVVQVAKNAVNVDFEVALTGDG 559
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK-ITQVSCGEYHSAAVSE 245
+ A G + +GQ+ P+L+ + QV+ GE + A++
Sbjct: 560 AVLARGTDTHGQVA----------------------VPPDLDAGVVQVAAGETFALALTG 597
Query: 246 NGEVYTWG---------LGSVGQLGHCSLQSGDKELLPRRVVAL------------DGI- 283
G V +WG LG + + LL V DG+
Sbjct: 598 EGTVVSWGDPSLAVPPALGGRRAVQVAAAARTAYALLDDGTVVAWGEDGDGQARVPDGVE 657
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYF 335
+ VA GG + A+T+ G + AWG +AGQL + + + ++ D +
Sbjct: 658 SVVQVAGGGRFAAAVTAGGLVRAWGAGEAGQLDVPTEVQGEAVAVEAGDDFV 709
>gi|149701724|ref|XP_001494887.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Equus
caballus]
Length = 988
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 121/242 (50%), Gaps = 21/242 (8%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQ-GPRVIKGYAKFLDEAPEL 227
+ VSCG H +A+ G + AWG GQLG G +G+ P+ IK
Sbjct: 48 VSLVSCGQEHSLAVCHRGRVFAWGAGSEGQLGTG-EVKGINFTPKKIKTLTGI------- 99
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH-CSLQSGDKELLPRRVVALDGIFIK 286
KI QVSCG+YHS A+SE G+V++WG S GQLG S D P+RV +L+GI +
Sbjct: 100 -KIIQVSCGDYHSLALSEGGQVFSWGKNSQGQLGLGKEFPSQDS---PQRVRSLEGIPLA 155
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
VA GG HS AL+ G + WG + AGQL L S RN+ G
Sbjct: 156 QVAAGGAHSFALSVSGTSFGWGNNSAGQLALSGNNVPVQSYKPRSIGALRNL-------G 208
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGG 406
V ++CG+ HT V ++G++ +G NS GQ + S P V+ G V ++ G
Sbjct: 209 VIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGHSPSAQDRGPQLVERIDGLVSQIDCGSY 268
Query: 407 HS 408
H+
Sbjct: 269 HT 270
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 128/279 (45%), Gaps = 50/279 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKH-PEKVKQLQSEFVKSISCGAHC 125
++CG EH+ AV G +F WGA GQLG G +G P+K+K L + +SCG +
Sbjct: 51 VSCGQEHSLAVCHRGRVFAWGAGSEGQLGTGEVKGINFTPKKIKTLTGIKIIQVSCGDYH 110
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQV 172
+ A++E +++ WG+N G FP +P + + QV
Sbjct: 111 SLALSE---------GGQVFSWGKNSQGQLGLGKEFP----SQDSPQRVRSLEGIPLAQV 157
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQL---GRGITCEGLQGPRVIKGYAKFLDEAPELEK 229
+ G H ALS G WG N GQL G + + + PR I
Sbjct: 158 AAGGAHSFALSVSGTSFGWGNNSAGQLALSGNNVPVQSYK-PRSIGALRNL--------G 208
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ +SCG H+A +++NG+V+T+G S GQLGH S + D+ P+ V +DG+ + +
Sbjct: 209 VIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGH-SPSAQDRG--PQLVERIDGL-VSQID 264
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIP 328
CG H+ A Y + Q G GP RS S P
Sbjct: 265 CGSYHTLA-------YVYTTGQVVSFGRGPSCRSSSTHP 296
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 129/301 (42%), Gaps = 58/301 (19%)
Query: 90 EFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWG- 148
+F + E K+PE ++ L++ V +SCG + A+ R++ WG
Sbjct: 22 DFMPPSNSPLEETKNPEPIRTLETLRVSLVSCGQEHSLAVCH---------RGRVFAWGA 72
Query: 149 ---------QNQGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWG 192
+ +G NF TP I I QVSCG H +ALSE G + +WG
Sbjct: 73 GSEGQLGTGEVKGINF--------TPKKIKTLTGIKIIQVSCGDYHSLALSEGGQVFSWG 124
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
N GQLG G P+ ++ L+ P + QV+ G HS A+S +G + W
Sbjct: 125 KNSQGQLGLGKEFPSQDSPQRVRS----LEGIP----LAQVAAGGAHSFALSVSGTSFGW 176
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G S GQL + PR + AL + + ++CG H+ LT G ++ +G +
Sbjct: 177 GNNSAGQLALSGNNVPVQSYKPRSIGALRNLGVIYISCGYEHTAVLTQNGKVFTFGDNSC 236
Query: 313 GQLGLGP--QTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGW 369
GQLG P Q R L+ + V + CG HTL Y+ G++ +
Sbjct: 237 GQLGHSPSAQDRGPQLVER-------------IDGLVSQIDCGSYHTLAYVYTTGQVVSF 283
Query: 370 G 370
G
Sbjct: 284 G 284
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 98/197 (49%), Gaps = 27/197 (13%)
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFI 285
E +++ VSCG+ HS AV G V+ WG GS GQLG ++ + P+++ L GI I
Sbjct: 44 ETLRVSLVSCGQEHSLAVCHRGRVFAWGAGSEGQLGTGEVKGIN--FTPKKIKTLTGIKI 101
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
V+CG HS AL+ G +++WG + GQLGLG + S +S R++
Sbjct: 102 IQVSCGDYHSLALSEGGQVFSWGKNSQGQLGLGKEFPS-----QDSPQRVRSL------E 150
Query: 346 GVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQAA---NEKSTYAWYPSPVDWCVGEVRK 400
G+ L VA G +H+ G GWG NS GQ A N ++ P +G +R
Sbjct: 151 GIPLAQVAAGGAHSFALSVSGTSFGWGNNSAGQLALSGNNVPVQSYKPR----SIGALRN 206
Query: 401 L-----AAGGGHSAVLA 412
L + G H+AVL
Sbjct: 207 LGVIYISCGYEHTAVLT 223
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 112/249 (44%), Gaps = 45/249 (18%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG GQ G G + + + L G + + ++CG H+ A++ G
Sbjct: 67 VFAWGAGSEGQLG-TGEVKGINFTPKKIKTLTGI------KIIQVSCGDYHSLALSEGGQ 119
Query: 83 LFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F+WG N GQLG G E + P++V+ L+ + ++ G + A++ + G
Sbjct: 120 VFSWGKNSQGQLGLGKEFPSQDSPQRVRSLEGIPLAQVAAGGAHSFALSVSGTSFG---- 175
Query: 142 SRLWVWGQN-------QGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
WG N G+N P ++ P +I + +SCG H L++ G
Sbjct: 176 -----WGNNSAGQLALSGNNVP---VQSYKPRSIGALRNLGVIYISCGYEHTAVLTQNGK 227
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSEN 246
+ +G N GQLG + + +GP++++ ++Q+ CG YH+ A V
Sbjct: 228 VFTFGDNSCGQLGHSPSAQD-RGPQLVERIDGL---------VSQIDCGSYHTLAYVYTT 277
Query: 247 GEVYTWGLG 255
G+V ++G G
Sbjct: 278 GQVVSFGRG 286
>gi|443690304|gb|ELT92472.1| hypothetical protein CAPTEDRAFT_172844 [Capitella teleta]
Length = 4817
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 137/261 (52%), Gaps = 41/261 (15%)
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
H A+ S+G +++WG +FG+LG G P + +L + V +++CG+H +AAI
Sbjct: 489 HCLALTSEGDVYSWGNGDFGKLGHGDTVTCDSPMLINELHGKSVVNVACGSHHSAAIT-- 546
Query: 133 RENDGTISTSRLWVWGQNQGSNFPRLFWGA----FTPNTI-------ICQVSCGS--VHV 179
++ L+ WG+ +F RL G+ TP + + V+CGS
Sbjct: 547 -------ASGELFTWGRG---SFGRLGLGSTEDILTPALVSGLLGVTVVDVACGSGDAQT 596
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
+AL++ G + +WG EYG+LGRG EG + P K +D+ L+ +T+V CG +
Sbjct: 597 IALADTGSVYSWGDGEYGKLGRG-GSEGCKAP-------KLVDKLQGLD-VTRVYCGPQY 647
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHSCA 297
SAAV +NG V+TWG G +LGH G +E PR+V L G + ++ G H A
Sbjct: 648 SAAVCKNGAVFTWGNGEGYKLGH-----GTEEHVRFPRQVETLAGKHVTSLSLGSHHCLA 702
Query: 298 LTSKGALYAWGGSQAGQLGLG 318
T +G L +WG + GQLG G
Sbjct: 703 TTEEGELLSWGRNDKGQLGEG 723
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 177/419 (42%), Gaps = 85/419 (20%)
Query: 20 KSAIYVWGYNHSGQTG-RKGRERQLRIPKQLPPELFGCPAGANSRWLDIAC-----GHEH 73
++ ++VWG N Q G KG +++ P G N + C G +
Sbjct: 2913 QTQVFVWGLNDKDQLGGPKGS--KIKTP------------GINETLSTLKCVQIVGGSKS 2958
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAI 129
V DG LF G G+LG G G P ++ L +K ++ G H A
Sbjct: 2959 LFCVTQDGKLFACGEATNGRLGLGISAGNVPQPRQLTSLSQYVIKKVAVHSGGRHAMALT 3018
Query: 130 AEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHV 179
DG +++ WG+ PRL + + ++CG H
Sbjct: 3019 V-----DG-----KVFSWGEGDDGKLGHFSRMNCDKPRLIEALRSKR--VRDIACGGSHS 3066
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--E 237
A+ G L WG EYG+LG G L+ P+++K A E +++ QV+ G +
Sbjct: 3067 AAIISNGDLYTWGLGEYGRLGHGDNTTQLR-PKLVK--------ALEGQRVIQVALGSRD 3117
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGH-----CSLQSGDKELLPRRVVALDGIFIKDVACGG 292
+ A++++G VY+WG G G+LG CS+ P + L+G+ + + CG
Sbjct: 3118 AQTLALTDSGTVYSWGDGDFGKLGRGGSEGCSV--------PHPIERLNGVGVCQIECGA 3169
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--V 350
S ALT G ++ WG +LG G +D + R ++ G ++ V
Sbjct: 3170 QFSLALTKSGQVWTWGKGDYFRLGHG------------TDAHVRKPQLVETLKGKKVTHV 3217
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
A G H L + +G+++ WG N +GQ N +T P+ V G ++ ++A G HS
Sbjct: 3218 AVGALHCLSVLDNGQVYAWGDNDHGQQGNSTTTVNRKPALVQGLEGCKISRVACGSSHS 3276
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 139/286 (48%), Gaps = 41/286 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A + R DIACG H+AA+ S+G
Sbjct: 3023 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALRSKRVRDIACGGSHSAAIISNGD 3074
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L+ + V ++ G+ +A + GT+
Sbjct: 3075 LYTWGLGEYGRLGHGDNTTQLRPKLVKALEGQRVIQVALGSRDAQTLA--LTDSGTV--- 3129
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+ WG +F +L G P+ I +CQ+ CG+ +AL++ G + W
Sbjct: 3130 --YSWGDG---DFGKLGRGGSEGCSVPHPIERLNGVGVCQIECGAQFSLALTKSGQVWTW 3184
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G T ++ P+++ E + +K+T V+ G H +V +NG+VY
Sbjct: 3185 GKGDYFRLGHG-TDAHVRKPQLV--------ETLKGKKVTHVAVGALHCLSVLDNGQVYA 3235
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
WG GQ G+ + K P V L+G I VACG HS A
Sbjct: 3236 WGDNDHGQQGNSTTTVNRK---PALVQGLEGCKISRVACGSSHSIA 3278
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 151/345 (43%), Gaps = 56/345 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A+ +Y WG G+ G R R P G +DIA G H+A
Sbjct: 4038 LSAEGEVYSWGEGEDGKLGHGNRSPCDR------PRAIESLRGKEV--VDIAAGGAHSAC 4089
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ S G L++WG +G+LG G E + P+ V L+ V ++CG+ + ++
Sbjct: 4090 ITSTGELYSWGKGRYGRLGHGDSEDQTKPKLVDALKGYRVTDVACGSGDAQTLCITDDDS 4149
Query: 137 GTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
+W WG R G P I + +V CGS VAL++ G +
Sbjct: 4150 -------VWSWGDGDYGKLGRGGSDGCKVPMKIDALQGLGVIKVECGSQFSVALTKSGAV 4202
Query: 189 QAWGYNEYGQLGRGITCEGLQGPR---VIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
WG +Y +LG G T + ++ PR ++G +KI ++CG H A ++
Sbjct: 4203 YTWGKGDYHRLGHG-TEDHIRRPRRCTTLQG-----------KKIVSIACGSLHCVACTD 4250
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
GEVYTWG GQLG + + + PR V AL G I VACG HS
Sbjct: 4251 AGEVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKINRVACGSAHS---------L 4298
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
AW ++ G P + IP E ++ +++PI V+ N + L+
Sbjct: 4299 AWSTNKPVNAGKLP-----AQIPMEYNS-LQSLPINVLRNRLVLL 4337
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 143/307 (46%), Gaps = 47/307 (15%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ G H A+ DG +F+WG + G+LG + P ++ L+S+ V+ I+CG +
Sbjct: 3007 VHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALRSKRVRDIACGGSHS 3066
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQ------GSNFPRL---FWGAFTPNTIICQVSCGS- 176
AAI IS L+ WG + G N +L A +I QV+ GS
Sbjct: 3067 AAI---------ISNGDLYTWGLGEYGRLGHGDNTTQLRPKLVKALEGQRVI-QVALGSR 3116
Query: 177 -VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
+AL++ G + +WG ++G+LGRG EG P I+ + Q+ C
Sbjct: 3117 DAQTLALTDSGTVYSWGDGDFGKLGRG-GSEGCSVPHPIERLNGV--------GVCQIEC 3167
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
G S A++++G+V+TWG G +LGH + K P+ V L G + VA G +H
Sbjct: 3168 GAQFSLALTKSGQVWTWGKGDYFRLGHGTDAHVRK---PQLVETLKGKKVTHVAVGALHC 3224
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACG 353
++ G +YAWG + GQ G N + T R ++ G ++ VACG
Sbjct: 3225 LSVLDNGQVYAWGDNDHGQQG------------NSTTTVNRKPALVQGLEGCKISRVACG 3272
Query: 354 HSHTLVY 360
SH++ +
Sbjct: 3273 SSHSIAW 3279
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 141/322 (43%), Gaps = 69/322 (21%)
Query: 63 RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG 122
R + I G +H A++++G +++WG E G+LG G P ++ L+ + V I+ G
Sbjct: 4024 RKVAINSGGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCDRPRAIESLRGKEVVDIAAG 4083
Query: 123 AHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQ 171
+A I ST L+ WG+ + + RL G P + +
Sbjct: 4084 GAHSACIT---------STGELYSWGKGR---YGRLGHGDSEDQTKPKLVDALKGYRVTD 4131
Query: 172 VSCGS--VHVVALSECGLLQAWGYNEYGQLGRG--------ITCEGLQGPRVIKGYAKFL 221
V+CGS + +++ + +WG +YG+LGRG + + LQG VIK
Sbjct: 4132 VACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKVPMKIDALQGLGVIK------ 4185
Query: 222 DEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD 281
V CG S A++++G VYTWG G +LGH + D PRR L
Sbjct: 4186 -----------VECGSQFSVALTKSGAVYTWGKGDYHRLGH---GTEDHIRRPRRCTTLQ 4231
Query: 282 GIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL 341
G I +ACG +H A T G +Y WG + GQLG G T P L
Sbjct: 4232 GKKIVSIACGSLHCVACTDAGEVYTWGDNDEGQLGDG-------------TTNAIQRPRL 4278
Query: 342 VVP---NGVQLVACGHSHTLVY 360
V + VACG +H+L +
Sbjct: 4279 VAALQGKKINRVACGSAHSLAW 4300
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 147/337 (43%), Gaps = 53/337 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACG--HEHT 74
I + +Y WG G+ G E Q + P+L G R D+ACG T
Sbjct: 4090 ITSTGELYSWGKGRYGRLGHGDSEDQTK------PKLVDALKGY--RVTDVACGSGDAQT 4141
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
+ D ++++WG ++G+LG G +G K P K+ LQ V + CG+ + A+ +
Sbjct: 4142 LCITDDDSVWSWGDGDYGKLGRGGSDGCKVPMKIDALQGLGVIKVECGSQFSVALTK--- 4198
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-------------ICQVSCGSVHVVA 181
+ ++ WG+ ++ RL G T + I I ++CGS+H VA
Sbjct: 4199 ------SGAVYTWGKG---DYHRL--GHGTEDHIRRPRRCTTLQGKKIVSIACGSLHCVA 4247
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
++ G + WG N+ GQLG G T +Q PR++ A + +KI +V+CG HS
Sbjct: 4248 CTDAGEVYTWGDNDEGQLGDG-TTNAIQRPRLVA--------ALQGKKINRVACGSAHSL 4298
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A S N V L + + + SLQS +L R+V L I D+ C + L
Sbjct: 4299 AWSTNKPVNAGKLPAQIPMEYNSLQSLPINVLRNRLVLLH--HISDLFCPCIPMFDLEQS 4356
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
A+ A P L+ + +T FR +
Sbjct: 4357 EAV-----DMATSAVSSPDALRGVLVSSAKETAFRKV 4388
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 114/239 (47%), Gaps = 37/239 (15%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRG--ITCEGLQGPRVIKGYAKFLDEAPEL--EKITQV 233
H +AL+ G + +WG ++G+LG G +TC+ P +I EL + + V
Sbjct: 489 HCLALTSEGDVYSWGNGDFGKLGHGDTVTCDS---PMLIN----------ELHGKSVVNV 535
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG- 292
+CG +HSAA++ +GE++TWG GS G+LG L S + L P V L G+ + DVACG
Sbjct: 536 ACGSHHSAAITASGELFTWGRGSFGRLG---LGSTEDILTPALVSGLLGVTVVDVACGSG 592
Query: 293 -VHSCALTSKGALYAWGGSQAGQLGLGPQT--RSFSLIPNESDTYFRNIPILVVPNGVQL 349
+ AL G++Y+WG + G+LG G ++ L+ V
Sbjct: 593 DAQTIALADTGSVYSWGDGEYGKLGRGGSEGCKAPKLVDKLQGL------------DVTR 640
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGH 407
V CG ++ ++G + WG + + + +P V+ G+ V L+ G H
Sbjct: 641 VYCGPQYSAAVCKNGAVFTWGNGEGYKLGHGTEEHVRFPRQVETLAGKHVTSLSLGSHH 699
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 24/210 (11%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ V+CGS H A++ G L WG +G+LG G T E + P ++ G
Sbjct: 532 VVNVACGSHHSAAITASGELFTWGRGSFGRLGLGST-EDILTPALVSGLLGV-------- 582
Query: 229 KITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
+ V+CG + + A+++ G VY+WG G G+LG + P+ V L G+ +
Sbjct: 583 TVVDVACGSGDAQTIALADTGSVYSWGDGEYGKLGRGGSEGCKA---PKLVDKLQGLDVT 639
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
V CG +S A+ GA++ WG + +LG G T P + +T +
Sbjct: 640 RVYCGPQYSAAVCKNGAVFTWGNGEGYKLGHG--TEEHVRFPRQVET--------LAGKH 689
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
V ++ G H L +G + WG N GQ
Sbjct: 690 VTSLSLGSHHCLATTEEGELLSWGRNDKGQ 719
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 111/280 (39%), Gaps = 67/280 (23%)
Query: 186 GLLQAWGYNEYGQLG--------RGITCEGLQGPRVIK--------------------GY 217
G + WG+N GQLG ++CE L R ++ GY
Sbjct: 3936 GQIWGWGHNHRGQLGGVEGAKVKLPVSCETLATMRPVQLIGGEQTLFSITGDGKVCATGY 3995
Query: 218 AKFLDE---------APELEKITQ--------VSCGEYHSAAVSENGEVYTWGLGSVGQL 260
P L + Q ++ G H A+S GEVY+WG G G+L
Sbjct: 3996 GAGGRLGIGGTDSVATPTLIESIQHVFIRKVAINSGGKHCLALSAEGEVYSWGEGEDGKL 4055
Query: 261 GHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQ 320
GH + D+ PR + +L G + D+A GG HS +TS G LY+WG + G+LG G
Sbjct: 4056 GHGNRSPCDR---PRAIESLRGKEVVDIAAGGAHSACITSTGELYSWGKGRYGRLGHG-- 4110
Query: 321 TRSFSLIPNESDTYFRNIPILV-VPNGVQL--VAC--GHSHTLVYMRDGRIHGWGYNSYG 375
D+ + P LV G ++ VAC G + TL D + WG YG
Sbjct: 4111 -----------DSEDQTKPKLVDALKGYRVTDVACGSGDAQTLCITDDDSVWSWGDGDYG 4159
Query: 376 QAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADA 414
+ S P +D G V K+ G S L +
Sbjct: 4160 KLGRGGSDGCKVPMKIDALQGLGVIKVECGSQFSVALTKS 4199
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 82/179 (45%), Gaps = 22/179 (12%)
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
H A++ G+VY+WG G G+LGH + D +L + L G + +VACG HS A+
Sbjct: 489 HCLALTSEGDVYSWGNGDFGKLGHGDTVTCDSPML---INELHGKSVVNVACGSHHSAAI 545
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV---VPNGVQLVACG-- 353
T+ G L+ WG G+LGLG + P LV + V VACG
Sbjct: 546 TASGELFTWGRGSFGRLGLGSTEDILT-------------PALVSGLLGVTVVDVACGSG 592
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
+ T+ G ++ WG YG+ S P VD G +V ++ G +SA +
Sbjct: 593 DAQTIALADTGSVYSWGDGEYGKLGRGGSEGCKAPKLVDKLQGLDVTRVYCGPQYSAAV 651
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 64/129 (49%), Gaps = 17/129 (13%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++Y WG G+ GR G E + PK L +L G + CG +++AAV +G
Sbjct: 604 SVYSWGDGEYGKLGRGGSE-GCKAPK-LVDKLQGLDVTR------VYCGPQYSAAVCKNG 655
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+FTWG E +LG GTEE + P +V+ L + V S+S G+H A E E
Sbjct: 656 AVFTWGNGEGYKLGHGTEEHVRFPRQVETLAGKHVTSLSLGSHHCLATTEEGE------- 708
Query: 142 SRLWVWGQN 150
L WG+N
Sbjct: 709 --LLSWGRN 715
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 76/195 (38%), Gaps = 32/195 (16%)
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFI 285
+L+ I QV+C + G VY + Q H + L I I
Sbjct: 432 DLDDIIQVACSSNSLLILLRTGRVYKMTNSAEPQSMH-------------EISTLADIEI 478
Query: 286 KDVACG--GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
+A G H ALTS+G +Y+WG G+LG G DT + P+L+
Sbjct: 479 IKLAAHSEGSHCLALTSEGDVYSWGNGDFGKLGHG-------------DTVTCDSPMLIN 525
Query: 344 P---NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVR 399
V VACG H+ G + WG S+G+ + P+ V +G V
Sbjct: 526 ELHGKSVVNVACGSHHSAAITASGELFTWGRGSFGRLGLGSTEDILTPALVSGLLGVTVV 585
Query: 400 KLAAGGGHSAVLADA 414
+A G G + +A A
Sbjct: 586 DVACGSGDAQTIALA 600
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 10/123 (8%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A++ WG N G G E +R P+Q+ A ++ G H A +G
Sbjct: 656 AVFTWG-NGEGYKLGHGTEEHVRFPRQVE-------TLAGKHVTSLSLGSHHCLATTEEG 707
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
L +WG N+ GQLG+G + P L + + I+C + T A + P + GT+
Sbjct: 708 ELLSWGRNDKGQLGEGHTGLKAEPAFAASLLGKCIIGITCSSAQTFAWSRP--SRGTMIP 765
Query: 142 SRL 144
R+
Sbjct: 766 MRI 768
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 70/187 (37%), Gaps = 26/187 (13%)
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
+V CG S +V+ WGL QLG G K P L + + G
Sbjct: 2902 KVKCG---SGVKDIQTQVFVWGLNDKDQLGG---PKGSKIKTPGINETLSTLKCVQIVGG 2955
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLG------PQTRSFSLIPNESDTYFRNIPILVVPN 345
+T G L+A G + G+LGLG PQ R + + S + +
Sbjct: 2956 SKSLFCVTQDGKLFACGEATNGRLGLGISAGNVPQPRQLTSL---SQYVIKKVA------ 3006
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAG 404
V G H + DG++ WG G+ + P ++ + VR +A G
Sbjct: 3007 ----VHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALRSKRVRDIACG 3062
Query: 405 GGHSAVL 411
G HSA +
Sbjct: 3063 GSHSAAI 3069
>gi|380019055|ref|XP_003693433.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Apis florea]
Length = 4812
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 177/418 (42%), Gaps = 94/418 (22%)
Query: 5 EIIGE---TARPVDNIPAKSAIYVWGYNHSGQTG-RKGRERQL----RIPKQLPP----- 51
EII E + R + P SA+YVWG N Q G KG + +L + +L P
Sbjct: 2915 EIIQEQMNSQRGSEPQPQHSAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPVHIAG 2974
Query: 52 ------------ELFGCPAGANSRW------------------------LDIACGHEHTA 75
+L+ C G N R + + G +H
Sbjct: 2975 GSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVSVHSGGKHAL 3034
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
A+ DG +F+WG E G+LG G P ++ L+S+ ++ I+CG+ +AAI
Sbjct: 3035 ALTQDGKVFSWGEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAIT----- 3089
Query: 136 DGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGS--VHVVALS 183
S+ L+ WG + P+L I Q++CGS +AL+
Sbjct: 3090 ----SSGELYTWGLGEYGRLGHGDTATQSKPKLVQSLVGQR--IIQIACGSRDAQTMALT 3143
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
GL+ +WG ++G+LGRG +G P +I + Q+ CG S A+
Sbjct: 3144 ADGLVYSWGDGDFGKLGRG-GSDGCYTPLLIDRLNGL--------GVVQIECGAQFSLAL 3194
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
++ GEV+TWG G +LGH + K P V L G + VA G +H A+T G
Sbjct: 3195 TKYGEVWTWGKGDYFRLGHGNDHHVRK---PTLVEGLRGKKVIHVAVGALHCLAVTDIGQ 3251
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
+YAWG + GQ G G + I N+ + + V V+CG SH++ ++
Sbjct: 3252 VYAWGDNDHGQQGNG------TTIVNKKPSLVHELD----DARVNRVSCGSSHSIAWV 3299
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 160/360 (44%), Gaps = 59/360 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y GY G+ G G + + P L + + + G +H A
Sbjct: 4001 VTADGKVYATGYGAVGRLGIGGTD------SVMVPTLLESIQHVFVKKVAVNSGGKHCLA 4054
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
++S+G +++WG + G+LG G P+ +++L + I+CG H +AAI
Sbjct: 4055 LSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAIT------ 4108
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGS--VHVVALS 183
S L+ WG+ + + RL G TP I + V+CGS + ++
Sbjct: 4109 ---SAGWLYTWGKGR---YGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVT 4162
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ + +WG +YG+LGRG +G + P I+ A + +V CG S A+
Sbjct: 4163 DDDNVWSWGDGDYGKLGRG-GSDGCKIPMKIESLAGL--------GVVKVECGSQFSVAL 4213
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+ +G +YTWG G +LGH + D PR+V AL G I +A G +H A T KG
Sbjct: 4214 TRSGAIYTWGKGDYHRLGH---GTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGE 4270
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 360
++ WG + GQLG G T P LV + VACG +HTL +
Sbjct: 4271 VFTWGDNDEGQLGDG-------------TTSALQRPRLVHALQGKKITRVACGSAHTLAW 4317
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 176/406 (43%), Gaps = 64/406 (15%)
Query: 22 AIYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
AIY WG+NH GQ G G E ++++P C + + R + + G + AV +D
Sbjct: 3954 AIYGWGHNHRGQLG--GLEGAKVKLP-------VLCESLSALRPVQLTGGEQTLFAVTAD 4004
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDG 137
G ++ G G+LG G + P ++ +Q FVK ++ G HC A +E
Sbjct: 4005 GKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSE------ 4058
Query: 138 TISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
++ WG+ P+L T I ++CG H A++ G
Sbjct: 4059 ----GHVYSWGEGDDGKLGHGNRLSYDRPKLIEELL--GTEIVDIACGGHHSAAITSAGW 4112
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSE 245
L WG YG+LG G + + L P++I+ + K+ V+C G+ + V++
Sbjct: 4113 LYTWGKGRYGRLGHGDSEDQLT-PKLIEALQDY--------KVIDVACGSGDAQTLCVTD 4163
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+ V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4164 DDNVWSWGDGDYGKLGR---GGSDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGAIY 4220
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRD 363
WG +LG G +D + R + G ++ +A G H +
Sbjct: 4221 TWGKGDYHRLGHG------------TDDHVRRPRKVAALQGKKIISIATGSLHCVACTDK 4268
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
G + WG N GQ + ++ P V G ++ ++A G H+
Sbjct: 4269 GEVFTWGDNDEGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHT 4314
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 152/336 (45%), Gaps = 51/336 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R PK L EL G + +DIACG H+AA+ S G
Sbjct: 4061 VYSWGEGDDGKLGHGNRLSYDR-PK-LIEELLG------TEIVDIACGGHHSAAITSAGW 4112
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG G E + P+ ++ LQ V ++CG+ + +++
Sbjct: 4113 LYTWGKGRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDN------ 4166
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
+W WG R G P I + +V CGS VAL+ G + WG
Sbjct: 4167 -VWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGAIYTWGKG 4225
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G T + ++ PR + A + +KI ++ G H A ++ GEV+TWG
Sbjct: 4226 DYHRLGHG-TDDHVRRPRKVA--------ALQGKKIISIATGSLHCVACTDKGEVFTWGD 4276
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G I VACG H+ AW +A Q
Sbjct: 4277 NDEGQLGDGTTSALQR---PRLVHALQGKKITRVACGSAHT---------LAWSTMKATQ 4324
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
+ T P E D +++P V+ N + L+
Sbjct: 4325 SKMPATT------PMEYD-LVKDLPFPVLHNRLVLL 4353
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 131/274 (47%), Gaps = 39/274 (14%)
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
H A+ D ++++WG + G+LG G P+ ++ L + + I+CG+ +AA++
Sbjct: 516 HYLALTQDNSVYSWGNGDGGRLGHGDRAWYDEPKLIEALVEKNITFIACGSTYSAALS-- 573
Query: 133 RENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGS--VHV 179
S L+ WG+ N+ RL G P + + V+CGS
Sbjct: 574 -------SNGELYTWGR---GNYGRLGHGNSDNVMIPTLVTALNGHMVVYVACGSGDSQT 623
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
+ ++ G++ +WG YG+LGRG C+G + P+++ K LD + +V CG
Sbjct: 624 LCVTASGIVFSWGDGNYGKLGRG-GCDGSKTPKIVD---KLLD-----INVAKVYCGGQF 674
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT 299
SAA++ GEVYTWG G +LGH + D P+ + L +K++ G +H ALT
Sbjct: 675 SAALTAYGEVYTWGKGEAYRLGH---GNEDHVRYPKIIDILKTKKVKELCVGNLHVLALT 731
Query: 300 SKGALYAWGGSQAGQL--GLGPQTRSFSLIPNES 331
+Y WG + GQ+ LG +L P S
Sbjct: 732 EDQLIYGWGRNDYGQIDPALGTVVPEPTLCPTLS 765
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 125/288 (43%), Gaps = 47/288 (16%)
Query: 103 KHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNF------- 155
++P++V + + I+ + T +A ++N ++ WG G
Sbjct: 492 QYPQRVYGFSEKPIIMIASHSDGTHYLALTQDNS-------VYSWGNGDGGRLGHGDRAW 544
Query: 156 ---PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPR 212
P+L N I ++CGS + ALS G L WG YG+LG G + + P
Sbjct: 545 YDEPKLIEALVEKN--ITFIACGSTYSAALSSNGELYTWGRGNYGRLGHG-NSDNVMIPT 601
Query: 213 VIKGYAKFLDEAPELEKITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGH--CSLQSG 268
++ + + V+CG + + V+ +G V++WG G+ G+LG C
Sbjct: 602 LVTALNGHM--------VVYVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGC----- 648
Query: 269 DKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIP 328
D P+ V L I + V CGG S ALT+ G +Y WG +A +LG G
Sbjct: 649 DGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLGHG---------- 698
Query: 329 NESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
NE + I ++ V+ + G+ H L D I+GWG N YGQ
Sbjct: 699 NEDHVRYPKIIDILKTKKVKELCVGNLHVLALTEDQLIYGWGRNDYGQ 746
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 109/245 (44%), Gaps = 23/245 (9%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
Q++ G + A++ G + A GY G+LG G T + + P +++ K
Sbjct: 3990 QLTGGEQTLFAVTADGKVYATGYGAVGRLGIGGT-DSVMVPTLLESIQHVF------VKK 4042
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
V+ G H A+S G VY+WG G G+LGH + S D+ P+ + L G I D+AC
Sbjct: 4043 VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDR---PKLIEELLGTEIVDIAC 4099
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
GG HS A+TS G LY WG + G+LG G + E+ ++ I V
Sbjct: 4100 GGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEALQDYKVID----------V 4149
Query: 351 AC--GHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGH 407
AC G + TL D + WG YG+ S P ++ G V K+ G
Sbjct: 4150 ACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVVKVECGSQF 4209
Query: 408 SAVLA 412
S L
Sbjct: 4210 SVALT 4214
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 110/232 (47%), Gaps = 31/232 (13%)
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + WG+N GQLG GL+G +V L E+ + Q++ GE AV+
Sbjct: 3953 GAIYGWGHNHRGQLG------GLEGAKV---KLPVLCESLSALRPVQLTGGEQTLFAVTA 4003
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHSCALTSKGA 303
+G+VY G G+VG+LG + D ++P + ++ +F+K VA GG H AL+S+G
Sbjct: 4004 DGKVYATGYGAVGRLG---IGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGH 4060
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVY 360
+Y+WG G+LG G + +Y R P L+ + + +ACG H+
Sbjct: 4061 VYSWGEGDDGKLGHGNRL-----------SYDR--PKLIEELLGTEIVDIACGGHHSAAI 4107
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
G ++ WG YG+ + S P ++ +V +A G G + L
Sbjct: 4108 TSAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTL 4159
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 83/182 (45%), Gaps = 26/182 (14%)
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSC 296
H A++++ VY+WG G G+LGH GD+ P+ + AL I +ACG +S
Sbjct: 516 HYLALTQDNSVYSWGNGDGGRLGH-----GDRAWYDEPKLIEALVEKNITFIACGSTYSA 570
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NG--VQLVAC- 352
AL+S G LY WG G+LG G SD IP LV NG V VAC
Sbjct: 571 ALSSNGELYTWGRGNYGRLGHG-----------NSDNVM--IPTLVTALNGHMVVYVACG 617
Query: 353 -GHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAV 410
G S TL G + WG +YG+ + P VD + V K+ GG SA
Sbjct: 618 SGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAA 677
Query: 411 LA 412
L
Sbjct: 678 LT 679
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 33/230 (14%)
Query: 190 AWGYNEYGQLGRGITCEGLQGPRV-IKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG N+ QLG GL+G ++ + Y++ L + K ++ G VS+ G+
Sbjct: 2938 VWGLNDKDQLG------GLKGSKIKLPVYSEVLSKL----KPVHIAGGSKTLFVVSQEGK 2987
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHSCALTSKGALYA 306
+Y G G+ G+LG L P+ + L IK V+ GG H+ ALT G +++
Sbjct: 2988 LYACGEGTNGRLG---LGDDSNVCEPKPIPFLSQYVIKKVSVHSGGKHALALTQDGKVFS 3044
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRD 363
WG + G+LG G S SL + P L+ ++ +ACG H+
Sbjct: 3045 WGEGEDGKLGHG---NSISL----------DKPRLIESLKSKRIRDIACGSGHSAAITSS 3091
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
G ++ WG YG+ + + P V VG+ + ++A G + +A
Sbjct: 3092 GELYTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRIIQIACGSRDAQTMA 3141
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 79/198 (39%), Gaps = 33/198 (16%)
Query: 220 FLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA 279
+ D EL I Q+ C E +S NG VY GS Q P+RV
Sbjct: 454 YYDTIAEL-GIKQLCCTERALMILSVNGNVYMMYYGSETQ-------------YPQRVYG 499
Query: 280 LDGIFIKDVA--CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRN 337
I +A G H ALT ++Y+WG G+LG G D + +
Sbjct: 500 FSEKPIIMIASHSDGTHYLALTQDNSVYSWGNGDGGRLGHG-------------DRAWYD 546
Query: 338 IPILV---VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWC 394
P L+ V + +ACG +++ +G ++ WG +YG+ + S P+ V
Sbjct: 547 EPKLIEALVEKNITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDNVMIPTLVTAL 606
Query: 395 VGE-VRKLAAGGGHSAVL 411
G V +A G G S L
Sbjct: 607 NGHMVVYVACGSGDSQTL 624
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 91/227 (40%), Gaps = 25/227 (11%)
Query: 202 GITCEGLQGPRVIKGYAKFLDE--------APELEKITQVSCGEYHSAAVSENGEVYTWG 253
GI C+ ++G ++I F ++ A + E I + + S ++ VY WG
Sbjct: 2882 GIDCK-IRGLQIIGKRKVFENQLATSISFLASDWEIIQEQMNSQRGSEPQPQHSAVYVWG 2940
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
L QLG G K LP L + +A G ++ +G LYA G G
Sbjct: 2941 LNDKDQLGGL---KGSKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGTNG 2997
Query: 314 QLGLGPQTRSFSLIPNESDTYFRNIPIL--VVPNGVQLVACGHSHTLVYMRDGRIHGWGY 371
+LGLG + P IP L V V V G H L +DG++ WG
Sbjct: 2998 RLGLGDDSNVCEPKP---------IPFLSQYVIKKVS-VHSGGKHALALTQDGKVFSWGE 3047
Query: 372 NSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADACSL 417
G+ + S P ++ + +R +A G GHSA + + L
Sbjct: 3048 GEDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGEL 3094
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 73/170 (42%), Gaps = 12/170 (7%)
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G +Y WG GQLG G K LP +L + + G A+T+ G +Y
Sbjct: 3952 SGAIYGWGHNHRGQLGGL---EGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVY 4008
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
A G G+LG+G T S ++P T +I + V V G H L +G
Sbjct: 4009 ATGYGAVGRLGIG-GTDSV-MVP----TLLESIQHVFVKKVA--VNSGGKHCLALSSEGH 4060
Query: 366 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADA 414
++ WG G+ + P ++ +G E+ +A GG HSA + A
Sbjct: 4061 VYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSA 4110
>gi|348685253|gb|EGZ25068.1| hypothetical protein PHYSODRAFT_326137 [Phytophthora sojae]
Length = 5016
Score = 124 bits (310), Expect = 1e-25, Method: Composition-based stats.
Identities = 111/403 (27%), Positives = 163/403 (40%), Gaps = 66/403 (16%)
Query: 18 PAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIA---CGHEHT 74
P + + WG N +G+ G P + P L IA CG H
Sbjct: 190 PRGTTLLAWGLNSNGELGNG-----TMTSSPTPQMVVTFPLHFQREPLSIAHVSCGKHHV 244
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
A + LFTWG+N++GQLG G R PE+V A ++ R
Sbjct: 245 AVITGQARLFTWGSNKYGQLGLGDFSSRTQPEEVH--------------FALATLSSHRR 290
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
+ T Q+ G+N + V+CG+ H + ++ + GYN
Sbjct: 291 ALRVMHTV------QHGGNN--------------VTHVACGAAHTLFVTHQQQILGMGYN 330
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+ GQLG G + +G R E+ + I + G+ HSA V NG+VYTWG
Sbjct: 331 QAGQLGLGHRLQQYKGWR---SCTPITVESLRDQSILDLGAGQNHSACVLSNGDVYTWGC 387
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALD--GIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G G+LG L G+ +P + L I + V CG H ++ LY WG +
Sbjct: 388 GDDGRLGDGKL--GEGVAVPTLIPLLREASIRARTVRCGARHMAVISDSDLLYIWGANDF 445
Query: 313 GQLGL---GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGW 369
GQLG P+++ F L P L GV+ VA G HT G+ + W
Sbjct: 446 GQLGCKDRKPRSQPFLLA----------TPPLFA-EGVEDVALGEFHTTCVTSAGKAYTW 494
Query: 370 GYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 411
G N +A S + P +D E VRK++ G H+ ++
Sbjct: 495 GLNLRDNSALVASHHT--PQAIDLPEKERVRKVSCGWTHTDIV 535
Score = 84.3 bits (207), Expect = 1e-13, Method: Composition-based stats.
Identities = 83/302 (27%), Positives = 112/302 (37%), Gaps = 48/302 (15%)
Query: 106 EKVKQLQSEFVKSISCGAH-CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPR-LFWGAF 163
+ +Q S V ++ G H AA+A+PR GT L WG N +
Sbjct: 163 DAAEQDASWCVSHLASGCHFSVAAVAQPR---GTT----LLAWGLNSNGELGNGTMTSSP 215
Query: 164 TPNTI-------------ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQG 210
TP + I VSCG HV ++ L WG N+YGQLG G Q
Sbjct: 216 TPQMVVTFPLHFQREPLSIAHVSCGKHHVAVITGQARLFTWGSNKYGQLGLGDFSSRTQP 275
Query: 211 PRVIKGYAKFLDEAPELE----------KITQVSCGEYHSAAVSENGEVYTWGLGSVGQL 260
V A L +T V+CG H+ V+ ++ G GQL
Sbjct: 276 EEVHFALATLSSHRRALRVMHTVQHGGNNVTHVACGAAHTLFVTHQQQILGMGYNQAGQL 335
Query: 261 G---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG- 316
G G + P V +L I D+ G HS + S G +Y WG G+LG
Sbjct: 336 GLGHRLQQYKGWRSCTPITVESLRDQSILDLGAGQNHSACVLSNGDVYTWGCGDDGRLGD 395
Query: 317 --LGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LG +LIP + R + V CG H V ++ WG N +
Sbjct: 396 GKLGEGVAVPTLIPLLREASIR----------ARTVRCGARHMAVISDSDLLYIWGANDF 445
Query: 375 GQ 376
GQ
Sbjct: 446 GQ 447
Score = 80.9 bits (198), Expect = 2e-12, Method: Composition-based stats.
Identities = 76/293 (25%), Positives = 117/293 (39%), Gaps = 78/293 (26%)
Query: 27 GYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTW 86
GYN +GQ G R +Q + + P + + LD+ G H+A V S+G ++TW
Sbjct: 328 GYNQAGQLGLGHRLQQYKGWRSCTP--ITVESLRDQSILDLGAGQNHSACVLSNGDVYTW 385
Query: 87 GANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLW 145
G + G+LGDG EG P + L+ +++ +
Sbjct: 386 GCGDDGRLGDGKLGEGVAVPTLIPLLREASIRART------------------------- 420
Query: 146 VWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITC 205
V CG+ H+ +S+ LL WG N++GQLG C
Sbjct: 421 --------------------------VRCGARHMAVISDSDLLYIWGANDFGQLG----C 450
Query: 206 EGLQGPRVIKGYAKFLDEAPEL--EKITQVSCGEYHSAAVSENGEVYTWGL----GSVGQ 259
+ + PR FL P L E + V+ GE+H+ V+ G+ YTWGL S
Sbjct: 451 KD-RKPRS----QPFLLATPPLFAEGVEDVALGEFHTTCVTSAGKAYTWGLNLRDNSALV 505
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
H + Q+ D LP + ++ V+CG H+ +T A A Q
Sbjct: 506 ASHHTPQAID---LPEKER------VRKVSCGWTHTDIVTHINAEEASASGQG 549
Score = 53.5 bits (127), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/149 (29%), Positives = 61/149 (40%), Gaps = 21/149 (14%)
Query: 11 ARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACG 70
AR + I +Y+WG N GQ G K R+ P+ P L P D+A G
Sbjct: 425 ARHMAVISDSDLLYIWGANDFGQLGCKDRK-----PRS-QPFLLATPPLFAEGVEDVALG 478
Query: 71 HEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKH--PEKVKQLQSEFVKSISCGAHCTAA 128
HT V S G +TWG N L D + H P+ + + E V+ +SCG T
Sbjct: 479 EFHTTCVTSAGKAYTWGLN----LRDNSALVASHHTPQAIDLPEKERVRKVSCGWTHTDI 534
Query: 129 IAEPRENDGTISTSRLWVWGQNQGSNFPR 157
+ + + S QG+NF R
Sbjct: 535 VTHINAEEASAS---------GQGTNFDR 554
>gi|328793081|ref|XP_395007.4| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Apis mellifera]
Length = 4643
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 177/418 (42%), Gaps = 94/418 (22%)
Query: 5 EIIGE---TARPVDNIPAKSAIYVWGYNHSGQTG-RKGRERQL----RIPKQLPP----- 51
EII E + R + P SA+YVWG N Q G KG + +L + +L P
Sbjct: 2771 EIIQEQMNSQRGSEPQPQHSAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPVHIAG 2830
Query: 52 ------------ELFGCPAGANSRW------------------------LDIACGHEHTA 75
+L+ C G N R + + G +H
Sbjct: 2831 GSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVAVHSGGKHAL 2890
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
A+ DG +F+WG E G+LG G P ++ L+S+ ++ I+CG+ +AAI
Sbjct: 2891 ALTQDGKVFSWGEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAIT----- 2945
Query: 136 DGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGS--VHVVALS 183
S+ L+ WG + P+L I Q++CGS +AL+
Sbjct: 2946 ----SSGELYTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRVI--QIACGSRDAQTMALT 2999
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
GL+ +WG ++G+LGRG +G P +I + Q+ CG S A+
Sbjct: 3000 ADGLVYSWGDGDFGKLGRG-GSDGCYTPLLIDRLNGL--------GVVQIECGAQFSLAL 3050
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
++ GEV+TWG G +LGH + K P V L G I VA G +H A+T G
Sbjct: 3051 TKYGEVWTWGKGDYFRLGHGNDHHVRK---PTLVEGLRGKKIIHVAVGALHCLAVTDIGQ 3107
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
+YAWG + GQ G G + I N+ + + V V+CG SH++ ++
Sbjct: 3108 VYAWGDNDHGQQGNG------TTIVNKKPSLVHELD----DARVNRVSCGSSHSIAWV 3155
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 160/360 (44%), Gaps = 59/360 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y GY G+ G G + + P L + + + G +H A
Sbjct: 3832 VTADGKVYATGYGAVGRLGIGGTD------SVMVPTLLESIQHVFVKKVAVNSGGKHCLA 3885
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
++S+G +++WG + G+LG G P+ +++L + I+CG H +AAI
Sbjct: 3886 LSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAIT------ 3939
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGS--VHVVALS 183
S L+ WG+ + + RL G TP I + V+CGS + ++
Sbjct: 3940 ---SAGWLYTWGKGR---YGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVT 3993
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ + +WG +YG+LGRG +G + P I+ A + +V CG S A+
Sbjct: 3994 DDDNVWSWGDGDYGKLGRG-GSDGCKIPMKIESLAGL--------GVIKVECGSQFSVAL 4044
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+ +G +YTWG G +LGH + D PR+V AL G I +A G +H A T KG
Sbjct: 4045 TRSGAIYTWGKGDYHRLGH---GTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGE 4101
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 360
++ WG + GQLG G T P LV + VACG +HTL +
Sbjct: 4102 VFTWGDNDEGQLGDG-------------TTSALQRPRLVHALQGKKITRVACGSAHTLAW 4148
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 176/406 (43%), Gaps = 64/406 (15%)
Query: 22 AIYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
AIY WG+NH GQ G G E ++++P C + + R + + G + AV +D
Sbjct: 3785 AIYGWGHNHRGQLG--GLEGAKVKLP-------VLCESLSALRPVQLTGGEQTLFAVTAD 3835
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDG 137
G ++ G G+LG G + P ++ +Q FVK ++ G HC A +E
Sbjct: 3836 GKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSE------ 3889
Query: 138 TISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
++ WG+ P+L T I ++CG H A++ G
Sbjct: 3890 ----GHVYSWGEGDDGKLGHGNRLSYDRPKLIEELL--GTEIVDIACGGHHSAAITSAGW 3943
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSE 245
L WG YG+LG G + + L P++I+ + K+ V+C G+ + V++
Sbjct: 3944 LYTWGKGRYGRLGHGDSEDQLT-PKLIEALQDY--------KVIDVACGSGDAQTLCVTD 3994
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+ V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 3995 DDNVWSWGDGDYGKLGR---GGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIY 4051
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRD 363
WG +LG G +D + R + G ++ +A G H +
Sbjct: 4052 TWGKGDYHRLGHG------------TDDHVRRPRKVAALQGKKIISIATGSLHCVACTDK 4099
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
G + WG N GQ + ++ P V G ++ ++A G H+
Sbjct: 4100 GEVFTWGDNDEGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHT 4145
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 152/336 (45%), Gaps = 51/336 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R PK L EL G + +DIACG H+AA+ S G
Sbjct: 3892 VYSWGEGDDGKLGHGNRLSYDR-PK-LIEELLG------TEIVDIACGGHHSAAITSAGW 3943
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG G E + P+ ++ LQ V ++CG+ + +++
Sbjct: 3944 LYTWGKGRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDN------ 3997
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
+W WG R G P I + +V CGS VAL+ G + WG
Sbjct: 3998 -VWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKG 4056
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G T + ++ PR + A + +KI ++ G H A ++ GEV+TWG
Sbjct: 4057 DYHRLGHG-TDDHVRRPRKVA--------ALQGKKIISIATGSLHCVACTDKGEVFTWGD 4107
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G I VACG H+ AW +A Q
Sbjct: 4108 NDEGQLGDGTTSALQR---PRLVHALQGKKITRVACGSAHT---------LAWSTMKATQ 4155
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
+ T P E D +++P V+ N + L+
Sbjct: 4156 SKMPATT------PMEYD-LVKDLPFPVLHNRLVLL 4184
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 139/295 (47%), Gaps = 43/295 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G+ G + + K P L + + R DIACG H+AA+ S G
Sbjct: 2898 VFSWG---EGEDGKLGHGNSISLDK---PRLI--ESLKSKRIRDIACGSGHSAAITSSGE 2949
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ V+ L + V I+CG+ +A DG +
Sbjct: 2950 LYTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRVIQIACGSRDAQTMA--LTADGLV--- 3004
Query: 143 RLWVWGQNQGSNFPRLFWGA----FTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+ WG +F +L G +TP I + Q+ CG+ +AL++ G + W
Sbjct: 3005 --YSWGD---GDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTW 3059
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P +++G +KI V+ G H AV++ G+VY
Sbjct: 3060 GKGDYFRLGHG-NDHHVRKPTLVEGLRG--------KKIIHVAVGALHCLAVTDIGQVYA 3110
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA--LTSKGAL 304
WG GQ G+ + K P V LD + V+CG HS A LT + A+
Sbjct: 3111 WGDNDHGQQGNGTTIVNKK---PSLVHELDDARVNRVSCGSSHSIAWVLTDQPAI 3162
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 125/258 (48%), Gaps = 39/258 (15%)
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
H A+ D ++++WG E G+LG G P+ ++ L + + I+CG+ +AA++
Sbjct: 513 HYLALTQDNSVYSWGNGECGRLGHGNMTWYDEPKLIEALVEKNITFIACGSTYSAALS-- 570
Query: 133 RENDGTISTSRLWVWGQNQGSNFPRLFWG-----AFTPNTI-------ICQVSCG---SV 177
S L+ WG+ N+ +L G P + + V+CG
Sbjct: 571 -------SNGELYTWGR---GNYGKLGHGNSDKDVMIPTLVTALNGHMVVYVACGGGRDP 620
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
+ ++ G++ +WG +G+LGRG C+G + P+++ K LD + +V CG+
Sbjct: 621 QTLCVTASGIVFSWGDGNHGKLGRG-GCDGSKTPKIVD---KLLD-----INVAKVYCGQ 671
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
SAA++ GEVYTWG G +LGH + D P+ + L IKD+ G +H A
Sbjct: 672 QFSAALTAYGEVYTWGKGEDYKLGH---GNEDHVRYPKIIDILKTKKIKDLYIGHLHVLA 728
Query: 298 LTSKGALYAWGGSQAGQL 315
LT +Y WG + GQ+
Sbjct: 729 LTEDQLVYGWGRNDHGQI 746
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 125/277 (45%), Gaps = 59/277 (21%)
Query: 146 VWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITC 205
V+ GS R++ + P T+I S G+ H +AL++ + +WG E G+LG G
Sbjct: 482 VYMMYYGSETQRVYGFSEKPITMIASHSDGT-HYLALTQDNSVYSWGNGECGRLGHG-NM 539
Query: 206 EGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSL 265
P++I+ + + IT ++CG +SAA+S NGE+YTWG G+ G+LGH
Sbjct: 540 TWYDEPKLIEALVE--------KNITFIACGSTYSAALSSNGELYTWGRGNYGKLGH--- 588
Query: 266 QSGDKE-LLPRRVVALDGIFIKDVACGG---VHSCALTSKGALYAWGGSQAGQLGLG--- 318
+ DK+ ++P V AL+G + VACGG + +T+ G +++WG G+LG G
Sbjct: 589 GNSDKDVMIPTLVTALNGHMVVYVACGGGRDPQTLCVTASGIVFSWGDGNHGKLGRGGCD 648
Query: 319 ----PQTRSFSLIPNESDTY-----------------------------------FRNIP 339
P+ L N + Y + I
Sbjct: 649 GSKTPKIVDKLLDINVAKVYCGQQFSAALTAYGEVYTWGKGEDYKLGHGNEDHVRYPKII 708
Query: 340 ILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
++ ++ + GH H L D ++GWG N +GQ
Sbjct: 709 DILKTKKIKDLYIGHLHVLALTEDQLVYGWGRNDHGQ 745
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 140/306 (45%), Gaps = 46/306 (15%)
Query: 107 KVKQLQSEFVKSISCGAHCTAAIAEP----RENDGTISTSRLWVWGQN--------QGSN 154
K K +++ SIS A I E R ++ S ++VWG N +GS
Sbjct: 2751 KRKVFENQLATSISFLASDWEIIQEQMNSQRGSEPQPQHSAVYVWGLNDKDQLGGLKGSK 2810
Query: 155 FPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGI---TCEGLQGP 211
+ ++ GS + +S+ G L A G G+LG G CE P
Sbjct: 2811 IKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCE----P 2866
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
+ I ++++ ++K+ V G H+ A++++G+V++WG G G+LGH + S DK
Sbjct: 2867 KPIPFLSQYV-----IKKVA-VHSGGKHALALTQDGKVFSWGEGEDGKLGHGNSISLDK- 2919
Query: 272 LLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNES 331
PR + +L I+D+ACG HS A+TS G LY WG + G+LG G
Sbjct: 2920 --PRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHG------------- 2964
Query: 332 DTYFRNIPILV---VPNGVQLVACG--HSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAW 386
DT ++ P LV V V +ACG + T+ DG ++ WG +G+ S +
Sbjct: 2965 DTATQSKPKLVQSLVGQRVIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGGSDGCY 3024
Query: 387 YPSPVD 392
P +D
Sbjct: 3025 TPLLID 3030
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 109/245 (44%), Gaps = 23/245 (9%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
Q++ G + A++ G + A GY G+LG G T + + P +++ K
Sbjct: 3821 QLTGGEQTLFAVTADGKVYATGYGAVGRLGIGGT-DSVMVPTLLESIQHVF------VKK 3873
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
V+ G H A+S G VY+WG G G+LGH + S D+ P+ + L G I D+AC
Sbjct: 3874 VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDR---PKLIEELLGTEIVDIAC 3930
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
GG HS A+TS G LY WG + G+LG G + E+ ++ I V
Sbjct: 3931 GGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEALQDYKVID----------V 3980
Query: 351 AC--GHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGH 407
AC G + TL D + WG YG+ S P ++ G V K+ G
Sbjct: 3981 ACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQF 4040
Query: 408 SAVLA 412
S L
Sbjct: 4041 SVALT 4045
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 110/232 (47%), Gaps = 31/232 (13%)
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + WG+N GQLG GL+G +V L E+ + Q++ GE AV+
Sbjct: 3784 GAIYGWGHNHRGQLG------GLEGAKV---KLPVLCESLSALRPVQLTGGEQTLFAVTA 3834
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHSCALTSKGA 303
+G+VY G G+VG+LG + D ++P + ++ +F+K VA GG H AL+S+G
Sbjct: 3835 DGKVYATGYGAVGRLG---IGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGH 3891
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVY 360
+Y+WG G+LG G + +Y R P L+ + + +ACG H+
Sbjct: 3892 VYSWGEGDDGKLGHGNRL-----------SYDR--PKLIEELLGTEIVDIACGGHHSAAI 3938
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
G ++ WG YG+ + S P ++ +V +A G G + L
Sbjct: 3939 TSAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTL 3990
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 103/230 (44%), Gaps = 33/230 (14%)
Query: 190 AWGYNEYGQLGRGITCEGLQGPRV-IKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG N+ QLG GL+G ++ + Y++ L + K ++ G VS+ G+
Sbjct: 2794 VWGLNDKDQLG------GLKGSKIKLPVYSEVLSKL----KPVHIAGGSKTLFVVSQEGK 2843
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHSCALTSKGALYA 306
+Y G G+ G+LG L P+ + L IK VA GG H+ ALT G +++
Sbjct: 2844 LYACGEGTNGRLG---LGDDSNVCEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGKVFS 2900
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYMRD 363
WG + G+LG G S SL + P L+ ++ +ACG H+
Sbjct: 2901 WGEGEDGKLGHG---NSISL----------DKPRLIESLKSKRIRDIACGSGHSAAITSS 2947
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
G ++ WG YG+ + + P V VG+ V ++A G + +A
Sbjct: 2948 GELYTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRVIQIACGSRDAQTMA 2997
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 87/241 (36%), Gaps = 64/241 (26%)
Query: 220 FLDEAPELEKITQVSCGEYHSAAVSENGEVYT---------------------------- 251
+ D EL I Q+ C E +S NG VY
Sbjct: 454 YYDTISEL-GIKQLCCTERAVIILSVNGNVYMMYYGSETQRVYGFSEKPITMIASHSDGT 512
Query: 252 -------------WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
WG G G+LGH ++ D+ P+ + AL I +ACG +S AL
Sbjct: 513 HYLALTQDNSVYSWGNGECGRLGHGNMTWYDE---PKLIEALVEKNITFIACGSTYSAAL 569
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NG--VQLVACG-- 353
+S G LY WG G+LG G + IP LV NG V VACG
Sbjct: 570 SSNGELYTWGRGNYGKLGHGNSDKDVM------------IPTLVTALNGHMVVYVACGGG 617
Query: 354 -HSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
TL G + WG ++G+ + P VD + V K+ G SA L
Sbjct: 618 RDPQTLCVTASGIVFSWGDGNHGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGQQFSAAL 677
Query: 412 A 412
Sbjct: 678 T 678
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 90/227 (39%), Gaps = 25/227 (11%)
Query: 202 GITCEGLQGPRVIKGYAKFLDE--------APELEKITQVSCGEYHSAAVSENGEVYTWG 253
GI C+ ++G ++I F ++ A + E I + + S ++ VY WG
Sbjct: 2738 GIDCK-IRGLQIIGKRKVFENQLATSISFLASDWEIIQEQMNSQRGSEPQPQHSAVYVWG 2796
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
L QLG G K LP L + +A G ++ +G LYA G G
Sbjct: 2797 LNDKDQLGGLK---GSKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGTNG 2853
Query: 314 QLGLGPQTR--SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGY 371
+LGLG + IP S + + V G H L +DG++ WG
Sbjct: 2854 RLGLGDDSNVCEPKPIPFLSQYVIKKVA----------VHSGGKHALALTQDGKVFSWGE 2903
Query: 372 NSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADACSL 417
G+ + S P ++ + +R +A G GHSA + + L
Sbjct: 2904 GEDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGEL 2950
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 73/170 (42%), Gaps = 12/170 (7%)
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G +Y WG GQLG G K LP +L + + G A+T+ G +Y
Sbjct: 3783 SGAIYGWGHNHRGQLGGL---EGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVY 3839
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
A G G+LG+G T S ++P T +I + V V G H L +G
Sbjct: 3840 ATGYGAVGRLGIG-GTDSV-MVP----TLLESIQHVFVKKVA--VNSGGKHCLALSSEGH 3891
Query: 366 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADA 414
++ WG G+ + P ++ +G E+ +A GG HSA + A
Sbjct: 3892 VYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSA 3941
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 45/117 (38%), Gaps = 13/117 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG + G G E +R PK + + D+ GH H A
Sbjct: 677 LTAYGEVYTWGKGEDYKLGH-GNEDHVRYPKIID-------ILKTKKIKDLYIGHLHVLA 728
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-----AHCTAA 128
+ D ++ WG N+ GQ+ P + V ++CG A CTAA
Sbjct: 729 LTEDQLVYGWGRNDHGQIDPALGTIVPEPTLCPTFSGKNVIGLACGPTQSFAWCTAA 785
>gi|307168816|gb|EFN61765.1| RCC1 and BTB domain-containing protein 1 [Camponotus floridanus]
Length = 538
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/265 (34%), Positives = 131/265 (49%), Gaps = 41/265 (15%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTAAIAEPRE 134
V D +++ G N G LG +P+K++ L + +K+ +CG+ H A+ E E
Sbjct: 39 VMKDKSVYGLGNNIAGCLGISDAHSTLYPKKIEVLCDKDIKTFACGSGPH-VLALTEKGE 97
Query: 135 NDGTISTSRLWVWGQN-----------QG-----SNFPRLFWGAFTPNTIICQVSCGSVH 178
++ WG N QG N P L GA I V+CGS H
Sbjct: 98 ---------VYSWGHNSYCELGNGTCNQGLTPILVNIPTL--GAGLNMKCIVDVACGSHH 146
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
+AL+E G + AWG N GQ+G I+ +V A +KI +SCG+
Sbjct: 147 SLALTEEGEVYAWGQNNCGQVGSNISTNQGSPRQVTSNLAG--------KKIVHISCGQT 198
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
S V++NGEVY WG VGQLG + + ++ P RV +L G+ I VACG H+ AL
Sbjct: 199 SSMVVTDNGEVYGWGYNGVGQLG---IGNYVNQMTPSRVGSLIGVVIIKVACGYAHTLAL 255
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRS 323
+ +G LY WGG+ GQLG+G +T +
Sbjct: 256 SDEGKLYVWGGNSYGQLGIGNKTNA 280
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 126/238 (52%), Gaps = 20/238 (8%)
Query: 169 ICQVSCGS-VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL 227
I +CGS HV+AL+E G + +WG+N Y +LG G +GL P ++ L +
Sbjct: 78 IKTFACGSGPHVLALTEKGEVYSWGHNSYCELGNGTCNQGLT-PILVN--IPTLGAGLNM 134
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG-HCSLQSGDKELLPRRVVA-LDGIFI 285
+ I V+CG +HS A++E GEVY WG + GQ+G + S G PR+V + L G I
Sbjct: 135 KCIVDVACGSHHSLALTEEGEVYAWGQNNCGQVGSNISTNQGS----PRQVTSNLAGKKI 190
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
++CG S +T G +Y WG + GQLG+G + P+ + I ++++
Sbjct: 191 VHISCGQTSSMVVTDNGEVYGWGYNGVGQLGIGNYVNQMT--PSRVGSL---IGVVIIK- 244
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 403
VACG++HTL +G+++ WG NSYGQ T A P V +G + +AA
Sbjct: 245 ----VACGYAHTLALSDEGKLYVWGGNSYGQLGIGNKTNACNPVLVTHEMGRISDIAA 298
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 108/450 (24%), Positives = 180/450 (40%), Gaps = 89/450 (19%)
Query: 67 IACGH-EHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQ------LQSEFVKSI 119
ACG H A+ G +++WG N + +LG+GT P V L + + +
Sbjct: 81 FACGSGPHVLALTEKGEVYSWGHNSYCELGNGTCNQGLTPILVNIPTLGAGLNMKCIVDV 140
Query: 120 SCGAHCTAAIAEPRENDGTISTSRLWVWGQNQ----GSNF------PRLFWGAFTPNTII 169
+CG+H + A+ E E ++ WGQN GSN PR I+
Sbjct: 141 ACGSHHSLALTEEGE---------VYAWGQNNCGQVGSNISTNQGSPRQVTSNLAGKKIV 191
Query: 170 CQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV--IKGYAKFLDEAPEL 227
+SCG + +++ G + WGYN GQLG G + RV + G
Sbjct: 192 -HISCGQTSSMVVTDNGEVYGWGYNGVGQLGIGNYVNQMTPSRVGSLIGVV--------- 241
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI-FIK 286
I +V+CG H+ A+S+ G++Y WG S GQLG G+K V+ + I
Sbjct: 242 --IIKVACGYAHTLALSDEGKLYVWGGNSYGQLG-----IGNKTNACNPVLVTHEMGRIS 294
Query: 287 DVACGGVH----SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTY----FRNI 338
D+A +H S A+ G +Y WG + GQ P F+ + + Y
Sbjct: 295 DIA--ALHYNHISTAVGVGGRVYMWGNCR-GQSISTPTPTPFTDMHDTFACYGWPSVMYK 351
Query: 339 PILVVPN-GVQLVACG---------------------HSHTLV------YMRDGRIHGWG 370
P+++ N ++ C H H + Y R H W
Sbjct: 352 PLILHENEDSSILECLGTAFDDSSTSDLTIQVNGQAIHVHKAILKIRSSYFRTMFQHNWA 411
Query: 371 YNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAV-LADAC---SLKELCEFRLA 426
N+ +++ +Y Y + + + ++ L + LA+A +LK C +
Sbjct: 412 ENNQSIIEHDQFSYVVYKAFLKYLYTDLIDLPTEKALELLDLANAYCENNLKRHCIQMIK 471
Query: 427 ESVTLSNASEIEDVASRTGSEALARLCERL 456
+ +++SNA+ + VA ++ L C +
Sbjct: 472 QGISISNAAYLYSVAIEYNAKELEEFCFKF 501
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 16/128 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG N+ GQ G Q P+Q+ L G + + I+CG + V +G
Sbjct: 156 VYAWGQNNCGQVGSNISTNQGS-PRQVTSNLAG------KKIVHISCGQTSSMVVTDNGE 208
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG N GQLG G + P +V L + ++CG T A+++
Sbjct: 209 VYGWGYNGVGQLGIGNYVNQMTPSRVGSLIGVVIIKVACGYAHTLALSDE---------G 259
Query: 143 RLWVWGQN 150
+L+VWG N
Sbjct: 260 KLYVWGGN 267
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 10/103 (9%)
Query: 8 GETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDI 67
G+T+ V + +Y WGYN GQ G Q+ P G G + +
Sbjct: 196 GQTSSMV--VTDNGEVYGWGYNGVGQLGIG------NYVNQMTPSRVGSLIGV--VIIKV 245
Query: 68 ACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQ 110
ACG+ HT A++ +G L+ WG N +GQLG G + +P V
Sbjct: 246 ACGYAHTLALSDEGKLYVWGGNSYGQLGIGNKTNACNPVLVTH 288
>gi|340711630|ref|XP_003394376.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
HERC2-like [Bombus terrestris]
Length = 5151
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 172/403 (42%), Gaps = 93/403 (23%)
Query: 18 PAKSAIYVWGYNHSGQTG-RKGRERQL----RIPKQLPP-----------------ELFG 55
P SA+YVWG N Q G KG + +L + +L P +L+
Sbjct: 3256 PQHSAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYA 3315
Query: 56 CPAGANSRW------------------------LDIACGHEHTAAVASDGTLFTWGANEF 91
C G N R + + G +H A+ DG +F+WG E
Sbjct: 3316 CGEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKMAVHSGGKHALALTQDGKIFSWGEGED 3375
Query: 92 GQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQ 151
G+LG G P ++ L+S+ ++ I+CG+ +AAI S+ L+ WG +
Sbjct: 3376 GKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAIT---------SSGELYTWGLGE 3426
Query: 152 GSNFPRLFWG----AFTPNTI-------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQ 198
+ RL G P + + QV+CGS +AL+ G + +WG ++G+
Sbjct: 3427 ---YGRLGHGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGK 3483
Query: 199 LGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVG 258
LGRG +G P +I + Q+ CG S A+++ GEV+TWG G
Sbjct: 3484 LGRG-GSDGCYTPLLIDRLNGL--------GVVQIECGAQFSLALTKYGEVWTWGKGDYF 3534
Query: 259 QLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLG 318
+LGH + K P V L G + VA G +H A+T G +YAWG + GQ G G
Sbjct: 3535 RLGHGNDHHVRK---PTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG 3591
Query: 319 PQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
S I N+ + + V V+CG SH++ ++
Sbjct: 3592 ------STIVNKKPSLVHELD----DARVNRVSCGSSHSIAWV 3624
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 153/336 (45%), Gaps = 51/336 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R PK L EL G + +DIACG H+AA+ S G
Sbjct: 4400 VYSWGEGDDGKLGHGNRLMYDR-PK-LIEELLG------TEIVDIACGGHHSAAITSAGW 4451
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG G E + P+ V+ LQ V ++CG+ + +++
Sbjct: 4452 LYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDN------ 4505
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
+W WG R G P I + +V CGS VAL+ G + WG
Sbjct: 4506 -VWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKG 4564
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G T + ++ PR + A + +KI ++ G H A ++ GEV+TWG
Sbjct: 4565 DYHRLGHG-TDDHVRRPRKVA--------ALQGKKIISIATGSLHCVACTDKGEVFTWGD 4615
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G I VACG H+ AW +A
Sbjct: 4616 NDEGQLGDGTTSALQR---PRLVHALQGKKITRVACGSAHT---------LAWSTMKAT- 4662
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
Q+R + P E D +++P V+ N + L+
Sbjct: 4663 -----QSRMPATTPMEYD-LVKDLPFPVLHNRLVLL 4692
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 161/360 (44%), Gaps = 59/360 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y GY +G+ G G + + P L + + + G +H A
Sbjct: 4340 VTADGKVYATGYGAAGRLGIGGTD------SVMVPTLLESIQHVFVKKVAVNSGGKHCLA 4393
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
++S+G +++WG + G+LG G P+ +++L + I+CG H +AAI
Sbjct: 4394 LSSEGHVYSWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAIT------ 4447
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGS--VHVVALS 183
S L+ WG+ + + RL G TP + + V+CGS + ++
Sbjct: 4448 ---SAGWLYTWGKGR---YGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVT 4501
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ + +WG +YG+LGRG +G + P I+ A + +V CG S A+
Sbjct: 4502 DDDNVWSWGDGDYGKLGRG-GSDGCKIPMKIESLAGL--------GVIKVECGSQFSVAL 4552
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+ +G +YTWG G +LGH + D PR+V AL G I +A G +H A T KG
Sbjct: 4553 TRSGAIYTWGKGDYHRLGH---GTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGE 4609
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 360
++ WG + GQLG G T P LV + VACG +HTL +
Sbjct: 4610 VFTWGDNDEGQLGDG-------------TTSALQRPRLVHALQGKKITRVACGSAHTLAW 4656
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 105/406 (25%), Positives = 176/406 (43%), Gaps = 64/406 (15%)
Query: 22 AIYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
AIY WG+NH GQ G G E ++++P C + + R + + G + AV +D
Sbjct: 4293 AIYGWGHNHRGQLG--GLEGAKVKLP-------VLCESLSALRPVQLTGGEQTLLAVTAD 4343
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDG 137
G ++ G G+LG G + P ++ +Q FVK ++ G HC A +E
Sbjct: 4344 GKVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSE------ 4397
Query: 138 TISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
++ WG+ P+L T I ++CG H A++ G
Sbjct: 4398 ----GHVYSWGEGDDGKLGHGNRLMYDRPKLIEELL--GTEIVDIACGGHHSAAITSAGW 4451
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSE 245
L WG YG+LG G + + L P++++ + K+ V+C G+ + V++
Sbjct: 4452 LYTWGKGRYGRLGHGDSEDQLT-PKLVEALQDY--------KVIDVACGSGDAQTLCVTD 4502
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+ V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4503 DDNVWSWGDGDYGKLGR---GGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIY 4559
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRD 363
WG +LG G +D + R + G ++ +A G H +
Sbjct: 4560 TWGKGDYHRLGHG------------TDDHVRRPRKVAALQGKKIISIATGSLHCVACTDK 4607
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
G + WG N GQ + ++ P V G ++ ++A G H+
Sbjct: 4608 GEVFTWGDNDEGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHT 4653
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 132/276 (47%), Gaps = 43/276 (15%)
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
H A+ D ++++WG + G+LG G P+ V+ L + + I+CG+ +A ++
Sbjct: 516 HYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGSTYSAVLS-- 573
Query: 133 RENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGS--VHV 179
S L+ WG+ N+ RL G P + + V+CGS
Sbjct: 574 -------SNGELYTWGRG---NYGRLGHGNSDNVLIPTLVTALNGHMVVHVACGSGDSQT 623
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
+ ++ G++ +WG YG+LGRG C+G + P+++ K LD + +V CG
Sbjct: 624 LCVTASGIVFSWGDGNYGKLGRG-GCDGSKTPKIVD---KLLD-----INVAKVYCGGQF 674
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCA 297
SAA++ GEVYTWG G +LGH G++E + P+ + L +K++ G H A
Sbjct: 675 SAALTAYGEVYTWGKGEGYRLGH-----GNEEHIRYPKVIEVLXTKKVKELCVGNFHVLA 729
Query: 298 LTSKGALYAWGGSQAGQL--GLGPQTRSFSLIPNES 331
LT +Y WG + GQ+ LG +L P S
Sbjct: 730 LTEDQLVYGWGRNDYGQIDPALGTVVPEPTLCPTLS 765
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 123/288 (42%), Gaps = 47/288 (16%)
Query: 103 KHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNF------- 155
++P++V + V I+ + T +A ++ S ++ WG G
Sbjct: 492 QYPQRVYGFSEKPVTMIASHSDGTHYLALTQD-------SSVYSWGNGDGGRLGHGDRVW 544
Query: 156 ---PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPR 212
P+L N I ++CGS + LS G L WG YG+LG G + + P
Sbjct: 545 YDEPKLVEALVDKN--ITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHG-NSDNVLIPT 601
Query: 213 VIKGYAKFLDEAPELEKITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGH--CSLQSG 268
++ + + V+CG + + V+ +G V++WG G+ G+LG C
Sbjct: 602 LVTALNGHM--------VVHVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGC----- 648
Query: 269 DKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIP 328
D P+ V L I + V CGG S ALT+ G +Y WG + +LG G
Sbjct: 649 DGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYRLGHG---------- 698
Query: 329 NESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
NE + + ++ V+ + G+ H L D ++GWG N YGQ
Sbjct: 699 NEEHIRYPKVIEVLXTKKVKELCVGNFHVLALTEDQLVYGWGRNDYGQ 746
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 143/344 (41%), Gaps = 40/344 (11%)
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G ++ WG N GQLG K P + L + ++ G A+ DG +
Sbjct: 4292 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTA----DGKVY 4347
Query: 141 TS------RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
+ RL + G + P L V+ G H +ALS G + +WG
Sbjct: 4348 ATGYGAAGRLGIGGTD-SVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEG 4406
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+ G+LG G R++ K ++E E I ++CG +HSAA++ G +YTWG
Sbjct: 4407 DDGKLG--------HGNRLMYDRPKLIEELLGTE-IVDIACGGHHSAAITSAGWLYTWGK 4457
Query: 255 GSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGS 310
G G+LGH GD E L P+ V AL + DVACG + +T +++WG
Sbjct: 4458 GRYGRLGH-----GDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDG 4512
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWG 370
G+LG G IP + ++ + GV V CG ++ R G I+ WG
Sbjct: 4513 DYGKLGRGGS--DGCKIPMKIES--------LAGLGVIKVECGSQFSVALTRSGAIYTWG 4562
Query: 371 YNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
Y + + + P V G ++ +A G H D
Sbjct: 4563 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTD 4606
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 82/182 (45%), Gaps = 26/182 (14%)
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSC 296
H A++++ VY+WG G G+LGH GD+ P+ V AL I +ACG +S
Sbjct: 516 HYLALTQDSSVYSWGNGDGGRLGH-----GDRVWYDEPKLVEALVDKNITFIACGSTYSA 570
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NG--VQLVAC- 352
L+S G LY WG G+LG G SD IP LV NG V VAC
Sbjct: 571 VLSSNGELYTWGRGNYGRLGHG-----------NSDNVL--IPTLVTALNGHMVVHVACG 617
Query: 353 -GHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAV 410
G S TL G + WG +YG+ + P VD + V K+ GG SA
Sbjct: 618 SGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAA 677
Query: 411 LA 412
L
Sbjct: 678 LT 679
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 99/229 (43%), Gaps = 31/229 (13%)
Query: 190 AWGYNEYGQLGRGITCEGLQGPRV-IKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG N+ QLG GL+G ++ + Y++ L + K ++ G VS+ G+
Sbjct: 3263 VWGLNDKDQLG------GLKGSKIKLPVYSEVLSKL----KPIHIAGGSKTLFVVSQEGK 3312
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHSCALTSKGALYA 306
+Y G G+ G+LG L P+ + L IK +A GG H+ ALT G +++
Sbjct: 3313 LYACGEGTNGRLG---LGDDSNVCEPKLIPFLSQYMIKKMAVHSGGKHALALTQDGKIFS 3369
Query: 307 WGGSQAGQLGLGPQTR--SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 364
WG + G+LG G LI + R+I ACG H+ G
Sbjct: 3370 WGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDI------------ACGSGHSAAITSSG 3417
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
++ WG YG+ + + P V VG+ V ++A G + +A
Sbjct: 3418 ELYTWGLGEYGRLGHGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMA 3466
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
I Q+ C E +S +G VY GS Q P+RV + +A
Sbjct: 463 IKQLCCTERALMILSISGNVYMMYYGSETQY-------------PQRVYGFSEKPVTMIA 509
Query: 290 C--GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV---VP 344
G H ALT ++Y+WG G+LG G D + + P LV V
Sbjct: 510 SHSDGTHYLALTQDSSVYSWGNGDGGRLGHG-------------DRVWYDEPKLVEALVD 556
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAA 403
+ +ACG +++ V +G ++ WG +YG+ + S P+ V G V +A
Sbjct: 557 KNITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVHVAC 616
Query: 404 GGGHSAVL 411
G G S L
Sbjct: 617 GSGDSQTL 624
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 71/176 (40%), Gaps = 16/176 (9%)
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
++ VY WGL QLG G K LP L + +A G ++ +G L
Sbjct: 3257 QHSAVYVWGLNDKDQLGGL---KGSKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKL 3313
Query: 305 YAWGGSQAGQLGLGPQTR--SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
YA G G+LGLG + LIP S + + V G H L +
Sbjct: 3314 YACGEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKMA----------VHSGGKHALALTQ 3363
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADACSL 417
DG+I WG G+ + S P ++ + +R +A G GHSA + + L
Sbjct: 3364 DGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGEL 3419
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 74/170 (43%), Gaps = 12/170 (7%)
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G +Y WG GQLG G K LP +L + + G A+T+ G +Y
Sbjct: 4291 SGAIYGWGHNHRGQLGGLE---GAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVY 4347
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
A G AG+LG+G T S ++P T +I + V V G H L +G
Sbjct: 4348 ATGYGAAGRLGIG-GTDSV-MVP----TLLESIQHVFVKKVA--VNSGGKHCLALSSEGH 4399
Query: 366 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADA 414
++ WG G+ + P ++ +G E+ +A GG HSA + A
Sbjct: 4400 VYSWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSA 4449
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 74/176 (42%), Gaps = 31/176 (17%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++Y WG G+ GR G + P L G + I CG + + A
Sbjct: 3467 LTADGSVYSWGDGDFGKLGRGGSD------GCYTPLLIDRLNGLGV--VQIECGAQFSLA 3518
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPREN 135
+ G ++TWG ++ +LG G + + P V+ L+ + V ++ GA HC A
Sbjct: 3519 LTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAV------- 3571
Query: 136 DGTISTSRLWVWGQN------QGSNF----PRLFWGAFTPNTIICQVSCGSVHVVA 181
T +++ WG N GS P L + + +VSCGS H +A
Sbjct: 3572 ---TDTGQVYAWGDNDHGQQGNGSTIVNKKPSLVHE--LDDARVNRVSCGSSHSIA 3622
>gi|444917320|ref|ZP_21237422.1| hypothetical protein D187_10036 [Cystobacter fuscus DSM 2262]
gi|444711215|gb|ELW52165.1| hypothetical protein D187_10036 [Cystobacter fuscus DSM 2262]
Length = 773
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 125/406 (30%), Positives = 175/406 (43%), Gaps = 62/406 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIP-KQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++ WG N GQ G R + +P K L E+ +A H AV +DG
Sbjct: 369 LWGWGDNRFGQLGTGSNLRTVPVPLKDLGSEV------------SVAFNSYHALAVRADG 416
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+L+ WG+N GQLGDGT E R P +V L ++S G + A+ DGT+
Sbjct: 417 SLWAWGSNHRGQLGDGTTETRTEPTRVSGLSDAV--AVSLGNDYSFAL----RADGTV-- 468
Query: 142 SRLWVWGQ----NQGSNFPRLFWGAFTPNTIICQVS----CGSVHVVALSECGLLQAWGY 193
W WG G++ R G T I +S + H +A+ G + AWG
Sbjct: 469 ---WAWGWYGLFADGTSTSRSTPGPVPGLTSITALSVAPNAATGHALAVRVDGTVWAWGD 525
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
N GQ+G G L +V P+L + V+ G HS A+ ++G V+ WG
Sbjct: 526 NTSGQVGNGTKLRQLAPIQV-----------PDLTNVVAVATGSMHSFALRQDGTVWAWG 574
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
GQLG + L+P +V L + +A G H+ AL + G ++AWG + G
Sbjct: 575 DNQFGQLGDGTRLG---RLIPFQVPGLTNVVA--IASGAFHTLALRADGTVWAWGYNWHG 629
Query: 314 QLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWGYN 372
QLG G S + FR P V V +A G HTL DG + WG N
Sbjct: 630 QLGDG------------STSSFRPTPARVEGLTDVSALAAGDWHTLALRTDGTVWAWGRN 677
Query: 373 SYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLADACSL 417
GQ A+ P+ V G L+AG +S A LAD +L
Sbjct: 678 GSGQLADGTVEPRSVPTQVTGVKGRAVALSAGADNSLARLADGTAL 723
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 170/383 (44%), Gaps = 55/383 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +++ WG NH GQ G E + + S + ++ G++++ A
Sbjct: 412 VRADGSLWAWGSNHRGQLGDGTTETRTEPTR----------VSGLSDAVAVSLGNDYSFA 461
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ +DGT++ WG +G DGT R P V L S S++ A A+A D
Sbjct: 462 LRADGTVWAWG--WYGLFADGTSTSRSTPGPVPGLTSITALSVAPNAATGHALAV--RVD 517
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
GT+ W WG N G+ +L T + V+ GS+H AL + G + A
Sbjct: 518 GTV-----WAWGDNTSGQVGNGTKLRQLAPIQVPDLTNVVAVATGSMHSFALRQDGTVWA 572
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG N++GQLG G R+I + P L + ++ G +H+ A+ +G V+
Sbjct: 573 WGDNQFGQLGDGTRLG-----RLIP------FQVPGLTNVVAIASGAFHTLALRADGTVW 621
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
WG GQLG S S P RV L + +A G H+ AL + G ++AWG +
Sbjct: 622 AWGYNWHGQLGDGSTSS--FRPTPARVEGL--TDVSALAAGDWHTLALRTDGTVWAWGRN 677
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGRIHG 368
+GQL G ++ P R++P V V ++ G ++L + DG G
Sbjct: 678 GSGQLADG------TVEP-------RSVPTQVTGVKGRAVALSAGADNSLARLADGTALG 724
Query: 369 WGYNSYGQAANEKSTYAWYPSPV 391
WG N++ + + ST P+ V
Sbjct: 725 WGSNAFSKIGDGVSTVHAAPTRV 747
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 149/377 (39%), Gaps = 68/377 (18%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQL---RIPKQLPPELFGCPAGANSRWLDIACGHEH 73
+ A A++ WGYN GQ G L R+P E +A G H
Sbjct: 54 VDAHGALWAWGYNDFGQLGDGTANAHLTPIRVPGLQDVEA-------------VANGSLH 100
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKH--PEKVKQLQSEFVKSISCGAHCTAAIAE 131
+ A+ DGT++TWG N+FGQLG G E H P+ + L + V +I+ + A+
Sbjct: 101 SLALRRDGTVWTWGDNQFGQLGTG-EPWVTHATPQHLPSLTN--VAAIAASEDHSLAL-- 155
Query: 132 PRENDGTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
DGT+ WVWG N+ N L T I ++ H +AL
Sbjct: 156 --RRDGTV-----WVWGNNRYGQLGGAGNVLLLEPTHLAGLTDIAAIATSPSHRLALRAD 208
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE------YH 239
G + AWG N+ GQLG G T +G + ++ I G H
Sbjct: 209 GTVWAWGSNQTGQLGDGTTES--------RGTVAQVTALTDVVAIAAGGTGSGTINKTGH 260
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT 299
S A+ +G V+ WG GQLG + Q P RV L + ++ S AL
Sbjct: 261 SLALRRDGTVWAWGDNQFGQLGDGTNQ---PRSTPARVQGLTNVV--SISGNSRSSLALR 315
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
G ++AWG G LG T P + GV +A G L
Sbjct: 316 RDGTVWAWGDRMDGPLG---GTSGLQTTPAQVQGL----------RGVMAIAAGGRQALA 362
Query: 360 YMRDGRIHGWGYNSYGQ 376
RDG + GWG N +GQ
Sbjct: 363 LRRDGTLWGWGDNRFGQ 379
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 157/384 (40%), Gaps = 68/384 (17%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++VWG N GQ G G L P L G A IA H A+ +DGT
Sbjct: 161 VWVWGNNRYGQLGGAGNVLLLE-----PTHLAGLTDIAA-----IATSPSHRLALRADGT 210
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG+N+ GQLGDGT E R +V L V +I+ G + I + +
Sbjct: 211 VWAWGSNQTGQLGDGTTESRGTVAQVTALTD--VVAIAAGGTGSGTINKTGHSLALRRDG 268
Query: 143 RLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
+W WG NQ G+N PR T + +S S +AL G + AWG
Sbjct: 269 TVWAWGDNQFGQLGDGTNQPRSTPARVQGLTNVVSISGNSRSSLALRRDGTVWAWGDRMD 328
Query: 197 GQLGRGITCEGLQ-GPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
G LG GLQ P ++G L + ++ G + A+ +G ++ WG
Sbjct: 329 GPLG---GTSGLQTTPAQVQG----------LRGVMAIAAGGRQALALRRDGTLWGWGDN 375
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKD------VACGGVHSCALTSKGALYAWGG 309
GQLG S + +P + +KD VA H+ A+ + G+L+AWG
Sbjct: 376 RFGQLGTGS----NLRTVP--------VPLKDLGSEVSVAFNSYHALAVRADGSLWAWGS 423
Query: 310 SQAGQLGLG--PQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
+ GQLG G + + SD V+ G+ ++ DG +
Sbjct: 424 NHRGQLGDGTTETRTEPTRVSGLSDAV--------------AVSLGNDYSFALRADGTVW 469
Query: 368 GWGYNSYGQAANEKSTYAWYPSPV 391
WG+ YG A+ ST P PV
Sbjct: 470 AWGW--YGLFADGTSTSRSTPGPV 491
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 162/404 (40%), Gaps = 76/404 (18%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLP-PELFGCPAGANSRWLDIACGHEHTAAV 77
A ++ WG N +GQ G E + + + ++ AG GH + A+
Sbjct: 207 ADGTVWAWGSNQTGQLGDGTTESRGTVAQVTALTDVVAIAAGGTGSGTINKTGH--SLAL 264
Query: 78 ASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG 137
DGT++ WG N+FGQLGDGT + R P +V+ L + V SIS + + A+ DG
Sbjct: 265 RRDGTVWAWGDNQFGQLGDGTNQPRSTPARVQGLTN--VVSISGNSRSSLAL----RRDG 318
Query: 138 TISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECGLLQAWG 192
T+ W WG TP + + ++ G +AL G L WG
Sbjct: 319 TV-----WAWGDRMDGPLGGTSGLQTTPAQVQGLRGVMAIAAGGRQALALRRDGTLWGWG 373
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
N +GQLG G + P +K +L V+ YH+ AV +G ++ W
Sbjct: 374 DNRFGQLGTGSNLRTV--PVPLK----------DLGSEVSVAFNSYHALAVRADGSLWAW 421
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG---- 308
G GQLG + ++ + RV L V+ G +S AL + G ++AWG
Sbjct: 422 GSNHRGQLGDGTTETRTEP---TRVSGLSDAVA--VSLGNDYSFALRADGTVWAWGWYGL 476
Query: 309 ---GSQAGQLGLGP-----QTRSFSLIPNESD--------------------------TY 334
G+ + GP + S+ PN + T
Sbjct: 477 FADGTSTSRSTPGPVPGLTSITALSVAPNAATGHALAVRVDGTVWAWGDNTSGQVGNGTK 536
Query: 335 FRNIPILVVPN--GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
R + + VP+ V VA G H+ +DG + WG N +GQ
Sbjct: 537 LRQLAPIQVPDLTNVVAVATGSMHSFALRQDGTVWAWGDNQFGQ 580
>gi|321471075|gb|EFX82049.1| hypothetical protein DAPPUDRAFT_210805 [Daphnia pulex]
Length = 510
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 138/310 (44%), Gaps = 49/310 (15%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC-TAAIAEPREN 135
V D ++ G N G LG G P K++ L + +K ++ G+ A ++ E
Sbjct: 15 VTVDDDVYAMGCNSSGCLGLGDTASALQPRKIESLCKKKIKGLAYGSGLHLLAFSDSGE- 73
Query: 136 DGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
L+ WG N S P L G T+I QV CG+ H +AL+
Sbjct: 74 --------LYTWGYNTYSQLGNGNTNHTLTPSLVSGVLAGKTVI-QVGCGNHHCLALTSE 124
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + AWG N GQ G G T RV G K+ ++CG+ S A+ +
Sbjct: 125 GEVFAWGQNNGGQCGSGTTTGQSVPRRVTSGIGG--------HKVVAIACGQLTSMALLD 176
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G++Y WG G+LG + + + + P RV L +FI + CG H ALT +G LY
Sbjct: 177 DGDLYGWGYNGNGELG---IGNNNNQHNPVRVSNLHKVFITQIVCGFAHCLALTDQGELY 233
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYM- 361
AWG + GQLG G +T S P++V P V++ AC SH M
Sbjct: 234 AWGANSYGQLGTGYKTHHLS-------------PVIVAPELGKAVEIAACHLSHISAAMF 280
Query: 362 RDGRIHGWGY 371
DG+I WG+
Sbjct: 281 HDGKIFMWGH 290
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 109/228 (47%), Gaps = 22/228 (9%)
Query: 177 VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG 236
+H++A S+ G L WGYN Y QLG G T L P ++ G + + QV CG
Sbjct: 63 LHLLAFSDSGELYTWGYNTYSQLGNGNTNHTLT-PSLVSGVLAG-------KTVIQVGCG 114
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHS 295
+H A++ GEV+ WG + GQ C + + +PRRV + + G + +ACG + S
Sbjct: 115 NHHCLALTSEGEVFAWGQNNGGQ---CGSGTTTGQSVPRRVTSGIGGHKVVAIACGQLTS 171
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS 355
AL G LY WG + G+LG+G + + N+ + + + CG +
Sbjct: 172 MALLDDGDLYGWGYNGNGELGIGNNNNQHNPVR------VSNLHKVFITQ----IVCGFA 221
Query: 356 HTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 403
H L G ++ WG NSYGQ T+ P V +G+ ++AA
Sbjct: 222 HCLALTDQGELYAWGANSYGQLGTGYKTHHLSPVIVAPELGKAVEIAA 269
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 112/251 (44%), Gaps = 55/251 (21%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WGYN Q G L P + G AG + + CG+ H A+ S+G
Sbjct: 74 LYTWGYNTYSQLGNGNTNHTLT-----PSLVSGVLAGKTV--IQVGCGNHHCLALTSEGE 126
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ G GT G+ P +V + V +I+CG + A+ + DG
Sbjct: 127 VFAWGQNNGGQCGSGTTTGQSVPRRVTSGIGGHKVVAIACGQLTSMALLD----DG---- 178
Query: 142 SRLWVWGQN-----------------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
L+ WG N + SN ++F I Q+ CG H +AL++
Sbjct: 179 -DLYGWGYNGNGELGIGNNNNQHNPVRVSNLHKVF---------ITQIVCGFAHCLALTD 228
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAA 242
G L AWG N YGQLG G L P ++ APEL K ++ +C H SAA
Sbjct: 229 QGELYAWGANSYGQLGTGYKTHHLS-PVIV---------APELGKAVEIAACHLSHISAA 278
Query: 243 VSENGEVYTWG 253
+ +G+++ WG
Sbjct: 279 MFHDGKIFMWG 289
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 126/320 (39%), Gaps = 51/320 (15%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQL---RIPKQLPPELFGCPAGANS 62
I G V + +Y G N SG G L +I ++ G G+
Sbjct: 4 IFGNMGSEVIMVTVDDDVYAMGCNSSGCLGLGDTASALQPRKIESLCKKKIKGLAYGSGL 63
Query: 63 RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISC 121
H A + G L+TWG N + QLG+G P V L + V + C
Sbjct: 64 ----------HLLAFSDSGELYTWGYNTYSQLGNGNTNHTLTPSLVSGVLAGKTVIQVGC 113
Query: 122 GAHCTAAIAEPRENDGTISTSRLWVWGQNQ----------GSNFPRLFWGAFTPNTIICQ 171
G H A+ E ++ WGQN G + PR + ++
Sbjct: 114 GNHHCLALTSEGE---------VFAWGQNNGGQCGSGTTTGQSVPRRVTSGIGGHKVVA- 163
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
++CG + +AL + G L WGYN G+LG G RV + F IT
Sbjct: 164 IACGQLTSMALLDDGDLYGWGYNGNGELGIGNNNNQHNPVRVSNLHKVF---------IT 214
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVA 289
Q+ CG H A+++ GE+Y WG S GQLG +G K L P V G ++ A
Sbjct: 215 QIVCGFAHCLALTDQGELYAWGANSYGQLG-----TGYKTHHLSPVIVAPELGKAVEIAA 269
Query: 290 CGGVH-SCALTSKGALYAWG 308
C H S A+ G ++ WG
Sbjct: 270 CHLSHISAAMFHDGKIFMWG 289
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 78/174 (44%), Gaps = 23/174 (13%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG-GVHSCALTSK 301
V+ + +VY G S G LG L L PR++ +L IK +A G G+H A +
Sbjct: 15 VTVDDDVYAMGCNSSGCLG---LGDTASALQPRKIESLCKKKIKGLAYGSGLHLLAFSDS 71
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
G LY WG + QLG G + +L P+ + ++ V V CG+ H L
Sbjct: 72 GELYTWGYNTYSQLGNG--NTNHTLTPSL-------VSGVLAGKTVIQVGCGNHHCLALT 122
Query: 362 RDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADAC 415
+G + WG N+ GQ + +T P R++ +G G V+A AC
Sbjct: 123 SEGEVFAWGQNNGGQCGSGTTTGQSVP----------RRVTSGIGGHKVVAIAC 166
>gi|8131930|gb|AAF73141.1|AF148798_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
familiaris]
Length = 683
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/351 (31%), Positives = 171/351 (48%), Gaps = 30/351 (8%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++CG EHTA V + L+ +G+N +GQLG G++ P VK L+ E VK +CG + T
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99
Query: 127 AAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
E + G + +L + + S F + + FT I Q+S GS AL+E
Sbjct: 100 LVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISF--FTSQRKIKQLSAGSNTSAALTE 157
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G L WG N GQ+G +V G + I+ +SCG YHSA V+
Sbjct: 158 DGELFMWGDNSEGQIGLENVTNVCVPQQVTVG-----------KPISWISCGYYHSAFVT 206
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
G++YT+G G+LG + Q +P+ V + G ++ VACGG H+ LT K A+
Sbjct: 207 TEGQLYTFGEPECGKLGLPN-QLLVNHRMPQPVPGIPGKVVQ-VACGGGHTVVLTEK-AV 263
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 364
Y +G Q GQLGLG T F ++ + ++ + +ACG +HT + G
Sbjct: 264 YTFGLGQFGQLGLG--TFLFETSVPKAIEHIKD-------QKISFIACGENHTALITDMG 314
Query: 365 RIHGWGYNSYGQ--AANEKSTYAWYPSPV-DWCVGEVRKLAAGGGHSAVLA 412
++ +G +G+ E ST + P+ ++ V+ ++ GG H+ V A
Sbjct: 315 LMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHTLVFA 365
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 124/284 (43%), Gaps = 51/284 (17%)
Query: 144 LWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
++ +G+ Q N P FW N + +SCG H ++ L +G N +GQLG G
Sbjct: 14 VFTFGKTQFAENIPSKFWFR---NDVPTFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLG 70
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
+ + P +K A + EK+ +CG H+ +E G+VY G + GQLG
Sbjct: 71 -SKSTVSKPTCVK--------ALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLG- 120
Query: 263 CSLQSGDKELLPRRVVALDGIF-----IKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GD E R L F IK ++ G S ALT G L+ WG + GQ+GL
Sbjct: 121 ----LGDTE--ERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGL 174
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQL------VACGHSHTLVYMRDGRIHGWGY 371
N+ + VP V + ++CG+ H+ +G+++ +G
Sbjct: 175 ------------------ENVTNVCVPQQVTVGKPISWISCGYYHSAFVTTEGQLYTFGE 216
Query: 372 NSYGQ--AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLAD 413
G+ N+ P PV G+V ++A GGGH+ VL +
Sbjct: 217 PECGKLGLPNQLLVNHRMPQPVPGIPGKVVQVACGGGHTVVLTE 260
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 103/233 (44%), Gaps = 47/233 (20%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+++WG N GQ G + + +P+Q+ G W I+CG+ H+A V ++G
Sbjct: 161 LFMWGDNSEGQIGLENV-TNVCVPQQV-------TVGKPISW--ISCGYYHSAFVTTEGQ 210
Query: 83 LFTWGANEFGQLGDGTEEGRKH--PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
L+T+G E G+LG + H P+ V + + V+ ++CG T + E
Sbjct: 211 LYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKVVQ-VACGGGHTVVLTE--------- 260
Query: 141 TSRLWVWGQNQGSNFPRLFWGAF-----TPNTI-------ICQVSCGSVHVVALSECGLL 188
++ +G Q F +L G F P I I ++CG H +++ GL+
Sbjct: 261 -KAVYTFGLGQ---FGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLM 316
Query: 189 QAWGYNEYGQLGRGITCEGLQG-PRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
+G +G+LG G+ Q P + + +F+ + VSCG H+
Sbjct: 317 YTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFI--------VQLVSCGGCHT 361
>gi|295789061|ref|NP_001171424.1| X-linked retinitis pigmentosa GTPase regulator isoform 5 [Mus
musculus]
gi|26332729|dbj|BAC30082.1| unnamed protein product [Mus musculus]
Length = 557
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 170/356 (47%), Gaps = 40/356 (11%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++CG EHTA V + L+ +G+N +GQLG G++ P +K L+ E VK +CG + T
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 137
Query: 127 AAIAEP--RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
+ G + +L + + F ++ + FTP I Q+S G+ AL+E
Sbjct: 138 LVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVF--FTPADTIKQLSAGANTSAALTE 195
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G L WG N GQ+G V G + I+ +SCG YHSA V+
Sbjct: 196 DGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVG-----------KPISWISCGYYHSAFVT 244
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELL-----PRRVVALDGIFIKDVACGGVHSCALT 299
+GE+YT+G G+LG ELL P+RV+ + I+ VACGG H+ LT
Sbjct: 245 MDGELYTFGEPENGKLGL------PNELLMNHRSPQRVLGIPERVIQ-VACGGGHTVVLT 297
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
K +YA+G Q GQLGLG +F +E R + + ++CG +HT +
Sbjct: 298 EK-VVYAFGLGQFGQLGLG----TFLFETSEPKIIER-----IKDQKICHISCGENHTAL 347
Query: 360 YMRDGRIHGWGYNSYGQ--AANEKSTYAWYPSPV-DWCVGEVRKLAAGGGHSAVLA 412
G ++ +G +G+ E T ++P+ ++ V+ +A GG H V A
Sbjct: 348 MTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVFA 403
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 125/276 (45%), Gaps = 29/276 (10%)
Query: 141 TSRLWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
T ++ +G+ + N P FW F + IC +SCG H ++ L +G N +GQL
Sbjct: 49 TGAVFTFGKTKFAENIPSKFW--FKNDIPIC-LSCGDEHTAIVTGNNKLYMFGSNNWGQL 105
Query: 200 GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ 259
G G ++ P IK A + EK+ +CG H+ ++ G VY G + GQ
Sbjct: 106 GLGSKAAIIK-PTCIK--------ALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQ 156
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LG + D++ + V IK ++ G S ALT G L+ WG + GQ+GL
Sbjct: 157 LGLG--DTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGL-- 212
Query: 320 QTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA- 378
+ +S IP+E + V + ++CG+ H+ DG ++ +G G+
Sbjct: 213 EDKSNVCIPHE----------VTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGL 262
Query: 379 -NEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLAD 413
NE P V V ++A GGGH+ VL +
Sbjct: 263 PNELLMNHRSPQRVLGIPERVIQVACGGGHTVVLTE 298
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 89/195 (45%), Gaps = 38/195 (19%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+++WG N GQ G + + + IP ++ G W I+CG+ H+A V DG
Sbjct: 199 LFMWGDNSEGQIGLEDKS-NVCIPHEV-------TVGKPISW--ISCGYYHSAFVTMDGE 248
Query: 83 LFTWGANEFGQLGDGTEEGRKH--PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
L+T+G E G+LG E H P++V + E V ++CG T + E
Sbjct: 249 LYTFGEPENGKLGLPNELLMNHRSPQRVLGI-PERVIQVACGGGHTVVLTE--------- 298
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFT-----PNTI-------ICQVSCGSVHVVALSECGLL 188
++ +G Q F +L G F P I IC +SCG H ++E GLL
Sbjct: 299 -KVVYAFGLGQ---FGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLL 354
Query: 189 QAWGYNEYGQLGRGI 203
+G +G+LG G+
Sbjct: 355 YTFGDGRHGKLGLGM 369
>gi|301109553|ref|XP_002903857.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262096860|gb|EEY54912.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 1598
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 117/390 (30%), Positives = 159/390 (40%), Gaps = 88/390 (22%)
Query: 10 TARP-VDNIPAKSAIYVWGYNHSGQTGRKGR------ERQLRIPKQ---------LPPEL 53
T RP +D P VWGY + R LR+ + PP L
Sbjct: 1184 TTRPDIDEGPVPGLALVWGYPLGLSLDEEARISPGTSTLSLRLSTENLSAVRMVSFPPPL 1243
Query: 54 FGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS 113
R + IACG+ HTA + D L+T+G E G+LG GTEE P
Sbjct: 1244 --------RRVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGTEEDCTDP-------- 1287
Query: 114 EFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVS 173
I G + AE E G + VS
Sbjct: 1288 -----IPVGYFTSLIAAEGVEFGG-------------------------------VVDVS 1311
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
CG H + ++ G L +G+ E G+LG G T L RV +L I V
Sbjct: 1312 CGREHTMVVTGNGDLYGFGWGEAGRLGTGETGSSLYPSRV------------DLRNIAAV 1359
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
+CG H+ A++ G V+ +G G G+LG+ S D+EL P V L+ I +A G
Sbjct: 1360 ACGREHTLALTSKGRVFAFGAGFGGRLGNGS--ETDEEL-PFLVEGLEEYSIVAIAAGEC 1416
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--- 350
HSCAL+ G + WG +G LG G TR LIP D + N + + + + +V
Sbjct: 1417 HSCALSRDGEVLTWGFGSSGALGHG--TRDNCLIPTLVDGPWTNPNVETLIHDISVVTSV 1474
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQAANE 380
ACG HTL DG ++GWG + GQ E
Sbjct: 1475 ACGSYHTLAATNDGVLYGWGDAAAGQLGAE 1504
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 105/232 (45%), Gaps = 24/232 (10%)
Query: 165 PNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLD-E 223
P + Q++CG H +++ L +G+ E G+LG G T E P + + + E
Sbjct: 1242 PLRRVVQIACGYRHTALITDDRHLYTFGHGECGRLGHG-TEEDCTDPIPVGYFTSLIAAE 1300
Query: 224 APELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
E + VSCG H+ V+ NG++Y +G G G+LG S L P RV D
Sbjct: 1301 GVEFGGVVDVSCGREHTMVVTGNGDLYGFGWGEAGRLGTGETGSS---LYPSRV---DLR 1354
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
I VACG H+ ALTSKG ++A+G G+LG G +T +P LV
Sbjct: 1355 NIAAVACGREHTLALTSKGRVFAFGAGFGGRLGNGSETDE-------------ELPFLVE 1401
Query: 344 ---PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVD 392
+ +A G H+ RDG + WG+ S G + P+ VD
Sbjct: 1402 GLEEYSIVAIAAGECHSCALSRDGEVLTWGFGSSGALGHGTRDNCLIPTLVD 1453
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 117/252 (46%), Gaps = 33/252 (13%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ACG EHT A+ S G +F +GA G+LG+G+E + P V+ L+ + +I+ G +
Sbjct: 1359 VACGREHTLALTSKGRVFAFGAGFGGRLGNGSETDEELPFLVEGLEEYSIVAIAAGECHS 1418
Query: 127 AAIAEPRENDGTISTSRLWVWGQN----QGSN----FPRLFWGAFT-PN--------TII 169
A++ DG + T W +G + G+ P L G +T PN +++
Sbjct: 1419 CALSR----DGEVLT---WGFGSSGALGHGTRDNCLIPTLVDGPWTNPNVETLIHDISVV 1471
Query: 170 CQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK 229
V+CGS H +A + G+L WG GQLG E L ++ K + P
Sbjct: 1472 TSVACGSYHTLAATNDGVLYGWGDAAAGQLG----AEHLSAQDLVVLSPKEI-RLPTSSG 1526
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
I ++CG + SA S G+++ WG + G ++ +RV L +A
Sbjct: 1527 IRGIACGTFTSAVCSTQGQLFMWGSPAAGNGAPLDVEDAHV----KRVGVLGEFEFSQIA 1582
Query: 290 CGGVHSCALTSK 301
CG H+ A+T K
Sbjct: 1583 CGAYHAVAITRK 1594
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 13/132 (9%)
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP 344
+ +ACG H+ +T LY +G + G+LG G + IP YF + L+
Sbjct: 1246 VVQIACGYRHTALITDDRHLYTFGHGECGRLGHGTEEDCTDPIPV---GYFTS---LIAA 1299
Query: 345 NGVQL-----VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVR 399
GV+ V+CG HT+V +G ++G+G+ G+ ++ + YPS VD + +
Sbjct: 1300 EGVEFGGVVDVSCGREHTMVVTGNGDLYGFGWGEAGRLGTGETGSSLYPSRVD--LRNIA 1357
Query: 400 KLAAGGGHSAVL 411
+A G H+ L
Sbjct: 1358 AVACGREHTLAL 1369
>gi|348534545|ref|XP_003454762.1| PREDICTED: hypothetical protein LOC100691941 [Oreochromis
niloticus]
Length = 1536
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 124/407 (30%), Positives = 187/407 (45%), Gaps = 56/407 (13%)
Query: 15 DNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHT 74
D+IP A++ +G + + +P + + N L IACG EHT
Sbjct: 7 DDIPESGAVFTFGKS--------------KFADNIPSKFWL----KNDIPLRIACGDEHT 48
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPR 133
A + +G LF +G+N +GQLG G++ P VK L+SE V+ ++CG H A+ +
Sbjct: 49 ALITENGKLFMFGSNNWGQLGLGSKVTVNKPTCVKALKSEKVQLVACGRNHTLICTAKGK 108
Query: 134 -ENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
G S +L + + ++F RL + F I ++ GS AL+ G L WG
Sbjct: 109 VYASGGNSEGQLGLGDCEERTSFKRLDF--FDSQGPIKMLAAGSNTSAALTVSGKLFMWG 166
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
N GQ+G G + V G + I+ VSCG YHSA V+ +G +YT+
Sbjct: 167 DNTEGQIGLGKESQVSSPQEVSVG-----------QPISWVSCGYYHSALVTVDGALYTF 215
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIF---IKDVACGGVHSCALTSKGALYAWGG 309
G G+LG G +L RV L ++ VACGG H+ AL ++G +Y +G
Sbjct: 216 GERDSGKLGL-----GTHQLPGHRVPQLVKSIKEPVRQVACGGGHTVAL-AEGNVYTFGL 269
Query: 310 SQAGQLGLGPQTRSF-SLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHG 368
Q GQLG G T F S +P + + + VV CG +HT V DG ++
Sbjct: 270 GQFGQLGHG--TFIFESRVPRLVEHFKKGRACQVV--------CGENHTAVITEDGLLYT 319
Query: 369 WGYNSYGQ--AANEKSTYAWYPSP-VDWCVGEVRKLAAGGGHSAVLA 412
+G +G+ E T + P+ + + V+ GG H VLA
Sbjct: 320 FGDGRHGKLGLGEENFTNQFKPTLCLRFLKYNVQGAMCGGCHMVVLA 366
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 128/274 (46%), Gaps = 31/274 (11%)
Query: 144 LWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
++ +G+++ N P FW N I +++CG H ++E G L +G N +GQLG G
Sbjct: 15 VFTFGKSKFADNIPSKFW---LKNDIPLRIACGDEHTALITENGKLFMFGSNNWGQLGLG 71
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
+ P +K A + EK+ V+CG H+ + G+VY G S GQLG
Sbjct: 72 SKVT-VNKPTCVK--------ALKSEKVQLVACGRNHTLICTAKGKVYASGGNSEGQLG- 121
Query: 263 CSLQSGDKELLPRRVVALDGI-FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQT 321
L ++ +R+ D IK +A G S ALT G L+ WG + GQ+GLG ++
Sbjct: 122 --LGDCEERTSFKRLDFFDSQGPIKMLAAGSNTSAALTVSGKLFMWGDNTEGQIGLGKES 179
Query: 322 RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ--AAN 379
+ S P E + V + V+CG+ H+ + DG ++ +G G+
Sbjct: 180 QVSS--PQE----------VSVGQPISWVSCGYYHSALVTVDGALYTFGERDSGKLGLGT 227
Query: 380 EKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLAD 413
+ P V VR++A GGGH+ LA+
Sbjct: 228 HQLPGHRVPQLVKSIKEPVRQVACGGGHTVALAE 261
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 49/117 (41%), Gaps = 9/117 (7%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A+ +Y +G GQ G + R+P+ + E F R + CG HTA +
Sbjct: 260 AEGNVYTFGLGQFGQLGHGTFIFESRVPRLV--EHF-----KKGRACQVVCGENHTAVIT 312
Query: 79 SDGTLFTWGANEFGQLGDGTEE--GRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
DG L+T+G G+LG G E + P + V+ CG +A PR
Sbjct: 313 EDGLLYTFGDGRHGKLGLGEENFTNQFKPTLCLRFLKYNVQGAMCGGCHMVVLARPR 369
>gi|407399996|gb|EKF28499.1| hypothetical protein MOQ_007751 [Trypanosoma cruzi marinkellei]
Length = 644
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 111/377 (29%), Positives = 173/377 (45%), Gaps = 56/377 (14%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+ +Y WG SG +G G +R L ++ P G R +D+A G ++ A++
Sbjct: 147 RQLLYSWG---SGASGELGTQRFLDCSTPTLAQI--TPFGV--RVVDVALGANYSCALSE 199
Query: 80 DGTLFTWGANEFGQLGDGT-EEGRKHPEK----VKQLQSEFVKSISCGAHCTAAIAEPRE 134
DG ++T+G ++GQLG G+ E +HP+ V Q + + H A A
Sbjct: 200 DGNIYTFGNGDWGQLGLGSARELDEHPDDKSAVVTVPQRIPLFEQNPAVHLAAGYAFAM- 258
Query: 135 NDGTISTSRLWVWGQN---QGSNFPRLFWGAFT----PNTI-------ICQVSCGSVHVV 180
+ ++ WG N Q PR F + P + I Q+ CGS +
Sbjct: 259 --ALTAGHHVYFWGNNNHGQSGLGPRYFDYSLRKVEEPTLVETLEGKRIVQLGCGSFFSL 316
Query: 181 ALSECGLLQAWGYNEYGQLGRG-----------ITCEGLQGPRVIKGYAKFLDEAPELEK 229
AL + G L +WG E LG I E L + + P K
Sbjct: 317 ALGDDGTLYSWGLLECLGLGTTEEVRAAIDDPFIISESLSTEKRTVVLVPQIVHVPTEHK 376
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVV-ALDGIFIK 286
+ +V G++HS ++ GE++TWG+G G+LGH GDKE L+P +V AL G +
Sbjct: 377 LIRVHAGQWHSGVINTAGELFTWGVGYQGRLGH-----GDKEPALVPTKVRGALTGQRVI 431
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
DVACG H+ ALT +GA+Y WG + +GQ G + + + +R + + V G
Sbjct: 432 DVACGSFHTVALTERGAVYCWGDNASGQCGAKSSIDAVT-------SPYRVVNLEFVAGG 484
Query: 347 V-QLVACGHSHTLVYMR 362
V + ++CG HT+V M+
Sbjct: 485 VAKAISCGRQHTVVVMQ 501
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 157/419 (37%), Gaps = 101/419 (24%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG N+ GQ+G R + K P L G R + + CG + A+ DGT
Sbjct: 266 VYFWGNNNHGQSGLGPRYFDYSLRKVEEPTLVETLEG--KRIVQLGCGSFFSLALGDDGT 323
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L++WG E LG TEE R AAI +P ++ST
Sbjct: 324 LYSWGLLECLGLGT-TEEVR------------------------AAIDDPFIISESLSTE 358
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+ V Q + P T + +I +V G H ++ G L WG G+LG G
Sbjct: 359 KRTVVLVPQIVHVP-------TEHKLI-RVHAGQWHSGVINTAGELFTWGVGYQGRLGHG 410
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
L P ++G A +++ V+CG +H+ A++E G VY WG + GQ G
Sbjct: 411 DKEPALV-PTKVRG-------ALTGQRVIDVACGSFHTVALTERGAVYCWGDNASGQCGA 462
Query: 263 CSLQSGDKELLPRRVVALD---GIFIKDVACGGVHS---------------CAL------ 298
S S D P RVV L+ G K ++CG H+ C L
Sbjct: 463 KS--SIDAVTSPYRVVNLEFVAGGVAKAISCGRQHTVVVMQGPQSWCQRSCCKLDHNGKP 520
Query: 299 ---------------TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
T GA + G G++ G R F L+P+ D N
Sbjct: 521 RAPHGQVFTFGETSRTGGGAAVSGGPVICGKMQDGKVYRQFRLVPSLKDLNVIN------ 574
Query: 344 PNGVQLVACGHSHTLVYMRD----GRIHGWGYNSY-GQAANEKSTYAWYPSPVDWCVGE 397
V G HT V+ + + G G + G + S SP DW + E
Sbjct: 575 ------VKSGLHHTFVFAEELSNPMTVAGMGTTAMAGGDLPDCSATQSLTSPRDWAISE 627
>gi|395855000|ref|XP_003799962.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Otolemur
garnettii]
Length = 816
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 113/364 (31%), Positives = 173/364 (47%), Gaps = 31/364 (8%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++CG EH+A V + L+ +G+N +GQLG G++ P +K L+ E VK +CG T
Sbjct: 40 LSCGDEHSAIVTGNNKLYMFGSNNWGQLGLGSKAAVNKPTCIKALKPEKVKFAACGRTHT 99
Query: 127 AAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
E G + +L + ++ F + + FT I Q+S GS AL+E
Sbjct: 100 IISTEGGNVYATGGNNEGQLGLGDTDERDTFHLISF--FTSQHKIKQLSAGSNTSAALTE 157
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G L WG N GQ+G +V G + I+ +SCG YHSA V+
Sbjct: 158 DGQLFMWGDNSEGQIGLKDVTNVCVPHQVTIG-----------KPISWISCGYYHSAFVT 206
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
+GE+YT+G G+LG S Q +P+ V ++ I+ VACGG H+ LT + ++
Sbjct: 207 IDGELYTFGESESGKLGLPS-QLLTNHRIPQLVSSIPDKVIQ-VACGGGHTLVLTEE-SV 263
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 364
YA+G Q GQLGLG T F + Y + I+ ++CG +HT + G
Sbjct: 264 YAFGLGQFGQLGLG--TFIFETSEPKVLEYVKGEKIIS-------ISCGENHTAMITDTG 314
Query: 365 RIHGWGYNSYGQ--AANEKSTYAWYPSPVDWCVGEVRKLAA-GGGHSAVLADA-CSLKEL 420
I+ +G +G+ E T ++P+P + + +L A GG H V A + E
Sbjct: 315 GIYTFGDGRHGKLGLGLENFTNRFFPTPCSVFLKFMVQLVACGGCHMLVFATPQAGMAEE 374
Query: 421 CEFR 424
EF
Sbjct: 375 LEFE 378
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 126/284 (44%), Gaps = 51/284 (17%)
Query: 144 LWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
++ +G+ + N P FW F +T IC +SCG H ++ L +G N +GQLG G
Sbjct: 14 VFTFGKTKFAENIPSKFW--FKSDTPIC-LSCGDEHSAIVTGNNKLYMFGSNNWGQLGLG 70
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
+ P IK A + EK+ +CG H+ +E G VY G + GQLG
Sbjct: 71 SKA-AVNKPTCIK--------ALKPEKVKFAACGRTHTIISTEGGNVYATGGNNEGQLGL 121
Query: 263 CSLQSGDKELLPRRVVALDGIF-----IKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GD + R L F IK ++ G S ALT G L+ WG + GQ+GL
Sbjct: 122 -----GDTD--ERDTFHLISFFTSQHKIKQLSAGSNTSAALTEDGQLFMWGDNSEGQIGL 174
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQL------VACGHSHTLVYMRDGRIHGWGY 371
+++ + VP+ V + ++CG+ H+ DG ++ +G
Sbjct: 175 ------------------KDVTNVCVPHQVTIGKPISWISCGYYHSAFVTIDGELYTFGE 216
Query: 372 NSYGQA--ANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLAD 413
+ G+ ++ T P V +V ++A GGGH+ VL +
Sbjct: 217 SESGKLGLPSQLLTNHRIPQLVSSIPDKVIQVACGGGHTLVLTE 260
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 89/195 (45%), Gaps = 38/195 (19%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+++WG N GQ G K + +P Q+ G P W I+CG+ H+A V DG
Sbjct: 161 LFMWGDNSEGQIGLKDV-TNVCVPHQV---TIGKPIS----W--ISCGYYHSAFVTIDGE 210
Query: 83 LFTWGANEFGQLGDGTEEGRKH--PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
L+T+G +E G+LG ++ H P+ V + + ++ ++CG T + E
Sbjct: 211 LYTFGESESGKLGLPSQLLTNHRIPQLVSSIPDKVIQ-VACGGGHTLVLTE--------- 260
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFT-----PNTI-------ICQVSCGSVHVVALSECGLL 188
++ +G Q F +L G F P + I +SCG H +++ G +
Sbjct: 261 -ESVYAFGLGQ---FGQLGLGTFIFETSEPKVLEYVKGEKIISISCGENHTAMITDTGGI 316
Query: 189 QAWGYNEYGQLGRGI 203
+G +G+LG G+
Sbjct: 317 YTFGDGRHGKLGLGL 331
Score = 38.1 bits (87), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 53/132 (40%), Gaps = 16/132 (12%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
+ ++Y +G GQ G + PK L + + I+CG HTA +
Sbjct: 259 TEESVYAFGLGQFGQLGLGTFIFETSEPKVLE-------YVKGEKIISISCGENHTAMIT 311
Query: 79 SDGTLFTWGANEFGQLGDGTEE--GRKHPEKVKQLQSEFVKSISCG-------AHCTAAI 129
G ++T+G G+LG G E R P V+ ++CG A A +
Sbjct: 312 DTGGIYTFGDGRHGKLGLGLENFTNRFFPTPCSVFLKFMVQLVACGGCHMLVFATPQAGM 371
Query: 130 AEPRENDGTIST 141
AE E + TI +
Sbjct: 372 AEELEFEATIDS 383
>gi|312381821|gb|EFR27472.1| hypothetical protein AND_05798 [Anopheles darlingi]
Length = 5197
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 167/351 (47%), Gaps = 53/351 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G +G+ G G + PKQ+P + + + + G +H A+ DG
Sbjct: 3295 LYACGEGTNGRLGL-GHNNNVPTPKQVP-----ILSQYVVKKVAVHSGGKHAMALTLDGK 3348
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F+WG E G+LG G + P+ ++ L+++ ++ I+CG+ +AAI S+
Sbjct: 3349 VFSWGEGEDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAIT---------SSG 3399
Query: 143 RLWVWGQNQ------GSNFPRLFWGAFT--PNTIICQVSCGS--VHVVALSECGLLQAWG 192
L+ WG + G N +L T + + QV+CGS + L+E GL+ +WG
Sbjct: 3400 ELYTWGLGEYGRLGHGDNCTQLKPKLVTALADHRVVQVACGSRDAQTLCLTEEGLVFSWG 3459
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
++G+LGRG EG P ++ + Q+ CG S A++++GEV+TW
Sbjct: 3460 DGDFGKLGRG-GSEGCSIPHQVERLNGV--------GVMQIECGAQFSLALTKSGEVWTW 3510
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G G +LGH + Q K P + L G + VA G +H A+T G +YAWG +
Sbjct: 3511 GKGDYYRLGHGTDQHVRK---PTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDH 3567
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILVV-PNG--VQLVACGHSHTLVY 360
GQ G G +T P LV+ +G V VACG SH++ +
Sbjct: 3568 GQQGSG-------------NTIVNKKPSLVLGLDGIFVNRVACGSSHSVAW 3605
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 174/417 (41%), Gaps = 82/417 (19%)
Query: 21 SAIYVWGYNHSGQTG-RKGRERQL----RIPKQLPPELFGCPAGANSRWLDIACGHEHTA 75
S + VWG N Q G KG + +L + QL P + IA G +
Sbjct: 3241 SKVLVWGLNDKEQLGGLKGSKVKLPTYSSVLSQLKP-------------IHIAGGSKSLF 3287
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEP 132
V+ DG L+ G G+LG G P++V L VK ++ G H A
Sbjct: 3288 IVSQDGKLYACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTL-- 3345
Query: 133 RENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVAL 182
DG +++ WG+ + P+L T I ++CGS H A+
Sbjct: 3346 ---DG-----KVFSWGEGEDGKLGHGNRLTLEKPKLIETLRTKR--IRDIACGSSHSAAI 3395
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHS 240
+ G L WG EYG+LG G C L+ P+++ A ++ QV+CG + +
Sbjct: 3396 TSSGELYTWGLGEYGRLGHGDNCTQLK-PKLVTALAD--------HRVVQVACGSRDAQT 3446
Query: 241 AAVSENGEVYTWGLGSVGQLGH-----CSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
++E G V++WG G G+LG CS +P +V L+G+ + + CG S
Sbjct: 3447 LCLTEEGLVFSWGDGDFGKLGRGGSEGCS--------IPHQVERLNGVGVMQIECGAQFS 3498
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRN-IPIL-VVPNGVQLVACG 353
ALT G ++ WG +LG G +D + R PI + V VA G
Sbjct: 3499 LALTKSGEVWTWGKGDYYRLGHG------------TDQHVRKPTPIQGLRGKKVIHVAVG 3546
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
H L G+++ WG N +GQ + + PS V G V ++A G HS
Sbjct: 3547 ALHCLAVTDSGQVYAWGDNDHGQQGSGNTIVNKKPSLVLGLDGIFVNRVACGSSHSV 3603
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 131/286 (45%), Gaps = 35/286 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G R+ R P+L +G +DIACG H+A + S G
Sbjct: 4485 VFSWGEGEDGKLGHGNRDSYDR------PKLIEALSGIGV--IDIACGSAHSACITSQGH 4536
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ TWG +G+LG G E + P+ V+ L I+CG+ + +++
Sbjct: 4537 VLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDN------ 4590
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
+W WG R G P I + +V CGS VAL+ G + WG
Sbjct: 4591 -VWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKG 4649
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G T + ++ P+ + A + +KI ++ G H A S+ GEV+TWG
Sbjct: 4650 DYHRLGHGNT-DHVRRPKKVA--------ALQGKKIISIATGSLHCVACSDGGEVFTWGD 4700
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
GQLG ++ + + PR V +L G I V CG H+ AL++
Sbjct: 4701 NDEGQLGDGTVSAIQR---PRLVQSLQGKHIVKVICGSAHTLALST 4743
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 120/262 (45%), Gaps = 31/262 (11%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ G +H A++SDG +F+WG E G+LG G + P+ ++ L V I+CG+ +
Sbjct: 4469 VNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIEALSGIGVIDIACGSAHS 4528
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGS 176
A I S + WG+ + P+L I G
Sbjct: 4529 ACIT---------SQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGD 4579
Query: 177 VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG 236
+ +++ + +WG +YG+LGRG +G + P I+ A +T+V CG
Sbjct: 4580 AQTLCITDDDNVWSWGDGDYGKLGRG-GSDGCKVPMKIESLAGL--------GVTKVECG 4630
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSC 296
S A++ +G VYTWG G +LGH + D P++V AL G I +A G +H
Sbjct: 4631 SQFSVALTRSGSVYTWGKGDYHRLGH---GNTDHVRRPKKVAALQGKKIISIATGSLHCV 4687
Query: 297 ALTSKGALYAWGGSQAGQLGLG 318
A + G ++ WG + GQLG G
Sbjct: 4688 ACSDGGEVFTWGDNDEGQLGDG 4709
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 173/410 (42%), Gaps = 62/410 (15%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S I+ WG+NH GQ G R +++P C A + R + IA G + AV D
Sbjct: 4377 STIFGWGHNHRGQLGGLDGSR-IKMPTP-------CEALSLLRPIQIAGGEQTLYAVTPD 4428
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDG 137
G L+ G G+LG G + P V+ LQ +K ++ G HC A +DG
Sbjct: 4429 GKLYATGYGAGGRLGIGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLAL-----SSDG 4483
Query: 138 TISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
+ + WG+ + P+L I ++CGS H ++ G
Sbjct: 4484 EV-----FSWGEGEDGKLGHGNRDSYDRPKLIEALSGIGVI--DIACGSAHSACITSQGH 4536
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSE 245
+ WG YG+LG G + + LQ P++++ + + ++C G+ + +++
Sbjct: 4537 VLTWGKGRYGRLGHGDSEDQLQ-PKLVEALLGY--------RAIDIACGSGDAQTLCITD 4587
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+ V++WG G G+LG D +P ++ +L G+ + V CG S ALT G++Y
Sbjct: 4588 DDNVWSWGDGDYGKLGR---GGSDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVY 4644
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRD 363
WG +LG G + + R + G ++ +A G H +
Sbjct: 4645 TWGKGDYHRLGHG------------NTDHVRRPKKVAALQGKKIISIATGSLHCVACSDG 4692
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
G + WG N GQ + + P V G+ + K+ G H+ L+
Sbjct: 4693 GEVFTWGDNDEGQLGDGTVSAIQRPRLVQSLQGKHIVKVICGSAHTLALS 4742
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 141/328 (42%), Gaps = 44/328 (13%)
Query: 46 PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHP 105
P P+ N L C H A+ + G +F+WG E G+LG G + P
Sbjct: 614 PDTTAPKPIEGLESVNIVQLAAHCEGRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDIP 673
Query: 106 EKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQ----------NQGSNF 155
++ L V + CG+ +AAI E L+ WG+ ++ +
Sbjct: 674 TRIVALAERQVTGVFCGSSYSAAITAAGE---------LYTWGRGTYGRLGHGNSEDKHL 724
Query: 156 PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIK 215
P + I + CG H + +++ G++ AWG ++G+LG G TC G P I
Sbjct: 725 PTIVQVLKQQRVIHVALGCGDAHSLCVTDTGIVYAWGDGDFGKLGNG-TCNGSSVPVAI- 782
Query: 216 GYAKFLDEAPEL-EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLP 274
E P+ + +V G + S A+ +G VY+WG G G+ + P
Sbjct: 783 -------ELPQCSDGAVKVFSGSHFSVALGRDGTVYSWGKGHGGR---LGHGHSEHTASP 832
Query: 275 RRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTY 334
+ + AL+G I D+A G H ALT+ G LY WG + QL TR ++
Sbjct: 833 KAIQALEGKNIVDLAVGLAHCLALTASGELYGWGRNDFQQLCPPCVTRDPIVL------- 885
Query: 335 FRNIPILVVPNGVQL--VACGHSHTLVY 360
+PIL P +++ +A G + ++V+
Sbjct: 886 ---LPILTTPPTLRIAGMAAGGAQSIVW 910
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 118/259 (45%), Gaps = 24/259 (9%)
Query: 156 PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIK 215
P+ G + N + C HV+AL+ G + +WG E G+LG G T R++
Sbjct: 619 PKPIEGLESVNIVQLAAHCEGRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDIPTRIV- 677
Query: 216 GYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPR 275
A ++T V CG +SAA++ GE+YTWG G+ G+LGH + S DK LP
Sbjct: 678 --------ALAERQVTGVFCGSSYSAAITAAGELYTWGRGTYGRLGHGN--SEDKH-LPT 726
Query: 276 RVVALDGIFIKDVA--CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDT 333
V L + VA CG HS +T G +YAWG G+LG G T + S +P
Sbjct: 727 IVQVLKQQRVIHVALGCGDAHSLCVTDTGIVYAWGDGDFGKLGNG--TCNGSSVPVA--- 781
Query: 334 YFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDW 393
I + +G V G ++ RDG ++ WG G+ + S + P +
Sbjct: 782 ----IELPQCSDGAVKVFSGSHFSVALGRDGTVYSWGKGHGGRLGHGHSEHTASPKAIQA 837
Query: 394 CVGE-VRKLAAGGGHSAVL 411
G+ + LA G H L
Sbjct: 838 LEGKNIVDLAVGLAHCLAL 856
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 109/239 (45%), Gaps = 42/239 (17%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHE--HT 74
I + +Y WG G+ G QL+ P+L A A+ R + +ACG T
Sbjct: 3395 ITSSGELYTWGLGEYGRLGHGDNCTQLK------PKLV--TALADHRVVQVACGSRDAQT 3446
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
+ +G +F+WG +FG+LG G EG P +V++L V I CGA + A+ + E
Sbjct: 3447 LCLTEEGLVFSWGDGDFGKLGRGGSEGCSIPHQVERLNGVGVMQIECGAQFSLALTKSGE 3506
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALS 183
+W WG+ ++ RL G P I + V+ G++H +A++
Sbjct: 3507 ---------VWTWGKG---DYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVT 3554
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
+ G + AWG N++GQ G G T + P ++ G + +V+CG HS A
Sbjct: 3555 DSGQVYAWGDNDHGQQGSGNTIVN-KKPSLVLGLDGIF--------VNRVACGSSHSVA 3604
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 117/250 (46%), Gaps = 23/250 (9%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
Q++ G + A++ G L A GY G+LG G T + + P +++ + ++K+
Sbjct: 4414 QIAGGEQTLYAVTPDGKLYATGYGAGGRLGIGGT-DSVTTPTLVESLQHVM-----IKKV 4467
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
V+ G H A+S +GEV++WG G G+LGH + S D+ P+ + AL GI + D+AC
Sbjct: 4468 A-VNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDR---PKLIEALSGIGVIDIAC 4523
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
G HS +TS+G + WG + G+LG G E+ +R I I
Sbjct: 4524 GSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDI---------- 4573
Query: 351 AC--GHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGH 407
AC G + TL D + WG YG+ S P ++ G V K+ G
Sbjct: 4574 ACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVTKVECGSQF 4633
Query: 408 SAVLADACSL 417
S L + S+
Sbjct: 4634 SVALTRSGSV 4643
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 31/179 (17%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ GR G + ++P ++ + A + CG + + A+ G+
Sbjct: 4591 VWSWGDGDYGKLGRGGSD-GCKVPMKIE-------SLAGLGVTKVECGSQFSVALTRSGS 4642
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIST 141
++TWG ++ +LG G + + P+KV LQ + + SI+ G+ HC A +DG
Sbjct: 4643 VYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVAC------SDG---- 4692
Query: 142 SRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
++ WG N PRL + I +V CGS H +ALS L +A
Sbjct: 4693 GEVFTWGDNDEGQLGDGTVSAIQRPRLVQSLQGKH--IVKVICGSAHTLALSTYQLSEA 4749
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%)
Query: 63 RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG 122
+ + +A G H AV G ++ WG N+ GQ G G K P V L FV ++CG
Sbjct: 3539 KVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTIVNKKPSLVLGLDGIFVNRVACG 3598
Query: 123 AHCTAAIAEPR 133
+ + A + P+
Sbjct: 3599 SSHSVAWSLPQ 3609
>gi|321474724|gb|EFX85688.1| hypothetical protein DAPPUDRAFT_98215 [Daphnia pulex]
Length = 1052
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 150/339 (44%), Gaps = 46/339 (13%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
+ + CG HT V DG LF++G N++GQLG R P V L++ + ++CGA
Sbjct: 37 VQVGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTRAEP--VDGLEAHNITQVACGAQ 94
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSNF-----------PRLFWGAFTPNTIICQVS 173
T A E E ++ WG N P++ T + Q++
Sbjct: 95 HTLAQNEWGE---------VFAWGSNSNGQLGLNVEESMMPTPKMVKSLATKQVV--QIA 143
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
CG H +AL+ G + WG N +GQLG G + P ++ K L P I+ +
Sbjct: 144 CGRSHSMALTNVGEIYCWGSNSHGQLGLGSSGTPETKPCLV----KLLQGIP----ISHI 195
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
SCG S AV+ +G VY WG S GQLG L P ++ +L + + CG
Sbjct: 196 SCGADFSFAVTPSGAVYGWGKNSFGQLG---LGDTTDRPQPTQLKSLRFQRVTYIRCGMD 252
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG 353
H+ ALT G ++ +G GQ LG T + ++P + + ++ V + CG
Sbjct: 253 HTAALTRDGGVFTFGAGMYGQ--LGHCTSANEMLPRKV--------LELMGTTVTQICCG 302
Query: 354 HSHTLVYM-RDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
HTL ++ GRI+ +G GQ + + P V
Sbjct: 303 RCHTLAFVPSKGRIYAFGLGGSGQLGTKSTANVNSPQLV 341
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/246 (34%), Positives = 117/246 (47%), Gaps = 31/246 (12%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I QV+CG+ H +A +E G + AWG N GQLG + + P+++K A +
Sbjct: 86 ITQVACGAQHTLAQNEWGEVFAWGSNSNGQLGLNVEESMMPTPKMVKSLAT--------K 137
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
++ Q++CG HS A++ GE+Y WG S GQLG S SG E P V L GI I +
Sbjct: 138 QVVQIACGRSHSMALTNVGEIYCWGSNSHGQLGLGS--SGTPETKPCLVKLLQGIPISHI 195
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLG-----PQTRSFSLIPNESDTYFRNIPILVV 343
+CG S A+T GA+Y WG + GQLGLG PQ + + TY R
Sbjct: 196 SCGADFSFAVTPSGAVYGWGKNSFGQLGLGDTTDRPQPTQLKSLRFQRVTYIR------- 248
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLA 402
CG HT RDG + +G YGQ + S P V +G V ++
Sbjct: 249 --------CGMDHTAALTRDGGVFTFGAGMYGQLGHCTSANEMLPRKVLELMGTTVTQIC 300
Query: 403 AGGGHS 408
G H+
Sbjct: 301 CGRCHT 306
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 85/200 (42%), Gaps = 20/200 (10%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
IY WG N GQ G G L L G P I+CG + + AV G
Sbjct: 158 IYCWGSNSHGQLGL-GSSGTPETKPCLVKLLQGIPIS------HISCGADFSFAVTPSGA 210
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG N FGQLG G R P ++K L+ + V I CG TAA+ DG + T
Sbjct: 211 VYGWGKNSFGQLGLGDTTDRPQPTQLKSLRFQRVTYIRCGMDHTAALTR----DGGVFTF 266
Query: 143 RLWVWGQ-----NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC-GLLQAWGYNEY 196
++GQ + PR T + Q+ CG H +A G + A+G
Sbjct: 267 GAGMYGQLGHCTSANEMLPRKVLELM--GTTVTQICCGRCHTLAFVPSKGRIYAFGLGGS 324
Query: 197 GQLGRGITCEGLQGPRVIKG 216
GQLG T + P+++ G
Sbjct: 325 GQLGTKSTA-NVNSPQLVIG 343
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 50/112 (44%), Gaps = 8/112 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG N GQ G G P QL F R I CG +HTAA+ DG
Sbjct: 210 AVYGWGKNSFGQLGL-GDTTDRPQPTQLKSLRF-------QRVTYIRCGMDHTAALTRDG 261
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
+FT+GA +GQLG T P KV +L V I CG T A +
Sbjct: 262 GVFTFGAGMYGQLGHCTSANEMLPRKVLELMGTTVTQICCGRCHTLAFVPSK 313
>gi|325186780|emb|CCA21326.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 954
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 156/340 (45%), Gaps = 25/340 (7%)
Query: 48 QLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEK 107
QL EL A + IACG +H+ A+ S G +++WG+ E G+LG G R P K
Sbjct: 282 QLVKELTLEKALHRRPIIHIACGAKHSVALTSAGEVYSWGSGEDGRLGHGEMRDRNVPRK 341
Query: 108 VKQLQSEFVKSISCGAHCTAAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLF--WGAF 163
+ L ++ +SCG TA +++ G RL + G + + P+ WG F
Sbjct: 342 IMALLRHRIEYVSCGGSHTAVVSDQNLVFTFGRGRNGRLGL-GDTKCHDTPQEVPTWG-F 399
Query: 164 TPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDE 223
II +V CG +ALS G + +WG GQ G G + P +I+ K LD
Sbjct: 400 RKQRII-KVVCGWNFTIALSLEGRVFSWGKQSEGQCGLGFCDQDELSPCLIE---KLLDN 455
Query: 224 APELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
+I V+CG HS A++ EV +WGLG GQLG + E + + + A +G
Sbjct: 456 -----RIVDVACGYTHSLALTSQHEVLSWGLGEYGQLGRGIVYQPSPESIDQSLFACEGG 510
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
+ + CG HS LYAWG + G GLG IP +D +F NI VV
Sbjct: 511 HPQRIYCGAFHSIITAGSKILYAWGLNSYGACGLGHTLNRD--IPERND-FFANIDTDVV 567
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKST 383
+ CGH +T+ D ++ +S+G S+
Sbjct: 568 ------LCCGHKYTIALEVD-KVPSVSADSFGNTFENASS 600
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 123/243 (50%), Gaps = 28/243 (11%)
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
+R+++WG+ G + TP + I +++CG H++ LS G + + +
Sbjct: 211 ARVFLWGRPPGWSHTN---SLLTPQKVDVLPGQSIAEIACGGNHILYLSSAGDVYS---S 264
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
E + LQ P+++K L++A I ++CG HS A++ GEVY+WG
Sbjct: 265 EDHAISTTEPTNMLQTPQLVKELT--LEKALHRRPIIHIACGAKHSVALTSAGEVYSWGS 322
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
G G+LGH ++ + +PR+++AL I+ V+CGG H+ ++ + ++ +G + G+
Sbjct: 323 GEDGRLGHGEMRDRN---VPRKIMALLRHRIEYVSCGGSHTAVVSDQNLVFTFGRGRNGR 379
Query: 315 LGLGPQTRSFSLIPNESDTY-FRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNS 373
LGLG T+ P E T+ FR I+ V CG + T+ +GR+ WG S
Sbjct: 380 LGLG-DTKCHD-TPQEVPTWGFRKQRIIK-------VVCGWNFTIALSLEGRVFSWGKQS 430
Query: 374 YGQ 376
GQ
Sbjct: 431 EGQ 433
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 132/319 (41%), Gaps = 34/319 (10%)
Query: 105 PEKVKQLQSEFVKSISCGAHCTAAIAEP----RENDGTISTSRLWVWGQNQGSNFPRLFW 160
P+KV L + + I+CG + ++ D IST+ Q
Sbjct: 231 PQKVDVLPGQSIAEIACGGNHILYLSSAGDVYSSEDHAISTTEPTNMLQTPQLVKELTLE 290
Query: 161 GAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF 220
A II ++CG+ H VAL+ G + +WG E G+LG G PR I +
Sbjct: 291 KALHRRPII-HIACGAKHSVALTSAGEVYSWGSGEDGRLGHG-EMRDRNVPRKIMALLR- 347
Query: 221 LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA- 279
+I VSCG H+A VS+ V+T+G G G+LG + D P+ V
Sbjct: 348 -------HRIEYVSCGGSHTAVVSDQNLVFTFGRGRNGRLGLGDTKCHDT---PQEVPTW 397
Query: 280 -LDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
I V CG + AL+ +G +++WG GQ GLG F + D +
Sbjct: 398 GFRKQRIIKVVCGWNFTIALSLEGRVFSWGKQSEGQCGLG-----FC----DQDELSPCL 448
Query: 339 PILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV--- 395
++ N + VACG++H+L + WG YGQ Y P +D +
Sbjct: 449 IEKLLDNRIVDVACGYTHSLALTSQHEVLSWGLGEYGQLG-RGIVYQPSPESIDQSLFAC 507
Query: 396 --GEVRKLAAGGGHSAVLA 412
G +++ G HS + A
Sbjct: 508 EGGHPQRIYCGAFHSIITA 526
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 84/200 (42%), Gaps = 27/200 (13%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ ++ ++ +G +G+ G G + P+++P F R + + CG T A
Sbjct: 363 VSDQNLVFTFGRGRNGRLG-LGDTKCHDTPQEVPTWGF-----RKQRIIKVVCGWNFTIA 416
Query: 77 VASDGTLFTWGANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
++ +G +F+WG GQ G G ++ P +++L + ++CG + A+ E
Sbjct: 417 LSLEGRVFSWGKQSEGQCGLGFCDQDELSPCLIEKLLDNRIVDVACGYTHSLALTSQHE- 475
Query: 136 DGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-----ICQ------VSCGSVHVVALSE 184
+ WG + R +P +I C+ + CG+ H + +
Sbjct: 476 --------VLSWGLGEYGQLGRGIVYQPSPESIDQSLFACEGGHPQRIYCGAFHSIITAG 527
Query: 185 CGLLQAWGYNEYGQLGRGIT 204
+L AWG N YG G G T
Sbjct: 528 SKILYAWGLNSYGACGLGHT 547
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 73/178 (41%), Gaps = 40/178 (22%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG GQ G ++ +L P L ++R +D+ACG+ H+ A+ S
Sbjct: 423 VFSWGKQSEGQCGLGFCDQ-----DELSPCLI--EKLLDNRIVDVACGYTHSLALTSQHE 475
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFV------KSISCGAHCTAAIAEPREND 136
+ +WG E+GQLG G + PE + QS F + I CGA + A
Sbjct: 476 VLSWGLGEYGQLGRGIVY-QPSPESID--QSLFACEGGHPQRIYCGAFHSIITA------ 526
Query: 137 GTISTSRLWVWGQNQ----------GSNFPRL--FWGAFTPNTIICQVSCGSVHVVAL 182
+ L+ WG N + P F+ + ++C CG + +AL
Sbjct: 527 ---GSKILYAWGLNSYGACGLGHTLNRDIPERNDFFANIDTDVVLC---CGHKYTIAL 578
>gi|196005109|ref|XP_002112421.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
gi|190584462|gb|EDV24531.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
Length = 4625
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 183/414 (44%), Gaps = 62/414 (14%)
Query: 14 VDNIPAKSAIYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHE 72
+DN S ++VWG N GQ G KG + + P E+ A R + IA G +
Sbjct: 2862 IDNTDIDSRVFVWGLNDKGQLGGCKGSK------VKSPTEMKNIAA---LRPVSIAGGSK 2912
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
V DG ++ G G+LG G E P ++ L FVK ++ ++
Sbjct: 2913 TVFIVTYDGKVYVSGEGANGRLGLGNTENISIPVQLDTLNMHFVKKVTVHPGGRHSLCIT 2972
Query: 133 RENDGTISTSRLWVWGQ------NQGSNFPRLFWGAF--TPNTIICQVSCGSVHVVALSE 184
RE +++ WG+ G RL + +I +++CGS H A++
Sbjct: 2973 RE-------GKVFSWGEGIDGKLGHGDVTSRLSPTLIEALESKLIVEIACGSSHSAAVTA 3025
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAA 242
G L WG +YG+LG G + L P+ +K + K+ ++CG + + A
Sbjct: 3026 DGELYTWGLGDYGRLGHG-DSKTLHIPKQVKALQDY--------KVIDIACGSRDAQTLA 3076
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
+++N V++WG G G+LG + + +P+++ AL G + +ACG S AL++ G
Sbjct: 3077 LTDNNCVWSWGDGDFGKLGRGGSEGCN---IPQKIDALCGRDVCRIACGAQFSLALSTTG 3133
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLV 359
++ WG +LG G +D+++R+ ++ P + +A G H L
Sbjct: 3134 KVWTWGKGDYYRLGHG------------NDSHYRSPQLIEGPLKKKRITEIAVGALHCLA 3181
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-----VRKLAAGGGHS 408
G ++ WG N +GQ N +T P C+GE + +A G HS
Sbjct: 3182 VTDTGEVYSWGDNDHGQQGNGNTTVNKRPQ---ICLGELDGVKISHIACGSSHS 3232
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 141/294 (47%), Gaps = 43/294 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I + ++ WG G+ G + +L P L A + ++IACG H+AA
Sbjct: 2971 ITREGKVFSWGEGIDGKLGHGD------VTSRLSPTLI--EALESKLIVEIACGSSHSAA 3022
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V +DG L+TWG ++G+LG G + P++VK LQ V I+CG+ +A N
Sbjct: 3023 VTADGELYTWGLGDYGRLGHGDSKTLHIPKQVKALQDYKVIDIACGSRDAQTLALTDNN- 3081
Query: 137 GTISTSRLWVWGQ----------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
+W WG ++G N P+ + +C+++CG+ +ALS G
Sbjct: 3082 ------CVWSWGDGDFGKLGRGGSEGCNIPQKIDALCGRD--VCRIACGAQFSLALSTTG 3133
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ WG +Y +LG G + P++I+G K ++IT+++ G H AV++
Sbjct: 3134 KVWTWGKGDYYRLGHG-NDSHYRSPQLIEGPLK-------KKRITEIAVGALHCLAVTDT 3185
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV---ALDGIFIKDVACGGVHSCA 297
GEVY+WG GQ G+ G+ + R + LDG+ I +ACG HS A
Sbjct: 3186 GEVYSWGDNDHGQQGN-----GNTTVNKRPQICLGELDGVKISHIACGSSHSIA 3234
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 142/314 (45%), Gaps = 45/314 (14%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
L + G H + S+ +F+WG E G+LG G + + P K++ L + + ISCG+
Sbjct: 3860 LSVHSGGRHAMVLTSNFEVFSWGDGEDGKLGHGDKLSSETPRKIEALLGKQIVHISCGSS 3919
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSC 174
+AAI S L+ WG+ + P+L + I
Sbjct: 3920 HSAAIT---------SKGELYTWGKGRYGRLGHGDGDDCLKPKLLEALKSYKVIDVACGS 3970
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G +A+++ + +WG +YG+LGRG +G + P I+ + +V
Sbjct: 3971 GDAQTLAITDDDCVWSWGDGDYGKLGRG-GSDGCKKPLRIESLIGM--------AVCKVE 4021
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVH 294
CG S A+++NG++YTWG G +LGH + D PR+V L G I VA G +H
Sbjct: 4022 CGSQFSVALTKNGDLYTWGKGDYYRLGH---GTNDHVRRPRKVACLQGKQIVTVAAGSLH 4078
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VAC 352
A T G ++ WG + GQLG G + + IP + ++ V V+L V C
Sbjct: 4079 CVACTDAGEVFTWGDNDEGQLGNG----TLNPIPEPT--------LVTVLENVKLNRVGC 4126
Query: 353 GHSHTLVYMRDGRI 366
G +H+ + + I
Sbjct: 4127 GSAHSFAWSTEAPI 4140
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 133/295 (45%), Gaps = 46/295 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R+ + K+L N + IACG ++AAV S+G
Sbjct: 534 VYSWGSGDGGRLGHGDIRREPELVKEL----------VNKKITQIACGSTYSAAVTSNGE 583
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG---AHCTAAIAEPRENDGTI 139
L+TWG +G+LG G E R P V L V ++CG AH A + DG +
Sbjct: 584 LYTWGRGSYGRLGHGNSEDRLLPTLVAGLSGSHVVDVACGSGDAHTLAI-----DKDGIV 638
Query: 140 STSRLWVWGQNQ-------GSN---FPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQ 189
W WG GS+ P++ N I V CGS VAL + G +
Sbjct: 639 -----WSWGDGDYGKLGRGGSDCCKVPKVVETLKHHNKYIVNVLCGSQFSVALGKDGTVW 693
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
WG ++ +LG G T + ++ P++++G + I ++ G H A+++N ++
Sbjct: 694 TWGKSDGYRLGHG-TLDHVRYPKMVEGLINY--------HIVDIAVGPSHCLALTDNCQI 744
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
+TWG + +L S + + P + A++ FI VACG + TS G L
Sbjct: 745 FTWG----SDVQKYALSSDNYNMEPTCISAINKEFIAGVACGPAQNFLWTSGGKL 795
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 127/249 (51%), Gaps = 35/249 (14%)
Query: 72 EHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
EH A++SDG +++WG+ + G+LG G + R+ PE VK+L ++ + I+CG+ +AA+
Sbjct: 523 EHYLALSSDGCVYSWGSGDGGRLGHG--DIRREPELVKELVNKKITQIACGSTYSAAVT- 579
Query: 132 PRENDGTISTSRLWVWGQ------NQGSNFPRLF--WGAFTPNTIICQVSCGS--VHVVA 181
S L+ WG+ G++ RL A + + V+CGS H +A
Sbjct: 580 --------SNGELYTWGRGSYGRLGHGNSEDRLLPTLVAGLSGSHVVDVACGSGDAHTLA 631
Query: 182 LSECGLLQAWGYNEYGQLGRGIT--CEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
+ + G++ +WG +YG+LGRG + C+ + +K + K+ I V CG
Sbjct: 632 IDKDGIVWSWGDGDYGKLGRGGSDCCKVPKVVETLKHHNKY---------IVNVLCGSQF 682
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT 299
S A+ ++G V+TWG +LGH +L D P+ V L I D+A G H ALT
Sbjct: 683 SVALGKDGTVWTWGKSDGYRLGHGTL---DHVRYPKMVEGLINYHIVDIAVGPSHCLALT 739
Query: 300 SKGALYAWG 308
++ WG
Sbjct: 740 DNCQIFTWG 748
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 117/243 (48%), Gaps = 25/243 (10%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H +ALS G + +WG + G+LG G + + P ++K +KITQ++CG
Sbjct: 524 HYLALSSDGCVYSWGSGDGGRLGHG---DIRREPELVKELVN--------KKITQIACGS 572
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHS 295
+SAAV+ NGE+YTWG GS G+LGH + + LLP V L G + DVACG H+
Sbjct: 573 TYSAAVTSNGELYTWGRGSYGRLGH---GNSEDRLLPTLVAGLSGSHVVDVACGSGDAHT 629
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS 355
A+ G +++WG G+LG G +P +T + +V V CG
Sbjct: 630 LAIDKDGIVWSWGDGDYGKLGRGGS--DCCKVPKVVETLKHHNKYIVN------VLCGSQ 681
Query: 356 HTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADA 414
++ +DG + WG + + + + YP V+ + + +A G H L D
Sbjct: 682 FSVALGKDGTVWTWGKSDGYRLGHGTLDHVRYPKMVEGLINYHIVDIAVGPSHCLALTDN 741
Query: 415 CSL 417
C +
Sbjct: 742 CQI 744
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 150/336 (44%), Gaps = 50/336 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G G + P+++ L + + I+CG H+AA+ S G
Sbjct: 3878 VFSWGDGEDGKLGH-GDKLSSETPRKIEALL-------GKQIVHISCGSSHSAAITSKGE 3929
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG G + P+ ++ L+S V ++CG+ +A ++
Sbjct: 3930 LYTWGKGRYGRLGHGDGDDCLKPKLLEALKSYKVIDVACGSGDAQTLAITDDD------- 3982
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
+W WG R G P I +C+V CGS VAL++ G L WG
Sbjct: 3983 CVWSWGDGDYGKLGRGGSDGCKKPLRIESLIGMAVCKVECGSQFSVALTKNGDLYTWGKG 4042
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G T + ++ PR + + ++I V+ G H A ++ GEV+TWG
Sbjct: 4043 DYYRLGHG-TNDHVRRPRKVACL--------QGKQIVTVAAGSLHCVACTDAGEVFTWGD 4093
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG+ +L + P V L+ + + V CG HS +AW
Sbjct: 4094 NDEGQLGNGTLNPIPE---PTLVTVLENVKLNRVGCGSAHS---------FAWSTEAPID 4141
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
+G P IP E + + ++P+ + N + L+
Sbjct: 4142 IGYMPNQ-----IPVEFN-HLHHLPLPALRNRLILL 4171
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 158/360 (43%), Gaps = 69/360 (19%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGH---EHTAAVAS 79
+YV G +G+ G G + IP QL N ++ H H+ +
Sbjct: 2923 VYVSGEGANGRLGL-GNTENISIPVQLDT--------LNMHFVKKVTVHPGGRHSLCITR 2973
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
+G +F+WG G+LG G R P ++ L+S+ + I+CG+ +AA+ E
Sbjct: 2974 EGKVFSWGEGIDGKLGHGDVTSRLSPTLIEALESKLIVEIACGSSHSAAVTADGE----- 3028
Query: 140 STSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGS--VHVVALSECG 186
L+ WG ++ RL G P + + ++CGS +AL++
Sbjct: 3029 ----LYTWGL---GDYGRLGHGDSKTLHIPKQVKALQDYKVIDIACGSRDAQTLALTDNN 3081
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ +WG ++G+LGRG EG P+ I + +++CG S A+S
Sbjct: 3082 CVWSWGDGDFGKLGRG-GSEGCNIPQKIDALCG--------RDVCRIACGAQFSLALSTT 3132
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV--ALDGIFIKDVACGGVHSCALTSKGAL 304
G+V+TWG G +LGH D +++ L I ++A G +H A+T G +
Sbjct: 3133 GKVWTWGKGDYYRLGH----GNDSHYRSPQLIEGPLKKKRITEIAVGALHCLAVTDTGEV 3188
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV--PNGVQL--VACGHSHTLVY 360
Y+WG + GQ G G +T P + + +GV++ +ACG SH++ +
Sbjct: 3189 YSWGDNDHGQQGNG-------------NTTVNKRPQICLGELDGVKISHIACGSSHSIAW 3235
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 167/402 (41%), Gaps = 59/402 (14%)
Query: 23 IYVWGYNHSGQT-GRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
YVWG+NH GQ G +G + + + + L R +A G + + S+G
Sbjct: 3772 FYVWGHNHRGQLGGVQGTKVKSPVINDIIAAL---------RPTAVAGGEQTLFILTSEG 3822
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
++ G G+LG G + P ++ LQ ++ +S + A+ S
Sbjct: 3823 KVYASGLGGSGRLGIGRSDNIVTPVIIEPLQHLKIEKLSVHSGGRHAMV-------LTSN 3875
Query: 142 SRLWVWGQNQGSNF---PRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG + +L + TP I I +SCGS H A++ G L W
Sbjct: 3876 FEVFSWGDGEDGKLGHGDKL--SSETPRKIEALLGKQIVHISCGSSHSAAITSKGELYTW 3933
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSENGEV 249
G YG+LG G + L+ P++++ + K+ V+C G+ + A++++ V
Sbjct: 3934 GKGRYGRLGHGDGDDCLK-PKLLEALKSY--------KVIDVACGSGDAQTLAITDDDCV 3984
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
++WG G G+LG K P R+ +L G+ + V CG S ALT G LY WG
Sbjct: 3985 WSWGDGDYGKLGRGGSDGCKK---PLRIESLIGMAVCKVECGSQFSVALTKNGDLYTWGK 4041
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGRIH 367
+LG G ++ + R + G Q+ VA G H + G +
Sbjct: 4042 GDYYRLGHG------------TNDHVRRPRKVACLQGKQIVTVAAGSLHCVACTDAGEVF 4089
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
WG N GQ N T P P V E KL G SA
Sbjct: 4090 TWGDNDEGQLGN--GTLNPIPEPTLVTVLENVKLNRVGCGSA 4129
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 97/213 (45%), Gaps = 40/213 (18%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I Q+ C S +++AL+ G + + YN CE P ++ +++
Sbjct: 471 IKQIMCSSDNIIALTNNGRVYSLAYNA--------RCEA---PVLLDSLIDI-----KIK 514
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
KI GE H A+S +G VY+WG G G+LGH GD P V L I +
Sbjct: 515 KIAANVEGE-HYLALSSDGCVYSWGSGDGGRLGH-----GDIRREPELVKELVNKKITQI 568
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV---PN 345
ACG +S A+TS G LY WG G+LG G N D R +P LV +
Sbjct: 569 ACGSTYSAAVTSNGELYTWGRGSYGRLGHG----------NSED---RLLPTLVAGLSGS 615
Query: 346 GVQLVAC--GHSHTLVYMRDGRIHGWGYNSYGQ 376
V VAC G +HTL +DG + WG YG+
Sbjct: 616 HVVDVACGSGDAHTLAIDKDGIVWSWGDGDYGK 648
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 88/190 (46%), Gaps = 17/190 (8%)
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFI 285
++EK++ V G H+ ++ N EV++WG G G+LGH S + PR++ AL G I
Sbjct: 3856 KIEKLS-VHSGGRHAMVLTSNFEVFSWGDGEDGKLGHGDKLSSET---PRKIEALLGKQI 3911
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
++CG HS A+TSKG LY WG + G+LG G E+ ++ I
Sbjct: 3912 VHISCGSSHSAAITSKGELYTWGKGRYGRLGHGDGDDCLKPKLLEALKSYKVID------ 3965
Query: 346 GVQLVAC--GHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLA 402
VAC G + TL D + WG YG+ S P ++ +G V K+
Sbjct: 3966 ----VACGSGDAQTLAITDDDCVWSWGDGDYGKLGRGGSDGCKKPLRIESLIGMAVCKVE 4021
Query: 403 AGGGHSAVLA 412
G S L
Sbjct: 4022 CGSQFSVALT 4031
>gi|309792077|ref|ZP_07686551.1| regulator of chromosome condensation RCC1 [Oscillochloris
trichoides DG-6]
gi|308225884|gb|EFO79638.1| regulator of chromosome condensation RCC1 [Oscillochloris
trichoides DG6]
Length = 778
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 116/412 (28%), Positives = 175/412 (42%), Gaps = 69/412 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + WG N SGQ G G Q R P Q+ AG +S IA G HT A
Sbjct: 122 LTTSGGVSCWGNNESGQLG-NGITIQRRTPVQV--------AGLSSGVAAIAAGEYHTCA 172
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ +DG + WG+N +GQLGDGT R P +V L S + G+H A
Sbjct: 173 LTTDGAVTCWGSNGYGQLGDGTTTQRSTPVQVAGLSSGVTAITAGGSHTCA-----LTTG 227
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTI------ICQVSCGSVHVVALSE 184
G ++ WG+N G+ R TP + + ++ G V+ AL+
Sbjct: 228 GAVT-----CWGRNGNGQLGDGTTTQR-----STPVNVLGLSSEVAAITAGDVYTCALTT 277
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G + WG N GQLG G T E + +D +T ++ G H+ A++
Sbjct: 278 GGGVTCWGANWSGQLGDGTTDE----------RSTPVDVVGLSSGVTAIAAGNDHTCAIT 327
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK--DVACGGVHSCALTSKG 302
G V WG+ QLG + ++ P V ++G+ + +A G H+CA+T+ G
Sbjct: 328 TGGGVSCWGVNQYSQLGDGTTT---QQSTP---VVVNGLSSRAAAIAAGDGHTCAMTTGG 381
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVY 360
+ WG + +GQLG G T+ R P+ V + +GV + G SHT
Sbjct: 382 GVSCWGRNWSGQLGDGTTTQ-------------RRTPMQVEGLSSGVADITAGDSHTCAL 428
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
+G + WG N GQ + + P V+ V + AG H+ L+
Sbjct: 429 STEGGVTCWGNNESGQLGDGTTIQRSTPVQVEGLSSGVVAITAGDSHTCALS 480
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 156/373 (41%), Gaps = 46/373 (12%)
Query: 48 QLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEK 107
+LP + + IA G +T A+ ++ + WG NEFGQLGDGT R P
Sbjct: 42 ELPATVLEANIASAQHRTPIAAGDAYTCALTTNSAVICWGNNEFGQLGDGTTIQRNTPVA 101
Query: 108 VKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPR-LFWGAFTPN 166
V L S V + AH A G +S WG N+ + TP
Sbjct: 102 VNGLSSGVVAIAAGYAHTCA-----LTTSGGVS-----CWGNNESGQLGNGITIQRRTPV 151
Query: 167 TI------ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF 220
+ + ++ G H AL+ G + WG N YGQLG G T + P + G +
Sbjct: 152 QVAGLSSGVAAIAAGEYHTCALTTDGAVTCWGSNGYGQLGDGTTTQ-RSTPVQVAGLSS- 209
Query: 221 LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL 280
+T ++ G H+ A++ G V WG GQLG + + P V+ L
Sbjct: 210 --------GVTAITAGGSHTCALTTGGAVTCWGRNGNGQLGDGTTT---QRSTPVNVLGL 258
Query: 281 DGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI 340
+ + G V++CALT+ G + WG + +GQLG + T R+ P+
Sbjct: 259 SS-EVAAITAGDVYTCALTTGGGVTCWGANWSGQLG-------------DGTTDERSTPV 304
Query: 341 LVV--PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEV 398
VV +GV +A G+ HT G + WG N Y Q + +T P V+
Sbjct: 305 DVVGLSSGVTAIAAGNDHTCAITTGGGVSCWGVNQYSQLGDGTTTQQSTPVVVNGLSSRA 364
Query: 399 RKLAAGGGHSAVL 411
+AAG GH+ +
Sbjct: 365 AAIAAGDGHTCAM 377
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 120/404 (29%), Positives = 176/404 (43%), Gaps = 65/404 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+ WG N SGQ G G Q R P Q+ G +S DI G HT A++++G
Sbjct: 383 VSCWGRNWSGQLG-DGTTTQRRTPMQVE--------GLSSGVADITAGDSHTCALSTEGG 433
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ WG NE GQLGDGT R P +V+ L S V +I+ G T A++ +G ++
Sbjct: 434 VTCWGNNESGQLGDGTTIQRSTPVQVEGLSSGVV-AITAGDSHTCALS----TEGGVT-- 486
Query: 143 RLWVWGQN------QGSNFPRLFWGAFTPNTI------ICQVSCGSVHVVALSECGLLQA 190
WG N G+ R TP + + ++ G H AL+ G +
Sbjct: 487 ---CWGGNGSGQLGNGTTTQR-----STPVQVEGLSSGVMAITAGDSHTCALTTGGGVTC 538
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG N YGQLG G T + P + G + + ++ G H+ A+S G V
Sbjct: 539 WGGNWYGQLGDGTTTQ-RNMPVNVVGLSS---------GVAAIAAGGSHTCALSTEGGVT 588
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
WG + QLG + + + P +V L + +A G H+CAL + G + WG +
Sbjct: 589 CWGWNTYDQLGDGTRTNHNT---PVQVEGLSS-GVAAIAAGYAHTCALITSGEVTCWGWN 644
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGRIHG 368
GQLG G T+ R P++V + + V + G++HT G +
Sbjct: 645 WYGQLGDGTTTQ-------------RMTPVVVNGLSSEVAAIVAGYAHTCALSTGGGVTC 691
Query: 369 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
WG+N Y Q N + P VD V LAAG H+ L+
Sbjct: 692 WGWNKYYQLGNGTISQRSIPMDVDGLSSGVAALAAGDAHTCGLS 735
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 176/410 (42%), Gaps = 65/410 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ SA+ WG N GQ G I + P + G +G + IA G+ HT A
Sbjct: 71 LTTNSAVICWGNNEFGQLGDG-----TTIQRNTPVAVNGLSSGV----VAIAAGYAHTCA 121
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ + G + WG NE GQLG+G R+ P +V L S V +I+ G + T A+ D
Sbjct: 122 LTTSGGVSCWGNNESGQLGNGITIQRRTPVQVAGL-SSGVAAIAAGEYHTCAL----TTD 176
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQV----------SCGSVHVVALSECG 186
G ++ WG N + +L G T + QV + G H AL+ G
Sbjct: 177 GAVT-----CWGSN---GYGQLGDGTTTQRSTPVQVAGLSSGVTAITAGGSHTCALTTGG 228
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ WG N GQLG G T + P + G + ++ ++ G+ ++ A++
Sbjct: 229 AVTCWGRNGNGQLGDGTTTQ-RSTPVNVLGLSS---------EVAAITAGDVYTCALTTG 278
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
G V WG GQLG + D+ P VV L + +A G H+CA+T+ G +
Sbjct: 279 GGVTCWGANWSGQLGDGTT---DERSTPVDVVGLSS-GVTAIAAGNDHTCAITTGGGVSC 334
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ----LVACGHSHTLVYMR 362
WG +Q QLG G T+ ++ P++V NG+ +A G HT
Sbjct: 335 WGVNQYSQLGDGTTTQ-------------QSTPVVV--NGLSSRAAAIAAGDGHTCAMTT 379
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
G + WG N GQ + +T P V+ V + AG H+ L+
Sbjct: 380 GGGVSCWGRNWSGQLGDGTTTQRRTPMQVEGLSSGVADITAGDSHTCALS 429
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 145/333 (43%), Gaps = 44/333 (13%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + + WG N SGQ G G Q P Q+ G +S + I G HT A
Sbjct: 479 LSTEGGVTCWGGNGSGQLG-NGTTTQRSTPVQVE--------GLSSGVMAITAGDSHTCA 529
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ + G + WG N +GQLGDGT R P V L S V +I+ G T A++ +
Sbjct: 530 LTTGGGVTCWGGNWYGQLGDGTTTQRNMPVNVVGL-SSGVAAIAAGGSHTCALS----TE 584
Query: 137 GTISTSRLWVW--------GQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
G ++ W W G N P G + + ++ G H AL G +
Sbjct: 585 GGVT---CWGWNTYDQLGDGTRTNHNTPVQVEGLSSG---VAAIAAGYAHTCALITSGEV 638
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG+N YGQLG G T + + P V+ G + ++ + G H+ A+S G
Sbjct: 639 TCWGWNWYGQLGDGTTTQRMT-PVVVNGLSS---------EVAAIVAGYAHTCALSTGGG 688
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
V WG QLG+ ++ + +P V L + +A G H+C L++ G + WG
Sbjct: 689 VTCWGWNKYYQLGNGTI---SQRSIPMDVDGLSS-GVAALAAGDAHTCGLSTGGGVTCWG 744
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL 341
GQLG+G T ++ P + F +P++
Sbjct: 745 WDVYGQLGVG--TIAYRTTPVDVTVLFVYLPVI 775
>gi|348575702|ref|XP_003473627.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cavia
porcellus]
Length = 1080
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 119/427 (27%), Positives = 185/427 (43%), Gaps = 77/427 (18%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTP-------------------NTIICQVSCGSVHV---- 179
+L + G + PR F P + +C H+
Sbjct: 115 QLGLLGSEECIRVPR--KSIFMPVDKNIRIKECKKTASRKSWVSTLCSELAPDSHLAESG 172
Query: 180 -VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
VA+S + WG N+YGQLG GI C+ P++IK QV+ G
Sbjct: 173 QVAVSASEVF-CWGQNKYGQLGLGIDCKKQTSPQLIKSLLGI--------PFMQVAAGGA 223
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
HS ++ +G ++ WG GQLG L + +P + +L I + CG H+ AL
Sbjct: 224 HSFVLTLSGAIFGWGRNKFGQLG---LNDENDRYVPYLLKSLRSQKIVYICCGEDHTAAL 280
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 358
T +G ++ +G GQ LG + S + P + +I V +ACG HT
Sbjct: 281 TKEGGVFTFGAGGYGQ--LGHNSTSHEINPRKVFELMGSI--------VTQIACGRQHTS 330
Query: 359 VYM-RDGRIHGWGYNSYGQ-----AANEKSTYA----WYPS----PVDWCVGE---VRKL 401
++ GRI+ +G GQ +N KS + W+P P D E V+++
Sbjct: 331 AFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFPYNGQCPPDLDSEEYFCVKRI 390
Query: 402 AAGGGHS 408
+GG S
Sbjct: 391 FSGGDQS 397
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 142/324 (43%), Gaps = 51/324 (15%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y G N GQ G E+ + P+Q+ A + ++CG HT A+ G
Sbjct: 54 TVYTCGCNDLGQLGH---EKSRKKPEQVV-------ALDAQNIVAVSCGEAHTLALNDKG 103
Query: 82 TLFTWGANEFGQLGD-GTEEGRKHPEK-----------VKQLQSEFVKSISCGAHCTAAI 129
++ WG + GQLG G+EE + P K +K+ + + C+
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRKSIFMPVDKNIRIKECKKTASRKSWVSTLCSELA 163
Query: 130 AEPRENDG---TISTSRLWVWGQNQGSNF-----------PRLFWGAFTPNTIICQVSCG 175
+ + +S S ++ WGQN+ P+L QV+ G
Sbjct: 164 PDSHLAESGQVAVSASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLL--GIPFMQVAAG 221
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
H L+ G + WG N++GQLG + Y +L ++ +KI + C
Sbjct: 222 GAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR---------YVPYLLKSLRSQKIVYICC 272
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
GE H+AA+++ G V+T+G G GQLGH S E+ PR+V L G + +ACG H+
Sbjct: 273 GEDHTAALTKEGGVFTFGAGGYGQLGH---NSTSHEINPRKVFELMGSIVTQIACGRQHT 329
Query: 296 CALT-SKGALYAWGGSQAGQLGLG 318
A S G +Y++G GQLG G
Sbjct: 330 SAFVPSSGRIYSFGLGGNGQLGTG 353
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 156/356 (43%), Gaps = 49/356 (13%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS---------CGEYH-SAAVSENG 247
QLG + E ++ PR K +D+ +++ + + C E + ++E+G
Sbjct: 115 QLGLLGSEECIRVPR--KSIFMPVDKNIRIKECKKTASRKSWVSTLCSELAPDSHLAESG 172
Query: 248 -------EVYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
EV+ WG GQLG C Q+ P+ + +L GI VA GG HS
Sbjct: 173 QVAVSASEVFCWGQNKYGQLGLGIDCKKQTS-----PQLIKSLLGIPFMQVAAGGAHSFV 227
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT 357
LT GA++ WG ++ GQLGL +E+D Y + + + + CG HT
Sbjct: 228 LTLSGAIFGWGRNKFGQLGLN----------DENDRYVPYLLKSLRSQKIVYICCGEDHT 277
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
++G + +G YGQ + +++ P V +G V ++A G H++
Sbjct: 278 AALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 333
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 122/269 (45%), Gaps = 46/269 (17%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQ---LPPE----LFGCPAGANSR-WLDIACGH 71
K +Y WG + GQ G G E +R+P++ +P + + C A+ + W+ C
Sbjct: 102 KGQVYAWGLDSDGQLGLLGSEECIRVPRKSIFMPVDKNIRIKECKKTASRKSWVSTLCSE 161
Query: 72 --------EHTAAVASDGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISC 121
E S +F WG N++GQLG G + + + P+ +K L F++ +
Sbjct: 162 LAPDSHLAESGQVAVSASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAG 221
Query: 122 GAHCTAAIAEPRENDGTISTSRLWVWGQNQ----GSNFPRLFWGAFTPNTI----ICQVS 173
GAH T+S + ++ WG+N+ G N + + ++ I +
Sbjct: 222 GAHSFVL---------TLSGA-IFGWGRNKFGQLGLNDENDRYVPYLLKSLRSQKIVYIC 271
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
CG H AL++ G + +G YGQLG T + +V + +TQ+
Sbjct: 272 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQI 322
Query: 234 SCGEYHSAA-VSENGEVYTWGLGSVGQLG 261
+CG H++A V +G +Y++GLG GQLG
Sbjct: 323 ACGRQHTSAFVPSSGRIYSFGLGGNGQLG 351
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 97/204 (47%), Gaps = 20/204 (9%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
+ S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 177 SASEVFCWGQNKYGQLGL-GIDCKKQTSPQLIKSLLGIP------FMQVAAGGAHSFVLT 229
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G
Sbjct: 230 LSGAIFGWGRNKFGQLGLNDENDRYVPYLLKSLRSQKIVYICCGEDHTAALTK----EGG 285
Query: 139 ISTSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWG 192
+ T +GQ N S+ PR + +I+ Q++CG H A + G + ++G
Sbjct: 286 VFTFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFG 343
Query: 193 YNEYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 344 LGGNGQLGTGST-SNRKSPFTVKG 366
>gi|350405799|ref|XP_003487554.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Bombus impatiens]
Length = 5118
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 172/403 (42%), Gaps = 93/403 (23%)
Query: 18 PAKSAIYVWGYNHSGQTG-RKGRERQL----RIPKQLPP-----------------ELFG 55
P SA+YVWG N Q G KG + +L + +L P +L+
Sbjct: 3251 PQHSAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYA 3310
Query: 56 CPAGANSRW------------------------LDIACGHEHTAAVASDGTLFTWGANEF 91
C G N R + + G +H A+ DG +F+WG E
Sbjct: 3311 CGEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKVAVHSGGKHALALTQDGKIFSWGEGED 3370
Query: 92 GQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQ 151
G+LG G P ++ L+S+ ++ I+CG+ +AAI S+ L+ WG +
Sbjct: 3371 GKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAIT---------SSGELYTWGLGE 3421
Query: 152 GSNFPRLFWG----AFTPNTI-------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQ 198
+ RL G P + + QV+CGS +AL+ G + +WG ++G+
Sbjct: 3422 ---YGRLGHGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGK 3478
Query: 199 LGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVG 258
LGRG +G P +I + Q+ CG S A+++ GEV+TWG G
Sbjct: 3479 LGRG-GSDGCYTPLLIDRLNGL--------GVVQIECGAQFSLALTKYGEVWTWGKGDYF 3529
Query: 259 QLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLG 318
+LGH + K P V L G + VA G +H A+T G +YAWG + GQ G G
Sbjct: 3530 RLGHGNDHHVRK---PTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG 3586
Query: 319 PQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
S I N+ + + V V+CG SH++ ++
Sbjct: 3587 ------STIVNKKPSLVHELD----DARVNRVSCGSSHSIAWV 3619
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 153/336 (45%), Gaps = 51/336 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R PK L EL G + +DIACG H+AA+ S G
Sbjct: 4367 VYSWGEGDDGKLGHGNRLMYDR-PK-LIEELLG------TEIVDIACGGHHSAAITSAGW 4418
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG G E + P+ V+ LQ V ++CG+ + +++
Sbjct: 4419 LYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDN------ 4472
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
+W WG R G P I + +V CGS VAL+ G + WG
Sbjct: 4473 -VWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKG 4531
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G T + ++ PR + A + +KI ++ G H A ++ GEV+TWG
Sbjct: 4532 DYHRLGHG-TDDHVRRPRKVA--------ALQGKKIISIATGSLHCVACTDKGEVFTWGD 4582
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G I VACG H+ AW +A
Sbjct: 4583 NDEGQLGDGTTSALQR---PRLVHALQGKKITRVACGSAHT---------LAWSTMKAT- 4629
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
Q+R + P E D +++P V+ N + L+
Sbjct: 4630 -----QSRMPATTPMEYD-LVKDLPFPVLHNRLVLL 4659
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 161/360 (44%), Gaps = 59/360 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y GY +G+ G G + + P L + + + G +H A
Sbjct: 4307 VTADGKVYATGYGAAGRLGIGGTD------SVMVPTLLESIQHVFVKKVAVNSGGKHCLA 4360
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
++S+G +++WG + G+LG G P+ +++L + I+CG H +AAI
Sbjct: 4361 LSSEGHVYSWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAIT------ 4414
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGS--VHVVALS 183
S L+ WG+ + + RL G TP + + V+CGS + ++
Sbjct: 4415 ---SAGWLYTWGKGR---YGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVT 4468
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ + +WG +YG+LGRG +G + P I+ A + +V CG S A+
Sbjct: 4469 DDDNVWSWGDGDYGKLGRG-GSDGCKIPMKIESLAGL--------GVIKVECGSQFSVAL 4519
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+ +G +YTWG G +LGH + D PR+V AL G I +A G +H A T KG
Sbjct: 4520 TRSGAIYTWGKGDYHRLGH---GTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGE 4576
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 360
++ WG + GQLG G T P LV + VACG +HTL +
Sbjct: 4577 VFTWGDNDEGQLGDG-------------TTSALQRPRLVHALQGKKITRVACGSAHTLAW 4623
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 105/406 (25%), Positives = 176/406 (43%), Gaps = 64/406 (15%)
Query: 22 AIYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
AIY WG+NH GQ G G E ++++P C + + R + + G + AV +D
Sbjct: 4260 AIYGWGHNHRGQLG--GLEGAKVKLP-------VLCESLSALRPVQLTGGEQTLLAVTAD 4310
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDG 137
G ++ G G+LG G + P ++ +Q FVK ++ G HC A +E
Sbjct: 4311 GKVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSE------ 4364
Query: 138 TISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
++ WG+ P+L T I ++CG H A++ G
Sbjct: 4365 ----GHVYSWGEGDDGKLGHGNRLMYDRPKLIEELL--GTEIVDIACGGHHSAAITSAGW 4418
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSE 245
L WG YG+LG G + + L P++++ + K+ V+C G+ + V++
Sbjct: 4419 LYTWGKGRYGRLGHGDSEDQLT-PKLVEALQDY--------KVIDVACGSGDAQTLCVTD 4469
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+ V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4470 DDNVWSWGDGDYGKLGR---GGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIY 4526
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRD 363
WG +LG G +D + R + G ++ +A G H +
Sbjct: 4527 TWGKGDYHRLGHG------------TDDHVRRPRKVAALQGKKIISIATGSLHCVACTDK 4574
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
G + WG N GQ + ++ P V G ++ ++A G H+
Sbjct: 4575 GEVFTWGDNDEGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHT 4620
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 150/335 (44%), Gaps = 50/335 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
I+ WG G+ G G L P+ + + + R DIACG H+AA+ S G
Sbjct: 3362 IFSWGEGEDGKLGH-GNSVSLDKPRLIE-------SLKSKRIRDIACGSGHSAAITSSGE 3413
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ V+ L + V ++CG+ +A DG++
Sbjct: 3414 LYTWGLGEYGRLGHGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMA--LTADGSV--- 3468
Query: 143 RLWVWGQNQGSNFPRLFWGA----FTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+ WG +F +L G +TP I + Q+ CG+ +AL++ G + W
Sbjct: 3469 --YSWGDG---DFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTW 3523
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P +++G +K+ V+ G H AV++ G+VY
Sbjct: 3524 GKGDYFRLGHG-NDHHVRKPTLVEGLRG--------KKVVHVAVGALHCLAVTDTGQVYA 3574
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA--LTSKGA------ 303
WG GQ G+ S K P V LD + V+CG HS A LT + A
Sbjct: 3575 WGDNDHGQQGNGSTIVNKK---PSLVHELDDARVNRVSCGSSHSIAWVLTDQPATNNHEP 3631
Query: 304 -LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRN 337
++ GQ+ L + + I + DT N
Sbjct: 3632 VMFPTEKDPLGQISLTIPSANSDEITSTGDTIVHN 3666
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 126/258 (48%), Gaps = 41/258 (15%)
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
H A+ D ++++WG + G+LG G P+ V+ L + + I+CG+ +A ++
Sbjct: 508 HYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGSTYSAVLS-- 565
Query: 133 RENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGS--VHV 179
S L+ WG+ N+ RL G P + + V+CGS
Sbjct: 566 -------SNGELYTWGRG---NYGRLGHGNSDNVLIPTLVTALNGHMVVYVACGSGDSQT 615
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
+ ++ G++ +WG YG+LGRG C+G + P+++ K LD + +V CG
Sbjct: 616 LCVTASGIVFSWGDGNYGKLGRG-GCDGSKTPKIVD---KLLD-----INVAKVYCGGQF 666
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCA 297
SAA++ GEVYTWG G +LGH G++E + P+ + L +K++ G H A
Sbjct: 667 SAALTAYGEVYTWGKGEGYRLGH-----GNEEHIRYPKVIEVLKPKKVKELCVGNFHVLA 721
Query: 298 LTSKGALYAWGGSQAGQL 315
LT +Y WG + GQ+
Sbjct: 722 LTEDQLVYGWGRNDYGQI 739
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 126/267 (47%), Gaps = 42/267 (15%)
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
S ++VWG N +GS + ++ GS + +S+ G L A G
Sbjct: 3254 SAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGE 3313
Query: 194 NEYGQLGRGI---TCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
G+LG G CE P++I ++++ ++K+ V G H+ A++++G+++
Sbjct: 3314 GTNGRLGLGDDSNVCE----PKLIPFLSQYM-----IKKVA-VHSGGKHALALTQDGKIF 3363
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
+WG G G+LGH + S DK PR + +L I+D+ACG HS A+TS G LY WG
Sbjct: 3364 SWGEGEDGKLGHGNSVSLDK---PRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLG 3420
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILV---VPNGVQLVACG--HSHTLVYMRDGR 365
+ G+LG G DT + P LV V V VACG + T+ DG
Sbjct: 3421 EYGRLGHG-------------DTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGS 3467
Query: 366 IHGWGYNSYGQAANEKSTYAWYPSPVD 392
++ WG +G+ S + P +D
Sbjct: 3468 VYSWGDGDFGKLGRGGSDGCYTPLLID 3494
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 124/288 (43%), Gaps = 47/288 (16%)
Query: 103 KHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNF------- 155
++P++V + V I+ + T +A ++ S ++ WG G
Sbjct: 484 QYPQRVYGFSEKPVTMIASHSDGTHYLALTQD-------SSVYSWGNGDGGRLGHGDRVW 536
Query: 156 ---PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPR 212
P+L N I ++CGS + LS G L WG YG+LG G + + P
Sbjct: 537 YDEPKLVEALVDKN--ITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHG-NSDNVLIPT 593
Query: 213 VIKGYAKFLDEAPELEKITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGH--CSLQSG 268
++ + + V+CG + + V+ +G V++WG G+ G+LG C
Sbjct: 594 LVTALNGHM--------VVYVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGC----- 640
Query: 269 DKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIP 328
D P+ V L I + V CGG S ALT+ G +Y WG + +LG G
Sbjct: 641 DGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYRLGHG---------- 690
Query: 329 NESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
NE + + ++ P V+ + G+ H L D ++GWG N YGQ
Sbjct: 691 NEEHIRYPKVIEVLKPKKVKELCVGNFHVLALTEDQLVYGWGRNDYGQ 738
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 143/344 (41%), Gaps = 40/344 (11%)
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G ++ WG N GQLG K P + L + ++ G A+ DG +
Sbjct: 4259 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTA----DGKVY 4314
Query: 141 TS------RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
+ RL + G + P L V+ G H +ALS G + +WG
Sbjct: 4315 ATGYGAAGRLGIGGTD-SVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEG 4373
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+ G+LG G R++ K ++E E I ++CG +HSAA++ G +YTWG
Sbjct: 4374 DDGKLG--------HGNRLMYDRPKLIEELLGTE-IVDIACGGHHSAAITSAGWLYTWGK 4424
Query: 255 GSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGS 310
G G+LGH GD E L P+ V AL + DVACG + +T +++WG
Sbjct: 4425 GRYGRLGH-----GDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDG 4479
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWG 370
G+LG G IP + ++ + GV V CG ++ R G I+ WG
Sbjct: 4480 DYGKLGRGGS--DGCKIPMKIES--------LAGLGVIKVECGSQFSVALTRSGAIYTWG 4529
Query: 371 YNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
Y + + + P V G ++ +A G H D
Sbjct: 4530 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTD 4573
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 82/182 (45%), Gaps = 26/182 (14%)
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSC 296
H A++++ VY+WG G G+LGH GD+ P+ V AL I +ACG +S
Sbjct: 508 HYLALTQDSSVYSWGNGDGGRLGH-----GDRVWYDEPKLVEALVDKNITFIACGSTYSA 562
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NG--VQLVAC- 352
L+S G LY WG G+LG G SD IP LV NG V VAC
Sbjct: 563 VLSSNGELYTWGRGNYGRLGHG-----------NSDNVL--IPTLVTALNGHMVVYVACG 609
Query: 353 -GHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAV 410
G S TL G + WG +YG+ + P VD + V K+ GG SA
Sbjct: 610 SGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAA 669
Query: 411 LA 412
L
Sbjct: 670 LT 671
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 99/229 (43%), Gaps = 31/229 (13%)
Query: 190 AWGYNEYGQLGRGITCEGLQGPRV-IKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG N+ QLG GL+G ++ + Y++ L + K ++ G VS+ G+
Sbjct: 3258 VWGLNDKDQLG------GLKGSKIKLPVYSEVLSKL----KPIHIAGGSKTLFVVSQEGK 3307
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHSCALTSKGALYA 306
+Y G G+ G+LG L P+ + L IK VA GG H+ ALT G +++
Sbjct: 3308 LYACGEGTNGRLG---LGDDSNVCEPKLIPFLSQYMIKKVAVHSGGKHALALTQDGKIFS 3364
Query: 307 WGGSQAGQLGLGPQTR--SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 364
WG + G+LG G LI + R+I ACG H+ G
Sbjct: 3365 WGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDI------------ACGSGHSAAITSSG 3412
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
++ WG YG+ + + P V VG+ V ++A G + +A
Sbjct: 3413 ELYTWGLGEYGRLGHGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMA 3461
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
I Q+ C E +S +G VY GS Q P+RV + +A
Sbjct: 455 IKQLCCTERALMILSISGNVYMMYYGSETQY-------------PQRVYGFSEKPVTMIA 501
Query: 290 C--GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV---VP 344
G H ALT ++Y+WG G+LG G D + + P LV V
Sbjct: 502 SHSDGTHYLALTQDSSVYSWGNGDGGRLGHG-------------DRVWYDEPKLVEALVD 548
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAA 403
+ +ACG +++ V +G ++ WG +YG+ + S P+ V G V +A
Sbjct: 549 KNITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVYVAC 608
Query: 404 GGGHSAVL 411
G G S L
Sbjct: 609 GSGDSQTL 616
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 71/176 (40%), Gaps = 16/176 (9%)
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
++ VY WGL QLG G K LP L + +A G ++ +G L
Sbjct: 3252 QHSAVYVWGLNDKDQLGGL---KGSKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKL 3308
Query: 305 YAWGGSQAGQLGLGPQTR--SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
YA G G+LGLG + LIP S + + V G H L +
Sbjct: 3309 YACGEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKVA----------VHSGGKHALALTQ 3358
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADACSL 417
DG+I WG G+ + S P ++ + +R +A G GHSA + + L
Sbjct: 3359 DGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGEL 3414
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 74/170 (43%), Gaps = 12/170 (7%)
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G +Y WG GQLG G K LP +L + + G A+T+ G +Y
Sbjct: 4258 SGAIYGWGHNHRGQLGGLE---GAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVY 4314
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
A G AG+LG+G T S ++P T +I + V V G H L +G
Sbjct: 4315 ATGYGAAGRLGIG-GTDSV-MVP----TLLESIQHVFVKKVA--VNSGGKHCLALSSEGH 4366
Query: 366 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADA 414
++ WG G+ + P ++ +G E+ +A GG HSA + A
Sbjct: 4367 VYSWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSA 4416
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 74/176 (42%), Gaps = 31/176 (17%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++Y WG G+ GR G + P L G + I CG + + A
Sbjct: 3462 LTADGSVYSWGDGDFGKLGRGGSD------GCYTPLLIDRLNGLGV--VQIECGAQFSLA 3513
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPREN 135
+ G ++TWG ++ +LG G + + P V+ L+ + V ++ GA HC A
Sbjct: 3514 LTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAV------- 3566
Query: 136 DGTISTSRLWVWGQN------QGSNF----PRLFWGAFTPNTIICQVSCGSVHVVA 181
T +++ WG N GS P L + + +VSCGS H +A
Sbjct: 3567 ---TDTGQVYAWGDNDHGQQGNGSTIVNKKPSLVHE--LDDARVNRVSCGSSHSIA 3617
>gi|387541824|gb|AFJ71539.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
Length = 1023
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 122/258 (47%), Gaps = 39/258 (15%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I Q++CG H +ALS+ G L AWG N +GQLG G T P++++ A
Sbjct: 139 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGV-------- 190
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
+ Q+S GE HS A+S +G +Y+WG GQLG +S D P + ALD ++ +
Sbjct: 191 PLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDS---PSLIEALDNQKVEFL 247
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV---VPN 345
ACGG HS LT G L+ +G + GQLG N + R P LV V N
Sbjct: 248 ACGGSHSALLTQDGLLFTFGAGKHGQLG-----------HNSTQNELR--PCLVAELVGN 294
Query: 346 GVQLVACGHSHTLVYMRD-GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL--- 401
V +ACG HTL Y+ D G++ +G GQ N + P PV E KL
Sbjct: 295 RVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNGGTLDQLIPLPVKVSSSEELKLESH 354
Query: 402 --------AAGGGHSAVL 411
AGG S +L
Sbjct: 355 TSEKELIMIAGGNQSILL 372
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 95/185 (51%), Gaps = 19/185 (10%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+KI Q++CG+YHS A+S+ GE++ WG GQLG ++ P+ V L G+ +
Sbjct: 137 KKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG--RTFPSTTTPQIVEHLAGVPLAQ 194
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP--- 344
++ G HS AL+ G +Y+WG ++ GQLGLG T ++ P L+
Sbjct: 195 ISAGEAHSMALSMSGNIYSWGKNEFGQLGLG-------------HTESKDSPSLIEALDN 241
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAA 403
V+ +ACG SH+ + +DG + +G +GQ + + P V VG V ++A
Sbjct: 242 QKVEFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIAC 301
Query: 404 GGGHS 408
G H+
Sbjct: 302 GRWHT 306
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 32/213 (15%)
Query: 62 SRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDG-TEEGRKHPEKVKQLQSEFVKSIS 120
+ + I CG H+ A++ G LF WG N GQLG G T P+ V+ L + IS
Sbjct: 137 KKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLAQIS 196
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQN----------QGSNFPRLFWGAFTPNTIIC 170
G + A++ + ++ WG+N + + P L N +
Sbjct: 197 AGEAHSMALS---------MSGNIYSWGKNEFGQLGLGHTESKDSPSLIEAL--DNQKVE 245
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
++CG H L++ GLL +G ++GQLG T L+ V + ++
Sbjct: 246 FLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGN---------RV 296
Query: 231 TQVSCGEYHSAA-VSENGEVYTWGLGSVGQLGH 262
TQ++CG +H+ A VS+ G+V+++G G GQLG+
Sbjct: 297 TQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGN 329
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 15/190 (7%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G GR Q+ L G P I+ G H+ A++ G
Sbjct: 158 LFAWGQNLHGQLGV-GRTFPSTTTPQIVEHLAGVPLA------QISAGEAHSMALSMSGN 210
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST- 141
+++WG NEFGQLG G E + P ++ L ++ V+ ++CG +A + + DG + T
Sbjct: 211 IYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALLTQ----DGLLFTF 266
Query: 142 --SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYNEYGQ 198
+ G N N R A + Q++CG H +A +S+ G + ++G + GQ
Sbjct: 267 GAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQ 326
Query: 199 LGRGITCEGL 208
LG G T + L
Sbjct: 327 LGNGGTLDQL 336
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD-G 81
++ +G GQ G + +LR L EL G +R IACG HT A SD G
Sbjct: 263 LFTFGAGKHGQLGHNSTQNELR--PCLVAELVG------NRVTQIACGRWHTLAYVSDFG 314
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVK 117
+F++G+ + GQLG+G + P VK SE +K
Sbjct: 315 KVFSFGSGKDGQLGNGGTLDQLIPLPVKVSSSEELK 350
>gi|383865452|ref|XP_003708187.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Megachile
rotundata]
Length = 4755
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 154/339 (45%), Gaps = 57/339 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R PK L EL G + +D+ACG H+AA+ S G
Sbjct: 4004 VYSWGEGDDGKLGHGNRLSYDR-PK-LIEELLG------TEIVDVACGGHHSAAITSAGW 4055
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG G E + P+ V+ LQ V ++CG+ + +++
Sbjct: 4056 LYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDN------ 4109
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
+W WG R G P I + +V CGS VAL+ G + WG
Sbjct: 4110 -VWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVIKVECGSQFSVALTRSGSIYTWGKG 4168
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G T + ++ PR + A + +KI ++ G H A S+ GEV+TWG
Sbjct: 4169 DYHRLGHG-TDDHVRRPRKVA--------ALQGKKIISIATGSLHCVACSDKGEVFTWGD 4219
Query: 255 GSVGQLGH---CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
GQLG C+LQ PR V AL G I VACG H+ AW +
Sbjct: 4220 NDEGQLGDGTTCALQR------PRLVHALQGKKITRVACGSAHT---------LAWSTMK 4264
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
A Q+R + P E D +++P V+ N + L+
Sbjct: 4265 AT------QSRMPATTPMEYD-LVKDLPFPVLHNRLVLL 4296
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 126/465 (27%), Positives = 202/465 (43%), Gaps = 70/465 (15%)
Query: 5 EIIGETARPVDNI--PAKSAIYVWGYNHSGQTG-RKGRERQLRIPKQLPPELFGCPAGAN 61
EI+ E A + P SA+YVWG N Q G KG + +L + + +L
Sbjct: 2891 EIVQEQASSQRGVETPQHSAVYVWGLNDKDQLGGLKGSKIKLPVYSESLSKL-------- 2942
Query: 62 SRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC 121
+ + IA G + V+ +G L+ G G+LG G + P+ + L +K ++
Sbjct: 2943 -KPVHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDGNACEPKPIPFLSQYVIKKVAV 3001
Query: 122 GAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQ 171
+ A+A DG R++ WG+ + PRL + I
Sbjct: 3002 HSGGKHALA--LTQDG-----RVFSWGEGEDGKLGHGNCSSLDKPRLIESLKSKR--IRD 3052
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
V+CGS H A++ G L WG EYG+LG G T L+ P++++ +++
Sbjct: 3053 VACGSGHSAAITSSGELYTWGLGEYGRLGHGDTNTQLK-PKLVQSLVG--------QRVI 3103
Query: 232 QVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
QV+CG + + A++ +G VY+WG G G+LG D P V L+G+ + +
Sbjct: 3104 QVACGSRDAQTMALTADGSVYSWGDGDFGKLGR---GGSDGCYTPLLVDRLNGLGVVQIE 3160
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
CG S ALT G ++ WG +LG G +D + R ++ G ++
Sbjct: 3161 CGAQFSLALTKYGEVWTWGKGDYFRLGHG------------NDHHVRKPTLVEGLRGKKV 3208
Query: 350 --VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV-DWCVGEVRKLAAGGG 406
VA G H L G+++ WG N +GQ N + PS V + V +++ G
Sbjct: 3209 IHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVNKKPSLVHELDDARVNRVSCGSS 3268
Query: 407 HSA--VLAD--ACSLKELCEFRLAE------SVTLSNASEIEDVA 441
HS VL D A + +E F A+ S+ L N + E +
Sbjct: 3269 HSIAWVLTDQPAANNQEPVTFPTAKDPLGQASLRLKNILDTESIV 3313
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 160/360 (44%), Gaps = 59/360 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y GY G+ G G + + P L + + + G +H A
Sbjct: 3944 VTADGKVYATGYGAVGRLGIGGTDSVMM------PTLLESIQHVFVKKVAVNSGGKHCLA 3997
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
++S+G +++WG + G+LG G P+ +++L + ++CG H +AAI
Sbjct: 3998 LSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDVACGGHHSAAIT------ 4051
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGS--VHVVALS 183
S L+ WG+ + + RL G TP + + V+CGS + ++
Sbjct: 4052 ---SAGWLYTWGKGR---YGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVT 4105
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ + +WG +YG+LGRG +G + P I+ A + +V CG S A+
Sbjct: 4106 DDDNVWSWGDGDYGKLGRG-GSDGCKVPMKIESLAGL--------GVIKVECGSQFSVAL 4156
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+ +G +YTWG G +LGH + D PR+V AL G I +A G +H A + KG
Sbjct: 4157 TRSGSIYTWGKGDYHRLGH---GTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGE 4213
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 360
++ WG + GQLG G T P LV + VACG +HTL +
Sbjct: 4214 VFTWGDNDEGQLGDG-------------TTCALQRPRLVHALQGKKITRVACGSAHTLAW 4260
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 105/406 (25%), Positives = 175/406 (43%), Gaps = 64/406 (15%)
Query: 22 AIYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
AIY WG+NH GQ G G E ++++P C + + R + + G + AV +D
Sbjct: 3897 AIYGWGHNHRGQLG--GLEGAKVKLP-------VLCESLSALRPVQLTGGEQTLFAVTAD 3947
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDG 137
G ++ G G+LG G + P ++ +Q FVK ++ G HC A +E
Sbjct: 3948 GKVYATGYGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSE------ 4001
Query: 138 TISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
++ WG+ P+L T I V+CG H A++ G
Sbjct: 4002 ----GHVYSWGEGDDGKLGHGNRLSYDRPKLIEELL--GTEIVDVACGGHHSAAITSAGW 4055
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSE 245
L WG YG+LG G + + L P++++ + K+ V+C G+ + V++
Sbjct: 4056 LYTWGKGRYGRLGHGDSEDQLT-PKLVEALQDY--------KVIDVACGSGDAQTLCVTD 4106
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+ V++WG G G+LG D +P ++ +L G+ + V CG S ALT G++Y
Sbjct: 4107 DDNVWSWGDGDYGKLGR---GGSDGCKVPMKIESLAGLGVIKVECGSQFSVALTRSGSIY 4163
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRD 363
WG +LG G +D + R + G ++ +A G H +
Sbjct: 4164 TWGKGDYHRLGHG------------TDDHVRRPRKVAALQGKKIISIATGSLHCVACSDK 4211
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
G + WG N GQ + + P V G ++ ++A G H+
Sbjct: 4212 GEVFTWGDNDEGQLGDGTTCALQRPRLVHALQGKKITRVACGSAHT 4257
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 144/293 (49%), Gaps = 46/293 (15%)
Query: 59 GANSRWLDIACGH---EHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
G + +++ + H +H A+ D ++++WG + G+LG G + P+ ++ L +
Sbjct: 500 GFSDKFVAMIASHPDGKHYLALTEDSSVYSWGNGDGGRLGHGDRTWYEEPKLIESLVDKN 559
Query: 116 VKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI--- 168
+ I+CG+ +AA++ S L+ WG+ N+ RL G P +
Sbjct: 560 ITFIACGSTYSAALS---------SNGELYTWGRG---NYGRLGHGNSDDVMVPTLVSAL 607
Query: 169 ----ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLD 222
I V+CGS + ++ G++ +WG +YG+LGRG C G + P+++ K LD
Sbjct: 608 NGHMIVYVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRG-GCNGSKTPKIVD---KLLD 663
Query: 223 EAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVAL 280
+ +V CG SAA++ GEVYTWG G +LGH G++E + P+ + AL
Sbjct: 664 -----INVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLGH-----GNEEHVRYPKAIEAL 713
Query: 281 DGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL--GLGPQTRSFSLIPNES 331
+K++ G +H ALT +Y WG + GQ+ LG +L P S
Sbjct: 714 KTKKVKELCVGSLHVLALTEDQLVYGWGRNDYGQIDPALGTIVSEPTLCPTLS 766
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 138/305 (45%), Gaps = 45/305 (14%)
Query: 107 KVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST---SRLWVWGQN--------QGSNF 155
K K +++ S+S A + E + + T S ++VWG N +GS
Sbjct: 2871 KRKTYENQLATSVSFLASDWEIVQEQASSQRGVETPQHSAVYVWGLNDKDQLGGLKGSKI 2930
Query: 156 PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGI---TCEGLQGPR 212
+ ++ GS + +S+ G L A G G+LG G CE P+
Sbjct: 2931 KLPVYSESLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDGNACE----PK 2986
Query: 213 VIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKEL 272
I ++++ ++K+ V G H+ A++++G V++WG G G+LGH + S DK
Sbjct: 2987 PIPFLSQYV-----IKKVA-VHSGGKHALALTQDGRVFSWGEGEDGKLGHGNCSSLDK-- 3038
Query: 273 LPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESD 332
PR + +L I+DVACG HS A+TS G LY WG + G+LG G D
Sbjct: 3039 -PRLIESLKSKRIRDVACGSGHSAAITSSGELYTWGLGEYGRLGHG-------------D 3084
Query: 333 TYFRNIPILV---VPNGVQLVACG--HSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWY 387
T + P LV V V VACG + T+ DG ++ WG +G+ S +
Sbjct: 3085 TNTQLKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYT 3144
Query: 388 PSPVD 392
P VD
Sbjct: 3145 PLLVD 3149
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 149/362 (41%), Gaps = 65/362 (17%)
Query: 103 KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNF---- 155
++P++V +FV I+ G H A + S ++ WG G
Sbjct: 493 QYPQRVYGFSDKFVAMIASHPDGKHYLALTED----------SSVYSWGNGDGGRLGHGD 542
Query: 156 ------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQ 209
P+L N I ++CGS + ALS G L WG YG+LG G + +
Sbjct: 543 RTWYEEPKLIESLVDKN--ITFIACGSTYSAALSSNGELYTWGRGNYGRLGHG-NSDDVM 599
Query: 210 GPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGH--CSL 265
P ++ + I V+CG + + V+ +G V++WG G G+LG C+
Sbjct: 600 VPTLVSALNGHM--------IVYVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGCN- 650
Query: 266 QSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
G K P+ V L I + V CGG S ALT+ G +Y WG +A +LG G
Sbjct: 651 --GSKT--PKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLGHG------- 699
Query: 326 LIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYA 385
NE + + V+ + G H L D ++GWG N YGQ T
Sbjct: 700 ---NEEHVRYPKAIEALKTKKVKELCVGSLHVLALTEDQLVYGWGRNDYGQIDPALGTIV 756
Query: 386 WYPSPVDWCVGE-VRKLAAGGGHS--------AVLADACSLKELCE--FRLAESVTLSNA 434
P+ G+ V L G S +V + + ++CE FRL +++ LS A
Sbjct: 757 SEPTLCPTLSGKNVIGLVCGPTQSFAWCTSAWSVASRVAFVVDICEDTFRLLDTL-LSKA 815
Query: 435 SE 436
E
Sbjct: 816 CE 817
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 141/344 (40%), Gaps = 40/344 (11%)
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI- 139
G ++ WG N GQLG K P + L + ++ G A+ DG +
Sbjct: 3896 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTA----DGKVY 3951
Query: 140 -----STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
+ RL + G + P L V+ G H +ALS G + +WG
Sbjct: 3952 ATGYGAVGRLGIGGTD-SVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEG 4010
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+ G+LG G R+ K ++E E I V+CG +HSAA++ G +YTWG
Sbjct: 4011 DDGKLG--------HGNRLSYDRPKLIEELLGTE-IVDVACGGHHSAAITSAGWLYTWGK 4061
Query: 255 GSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGS 310
G G+LGH GD E L P+ V AL + DVACG + +T +++WG
Sbjct: 4062 GRYGRLGH-----GDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDG 4116
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWG 370
G+LG G + ES + GV V CG ++ R G I+ WG
Sbjct: 4117 DYGKLGRGGSDGCKVPMKIES----------LAGLGVIKVECGSQFSVALTRSGSIYTWG 4166
Query: 371 YNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
Y + + + P V G ++ +A G H +D
Sbjct: 4167 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSD 4210
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 129/300 (43%), Gaps = 36/300 (12%)
Query: 133 RENDGTIS---TSRLWVWGQNQGSNFPRLFWGAFTPNTIIC---------QVSCGSVHVV 180
R D T+S + ++ WG N L GA ++C Q++ G +
Sbjct: 3884 RPEDWTLSWDGSGAIYGWGHNHRGQLGGL-EGAKVKLPVLCESLSALRPVQLTGGEQTLF 3942
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
A++ G + A GY G+LG G T + + P +++ K V+ G H
Sbjct: 3943 AVTADGKVYATGYGAVGRLGIGGT-DSVMMPTLLESIQHVF------VKKVAVNSGGKHC 3995
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
A+S G VY+WG G G+LGH + S D+ P+ + L G I DVACGG HS A+TS
Sbjct: 3996 LALSSEGHVYSWGEGDDGKLGHGNRLSYDR---PKLIEELLGTEIVDVACGGHHSAAITS 4052
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVAC--GHSHTL 358
G LY WG + G+LG G + E+ ++ I VAC G + TL
Sbjct: 4053 AGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVID----------VACGSGDAQTL 4102
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADACSL 417
D + WG YG+ S P ++ G V K+ G S L + S+
Sbjct: 4103 CVTDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVIKVECGSQFSVALTRSGSI 4162
Score = 38.9 bits (89), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 47/117 (40%), Gaps = 13/117 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG + + G G E +R PK + A + ++ G H A
Sbjct: 679 LTAYGEVYTWGKGEAYRLGH-GNEEHVRYPKAIE-------ALKTKKVKELCVGSLHVLA 730
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-----AHCTAA 128
+ D ++ WG N++GQ+ P L + V + CG A CT+A
Sbjct: 731 LTEDQLVYGWGRNDYGQIDPALGTIVSEPTLCPTLSGKNVIGLVCGPTQSFAWCTSA 787
>gi|384947464|gb|AFI37337.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
Length = 1023
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 122/258 (47%), Gaps = 39/258 (15%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I Q++CG H +ALS+ G L AWG N +GQLG G T P++++ A
Sbjct: 139 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGV-------- 190
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
+ Q+S GE HS A+S +G +Y+WG GQLG +S D P + ALD ++ +
Sbjct: 191 PLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDS---PSLIEALDNQKVEFL 247
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV---VPN 345
ACGG HS LT G L+ +G + GQLG N + R P LV V N
Sbjct: 248 ACGGSHSALLTQDGLLFTFGAGKHGQLG-----------HNSTQNELR--PCLVAELVGN 294
Query: 346 GVQLVACGHSHTLVYMRD-GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL--- 401
V +ACG HTL Y+ D G++ +G GQ N + P PV E KL
Sbjct: 295 RVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNGGTLDQLIPLPVKVSSSEELKLESH 354
Query: 402 --------AAGGGHSAVL 411
AGG S +L
Sbjct: 355 TSEKELIMIAGGNQSILL 372
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 95/185 (51%), Gaps = 19/185 (10%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+KI Q++CG+YHS A+S+ GE++ WG GQLG ++ P+ V L G+ +
Sbjct: 137 KKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG--RTFPSTTTPQIVEHLAGVPLAQ 194
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP--- 344
++ G HS AL+ G +Y+WG ++ GQLGLG T ++ P L+
Sbjct: 195 ISAGEAHSMALSMSGNIYSWGKNEFGQLGLG-------------HTESKDSPSLIEALDN 241
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAA 403
V+ +ACG SH+ + +DG + +G +GQ + + P V VG V ++A
Sbjct: 242 QKVEFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIAC 301
Query: 404 GGGHS 408
G H+
Sbjct: 302 GRWHT 306
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 32/213 (15%)
Query: 62 SRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDG-TEEGRKHPEKVKQLQSEFVKSIS 120
+ + I CG H+ A++ G LF WG N GQLG G T P+ V+ L + IS
Sbjct: 137 KKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLAQIS 196
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQN----------QGSNFPRLFWGAFTPNTIIC 170
G + A++ + ++ WG+N + + P L N +
Sbjct: 197 AGEAHSMALS---------MSGNIYSWGKNEFGQLGLGHTESKDSPSLIEAL--DNQKVE 245
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
++CG H L++ GLL +G ++GQLG T L+ V + ++
Sbjct: 246 FLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGN---------RV 296
Query: 231 TQVSCGEYHSAA-VSENGEVYTWGLGSVGQLGH 262
TQ++CG +H+ A VS+ G+V+++G G GQLG+
Sbjct: 297 TQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGN 329
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 15/190 (7%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G GR Q+ L G P I+ G H+ A++ G
Sbjct: 158 LFAWGQNLHGQLGV-GRTFPSTTTPQIVEHLAGVPLA------QISAGEAHSMALSMSGN 210
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST- 141
+++WG NEFGQLG G E + P ++ L ++ V+ ++CG +A + + DG + T
Sbjct: 211 IYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALLTQ----DGLLFTF 266
Query: 142 --SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYNEYGQ 198
+ G N N R A + Q++CG H +A +S+ G + ++G + GQ
Sbjct: 267 GAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQ 326
Query: 199 LGRGITCEGL 208
LG G T + L
Sbjct: 327 LGNGGTLDQL 336
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD-G 81
++ +G GQ G + +LR L EL G +R IACG HT A SD G
Sbjct: 263 LFTFGAGKHGQLGHNSTQNELR--PCLVAELVG------NRVTQIACGRWHTLAYVSDFG 314
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVK 117
+F++G+ + GQLG+G + P VK SE +K
Sbjct: 315 KVFSFGSGKDGQLGNGGTLDQLIPLPVKVSSSEELK 350
>gi|194767960|ref|XP_001966082.1| GF19414 [Drosophila ananassae]
gi|190622967|gb|EDV38491.1| GF19414 [Drosophila ananassae]
Length = 5087
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 147/310 (47%), Gaps = 53/310 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ G +H A+ DG +F+WG E G+LG G P +V+ L+++ ++ ++CG+ +
Sbjct: 3166 VHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRQVEALRAKKIRDVACGSSHS 3225
Query: 127 AAIAEPRENDGTISTSRLWVW----------GQNQGSNFPRLFWGAFTPNTIICQVSCGS 176
AAI+ S L+ W G N P+L A + QV+CGS
Sbjct: 3226 AAIS---------SQGELYTWGLGEYGRLGHGDNATQLKPKLV--AALAGRRVVQVACGS 3274
Query: 177 --VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
+AL+E G + +WG ++G+LGRG EG P I+ + + Q+
Sbjct: 3275 RDAQTLALTEDGAVFSWGDGDFGKLGRG-GSEGSDTPHEIERLSGI--------GVIQIE 3325
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL-PRRVVALDGIFIKDVACGGV 293
CG S A++ GEV+TWG G +LGH GD+ + P+ + L G + VA G +
Sbjct: 3326 CGAQFSLALTRAGEVWTWGKGDYYRLGH----GGDQHVRKPQPIGGLRGRRVIHVAVGAL 3381
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV---PNGVQLV 350
H A+T G +YAWG + GQ G G +T+ P LV+ V V
Sbjct: 3382 HCLAVTDSGQVYAWGDNDHGQQGSG-------------NTFVNKKPALVIGLDDVFVNRV 3428
Query: 351 ACGHSHTLVY 360
ACG SH++ +
Sbjct: 3429 ACGSSHSIAW 3438
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 136/286 (47%), Gaps = 35/286 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R PK L L G DIACG H+AA+ + G
Sbjct: 4332 VYAWGEGEDGKLGHGNRVSYDR-PK-LVEHLHGMSVA------DIACGSAHSAAITASGQ 4383
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ TWG +G+LG G E + P+ V+ L I+CG+ + +++
Sbjct: 4384 VLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDN------ 4437
Query: 143 RLWVWGQNQ-------GSNFPRLFWGAFTPNTI-ICQVSCGSVHVVALSECGLLQAWGYN 194
+W WG GS+ +L + + + + +V CGS VAL++ G + WG
Sbjct: 4438 -VWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKG 4496
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
++ +LG G + + ++ P+ + A + +KI ++ G H A S++GEVYTWG
Sbjct: 4497 DFHRLGHG-SVDHVRRPKKVA--------ALQGKKIISIATGSLHCVACSDSGEVYTWGD 4547
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
GQLG ++ + + PR V AL G I V CG H+ AL++
Sbjct: 4548 NDEGQLGDGTVTAIQR---PRLVSALQGKHIVKVTCGSAHTLALST 4590
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 133/286 (46%), Gaps = 41/286 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G G L P+Q+ A + D+ACG H+AA++S G
Sbjct: 3182 VFSWGEGEDGKLGH-GNRTTLDKPRQVE-------ALRAKKIRDVACGSSHSAAISSQGE 3233
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ V L V ++CG+ +A DG +
Sbjct: 3234 LYTWGLGEYGRLGHGDNATQLKPKLVAALAGRRVVQVACGSRDAQTLA--LTEDGAV--- 3288
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+ WG +F +L G+ TP+ I + Q+ CG+ +AL+ G + W
Sbjct: 3289 --FSWGDG---DFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTW 3343
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G + ++ P+ I G ++ V+ G H AV+++G+VY
Sbjct: 3344 GKGDYYRLGHGGD-QHVRKPQPIGGLRG--------RRVIHVAVGALHCLAVTDSGQVYA 3394
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
WG GQ G + K P V+ LD +F+ VACG HS A
Sbjct: 3395 WGDNDHGQQGSGNTFVNKK---PALVIGLDDVFVNRVACGSSHSIA 3437
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 173/410 (42%), Gaps = 62/410 (15%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S IY WG+NH GQ G G E RI P C A + R + +A G + AV D
Sbjct: 4224 STIYGWGHNHRGQLG--GLEGS-RIKTPTP-----CEALSLLRPVQLAGGEQSLFAVTPD 4275
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDG 137
G LF G G+LG G + P + LQ FVK ++ G HC A E
Sbjct: 4276 GKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTE------ 4329
Query: 138 TISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
++ WG+ + P+L + ++CGS H A++ G
Sbjct: 4330 ----GEVYAWGEGEDGKLGHGNRVSYDRPKLV--EHLHGMSVADIACGSAHSAAITASGQ 4383
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSE 245
+ WG YG+LG G + + L+ P++++ + + ++C G+ + +++
Sbjct: 4384 VLTWGKGRYGRLGHGDSEDQLR-PKLVEALLGY--------RAIDIACGSGDAQTLCITD 4434
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+ V++WG G G+LG D LP ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4435 DDNVWSWGDGDYGKLGR---GGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVY 4491
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRD 363
WG +LG G S + R + G ++ +A G H +
Sbjct: 4492 TWGKGDFHRLGHG------------SVDHVRRPKKVAALQGKKIISIATGSLHCVACSDS 4539
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
G ++ WG N GQ + T P V G+ + K+ G H+ L+
Sbjct: 4540 GEVYTWGDNDEGQLGDGTVTAIQRPRLVSALQGKHIVKVTCGSAHTLALS 4589
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 167/408 (40%), Gaps = 70/408 (17%)
Query: 23 IYVWGYNHSGQTG-RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+ VWG N Q G KG + ++ Q L R + IA G + V+ +G
Sbjct: 3076 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRL---------RPIHIAGGSKSLFIVSQEG 3126
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
+F G G+LG G P ++ L VK ++ G H A DG
Sbjct: 3127 RVFACGEGTNGRLGLGVTYNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTL-----DG- 3180
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+++ WG+ + PR I V+CGS H A+S G L
Sbjct: 3181 ----KVFSWGEGEDGKLGHGNRTTLDKPRQVEALRAKK--IRDVACGSSHSAAISSQGEL 3234
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAVSEN 246
WG EYG+LG G L+ P+++ A ++ QV+CG + + A++E+
Sbjct: 3235 YTWGLGEYGRLGHGDNATQLK-PKLVAALAG--------RRVVQVACGSRDAQTLALTED 3285
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
G V++WG G G+LG + D P + L GI + + CG S ALT G ++
Sbjct: 3286 GAVFSWGDGDFGKLGRGGSEGSDT---PHEIERLSGIGVIQIECGAQFSLALTRAGEVWT 3342
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDG 364
WG +LG G D + R + G ++ VA G H L G
Sbjct: 3343 WGKGDYYRLGHG------------GDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDSG 3390
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE----VRKLAAGGGHS 408
+++ WG N +GQ + + P+ V +G V ++A G HS
Sbjct: 3391 QVYAWGDNDHGQQGSGNTFVNKKPALV---IGLDDVFVNRVACGSSHS 3435
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 114/258 (44%), Gaps = 33/258 (12%)
Query: 69 CGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
C H A+ S+ ++WGA E +LG G R P K+ L+ V+S+ CG +A
Sbjct: 638 CEGRHFMAIDSNHNAYSWGAGEDHRLGHGDTHARAVPTKIAALEQHCVQSVFCGCTYSAV 697
Query: 129 IAEPRENDGTISTSRLWVWGQNQGSN----------FPRLFWGAFTPNTIICQVSCGSVH 178
I L WG+ + P L + + G H
Sbjct: 698 IT---------CGGNLLTWGRGTYARLGHGNSDDRCLPTLVAALAEHTVVDVALGSGDAH 748
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
+AL+ GL+ AWG +YG+LG G C G P +++ L ++ ++ G
Sbjct: 749 SLALTSEGLVFAWGDGDYGKLGNG-NCNGSLQPILVE----------SLPRVQRIFAGSQ 797
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKEL-LPRRVVALDGIFIKDVACGGVHSCA 297
+S A+S G+VYTWG + LGH ++ + +PR V +L I D+A G H A
Sbjct: 798 YSVALSSEGQVYTWGKATC--LGHQLVERSVQGCSVPRLVSSLQHKRIVDMAVGVAHCLA 855
Query: 298 LTSKGALYAWGGSQAGQL 315
L+S G ++ WG + Q+
Sbjct: 856 LSSSGEVFGWGRNDCQQV 873
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 112/239 (46%), Gaps = 42/239 (17%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHE--HT 74
I ++ +Y WG G+ G QL+ P+L AG R + +ACG T
Sbjct: 3228 ISSQGELYTWGLGEYGRLGHGDNATQLK------PKLVAALAG--RRVVQVACGSRDAQT 3279
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
A+ DG +F+WG +FG+LG G EG P ++++L V I CGA + A+ E
Sbjct: 3280 LALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGE 3339
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALS 183
+W WG+ ++ RL G P I + V+ G++H +A++
Sbjct: 3340 ---------VWTWGKG---DYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVT 3387
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
+ G + AWG N++GQ G G T + P ++ G LD+ + +V+CG HS A
Sbjct: 3388 DSGQVYAWGDNDHGQQGSGNTFVN-KKPALVIG----LDDV----FVNRVACGSSHSIA 3437
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 90/201 (44%), Gaps = 30/201 (14%)
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
C H +A+ +WG E +LG G T R + L++ + V
Sbjct: 638 CEGRHFMAIDSNHNAYSWGAGEDHRLGHGDT-----HARAVPTKIAALEQ----HCVQSV 688
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG- 292
CG +SA ++ G + TWG G+ +LGH + D LP V AL + DVA G
Sbjct: 689 FCGCTYSAVITCGGNLLTWGRGTYARLGH---GNSDDRCLPTLVAALAEHTVVDVALGSG 745
Query: 293 -VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQL 349
HS ALTS+G ++AWG G+LG G S PILV +P VQ
Sbjct: 746 DAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQ-------------PILVESLPR-VQR 791
Query: 350 VACGHSHTLVYMRDGRIHGWG 370
+ G +++ +G+++ WG
Sbjct: 792 IFAGSQYSVALSSEGQVYTWG 812
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 99/251 (39%), Gaps = 43/251 (17%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ QV C V+ LS+ G L AW ++ E P G+ F+ A
Sbjct: 589 VKQVVCSENQVLLLSQEGKLHAWRLSKP---------EAEPQPLEEAGHETFISIAGH-- 637
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIK 286
C H A+ N Y+WG G +LGH GD +P ++ AL+ ++
Sbjct: 638 ------CEGRHFMAIDSNHNAYSWGAGEDHRLGH-----GDTHARAVPTKIAALEQHCVQ 686
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
V CG +S +T G L WG +LG G N D R +P LV
Sbjct: 687 SVFCGCTYSAVITCGGNLLTWGRGTYARLGHG----------NSDD---RCLPTLVAALA 733
Query: 347 VQLVA-----CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL 401
V G +H+L +G + WG YG+ N + P V+ + V+++
Sbjct: 734 EHTVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVE-SLPRVQRI 792
Query: 402 AAGGGHSAVLA 412
AG +S L+
Sbjct: 793 FAGSQYSVALS 803
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 25/145 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ G H+ A+ S+G +F WG ++G+LG+G G P V+ L V+ I G+ +
Sbjct: 742 LGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPR--VQRIFAGSQYS 799
Query: 127 AAIAEPRENDGTISTSRLWVWGQN------------QGSNFPRLFWGAFTPNTIICQVSC 174
A++ S +++ WG+ QG + PRL + + I ++
Sbjct: 800 VALS---------SEGQVYTWGKATCLGHQLVERSVQGCSVPRLV--SSLQHKRIVDMAV 848
Query: 175 GSVHVVALSECGLLQAWGYNEYGQL 199
G H +ALS G + WG N+ Q+
Sbjct: 849 GVAHCLALSSSGEVFGWGRNDCQQV 873
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 33/70 (47%)
Query: 63 RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG 122
R + +A G H AV G ++ WG N+ GQ G G K P V L FV ++CG
Sbjct: 3372 RVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDDVFVNRVACG 3431
Query: 123 AHCTAAIAEP 132
+ + A P
Sbjct: 3432 SSHSIAWGLP 3441
>gi|357613847|gb|EHJ68745.1| hypothetical protein KGM_02265 [Danaus plexippus]
Length = 1039
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 177/392 (45%), Gaps = 50/392 (12%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISCGAHC 125
I+ G HT ++++G L+T G+NE GQLG T P V + + +I+CG
Sbjct: 40 ISAGEFHTLYLSNNGHLYTCGSNEVGQLGRQTNSADGTSPVLVDTFKGCTLSTIACGLQH 99
Query: 126 TAAIAE--PRENDGTISTSRLWVWGQNQGS---NFPRLFWGAFTPNTIICQVSCGSVHVV 180
+ A+ E + G+ S +L G N GS + P++ T N I QV+CGS H V
Sbjct: 100 SMALDEWGQPFSWGSDSMGQL---GSNLGSHAQDKPKIIKTLATKNVI--QVACGSYHTV 154
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
L+ G L AWG N YGQ G G P+ + I ++CG H+
Sbjct: 155 VLTNNGDLYAWGANSYGQCGLGNRSNKETTPQALSSILGI--------PIALIACGSNHT 206
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
A+S++G V+ WG S GQLG LQ + P + L + + ++CG + LT
Sbjct: 207 FALSQSGAVFGWGKNSHGQLG---LQDRESRCYPTHLKTLRNVKVCHISCGEDFTAFLTL 263
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
G ++ G + GQ G G N D + ++ + V VACG H L
Sbjct: 264 DGGVFTCGAGEYGQTGHG----------NTKDELVPRKVMELMGSTVTQVACGRRHMLCR 313
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVR-----------KLAAGGGHSA 409
+ + RI GY + GQ +A P+PV + + K+ AGG HS
Sbjct: 314 VGE-RILACGYGARGQLGCPHMAFALVPTPVTFTPNDESPFSPEIFSGPVKVFAGGDHSF 372
Query: 410 VLADACSLKELCEFRLAES----VTLSNASEI 437
++ + S K + R+A++ ++LSNA +
Sbjct: 373 LILN--SEKSPADSRVADASKQILSLSNAKLV 402
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 109/222 (49%), Gaps = 21/222 (9%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I Q+S G H + LS G L G NE GQLGR P ++ +
Sbjct: 37 IQQISAGEFHTLYLSNNGHLYTCGSNEVGQLGRQTNSADGTSPVLVDTFKGC-------- 88
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG-HCSLQSGDKELLPRRVVALDGIFIKD 287
++ ++CG HS A+ E G+ ++WG S+GQLG + + DK P+ + L +
Sbjct: 89 TLSTIACGLQHSMALDEWGQPFSWGSDSMGQLGSNLGSHAQDK---PKIIKTLATKNVIQ 145
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
VACG H+ LT+ G LYAWG + GQ GLG ++ N+ T IL +P +
Sbjct: 146 VACGSYHTVVLTNNGDLYAWGANSYGQCGLGNRS-------NKETTPQALSSILGIP--I 196
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPS 389
L+ACG +HT + G + GWG NS+GQ + YP+
Sbjct: 197 ALIACGSNHTFALSQSGAVFGWGKNSHGQLGLQDRESRCYPT 238
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 150/339 (44%), Gaps = 62/339 (18%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ GR+ P L GC IACG +H+ A+ G
Sbjct: 56 LYTCGSNEVGQLGRQTNSADGTSPV-LVDTFKGCTLST------IACGLQHSMALDEWGQ 108
Query: 83 LFTWGANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
F+WG++ GQLG + P+ +K L ++ V ++CG++ T + N+G
Sbjct: 109 PFSWGSDSMGQLGSNLGSHAQDKPKIIKTLATKNVIQVACGSYHTVVLT----NNGD--- 161
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECG 186
L+ WG N SN TP + I ++CGS H ALS+ G
Sbjct: 162 --LYAWGANSYGQCGLGNRSN------KETTPQALSSILGIPIALIACGSNHTFALSQSG 213
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ WG N +GQL GLQ R + Y L + K+ +SCGE +A ++ +
Sbjct: 214 AVFGWGKNSHGQL-------GLQD-RESRCYPTHLKTLRNV-KVCHISCGEDFTAFLTLD 264
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
G V+T G G GQ GH + + EL+PR+V+ L G + VACG H + L A
Sbjct: 265 GGVFTCGAGEYGQTGHGNTKD---ELVPRKVMELMGSTVTQVACGRRHMLCRVGERIL-A 320
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
G GQLG P +F+L+P P+ PN
Sbjct: 321 CGYGARGQLGC-PHM-AFALVPT---------PVTFTPN 348
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 92/198 (46%), Gaps = 17/198 (8%)
Query: 221 LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL 280
L + E I Q+S GE+H+ +S NG +YT G VGQLG + S D P V
Sbjct: 28 LSKWKESSHIQQISAGEFHTLYLSNNGHLYTCGSNEVGQLGRQT-NSADGT-SPVLVDTF 85
Query: 281 DGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG--LGPQTRSFSLIPNESDTYFRNI 338
G + +ACG HS AL G ++WG GQLG LG + I I
Sbjct: 86 KGCTLSTIACGLQHSMALDEWGQPFSWGSDSMGQLGSNLGSHAQDKPKI----------I 135
Query: 339 PILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ-AANEKSTYAWYPSPVDWCVG- 396
L N +Q VACG HT+V +G ++ WG NSYGQ +S P + +G
Sbjct: 136 KTLATKNVIQ-VACGSYHTVVLTNNGDLYAWGANSYGQCGLGNRSNKETTPQALSSILGI 194
Query: 397 EVRKLAAGGGHSAVLADA 414
+ +A G H+ L+ +
Sbjct: 195 PIALIACGSNHTFALSQS 212
>gi|157127963|ref|XP_001661249.1| hect E3 ubiquitin ligase [Aedes aegypti]
gi|108882309|gb|EAT46534.1| AAEL002306-PA [Aedes aegypti]
Length = 4837
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 176/402 (43%), Gaps = 99/402 (24%)
Query: 21 SAIYVWGYNHSGQTG-RKGRERQL----RIPKQLPP-----------------ELFGCPA 58
S + VWG N Q G KG + +L + QL P +L+ C
Sbjct: 2892 SKVLVWGLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYACGE 2951
Query: 59 GANSRW------------------------LDIACGHEHTAAVASDGTLFTWGANEFGQL 94
G N R + + G +H A+ DG +F+WG E G+L
Sbjct: 2952 GTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKL 3011
Query: 95 GDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSN 154
G G + P+ ++ L+++ V+ I+CG+ +AAI S+ L+ WG +
Sbjct: 3012 GHGNRLTLEKPKLIESLRTKRVRDIACGSSHSAAIT---------SSGELYTWGLGE--- 3059
Query: 155 FPRLFWG----AFTPNTI-------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGR 201
+ RL G P + + QV+CGS + L+E GL+ +WG ++G+LGR
Sbjct: 3060 YGRLGHGDNCTQLKPKLVTTLQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGR 3119
Query: 202 GITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG 261
G EG P ++ + Q+ CG S A++++GEV+TWG G +LG
Sbjct: 3120 G-GSEGCSVPHQVERLNSV--------GVMQIECGAQFSLALTKSGEVWTWGKGDYYRLG 3170
Query: 262 HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQT 321
H + Q K P + L G + VA G +H A+T G +YAWG + GQ G G
Sbjct: 3171 HGTDQHVRK---PTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSG--- 3224
Query: 322 RSFSLIPNESDTYFRNIPILVV-PNGVQL--VACGHSHTLVY 360
+T P LV+ +GV + VACG SH++ +
Sbjct: 3225 ----------NTVVNKKPNLVLGLDGVFVNRVACGSSHSVAW 3256
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 150/329 (45%), Gaps = 51/329 (15%)
Query: 47 KQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPE 106
+ + P+ F G + + C +H ++S +++WGA + G+LG G ++HP
Sbjct: 553 ENIAPKAFEGLEGVHVVQIAAHCEGKHVMVLSSANEVWSWGAGDGGRLGHGDTVSKEHPT 612
Query: 107 KVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPN 166
+ L + V I CGA +AAI E L+ WG+ + RL G
Sbjct: 613 MIVGLHEKQVCGIYCGASYSAAITIAGE---------LFTWGRG---TYGRLGHGNSDDK 660
Query: 167 TIICQVSC-------------GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV 213
+ QV G H + +++ GLL AWG ++G+LG G +C G P
Sbjct: 661 LVPTQVQALKSYKVVDVALGSGDAHSMCVTDNGLLFAWGDGDFGKLGNG-SCNGSPIPVQ 719
Query: 214 IKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL 273
I L ++++ G S A+S +G +YTWG G G+LGH + + + +
Sbjct: 720 ID----------TLVNVSRIYSGSQFSVALSCDGTLYTWGKGHGGRLGHGNSEHSN---V 766
Query: 274 PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDT 333
P+ V AL+G I DVA G H ALTS G LY WG + Q+ +R D
Sbjct: 767 PKLVRALEGKKIADVAVGSAHCLALTSSGELYGWGRNDYQQICPSGVSR---------DP 817
Query: 334 YFRNIPILVVPNGVQL--VACGHSHTLVY 360
+ PIL P +++ + CG + ++V+
Sbjct: 818 IIHS-PILTTPPTLRISGMTCGAAQSIVW 845
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 132/286 (46%), Gaps = 35/286 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G R+ R P+L +G +DIACG H+A + S G
Sbjct: 4045 VFSWGEGEDGKLGHGNRDSYDR------PKLIEALSGIGV--IDIACGSAHSACITSQGH 4096
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ TWG +G+LG G E + P+ V+ L I+CG+ + +++
Sbjct: 4097 VLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDN------ 4150
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
+W WG R G P I + +V CGS VAL+ G + WG
Sbjct: 4151 -VWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKG 4209
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G T + ++ P+ + A + +KI ++ G H A S++GEV+TWG
Sbjct: 4210 DYHRLGHGNT-DHVRRPKKVA--------ALQGKKIISIATGSLHCVACSDSGEVFTWGD 4260
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
GQLG ++ + + PR V +L G I V CG H+ AL++
Sbjct: 4261 NDEGQLGDGTVTAIQR---PRLVQSLQGKHIVKVICGSAHTLALST 4303
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 120/265 (45%), Gaps = 31/265 (11%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ G +H A++SDG +F+WG E G+LG G + P+ ++ L V I+CG+ +
Sbjct: 4029 VNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIEALSGIGVIDIACGSAHS 4088
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGS 176
A I S + WG+ + P+L I G
Sbjct: 4089 ACIT---------SQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGD 4139
Query: 177 VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG 236
+ +++ + +WG +YG+LGRG +G + P I+ A + +V CG
Sbjct: 4140 AQTLCITDDDNVWSWGDGDYGKLGRG-GSDGCKIPMKIESLAGL--------GVIKVECG 4190
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSC 296
S A++ +G VYTWG G +LGH + D P++V AL G I +A G +H
Sbjct: 4191 SQFSVALTRSGSVYTWGKGDYHRLGH---GNTDHVRRPKKVAALQGKKIISIATGSLHCV 4247
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQT 321
A + G ++ WG + GQLG G T
Sbjct: 4248 ACSDSGEVFTWGDNDEGQLGDGTVT 4272
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 114/452 (25%), Positives = 190/452 (42%), Gaps = 73/452 (16%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S I+ WG+NH GQ G R +++P C A + R + IA G + AV D
Sbjct: 3937 STIFGWGHNHRGQLGGLDGSR-IKMPTP-------CEALSLLRPIQIAGGEQTLYAVTPD 3988
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDG 137
G L+ G G+LG G + P V+ LQ +K ++ G HC A +DG
Sbjct: 3989 GKLYATGYGAGGRLGIGGTDSVSAPTLVESLQHVIIKKVAVNSGGKHCLAL-----SSDG 4043
Query: 138 TISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
+ + WG+ + P+L I ++CGS H ++ G
Sbjct: 4044 EV-----FSWGEGEDGKLGHGNRDSYDRPKLIEALSGIGVI--DIACGSAHSACITSQGH 4096
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSE 245
+ WG YG+LG G + + LQ P++++ + + ++C G+ + +++
Sbjct: 4097 VLTWGKGRYGRLGHGDSEDQLQ-PKLVEALLGY--------RAIDIACGSGDAQTLCITD 4147
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+ V++WG G G+LG D +P ++ +L G+ + V CG S ALT G++Y
Sbjct: 4148 DDNVWSWGDGDYGKLGR---GGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGSVY 4204
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRD 363
WG +LG G + + R + G ++ +A G H +
Sbjct: 4205 TWGKGDYHRLGHG------------NTDHVRRPKKVAALQGKKIISIATGSLHCVACSDS 4252
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADACSLKELCE 422
G + WG N GQ + T P V G+ + K+ G H+ L+
Sbjct: 4253 GEVFTWGDNDEGQLGDGTVTAIQRPRLVQSLQGKHIVKVICGSAHTLALS---------T 4303
Query: 423 FRLAESVTLSNASEIE-DVASRTGSEAL-ARL 452
++L+E+V + +E D+ E L ARL
Sbjct: 4304 YQLSEAVRPPPSPPLEYDLVRDISPEVLHARL 4335
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 133/290 (45%), Gaps = 30/290 (10%)
Query: 134 ENDGTISTS--RLWVWGQNQGSNF-PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
EN+ I T+ +++ N N P+ F G + + C HV+ LS + +
Sbjct: 532 ENNIYILTTGGQVFSLHSNSSENIAPKAFEGLEGVHVVQIAAHCEGKHVMVLSSANEVWS 591
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG + G+LG G T + P +I G + +++ + CG +SAA++ GE++
Sbjct: 592 WGAGDGGRLGHGDTVSK-EHPTMIVGLHE--------KQVCGIYCGASYSAAITIAGELF 642
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWG 308
TWG G+ G+LGH + D +L+P +V AL + DVA G HS +T G L+AWG
Sbjct: 643 TWGRGTYGRLGH---GNSDDKLVPTQVQALKSYKVVDVALGSGDAHSMCVTDNGLLFAWG 699
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHG 368
G+LG G + + S IP + DT V + G ++ DG ++
Sbjct: 700 DGDFGKLGNG--SCNGSPIPVQIDTLV----------NVSRIYSGSQFSVALSCDGTLYT 747
Query: 369 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
WG G+ + S ++ P V G ++ +A G H L + L
Sbjct: 748 WGKGHGGRLGHGNSEHSNVPKLVRALEGKKIADVAVGSAHCLALTSSGEL 797
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 108/239 (45%), Gaps = 42/239 (17%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHE--HT 74
I + +Y WG G+ G QL+ P+L G R + +ACG T
Sbjct: 3046 ITSSGELYTWGLGEYGRLGHGDNCTQLK------PKLVTTLQG--HRVVQVACGSRDAQT 3097
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
+ +G +F+WG +FG+LG G EG P +V++L S V I CGA + A+ + E
Sbjct: 3098 LCLTEEGLVFSWGDGDFGKLGRGGSEGCSVPHQVERLNSVGVMQIECGAQFSLALTKSGE 3157
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALS 183
+W WG+ ++ RL G P I + V+ G++H +A++
Sbjct: 3158 ---------VWTWGKG---DYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVT 3205
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
+ G + AWG N++GQ G G T + P ++ G + +V+CG HS A
Sbjct: 3206 DSGQVYAWGDNDHGQQGSGNTVVN-KKPNLVLGLDGVF--------VNRVACGSSHSVA 3255
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 190 AWGYNEYGQLGRGITCEGLQGPRV-IKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG N+ QLG GL+G +V + Y+ L + K ++ G VS++G+
Sbjct: 2896 VWGLNDKEQLG------GLKGSKVKLPTYSSVLSQL----KPIHIAGGSKSLFIVSQDGK 2945
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHSCALTSKGALYA 306
+Y G G+ G+LG L + PR+V L+ +K VA GG H+ ALT G +++
Sbjct: 2946 LYACGEGTNGRLG---LGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFS 3002
Query: 307 WGGSQAGQLGLGPQT--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 364
WG + G+LG G + LI + R+I ACG SH+ G
Sbjct: 3003 WGEGEDGKLGHGNRLTLEKPKLIESLRTKRVRDI------------ACGSSHSAAITSSG 3050
Query: 365 RIHGWGYNSYGQ 376
++ WG YG+
Sbjct: 3051 ELYTWGLGEYGR 3062
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 105/249 (42%), Gaps = 29/249 (11%)
Query: 165 PNTI-ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDE 223
P+T+ + QV+C ++ L+ G + + N + EGL+G V++ A
Sbjct: 520 PSTLQVRQVACTENNIYILTTGGQVFSLHSNSSENIAPK-AFEGLEGVHVVQIAAH---- 574
Query: 224 APELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
C H +S EV++WG G G+LGH S + P +V L
Sbjct: 575 -----------CEGKHVMVLSSANEVWSWGAGDGGRLGHGDTVSKEH---PTMIVGLHEK 620
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
+ + CG +S A+T G L+ WG G+LG G L+P + ++ ++ V
Sbjct: 621 QVCGIYCGASYSAAITIAGELFTWGRGTYGRLGHG--NSDDKLVPTQVQA-LKSYKVVDV 677
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 403
G G +H++ +G + WG +G+ N + P +D V V ++ +
Sbjct: 678 ALG-----SGDAHSMCVTDNGLLFAWGDGDFGKLGNGSCNGSPIPVQIDTLVN-VSRIYS 731
Query: 404 GGGHSAVLA 412
G S L+
Sbjct: 732 GSQFSVALS 740
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 87/210 (41%), Gaps = 37/210 (17%)
Query: 214 IKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE-L 272
I Y+ E P ++ QV+C E + ++ G+V+ SL S E +
Sbjct: 509 IPRYSAATIELPSTLQVRQVACTENNIYILTTGGQVF-------------SLHSNSSENI 555
Query: 273 LPRRVVALDGIFIKDVA--CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNE 330
P+ L+G+ + +A C G H L+S +++WG G+LG G
Sbjct: 556 APKAFEGLEGVHVVQIAAHCEGKHVMVLSSANEVWSWGAGDGGRLGHG------------ 603
Query: 331 SDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWY 387
DT + P ++V V + CG S++ G + WG +YG+ + S
Sbjct: 604 -DTVSKEHPTMIVGLHEKQVCGIYCGASYSAAITIAGELFTWGRGTYGRLGHGNSDDKLV 662
Query: 388 PSPVD----WCVGEVRKLAAGGGHSAVLAD 413
P+ V + V +V L +G HS + D
Sbjct: 663 PTQVQALKSYKVVDV-ALGSGDAHSMCVTD 691
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%)
Query: 63 RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG 122
+ + +A G H AV G ++ WG N+ GQ G G K P V L FV ++CG
Sbjct: 3190 KVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTVVNKKPNLVLGLDGVFVNRVACG 3249
Query: 123 AHCTAAIAEPR 133
+ + A + P+
Sbjct: 3250 SSHSVAWSLPQ 3260
>gi|308802742|ref|XP_003078684.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
gi|116057137|emb|CAL51564.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
Length = 419
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 167/375 (44%), Gaps = 63/375 (16%)
Query: 68 ACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTA 127
A G H+ +A G +F G N +GQLG G + L E V+ ++ G + T
Sbjct: 72 AAGGAHSIFLAHGGFVFACGLNNYGQLGHGKHSAHVPEAALVDLDVEVVR-VAAGNNHTL 130
Query: 128 AIAEPRENDGTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI--------ICQVSCGSVH 178
+ + DG + W +G+N+G L F P I I V+ G+ H
Sbjct: 131 CV----DVDGGV-----WAFGKNEGGQLGTGLDLDGFQPRRIETLALEGKIVDVASGAEH 181
Query: 179 VVALSECGLLQAWGYNEYGQLGRGI----------TCEGLQGPRVIKGYAKFLDEAPELE 228
+ALSE + +WG + G LG G T + + PR+++ ++
Sbjct: 182 SLALSEDARVYSWGTSADGVLGHGSETWNEGWFYRTAKTVAKPRLLRALSE--------T 233
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
K+ ++ G HSA V E GE++TWG G QLG S + D E P+ V L F+ V
Sbjct: 234 KVRSIAAGHMHSACVDERGELFTWGQGRFNQLGQTS-KYVDHETAPKSVDTLR--FVHQV 290
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
CGG+H+ A TS G + +WG +Q G+LG G + + S IP PI + G
Sbjct: 291 TCGGLHTLASTSAGVV-SWGANQHGELGHGSNSDAKSAIPK---------PIKLSSRGWS 340
Query: 349 LVACGHSHTLVYMRDGRIHGWGY-NSYGQAANEKSTYA-----------WYPSPVDWCVG 396
++ G H+ DG++ WG+ S G ++EK + W P+ V W G
Sbjct: 341 KLSAGWKHSAGVSNDGKLFAWGFGGSVGSHSDEKLSSGGQLGLGNDFDYWEPTEV-WLPG 399
Query: 397 EVRKLAAGGGHSAVL 411
+ ++ G H+ L
Sbjct: 400 DAVGVSCGFNHTLAL 414
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 158/373 (42%), Gaps = 72/373 (19%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ G N+ GQ G + +P+ +L + + +A G+ HT V DG
Sbjct: 87 VFACGLNNYGQLGHG--KHSAHVPEAALVDL-------DVEVVRVAAGNNHTLCVDVDGG 137
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSE-FVKSISCGAHCTAAIAEPRE------- 134
++ +G NE GQLG G + P +++ L E + ++ GA + A++E
Sbjct: 138 VWAFGKNEGGQLGTGLDLDGFQPRRIETLALEGKIVDVASGAEHSLALSEDARVYSWGTS 197
Query: 135 -----NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQ 189
G+ + + W + + PRL T + ++ G +H + E G L
Sbjct: 198 ADGVLGHGSETWNEGWFYRTAKTVAKPRLL--RALSETKVRSIAAGHMHSACVDERGELF 255
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDE--APE----LEKITQVSCGEYHSAAV 243
WG + QLG+ +K++D AP+ L + QV+CG H+ A
Sbjct: 256 TWGQGRFNQLGQ---------------TSKYVDHETAPKSVDTLRFVHQVTCGGLHTLAS 300
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+ G V +WG G+LGH S S K +P+ + L ++ G HS +++ G
Sbjct: 301 TSAG-VVSWGANQHGELGHGS-NSDAKSAIPKP-IKLSSRGWSKLSAGWKHSAGVSNDGK 357
Query: 304 LYAWGG------------SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVA 351
L+AWG S GQLGLG N+ D Y+ + +P V+
Sbjct: 358 LFAWGFGGSVGSHSDEKLSSGGQLGLG----------NDFD-YWEPTEVW-LPGDAVGVS 405
Query: 352 CGHSHTLVYMRDG 364
CG +HTL +R G
Sbjct: 406 CGFNHTLALVRLG 418
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 117/302 (38%), Gaps = 64/302 (21%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG----------ITCEGLQGPRV----- 213
+ Q + G H + L+ G + A G N YGQLG G + ++ RV
Sbjct: 68 VTQCAAGGAHSIFLAHGGFVFACGLNNYGQLGHGKHSAHVPEAALVDLDVEVVRVAAGNN 127
Query: 214 ---------------------------IKGYAKFLDEAPELE-KITQVSCGEYHSAAVSE 245
+ G+ E LE KI V+ G HS A+SE
Sbjct: 128 HTLCVDVDGGVWAFGKNEGGQLGTGLDLDGFQPRRIETLALEGKIVDVASGAEHSLALSE 187
Query: 246 NGEVYTWGLGSVGQLGHCS--------LQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
+ VY+WG + G LGH S ++ PR + AL ++ +A G +HS
Sbjct: 188 DARVYSWGTSADGVLGHGSETWNEGWFYRTAKTVAKPRLLRALSETKVRSIAAGHMHSAC 247
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT 357
+ +G L+ WG + QLG + P DT V V CG HT
Sbjct: 248 VDERGELFTWGQGRFNQLGQTSKYVDHETAPKSVDTL----------RFVHQVTCGGLHT 297
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKSTYA--WYPSPVDWCVGEVRKLAAGGGHSAVLADAC 415
L G + WG N +G+ + ++ A P P+ KL+AG HSA +++
Sbjct: 298 LASTSAGVV-SWGANQHGELGHGSNSDAKSAIPKPIKLSSRGWSKLSAGWKHSAGVSNDG 356
Query: 416 SL 417
L
Sbjct: 357 KL 358
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 74/168 (44%), Gaps = 18/168 (10%)
Query: 253 GLGSVGQLGHCSLQSGDKELLPRR-----VVALDGIFIKDVACGGVHSCALTSKGALYAW 307
G G G+LGH + + D V L+ + + A GG HS L G ++A
Sbjct: 31 GNGDFGRLGHGQVLTDDDVSFRSSNYFHPVRGLEDVDVTQCAAGGAHSIFLAHGGFVFAC 90
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G + GQLG G + + +P + ++ + VV VA G++HTL DG +
Sbjct: 91 GLNNYGQLGHGKHS---AHVP---EAALVDLDVEVVR-----VAAGNNHTLCVDVDGGVW 139
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCV--GEVRKLAAGGGHSAVLAD 413
+G N GQ + P ++ G++ +A+G HS L++
Sbjct: 140 AFGKNEGGQLGTGLDLDGFQPRRIETLALEGKIVDVASGAEHSLALSE 187
>gi|405965978|gb|EKC31310.1| Putative E3 ubiquitin-protein ligase HERC2 [Crassostrea gigas]
Length = 5345
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 151/309 (48%), Gaps = 52/309 (16%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ G H+ A+ +DG +F+WG + G+LG + P ++ L+S+ V+ I+CG+ +
Sbjct: 3557 VHSGGRHSLALTTDGKVFSWGEGDDGKLGHFSRWNCDKPRLIEALKSKRVRDIACGSSHS 3616
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCG 175
AAI S L+ WG + + RL G T P + + QV+CG
Sbjct: 3617 AAIT---------SNGDLYTWGLGE---YGRLGHGDNTTQLKPKQVKALAHERVVQVACG 3664
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S +AL++ G + +WG ++G+LGRG G +G V + D +K+ Q+
Sbjct: 3665 SRDAQTLALTDEGKVYSWGDGDFGKLGRG----GSEGCNVPHEVDRLRD-----QKVCQI 3715
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G+V+TWG G +LGH + K P+ V L G I VA G +
Sbjct: 3716 ECGAQFSLALTKSGQVWTWGKGDYFRLGHGTDAHVRK---PQIVEGLKGKKIVHVAVGAL 3772
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VA 351
H A+T G ++AWG + GQ G G T P LVV G ++ VA
Sbjct: 3773 HCLAVTDSGQVFAWGDNDHGQQGNGTTT-------------VNRKPALVVLEGYKISKVA 3819
Query: 352 CGHSHTLVY 360
CG SH++ +
Sbjct: 3820 CGSSHSIAW 3828
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 133/267 (49%), Gaps = 38/267 (14%)
Query: 72 EHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
+H + SDG +F+WG + G+LG G + + P + L + V I CG+ + A+
Sbjct: 629 KHYMGLTSDGEVFSWGNGDGGKLGHGDYQNHEEPALITGLSGKQVAKICCGSSYSVALT- 687
Query: 132 PRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-----------ICQVSCGS--VH 178
S ++ WG+ NF RL G+ T I V+CGS
Sbjct: 688 --------SNGEVYSWGKG---NFGRLGHGSSEDQTTPMLLKFFKGHRIVDVACGSGDAQ 736
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
+A+++ G + +WG +YG+LGRG +G + P+VI+ + + +V CG
Sbjct: 737 TLAVTDSGAVYSWGDGDYGKLGRGGN-DGCKTPKVIEKLMG--------QDVVRVYCGNQ 787
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
S A++++G VYTWG G +LGH + D P+++ AL +KD+A G +H A+
Sbjct: 788 FSMALTKSGAVYTWGKGDNYRLGH---GTEDHARHPKQIEALSSKKVKDIAIGSLHCMAI 844
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFS 325
T G LY WG ++ GQLG P +F+
Sbjct: 845 TEDGELYGWGRNEQGQLG-NPSISNFT 870
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 156/342 (45%), Gaps = 50/342 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A+ +Y WG G+ G R R P + G +DIA G H+A
Sbjct: 4563 LSAEGEVYSWGEGEDGKLGHGNRSPCDR------PRVIDSLRGKEV--VDIAAGGAHSAC 4614
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G E + P+ V+ L+S V ++CG+ + +++
Sbjct: 4615 ITANGELYTWGKGRYGRLGHGDSEDQPRPKLVEALKSYRVVDMACGSGDAQTLCITDDDN 4674
Query: 137 GTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
+W WG R G P I + +V CGS VAL++ G +
Sbjct: 4675 -------VWSWGDGDYGKLGRGGSDGCKVPMKIETLQGQGVMKVECGSQFSVALTKSGSV 4727
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG +Y +LG G + + ++ PR + A + +K+ V+CG H A ++ GE
Sbjct: 4728 YTWGKGDYHRLGHG-SDDHVRRPRKV--------SALQNKKVIDVACGSLHCVACTDTGE 4778
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
V++WG GQLG + + + PR V +L G I VACG HS AW
Sbjct: 4779 VFSWGDNDEGQLGDGTTNAIQR---PRLVASLLGKKINRVACGSAHS---------LAWS 4826
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
++A G P S IP E + + +NIPI + N + L+
Sbjct: 4827 TNKAVSAGKLP-----SDIPMEYN-HLQNIPITALRNRLILL 4862
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 135/285 (47%), Gaps = 40/285 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G R + P L A + R DIACG H+AA+ S+G
Sbjct: 3573 VFSWGEGDDGKLGHFSRWNCDK------PRLI--EALKSKRVRDIACGSSHSAAITSNGD 3624
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P++VK L E V ++CG+ +A E
Sbjct: 3625 LYTWGLGEYGRLGHGDNTTQLKPKQVKALAHERVVQVACGSRDAQTLALTDEG------- 3677
Query: 143 RLWVWGQ----------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
+++ WG ++G N P + +CQ+ CG+ +AL++ G + WG
Sbjct: 3678 KVYSWGDGDFGKLGRGGSEGCNVPHEV--DRLRDQKVCQIECGAQFSLALTKSGQVWTWG 3735
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
+Y +LG G T ++ P++++G +KI V+ G H AV+++G+V+ W
Sbjct: 3736 KGDYFRLGHG-TDAHVRKPQIVEGLKG--------KKIVHVAVGALHCLAVTDSGQVFAW 3786
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
G GQ G+ + K L V L+G I VACG HS A
Sbjct: 3787 GDNDHGQQGNGTTTVNRKPAL----VVLEGYKISKVACGSSHSIA 3827
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 173/408 (42%), Gaps = 64/408 (15%)
Query: 20 KSAIYVWGYNHSGQTG-RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
++ ++ WG N Q G KG + +L P L + R + I G + V
Sbjct: 3463 QTNVFCWGLNDKDQLGGPKGSKIKL-------PTLNDNLSAL--RCVQIVGGSKSLFCVT 3513
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKH-PEKVKQLQSEFVKSISC---GAHCTAAIAEPRE 134
+G ++ G G+LG G G P ++ L +K ++ G H A
Sbjct: 3514 QEGKVYACGEATNGRLGLGITTGTVSVPRQITSLSQYVIKKVAVHSGGRHSLALT----- 3568
Query: 135 NDGTISTSRLWVWGQNQGS---NFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSE 184
DG +++ WG+ +F R W P I + ++CGS H A++
Sbjct: 3569 TDG-----KVFSWGEGDDGKLGHFSR--WNCDKPRLIEALKSKRVRDIACGSSHSAAITS 3621
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAA 242
G L WG EYG+LG G L+ P+ +K A E++ QV+CG + + A
Sbjct: 3622 NGDLYTWGLGEYGRLGHGDNTTQLK-PKQVKALAH--------ERVVQVACGSRDAQTLA 3672
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
+++ G+VY+WG G G+LG + + +P V L + + CG S ALT G
Sbjct: 3673 LTDEGKVYSWGDGDFGKLGRGGSEGCN---VPHEVDRLRDQKVCQIECGAQFSLALTKSG 3729
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLVY 360
++ WG +LG G +D + R I+ G ++V A G H L
Sbjct: 3730 QVWTWGKGDYFRLGHG------------TDAHVRKPQIVEGLKGKKIVHVAVGALHCLAV 3777
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
G++ WG N +GQ N +T P+ V ++ K+A G HS
Sbjct: 3778 TDSGQVFAWGDNDHGQQGNGTTTVNRKPALVVLEGYKISKVACGSSHS 3825
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 169/407 (41%), Gaps = 68/407 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
I+ WG+NH GQ G + ++ P C A A +R + + G + AV ++G
Sbjct: 4463 IWGWGHNHRGQLGGVDGAK-VKQP-------VSCEALAVTRPIQLVGGEQTLFAVTAEGK 4514
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGTI 139
+F G G+LG G E HP +++ +Q F+K ++ G HC A AE
Sbjct: 4515 VFATGYGAGGRLGVGGTESVSHPTQLESIQHVFIKKLAVNSGGKHCLALSAE-------- 4566
Query: 140 STSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQ 189
++ WG+ + PR+ + ++ G H ++ G L
Sbjct: 4567 --GEVYSWGEGEDGKLGHGNRSPCDRPRVIDSLRGKEVV--DIAAGGAHSACITANGELY 4622
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSENG 247
WG YG+LG G E P++++ + ++ ++C G+ + ++++
Sbjct: 4623 TWGKGRYGRLGHG-DSEDQPRPKLVEALKSY--------RVVDMACGSGDAQTLCITDDD 4673
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
V++WG G G+LG D +P ++ L G + V CG S ALT G++Y W
Sbjct: 4674 NVWSWGDGDYGKLGR---GGSDGCKVPMKIETLQGQGVMKVECGSQFSVALTKSGSVYTW 4730
Query: 308 GGSQAGQLGLGP-----QTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
G +LG G + R S + N+ V VACG H +
Sbjct: 4731 GKGDYHRLGHGSDDHVRRPRKVSALQNKK---------------VIDVACGSLHCVACTD 4775
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
G + WG N GQ + + P V +G ++ ++A G HS
Sbjct: 4776 TGEVFSWGDNDEGQLGDGTTNAIQRPRLVASLLGKKINRVACGSAHS 4822
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 116/240 (48%), Gaps = 45/240 (18%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHE--HT 74
I + +Y WG G+ G QL+ PKQ+ A A+ R + +ACG T
Sbjct: 3619 ITSNGDLYTWGLGEYGRLGHGDNTTQLK-PKQV-------KALAHERVVQVACGSRDAQT 3670
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
A+ +G +++WG +FG+LG G EG P +V +L+ + V I CGA + A+ +
Sbjct: 3671 LALTDEGKVYSWGDGDFGKLGRGGSEGCNVPHEVDRLRDQKVCQIECGAQFSLALTK--- 3727
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALS 183
+ ++W WG+ ++ RL G P + I V+ G++H +A++
Sbjct: 3728 ------SGQVWTWGKG---DYFRLGHGTDAHVRKPQIVEGLKGKKIVHVAVGALHCLAVT 3778
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVI-KGYAKFLDEAPELEKITQVSCGEYHSAA 242
+ G + AWG N++GQ G G T + V+ +GY KI++V+CG HS A
Sbjct: 3779 DSGQVFAWGDNDHGQQGNGTTTVNRKPALVVLEGY-----------KISKVACGSSHSIA 3827
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 101/213 (47%), Gaps = 24/213 (11%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ ++ CGS + VAL+ G + +WG +G+LG G + E P ++K +
Sbjct: 673 VAKICCGSSYSVALTSNGEVYSWGKGNFGRLGHG-SSEDQTTPMLLKFFKG--------H 723
Query: 229 KITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
+I V+CG + + AV+++G VY+WG G G+LG D P+ + L G +
Sbjct: 724 RIVDVACGSGDAQTLAVTDSGAVYSWGDGDYGKLGR---GGNDGCKTPKVIEKLMGQDVV 780
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
V CG S ALT GA+Y WG +LG G T + P + + +
Sbjct: 781 RVYCGNQFSMALTKSGAVYTWGKGDNYRLGHG--TEDHARHPKQIEA--------LSSKK 830
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAAN 379
V+ +A G H + DG ++GWG N GQ N
Sbjct: 831 VKDIAIGSLHCMAITEDGELYGWGRNEQGQLGN 863
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 115/239 (48%), Gaps = 25/239 (10%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H + L+ G + +WG + G+LG G + + P +I G + +++ ++ CG
Sbjct: 630 HYMGLTSDGEVFSWGNGDGGKLGHG-DYQNHEEPALITGLSG--------KQVAKICCGS 680
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHS 295
+S A++ NGEVY+WG G+ G+LGH S + + P + G I DVACG +
Sbjct: 681 SYSVALTSNGEVYSWGKGNFGRLGH---GSSEDQTTPMLLKFFKGHRIVDVACGSGDAQT 737
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS 355
A+T GA+Y+WG G+LG G N+ + I L+ + V+ V CG+
Sbjct: 738 LAVTDSGAVYSWGDGDYGKLGRGG---------NDGCKTPKVIEKLMGQDVVR-VYCGNQ 787
Query: 356 HTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVD-WCVGEVRKLAAGGGHSAVLAD 413
++ + G ++ WG + + +A +P ++ +V+ +A G H + +
Sbjct: 788 FSMALTKSGAVYTWGKGDNYRLGHGTEDHARHPKQIEALSSKKVKDIAIGSLHCMAITE 846
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 86/177 (48%), Gaps = 20/177 (11%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG G+ GR G + + PK + +L G + + CG++ + A+ G
Sbjct: 745 AVYSWGDGDYGKLGRGGND-GCKTPKVIE-KLMGQDV------VRVYCGNQFSMALTKSG 796
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
++TWG + +LG GTE+ +HP++++ L S+ VK I+ G+ AI E DG
Sbjct: 797 AVYTWGKGDNYRLGHGTEDHARHPKQIEALSSKKVKDIAIGSLHCMAITE----DG---- 848
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQ 198
L+ WG+N+ FT T+I + ++ VA CG Q + + GQ
Sbjct: 849 -ELYGWGRNEQGQLGNPSISNFTEPTLIGGMEGKNIIGVA---CGPTQTFAWTSGGQ 901
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 83/196 (42%), Gaps = 28/196 (14%)
Query: 221 LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL 280
+D ++ + Q++C E +S+ G+VY S+ GD+E++ R+ +
Sbjct: 568 MDFFADIGGVQQIACSERCCLILSKAGKVYMLYYTSLSPTLQQLNGFGDREVI--RIAS- 624
Query: 281 DGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI 340
G H LTS G +++WG G+LG G D P
Sbjct: 625 --------HPDGKHYMGLTSDGEVFSWGNGDGGKLGHG-------------DYQNHEEPA 663
Query: 341 LVV-PNGVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG- 396
L+ +G Q+ + CG S+++ +G ++ WG ++G+ + S P + + G
Sbjct: 664 LITGLSGKQVAKICCGSSYSVALTSNGEVYSWGKGNFGRLGHGSSEDQTTPMLLKFFKGH 723
Query: 397 EVRKLAAGGGHSAVLA 412
+ +A G G + LA
Sbjct: 724 RIVDVACGSGDAQTLA 739
>gi|195482069|ref|XP_002101897.1| GE17877 [Drosophila yakuba]
gi|194189421|gb|EDX03005.1| GE17877 [Drosophila yakuba]
Length = 2660
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 161/351 (45%), Gaps = 53/351 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G +G+ G G + +P QLP + + + G +H A+ DG
Sbjct: 786 VYACGEGTNGRLGL-GVTHNVPLPHQLP-----VLHQYVVKKVAVHSGGKHALALTLDGK 839
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F+WG E G+LG G P V+ L+++ ++ ++CG+ +AAI+ S
Sbjct: 840 VFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAIS---------SQG 890
Query: 143 RLWVWGQNQ------GSNFPRLFWGAFT--PNTIICQVSCGS--VHVVALSECGLLQAWG 192
L+ WG + G N +L T + QV+CGS +AL+E G + +WG
Sbjct: 891 ELYTWGLGEYGRLGHGDNATQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWG 950
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
++G+LGRG EG P I+ + + Q+ CG S A++ GEV+TW
Sbjct: 951 DGDFGKLGRG-GSEGSDTPHEIERLSGI--------GVVQIECGAQFSLALTRAGEVWTW 1001
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G G +LGH Q K P+ + L G + VA G +H A+T G +YAWG +
Sbjct: 1002 GKGDYYRLGHGGDQHVRK---PQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDH 1058
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVY 360
GQ G G +T+ P LV+ V VACG SH++ +
Sbjct: 1059 GQQGSG-------------NTFVNKKPALVIGLDAVFVNRVACGSSHSIAW 1096
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 136/286 (47%), Gaps = 35/286 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R PK L L G DIACG H+AA+ + G
Sbjct: 1905 VYAWGEGEDGKLGHGNRMSYDR-PK-LVEHLNGMSVA------DIACGSAHSAAITASGH 1956
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ TWG +G+LG G E + P+ V+ L I+CG+ + +++
Sbjct: 1957 VLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDN------ 2010
Query: 143 RLWVWGQNQ-------GSNFPRLFWGAFTPNTI-ICQVSCGSVHVVALSECGLLQAWGYN 194
+W WG GS+ +L + + + + +V CGS VAL++ G + WG
Sbjct: 2011 -VWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKG 2069
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
++ +LG G + + ++ P+ + A + +KI ++ G H A S++GEVYTWG
Sbjct: 2070 DFHRLGHG-SVDHVRRPKKVA--------ALQGKKIISIATGSLHCVACSDSGEVYTWGD 2120
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
GQLG ++ + + PR V AL G I V CG H+ AL++
Sbjct: 2121 NDEGQLGDGTVTAIQR---PRLVAALQGKHIVKVTCGSAHTLALST 2163
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 163/410 (39%), Gaps = 92/410 (22%)
Query: 11 ARPVDNIPAKSAIYVWGYNHSGQTG-RKGRERQLRIPKQLPPELFGCPAGANSRWLDIAC 69
A P ++P + VWG N Q G KG + ++ Q L R + IA
Sbjct: 724 AAPEQDLPC--TVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRL---------RPIHIAG 772
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAI 129
G + V+ DG ++ G G+LG G P ++ L VK ++
Sbjct: 773 GSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVA--------- 823
Query: 130 AEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQ 189
V G H +AL+ G +
Sbjct: 824 ------------------------------------------VHSGGKHALALTLDGKVF 841
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
+WG E G+LG G L PR++ EA +KI V+CG HSAA+S GE+
Sbjct: 842 SWGEGEDGKLGHGNRTT-LDKPRLV--------EALRAKKIRDVACGSSHSAAISSQGEL 892
Query: 250 YTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALY 305
YTWGLG G+LGH GD +L P+ V AL G + VACG + ALT GA++
Sbjct: 893 YTWGLGEYGRLGH-----GDNATQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVF 947
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
+WG G+LG G S + P+E + I GV + CG +L R G
Sbjct: 948 SWGDGDFGKLGRGGSEGSDT--PHEIE-RLSGI-------GVVQIECGAQFSLALTRAGE 997
Query: 366 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADA 414
+ WG Y + + + P P+ G V +A G H + DA
Sbjct: 998 VWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDA 1047
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 139/320 (43%), Gaps = 45/320 (14%)
Query: 51 PELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQ 110
P L G + + + G +H A+ ++G ++ WG E G+LG G P+ V+
Sbjct: 1873 PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEH 1932
Query: 111 LQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFW 160
L V I+CG+ +AAI ++ + WG+ + P+L
Sbjct: 1933 LNGMSVADIACGSAHSAAIT---------ASGHVLTWGKGRYGRLGHGDSEDQLRPKLVE 1983
Query: 161 GAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF 220
I G + +++ + +WG +YG+LGRG +G + P I+ A
Sbjct: 1984 ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG-GSDGCKLPYKIESLAGL 2042
Query: 221 LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL 280
+ +V CG S A++++G VYTWG G +LGH S+ D P++V AL
Sbjct: 2043 --------GVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSV---DHVRRPKKVAAL 2091
Query: 281 DGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI 340
G I +A G +H A + G +Y WG + GQLG G + T + +
Sbjct: 2092 QGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDG------------TVTAIQRPRL 2139
Query: 341 LVVPNGVQL--VACGHSHTL 358
+ G + V CG +HTL
Sbjct: 2140 VAALQGKHIVKVTCGSAHTL 2159
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 173/410 (42%), Gaps = 62/410 (15%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S IY WG+NH GQ G G E RI P C A + R + +A G + AV D
Sbjct: 1797 STIYGWGHNHRGQLG--GLEGS-RIKTPTP-----CEALSLLRPVQLAGGEQSLFAVTPD 1848
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI---SCGAHCTAAIAEPRENDG 137
G LF G G+LG G + P + LQ FVK + S G HC A E
Sbjct: 1849 GKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTE------ 1902
Query: 138 TISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
++ WG+ + P+L + ++CGS H A++ G
Sbjct: 1903 ----GEVYAWGEGEDGKLGHGNRMSYDRPKLV--EHLNGMSVADIACGSAHSAAITASGH 1956
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSE 245
+ WG YG+LG G + + L+ P++++ + + ++C G+ + +++
Sbjct: 1957 VLTWGKGRYGRLGHGDSEDQLR-PKLVEALLGY--------RAIDIACGSGDAQTLCITD 2007
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+ V++WG G G+LG D LP ++ +L G+ + V CG S ALT GA+Y
Sbjct: 2008 DDNVWSWGDGDYGKLGR---GGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVY 2064
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRD 363
WG +LG G S + R + G ++ +A G H +
Sbjct: 2065 TWGKGDFHRLGHG------------SVDHVRRPKKVAALQGKKIISIATGSLHCVACSDS 2112
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
G ++ WG N GQ + T P V G+ + K+ G H+ L+
Sbjct: 2113 GEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 2162
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 49/112 (43%), Gaps = 12/112 (10%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA--NSRWLDIACGHEHTAAVASD 80
++ WG + G G ++ +R P+ P G R + +A G H AV
Sbjct: 998 VWTWGKGDYYRLGHGG-DQHVRKPQ---------PIGGLRGRRVIHVAVGALHCLAVTDA 1047
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
G ++ WG N+ GQ G G K P V L + FV ++CG+ + A P
Sbjct: 1048 GQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIAWGLP 1099
>gi|297841169|ref|XP_002888466.1| hypothetical protein ARALYDRAFT_475695 [Arabidopsis lyrata subsp.
lyrata]
gi|297334307|gb|EFH64725.1| hypothetical protein ARALYDRAFT_475695 [Arabidopsis lyrata subsp.
lyrata]
Length = 1005
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 146/330 (44%), Gaps = 52/330 (15%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
I+ G +H A V G +F WG G+LG HP++V+ L+ V+S++C H T
Sbjct: 296 ISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNIDIDHPKRVESLEDVAVRSVACSDHQT 355
Query: 127 AAIAEPRENDGTISTSRLWVWG------QNQGSNF-PRLFWGAFTPNTIICQVSCGSVHV 179
A+ E E L++WG + GS F R + I V+CG+ H
Sbjct: 356 CAVTESGE---------LYLWGIDGGTIEQSGSQFLTRKISDVLGGSLSIFSVACGAWHT 406
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
++ G L +G +G LG G + E + P+ ++ + K+ VSCG +H
Sbjct: 407 AMVTSSGQLFTYGSRTFGVLGHG-SLESVTKPKEVESLRRM--------KVISVSCGPWH 457
Query: 240 SAAVSEN------------GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL-DGIFIK 286
+AA+ E G+++TWG G G+LGH ++L+P V L D FIK
Sbjct: 458 TAAIVETAIDRKFYNAKSCGKLFTWGDGDKGRLGHA---DNKRKLVPTCVTELIDHDFIK 514
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
V+CG + AL+ G +Y G S GQLG P D + +
Sbjct: 515 -VSCGWTLTVALSVSGTVYTMGSSIHGQLG----------CPRAKDKSINVVLGNLTRQF 563
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
V+ +A G H V G ++ WG + GQ
Sbjct: 564 VKDIASGSHHVAVLTSFGNVYTWGKGTNGQ 593
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 111/238 (46%), Gaps = 23/238 (9%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
+ACG HTA V S G LFT+G+ FG LG G+ E P++V+ L+ V S+SCG
Sbjct: 397 FSVACGAWHTAMVTSSGQLFTYGSRTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPW 456
Query: 125 CTAAIAEP---RENDGTISTSRLWVWGQ------NQGSNFPRLFWGAFTP--NTIICQVS 173
TAAI E R+ S +L+ WG N +L T + +VS
Sbjct: 457 HTAAIVETAIDRKFYNAKSCGKLFTWGDGDKGRLGHADNKRKLVPTCVTELIDHDFIKVS 516
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
CG VALS G + G + +GQLG C PR + + + +
Sbjct: 517 CGWTLTVALSVSGTVYTMGSSIHGQLG----C-----PRAKDKSINVVLGNLTRQFVKDI 567
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
+ G +H A ++ G VYTWG G+ GQLG ++ + +L V L ++ +ACG
Sbjct: 568 ASGSHHVAVLTSFGNVYTWGKGTNGQLGLGDVRDRNSPVL---VEPLGDRLVESIACG 622
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 75/157 (47%), Gaps = 18/157 (11%)
Query: 221 LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL 280
L E+ + + +S G H+A V+ GEV+ WG G+ G+LG L+ P+RV +L
Sbjct: 284 LLESATMFDVQSISLGAKHAALVTRQGEVFCWGNGNSGKLG---LKVNIDIDHPKRVESL 340
Query: 281 DGIFIKDVACGGVHSCALTSKGALYAWG--GSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
+ + ++ VAC +CA+T G LY WG G Q G TR S + S + F
Sbjct: 341 EDVAVRSVACSDHQTCAVTESGELYLWGIDGGTIEQSGSQFLTRKISDVLGGSLSIFS-- 398
Query: 339 PILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
VACG HT + G++ +G ++G
Sbjct: 399 -----------VACGAWHTAMVTSSGQLFTYGSRTFG 424
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 38/69 (55%)
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
DIA G H A + S G ++TWG GQLG G R P V+ L V+SI+CG +
Sbjct: 566 DIASGSHHVAVLTSFGNVYTWGKGTNGQLGLGDVRDRNSPVLVEPLGDRLVESIACGLNL 625
Query: 126 TAAIAEPRE 134
TAAI +E
Sbjct: 626 TAAICLHKE 634
>gi|409911788|ref|YP_006890253.1| lipoprotein [Geobacter sulfurreducens KN400]
gi|298505363|gb|ADI84086.1| ATS1 domain repeat protein [Geobacter sulfurreducens KN400]
Length = 2082
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/341 (30%), Positives = 140/341 (41%), Gaps = 60/341 (17%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A ++ WG N SGQ G G P+Q+ PA A + W +A G HT +
Sbjct: 466 ADGTLWAWGDNSSGQLG-IGSTVAASTPQQI---TVTNPASAGNDWAAVAAGEAHTIGLK 521
Query: 79 SDGTLFTWGANEFGQLGDGT-EEGRKHPEKV-----KQLQSEFVKSISCGAHCTAAIAEP 132
+DGTL+ WG N FGQLGDGT R P ++ +V + G A
Sbjct: 522 ADGTLWAWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFSLA----- 576
Query: 133 RENDGTISTSRLWVWGQNQ---------------GSNFPRLFWGAFTPNTII----CQVS 173
+ DGTI W WG N N P A P+T ++
Sbjct: 577 LQADGTI-----WTWGDNSLLQLGTDPAVLAPATQRNVPAQLAVASPPSTAFNSSWVAIA 631
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
G H +AL G L AWG N GQLG G+T +VI E +
Sbjct: 632 AGQDHGLALQADGTLWAWGANSVGQLGNGVTTATFTPVQVINA---------EGVPYVSL 682
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL-------PRRVVALDGIFIK 286
+ G HS A +G ++ WG + GQLG GD + L P R++ + +
Sbjct: 683 AAGTSHSLAGRSDGTLWAWGNNTSGQLG-TGPHPGDADPLNPQPHTVPARILTSNPVSAA 741
Query: 287 D----VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRS 323
D GG HS AL S G L+ WG + +GQLG G T +
Sbjct: 742 DDWLVATAGGSHSAALKSNGTLWTWGQNTSGQLGNGTTTEA 782
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 118/388 (30%), Positives = 160/388 (41%), Gaps = 73/388 (18%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A ++ WG N +GQ G G + P L AGA S WL + G + +
Sbjct: 364 ANGTVFGWGGNGAGQLG-NGTFGAVTAPTVLS-------AGA-SAWLGVEPGGAFSLGLR 414
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
S+GTL+ WG N GQLGDGT P V + + + AH A A DGT
Sbjct: 415 SNGTLWAWGGNASGQLGDGTTTPSAIPVPVVGDAGNWRTTATGTAHSVAVRA-----DGT 469
Query: 139 ISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTIICQ-----------VSCGSVHVVA 181
LW WG N GS A TP I V+ G H +
Sbjct: 470 -----LWAWGDNSSGQLGIGSTV-----AASTPQQITVTNPASAGNDWAAVAAGEAHTIG 519
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGP-RVIKGYAKFLDEAPELEKITQVSCGEYHS 240
L G L AWG N +GQLG G P +++ G D V+ G S
Sbjct: 520 LKADGTLWAWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFD-----RNWVAVAAGGVFS 574
Query: 241 AAVSENGEVYTWGLGSVGQLGH--CSLQSGDKELLPRRV-------VALDGIFIKDVACG 291
A+ +G ++TWG S+ QLG L + +P ++ A + ++ +A G
Sbjct: 575 LALQADGTIWTWGDNSLLQLGTDPAVLAPATQRNVPAQLAVASPPSTAFNSSWVA-IAAG 633
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV-PNGVQLV 350
H AL + G L+AWG + GQLG G T +F+ P+ V+ GV V
Sbjct: 634 QDHGLALQADGTLWAWGANSVGQLGNGVTTATFT-------------PVQVINAEGVPYV 680
Query: 351 --ACGHSHTLVYMRDGRIHGWGYNSYGQ 376
A G SH+L DG + WG N+ GQ
Sbjct: 681 SLAAGTSHSLAGRSDGTLWAWGNNTSGQ 708
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 172/417 (41%), Gaps = 60/417 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I A +++ WG N GQ G+ QL K P + G + W+ ++ G +
Sbjct: 95 IKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRI-----GTGNDWVAVSAGELTSFG 149
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKV---KQLQSEFVKSISCGAHCTAAIAEPR 133
+ DGTL++WG N FG+LGDGT R P +V +V + G H A
Sbjct: 150 LKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALA-----L 204
Query: 134 ENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQV---------SCGSVHVVALSE 184
+ DGT LW WG N PN ++ S G +H VAL
Sbjct: 205 QADGT-----LWAWGANLTGQLGTGG-TGILPNPTPLKIGTDRDWTAISAGEMHSVALKA 258
Query: 185 CGLLQAWGYNEYGQLGRGITCEG--LQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
G L +WG N +G+LG G+ G + P + + ++ ++ G H+ A
Sbjct: 259 DGSLWSWGQNLFGELGNGVALPGANVTTPTRVGTGSDWV----------AIAAGALHTVA 308
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
+ NG V WG + G +G ++ + L V L + +A G S ++ + G
Sbjct: 309 LHRNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTL--VNNVAIAAGTGVSFSVLANG 366
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL---VACGHSHTLV 359
++ WGG+ AGQLG G T+ V+ G V G + +L
Sbjct: 367 TVFGWGGNGAGQLGNG--------------TFGAVTAPTVLSAGASAWLGVEPGGAFSLG 412
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLADAC 415
+G + WG N+ GQ + +T + P PV G R A G HS AV AD
Sbjct: 413 LRSNGTLWAWGGNASGQLGDGTTTPSAIPVPVVGDAGNWRTTATGTAHSVAVRADGT 469
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 163/398 (40%), Gaps = 61/398 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N SGQ G P +P + G W A G H+ AV +DGT
Sbjct: 419 LWAWGGNASGQLGDG-----TTTPSAIPVPVVGDAG----NWRTTATGTAHSVAVRADGT 469
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+ WG N GQLG G+ P+++ S G A A G +
Sbjct: 470 LWAWGDNSSGQLGIGSTVAASTPQQIT-----VTNPASAGNDWAAVAAGEAHTIGLKADG 524
Query: 143 RLWVWGQNQGSNFPRLFWGA-----FTPNTII-----------CQVSCGSVHVVALSECG 186
LW WG N F +L G TP I+ V+ G V +AL G
Sbjct: 525 TLWAWGDNT---FGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFSLALQADG 581
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGY-AKFLDEAPELEKITQ----VSCGEYHSA 241
+ WG N QLG T + P + A+ +P ++ G+ H
Sbjct: 582 TIWTWGDNSLLQLG---TDPAVLAPATQRNVPAQLAVASPPSTAFNSSWVAIAAGQDHGL 638
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A+ +G ++ WG SVGQLG+ + P +V+ +G+ +A G HS A S
Sbjct: 639 ALQADGTLWAWGANSVGQLGNGVTTA---TFTPVQVINAEGVPYVSLAAGTSHSLAGRSD 695
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYF---RNIPI-LVVPNGVQ-----LVA- 351
G L+AWG + +GQLG GP P ++D +P ++ N V LVA
Sbjct: 696 GTLWAWGNNTSGQLGTGPH-------PGDADPLNPQPHTVPARILTSNPVSAADDWLVAT 748
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPS 389
G SH+ +G + WG N+ GQ N +T A P+
Sbjct: 749 AGGSHSAALKSNGTLWTWGQNTSGQLGNGTTTEADIPT 786
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 120/410 (29%), Positives = 164/410 (40%), Gaps = 59/410 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+ WG N G G + + P L P + + IA G + +V ++GT
Sbjct: 315 VSAWGNNAQGAVGDG------TVANRSTPTLIVAPVTLVNN-VAIAAGTGVSFSVLANGT 367
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F WG N GQLG+GT P + S ++ GA G S
Sbjct: 368 VFGWGGNGAGQLGNGTFGAVTAPTVLSAGASAWLGVEPGGAFSL----------GLRSNG 417
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQV----------SCGSVHVVALSECGLLQAWG 192
LW WG N +L G TP+ I V + G+ H VA+ G L AWG
Sbjct: 418 TLWAWGGNASG---QLGDGTTTPSAIPVPVVGDAGNWRTTATGTAHSVAVRADGTLWAWG 474
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
N GQLG G T P+ I + A V+ GE H+ + +G ++ W
Sbjct: 475 DNSSGQLGIGSTVAA-STPQQI----TVTNPASAGNDWAAVAAGEAHTIGLKADGTLWAW 529
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALD-GIFIKD---VACGGVHSCALTSKGALYAWG 308
G + GQLG + S P ++V + G F ++ VA GGV S AL + G ++ WG
Sbjct: 530 GDNTFGQLGDGTGTS--NRTTPVQIVTGNPGNFDRNWVAVAAGGVFSLALQADGTIWTWG 587
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIP---ILVVPNGVQL------VACGHSHTLV 359
+ QLG P L P RN+P + P +A G H L
Sbjct: 588 DNSLLQLGTDPAV----LAPATQ----RNVPAQLAVASPPSTAFNSSWVAIAAGQDHGLA 639
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
DG + WG NS GQ N +T + P V G LAAG HS
Sbjct: 640 LQADGTLWAWGANSVGQLGNGVTTATFTPVQVINAEGVPYVSLAAGTSHS 689
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 151/382 (39%), Gaps = 82/382 (21%)
Query: 55 GCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSE 114
G PA S +A G H + SDGTL+ G+N+FGQLGDGT R P +V
Sbjct: 25 GAPAAGWSAVPHVAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRTSPVQVPGTW-- 82
Query: 115 FVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTI 168
K+++ G + I + DG+ LW WG N Q +L F+P I
Sbjct: 83 --KTVAAGTTHSLGI----KADGS-----LWAWGSNLFGQLGQPLVNGQLATNKFSPIRI 131
Query: 169 -----ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIK---GYAKF 220
VS G + L G L +WG N +G+LG G T Q +V+ ++
Sbjct: 132 GTGNDWVAVSAGELTSFGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRY 191
Query: 221 LDEA------------------------------------PELEKI------TQVSCGEY 238
+ A P KI T +S GE
Sbjct: 192 VAVAAGGEHALALQADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAISAGEM 251
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGIFIKDVACGGVHSCA 297
HS A+ +G +++WG G+LG+ G P RV D + I A G +H+ A
Sbjct: 252 HSVALKADGSLWSWGQNLFGELGNGVALPGANVTTPTRVGTGSDWVAI---AAGALHTVA 308
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT 357
L G + AWG + G +G G + N S P+ +V N +A G +
Sbjct: 309 LHRNGTVSAWGNNAQGAVGDG-------TVANRSTPTLIVAPVTLVNN--VAIAAGTGVS 359
Query: 358 LVYMRDGRIHGWGYNSYGQAAN 379
+ +G + GWG N GQ N
Sbjct: 360 FSVLANGTVFGWGGNGAGQLGN 381
>gi|242008674|ref|XP_002425127.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
gi|212508801|gb|EEB12389.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
Length = 1044
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 163/349 (46%), Gaps = 34/349 (9%)
Query: 23 IYVWGYNHSGQTGRKGRER-QLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG G+ G G E Q+ P + F + + + G HT + G
Sbjct: 1 MYCWGSTVHGELGLGGIEHDQIFAPIE---HTFKYASNVSQ----VTMGENHTVMLTKSG 53
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F+ G N+ QLG ++ R PEKV+ L + ISCG + T A E + G S
Sbjct: 54 EVFSCGNNDLDQLGH--KKQRTKPEKVEGLDFYRITKISCGGNHTLAFNEWGQLFGWGSD 111
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGR 201
S + P++ T + I Q+SCG H +AL+ G L +WG N GQLG
Sbjct: 112 SHGQLGFNGTTQPLPKIIKSLATFH--IVQISCGKNHSLALTNNGELYSWGGNYDGQLGL 169
Query: 202 GITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG 261
G+ E + P +IK I ++CG HS A+S++G +Y WG + GQLG
Sbjct: 170 GMRSEYEKQPTLIKSLLGI--------PIAFIACGSNHSFALSKSGAIYGWGKNTYGQLG 221
Query: 262 HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQT 321
L + +L P ++ L I +K +ACG S L++ G ++ G GQLG G +
Sbjct: 222 ---LNDEENKLHPTQLKTLRSIRVKYIACGEDFSAFLSADGGVFTCGAGMYGQLGHG--S 276
Query: 322 RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGW 369
S ++P R I + ++ + V V+CG HTL + GR++ +
Sbjct: 277 TSNEILP-------RKI-MELMGSTVTQVSCGKRHTLALVPSRGRVYSF 317
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 126/245 (51%), Gaps = 25/245 (10%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ QV+ G H V L++ G + + G N+ QLG + P ++G +
Sbjct: 36 VSQVTMGENHTVMLTKSGEVFSCGNNDLDQLGHK---KQRTKPEKVEGL--------DFY 84
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
+IT++SCG H+ A +E G+++ WG S GQLG +G + LP+ + +L I +
Sbjct: 85 RITKISCGGNHTLAFNEWGQLFGWGSDSHGQLGF----NGTTQPLPKIIKSLATFHIVQI 140
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
+CG HS ALT+ G LY+WGG+ GQLGLG ++ + T ++ +L +P +
Sbjct: 141 SCGKNHSLALTNNGELYSWGGNYDGQLGLGMRSEY-----EKQPTLIKS--LLGIP--IA 191
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGH 407
+ACG +H+ + G I+GWG N+YGQ +P+ + V+ +A G
Sbjct: 192 FIACGSNHSFALSKSGAIYGWGKNTYGQLGLNDEENKLHPTQLKTLRSIRVKYIACGEDF 251
Query: 408 SAVLA 412
SA L+
Sbjct: 252 SAFLS 256
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 55/112 (49%), Gaps = 8/112 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
AIY WG N GQ G E +L P QL + R IACG + +A +++DG
Sbjct: 208 AIYGWGKNTYGQLGLNDEENKLH-PTQL-------KTLRSIRVKYIACGEDFSAFLSADG 259
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
+FT GA +GQLG G+ P K+ +L V +SCG T A+ R
Sbjct: 260 GVFTCGAGMYGQLGHGSTSNEILPRKIMELMGSTVTQVSCGKRHTLALVPSR 311
>gi|449484061|ref|XP_002195626.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Taeniopygia
guttata]
Length = 526
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 117/233 (50%), Gaps = 24/233 (10%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HVV +E G + WG+N Y QLG G T G +V +K+ +V+CG
Sbjct: 86 HVVLATEEGEVYTWGHNAYSQLGNGTTNHGFVPCQVSTNLVN--------KKVIEVACGS 137
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHSC 296
+HS ++ +GEVYTWG + GQ+G S + + +PRRV + L + ++ACG + S
Sbjct: 138 HHSMVLTSDGEVYTWGYNNSGQVGSGSTAN---QPIPRRVTSCLQNKIVVNIACGQMCSM 194
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G +Y WG + GQLGLG + + R VQ VACG++H
Sbjct: 195 AVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR----------VQRVACGYAH 244
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
TLV +G+I+ WG NSYGQ + YP+ V V + R + HSA
Sbjct: 245 TLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTV--VVDKDRVIEIAACHSA 295
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 139/313 (44%), Gaps = 44/313 (14%)
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTA 127
G+E A +D +F G N G LG G + P ++ L + + +S G+ H
Sbjct: 31 GNEVLYATEND-EVFVLGMNCSGCLGTGDMQSTIEPRRLDSLCGKKIACLSYGSGPHVVL 89
Query: 128 AIAEPRENDGTISTSRLWVWGQNQGSNFPR-LFWGAFTP--------NTIICQVSCGSVH 178
A E ++ WG N S F P N + +V+CGS H
Sbjct: 90 ATEE----------GEVYTWGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHH 139
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
+ L+ G + WGYN GQ+G G T RV + + ++CG+
Sbjct: 140 SMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKI--------VVNIACGQM 191
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
S AV ENGEVY WG GQLG L S + P R+ AL GI ++ VACG H+ L
Sbjct: 192 CSMAVVENGEVYVWGYNGNGQLG---LGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVL 248
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT- 357
T +G +YAWG + GQLG G N+S+ + ++ +++ AC +HT
Sbjct: 249 TDEGQIYAWGANSYGQLGTG----------NKSNQSYPTTVVVDKDRVIEIAACHSAHTS 298
Query: 358 LVYMRDGRIHGWG 370
+ G+++ WG
Sbjct: 299 AAKTQSGQVYMWG 311
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 113/241 (46%), Gaps = 35/241 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG+N Q G G +P Q+ L N + +++ACG H+ + SDG
Sbjct: 96 VYTWGHNAYSQLG-NGTTNHGFVPCQVSTNL------VNKKVIEVACGSHHSMVLTSDGE 148
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
++TWG N GQ+G G+ + P +V LQ++ V +I+CG C+ A+ E E
Sbjct: 149 VYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGE------- 201
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N N P A + +V+CG H + L++ G + AWG
Sbjct: 202 --VYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGA 259
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH-SAAVSENGEVYTW 252
N YGQLG G V+ + ++ A +C H SAA +++G+VY W
Sbjct: 260 NSYGQLGTGNKSNQSYPTTVVVDKDRVIEIA---------ACHSAHTSAAKTQSGQVYMW 310
Query: 253 G 253
G
Sbjct: 311 G 311
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 20/151 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G Q P A R +ACG+ HT + +G
Sbjct: 202 VYVWGYNGNGQLGLGSSGNQ--------PTPCRIAALQGIRVQRVACGYAHTLVLTDEGQ 253
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
++ WGAN +GQLG G + + +P V + ++ +C AH +AA + +
Sbjct: 254 IYAWGANSYGQLGTGNKSNQSYPTTVVVDKDRVIEIAACHSAHTSAAKTQ---------S 304
Query: 142 SRLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
++++WGQ +G + FP L A T + C
Sbjct: 305 GQVYMWGQCRGQSVTFPHLTHFACTDDVFAC 335
>gi|281361147|ref|NP_608388.2| HERC2 [Drosophila melanogaster]
gi|91206848|sp|Q9VR91.3|HERC2_DROME RecName: Full=Probable E3 ubiquitin-protein ligase HERC2; AltName:
Full=HECT domain and RCC1-like domain-containing protein
2
gi|272506184|gb|AAF50913.3| HERC2 [Drosophila melanogaster]
Length = 4912
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 163/352 (46%), Gaps = 55/352 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G +G+ G G + +P QLP + + + G +H A+ DG
Sbjct: 3040 VYACGEGTNGRLGL-GVTHNVPLPHQLP-----VLRQYVVKKVAVHSGGKHALALTLDGK 3093
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F+WG E G+LG G P V+ L+++ ++ ++CG+ +AAI+ S
Sbjct: 3094 VFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAIS---------SQG 3144
Query: 143 RLWVWGQNQ------GSNFPRLFWGAFT--PNTIICQVSCGS--VHVVALSECGLLQAWG 192
L+ WG + G N +L T + QV+CGS +AL+E G + +WG
Sbjct: 3145 ELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWG 3204
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
++G+LGRG EG P I+ + + Q+ CG S A++ GEV+TW
Sbjct: 3205 DGDFGKLGRG-GSEGSDTPHEIERLSGI--------GVVQIECGAQFSLALTRAGEVWTW 3255
Query: 253 GLGSVGQLGHCSLQSGDKELL-PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
G G +LGH GD+ + P+ + L G + VA G +H A+T G +YAWG +
Sbjct: 3256 GKGDYYRLGH----GGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDND 3311
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVY 360
GQ G G +T+ P LV+ V VACG SH++ +
Sbjct: 3312 HGQQGSG-------------NTFVNKKPALVIGLDAVFVNRVACGSSHSIAW 3350
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 136/286 (47%), Gaps = 35/286 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R PK L L G DIACG H+AA+ + G
Sbjct: 4157 VYAWGEGEDGKLGHGNRMSYDR-PK-LVEHLNGMSVA------DIACGSAHSAAITASGH 4208
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ TWG +G+LG G E + P+ V+ L I+CG+ + +++
Sbjct: 4209 VLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDN------ 4262
Query: 143 RLWVWGQNQ-------GSNFPRLFWGAFTPNTI-ICQVSCGSVHVVALSECGLLQAWGYN 194
+W WG GS+ +L + + + + +V CGS VAL++ G + WG
Sbjct: 4263 -VWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKG 4321
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
++ +LG G + + ++ P+ + A + +KI ++ G H A S++GEVYTWG
Sbjct: 4322 DFHRLGHG-SVDHVRRPKKVA--------ALQGKKIISIATGSLHCVACSDSGEVYTWGD 4372
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
GQLG ++ + + PR V AL G I V CG H+ AL++
Sbjct: 4373 NDEGQLGDGTVTAIQR---PRLVAALQGKHIVKVTCGSAHTLALST 4415
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 164/410 (40%), Gaps = 92/410 (22%)
Query: 11 ARPVDNIPAKSAIYVWGYNHSGQTG-RKGRERQLRIPKQLPPELFGCPAGANSRWLDIAC 69
A P ++P + VWG N Q G KG + ++ Q L R + IA
Sbjct: 2978 AAPEQDLPC--TVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRL---------RPIHIAG 3026
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAI 129
G + V+ DG ++ G G+LG G P ++ L+ VK ++
Sbjct: 3027 GSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVA--------- 3077
Query: 130 AEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQ 189
V G H +AL+ G +
Sbjct: 3078 ------------------------------------------VHSGGKHALALTLDGKVF 3095
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
+WG E G+LG G L PR++ EA +KI V+CG HSAA+S GE+
Sbjct: 3096 SWGEGEDGKLGHG-NRTTLDKPRLV--------EALRAKKIRDVACGSSHSAAISSQGEL 3146
Query: 250 YTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALY 305
YTWGLG G+LGH GD +L P+ V AL G + VACG + ALT GA++
Sbjct: 3147 YTWGLGEYGRLGH-----GDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVF 3201
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
+WG G+LG G S + P+E + + GV + CG +L R G
Sbjct: 3202 SWGDGDFGKLGRGGSEGSDT--PHEIER--------LSGIGVVQIECGAQFSLALTRAGE 3251
Query: 366 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADA 414
+ WG Y + + + P P+ G V +A G H + DA
Sbjct: 3252 VWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDA 3301
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 139/320 (43%), Gaps = 45/320 (14%)
Query: 51 PELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQ 110
P L G + + + G +H A+ ++G ++ WG E G+LG G P+ V+
Sbjct: 4125 PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEH 4184
Query: 111 LQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFW 160
L V I+CG+ +AAI ++ + WG+ + P+L
Sbjct: 4185 LNGMSVADIACGSAHSAAIT---------ASGHVLTWGKGRYGRLGHGDSEDQLRPKLVE 4235
Query: 161 GAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF 220
I G + +++ + +WG +YG+LGRG +G + P I+ A
Sbjct: 4236 ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG-GSDGCKLPYKIESLAGL 4294
Query: 221 LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL 280
+ +V CG S A++++G VYTWG G +LGH S+ D P++V AL
Sbjct: 4295 --------GVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSV---DHVRRPKKVAAL 4343
Query: 281 DGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI 340
G I +A G +H A + G +Y WG + GQLG G + T + +
Sbjct: 4344 QGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDG------------TVTAIQRPRL 4391
Query: 341 LVVPNGVQL--VACGHSHTL 358
+ G + V CG +HTL
Sbjct: 4392 VAALQGKHIVKVTCGSAHTL 4411
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 173/410 (42%), Gaps = 62/410 (15%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S IY WG+NH GQ G G E RI P C A + R + +A G + AV D
Sbjct: 4049 STIYGWGHNHRGQLG--GLEGS-RIKTPTP-----CEALSLLRPVQLAGGEQSLFAVTPD 4100
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDG 137
G LF G G+LG G + P + LQ FVK ++ G HC A E
Sbjct: 4101 GKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTE------ 4154
Query: 138 TISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
++ WG+ + P+L + ++CGS H A++ G
Sbjct: 4155 ----GEVYAWGEGEDGKLGHGNRMSYDRPKLV--EHLNGMSVADIACGSAHSAAITASGH 4208
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSE 245
+ WG YG+LG G + + L+ P++++ + + ++C G+ + +++
Sbjct: 4209 VLTWGKGRYGRLGHGDSEDQLR-PKLVEALLGY--------RAIDIACGSGDAQTLCITD 4259
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+ V++WG G G+LG D LP ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4260 DDNVWSWGDGDYGKLGR---GGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVY 4316
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRD 363
WG +LG G S + R + G ++ +A G H +
Sbjct: 4317 TWGKGDFHRLGHG------------SVDHVRRPKKVAALQGKKIISIATGSLHCVACSDS 4364
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
G ++ WG N GQ + T P V G+ + K+ G H+ L+
Sbjct: 4365 GEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4414
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 171/412 (41%), Gaps = 53/412 (12%)
Query: 60 ANSRWLDIA--CGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVK 117
A+ ++ IA C H A+ S+ ++WG E +LG G R P K+ L+ V+
Sbjct: 612 AHDVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQ 671
Query: 118 SISCGAHCTAAIAEPRENDGTISTSRLWVWGQ----------NQGSNFPRLFWGAFTPNT 167
S+ CG +AAI L WG+ + + P L
Sbjct: 672 SVYCGCSYSAAIT---------CGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMV 722
Query: 168 IICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL 227
+ + G H +AL+ GL+ AWG +YG+LG G C G P +++ L
Sbjct: 723 VDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNG-NCNGSLQPILVES----------L 771
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKEL-LPRRVVALDGIFIK 286
++ +V G S A+S G++YTWG + LGH ++ + +PR V +L I
Sbjct: 772 PRVQRVFAGSQFSVALSSEGQLYTWGKATC--LGHQLVERSVQGCSVPRLVSSLQHKRIV 829
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPN 345
DVA H AL+S G ++ WG + + Q + P + S S+ R PILV +P
Sbjct: 830 DVAVSVAHCLALSSSGEVFGWGRNDSQQ--ICPASVS-------SEPLLRT-PILVSLPT 879
Query: 346 -GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAG 404
+AC + +LV+ + G + + T+ + C + +
Sbjct: 880 FPASGIACTSAQSLVWTQSSH-QGVPRRAPFVVDLGEPTFRLLDQLLGMCSSQDNR-QTP 937
Query: 405 GGHSAVLADACSLKELCEFRLAESVTLSNASEIEDVASRTGSEALARLCERL 456
S +A AC L FRL ++N E V +GS L L R+
Sbjct: 938 NQESECIAVAC----LNLFRLQLLALIANGVEPRQVGLASGSRLLCSLKTRI 985
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 80/191 (41%), Gaps = 34/191 (17%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
+I QV+C E +S+ G++YTW L + E LP VA D +FI
Sbjct: 573 QIKQVACCETQMLILSQEGKLYTWRLAK-----------PEAEPLPMEEVAHD-VFISIA 620
Query: 289 A-CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP--- 344
C G H A+ S Y+WG + +LG G DT+ R +P +
Sbjct: 621 GHCEGRHFLAIDSNHNAYSWGTGEDHRLGHG-------------DTHARAVPTKIAALEQ 667
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV----DWCVGEVRK 400
+ VQ V CG S++ G + WG +Y + + S P+ V D V +V
Sbjct: 668 HCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDV-A 726
Query: 401 LAAGGGHSAVL 411
L +G HS L
Sbjct: 727 LGSGDAHSLAL 737
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 34/70 (48%)
Query: 63 RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG 122
R + +A G H AV G ++ WG N+ GQ G G K P V L + FV ++CG
Sbjct: 3284 RVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACG 3343
Query: 123 AHCTAAIAEP 132
+ + A P
Sbjct: 3344 SSHSIAWGLP 3353
>gi|194893471|ref|XP_001977881.1| GG19286 [Drosophila erecta]
gi|190649530|gb|EDV46808.1| GG19286 [Drosophila erecta]
Length = 4908
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 164/357 (45%), Gaps = 65/357 (18%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G +G+ G G + +P QLP + + + G +H A+ DG
Sbjct: 3037 VYACGEGTNGRLGL-GVTHNVPLPHQLP-----VLHQYVVKKVAVHSGGKHALALTLDGK 3090
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F+WG E G+LG G P V+ L+++ ++ ++CG+ +AAI+ S
Sbjct: 3091 VFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAIS---------SQG 3141
Query: 143 RLWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGS--VHVVALSECGL 187
L+ WG + G N +L P + + QV+CGS +AL+E G
Sbjct: 3142 ELYTWGLGEYGRLGHGDNVTQL-----KPKLVVALAGRRVVQVACGSRDAQTLALTEDGA 3196
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ +WG ++G+LGRG EG P I+ + + Q+ CG S A++ G
Sbjct: 3197 VFSWGDGDFGKLGRG-GSEGSDTPHEIERLSGI--------GVVQIECGAQFSLALTRAG 3247
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELL-PRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
EV+TWG G +LGH GD+ + P+ + L G + VA G +H A+T G +YA
Sbjct: 3248 EVWTWGKGDYYRLGH----GGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYA 3303
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVY 360
WG + GQ G G +T+ P LV+ V VACG SH++ +
Sbjct: 3304 WGDNDHGQQGSG-------------NTFVNKKPALVIGLDAVFVNRVACGSSHSIAW 3347
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 164/410 (40%), Gaps = 92/410 (22%)
Query: 11 ARPVDNIPAKSAIYVWGYNHSGQTG-RKGRERQLRIPKQLPPELFGCPAGANSRWLDIAC 69
A P ++P + VWG N Q G KG + ++ Q L R + IA
Sbjct: 2975 AAPEQDLPC--TVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRL---------RPIHIAG 3023
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAI 129
G + V+ DG ++ G G+LG G P ++ L VK ++
Sbjct: 3024 GSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVA--------- 3074
Query: 130 AEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQ 189
V G H +AL+ G +
Sbjct: 3075 ------------------------------------------VHSGGKHALALTLDGKVF 3092
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
+WG E G+LG G L PR++ EA +KI V+CG HSAA+S GE+
Sbjct: 3093 SWGEGEDGKLGHG-NRTTLDKPRLV--------EALRAKKIRDVACGSSHSAAISSQGEL 3143
Query: 250 YTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALY 305
YTWGLG G+LGH GD +L P+ VVAL G + VACG + ALT GA++
Sbjct: 3144 YTWGLGEYGRLGH-----GDNVTQLKPKLVVALAGRRVVQVACGSRDAQTLALTEDGAVF 3198
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
+WG G+LG G S + P+E + I GV + CG +L R G
Sbjct: 3199 SWGDGDFGKLGRGGSEGSDT--PHEIER-LSGI-------GVVQIECGAQFSLALTRAGE 3248
Query: 366 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADA 414
+ WG Y + + + P P+ G V +A G H + DA
Sbjct: 3249 VWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDA 3298
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 136/286 (47%), Gaps = 35/286 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R PK L L G DIACG H+AA+ + G
Sbjct: 4153 VYAWGEGEDGKLGHGNRMSYDR-PK-LVEHLNGMSVA------DIACGSAHSAAITASGH 4204
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ TWG +G+LG G E + P+ V+ L I+CG+ + +++
Sbjct: 4205 VLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDN------ 4258
Query: 143 RLWVWGQNQ-------GSNFPRLFWGAFTPNTI-ICQVSCGSVHVVALSECGLLQAWGYN 194
+W WG GS+ +L + + + + +V CGS VAL++ G + WG
Sbjct: 4259 -VWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKG 4317
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
++ +LG G + + ++ P+ + A + +KI ++ G H A S++GEVYTWG
Sbjct: 4318 DFHRLGHG-SVDHVRRPKKVA--------ALQGKKIISIATGSLHCVACSDSGEVYTWGD 4368
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
GQLG ++ + + PR V AL G I V CG H+ AL++
Sbjct: 4369 NDEGQLGDGTVTAIQR---PRLVAALQGKHIVKVTCGSAHTLALST 4411
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 139/320 (43%), Gaps = 45/320 (14%)
Query: 51 PELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQ 110
P L G + + + G +H A+ ++G ++ WG E G+LG G P+ V+
Sbjct: 4121 PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEH 4180
Query: 111 LQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFW 160
L V I+CG+ +AAI ++ + WG+ + P+L
Sbjct: 4181 LNGMSVADIACGSAHSAAIT---------ASGHVLTWGKGRYGRLGHGDSEDQLRPKLVE 4231
Query: 161 GAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF 220
I G + +++ + +WG +YG+LGRG +G + P I+ A
Sbjct: 4232 ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG-GSDGCKLPYKIESLAGL 4290
Query: 221 LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL 280
+ +V CG S A++++G VYTWG G +LGH S+ D P++V AL
Sbjct: 4291 --------GVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSV---DHVRRPKKVAAL 4339
Query: 281 DGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI 340
G I +A G +H A + G +Y WG + GQLG G + T + +
Sbjct: 4340 QGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDG------------TVTAIQRPRL 4387
Query: 341 LVVPNGVQL--VACGHSHTL 358
+ G + V CG +HTL
Sbjct: 4388 VAALQGKHIVKVTCGSAHTL 4407
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 173/410 (42%), Gaps = 62/410 (15%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S IY WG+NH GQ G G E RI P C A + R + +A G + AV D
Sbjct: 4045 STIYGWGHNHRGQLG--GLEGS-RIKTPTP-----CEALSLLRPVQLAGGEQSLFAVTPD 4096
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDG 137
G LF G G+LG G + P + LQ FVK ++ G HC A E
Sbjct: 4097 GKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTE------ 4150
Query: 138 TISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
++ WG+ + P+L + ++CGS H A++ G
Sbjct: 4151 ----GEVYAWGEGEDGKLGHGNRMSYDRPKLV--EHLNGMSVADIACGSAHSAAITASGH 4204
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSE 245
+ WG YG+LG G + + L+ P++++ + + ++C G+ + +++
Sbjct: 4205 VLTWGKGRYGRLGHGDSEDQLR-PKLVEALLGY--------RAIDIACGSGDAQTLCITD 4255
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+ V++WG G G+LG D LP ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4256 DDNVWSWGDGDYGKLGR---GGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVY 4312
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRD 363
WG +LG G S + R + G ++ +A G H +
Sbjct: 4313 TWGKGDFHRLGHG------------SVDHVRRPKKVAALQGKKIISIATGSLHCVACSDS 4360
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
G ++ WG N GQ + T P V G+ + K+ G H+ L+
Sbjct: 4361 GEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4410
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 171/412 (41%), Gaps = 53/412 (12%)
Query: 60 ANSRWLDIA--CGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVK 117
A+ ++ IA C H A+ S+ ++WG E +LG G R P K+ L+ V+
Sbjct: 609 AHEVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQ 668
Query: 118 SISCGAHCTAAIAEPRENDGTISTSRLWVWGQ----------NQGSNFPRLFWGAFTPNT 167
S+ CG +AAI L WG+ + + P L
Sbjct: 669 SVYCGCSYSAAIT---------CGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMV 719
Query: 168 IICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL 227
+ + G H +AL+ GL+ AWG +YG+LG G C G P +++ L
Sbjct: 720 VDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNG-NCNGSLQPILVES----------L 768
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKEL-LPRRVVALDGIFIK 286
++ +V G S A+S G++Y+WG + LGH ++ + +PR V +L I
Sbjct: 769 PRVQRVFAGSQFSLALSSEGQLYSWGKATC--LGHQLVERSVQGCSVPRLVSSLQHKRIV 826
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPN 345
DVA H AL+S G ++ WG + + Q + P + S S+ R PILV +P
Sbjct: 827 DVAVSVAHCLALSSSGEVFGWGRNDSQQ--ICPASVS-------SEPLLRT-PILVSLPT 876
Query: 346 -GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAG 404
+AC + +LV+ + G + + T+ + C + +
Sbjct: 877 FPASGIACTSAQSLVWTQSSH-QGVPRRAPFVVDLGEPTFRLLDQLLGMCSSQDNR-QTP 934
Query: 405 GGHSAVLADACSLKELCEFRLAESVTLSNASEIEDVASRTGSEALARLCERL 456
S +A AC L FRL ++N E V +GS L L R+
Sbjct: 935 NQESECIAVAC----LNLFRLQLLALIANGVEPRQVGLASGSRLLCSLKTRI 982
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 88/230 (38%), Gaps = 60/230 (26%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGS----------------VGQLGHCS-------- 264
+I QV+C E +S+ G++YTW L + GHC
Sbjct: 570 QIKQVACCETQMLILSQEGKLYTWRLAKPEAEPLPMEEVAHEVFISIAGHCEGRHFLAID 629
Query: 265 ---------------LQSGDK--ELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
L GD +P ++ AL+ ++ V CG +S A+T G L W
Sbjct: 630 SNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTW 689
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVA-----CGHSHTLVYMR 362
G +LG G N D R++P LVV +V G +H+L
Sbjct: 690 GRGTYARLGHG----------NSDD---RSLPTLVVALSDHMVVDVALGSGDAHSLALTS 736
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
+G + WG YG+ N + P V+ + V+++ AG S L+
Sbjct: 737 EGLVFAWGDGDYGKLGNGNCNGSLQPILVE-SLPRVQRVFAGSQFSLALS 785
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 34/70 (48%)
Query: 63 RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG 122
R + +A G H AV G ++ WG N+ GQ G G K P V L + FV ++CG
Sbjct: 3281 RVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACG 3340
Query: 123 AHCTAAIAEP 132
+ + A P
Sbjct: 3341 SSHSIAWGLP 3350
>gi|408500851|ref|YP_006864770.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465675|gb|AFU71204.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1070
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/349 (30%), Positives = 155/349 (44%), Gaps = 57/349 (16%)
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQ---LQSEFVK-SISCGAHCTAAIAE 131
AV SDG + WG N +GQLGD T R P V++ + ++F +S G + A+
Sbjct: 574 AVGSDGKAYAWGDNTYGQLGDATTNSRSTPNIVRKPTGVPTDFTYVQVSAGKWHSLALG- 632
Query: 132 PRENDGTISTSRLWVWGQNQ----------GSNFP---RLFWGAFTPNTII--CQVSCGS 176
+DG + + WG NQ S+ P R PN + QVS G
Sbjct: 633 ---SDGYV-----YAWGSNQHGQLGNNTKTNSSVPVRVRDPANPTDPNKGLKAIQVSAGD 684
Query: 177 VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG 236
H +AL G + AWG+N+ G+LG T + P ++ A D + L+ + QVS G
Sbjct: 685 EHSLALDSNGYVYAWGWNDNGRLGNNSTTDS-SVPVRVRDPASPTDPSKGLKAV-QVSAG 742
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV----ALDGIFIKDVACGG 292
+HS AV +G Y WGL + GQLG+ S S + R A G+ V+ G
Sbjct: 743 WHHSLAVGSDGYTYAWGLNNYGQLGNSSKNSSSFPVRVRDFASPNDANKGLKAVQVSAGY 802
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--------VP 344
HS A+ S G YAWG + GQLG S+T +P+ V
Sbjct: 803 SHSLAVGSDGYTYAWGLNNYGQLG-------------NSNTVDSTVPVRVRDPTSPKDAS 849
Query: 345 NGVQLVA--CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
G++ A G H+L +G + WG+N Y Q + ++ + P PV
Sbjct: 850 KGLKATAINAGGEHSLAVGNNGYAYAWGWNLYRQLGDGTTSNSSVPVPV 898
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 120/445 (26%), Positives = 190/445 (42%), Gaps = 60/445 (13%)
Query: 24 YVWGYNHSGQ-----TGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
Y WG N GQ T + +R P +P + ++ ++ G H+ A+
Sbjct: 582 YAWGDNTYGQLGDATTNSRSTPNIVRKPTGVPTDF---------TYVQVSAGKWHSLALG 632
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQL-----QSEFVKSISCGAHCTAAIAEPR 133
SDG ++ WG+N+ GQLG+ T+ P +V+ ++ +K+I A ++A
Sbjct: 633 SDGYVYAWGSNQHGQLGNNTKTNSSVPVRVRDPANPTDPNKGLKAIQVSAGDEHSLA--L 690
Query: 134 ENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVV 180
+++G + W W N S+ P +P QVS G H +
Sbjct: 691 DSNGYV---YAWGWNDNGRLGNNSTTDSSVPVRVRDPASPTDPSKGLKAVQVSAGWHHSL 747
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
A+ G AWG N YGQLG + P ++ +A D L+ + QVS G HS
Sbjct: 748 AVGSDGYTYAWGLNNYGQLGNS-SKNSSSFPVRVRDFASPNDANKGLKAV-QVSAGYSHS 805
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-------ALDGIFIKDVACGGV 293
AV +G Y WGL + GQLG+ + +P RV A G+ + GG
Sbjct: 806 LAVGSDGYTYAWGLNNYGQLGNSNTV---DSTVPVRVRDPTSPKDASKGLKATAINAGGE 862
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--A 351
HS A+ + G YAWG + QLG G + S +P T + G+Q +
Sbjct: 863 HSLAVGNNGYAYAWGWNLYRQLGDGTTSNSSVPVPVRDPTSPAD-----ASKGLQATRFS 917
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEV----RKLAAGGGH 407
G H+L +G + WG NSYGQ + + + P V + + V R + G +
Sbjct: 918 VGDHHSLAVGSNGYAYAWGENSYGQLGDGTTDDSNVPVSVLFNLQPVITAARFDTSPGTN 977
Query: 408 SAVLADACSLKELCEFRLAESVTLS 432
A ++++ S+ L +VT+S
Sbjct: 978 LASVSNSNSVTVLTPAHQPGTVTVS 1002
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 149/372 (40%), Gaps = 51/372 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG N GQ G + +P ++ + + ++ G EH+ A+ S+G
Sbjct: 637 VYAWGSNQHGQLGNNTKTNS-SVPVRVRDPANPTDPNKGLKAIQVSAGDEHSLALDSNGY 695
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKS-------ISCGAHCTAAIAEPREN 135
++ WG N+ G+LG+ + P +V+ S S +S G H + A+
Sbjct: 696 VYAWGWNDNGRLGNNSTTDSSVPVRVRDPASPTDPSKGLKAVQVSAGWHHSLAVG----- 750
Query: 136 DGTISTSRLWVWGQNQ----------GSNFPRLFWGAFTPNTI-----ICQVSCGSVHVV 180
S + WG N S+FP +PN QVS G H +
Sbjct: 751 ----SDGYTYAWGLNNYGQLGNSSKNSSSFPVRVRDFASPNDANKGLKAVQVSAGYSHSL 806
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
A+ G AWG N YGQLG T + RV + +A + K T ++ G HS
Sbjct: 807 AVGSDGYTYAWGLNNYGQLGNSNTVDSTVPVRVRDPTSP--KDASKGLKATAINAGGEHS 864
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV----ALDGIFIKDVACGGVHSC 296
AV NG Y WG QLG + + + R A G+ + G HS
Sbjct: 865 LAVGNNGYAYAWGWNLYRQLGDGTTSNSSVPVPVRDPTSPADASKGLQATRFSVGDHHSL 924
Query: 297 ALTSKGALYAWGGSQAGQLGLG-------PQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
A+ S G YAWG + GQLG G P + F+L P + F P G L
Sbjct: 925 AVGSNGYAYAWGENSYGQLGDGTTDDSNVPVSVLFNLQPVITAARFDTSP------GTNL 978
Query: 350 VACGHSHTLVYM 361
+ +S+++ +
Sbjct: 979 ASVSNSNSVTVL 990
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 107/247 (43%), Gaps = 26/247 (10%)
Query: 177 VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG 236
V +A+ G AWG N YGQLG T R + P QVS G
Sbjct: 570 VFSLAVGSDGKAYAWGDNTYGQLGDATTNS-----RSTPNIVRKPTGVPTDFTYVQVSAG 624
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-------ALDGIFIKDVA 289
++HS A+ +G VY WG GQLG+ + + +P RV G+ V+
Sbjct: 625 KWHSLALGSDGYVYAWGSNQHGQLGNNTKTNSS---VPVRVRDPANPTDPNKGLKAIQVS 681
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
G HS AL S G +YAWG + G+LG T S S+ D P + VQ
Sbjct: 682 AGDEHSLALDSNGYVYAWGWNDNGRLGNNSTTDS-SVPVRVRDPASPTDPSKGL-KAVQ- 738
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYP-------SPVDWCVG-EVRKL 401
V+ G H+L DG + WG N+YGQ N + +P SP D G + ++
Sbjct: 739 VSAGWHHSLAVGSDGYTYAWGLNNYGQLGNSSKNSSSFPVRVRDFASPNDANKGLKAVQV 798
Query: 402 AAGGGHS 408
+AG HS
Sbjct: 799 SAGYSHS 805
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 96/197 (48%), Gaps = 24/197 (12%)
Query: 229 KITQVSCGEYH----SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV--VALDG 282
+ QV +Y+ S AV +G+ Y WG + GQLG + S + R+ V D
Sbjct: 557 RFNQVGGAKYYTYVFSLAVGSDGKAYAWGDNTYGQLGDATTNSRSTPNIVRKPTGVPTDF 616
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
+++ V+ G HS AL S G +YAWG +Q GQLG T++ S +P R+
Sbjct: 617 TYVQ-VSAGKWHSLALGSDGYVYAWGSNQHGQLGN--NTKTNSSVP----VRVRDPANPT 669
Query: 343 VPN-GVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYP-------SPVD 392
PN G++ V+ G H+L +G ++ WG+N G+ N +T + P SP D
Sbjct: 670 DPNKGLKAIQVSAGDEHSLALDSNGYVYAWGWNDNGRLGNNSTTDSSVPVRVRDPASPTD 729
Query: 393 WCVG-EVRKLAAGGGHS 408
G + +++AG HS
Sbjct: 730 PSKGLKAVQVSAGWHHS 746
>gi|195345959|ref|XP_002039536.1| GM23027 [Drosophila sechellia]
gi|194134762|gb|EDW56278.1| GM23027 [Drosophila sechellia]
Length = 3806
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 163/352 (46%), Gaps = 55/352 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G +G+ G G + +P QLP + + + G +H A+ DG
Sbjct: 2695 VYACGEGTNGRLGL-GVTHNVPLPHQLP-----VLHQYVVKKVAVHSGGKHALALTLDGK 2748
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F+WG E G+LG G P V+ L+++ ++ ++CG+ +AAI+ S
Sbjct: 2749 VFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAIS---------SQG 2799
Query: 143 RLWVWGQNQ------GSNFPRLFWGAFT--PNTIICQVSCGS--VHVVALSECGLLQAWG 192
L+ WG + G N +L T + QV+CGS +AL+E G + +WG
Sbjct: 2800 ELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWG 2859
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
++G+LGRG EG P I+ + + Q+ CG S A++ GEV+TW
Sbjct: 2860 DGDFGKLGRG-GSEGSDTPHEIERLSGI--------GVVQIECGAQFSLALTRAGEVWTW 2910
Query: 253 GLGSVGQLGHCSLQSGDKELL-PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
G G +LGH GD+ + P+ + L G + VA G +H A+T G +YAWG +
Sbjct: 2911 GKGDYYRLGH----GGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDND 2966
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVY 360
GQ G G +T+ P LV+ V VACG SH++ +
Sbjct: 2967 HGQQGSG-------------NTFVNKKPALVIGLDAVFVNRVACGSSHSIAW 3005
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 163/410 (39%), Gaps = 92/410 (22%)
Query: 11 ARPVDNIPAKSAIYVWGYNHSGQTG-RKGRERQLRIPKQLPPELFGCPAGANSRWLDIAC 69
A P ++P + VWG N Q G KG + ++ Q L R + IA
Sbjct: 2633 AAPEQDLPC--TVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRL---------RPIHIAG 2681
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAI 129
G + V+ DG ++ G G+LG G P ++ L VK ++
Sbjct: 2682 GSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVA--------- 2732
Query: 130 AEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQ 189
V G H +AL+ G +
Sbjct: 2733 ------------------------------------------VHSGGKHALALTLDGKVF 2750
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
+WG E G+LG G L PR++ EA +KI V+CG HSAA+S GE+
Sbjct: 2751 SWGEGEDGKLGHG-NRTTLDKPRLV--------EALRAKKIRDVACGSSHSAAISSQGEL 2801
Query: 250 YTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALY 305
YTWGLG G+LGH GD +L P+ V AL G + VACG + ALT GA++
Sbjct: 2802 YTWGLGEYGRLGH-----GDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVF 2856
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
+WG G+LG G S + P+E + I GV + CG +L R G
Sbjct: 2857 SWGDGDFGKLGRGGSEGSDT--PHEIE-RLSGI-------GVVQIECGAQFSLALTRAGE 2906
Query: 366 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADA 414
+ WG Y + + + P P+ G V +A G H + DA
Sbjct: 2907 VWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDA 2956
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 171/412 (41%), Gaps = 53/412 (12%)
Query: 60 ANSRWLDIA--CGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVK 117
A+ ++ IA C H A+ S+ ++WG E +LG G R P K+ L+ V+
Sbjct: 266 AHDVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQ 325
Query: 118 SISCGAHCTAAIAEPRENDGTISTSRLWVWGQ----------NQGSNFPRLFWGAFTPNT 167
S+ CG +AAI L WG+ + + P L
Sbjct: 326 SVYCGCSYSAAIT---------CGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMV 376
Query: 168 IICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL 227
+ + G H +AL+ GL+ AWG +YG+LG G C G P +++ L
Sbjct: 377 VDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNG-NCNGSLQPILVES----------L 425
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKEL-LPRRVVALDGIFIK 286
++ +V G S A+S G++YTWG + LGH ++ + +PR V +L I
Sbjct: 426 PRVQRVFAGSQFSVALSSEGQLYTWGKATC--LGHQLVERSVQGCSVPRLVSSLQHKRIV 483
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPN 345
DVA H AL+S G ++ WG + + Q + P + S S+ R PILV +P
Sbjct: 484 DVAVSVAHCLALSSSGEVFGWGRNDSQQ--ICPASVS-------SEPLLRT-PILVSLPT 533
Query: 346 -GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAG 404
+AC + +LV+ + G + + T+ + C + +
Sbjct: 534 FPASGIACTSAQSLVWTQSSH-QGVPRRAPFVVDLGEPTFRLLDQLLGMCSSQDNR-QTP 591
Query: 405 GGHSAVLADACSLKELCEFRLAESVTLSNASEIEDVASRTGSEALARLCERL 456
S +A AC L FRL ++N E V +GS L L R+
Sbjct: 592 NQESECIAVAC----LNLFRLQLLALIANGVEPRQVGLASGSRLLCSLKTRI 639
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 80/191 (41%), Gaps = 34/191 (17%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
+I QV+C E +S+ G++YTW L + E LP VA D +FI
Sbjct: 227 QIKQVACCETQMLILSQEGKLYTWRLAK-----------PEAEPLPMEEVAHD-VFISIA 274
Query: 289 A-CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP--- 344
C G H A+ S Y+WG + +LG G DT+ R +P +
Sbjct: 275 GHCEGRHFLAIDSNHNAYSWGTGEDHRLGHG-------------DTHARAVPTKIAALEQ 321
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV----DWCVGEVRK 400
+ VQ V CG S++ G + WG +Y + + S P+ V D V +V
Sbjct: 322 HCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDV-A 380
Query: 401 LAAGGGHSAVL 411
L +G HS L
Sbjct: 381 LGSGDAHSLAL 391
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 34/70 (48%)
Query: 63 RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG 122
R + +A G H AV G ++ WG N+ GQ G G K P V L + FV ++CG
Sbjct: 2939 RVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACG 2998
Query: 123 AHCTAAIAEP 132
+ + A P
Sbjct: 2999 SSHSIAWGLP 3008
Score = 42.0 bits (97), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 50/108 (46%), Gaps = 11/108 (10%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S IY WG+NH GQ G G E RI P C A + R + +A G + AV D
Sbjct: 3702 STIYGWGHNHRGQLG--GLEGS-RIKTPTP-----CEALSLLRPVQLAGGEQSLFAVTPD 3753
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHC 125
G LF G G+LG G + P + LQ FVK ++ G HC
Sbjct: 3754 GKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHC 3801
>gi|325181521|emb|CCA15971.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 6906
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 101/343 (29%), Positives = 153/343 (44%), Gaps = 36/343 (10%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F+ G N +G+L G E+ + ++SI+ G + + DG + T
Sbjct: 3135 IFSCGQNNYGELCLGHCNPTNKLERASFFSYKSIQSIAGGNEVLVVLMK----DGAVFTC 3190
Query: 143 RLWVWGQNQGSNF-PRLFWGAFTPN-----TIICQVSCGSVHVVALSECGLLQAWGYNEY 196
L GQ NF RL + P + S G H++A+S G + +WGYN+
Sbjct: 3191 GLNKSGQCGIGNFDERLIVPSPIPALSGIPITMVAASNGCEHMLAISHDGAVYSWGYNDR 3250
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG G T PRVI+ E IT + +HSA VS NG++ T+G+
Sbjct: 3251 GQLGLGTTVSKSHTPRVIESLR-------EKYFITFAAVSYHHSAVVSNNGDLLTFGMND 3303
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
GQLG L + P+ V L + VACG H+ A+ G +Y++G ++ GQLG
Sbjct: 3304 SGQLG---LDHTQHQHTPQLVETLSSQKVGRVACGLYHTVAIVDDGDVYSFGKNEYGQLG 3360
Query: 317 L----GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYN 372
L + IP T P+L N V CG+ HT+ + G++ WG N
Sbjct: 3361 LSHTQNTKVPMLVKIPPAPRT-----PMLDAVNKAVQVYCGYYHTVTILECGKVVTWGRN 3415
Query: 373 SYGQ----AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
YGQ + KS + P P+ V++ + G H+ +L
Sbjct: 3416 DYGQLGIGSKEHKSIAQFVPLPL---TSRVKRASCGCYHTLLL 3455
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 152/312 (48%), Gaps = 31/312 (9%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A++ G N SGQ G + +L +P +P L G P + + G EH A++ DG
Sbjct: 3186 AVFTCGLNKSGQCGIGNFDERLIVPSPIPA-LSGIPIT----MVAASNGCEHMLAISHDG 3240
Query: 82 TLFTWGANEFGQLGDGTEEGRKH-PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+++WG N+ GQLG GT + H P ++ L+ ++ + + ++ +A+ N+G +
Sbjct: 3241 AVYSWGYNDRGQLGLGTTVSKSHTPRVIESLREKYFITFAAVSYHHSAVV---SNNGDLL 3297
Query: 141 TSRLWVWGQ-----NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNE 195
T + GQ Q + P+L + + +V+CG H VA+ + G + ++G NE
Sbjct: 3298 TFGMNDSGQLGLDHTQHQHTPQLVETLSSQK--VGRVACGLYHTVAIVDDGDVYSFGKNE 3355
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPE------LEKITQVSCGEYHSAAVSENGEV 249
YGQLG T + + P ++K + AP + K QV CG YH+ + E G+V
Sbjct: 3356 YGQLGLSHT-QNTKVPMLVK-----IPPAPRTPMLDAVNKAVQVYCGYYHTVTILECGKV 3409
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
TWG GQLG + S + + + + V +K +CG H+ L G +G
Sbjct: 3410 VTWGRNDYGQLG---IGSKEHKSIAQFVPLPLTSRVKRASCGCYHTLLLLVNGRPMVFGR 3466
Query: 310 SQAGQLGLGPQT 321
+ GQLG+ ++
Sbjct: 3467 NNKGQLGVASRS 3478
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 137/305 (44%), Gaps = 34/305 (11%)
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
S G L++ G N +G+LG G + R V + ++ + G A + +DG
Sbjct: 346 SFGELYSCGQNSYGELGLGDDIERHQLTSVPLCGWDHIRQVVSGNEILAILT----SDGV 401
Query: 139 ISTSRLWVWGQNQGSNFP------RLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
+ T L GQ NF R + S G H++A+++ GL +WG
Sbjct: 402 VLTCGLNKSGQCGHGNFDERVMLLRPIQALRSHRVKYINASNGCEHLIAITDTGLAYSWG 461
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
YN+ GQLG L P++I E+ + +K+ + +HSA VS +GE+YT+
Sbjct: 462 YNDRGQLGHENVGTKLYLPKLI--------ESIKEKKMKSAAVSYHHSALVSVSGELYTF 513
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G+ GQLG L + P+ V AL G + V+CG H T G ++ G +
Sbjct: 514 GMNDCGQLG---LDHTQHQSTPQLVKALLGHHVSMVSCGLYHMVLCTISGEVFTCGKNDH 570
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG-VQLVACGHSHTLVYMRDGRIHGWGY 371
GQLGLG + +P + +V+PN V VACG+ H G + +G
Sbjct: 571 GQLGLGHNKQ--VKVPTQ----------VVLPNELVCFVACGYYHATAITSTGLTYSFGR 618
Query: 372 NSYGQ 376
N YGQ
Sbjct: 619 NDYGQ 623
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 152/338 (44%), Gaps = 46/338 (13%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEK-VKQLQSEFVKSISCGAHC 125
+ G+E A + SDG + T G N+ GQ G G + R + ++ L+S VK I+ C
Sbjct: 386 VVSGNEILAILTSDGVVLTCGLNKSGQCGHGNFDERVMLLRPIQALRSHRVKYINASNGC 445
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNF------PRLFWGAFTPNTIICQVSCGSV-- 177
IA T + WG N +L+ + ++ +V
Sbjct: 446 EHLIA-------ITDTGLAYSWGYNDRGQLGHENVGTKLYLPKLIESIKEKKMKSAAVSY 498
Query: 178 -HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG 236
H +S G L +G N+ GQLG T + P+++K ++ VSCG
Sbjct: 499 HHSALVSVSGELYTFGMNDCGQLGLDHT-QHQSTPQLVKALLG--------HHVSMVSCG 549
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSC 296
YH + +GEV+T G GQLG L + +P +VV L + VACG H+
Sbjct: 550 LYHMVLCTISGEVFTCGKNDHGQLG---LGHNKQVKVPTQVV-LPNELVCFVACGYYHAT 605
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI-LVVPNGVQLV--ACG 353
A+TS G Y++G + GQLG+G + +NIPI L + + ++V ACG
Sbjct: 606 AITSTGLTYSFGRNDYGQLGIGSKIH-------------QNIPIALTISSNTRMVHAACG 652
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
HTL+ G++ +G N+ GQ N +T + P P+
Sbjct: 653 CYHTLLMSDSGQVFVFGRNNKGQLGNRGNTDSLLPVPL 690
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 122/265 (46%), Gaps = 39/265 (14%)
Query: 22 AIYVWGYNHSGQTG---RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A+Y WGYN GQ G + R+ + L + F A A + H+A V+
Sbjct: 3241 AVYSWGYNDRGQLGLGTTVSKSHTPRVIESLREKYFITFA---------AVSYHHSAVVS 3291
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
++G L T+G N+ GQLG + + P+ V+ L S+ V ++CG + T AI + DG
Sbjct: 3292 NNGDLLTFGMNDSGQLGLDHTQHQHTPQLVETLSSQKVGRVACGLYHTVAIVD----DGD 3347
Query: 139 ISTSRLWVWGQ-----NQGSNFPRLFWGAFTPNTII-------CQVSCGSVHVVALSECG 186
+ + +GQ Q + P L P T + QV CG H V + ECG
Sbjct: 3348 VYSFGKNEYGQLGLSHTQNTKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTILECG 3407
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ WG N+YGQLG G + K A+F+ P ++ + SCG YH+ + N
Sbjct: 3408 KVVTWGRNDYGQLG--------IGSKEHKSIAQFV-PLPLTSRVKRASCGCYHTLLLLVN 3458
Query: 247 GEVYTWGLGSVGQLGHC--SLQSGD 269
G +G + GQLG SL S D
Sbjct: 3459 GRPMVFGRNNKGQLGVASRSLPSAD 3483
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 117/246 (47%), Gaps = 32/246 (13%)
Query: 24 YVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTL 83
Y WGYN GQ G + +L +PK + + + A + H+A V+ G L
Sbjct: 458 YSWGYNDRGQLGHENVGTKLYLPKLIE-------SIKEKKMKSAAVSYHHSALVSVSGEL 510
Query: 84 FTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH----CTAA--IAEPREND- 136
+T+G N+ GQLG + + P+ VK L V +SCG + CT + + +ND
Sbjct: 511 YTFGMNDCGQLGLDHTQHQSTPQLVKALLGHHVSMVSCGLYHMVLCTISGEVFTCGKNDH 570
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
G + G N+ P PN ++C V+CG H A++ GL ++G N+Y
Sbjct: 571 GQLG------LGHNKQVKVPT---QVVLPNELVCFVACGYYHATAITSTGLTYSFGRNDY 621
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG G ++ + L + ++ +CG YH+ +S++G+V+ +G +
Sbjct: 622 GQLG--------IGSKIHQNIPIALTISSN-TRMVHAACGCYHTLLMSDSGQVFVFGRNN 672
Query: 257 VGQLGH 262
GQLG+
Sbjct: 673 KGQLGN 678
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 138/318 (43%), Gaps = 40/318 (12%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+ G N SGQ G + ++ + + + ++++ + G EH A+ G
Sbjct: 401 VVLTCGLNKSGQCGHGNFDERVMLLRPI-----QALRSHRVKYINASNGCEHLIAITDTG 455
Query: 82 TLFTWGANEFGQLGDGTEEGRKH-PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
++WG N+ GQLG + + P+ ++ ++ + +KS + H +A ++ E
Sbjct: 456 LAYSWGYNDRGQLGHENVGTKLYLPKLIESIKEKKMKSAAVSYHHSALVSVSGE------ 509
Query: 141 TSRLWVWGQN----------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
L+ +G N Q + P+L + + VSCG H+V + G +
Sbjct: 510 ---LYTFGMNDCGQLGLDHTQHQSTPQLVKALLGHH--VSMVSCGLYHMVLCTISGEVFT 564
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
G N++GQLG G + +V+ P E + V+CG YH+ A++ G Y
Sbjct: 565 CGKNDHGQLGLGHNKQVKVPTQVV---------LPN-ELVCFVACGYYHATAITSTGLTY 614
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
++G GQLG + S + +P + + ACG H+ ++ G ++ +G +
Sbjct: 615 SFGRNDYGQLG---IGSKIHQNIPIALTISSNTRMVHAACGCYHTLLMSDSGQVFVFGRN 671
Query: 311 QAGQLGLGPQTRSFSLIP 328
GQLG T S +P
Sbjct: 672 NKGQLGNRGNTDSLLPVP 689
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 98/232 (42%), Gaps = 30/232 (12%)
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRV-IKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G L + G N YG+LG G E Q V + G+ + I QV G A ++
Sbjct: 348 GELYSCGQNSYGELGLGDDIERHQLTSVPLCGW----------DHIRQVVSGNEILAILT 397
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK--DVACGGVHSCALTSKG 302
+G V T GL GQ GH + ++ +L R + AL +K + + G H A+T G
Sbjct: 398 SDGVVLTCGLNKSGQCGHGNFD--ERVMLLRPIQALRSHRVKYINASNGCEHLIAITDTG 455
Query: 303 ALYAWGGSQAGQLG---LGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
Y+WG + GQLG +G + LI + + ++ A + H+ +
Sbjct: 456 LAYSWGYNDRGQLGHENVGTKLYLPKLIESIKEKKMKS------------AAVSYHHSAL 503
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
G ++ +G N GQ + + + P V +G + + G + VL
Sbjct: 504 VSVSGELYTFGMNDCGQLGLDHTQHQSTPQLVKALLGHHVSMVSCGLYHMVL 555
>gi|159039902|ref|YP_001539155.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157918737|gb|ABW00165.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 546
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 149/357 (41%), Gaps = 64/357 (17%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A + WG N GQ G L P PAG + +A G +H+ A+
Sbjct: 104 AAGTVLAWGDNSHGQLGDGTGADSLT------PVGVSLPAGVTAS--AVAAGRDHSVALT 155
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
S GT+ WG N FGQLGDGT R P V S V +++ GA + A+
Sbjct: 156 SAGTVLAWGGNSFGQLGDGTVVDRSTPVAVALPPSTTVTAVAAGATHSVAL--------- 206
Query: 139 ISTSRLWVWGQNQGSNFPRLFWG-----------AFTPNTIICQVSCGSVHVVALSECGL 187
S + WG N F +L G A P+T + V+ G H VAL+ G
Sbjct: 207 TSAGTVLAWGGNP---FGQLGDGTVVDRSTPVAVALPPSTTVTAVAAGGNHSVALTSAGT 263
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWG N +GQLG G + P V+ P + V+ G HS A++ G
Sbjct: 264 VLAWGRNFFGQLGDGTVVD-RSTPTVV--------SLPAGVTASAVAAGRIHSLALTTAG 314
Query: 248 EVYTWGLGSVGQLGH---CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
V WG + GQLG + + LP + I +D HS A+TS GA
Sbjct: 315 GVLAWGNNTFGQLGDGTTTTSSTPVSVTLPAATT-ITAISARD----SQHSVAMTSAGAA 369
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQL--VACGHSHTL 358
+WG + GQLG + T R+ P+ V +P GV + +A G H+L
Sbjct: 370 LSWGRNLRGQLG-------------DGTTTTRSTPVDVHLPTGVTVTAIAAGDDHSL 413
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 116/403 (28%), Positives = 161/403 (39%), Gaps = 56/403 (13%)
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
H+ A+ + GT+ WG N GQLGDGT P V S+ G +A A
Sbjct: 98 HSVALTAAGTVLAWGDNSHGQLGDGTGADSLTPVGV---------SLPAGVTASAVAAGR 148
Query: 133 RENDGTISTSRLWVWGQNQGSNFPRLFWG-----------AFTPNTIICQVSCGSVHVVA 181
+ S + WG G++F +L G A P+T + V+ G+ H VA
Sbjct: 149 DHSVALTSAGTVLAWG---GNSFGQLGDGTVVDRSTPVAVALPPSTTVTAVAAGATHSVA 205
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
L+ G + AWG N +GQLG G V+ P +T V+ G HS
Sbjct: 206 LTSAGTVLAWGGNPFGQLGDG---------TVVDRSTPVAVALPPSTTVTAVAAGGNHSV 256
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A++ G V WG GQLG ++ D+ P V G+ VA G +HS ALT+
Sbjct: 257 ALTSAGTVLAWGRNFFGQLGDGTVV--DRS-TPTVVSLPAGVTASAVAAGRIHSLALTTA 313
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
G + AWG + GQLG G T S +P + A H++
Sbjct: 314 GGVLAWGNNTFGQLGDGTTTT-------SSTPVSVTLPAATTITAIS--ARDSQHSVAMT 364
Query: 362 RDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLADACSLKE 419
G WG N GQ + +T P V G V +AAG HS A+ A S
Sbjct: 365 SAGAALSWGRNLRGQLGDGTTTTRSTPVDVHLPTGVTVTAIAAGDDHSLALTAPPTSTTT 424
Query: 420 L----------CEFRLAESVTLSNASEIEDVASRTGSEALARL 452
L + L +VT + + + RT E LA +
Sbjct: 425 LQVTPANPTADQDVTLTATVTCNVDTPTGTITFRTNGETLATV 467
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 130/311 (41%), Gaps = 47/311 (15%)
Query: 78 ASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAHCTAAIAEPREND 136
A+ T+ WG+N FG+LG+GT P V + V + AH A A
Sbjct: 51 AASDTILAWGSNFFGELGNGTTTNSSTPVDVSLPADTAAVAIAAGDAHSVALTAA----- 105
Query: 137 GTISTSRLWVWGQNQ------GSNFPRLF-WGAFTPNTIICQ-VSCGSVHVVALSECGLL 188
GT+ WG N G+ L G P + V+ G H VAL+ G +
Sbjct: 106 GTV-----LAWGDNSHGQLGDGTGADSLTPVGVSLPAGVTASAVAAGRDHSVALTSAGTV 160
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
AWG N +GQLG G V+ P +T V+ G HS A++ G
Sbjct: 161 LAWGGNSFGQLGDG---------TVVDRSTPVAVALPPSTTVTAVAAGATHSVALTSAGT 211
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
V WG GQLG ++ D+ P V + VA GG HS ALTS G + AWG
Sbjct: 212 VLAWGGNPFGQLGDGTVV--DRS-TPVAVALPPSTTVTAVAAGGNHSVALTSAGTVLAWG 268
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGV--QLVACGHSHTLVYMRDGR 365
+ GQLG + R+ P +V +P GV VA G H+L G
Sbjct: 269 RNFFGQLG-------------DGTVVDRSTPTVVSLPAGVTASAVAAGRIHSLALTTAGG 315
Query: 366 IHGWGYNSYGQ 376
+ WG N++GQ
Sbjct: 316 VLAWGNNTFGQ 326
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 118/297 (39%), Gaps = 56/297 (18%)
Query: 23 IYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+ WG N GQ G +R + LPP + +A G H+ A+ S G
Sbjct: 160 VLAWGGNSFGQLGDGTVVDRSTPVAVALPPS---------TTVTAVAAGATHSVALTSAG 210
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
T+ WG N FGQLGDGT R P V S V +++ G + + A+ S
Sbjct: 211 TVLAWGGNPFGQLGDGTVVDRSTPVAVALPPSTTVTAVAAGGNHSVAL---------TSA 261
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPNTII----------------CQVSCGSVHVVALSEC 185
+ WG+N F+G T++ V+ G +H +AL+
Sbjct: 262 GTVLAWGRN--------FFGQLGDGTVVDRSTPTVVSLPAGVTASAVAAGRIHSLALTTA 313
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY-HSAAVS 244
G + AWG N +GQLG G T P IT +S + HS A++
Sbjct: 314 GGVLAWGNNTFGQLGDGTTT---------TSSTPVSVTLPAATTITAISARDSQHSVAMT 364
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
G +WG GQLG + + P V G+ + +A G HS ALT+
Sbjct: 365 SAGAALSWGRNLRGQLGDGTTTT---RSTPVDVHLPTGVTVTAIAAGDDHSLALTAP 418
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 99/237 (41%), Gaps = 35/237 (14%)
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWG N +G+LG G T V P ++ G+ HS A++ G
Sbjct: 56 ILAWGSNFFGELGNGTTTNSSTPVDV---------SLPADTAAVAIAAGDAHSVALTAAG 106
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
V WG S GQLG +G L P V G+ VA G HS ALTS G + AW
Sbjct: 107 TVLAWGDNSHGQLGD---GTGADSLTPVGVSLPAGVTASAVAAGRDHSVALTSAGTVLAW 163
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDG 364
GG+ GQLG + R+ P+ V V VA G +H++ G
Sbjct: 164 GGNSFGQLG-------------DGTVVDRSTPVAVALPPSTTVTAVAAGATHSVALTSAG 210
Query: 365 RIHGWGYNSYGQAAN----EKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSL 417
+ WG N +GQ + ++ST P V V AAGG HS L A ++
Sbjct: 211 TVLAWGGNPFGQLGDGTVVDRSTPVAVALPPSTTVTAV---AAGGNHSVALTSAGTV 264
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%)
Query: 72 EHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
+H+ A+ S G +WG N GQLGDGT R P V V +I+ G + A+
Sbjct: 358 QHSVAMTSAGAALSWGRNLRGQLGDGTTTTRSTPVDVHLPTGVTVTAIAAGDDHSLALTA 417
Query: 132 PRENDGTI 139
P + T+
Sbjct: 418 PPTSTTTL 425
>gi|8131934|gb|AAF73143.1|AF148800_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
familiaris]
Length = 918
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 109/351 (31%), Positives = 171/351 (48%), Gaps = 30/351 (8%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++CG EHTA V + L+ +G+N +GQLG G++ P VK L+ E VK +CG + T
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99
Query: 127 AAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
E + G + +L + + S F + + FT I Q+S GS AL+E
Sbjct: 100 LVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISF--FTSQRKIKQLSAGSNTSAALTE 157
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G L WG N GQ+G +V G + I+ +SCG YHSA V+
Sbjct: 158 DGELFMWGDNSEGQIGLENVTNVCVPQQVTVG-----------KPISWISCGYYHSAFVT 206
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
G++YT+G G+LG + Q +P+ V + G ++ VACGG H+ LT K A+
Sbjct: 207 TEGQLYTFGEPECGKLGLPN-QLLVNHRMPQPVPGIPGKVVQ-VACGGGHTVVLTEK-AV 263
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 364
Y +G Q GQLGLG T F ++ + ++ + +ACG +HT + G
Sbjct: 264 YTFGLGQFGQLGLG--TFLFETSVPKAIEHIKD-------QKISFIACGENHTALITDMG 314
Query: 365 RIHGWGYNSYGQ--AANEKSTYAWYPSP-VDWCVGEVRKLAAGGGHSAVLA 412
++ +G +G+ E ST + P+ ++ V+ ++ GG H+ V A
Sbjct: 315 LMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHTLVFA 365
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 124/286 (43%), Gaps = 51/286 (17%)
Query: 144 LWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
++ +G+ Q N P FW N + +SCG H ++ L +G N +GQLG G
Sbjct: 14 VFTFGKTQFAENIPSKFWFR---NDVPTFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLG 70
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
+ + P +K A + EK+ +CG H+ +E G+VY G + GQLG
Sbjct: 71 -SKSTVSKPTCVK--------ALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLG- 120
Query: 263 CSLQSGDKELLPRRVVALDGIF-----IKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GD E R L F IK ++ G S ALT G L+ WG + GQ+GL
Sbjct: 121 ----LGDTE--ERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGL 174
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQL------VACGHSHTLVYMRDGRIHGWGY 371
N+ + VP V + ++CG+ H+ +G+++ +G
Sbjct: 175 ------------------ENVTNVCVPQQVTVGKPISWISCGYYHSAFVTTEGQLYTFGE 216
Query: 372 NSYGQAA--NEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADAC 415
G+ N+ P PV G+V ++A GGGH+ VL +
Sbjct: 217 PECGKLGLPNQLLVNHRMPQPVPGIPGKVVQVACGGGHTVVLTEKA 262
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 103/233 (44%), Gaps = 47/233 (20%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+++WG N GQ G + + +P+Q+ G W I+CG+ H+A V ++G
Sbjct: 161 LFMWGDNSEGQIGLENV-TNVCVPQQV-------TVGKPISW--ISCGYYHSAFVTTEGQ 210
Query: 83 LFTWGANEFGQLGDGTEEGRKH--PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
L+T+G E G+LG + H P+ V + + V+ ++CG T + E
Sbjct: 211 LYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKVVQ-VACGGGHTVVLTE--------- 260
Query: 141 TSRLWVWGQNQGSNFPRLFWGAF-----TPNTI-------ICQVSCGSVHVVALSECGLL 188
++ +G Q F +L G F P I I ++CG H +++ GL+
Sbjct: 261 -KAVYTFGLGQ---FGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLM 316
Query: 189 QAWGYNEYGQLGRGITCEGLQG-PRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
+G +G+LG G+ Q P + + +F+ + VSCG H+
Sbjct: 317 YTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFI--------VQLVSCGGCHT 361
>gi|355694504|gb|AER99691.1| hect domain and RLD 6 [Mustela putorius furo]
Length = 1014
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/240 (36%), Positives = 120/240 (50%), Gaps = 22/240 (9%)
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
VSCG H +A+ G + AWG GQLG G E PR IK KI
Sbjct: 80 VSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFNEINLIPRKIKTLTDI--------KII 131
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKDV 288
QVSCG +HS A+SE+G ++TWG S GQLG C Q+ P+RV LDGI + V
Sbjct: 132 QVSCGHHHSLALSEDGRLFTWGSNSHGQLGLGKECPSQAS-----PQRVQFLDGIPLTQV 186
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
A GG HS AL+ GA + WG + GQL L + ++ ++ + + L GV
Sbjct: 187 AAGGAHSFALSLSGASFGWGSNSEGQLAL--RKKNVPVVQSSKPCSVDALENL----GVV 240
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
++CG+ HT V + G++ +G NSYGQ + P V+ G V ++ G H+
Sbjct: 241 YISCGYEHTAVLTQTGKVFTFGGNSYGQLGYSPTAGKEGPQLVEGIDGLVSQIDCGSYHT 300
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 152/321 (47%), Gaps = 53/321 (16%)
Query: 68 ACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTA 127
A G H+ + S+G L ++G N GQLG + ++ P+++ L++ V +SCG +
Sbjct: 29 ASGERHSLLLLSNGELHSYGDNSHGQLGRRDVQRQEQPKRIPALETLRVDLVSCGKEHSL 88
Query: 128 AIAEPRENDGTISTSRLWVWGQ-----------NQGSNFPRLFWGAFTPNTIICQVSCGS 176
A+ R++ WG N+ + PR T II QVSCG
Sbjct: 89 AVC---------YKGRVFAWGAGSEGQLGIGEFNEINLIPRKI-KTLTDIKII-QVSCGH 137
Query: 177 VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG 236
H +ALSE G L WG N +GQLG G C P+ + +FLD P +TQV+ G
Sbjct: 138 HHSLALSEDGRLFTWGSNSHGQLGLGKECPSQASPQRV----QFLDGIP----LTQVAAG 189
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL----PRRVVALDGIFIKDVACGG 292
HS A+S +G + WG S GQL +L+ + ++ P V AL+ + + ++CG
Sbjct: 190 GAHSFALSLSGASFGWGSNSEGQL---ALRKKNVPVVQSSKPCSVDALENLGVVYISCGY 246
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLV 350
H+ LT G ++ +GG+ GQLG P T + P LV + V +
Sbjct: 247 EHTAVLTQTGKVFTFGGNSYGQLGYSP-------------TAGKEGPQLVEGIDGLVSQI 293
Query: 351 ACGHSHTLVYM-RDGRIHGWG 370
CG HTL Y+ G++ +G
Sbjct: 294 DCGSYHTLAYVYTTGKVVSFG 314
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 111/249 (44%), Gaps = 25/249 (10%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
Q + G H + L G L ++G N +GQLGR Q R+ A E ++
Sbjct: 27 QAASGERHSLLLLSNGELHSYGDNSHGQLGRRDVQRQEQPKRI---------PALETLRV 77
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
VSCG+ HS AV G V+ WG GS GQLG + L+PR++ L I I V+C
Sbjct: 78 DLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEF--NEINLIPRKIKTLTDIKIIQVSC 135
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
G HS AL+ G L+ WG + GQLGLG + S + + + IP+ V
Sbjct: 136 GHHHSLALSEDGRLFTWGSNSHGQLGLGKECPSQA--SPQRVQFLDGIPL-------TQV 186
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL-----AAGG 405
A G +H+ G GWG NS GQ A K S V + L + G
Sbjct: 187 AAGGAHSFALSLSGASFGWGSNSEGQLALRKKNVPVVQSSKPCSVDALENLGVVYISCGY 246
Query: 406 GHSAVLADA 414
H+AVL
Sbjct: 247 EHTAVLTQT 255
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/314 (30%), Positives = 141/314 (44%), Gaps = 49/314 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ +G N GQ GR+ +RQ + PK++ PA R ++CG EH+ AV G
Sbjct: 44 LHSYGDNSHGQLGRRDVQRQEQ-PKRI-------PALETLRVDLVSCGKEHSLAVCYKGR 95
Query: 83 LFTWGANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WGA GQLG G E P K+K L + +SCG H + A++E DG
Sbjct: 96 VFAWGAGSEGQLGIGEFNEINLIPRKIKTLTDIKIIQVSCGHHHSLALSE----DG---- 147
Query: 142 SRLWVWGQNQ------GSNFP------RLFWGAFTPNTIICQVSCGSVHVVALSECGLLQ 189
RL+ WG N G P R+ F + QV+ G H ALS G
Sbjct: 148 -RLFTWGSNSHGQLGLGKECPSQASPQRV---QFLDGIPLTQVAAGGAHSFALSLSGASF 203
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
WG N GQL + V++ +A E + +SCG H+A +++ G+V
Sbjct: 204 GWGSNSEGQLAL-----RKKNVPVVQSSKPCSVDALENLGVVYISCGYEHTAVLTQTGKV 258
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
+T+G S GQLG+ + P+ V +DG+ + + CG H+ A Y +
Sbjct: 259 FTFGGNSYGQLGYSPTAGKEG---PQLVEGIDGL-VSQIDCGSYHTLA-------YVYTT 307
Query: 310 SQAGQLGLGPQTRS 323
+ G GP +S
Sbjct: 308 GKVVSFGRGPCCKS 321
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 116/252 (46%), Gaps = 44/252 (17%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG GQ G IP+++ + + + ++CGH H+ A++
Sbjct: 93 KGRVFAWGAGSEGQLGIGEFNEINLIPRKIK-------TLTDIKIIQVSCGHHHSLALSE 145
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG LFTWG+N GQLG G E + P++V+ L + ++ G + A++ + G
Sbjct: 146 DGRLFTWGSNSHGQLGLGKECPSQASPQRVQFLDGIPLTQVAAGGAHSFALSLSGASFG- 204
Query: 139 ISTSRLWVWGQN-------QGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSE 184
WG N + N P + + P ++ + +SCG H L++
Sbjct: 205 --------WGSNSEGQLALRKKNVPVV--QSSKPCSVDALENLGVVYISCGYEHTAVLTQ 254
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-V 243
G + +G N YGQLG T G +GP++++G ++Q+ CG YH+ A V
Sbjct: 255 TGKVFTFGGNSYGQLGYSPTA-GKEGPQLVEGIDGL---------VSQIDCGSYHTLAYV 304
Query: 244 SENGEVYTWGLG 255
G+V ++G G
Sbjct: 305 YTTGKVVSFGRG 316
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 71/186 (38%), Gaps = 47/186 (25%)
Query: 273 LPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL-------------GP 319
L RR G ++ A G HS L S G L+++G + GQLG
Sbjct: 13 LRRRPAGRGGAELRQAASGERHSLLLLSNGELHSYGDNSHGQLGRRDVQRQEQPKRIPAL 72
Query: 320 QTRSFSLIP-------------------------------NESDTYFRNIPILVVPNGVQ 348
+T L+ NE + R I L +Q
Sbjct: 73 ETLRVDLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFNEINLIPRKIKTLTDIKIIQ 132
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGG 406
V+CGH H+L DGR+ WG NS+GQ K + P V + G + ++AAGG
Sbjct: 133 -VSCGHHHSLALSEDGRLFTWGSNSHGQLGLGKECPSQASPQRVQFLDGIPLTQVAAGGA 191
Query: 407 HSAVLA 412
HS L+
Sbjct: 192 HSFALS 197
>gi|50978834|ref|NP_001003126.1| X-linked retinitis pigmentosa GTPase regulator [Canis lupus
familiaris]
gi|23396836|sp|Q9N1T2.1|RPGR_CANFA RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
Flags: Precursor
gi|8131936|gb|AAF73144.1|AF148801_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
familiaris]
Length = 1003
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 109/351 (31%), Positives = 170/351 (48%), Gaps = 30/351 (8%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++CG EHTA V + L+ +G+N +GQLG G++ P VK L+ E VK +CG + T
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99
Query: 127 AAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
E + G + +L + + S F + + FT I Q+S GS AL+E
Sbjct: 100 LVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISF--FTSQRKIKQLSAGSNTSAALTE 157
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G L WG N GQ+G +V G + I+ +SCG YHSA V+
Sbjct: 158 DGELFMWGDNSEGQIGLENVTNVCVPQQVTVG-----------KPISWISCGYYHSAFVT 206
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
G++YT+G G+LG Q +P+ V + G ++ VACGG H+ LT K A+
Sbjct: 207 TEGQLYTFGEPECGKLG-LPNQLLVNHRMPQPVPGIPGKVVQ-VACGGGHTVVLTEK-AV 263
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 364
Y +G Q GQLGLG T F ++ + ++ + +ACG +HT + G
Sbjct: 264 YTFGLGQFGQLGLG--TFLFETSVPKAIEHIKD-------QKISFIACGENHTALITDMG 314
Query: 365 RIHGWGYNSYGQ--AANEKSTYAWYPSP-VDWCVGEVRKLAAGGGHSAVLA 412
++ +G +G+ E ST + P+ ++ V+ ++ GG H+ V A
Sbjct: 315 LMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHTLVFA 365
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 124/286 (43%), Gaps = 51/286 (17%)
Query: 144 LWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
++ +G+ Q N P FW N + +SCG H ++ L +G N +GQLG G
Sbjct: 14 VFTFGKTQFAENIPSKFWFR---NDVPTFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLG 70
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
+ + P +K A + EK+ +CG H+ +E G+VY G + GQLG
Sbjct: 71 -SKSTVSKPTCVK--------ALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLG- 120
Query: 263 CSLQSGDKELLPRRVVALDGIF-----IKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GD E R L F IK ++ G S ALT G L+ WG + GQ+GL
Sbjct: 121 ----LGDTE--ERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGL 174
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQL------VACGHSHTLVYMRDGRIHGWGY 371
N+ + VP V + ++CG+ H+ +G+++ +G
Sbjct: 175 ------------------ENVTNVCVPQQVTVGKPISWISCGYYHSAFVTTEGQLYTFGE 216
Query: 372 NSYGQ--AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADAC 415
G+ N+ P PV G+V ++A GGGH+ VL +
Sbjct: 217 PECGKLGLPNQLLVNHRMPQPVPGIPGKVVQVACGGGHTVVLTEKA 262
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 103/233 (44%), Gaps = 47/233 (20%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+++WG N GQ G + + +P+Q+ G W I+CG+ H+A V ++G
Sbjct: 161 LFMWGDNSEGQIGLENV-TNVCVPQQV-------TVGKPISW--ISCGYYHSAFVTTEGQ 210
Query: 83 LFTWGANEFGQLGDGTEEGRKH--PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
L+T+G E G+LG + H P+ V + + V+ ++CG T + E
Sbjct: 211 LYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKVVQ-VACGGGHTVVLTE--------- 260
Query: 141 TSRLWVWGQNQGSNFPRLFWGAF-----TPNTI-------ICQVSCGSVHVVALSECGLL 188
++ +G Q F +L G F P I I ++CG H +++ GL+
Sbjct: 261 -KAVYTFGLGQ---FGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLM 316
Query: 189 QAWGYNEYGQLGRGITCEGLQG-PRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
+G +G+LG G+ Q P + + +F+ + VSCG H+
Sbjct: 317 YTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFI--------VQLVSCGGCHT 361
>gi|255539128|ref|XP_002510629.1| guanine nucleotide exchange factor P532, putative [Ricinus
communis]
gi|223551330|gb|EEF52816.1| guanine nucleotide exchange factor P532, putative [Ricinus
communis]
Length = 450
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 109/354 (30%), Positives = 163/354 (46%), Gaps = 56/354 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
I++WG G+ G G E + +P L P L PA +A G H+ A+ S G
Sbjct: 127 IWIWGKGDGGRLGF-GHENPVFVPT-LNPNL--DPAKC------VALGGVHSVALTSLGQ 176
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+FTWG FG LG P V+ + +E ++ I+ TAAI E T
Sbjct: 177 VFTWGYGGFGALGHCVYHRELLPRLVQGISNEKIRHIATSGTHTAAITE---------TG 227
Query: 143 RLWVWGQNQGSNFPRLFW--------GAFTPNTI------ICQVSCGSVHVVALSECGLL 188
++ WG+++G L G P+ + + V CG L+E G +
Sbjct: 228 EVYTWGRDEGDGRLGLGPGRGPNEGGGLSIPSKVKALTVPVAAVFCGGFFTAVLTEEGQI 287
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE--KITQVSCGEYHSAAVSEN 246
WG N +LGRG G Q P+ I P LE ++ Q++ G YHS A+++
Sbjct: 288 WNWGANSNYELGRGNKTGGWQ-PKPI----------PNLEGVRVIQIASGGYHSLALTDE 336
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
G+V +WG G GQLGH S+Q+ + +P + AL + +ACGG S A+T +G LY
Sbjct: 337 GKVLSWGFGGHGQLGHPSIQN---QKIPMVIDALADQRVVYIACGGSTSAAITDEGKLYM 393
Query: 307 WGGSQAGQLGLG--PQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 358
WG ++ QLG+ P+ + P + F + P+ V VA G SH +
Sbjct: 394 WGNAKDSQLGVPGLPEVQ-----PCPVEVVFLMEDDGLGPHKVLSVAVGASHAM 442
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 109/375 (29%), Positives = 158/375 (42%), Gaps = 72/375 (19%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQ---SEFVKS--------------------- 118
L +WG GQLG G EE R +P V L S F S
Sbjct: 49 LLSWGRGSSGQLGGGIEETRLYPSPVANLHALPSSFSLSPTPGQLLIKNQNSTITKQEAI 108
Query: 119 ---ISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNF-----PRLFWGAFTPNTIIC 170
ISCG +A + DG I W+WG+ G +F PN
Sbjct: 109 EVGISCGLFHSALLV-----DGNI-----WIWGKGDGGRLGFGHENPVFVPTLNPNLDPA 158
Query: 171 Q-VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK 229
+ V+ G VH VAL+ G + WGY +G LG + L PR+++G + EK
Sbjct: 159 KCVALGGVHSVALTSLGQVFTWGYGGFGALGHCVYHRELL-PRLVQGISN--------EK 209
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGL----GSVGQLGHCSLQSGDKELLPRRVVALDGIFI 285
I ++ H+AA++E GEVYTWG G +G G +P +V AL + +
Sbjct: 210 IRHIATSGTHTAAITETGEVYTWGRDEGDGRLGLGPGRGPNEGGGLSIPSKVKALT-VPV 268
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
V CGG + LT +G ++ WG + +LG G +T + P IP L
Sbjct: 269 AAVFCGGFFTAVLTEEGQIWNWGANSNYELGRGNKTGGWQPKP---------IPNL---E 316
Query: 346 GVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLA 402
GV++ +A G H+L +G++ WG+ +GQ + P +D + V +A
Sbjct: 317 GVRVIQIASGGYHSLALTDEGKVLSWGFGGHGQLGHPSIQNQKIPMVIDALADQRVVYIA 376
Query: 403 AGGGHSAVLADACSL 417
GG SA + D L
Sbjct: 377 CGGSTSAAITDEGKL 391
>gi|449280347|gb|EMC87674.1| RCC1 and BTB domain-containing protein 2, partial [Columba livia]
Length = 531
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 117/233 (50%), Gaps = 24/233 (10%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HVV +E G + WG+N Y QLG G T G +V +K+ +V+CG
Sbjct: 91 HVVLATEEGEVYTWGHNAYSQLGNGTTNHGFVPCQVSTNLVN--------KKVIEVACGS 142
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHSC 296
+HS ++ +GEVYTWG + GQ+G S + + +PRRV + L + ++ACG + S
Sbjct: 143 HHSMVLTSDGEVYTWGYNNSGQVGSGSTAN---QPIPRRVTSCLQNKIVVNIACGQMCSM 199
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G +Y WG + GQLGLG + + R VQ VACG++H
Sbjct: 200 AVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR----------VQRVACGYAH 249
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
TLV +G+I+ WG NSYGQ + YP+ V V + R + HSA
Sbjct: 250 TLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTV--VVDKDRVIEIAACHSA 300
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 139/313 (44%), Gaps = 44/313 (14%)
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTA 127
G+E A +D +F G N G LG G + P ++ L + + +S G+ H
Sbjct: 36 GNEVLYATEND-EVFVLGMNCSGCLGTGDMQSTIEPRRLDSLCGKKIACLSYGSGPHVVL 94
Query: 128 AIAEPRENDGTISTSRLWVWGQNQGSNFPR-LFWGAFTP--------NTIICQVSCGSVH 178
A E ++ WG N S F P N + +V+CGS H
Sbjct: 95 ATEE----------GEVYTWGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHH 144
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
+ L+ G + WGYN GQ+G G T RV + + ++CG+
Sbjct: 145 SMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKI--------VVNIACGQM 196
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
S AV ENGEVY WG GQLG L S + P R+ AL GI ++ VACG H+ L
Sbjct: 197 CSMAVVENGEVYVWGYNGNGQLG---LGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVL 253
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT- 357
T +G +YAWG + GQLG G N+S+ + ++ +++ AC +HT
Sbjct: 254 TDEGQIYAWGANSYGQLGTG----------NKSNQSYPTTVVVDKDRVIEIAACHSAHTS 303
Query: 358 LVYMRDGRIHGWG 370
+ G+++ WG
Sbjct: 304 AAKTQSGQVYMWG 316
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 113/241 (46%), Gaps = 35/241 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG+N Q G G +P Q+ L N + +++ACG H+ + SDG
Sbjct: 101 VYTWGHNAYSQLG-NGTTNHGFVPCQVSTNL------VNKKVIEVACGSHHSMVLTSDGE 153
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
++TWG N GQ+G G+ + P +V LQ++ V +I+CG C+ A+ E E
Sbjct: 154 VYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGE------- 206
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N N P A + +V+CG H + L++ G + AWG
Sbjct: 207 --VYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGA 264
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH-SAAVSENGEVYTW 252
N YGQLG G V+ + ++ A +C H SAA +++G+VY W
Sbjct: 265 NSYGQLGTGNKSNQSYPTTVVVDKDRVIEIA---------ACHSAHTSAAKTQSGQVYMW 315
Query: 253 G 253
G
Sbjct: 316 G 316
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 70/151 (46%), Gaps = 20/151 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G Q P A R +ACG+ HT + +G
Sbjct: 207 VYVWGYNGNGQLGLGSSGNQ--------PTPCRIAALQGIRVQRVACGYAHTLVLTDEGQ 258
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
++ WGAN +GQLG G + + +P V + ++ +C AH +AA + +
Sbjct: 259 IYAWGANSYGQLGTGNKSNQSYPTTVVVDKDRVIEIAACHSAHTSAAKTQ---------S 309
Query: 142 SRLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
++++WGQ +G + P L A T + C
Sbjct: 310 GQVYMWGQCRGQSVILPHLTHFACTDDVFAC 340
>gi|443688897|gb|ELT91442.1| hypothetical protein CAPTEDRAFT_169244 [Capitella teleta]
Length = 1060
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 159/363 (43%), Gaps = 80/363 (22%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQ-LRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
KS++ WG GQ G G E + + +P+++ + N + IACG +HT V
Sbjct: 8 KSSVLCWGSLTHGQLGLGGLEEETVTLPREIR-------SFCNVEVVHIACGLQHTLFVK 60
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG + + G N++GQLG E+ K P + L V S G + + +
Sbjct: 61 KDGRVLSCGNNDYGQLGH--EKPCKRPALIDSLGERNVLQASSGTKHSTVLTD------- 111
Query: 139 ISTSRLWVWGQNQ------------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
+++ WG N+ ++ PR+ G + + QV+CGS H V L+ G
Sbjct: 112 --AGQVFTWGSNEDNQLGRGQVDSASTSIPRMVRG--LADHKVVQVACGSAHTVGLTATG 167
Query: 187 LLQAWGYNEYGQLGRG----------ITC-EGLQGPRVIKGYAKFL-------------- 221
+ WG N +GQLG ++C GL RV G L
Sbjct: 168 QIYTWGSNNHGQLGLANKTPQNEPQWVSCISGLPIVRVAAGADHNLVLTISGALFAWGCN 227
Query: 222 ---------DE---APELEK------ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHC 263
D+ AP L K I ++CG+ HS A++ +G V+T+G G GQLGH
Sbjct: 228 SFGQLGVGDDQDRGAPTLVKTLRNQGICALACGDDHSLALTRDGGVFTFGAGMYGQLGH- 286
Query: 264 SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA-LTSKGALYAWGGSQAGQLGLGPQTR 322
+ + ELLPR+V L G + +ACG HS A + S G +Y +G GQLG G
Sbjct: 287 --NTSNNELLPRKVFELMGSSVTQIACGRKHSIAYVPSSGRVYVFGLGGNGQLGTGSTVN 344
Query: 323 SFS 325
S
Sbjct: 345 RMS 347
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 107/248 (43%), Gaps = 23/248 (9%)
Query: 166 NTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAP 225
N + ++CG H + + + G + + G N+YGQLG C + P +I +
Sbjct: 43 NVEVVHIACGLQHTLFVKKDGRVLSCGNNDYGQLGHEKPC---KRPALIDSLGE------ 93
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFI 285
+ Q S G HS +++ G+V+TWG QLG + S + PR V L +
Sbjct: 94 --RNVLQASSGTKHSTVLTDAGQVFTWGSNEDNQLGRGQVDSASTSI-PRMVRGLADHKV 150
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
VACG H+ LT+ G +Y WG + GQLGL +T P + I L +
Sbjct: 151 VQVACGSAHTVGLTATGQIYTWGSNNHGQLGLANKT------PQNEPQWVSCISGLPIVR 204
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAG 404
VA G H LV G + WG NS+GQ P+ V + + LA G
Sbjct: 205 ----VAAGADHNLVLTISGALFAWGCNSFGQLGVGDDQDRGAPTLVKTLRNQGICALACG 260
Query: 405 GGHSAVLA 412
HS L
Sbjct: 261 DDHSLALT 268
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A IY WG N+ GQ G + Q P+ C +G + +A G +H
Sbjct: 163 LTATGQIYTWGSNNHGQLGLANKTPQNE------PQWVSCISGL--PIVRVAAGADHNLV 214
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ G LF WG N FGQLG G ++ R P VK L+++ + +++CG + A+ D
Sbjct: 215 LTISGALFAWGCNSFGQLGVGDDQDRGAPTLVKTLRNQGICALACGDDHSLALTR----D 270
Query: 137 GTISTSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQA 190
G + T ++GQ N +N PR + + + Q++CG H +A + G +
Sbjct: 271 GGVFTFGAGMYGQLGHNTSNNELLPRKVFELM--GSSVTQIACGRKHSIAYVPSSGRVYV 328
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKG 216
+G GQLG G T + P ++KG
Sbjct: 329 FGLGGNGQLGTGSTVNRM-SPAMVKG 353
>gi|156372872|ref|XP_001629259.1| predicted protein [Nematostella vectensis]
gi|156216255|gb|EDO37196.1| predicted protein [Nematostella vectensis]
Length = 4220
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 169/354 (47%), Gaps = 58/354 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ G + +G+ G + +P+Q+ + R + + G H A+ +G
Sbjct: 2475 VFACGESTNGRLGLGPLSANVTVPRQIENL-----SSFMVRKVSVHSGGRHAMALTIEGK 2529
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LF+WG E G+LG G HP+ + +S V+ +SCG+ +AAI +S+
Sbjct: 2530 LFSWGEGEDGKLGHGNRMNCDHPKLIDTFKSSCVRDMSCGSSHSAAI---------LSSG 2580
Query: 143 RLWVWGQNQ------GSNFPRL---FWGAFTPNTIICQVSCGS--VHVVALSECGLLQAW 191
L+ WG + G N+ L +FT + +I ++CGS +AL++ G + +W
Sbjct: 2581 ELYTWGLGEYGRLGHGDNYTHLKPKKVQSFTSHRVI-DIACGSRDAQTLALTDDGTVWSW 2639
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G ++G+LGRG EG P + E + + + +V+CG S A+S +G V+T
Sbjct: 2640 GDGDFGKLGRG-GSEGCSVPNPV--------EKLQGQGVCKVACGAQFSLALSTSGLVWT 2690
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG G +LGH + K P+ V L G I DVA G +H A+T G ++AWG +
Sbjct: 2691 WGKGDYYRLGHGNDTHVRK---PQIVDGLRGKKIVDVAVGALHCLAVTDSGQVFAWGDND 2747
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ-----LVACGHSHTLVY 360
GQ G N + T R P LV NG++ VACG SH++ +
Sbjct: 2748 HGQQG------------NNTTTVNRR-PQLV--NGLEGQKITRVACGSSHSIAW 2786
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 144/305 (47%), Gaps = 53/305 (17%)
Query: 72 EHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
+H A+ +G +++WG+ + G+LG G R+ P V L + V ISCG+ +AA+
Sbjct: 27 KHFLALTREGEVYSWGSGDGGKLGHGDTSPREEPTLVTGLAGKQVIRISCGSTHSAAVT- 85
Query: 132 PRENDGTISTSRLWVWGQNQGSNFPRLFWGA----FTPNTI-------ICQVSCGS--VH 178
S L+ WG+ N+ RL G+ P + I V+CGS H
Sbjct: 86 --------SEGELYTWGRG---NYGRLGHGSSEDQLVPVLVSGLRGHHIIDVACGSGDAH 134
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
+A ++ G + +WG +YG+LGRG +G + P+ I+ + +V CG
Sbjct: 135 TLAAADDGTVWSWGDGDYGKLGRG-GSDGCKNPKSIERLQGL--------GVCKVYCGAQ 185
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
S A++ +G V+TWG G +LGH + D P+ V ALDG + DV+ G +H AL
Sbjct: 186 FSLALTRDGSVWTWGKGEGFRLGH---GTEDHVRHPKLVEALDGKHVVDVSVGSIHCLAL 242
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV---VPNGVQLVACGHS 355
T G +Y WG + GQLG + D R P LV G+ +ACG +
Sbjct: 243 TDAGEVYCWGRNDQGQLG-------------DIDCQIRPEPTLVSGLASKGIVGIACGPA 289
Query: 356 HTLVY 360
+ +
Sbjct: 290 QSFAW 294
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 183/417 (43%), Gaps = 75/417 (17%)
Query: 23 IYVWGYNHSGQTG-RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++VWG N Q G KG ++++P + E G + IA G + AV+ DG
Sbjct: 2423 VFVWGLNDKDQLGGLKGS--KIKVP--VLSEFIGA-----LKVQQIAGGSKTLFAVSHDG 2473
Query: 82 TLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDG 137
+F G + G+LG G P +++ L S V+ +S G H A E
Sbjct: 2474 KVFACGESTNGRLGLGPLSANVTVPRQIENLSSFMVRKVSVHSGGRHAMALTIE------ 2527
Query: 138 TISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
+L+ WG+ + P+L F ++ + +SCGS H A+ G
Sbjct: 2528 ----GKLFSWGEGEDGKLGHGNRMNCDHPKLI-DTFK-SSCVRDMSCGSSHSAAILSSGE 2581
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAVSE 245
L WG EYG+LG G L+ P+ ++ + ++ ++CG + + A+++
Sbjct: 2582 LYTWGLGEYGRLGHGDNYTHLK-PKKVQSFTS--------HRVIDIACGSRDAQTLALTD 2632
Query: 246 NGEVYTWGLGSVGQLGH-----CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
+G V++WG G G+LG CS+ P V L G + VACG S AL++
Sbjct: 2633 DGTVWSWGDGDFGKLGRGGSEGCSV--------PNPVEKLQGQGVCKVACGAQFSLALST 2684
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTL 358
G ++ WG +LG G +DT+ R I+ G ++V A G H L
Sbjct: 2685 SGLVWTWGKGDYYRLGHG------------NDTHVRKPQIVDGLRGKKIVDVAVGALHCL 2732
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADA 414
G++ WG N +GQ N +T P V+ G+ + ++A G HS A++
Sbjct: 2733 AVTDSGQVFAWGDNDHGQQGNNTTTVNRRPQLVNGLEGQKITRVACGSSHSIAWAES 2789
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 145/313 (46%), Gaps = 51/313 (16%)
Query: 63 RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG 122
R + + G +H A+++DG +++WG + G+LG G P ++ L+ + V ISCG
Sbjct: 3442 RKVAVHSGGKHAMALSADGDVYSWGEGDDGKLGHGNRNSCDRPRVIEALRGKGVIDISCG 3501
Query: 123 AHCTAAIAEPRENDGTISTSRLWVWGQ----------NQGSNFPRLFWGAFTPNTIICQV 172
+A I + E L+ WG+ ++ P++ A N +I V
Sbjct: 3502 GSHSACITQNHE---------LYTWGKGRYGRLGHGDSEDQLLPKVV-EALRGNRVI-DV 3550
Query: 173 SCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
+CGS + L++ + +WG +YG+LGRG +G + P ++ +
Sbjct: 3551 ACGSGDAQTLCLTDDDCVWSWGDGDYGKLGRG-GSDGCKIPMKVESLIGL--------GV 3601
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
++V CG S A++ +G VYTWG G +LGH D P+RV AL G + +A
Sbjct: 3602 SKVECGSQFSVALTRSGAVYTWGKGDYYRLGH---GVDDHVRRPKRVAALQGKKVITIAT 3658
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGV 347
G +H A T G +Y WG + GQLG G ++ R P LV +
Sbjct: 3659 GSLHCVASTDTGEVYTWGDNDEGQLGDG-----------TTNAIAR--PRLVTALQGKKI 3705
Query: 348 QLVACGHSHTLVY 360
VACG +HT+ +
Sbjct: 3706 SRVACGSAHTIAW 3718
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 133/291 (45%), Gaps = 41/291 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G P++ P + G A + + I+CG H+AAV S+G
Sbjct: 38 VYSWGSGDGGKLGHGDTS-----PREEPTLVTGL---AGKQVIRISCGSTHSAAVTSEGE 89
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG---AHCTAAIAEPRENDGTI 139
L+TWG +G+LG G+ E + P V L+ + ++CG AH AA +DGT+
Sbjct: 90 LYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDVACGSGDAHTLAA-----ADDGTV 144
Query: 140 STSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
W WG R G P +I +C+V CG+ +AL+ G + W
Sbjct: 145 -----WSWGDGDYGKLGRGGSDGCKNPKSIERLQGLGVCKVYCGAQFSLALTRDGSVWTW 199
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G E +LG G T + ++ P+++ EA + + + VS G H A+++ GEVY
Sbjct: 200 GKGEGFRLGHG-TEDHVRHPKLV--------EALDGKHVVDVSVGSIHCLALTDAGEVYC 250
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
WG GQLG Q + P V L I +ACG S A + G
Sbjct: 251 WGRNDQGQLGDIDCQIRPE---PTLVSGLASKGIVGIACGPAQSFAWSCAG 298
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 125/289 (43%), Gaps = 35/289 (12%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG G+ G R R P + G +DI+CG H+A
Sbjct: 3456 LSADGDVYSWGEGDDGKLGHGNRNSCDR------PRVIEALRGKGV--IDISCGGSHSAC 3507
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ + L+TWG +G+LG G E + P+ V+ L+ V ++CG+ + +D
Sbjct: 3508 ITQNHELYTWGKGRYGRLGHGDSEDQLLPKVVEALRGNRVIDVACGSGDAQTLC--LTDD 3565
Query: 137 GTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
+ W WG R G P + + +V CGS VAL+ G +
Sbjct: 3566 DCV-----WSWGDGDYGKLGRGGSDGCKIPMKVESLIGLGVSKVECGSQFSVALTRSGAV 3620
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG +Y +LG G+ + RV A + +K+ ++ G H A ++ GE
Sbjct: 3621 YTWGKGDYYRLGHGVDDHVRRPKRV---------AALQGKKVITIATGSLHCVASTDTGE 3671
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
VYTWG GQLG + + + PR V AL G I VACG H+ A
Sbjct: 3672 VYTWGDNDEGQLGDGTTNAIAR---PRLVTALQGKKISRVACGSAHTIA 3717
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 141/340 (41%), Gaps = 30/340 (8%)
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAI-AEPRENDGTI 139
GT++ WG N GQLG K P+ ++ L S I G A+ AE +
Sbjct: 3354 GTIYGWGHNHRGQLGSLEGAKVKLPQTIEALASIRPVQIVGGEQTLFAVTAEGKVYATGY 3413
Query: 140 STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
G ++ V G H +ALS G + +WG + G+L
Sbjct: 3414 GHGGRLGLGGTDTVTSIKMLESLQHVVVRKVAVHSGGKHAMALSADGDVYSWGEGDDGKL 3473
Query: 200 GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ 259
G G PRVI EA + + +SCG HSA +++N E+YTWG G G+
Sbjct: 3474 GHG-NRNSCDRPRVI--------EALRGKGVIDISCGGSHSACITQNHELYTWGKGRYGR 3524
Query: 260 LGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQL 315
LGH GD E LLP+ V AL G + DVACG + LT +++WG G+L
Sbjct: 3525 LGH-----GDSEDQLLPKVVEALRGNRVIDVACGSGDAQTLCLTDDDCVWSWGDGDYGKL 3579
Query: 316 GLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
G G IP + ++ ++ GV V CG ++ R G ++ WG Y
Sbjct: 3580 GRG--GSDGCKIPMKVES--------LIGLGVSKVECGSQFSVALTRSGAVYTWGKGDYY 3629
Query: 376 QAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADA 414
+ + + P V G +V +A G H D
Sbjct: 3630 RLGHGVDDHVRRPKRVAALQGKKVITIATGSLHCVASTDT 3669
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 122/256 (47%), Gaps = 43/256 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACG--HEHT 74
+ ++ +Y WG + G+ G E QL P L G + +D+ACG HT
Sbjct: 84 VTSEGELYTWGRGNYGRLGHGSSE------DQLVPVLVSGLRGHH--IIDVACGSGDAHT 135
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
A A DGT+++WG ++G+LG G +G K+P+ +++LQ V + CGA + A+
Sbjct: 136 LAAADDGTVWSWGDGDYGKLGRGGSDGCKNPKSIERLQGLGVCKVYCGAQFSLALT---- 191
Query: 135 NDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSE 184
DG++ W WG+ +G P+L + + VS GS+H +AL++
Sbjct: 192 RDGSV-----WTWGKGEGFRLGHGTEDHVRHPKLVEALDGKHVV--DVSVGSIHCLALTD 244
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G + WG N+ GQLG I C+ P ++ G A + I ++CG S A S
Sbjct: 245 AGEVYCWGRNDQGQLG-DIDCQIRPEPTLVSGLAS--------KGIVGIACGPAQSFAWS 295
Query: 245 ENGEVYTWGLGSVGQL 260
G+ W +G+ Q
Sbjct: 296 CAGQ---WSVGTRLQF 308
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 128/281 (45%), Gaps = 30/281 (10%)
Query: 143 RLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
+++VWG N +GS F + Q++ GS + A+S G + A G +
Sbjct: 2422 KVFVWGLNDKDQLGGLKGSKIKVPVLSEFIGALKVQQIAGGSKTLFAVSHDGKVFACGES 2481
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
G+LG G + PR I+ + F+ + K++ V G H+ A++ G++++WG
Sbjct: 2482 TNGRLGLGPLSANVTVPRQIENLSSFM-----VRKVS-VHSGGRHAMALTIEGKLFSWGE 2535
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
G G+LGH + + D P+ + ++D++CG HS A+ S G LY WG + G+
Sbjct: 2536 GEDGKLGHGNRMNCDH---PKLIDTFKSSCVRDMSCGSSHSAAILSSGELYTWGLGEYGR 2592
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRDGRIHGWGYN 372
LG G +S T R I I ACG + TL DG + WG
Sbjct: 2593 LGHGDNYTHLKPKKVQSFTSHRVIDI----------ACGSRDAQTLALTDDGTVWSWGDG 2642
Query: 373 SYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
+G+ S P+PV+ G+ V K+A G S L+
Sbjct: 2643 DFGKLGRGGSEGCSVPNPVEKLQGQGVCKVACGAQFSLALS 2683
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 115/240 (47%), Gaps = 25/240 (10%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H +AL+ G + +WG + G+LG G T + P ++ G A +++ ++SCG
Sbjct: 28 HFLALTREGEVYSWGSGDGGKLGHGDTSPR-EEPTLVTGLAG--------KQVIRISCGS 78
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHS 295
HSAAV+ GE+YTWG G+ G+LGH S + +L+P V L G I DVACG H+
Sbjct: 79 THSAAVTSEGELYTWGRGNYGRLGH---GSSEDQLVPVLVSGLRGHHIIDVACGSGDAHT 135
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS 355
A G +++WG G+LG G S +S + + GV V CG
Sbjct: 136 LAAADDGTVWSWGDGDYGKLGRG---GSDGCKNPKSIERLQGL-------GVCKVYCGAQ 185
Query: 356 HTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADA 414
+L RDG + WG + + + +P V+ G+ V ++ G H L DA
Sbjct: 186 FSLALTRDGSVWTWGKGEGFRLGHGTEDHVRHPKLVEALDGKHVVDVSVGSIHCLALTDA 245
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 174/402 (43%), Gaps = 56/402 (13%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G ++++P+ + A A+ R + I G + AV ++G
Sbjct: 3355 TIYGWGHNHRGQLGSL-EGAKVKLPQTI-------EALASIRPVQIVGGEQTLFAVTAEG 3406
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
++ G G+LG G + + ++ LQ V+ ++ + A+A + D
Sbjct: 3407 KVYATGYGHGGRLGLGGTDTVTSIKMLESLQHVVVRKVAVHSGGKHAMALSADGD----- 3461
Query: 142 SRLWVWGQ---------NQGS-NFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
++ WG+ N+ S + PR+ I +SCG H +++ L W
Sbjct: 3462 --VYSWGEGDDGKLGHGNRNSCDRPRVIEALRGKGVI--DISCGGSHSACITQNHELYTW 3517
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSENGEV 249
G YG+LG G + + L P+V+ EA ++ V+C G+ + ++++ V
Sbjct: 3518 GKGRYGRLGHGDSEDQLL-PKVV--------EALRGNRVIDVACGSGDAQTLCLTDDDCV 3568
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
++WG G G+LG D +P +V +L G+ + V CG S ALT GA+Y WG
Sbjct: 3569 WSWGDGDYGKLGR---GGSDGCKIPMKVESLIGLGVSKVECGSQFSVALTRSGAVYTWGK 3625
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG--VQLVACGHSHTLVYMRDGRIH 367
+LG G D + R + G V +A G H + G ++
Sbjct: 3626 GDYYRLGHG------------VDDHVRRPKRVAALQGKKVITIATGSLHCVASTDTGEVY 3673
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
WG N GQ + + P V G ++ ++A G H+
Sbjct: 3674 TWGDNDEGQLGDGTTNAIARPRLVTALQGKKISRVACGSAHT 3715
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 31/179 (17%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ GR G + +IP ++ L G + CG + + A+ G
Sbjct: 3568 VWSWGDGDYGKLGRGGSD-GCKIPMKVE-SLIGLGVSK------VECGSQFSVALTRSGA 3619
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIST 141
++TWG ++ +LG G ++ + P++V LQ + V +I+ G+ HC A + T
Sbjct: 3620 VYTWGKGDYYRLGHGVDDHVRRPKRVAALQGKKVITIATGSLHCVA----------STDT 3669
Query: 142 SRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
++ WG N PRL I +V+CGS H +A S C + A
Sbjct: 3670 GEVYTWGDNDEGQLGDGTTNAIARPRLVTA--LQGKKISRVACGSAHTIAWSTCKPVNA 3726
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 55/127 (43%), Gaps = 17/127 (13%)
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV---PNGVQ 348
G H ALT +G +Y+WG G+LG G DT R P LV V
Sbjct: 26 GKHFLALTREGEVYSWGSGDGGKLGHG-------------DTSPREEPTLVTGLAGKQVI 72
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGH 407
++CG +H+ +G ++ WG +YG+ + S P V G + +A G G
Sbjct: 73 RISCGSTHSAAVTSEGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDVACGSGD 132
Query: 408 SAVLADA 414
+ LA A
Sbjct: 133 AHTLAAA 139
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 80/221 (36%), Gaps = 68/221 (30%)
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI---------------------- 283
+G +Y WG GQLG SL+ G K LP+ + AL I
Sbjct: 3353 SGTIYGWGHNHRGQLG--SLE-GAKVKLPQTIEALASIRPVQIVGGEQTLFAVTAEGKVY 3409
Query: 284 ------------------------------FIKDVAC--GGVHSCALTSKGALYAWGGSQ 311
++ VA GG H+ AL++ G +Y+WG
Sbjct: 3410 ATGYGHGGRLGLGGTDTVTSIKMLESLQHVVVRKVAVHSGGKHAMALSADGDVYSWGEGD 3469
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGY 371
G+LG G N + + + GV ++CG SH+ ++ ++ WG
Sbjct: 3470 DGKLGHG----------NRNSCDRPRVIEALRGKGVIDISCGGSHSACITQNHELYTWGK 3519
Query: 372 NSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
YG+ + S P V+ G V +A G G + L
Sbjct: 3520 GRYGRLGHGDSEDQLLPKVVEALRGNRVIDVACGSGDAQTL 3560
>gi|224135109|ref|XP_002327568.1| predicted protein [Populus trichocarpa]
gi|222836122|gb|EEE74543.1| predicted protein [Populus trichocarpa]
Length = 973
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 162/370 (43%), Gaps = 56/370 (15%)
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
+I+ G +H A + G +F WG G+LG + P+ V+ L VKS++CG +
Sbjct: 309 NISLGRKHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPKMVESLDGVHVKSVACGEYQ 368
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQ-GSN-----------FPRLFWGAFTPNTIICQVS 173
T A+ + E L+ WG+N+ G+N PR G T I V+
Sbjct: 369 TCALTDSGE---------LYAWGENKYGANLGCEERSRSQWLPRRISGPLT-GVCILNVA 418
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
CG H +S G L +G +G LG G + P+ ++ L + V
Sbjct: 419 CGDWHTAIVSSSGQLFTYGDGSFGVLGHG-NLLSVSQPKEVESLKGLL--------VKSV 469
Query: 234 SCGEYHSAAVSE-----------NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG 282
+CG +H+AA+ + G+++TWG G G+LGH L +K+LLP V L
Sbjct: 470 ACGSWHTAAIVDIIVDRFKFNGVGGKLFTWGDGDKGRLGHADL---EKKLLPTCVAQLVE 526
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
+ V+CG + + ALT+ G +Y G S GQLG P + S++ E +
Sbjct: 527 LDFDQVSCGRMLTVALTNTGKVYTMGSSVHGQLG-NPHAKDKSIVIVEGK---------L 576
Query: 343 VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKL 401
V+ ++ G H G ++ WG + GQ +P+ V+ +V+ +
Sbjct: 577 KEEFVKEISSGSYHVAALTSSGSLYTWGKGTNGQLGLGNVEDRNFPTLVEALRDMQVQSI 636
Query: 402 AAGGGHSAVL 411
A G +A +
Sbjct: 637 ACGSNLTAAI 646
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 138/287 (48%), Gaps = 29/287 (10%)
Query: 23 IYVWGYNHSG-QTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG N G G + R R +P+++ L G L++ACG HTA V+S G
Sbjct: 378 LYAWGENKYGANLGCEERSRSQWLPRRISGPLTGVCI------LNVACGDWHTAIVSSSG 431
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS- 140
LFT+G FG LG G P++V+ L+ VKS++CG+ TAAI + + +
Sbjct: 432 QLFTYGDGSFGVLGHGNLLSVSQPKEVESLKGLLVKSVACGSWHTAAIVDIIVDRFKFNG 491
Query: 141 -TSRLWVWGQ-NQGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+L+ WG ++G P + QVSCG + VAL+ G +
Sbjct: 492 VGGKLFTWGDGDKGRLGHADLEKKLLPTCVAQLVELDFDQVSCGRMLTVALTNTGKVYTM 551
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + +GQLG P ++ + E + ++S G YH AA++ +G +YT
Sbjct: 552 GSSVHGQLG---------NPHAKDKSIVIVEGKLKEEFVKEISSGSYHVAALTSSGSLYT 602
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
WG G+ GQLG +++ + P V AL + ++ +ACG + A+
Sbjct: 603 WGKGTNGQLGLGNVEDRN---FPTLVEALRDMQVQSIACGSNLTAAI 646
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 109/227 (48%), Gaps = 16/227 (7%)
Query: 191 WGYN-EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
WG E G +G G + + L E+ + +T +S G H+A +++ GEV
Sbjct: 267 WGEGVEVGNIGCVDNQFGYHNTKQVDALLPKLLESTVMLDVTNISLGRKHAALITKRGEV 326
Query: 250 YTWGLGSVGQLGHCSLQSGDKEL-LPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
+ WG GS G+LGH D ++ P+ V +LDG+ +K VACG +CALT G LYAWG
Sbjct: 327 FCWGEGSRGKLGH----KVDMDVSSPKMVESLDGVHVKSVACGEYQTCALTDSGELYAWG 382
Query: 309 GSQAGQLGLGPQTRSFSL-IPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
++ G LG + RS S +P + IL VACG HT + G++
Sbjct: 383 ENKYGA-NLGCEERSRSQWLPRRISGPLTGVCILN-------VACGDWHTAIVSSSGQLF 434
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+G S+G + P V+ G V+ +A G H+A + D
Sbjct: 435 TYGDGSFGVLGHGNLLSVSQPKEVESLKGLLVKSVACGSWHTAAIVD 481
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 104/222 (46%), Gaps = 24/222 (10%)
Query: 155 FPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVI 214
P+L + + +S G H +++ G + WG G+LG + + + P+++
Sbjct: 295 LPKLLESTVMLD--VTNISLGRKHAALITKRGEVFCWGEGSRGKLGHKVDMD-VSSPKMV 351
Query: 215 KGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLP 274
E+ + + V+CGEY + A++++GE+Y WG G C +S + LP
Sbjct: 352 --------ESLDGVHVKSVACGEYQTCALTDSGELYAWGENKYGANLGCEERS-RSQWLP 402
Query: 275 RRVVA-LDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDT 333
RR+ L G+ I +VACG H+ ++S G L+ +G G LG G +L+
Sbjct: 403 RRISGPLTGVCILNVACGDWHTAIVSSSGQLFTYGDGSFGVLGHG------NLLSVSQPK 456
Query: 334 YFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
++ L+V + VACG HT + D + + +N G
Sbjct: 457 EVESLKGLLVKS----VACGSWHTAAIV-DIIVDRFKFNGVG 493
>gi|294868608|ref|XP_002765605.1| hect e3 ubiquitin ligase, putative [Perkinsus marinus ATCC 50983]
gi|239865684|gb|EEQ98322.1| hect e3 ubiquitin ligase, putative [Perkinsus marinus ATCC 50983]
Length = 1287
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 161/350 (46%), Gaps = 46/350 (13%)
Query: 83 LFTWGANEFGQLGDGTEEGR---KHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
++ WG N GQ EEG+ + P++V +L KS+ G T ++E G
Sbjct: 38 VYCWGDNWCGQCLTENEEGKSVVERPQRVCELDRRHPKSLCVGPESTLVVSESGRIYGGG 97
Query: 140 STSRLWVWG---QNQGSNF-PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY-N 194
+ ++ G + S F PRL + + V+CG H VAL+ L WG N
Sbjct: 98 LNEKGYITGPDGDDSESLFKPRLVAYQELEQSFVTAVNCGDHHTVALTSNNLAIGWGRDN 157
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
E+GQ+G G PR++ P+ ++ QV+CG + + E GEVY G
Sbjct: 158 EFGQVGHGQPSIKPMPPRMMV--------TPQ--EVCQVACGGDFTLLLLETGEVYGTGN 207
Query: 255 GSVGQLGHCSLQSGDKELL--PRRVV---ALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
SVGQLG +G+ E + P+ V+ G+ I+ ++ G H+CA++ G L+ WG
Sbjct: 208 NSVGQLG-----TGNTEEITTPKPVLNCGQTYGVPIRQISAGDAHACAISISGVLFTWGS 262
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNI---PILVVP--NGVQLVACGHSHTLVYMRDG 364
++ GQLG + R + P+ +P VQ+ +CG HT ++ G
Sbjct: 263 NRKGQLG-------------RENAGHREVLPGPVSCLPPTKAVQMASCGAQHTAAVVQGG 309
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADA 414
+++ WG N++GQ + P P++ EV + A GGH + D
Sbjct: 310 QVYLWGDNAFGQCGVDAVEEPILPIPINLQSKEVWRTVACGGHHTLFLDV 359
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 123/419 (29%), Positives = 176/419 (42%), Gaps = 73/419 (17%)
Query: 22 AIYVWGYNHSGQ------TGRKGRERQLRI-------PKQLPPELFGCPAGANSRWLDIA 68
A+Y WG N GQ G+ ER R+ PK L
Sbjct: 37 AVYCWGDNWCGQCLTENEEGKSVVERPQRVCELDRRHPKSL------------------C 78
Query: 69 CGHEHTAAVASDGTLFTWGANEFGQL----GDGTEEGRKHPEKV--KQLQSEFVKSISCG 122
G E T V+ G ++ G NE G + GD +E K P V ++L+ FV +++CG
Sbjct: 79 VGPESTLVVSESGRIYGGGLNEKGYITGPDGDDSESLFK-PRLVAYQELEQSFVTAVNCG 137
Query: 123 AHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVAL 182
H T A+ G + G Q S P TP + CQV+CG + L
Sbjct: 138 DHHTVALTSNNLAIGWGRDNEFGQVGHGQPSIKPMPPRMMVTPQEV-CQVACGGDFTLLL 196
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
E G + G N GQLG G T E + P+ + + I Q+S G+ H+ A
Sbjct: 197 LETGEVYGTGNNSVGQLGTGNT-EEITTPKPVLNCGQTYGVP-----IRQISAGDAHACA 250
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI-FIKDVACGGVHSCALTSK 301
+S +G ++TWG GQLG + +G +E+LP V L ++ +CG H+ A+
Sbjct: 251 ISISGVLFTWGSNRKGQLGREN--AGHREVLPGPVSCLPPTKAVQMASCGAQHTAAVVQG 308
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ------LVACGHS 355
G +Y WG + GQ G+ PIL +P +Q VACG
Sbjct: 309 GQVYLWGDNAFGQCGVDAVEE----------------PILPIPINLQSKEVWRTVACGGH 352
Query: 356 HTLVYMRDGRIHGWGYNSYGQAAN--EKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
HTL +G++ G G N GQ + P+ + + V +AAG HSAVLA
Sbjct: 353 HTLFLDVNGQLFGCGSNEDGQLGTGFPGRSSELRPTLMPRSLA-VFSVAAGRSHSAVLA 410
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 14/114 (12%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQ---LPPELFGCPAGANSRWLDIA-CGHE 72
I ++ WG N GQ GR+ + +P LPP ++ + +A CG +
Sbjct: 251 ISISGVLFTWGSNRKGQLGRENAGHREVLPGPVSCLPP----------TKAVQMASCGAQ 300
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
HTAAV G ++ WG N FGQ G E P + E ++++CG H T
Sbjct: 301 HTAAVVQGGQVYLWGDNAFGQCGVDAVEEPILPIPINLQSKEVWRTVACGGHHT 354
>gi|115373014|ref|ZP_01460317.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|310821893|ref|YP_003954251.1| regulator of chromosome condensation [Stigmatella aurantiaca
DW4/3-1]
gi|115369926|gb|EAU68858.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|309394965|gb|ADO72424.1| Regulator of chromosome condensation [Stigmatella aurantiaca
DW4/3-1]
Length = 864
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 117/371 (31%), Positives = 158/371 (42%), Gaps = 65/371 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++ G H+ + S G + WG N GQLGDG+ + R P V L S +K+IS G +
Sbjct: 68 VSAGSYHSLLLRSTGAVLAWGQNNSGQLGDGSTQNRTLPVNVLGLPS--IKAISAGGSYS 125
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG-----------AFTPNTII-----C 170
A+ + ++W WG N + G TP +I+
Sbjct: 126 LAVG---------ADGKVWAWGANNSGQLGTGYLGNGKSGSEYADFQVTPVSIVIPGGAA 176
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV-IKGYAKFLDEAPELEK 229
VS G H +AL++ G L AWG N YGQLG G T L V I G A
Sbjct: 177 AVSGGLNHSLALAKDGKLWAWGANTYGQLGDGTTANRLAPVSVNIPGGA----------- 225
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
++ G YHS A++ +G V+ WG + GQ+G+ G L VVA G I VA
Sbjct: 226 -IAIAAGWYHSLAIARDGRVWAWGRNNSGQVGN----GGTANQLTPVVVAFPGSAIA-VA 279
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
GG HS + S G +++WG + AGQLG G S PI V GV
Sbjct: 280 GGGSHSLVVLSNGTVWSWGANNAGQLGDGSNATRVS-------------PIQVPGIGVAT 326
Query: 350 -VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGG-- 406
VA G +L DG + WG N+ GQ N + P + LA GG
Sbjct: 327 KVAAGGYFSLAITSDG-VWSWGQNTRGQLGNGSLANSSVPVFI---TATSNALALSGGYH 382
Query: 407 HSAVLADACSL 417
HS +L C +
Sbjct: 383 HSLILRPGCPI 393
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 149/334 (44%), Gaps = 51/334 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGR----KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHE 72
+ A ++ WG N+SGQ G G+ Q+ P P GA + ++ G
Sbjct: 128 VGADGKVWAWGANNSGQLGTGYLGNGKSGSEYADFQVTPVSIVIPGGAAA----VSGGLN 183
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
H+ A+A DG L+ WGAN +GQLGDGT R P V +I+ G + + AIA
Sbjct: 184 HSLALAKDGKLWAWGANTYGQLGDGTTANRLAPVSVNIPGGAI--AIAAGWYHSLAIAR- 240
Query: 133 RENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVAL 182
DG R+W WG+N P + AF P + I GS +V L
Sbjct: 241 ---DG-----RVWAWGRNNSGQVGNGGTANQLTPVVV--AF-PGSAIAVAGGGSHSLVVL 289
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
S G + +WG N GQLG G + +V P + T+V+ G Y S A
Sbjct: 290 SN-GTVWSWGANNAGQLGDGSNATRVSPIQV-----------PGIGVATKVAAGGYFSLA 337
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
++ +G V++WG + GQLG+ SL +P + A ++ G HS L
Sbjct: 338 ITSDG-VWSWGQNTRGQLGNGSLA---NSSVPVFITATSNALA--LSGGYHHSLILRPGC 391
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNE-SDTYF 335
++AWG + GQLG G + + E S+T++
Sbjct: 392 PIWAWGFNAYGQLGDGTLVDRLAPVQAEISNTFY 425
>gi|410896622|ref|XP_003961798.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Takifugu
rubripes]
Length = 531
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 141/305 (46%), Gaps = 41/305 (13%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ SD ++ +G N LG G + P+KV L V S+S G+ +A D
Sbjct: 37 ITSDDEVYAFGLNCSNCLGTGDSQCTIVPKKVDILSGRKVVSLSYGSGPHILLAT---ED 93
Query: 137 GTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
G L+ WG N S P L A N + +V+CGS H +AL++ G
Sbjct: 94 G-----ELFAWGHNGYSQLGNGTTNQGVAPVLV-SATLLNRKVTEVACGSHHSMALTDSG 147
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ AWGYN GQ+G G T RV + + CG+ S AV +N
Sbjct: 148 EVYAWGYNNCGQVGSGSTANQPTPRRV--------SSCLQNRVAVSIVCGQTSSLAVVDN 199
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
GEVY WG GQLG L + +L P R+VAL G+ ++ V G HS ALT +G LYA
Sbjct: 200 GEVYGWGYNGNGQLG---LGNNGNQLTPCRLVALQGLCVQQVVSGYAHSLALTDEGLLYA 256
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGR 365
WG + GQLG G ++ S P + T I V++ AC +HT + G+
Sbjct: 257 WGANTYGQLGTGNKSNQLS--PVQIMTEKERI--------VEIAACHSTHTSAAKTQSGQ 306
Query: 366 IHGWG 370
++ WG
Sbjct: 307 VYMWG 311
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 110/242 (45%), Gaps = 37/242 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G Q P + L N + ++ACG H+ A+ G
Sbjct: 96 LFAWGHNGYSQLG-NGTTNQGVAPVLVSATLL------NRKVTEVACGSHHSMALTDSGE 148
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
++ WG N GQ+G G+ + P +V LQ+ SI CG + A+ + E G
Sbjct: 149 VYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNRVAVSIVCGQTSSLAVVDNGEVYG---- 204
Query: 142 SRLWVWGQN------QGSNFPRLFWGAFTPNTIIC--QVSCGSVHVVALSECGLLQAWGY 193
WG N G+N +L +C QV G H +AL++ GLL AWG
Sbjct: 205 -----WGYNGNGQLGLGNNGNQLTPCRLVALQGLCVQQVVSGYAHSLALTDEGLLYAWGA 259
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVYT 251
N YGQLG G L +++ E E+I ++ +C H SAA +++G+VY
Sbjct: 260 NTYGQLGTGNKSNQLSPVQIMT----------EKERIVEIAACHSTHTSAAKTQSGQVYM 309
Query: 252 WG 253
WG
Sbjct: 310 WG 311
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 140/333 (42%), Gaps = 46/333 (13%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G +A I + +Y +G N S G G + +PK++ +G L
Sbjct: 26 VFGTSANEAIYITSDDEVYAFGLNCSNCLG-TGDSQCTIVPKKVD-----ILSGRKVVSL 79
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAH 124
G H DG LF WG N + QLG+GT P V L + V ++CG+H
Sbjct: 80 SYGSG-PHILLATEDGELFAWGHNGYSQLGNGTTNQGVAPVLVSATLLNRKVTEVACGSH 138
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQ------GSN----FPRLFWGAFTPNTIICQVSC 174
+ A+ + E ++ WG N GS PR + N + + C
Sbjct: 139 HSMALTDSGE---------VYAWGYNNCGQVGSGSTANQPTPRRV-SSCLQNRVAVSIVC 188
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G +A+ + G + WGYN GQLG G L R++ A + + QV
Sbjct: 189 GQTSSLAVVDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLV---------ALQGLCVQQVV 239
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG 292
G HS A+++ G +Y WG + GQLG +G+K +L P +++ ++ AC
Sbjct: 240 SGYAHSLALTDEGLLYAWGANTYGQLG-----TGNKSNQLSPVQIMTEKERIVEIAACHS 294
Query: 293 VH-SCALTSKGALYAWGGSQAGQLGLGPQTRSF 324
H S A T G +Y WG + GQ + P F
Sbjct: 295 THTSAAKTQSGQVYMWGQCR-GQSIILPYLTHF 326
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 82/177 (46%), Gaps = 14/177 (7%)
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
H +E+GE++ WG QLG+ + G +L L + +VACG HS AL
Sbjct: 86 HILLATEDGELFAWGHNGYSQLGNGTTNQGVAPVLVS--ATLLNRKVTEVACGSHHSMAL 143
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRN-IPILVVPNGVQLVACGHSHT 357
T G +YAWG + GQ+G G + P + +N + + +V CG + +
Sbjct: 144 TDSGEVYAWGYNNCGQVGSGSTANQPT--PRRVSSCLQNRVAVSIV--------CGQTSS 193
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLAD 413
L + +G ++GWGYN GQ + P + G V+++ +G HS L D
Sbjct: 194 LAVVDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLVALQGLCVQQVVSGYAHSLALTD 250
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 25/177 (14%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHSCALT 299
++ + EVY +GL LG +GD + ++P++V L G + ++ G G H T
Sbjct: 37 ITSDDEVYAFGLNCSNCLG-----TGDSQCTIVPKKVDILSGRKVVSLSYGSGPHILLAT 91
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV----VPNGVQLVACGHS 355
G L+AWG + QLG G + + P+LV + V VACG
Sbjct: 92 EDGELFAWGHNGYSQLGNGTTNQGVA-------------PVLVSATLLNRKVTEVACGSH 138
Query: 356 HTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
H++ G ++ WGYN+ GQ + + P V C+ ++ G ++ LA
Sbjct: 139 HSMALTDSGEVYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNRVAVSIVCGQTSSLA 195
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 18/150 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WGYN +GQ G QL P +L C + G+ H+ A+ +G
Sbjct: 202 VYGWGYNGNGQLGLGNNGNQL-TPCRLVALQGLCVQ-------QVVSGYAHSLALTDEGL 253
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+ WGAN +GQLG G + + P ++ + V+ +C + T+A +
Sbjct: 254 LYAWGANTYGQLGTGNKSNQLSPVQIMTEKERIVEIAACHSTHTSA--------AKTQSG 305
Query: 143 RLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
++++WGQ +G + P L T + C
Sbjct: 306 QVYMWGQCRGQSIILPYLTHFGCTDDVFAC 335
>gi|158300884|ref|XP_552411.3| AGAP011823-PA [Anopheles gambiae str. PEST]
gi|157013375|gb|EAL38855.3| AGAP011823-PA [Anopheles gambiae str. PEST]
Length = 4947
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 165/351 (47%), Gaps = 53/351 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G +G+ G G + PKQ+P + + + + G +H A+ DG
Sbjct: 3082 LYACGEGTNGRLGL-GHNNNVPTPKQVP-----ILSQYVVKKVAVHSGGKHAMALTLDGK 3135
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F+WG E G+LG G + P+ ++ L+++ ++ I+CG+ +AAI S+
Sbjct: 3136 VFSWGEGEDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAIT---------SSG 3186
Query: 143 RLWVWGQNQ------GSNFPRLFWGAFTP--NTIICQVSCGS--VHVVALSECGLLQAWG 192
L+ WG + G N +L T + + QV+CGS + L+E GL+ +WG
Sbjct: 3187 ELYTWGLGEYGRLGHGDNCTQLKPKLVTALQDHRVVQVACGSRDAQTLCLTEDGLVFSWG 3246
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
++G+LGRG EG P + + Q+ CG S A+++ GEV+TW
Sbjct: 3247 DGDFGKLGRG-GSEGCSIPHQVDRLNGV--------GVMQIECGAQFSLALTKAGEVWTW 3297
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G G +LGH + Q K P + L G + VA G +H A+T G +YAWG +
Sbjct: 3298 GKGDYYRLGHGTDQHVRK---PTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDH 3354
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILVV-PNG--VQLVACGHSHTLVY 360
GQ G G +T P LV+ +G V VACG SH++ +
Sbjct: 3355 GQQGSG-------------NTIVNKKPSLVLGLDGIFVNRVACGSSHSVAW 3392
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 177/422 (41%), Gaps = 82/422 (19%)
Query: 16 NIPAKSAIYVWGYNHSGQTG-RKGRERQL----RIPKQLPPELFGCPAGANSRWLDIACG 70
N S + VWG N Q G KG + +L + QL P + IA G
Sbjct: 3023 NDEVSSKVLVWGLNDKEQLGGLKGSKVKLPTYSSVLSQLKP-------------IHIAGG 3069
Query: 71 HEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTA 127
+ V+ DG L+ G G+LG G P++V L VK ++ G H A
Sbjct: 3070 SKSLFIVSQDGKLYACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMA 3129
Query: 128 AIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSV 177
DG +++ WG+ + P+L T I ++CGS
Sbjct: 3130 LTL-----DG-----KVFSWGEGEDGKLGHGNRLTLEKPKLIETLRTKR--IRDIACGSS 3177
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG- 236
H A++ G L WG EYG+LG G C L+ P+++ A + ++ QV+CG
Sbjct: 3178 HSAAITSSGELYTWGLGEYGRLGHGDNCTQLK-PKLVT--------ALQDHRVVQVACGS 3228
Query: 237 -EYHSAAVSENGEVYTWGLGSVGQLGH-----CSLQSGDKELLPRRVVALDGIFIKDVAC 290
+ + ++E+G V++WG G G+LG CS +P +V L+G+ + + C
Sbjct: 3229 RDAQTLCLTEDGLVFSWGDGDFGKLGRGGSEGCS--------IPHQVDRLNGVGVMQIEC 3280
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRN-IPIL-VVPNGVQ 348
G S ALT G ++ WG +LG G +D + R PI + V
Sbjct: 3281 GAQFSLALTKAGEVWTWGKGDYYRLGHG------------TDQHVRKPTPIQGLRGKKVI 3328
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGH 407
VA G H L G+++ WG N +GQ + + PS V G V ++A G H
Sbjct: 3329 HVAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTIVNKKPSLVLGLDGIFVNRVACGSSH 3388
Query: 408 SA 409
S
Sbjct: 3389 SV 3390
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 121/257 (47%), Gaps = 31/257 (12%)
Query: 69 CGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
C H A+AS G +++WG+ + G+LG G ++ P ++ L V + CG+ +AA
Sbjct: 616 CEGRHVLALASSGDVYSWGSGDGGRLGHGDTSAKELPTRIAALADRQVTGVFCGSSYSAA 675
Query: 129 IAEPRENDGTISTSRLWVWGQ----------NQGSNFPRLFWGAFTPNTIICQVSCGSVH 178
I ++ L+ WG+ ++ P L + + CG H
Sbjct: 676 IT---------ASGELYTWGRGTYGRLGHGNSEDKYVPTLVTALKAHRVVHVALGCGDAH 726
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
+ ++E GL AWG ++G+LG +C G P + + P+ + +V G
Sbjct: 727 SLCVTEAGLAFAWGDGDFGKLGNE-SCVGTSVPVQV--------DLPQASCVVKVFSGSQ 777
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
S A++ G VYTWG G G+LGH + + +P+ V AL+G I D+A G H AL
Sbjct: 778 FSVALTREGTVYTWGKGHGGRLGH---GNSEHSPVPKMVQALEGKKIVDLAVGLAHCLAL 834
Query: 299 TSKGALYAWGGSQAGQL 315
T+ G LY WG + Q+
Sbjct: 835 TASGELYGWGRNDFQQI 851
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 130/286 (45%), Gaps = 35/286 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G R+ R P+L +G +DIACG H+A + G
Sbjct: 4197 VFSWGEGEDGKLGHGNRDSYDR------PKLIESLSGIGV--VDIACGSAHSACITIQGH 4248
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ TWG +G+LG G E + P+ V+ L I+CG+ + +++
Sbjct: 4249 VLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDN------ 4302
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
+W WG R G P I + +V CGS VAL+ G + WG
Sbjct: 4303 -VWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKG 4361
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G T + ++ P+ + A + +KI ++ G H A S+ GEV+TWG
Sbjct: 4362 DYHRLGHGNT-DHVRRPKKVA--------ALQGKKIISIATGSLHCVACSDAGEVFTWGD 4412
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
GQLG ++ + + PR V +L G I V CG H+ AL++
Sbjct: 4413 NDEGQLGDGTVSAIQR---PRLVQSLQGKHIVKVICGSAHTLALST 4455
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 121/262 (46%), Gaps = 31/262 (11%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ G +H A++SDG +F+WG E G+LG G + P+ ++ L V I+CG+ +
Sbjct: 4181 VNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIESLSGIGVVDIACGSAHS 4240
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGS 176
A I TI + WG+ + P+L I G
Sbjct: 4241 ACI--------TIQ-GHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGD 4291
Query: 177 VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG 236
+ +++ + +WG +YG+LGRG +G + P I+ A +T+V CG
Sbjct: 4292 AQTLCITDDDNVWSWGDGDYGKLGRG-GSDGCKVPMKIESLAGL--------GVTKVECG 4342
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSC 296
S A++ +G VYTWG G +LGH + D P++V AL G I +A G +H
Sbjct: 4343 SQFSVALTRSGSVYTWGKGDYHRLGH---GNTDHVRRPKKVAALQGKKIISIATGSLHCV 4399
Query: 297 ALTSKGALYAWGGSQAGQLGLG 318
A + G ++ WG + GQLG G
Sbjct: 4400 ACSDAGEVFTWGDNDEGQLGDG 4421
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 114/451 (25%), Positives = 191/451 (42%), Gaps = 69/451 (15%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S I+ WG+NH GQ G G + RI P C A + R + IA G + AV D
Sbjct: 4089 STIFGWGHNHRGQLG--GLDGS-RIKNPTP-----CEALSLLRPIQIAGGEQTLYAVTPD 4140
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDG 137
G L+ G G+LG G + P V+ LQ +K ++ G HC A +DG
Sbjct: 4141 GKLYATGYGAGGRLGVGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLAL-----SSDG 4195
Query: 138 TISTSRLWVWGQNQGSNFPRLFWGAFT-PNTI-------ICQVSCGSVHVVALSECGLLQ 189
+ + WG+ + ++ P I + ++CGS H ++ G +
Sbjct: 4196 EV-----FSWGEGEDGKLGHGNRDSYDRPKLIESLSGIGVVDIACGSAHSACITIQGHVL 4250
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSENG 247
WG YG+LG G + + LQ P++++ + + ++C G+ + ++++
Sbjct: 4251 TWGKGRYGRLGHGDSEDQLQ-PKLVEALLGY--------RAIDIACGSGDAQTLCITDDD 4301
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
V++WG G G+LG D +P ++ +L G+ + V CG S ALT G++Y W
Sbjct: 4302 NVWSWGDGDYGKLGR---GGSDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTW 4358
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGR 365
G +LG G + + R + G ++ +A G H + G
Sbjct: 4359 GKGDYHRLGHG------------NTDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGE 4406
Query: 366 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADACSLKELCEFR 424
+ WG N GQ + + P V G+ + K+ G H+ L+ ++
Sbjct: 4407 VFTWGDNDEGQLGDGTVSAIQRPRLVQSLQGKHIVKVICGSAHTLALS---------TYQ 4457
Query: 425 LAESVTLSNASEIE-DVASRTGSEAL-ARLC 453
L+E+V + +E D+ E L ARL
Sbjct: 4458 LSEAVRPPPSPPLEYDLVRDIAPEVLHARLV 4488
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 114/244 (46%), Gaps = 31/244 (12%)
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
C HV+AL+ G + +WG + G+LG G T + P I A ++T V
Sbjct: 616 CEGRHVLALASSGDVYSWGSGDGGRLGHGDT-SAKELPTRIAALAD--------RQVTGV 666
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA--CG 291
CG +SAA++ +GE+YTWG G+ G+LGH + + + +P V AL + VA CG
Sbjct: 667 FCGSSYSAAITASGELYTWGRGTYGRLGH---GNSEDKYVPTLVTALKAHRVVHVALGCG 723
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNG--VQ 348
HS +T G +AWG G+LG NES ++P+ V +P V
Sbjct: 724 DAHSLCVTEAGLAFAWGDGDFGKLG------------NES-CVGTSVPVQVDLPQASCVV 770
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGH 407
V G ++ R+G ++ WG G+ + S ++ P V G ++ LA G H
Sbjct: 771 KVFSGSQFSVALTREGTVYTWGKGHGGRLGHGNSEHSPVPKMVQALEGKKIVDLAVGLAH 830
Query: 408 SAVL 411
L
Sbjct: 831 CLAL 834
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 109/241 (45%), Gaps = 42/241 (17%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACG--HEHT 74
I + + WG G+ G E QL+ P+L G R +DIACG T
Sbjct: 4243 ITIQGHVLTWGKGRYGRLGHGDSEDQLQ------PKLVEALLGY--RAIDIACGSGDAQT 4294
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
+ D +++WG ++G+LG G +G K P K++ L V + CG+ + A+
Sbjct: 4295 LCITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVTKVECGSQFSVALTR--- 4351
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALS 183
+ ++ WG+ ++ RL G P + I ++ GS+H VA S
Sbjct: 4352 ------SGSVYTWGKG---DYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACS 4402
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ G + WG N+ GQLG G T +Q PR+++ + + I +V CG H+ A+
Sbjct: 4403 DAGEVFTWGDNDEGQLGDG-TVSAIQRPRLVQSL--------QGKHIVKVICGSAHTLAL 4453
Query: 244 S 244
S
Sbjct: 4454 S 4454
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%)
Query: 63 RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG 122
+ + +A G H AV G ++ WG N+ GQ G G K P V L FV ++CG
Sbjct: 3326 KVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTIVNKKPSLVLGLDGIFVNRVACG 3385
Query: 123 AHCTAAIAEPR 133
+ + A + P+
Sbjct: 3386 SSHSVAWSLPQ 3396
>gi|169610477|ref|XP_001798657.1| hypothetical protein SNOG_08337 [Phaeosphaeria nodorum SN15]
gi|160702077|gb|EAT84613.2| hypothetical protein SNOG_08337 [Phaeosphaeria nodorum SN15]
Length = 597
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 117/444 (26%), Positives = 191/444 (43%), Gaps = 73/444 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++V+G +G+ G ++ + I + EL + IA G H A+ D
Sbjct: 169 VFVFGEGANGENGFGATKKAIDIKRPRYNELL-----TKHEVVRIATGGMHVLALTKDNK 223
Query: 83 LFTWGANEFGQLGDGTEEG--------------------------RKHPEKVKQ---LQS 113
+ +WG N+ G LG T++ P + L
Sbjct: 224 ILSWGVNDSGALGRNTKDAVVPTRDLDADDSDSDSEDETGGLIDLEATPTAISDEYFLPD 283
Query: 114 EFVKSISCGAHCTAAIAEP---------RENDGTISTSRLWVWGQNQGSNFPRLFWGAFT 164
I+ G C+ AI R+N+G L G+ + +P+ G
Sbjct: 284 TTFVDIAAGDSCSFAITTEGAVYGWGTFRKNEGI-----LGFKGKGDVAEYPQYIEGV-- 336
Query: 165 PNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGIT----CEGLQGPRVIKGYAKF 220
T Q++CG+ HV L++ G + AWG + QLGR +T EGL +V G+ +
Sbjct: 337 --TKATQIACGTNHVFVLTKDGNVYAWGNGQQNQLGRRLTERNLTEGLFPSKV--GF-RD 391
Query: 221 LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVV 278
L K+ +S G+YH A++E+G V++WG+ + + G+ + D L PR V
Sbjct: 392 LSFKKVSHKLVSISSGDYHGFAIAEDGHVWSWGVNNYCETGYPANAGADDANVLTPRIVA 451
Query: 279 ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRN- 337
+L+G ++ VA G H+ A+T G WG Q GL +T + I +E N
Sbjct: 452 SLEGKQVQQVAAGSHHNIAITKDGQALVWGRCDGSQTGLPSET--LASIDDEKRLMKNNG 509
Query: 338 -IPILVVPNGV----QLVA--CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSP 390
IL+ P + +VA CG H++V +DG+ + WG+++ Q A P+
Sbjct: 510 KPKILIEPTPLSDLKNIVAGSCGPDHSIVIDKDGKAYSWGFSANYQTAQGTDDDIDTPTL 569
Query: 391 VD-WCVGEVRKLAAG-GGHSAVLA 412
+D V +V+ + AG GG VLA
Sbjct: 570 IDNTAVRDVKLVWAGCGGQYGVLA 593
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 128/325 (39%), Gaps = 67/325 (20%)
Query: 17 IPAKSAIYVWGY--NHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHT 74
I + A+Y WG + G G KG+ P+ + ++ IACG H
Sbjct: 299 ITTEGAVYGWGTFRKNEGILGFKGKGDVAEYPQYIE---------GVTKATQIACGTNHV 349
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGR----KHPEKV-------KQLQSEFVKSISCGA 123
+ DG ++ WG + QLG E P KV K++ + V SIS G
Sbjct: 350 FVLTKDGNVYAWGNGQQNQLGRRLTERNLTEGLFPSKVGFRDLSFKKVSHKLV-SISSGD 408
Query: 124 HCTAAIAEPRENDGTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-------IC 170
+ AIAE DG +W WG N +N TP + +
Sbjct: 409 YHGFAIAE----DG-----HVWSWGVNNYCETGYPANAGADDANVLTPRIVASLEGKQVQ 459
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQG----PRVIKGYAK---FLDE 223
QV+ GS H +A+++ G WG + Q G+ E L R++K K ++
Sbjct: 460 QVAAGSHHNIAITKDGQALVWGRCDGSQT--GLPSETLASIDDEKRLMKNNGKPKILIEP 517
Query: 224 AP--ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD 281
P +L+ I SCG HS + ++G+ Y+WG + Q + D L +D
Sbjct: 518 TPLSDLKNIVAGSCGPDHSIVIDKDGKAYSWGFSANYQTAQGTDDDIDTPTL------ID 571
Query: 282 GIFIKDV-----ACGGVHSCALTSK 301
++DV CGG + + K
Sbjct: 572 NTAVRDVKLVWAGCGGQYGVLASKK 596
>gi|410957262|ref|XP_003985250.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Felis catus]
Length = 1031
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 111/367 (30%), Positives = 155/367 (42%), Gaps = 81/367 (22%)
Query: 46 PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHP 105
P+ PE G P G R A G H+ + SDG + + G N GQLG G +
Sbjct: 21 PRTSAPEACG-PGGPELR--QAASGERHSLLLLSDGAVHSCGDNSRGQLG---RRGLQRE 74
Query: 106 EKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTP 165
E+ K +Q+ + T R+ +
Sbjct: 75 EQPKPIQA-------------------------LETLRVEL------------------- 90
Query: 166 NTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAP 225
VSCG H +A+ G + AWG GQLG G E P+ IK
Sbjct: 91 ------VSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEINLIPQKIKTLTGI----- 139
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKEL----LPRRVVALD 281
KI QVSCG YHS A+SE+G+V++WG S GQLG KEL P+RV +LD
Sbjct: 140 ---KIIQVSCGNYHSLALSEDGQVFSWGSNSHGQLGL------GKELPSQASPQRVRSLD 190
Query: 282 GIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL 341
GI + VA GG HS AL+ G + WG + AGQL S + + +
Sbjct: 191 GIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQLAFFGSNVPVQSYKPRSVSALKTL--- 247
Query: 342 VVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL 401
GV ++CGH HT V ++G++ +G NS GQ + + P ++ G V ++
Sbjct: 248 ----GVVYISCGHEHTAVLTQNGKVFTFGDNSCGQLGHSPTAEKTGPQLMEGIEGLVSQI 303
Query: 402 AAGGGHS 408
G H+
Sbjct: 304 DCGSYHT 310
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 57/131 (43%), Gaps = 12/131 (9%)
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP 344
++ A G HS L S GA+++ G + GQLG R P ++ R
Sbjct: 36 LRQAASGERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREEQPKPIQALETLR-------- 87
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ-AANEKSTYAWYPSPVDWCVG-EVRKLA 402
V+LV+CG H+L GR+ WG S GQ E P + G ++ +++
Sbjct: 88 --VELVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEINLIPQKIKTLTGIKIIQVS 145
Query: 403 AGGGHSAVLAD 413
G HS L++
Sbjct: 146 CGNYHSLALSE 156
>gi|355715932|gb|AES05447.1| regulator of chromosome condensation and BTB domain containing
protein 2 [Mustela putorius furo]
Length = 344
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 119/233 (51%), Gaps = 24/233 (10%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H+V + G + WG+N Y QLG G T GL + + +++T+V+CG
Sbjct: 39 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN--------KQVTEVACGS 90
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHSC 296
YHS ++ +GEV+ WG + GQ+G S + +L+PRRV L + ++ACG + S
Sbjct: 91 YHSLVLTSDGEVFAWGYNNSGQVGSGSTAN---QLIPRRVTGCLQNKVVVNIACGQMCSM 147
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ + G +Y WG + GQLGLG + + R VQ VACG++H
Sbjct: 148 AVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR----------VQRVACGYAH 197
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
TLV +G+++ WG NSYGQ + YP+PV V + R + HSA
Sbjct: 198 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPV--VVEKDRIIEIAACHSA 248
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 131/294 (44%), Gaps = 43/294 (14%)
Query: 89 NEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTAAIAEPRENDGTISTSRLWV 146
N G LG G + P +++ L + + +S G+ H A E ++
Sbjct: 2 NCCGCLGLGDVQSTIEPRRLESLNGKKIACLSYGSGPHIVLATTE----------GEVFT 51
Query: 147 WGQNQGSNFPR---------LFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
WG N S N + +V+CGS H + L+ G + AWGYN G
Sbjct: 52 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSG 111
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
Q+G G T L PR + G + + + ++CG+ S AV GEVY WG
Sbjct: 112 QVGSGSTANQLI-PRRVTG-------CLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGN 163
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG L S + P R+ AL GI ++ VACG H+ LT +G +YAWG + GQLG
Sbjct: 164 GQLG---LGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGT 220
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRIHGWG 370
G N+S+ + ++ +++ AC +HT + G ++ WG
Sbjct: 221 G----------NKSNQSYPAPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 264
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 115/243 (47%), Gaps = 39/243 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G +P + L +N + ++ACG H+ + SDG
Sbjct: 49 VFTWGHNAYSQLG-NGTTNHGLVPCHISTNL------SNKQVTEVACGSYHSLVLTSDGE 101
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P +V LQ++ V +I+CG C+ A+ ++T
Sbjct: 102 VFAWGYNNSGQVGSGSTANQLIPRRVTGCLQNKVVVNIACGQMCSMAV---------VNT 152
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N N P A + +V+CG H + L++ G + AWG
Sbjct: 153 GEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 212
Query: 194 NEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G + + P V+ E ++I ++ +C H SAA ++ G VY
Sbjct: 213 NSYGQLGTGNKSNQSYPAPVVV-----------EKDRIIEIAACHSAHTSAAKTQGGHVY 261
Query: 251 TWG 253
WG
Sbjct: 262 MWG 264
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 117/267 (43%), Gaps = 39/267 (14%)
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAHCTAAIAE 131
H ++G +FTWG N + QLG+GT P + L ++ V ++CG++ + +
Sbjct: 39 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTS 98
Query: 132 PRENDGTISTSRLWVWGQNQGSN----------FPRLFWGAFTPNTIICQVSCGSVHVVA 181
E ++ WG N PR G N ++ ++CG + +A
Sbjct: 99 DGE---------VFAWGYNNSGQVGSGSTANQLIPRRVTGCLQ-NKVVVNIACGQMCSMA 148
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
+ G + WGYN GQLG G + R+ A + ++ +V+CG H+
Sbjct: 149 VVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRI---------AALQGIRVQRVACGYAHTL 199
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVH-SCAL 298
+++ G+VY WG S GQLG +G+K + P VV I+ AC H S A
Sbjct: 200 VLTDEGQVYAWGANSYGQLG-----TGNKSNQSYPAPVVVEKDRIIEIAACHSAHTSAAK 254
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFS 325
T G +Y WG + + L P FS
Sbjct: 255 TQGGHVYMWGQCRGQSVTL-PHLTHFS 280
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 20/151 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G Q P A R +ACG+ HT + +G
Sbjct: 155 VYVWGYNGNGQLGLGSSGNQ--------PTPCRIAALQGIRVQRVACGYAHTLVLTDEGQ 206
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
++ WGAN +GQLG G + + +P V + ++ +C AH +AA +
Sbjct: 207 VYAWGANSYGQLGTGNKSNQSYPAPVVVEKDRIIEIAACHSAHTSAAKTQ---------G 257
Query: 142 SRLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 258 GHVYMWGQCRGQSVTLPHLTHFSCTDDVFAC 288
>gi|304318007|ref|YP_003853152.1| S-layer domain-containing protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779509|gb|ADL70068.1| S-layer domain protein [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
Length = 479
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 132/266 (49%), Gaps = 37/266 (13%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
IA G HT A+ +DGT++ WG N+ GQLGDGT R P +VK + V +I+ G + T
Sbjct: 231 IAAGAYHTVALKNDGTVWAWGWNDCGQLGDGTTTNRTIPVQVKGISD--VVAIAAGMYHT 288
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQ----GSNFPRLFWGAFTPNTI-----ICQVSCGSV 177
A+ +NDGT+ W WG N+ G+ + + + TP + + ++ G+
Sbjct: 289 VAL----KNDGTV-----WAWGDNEHDQLGNETTKEEYHS-TPVQVKGISDVKAIAAGAS 338
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
+ V L G + AWG NEYG+LG G T P + G + + ++ G
Sbjct: 339 YTVVLKNDGTVWAWGVNEYGKLGDGTTNNSFT-PVQVNG----------ISNVKAIAAGA 387
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
YH+ + +G V+TWG G+LG+ + P +V + +K +A G H+ A
Sbjct: 388 YHTVVLKNDGTVWTWGYNHYGELGNGTTVDSS---TPVQVKGISD--VKAIAAGACHTVA 442
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRS 323
L + G ++AWG + G+LG G S
Sbjct: 443 LKNDGTVWAWGCNYYGELGNGTAVDS 468
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 120/249 (48%), Gaps = 35/249 (14%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ ++ G+ H VAL G + AWG+N+ GQLG G T P +KG +
Sbjct: 228 VKAIAAGAYHTVALKNDGTVWAWGWNDCGQLGDGTTTNRTI-PVQVKG----------IS 276
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF-IKD 287
+ ++ G YH+ A+ +G V+ WG QLG+ + KE V + GI +K
Sbjct: 277 DVVAIAAGMYHTVALKNDGTVWAWGDNEHDQLGNETT----KEEYHSTPVQVKGISDVKA 332
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG- 346
+A G ++ L + G ++AWG ++ G+LG G SF+ P+ V NG
Sbjct: 333 IAAGASYTVVLKNDGTVWAWGVNEYGKLGDGTTNNSFT-------------PVQV--NGI 377
Query: 347 --VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAG 404
V+ +A G HT+V DG + WGYN YG+ N + + P V + +V+ +AAG
Sbjct: 378 SNVKAIAAGAYHTVVLKNDGTVWTWGYNHYGELGNGTTVDSSTPVQVK-GISDVKAIAAG 436
Query: 405 GGHSAVLAD 413
H+ L +
Sbjct: 437 ACHTVALKN 445
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 120/251 (47%), Gaps = 46/251 (18%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N GQ G G IP Q+ S + IA G HT A+ +DGT
Sbjct: 247 VWAWGWNDCGQLG-DGTTTNRTIPVQVK---------GISDVVAIAAGMYHTVALKNDGT 296
Query: 83 LFTWGANEFGQLGDGT--EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
++ WG NE QLG+ T EE P +VK + VK+I+ GA T + +NDGT+
Sbjct: 297 VWAWGDNEHDQLGNETTKEEYHSTPVQVKGISD--VKAIAAGASYTVVL----KNDGTV- 349
Query: 141 TSRLWVWGQNQGSNFPRLFWG----AFTPNTI-----ICQVSCGSVHVVALSECGLLQAW 191
W WG N+ + +L G +FTP + + ++ G+ H V L G + W
Sbjct: 350 ----WAWGVNE---YGKLGDGTTNNSFTPVQVNGISNVKAIAAGAYHTVVLKNDGTVWTW 402
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
GYN YG+LG G T + P +KG + + ++ G H+ A+ +G V+
Sbjct: 403 GYNHYGELGNGTTVDS-STPVQVKG----------ISDVKAIAAGACHTVALKNDGTVWA 451
Query: 252 WGLGSVGQLGH 262
WG G+LG+
Sbjct: 452 WGCNYYGELGN 462
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 127/289 (43%), Gaps = 51/289 (17%)
Query: 116 VKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQV--- 172
VK+I+ GA+ T A+ +NDGT+ W WG N + +L G T TI QV
Sbjct: 228 VKAIAAGAYHTVAL----KNDGTV-----WAWGWN---DCGQLGDGTTTNRTIPVQVKGI 275
Query: 173 ------SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQG-PRVIKGYAKFLDEAP 225
+ G H VAL G + AWG NE+ QLG T E P +KG
Sbjct: 276 SDVVAIAAGMYHTVALKNDGTVWAWGDNEHDQLGNETTKEEYHSTPVQVKG--------- 326
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFI 285
+ + ++ G ++ + +G V+ WG+ G+LG + + P +V + +
Sbjct: 327 -ISDVKAIAAGASYTVVLKNDGTVWAWGVNEYGKLGDGTT---NNSFTPVQVNGISNV-- 380
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV-P 344
K +A G H+ L + G ++ WG + G+LG G S + P+ V
Sbjct: 381 KAIAAGAYHTVVLKNDGTVWTWGYNHYGELGNGTTVDS-------------STPVQVKGI 427
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDW 393
+ V+ +A G HT+ DG + WG N YG+ N + + P V W
Sbjct: 428 SDVKAIAAGACHTVALKNDGTVWAWGCNYYGELGNGTAVDSSTPVQVKW 476
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 10/87 (11%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WGYNH G+ G + P ++ G S IA G HT A+ +DGT
Sbjct: 399 VWTWGYNHYGELGNG-----TTVDSSTPVQVKGI-----SDVKAIAAGACHTVALKNDGT 448
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVK 109
++ WG N +G+LG+GT P +VK
Sbjct: 449 VWAWGCNYYGELGNGTAVDSSTPVQVK 475
>gi|302855135|ref|XP_002959067.1| hypothetical protein VOLCADRAFT_108456 [Volvox carteri f.
nagariensis]
gi|300255564|gb|EFJ39861.1| hypothetical protein VOLCADRAFT_108456 [Volvox carteri f.
nagariensis]
Length = 942
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 159/330 (48%), Gaps = 39/330 (11%)
Query: 14 VDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEH 73
V P ++ ++ WG + GQ G + RE + PK + L +G + + G +
Sbjct: 244 VRRPPIEAVVFGWGVSEDGQLGVEERE-NVVAPKVVEALLGVQISGRSFCRTPLVAGSRN 302
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEP 132
T A+ + G ++++G N+ G LG G + P+++ L+ + ++ G HC A
Sbjct: 303 TMALDAAGQVWSFGWNDRGTLGHGHRDVETKPKRIPALKGIRIVQVAIGGWHCLAL---- 358
Query: 133 RENDGTISTSRLWVWGQNQGSNFPRLFWG------------AFTPNTIICQVSCGSVHVV 180
+ GT ++ WG N+ + G P+ + QVS G +H +
Sbjct: 359 -SDRGT-----MFAWGGNEYGQCGSVLPGQRDITEPMPVDLGLGPSQRVRQVSAGGMHSL 412
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
AL E G++ WG N +G + ++ PR + + P+ + VSCG +H+
Sbjct: 413 ALLEDGMVWQWGEN-WGDF----SMRPVRTPRPVAVH-------PDEGGVAAVSCGAFHN 460
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
A++ G V +WG+ GQLG+ S PR V+ ++G+ + D+A GG HSCAL+S
Sbjct: 461 LALTAQGRVLSWGMNDYGQLGNGSTTYATT---PRPVLDMEGVVVADIAAGGWHSCALSS 517
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNE 330
G ++ WG + G+LGLG ++ S L P +
Sbjct: 518 AGEVWVWGRGEYGRLGLGDRSGSSKLRPQK 547
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 121/268 (45%), Gaps = 49/268 (18%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +E GQLG E + P+V++ + T + G ++ A+ G+V+
Sbjct: 256 WGVSEDGQLGVE-ERENVVAPKVVEALLGVQISGRSFCR-TPLVAGSRNTMALDAAGQVW 313
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
++G G LGH D E P+R+ AL GI I VA GG H AL+ +G ++AWGG+
Sbjct: 314 SFGWNDRGTLGHGHR---DVETKPKRIPALKGIRIVQVAIGGWHCLALSDRGTMFAWGGN 370
Query: 311 QAGQ------------------LGLGPQTR----------SFSLIP---------NESDT 333
+ GQ LGLGP R S +L+ N D
Sbjct: 371 EYGQCGSVLPGQRDITEPMPVDLGLGPSQRVRQVSAGGMHSLALLEDGMVWQWGENWGDF 430
Query: 334 YFRNI----PILVVPN--GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWY 387
R + P+ V P+ GV V+CG H L GR+ WG N YGQ N +TYA
Sbjct: 431 SMRPVRTPRPVAVHPDEGGVAAVSCGAFHNLALTAQGRVLSWGMNDYGQLGNGSTTYATT 490
Query: 388 PSPV-DWCVGEVRKLAAGGGHSAVLADA 414
P PV D V +AAGG HS L+ A
Sbjct: 491 PRPVLDMEGVVVADIAAGGWHSCALSSA 518
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 147/366 (40%), Gaps = 68/366 (18%)
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC-TAAIAEPRENDGT 138
+ +F WG +E GQLG E P+ V+ L IS + C T +A R
Sbjct: 250 EAVVFGWGVSEDGQLGVEERENVVAPKVVEAL---LGVQISGRSFCRTPLVAGSRNTMAL 306
Query: 139 ISTSRLWVWGQNQGSNFPRLFWGAFT-PNTI-------ICQVSCGSVHVVALSECGLLQA 190
+ ++W +G N T P I I QV+ G H +ALS+ G + A
Sbjct: 307 DAAGQVWSFGWNDRGTLGHGHRDVETKPKRIPALKGIRIVQVAIGGWHCLALSDRGTMFA 366
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAP------ELEKITQVSCGEYHSAAVS 244
WG NEYGQ G V+ G + P +++ QVS G HS A+
Sbjct: 367 WGGNEYGQCGS-----------VLPGQRDITEPMPVDLGLGPSQRVRQVSAGGMHSLALL 415
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV-----VALDGIFIKDVACGGVHSCALT 299
E+G V+ WG GD + P R V D + V+CG H+ ALT
Sbjct: 416 EDGMVWQWGE-----------NWGDFSMRPVRTPRPVAVHPDEGGVAAVSCGAFHNLALT 464
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
++G + +WG + GQLG G T + + P ++ +VV + +A G H+
Sbjct: 465 AQGRVLSWGMNDYGQLGNGSTTYATTPRP------VLDMEGVVVAD----IAAGGWHSCA 514
Query: 360 YMRDGRIHGWGYNSYGQ--AANEKSTYAWYPSPV-----------DWCVGEVRKLAAGGG 406
G + WG YG+ + + P V W + E ++ GG
Sbjct: 515 LSSAGEVWVWGRGEYGRLGLGDRSGSSKLRPQKVRGLESHVVVQGRWVMAEGQEERGGGR 574
Query: 407 HSAVLA 412
HS LA
Sbjct: 575 HSICLA 580
>gi|326914164|ref|XP_003203397.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Meleagris
gallopavo]
Length = 567
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 116/233 (49%), Gaps = 24/233 (10%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HVV +E G + WG+N Y QLG G T GL +V +K+ +V+CG
Sbjct: 127 HVVLATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVN--------KKVIEVACGS 178
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHSC 296
+HS ++ +GEVYTWG + GQ+G S + +PRRV + L + ++ACG + S
Sbjct: 179 HHSMVLTSDGEVYTWGYNNSGQVGS---GSTANQPIPRRVTSCLQNKVVVNIACGQMCSM 235
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G +Y WG + GQLGLG + + R VQ VACG +H
Sbjct: 236 AVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR----------VQRVACGCAH 285
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
TLV +G+I+ WG NSYGQ + YP+ V V + R + HSA
Sbjct: 286 TLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTVT--VDKDRVIEIAACHSA 336
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 136/309 (44%), Gaps = 49/309 (15%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTAAIAEPRE 134
V + +F G N G LG G + P+++ L + + +S G+ H A E
Sbjct: 78 VTENDEVFVLGMNCSGCLGTGDVQSTIEPKRLDSLCGKKIACLSYGSGPHVVLATEE--- 134
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVS------------CGSVHVVAL 182
++ WG N + +L G + CQVS CGS H + L
Sbjct: 135 -------GEVYTWGHNA---YSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVL 184
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
+ G + WGYN GQ+G G T RV + + ++CG+ S A
Sbjct: 185 TSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQN--------KVVVNIACGQMCSMA 236
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
V ENGEVY WG GQLG L S + P R+ AL GI ++ VACG H+ LT +G
Sbjct: 237 VVENGEVYVWGYNGNGQLG---LGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEG 293
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYM 361
+YAWG + GQLG G N+S+ + + +++ AC +HT
Sbjct: 294 QIYAWGANSYGQLGTG----------NKSNQSYPTTVTVDKDRVIEIAACHSAHTSAAKT 343
Query: 362 RDGRIHGWG 370
+ G+++ WG
Sbjct: 344 QSGQVYMWG 352
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 112/241 (46%), Gaps = 35/241 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG+N Q G G +P Q+ L N + +++ACG H+ + SDG
Sbjct: 137 VYTWGHNAYSQLG-NGTTNHGLVPCQVSTNL------VNKKVIEVACGSHHSMVLTSDGE 189
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
++TWG N GQ+G G+ + P +V LQ++ V +I+CG C+ A+ E E
Sbjct: 190 VYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGE------- 242
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N N P A + +V+CG H + L++ G + AWG
Sbjct: 243 --VYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGA 300
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH-SAAVSENGEVYTW 252
N YGQLG G V + ++ A +C H SAA +++G+VY W
Sbjct: 301 NSYGQLGTGNKSNQSYPTTVTVDKDRVIEIA---------ACHSAHTSAAKTQSGQVYMW 351
Query: 253 G 253
G
Sbjct: 352 G 352
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 138/334 (41%), Gaps = 46/334 (13%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G V + ++V G N SG G + + P+ G L
Sbjct: 67 VFGSAGNEVLYVTENDEVFVLGMNCSGCLGTGD------VQSTIEPKRLDSLCGKKIACL 120
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAH 124
G H +G ++TWG N + QLG+GT P +V L ++ V ++CG+H
Sbjct: 121 SYGSG-PHVVLATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSH 179
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSN----------FPRLFWGAFTPNTIICQVSC 174
+ + +DG + T WG N PR N ++ ++C
Sbjct: 180 HSMVLT----SDGEVYT-----WGYNNSGQVGSGSTANQPIPRRVTSCLQ-NKVVVNIAC 229
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G + +A+ E G + WGYN GQLG G + R+ A + ++ +V+
Sbjct: 230 GQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRI---------AALQGIRVQRVA 280
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG 292
CG H+ +++ G++Y WG S GQLG +G+K + P V I+ AC
Sbjct: 281 CGCAHTLVLTDEGQIYAWGANSYGQLG-----TGNKSNQSYPTTVTVDKDRVIEIAACHS 335
Query: 293 VH-SCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
H S A T G +Y WG + GQ + P F+
Sbjct: 336 AHTSAAKTQSGQVYMWGQCR-GQSVVLPHLTHFA 368
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 20/151 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G Q P A R +ACG HT + +G
Sbjct: 243 VYVWGYNGNGQLGLGSSGNQ--------PTPCRIAALQGIRVQRVACGCAHTLVLTDEGQ 294
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
++ WGAN +GQLG G + + +P V + ++ +C AH +AA + +
Sbjct: 295 IYAWGANSYGQLGTGNKSNQSYPTTVTVDKDRVIEIAACHSAHTSAAKTQ---------S 345
Query: 142 SRLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
++++WGQ +G + P L A T + C
Sbjct: 346 GQVYMWGQCRGQSVVLPHLTHFACTDDVFAC 376
>gi|327261091|ref|XP_003215365.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Anolis
carolinensis]
Length = 530
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 153/366 (41%), Gaps = 81/366 (22%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G +A I ++V+G N S G G + +PK+L +G R L
Sbjct: 25 VFGTSANEAIYITHNDEVFVFGLNCSNCLG-TGDNQSTIVPKKLES-----LSGKRIRSL 78
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
G H DG ++ WG N + QLG+GT P +V C
Sbjct: 79 SYGSG-PHVVLSTEDGEVYAWGHNGYSQLGNGTTNQGVTPIQV----------------C 121
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
T + + + +V+CGS H +ALS
Sbjct: 122 TNLLIKK------------------------------------VIEVACGSHHSLALSSD 145
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + AWGYN GQ+G G T PR + + + + ++CG+ S A+ +
Sbjct: 146 GDVYAWGYNNCGQVGSGSTANQ-PTPRKVSN-------CLQTKIVVSIACGQTSSVAIVD 197
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
NGEVY WG GQLG L + +L P RV AL G+ I +ACG H+ ALT +G +Y
Sbjct: 198 NGEVYGWGYNGNGQLG---LGNNGNQLTPCRVAALQGVCIMQIACGYAHTLALTDEGLMY 254
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDG 364
+WG + GQLG G ++ S P + ++ V++ AC +HT + G
Sbjct: 255 SWGANTYGQLGTGNKSNQLS--PGQ--------ILMEKERVVEIAACHSAHTSAAKTQSG 304
Query: 365 RIHGWG 370
++ WG
Sbjct: 305 LVYMWG 310
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 104/203 (51%), Gaps = 28/203 (13%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HVV +E G + AWG+N Y QLG G T +G+ +V ++K+ +V+CG
Sbjct: 85 HVVLSTEDGEVYAWGHNGYSQLGNGTTNQGVTPIQVCTNLL--------IKKVIEVACGS 136
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHSC 296
+HS A+S +G+VY WG + GQ+G S + + PR+V L + +ACG S
Sbjct: 137 HHSLALSSDGDVYAWGYNNCGQVGSGSTAN---QPTPRKVSNCLQTKIVVSIACGQTSSV 193
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQL--VACG 353
A+ G +Y WG + GQLGLG + P V GV + +ACG
Sbjct: 194 AIVDNGEVYGWGYNGNGQLGLGNNGNQLT-------------PCRVAALQGVCIMQIACG 240
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQ 376
++HTL +G ++ WG N+YGQ
Sbjct: 241 YAHTLALTDEGLMYSWGANTYGQ 263
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 19/176 (10%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHSCALT 299
++ N EV+ +GL LG +GD + ++P+++ +L G I+ ++ G G H T
Sbjct: 36 ITHNDEVFVFGLNCSNCLG-----TGDNQSTIVPKKLESLSGKRIRSLSYGSGPHVVLST 90
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
G +YAWG + QLG G N+ T + L++ ++ VACG H+L
Sbjct: 91 EDGEVYAWGHNGYSQLGNGT--------TNQGVTPIQVCTNLLIKKVIE-VACGSHHSLA 141
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE--VRKLAAGGGHSAVLAD 413
DG ++ WGYN+ GQ + + P V C+ V +A G S + D
Sbjct: 142 LSSDGDVYAWGYNNCGQVGSGSTANQPTPRKVSNCLQTKIVVSIACGQTSSVAIVD 197
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 20/151 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WGYN +GQ G QL P ++ C + IACG+ HT A+ +G
Sbjct: 201 VYGWGYNGNGQLGLGNNGNQLT-PCRVAALQGVCI-------MQIACGYAHTLALTDEGL 252
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
+++WGAN +GQLG G + + P ++ + V+ +C AH +AA + +
Sbjct: 253 MYSWGANTYGQLGTGNKSNQLSPGQILMEKERVVEIAACHSAHTSAAKTQ---------S 303
Query: 142 SRLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P + + T + C
Sbjct: 304 GLVYMWGQCRGQSVVLPHVTHFSCTDDVFAC 334
>gi|350418736|ref|XP_003491950.1| PREDICTED: hypothetical protein LOC100748540 [Bombus impatiens]
Length = 791
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 150/339 (44%), Gaps = 71/339 (20%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-A 123
L I CG EH+A + G LF +G+N++GQLG G + P VK L+ E V ++CG A
Sbjct: 39 LSITCGDEHSAVICQTGRLFVFGSNDWGQLGLGHKNHISKPSCVKALKPERVTHVACGRA 98
Query: 124 H---CTAAIAEPRENDGTISTSRLWVWGQNQ-------------GSNFPRLFWGAFTPNT 167
H CT + +++ G +Q N P L + + +
Sbjct: 99 HTLICTGS-------------QKIFACGSDQEGQLGRGISAIGDSVNTPVLVYDSGLSGS 145
Query: 168 IICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL 227
I Q++ GS H +AL+ G + AWG N GQLG + P + P
Sbjct: 146 KIVQIAAGSHHSLALTSDGGVFAWGSNLEGQLGLPDVSGLVNKPTKV--------HIP-- 195
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG---HCSLQSGDKEL-LPRRVVALDGI 283
E + Q+S G YHS ++E+G VY G G+LG S Q K++ LP V
Sbjct: 196 EPVKQISAGYYHSTFLTESGLVYVCGESESGKLGIDASFSTQVAPKQMQLPSPAVH---- 251
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
VACGG H+ L G LY G + +GQLGLG +IP L +
Sbjct: 252 ----VACGGHHTVILAENGNLYCTGSNSSGQLGLGTNLSEL------------HIPKL-L 294
Query: 344 PNG------VQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
P G + ++CG SHT V G+++ G +G+
Sbjct: 295 PRGMLRNETITRISCGESHTAVVTESGKLYTCGDGRHGK 333
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 117/243 (48%), Gaps = 29/243 (11%)
Query: 62 SRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSIS 120
S+ + IA G H+ A+ SDG +F WG+N GQLG G P KV E VK IS
Sbjct: 145 SKIVQIAAGSHHSLALTSDGGVFAWGSNLEGQLGLPDVSGLVNKPTKVH--IPEPVKQIS 202
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNF--PRLFWGAFTPNTI-----ICQVS 173
G + + + E + ++V G+++ F P + V+
Sbjct: 203 AGYYHSTFLTE---------SGLVYVCGESESGKLGIDASFSTQVAPKQMQLPSPAVHVA 253
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVI-KGYAKFLDEAPELEKITQ 232
CG H V L+E G L G N GQLG G L P+++ +G + E IT+
Sbjct: 254 CGGHHTVILAENGNLYCTGSNSSGQLGLGTNLSELHIPKLLPRGMLRN-------ETITR 306
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
+SCGE H+A V+E+G++YT G G G+LG ++ EL V +F+ DVACGG
Sbjct: 307 ISCGESHTAVVTESGKLYTCGDGRHGKLGLEENENNVHELT--FVQRYKELFVSDVACGG 364
Query: 293 VHS 295
H+
Sbjct: 365 CHT 367
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 111/252 (44%), Gaps = 24/252 (9%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ ++CG H + + G L +G N++GQLG G + P +K A + E
Sbjct: 38 VLSITCGDEHSAVICQTGRLFVFGSNDWGQLGLGHKNH-ISKPSCVK--------ALKPE 88
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV--ALDGIFIK 286
++T V+CG H+ + + +++ G GQLG GD P V L G I
Sbjct: 89 RVTHVACGRAHTLICTGSQKIFACGSDQEGQLGRGISAIGDSVNTPVLVYDSGLSGSKIV 148
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPN 345
+A G HS ALTS G ++AWG + GQLGL P+ S N P V +P
Sbjct: 149 QIAAGSHHSLALTSDGGVFAWGSNLEGQLGL----------PDVSG--LVNKPTKVHIPE 196
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGG 405
V+ ++ G+ H+ G ++ G + G+ + S +A GG
Sbjct: 197 PVKQISAGYYHSTFLTESGLVYVCGESESGKLGIDASFSTQVAPKQMQLPSPAVHVACGG 256
Query: 406 GHSAVLADACSL 417
H+ +LA+ +L
Sbjct: 257 HHTVILAENGNL 268
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 96/239 (40%), Gaps = 52/239 (21%)
Query: 23 IYVWGYNHSGQ------TGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
++ WG N GQ +G + ++ IP+ + I+ G+ H+
Sbjct: 166 VFAWGSNLEGQLGLPDVSGLVNKPTKVHIPEPVK---------------QISAGYYHSTF 210
Query: 77 VASDGTLFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
+ G ++ G +E G+LG D + + P+++ QL S V ++CG H T +AE
Sbjct: 211 LTESGLVYVCGESESGKLGIDASFSTQVAPKQM-QLPSPAVH-VACGGHHTVILAE---- 264
Query: 136 DGTISTSRLWVWGQNQ------GSNF-----PRLFWGAFTPNTIICQVSCGSVHVVALSE 184
L+ G N G+N P+L N I ++SCG H ++E
Sbjct: 265 -----NGNLYCTGSNSSGQLGLGTNLSELHIPKLLPRGMLRNETITRISCGESHTAVVTE 319
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
G L G +G+LG + ++ Y + ++ V+CG H+ V
Sbjct: 320 SGKLYTCGDGRHGKLGLEENENNVHELTFVQRYKELF--------VSDVACGGCHTILV 370
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 52/116 (44%), Gaps = 6/116 (5%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N SGQ G +L IPK LP + N I+CG HTA V G
Sbjct: 268 LYCTGSNSSGQLGLGTNLSELHIPKLLPRGML-----RNETITRISCGESHTAVVTESGK 322
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEK-VKQLQSEFVKSISCGAHCTAAIAEPRENDG 137
L+T G G+LG E H V++ + FV ++CG T + + R+ +
Sbjct: 323 LYTCGDGRHGKLGLEENENNVHELTFVQRYKELFVSDVACGGCHTILVGQRRDTNN 378
>gi|8131932|gb|AAF73142.1|AF148799_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
familiaris]
Length = 416
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 109/351 (31%), Positives = 171/351 (48%), Gaps = 30/351 (8%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++CG EHTA V + L+ +G+N +GQLG G++ P VK L+ E VK +CG + T
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99
Query: 127 AAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
E + G + +L + + S F + + FT I Q+S GS AL+E
Sbjct: 100 LVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISF--FTSQRKIKQLSAGSNTSAALTE 157
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G L WG N GQ+G +V G + I+ +SCG YHSA V+
Sbjct: 158 DGELFMWGDNSEGQIGLENVTNVCVPQQVTVG-----------KPISWISCGYYHSAFVT 206
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
G++YT+G G+LG + Q +P+ V + G ++ VACGG H+ LT K A+
Sbjct: 207 TEGQLYTFGEPECGKLGLPN-QLLVNHRMPQPVPGIPGKVVQ-VACGGGHTVVLTEK-AV 263
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 364
Y +G Q GQLGLG T F ++ + ++ + +ACG +HT + G
Sbjct: 264 YTFGLGQFGQLGLG--TFLFETSVPKAIEHIKD-------QKISFIACGENHTALITDMG 314
Query: 365 RIHGWGYNSYGQ--AANEKSTYAWYPSPV-DWCVGEVRKLAAGGGHSAVLA 412
++ +G +G+ E ST + P+ ++ V+ ++ GG H+ V A
Sbjct: 315 LMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHTLVFA 365
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 124/284 (43%), Gaps = 51/284 (17%)
Query: 144 LWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
++ +G+ Q N P FW N + +SCG H ++ L +G N +GQLG G
Sbjct: 14 VFTFGKTQFAENIPSKFW---FRNDVPTFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLG 70
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
+ + P +K A + EK+ +CG H+ +E G+VY G + GQLG
Sbjct: 71 -SKSTVSKPTCVK--------ALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLG- 120
Query: 263 CSLQSGDKELLPRRVVALDGIF-----IKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GD E R L F IK ++ G S ALT G L+ WG + GQ+GL
Sbjct: 121 ----LGDTE--ERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGL 174
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQL------VACGHSHTLVYMRDGRIHGWGY 371
N+ + VP V + ++CG+ H+ +G+++ +G
Sbjct: 175 ------------------ENVTNVCVPQQVTVGKPISWISCGYYHSAFVTTEGQLYTFGE 216
Query: 372 NSYGQAA--NEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLAD 413
G+ N+ P PV G+V ++A GGGH+ VL +
Sbjct: 217 PECGKLGLPNQLLVNHRMPQPVPGIPGKVVQVACGGGHTVVLTE 260
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 104/237 (43%), Gaps = 47/237 (19%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+++WG N GQ G + + +P+Q+ G W I+CG+ H+A V ++G
Sbjct: 161 LFMWGDNSEGQIGLE-NVTNVCVPQQV-------TVGKPISW--ISCGYYHSAFVTTEGQ 210
Query: 83 LFTWGANEFGQLGDGTEEGRKH--PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
L+T+G E G+LG + H P+ V + + V+ ++CG T + E
Sbjct: 211 LYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKVVQ-VACGGGHTVVLTE--------- 260
Query: 141 TSRLWVWGQNQGSNFPRLFWGAF-----TPNTI-------ICQVSCGSVHVVALSECGLL 188
++ +G Q F +L G F P I I ++CG H +++ GL+
Sbjct: 261 -KAVYTFGLGQ---FGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLM 316
Query: 189 QAWGYNEYGQLGRGITCEGLQG-PRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
+G +G+LG G+ Q P + + +F+ + VSCG H+ +
Sbjct: 317 YTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFI--------VQLVSCGGCHTLVFA 365
>gi|428178434|gb|EKX47309.1| hypothetical protein GUITHDRAFT_137494 [Guillardia theta CCMP2712]
Length = 432
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 152/322 (47%), Gaps = 40/322 (12%)
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDG-------TEEGRKHPEKVKQ--LQSEFV 116
++ G E +A TL++WG+ + G+ G G E +K PEKV++ L ++ +
Sbjct: 47 NLIHGREQKVTLAGARTLWSWGSADHGRGGSGGHTDAPIFEVIQKEPEKVEKPVLPAKLI 106
Query: 117 KSISCGAHCTAAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSC 174
K ++CG + + E G +L + S F + I V+
Sbjct: 107 KKVACGGAHSMIVTESGRLLTCGLNDNGQLGLGNLENASEFEEV-----KGTESIADVAA 161
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQ-GPRVIKGYAKFLDEAPELEKITQV 233
G H +A S+ G L AWG N++GQLG T L P+ I L +AP I QV
Sbjct: 162 GFWHTLAASKKGKLYAWGSNKHGQLGHHDTAVKLAVEPQEIL----LLRDAP----IKQV 213
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
+CG YHS A++++GEVYTWG G+ G+LGH S + E +P+RV AL G I + G
Sbjct: 214 ACGSYHSMALTKDGEVYTWGFGAHGRLGHGSTED---EFMPKRVEALVGENISSIHAGFE 270
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG 353
+S A+++ G ++ WG LG G + + + +L P ++ +A G
Sbjct: 271 YSSAVSTSGKVFVWGYGHFYVLGQGDKKDQLAPV------------VLDFPTSIRQLAFG 318
Query: 354 HSHTLVYMRDGRIHGWGYNSYG 375
H G + WG+ ++G
Sbjct: 319 SFHAAAVSHSGMLFTWGHATHG 340
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 117/400 (29%), Positives = 172/400 (43%), Gaps = 50/400 (12%)
Query: 23 IYVWGYNHSGQTGRKGR-ERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++ WG G+ G G + + Q PE P +ACG H+ V G
Sbjct: 64 LWSWGSADHGRGGSGGHTDAPIFEVIQKEPEKVEKPVLPAKLIKKVACGGAHSMIVTESG 123
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
L T G N+ GQLG G E E+VK +S + ++ G T A ++
Sbjct: 124 RLLTCGLNDNGQLGLGNLENASEFEEVKGTES--IADVAAGFWHTLAASK---------K 172
Query: 142 SRLWVWGQN---QGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+L+ WG N Q + A P I I QV+CGS H +AL++ G + W
Sbjct: 173 GKLYAWGSNKHGQLGHHDTAVKLAVEPQEILLLRDAPIKQVACGSYHSMALTKDGEVYTW 232
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G+ +G+LG G T + RV EA E I+ + G +S+AVS +G+V+
Sbjct: 233 GFGAHGRLGHGSTEDEFMPKRV---------EALVGENISSIHAGFEYSSAVSTSGKVFV 283
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG G LG GDK+ VV I+ +A G H+ A++ G L+ WG +
Sbjct: 284 WGYGHFYVLG-----QGDKKDQLAPVVLDFPTSIRQLAFGSFHAAAVSHSGMLFTWGHAT 338
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ---LVACGHSHTLVYMRDGRIHG 368
G LG G ++ + L P +L P +Q VACG HTLV G +
Sbjct: 339 HGPLGHGLKSPNIILEPT----------VLDAPAQLQNSKQVACGSQHTLVVTGTGDVFS 388
Query: 369 WGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGH 407
+G GQ + P + VG+ +R++A G H
Sbjct: 389 FGLGGQGQLGLGSDLDHYEPKQIPRFVGKSLRQVACGLFH 428
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 135/282 (47%), Gaps = 32/282 (11%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG N GQ G +L + Q L P +ACG H+ A+
Sbjct: 172 KGKLYAWGSNKHGQLGHHDTAVKLAVEPQEILLLRDAPIK------QVACGSYHSMALTK 225
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
DG ++TWG G+LG G+ E P++V+ L E + SI G ++A++
Sbjct: 226 DGEVYTWGFGAHGRLGHGSTEDEFMPKRVEALVGENISSIHAGFEYSSAVS--------- 276
Query: 140 STSRLWVWGQ------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++ +++VWG QG +L T I Q++ GS H A+S G+L WG+
Sbjct: 277 TSGKVFVWGYGHFYVLGQGDKKDQLAPVVLDFPTSIRQLAFGSFHAAAVSHSGMLFTWGH 336
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
+G LG GL+ P +I LD +L+ QV+CG H+ V+ G+V+++G
Sbjct: 337 ATHGPLG-----HGLKSPNIIL-EPTVLDAPAQLQNSKQVACGSQHTLVVTGTGDVFSFG 390
Query: 254 LGSVGQLGHCS-LQSGDKELLPRRVVALDGIFIKDVACGGVH 294
LG GQLG S L + + +PR V G ++ VACG H
Sbjct: 391 LGGQGQLGLGSDLDHYEPKQIPRFV----GKSLRQVACGLFH 428
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 124/254 (48%), Gaps = 20/254 (7%)
Query: 168 IICQVSCGS--VH----VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFL 221
+IC++ GS +H V L+ L +WG ++G+ G G + + K K
Sbjct: 38 LICRLHAGSNLIHGREQKVTLAGARTLWSWGSADHGRGGSGGHTDAPIFEVIQKEPEKVE 97
Query: 222 DEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD 281
+ I +V+CG HS V+E+G + T GL GQLG +L++ + V +
Sbjct: 98 KPVLPAKLIKKVACGGAHSMIVTESGRLLTCGLNDNGQLGLGNLENASEF---EEVKGTE 154
Query: 282 GIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL 341
I DVA G H+ A + KG LYAWG ++ GQLG ++ P E R+ PI
Sbjct: 155 SI--ADVAAGFWHTLAASKKGKLYAWGSNKHGQLGHHDTAVKLAVEPQEI-LLLRDAPI- 210
Query: 342 VVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRK 400
+ VACG H++ +DG ++ WG+ ++G+ + + + P V+ VGE +
Sbjct: 211 ------KQVACGSYHSMALTKDGEVYTWGFGAHGRLGHGSTEDEFMPKRVEALVGENISS 264
Query: 401 LAAGGGHSAVLADA 414
+ AG +S+ ++ +
Sbjct: 265 IHAGFEYSSAVSTS 278
>gi|350407907|ref|XP_003488238.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
impatiens]
Length = 539
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 145/313 (46%), Gaps = 48/313 (15%)
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTAAIAE 131
T V D ++ G N +G LG G + +P+K++ L + VK+ + G H A E
Sbjct: 39 TLLVTKDDMVYGIGNNTYGCLGTGDTQSTIYPKKIEALCGKSVKTFAYGKGPHVLALTEE 98
Query: 132 PRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVA 181
+++ WG N P L + + + ++CG H +A
Sbjct: 99 ----------GKVYSWGYNDYCELGNKSTNEGLTPTLV-PSVLDDKFVVDIACGGHHSLA 147
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
L+ G + AWG+N GQ+G G +Q K L+ +K+ +SCG+ S
Sbjct: 148 LTNKGEIYAWGHNVSGQVGCGTILSTVQ------PIPKLLNVGLNGKKVVHISCGDSSSV 201
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
AV+++GEVY+WG VGQLG L + ++ P++V I I+ V CG +H+ AL+ +
Sbjct: 202 AVTDSGEVYSWGHNGVGQLG---LGNCTSQVEPQKVATFAKIVIEKVVCGYMHTLALSDE 258
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG---VQLVACGHSHTL 358
G LY WG + GQLGL T S IP + L VP + +V + H
Sbjct: 259 GVLYVWGANSYGQLGLN--TDSNVWIPTK----------LEVPEMGRILDIVTSHYHHIS 306
Query: 359 VYMRDG-RIHGWG 370
+ M +G RI WG
Sbjct: 307 LAMSEGNRIFMWG 319
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 122/236 (51%), Gaps = 19/236 (8%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HV+AL+E G + +WGYN+Y +LG T EGL P ++ LD+ + + ++CG
Sbjct: 91 HVLALTEEGKVYSWGYNDYCELGNKSTNEGLT-PTLVPS---VLDD----KFVVDIACGG 142
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
+HS A++ GE+Y WG GQ+G ++ S + + V L+G + ++CG S A
Sbjct: 143 HHSLALTNKGEIYAWGHNVSGQVGCGTILSTVQPIPKLLNVGLNGKKVVHISCGDSSSVA 202
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT 357
+T G +Y+WG + GQLGLG T P + T+ + + ++ V CG+ HT
Sbjct: 203 VTDSGEVYSWGHNGVGQLGLGNCTSQVE--PQKVATFAKIV--------IEKVVCGYMHT 252
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLA 412
L +G ++ WG NSYGQ + W P+ ++ +G + + H LA
Sbjct: 253 LALSDEGVLYVWGANSYGQLGLNTDSNVWIPTKLEVPEMGRILDIVTSHYHHISLA 308
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 112/251 (44%), Gaps = 37/251 (14%)
Query: 73 HTAAVASDGTLFTWGANEFGQLGD-GTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
H A+ +G +++WG N++ +LG+ T EG L +FV I+CG H + A+
Sbjct: 91 HVLALTEEGKVYSWGYNDYCELGNKSTNEGLTPTLVPSVLDDKFVVDIACGGHHSLALTN 150
Query: 132 PRENDGTISTSRLWVWGQNQGSN------------FPRLFWGAFTPNTIICQVSCGSVHV 179
E ++ WG N P+L ++ +SCG
Sbjct: 151 KGE---------IYAWGHNVSGQVGCGTILSTVQPIPKLLNVGLNGKKVV-HISCGDSSS 200
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
VA+++ G + +WG+N GQLG G C P+ + +AK + I +V CG H
Sbjct: 201 VAVTDSGEVYSWGHNGVGQLGLG-NCTSQVEPQKVATFAKIV--------IEKVVCGYMH 251
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVH--SCA 297
+ A+S+ G +Y WG S GQLG L + +P ++ + I D+ H S A
Sbjct: 252 TLALSDEGVLYVWGANSYGQLG---LNTDSNVWIPTKLEVPEMGRILDIVTSHYHHISLA 308
Query: 298 LTSKGALYAWG 308
++ ++ WG
Sbjct: 309 MSEGNRIFMWG 319
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 107/246 (43%), Gaps = 42/246 (17%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WGYN + G K L P +P L + +DIACG H+ A+ + G
Sbjct: 101 VYSWGYNDYCELGNKSTNEGLT-PTLVPSVL------DDKFVVDIACGGHHSLALTNKGE 153
Query: 83 LFTWGANEFGQLGDGTEEGRKHP-EKVKQ--LQSEFVKSISCGAHCTAAIAEPRENDGTI 139
++ WG N GQ+G GT P K+ L + V ISCG + A+ + E
Sbjct: 154 IYAWGHNVSGQVGCGTILSTVQPIPKLLNVGLNGKKVVHISCGDSSSVAVTDSGE----- 208
Query: 140 STSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQ 189
++ WG N P+ A +I +V CG +H +ALS+ G+L
Sbjct: 209 ----VYSWGHNGVGQLGLGNCTSQVEPQKV--ATFAKIVIEKVVCGYMHTLALSDEGVLY 262
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH--SAAVSENG 247
WG N YGQLG T + P + E PE+ +I + YH S A+SE
Sbjct: 263 VWGANSYGQLGLN-TDSNVWIPTKL--------EVPEMGRILDIVTSHYHHISLAMSEGN 313
Query: 248 EVYTWG 253
++ WG
Sbjct: 314 RIFMWG 319
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 15/133 (11%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG+N GQ G Q+ P+++ A + CG+ HT A++ +G
Sbjct: 209 VYSWGHNGVGQLGLGNCTSQVE-PQKVA-------TFAKIVIEKVVCGYMHTLALSDEGV 260
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+ WGAN +GQLG T+ P K++ + + I + ++A N
Sbjct: 261 LYVWGANSYGQLGLNTDSNVWIPTKLEVPEMGRILDIVTSHYHHISLAMSEGN------- 313
Query: 143 RLWVWGQNQGSNF 155
R+++WGQ G +
Sbjct: 314 RIFMWGQCLGQSI 326
>gi|159040146|ref|YP_001539399.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
gi|157918981|gb|ABW00409.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
Length = 555
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 134/311 (43%), Gaps = 46/311 (14%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
VASD T+ TWG N+FGQLGDGT P V + G TA +
Sbjct: 51 VASD-TVLTWGENDFGQLGDGTTIDSSTPVDVD---------LPAGTTITAIAGSDANSF 100
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGA--FTPNTIICQVSCGSVHVVALSECGLL 188
ST + WG N G+N R A T + ++ G+ H +AL+ G L
Sbjct: 101 ALTSTGAVLAWGNNTGGELGDGTNTDRTTPVAVKLPTGTTVTAIAVGTFHTLALTSTGAL 160
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
AWG N +G+LG G T + V P IT ++ G HS A++ G
Sbjct: 161 LAWGGNGFGELGDGTTTARNEPVPV---------NVPAGTTITAIAGGRGHSLALTSTGT 211
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
V WG + GQLG + P V G + +A GG +S ALTS G + AWG
Sbjct: 212 VLAWGKNNEGQLGD---GTNANSTTPVDVDLPPGTTVTAIAGGGSNSFALTSAGTVLAWG 268
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNG--VQLVACGHSHTLVYMRDGR 365
+ +GQ+G G T R+ P+ V +P G V +A G H++ G
Sbjct: 269 LNSSGQVGDGTTTD-------------RSTPVDVDLPPGTTVTAIAGGEGHSVALTSAGT 315
Query: 366 IHGWGYNSYGQ 376
+ WG NS GQ
Sbjct: 316 VLAWGLNSSGQ 326
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 145/356 (40%), Gaps = 64/356 (17%)
Query: 22 AIYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
A+ WG N G+ G +R + +LP + IA G HT A+ S
Sbjct: 107 AVLAWGNNTGGELGDGTNTDRTTPVAVKLP---------TGTTVTAIAVGTFHTLALTST 157
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G L WG N FG+LGDGT R P V + +I+ G + A+ S
Sbjct: 158 GALLAWGGNGFGELGDGTTTARNEPVPVNVPAGTTITAIAGGRGHSLAL---------TS 208
Query: 141 TSRLWVWGQNQ--------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
T + WG+N +N P T + ++ G + AL+ G + AWG
Sbjct: 209 TGTVLAWGKNNEGQLGDGTNANSTTPVDVDLPPGTTVTAIAGGGSNSFALTSAGTVLAWG 268
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLD-EAPELEKITQVSCGEYHSAAVSENGEVYT 251
N GQ+G G T + + +D + P +T ++ GE HS A++ G V
Sbjct: 269 LNSSGQVGDGTTTD----------RSTPVDVDLPPGTTVTAIAGGEGHSVALTSAGTVLA 318
Query: 252 WGLGSVGQLGHCSLQSG----DKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
WGL S GQLG + D L P D A G HS ALTS G + AW
Sbjct: 319 WGLNSSGQLGDGTTTDSTTPVDVNLPP------DTTITAITAHDGSHSLALTSTGTILAW 372
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQLVAC--GHSHTLVY 360
G + +G+LG G T R+ P+ V +P G + A G H++
Sbjct: 373 GLNSSGELGDGTTTN-------------RSTPVDVNLPPGTTVTAIDNGDDHSMAL 415
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 122/407 (29%), Positives = 164/407 (40%), Gaps = 57/407 (14%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A + WG N GQ G G P + PAG + IA ++ A+
Sbjct: 52 ASDTVLTWGENDFGQLG-DGTTIDSSTPVDV-----DLPAG--TTITAIAGSDANSFALT 103
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
S G + WG N G+LGDGT R P VK V +I+ G T A+
Sbjct: 104 STGAVLAWGNNTGGELGDGTNTDRTTPVAVKLPTGTTVTAIAVGTFHTLAL--------- 154
Query: 139 ISTSRLWVWGQNQGSNFPRLFWGAFT-----------PNTIICQVSCGSVHVVALSECGL 187
ST L WG G+ F L G T T I ++ G H +AL+ G
Sbjct: 155 TSTGALLAWG---GNGFGELGDGTTTARNEPVPVNVPAGTTITAIAGGRGHSLALTSTGT 211
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWG N GQLG G V + P +T ++ G +S A++ G
Sbjct: 212 VLAWGKNNEGQLGDGTNANSTTPVDV---------DLPPGTTVTAIAGGGSNSFALTSAG 262
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
V WGL S GQ+G + D+ P V G + +A G HS ALTS G + AW
Sbjct: 263 TVLAWGLNSSGQVGDGTTT--DRS-TPVDVDLPPGTTVTAIAGGEGHSVALTSAGTVLAW 319
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGH--SHTLVYMRDGR 365
G + +GQLG G T S + + N+P P+ H SH+L G
Sbjct: 320 GLNSSGQLGDGTTTDSTTPV-------DVNLP----PDTTITAITAHDGSHSLALTSTGT 368
Query: 366 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
I WG NS G+ + +T P V+ G V + G HS L
Sbjct: 369 ILAWGLNSSGELGDGTTTNRSTPVDVNLPPGTTVTAIDNGDDHSMAL 415
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 102/231 (44%), Gaps = 29/231 (12%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG N++GQLG G T I + P IT ++ + +S A++ G V
Sbjct: 59 WGENDFGQLGDGTT---------IDSSTPVDVDLPAGTTITAIAGSDANSFALTSTGAVL 109
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
WG + G+LG + P V G + +A G H+ ALTS GAL AWGG+
Sbjct: 110 AWGNNTGGELGD---GTNTDRTTPVAVKLPTGTTVTAIAVGTFHTLALTSTGALLAWGGN 166
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQL--VACGHSHTLVYMRDGRIH 367
G+LG G T RN P+ V VP G + +A G H+L G +
Sbjct: 167 GFGELGDG-------------TTTARNEPVPVNVPAGTTITAIAGGRGHSLALTSTGTVL 213
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
WG N+ GQ + + + P VD G V +A GG +S L A ++
Sbjct: 214 AWGKNNEGQLGDGTNANSTTPVDVDLPPGTTVTAIAGGGSNSFALTSAGTV 264
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 56/145 (38%), Gaps = 19/145 (13%)
Query: 23 IYVWGYNHSGQ-TGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHE--HTAAVAS 79
+ WG N SGQ + + LPP+ + H+ H+ A+ S
Sbjct: 316 VLAWGLNSSGQLGDGTTTDSTTPVDVNLPPDTT----------ITAITAHDGSHSLALTS 365
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
GT+ WG N G+LGDGT R P V V +I G + A+ P
Sbjct: 366 TGTILAWGLNSSGELGDGTTTNRSTPVDVNLPPGTTVTAIDNGDDHSMALTAPP------ 419
Query: 140 STSRLWVWGQNQGSNFPRLFWGAFT 164
+++ L V N ++ P A T
Sbjct: 420 TSTTLQVTPPNPTADQPVTLTAAVT 444
>gi|390359737|ref|XP_003729552.1| PREDICTED: E3 ubiquitin-protein ligase HERC2, partial
[Strongylocentrotus purpuratus]
Length = 4064
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 154/336 (45%), Gaps = 50/336 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R + R P + G +DIACG H+A V S G
Sbjct: 3289 VYSWGEGEDGKLGHGNRTQCDR------PRVIESLRGKEV--IDIACGGAHSACVTSSGE 3340
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG G E + P+ L+ V ++CG+ + + +++
Sbjct: 3341 LYTWGKGRYGRLGHGDSEDQLRPKMADALKGYRVIDVACGSGDSQTLCISDDDN------ 3394
Query: 143 RLWVWGQNQ-------GSNFPRLFWGAFTPNTI-ICQVSCGSVHVVALSECGLLQAWGYN 194
+W WG GS+ ++ ++I +C+V CGS +AL++ G + WG
Sbjct: 3395 -VWSWGDGDYGKLGRGGSDGCKVPQKVDALSSIGVCKVECGSQFSIALTKSGCVYTWGKG 3453
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR + A + +KI ++ G H A S+ GEVYTWG
Sbjct: 3454 DYHRLGHG-SDDHVRRPRKVA--------ALQGKKIISIATGSLHCVACSDQGEVYTWGD 3504
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL I +VACG H+ AW S+
Sbjct: 3505 NDEGQLGDGTTNAIQR---PRIVTALQDKKITNVACGSAHTV---------AWSTSKPLH 3552
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
G PQT +P E + R + I V+ N + L+
Sbjct: 3553 AGRLPQT-----VPMEYN-LLREVNIPVIRNRLVLL 3582
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 173/419 (41%), Gaps = 78/419 (18%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIAC---GHEHTAA 76
++ ++VWG N Q G R +I + E L + C G +
Sbjct: 2205 QTKVFVWGLNDKDQLGGP---RGSKIKTPVLNEFLSS--------LKVVCCAGGSKSLFV 2253
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPR 133
V ++G ++ G G+LG G+ + P++V L VK ++ G H A +
Sbjct: 2254 VTAEGKVYACGEGTNGRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTVD-- 2311
Query: 134 ENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALS 183
+++ WG+ PRL T I ++CGS H A++
Sbjct: 2312 --------GKVFSWGEGDDGKLGHLSRMNCEKPRLLEALKTKR--IRDIACGSSHSAAVT 2361
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSA 241
G L WG EYG+LG G + L+ P+++K +++ QV+CG + +
Sbjct: 2362 SSGELYTWGLGEYGRLGHGDSTTQLR-PKLVKALVG--------KRVIQVACGSRDAQTL 2412
Query: 242 AVSENGEVYTWGLGSVGQLGH-----CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSC 296
+++ G VY+WG G G+LG CS+ P V L+G + + CG S
Sbjct: 2413 TLTDEGMVYSWGDGDFGKLGRGGSEGCSV--------PHNVERLNGQGVIQIECGAQFSL 2464
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGH 354
ALT G ++ WG +LG G +D++ R + G ++ VA G
Sbjct: 2465 ALTKAGQVWTWGKGDYFRLGHG------------TDSHVRKPQVAEGLKGKKIIHVAVGA 2512
Query: 355 SHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLA 412
H L G++ WG N +GQ + +T P+ V G + ++A G HS A
Sbjct: 2513 LHCLAVTDTGQVFAWGDNDHGQQGDGSTTVNKKPALVQGLEGVRITRVACGSSHSTAWA 2571
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 160/367 (43%), Gaps = 57/367 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y GY SG+ G G + P L + + + + G +H A
Sbjct: 3229 VTADGKLYATGYGASGRLGIGGTD------SVSTPTLLESIQHVHIKKVAVNSGGKHALA 3282
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
++ +G +++WG E G+LG G P ++ L+ + V I+CG +A +
Sbjct: 3283 LSVEGEVYSWGEGEDGKLGHGNRTQCDRPRVIESLRGKEVIDIACGGAHSACVT------ 3336
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG+ + + RL G P + V+CGS + +S
Sbjct: 3337 ---SSGELYTWGKGR---YGRLGHGDSEDQLRPKMADALKGYRVIDVACGSGDSQTLCIS 3390
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ + +WG +YG+LGRG +G + P+ + + + +V CG S A+
Sbjct: 3391 DDDNVWSWGDGDYGKLGRG-GSDGCKVPQKVDALSSI--------GVCKVECGSQFSIAL 3441
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G VYTWG G +LGH S D PR+V AL G I +A G +H A + +G
Sbjct: 3442 TKSGCVYTWGKGDYHRLGH---GSDDHVRRPRKVAALQGKKIISIATGSLHCVACSDQGE 3498
Query: 304 LYAWGGSQAGQLGLGPQT--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
+Y WG + GQLG G + ++ D N VACG +HT+ +
Sbjct: 3499 VYTWGDNDEGQLGDGTTNAIQRPRIVTALQDKKITN------------VACGSAHTVAWS 3546
Query: 362 RDGRIHG 368
+H
Sbjct: 3547 TSKPLHA 3553
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 166/357 (46%), Gaps = 59/357 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A+ +Y G +G+ G G + + IPKQ+ + + + + G H A
Sbjct: 2254 VTAEGKVYACGEGTNGRLGL-GSSQNVDIPKQV-----NGLSQYVVKKVAVHSGGRHAMA 2307
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + + P ++ L+++ ++ I+CG+ +AA+
Sbjct: 2308 LTVDGKVFSWGEGDDGKLGHLSRMNCEKPRLLEALKTKRIRDIACGSSHSAAVT------ 2361
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS + L+
Sbjct: 2362 ---SSGELYTWGLGE---YGRLGHGDSTTQLRPKLVKALVGKRVIQVACGSRDAQTLTLT 2415
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ G++ +WG ++G+LGRG EG P + E + + Q+ CG S A+
Sbjct: 2416 DEGMVYSWGDGDFGKLGRG-GSEGCSVPHNV--------ERLNGQGVIQIECGAQFSLAL 2466
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
++ G+V+TWG G +LGH + K P+ L G I VA G +H A+T G
Sbjct: 2467 TKAGQVWTWGKGDYFRLGHGTDSHVRK---PQVAEGLKGKKIIHVAVGALHCLAVTDTGQ 2523
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV-PNGVQL--VACGHSHT 357
++AWG + GQ G G T P LV GV++ VACG SH+
Sbjct: 2524 VFAWGDNDHGQQGDG-------------STTVNKKPALVQGLEGVRITRVACGSSHS 2567
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 182/428 (42%), Gaps = 67/428 (15%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P + + + R + I G + AV +DG
Sbjct: 3183 IYGWGHNHRGQLG--GIEGAKVKVPTAIE-------SLTSLRPIQIVGGEQTLFAVTADG 3233
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
L+ G G+LG G + P ++ +Q +K ++ + A+A E +
Sbjct: 3234 KLYATGYGASGRLGIGGTDSVSTPTLLESIQHVHIKKVAVNSGGKHALALSVEGE----- 3288
Query: 142 SRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
++ WG+ + PR+ I ++CG H ++ G L W
Sbjct: 3289 --VYSWGEGEDGKLGHGNRTQCDRPRVIESLRGKEVI--DIACGGAHSACVTSSGELYTW 3344
Query: 192 GYNEYGQLGRGITCEGLQGPRV---IKGYAKFLDEAPELEKITQVSC--GEYHSAAVSEN 246
G YG+LG G + + L+ P++ +KGY ++ V+C G+ + +S++
Sbjct: 3345 GKGRYGRLGHGDSEDQLR-PKMADALKGY-----------RVIDVACGSGDSQTLCISDD 3392
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
V++WG G G+LG D +P++V AL I + V CG S ALT G +Y
Sbjct: 3393 DNVWSWGDGDYGKLGR---GGSDGCKVPQKVDALSSIGVCKVECGSQFSIALTKSGCVYT 3449
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDG 364
WG +LG G SD + R + G ++ +A G H + G
Sbjct: 3450 WGKGDYHRLGHG------------SDDHVRRPRKVAALQGKKIISIATGSLHCVACSDQG 3497
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSLKELCEF 423
++ WG N GQ + + P V ++ +A G H+ + + K L
Sbjct: 3498 EVYTWGDNDEGQLGDGTTNAIQRPRIVTALQDKKITNVACGSAHTVAWSTS---KPLHAG 3554
Query: 424 RLAESVTL 431
RL ++V +
Sbjct: 3555 RLPQTVPM 3562
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 148/344 (43%), Gaps = 40/344 (11%)
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI- 139
GT++ WG N GQLG K P ++ L S I G A+ DG +
Sbjct: 3181 GTIYGWGHNHRGQLGGIEGAKVKVPTAIESLTSLRPIQIVGGEQTLFAVTA----DGKLY 3236
Query: 140 -----STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
++ RL + G + S P L + V+ G H +ALS G + +WG
Sbjct: 3237 ATGYGASGRLGIGGTDSVST-PTLLESIQHVHIKKVAVNSGGKHALALSVEGEVYSWGEG 3295
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
E G+LG G + PRVI E+ +++ ++CG HSA V+ +GE+YTWG
Sbjct: 3296 EDGKLGHGNRTQ-CDRPRVI--------ESLRGKEVIDIACGGAHSACVTSSGELYTWGK 3346
Query: 255 GSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHSCAL--TSKGALYAWGGS 310
G G+LGH GD E L P+ AL G + DVACG S L + +++WG
Sbjct: 3347 GRYGRLGH-----GDSEDQLRPKMADALKGYRVIDVACGSGDSQTLCISDDDNVWSWGDG 3401
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWG 370
G+LG G +P + D + GV V CG ++ + G ++ WG
Sbjct: 3402 DYGKLGRG--GSDGCKVPQKVDA--------LSSIGVCKVECGSQFSIALTKSGCVYTWG 3451
Query: 371 YNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
Y + + + P V G ++ +A G H +D
Sbjct: 3452 KGDYHRLGHGSDDHVRRPRKVAALQGKKIISIATGSLHCVACSD 3495
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 133/287 (46%), Gaps = 37/287 (12%)
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++++VWG N +GS F + + + GS + ++ G + A G
Sbjct: 2206 TKVFVWGLNDKDQLGGPRGSKIKTPVLNEFLSSLKVVCCAGGSKSLFVVTAEGKVYACGE 2265
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
G+LG G + + + P+ + G ++++ K V G H+ A++ +G+V++WG
Sbjct: 2266 GTNGRLGLG-SSQNVDIPKQVNGLSQYV------VKKVAVHSGGRHAMALTVDGKVFSWG 2318
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
G G+LGH S + +K PR + AL I+D+ACG HS A+TS G LY WG + G
Sbjct: 2319 EGDDGKLGHLSRMNCEK---PRLLEALKTKRIRDIACGSSHSAAVTSSGELYTWGLGEYG 2375
Query: 314 QLGLGPQTRSFSLIPNESDTYFRNIPILV---VPNGVQLVACG--HSHTLVYMRDGRIHG 368
+LG G +S T R P LV V V VACG + TL +G ++
Sbjct: 2376 RLGHG-----------DSTTQLR--PKLVKALVGKRVIQVACGSRDAQTLTLTDEGMVYS 2422
Query: 369 WGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADA 414
WG +G+ S P V+ G+ V ++ G S L A
Sbjct: 2423 WGDGDFGKLGRGGSEGCSVPHNVERLNGQGVIQIECGAQFSLALTKA 2469
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 84/232 (36%), Gaps = 63/232 (27%)
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLG---------------HCSLQ-----SGDKE 271
Q S G+ H + +V+ WGL QLG SL+ G K
Sbjct: 2192 QRSAGD-HGGSREIQTKVFVWGLNDKDQLGGPRGSKIKTPVLNEFLSSLKVVCCAGGSKS 2250
Query: 272 L-----------------------------LPRRVVALDGIFIKDVAC--GGVHSCALTS 300
L +P++V L +K VA GG H+ ALT
Sbjct: 2251 LFVVTAEGKVYACGEGTNGRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTV 2310
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
G +++WG G+LG S + E + ++ +ACG SH+
Sbjct: 2311 DGKVFSWGEGDDGKLG------HLSRMNCEKPRLLEALKT----KRIRDIACGSSHSAAV 2360
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 411
G ++ WG YG+ + ST P V VG+ V ++A G + L
Sbjct: 2361 TSSGELYTWGLGEYGRLGHGDSTTQLRPKLVKALVGKRVIQVACGSRDAQTL 2412
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 48 QLPPELFGCPAGANSRWLDIACGHE--HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHP 105
QL P+L +++ IA G T AV G LF++G ++G+LG G +G K P
Sbjct: 5 QLTPKLVS--GLKEQKFVHIALGSNDGQTLAVTDTGLLFSFGNGDYGKLGRGGSDGCKLP 62
Query: 106 EKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVW 147
+ V +LQ + CG + + + GT+ T + W
Sbjct: 63 KLVDKLQGQHAVIACCGNQFSVILTK----TGTVYTCLTFAW 100
>gi|294462324|gb|ADE76711.1| unknown [Picea sitchensis]
Length = 390
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 154/346 (44%), Gaps = 36/346 (10%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N G G + P Q+ A N + + A G H AV G
Sbjct: 61 LFTWGWNQRGTLGHPPESKTESTPTQVK-------ALENVKIVQAAIGGWHCLAVDDQGQ 113
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST- 141
+ WG NE+GQ G EE + + K L+ + C + T
Sbjct: 114 AYAWGGNEYGQCG---EEPERKEDGSKVLRRDIAIPQRCAPQLRVRQVAAGGTHSVVLTH 170
Query: 142 -SRLWVWGQNQGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECGLLQAWGYNE 195
+W WGQ + TP + + ++ G+ H +AL E G + AWG NE
Sbjct: 171 NGHVWTWGQPWPPGDIKQI---STPVRVQGLENVQLIAVGAFHNLALLEEGEVWAWGNNE 227
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
YGQLG G T Q P ++G + + + ++ G +HS A++ + EVY WG G
Sbjct: 228 YGQLGTGDTQPRSQ-PVPVQGLSGLI--------LADIAAGGWHSTALTTDAEVYAWGRG 278
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
G+LG +S +++P++V L G I V+CGG HS A T+ G ++++G + G+L
Sbjct: 279 EHGRLGFGDDKS--SKMVPQKVHLLAGETIAQVSCGGTHSVARTADGRIFSYGRADHGRL 336
Query: 316 GLGPQTRSFSLIPNESDTYFRNIPILVVPNG---VQLVACGHSHTL 358
G G + + P E R +G V+LVACG HTL
Sbjct: 337 GYGRKVTTGH--PMEVPIGIRPPKNAAENSGCWFVKLVACGGRHTL 380
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 162/392 (41%), Gaps = 69/392 (17%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+ WG GQ G E + + A R + + G ++ A+ DG
Sbjct: 6 AVLAWGSGEDGQLGVGNMEDKDWVCS------IQALASHGKRVVSVVAGSRNSLAICEDG 59
Query: 82 TLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDGTI 139
LFTWG N+ G LG E + P +VK L++ + V++ G HC A ++ G
Sbjct: 60 QLFTWGWNQRGTLGHPPESKTESTPTQVKALENVKIVQAAIGGWHCLAV-----DDQG-- 112
Query: 140 STSRLWVWGQNQ-------------GSNFPR---LFWGAFTPNTIICQVSCGSVHVVALS 183
+ + WG N+ GS R P + QV+ G H V L+
Sbjct: 113 ---QAYAWGGNEYGQCGEEPERKEDGSKVLRRDIAIPQRCAPQLRVRQVAAGGTHSVVLT 169
Query: 184 ECGLLQAWGY----NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
G + WG + Q+ + +GL E + ++ G +H
Sbjct: 170 HNGHVWTWGQPWPPGDIKQISTPVRVQGL-------------------ENVQLIAVGAFH 210
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT 299
+ A+ E GEV+ WG GQLG Q + P V L G+ + D+A GG HS ALT
Sbjct: 211 NLALLEEGEVWAWGNNEYGQLGTGDTQPRSQ---PVPVQGLSGLILADIAAGGWHSTALT 267
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
+ +YAWG + G+LG G +S ++P + L+ + V+CG +H++
Sbjct: 268 TDAEVYAWGRGEHGRLGFG-DDKSSKMVPQKVH--------LLAGETIAQVSCGGTHSVA 318
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
DGRI +G +G+ + +P V
Sbjct: 319 RTADGRIFSYGRADHGRLGYGRKVTTGHPMEV 350
>gi|299116182|emb|CBN74531.1| similar to retinitis pigmentosa GTPase regulator [Ectocarpus
siliculosus]
Length = 983
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 144/330 (43%), Gaps = 52/330 (15%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS----EFVKSIS 120
+++ CG +HT A+ G + +WG FGQLG G +HP +++L E V ++
Sbjct: 97 IEVCCGRKHTVALMKGGFVMSWGTGYFGQLGHGDNASYRHPRLLRRLDPQRLGERVVQVA 156
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQNQ------GSN-----FPRLF-WGAFTPNTI 168
CG + +A + R++ WG N+ GS P L TP +
Sbjct: 157 CGGYHSAVATD---------AGRVFTWGFNRYGQCGNGSKDNTVPEPSLVDLSRVTPGAV 207
Query: 169 --ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPE 226
+ +V CG H ++ G L WG +G+LG + + I F + P
Sbjct: 208 GEVPKVLCGRHHSALVTRGGALYTWGACSFGKLG----LQDAEKTVCIPQEVTFFSDKP- 262
Query: 227 LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
+ Q + G++H A+S EV++WG G+ GQ GH SL +PRRV +L + +
Sbjct: 263 ---LVQAAAGDFHMVALSRKREVFSWGYGAEGQGGHGSLL---HMRMPRRVSSLQEVPVA 316
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGL-----------GPQTRSFSLIPNESDTYF 335
V CG S A+T G YAWG + G GL GP + T+
Sbjct: 317 QVVCGPWWSMAITVDGYCYAWGSADGGWTGLTRPPGLRVVDPGPSADRAVETQSFDSTHN 376
Query: 336 RNIPILV---VPNGVQLVACGHSHTLVYMR 362
++P LV P V V CG HTLV +
Sbjct: 377 VHVPALVYSLAPYKVLQVGCGGGHTLVVAK 406
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 119/260 (45%), Gaps = 27/260 (10%)
Query: 126 TAAIAEPRENDGTISTS--RLWVWGQNQGSNFPRLFWGAFTPNTIIC-QVSCGSVHVVAL 182
+ A A N + TS +L+ WG G P G T + C +V CG H VAL
Sbjct: 51 SPAFAAAGANHSILRTSEGKLFRWGVEDGDVHP-FPTGVCTQIPLPCIEVCCGRKHTVAL 109
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
+ G + +WG +GQLG G + PR+++ LD E++ QV+CG YHSA
Sbjct: 110 MKGGFVMSWGTGYFGQLGHGDNAS-YRHPRLLR----RLDPQRLGERVVQVACGGYHSAV 164
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF------IKDVACGGVHSC 296
++ G V+TWG GQ C S D + +V L + + V CG HS
Sbjct: 165 ATDAGRVFTWGFNRYGQ---CGNGSKDNTVPEPSLVDLSRVTPGAVGEVPKVLCGRHHSA 221
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
+T GALY WG G+LGL ++ IP E T+F + P++ A G H
Sbjct: 222 LVTRGGALYTWGACSFGKLGLQDAEKTV-CIPQEV-TFFSDKPLV-------QAAAGDFH 272
Query: 357 TLVYMRDGRIHGWGYNSYGQ 376
+ R + WGY + GQ
Sbjct: 273 MVALSRKREVFSWGYGAEGQ 292
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 79/191 (41%), Gaps = 24/191 (12%)
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
+ G HS + G+++ WG+ + GD P V + +V CG
Sbjct: 56 AAGANHSILRTSEGKLFRWGV-----------EDGDVHPFPTGVCTQIPLPCIEVCCGRK 104
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG 353
H+ AL G + +WG GQLG G S+ R + + V VACG
Sbjct: 105 HTVALMKGGFVMSWGTGYFGQLGHG-DNASY-----RHPRLLRRLDPQRLGERVVQVACG 158
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQAAN-EKSTYAWYPSPVDW------CVGEVRKLAAGGG 406
H+ V GR+ WG+N YGQ N K PS VD VGEV K+ G
Sbjct: 159 GYHSAVATDAGRVFTWGFNRYGQCGNGSKDNTVPEPSLVDLSRVTPGAVGEVPKVLCGRH 218
Query: 407 HSAVLADACSL 417
HSA++ +L
Sbjct: 219 HSALVTRGGAL 229
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 97/252 (38%), Gaps = 43/252 (17%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N GQ G ++ + P + +L GA + CG H+A V G
Sbjct: 171 VFTWGFNRYGQCGNGSKDNTVPEPSLV--DLSRVTPGAVGEVPKVLCGRHHSALVTRGGA 228
Query: 83 LFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
L+TWGA FG+LG E+ P++V + + + G A++ RE
Sbjct: 229 LYTWGACSFGKLGLQDAEKTVCIPQEVTFFSDKPLVQAAAGDFHMVALSRKRE------- 281
Query: 142 SRLWVWG---QNQGSN-------FPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
++ WG + QG + PR + + QV CG +A++ G AW
Sbjct: 282 --VFSWGYGAEGQGGHGSLLHMRMPRRV--SSLQEVPVAQVVCGPWWSMAITVDGYCYAW 337
Query: 192 GYNEYGQLG-----------------RGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G + G G R + + + A AP K+ QV
Sbjct: 338 GSADGGWTGLTRPPGLRVVDPGPSADRAVETQSFDSTHNVHVPALVYSLAP--YKVLQVG 395
Query: 235 CGEYHSAAVSEN 246
CG H+ V++
Sbjct: 396 CGGGHTLVVAKR 407
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG G+ G + E+ + IP+++ F ++ + A G H A++
Sbjct: 228 ALYTWGACSFGKLGLQDAEKTVCIPQEV--TFF-----SDKPLVQAAAGDFHMVALSRKR 280
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAI 129
+F+WG GQ G G+ + P +V LQ V + CG + AI
Sbjct: 281 EVFSWGYGAEGQGGHGSLLHMRMPRRVSSLQEVPVAQVVCGPWWSMAI 328
>gi|118084855|ref|XP_417055.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Gallus gallus]
Length = 566
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 116/233 (49%), Gaps = 24/233 (10%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HVV +E G + WG+N Y QLG G T GL +V +K+ +V+CG
Sbjct: 126 HVVLATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVN--------KKVIEVACGS 177
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHSC 296
+HS ++ +GEVYTWG + GQ+G S + +PRRV + L + ++ACG + S
Sbjct: 178 HHSMVLTSDGEVYTWGYNNSGQVGS---GSTANQPIPRRVTSCLQNKVVVNIACGQMCSM 234
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G +Y WG + GQLGLG + + R VQ VACG +H
Sbjct: 235 AVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR----------VQRVACGCAH 284
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
TLV +G+I+ WG NSYGQ + YP+ V V + R + HSA
Sbjct: 285 TLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTVT--VDKDRVVEIAACHSA 335
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 136/309 (44%), Gaps = 49/309 (15%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTAAIAEPRE 134
V + +F G N G LG G + P+++ L + + +S G+ H A E
Sbjct: 77 VTENDEVFVLGMNCSGCLGTGDIQSTIEPKRLDSLCGKKIACLSYGSGPHVVLATEE--- 133
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVS------------CGSVHVVAL 182
++ WG N + +L G + CQVS CGS H + L
Sbjct: 134 -------GEVYTWGHNA---YSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVL 183
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
+ G + WGYN GQ+G G T RV + + ++CG+ S A
Sbjct: 184 TSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQN--------KVVVNIACGQMCSMA 235
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
V ENGEVY WG GQLG L S + P R+ AL GI ++ VACG H+ LT +G
Sbjct: 236 VVENGEVYVWGYNGNGQLG---LGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEG 292
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYM 361
+YAWG + GQLG G N+S+ + + V++ AC +HT
Sbjct: 293 QIYAWGANSYGQLGTG----------NKSNQSYPTTVTVDKDRVVEIAACHSAHTSAAKT 342
Query: 362 RDGRIHGWG 370
+ G+++ WG
Sbjct: 343 QSGQVYMWG 351
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 112/241 (46%), Gaps = 35/241 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG+N Q G G +P Q+ L N + +++ACG H+ + SDG
Sbjct: 136 VYTWGHNAYSQLG-NGTTNHGLVPCQVSTNL------VNKKVIEVACGSHHSMVLTSDGE 188
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
++TWG N GQ+G G+ + P +V LQ++ V +I+CG C+ A+ E E
Sbjct: 189 VYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGE------- 241
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N N P A + +V+CG H + L++ G + AWG
Sbjct: 242 --VYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGA 299
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH-SAAVSENGEVYTW 252
N YGQLG G V + ++ A +C H SAA +++G+VY W
Sbjct: 300 NSYGQLGTGNKSNQSYPTTVTVDKDRVVEIA---------ACHSAHTSAAKTQSGQVYMW 350
Query: 253 G 253
G
Sbjct: 351 G 351
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 138/334 (41%), Gaps = 46/334 (13%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G V + ++V G N SG G I + P+ G L
Sbjct: 66 VFGSAGNEVLYVTENDEVFVLGMNCSGCLGTGD------IQSTIEPKRLDSLCGKKIACL 119
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAH 124
G H +G ++TWG N + QLG+GT P +V L ++ V ++CG+H
Sbjct: 120 SYGSG-PHVVLATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSH 178
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSN----------FPRLFWGAFTPNTIICQVSC 174
+ + +DG + T WG N PR N ++ ++C
Sbjct: 179 HSMVLT----SDGEVYT-----WGYNNSGQVGSGSTANQPIPRRVTSCLQ-NKVVVNIAC 228
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G + +A+ E G + WGYN GQLG G + R+ A + ++ +V+
Sbjct: 229 GQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRI---------AALQGIRVQRVA 279
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG 292
CG H+ +++ G++Y WG S GQLG +G+K + P V ++ AC
Sbjct: 280 CGCAHTLVLTDEGQIYAWGANSYGQLG-----TGNKSNQSYPTTVTVDKDRVVEIAACHS 334
Query: 293 VH-SCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
H S A T G +Y WG + GQ + P F+
Sbjct: 335 AHTSAAKTQSGQVYMWGQCR-GQSVVLPHLTHFA 367
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 69/151 (45%), Gaps = 20/151 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G Q P A R +ACG HT + +G
Sbjct: 242 VYVWGYNGNGQLGLGSSGNQ--------PTPCRIAALQGIRVQRVACGCAHTLVLTDEGQ 293
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
++ WGAN +GQLG G + + +P V + V+ +C AH +AA + +
Sbjct: 294 IYAWGANSYGQLGTGNKSNQSYPTTVTVDKDRVVEIAACHSAHTSAAKTQ---------S 344
Query: 142 SRLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
++++WGQ +G + P L A T + C
Sbjct: 345 GQVYMWGQCRGQSVVLPHLTHFACTDDVFAC 375
>gi|344284964|ref|XP_003414234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Loxodonta
africana]
Length = 1018
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 123/243 (50%), Gaps = 25/243 (10%)
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
+SCG H +A+ G + AWG GQLG G E P +K A KI
Sbjct: 78 LSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKELNFTPMKVKALAGI--------KII 129
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL----PRRVVALDGIFIKD 287
QVSCG YHS A+S++G+V++WG S GQLG KE L P+RV +L+GI +
Sbjct: 130 QVSCGHYHSLALSQDGQVFSWGNNSHGQLGL------GKEFLSQESPQRVKSLEGIPLAQ 183
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
VA GG HS AL+ G + WG + AGQL L +P +S R+I L GV
Sbjct: 184 VAAGGAHSFALSLSGTSFGWGSNNAGQLALSGNN-----VPVQSYKP-RSIGALK-ELGV 236
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGH 407
++CG HT V +DG++ +G NS GQ + + P V+ G V ++ G H
Sbjct: 237 VYISCGSEHTAVLTQDGKVFTFGDNSSGQLGHGPTAEKRGPQLVEGIDGLVSQIDCGSYH 296
Query: 408 SAV 410
+ V
Sbjct: 297 TLV 299
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 143/312 (45%), Gaps = 47/312 (15%)
Query: 68 ACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTA 127
A G H+ + SDGT+ G N GQLG RK P ++ L++ V +SCG +
Sbjct: 27 ASGERHSLLLLSDGTVHACGDNSCGQLGRRGVPHRKRPGLIQALETLNVDLLSCGKEHSL 86
Query: 128 AIAEPRENDGTISTSRLWVWGQ-NQGS----NFPRLFWGAFTPNTI-------ICQVSCG 175
A+ R++ WG ++G F L FTP + I QVSCG
Sbjct: 87 AVCH---------KGRVFAWGAGSEGQLGIGEFKEL---NFTPMKVKALAGIKIIQVSCG 134
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
H +ALS+ G + +WG N +GQLG G + P+ +K L+ P + QV+
Sbjct: 135 HYHSLALSQDGQVFSWGNNSHGQLGLGKEFLSQESPQRVKS----LEGIP----LAQVAA 186
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
G HS A+S +G + WG + GQL + PR + AL + + ++CG H+
Sbjct: 187 GGAHSFALSLSGTSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELGVVYISCGSEHT 246
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLVACG 353
LT G ++ +G + +GQLG GP T + P LV + V + CG
Sbjct: 247 AVLTQDGKVFTFGDNSSGQLGHGP-------------TAEKRGPQLVEGIDGLVSQIDCG 293
Query: 354 HSHTLVYMRDGR 365
HTLVY+ R
Sbjct: 294 SYHTLVYVYTTR 305
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 144/328 (43%), Gaps = 59/328 (17%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++ G N GQ GR+G +P + P L N L +CG EH+ AV G
Sbjct: 41 TVHACGDNSCGQLGRRG------VPHRKRPGLIQALETLNVDLL--SCGKEHSLAVCHKG 92
Query: 82 TLFTWGANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+F WGA GQLG G +E P KVK L + +SCG + + A+++ DG +
Sbjct: 93 RVFAWGAGSEGQLGIGEFKELNFTPMKVKALAGIKIIQVSCGHYHSLALSQ----DGQV- 147
Query: 141 TSRLWVWGQNQGSN--FPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+ WG N + F +P + + QV+ G H ALS G W
Sbjct: 148 ----FSWGNNSHGQLGLGKEFLSQESPQRVKSLEGIPLAQVAAGGAHSFALSLSGTSFGW 203
Query: 192 GYNEYGQL---GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
G N GQL G + + + PR I + + +SCG H+A ++++G+
Sbjct: 204 GSNNAGQLALSGNNVPVQSYK-PRSIGALKEL--------GVVYISCGSEHTAVLTQDGK 254
Query: 249 VYTWGLGSVGQLGH--CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
V+T+G S GQLGH + + G P+ V +DG+ + + CG H+ +Y
Sbjct: 255 VFTFGDNSSGQLGHGPTAEKRG-----PQLVEGIDGL-VSQIDCGSYHTL-------VYV 301
Query: 307 WGGSQAGQLGLGP-----QTRSFSLIPN 329
+ Q G GP TRS +L N
Sbjct: 302 YTTRQVISFGRGPSDTTSSTRSDALTKN 329
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 118/253 (46%), Gaps = 38/253 (15%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGR-GITCEGLQGPRVIKGYAKFLDEAPELEK 229
Q + G H + L G + A G N GQLGR G+ G L +A E
Sbjct: 25 QAASGERHSLLLLSDGTVHACGDNSCGQLGRRGVPHRKRPG----------LIQALETLN 74
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ +SCG+ HS AV G V+ WG GS GQLG + + P +V AL GI I V+
Sbjct: 75 VDLLSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFK--ELNFTPMKVKALAGIKIIQVS 132
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
CG HS AL+ G +++WG + GQLGLG + + ES +++ G+ L
Sbjct: 133 CGHYHSLALSQDGQVFSWGNNSHGQLGLGKE-----FLSQESPQRVKSL------EGIPL 181
Query: 350 --VACGHSHTLVYMRDGRIHGWGYNSYGQAA---NEKSTYAWYPSPVDWCVGEVRKL--- 401
VA G +H+ G GWG N+ GQ A N ++ P +G +++L
Sbjct: 182 AQVAAGGAHSFALSLSGTSFGWGSNNAGQLALSGNNVPVQSYKPR----SIGALKELGVV 237
Query: 402 --AAGGGHSAVLA 412
+ G H+AVL
Sbjct: 238 YISCGSEHTAVLT 250
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 117/252 (46%), Gaps = 45/252 (17%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG GQ G G ++L A A + + ++CGH H+ A++
Sbjct: 91 KGRVFAWGAGSEGQLG-IGEFKELNFTP------MKVKALAGIKIIQVSCGHYHSLALSQ 143
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG +F+WG N GQLG G E ++ P++VK L+ + ++ G + A++ + G
Sbjct: 144 DGQVFSWGNNSHGQLGLGKEFLSQESPQRVKSLEGIPLAQVAAGGAHSFALSLSGTSFG- 202
Query: 139 ISTSRLWVWGQNQ-------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSE 184
WG N G+N P ++ P +I + +SCGS H L++
Sbjct: 203 --------WGSNNAGQLALSGNNVP---VQSYKPRSIGALKELGVVYISCGSEHTAVLTQ 251
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-V 243
G + +G N GQLG G T E +GP++++G ++Q+ CG YH+ V
Sbjct: 252 DGKVFTFGDNSSGQLGHGPTAEK-RGPQLVEGIDGL---------VSQIDCGSYHTLVYV 301
Query: 244 SENGEVYTWGLG 255
+V ++G G
Sbjct: 302 YTTRQVISFGRG 313
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 94/186 (50%), Gaps = 14/186 (7%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
++ Q + GE HS + +G V+ G S GQLG + + P + AL+ + + +
Sbjct: 22 ELRQAASGERHSLLLLSDGTVHACGDNSCGQLGRRGVPHRKR---PGLIQALETLNVDLL 78
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
+CG HS A+ KG ++AWG GQLG+G + + + P + + L +Q
Sbjct: 79 SCGKEHSLAVCHKGRVFAWGAGSEGQLGIG-EFKELNFTPMK-------VKALAGIKIIQ 130
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGG 406
V+CGH H+L +DG++ WG NS+GQ K + P V G + ++AAGG
Sbjct: 131 -VSCGHYHSLALSQDGQVFSWGNNSHGQLGLGKEFLSQESPQRVKSLEGIPLAQVAAGGA 189
Query: 407 HSAVLA 412
HS L+
Sbjct: 190 HSFALS 195
>gi|390348536|ref|XP_781445.2| PREDICTED: secretion-regulating guanine nucleotide exchange
factor-like [Strongylocentrotus purpuratus]
Length = 539
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 122/413 (29%), Positives = 172/413 (41%), Gaps = 56/413 (13%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A WG N GQ G ++ L LP L P + I G HT + +G
Sbjct: 150 AYLAWGANSYGQLGLGHQKDHL-----LPENLKTFPEDVKT----IVGGGGHTVFLTGNG 200
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
L G+N GQLG G +V L+ +K I+CG + T AI E E
Sbjct: 201 DLHVCGSNNKGQLGLGHTSDINKLVRVPDLRP--LKKIACGWNHTVAITENDE------- 251
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPNTI---------ICQVSCGSVHVVALSECGLLQAWG 192
L WG N P I +S G H +A+S G L WG
Sbjct: 252 --LLCWGSNTHGQLTHKESIVTKPRQIELSGVDCPRFAAISGGLRHTLAVSTDGQLWTWG 309
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE-KITQVSCGEYHSAAVSENGEVYT 251
+ GQLG T ++ P + +++ K QV+ G YHSAA+S+ G +Y
Sbjct: 310 AGKKGQLGW--TDSKMRVPHQWNKPVHIPVKEDDVDVKFVQVAAGAYHSAALSDMGILYI 367
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRV--VALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
WG QL +S + P+R+ DG+ IK + G H A+T ++Y WG
Sbjct: 368 WGCNKWSQLAQP--KSSNPISTPKRLDPALFDGLTIKGIHSGWTHMLAITEDESVYTWGR 425
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRN------------IP--ILVVPNGVQLVACGHS 355
+ GQLG P +S IPN S N +P I ++ N Q+V CG
Sbjct: 426 NDYGQLGR-PAAKS---IPNGSAESESNATPTTTTPDCCHVPTEISILKNAKQIV-CGAE 480
Query: 356 HTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEV-RKLAAGGGH 407
H+L +D ++ WG+N +G A+ T + P V G+V K+ G GH
Sbjct: 481 HSLAITKDDKLLAWGWNEHGMCADGTKTNVFLPKQVQGLDGQVASKVGVGAGH 533
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 130/312 (41%), Gaps = 50/312 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I + WG N GQ K E + P+Q+ CP R+ I+ G HT A
Sbjct: 246 ITENDELLCWGSNTHGQLTHK--ESIVTKPRQIELSGVDCP-----RFAAISGGLRHTLA 298
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGR---------KHPEKVKQLQSEFVKSISCGAHCTA 127
V++DG L+TWGA + GQLG + R P K + +FV+ ++ GA+ +A
Sbjct: 299 VSTDGQLWTWGAGKKGQLGWTDSKMRVPHQWNKPVHIPVKEDDVDVKFVQ-VAAGAYHSA 357
Query: 128 AIAEPRENDGTISTSRLWVWGQNQGSNF-----------PRLFWGAFTPNTIICQVSCGS 176
A+++ L++WG N+ S P+ A I + G
Sbjct: 358 ALSD---------MGILYIWGCNKWSQLAQPKSSNPISTPKRLDPALFDGLTIKGIHSGW 408
Query: 177 VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFL----------DEAPE 226
H++A++E + WG N+YGQLGR G + A E
Sbjct: 409 THMLAITEDESVYTWGRNDYGQLGRPAAKSIPNGSAESESNATPTTTTPDCCHVPTEISI 468
Query: 227 LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
L+ Q+ CG HS A++++ ++ WG + G C+ + LP++V LDG
Sbjct: 469 LKNAKQIVCGAEHSLAITKDDKLLAWGWN---EHGMCADGTKTNVFLPKQVQGLDGQVAS 525
Query: 287 DVACGGVHSCAL 298
V G H A
Sbjct: 526 KVGVGAGHCFAF 537
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 167/403 (41%), Gaps = 64/403 (15%)
Query: 2 DINEIIGETARPVDNIPAKSAIYVWGYNHSGQTG---RKGRERQLRIPKQLPPELFGCPA 58
D+ I+G V + ++V G N+ GQ G + +R+P P +
Sbjct: 23 DVKTIVGGGGHTV-FLTGNGDLHVCGSNNKGQLGLGHTSDINKLVRVPDLRPLK------ 75
Query: 59 GANSRWLDIACGHEHTAAVA-SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVK 117
I CG HT A+ +DG+L +F ++G E PE +
Sbjct: 76 -------QIVCGWNHTVAITGTDGSLELLHRGQFNEVG---RELIPVPECSWEETLPVAV 125
Query: 118 SISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGA----FTPNTI----- 168
+ G+H + + +G + WG N ++ +L G P +
Sbjct: 126 RVGAGSH-ESCVGVADVLNGVYTLFAYLAWGAN---SYGQLGLGHQKDHLLPENLKTFPE 181
Query: 169 -ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL 227
+ + G H V L+ G L G N GQLG G T + + RV P+L
Sbjct: 182 DVKTIVGGGGHTVFLTGNGDLHVCGSNNKGQLGLGHTSDINKLVRV-----------PDL 230
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+ +++CG H+ A++EN E+ WG + GQL H + + R + L G+
Sbjct: 231 RPLKKIACGWNHTVAITENDELLCWGSNTHGQLTH-----KESIVTKPRQIELSGVDCPR 285
Query: 288 VAC--GGV-HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP 344
A GG+ H+ A+++ G L+ WG + GQLG T S +P++ + + + I V
Sbjct: 286 FAAISGGLRHTLAVSTDGQLWTWGAGKKGQLGW---TDSKMRVPHQ---WNKPVHIPVKE 339
Query: 345 NGVQL----VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKST 383
+ V + VA G H+ G ++ WG N + Q A KS+
Sbjct: 340 DDVDVKFVQVAAGAYHSAALSDMGILYIWGCNKWSQLAQPKSS 382
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 91/229 (39%), Gaps = 18/229 (7%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
E + + G H+ ++ NG+++ G + GQLG G + + V D +K
Sbjct: 22 EDVKTIVGGGGHTVFLTGNGDLHVCGSNNKGQLG-----LGHTSDINKLVRVPDLRPLKQ 76
Query: 288 VACGGVHSCALT-SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPN 345
+ CG H+ A+T + G+L Q ++G LIP ++ +P+ V V
Sbjct: 77 IVCGWNHTVAITGTDGSLELLHRGQFNEVGR-------ELIPVPECSWEETLPVAVRVGA 129
Query: 346 GVQLVACGHSHTL--VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 403
G G + L VY + WG NSYGQ P + +V+ +
Sbjct: 130 GSHESCVGVADVLNGVYTLFAYL-AWGANSYGQLGLGHQKDHLLPENLKTFPEDVKTIVG 188
Query: 404 GGGHSAVLADACSLKELCEFRLAESVTLSNASEIEDVASRTGSEALARL 452
GGGH+ L L +C + L + S+I + L ++
Sbjct: 189 GGGHTVFLTGNGDL-HVCGSNNKGQLGLGHTSDINKLVRVPDLRPLKKI 236
>gi|348583539|ref|XP_003477530.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Cavia
porcellus]
Length = 551
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 120/245 (48%), Gaps = 23/245 (9%)
Query: 148 GQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEG 207
G Q + PR + + I C H+V + G + +WG+N YGQLG G G
Sbjct: 81 GDVQSTLEPRRL-DSLSDKKIACLSYGSGPHIVLATTEGEVFSWGHNAYGQLGNGTINHG 139
Query: 208 LQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQS 267
L + + +++T+V+CG YHS ++ +GEV+ WG + GQ+G S +
Sbjct: 140 LVPSHISTNLSN--------KQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTAN 191
Query: 268 GDKELLPRRVVA-LDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSL 326
+ +PRRV L + ++ACG + S A+ G +Y WG + GQLGLG +
Sbjct: 192 ---QAIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTP 248
Query: 327 IPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAW 386
+ R VQ VACG++HTLV +G+++ WG NSYGQ +
Sbjct: 249 CRVAALQGIR----------VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQS 298
Query: 387 YPSPV 391
YP+PV
Sbjct: 299 YPTPV 303
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 136/303 (44%), Gaps = 49/303 (16%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTAAIAEPRENDGTIS 140
+F G N G LG G + P ++ L + + +S G+ H A E
Sbjct: 67 IFVLGTNCSGCLGLGDVQSTLEPRRLDSLSDKKIACLSYGSGPHIVLATTE--------- 117
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFT------------PNTIICQVSCGSVHVVALSECGLL 188
++ WG N + +L G N + +V+CGS H + L+ G +
Sbjct: 118 -GEVFSWGHNA---YGQLGNGTINHGLVPSHISTNLSNKQVTEVACGSYHSLVLTSDGEV 173
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
AWGYN GQ+G G T PR + G + + + ++CG+ S AV + GE
Sbjct: 174 FAWGYNNSGQVGSGSTANQAI-PRRVTG-------CLQNKVVVNIACGQMCSMAVVDTGE 225
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
VY WG GQLG L S + P RV AL GI ++ VACG H+ LT +G +YAWG
Sbjct: 226 VYVWGYNGNGQLG---LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRIH 367
+ GQLG G N+S+ + ++ +++ AC +HT + G ++
Sbjct: 283 ANSYGQLGTG----------NKSNQSYPTPVVVEKDRIIEIAACHSTHTSAAKTQGGHVY 332
Query: 368 GWG 370
WG
Sbjct: 333 MWG 335
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 115/243 (47%), Gaps = 39/243 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N GQ G G +P + L +N + ++ACG H+ + SDG
Sbjct: 120 VFSWGHNAYGQLG-NGTINHGLVPSHISTNL------SNKQVTEVACGSYHSLVLTSDGE 172
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P +V LQ++ V +I+CG C+ A+ + T
Sbjct: 173 VFAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSMAV---------VDT 223
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N N P A + +V+CG H + L++ G + AWG
Sbjct: 224 GEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 283
Query: 194 NEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G + + P V+ E ++I ++ +C H SAA ++ G VY
Sbjct: 284 NSYGQLGTGNKSNQSYPTPVVV-----------EKDRIIEIAACHSTHTSAAKTQGGHVY 332
Query: 251 TWG 253
WG
Sbjct: 333 MWG 335
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 79/175 (45%), Gaps = 21/175 (12%)
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHSCALTSK 301
N E++ G G LG +QS L PRR LD + K +AC G H T++
Sbjct: 64 NDEIFVLGTNCSGCLGLGDVQS---TLEPRR---LDSLSDKKIACLSYGSGPHIVLATTE 117
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
G +++WG + GQLG G T + L+P+ T N V VACG H+LV
Sbjct: 118 GEVFSWGHNAYGQLGNG--TINHGLVPSHISTNLSN-------KQVTEVACGSYHSLVLT 168
Query: 362 RDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE--VRKLAAGGGHSAVLADA 414
DG + WGYN+ GQ + + P V C+ V +A G S + D
Sbjct: 169 SDGEVFAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSMAVVDT 223
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 18/150 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G Q P A R +ACG+ HT + +G
Sbjct: 226 VYVWGYNGNGQLGLGSSGNQ--------PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 277
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WGAN +GQLG G + + +P V + ++ +C + T+A
Sbjct: 278 VYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSTHTSA--------AKTQGG 329
Query: 143 RLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 330 HVYMWGQCRGQSVTLPHLTHFSCTDDVFAC 359
>gi|15218867|ref|NP_176767.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
finger domain [Arabidopsis thaliana]
gi|6227017|gb|AAF06053.1|AC009513_9 Contains PF|00169 Pleckstrin homology domain, 6 PF|00415 Regulator
of chromosome condensation (RCC1) domains and a PF|01363
FYVE Zinc finger domain [Arabidopsis thaliana]
gi|332196320|gb|AEE34441.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
finger domain [Arabidopsis thaliana]
Length = 1006
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 145/330 (43%), Gaps = 52/330 (15%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
I+ G +H A V G +F WG G+LG HP++V+ L+ V+S++C H T
Sbjct: 297 ISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNIDIDHPKRVESLEDVAVRSVACSDHQT 356
Query: 127 AAIAEPRENDGTISTSRLWVWG------QNQGSNF-PRLFWGAFTPNTIICQVSCGSVHV 179
A+ E E L++WG + GS F R + + V+CG+ H
Sbjct: 357 CAVTESGE---------LYLWGIDGGTIEQSGSQFLTRKISDVLGGSLTVLSVACGAWHT 407
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
++ G L +G +G LG G + E + P+ ++ + K+ VSCG +H
Sbjct: 408 AIVTSSGQLFTYGSGTFGVLGHG-SLESVTKPKEVESLRRM--------KVISVSCGPWH 458
Query: 240 SAAVSEN------------GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL-DGIFIK 286
+AA+ E G+++TWG G G+LGH ++L+P V L D FIK
Sbjct: 459 TAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHA---DSKRKLVPTCVTELIDHDFIK 515
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
V+CG + AL+ G +Y G S GQLG P D + +
Sbjct: 516 -VSCGWTLTVALSISGTVYTMGSSIHGQLG----------CPRAKDKSVNVVLGNLTRQF 564
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
V+ +A G H V G ++ WG GQ
Sbjct: 565 VKDIASGSHHVAVLTSFGNVYTWGKGMNGQ 594
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 113/238 (47%), Gaps = 23/238 (9%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
L +ACG HTA V S G LFT+G+ FG LG G+ E P++V+ L+ V S+SCG
Sbjct: 398 LSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPW 457
Query: 125 CTAAIAEP---RENDGTISTSRLWVWGQ-NQG----SNFPRLFWGAFTPNTI---ICQVS 173
TAAI E R+ S +L+ WG ++G ++ R I +VS
Sbjct: 458 HTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDFIKVS 517
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
CG VALS G + G + +GQLG C PR + + + +
Sbjct: 518 CGWTLTVALSISGTVYTMGSSIHGQLG----C-----PRAKDKSVNVVLGNLTRQFVKDI 568
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
+ G +H A ++ G VYTWG G GQLG ++ + +L V L ++ +ACG
Sbjct: 569 ASGSHHVAVLTSFGNVYTWGKGMNGQLGLGDVRDRNSPVL---VEPLGDRLVESIACG 623
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 74/157 (47%), Gaps = 18/157 (11%)
Query: 221 LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL 280
L E+ + + +S G H+A V+ GEV+ WG G+ G+LG L+ P+RV +L
Sbjct: 285 LLESATMFDVQSISLGAKHAALVTRQGEVFCWGNGNSGKLG---LKVNIDIDHPKRVESL 341
Query: 281 DGIFIKDVACGGVHSCALTSKGALYAWG--GSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
+ + ++ VAC +CA+T G LY WG G Q G TR S + S T
Sbjct: 342 EDVAVRSVACSDHQTCAVTESGELYLWGIDGGTIEQSGSQFLTRKISDVLGGSLTVLS-- 399
Query: 339 PILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
VACG HT + G++ +G ++G
Sbjct: 400 -----------VACGAWHTAIVTSSGQLFTYGSGTFG 425
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
DIA G H A + S G ++TWG GQLG G R P V+ L V+SI+CG +
Sbjct: 567 DIASGSHHVAVLTSFGNVYTWGKGMNGQLGLGDVRDRNSPVLVEPLGDRLVESIACGLNL 626
Query: 126 TAAIAEPRE---NDGTISTS 142
TAAI +E ND T +S
Sbjct: 627 TAAICLHKEISLNDQTACSS 646
>gi|260814706|ref|XP_002602055.1| hypothetical protein BRAFLDRAFT_228262 [Branchiostoma floridae]
gi|229287360|gb|EEN58067.1| hypothetical protein BRAFLDRAFT_228262 [Branchiostoma floridae]
Length = 833
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 171/366 (46%), Gaps = 55/366 (15%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFV--KSISCG 122
+D + E+ V + ++ WG+N QL +G++E P +L F ++I G
Sbjct: 361 IDDSSTGENGNMVTENSEVYVWGSNSSHQLAEGSQEKILQP----KLSPAFANAQTIEAG 416
Query: 123 AHCTAAIAEPRENDGTI------STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGS 176
+CT + +DGT+ S RL + N + +L F +I ++S
Sbjct: 417 QYCTFVVY----SDGTVRACGKGSYGRLGLGDSNNQTTLKKL---NFDHRYVIRKISSSK 469
Query: 177 V---HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
H +AL+ G + +WG +YG+LG G + + Y K + A + + + +
Sbjct: 470 GSDGHTLALTADGEVFSWGDGDYGKLGHGNSS--------TQKYPKQIQGALQGKVVKSI 521
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHC----SLQSGDKELL--PRRVVALDGIFIKD 287
S G HSAAV+E+GE++TWG G G+LGH L GD + P+ + AL G++I+
Sbjct: 522 SAGYRHSAAVTEDGELFTWGEGDYGRLGHGDSNRKLGHGDTNRVYKPKVIEALVGLYIRK 581
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLG-PQTRSF--SLIPNESDTYFRNIPILVVP 344
V CG S ALTS G L+AWG LG G P++ + L+ ++T +
Sbjct: 582 VCCGSQSSLALTSTGQLFAWGCGAC--LGCGSPESTALRPKLVEELANTRIVD------- 632
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKS-TYAWYPSPVDWCVG-EVRKLA 402
VACG SH L D ++ WG N+ GQ S + P V G V +++
Sbjct: 633 -----VACGDSHCLALTHDNEVYAWGNNAMGQCGQGHSQSPITKPKKVVGLDGVTVHQIS 687
Query: 403 AGGGHS 408
AG HS
Sbjct: 688 AGTSHS 693
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 120/246 (48%), Gaps = 39/246 (15%)
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAHCTAAIAE 131
HT A+ +DG +F+WG ++G+LG G +K+P++++ LQ + VKSIS G +AA+ E
Sbjct: 474 HTLALTADGEVFSWGDGDYGKLGHGNSSTQKYPKQIQGALQGKVVKSISAGYRHSAAVTE 533
Query: 132 PRENDGTISTSRLWVWGQN------QGSNFPRLFWG----AFTPNTI-------ICQVSC 174
E L+ WG+ G + +L G + P I I +V C
Sbjct: 534 DGE---------LFTWGEGDYGRLGHGDSNRKLGHGDTNRVYKPKVIEALVGLYIRKVCC 584
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
GS +AL+ G L AWG C G P K ++E +I V+
Sbjct: 585 GSQSSLALTSTGQLFAWGCG---------ACLGCGSPESTALRPKLVEELAN-TRIVDVA 634
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVH 294
CG+ H A++ + EVY WG ++GQ G QS + P++VV LDG+ + ++ G H
Sbjct: 635 CGDSHCLALTHDNEVYAWGNNAMGQCGQGHSQSPITK--PKKVVGLDGVTVHQISAGTSH 692
Query: 295 SCALTS 300
S A T+
Sbjct: 693 SLAWTA 698
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDG-TEEGRKHPEKVKQLQSEFVKS 118
AN+R +D+ACG H A+ D ++ WG N GQ G G ++ P+KV L V
Sbjct: 626 ANTRIVDVACGDSHCLALTHDNEVYAWGNNAMGQCGQGHSQSPITKPKKVVGLDGVTVHQ 685
Query: 119 ISCG-AHCTAAIAEPRE 134
IS G +H A A P +
Sbjct: 686 ISAGTSHSLAWTALPTD 702
>gi|225464728|ref|XP_002264236.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Vitis
vinifera]
Length = 489
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 107/354 (30%), Positives = 162/354 (45%), Gaps = 56/354 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+++WG G+ G G+E +P L P L A G H+ A++S G
Sbjct: 111 LWIWGKGDGGRLGF-GQEYPAFLPT-LNPNL--------DSIRSTALGGVHSVALSSLGQ 160
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+FTWG FG LG P V+ + ++ I+ TAAI E E
Sbjct: 161 VFTWGYGGFGALGHSVYHRELLPRMVEGSWNAKIRHIATAGTHTAAITESGE-------- 212
Query: 143 RLWVWGQNQGSNF--------PRLFWGAFTPNTI------ICQVSCGSVHVVALSECGLL 188
L+ WG++QG P G P+ + + VSCG + L++ G L
Sbjct: 213 -LYTWGRDQGDGRLGLGPNCGPNEGGGLSIPSKVKALPVPVAAVSCGGFFTMVLTQEGQL 271
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE--KITQVSCGEYHSAAVSEN 246
WG N +LGRG G + P+ I P L+ +I Q++ G YHS A++++
Sbjct: 272 WNWGANSNYELGRGDKVGGWK-PQPI----------PSLQDVRIIQIASGGYHSLALTDD 320
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
G+V +WG G GQLGH S+++ + +P + AL + +ACGG S A+T G LY
Sbjct: 321 GKVLSWGYGQHGQLGHSSIEN---QKIPTVIEALADEHVIYIACGGSSSAAITDNGKLYM 377
Query: 307 WGGSQAGQLGLG--PQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 358
WG ++ QLG+ P+T+ P + F + P+ V VA G SH +
Sbjct: 378 WGNAKDSQLGVPGLPETQ-----PLPVEVKFLMEDDRLGPHNVLSVAVGASHAM 426
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 151/356 (42%), Gaps = 46/356 (12%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQ--SEFVKSISCGAHCTAAIAEPRE------ 134
L +WG GQLG G EE R +P V L F G C ++
Sbjct: 37 LLSWGRGASGQLGGGIEEMRLYPSPVATLHLPPSFNLCPIPGRLCLPSVENASGLTEVGI 96
Query: 135 -----NDGTISTSRLWVWGQNQG------SNFPRLFWGAFTPNT-IICQVSCGSVHVVAL 182
+ + +LW+WG+ G +P F PN I + G VH VAL
Sbjct: 97 SCGLFHSSLVVDGKLWIWGKGDGGRLGFGQEYPA-FLPTLNPNLDSIRSTALGGVHSVAL 155
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
S G + WGY +G LG + L PR+++G KI ++ H+AA
Sbjct: 156 SSLGQVFTWGYGGFGALGHSVYHRELL-PRMVEGSWN--------AKIRHIATAGTHTAA 206
Query: 243 VSENGEVYTWGL----GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
++E+GE+YTWG G +G +C G +P +V AL + + V+CGG + L
Sbjct: 207 ITESGELYTWGRDQGDGRLGLGPNCGPNEGGGLSIPSKVKALP-VPVAAVSCGGFFTMVL 265
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 358
T +G L+ WG + +LG G + + P S R I I A G H+L
Sbjct: 266 TQEGQLWNWGANSNYELGRGDKVGGWKPQPIPSLQDVRIIQI----------ASGGYHSL 315
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLAD 413
DG++ WGY +GQ + P+ ++ E V +A GG SA + D
Sbjct: 316 ALTDDGKVLSWGYGQHGQLGHSSIENQKIPTVIEALADEHVIYIACGGSSSAAITD 371
>gi|410906431|ref|XP_003966695.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Takifugu rubripes]
Length = 726
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 124/408 (30%), Positives = 184/408 (45%), Gaps = 58/408 (14%)
Query: 15 DNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHT 74
D IP A++ +G + + +P + + N L IACG EHT
Sbjct: 7 DEIPETGAVFTFGKS--------------KFADNIPSKFWL----KNDVPLKIACGDEHT 48
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPR 133
A + +G LF +G+N +GQLG G++ P VK L++E V ++CG H A+ +
Sbjct: 49 ALITKNGRLFMFGSNNWGQLGLGSKRTVNKPTCVKALKTEKVLLVACGRNHTLICTAQGK 108
Query: 134 E-NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
+ G S +L + + + F R+ AF + ++ GS AL+E G L WG
Sbjct: 109 VFSSGGNSEGQLGLGDCEERTTFQRIH--AFDSLGPVKMLAAGSNTSAALTESGKLFMWG 166
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
N GQ+G + +A E I+ VSCG YHSA V+ +G +YT+
Sbjct: 167 DNTEGQIG-----------LAKESHAPSPQEVDVGGPISWVSCGYYHSAFVTADGALYTF 215
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD----VACGGVHSCALTSKGALYAWG 308
G G+LG + E LPR V IK+ VACGG H+ ALT + L+ +G
Sbjct: 216 GECDSGKLGLTT------EQLPRHRVPQMVKSIKEPVTQVACGGGHTVALTEE-RLFTFG 268
Query: 309 GSQAGQLGLGPQTRSF-SLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
Q GQLG G T F S +P + + + V VACG +HT V G ++
Sbjct: 269 LGQFGQLGHG--TFIFESRLPRPVEHFKKGR--------VCQVACGENHTAVITDGGLLY 318
Query: 368 GWGYNSYGQ--AANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
+G +G+ E T + P+ + V+ GG H VLA
Sbjct: 319 TFGDGRHGKLGLGEENFTNQFKPTVCSRFLKYGVQAATCGGCHMVVLA 366
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 164/356 (46%), Gaps = 49/356 (13%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I ++++G N+ GQ G G +R + P + A + L +ACG HT
Sbjct: 51 ITKNGRLFMFGSNNWGQLGL-GSKRTVNKPTCVK-------ALKTEKVLLVACGRNHTLI 102
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSE-FVKSISCGAHCTAAIAEPREN 135
+ G +F+ G N GQLG G E R +++ S VK ++ G++ +AA+ E
Sbjct: 103 CTAQGKVFSSGGNSEGQLGLGDCEERTTFQRIHAFDSLGPVKMLAAGSNTSAALTE---- 158
Query: 136 DGTISTSRLWVWGQN-QGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECGLLQ 189
+ +L++WG N +G A +P + I VSCG H ++ G L
Sbjct: 159 -----SGKLFMWGDNTEGQIGLAKESHAPSPQEVDVGGPISWVSCGYYHSAFVTADGALY 213
Query: 190 AWGYNEYGQLGRGITCEGL---QGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+G + G+LG +T E L + P+++K E +TQV+CG H+ A++E
Sbjct: 214 TFGECDSGKLG--LTTEQLPRHRVPQMVKSIK---------EPVTQVACGGGHTVALTEE 262
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
++T+GLG GQLGH + + LPR V + VACG H+ +T G LY
Sbjct: 263 -RLFTFGLGQFGQLGHGTFIFESR--LPRPVEHFKKGRVCQVACGENHTAVITDGGLLYT 319
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
+G + G+LGLG + + P + + GVQ CG H +V R
Sbjct: 320 FGDGRHGKLGLGEENFTNQFKPTVCSRFLKY--------GVQAATCGGCHMVVLAR 367
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 131/282 (46%), Gaps = 31/282 (10%)
Query: 136 DGTISTSRLWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
D T ++ +G+++ N P FW N + +++CG H +++ G L +G N
Sbjct: 7 DEIPETGAVFTFGKSKFADNIPSKFW---LKNDVPLKIACGDEHTALITKNGRLFMFGSN 63
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+GQLG G + + P +K A + EK+ V+CG H+ + G+V++ G
Sbjct: 64 NWGQLGLG-SKRTVNKPTCVK--------ALKTEKVLLVACGRNHTLICTAQGKVFSSGG 114
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGI-FIKDVACGGVHSCALTSKGALYAWGGSQAG 313
S GQLG L ++ +R+ A D + +K +A G S ALT G L+ WG + G
Sbjct: 115 NSEGQLG---LGDCEERTTFQRIHAFDSLGPVKMLAAGSNTSAALTESGKLFMWGDNTEG 171
Query: 314 QLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNS 373
Q+GL ++ + S P E D V + V+CG+ H+ DG ++ +G
Sbjct: 172 QIGLAKESHAPS--PQEVD----------VGGPISWVSCGYYHSAFVTADGALYTFGECD 219
Query: 374 YGQ--AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLAD 413
G+ E+ P V V ++A GGGH+ L +
Sbjct: 220 SGKLGLTTEQLPRHRVPQMVKSIKEPVTQVACGGGHTVALTE 261
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 9/117 (7%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ +G GQ G + R+P+ P E F R +ACG HTA + G
Sbjct: 264 LFTFGLGQFGQLGHGTFIFESRLPR--PVEHF-----KKGRVCQVACGENHTAVITDGGL 316
Query: 83 LFTWGANEFGQLGDGTEE--GRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG 137
L+T+G G+LG G E + P + V++ +CG +A PR+ DG
Sbjct: 317 LYTFGDGRHGKLGLGEENFTNQFKPTVCSRFLKYGVQAATCGGCHMVVLARPRDGDG 373
>gi|402869932|ref|XP_003898997.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
[Papio anubis]
Length = 1023
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 121/258 (46%), Gaps = 39/258 (15%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I Q++CG H +ALS+ G L AWG N +GQLG G P++++ A
Sbjct: 139 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGV-------- 190
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
+ Q+S GE HS A+S +G VY+WG GQLG +S D P + ALD ++ +
Sbjct: 191 PLAQISAGEAHSMALSMSGNVYSWGKNEFGQLGLGHTESKDS---PSLIEALDNQKVEFL 247
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV---VPN 345
ACGG HS LT G L+ +G + GQLG N + R P LV V N
Sbjct: 248 ACGGSHSALLTQDGLLFTFGAGKHGQLG-----------HNSTQNELR--PCLVAELVGN 294
Query: 346 GVQLVACGHSHTLVYMRD-GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL--- 401
V +ACG HTL Y+ D G++ +G GQ N + P PV E KL
Sbjct: 295 RVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTLDQLIPLPVKVSSSEELKLESH 354
Query: 402 --------AAGGGHSAVL 411
AGG S +L
Sbjct: 355 TSEKELIMIAGGNQSILL 372
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 94/185 (50%), Gaps = 19/185 (10%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+KI Q++CG+YHS A+S+ GE++ WG GQLG + P+ V L G+ +
Sbjct: 137 KKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG--RKFPSTTTPQIVEHLAGVPLAQ 194
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP--- 344
++ G HS AL+ G +Y+WG ++ GQLGLG T ++ P L+
Sbjct: 195 ISAGEAHSMALSMSGNVYSWGKNEFGQLGLG-------------HTESKDSPSLIEALDN 241
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAA 403
V+ +ACG SH+ + +DG + +G +GQ + + P V VG V ++A
Sbjct: 242 QKVEFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIAC 301
Query: 404 GGGHS 408
G H+
Sbjct: 302 GRWHT 306
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 92/190 (48%), Gaps = 15/190 (7%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G GR+ Q+ L G P I+ G H+ A++ G
Sbjct: 158 LFAWGQNLHGQLGV-GRKFPSTTTPQIVEHLAGVPLA------QISAGEAHSMALSMSGN 210
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST- 141
+++WG NEFGQLG G E + P ++ L ++ V+ ++CG +A + + DG + T
Sbjct: 211 VYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALLTQ----DGLLFTF 266
Query: 142 --SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYNEYGQ 198
+ G N N R A + Q++CG H +A +S+ G + ++G + GQ
Sbjct: 267 GAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQ 326
Query: 199 LGRGITCEGL 208
LG G T + L
Sbjct: 327 LGNGGTLDQL 336
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 32/213 (15%)
Query: 62 SRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSIS 120
+ + I CG H+ A++ G LF WG N GQLG G + P+ V+ L + IS
Sbjct: 137 KKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQIS 196
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQN----------QGSNFPRLFWGAFTPNTIIC 170
G + A++ + ++ WG+N + + P L N +
Sbjct: 197 AGEAHSMALS---------MSGNVYSWGKNEFGQLGLGHTESKDSPSLIEA--LDNQKVE 245
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
++CG H L++ GLL +G ++GQLG T L+ V + ++
Sbjct: 246 FLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGN---------RV 296
Query: 231 TQVSCGEYHSAA-VSENGEVYTWGLGSVGQLGH 262
TQ++CG +H+ A VS+ G+V+++G G GQLG+
Sbjct: 297 TQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGN 329
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD-G 81
++ +G GQ G + +LR L EL G +R IACG HT A SD G
Sbjct: 263 LFTFGAGKHGQLGHNSTQNELR--PCLVAELVG------NRVTQIACGRWHTLAYVSDLG 314
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVK 117
+F++G+ + GQLG+G + P VK SE +K
Sbjct: 315 KVFSFGSGKDGQLGNGGTLDQLIPLPVKVSSSEELK 350
>gi|195432783|ref|XP_002064396.1| GK20144 [Drosophila willistoni]
gi|194160481|gb|EDW75382.1| GK20144 [Drosophila willistoni]
Length = 4996
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 147/308 (47%), Gaps = 49/308 (15%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ G +H A+ DG +F+WG E G+LG G P V+ L+++ ++ ++CG+ +
Sbjct: 3119 VHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHS 3178
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQ------GSNFPRLFWGAFT--PNTIICQVSCGS-- 176
AAI+ S L+ WG + G N +L T + QV+CGS
Sbjct: 3179 AAIS---------SQGELYTWGLGEYGRLGHGDNATQLKPKQVTALAGRRVIQVACGSRD 3229
Query: 177 VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG 236
+AL+E G + +WG ++G+LGRG EG P I+ + + Q+ CG
Sbjct: 3230 AQTLALTEDGAVFSWGDGDFGKLGRG-GSEGSATPHEIERLSGI--------GVIQIECG 3280
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL-PRRVVALDGIFIKDVACGGVHS 295
S A++ GEV+TWG G +LGH GD+ + P+ + L G + VA G +H
Sbjct: 3281 AQFSLALTRAGEVWTWGKGDYYRLGH----GGDQHVRKPQPIGGLRGRRVIHVAVGALHC 3336
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV---PNGVQLVAC 352
A+T G +YAWG + GQ G G +T+ P LV+ V VAC
Sbjct: 3337 LAVTDAGQVYAWGDNDHGQQGSG-------------NTFVNKKPALVIGLDAVFVNRVAC 3383
Query: 353 GHSHTLVY 360
G SH++ +
Sbjct: 3384 GSSHSIAW 3391
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 165/414 (39%), Gaps = 92/414 (22%)
Query: 7 IGETARPVDNIPAKSAIYVWGYNHSGQTG-RKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+GE+ +P + VWG N Q G KG + ++ Q L R +
Sbjct: 3015 LGESVAAEQELPC--TVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRL---------RPI 3063
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
I+ G + V+ DG +F G G+LG G P ++ L VK ++
Sbjct: 3064 HISGGSKSLFIVSQDGKVFACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVA----- 3118
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
V G H +AL+
Sbjct: 3119 ----------------------------------------------VHSGGKHALALTLD 3132
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + +WG E G+LG G L PR++ EA +KI V+CG HSAA+S
Sbjct: 3133 GKVFSWGEGEDGKLGHG-NRTTLDKPRLV--------EALRAKKIRDVACGSSHSAAISS 3183
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHSCALTSK 301
GE+YTWGLG G+LGH GD +L P++V AL G + VACG + ALT
Sbjct: 3184 QGELYTWGLGEYGRLGH-----GDNATQLKPKQVTALAGRRVIQVACGSRDAQTLALTED 3238
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
GA+++WG G+LG G S + P+E + I GV + CG +L
Sbjct: 3239 GAVFSWGDGDFGKLGRGGSEGSAT--PHEIER-LSGI-------GVIQIECGAQFSLALT 3288
Query: 362 RDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADA 414
R G + WG Y + + + P P+ G V +A G H + DA
Sbjct: 3289 RAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDA 3342
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 135/286 (47%), Gaps = 35/286 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R PK L L G DIACG H+AA+ S G
Sbjct: 4254 VYAWGEGEDGKLGHGNRMSYDR-PK-LVEHLNGMSVA------DIACGSAHSAAITSSGH 4305
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ TWG +G+LG G E + P+ V+ L I+CG+ + +++
Sbjct: 4306 VLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDN------ 4359
Query: 143 RLWVWGQNQ-------GSNFPRLFWGAFTPNTI-ICQVSCGSVHVVALSECGLLQAWGYN 194
+W WG GS+ +L + + + + +V CGS VAL++ G + WG
Sbjct: 4360 -VWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKG 4418
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
++ +LG G + + ++ P+ + A + +KI ++ G H A S+ GEVYTWG
Sbjct: 4419 DFHRLGHG-SVDHVRRPKKVA--------ALQGKKIISIATGSLHCVACSDAGEVYTWGD 4469
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
GQLG ++ + + PR V AL G I V CG H+ AL++
Sbjct: 4470 NDEGQLGDGTVTAIQR---PRLVAALQGKHIVKVTCGSAHTLALST 4512
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 139/320 (43%), Gaps = 45/320 (14%)
Query: 51 PELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQ 110
P L G + + + G +H A+ ++G ++ WG E G+LG G P+ V+
Sbjct: 4222 PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEH 4281
Query: 111 LQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFW 160
L V I+CG+ +AAI S+ + WG+ + P+L
Sbjct: 4282 LNGMSVADIACGSAHSAAIT---------SSGHVLTWGKGRYGRLGHGDSEDQLRPKLVE 4332
Query: 161 GAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF 220
I G + +++ + +WG +YG+LGRG +G + P I+ A
Sbjct: 4333 ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG-GSDGCKLPYKIESLAGL 4391
Query: 221 LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL 280
+ +V CG S A++++G VYTWG G +LGH S+ D P++V AL
Sbjct: 4392 --------GVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSV---DHVRRPKKVAAL 4440
Query: 281 DGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI 340
G I +A G +H A + G +Y WG + GQLG G + T + +
Sbjct: 4441 QGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDG------------TVTAIQRPRL 4488
Query: 341 LVVPNGVQL--VACGHSHTL 358
+ G + V CG +HTL
Sbjct: 4489 VAALQGKHIVKVTCGSAHTL 4508
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 173/410 (42%), Gaps = 62/410 (15%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S IY WG+NH GQ G G E RI P C A + R + +A G + AV D
Sbjct: 4146 STIYGWGHNHRGQLG--GLEGS-RIKTPTP-----CEALSLLRPVQLAGGEQSLFAVTPD 4197
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDG 137
G LF G G+LG G + P + LQ FVK ++ G HC A E
Sbjct: 4198 GKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTE------ 4251
Query: 138 TISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
++ WG+ + P+L + ++CGS H A++ G
Sbjct: 4252 ----GEVYAWGEGEDGKLGHGNRMSYDRPKLV--EHLNGMSVADIACGSAHSAAITSSGH 4305
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSE 245
+ WG YG+LG G + + L+ P++++ + + ++C G+ + +++
Sbjct: 4306 VLTWGKGRYGRLGHGDSEDQLR-PKLVEALLGY--------RAIDIACGSGDAQTLCITD 4356
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+ V++WG G G+LG D LP ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4357 DDNVWSWGDGDYGKLGR---GGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVY 4413
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRD 363
WG +LG G S + R + G ++ +A G H +
Sbjct: 4414 TWGKGDFHRLGHG------------SVDHVRRPKKVAALQGKKIISIATGSLHCVACSDA 4461
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
G ++ WG N GQ + T P V G+ + K+ G H+ L+
Sbjct: 4462 GEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4511
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 130/286 (45%), Gaps = 41/286 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G R + P L R D+ACG H+AA++S G
Sbjct: 3135 VFSWGEGEDGKLGHGNRTTLDK------PRLVEALRAKKIR--DVACGSSHSAAISSQGE 3186
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P++V L V ++CG+ +A DG +
Sbjct: 3187 LYTWGLGEYGRLGHGDNATQLKPKQVTALAGRRVIQVACGSRDAQTLA--LTEDGAV--- 3241
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+ WG +F +L G+ TP+ I + Q+ CG+ +AL+ G + W
Sbjct: 3242 --FSWGDG---DFGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTW 3296
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G + ++ P+ I G ++ V+ G H AV++ G+VY
Sbjct: 3297 GKGDYYRLGHGGD-QHVRKPQPIGGLRG--------RRVIHVAVGALHCLAVTDAGQVYA 3347
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
WG GQ G + K P V+ LD +F+ VACG HS A
Sbjct: 3348 WGDNDHGQQGSGNTFVNKK---PALVIGLDAVFVNRVACGSSHSIA 3390
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 122/280 (43%), Gaps = 38/280 (13%)
Query: 51 PELFGCPAG--ANSRWLDIA--CGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPE 106
PEL P A L IA C H A+ S+ ++WGA E +LG G R P
Sbjct: 600 PELEPQPIEELAQETILSIAGHCEGRHFLAIDSNRNAYSWGAGEDHRLGHGDTHARAVPT 659
Query: 107 KVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQ----------NQGSNFP 156
K+ L VK++ CG +AAI + L+ WG+ + P
Sbjct: 660 KISAL-DRCVKAVFCGCSYSAAITW---------SGNLYTWGRGTYGRLGHGNSDDQCVP 709
Query: 157 RLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKG 216
+ I + G H + L+ GL+ AWG +YG+LG G LQ P +++
Sbjct: 710 AIVMALAEYEIIDVALGSGDAHSLCLTSEGLVYAWGDGDYGKLGNGNCNSSLQ-PILVE- 767
Query: 217 YAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKEL-LPR 275
L ++ ++ G S A++ G +Y+WG S LGH ++ + +PR
Sbjct: 768 ---------TLPRVQRIFAGAQSSMALTTEGHLYSWGKASC--LGHQQVERSVQGCSVPR 816
Query: 276 RVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
V +L + DVA G H ALTS G ++ WG + + Q+
Sbjct: 817 LVSSLQHKRLVDVAVGVAHCLALTSCGEVFGWGRNDSQQI 856
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 97/215 (45%), Gaps = 32/215 (14%)
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
C H +A+ +WG E +LG G T R + LD + V
Sbjct: 622 CEGRHFLAIDSNRNAYSWGAGEDHRLGHGDT-----HARAVPTKISALDRC-----VKAV 671
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG- 292
CG +SAA++ +G +YTWG G+ G+LGH + D + +P V+AL I DVA G
Sbjct: 672 FCGCSYSAAITWSGNLYTWGRGTYGRLGH---GNSDDQCVPAIVMALAEYEIIDVALGSG 728
Query: 293 -VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQL 349
HS LTS+G +YAWG G+LG G S PILV +P VQ
Sbjct: 729 DAHSLCLTSEGLVYAWGDGDYGKLGNGNCNSSLQ-------------PILVETLPR-VQR 774
Query: 350 VACGHSHTLVYMRDGRIHGWGYNS-YGQAANEKST 383
+ G ++ +G ++ WG S G E+S
Sbjct: 775 IFAGAQSSMALTTEGHLYSWGKASCLGHQQVERSV 809
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 138/344 (40%), Gaps = 64/344 (18%)
Query: 51 PELFGCPAGANSRWL--DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
P L G N R+ IAC ++ DG L+ +LG E P+ +
Sbjct: 558 PLLVGSLPLLNCRFQVKQIACSESLLLLLSQDGKLYNC------RLGKPELE----PQPI 607
Query: 109 KQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI 168
++L E + SI+ HC E R S + WG + RL G +
Sbjct: 608 EELAQETILSIA--GHC-----EGRHFLAIDSNRNAYSWGAGEDH---RLGHGDTHARAV 657
Query: 169 ICQVS----------CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYA 218
++S CG + A++ G L WG YG+LG G + P ++ A
Sbjct: 658 PTKISALDRCVKAVFCGCSYSAAITWSGNLYTWGRGTYGRLGHG-NSDDQCVPAIVMALA 716
Query: 219 KFLDEAPELEKITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGH----CSLQSGDKEL 272
++ +I V+ G + HS ++ G VY WG G G+LG+ SLQ E
Sbjct: 717 EY--------EIIDVALGSGDAHSLCLTSEGLVYAWGDGDYGKLGNGNCNSSLQPILVET 768
Query: 273 LPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESD 332
LPR ++ + G S ALT++G LY+WG +A LG RS +
Sbjct: 769 LPR---------VQRIFAGAQSSMALTTEGHLYSWG--KASCLGHQQVERSV-----QGC 812
Query: 333 TYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+ R + L V VA G +H L G + GWG N Q
Sbjct: 813 SVPRLVSSLQHKRLVD-VAVGVAHCLALTSCGEVFGWGRNDSQQ 855
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 79/181 (43%), Gaps = 21/181 (11%)
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG 292
C H A+ N Y+WG G +LGH GD +P ++ ALD +K V CG
Sbjct: 622 CEGRHFLAIDSNRNAYSWGAGEDHRLGH-----GDTHARAVPTKISALDRC-VKAVFCGC 675
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVAC 352
+S A+T G LY WG G+LG G N D I + + + VA
Sbjct: 676 SYSAAITWSGNLYTWGRGTYGRLGHG----------NSDDQCVPAIVMALAEYEIIDVAL 725
Query: 353 G--HSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAV 410
G +H+L +G ++ WG YG+ N + P V+ + V+++ AG S
Sbjct: 726 GSGDAHSLCLTSEGLVYAWGDGDYGKLGNGNCNSSLQPILVE-TLPRVQRIFAGAQSSMA 784
Query: 411 L 411
L
Sbjct: 785 L 785
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 84/191 (43%), Gaps = 35/191 (18%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
++ Q++C E +S++G++Y +C L G EL P+ + L I +
Sbjct: 572 QVKQIACSESLLLLLSQDGKLY-----------NCRL--GKPELEPQPIEELAQETILSI 618
Query: 289 A--CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIP--ILVVP 344
A C G H A+ S Y+WG + +LG G DT+ R +P I +
Sbjct: 619 AGHCEGRHFLAIDSNRNAYSWGAGEDHRLGHG-------------DTHARAVPTKISALD 665
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV----DWCVGEVRK 400
V+ V CG S++ G ++ WG +YG+ + S P+ V ++ + +V
Sbjct: 666 RCVKAVFCGCSYSAAITWSGNLYTWGRGTYGRLGHGNSDDQCVPAIVMALAEYEIIDV-A 724
Query: 401 LAAGGGHSAVL 411
L +G HS L
Sbjct: 725 LGSGDAHSLCL 735
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 34/70 (48%)
Query: 63 RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG 122
R + +A G H AV G ++ WG N+ GQ G G K P V L + FV ++CG
Sbjct: 3325 RVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACG 3384
Query: 123 AHCTAAIAEP 132
+ + A P
Sbjct: 3385 SSHSIAWGLP 3394
>gi|327261081|ref|XP_003215360.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Anolis
carolinensis]
Length = 526
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/263 (32%), Positives = 123/263 (46%), Gaps = 25/263 (9%)
Query: 148 GQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEG 207
G Q S PR I C HVV + G + WG+N Y QLG G T
Sbjct: 57 GDTQNSVEPRRL-DTLCGKKITCLSYGSGPHVVVATAEGEVYTWGHNAYSQLGNGTTNNS 115
Query: 208 LQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQS 267
L ++ +K+T+V+CG +HS ++ +GEVYTWG + GQ+G S +
Sbjct: 116 LLPCQISTNLVN--------KKVTEVACGSHHSMILTSDGEVYTWGYNNSGQVGSGSTAN 167
Query: 268 GDKELLPRRVVA-LDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSL 326
+ +PRRV + L ++ACG + S A+ G +Y WG + GQLGLG +
Sbjct: 168 ---QAIPRRVTSCLQNKIAVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGNSGNQPTP 224
Query: 327 IPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAW 386
+ R VQ VACG++HTLV +G+++ WG NSYGQ +
Sbjct: 225 CRIAALQGIR----------VQRVACGYAHTLVLTDEGQMYAWGANSYGQLGTGNRSNQS 274
Query: 387 YPSPVDWCVGEVRKLAAGGGHSA 409
YP P+ V + R + HSA
Sbjct: 275 YPVPIT--VDKDRVIEIAACHSA 295
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 137/307 (44%), Gaps = 45/307 (14%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTAAIAEPRE 134
V + +F G N G LG G + P ++ L + + +S G+ H A AE
Sbjct: 37 VTENNEVFALGTNCSGCLGVGDTQNSVEPRRLDTLCGKKITCLSYGSGPHVVVATAE--- 93
Query: 135 NDGTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTI---ICQVSCGSVHVVALSEC 185
++ WG N G+ L + N + + +V+CGS H + L+
Sbjct: 94 -------GEVYTWGHNAYSQLGNGTTNNSLLPCQISTNLVNKKVTEVACGSHHSMILTSD 146
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + WGYN GQ+G G T RV + ++CG+ S AV E
Sbjct: 147 GEVYTWGYNNSGQVGSGSTANQAIPRRVTSCLQNKI--------AVNIACGQMCSMAVVE 198
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
NGEVY WG GQLG L + + P R+ AL GI ++ VACG H+ LT +G +Y
Sbjct: 199 NGEVYVWGYNGNGQLG---LGNSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQMY 255
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV-QLVACGHSHTLVYMRDG 364
AWG + GQLG G RS P +PI V + V ++ AC +HT G
Sbjct: 256 AWGANSYGQLGTG--NRSNQSYP---------VPITVDKDRVIEIAACHSAHTSAAKTQG 304
Query: 365 -RIHGWG 370
+++ WG
Sbjct: 305 SQVYMWG 311
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 115/246 (46%), Gaps = 37/246 (15%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A+ +Y WG+N Q G L +P Q+ L N + ++ACG H+ +
Sbjct: 92 AEGEVYTWGHNAYSQLGNGTTNNSL-LPCQISTNL------VNKKVTEVACGSHHSMILT 144
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDG 137
SDG ++TWG N GQ+G G+ + P +V LQ++ +I+CG C+ A+ E E
Sbjct: 145 SDGEVYTWGYNNSGQVGSGSTANQAIPRRVTSCLQNKIAVNIACGQMCSMAVVENGE--- 201
Query: 138 TISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQ 189
++VWG N N P A + +V+CG H + L++ G +
Sbjct: 202 ------VYVWGYNGNGQLGLGNSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQMY 255
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENG 247
AWG N YGQLG G R + Y + + +++ ++ +C H SAA ++
Sbjct: 256 AWGANSYGQLG--------TGNRSNQSYP--VPITVDKDRVIEIAACHSAHTSAAKTQGS 305
Query: 248 EVYTWG 253
+VY WG
Sbjct: 306 QVYMWG 311
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 121/279 (43%), Gaps = 48/279 (17%)
Query: 63 RWLDIACGHE----------HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK-QL 111
R LD CG + H ++G ++TWG N + QLG+GT P ++ L
Sbjct: 66 RRLDTLCGKKITCLSYGSGPHVVVATAEGEVYTWGHNAYSQLGNGTTNNSLLPCQISTNL 125
Query: 112 QSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSN----------FPRLFWG 161
++ V ++CG+H + + S ++ WG N PR
Sbjct: 126 VNKKVTEVACGSHHSMILT---------SDGEVYTWGYNNSGQVGSGSTANQAIPRRVTS 176
Query: 162 AFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFL 221
N I ++CG + +A+ E G + WGYN GQLG G + R+
Sbjct: 177 CLQ-NKIAVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGNSGNQPTPCRI-------- 227
Query: 222 DEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVA 279
A + ++ +V+CG H+ +++ G++Y WG S GQLG +G++ + P +
Sbjct: 228 -AALQGIRVQRVACGYAHTLVLTDEGQMYAWGANSYGQLG-----TGNRSNQSYPVPITV 281
Query: 280 LDGIFIKDVACGGVHSCALTSKGA-LYAWGGSQAGQLGL 317
I+ AC H+ A ++G+ +Y WG + + L
Sbjct: 282 DKDRVIEIAACHSAHTSAAKTQGSQVYMWGQCRGQSITL 320
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 20/151 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G Q P A R +ACG+ HT + +G
Sbjct: 202 VYVWGYNGNGQLGLGNSGNQ--------PTPCRIAALQGIRVQRVACGYAHTLVLTDEGQ 253
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
++ WGAN +GQLG G + +P + + ++ +C AH +AA +
Sbjct: 254 MYAWGANSYGQLGTGNRSNQSYPVPITVDKDRVIEIAACHSAHTSAAKTQ---------G 304
Query: 142 SRLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
S++++WGQ +G + P L A T + C
Sbjct: 305 SQVYMWGQCRGQSITLPYLTHFACTDDVFAC 335
>gi|332233500|ref|XP_003265940.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Nomascus leucogenys]
Length = 1024
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 121/258 (46%), Gaps = 39/258 (15%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I Q++CG H +ALS+ G L AWG N +GQLG G P++++ A
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGV-------- 191
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
+ Q+S GE HS A+S +G +Y+WG GQLG +S D P + ALD ++ +
Sbjct: 192 PLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKD---YPSLIEALDNQEVEFL 248
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV---VPN 345
ACGG HS LT G L+ +G + GQLG N + R P LV V N
Sbjct: 249 ACGGSHSALLTQDGLLFTFGAGKHGQLG-----------HNSTQNELR--PCLVAELVGN 295
Query: 346 GVQLVACGHSHTLVYMRD-GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL--- 401
V +ACG HTL Y+ D G++ +G GQ N + P PV E KL
Sbjct: 296 RVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLIPLPVKVSSSEELKLETH 355
Query: 402 --------AAGGGHSAVL 411
AGG S +L
Sbjct: 356 TSEKELIMIAGGNQSILL 373
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 93/182 (51%), Gaps = 13/182 (7%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+KI Q++CG+YHS A+S+ GE++ WG GQLG + P+ V L G+ +
Sbjct: 138 KKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG--RKFPSTTTPQIVEHLAGVPLAQ 195
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
++ G HS AL+ G +Y+WG ++ GQLGLG ES Y I L V
Sbjct: 196 ISAGEAHSMALSMSGNIYSWGKNEFGQLGLG---------HTESKDYPSLIEAL-DNQEV 245
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGG 406
+ +ACG SH+ + +DG + +G +GQ + + P V VG V ++A G
Sbjct: 246 EFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRW 305
Query: 407 HS 408
H+
Sbjct: 306 HT 307
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 32/213 (15%)
Query: 62 SRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSIS 120
+ + I CG H+ A++ G LF WG N GQLG G + P+ V+ L + IS
Sbjct: 138 KKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQIS 197
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQN----------QGSNFPRLFWGAFTPNTIIC 170
G + A++ + ++ WG+N + ++P L N +
Sbjct: 198 AGEAHSMALS---------MSGNIYSWGKNEFGQLGLGHTESKDYPSLIEAL--DNQEVE 246
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
++CG H L++ GLL +G ++GQLG T L+ V + ++
Sbjct: 247 FLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGN---------RV 297
Query: 231 TQVSCGEYHSAA-VSENGEVYTWGLGSVGQLGH 262
TQ++CG +H+ A VS+ G+V+++G G GQLG+
Sbjct: 298 TQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGN 330
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 93/190 (48%), Gaps = 15/190 (7%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G GR+ Q+ L G P I+ G H+ A++ G
Sbjct: 159 LFAWGQNLHGQLG-VGRKFPSTTTPQIVEHLAGVPLA------QISAGEAHSMALSMSGN 211
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST- 141
+++WG NEFGQLG G E + +P ++ L ++ V+ ++CG +A + + DG + T
Sbjct: 212 IYSWGKNEFGQLGLGHTESKDYPSLIEALDNQEVEFLACGGSHSALLTQ----DGLLFTF 267
Query: 142 --SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYNEYGQ 198
+ G N N R A + Q++CG H +A +S+ G + ++G + GQ
Sbjct: 268 GAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQ 327
Query: 199 LGRGITCEGL 208
LG G T + L
Sbjct: 328 LGNGGTRDQL 337
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD-G 81
++ +G GQ G + +LR L EL G +R IACG HT A SD G
Sbjct: 264 LFTFGAGKHGQLGHNSTQNELR--PCLVAELVG------NRVTQIACGRWHTLAYVSDLG 315
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVK 117
+F++G+ + GQLG+G + P VK SE +K
Sbjct: 316 KVFSFGSGKDGQLGNGGTRDQLIPLPVKVSSSEELK 351
>gi|282722854|gb|ADA84473.1| retinitis pigmentosa GTPase regulator protein 2 1-17 isoform [Danio
rerio]
Length = 708
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 115/359 (32%), Positives = 174/359 (48%), Gaps = 34/359 (9%)
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
N L I+CG EHTA V +G LF +G+N +GQLG GT+ P VK L+SE VK +
Sbjct: 35 NDVPLRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALRSERVKLTA 94
Query: 121 CGAHCTAAIAEPREND---GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSV 177
CG T R N G + +L + N ++F + + F I ++ GS
Sbjct: 95 CGRTHTLVFTS-RGNLYACGGNNEGQLGLGDCNDRTSFHLVEF--FNKQGPIKMLAAGSN 151
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
AL++ G L G N GQ+G G L V G +++ VSCG
Sbjct: 152 TSAALTQDGRLYMRGDNSEGQIGLGKESNALTPQEVSVG-----------KRVFWVSCGY 200
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
YHSA V+ +G +YT+G G+LG + + + + +P++V + ++ VACGG H+ A
Sbjct: 201 YHSAFVTVDGALYTFGEKDSGKLGLSTEKLANHK-VPQQVTDIPDRVVQ-VACGGGHTVA 258
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSF-SLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
LT + +Y++G Q GQLG G T F S +P + +FR V+ ACG +H
Sbjct: 259 LT-ENEVYSFGLGQFGQLGHG--TFIFESRLPRVVE-HFRK-------GRVKHAACGENH 307
Query: 357 TLVYMRDGRIHGWGYNSYGQ--AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLA 412
T + +G ++ +G +G+ E T + P+ + V + GG H VLA
Sbjct: 308 TALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCGGCHMLVLA 366
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 122/280 (43%), Gaps = 43/280 (15%)
Query: 144 LWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
++ +G+++ N P FW N + ++SCG H ++E G L +G N +GQLG G
Sbjct: 15 VFTFGKSKFADNAPSKFW---LKNDVPLRISCGDEHTALVTENGKLFMFGSNNWGQLGLG 71
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ--L 260
T + P +K A E++ +CG H+ + G +Y G + GQ L
Sbjct: 72 -TKTTVNKPTCVK--------ALRSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGL 122
Query: 261 GHCSLQSGDKELLPRRVVALDGIF-----IKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
G C+ R L F IK +A G S ALT G LY G + GQ+
Sbjct: 123 GDCN---------DRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMRGDNSEGQI 173
Query: 316 GLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
GLG + S +L P E + V V V+CG+ H+ DG ++ +G G
Sbjct: 174 GLGKE--SNALTPQE----------VSVGKRVFWVSCGYYHSAFVTVDGALYTFGEKDSG 221
Query: 376 Q--AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLAD 413
+ + EK P V V ++A GGGH+ L +
Sbjct: 222 KLGLSTEKLANHKVPQQVTDIPDRVVQVACGGGHTVALTE 261
>gi|281347459|gb|EFB23043.1| hypothetical protein PANDA_001337 [Ailuropoda melanoleuca]
Length = 1199
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 122/413 (29%), Positives = 190/413 (46%), Gaps = 53/413 (12%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++CG EHTA V + L+ +G+N +GQLG G++ P VK L+ E VK +CG + T
Sbjct: 30 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSTVNKPTCVKALKPEKVKFAACGRNHT 89
Query: 127 AAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
E + G + +L + ++ ++F + + FT I Q+S GS AL+E
Sbjct: 90 LVSTEGGKVYASGGNNEGQLGLGDTDERNSFHLISF--FTSQRKIKQLSAGSNTSAALTE 147
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G L WG N GQ+G +V G + I+ +SCG YHSA V+
Sbjct: 148 DGELFMWGDNSEGQIGLKNITNVCVPQQVTVG-----------KPISWISCGYYHSAFVT 196
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
GE+YT+G G+LG Q +P+ V + ++ VACGG H+ LT K A+
Sbjct: 197 TEGELYTFGEPESGKLG-LPKQLLVNHRMPQSVPGIPEKVVQ-VACGGGHTVVLTEK-AV 253
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ-----LVACGHSHTLV 359
Y +G Q GQLGLG T+ P+ V ++ + CG +HT +
Sbjct: 254 YTFGLGQFGQLGLG--------------TFLFETPVPKVIEHIKDLKISSIFCGENHTAL 299
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV---DWCVGEVRKLAAGGGHSAVLA---- 412
G ++ +G +G+ + +P ++ V+ +A GG H+ V A
Sbjct: 300 ITDLGLMYTFGDGRHGKLGLGLENFTNQFTPTLCSNFLRFIVQLVACGGCHTLVFATPRL 359
Query: 413 ---DACSLKELCEFRLAE--SVTLSNASEIEDVASRTGSEALARLCERLREHS 460
+ L+++ E S+ +SN S +V RT S AR+ R RE S
Sbjct: 360 SGTEEMELEQINNSYFPETPSLPISNLSS-GNVLHRTLS---ARMRRREREKS 408
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 122/286 (42%), Gaps = 51/286 (17%)
Query: 144 LWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
++ +G+ + N P FW N I +SCG H ++ L +G N +GQLG G
Sbjct: 4 VFTFGKTKFAENIPSKFWFK---NDIPAFLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLG 60
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
+ + P +K A + EK+ +CG H+ +E G+VY G + GQLG
Sbjct: 61 -SKSTVNKPTCVK--------ALKPEKVKFAACGRNHTLVSTEGGKVYASGGNNEGQLGL 111
Query: 263 CSLQSGDKELLPRRVVALDGIF-----IKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GD + R L F IK ++ G S ALT G L+ WG + GQ+GL
Sbjct: 112 -----GDTD--ERNSFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGL 164
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQL------VACGHSHTLVYMRDGRIHGWGY 371
+NI + VP V + ++CG+ H+ +G ++ +G
Sbjct: 165 ------------------KNITNVCVPQQVTVGKPISWISCGYYHSAFVTTEGELYTFGE 206
Query: 372 NSYGQAANEKSTYAWY--PSPVDWCVGEVRKLAAGGGHSAVLADAC 415
G+ K + P V +V ++A GGGH+ VL +
Sbjct: 207 PESGKLGLPKQLLVNHRMPQSVPGIPEKVVQVACGGGHTVVLTEKA 252
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 102/233 (43%), Gaps = 47/233 (20%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+++WG N GQ G K + +P+Q+ G W I+CG+ H+A V ++G
Sbjct: 151 LFMWGDNSEGQIGLKNI-TNVCVPQQV-------TVGKPISW--ISCGYYHSAFVTTEGE 200
Query: 83 LFTWGANEFGQLGDGTEEGRKH--PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
L+T+G E G+LG + H P+ V + + V+ ++CG T + E
Sbjct: 201 LYTFGEPESGKLGLPKQLLVNHRMPQSVPGIPEKVVQ-VACGGGHTVVLTE--------- 250
Query: 141 TSRLWVWGQNQGSNFPRLFWGAF-----TPNTI-------ICQVSCGSVHVVALSECGLL 188
++ +G Q F +L G F P I I + CG H +++ GL+
Sbjct: 251 -KAVYTFGLGQ---FGQLGLGTFLFETPVPKVIEHIKDLKISSIFCGENHTALITDLGLM 306
Query: 189 QAWGYNEYGQLGRGITCEGLQ-GPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
+G +G+LG G+ Q P + + +F+ + V+CG H+
Sbjct: 307 YTFGDGRHGKLGLGLENFTNQFTPTLCSNFLRFI--------VQLVACGGCHT 351
>gi|242014091|ref|XP_002427731.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
gi|212512172|gb|EEB14993.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
Length = 4834
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/308 (31%), Positives = 148/308 (48%), Gaps = 49/308 (15%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ G +H A+ DG +F+WG E G+LG P+ ++ L+S+ ++ I+CG+ +
Sbjct: 3077 VHSGGKHAMALTLDGKVFSWGEGEDGKLGHDNRLSLDRPKMIEALKSKRIRDIACGSSHS 3136
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQ------GSNF----PRLFWGAFTPNTIICQVSCGS 176
AAI+ ST L+ WG + G N P+L + I QV+CGS
Sbjct: 3137 AAIS---------STGELFTWGLGEYGRLGHGDNLTQLRPKLVKALLGHH--IVQVACGS 3185
Query: 177 --VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
+ALS GL+ +WG ++G+LGRG EG P I+ + +
Sbjct: 3186 RDAQTLALSAEGLVFSWGDGDFGKLGRG-GSEGCDIPHNIERLNGL--------GVCMIE 3236
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVH 294
CG S A+++ G+VYTWG G +LGH S Q K P V +L I VA G +H
Sbjct: 3237 CGAQFSLALTKFGQVYTWGKGDYFRLGHGSDQHVRK---PTLVESLSEKKIVHVAVGALH 3293
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VAC 352
T +G +YAWG + GQ G G +++ N + N+ GV++ VAC
Sbjct: 3294 CLCATDQGQVYAWGDNDHGQQGNG------TILVNRKPSLVLNL------EGVRVNRVAC 3341
Query: 353 GHSHTLVY 360
G SH++ +
Sbjct: 3342 GSSHSIAW 3349
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 142/289 (49%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G+ G + +L + + P++ A + R DIACG H+AA++S G
Sbjct: 3093 VFSWG---EGEDGKLGHDNRLSLDR---PKMI--EALKSKRIRDIACGSSHSAAISSTGE 3144
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFTWG E+G+LG G + P+ VK L + ++CG+ +A E
Sbjct: 3145 LFTWGLGEYGRLGHGDNLTQLRPKLVKALLGHHIVQVACGSRDAQTLALSAE-------G 3197
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P+ I +C + CG+ +AL++ G + W
Sbjct: 3198 LVFSWGD---GDFGKLGRGGSEGCDIPHNIERLNGLGVCMIECGAQFSLALTKFGQVYTW 3254
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G + + ++ P +++ ++ +KI V+ G H ++ G+VY
Sbjct: 3255 GKGDYFRLGHG-SDQHVRKPTLVESLSE--------KKIVHVAVGALHCLCATDQGQVYA 3305
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ ++ K P V+ L+G+ + VACG HS A T+
Sbjct: 3306 WGDNDHGQQGNGTILVNRK---PSLVLNLEGVRVNRVACGSSHSIAWTT 3351
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 154/335 (45%), Gaps = 61/335 (18%)
Query: 72 EHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
+H+ A++ DG +++WG + G+LG G R P K+ +L + V ISCGA +AA+
Sbjct: 531 KHSLALSCDGDVYSWGNGDGGRLGHGDNNSRDQPTKITELVGKNVIHISCGATYSAAVT- 589
Query: 132 PRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-----------ICQVSCGS--VH 178
S+ ++ WG+ N+ RL G +T+ I ++CGS
Sbjct: 590 --------SSGEVYTWGR---GNYGRLGHGTSEDHTVPTLVVGLKDYFIVDIACGSGDAQ 638
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
+A++ GL+ +WG + +G + P++I+ ++ +V CG
Sbjct: 639 TLAVTNTGLVFSWG-DGGYGKLGTGGSDGSKTPKLIEKLQDI--------EVARVYCGSQ 689
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
S A++++G VYTWG G +LGH S + P+ V L+G IK VA G H AL
Sbjct: 690 FSLALTKSGSVYTWGKGDNHRLGH---GSENHVRFPKLVEGLNGKCIKKVAVGSGHVLAL 746
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRS-----FSLI-----------PNE------SDTYFR 336
T G +Y WG + GQ+G +T +L+ PN+ S+TY
Sbjct: 747 TDDGEVYGWGRNDNGQVGETSETNVSEPTLLTLLQGKNIVDIDCGPNQSIAWSSSNTYSI 806
Query: 337 NIPILVVPNGVQLVACGHSHTLVYMRDG--RIHGW 369
N+ + V + + C + L+ + +G R H W
Sbjct: 807 NLRVAFVVDICEETFCCLNQLLMVVSEGVCRSHDW 841
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 170/408 (41%), Gaps = 66/408 (16%)
Query: 21 SAIYVWGYNHSGQTG-RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+ ++VWG N Q G KG + ++ + + L + + IA G + V+
Sbjct: 2985 TKVFVWGLNDKDQLGGLKGSKVKVPVYSESLTAL---------KPIHIAGGSKSLFIVSY 3035
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPREND 136
DG L+ G G+LG G P ++ L +K ++ G H A D
Sbjct: 3036 DGKLYACGEGTNGRLGLGHSNNVATPCQLTSLNQYVIKKVAVHSGGKHAMALTL-----D 3090
Query: 137 GTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
G +++ WG+ + P++ + I ++CGS H A+S G
Sbjct: 3091 G-----KVFSWGEGEDGKLGHDNRLSLDRPKMIEALKSKR--IRDIACGSSHSAAISSTG 3143
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAVS 244
L WG EYG+LG G L+ P+++K I QV+CG + + A+S
Sbjct: 3144 ELFTWGLGEYGRLGHGDNLTQLR-PKLVKALLG--------HHIVQVACGSRDAQTLALS 3194
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
G V++WG G G+LG + D +P + L+G+ + + CG S ALT G +
Sbjct: 3195 AEGLVFSWGDGDFGKLGRGGSEGCD---IPHNIERLNGLGVCMIECGAQFSLALTKFGQV 3251
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV---VPNGVQLVACGHSHTLVYM 361
Y WG +LG G SD + R P LV + VA G H L
Sbjct: 3252 YTWGKGDYFRLGHG------------SDQHVRK-PTLVESLSEKKIVHVAVGALHCLCAT 3298
Query: 362 RDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
G+++ WG N +GQ N PS V G V ++A G HS
Sbjct: 3299 DQGQVYAWGDNDHGQQGNGTILVNRKPSLVLNLEGVRVNRVACGSSHS 3346
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 153/329 (46%), Gaps = 55/329 (16%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P L + + + G +H A+++DG +++WG + G+LG G + G HP+ +
Sbjct: 4042 LTPTLLESIQHIFIKKVAVNSGGKHCLALSTDGKVYSWGEGDDGKLGHGNKNGCDHPQLI 4101
Query: 109 KQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFT 164
LQ + + I+CG +AA+ E ++ WG+ + + RL G
Sbjct: 4102 DALQGKEIVDIACGGAHSAAVTAGGE---------IYTWGKGR---YGRLGHGDSEDQMK 4149
Query: 165 PNTI-------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIK 215
P + + ++CGS + +++ + +WG +YG+LGRG +G + P I+
Sbjct: 4150 PKLVETLIGFKVIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG-GSDGCKIPMKIE 4208
Query: 216 GYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL-P 274
A + +V CG S A++ +G VYTWG G +LGH S D+ + P
Sbjct: 4209 SLAGL--------GVVKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGS----DEHVRHP 4256
Query: 275 RRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTY 334
+++ AL G I +A G +H A + G ++ WG + GQLG G +
Sbjct: 4257 KKIAALQGKKIICIATGSLHCVACSDLGEVFTWGDNDEGQLGDGTM-----------NAI 4305
Query: 335 FRNIPILVVP---NGVQLVACGHSHTLVY 360
R P LVV + VACG +H+L +
Sbjct: 4306 HR--PRLVVTLQGKNINRVACGSAHSLAW 4332
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 133/292 (45%), Gaps = 35/292 (11%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G + P+L G +DIACG H+AAV + G
Sbjct: 4076 VYSWGEGDDGKLGHGNKNGCDH------PQLIDALQG--KEIVDIACGGAHSAAVTAGGE 4127
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++TWG +G+LG G E + P+ V+ L V I+CG+ + +++
Sbjct: 4128 IYTWGKGRYGRLGHGDSEDQMKPKLVETLIGFKVIDIACGSGDAQTLCITDDDN------ 4181
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
+W WG R G P I + +V CGS VAL+ G + WG
Sbjct: 4182 -VWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGSVYTWGKG 4240
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + E ++ P+ I A + +KI ++ G H A S+ GEV+TWG
Sbjct: 4241 DYHRLGHG-SDEHVRHPKKIA--------ALQGKKIICIATGSLHCVACSDLGEVFTWGD 4291
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
GQLG ++ + + PR VV L G I VACG HS A ++ + A
Sbjct: 4292 NDEGQLGDGTMNAIHR---PRLVVTLQGKNINRVACGSAHSLAWSTNKSTSA 4340
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 176/406 (43%), Gaps = 64/406 (15%)
Query: 22 AIYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
IY WG+NH GQ G G E +++IP C A + R + + G + AV SD
Sbjct: 3969 TIYGWGHNHRGQLG--GVEGPKVKIPT-------SCEALSALRPVQLVGGEQTLLAVTSD 4019
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDG 137
G ++ G G+LG G + P ++ +Q F+K ++ G HC A DG
Sbjct: 4020 GKVYATGYGAGGRLGLGGTDTILTPTLLESIQHIFIKKVAVNSGGKHCLAL-----STDG 4074
Query: 138 TISTSRLWVWGQ----------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
+++ WG+ G + P+L A I+ ++CG H A++ G
Sbjct: 4075 -----KVYSWGEGDDGKLGHGNKNGCDHPQLI-DALQGKEIV-DIACGGAHSAAVTAGGE 4127
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSE 245
+ WG YG+LG G E P++++ F K+ ++C G+ + +++
Sbjct: 4128 IYTWGKGRYGRLGHG-DSEDQMKPKLVETLIGF--------KVIDIACGSGDAQTLCITD 4178
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+ V++WG G G+LG D +P ++ +L G+ + V CG S ALT G++Y
Sbjct: 4179 DDNVWSWGDGDYGKLGR---GGSDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGSVY 4235
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRD 363
WG +LG G SD + R+ + G ++ +A G H +
Sbjct: 4236 TWGKGDYHRLGHG------------SDEHVRHPKKIAALQGKKIICIATGSLHCVACSDL 4283
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHS 408
G + WG N GQ + P V G+ + ++A G HS
Sbjct: 4284 GEVFTWGDNDEGQLGDGTMNAIHRPRLVVTLQGKNINRVACGSAHS 4329
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 133/291 (45%), Gaps = 45/291 (15%)
Query: 23 IYVWGYNHSGQTG---RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+Y WG G+ G R++ +I EL G + I+CG ++AAV S
Sbjct: 542 VYSWGNGDGGRLGHGDNNSRDQPTKIT-----ELVG------KNVIHISCGATYSAAVTS 590
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
G ++TWG +G+LG GT E P V L+ F+ I+CG+ +A
Sbjct: 591 SGEVYTWGRGNYGRLGHGTSEDHTVPTLVVGLKDYFIVDIACGSGDAQTLA-------VT 643
Query: 140 STSRLWVWGQ----------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQ 189
+T ++ WG + GS P+L + + +V CGS +AL++ G +
Sbjct: 644 NTGLVFSWGDGGYGKLGTGGSDGSKTPKLI--EKLQDIEVARVYCGSQFSLALTKSGSVY 701
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
WG + +LG G + ++ P++++G + I +V+ G H A++++GEV
Sbjct: 702 TWGKGDNHRLGHG-SENHVRFPKLVEGLNG--------KCIKKVAVGSGHVLALTDDGEV 752
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
Y WG GQ+G S + + P + L G I D+ CG S A +S
Sbjct: 753 YGWGRNDNGQVGETSETNVSE---PTLLTLLQGKNIVDIDCGPNQSIAWSS 800
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 114/241 (47%), Gaps = 29/241 (12%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H +ALS G + +WG + G+LG G Q ++ + K + +SCG
Sbjct: 532 HSLALSCDGDVYSWGNGDGGRLGHGDNNSRDQPTKITELVGK---------NVIHISCGA 582
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHS 295
+SAAV+ +GEVYTWG G+ G+LGH + + +P VV L FI D+ACG +
Sbjct: 583 TYSAAVTSSGEVYTWGRGNYGRLGH---GTSEDHTVPTLVVGLKDYFIVDIACGSGDAQT 639
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQ--TRSFSLIPNESDTYFRNIPILVVPNGVQLVACG 353
A+T+ G +++WG G+LG G +++ LI D V V CG
Sbjct: 640 LAVTNTGLVFSWGDGGYGKLGTGGSDGSKTPKLIEKLQDI------------EVARVYCG 687
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
+L + G ++ WG + + + +P V+ G+ ++K+A G GH L
Sbjct: 688 SQFSLALTKSGSVYTWGKGDNHRLGHGSENHVRFPKLVEGLNGKCIKKVAVGSGHVLALT 747
Query: 413 D 413
D
Sbjct: 748 D 748
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 141/339 (41%), Gaps = 30/339 (8%)
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
GT++ WG N GQLG K P + L + + G A+ + T
Sbjct: 3968 GTIYGWGHNHRGQLGGVEGPKVKIPTSCEALSALRPVQLVGGEQTLLAVTSDGKVYATGY 4027
Query: 141 TSRLWVWGQNQGSNF-PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
+ + + P L V+ G H +ALS G + +WG + G+L
Sbjct: 4028 GAGGRLGLGGTDTILTPTLLESIQHIFIKKVAVNSGGKHCLALSTDGKVYSWGEGDDGKL 4087
Query: 200 GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ 259
G G G P++I +A + ++I ++CG HSAAV+ GE+YTWG G G+
Sbjct: 4088 GHG-NKNGCDHPQLI--------DALQGKEIVDIACGGAHSAAVTAGGEIYTWGKGRYGR 4138
Query: 260 LGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQL 315
LGH GD E + P+ V L G + D+ACG + +T +++WG G+L
Sbjct: 4139 LGH-----GDSEDQMKPKLVETLIGFKVIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL 4193
Query: 316 GLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
G G + ES + GV V CG ++ R G ++ WG Y
Sbjct: 4194 GRGGSDGCKIPMKIES----------LAGLGVVKVECGSQFSVALTRSGSVYTWGKGDYH 4243
Query: 376 QAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ + + +P + G ++ +A G H +D
Sbjct: 4244 RLGHGSDEHVRHPKKIAALQGKKIICIATGSLHCVACSD 4282
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 109/242 (45%), Gaps = 40/242 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACG--HEHT 74
+ A IY WG G+ G E Q++ P+L G + +DIACG T
Sbjct: 4122 VTAGGEIYTWGKGRYGRLGHGDSEDQMK------PKLVETLIGF--KVIDIACGSGDAQT 4173
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
+ D +++WG ++G+LG G +G K P K++ L V + CG+ + A+
Sbjct: 4174 LCITDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVVKVECGSQFSVALTR--- 4230
Query: 135 NDGTISTSRLWVWGQ----------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
+ ++ WG+ ++ P+ A IIC ++ GS+H VA S+
Sbjct: 4231 ------SGSVYTWGKGDYHRLGHGSDEHVRHPKKI-AALQGKKIIC-IATGSLHCVACSD 4282
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G + WG N+ GQLG G T + PR++ + + I +V+CG HS A S
Sbjct: 4283 LGEVFTWGDNDEGQLGDG-TMNAIHRPRLVVTL--------QGKNINRVACGSAHSLAWS 4333
Query: 245 EN 246
N
Sbjct: 4334 TN 4335
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 130/288 (45%), Gaps = 38/288 (13%)
Query: 107 KVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLW--------VWGQN-------- 150
K + + E ++S A I E + T S S+LW VWG N
Sbjct: 2942 KKRLVNDELPLNVSFLATDYEEIPEVKTLSETSSHSKLWSDSPTKVFVWGLNDKDQLGGL 3001
Query: 151 QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQG 210
+GS + ++ GS + +S G L A G G+LG G + +
Sbjct: 3002 KGSKVKVPVYSESLTALKPIHIAGGSKSLFIVSYDGKLYACGEGTNGRLGLGHS-NNVAT 3060
Query: 211 PRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK 270
P + +++ ++K+ V G H+ A++ +G+V++WG G G+LGH + S D+
Sbjct: 3061 PCQLTSLNQYV-----IKKVA-VHSGGKHAMALTLDGKVFSWGEGEDGKLGHDNRLSLDR 3114
Query: 271 ELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNE 330
P+ + AL I+D+ACG HS A++S G L+ WG + G+LG G N
Sbjct: 3115 ---PKMIEALKSKRIRDIACGSSHSAAISSTGELFTWGLGEYGRLGHG---------DNL 3162
Query: 331 SDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRDGRIHGWGYNSYGQ 376
+ + + L+ + VQ VACG + TL +G + WG +G+
Sbjct: 3163 TQLRPKLVKALLGHHIVQ-VACGSRDAQTLALSAEGLVFSWGDGDFGK 3209
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 101/227 (44%), Gaps = 27/227 (11%)
Query: 190 AWGYNEYGQLGRGITCEGLQGPRV-IKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG N+ QLG GL+G +V + Y++ L K ++ G VS +G+
Sbjct: 2989 VWGLNDKDQLG------GLKGSKVKVPVYSESLTAL----KPIHIAGGSKSLFIVSYDGK 3038
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHSCALTSKGALYA 306
+Y G G+ G+LG L + P ++ +L+ IK VA GG H+ ALT G +++
Sbjct: 3039 LYACGEGTNGRLG---LGHSNNVATPCQLTSLNQYVIKKVAVHSGGKHAMALTLDGKVFS 3095
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRI 366
WG + G+LG SL + ++ ++ +ACG SH+ G +
Sbjct: 3096 WGEGEDGKLG---HDNRLSLDRPKMIEALKS-------KRIRDIACGSSHSAAISSTGEL 3145
Query: 367 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLA 412
WG YG+ + + P V +G + ++A G + LA
Sbjct: 3146 FTWGLGEYGRLGHGDNLTQLRPKLVKALLGHHIVQVACGSRDAQTLA 3192
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 78/189 (41%), Gaps = 32/189 (16%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ Q+ C E ++ G+VY S Q C P ++ DG I +A
Sbjct: 479 VKQIVCAERWLLILTLTGKVYIMYYSSETQ---C----------PEQIEGFDGKEISKLA 525
Query: 290 C--GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
G HS AL+ G +Y+WG G+LG G N S I LV N +
Sbjct: 526 AHADGKHSLALSCDGDVYSWGNGDGGRLGHGD---------NNSRDQPTKITELVGKNVI 576
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV----DWCVGEVRKLAA 403
++CG +++ G ++ WG +YG+ + S P+ V D+ + ++ A
Sbjct: 577 H-ISCGATYSAAVTSSGEVYTWGRGNYGRLGHGTSEDHTVPTLVVGLKDYFIVDI---AC 632
Query: 404 GGGHSAVLA 412
G G + LA
Sbjct: 633 GSGDAQTLA 641
>gi|5823976|emb|CAB54002.1| RPGR protein [Homo sapiens]
gi|119579848|gb|EAW59444.1| retinitis pigmentosa GTPase regulator, isoform CRA_d [Homo sapiens]
Length = 646
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 161/357 (45%), Gaps = 55/357 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIP---KQLPPELFGCPAGANSRWLDIACGHEH 73
+ + +Y++G N+ GQ G G + + P K L PE + ACG H
Sbjct: 50 VTGNNKLYMFGSNNWGQLGL-GSKSAISKPTCVKALKPE----------KVKLAACGRNH 98
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF-VKSISCGAHCTAAIAEP 132
T G ++ G N GQLG G E R + SE +K +S G++ +AA+ E
Sbjct: 99 TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTE- 157
Query: 133 RENDGTISTSRLWVWGQN-QGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECG 186
DG RL++WG N +G + P + + +SCG H ++ G
Sbjct: 158 ---DG-----RLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDG 209
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKG---YAKFLDEAPELEKITQVSCGEYHSAAV 243
L +G E G+LG P + G + + E PE K+ QV+CG H+ +
Sbjct: 210 ELYVFGEPENGKLGL---------PNQLLGNHRTPQLVSEIPE--KVIQVACGGEHTVVL 258
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+EN VYT+GLG GQLG + E P+ + + I ++CG H+ +T G
Sbjct: 259 TENA-VYTFGLGQFGQLGLGTFLFETSE--PKVIENIRDQTISYISCGENHTALITDIGL 315
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+Y +G + G+LGLG + + IP + R I V+LVACG H +V+
Sbjct: 316 MYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFI--------VKLVACGGCHMVVF 364
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 167/360 (46%), Gaps = 36/360 (10%)
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
N + ++CG EH+A V + L+ +G+N +GQLG G++ P VK L+ E VK +
Sbjct: 34 NDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAA 93
Query: 121 CGAHCTAAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVH 178
CG + T E G + +L + + + F + + FT I Q+S GS
Sbjct: 94 CGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISF--FTSEHKIKQLSAGSNT 151
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
AL+E G L WG N GQ+G +V G + ++ +SCG Y
Sbjct: 152 SAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIG-----------KPVSWISCGYY 200
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
HSA V+ +GE+Y +G G+LG + G+ P+ V + I+ VACGG H+ L
Sbjct: 201 HSAFVTTDGELYVFGEPENGKLGLPNQLLGNHR-TPQLVSEIPEKVIQ-VACGGEHTVVL 258
Query: 299 TSKGALYAWGGSQAGQLGLGP---QTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS 355
T + A+Y +G Q GQLGLG +T +I N D + ++CG +
Sbjct: 259 T-ENAVYTFGLGQFGQLGLGTFLFETSEPKVIENIRD------------QTISYISCGEN 305
Query: 356 HTLVYMRDGRIHGWGYNSYGQ--AANEKSTYAWYPSPVDWCVGEVRKLAA-GGGHSAVLA 412
HT + G ++ +G +G+ E T + P+ + + KL A GG H V A
Sbjct: 306 HTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFA 365
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 121/284 (42%), Gaps = 51/284 (17%)
Query: 144 LWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
++ +G+++ N P FW N + +SCG H ++ L +G N +GQLG G
Sbjct: 14 VFTFGKSKFAENNPGKFW---FKNDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLG 70
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
+ + P +K A + EK+ +CG H+ +E G VY G + GQLG
Sbjct: 71 -SKSAISKPTCVK--------ALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLG- 120
Query: 263 CSLQSGDKELLPRRVVALDGIF-----IKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GD E R + F IK ++ G S ALT G L+ WG + GQ+GL
Sbjct: 121 ----LGDTE--ERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGL 174
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQL------VACGHSHTLVYMRDGRIHGWGY 371
+N+ + VP V + ++CG+ H+ DG ++ +G
Sbjct: 175 ------------------KNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVFGE 216
Query: 372 NSYGQAANEKSTYAWYPSP--VDWCVGEVRKLAAGGGHSAVLAD 413
G+ + +P V +V ++A GG H+ VL +
Sbjct: 217 PENGKLGLPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTE 260
>gi|432104195|gb|ELK31017.1| RCC1 and BTB domain-containing protein 2 [Myotis davidii]
Length = 526
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 118/235 (50%), Gaps = 29/235 (12%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H+V + G + WG+N Y QLG G T GL + + + + +V+CG
Sbjct: 86 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN--------KHVIEVACGS 137
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHSC 296
YHS ++ +GEV+ WG + GQ+G S + + +PRRV + L + ++ACG + S
Sbjct: 138 YHSLVLTSDGEVFAWGYNNSGQVGSGSTAN---QPIPRRVTSSLQNKVVVNIACGQMCSM 194
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV--QLVACGH 354
A+ G +Y WG + GQLGLG ++ P + GV Q VACG+
Sbjct: 195 AVVDNGEVYVWGYNGNGQLGLGSSGN-------------QSTPCRLALQGVRVQRVACGY 241
Query: 355 SHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
+HTLV +G+++ WG NSYGQ + YP+PV V + R + HSA
Sbjct: 242 AHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPV--VVEKDRIIEIAACHSA 294
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 114/242 (47%), Gaps = 38/242 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G +P + L +N +++ACG H+ + SDG
Sbjct: 96 VFTWGHNAYSQLG-NGTTNHGLVPCHISTNL------SNKHVIEVACGSYHSLVLTSDGE 148
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKV-KQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P +V LQ++ V +I+CG C+ A+ + E
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTSSLQNKVVVNIACGQMCSMAVVDNGE------- 201
Query: 142 SRLWVWGQNQGSNFPRLFWG-AFTPNTIICQ------VSCGSVHVVALSECGLLQAWGYN 194
++VWG N G TP + Q V+CG H + L++ G + AWG N
Sbjct: 202 --VYVWGYNGNGQLGLGSSGNQSTPCRLALQGVRVQRVACGYAHTLVLTDEGQVYAWGAN 259
Query: 195 EYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVYT 251
YGQLG G + + P V+ E ++I ++ +C H SAA ++ G VY
Sbjct: 260 SYGQLGTGNKSNQSYPTPVVV-----------EKDRIIEIAACHSAHTSAAKTQGGHVYM 308
Query: 252 WG 253
WG
Sbjct: 309 WG 310
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 114/257 (44%), Gaps = 53/257 (20%)
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAHCTAAIAE 131
H ++G +FTWG N + QLG+GT P + L ++ V ++CG++ + +
Sbjct: 86 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKHVIEVACGSYHSLVLT- 144
Query: 132 PRENDGTISTSRLWVWGQNQGSN----------FPRLFWGAFTPNTIICQVSCGSVHVVA 181
+DG + + WG N PR + N ++ ++CG + +A
Sbjct: 145 ---SDGEV-----FAWGYNNSGQVGSGSTANQPIPRRVTSSL-QNKVVVNIACGQMCSMA 195
Query: 182 LSECGLLQAWGYNEYGQLGRGIT------CE-GLQGPRVIKGYAKFLDEAPELEKITQVS 234
+ + G + WGYN GQLG G + C LQG RV +V+
Sbjct: 196 VVDNGEVYVWGYNGNGQLGLGSSGNQSTPCRLALQGVRV-----------------QRVA 238
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG 292
CG H+ +++ G+VY WG S GQLG +G+K + P VV I+ AC
Sbjct: 239 CGYAHTLVLTDEGQVYAWGANSYGQLG-----TGNKSNQSYPTPVVVEKDRIIEIAACHS 293
Query: 293 VH-SCALTSKGALYAWG 308
H S A T G +Y WG
Sbjct: 294 AHTSAAKTQGGHVYMWG 310
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 70/151 (46%), Gaps = 21/151 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G Q P +L A R +ACG+ HT + +G
Sbjct: 202 VYVWGYNGNGQLGLGSSGNQ-STPCRL--------ALQGVRVQRVACGYAHTLVLTDEGQ 252
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
++ WGAN +GQLG G + + +P V + ++ +C AH +AA +
Sbjct: 253 VYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQG--------- 303
Query: 142 SRLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 304 GHVYMWGQCRGQSVVLPHLTHLSCTDDVFAC 334
>gi|62898714|dbj|BAD97211.1| retinitis pigmentosa GTPase regulator variant [Homo sapiens]
Length = 815
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 161/354 (45%), Gaps = 49/354 (13%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIP---KQLPPELFGCPAGANSRWLDIACGHEH 73
+ + +Y++G N+ GQ G G + + P K L PE A CG H
Sbjct: 50 VTGNNKLYMFGSNNWGQLGL-GSKSAISKPTCVKALKPEKVKLAA----------CGRNH 98
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF-VKSISCGAHCTAAIAEP 132
T G ++ G N GQLG G E R + SE +K +S G++ +AA+ E
Sbjct: 99 TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTE- 157
Query: 133 RENDGTISTSRLWVWGQN-QGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECG 186
DG RL++WG N +G + P + + +SCG H ++ G
Sbjct: 158 ---DG-----RLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDG 209
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
L +G E G+LG + + L R + + E PE K+ QV+CG H+ ++EN
Sbjct: 210 ELYVFGEPENGKLG--LPNQLLGNHRT----PQLVSEIPE--KVIQVACGGEHTVVLTEN 261
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
VYT+GLG GQLG + E P+ + + I ++CG H+ +T G +Y
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSE--PKVIENIRDQTISYISCGENHTALITDIGLMYT 318
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+G + G+LGLG + + IP + R I V+LVACG H +V+
Sbjct: 319 FGDGRHGKLGLGLENFTNHFIPTLCSNFLRFI--------VKLVACGGCHMVVF 364
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 179/393 (45%), Gaps = 51/393 (12%)
Query: 43 LRIPKQLPPEL-----FGCPAGA----------NSRWLDIACGHEHTAAVASDGTLFTWG 87
+R P++L P+L FG A N + ++CG EH+A V + L+ +G
Sbjct: 1 MREPEELMPDLGAVFTFGKSKFAENNPGKFWFKNDVPVHLSCGDEHSAVVTGNNKLYMFG 60
Query: 88 ANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE--PRENDGTISTSRLW 145
+N +GQLG G++ P VK L+ E VK +CG + T E G + +L
Sbjct: 61 SNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLG 120
Query: 146 VWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITC 205
+ + + F + + FT I Q+S GS AL+E G L WG N GQ+G
Sbjct: 121 LGDTEERNTFHVISF--FTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVS 178
Query: 206 EGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSL 265
+V G + ++ +SCG YHSA V+ +GE+Y +G G+LG +
Sbjct: 179 NVCVPQQVTIG-----------KPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQ 227
Query: 266 QSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP---QTR 322
G+ P+ V + I+ VACGG H+ LT + A+Y +G Q GQLGLG +T
Sbjct: 228 LLGNHR-TPQLVSEIPEKVIQ-VACGGEHTVVLT-ENAVYTFGLGQFGQLGLGTFLFETS 284
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ--AANE 380
+I N D + ++CG +HT + G ++ +G +G+ E
Sbjct: 285 EPKVIENIRD------------QTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLE 332
Query: 381 KSTYAWYPSPVDWCVGEVRKLAA-GGGHSAVLA 412
T + P+ + + KL A GG H V A
Sbjct: 333 NFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFA 365
>gi|74140640|dbj|BAB27358.3| unnamed protein product [Mus musculus]
Length = 576
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 118/237 (49%), Gaps = 17/237 (7%)
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
VSCG H VA+ G + AWG GQLG G E P IK A KI
Sbjct: 6 VSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGI--------KII 57
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
QVSCG YHS A+SE+G V++WG S GQLG ++ + +P++V +L+GI + VA G
Sbjct: 58 QVSCGHYHSLALSEDGHVFSWGRNSEGQLGLG--KNSRSQAIPQKVKSLEGIPLAQVAAG 115
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVA 351
G HS AL+ G + WG +++GQL L + S +N+ ++ ++
Sbjct: 116 GTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVI-------YIS 168
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
CG+ HT V +G++ +G NS GQ + P ++ G V ++ H+
Sbjct: 169 CGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQIECASYHT 225
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 95/189 (50%), Gaps = 23/189 (12%)
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
VSCG+ HS AV G+V+ WG GS GQLG + + +P ++ AL GI I V+CG
Sbjct: 6 VSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFK--EISFMPTKIKALAGIKIIQVSCGH 63
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVAC 352
HS AL+ G +++WG + GQLGLG +RS IP + + IP+ VA
Sbjct: 64 YHSLALSEDGHVFSWGRNSEGQLGLGKNSRS-QAIPQKVKS-LEGIPL-------AQVAA 114
Query: 353 GHSHTLVYMRDGRIHGWGYNSYGQAA---NEKSTYAWYPSPVDWCVGEVRKLAA-----G 404
G +H+ G GWG N GQ A N+ + P +G ++ L+ G
Sbjct: 115 GGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPH----SIGALKNLSVIYISCG 170
Query: 405 GGHSAVLAD 413
H+AVL +
Sbjct: 171 YEHTAVLTE 179
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 118/269 (43%), Gaps = 40/269 (14%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCGAHC 125
++CG EH+ AV G +F WGA GQLG G +E P K+K L + +SCG +
Sbjct: 6 VSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYH 65
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSN--FPRLFWGAFTPNTI-------ICQVSCGS 176
+ A++E DG + + WG+N + P + + QV+ G
Sbjct: 66 SLALSE----DGHV-----FSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGG 116
Query: 177 VHVVALSECGLLQAWGYNEYGQLGR--GITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
H ALS G WG N GQL E + P I G K L + +S
Sbjct: 117 THSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSI-GALKNLS-------VIYIS 168
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVH 294
CG H+A ++E G+V+T+G S GQL S +SG + P+ + + G + + C H
Sbjct: 169 CGYEHTAVLTEEGQVFTFGGNSSGQL-QPSPRSGQRG--PQLIEGIGG-RVSQIECASYH 224
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRS 323
+ A Y + Q LG GP S
Sbjct: 225 TIA-------YVYTTGQVVSLGRGPSHTS 246
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 116/249 (46%), Gaps = 39/249 (15%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG GQ G G +++ +P ++ A A + + ++CGH H+ A++
Sbjct: 19 KGKVFAWGAGSEGQLGI-GEFKEISF---MPTKI---KALAGIKIIQVSCGHYHSLALSE 71
Query: 80 DGTLFTWGANEFGQLGDG-TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG +F+WG N GQLG G + P+KVK L+ + ++ G + A++ + G
Sbjct: 72 DGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFG- 130
Query: 139 ISTSRLWVWGQNQGSNFP----RLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
WG N+ ++ + P++I + +SCG H L+E G
Sbjct: 131 --------WGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQ 182
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSEN 246
+ +G N GQL + G +GP++I+G +++Q+ C YH+ A V
Sbjct: 183 VFTFGGNSSGQL-QPSPRSGQRGPQLIEGIGG---------RVSQIECASYHTIAYVYTT 232
Query: 247 GEVYTWGLG 255
G+V + G G
Sbjct: 233 GQVVSLGRG 241
>gi|301755358|ref|XP_002913533.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
[Ailuropoda melanoleuca]
Length = 1011
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 123/417 (29%), Positives = 190/417 (45%), Gaps = 61/417 (14%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++CG EHTA V + L+ +G+N +GQLG G++ P VK L+ E VK +CG + T
Sbjct: 50 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSTVNKPTCVKALKPEKVKFAACGRNHT 109
Query: 127 AAIAEPRENDGTISTS------RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVV 180
E G + S +L + ++ ++F + + FT I Q+S GS
Sbjct: 110 LVSTE----GGKVYASGGNNEGQLGLGDTDERNSFHLISF--FTSQRKIKQLSAGSNTSA 163
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
AL+E G L WG N GQ+G +V G + I+ +SCG YHS
Sbjct: 164 ALTEDGELFMWGDNSEGQIGLKNITNVCVPQQVTVG-----------KPISWISCGYYHS 212
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
A V+ GE+YT+G G+LG Q +P+ V + ++ VACGG H+ LT
Sbjct: 213 AFVTTEGELYTFGEPESGKLG-LPKQLLVNHRMPQSVPGIPEKVVQ-VACGGGHTVVLTE 270
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ-----LVACGHS 355
K A+Y +G Q GQLGLG T+ P+ V ++ + CG +
Sbjct: 271 K-AVYTFGLGQFGQLGLG--------------TFLFETPVPKVIEHIKDLKISSIFCGEN 315
Query: 356 HTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV---DWCVGEVRKLAAGGGHSAVLA 412
HT + G ++ +G +G+ + +P ++ V+ +A GG H+ V A
Sbjct: 316 HTALITDLGLMYTFGDGRHGKLGLGLENFTNQFTPTLCSNFLRFIVQLVACGGCHTLVFA 375
Query: 413 -------DACSLKELCEFRLAE--SVTLSNASEIEDVASRTGSEALARLCERLREHS 460
+ L+++ E S+ +SN S +V RT S AR+ R RE S
Sbjct: 376 TPRLSGTEEMELEQINNSYFPETPSLPISNLSS-GNVLHRTLS---ARMRRREREKS 428
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 122/286 (42%), Gaps = 51/286 (17%)
Query: 144 LWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
++ +G+ + N P FW N I +SCG H ++ L +G N +GQLG G
Sbjct: 24 VFTFGKTKFAENIPSKFWFK---NDIPAFLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLG 80
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
+ + P +K A + EK+ +CG H+ +E G+VY G + GQLG
Sbjct: 81 -SKSTVNKPTCVK--------ALKPEKVKFAACGRNHTLVSTEGGKVYASGGNNEGQLGL 131
Query: 263 CSLQSGDKELLPRRVVALDGIF-----IKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GD + R L F IK ++ G S ALT G L+ WG + GQ+GL
Sbjct: 132 -----GDTD--ERNSFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGL 184
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQL------VACGHSHTLVYMRDGRIHGWGY 371
+NI + VP V + ++CG+ H+ +G ++ +G
Sbjct: 185 ------------------KNITNVCVPQQVTVGKPISWISCGYYHSAFVTTEGELYTFGE 226
Query: 372 NSYGQAANEKSTYAWY--PSPVDWCVGEVRKLAAGGGHSAVLADAC 415
G+ K + P V +V ++A GGGH+ VL +
Sbjct: 227 PESGKLGLPKQLLVNHRMPQSVPGIPEKVVQVACGGGHTVVLTEKA 272
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 102/233 (43%), Gaps = 47/233 (20%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+++WG N GQ G K + +P+Q+ G W I+CG+ H+A V ++G
Sbjct: 171 LFMWGDNSEGQIGLKNI-TNVCVPQQV-------TVGKPISW--ISCGYYHSAFVTTEGE 220
Query: 83 LFTWGANEFGQLGDGTEEGRKH--PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
L+T+G E G+LG + H P+ V + + V+ ++CG T + E
Sbjct: 221 LYTFGEPESGKLGLPKQLLVNHRMPQSVPGIPEKVVQ-VACGGGHTVVLTE--------- 270
Query: 141 TSRLWVWGQNQGSNFPRLFWGAF-----TPNTI-------ICQVSCGSVHVVALSECGLL 188
++ +G Q F +L G F P I I + CG H +++ GL+
Sbjct: 271 -KAVYTFGLGQ---FGQLGLGTFLFETPVPKVIEHIKDLKISSIFCGENHTALITDLGLM 326
Query: 189 QAWGYNEYGQLGRGITCEGLQ-GPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
+G +G+LG G+ Q P + + +F+ + V+CG H+
Sbjct: 327 YTFGDGRHGKLGLGLENFTNQFTPTLCSNFLRFI--------VQLVACGGCHT 371
>gi|47226892|emb|CAG05784.1| unnamed protein product [Tetraodon nigroviridis]
Length = 557
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 139/304 (45%), Gaps = 39/304 (12%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ +D ++ G N LG G + P+KV L V S+S G+ +A D
Sbjct: 52 ITADDEVYALGLNCSNCLGTGDSQSSIVPKKVDILSGRKVVSLSYGSGPHILLAT---ED 108
Query: 137 GTISTSRLWVWGQNQGSNF---------PRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
G L+ WG N S + A N + +V+CGS H +AL++ G
Sbjct: 109 G-----ELFAWGHNGYSQLGNGTTNQGVAPVLVSANLLNKKVTEVACGSHHSMALTDSGE 163
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWGYN GQ+G G T RV + + CG+ S AV +NG
Sbjct: 164 VYAWGYNNCGQVGSGSTANQPTPRRV--------SSCLQNRVAVSIVCGQTSSLAVVDNG 215
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
EVY WG GQLG L + +L P R+VAL G+ ++ + G HS ALT +G LYAW
Sbjct: 216 EVYGWGYNGNGQLG---LGNNGNQLTPCRLVALQGLCVQQIVSGYAHSLALTDEGLLYAW 272
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRI 366
G + GQLG G ++ S P + T I V++ AC +HT + G++
Sbjct: 273 GANTYGQLGTGNKSNQLS--PVQIMTEKERI--------VEIAACHSTHTSAAKTQSGQV 322
Query: 367 HGWG 370
+ WG
Sbjct: 323 YMWG 326
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 110/242 (45%), Gaps = 37/242 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G Q P + L N + ++ACG H+ A+ G
Sbjct: 111 LFAWGHNGYSQLG-NGTTNQGVAPVLVSANLL------NKKVTEVACGSHHSMALTDSGE 163
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
++ WG N GQ+G G+ + P +V LQ+ SI CG + A+ + E G
Sbjct: 164 VYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNRVAVSIVCGQTSSLAVVDNGEVYG---- 219
Query: 142 SRLWVWGQN------QGSNFPRLFWGAFTPNTIIC--QVSCGSVHVVALSECGLLQAWGY 193
WG N G+N +L +C Q+ G H +AL++ GLL AWG
Sbjct: 220 -----WGYNGNGQLGLGNNGNQLTPCRLVALQGLCVQQIVSGYAHSLALTDEGLLYAWGA 274
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVYT 251
N YGQLG G L +++ E E+I ++ +C H SAA +++G+VY
Sbjct: 275 NTYGQLGTGNKSNQLSPVQIMT----------EKERIVEIAACHSTHTSAAKTQSGQVYM 324
Query: 252 WG 253
WG
Sbjct: 325 WG 326
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 140/334 (41%), Gaps = 46/334 (13%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G +A I A +Y G N S G G + +PK++ +G L
Sbjct: 41 VFGTSANEAIYITADDEVYALGLNCSNCLG-TGDSQSSIVPKKV-----DILSGRKVVSL 94
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAH 124
G H DG LF WG N + QLG+GT P V L ++ V ++CG+H
Sbjct: 95 SYGSG-PHILLATEDGELFAWGHNGYSQLGNGTTNQGVAPVLVSANLLNKKVTEVACGSH 153
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQ------GSN----FPRLFWGAFTPNTIICQVSC 174
+ A+ + E ++ WG N GS PR N + + C
Sbjct: 154 HSMALTDSGE---------VYAWGYNNCGQVGSGSTANQPTPRRVSSCL-QNRVAVSIVC 203
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G +A+ + G + WGYN GQLG G L R++ A + + Q+
Sbjct: 204 GQTSSLAVVDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLV---------ALQGLCVQQIV 254
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG 292
G HS A+++ G +Y WG + GQLG +G+K +L P +++ ++ AC
Sbjct: 255 SGYAHSLALTDEGLLYAWGANTYGQLG-----TGNKSNQLSPVQIMTEKERIVEIAACHS 309
Query: 293 VH-SCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
H S A T G +Y WG + GQ + P F+
Sbjct: 310 THTSAAKTQSGQVYMWGQCR-GQSIVLPYLTHFA 342
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHSCA 297
H +E+GE++ WG QLG+ + G + P V A L + +VACG HS A
Sbjct: 101 HILLATEDGELFAWGHNGYSQLGNGTTNQG---VAPVLVSANLLNKKVTEVACGSHHSMA 157
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRN-IPILVVPNGVQLVACGHSH 356
LT G +YAWG + GQ+G G + P + +N + + +V CG +
Sbjct: 158 LTDSGEVYAWGYNNCGQVGSGSTANQPT--PRRVSSCLQNRVAVSIV--------CGQTS 207
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLAD 413
+L + +G ++GWGYN GQ + P + G V+++ +G HS L D
Sbjct: 208 SLAVVDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLVALQGLCVQQIVSGYAHSLALTD 265
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 75/170 (44%), Gaps = 27/170 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WGYN +GQ G QL P +L C I G+ H+ A+ +G
Sbjct: 217 VYGWGYNGNGQLGLGNNGNQL-TPCRLVALQGLCVQ-------QIVSGYAHSLALTDEGL 268
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+ WGAN +GQLG G + + P ++ + V+ +C + T+A +
Sbjct: 269 LYAWGANTYGQLGTGNKSNQLSPVQIMTEKERIVEIAACHSTHTSA--------AKTQSG 320
Query: 143 RLWVWGQNQGSN--FPRLFWGAFTPNTIIC---------QVSCGSVHVVA 181
++++WGQ +G + P L A T + C +S G HV+A
Sbjct: 321 QVYMWGQCRGQSIVLPYLTHFACTDDVFACFATPSVMWRLLSVGMAHVLA 370
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 76/175 (43%), Gaps = 21/175 (12%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG-GVHSCALTSK 301
++ + EVY GL LG QS ++P++V L G + ++ G G H T
Sbjct: 52 ITADDEVYALGLNCSNCLGTGDSQSS---IVPKKVDILSGRKVVSLSYGSGPHILLATED 108
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN----GVQLVACGHSHT 357
G L+AWG + QLG G + + P+LV N V VACG H+
Sbjct: 109 GELFAWGHNGYSQLGNGTTNQGVA-------------PVLVSANLLNKKVTEVACGSHHS 155
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
+ G ++ WGYN+ GQ + + P V C+ ++ G ++ LA
Sbjct: 156 MALTDSGEVYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNRVAVSIVCGQTSSLA 210
>gi|145547042|ref|XP_001459203.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427027|emb|CAK91806.1| unnamed protein product [Paramecium tetraurelia]
Length = 560
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 183/423 (43%), Gaps = 77/423 (18%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
+ ++ WG N G+ G +++ PK N I+ G H+ V D
Sbjct: 15 TYLFAWGRNKDGELSI-GNQKKCNAPK-------AVQGLKNQTVQLISSGSNHSGIVTQD 66
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPE--KVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
G LF G+ G+LG +P+ V+ ++ FV ++ G + T +
Sbjct: 67 GQLFICGSALHGKLGFEDANQPSYPKFLLVQAMKGLFVTQVATGDYHTLCL--------- 117
Query: 139 ISTSRLWVWGQNQGSNFPRLFWGAFTPNTI------ICQVSCGSVHVVALSECGLLQAWG 192
+ +++ WG G+ +L A P I I Q+ CG H ALS G L WG
Sbjct: 118 LDNGQVYAWG---GTLHKKLGSKAGKPARIETLKQTIVQIGCGDFHSAALSANGDLYTWG 174
Query: 193 -----YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
YN GQLG G ++ P+++K + I + SCG YH A+ ++G
Sbjct: 175 GGGRDYNR-GQLGHG-HLNDVETPQIVK------------DNIVKFSCGGYHMMALDKDG 220
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRV--------VALDGIF--------IKDVACG 291
E+++WG G G+ G Q LLP++V + +D IF IK+++ G
Sbjct: 221 ELWSWGSGMYGETGQGEFQD---SLLPKKVKINFNQKHIIIDDIFVQNKQESTIKEISLG 277
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVA 351
G HS L++KG +YA G +Q GQLG+ E+ F+ + I + + +A
Sbjct: 278 GHHSLLLSNKGIVYACGYAQHGQLGIK---------ATENQNKFQ-LVIGISGKTIVQIA 327
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQ-AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAV 410
G +H++V ++ G+N GQ + + Y +++L AGG HS
Sbjct: 328 AGWNHSIVLTSHSDVYTCGHNQAGQLGVGDYESRTQYTRINFLEQRRIKQLFAGGNHSWA 387
Query: 411 LAD 413
L D
Sbjct: 388 LID 390
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 153/344 (44%), Gaps = 49/344 (14%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+A G HT + +G ++ WG +LG ++ G+ P +++ L+ V+ I CG +
Sbjct: 107 VATGDYHTLCLLDNGQVYAWGGTLHKKLG--SKAGK--PARIETLKQTIVQ-IGCGDFHS 161
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG------AFTPNTI---ICQVSCGSV 177
AA++ + L+ WG G ++ R G TP + I + SCG
Sbjct: 162 AALS---------ANGDLYTWGGG-GRDYNRGQLGHGHLNDVETPQIVKDNIVKFSCGGY 211
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAK--------FLDEAPELEK 229
H++AL + G L +WG YG+ G+G + L +V + + F+ E
Sbjct: 212 HMMALDKDGELWSWGSGMYGETGQGEFQDSLLPKKVKINFNQKHIIIDDIFVQNKQE-ST 270
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
I ++S G +HS +S G VY G GQLG + ++ +K L V+ + G I +A
Sbjct: 271 IKEISLGGHHSLLLSNKGIVYACGYAQHGQLGIKATENQNKFQL---VIGISGKTIVQIA 327
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
G HS LTS +Y G +QAGQLG+G ES T + I L QL
Sbjct: 328 AGWNHSIVLTSHSDVYTCGHNQAGQLGVGDY---------ESRTQYTRINFLEQRRIKQL 378
Query: 350 VACG-HSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVD 392
A G HS L+ RI + S NE+ + P+D
Sbjct: 379 FAGGNHSWALIDYNQPRIDDYSPPS---PLNEEVKIENFTQPLD 419
>gi|4506581|ref|NP_000319.1| X-linked retinitis pigmentosa GTPase regulator isoform A [Homo
sapiens]
gi|1314871|gb|AAC50481.1| retinitis pigmentosa GTPase regulator [Homo sapiens]
gi|2204218|emb|CAA66258.1| XLRP3 [Homo sapiens]
gi|119579845|gb|EAW59441.1| retinitis pigmentosa GTPase regulator, isoform CRA_a [Homo sapiens]
Length = 815
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 161/354 (45%), Gaps = 49/354 (13%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIP---KQLPPELFGCPAGANSRWLDIACGHEH 73
+ + +Y++G N+ GQ G G + + P K L PE A CG H
Sbjct: 50 VTGNNKLYMFGSNNWGQLGL-GSKSAISKPTCVKALKPEKVKLAA----------CGRNH 98
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF-VKSISCGAHCTAAIAEP 132
T G ++ G N GQLG G E R + SE +K +S G++ +AA+ E
Sbjct: 99 TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTE- 157
Query: 133 RENDGTISTSRLWVWGQN-QGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECG 186
DG RL++WG N +G + P + + +SCG H ++ G
Sbjct: 158 ---DG-----RLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDG 209
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
L +G E G+LG + + L R + + E PE K+ QV+CG H+ ++EN
Sbjct: 210 ELYVFGEPENGKLG--LPNQLLGNHRT----PQLVSEIPE--KVIQVACGGEHTVVLTEN 261
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
VYT+GLG GQLG + E P+ + + I ++CG H+ +T G +Y
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSE--PKVIENIRDQTISYISCGENHTALITDIGLMYT 318
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+G + G+LGLG + + IP + R I V+LVACG H +V+
Sbjct: 319 FGDGRHGKLGLGLENFTNHFIPTLCSNFLRFI--------VKLVACGGCHMVVF 364
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 167/360 (46%), Gaps = 36/360 (10%)
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
N + ++CG EH+A V + L+ +G+N +GQLG G++ P VK L+ E VK +
Sbjct: 34 NDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAA 93
Query: 121 CGAHCTAAIAE--PRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVH 178
CG + T E G + +L + + + F + + FT I Q+S GS
Sbjct: 94 CGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISF--FTSEHKIKQLSAGSNT 151
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
AL+E G L WG N GQ+G +V G + ++ +SCG Y
Sbjct: 152 SAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIG-----------KPVSWISCGYY 200
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
HSA V+ +GE+Y +G G+LG + G+ P+ V + I+ VACGG H+ L
Sbjct: 201 HSAFVTTDGELYVFGEPENGKLGLPNQLLGNHR-TPQLVSEIPEKVIQ-VACGGEHTVVL 258
Query: 299 TSKGALYAWGGSQAGQLGLGP---QTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS 355
T + A+Y +G Q GQLGLG +T +I N D + ++CG +
Sbjct: 259 T-ENAVYTFGLGQFGQLGLGTFLFETSEPKVIENIRD------------QTISYISCGEN 305
Query: 356 HTLVYMRDGRIHGWGYNSYGQ--AANEKSTYAWYPSPVDWCVGEVRKLAA-GGGHSAVLA 412
HT + G ++ +G +G+ E T + P+ + + KL A GG H V A
Sbjct: 306 HTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFA 365
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 121/284 (42%), Gaps = 51/284 (17%)
Query: 144 LWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
++ +G+++ N P FW N + +SCG H ++ L +G N +GQLG G
Sbjct: 14 VFTFGKSKFAENNPGKFWFK---NDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLG 70
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
+ + P +K A + EK+ +CG H+ +E G VY G + GQLG
Sbjct: 71 -SKSAISKPTCVK--------ALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLG- 120
Query: 263 CSLQSGDKELLPRRVVALDGIF-----IKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GD E R + F IK ++ G S ALT G L+ WG + GQ+GL
Sbjct: 121 ----LGDTE--ERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGL 174
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQL------VACGHSHTLVYMRDGRIHGWGY 371
+N+ + VP V + ++CG+ H+ DG ++ +G
Sbjct: 175 ------------------KNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVFGE 216
Query: 372 NSYGQAANEKSTYAWYPSP--VDWCVGEVRKLAAGGGHSAVLAD 413
G+ + +P V +V ++A GG H+ VL +
Sbjct: 217 PENGKLGLPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTE 260
>gi|148672794|gb|EDL04741.1| mCG16651 [Mus musculus]
Length = 462
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 118/237 (49%), Gaps = 17/237 (7%)
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
VSCG H VA+ G + AWG GQLG G E P IK A KI
Sbjct: 79 VSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGI--------KII 130
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
QVSCG YHS A+SE+G V++WG S GQLG ++ + +P++V +L+GI + VA G
Sbjct: 131 QVSCGHYHSLALSEDGHVFSWGRNSEGQLGLG--KNSRSQAIPQKVKSLEGIPLAQVAAG 188
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVA 351
G HS AL+ G + WG +++GQL L + S +N+ ++ ++
Sbjct: 189 GTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVI-------YIS 241
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
CG+ HT V +G++ +G NS GQ + P ++ G V ++ H+
Sbjct: 242 CGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQIECASYHT 298
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 125/269 (46%), Gaps = 32/269 (11%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
L A G H+ + S+ +++ G N +GQLG ++ + PE ++ L V +SCG
Sbjct: 25 LQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKE 84
Query: 125 CTAAIAEPRENDGTISTSRLWVWG-----QNQGSNFPRLFWGAFTPNTI-------ICQV 172
+ A+ +++ WG Q F + +F P I I QV
Sbjct: 85 HSVAVCHK---------GKVFAWGAGSEGQLGIGEFKEI---SFMPTKIKALAGIKIIQV 132
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
SCG H +ALSE G + +WG N GQLG G P+ +K L+ P + Q
Sbjct: 133 SCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKS----LEGIP----LAQ 184
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
V+ G HS A+S G + WG GQL + ++ P + AL + + ++CG
Sbjct: 185 VAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGY 244
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQT 321
H+ LT +G ++ +GG+ +GQL P++
Sbjct: 245 EHTAVLTEEGQVFTFGGNSSGQLQPSPRS 273
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 122/266 (45%), Gaps = 25/266 (9%)
Query: 152 GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
GS PR A T + Q + G H + L + + G N +GQLG+ + + P
Sbjct: 8 GSRKPRRL-KAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRD-QSTERP 65
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
I+ + VSCG+ HS AV G+V+ WG GS GQLG + +
Sbjct: 66 EPIQALNDL--------HVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFK--EIS 115
Query: 272 LLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNES 331
+P ++ AL GI I V+CG HS AL+ G +++WG + GQLGLG +RS IP +
Sbjct: 116 FMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRS-QAIPQKV 174
Query: 332 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA---NEKSTYAWYP 388
+ IP+ VA G +H+ G GWG N GQ A N+ + P
Sbjct: 175 KS-LEGIPL-------AQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKP 226
Query: 389 SPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ V ++ G H+AVL +
Sbjct: 227 HSIGALKNLSVIYISCGYEHTAVLTE 252
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 116/249 (46%), Gaps = 39/249 (15%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG GQ G G +++ +P ++ A A + + ++CGH H+ A++
Sbjct: 92 KGKVFAWGAGSEGQLG-IGEFKEISF---MPTKI---KALAGIKIIQVSCGHYHSLALSE 144
Query: 80 DGTLFTWGANEFGQLGDG-TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG +F+WG N GQLG G + P+KVK L+ + ++ G + A++ + G
Sbjct: 145 DGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFG- 203
Query: 139 ISTSRLWVWGQNQGSNFP----RLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
WG N+ ++ + P++I + +SCG H L+E G
Sbjct: 204 --------WGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQ 255
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSEN 246
+ +G N GQL + G +GP++I+G +++Q+ C YH+ A V
Sbjct: 256 VFTFGGNSSGQL-QPSPRSGQRGPQLIEGIGG---------RVSQIECASYHTIAYVYTT 305
Query: 247 GEVYTWGLG 255
G+V + G G
Sbjct: 306 GQVVSLGRG 314
>gi|18073943|emb|CAC86116.1| retinitis pigmentosa GTPase regulator [Homo sapiens]
Length = 815
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 161/354 (45%), Gaps = 49/354 (13%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIP---KQLPPELFGCPAGANSRWLDIACGHEH 73
+ + +Y++G N+ GQ G G + + P K L PE A CG H
Sbjct: 50 VTGNNKLYMFGSNNWGQLGL-GSKSAISKPTCVKALKPEKVKLAA----------CGRNH 98
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF-VKSISCGAHCTAAIAEP 132
T G ++ G N GQLG G E R + SE +K +S G++ +AA+ E
Sbjct: 99 TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTE- 157
Query: 133 RENDGTISTSRLWVWGQN-QGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECG 186
DG RL++WG N +G + P + + +SCG H ++ G
Sbjct: 158 ---DG-----RLFMWGDNSEGQIGLKNVSNVCVPQQVTIGNPVSWISCGYYHSAFVTTDG 209
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
L +G E G+LG + + L R + + E PE K+ QV+CG H+ ++EN
Sbjct: 210 ELYVFGEPENGKLG--LPNQLLGNHRT----PQLVSEIPE--KVIQVACGGEHTVVLTEN 261
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
VYT+GLG GQLG + E P+ + + I ++CG H+ +T G +Y
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSE--PKVIENIRDQTISYISCGENHTALITDIGLMYT 318
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+G + G+LGLG + + IP + R I V+LVACG H +V+
Sbjct: 319 FGDGRHGKLGLGLENFTNHFIPTLCSNFLRFI--------VKLVACGGCHMVVF 364
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 166/360 (46%), Gaps = 36/360 (10%)
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
N + ++CG EH+A V + L+ +G+N +GQLG G++ P VK L+ E VK +
Sbjct: 34 NDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAA 93
Query: 121 CGAHCTAAIAE--PRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVH 178
CG + T E G + +L + + + F + + FT I Q+S GS
Sbjct: 94 CGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISF--FTSEHKIKQLSAGSNT 151
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
AL+E G L WG N GQ+G +V G ++ +SCG Y
Sbjct: 152 SAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGNP-----------VSWISCGYY 200
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
HSA V+ +GE+Y +G G+LG + G+ P+ V + I+ VACGG H+ L
Sbjct: 201 HSAFVTTDGELYVFGEPENGKLGLPNQLLGNHR-TPQLVSEIPEKVIQ-VACGGEHTVVL 258
Query: 299 TSKGALYAWGGSQAGQLGLGP---QTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS 355
T + A+Y +G Q GQLGLG +T +I N D + ++CG +
Sbjct: 259 T-ENAVYTFGLGQFGQLGLGTFLFETSEPKVIENIRD------------QTISYISCGEN 305
Query: 356 HTLVYMRDGRIHGWGYNSYGQ--AANEKSTYAWYPSPVDWCVGEVRKLAA-GGGHSAVLA 412
HT + G ++ +G +G+ E T + P+ + + KL A GG H V A
Sbjct: 306 HTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFA 365
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 122/278 (43%), Gaps = 39/278 (14%)
Query: 144 LWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
++ +G+++ N P FW N + +SCG H ++ L +G N +GQLG G
Sbjct: 14 VFTFGKSKFAENNPGKFWFK---NDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLG 70
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
+ + P +K A + EK+ +CG H+ +E G VY G + GQLG
Sbjct: 71 -SKSAISKPTCVK--------ALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLG- 120
Query: 263 CSLQSGDKELLPRRVVALDGIF-----IKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GD E R + F IK ++ G S ALT G L+ WG + GQ+GL
Sbjct: 121 ----LGDTE--ERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGL 174
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+ S +P + + + N V ++CG+ H+ DG ++ +G G+
Sbjct: 175 --KNVSNVCVPQQ----------VTIGNPVSWISCGYYHSAFVTTDGELYVFGEPENGKL 222
Query: 378 ANEKSTYAWYPSP--VDWCVGEVRKLAAGGGHSAVLAD 413
+ +P V +V ++A GG H+ VL +
Sbjct: 223 GLPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTE 260
>gi|449280356|gb|EMC87683.1| RCC1 and BTB domain-containing protein 1 [Columba livia]
Length = 531
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 150/369 (40%), Gaps = 87/369 (23%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G +A I ++V+G N S G G + +PK+L G L
Sbjct: 26 VFGTSANEAIYITHNDEVFVFGLNCSNCLG-TGDNQSTIVPKKLEA-----LCGKKISSL 79
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
G H DG ++ WG N + QLG+GT P +V C
Sbjct: 80 SYGSG-PHVVLCTEDGEVYAWGHNGYSQLGNGTTNQGITPVQV----------------C 122
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
T + + + +V+CGS H +ALS
Sbjct: 123 TNLLIKK------------------------------------VVEVACGSHHSMALSFD 146
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G L AWGYN GQ+G G T RV + + + ++CG+ S AV
Sbjct: 147 GDLYAWGYNNCGQVGSGSTANQPTPRRV--------SNCLQGKMVVGIACGQTSSMAVVS 198
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
NGEVY WG GQLG L + +L P RV AL G+ I +ACG H+ ALT +G LY
Sbjct: 199 NGEVYGWGYNGNGQLG---LGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLY 255
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG---VQLVACGHSHT-LVYM 361
AWG + GQLG G ++ S P+ ++ V++ AC +HT
Sbjct: 256 AWGANTYGQLGTGNKSNQLS-------------PVQIMMEKERVVEIAACHSAHTSAAKT 302
Query: 362 RDGRIHGWG 370
+ G+++ WG
Sbjct: 303 QSGQVYMWG 311
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 117/236 (49%), Gaps = 30/236 (12%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HVV +E G + AWG+N Y QLG G T +G+ +V ++K+ +V+CG
Sbjct: 86 HVVLCTEDGEVYAWGHNGYSQLGNGTTNQGITPVQVCTNLL--------IKKVVEVACGS 137
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHSC 296
+HS A+S +G++Y WG + GQ+G S + PRRV L G + +ACG S
Sbjct: 138 HHSMALSFDGDLYAWGYNNCGQVGS---GSTANQPTPRRVSNCLQGKMVVGIACGQTSSM 194
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQL--VACG 353
A+ S G +Y WG + GQLGLG + P V +GV + +ACG
Sbjct: 195 AVVSNGEVYGWGYNGNGQLGLGNNGNQLT-------------PCRVAALHGVCILQIACG 241
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
++HTL +G ++ WG N+YGQ + SPV + + R + HSA
Sbjct: 242 YAHTLALTDEGLLYAWGANTYGQLGTGNKSNQL--SPVQIMMEKERVVEIAACHSA 295
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 20/157 (12%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y WGYN +GQ G QL P ++ C L IACG+ HT A
Sbjct: 196 VVSNGEVYGWGYNGNGQLGLGNNGNQLT-PCRVAALHGVCI-------LQIACGYAHTLA 247
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPREN 135
+ +G L+ WGAN +GQLG G + + P ++ + V+ +C AH +AA +
Sbjct: 248 LTDEGLLYAWGANTYGQLGTGNKSNQLSPVQIMMEKERVVEIAACHSAHTSAAKTQ---- 303
Query: 136 DGTISTSRLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+ ++++WGQ +G + P L A T + C
Sbjct: 304 -----SGQVYMWGQCRGQSVILPHLTHFACTDDVFAC 335
>gi|60097906|ref|NP_080268.1| E3 ISG15--protein ligase Herc6 [Mus musculus]
gi|403399416|sp|F2Z461.1|HERC6_MOUSE RecName: Full=E3 ISG15--protein ligase Herc6
Length = 1003
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 118/237 (49%), Gaps = 17/237 (7%)
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
VSCG H VA+ G + AWG GQLG G E P IK A KI
Sbjct: 79 VSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGI--------KII 130
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
QVSCG YHS A+SE+G V++WG S GQLG ++ + +P++V +L+GI + VA G
Sbjct: 131 QVSCGHYHSLALSEDGHVFSWGRNSEGQLGLG--KNSRSQAIPQKVKSLEGIPLAQVAAG 188
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVA 351
G HS AL+ G + WG +++GQL L + S +N+ ++ + +
Sbjct: 189 GTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYI-------S 241
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
CG+ HT V +G++ +G NS GQ + P ++ G V ++ H+
Sbjct: 242 CGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQIECASYHT 298
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 125/269 (46%), Gaps = 32/269 (11%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
L A G H+ + S+ +++ G N +GQLG ++ + PE ++ L V +SCG
Sbjct: 25 LQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKE 84
Query: 125 CTAAIAEPRENDGTISTSRLWVWG-----QNQGSNFPRLFWGAFTPNTI-------ICQV 172
+ A+ +++ WG Q F + +F P I I QV
Sbjct: 85 HSVAVCH---------KGKVFAWGAGSEGQLGIGEFKEI---SFMPTKIKALAGIKIIQV 132
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
SCG H +ALSE G + +WG N GQLG G P+ +K L+ P + Q
Sbjct: 133 SCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKS----LEGIP----LAQ 184
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
V+ G HS A+S G + WG GQL + ++ P + AL + + ++CG
Sbjct: 185 VAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGY 244
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQT 321
H+ LT +G ++ +GG+ +GQL P++
Sbjct: 245 EHTAVLTEEGQVFTFGGNSSGQLQPSPRS 273
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 124/270 (45%), Gaps = 33/270 (12%)
Query: 152 GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
GS PR A T + Q + G H + L + + G N +GQLG+ + + P
Sbjct: 8 GSRKPRRL-KAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQR-RDQSTERP 65
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
I+ + VSCG+ HS AV G+V+ WG GS GQLG + +
Sbjct: 66 EPIQALNDL--------HVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFK--EIS 115
Query: 272 LLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNES 331
+P ++ AL GI I V+CG HS AL+ G +++WG + GQLGLG +RS IP +
Sbjct: 116 FMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRS-QAIPQKV 174
Query: 332 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA---NEKSTYAWYP 388
+ IP+ VA G +H+ G GWG N GQ A N+ + P
Sbjct: 175 KS-LEGIPL-------AQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKP 226
Query: 389 SPVDWCVGEVRKLAA-----GGGHSAVLAD 413
+G ++ L+ G H+AVL +
Sbjct: 227 H----SIGALKNLSVIYISCGYEHTAVLTE 252
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 115/249 (46%), Gaps = 39/249 (15%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG GQ G G +++ +P ++ A A + + ++CGH H+ A++
Sbjct: 92 KGKVFAWGAGSEGQLG-IGEFKEISF---MPTKI---KALAGIKIIQVSCGHYHSLALSE 144
Query: 80 DGTLFTWGANEFGQLGDG-TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG +F+WG N GQLG G + P+KVK L+ + ++ G + A++ + G
Sbjct: 145 DGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFG- 203
Query: 139 ISTSRLWVWGQNQGSNFP----RLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
WG N+ ++ + P++I + +SCG H L+E G
Sbjct: 204 --------WGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQ 255
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSEN 246
+ +G N GQL G +GP++I+G +++Q+ C YH+ A V
Sbjct: 256 VFTFGGNSSGQLQPS-PRSGQRGPQLIEGIGG---------RVSQIECASYHTIAYVYTT 305
Query: 247 GEVYTWGLG 255
G+V + G G
Sbjct: 306 GQVVSLGRG 314
>gi|66817532|ref|XP_642619.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60470703|gb|EAL68677.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 849
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 119/482 (24%), Positives = 204/482 (42%), Gaps = 68/482 (14%)
Query: 23 IYVWGYNHSGQTG----RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
+Y WG + GQ G G ++ + + K P L + + R + +ACG+ H+ A+
Sbjct: 55 VYSWGRSKEGQLGIGQGYGGSDKVMFVAK---PTL--IKSLQHERIIKVACGNFHSLALT 109
Query: 79 SDGTLFTWGANEFGQLGDG------------TEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
G ++ WG + +L + E R +++ + S A+
Sbjct: 110 DMGKVYEWG--QLHRLDESQSSLDIQSTNGLIEMPRLSSQRIIEASVSQYLSGEKKAYDA 167
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLF-WGAFTPNTI------ICQVSCGSVHV 179
+P+++D S Q++ + ++ P I + VS G
Sbjct: 168 NGGTKPKDDDEDKEASN---SAQSKSKHLGKIIDLNQTIPMQIQDIPEEVVDVSGGWAFS 224
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK------ITQV 233
A+++ G L WG+NE GQLG G ++ P+L K I V
Sbjct: 225 AAVTKSGRLYTWGFNEKGQLGLG---------------NRWFHSTPQLVKTLIDVNIVSV 269
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI--FIKDVACG 291
CG H A+++ GEVY+WGLG GQLGH +++S L P+++ + I VACG
Sbjct: 270 VCGRQHICAITDQGEVYSWGLGVFGQLGHGNVKS---YLHPKKIQQFVELNERIAQVACG 326
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFR-NIPILVV---PNGV 347
+ + +G LYA+G + GQLG +T+ D +F+ +IPI+V +
Sbjct: 327 SNFTMVRSVQGLLYAFGHGEYGQLGSTEETQHLDF--GGRDNHFKYSIPIVVKSLETKKI 384
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGG 406
+ VACGH HT+V + ++ WG+ S G + P + G E+ + AG
Sbjct: 385 KNVACGHLHTIVVTDENEVYQWGWGSSGALGLGNKRFQLVPQLITSLSGEEIASITAGEK 444
Query: 407 HSAVL--ADACSLKELCEFRLAESVTLSNASEIEDVASRTGSEALARLCERLREHSLHGD 464
H+ V+ +D S + + E +++D + S + C++L L
Sbjct: 445 HTIVVRCSDVTSFAYDYKSLINEKKYADLIFKVQDKKIYSHSLFIKSRCQKLYSIILFSS 504
Query: 465 EF 466
F
Sbjct: 505 RF 506
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 163/387 (42%), Gaps = 58/387 (14%)
Query: 63 RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEG-------RKHPEKVKQLQSEF 115
R + G H+ AV+ G +++WG ++ GQLG G G P +K LQ E
Sbjct: 35 RIIQTVSGEAHSLAVSRFGDVYSWGRSKEGQLGIGQGYGGSDKVMFVAKPTLIKSLQHER 94
Query: 116 VKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCG 175
+ ++CG + A+ + +++ WGQ + + + N +I
Sbjct: 95 IIKVACGNFHSLALTD---------MGKVYEWGQLHRLDESQSSLDIQSTNGLIEMPRLS 145
Query: 176 SVHVVALSECGLL--QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL------ 227
S ++ S L + Y+ G E + + +K L + +L
Sbjct: 146 SQRIIEASVSQYLSGEKKAYDANGGTKPKDDDEDKEASNSAQSKSKHLGKIIDLNQTIPM 205
Query: 228 ------EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVA 279
E++ VS G SAAV+++G +YTWG GQLG G++ P+ V
Sbjct: 206 QIQDIPEEVVDVSGGWAFSAAVTKSGRLYTWGFNEKGQLG-----LGNRWFHSTPQLVKT 260
Query: 280 LDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIP 339
L + I V CG H CA+T +G +Y+WG GQLG G +S+ L P + +
Sbjct: 261 LIDVNIVSVVCGRQHICAITDQGEVYSWGLGVFGQLGHG-NVKSY-LHPKKIQQFVE--- 315
Query: 340 ILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKST----------YAWYPS 389
+ + VACG + T+V G ++ +G+ YGQ + + T + Y
Sbjct: 316 ---LNERIAQVACGSNFTMVRSVQGLLYAFGHGEYGQLGSTEETQHLDFGGRDNHFKYSI 372
Query: 390 PVDWCVGEVRKL---AAGGGHSAVLAD 413
P+ E +K+ A G H+ V+ D
Sbjct: 373 PIVVKSLETKKIKNVACGHLHTIVVTD 399
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 60/121 (49%), Gaps = 13/121 (10%)
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G ++ GQLG E L+ P VI+G ++I Q GE HS AVS G+VY+
Sbjct: 7 GQSKNGQLGHDSIKECLE-PTVIEGLLG--------KRIIQTVSGEAHSLAVSRFGDVYS 57
Query: 252 WGLGSVGQLGHCSLQSGDKELL----PRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
WG GQLG G +++ P + +L I VACG HS ALT G +Y W
Sbjct: 58 WGRSKEGQLGIGQGYGGSDKVMFVAKPTLIKSLQHERIIKVACGNFHSLALTDMGKVYEW 117
Query: 308 G 308
G
Sbjct: 118 G 118
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 56/125 (44%), Gaps = 12/125 (9%)
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
V + G GQLGH S++ L P + L G I G HS A++ G +Y+WG
Sbjct: 3 VLSVGQSKNGQLGHDSIKEC---LEPTVIEGLLGKRIIQTVSGEAHSLAVSRFGDVYSWG 59
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRDGR 365
S+ GQLG+G F P L+ + VACG+ H+L G+
Sbjct: 60 RSKEGQLGIGQGY------GGSDKVMFVAKPTLIKSLQHERIIKVACGNFHSLALTDMGK 113
Query: 366 IHGWG 370
++ WG
Sbjct: 114 VYEWG 118
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 7/136 (5%)
Query: 1 MDINEIIGETARPVDNIPAKSA---IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCP 57
+++NE I + A + +S +Y +G+ GQ G + L + + P
Sbjct: 314 VELNERIAQVACGSNFTMVRSVQGLLYAFGHGEYGQLGSTEETQHLDFGGRDNHFKYSIP 373
Query: 58 AGANS----RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS 113
S + ++ACGH HT V + ++ WG G LG G + + P+ + L
Sbjct: 374 IVVKSLETKKIKNVACGHLHTIVVTDENEVYQWGWGSSGALGLGNKRFQLVPQLITSLSG 433
Query: 114 EFVKSISCGAHCTAAI 129
E + SI+ G T +
Sbjct: 434 EEIASITAGEKHTIVV 449
>gi|405972531|gb|EKC37295.1| X-linked retinitis pigmentosa GTPase regulator [Crassostrea gigas]
Length = 663
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 168/359 (46%), Gaps = 51/359 (14%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ACG EHTA V G LFT+G N++GQLG + P VK+L+ E VK ++CG T
Sbjct: 41 VACGDEHTALVTESGRLFTFGVNDWGQLGIDEVKVSTRPCCVKKLKPEKVKVVACGRIHT 100
Query: 127 AAIAEPRENDGTISTSRLWVWGQN-QGSNFPRLFWGAFTPNTIICQ------VSCGSVHV 179
E + L+ +G N G + P + C+ ++ G+ H
Sbjct: 101 IVATE---------SGCLYTFGANGDGQLGVEDIPSSNCPVKVECEPRQYKALAAGADHS 151
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
VAL++ G L WG GQLG G + P ++ K+ V+CG YH
Sbjct: 152 VALTDDGELYVWGGGSEGQLGLG-DIDDKSTPTLLSTD----------NKVISVACGYYH 200
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGD--KELLPRRVVALDGIFIKDVACGGVHSCA 297
+A V++ GEV+T+G G G+LG Q D K + P++V + K VACGG H+
Sbjct: 201 TAFVTDVGEVFTFGEGDGGKLG----QGTDYGKAVAPKKVNIPEK--AKSVACGGSHTVV 254
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI-LVVPNGVQLVACGHSH 356
LT G +Y +G GQLG +++ ++ P+ L + V +A G +H
Sbjct: 255 LTECGKVYTFGEGGNGQLG------------HKNKYFYCETPVWLNFKHKVTQIAAGENH 302
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYA--WYPSPVD-WCVGEVRKLAAGGGHSAVLA 412
T + G+++ +G + + + Y+ ++P + V +++ GG H VLA
Sbjct: 303 TALVTEKGQLYTFGDGRHAKLGLDHECYSNQYFPQRSKRFSKFIVTQVSCGGCHMIVLA 361
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 32/209 (15%)
Query: 216 GYAKFLDEAPEL-----EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK 270
G ++F D P +K V+CG+ H+A V+E+G ++T+G+ GQLG ++ +
Sbjct: 19 GKSRFGDNLPNKFWVRGDKAKSVACGDEHTALVTESGRLFTFGVNDWGQLGIDEVKVSTR 78
Query: 271 ELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNE 330
P V L +K VACG +H+ T G LY +G + GQLG+
Sbjct: 79 ---PCCVKKLKPEKVKVVACGRIHTIVATESGCLYTFGANGDGQLGV------------- 122
Query: 331 SDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA----NEKSTY 384
D N P+ V P + +A G H++ DG ++ WG S GQ ++KST
Sbjct: 123 EDIPSSNCPVKVECEPRQYKALAAGADHSVALTDDGELYVWGGGSEGQLGLGDIDDKSTP 182
Query: 385 AWYPSPVDWCVGEVRKLAAGGGHSAVLAD 413
+ +V +A G H+A + D
Sbjct: 183 TLLSTD-----NKVISVACGYYHTAFVTD 206
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 108/240 (45%), Gaps = 42/240 (17%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG GQ G I + P L +++ + +ACG+ HTA V G
Sbjct: 160 LYVWGGGSEGQLGLGD------IDDKSTPTLLS----TDNKVISVACGYYHTAFVTDVGE 209
Query: 83 LFTWGANEFGQLGDGTEEGRK-HPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+FT+G + G+LG GT+ G+ P+KV E KS++CG T + E
Sbjct: 210 VFTFGEGDGGKLGQGTDYGKAVAPKKVN--IPEKAKSVACGGSHTVVLTE---------C 258
Query: 142 SRLWVWGQ--NQGSNFPRLFWGAFTP-----NTIICQVSCGSVHVVALSECGLLQAWGYN 194
+++ +G+ N ++ TP + Q++ G H ++E G L +G
Sbjct: 259 GKVYTFGEGGNGQLGHKNKYFYCETPVWLNFKHKVTQIAAGENHTALVTEKGQLYTFGDG 318
Query: 195 EYGQLGRGITCEGLQ-GPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS----ENGEV 249
+ +LG C Q P+ K ++KF+ +TQVSCG H ++ +NGEV
Sbjct: 319 RHAKLGLDHECYSNQYFPQRSKRFSKFI--------VTQVSCGGCHMIVLAYPRLQNGEV 370
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 25/172 (14%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
+ E+G ++T+G G + LP + + G K VACG H+ +T G
Sbjct: 9 IPESGAIFTFGKSRFG------------DNLPNKFW-VRGDKAKSVACGDEHTALVTESG 55
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV-PNGVQLVACGHSHTLVYM 361
L+ +G + GQLG+ +E R + + P V++VACG HT+V
Sbjct: 56 RLFTFGVNDWGQLGI-----------DEVKVSTRPCCVKKLKPEKVKVVACGRIHTIVAT 104
Query: 362 RDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLAD 413
G ++ +G N GQ E + P V+ + + LAAG HS L D
Sbjct: 105 ESGCLYTFGANGDGQLGVEDIPSSNCPVKVECEPRQYKALAAGADHSVALTD 156
>gi|297832882|ref|XP_002884323.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297330163|gb|EFH60582.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 393
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 155/361 (42%), Gaps = 55/361 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N G G + IP ++ A AN + A G H AV G
Sbjct: 59 MFTWGWNQRGTLGHPPETKTENIPSRVK-------ALANVKITQAAIGGWHCLAVDDQGR 111
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ WG NE+GQ G EE K E + ++ + V C T + T
Sbjct: 112 AYAWGGNEYGQCG---EEPLKD-EMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTR 167
Query: 143 R--LWVWGQNQGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECGLLQAWGYNE 195
+W WGQ + F P + + ++ G+ H +AL E G L AWG NE
Sbjct: 168 EGHVWTWGQPWPPGDIKQI---FVPVRVQGLENVSIIAVGAFHNLALEEDGRLLAWGNNE 224
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
YGQLG G T + P + G LD+ + ++ G +HS A+++ GEVY WG G
Sbjct: 225 YGQLGTGDT-QPTSHPVPVHG----LDDL----TLVDIAAGGWHSTALTDKGEVYGWGRG 275
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
G+LG K ++P++V L I V+CGG HS ALT G ++++G G+L
Sbjct: 276 EHGRLGFGDNDKSSK-MVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRL 334
Query: 316 GLGPQTRSFSLIPNESDTYFRNIPILVVPN---------------GVQLVACGHSHTLVY 360
G G + + + +PI++ P + +ACG HTL
Sbjct: 335 GYGRKVTTGQPL---------ELPIMIPPPEGSFNHADEEEEGKWSAKWIACGGRHTLAI 385
Query: 361 M 361
+
Sbjct: 386 V 386
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 143/328 (43%), Gaps = 55/328 (16%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKH-PEKVKQLQSEFVKSISCGA-H 124
+ G ++ A+ DGT+FTWG N+ G LG E ++ P +VK L + + + G H
Sbjct: 43 VVSGSRNSLAICDDGTMFTWGWNQRGTLGHPPETKTENIPSRVKALANVKITQAAIGGWH 102
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQ-------------GSNFPR--LFWGAFTPNTII 169
C A + R + WG N+ G R + P +
Sbjct: 103 CLAVDDQ----------GRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTV 152
Query: 170 CQVSCGSVHVVALSECGLLQAWGYN-EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
QV+ G H V L+ G + WG G + + +QG LE
Sbjct: 153 RQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQIFVPVRVQG----------------LE 196
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
++ ++ G +H+ A+ E+G + WG GQLG Q P V LD + + D+
Sbjct: 197 NVSIIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSH---PVPVHGLDDLTLVDI 253
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
A GG HS ALT KG +Y WG + G+LG G +S ++P + + L+ +
Sbjct: 254 AAGGWHSTALTDKGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVN--------LLAEEDII 305
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
V+CG +H++ RDGRI +G +G+
Sbjct: 306 QVSCGGTHSVALTRDGRIFSFGRGDHGR 333
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 108/257 (42%), Gaps = 30/257 (11%)
Query: 162 AFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFL 221
A P ++ VS GS + +A+ + G + WG+N+ G LG + P +K A
Sbjct: 34 ALEPYSVRSVVS-GSRNSLAICDDGTMFTWGWNQRGTLGHPPETKTENIPSRVKALANV- 91
Query: 222 DEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-- 279
KITQ + G +H AV + G Y WG GQ G L+ + R +V
Sbjct: 92 -------KITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPK 144
Query: 280 --LDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRN 337
+ ++ VA GG HS LT +G ++ WG P + F
Sbjct: 145 RCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQPWP---------------PGDIKQIFVP 189
Query: 338 IPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG- 396
+ + + N V ++A G H L DGR+ WG N YGQ + +P PV
Sbjct: 190 VRVQGLEN-VSIIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVHGLDDL 248
Query: 397 EVRKLAAGGGHSAVLAD 413
+ +AAGG HS L D
Sbjct: 249 TLVDIAAGGWHSTALTD 265
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 88/199 (44%), Gaps = 32/199 (16%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
IA G H A+ DG L WG NE+GQLG G + HP V L + I+ G +
Sbjct: 201 IAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVHGLDDLTLVDIAAGGWHS 260
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG------AFTPNTI-------ICQVS 173
A+ + E G WG+ + RL +G P + I QVS
Sbjct: 261 TALTDKGEVYG---------WGRGEHG---RLGFGDNDKSSKMVPQKVNLLAEEDIIQVS 308
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRG---ITCEGLQGPRVIKGYAKFLDEAPELEK- 229
CG H VAL+ G + ++G ++G+LG G T + L+ P +I + A E E+
Sbjct: 309 CGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIMIPPPEGSFNHADEEEEG 368
Query: 230 ---ITQVSCGEYHSAAVSE 245
++CG H+ A+ E
Sbjct: 369 KWSAKWIACGGRHTLAIVE 387
>gi|148234239|ref|NP_001080313.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Xenopus laevis]
gi|28278605|gb|AAH44119.1| Chc1l-prov protein [Xenopus laevis]
Length = 526
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 143/310 (46%), Gaps = 51/310 (16%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ + +F G N G LG G + P ++ L + + S+S G+ I
Sbjct: 36 ITKNDEVFVMGTNSSGCLGTGDAQSIIEPRRIDMLSGKRIVSLSYGSGPHVVI------- 88
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVS------------CGSVHVVALSE 184
S ++ WG N + +L G+ CQVS CGS H + L+
Sbjct: 89 -VTSDGEVYSWGHNA---YSQLGNGSTNQALSPCQVSTNLINKKAHSVACGSHHSMVLTC 144
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G + AWGYN GQ+G G T + + + + + + ++CG+ S AV
Sbjct: 145 DGEVYAWGYNNSGQVGSGSTAN--------QPIPRKVTSCLQNKTVIGIACGQMSSMAVV 196
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
+NGEVY WG GQLG L S + P R+ AL GI ++ V CG H+ ALT +G +
Sbjct: 197 DNGEVYAWGYNGNGQLG---LGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVM 253
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG---VQLVACGHSHT-LVY 360
YAWG + GQLG G N+S+ ++ P+ V+ + V++ AC SHT
Sbjct: 254 YAWGANSYGQLGTG----------NKSN---QSYPVQVIVDKERIVEIAACHSSHTSAAK 300
Query: 361 MRDGRIHGWG 370
+ G+++ WG
Sbjct: 301 SQSGQVYMWG 310
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 112/233 (48%), Gaps = 24/233 (10%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HVV ++ G + +WG+N Y QLG G T + L +V +K V+CG
Sbjct: 85 HVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLIN--------KKAHSVACGS 136
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHSC 296
+HS ++ +GEVY WG + GQ+G S + + +PR+V + L + +ACG + S
Sbjct: 137 HHSMVLTCDGEVYAWGYNNSGQVGSGSTAN---QPIPRKVTSCLQNKTVIGIACGQMSSM 193
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G +YAWG + GQLGLG + + R V+ V CG++H
Sbjct: 194 AVVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIR----------VEQVVCGYAH 243
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
TL +G ++ WG NSYGQ + Y PV V + R + HS+
Sbjct: 244 TLALTDEGVMYAWGANSYGQLGTGNKSNQSY--PVQVIVDKERIVEIAACHSS 294
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 112/248 (45%), Gaps = 37/248 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y WG+N Q G G Q P Q+ L N + +ACG H+
Sbjct: 89 VTSDGEVYSWGHNAYSQLG-NGSTNQALSPCQVSTNLI------NKKAHSVACGSHHSMV 141
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPREN 135
+ DG ++ WG N GQ+G G+ + P KV LQ++ V I+CG + A+ + E
Sbjct: 142 LTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGE- 200
Query: 136 DGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
++ WG N N P A + QV CG H +AL++ G+
Sbjct: 201 --------VYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGV 252
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSE 245
+ AWG N YGQLG G +VI + E+I ++ +C H SAA S+
Sbjct: 253 MYAWGANSYGQLGTGNKSNQSYPVQVI----------VDKERIVEIAACHSSHTSAAKSQ 302
Query: 246 NGEVYTWG 253
+G+VY WG
Sbjct: 303 SGQVYMWG 310
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 145/324 (44%), Gaps = 48/324 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGH-EHTA 75
I ++V G N SG G G + + P+++ + R + ++ G H
Sbjct: 36 ITKNDEVFVMGTNSSGCLG-TGDAQSIIEPRRID-------MLSGKRIVSLSYGSGPHVV 87
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAHCTAAIAEPRE 134
V SDG +++WG N + QLG+G+ P +V L ++ S++CG+H + +
Sbjct: 88 IVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAHSVACGSHHSMVLT---- 143
Query: 135 NDGTISTSRLWVWGQNQGSN----------FPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
DG + + WG N PR T+I ++CG + +A+ +
Sbjct: 144 CDGEV-----YAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVI-GIACGQMSSMAVVD 197
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G + AWGYN GQLG G + R+ A + ++ QV CG H+ A++
Sbjct: 198 NGEVYAWGYNGNGQLGLGSSGNQPTPCRI---------AALQGIRVEQVVCGYAHTLALT 248
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHSCALTSK- 301
+ G +Y WG S GQLG +G+K + P +V+ ++ AC H+ A S+
Sbjct: 249 DEGVMYAWGANSYGQLG-----TGNKSNQSYPVQVIVDKERIVEIAACHSSHTSAAKSQS 303
Query: 302 GALYAWGGSQAGQLGLGPQTRSFS 325
G +Y WG + GQ + P FS
Sbjct: 304 GQVYMWGQCR-GQSVITPHLTHFS 326
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 80/173 (46%), Gaps = 17/173 (9%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACG-GVHSCALT 299
+++N EV+ G S G LG +GD + + PRR+ L G I ++ G G H +T
Sbjct: 36 ITKNDEVFVMGTNSSGCLG-----TGDAQSIIEPRRIDMLSGKRIVSLSYGSGPHVVIVT 90
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
S G +Y+WG + QLG G ++ S P + T N VACG H++V
Sbjct: 91 SDGEVYSWGHNAYSQLGNGSTNQALS--PCQVSTNLIN-------KKAHSVACGSHHSMV 141
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
DG ++ WGYN+ GQ + + P V C+ + G + +A
Sbjct: 142 LTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMA 194
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 20/151 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WGYN +GQ G Q P A R + CG+ HT A+ +G
Sbjct: 201 VYAWGYNGNGQLGLGSSGNQ--------PTPCRIAALQGIRVEQVVCGYAHTLALTDEGV 252
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
++ WGAN +GQLG G + + +P +V + V+ +C +H +AA ++ +
Sbjct: 253 MYAWGANSYGQLGTGNKSNQSYPVQVIVDKERIVEIAACHSSHTSAAKSQ---------S 303
Query: 142 SRLWVWGQNQGSNF--PRLFWGAFTPNTIIC 170
++++WGQ +G + P L + T + C
Sbjct: 304 GQVYMWGQCRGQSVITPHLTHFSCTDDVFAC 334
>gi|294935296|ref|XP_002781372.1| hect e3 ubiquitin ligase, putative [Perkinsus marinus ATCC 50983]
gi|239891953|gb|EER13167.1| hect e3 ubiquitin ligase, putative [Perkinsus marinus ATCC 50983]
Length = 1285
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 158/350 (45%), Gaps = 46/350 (13%)
Query: 83 LFTWGANEFGQLGDGTEEGR---KHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
++ WG N GQ EEG+ + P++V +L KS+ G T ++E G
Sbjct: 38 VYCWGDNWCGQCLTENEEGKSVVERPQRVCELDRRHPKSLCVGPESTLVVSESGRIYGGG 97
Query: 140 STSRLWVWG---QNQGSNF-PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY-N 194
+ ++ G + S F PRL + + V+CG H VAL+ L WG N
Sbjct: 98 LNEKGYITGPDGDDSESLFKPRLVAYQELEQSFVTAVNCGDHHTVALTSNNLAIGWGRDN 157
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
E+GQ+G G PR++ P+ ++ QV+CG + + E GEVY G
Sbjct: 158 EFGQVGHGQPSIKPMPPRMMV--------TPQ--EVCQVACGGDFTLLLLETGEVYGTGN 207
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALD-----GIFIKDVACGGVHSCALTSKGALYAWGG 309
SVGQLG +G+ E + L+ G+ I+ ++ G H+CA++ G L+ WG
Sbjct: 208 NSVGQLG-----TGNTEEITTPKAVLNCGQTYGVPIRQISAGDAHACAISISGVLFTWGS 262
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNI---PILVVP--NGVQLVACGHSHTLVYMRDG 364
++ GQLG + R + P+ +P VQ+ +CG HT ++ G
Sbjct: 263 NRKGQLG-------------RENAGHREVLPGPVSCLPPTKAVQMASCGAQHTAAVVQGG 309
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADA 414
+++ WG N+ GQ + P P++ EV + A GGH + D
Sbjct: 310 QVYLWGDNASGQCGVDVVEEPILPIPINLQSKEVWRTVACGGHHTLFLDV 359
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 124/419 (29%), Positives = 179/419 (42%), Gaps = 73/419 (17%)
Query: 22 AIYVWGYNHSGQ------TGRKGRERQLRI-------PKQLPPELFGCPAGANSRWLDIA 68
A+Y WG N GQ G+ ER R+ PK L
Sbjct: 37 AVYCWGDNWCGQCLTENEEGKSVVERPQRVCELDRRHPKSL------------------C 78
Query: 69 CGHEHTAAVASDGTLFTWGANEFGQL----GDGTEEGRKHPEKV--KQLQSEFVKSISCG 122
G E T V+ G ++ G NE G + GD +E K P V ++L+ FV +++CG
Sbjct: 79 VGPESTLVVSESGRIYGGGLNEKGYITGPDGDDSESLFK-PRLVAYQELEQSFVTAVNCG 137
Query: 123 AHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVAL 182
H T A+ G + G Q S P TP + CQV+CG + L
Sbjct: 138 DHHTVALTSNNLAIGWGRDNEFGQVGHGQPSIKPMPPRMMVTPQEV-CQVACGGDFTLLL 196
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
E G + G N GQLG G T E + P+ + + I Q+S G+ H+ A
Sbjct: 197 LETGEVYGTGNNSVGQLGTGNT-EEITTPKAVLNCGQTYGVP-----IRQISAGDAHACA 250
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI-FIKDVACGGVHSCALTSK 301
+S +G ++TWG GQLG + +G +E+LP V L ++ +CG H+ A+
Sbjct: 251 ISISGVLFTWGSNRKGQLGREN--AGHREVLPGPVSCLPPTKAVQMASCGAQHTAAVVQG 308
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ------LVACGHS 355
G +Y WG + +GQ G+ + E PIL +P +Q VACG
Sbjct: 309 GQVYLWGDNASGQCGVD--------VVEE--------PILPIPINLQSKEVWRTVACGGH 352
Query: 356 HTLVYMRDGRIHGWGYNSYGQAAN--EKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
HTL +G++ G G N GQ + P+ + + V +AAG HSAVLA
Sbjct: 353 HTLFLDVNGQLFGCGSNEDGQLGTGFPGRSSELRPTLMPRSLA-VFSVAAGRSHSAVLA 410
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 14/114 (12%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQ---LPPELFGCPAGANSRWLDIA-CGHE 72
I ++ WG N GQ GR+ + +P LPP ++ + +A CG +
Sbjct: 251 ISISGVLFTWGSNRKGQLGRENAGHREVLPGPVSCLPP----------TKAVQMASCGAQ 300
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
HTAAV G ++ WG N GQ G E P + E ++++CG H T
Sbjct: 301 HTAAVVQGGQVYLWGDNASGQCGVDVVEEPILPIPINLQSKEVWRTVACGGHHT 354
>gi|408681156|ref|YP_006880983.1| LPXTG-motif cell wall anchor domain [Streptomyces venezuelae ATCC
10712]
gi|328885485|emb|CCA58724.1| LPXTG-motif cell wall anchor domain [Streptomyces venezuelae ATCC
10712]
Length = 408
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/348 (31%), Positives = 146/348 (41%), Gaps = 50/348 (14%)
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
T+ +WGA GQLG+GT P V L V +S G +A D T+ +
Sbjct: 46 TVLSWGAGRTGQLGNGTLSDSLSPSSVTSLFRGDVDQMSAGGTSSADSFALARTDKTVKS 105
Query: 142 SRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNE 195
WG N G N + T I V+ G H +AL G + +WG N
Sbjct: 106 -----WGHNSSGQLGNGGNTNQTVPTTVPRLTDIKDVAAGGKHALALDTSGQVYSWGDNS 160
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
YGQLG T + P ++G + K+ Q+S G S A+ ENG+VY WG G
Sbjct: 161 YGQLGNNRTGDSRTVPDRVQG----------MPKVKQISAGCDFSLALLENGKVYAWGRG 210
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
GQLG + + +PR+V L+ I D C H+ ALT+ + +WG + GQL
Sbjct: 211 IHGQLGTGNRATSS---VPRQVQGLENIVEIDAGC--YHALALTADDTVKSWGYNLYGQL 265
Query: 316 GLGPQTRSFSLIPNESDTYFRNIPILVV-PNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
G S T +P+ V GV + G H V D + GWG N Y
Sbjct: 266 G-------------NSSTKSSTLPVDVDWIEGVSDIEAGAFHNYVKTSDSHVWGWGNNQY 312
Query: 375 GQA--------ANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLAD 413
GQ AN T P + G V+ LAAG H AV AD
Sbjct: 313 GQLLESDEAFDANVSRTNRTAPVEIPRLEG-VQHLAAGARHGVAVTAD 359
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 136/312 (43%), Gaps = 55/312 (17%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+ WG+N SGQ G G Q +P +P L D+A G +H A+ + G
Sbjct: 103 VKSWGHNSSGQLGNGGNTNQT-VPTTVP-RLTDIK--------DVAAGGKHALALDTSGQ 152
Query: 83 LFTWGANEFGQLGDG-TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+++WG N +GQLG+ T + R P++V+ + VK IS G + A+ E
Sbjct: 153 VYSWGDNSYGQLGNNRTGDSRTVPDRVQGMPK--VKQISAGCDFSLALLE---------N 201
Query: 142 SRLWVWGQ----------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
+++ WG+ S+ PR G I ++ G H +AL+ +++W
Sbjct: 202 GKVYAWGRGIHGQLGTGNRATSSVPRQVQGLEN----IVEIDAGCYHALALTADDTVKSW 257
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
GYN YGQLG T + + +E ++ + G +H+ + + V+
Sbjct: 258 GYNLYGQLGNSSTKS-----------STLPVDVDWIEGVSDIEAGAFHNYVKTSDSHVWG 306
Query: 252 WGLGSVGQL-----GHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
WG GQL + S P + L+G ++ +A G H A+T+ ++
Sbjct: 307 WGNNQYGQLLESDEAFDANVSRTNRTAPVEIPRLEG--VQHLAAGARHGVAVTAD-DVFT 363
Query: 307 WGGSQAGQLGLG 318
WG + GQLG G
Sbjct: 364 WGHNGEGQLGNG 375
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 84/210 (40%), Gaps = 42/210 (20%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG GQ G R +P+Q+ ++I G H A+ +D T
Sbjct: 204 VYAWGRGIHGQLGTGNRATS-SVPRQVQ---------GLENIVEIDAGCYHALALTADDT 253
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ +WG N +GQLG+ + + P V + E V I GA N S S
Sbjct: 254 VKSWGYNLYGQLGNSSTKSSTLPVDVDWI--EGVSDIEAGAF---------HNYVKTSDS 302
Query: 143 RLWVWGQNQGSNFPRLFWG--AFTPNTI---------------ICQVSCGSVHVVALSEC 185
+W WG NQ + +L AF N + ++ G+ H VA++
Sbjct: 303 HVWGWGNNQ---YGQLLESDEAFDANVSRTNRTAPVEIPRLEGVQHLAAGARHGVAVTAD 359
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIK 215
+ WG+N GQLG G T + +++
Sbjct: 360 DVF-TWGHNGEGQLGNGTTVARYESVKILN 388
>gi|356573964|ref|XP_003555124.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 395
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 156/360 (43%), Gaps = 39/360 (10%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I ++ WG+N G + + P ++ A ++ + + A G H A
Sbjct: 53 IADDGKLFTWGWNQRATLGHPAETKSENKTENTPSQV---KALSSVKIVQAAIGGWHCLA 109
Query: 77 VASDGTLFTWGANEFGQLG------DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIA 130
V G + WG NE+GQ G DGT + ++ Q + + A T ++
Sbjct: 110 VDDQGRAYAWGGNEYGQCGEEPERKDGTGRPLRRDIEIPQRCAPKLVVRQVAAGGTHSVV 169
Query: 131 EPRENDGTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
RE +W WGQ + + P G + ++ G+ H +AL E
Sbjct: 170 LTREG-------HVWTWGQPWPPGDIKQISVPVRVQGLEN----VRLIAVGAFHNLALQE 218
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G L AWG NEYGQLG G T Q P ++G + + ++ G +HS A++
Sbjct: 219 DGTLWAWGNNEYGQLGTGDTQPRSQ-PIRVQGLSDL--------TLVDIAAGGWHSTALT 269
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
+ GEVY WG G G+LG K ++P++V L G I V+CGG HS ALT G +
Sbjct: 270 DEGEVYGWGRGEHGRLGFGDSDKSSK-MVPQKVQLLAGEDIVQVSCGGTHSVALTRDGHM 328
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG---VQLVACGHSHTLVYM 361
+++G G+LG G + + + D P G +LVACG HTL +
Sbjct: 329 FSFGRGDHGRLGYGRKVTTGQPMEVPIDLPPPQDPSGTATEGHWIAKLVACGGRHTLAIV 388
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 169/407 (41%), Gaps = 82/407 (20%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQ--LRIPKQLPPELFGCPAGANSRWLDIACGHEHT 74
+ + S I WG GQ G E + + + K L P R + G ++
Sbjct: 1 MDSHSHIIAWGSGEDGQLGIGSNEEKEWVCLVKALQPH----------RIRSVVAGSRNS 50
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKH-----PEKVKQLQS-EFVKSISCGAHCTAA 128
A+A DG LFTWG N+ LG E ++ P +VK L S + V++ G HC A
Sbjct: 51 LAIADDGKLFTWGWNQRATLGHPAETKSENKTENTPSQVKALSSVKIVQAAIGGWHCLAV 110
Query: 129 I-----------------AEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQ 171
EP DGT R + P+ P ++ Q
Sbjct: 111 DDQGRAYAWGGNEYGQCGEEPERKDGTGRPLR-------RDIEIPQ----RCAPKLVVRQ 159
Query: 172 VSCGSVHVVALSECGLLQAWGY----NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL 227
V+ G H V L+ G + WG + Q+ + +GL+ R+I
Sbjct: 160 VAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLENVRLI------------- 206
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+ G +H+ A+ E+G ++ WG GQLG Q + P RV L + + D
Sbjct: 207 ------AVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQ---PIRVQGLSDLTLVD 257
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
+A GG HS ALT +G +Y WG + G+LG G +S ++P + + +L + V
Sbjct: 258 IAAGGWHSTALTDEGEVYGWGRGEHGRLGFGDSDKSSKMVP-------QKVQLLAGEDIV 310
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPS--PVD 392
Q V+CG +H++ RDG + +G +G+ + P P+D
Sbjct: 311 Q-VSCGGTHSVALTRDGHMFSFGRGDHGRLGYGRKVTTGQPMEVPID 356
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 76/178 (42%), Gaps = 17/178 (9%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
+ + + WG G GQLG S + + L V AL I+ V G +S A+ G
Sbjct: 1 MDSHSHIIAWGSGEDGQLGIGSNEEKEWVCL---VKALQPHRIRSVVAGSRNSLAIADDG 57
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
L+ WG +Q LG +T+S N+++ + L VQ A G H L
Sbjct: 58 KLFTWGWNQRATLGHPAETKS----ENKTENTPSQVKALSSVKIVQ-AAIGGWHCLAVDD 112
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPV-------DWCVGE--VRKLAAGGGHSAVL 411
GR + WG N YGQ E P+ C + VR++AAGG HS VL
Sbjct: 113 QGRAYAWGGNEYGQCGEEPERKDGTGRPLRRDIEIPQRCAPKLVVRQVAAGGTHSVVL 170
>gi|428174549|gb|EKX43444.1| hypothetical protein GUITHDRAFT_61168, partial [Guillardia theta
CCMP2712]
Length = 308
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/308 (33%), Positives = 148/308 (48%), Gaps = 33/308 (10%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLP-PELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG +G G + QL +PK L P ++ P+ IACG HT AV DG
Sbjct: 19 VYSWGCA-NGALGHGNSKSQL-LPKALDRPLIYSMPSITT-----IACGEFHTLAVGQDG 71
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE--NDGTI 139
TL+TWG N++GQLG G + K P +V+ L+ + + G + + E + G+
Sbjct: 72 TLWTWGRNQYGQLGHGDCKTHKLPRRVEALEKKICIKAAAGGQHSLVLTEANKVYAFGSN 131
Query: 140 STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
+L + + + S P + + + +C ++CG H +AL + L +WG N+ GQL
Sbjct: 132 VFGQLGLESKVKYSAAPDIV--SRLRRSGVCHITCGYSHSMALLKSEQLYSWGRNDCGQL 189
Query: 200 GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENG--------EVY 250
G G P + + K ++ Q+SCG H+ A VSE +VY
Sbjct: 190 GLG-HYRSSPVPEHLTMFKK--------SQVQQISCGYDHNIAFVSEYAGPGVPPLEKVY 240
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
TWG G GQLGH L S +P+ V L I+ VA GG S A+ LY WG S
Sbjct: 241 TWGRGEEGQLGHDELYS---RCVPKVVQTLLARGIRAVAAGGFSSAAIDEAKQLYTWGCS 297
Query: 311 QAGQLGLG 318
+ GQLG G
Sbjct: 298 REGQLGHG 305
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 106/206 (51%), Gaps = 23/206 (11%)
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAP--ELEKI 230
+CG +H VAL+E G + +WG G LG G + L K LD + I
Sbjct: 4 ACGKLHTVALTEEGRVYSWGCAN-GALGHGNSKSQL--------LPKALDRPLIYSMPSI 54
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
T ++CGE+H+ AV ++G ++TWG GQLGH ++ LPRRV AL+ A
Sbjct: 55 TTIACGEFHTLAVGQDGTLWTWGRNQYGQLGHGDCKT---HKLPRRVEALEKKICIKAAA 111
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
GG HS LT +YA+G + GQLGL + + +S P+ R+ GV +
Sbjct: 112 GGQHSLVLTEANKVYAFGSNVFGQLGLESKVK-YSAAPDIVSRLRRS--------GVCHI 162
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQ 376
CG+SH++ ++ +++ WG N GQ
Sbjct: 163 TCGYSHSMALLKSEQLYSWGRNDCGQ 188
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 150/361 (41%), Gaps = 84/361 (23%)
Query: 68 ACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTA 127
ACG HT A+ +G +++WG G LG G + + P K L + S+
Sbjct: 4 ACGKLHTVALTEEGRVYSWGCAN-GALGHGNSKSQLLP---KALDRPLIYSMPS------ 53
Query: 128 AIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
I ++CG H +A+ + G
Sbjct: 54 -----------------------------------------ITTIACGEFHTLAVGQDGT 72
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
L WG N+YGQLG G C+ + PR + EA E + + + G HS ++E
Sbjct: 73 LWTWGRNQYGQLGHG-DCKTHKLPRRV--------EALEKKICIKAAAGGQHSLVLTEAN 123
Query: 248 EVYTWGLGSVGQLGHCSLQSGDK-ELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
+VY +G GQLG L+S K P V L + + CG HS AL LY+
Sbjct: 124 KVYAFGSNVFGQLG---LESKVKYSAAPDIVSRLRRSGVCHITCGYSHSMALLKSEQLYS 180
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD--- 363
WG + GQLGLG RS S +P E T F+ + VQ ++CG+ H + ++ +
Sbjct: 181 WGRNDCGQLGLG-HYRS-SPVP-EHLTMFKK-------SQVQQISCGYDHNIAFVSEYAG 230
Query: 364 ------GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADACS 416
+++ WG GQ +++ P V + +R +AAGG SA + +A
Sbjct: 231 PGVPPLEKVYTWGRGEEGQLGHDELYSRCVPKVVQTLLARGIRAVAAGGFSSAAIDEAKQ 290
Query: 417 L 417
L
Sbjct: 291 L 291
>gi|26353276|dbj|BAC40268.1| unnamed protein product [Mus musculus]
Length = 531
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 152/367 (41%), Gaps = 83/367 (22%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G +A + ++V+G N+S G G + +PK+L G + L
Sbjct: 26 VFGTSANEAIYVTDNDEVFVFGLNYSNCLG-TGDNQSTLVPKKLEA-----LCGKKIKSL 79
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
G H DG ++ WG N + QLG+GT P +V C
Sbjct: 80 SYGSG-PHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQV----------------C 122
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
T + + + +V+CGS H +AL+
Sbjct: 123 TNLLIKQ------------------------------------VIEVACGSHHSMALAAD 146
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G L AWGYN GQ+G G T PR I +++ ++CG+ S AV +
Sbjct: 147 GELFAWGYNNCGQVGSGSTANQ-PTPRKIT-------NCLHTKRVVNIACGQTSSMAVLD 198
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+GEVY WG GQLG L + +L P RV AL G+ + + CG H+ ALT +G LY
Sbjct: 199 SGEVYGWGYNGNGQLG---LGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLY 255
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV-QLVACGHSHT-LVYMRD 363
AWG + GQLG G + S P + I+V V ++ AC +HT +
Sbjct: 256 AWGANTYGQLGTGSKNNLLS--PTQ---------IMVEKERVIEIAACHSTHTSAAKTQG 304
Query: 364 GRIHGWG 370
G ++ WG
Sbjct: 305 GHVYMWG 311
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 104/203 (51%), Gaps = 28/203 (13%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HV+ +E G++ AWG+N Y QLG G T +G+ +V ++++ +V+CG
Sbjct: 86 HVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLL--------IKQVIEVACGS 137
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHSC 296
+HS A++ +GE++ WG + GQ+G S + + PR++ L + ++ACG S
Sbjct: 138 HHSMALAADGELFAWGYNNCGQVGSGSTAN---QPTPRKITNCLHTKRVVNIACGQTSSM 194
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLVACG 353
A+ G +Y WG + GQLGLG + P+ V V + CG
Sbjct: 195 AVLDSGEVYGWGYNGNGQLGLGNNGNQLT-------------PVRVAALHGMCVNQIVCG 241
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQ 376
++HTL +G ++ WG N+YGQ
Sbjct: 242 YAHTLALTDEGLLYAWGANTYGQ 264
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 17/173 (9%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHSCALT 299
V++N EV+ +GL LG +GD + L+P+++ AL G IK ++ G G H T
Sbjct: 37 VTDNDEVFVFGLNYSNCLG-----TGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTT 91
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
G +YAWG + QLG G + + + ++ + V VACG H++
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQ---------VIEVACGSHHSMA 142
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
DG + WGYN+ GQ + + P + C+ R + G ++ +A
Sbjct: 143 LAADGELFAWGYNNCGQVGSGSTANQPTPRKITNCLHTKRVVNIACGQTSSMA 195
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 18/150 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WGYN +GQ G QL P ++ C I CG+ HT A+ +G
Sbjct: 202 VYGWGYNGNGQLGLGNNGNQLT-PVRVAALHGMCVN-------QIVCGYAHTLALTDEGL 253
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+ WGAN +GQLG G++ P ++ + ++ +C + T+A
Sbjct: 254 LYAWGANTYGQLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSA--------AKTQGG 305
Query: 143 RLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L T + C
Sbjct: 306 HVYMWGQCRGQSVILPHLTHFCCTDDVFAC 335
>gi|52345808|ref|NP_001004950.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Xenopus (Silurana) tropicalis]
gi|49522414|gb|AAH75441.1| MGC89218 protein [Xenopus (Silurana) tropicalis]
Length = 526
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 155/340 (45%), Gaps = 57/340 (16%)
Query: 51 PELFGCPAGANSRWLDIAC----GHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPE 106
P CP + +++ AC G+E +D +F G N G LG G + P
Sbjct: 8 PIFALCPQ-EDLKFIQQACVFGAGNEVLYLTKND-EVFVMGTNSSGCLGTGDAQSILEPR 65
Query: 107 KVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPN 166
++ L + + S+S G+ I S ++ WG N + +L G+
Sbjct: 66 RIDMLSGKRIVSLSYGSGPHVVIVT--------SDGEVYSWGHNA---YSQLGNGSTNQA 114
Query: 167 TIICQVS------------CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVI 214
CQVS CGS H + L+ G + AWGYN GQ+G G T
Sbjct: 115 LSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTAN-------- 166
Query: 215 KGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLP 274
+ + + + + + ++CG+ S AV +NGEVY WG GQLG L S + P
Sbjct: 167 QPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLG---LGSSGNQPTP 223
Query: 275 RRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTY 334
R+ AL GI ++ V CG H+ ALT +G +YAWG + GQLG G N+S+
Sbjct: 224 CRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTG----------NKSN-- 271
Query: 335 FRNIPILVVPNG---VQLVACGHSHT-LVYMRDGRIHGWG 370
++ P+ V+ + V++ AC SHT + G+++ WG
Sbjct: 272 -QSYPVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWG 310
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 112/233 (48%), Gaps = 24/233 (10%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HVV ++ G + +WG+N Y QLG G T + L +V +K V+CG
Sbjct: 85 HVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLIN--------KKAISVACGS 136
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHSC 296
+HS ++ +GEVY WG + GQ+G S + + +PR+V + L + +ACG + S
Sbjct: 137 HHSMVLTCDGEVYAWGYNNSGQVGSGSTAN---QPIPRKVTSCLQNKTVIGIACGQMSSM 193
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G +YAWG + GQLGLG + + R V+ V CG++H
Sbjct: 194 AVVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIR----------VEQVVCGYAH 243
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
TL +G ++ WG NSYGQ + Y PV V + R + HS+
Sbjct: 244 TLALTDEGVMYAWGANSYGQLGTGNKSNQSY--PVQVIVDKERIVEIAACHSS 294
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 113/248 (45%), Gaps = 37/248 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y WG+N Q G G Q P Q+ L N + + +ACG H+
Sbjct: 89 VTSDGEVYSWGHNAYSQLG-NGSTNQALSPCQVSTNLI------NKKAISVACGSHHSMV 141
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPREN 135
+ DG ++ WG N GQ+G G+ + P KV LQ++ V I+CG + A+ + E
Sbjct: 142 LTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGE- 200
Query: 136 DGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
++ WG N N P A + QV CG H +AL++ G+
Sbjct: 201 --------VYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGV 252
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSE 245
+ AWG N YGQLG G +VI + E+I ++ +C H SAA S+
Sbjct: 253 MYAWGANSYGQLGTGNKSNQSYPVQVI----------VDKERIVEIAACHSSHTSAAKSQ 302
Query: 246 NGEVYTWG 253
+G+VY WG
Sbjct: 303 SGQVYMWG 310
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 144/318 (45%), Gaps = 48/318 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGH-EHTAAVASDG 81
++V G N SG G G + + P+++ + R + ++ G H V SDG
Sbjct: 42 VFVMGTNSSGCLG-TGDAQSILEPRRID-------MLSGKRIVSLSYGSGPHVVIVTSDG 93
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+++WG N + QLG+G+ P +V L ++ S++CG+H + + DG +
Sbjct: 94 EVYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLT----CDGEV- 148
Query: 141 TSRLWVWGQNQGSN----------FPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
+ WG N PR T+I ++CG + +A+ + G + A
Sbjct: 149 ----YAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVI-GIACGQMSSMAVVDNGEVYA 203
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WGYN GQLG G + R+ A + ++ QV CG H+ A+++ G +Y
Sbjct: 204 WGYNGNGQLGLGSSGNQPTPCRI---------AALQGIRVEQVVCGYAHTLALTDEGVMY 254
Query: 251 TWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHSCALTSK-GALYAW 307
WG S GQLG +G+K + P +V+ ++ AC H+ A S+ G +Y W
Sbjct: 255 AWGANSYGQLG-----TGNKSNQSYPVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMW 309
Query: 308 GGSQAGQLGLGPQTRSFS 325
G + GQ + P FS
Sbjct: 310 GQCR-GQSVITPHLTHFS 326
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 81/173 (46%), Gaps = 17/173 (9%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHSCALT 299
+++N EV+ G S G LG +GD + L PRR+ L G I ++ G G H +T
Sbjct: 36 LTKNDEVFVMGTNSSGCLG-----TGDAQSILEPRRIDMLSGKRIVSLSYGSGPHVVIVT 90
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
S G +Y+WG + QLG G ++ S P + T N + V ACG H++V
Sbjct: 91 SDGEVYSWGHNAYSQLGNGSTNQALS--PCQVSTNLINKKAISV-------ACGSHHSMV 141
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
DG ++ WGYN+ GQ + + P V C+ + G + +A
Sbjct: 142 LTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMA 194
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 20/151 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WGYN +GQ G Q P A R + CG+ HT A+ +G
Sbjct: 201 VYAWGYNGNGQLGLGSSGNQ--------PTPCRIAALQGIRVEQVVCGYAHTLALTDEGV 252
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
++ WGAN +GQLG G + + +P +V + V+ +C +H +AA ++ +
Sbjct: 253 MYAWGANSYGQLGTGNKSNQSYPVQVIVDKERIVEIAACHSSHTSAAKSQ---------S 303
Query: 142 SRLWVWGQNQGSNF--PRLFWGAFTPNTIIC 170
++++WGQ +G + P L + T + C
Sbjct: 304 GQVYMWGQCRGQSVITPHLTHFSCTDDVFAC 334
>gi|432092257|gb|ELK24881.1| Putative E3 ubiquitin-protein ligase HERC1 [Myotis davidii]
Length = 4856
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 168/381 (44%), Gaps = 84/381 (22%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPP-------- 51
MD + T+RP D ++ K +Y+WG GQ GR + +P P
Sbjct: 3962 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMVPAAAPSFSQAQQVI 4019
Query: 52 -------------ELFGCPAGANSRW------------------------LDIACGHE-H 73
+ C G+ R L +CG + H
Sbjct: 4020 CGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGH 4079
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
+ A+ G +F+WG ++G+LG G + ++ P +++ LQ E V +SCG +A +
Sbjct: 4080 SMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT--- 4136
Query: 134 ENDGTIST------SRLWVWGQNQGSNFPRLF-------WGAFTPNTIICQVSCGSVHVV 180
+DG + T RL + G P G +IIC V+CG H +
Sbjct: 4137 -SDGKLFTFGNGDYGRLGL-GNTSNKKLPERVTALEGYQIGQARNKSIICSVACGLNHTL 4194
Query: 181 ALSECG-LLQAWGYNEYGQLGRGITC--EGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
A+S G ++ A+G +YG+LG G + Q V+ G I +V+CG
Sbjct: 4195 AVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-----------IKKVACGT 4243
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
S A++++G+VYT+G + L ++ ++ P++V L G+ I+DVA G H+ A
Sbjct: 4244 QFSVALTKDGQVYTFGQDRLIGLPEGRARNHNR---PQQVPVLAGVVIEDVAVGAEHTLA 4300
Query: 298 LTSKGALYAWGGSQAGQLGLG 318
LTS G +YAWG + GQLGLG
Sbjct: 4301 LTSTGDIYAWGSNSEGQLGLG 4321
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 182/405 (44%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ PK P + S I G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQ-PKLAP---------SFSDAQTIEAGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG----T 138
+ G +G+LG G + +K+L E +SI ++ + +DG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQS---TLKKLTFEPHRSIK-------KVSSSKGSDGHTLAF 473
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ ++ WG + +P+L G ++C VS G H A++E G L
Sbjct: 474 TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGEL 532
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G + P ++K ++ + +VSCG H+ A+S++G
Sbjct: 533 YTWGEGDFGRLGHGDS-NSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 581
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ + AL G+FI+ V G S +LTS G +Y
Sbjct: 582 TVWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVY 636
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V ++ G SH L D
Sbjct: 637 AWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-ISIGDSHCLALSHDNE 685
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQVSAGTSHS 730
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 144/318 (45%), Gaps = 56/318 (17%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V SDG
Sbjct: 4089 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTSDGK 4140
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQ---------SEFVKSISCGAHCTAAIAEPR 133
LFT+G ++G+LG G +K PE+V L+ + S++CG + T A++
Sbjct: 4141 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNKSIICSVACGLNHTLAVSA-- 4198
Query: 134 ENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNT------IIC-----QVSCGSVHVVAL 182
DG++ +W +G ++ +L G T + ++C +V+CG+ VAL
Sbjct: 4199 --DGSM----VWAFGDG---DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4249
Query: 183 SECGLLQAWGYNEYGQL--GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
++ G + +G + L GR Q V+ G I V+ G H+
Sbjct: 4250 TKDGQVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVV-----------IEDVAVGAEHT 4298
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
A++ G++Y WG S GQLG L + P V L G ++ ++ G HS A T+
Sbjct: 4299 LALTSTGDIYAWGSNSEGQLG---LGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTA 4355
Query: 301 KGA-LYAWGGSQAGQLGL 317
A G S QLGL
Sbjct: 4356 PPVPPRAPGVSVPLQLGL 4373
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P I I +V GS ++L+ G + AW
Sbjct: 583 -VWSFG---GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I +S G+ H A+S + EVY
Sbjct: 639 GCG--ACLGCGSSEATALRPKLIEELAA--------TRIVDISIGDSHCLALSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDGI I+ V+ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQVSAGTSHSLAWTA 735
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 82/189 (43%), Gaps = 28/189 (14%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +GQL G V+ A AP + QV CG+ + + NG V
Sbjct: 3988 WGAGRHGQLAEA-------GRNVMVPAA-----APSFSQAQQVICGQNCTFVIQANGTVL 4035
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGALYAW 307
G GS G+LG + S D +L + AL G + + +CG HS ALT G +++W
Sbjct: 4036 ACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSW 4092
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G R R I L VQ+ +CG H+ V DG++
Sbjct: 4093 GDGDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLF 4142
Query: 368 GWGYNSYGQ 376
+G YG+
Sbjct: 4143 TFGNGDYGR 4151
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VSE EVY WG S QL G +E + + +A + + G + +++ G
Sbjct: 368 VSETCEVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ A G G+LGLG +L + + R+I + G HTL +
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RSIKKVSSSKG------SDGHTLAFTT 475
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+G + WG YG+ + S+ YP + + G+V ++AG HSA + +
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
>gi|445493754|ref|ZP_21460798.1| hypothetical protein Jab_1c00440 [Janthinobacterium sp. HH01]
gi|444789915|gb|ELX11462.1| hypothetical protein Jab_1c00440 [Janthinobacterium sp. HH01]
Length = 471
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/318 (30%), Positives = 140/318 (44%), Gaps = 46/318 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I ++ WGYN GQ G G + P Q+ G + W +A G H A
Sbjct: 189 IRTDGTLWAWGYNQDGQLG-DGTQINRTAPTQI---------GKDKDWNLVAAGKAHALA 238
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V + G L+ WG N+ GQLGDGT R P K+ L +IS G T AI
Sbjct: 239 VKTSGALYAWGRNDRGQLGDGTAINRTAPLKIGIL---LWSAISAGETHTMAIQR----- 290
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI------ICQVSCGSVHVVALSECGLLQA 190
T+ L+ WG N L P + +S G+ H A++ G L A
Sbjct: 291 ---DTNDLYGWGGNTYGQVGNLL-KVDVPAPVKIGTLKWTSLSAGAFHTTAITNSGTLYA 346
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG N YGQLG + + L P I + + +Q++ G H+ + +G ++
Sbjct: 347 WGQNTYGQLGNNGSLD-LTSPAQIGTDSNW----------SQIAAGTQHTLGLRNDGTLW 395
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
+WG + GQLG G + P+++ G K VA G HS L + L+ WG +
Sbjct: 396 SWGANTEGQLG----TGGTDVVTPQQLGT--GNNWKSVAAGKAHSFGLKTDDTLWGWGRN 449
Query: 311 QAGQLGLGPQTRSFSLIP 328
Q GQLG G QT +++ IP
Sbjct: 450 QEGQLGNG-QTAAYAPIP 466
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 108/389 (27%), Positives = 169/389 (43%), Gaps = 75/389 (19%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A +Y WG N GQ G I + P + +G + W +A G + A+
Sbjct: 140 ADGNLYSWGENIKGQLGDS-----TTINRSAPVLV----SGGGTSWKQVALGDQFAVAIR 190
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
+DGTL+ WG N+ GQLGDGT+ R P ++ + ++ + AH A
Sbjct: 191 TDGTLWAWGYNQDGQLGDGTQINRTAPTQIGK-DKDWNLVAAGKAHALAV---------- 239
Query: 139 ISTSRLWVWGQN------QGSNFPR--------LFWGAFTPNTIICQVSCGSVHVVALS- 183
++ L+ WG+N G+ R L W A +S G H +A+
Sbjct: 240 KTSGALYAWGRNDRGQLGDGTAINRTAPLKIGILLWSA---------ISAGETHTMAIQR 290
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ L WG N YGQ+G + + + P I G K+ T +S G +H+ A+
Sbjct: 291 DTNDLYGWGGNTYGQVGNLLKVD-VPAPVKI-GTLKW----------TSLSAGAFHTTAI 338
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+ +G +Y WG + GQLG+ +G +L + D + +A G H+ L + G
Sbjct: 339 TNSGTLYAWGQNTYGQLGN----NGSLDLTSPAQIGTDSNW-SQIAAGTQHTLGLRNDGT 393
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 363
L++WG + GQLG G + + P + L N + VA G +H+ D
Sbjct: 394 LWSWGANTEGQLGTG---GTDVVTPQQ----------LGTGNNWKSVAAGKAHSFGLKTD 440
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVD 392
+ GWG N GQ N + T A+ P PV+
Sbjct: 441 DTLWGWGRNQEGQLGNGQ-TAAYAPIPVN 468
>gi|224119280|ref|XP_002331272.1| predicted protein [Populus trichocarpa]
gi|224152233|ref|XP_002337209.1| predicted protein [Populus trichocarpa]
gi|222838468|gb|EEE76833.1| predicted protein [Populus trichocarpa]
gi|222873697|gb|EEF10828.1| predicted protein [Populus trichocarpa]
Length = 143
Score = 120 bits (300), Expect = 2e-24, Method: Composition-based stats.
Identities = 81/142 (57%), Positives = 97/142 (68%), Gaps = 11/142 (7%)
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
+YTWGLG++GQLGH SLQSG+KELLPRRVVALDGIF DVA A+T KGALYAWG
Sbjct: 9 MYTWGLGNMGQLGHTSLQSGEKELLPRRVVALDGIFSNDVA------YAVTQKGALYAWG 62
Query: 309 GSQAGQLGLGPQTRSF--SLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR-DGR 365
G QAGQLGLG S + N++ F +L + + + T +++R DGR
Sbjct: 63 GGQAGQLGLGLSNLDLFHSFLVNQNP--FCETSLLWLSQLMCNLLLVDILTHLFLRGDGR 120
Query: 366 IHGWGYNSYGQAANEKSTYAWY 387
IHGWG+NSYGQAANEKST WY
Sbjct: 121 IHGWGFNSYGQAANEKSTLGWY 142
>gi|89273844|emb|CAJ81935.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Xenopus (Silurana) tropicalis]
Length = 526
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 155/340 (45%), Gaps = 57/340 (16%)
Query: 51 PELFGCPAGANSRWLDIAC----GHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPE 106
P CP + +++ AC G+E +D +F G N G LG G + P
Sbjct: 8 PIFALCPQ-EDLKFIQQACVFGAGNEVLYLTKND-EVFVMGTNSSGCLGTGDAQSIIEPR 65
Query: 107 KVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPN 166
++ L + + S+S G+ I S ++ WG N + +L G+
Sbjct: 66 RIDMLSGKRIVSLSYGSGPHVVIVT--------SDGEVYSWGHNA---YSQLGNGSTNQA 114
Query: 167 TIICQVS------------CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVI 214
CQVS CGS H + L+ G + AWGYN GQ+G G T
Sbjct: 115 LSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTAN-------- 166
Query: 215 KGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLP 274
+ + + + + + ++CG+ S AV +NGEVY WG GQLG L S + P
Sbjct: 167 QPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLG---LGSSGNQPTP 223
Query: 275 RRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTY 334
R+ AL GI ++ V CG H+ ALT +G +YAWG + GQLG G N+S+
Sbjct: 224 CRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTG----------NKSN-- 271
Query: 335 FRNIPILVVPNG---VQLVACGHSHT-LVYMRDGRIHGWG 370
++ P+ V+ + V++ AC SHT + G+++ WG
Sbjct: 272 -QSYPVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWG 310
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 112/233 (48%), Gaps = 24/233 (10%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HVV ++ G + +WG+N Y QLG G T + L +V +K V+CG
Sbjct: 85 HVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLIN--------KKAISVACGS 136
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHSC 296
+HS ++ +GEVY WG + GQ+G S + + +PR+V + L + +ACG + S
Sbjct: 137 HHSMVLTCDGEVYAWGYNNSGQVGSGSTAN---QPIPRKVTSCLQNKTVIGIACGQMSSM 193
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G +YAWG + GQLGLG + + R V+ V CG++H
Sbjct: 194 AVVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIR----------VEQVVCGYAH 243
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
TL +G ++ WG NSYGQ + Y PV V + R + HS+
Sbjct: 244 TLALTDEGVMYAWGANSYGQLGTGNKSNQSY--PVQVIVDKERIVEIAACHSS 294
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 113/248 (45%), Gaps = 37/248 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y WG+N Q G G Q P Q+ L N + + +ACG H+
Sbjct: 89 VTSDGEVYSWGHNAYSQLG-NGSTNQALSPCQVSTNLI------NKKAISVACGSHHSMV 141
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPREN 135
+ DG ++ WG N GQ+G G+ + P KV LQ++ V I+CG + A+ + E
Sbjct: 142 LTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGE- 200
Query: 136 DGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
++ WG N N P A + QV CG H +AL++ G+
Sbjct: 201 --------VYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGV 252
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSE 245
+ AWG N YGQLG G +VI + E+I ++ +C H SAA S+
Sbjct: 253 MYAWGANSYGQLGTGNKSNQSYPVQVI----------VDKERIVEIAACHSSHTSAAKSQ 302
Query: 246 NGEVYTWG 253
+G+VY WG
Sbjct: 303 SGQVYMWG 310
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 144/318 (45%), Gaps = 48/318 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGH-EHTAAVASDG 81
++V G N SG G G + + P+++ + R + ++ G H V SDG
Sbjct: 42 VFVMGTNSSGCLG-TGDAQSIIEPRRID-------MLSGKRIVSLSYGSGPHVVIVTSDG 93
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+++WG N + QLG+G+ P +V L ++ S++CG+H + + DG +
Sbjct: 94 EVYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLT----CDGEV- 148
Query: 141 TSRLWVWGQNQGSN----------FPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
+ WG N PR T+I ++CG + +A+ + G + A
Sbjct: 149 ----YAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVI-GIACGQMSSMAVVDNGEVYA 203
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WGYN GQLG G + R+ A + ++ QV CG H+ A+++ G +Y
Sbjct: 204 WGYNGNGQLGLGSSGNQPTPCRI---------AALQGIRVEQVVCGYAHTLALTDEGVMY 254
Query: 251 TWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHSCALTSK-GALYAW 307
WG S GQLG +G+K + P +V+ ++ AC H+ A S+ G +Y W
Sbjct: 255 AWGANSYGQLG-----TGNKSNQSYPVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMW 309
Query: 308 GGSQAGQLGLGPQTRSFS 325
G + GQ + P FS
Sbjct: 310 GQCR-GQSVITPHLTHFS 326
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 81/173 (46%), Gaps = 17/173 (9%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACG-GVHSCALT 299
+++N EV+ G S G LG +GD + + PRR+ L G I ++ G G H +T
Sbjct: 36 LTKNDEVFVMGTNSSGCLG-----TGDAQSIIEPRRIDMLSGKRIVSLSYGSGPHVVIVT 90
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
S G +Y+WG + QLG G ++ S P + T N + V ACG H++V
Sbjct: 91 SDGEVYSWGHNAYSQLGNGSTNQALS--PCQVSTNLINKKAISV-------ACGSHHSMV 141
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
DG ++ WGYN+ GQ + + P V C+ + G + +A
Sbjct: 142 LTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMA 194
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 20/151 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WGYN +GQ G Q P A R + CG+ HT A+ +G
Sbjct: 201 VYAWGYNGNGQLGLGSSGNQ--------PTPCRIAALQGIRVEQVVCGYAHTLALTDEGV 252
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
++ WGAN +GQLG G + + +P +V + V+ +C +H +AA ++ +
Sbjct: 253 MYAWGANSYGQLGTGNKSNQSYPVQVIVDKERIVEIAACHSSHTSAAKSQ---------S 303
Query: 142 SRLWVWGQNQGSNF--PRLFWGAFTPNTIIC 170
++++WGQ +G + P L + T + C
Sbjct: 304 GQVYMWGQCRGQSVITPHLTHFSCTDDVFAC 334
>gi|408500623|ref|YP_006864542.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465447|gb|AFU70976.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1271
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 147/363 (40%), Gaps = 52/363 (14%)
Query: 57 PAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQ---LQS 113
PA ++ I G H+ A+ SDG+L+ WG N GQ+GD + R+ P K +
Sbjct: 199 PATRGIKFSQITSGATHSLALGSDGSLYAWGDNSSGQVGDNSTTLRQTPVKTNKPANASD 258
Query: 114 EFV-KSISCGAHCTAAIAEPRENDGTISTSRLWVWGQN-QGSNFPRLFWGAFTPNTII-- 169
+F +I+ G H + AI S L+ WG N +G TP +
Sbjct: 259 QFTFTTIAAGDHSSLAIG---------SDGNLYAWGNNTRGQLGDGTTENKLTPVKVPKP 309
Query: 170 ---------CQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF 220
QVS H +AL L AWG+N YGQLG G P
Sbjct: 310 AGVSNEFTWTQVSARWDHTLALGSNHNLYAWGWNGYGQLGNTSVPTGSDNPAAYSS-KPV 368
Query: 221 LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL 280
L P TQ+S G YHS A+ + ++Y WGL + G+LG + + P V
Sbjct: 369 LVSTPAGVTFTQLSAGRYHSLALGSDKQLYAWGLNTSGRLGDG---TDIQRFTPVPVRQP 425
Query: 281 DGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI 340
G+ + G A+++ G LYAWG + G+LG G S+ R P
Sbjct: 426 AGVTFSQFSAGDTSCFAISTNGDLYAWGWNGYGRLGDG------------SNAEDRRTPT 473
Query: 341 LVV-PNGVQL------VACGHSHTLVYMRDGRIHGWGYNSYGQAA----NEKSTYAWYPS 389
L+ P+G V H L DG ++ WG N YGQ N +Y P
Sbjct: 474 LISPPDGASAGFTWARVMVRDDHVLAIGSDGNLYSWGLNEYGQLGIKDINTDGSYISRPH 533
Query: 390 PVD 392
VD
Sbjct: 534 IVD 536
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 123/430 (28%), Positives = 173/430 (40%), Gaps = 98/430 (22%)
Query: 57 PAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV-KQLQSEF 115
PA R+ ++ G +H+ A+ SDG +++WGAN++GQLGDGT R P ++ K
Sbjct: 756 PAARGIRFSQVSAGDDHSLALGSDGNVYSWGANKYGQLGDGTATDRLTPVQIPKPTGVNR 815
Query: 116 VKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQ----GSNF---------------P 156
+S G + A+ DG +W WG N GSN
Sbjct: 816 FTQVSAGTGFSLAL------DG---QGHVWAWGLNSSGQLGSNAIATNGSSAYSSSPIRV 866
Query: 157 RLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLG--------RGITCEGL 208
+ G N + +S G HV+A+ G WG NE+G+LG GIT +
Sbjct: 867 QAPSGMTATNFTLTGISAGITHVLAVDGQGRAWGWGSNEFGKLGVPASTVATTGITTRPV 926
Query: 209 QGPRVIKGYAKFLDEAPELEKI----TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCS 264
Q P+ E QVS G HS A G + WG G LG+ S
Sbjct: 927 Q------------VATPQGETTGFHYAQVSAGGSHSLATDTQGRAWGWGSNQNGALGNTS 974
Query: 265 LQSGDKELLPRRVVALD---------GIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
D L + G + G HS AL G +++WGG+ G+L
Sbjct: 975 ----DVALNGYTTTPVQAKPGTNPSGGFNPAQIIAGSGHSLALDDLGRIWSWGGNSNGEL 1030
Query: 316 GLGPQTRSFSLIPNESDTYFRNIPILV-VPNGV----QLVACGHS-HTLVYMRDGRIHGW 369
GLG DT R P +V +P V QL S ++L ++G I GW
Sbjct: 1031 GLG-------------DTTTRTAPSMVAMPANVSTFTQLTGSRVSGNSLALDQNGNIWGW 1077
Query: 370 GYNSYGQAAN------EKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLADACSL--KEL 420
G NS G + T PS +D V K+ AG GH+ AV +D +L +
Sbjct: 1078 GQNSSGMLGTGGTGSLNRPTKMSNPSGIDHFV----KVCAGTGHTLAVASDGSTLGWGDN 1133
Query: 421 CEFRLAESVT 430
+ RL + T
Sbjct: 1134 SQGRLGNNAT 1143
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 140/350 (40%), Gaps = 54/350 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSR--WLDIACGHEHTAAVASD 80
+Y WG N GQ G E +L P ++P PAG ++ W ++ +HT A+ S+
Sbjct: 281 LYAWGNNTRGQLGDGTTENKL-TPVKVP-----KPAGVSNEFTWTQVSARWDHTLALGSN 334
Query: 81 GTLFTWGANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
L+ WG N +GQLG+ + G +P + S G T A +
Sbjct: 335 HNLYAWGWNGYGQLGNTSVPTGSDNPAAYSS--KPVLVSTPAGVTFTQLSAGRYHSLALG 392
Query: 140 STSRLWVWGQN------QGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECG 186
S +L+ WG N G++ R FTP + Q S G A+S G
Sbjct: 393 SDKQLYAWGLNTSGRLGDGTDIQR-----FTPVPVRQPAGVTFSQFSAGDTSCFAISTNG 447
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
L AWG+N YG+LG G E + P +I D A +V + H A+ +
Sbjct: 448 DLYAWGWNGYGRLGDGSNAEDRRTPTLISP----PDGASAGFTWARVMVRDDHVLAIGSD 503
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV------ALDGIFIKDVACGGVHSCALTS 300
G +Y+WGL GQLG + + + +V + G S AL S
Sbjct: 504 GNLYSWGLNEYGQLGIKDINTDGSYISRPHIVDQSTSSTAQKFTWTQINAGWRESSALGS 563
Query: 301 KGALYAWGGSQAGQLG---------------LGPQTRSFSLIPNESDTYF 335
G LY WG + GQLG L P +F L P+ + F
Sbjct: 564 DGNLYTWGWNNGGQLGDPTVPIGTDNSQAMRLTPSLAAFPLSPDVTAVKF 613
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 150/425 (35%), Gaps = 68/425 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANS--RWLDIACGHEHT 74
I +Y WG+N G+ G R P + P P GA++ W + +H
Sbjct: 443 ISTNGDLYAWGWNGYGRLGDGSNAEDRRTPTLISP-----PDGASAGFTWARVMVRDDHV 497
Query: 75 AAVASDGTLFTWGANEFGQLG------DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
A+ SDG L++WG NE+GQLG DG+ R H V Q S + + T
Sbjct: 498 LAIGSDGNLYSWGLNEYGQLGIKDINTDGSYISRPH--IVDQSTSSTAQKFT----WTQI 551
Query: 129 IAEPRENDGTISTSRLWVWGQNQGSNF--PRLFWGA-------FTPNTIICQVSCGSVHV 179
A RE+ S L+ WG N G P + G TP+ +S V
Sbjct: 552 NAGWRESSALGSDGNLYTWGWNNGGQLGDPTVPIGTDNSQAMRLTPSLAAFPLSPDVTAV 611
Query: 180 VALSECGL-LQAWGYN--------EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
G L+ G N GQ+ IT L GP+ + D +
Sbjct: 612 KFDRTLGRDLKRAGTNWQVATPAHRKGQIKAAITWN-LYGPQPDEILDYTYDPPIYVVTF 670
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
+ + S +V E+ S + R DG F DVA
Sbjct: 671 DKADGSQPTSQSVIED-----------------QTASRPDQDPTRPGFLFDGWFNGDVAY 713
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
S + L A + AGQ + P P+ T +P V
Sbjct: 714 D--FSSPVKGPTKLTAHWTAGAGQWTISPNQG-----PDSGQTKVTLVPPAARGIRFSQV 766
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQ----AANEKSTYAWYPSPVDWCVGEVRKLAAGGG 406
+ G H+L DG ++ WG N YGQ A ++ T P P V +++AG G
Sbjct: 767 SAGDDHSLALGSDGNVYSWGANKYGQLGDGTATDRLTPVQIPKPT--GVNRFTQVSAGTG 824
Query: 407 HSAVL 411
S L
Sbjct: 825 FSLAL 829
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
I+ WG N SG G G R P P+G + ++ + G HT AVASDG+
Sbjct: 1074 IWGWGQNSSGMLGTGGTGSLNR------PTKMSNPSGID-HFVKVCAGTGHTLAVASDGS 1126
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKV 108
WG N G+LG+ E P V
Sbjct: 1127 TLGWGDNSQGRLGNNATETVYSPVSV 1152
>gi|158257096|dbj|BAF84521.1| unnamed protein product [Homo sapiens]
Length = 815
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 161/354 (45%), Gaps = 49/354 (13%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIP---KQLPPELFGCPAGANSRWLDIACGHEH 73
+ + +Y++G N+ GQ G G + + P K L PE A CG H
Sbjct: 50 VTGNNKLYMFGSNNWGQLGL-GSKSAVSKPTCVKALKPEKVKLAA----------CGRNH 98
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF-VKSISCGAHCTAAIAEP 132
T G ++ G N GQLG G E R + SE +K +S G++ +AA+ E
Sbjct: 99 TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTE- 157
Query: 133 RENDGTISTSRLWVWGQN-QGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECG 186
DG RL++WG N +G + P + + +SCG H ++ G
Sbjct: 158 ---DG-----RLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDG 209
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
L +G E G+LG + + L R + + E PE K+ QV+CG H+ ++EN
Sbjct: 210 ELYVFGEPENGKLG--LPNQLLGNHRT----PQLVSEIPE--KVIQVACGGEHTVVLTEN 261
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
VYT+GLG GQLG + E P+ + + I ++CG H+ +T G +Y
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSE--PKVIENIRDQTISYISCGENHTALITDIGLMYT 318
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+G + G+LGLG + + IP + R I V+LVACG H +V+
Sbjct: 319 FGDGRHGKLGLGLENFTNHFIPTLCSNFLRFI--------VKLVACGGCHMVVF 364
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 167/360 (46%), Gaps = 36/360 (10%)
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
N + ++CG EH+A V + L+ +G+N +GQLG G++ P VK L+ E VK +
Sbjct: 34 NDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAA 93
Query: 121 CGAHCTAAIAE--PRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVH 178
CG + T E G + +L + + + F + + FT I Q+S GS
Sbjct: 94 CGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISF--FTSEHKIKQLSAGSNT 151
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
AL+E G L WG N GQ+G +V G + ++ +SCG Y
Sbjct: 152 SAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIG-----------KPVSWISCGYY 200
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
HSA V+ +GE+Y +G G+LG + G+ P+ V + I+ VACGG H+ L
Sbjct: 201 HSAFVTTDGELYVFGEPENGKLGLPNQLLGNHR-TPQLVSEIPEKVIQ-VACGGEHTVVL 258
Query: 299 TSKGALYAWGGSQAGQLGLGP---QTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS 355
T + A+Y +G Q GQLGLG +T +I N D + ++CG +
Sbjct: 259 T-ENAVYTFGLGQFGQLGLGTFLFETSEPKVIENIRD------------QTISYISCGEN 305
Query: 356 HTLVYMRDGRIHGWGYNSYGQ--AANEKSTYAWYPSPVDWCVGEVRKLAA-GGGHSAVLA 412
HT + G ++ +G +G+ E T + P+ + + KL A GG H V A
Sbjct: 306 HTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFA 365
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 121/284 (42%), Gaps = 51/284 (17%)
Query: 144 LWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
++ +G+++ N P FW N + +SCG H ++ L +G N +GQLG G
Sbjct: 14 VFTFGKSKFAENNPGKFWFK---NDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLG 70
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
+ + P +K A + EK+ +CG H+ +E G VY G + GQLG
Sbjct: 71 -SKSAVSKPTCVK--------ALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLG- 120
Query: 263 CSLQSGDKELLPRRVVALDGIF-----IKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GD E R + F IK ++ G S ALT G L+ WG + GQ+GL
Sbjct: 121 ----LGDTE--ERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGL 174
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQL------VACGHSHTLVYMRDGRIHGWGY 371
+N+ + VP V + ++CG+ H+ DG ++ +G
Sbjct: 175 ------------------KNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVFGE 216
Query: 372 NSYGQAANEKSTYAWYPSP--VDWCVGEVRKLAAGGGHSAVLAD 413
G+ + +P V +V ++A GG H+ VL +
Sbjct: 217 PENGKLGLPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTE 260
>gi|74204005|dbj|BAE29004.1| unnamed protein product [Mus musculus]
Length = 926
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 118/237 (49%), Gaps = 17/237 (7%)
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
VSCG H VA+ G + AWG GQLG G E P IK A KI
Sbjct: 79 VSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGI--------KII 130
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
QVSCG YHS A+SE+G V++WG S GQLG ++ + +P++V +L+GI + VA G
Sbjct: 131 QVSCGHYHSLALSEDGHVFSWGRNSEGQLGLG--KNSRSQAIPQKVKSLEGIPLAQVAAG 188
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVA 351
G HS AL+ G + WG +++GQL L + S +N+ ++ + +
Sbjct: 189 GTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYI-------S 241
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
CG+ HT V +G++ +G NS GQ + P ++ G V ++ H+
Sbjct: 242 CGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQIECASYHT 298
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 125/269 (46%), Gaps = 32/269 (11%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
L A G H+ + S+ +++ G N +GQLG ++ + PE ++ L V +SCG
Sbjct: 25 LQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKE 84
Query: 125 CTAAIAEPRENDGTISTSRLWVWG-----QNQGSNFPRLFWGAFTPNTI-------ICQV 172
+ A+ +++ WG Q F + +F P I I QV
Sbjct: 85 HSVAVCH---------KGKVFAWGAGSEGQLGIGEFKEI---SFMPTKIKALAGIKIIQV 132
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
SCG H +ALSE G + +WG N GQLG G P+ +K L+ P + Q
Sbjct: 133 SCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKS----LEGIP----LAQ 184
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
V+ G HS A+S G + WG GQL + ++ P + AL + + ++CG
Sbjct: 185 VAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGY 244
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQT 321
H+ LT +G ++ +GG+ +GQL P++
Sbjct: 245 EHTAVLTEEGQVFTFGGNSSGQLQPSPRS 273
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 124/270 (45%), Gaps = 33/270 (12%)
Query: 152 GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
GS PR A T + Q + G H + L + + G N +GQLG+ + + P
Sbjct: 8 GSRKPRRL-KAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQR-RDQSTERP 65
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
I+ + VSCG+ HS AV G+V+ WG GS GQLG + +
Sbjct: 66 EPIQALNDL--------HVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFK--EIS 115
Query: 272 LLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNES 331
+P ++ AL GI I V+CG HS AL+ G +++WG + GQLGLG +RS IP +
Sbjct: 116 FMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRS-QAIPQKV 174
Query: 332 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA---NEKSTYAWYP 388
+ IP+ VA G +H+ G GWG N GQ A N+ + P
Sbjct: 175 KS-LEGIPL-------AQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKP 226
Query: 389 SPVDWCVGEVRKLAA-----GGGHSAVLAD 413
+G ++ L+ G H+AVL +
Sbjct: 227 H----SIGALKNLSVIYISCGYEHTAVLTE 252
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 112/249 (44%), Gaps = 39/249 (15%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG GQ G + +P ++ A A + + ++CGH H+ A++
Sbjct: 92 KGKVFAWGAGSEGQLGIGEFKEISFMPTKIK-------ALAGIKIIQVSCGHYHSLALSE 144
Query: 80 DGTLFTWGANEFGQLGDG-TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG +F+WG N GQLG G + P+KVK L+ + ++ G + A++ + G
Sbjct: 145 DGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFG- 203
Query: 139 ISTSRLWVWGQNQGSNFP----RLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
WG N+ ++ + P++I + +SCG H L+E G
Sbjct: 204 --------WGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQ 255
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSEN 246
+ +G N GQL G +GP++I+G +++Q+ C YH+ A V
Sbjct: 256 VFTFGGNSSGQLQPS-PRSGQRGPQLIEGIGG---------RVSQIECASYHTIAYVYTT 305
Query: 247 GEVYTWGLG 255
G+V + G G
Sbjct: 306 GQVVSLGRG 314
>gi|307106099|gb|EFN54346.1| hypothetical protein CHLNCDRAFT_24715 [Chlorella variabilis]
Length = 393
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 164/355 (46%), Gaps = 51/355 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLP-PELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG N GQ G + ++ +P ++ PE R + ++ G+ HT V G
Sbjct: 58 VYTWGLNDKGQLGHDSEDSEVGLPGEVAMPE----------RVVALSAGYYHTLCVGESG 107
Query: 82 TLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE--NDGT 138
+++++G N GQLG G + + P VK LQ V +++ G + A+ E + G
Sbjct: 108 SVWSFGCNGKGQLGLGKDVVLVREPRLVKSLQDNKVVAVAAGMEHSLALTAGGEVYSWGN 167
Query: 139 ISTSRLWVWGQNQGSNFPRLFWGA---FTPNTI-------ICQVSCGSVHVVALSECGLL 188
+ RL GS PR +G+ F P + + QVS G +H A+S G
Sbjct: 168 AANGRL-----GHGSATPRRLFGSSIEFLPRLVRAFEALRVEQVSAGQMHSAAVSTAGDA 222
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT-QVSCGEYHSAAVSENG 247
WGY ++ QLG G + E L GP V+ P L+ T V+CG HS A+ G
Sbjct: 223 FLWGYGKFHQLGFG-SDEDLAGPTVL----------PPLKGSTAAVACGSLHSLALQYGG 271
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY-- 305
V WG G LG Q +K+ P+R + G+ + +A G HS A+T G LY
Sbjct: 272 HVLAWGTNQNGVLG----QGHEKQQQPKRPSKVPGVSAEQIAAGWKHSAAVTGSGKLYTW 327
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYF---RNIPILVVPNGVQLVACGHSHT 357
WGGSQ L +T + + + +D + ++ L + LVACG +HT
Sbjct: 328 GWGGSQGTALSFEGRTGTGGQLGHGNDFDYWSPHHVDWLSLTE-TDLVACGMNHT 381
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 121/418 (28%), Positives = 179/418 (42%), Gaps = 76/418 (18%)
Query: 31 SGQTGRKGRERQLRIPKQLPP---ELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWG 87
+G GR G + ++LP L G P A +ACG HTAAV GT++TWG
Sbjct: 10 NGDCGRLGHSLEY-ASEELPRVVRALLGVPLKA------VACGGAHTAAVDDSGTVYTWG 62
Query: 88 ANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWV 146
N+ GQLG +E+ P +V E V ++S G + T + E + +W
Sbjct: 63 LNDKGQLGHDSEDSEVGLPGEVA--MPERVVALSAGYYHTLCVGE---------SGSVWS 111
Query: 147 WGQNQGSNF-----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNE 195
+G N PRL + N ++ V+ G H +AL+ G + +WG
Sbjct: 112 FGCNGKGQLGLGKDVVLVREPRLV-KSLQDNKVVA-VAAGMEHSLALTAGGEVYSWGNAA 169
Query: 196 YGQLGRGITCEGLQGPRVIKG----YAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G+LG G PR + G + L A E ++ QVS G+ HSAAVS G+ +
Sbjct: 170 NGRLGHGSAT-----PRRLFGSSIEFLPRLVRAFEALRVEQVSAGQMHSAAVSTAGDAFL 224
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG G QLG S D++L V+ VACG +HS AL G + AWG +Q
Sbjct: 225 WGYGKFHQLGFGS----DEDLAGPTVLPPLKGSTAAVACGSLHSLALQYGGHVLAWGTNQ 280
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGRIHGWG 370
G LG G + + P++ VP + +A G H+ G+++ WG
Sbjct: 281 NGVLGQGHEKQQQPKRPSK------------VPGVSAEQIAAGWKHSAAVTGSGKLYTWG 328
Query: 371 Y--------------NSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLAD 413
+ + GQ + W P VDW + E +A G H+A + +
Sbjct: 329 WGGSQGTALSFEGRTGTGGQLGHGNDFDYWSPHHVDWLSLTETDLVACGMNHTAAIVE 386
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 111/247 (44%), Gaps = 50/247 (20%)
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+L +G + G+LG + + PRV++ + V+CG H+AAV ++
Sbjct: 4 VLATFGNGDCGRLGHSLEYASEELPRVVRALLGV--------PLKAVACGGAHTAAVDDS 55
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKEL-------LPRRVVALDGIFIKDVACGGVHSCALT 299
G VYTWGL GQLGH S D E+ +P RVVAL + G H+ +
Sbjct: 56 GTVYTWGLNDKGQLGH---DSEDSEVGLPGEVAMPERVVAL--------SAGYYHTLCVG 104
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLVACGHSH 356
G+++++G + GQLGLG D P LV N V VA G H
Sbjct: 105 ESGSVWSFGCNGKGQLGLG------------KDVVLVREPRLVKSLQDNKVVAVAAGMEH 152
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKST-YAWYPSPVDWCVGEVR--------KLAAGGGH 407
+L G ++ WG + G+ + +T + S +++ VR +++AG H
Sbjct: 153 SLALTAGGEVYSWGNAANGRLGHGSATPRRLFGSSIEFLPRLVRAFEALRVEQVSAGQMH 212
Query: 408 SAVLADA 414
SA ++ A
Sbjct: 213 SAAVSTA 219
>gi|383851572|ref|XP_003701306.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Megachile rotundata]
Length = 864
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 165/377 (43%), Gaps = 75/377 (19%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-A 123
+ I CG EH+A + G LF +G+N++GQLG G P VK L+ E V ++CG A
Sbjct: 110 VSITCGDEHSAVICQSGRLFVFGSNDWGQLGLGHRNHISKPSCVKVLKPEKVTHVACGRA 169
Query: 124 HCTAAIAEPRENDGTIST--SRLWVWGQNQ-------------GSNFPRLFWGAFTPNTI 168
H IST +++ G +Q S+ P L + A +
Sbjct: 170 HT------------LISTGAQKIFACGSDQEGQLGRGTSAIGDSSSSPVLVYDAGLAGSK 217
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I Q++ GS H +AL G + AWG N GQLG + P + P E
Sbjct: 218 ILQLAAGSHHSLALISDGGVFAWGSNLEGQLGLPDVSGLVNKPTKV--------HIP--E 267
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG---HCSLQSGDKEL-LPRRVVALDGIF 284
+ Q+S G YHSA ++E+G VY G G+LG + S Q K++ LP V
Sbjct: 268 PVKQISAGYYHSAFLTESGLVYICGESESGKLGIDVNFSTQITPKQMQLPSPAVH----- 322
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLG--------PQTRSFSLIPNESDTYFR 336
VACGG H+ L G +Y G + GQLGLG P+ S ++ NE+
Sbjct: 323 ---VACGGHHTVVLAENGNIYCTGSNSNGQLGLGTNVTELHTPKLLSRGMLQNET----- 374
Query: 337 NIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG 396
+ ++CG SHT + G++ G +G+ E++ +
Sbjct: 375 ----------ISRISCGESHTAIVTESGKLFTCGDGRHGKLGLEENENNVHELTFVQRYK 424
Query: 397 E--VRKLAAGGGHSAVL 411
E V K+A GG H+ +L
Sbjct: 425 ELFVSKVACGGCHTILL 441
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 120/248 (48%), Gaps = 29/248 (11%)
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKS 118
A S+ L +A G H+ A+ SDG +F WG+N GQLG G P KV E VK
Sbjct: 214 AGSKILQLAAGSHHSLALISDGGVFAWGSNLEGQLGLPDVSGLVNKPTKVH--IPEPVKQ 271
Query: 119 ISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNF--PRLFWGAFTPNTI-----ICQ 171
IS G + +A + E + +++ G+++ F TP +
Sbjct: 272 ISAGYYHSAFLTE---------SGLVYICGESESGKLGIDVNFSTQITPKQMQLPSPAVH 322
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVI-KGYAKFLDEAPELEKI 230
V+CG H V L+E G + G N GQLG G L P+++ +G + E I
Sbjct: 323 VACGGHHTVVLAENGNIYCTGSNSNGQLGLGTNVTELHTPKLLSRGMLQN-------ETI 375
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
+++SCGE H+A V+E+G+++T G G G+LG ++ EL V +F+ VAC
Sbjct: 376 SRISCGESHTAIVTESGKLFTCGDGRHGKLGLEENENNVHELT--FVQRYKELFVSKVAC 433
Query: 291 GGVHSCAL 298
GG H+ L
Sbjct: 434 GGCHTILL 441
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 113/299 (37%), Gaps = 60/299 (20%)
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVV 180
GA A + G + T + N S+F F + ++CG H
Sbjct: 68 VGAETNMADVSVLKESGAVFTVGRSRFADNIASHF-------FIRKDPVVSITCGDEHSA 120
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
+ + G L +G N++GQLG G + P +K EK+T V+CG H+
Sbjct: 121 VICQSGRLFVFGSNDWGQLGLGHRNH-ISKPSCVKVLKP--------EKVTHVACGRAHT 171
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV--VALDGIFIKDVACGGVHSCAL 298
+ +++ G GQLG + GD P V L G I +A G HS AL
Sbjct: 172 LISTGAQKIFACGSDQEGQLGRGTSAIGDSSSSPVLVYDAGLAGSKILQLAAGSHHSLAL 231
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNE----------SDTYFR------------ 336
S G ++AWG + GQLGL P P + S Y+
Sbjct: 232 ISDGGVFAWGSNLEGQLGL-PDVSGLVNKPTKVHIPEPVKQISAGYYHSAFLTESGLVYI 290
Query: 337 -------------NIPILVVPNGVQL------VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
N + P +QL VACG HT+V +G I+ G NS GQ
Sbjct: 291 CGESESGKLGIDVNFSTQITPKQMQLPSPAVHVACGGHHTVVLAENGNIYCTGSNSNGQ 349
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 90/203 (44%), Gaps = 44/203 (21%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG-----HCSLQSGDKELLPRRVVALDGIF 284
+ ++CG+ HSA + ++G ++ +G GQLG H S S K L P +V
Sbjct: 109 VVSITCGDEHSAVICQSGRLFVFGSNDWGQLGLGHRNHISKPSCVKVLKPEKVTH----- 163
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP 344
VACG H+ T ++A G Q GQLG R S I + S + P+LV
Sbjct: 164 ---VACGRAHTLISTGAQKIFACGSDQEGQLG-----RGTSAIGDSSSS-----PVLVYD 210
Query: 345 NG------VQLVACGHSHTLVYMRDGRIHGWGYNSYGQ-------AANEKSTYAWYPSPV 391
G +QL A H H+L + DG + WG N GQ K T P P
Sbjct: 211 AGLAGSKILQLAAGSH-HSLALISDGGVFAWGSNLEGQLGLPDVSGLVNKPTKVHIPEP- 268
Query: 392 DWCVGEVRKLAAGGGHSAVLADA 414
V++++AG HSA L ++
Sbjct: 269 ------VKQISAGYYHSAFLTES 285
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 49/116 (42%), Gaps = 6/116 (5%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
IY G N +GQ G +L PK L + N I+CG HTA V G
Sbjct: 339 IYCTGSNSNGQLGLGTNVTELHTPKLLSRGML-----QNETISRISCGESHTAIVTESGK 393
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSE-FVKSISCGAHCTAAIAEPRENDG 137
LFT G G+LG E H Q E FV ++CG T + + RE +G
Sbjct: 394 LFTCGDGRHGKLGLEENENNVHELTFVQRYKELFVSKVACGGCHTILLGQRREMEG 449
>gi|348563524|ref|XP_003467557.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Cavia
porcellus]
Length = 1016
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 119/243 (48%), Gaps = 17/243 (6%)
Query: 166 NTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAP 225
N + VSCG H +A+ G + AWG GQLG G E P+ IK
Sbjct: 80 NLPVDLVSCGKEHSLAVCHKGKVFAWGVGSDGQLGTGKFEEICFIPQKIKALTGI----- 134
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFI 285
KI Q+SCG YHS A+S++G+V++WG S GQLG Q + P+RV +L+GI +
Sbjct: 135 ---KIIQISCGYYHSLALSKDGQVFSWGKNSHGQLGLG--QEFPSQASPQRVRSLEGIPL 189
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
VA GG HS AL+ G + WG + AGQL S +N+
Sbjct: 190 AQVAAGGAHSFALSLSGTSFGWGNNSAGQLAFSGNNVLVQSYKPRSVGALKNL------- 242
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGG 405
GV ++CG+ HT V ++ ++ +G NS+GQ + + P V+ G V ++ G
Sbjct: 243 GVVYISCGYEHTAVLTQNDQVFTFGDNSFGQLGHNGVSQTTGPQLVEGIGGPVSQIDCGS 302
Query: 406 GHS 408
H+
Sbjct: 303 YHT 305
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 119/254 (46%), Gaps = 36/254 (14%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ Q + G H + L ++ A G N GQLGR G Q P I+
Sbjct: 31 LLQAASGERHALLLLTNQVVHACGDNSGGQLGRRGAPSGKQ-PEPIQALVNL-------- 81
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
+ VSCG+ HS AV G+V+ WG+GS GQLG + + +P+++ AL GI I +
Sbjct: 82 PVDLVSCGKEHSLAVCHKGKVFAWGVGSDGQLGTGKFE--EICFIPQKIKALTGIKIIQI 139
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
+CG HS AL+ G +++WG + GQLGLG + S S R++ G+
Sbjct: 140 SCGYYHSLALSKDGQVFSWGKNSHGQLGLGQEFPS-----QASPQRVRSL------EGIP 188
Query: 349 L--VACGHSHTLVYMRDGRIHGWGYNSYGQAA---NEKSTYAWYPSPVDWCVGEVRKL-- 401
L VA G +H+ G GWG NS GQ A N ++ P VG ++ L
Sbjct: 189 LAQVAAGGAHSFALSLSGTSFGWGNNSAGQLAFSGNNVLVQSYKPR----SVGALKNLGV 244
Query: 402 ---AAGGGHSAVLA 412
+ G H+AVL
Sbjct: 245 VYISCGYEHTAVLT 258
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 136/321 (42%), Gaps = 48/321 (14%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
L A G H + ++ + G N GQLG K PE ++ L + V +SCG
Sbjct: 32 LQAASGERHALLLLTNQVVHACGDNSGGQLGRRGAPSGKQPEPIQALVNLPVDLVSCGKE 91
Query: 125 CTAAIAEPRENDGTISTSRLWVW-----GQNQGSNFPRLFWGAFTPNTI-------ICQV 172
+ A+ +++ W GQ F + F P I I Q+
Sbjct: 92 HSLAVCH---------KGKVFAWGVGSDGQLGTGKFEEI---CFIPQKIKALTGIKIIQI 139
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
SCG H +ALS+ G + +WG N +GQLG G P+ ++ L+ P + Q
Sbjct: 140 SCGYYHSLALSKDGQVFSWGKNSHGQLGLGQEFPSQASPQRVRS----LEGIP----LAQ 191
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
V+ G HS A+S +G + WG S GQL + PR V AL + + ++CG
Sbjct: 192 VAAGGAHSFALSLSGTSFGWGNNSAGQLAFSGNNVLVQSYKPRSVGALKNLGVVYISCGY 251
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLV 350
H+ LT ++ +G + GQLG +++ P LV + V +
Sbjct: 252 EHTAVLTQNDQVFTFGDNSFGQLGHNGVSQTTG-------------PQLVEGIGGPVSQI 298
Query: 351 ACGHSHTLVYM-RDGRIHGWG 370
CG HTL Y+ G++ +G
Sbjct: 299 DCGSYHTLAYVYTTGQVVSFG 319
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 151/352 (42%), Gaps = 63/352 (17%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++ G N GQ GR+G P PE A N ++CG EH+ AV G
Sbjct: 49 VVHACGDNSGGQLGRRGA------PSGKQPE--PIQALVNLPVDLVSCGKEHSLAVCHKG 100
Query: 82 TLFTWGANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+F WG GQLG G EE P+K+K L + ISCG + + A+++ DG +
Sbjct: 101 KVFAWGVGSDGQLGTGKFEEICFIPQKIKALTGIKIIQISCGYYHSLALSK----DGQV- 155
Query: 141 TSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
+ WG+N G FP +P + + QV+ G H ALS G
Sbjct: 156 ----FSWGKNSHGQLGLGQEFP----SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGT 207
Query: 188 LQAWGYNEYGQL---GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
WG N GQL G + + + PR + G K L + +SCG H+A ++
Sbjct: 208 SFGWGNNSAGQLAFSGNNVLVQSYK-PRSV-GALKNLG-------VVYISCGYEHTAVLT 258
Query: 245 ENGEVYTWGLGSVGQLGH--CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
+N +V+T+G S GQLGH S +G P+ V + G + + CG H+ A
Sbjct: 259 QNDQVFTFGDNSFGQLGHNGVSQTTG-----PQLVEGIGGP-VSQIDCGSYHTLA----- 307
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGH 354
Y + Q G P S P E+ + +I L+ + ++ + H
Sbjct: 308 --YVYTTGQVVSFGREPSHTSNPTHP-ETPSENSDISCLISADDLRDIQIKH 356
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 111/247 (44%), Gaps = 39/247 (15%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG GQ G E IP+++ A + + I+CG+ H+ A++
Sbjct: 99 KGKVFAWGVGSDGQLGTGKFEEICFIPQKIK-------ALTGIKIIQISCGYYHSLALSK 151
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG +F+WG N GQLG G E + P++V+ L+ + ++ G + A++ + G
Sbjct: 152 DGQVFSWGKNSHGQLGLGQEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFG- 210
Query: 139 ISTSRLWVWGQNQGSNFP----RLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
WG N + ++ P ++ + +SCG H L++
Sbjct: 211 --------WGNNSAGQLAFSGNNVLVQSYKPRSVGALKNLGVVYISCGYEHTAVLTQNDQ 262
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSEN 246
+ +G N +GQLG + GP++++G ++Q+ CG YH+ A V
Sbjct: 263 VFTFGDNSFGQLGHNGVSQT-TGPQLVEGIGG---------PVSQIDCGSYHTLAYVYTT 312
Query: 247 GEVYTWG 253
G+V ++G
Sbjct: 313 GQVVSFG 319
>gi|431917309|gb|ELK16842.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
Length = 3660
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 177/408 (43%), Gaps = 63/408 (15%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
++ ++VWG N Q G L+ K P + N+ + +A G + AV
Sbjct: 1793 RTKVFVWGLNDKDQLG------GLKGSKIKVPSFSETLSALNA--VQVAGGSKSLFAVTV 1844
Query: 80 DGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPREN 135
+G ++ G G+LG G G P +V L S VK ++ G H TA A+
Sbjct: 1845 EGKVYACGEATNGRLGLGVSSGTVPVPRQVTALSSYVVKKVAVHSGGRHATALTAD---- 1900
Query: 136 DGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
+++ WG+ PRL + I ++CGS H AL+
Sbjct: 1901 ------GKVFSWGEGDDGKLGHFSRXNCDKPRLIEALKSRR--IRDIACGSSHSAALTSS 1952
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAV 243
G L WG EYG+LG G L+ P+++K ++ QV+CG + + A+
Sbjct: 1953 GELYTWGLGEYGRLGHGDNTTQLK-PKMVKVLVG--------HRVVQVACGSRDAQTLAL 2003
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
++ G V++WG G G+LG + + +P+ + L+G + + CG S ALT G
Sbjct: 2004 TDEGLVFSWGDGDFGKLGRGGSEGCN---VPQNIERLNGQGVCQIECGAQFSLALTKSGV 2060
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLVYM 361
++ WG +LG G SD + R ++ G ++V A G H L
Sbjct: 2061 VWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVT 2108
Query: 362 RDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHS 408
G+++ WG N +GQ N +T P+ V G+ + ++A G HS
Sbjct: 2109 DAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 2156
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 147/307 (47%), Gaps = 47/307 (15%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ G H A+ +DG +F+WG + G+LG + P ++ L+S ++ I+CG+ +
Sbjct: 1887 VHSGGRHATALTADGKVFSWGEGDDGKLGHFSRXNCDKPRLIEALKSRRIRDIACGSSHS 1946
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCG 175
AA+ S+ L+ WG + + RL G T P + + QV+CG
Sbjct: 1947 AALT---------SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLVGHRVVQVACG 1994
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S +AL++ GL+ +WG ++G+LGRG EG P+ I E + + Q+
Sbjct: 1995 SRDAQTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNVPQNI--------ERLNGQGVCQI 2045
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G V+TWG G +LGH S K P+ V L G I VA G +
Sbjct: 2046 ECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGAL 2102
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG 353
H A+T G +YAWG + GQ G G T N T + + + VACG
Sbjct: 2103 HCLAVTDAGQVYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACG 2152
Query: 354 HSHTLVY 360
SH++ +
Sbjct: 2153 SSHSVAW 2159
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 135/295 (45%), Gaps = 41/295 (13%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++ WG G+ G R + P L A + R DIACG H+AA
Sbjct: 1897 LTADGKVFSWGEGDDGKLGHFSRXNCDK------PRLI--EALKSRRIRDIACGSSHSAA 1948
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ S G L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 1949 LTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLVGHRVVQVACGSRDAQTLALTDEG- 2007
Query: 137 GTISTSRLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSEC 185
++ WG +F +L G P I +CQ+ CG+ +AL++
Sbjct: 2008 ------LVFSWGDG---DFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKS 2058
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G++ WG +Y +LG G ++ P+V++G +KI V+ G H AV++
Sbjct: 2059 GVVWTWGKGDYFRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTD 2109
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
G+VY WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 2110 AGQVYAWGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 2161
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 143/327 (43%), Gaps = 50/327 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +D+A G H+A V + G
Sbjct: 2896 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRGIEV--VDVAAGGAHSACVTAAGG 2947
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG E + P+ V+ LQ V ++CG+ + D T+
Sbjct: 2948 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLC--LTEDDTV--- 3002
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P + +V CGS VAL++ G + WG
Sbjct: 3003 --WSWGDGDYGKLGRGGSDGCKVPMKVDALTGLGAVKVECGSQFSVALTKSGAVYTWGKG 3060
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 3061 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 3111
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G + VACG H+ AW S+
Sbjct: 3112 NDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAWSTSKPAS 3159
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPIL 341
G P + +P E ++ +++P++
Sbjct: 3160 AGKLP-----AQVPMEY-SHLQDLPVV 3180
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 172/411 (41%), Gaps = 76/411 (18%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG+NH GQ G G E ++++P C A A R + G + AV +DG
Sbjct: 2790 VYGWGHNHRGQLG--GVEGAKVKVPTP-------CEALAALRPAQLIGGEQTLFAVTADG 2840
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 2841 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE------- 2893
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG+ + PR+ + V+ G H ++ G L
Sbjct: 2894 ---GEVYSWGEAEDGKLGHGNRSPCDRPRVIES--LRGIEVVDVAAGGAHSACVTAAGGL 2948
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSEN 246
WG YG+LG + + L+ P+++ EA + ++ V+C G+ + ++E+
Sbjct: 2949 YTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVVDVACGSGDAQTLCLTED 2999
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
V++WG G G+LG D +P +V AL G+ V CG S ALT GA+Y
Sbjct: 3000 DTVWSWGDGDYGKLGR---GGSDGCKVPMKVDALTGLGAVKVECGSQFSVALTKSGAVYT 3056
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTL 358
WG +LG G SD + R P VQ +A G H +
Sbjct: 3057 WGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCV 3098
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
DG ++ WG N GQ + + P V G +V ++A G H+
Sbjct: 3099 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 3149
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 123/253 (48%), Gaps = 30/253 (11%)
Query: 134 ENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N +GS + QV+ GS + A++
Sbjct: 1787 ESAATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNAVQVAGGSKSLFAVTVE 1845
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + A G G+LG G++ + PR + + ++ K V G H+ A++
Sbjct: 1846 GKVYACGEATNGRLGLGVSSGTVPVPRQVTALSSYV------VKKVAVHSGGRHATALTA 1899
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS ALTS G LY
Sbjct: 1900 DGKVFSWGEGDDGKLGHFSRXNCDK---PRLIEALKSRRIRDIACGSSHSAALTSSGELY 1956
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRD 363
WG + G+LG G T L P + + +LV VQ VACG + TL +
Sbjct: 1957 TWGLGEYGRLGHGDNTT--QLKP-------KMVKVLVGHRVVQ-VACGSRDAQTLALTDE 2006
Query: 364 GRIHGWGYNSYGQ 376
G + WG +G+
Sbjct: 2007 GLVFSWGDGDFGK 2019
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 133/310 (42%), Gaps = 53/310 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHC 125
+ G +H A++S+G +++WG E G+LG G P ++ L+ E V + GAH
Sbjct: 2880 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 2939
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCG 175
A L+ WG+ + P+L A + ++ V+CG
Sbjct: 2940 ACVTA----------AGGLYTWGKGRYGRLGHSDSEDQLKPKLV-EALQGHRVV-DVACG 2987
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + L+E + +WG +YG+LGRG +G + P + +V
Sbjct: 2988 SGDAQTLCLTEDDTVWSWGDGDYGKLGRG-GSDGCKVPMKVDALTGL--------GAVKV 3038
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G VYTWG G +LGH S D PR+V L G + +A G +
Sbjct: 3039 ECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSL 3095
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLV 350
H T G +Y WG + GQLG G T P LV V V
Sbjct: 3096 HCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRV 3142
Query: 351 ACGHSHTLVY 360
ACG +HTL +
Sbjct: 3143 ACGSAHTLAW 3152
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 135/342 (39%), Gaps = 34/342 (9%)
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
T + GT++ WG N GQLG K P + L + + G A+
Sbjct: 2781 TLSAGGSGTVYGWGHNHRGQLGGVEGAKVKVPTPCEALAALRPAQLIGGEQTLFAVTA-- 2838
Query: 134 ENDGTISTS-----RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
DG + + G + + P L V+ G H +ALS G +
Sbjct: 2839 --DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 2896
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG E G+LG G PRVI+ ++ V+ G HSA V+ G
Sbjct: 2897 YSWGEAEDGKLGHG-NRSPCDRPRVIESLRGI--------EVVDVAAGGAHSACVTAAGG 2947
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYA 306
+YTWG G G+LGH + +L P+ V AL G + DVACG + LT +++
Sbjct: 2948 LYTWGKGRYGRLGH---SDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTEDDTVWS 3004
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRI 366
WG G+LG G +P + D + G V CG ++ + G +
Sbjct: 3005 WGDGDYGKLGRG--GSDGCKVPMKVDA--------LTGLGAVKVECGSQFSVALTKSGAV 3054
Query: 367 HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGH 407
+ WG Y + + + P V G +V +A G H
Sbjct: 3055 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 3096
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG + G G + +R P+Q+ + + IA G H DG
Sbjct: 3053 AVYTWGKGDYHRLGH-GSDDHVRRPRQVQ-------GLQGKKVIAIATGSLHCVCCTEDG 3104
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
++TWG N+ GQLGDGT + P V LQ + V ++CG+ T A
Sbjct: 3105 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 3151
>gi|410947370|ref|XP_003980422.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Felis catus]
Length = 527
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 110/215 (51%), Gaps = 22/215 (10%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H+V + G + WG+N Y QLG G T GL + + +++T+V+CG
Sbjct: 86 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLMPCHISTNLSN--------KQVTEVACGS 137
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHSC 296
YHS ++ +GEV+ WG + GQ+G S + +PRRV L + ++ACG + S
Sbjct: 138 YHSLVLTSDGEVFAWGYNNSGQVGS---GSTANQPIPRRVTGCLQNKVVVNIACGQMCSM 194
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ + G +Y WG + GQLGLG + + R VQ VACG++H
Sbjct: 195 AVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRISALQGIR----------VQRVACGYAH 244
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
TLV +G+++ WG NSYGQ + YP+PV
Sbjct: 245 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPV 279
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 132/300 (44%), Gaps = 43/300 (14%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTAAIAEPRENDGTIS 140
+F G N G LG G + P ++ L + + +S G+ H A E
Sbjct: 43 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTE--------- 93
Query: 141 TSRLWVWGQNQGSNFPR---------LFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
++ WG N S N + +V+CGS H + L+ G + AW
Sbjct: 94 -GEVFTWGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAW 152
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
GYN GQ+G G T PR + G + + + ++CG+ S AV GEVY
Sbjct: 153 GYNNSGQVGSGSTANQ-PIPRRVTG-------CLQNKVVVNIACGQMCSMAVVNTGEVYV 204
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG GQLG L S + P R+ AL GI ++ VACG H+ LT +G +YAWG +
Sbjct: 205 WGYNGNGQLG---LGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 261
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRIHGWG 370
GQLG G N+S+ + ++ +++ AC +HT + G ++ WG
Sbjct: 262 YGQLGTG----------NKSNQSYPAPVVVEKDRIIEIAACHLAHTSAAKTQGGHVYMWG 311
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 115/243 (47%), Gaps = 39/243 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G +P + L +N + ++ACG H+ + SDG
Sbjct: 96 VFTWGHNAYSQLG-NGTTNHGLMPCHISTNL------SNKQVTEVACGSYHSLVLTSDGE 148
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P +V LQ++ V +I+CG C+ A+ ++T
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAV---------VNT 199
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N N P + + +V+CG H + L++ G + AWG
Sbjct: 200 GEVYVWGYNGNGQLGLGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 259
Query: 194 NEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G + + P V+ E ++I ++ +C H SAA ++ G VY
Sbjct: 260 NSYGQLGTGNKSNQSYPAPVVV-----------EKDRIIEIAACHLAHTSAAKTQGGHVY 308
Query: 251 TWG 253
WG
Sbjct: 309 MWG 311
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 70/154 (45%), Gaps = 19/154 (12%)
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHSCALTSK 301
N E++ G G LG +QS + PRR+ +L G K +AC G H T++
Sbjct: 40 NDEIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLSG---KKIACLSYGSGPHIVLATTE 93
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
G ++ WG + QLG G T + L+P T N V VACG H+LV
Sbjct: 94 GEVFTWGHNAYSQLGNG--TTNHGLMPCHISTNLSN-------KQVTEVACGSYHSLVLT 144
Query: 362 RDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 395
DG + WGYN+ GQ + + P V C+
Sbjct: 145 SDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCL 178
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 20/151 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G Q P A R +ACG+ HT + +G
Sbjct: 202 VYVWGYNGNGQLGLGSSGNQ--------PTPCRISALQGIRVQRVACGYAHTLVLTDEGQ 253
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGTIST 141
++ WGAN +GQLG G + + +P V + ++ +C AH +AA +
Sbjct: 254 VYAWGANSYGQLGTGNKSNQSYPAPVVVEKDRIIEIAACHLAHTSAAKTQG--------- 304
Query: 142 SRLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 305 GHVYMWGQCRGQSVILPHLTHFSCTDDVFAC 335
>gi|356501083|ref|XP_003519358.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 477
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 119/406 (29%), Positives = 175/406 (43%), Gaps = 64/406 (15%)
Query: 51 PELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANE-------FGQLGDGTEEGRK 103
PE F P + + A G H AV G ++TWG E FG+ G +
Sbjct: 92 PEPFPLPT--ETSIVKAAAGWAHCVAVTEHGEVYTWGWKECIPSGKVFGESSTGVSLEKD 149
Query: 104 HPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSN--------- 154
P + L +E V S G+ T A N G ST R V Q +
Sbjct: 150 VPGRHTPLFTEQVSPRSQGSRSTGGTAS--SNSGEESTKRRRVSSAKQTAESSSSSDDSL 207
Query: 155 --FPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPR 212
FP L P I V+ G H +ALS+ GL+ AWGY GQLG G + P
Sbjct: 208 TAFPCLV--TLNPGIRIASVAAGGRHTLALSDTGLVWAWGYGGEGQLGLGSRIRMVSTPH 265
Query: 213 VI-----KGYAKFLDEAPELEK----------------ITQVSCGEYHSAAVSENGEVYT 251
++ Y K D + L + I +++CG HSA +++ G + T
Sbjct: 266 LVPCIDSSYYVK--DRSATLARGNMGSEGQTFRIPGSYIKRIACGGRHSAVITDAGALLT 323
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
+G G GQ C D EL P V +L GI I+ +A G H+ ++ G +YA+GG+Q
Sbjct: 324 FGWGLYGQ---CGQGITDDELSPTCVSSLLGIHIEGIAAGLWHTVCTSADGDVYAFGGNQ 380
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGRIHGWG 370
GQLG G ++++T R + + N + ++CG HT + G++ WG
Sbjct: 381 FGQLGTG---------ADQAETLPRLVDSPSLKNLHAKNISCGARHTALVTEGGKVFCWG 431
Query: 371 YNSYGQAANEKSTYAWYPSPV--DWCVGEVRKLAAGGGHSAVLADA 414
+N YGQ PS V + CV + +A G H+ +LA++
Sbjct: 432 WNKYGQLGLGDVIDRNIPSEVTIEGCV--PKNVACGWWHTLLLAES 475
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 107/315 (33%), Gaps = 111/315 (35%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQG--PRVIKGYAKFLDEAPE 226
+C CG +A+SE G L WG + LG+ G G P P
Sbjct: 52 VCGGGCG--FAIAISESGKLITWGSTD--DLGQSYVTSGKHGETPEPFP--------LPT 99
Query: 227 LEKITQVSCGEYHSAAVSENGEVYTWGL-------------------------------- 254
I + + G H AV+E+GEVYTWG
Sbjct: 100 ETSIVKAAAGWAHCVAVTEHGEVYTWGWKECIPSGKVFGESSTGVSLEKDVPGRHTPLFT 159
Query: 255 --------GSVGQLGHCSLQSGDKELLPRRV-----------------------VALD-G 282
GS G S SG++ RRV V L+ G
Sbjct: 160 EQVSPRSQGSRSTGGTASSNSGEESTKRRRVSSAKQTAESSSSSDDSLTAFPCLVTLNPG 219
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
I I VA GG H+ AL+ G ++AWG GQLGLG + R S
Sbjct: 220 IRIASVAAGGRHTLALSDTGLVWAWGYGGEGQLGLGSRIRMVST---------------- 263
Query: 343 VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLA 402
LV C S V R + S GQ +Y ++++A
Sbjct: 264 ----PHLVPCIDSSYYVKDRSATLARGNMGSEGQTFRIPGSY-------------IKRIA 306
Query: 403 AGGGHSAVLADACSL 417
GG HSAV+ DA +L
Sbjct: 307 CGGRHSAVITDAGAL 321
>gi|410947368|ref|XP_003980421.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Felis catus]
Length = 551
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 110/215 (51%), Gaps = 22/215 (10%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H+V + G + WG+N Y QLG G T GL + + +++T+V+CG
Sbjct: 110 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLMPCHISTNLSN--------KQVTEVACGS 161
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHSC 296
YHS ++ +GEV+ WG + GQ+G S + +PRRV L + ++ACG + S
Sbjct: 162 YHSLVLTSDGEVFAWGYNNSGQVGS---GSTANQPIPRRVTGCLQNKVVVNIACGQMCSM 218
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ + G +Y WG + GQLGLG + + R VQ VACG++H
Sbjct: 219 AVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRISALQGIR----------VQRVACGYAH 268
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
TLV +G+++ WG NSYGQ + YP+PV
Sbjct: 269 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPV 303
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 132/300 (44%), Gaps = 43/300 (14%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTAAIAEPRENDGTIS 140
+F G N G LG G + P ++ L + + +S G+ H A E
Sbjct: 67 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTE--------- 117
Query: 141 TSRLWVWGQNQGSNFPR---------LFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
++ WG N S N + +V+CGS H + L+ G + AW
Sbjct: 118 -GEVFTWGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAW 176
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
GYN GQ+G G T PR + G + + + ++CG+ S AV GEVY
Sbjct: 177 GYNNSGQVGSGSTANQ-PIPRRVTG-------CLQNKVVVNIACGQMCSMAVVNTGEVYV 228
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG GQLG L S + P R+ AL GI ++ VACG H+ LT +G +YAWG +
Sbjct: 229 WGYNGNGQLG---LGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 285
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRIHGWG 370
GQLG G N+S+ + ++ +++ AC +HT + G ++ WG
Sbjct: 286 YGQLGTG----------NKSNQSYPAPVVVEKDRIIEIAACHLAHTSAAKTQGGHVYMWG 335
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 115/243 (47%), Gaps = 39/243 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G +P + L +N + ++ACG H+ + SDG
Sbjct: 120 VFTWGHNAYSQLG-NGTTNHGLMPCHISTNL------SNKQVTEVACGSYHSLVLTSDGE 172
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P +V LQ++ V +I+CG C+ A+ ++T
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAV---------VNT 223
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N N P + + +V+CG H + L++ G + AWG
Sbjct: 224 GEVYVWGYNGNGQLGLGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 283
Query: 194 NEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G + + P V+ E ++I ++ +C H SAA ++ G VY
Sbjct: 284 NSYGQLGTGNKSNQSYPAPVVV-----------EKDRIIEIAACHLAHTSAAKTQGGHVY 332
Query: 251 TWG 253
WG
Sbjct: 333 MWG 335
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 70/154 (45%), Gaps = 19/154 (12%)
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHSCALTSK 301
N E++ G G LG +QS + PRR+ +L G K +AC G H T++
Sbjct: 64 NDEIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLSG---KKIACLSYGSGPHIVLATTE 117
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
G ++ WG + QLG G T + L+P T N V VACG H+LV
Sbjct: 118 GEVFTWGHNAYSQLGNG--TTNHGLMPCHISTNLSN-------KQVTEVACGSYHSLVLT 168
Query: 362 RDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 395
DG + WGYN+ GQ + + P V C+
Sbjct: 169 SDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCL 202
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 20/151 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G Q P A R +ACG+ HT + +G
Sbjct: 226 VYVWGYNGNGQLGLGSSGNQ--------PTPCRISALQGIRVQRVACGYAHTLVLTDEGQ 277
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGTIST 141
++ WGAN +GQLG G + + +P V + ++ +C AH +AA +
Sbjct: 278 VYAWGANSYGQLGTGNKSNQSYPAPVVVEKDRIIEIAACHLAHTSAAKTQG--------- 328
Query: 142 SRLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 329 GHVYMWGQCRGQSVILPHLTHFSCTDDVFAC 359
>gi|110637510|ref|YP_677717.1| alpha-tubulin suppressor [Cytophaga hutchinsonii ATCC 33406]
gi|110280191|gb|ABG58377.1| alpha-tubulin suppressor [Cytophaga hutchinsonii ATCC 33406]
Length = 911
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 165/387 (42%), Gaps = 66/387 (17%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WGYN +GQ G G R P ++ G + W+ +A G +T A+ +DGT
Sbjct: 140 LWGWGYNSNGQLG-DGTTMDRRTPVKI---------GIDINWVAVATGSSYTLALKADGT 189
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L++WG N+ GQLGDGT R P ++ Q+ T A G +
Sbjct: 190 LWSWGKNQRGQLGDGTTIDRHSPVQIGTEQT-----------WTGIAACFSSGIGIKANG 238
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVS---------CGSVHVVALSECGLLQAWGY 193
LW WG N G L G QV GS H+VAL G L WG
Sbjct: 239 TLWTWGFNNGG---ELGIGNNDEKHTPVQVGADQNWLYAVAGSNHIVALKVDGSLWGWGL 295
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
NE G++G G T + RV T ++ G H+ A+ NG ++ WG
Sbjct: 296 NEAGEIGNGNTVQQDSPVRV-----------GTDNDWTTLAAGSNHTLAIKSNGTLWAWG 344
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
G LG+ + + D LP + V D +I+ V+ G HS AL + G L+AWG + G
Sbjct: 345 HNVRGNLGNGT-ATLDPATLPVQ-VGTDADWIR-VSAGLDHSVALKANGTLWAWGYNVRG 401
Query: 314 QLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQLVACGHSHTLVYMRDGRIHGWGYN 372
QLG G T +++P+ + + + G HT+ DG + WG N
Sbjct: 402 QLGYGSGTD-------------KHLPVQIGTAHTWVAINAGTYHTIGVKADGSLWTWGDN 448
Query: 373 SYGQ-----AANEKSTYAWYPSPVDWC 394
+ Q A++ ++ +P DW
Sbjct: 449 TNAQLGDGGTADQPVPHSIRTAPDDWI 475
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 105/370 (28%), Positives = 157/370 (42%), Gaps = 62/370 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++ WGYN GQ G G +P Q+ G W+ I G HT
Sbjct: 386 LKANGTLWAWGYNVRGQLGY-GSGTDKHLPVQI---------GTAHTWVAINAGTYHTIG 435
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V +DG+L+TWG N QLGDG + P ++ +++ + A A +
Sbjct: 436 VKADGSLWTWGDNTNAQLGDGGTADQPVPHSIRTAPDDWISIAASNAFSMGLKA-----N 490
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTII--------CQVSCGSVHVVALSECGLL 188
GTI W WG N P G + ++ + ++ GS +++AL G L
Sbjct: 491 GTI-----WTWGLN-----PFETDGQYKNSSPVQTGSDQNWKSIATGSNYILALKADGTL 540
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
AWG N GQLG +G + PR++ K + A I S S + +G
Sbjct: 541 WAWGDNFSGQLG-----DGTEQPRMLP---KQIGTATTWVSIAAASG--VQSFGIQADGS 590
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGIFIKDVACGGVHSCALTSKGALYAW 307
+++WG G+LG L + K L+P RV D I IK G H+ + S G L+ W
Sbjct: 591 LWSWGHNYDGELG---LGTNLKTLVPTRVGTGTDWISIK---TGVGHTLGIKSDGTLWGW 644
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G ++ GQLG G + + +D + NI A G H + +G +
Sbjct: 645 GTNRQGQLGDGTLVNKYVPVQLGTDRDWINI------------AGGTIHNICLKSNGTLW 692
Query: 368 GWGYNSYGQA 377
WG N+YGQ
Sbjct: 693 AWGRNNYGQV 702
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 148/372 (39%), Gaps = 67/372 (18%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I A ++ WG+N+ G+ G G + P Q+ GA+ WL G H A
Sbjct: 234 IKANGTLWTWGFNNGGELG-IGNNDEKHTPVQV---------GADQNWLYAVAGSNHIVA 283
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG+L+ WG NE G++G+G + P +V +++ G++ T AI
Sbjct: 284 LKVDGSLWGWGLNEAGEIGNGNTVQQDSPVRVGT--DNDWTTLAAGSNHTLAIK------ 335
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQV---------SCGSVHVVALSECGL 187
S LW WG N N P T+ QV S G H VAL G
Sbjct: 336 ---SNGTLWAWGHNVRGNLGNGT-ATLDPATLPVQVGTDADWIRVSAGLDHSVALKANGT 391
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLD-EAPELEKITQVSCGEYHSAAVSEN 246
L AWGYN GQLG G G K L + ++ G YH+ V +
Sbjct: 392 LWAWGYNVRGQLGYG------------SGTDKHLPVQIGTAHTWVAINAGTYHTIGVKAD 439
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
G ++TWG + QLG + +P + +I +A S L + G ++
Sbjct: 440 GSLWTWGDNTNAQLGDGGTA---DQPVPHSIRTAPDDWIS-IAASNAFSMGLKANGTIWT 495
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI-PILVVPN-GVQLVACGHSHTLVYMRDG 364
WG L P E+D ++N P+ + + +A G ++ L DG
Sbjct: 496 WG-----------------LNPFETDGQYKNSSPVQTGSDQNWKSIATGSNYILALKADG 538
Query: 365 RIHGWGYNSYGQ 376
+ WG N GQ
Sbjct: 539 TLWAWGDNFSGQ 550
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 131/317 (41%), Gaps = 45/317 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A I+ WG N G+ ++ G++ W IA G + A
Sbjct: 487 LKANGTIWTWGLNPFETDGQYKNSSPVQ-------------TGSDQNWKSIATGSNYILA 533
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ +DGTL+ WG N GQLGDGTE+ R P+++ + + A A ++
Sbjct: 534 LKADGTLWAWGDNFSGQLGDGTEQPRMLPKQIG----------TATTWVSIAAASGVQSF 583
Query: 137 GTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
G + LW WG N G+N L T + G H + + G L
Sbjct: 584 GIQADGSLWSWGHNYDGELGLGTNLKTLVPTRVGTGTDWISIKTGVGHTLGIKSDGTLWG 643
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG N GQLG G ++ Y + ++ G H+ + NG ++
Sbjct: 644 WGTNRQGQLGDG---------TLVNKYVPV--QLGTDRDWINIAGGTIHNICLKSNGTLW 692
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
WG + GQ+G +L + D+ + ++ + +I DV S A+ + G+L+A G +
Sbjct: 693 AWGRNNYGQVGTGNLITQDRMVQ----ISAEQNWI-DVYASLDQSFAIRADGSLWACGLN 747
Query: 311 QAGQLGLGPQTRSFSLI 327
+GQLG G +++
Sbjct: 748 SSGQLGDGTSVDRAAMV 764
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 142/335 (42%), Gaps = 60/335 (17%)
Query: 56 CPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
P AN + + +H+ + S G L+ WG N GQLGDGT R+ P K+ + +
Sbjct: 114 VPYTANYQRMATGNNSDHSFEIRS-GELWGWGYNSNGQLGDGTTMDRRTPVKIG-IDINW 171
Query: 116 VKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTII 169
V +++ G+ T A+ + DGT LW WG+NQ G+ R +P I
Sbjct: 172 V-AVATGSSYTLAL----KADGT-----LWSWGKNQRGQLGDGTTIDR-----HSPVQIG 216
Query: 170 CQVSCGSVHV-----VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
+ + + + + G L WG+N G+LG G E P + +L
Sbjct: 217 TEQTWTGIAACFSSGIGIKANGTLWTWGFNNGGELGIGNNDE-KHTPVQVGADQNWL--- 272
Query: 225 PELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF 284
G H A+ +G ++ WGL G++G+ + D P R V D +
Sbjct: 273 -------YAVAGSNHIVALKVDGSLWGWGLNEAGEIGNGNTVQQDS---PVR-VGTDNDW 321
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDT---YFRNIPIL 341
+A G H+ A+ S G L+AWG + G LG G T + +P + T + R
Sbjct: 322 TT-LAAGSNHTLAIKSNGTLWAWGHNVRGNLGNGTATLDPATLPVQVGTDADWIR----- 375
Query: 342 VVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
V+ G H++ +G + WGYN GQ
Sbjct: 376 --------VSAGLDHSVALKANGTLWAWGYNVRGQ 402
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 98/239 (41%), Gaps = 44/239 (18%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I A +++ WG+N+ G+ G G + +P ++ G + W+ I G HT
Sbjct: 585 IQADGSLWSWGHNYDGELGL-GTNLKTLVPTRV---------GTGTDWISIKTGVGHTLG 634
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ SDGTL+ WG N GQLGDGT + P ++ +++ H N
Sbjct: 635 IKSDGTLWGWGTNRQGQLGDGTLVNKYVPVQLGT-DRDWINIAGGTIH----------NI 683
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHV---------VALSECGL 187
S LW WG+N N+ ++ G + Q+S + A+ G
Sbjct: 684 CLKSNGTLWAWGRN---NYGQVGTGNLITQDRMVQISAEQNWIDVYASLDQSFAIRADGS 740
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
L A G N GQLG G + + + V G +K ++ G YH+ A+ N
Sbjct: 741 LWACGLNSSGQLGDGTSVD--RAAMVAVGTN---------QKWISLAAGNYHTLALPVN 788
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 14/122 (11%)
Query: 14 VDNIPAKS--AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGH 71
+ NI KS ++ WG N+ GQ G Q R+ + A W+D+
Sbjct: 680 IHNICLKSNGTLWAWGRNNYGQVGTGNLITQDRMVQ----------ISAEQNWIDVYASL 729
Query: 72 EHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
+ + A+ +DG+L+ G N GQLGDGT R V Q S++ G + T A+
Sbjct: 730 DQSFAIRADGSLWACGLNSSGQLGDGTSVDRAAMVAVGTNQKWI--SLAAGNYHTLALPV 787
Query: 132 PR 133
R
Sbjct: 788 NR 789
>gi|163847891|ref|YP_001635935.1| chromosome condensation regulator RCC1 [Chloroflexus aurantiacus
J-10-fl]
gi|222525767|ref|YP_002570238.1| chromosome condensation regulator RCC1 [Chloroflexus sp. Y-400-fl]
gi|163669180|gb|ABY35546.1| regulator of chromosome condensation RCC1 [Chloroflexus aurantiacus
J-10-fl]
gi|222449646|gb|ACM53912.1| regulator of chromosome condensation RCC1 [Chloroflexus sp.
Y-400-fl]
Length = 790
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 123/444 (27%), Positives = 180/444 (40%), Gaps = 84/444 (18%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + WG N SGQ G + +IP P ++ G DI G EHT A
Sbjct: 133 LTTNGGVKCWGANVSGQLGN-----ETQIPYSAPVDVVELGRGV----FDITAGWEHTCA 183
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ + G + WG N GQLGDGT R P V L+S V +I+ G T A+
Sbjct: 184 LTTGGGVKCWGDNSSGQLGDGTTNDRNTPVDVAGLESG-VAAIAAGEGHTCALT------ 236
Query: 137 GTISTSRLWVWGQN-QGSNFPRLFWGAFTPNTI------ICQVSCGSVHVVALSECGLLQ 189
++ + WG N +G + TP + + ++ G H AL+ G ++
Sbjct: 237 ---TSGGVKCWGDNLEGQLGGGTIYSHITPVDVAGLESDVAAIAVGWEHTCALTTVGGVR 293
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
WG N GQLG G E R + L+ +T ++ G H+ A++ G V
Sbjct: 294 CWGNNSSGQLGDGTMTE-----RNVPVGVIGLESG-----VTAITAGGGHTCALTTGGGV 343
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
WG GQLG+ + + +P V L GI + +A GG H+CALT+ G + WG
Sbjct: 344 KCWGNNFYGQLGNVTAH---QPGIPVDVAGL-GIGVVAIAAGGAHTCALTTSGGVKCWGY 399
Query: 310 SQAGQLGLGPQT--------------------------------------RSFSLIPNES 331
+ QLG G T R+F+ +
Sbjct: 400 NYDVQLGDGTTTARSTPVDVSGLESDVVTITAGGAHTCALTTSGGVKCWGRNFNFQLGDG 459
Query: 332 DTYFRNIPILVVPNG--VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPS 389
RN P+ V+ G V + G +HT + WG N YGQ + T +Y +
Sbjct: 460 TMIDRNTPVDVIGLGSRVTAITAGGNHTCALTTSDGVKCWGSNLYGQLGH--GTMNFYGT 517
Query: 390 PVDWC--VGEVRKLAAGGGHSAVL 411
PVD G+V +AAG H+ L
Sbjct: 518 PVDVIGLNGDVTAIAAGWWHTCAL 541
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 170/388 (43%), Gaps = 57/388 (14%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
IA G HT A+ + G + WG N GQLGDGT R P V L+S V +I+ G T
Sbjct: 72 IATGRYHTCALTTGGGVKCWGDNSSGQLGDGTMNDRNTPVDVVGLESG-VAAIAAGGSHT 130
Query: 127 AAIAEPRENDGTISTSRLWVWGQN---QGSNFPRLFWGAFTPNTI------ICQVSCGSV 177
A+ + + WG N Q N ++ + A P + + ++ G
Sbjct: 131 CALT---------TNGGVKCWGANVSGQLGNETQIPYSA--PVDVVELGRGVFDITAGWE 179
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H AL+ G ++ WG N GQLG G T + +D A + ++ GE
Sbjct: 180 HTCALTTGGGVKCWGDNSSGQLGDGTTND----------RNTPVDVAGLESGVAAIAAGE 229
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
H+ A++ +G V WG GQLG ++ S + P V L+ + +A G H+CA
Sbjct: 230 GHTCALTTSGGVKCWGDNLEGQLGGGTIYS---HITPVDVAGLES-DVAAIAVGWEHTCA 285
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV--PNGVQLVACGHS 355
LT+ G + WG + +GQLG G T RN+P+ V+ +GV + G
Sbjct: 286 LTTVGGVRCWGNNSSGQLGDGTMTE-------------RNVPVGVIGLESGVTAITAGGG 332
Query: 356 HTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADAC 415
HT G + WG N YGQ N + P V V +AAGG H+ L +
Sbjct: 333 HTCALTTGGGVKCWGNNFYGQLGNVTAHQPGIPVDVAGLGIGVVAIAAGGAHTCALTTSG 392
Query: 416 SLKELC-----EFRLAESVTLSNASEIE 438
+K C + +L + T + ++ ++
Sbjct: 393 GVK--CWGYNYDVQLGDGTTTARSTPVD 418
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 114/407 (28%), Positives = 166/407 (40%), Gaps = 58/407 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+ WG N GQ G Q IP + G A IA G HT A+ + G
Sbjct: 343 VKCWGNNFYGQLGNV-TAHQPGIPVDVAGLGIGVVA--------IAAGGAHTCALTTSGG 393
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ WG N QLGDGT R P V L+S+ V + GAH A ++
Sbjct: 394 VKCWGYNYDVQLGDGTTTARSTPVDVSGLESDVVTITAGGAHTCAL----------TTSG 443
Query: 143 RLWVWGQNQGSNFPRLFWGAF----TPNTII------CQVSCGSVHVVALSECGLLQAWG 192
+ WG+N NF +L G TP +I ++ G H AL+ ++ WG
Sbjct: 444 GVKCWGRN--FNF-QLGDGTMIDRNTPVDVIGLGSRVTAITAGGNHTCALTTSDGVKCWG 500
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
N YGQLG G + Y +D +T ++ G +H+ A+ +G V W
Sbjct: 501 SNLYGQLGHG----------TMNFYGTPVDVIGLNGDVTAIAAGWWHTCALMTDGGVKCW 550
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G GQLG + D+ +P V L G + + G H+CALT+ G + WG + +
Sbjct: 551 GANDSGQLGDGTRS--DRS-IPVDVSGL-GSGVAAITAGLFHTCALTTSGGVKCWGSNSS 606
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR-DGRIHGWGY 371
Q LG T IP + + + +GV + G HT ++ WG
Sbjct: 607 WQ--LGNITVGQPYIP---------VDVFGLWSGVTAITAGLHHTCALTTGSAQVQCWGG 655
Query: 372 NSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSLK 418
N GQ + + +P V G +AAGG H+ L + +K
Sbjct: 656 NYDGQLGDGTTNLRRFPQTVIGLEGSETAIAAGGAHTCALTVSGGMK 702
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 113/435 (25%), Positives = 178/435 (40%), Gaps = 68/435 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+ WG N SGQ G + P ++ G +G + IA G HT A+ ++G
Sbjct: 88 VKCWGDNSSGQLGDGTMND-----RNTPVDVVGLESGVAA----IAAGGSHTCALTTNGG 138
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ WGAN GQLG+ T+ P V +L V I+ G T A+ +
Sbjct: 139 VKCWGANVSGQLGNETQIPYSAPVDVVEL-GRGVFDITAGWEHTCALT---------TGG 188
Query: 143 RLWVWGQN------QGSNFPRLFWGAFTPNTI------ICQVSCGSVHVVALSECGLLQA 190
+ WG N G+ R TP + + ++ G H AL+ G ++
Sbjct: 189 GVKCWGDNSSGQLGDGTTNDR-----NTPVDVAGLESGVAAIAAGEGHTCALTTSGGVKC 243
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG N GQLG G I + +D A + ++ G H+ A++ G V
Sbjct: 244 WGDNLEGQLGGG----------TIYSHITPVDVAGLESDVAAIAVGWEHTCALTTVGGVR 293
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
WG S GQLG ++ + +P V+ L+ + + GG H+CALT+ G + WG +
Sbjct: 294 CWGNNSSGQLGDGTMT---ERNVPVGVIGLES-GVTAITAGGGHTCALTTGGGVKCWGNN 349
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLVYMRDGRIHG 368
GQLG + IP+ V G+ +V A G +HT G +
Sbjct: 350 FYGQLG-------------NVTAHQPGIPVDVAGLGIGVVAIAAGGAHTCALTTSGGVKC 396
Query: 369 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSLK---ELCEFRL 425
WGYN Q + +T P V +V + AGG H+ L + +K F+L
Sbjct: 397 WGYNYDVQLGDGTTTARSTPVDVSGLESDVVTITAGGAHTCALTTSGGVKCWGRNFNFQL 456
Query: 426 AESVTLSNASEIEDV 440
+ + + ++ +
Sbjct: 457 GDGTMIDRNTPVDVI 471
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 112/436 (25%), Positives = 169/436 (38%), Gaps = 107/436 (24%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + WGYN+ Q G G P + +G S + I G HT A
Sbjct: 388 LTTSGGVKCWGYNYDVQLG-DGTTTARSTPVDV--------SGLESDVVTITAGGAHTCA 438
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ + G + WG N QLGDGT R P V L S V +I+ G + T A+
Sbjct: 439 LTTSGGVKCWGRNFNFQLGDGTMIDRNTPVDVIGLGSR-VTAITAGGNHTCALT------ 491
Query: 137 GTISTSRLWVWGQN---QGSNFPRLFWGAFTP------NTIICQVSCGSVHVVALSECGL 187
++ + WG N Q + F+G TP N + ++ G H AL G
Sbjct: 492 ---TSDGVKCWGSNLYGQLGHGTMNFYG--TPVDVIGLNGDVTAIAAGWWHTCALMTDGG 546
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
++ WG N+ GQLG +G + R I +D + + ++ G +H+ A++ +G
Sbjct: 547 VKCWGANDSGQLG-----DGTRSDRSIP-----VDVSGLGSGVAAITAGLFHTCALTTSG 596
Query: 248 EVYTWGLGSVGQLGH-----------------------------CSLQSGDKEL------ 272
V WG S QLG+ C+L +G ++
Sbjct: 597 GVKCWGSNSSWQLGNITVGQPYIPVDVFGLWSGVTAITAGLHHTCALTTGSAQVQCWGGN 656
Query: 273 --------------LPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLG 318
P+ V+ L+G +A GG H+CALT G + WG + GQLG G
Sbjct: 657 YDGQLGDGTTNLRRFPQTVIGLEGSETA-IAAGGAHTCALTVSGGMKCWGDNFYGQLGDG 715
Query: 319 PQTRSFSLIPNESDTYFRNIPILVV--PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+ R+ P+ V+ + V +A G HT D + WG N Y Q
Sbjct: 716 SM-------------HDRSTPVDVIRLESNVDAIAAGFFHTCALTTDKGVKCWGDNFYAQ 762
Query: 377 AANEKSTYAWYPSPVD 392
+ + W PVD
Sbjct: 763 LGDGRP--LWRSVPVD 776
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 99/218 (45%), Gaps = 26/218 (11%)
Query: 208 LQGPRVIKGYAKFLDEA-------PELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQL 260
LQ P GY F+ + P L IT ++ G YH+ A++ G V WG S GQL
Sbjct: 44 LQNP----GYQPFVTDTTIHMTSLPSLRNITAIATGRYHTCALTTGGGVKCWGDNSSGQL 99
Query: 261 GHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQ 320
G ++ D+ P VV L+ + +A GG H+CALT+ G + WG + +GQLG Q
Sbjct: 100 GDGTMN--DRN-TPVDVVGLES-GVAAIAAGGSHTCALTTNGGVKCWGANVSGQLGNETQ 155
Query: 321 TRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANE 380
IP Y + ++ + GV + G HT G + WG NS GQ +
Sbjct: 156 ------IP-----YSAPVDVVELGRGVFDITAGWEHTCALTTGGGVKCWGDNSSGQLGDG 204
Query: 381 KSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSLK 418
+ P V V +AAG GH+ L + +K
Sbjct: 205 TTNDRNTPVDVAGLESGVAAIAAGEGHTCALTTSGGVK 242
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 104/246 (42%), Gaps = 31/246 (12%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I ++ G H AL+ G ++ WG N GQLG G T P + G
Sbjct: 69 ITAIATGRYHTCALTTGGGVKCWGDNSSGQLGDG-TMNDRNTPVDVVGLE---------S 118
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD-GIFIKD 287
+ ++ G H+ A++ NG V WG GQLG+ ++ P VV L G+F D
Sbjct: 119 GVAAIAAGGSHTCALTTNGGVKCWGANVSGQLGN---ETQIPYSAPVDVVELGRGVF--D 173
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPN 345
+ G H+CALT+ G + WG + +GQLG + T RN P+ V + +
Sbjct: 174 ITAGWEHTCALTTGGGVKCWGDNSSGQLG-------------DGTTNDRNTPVDVAGLES 220
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGG 405
GV +A G HT G + WG N GQ P V +V +A G
Sbjct: 221 GVAAIAAGEGHTCALTTSGGVKCWGDNLEGQLGGGTIYSHITPVDVAGLESDVAAIAVGW 280
Query: 406 GHSAVL 411
H+ L
Sbjct: 281 EHTCAL 286
>gi|23503098|sp|Q92834.2|RPGR_HUMAN RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
Flags: Precursor
gi|119579846|gb|EAW59442.1| retinitis pigmentosa GTPase regulator, isoform CRA_b [Homo sapiens]
Length = 1020
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 161/354 (45%), Gaps = 49/354 (13%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIP---KQLPPELFGCPAGANSRWLDIACGHEH 73
+ + +Y++G N+ GQ G G + + P K L PE ACG H
Sbjct: 50 VTGNNKLYMFGSNNWGQLGL-GSKSAISKPTCVKALKPEKVKL----------AACGRNH 98
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF-VKSISCGAHCTAAIAEP 132
T G ++ G N GQLG G E R + SE +K +S G++ +AA+ E
Sbjct: 99 TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTE- 157
Query: 133 RENDGTISTSRLWVWGQN-QGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECG 186
DG RL++WG N +G + P + + +SCG H ++ G
Sbjct: 158 ---DG-----RLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDG 209
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
L +G E G+LG + + L R + + E PE K+ QV+CG H+ ++EN
Sbjct: 210 ELYVFGEPENGKLG--LPNQLLGNHRT----PQLVSEIPE--KVIQVACGGEHTVVLTEN 261
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
VYT+GLG GQLG + E P+ + + I ++CG H+ +T G +Y
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSE--PKVIENIRDQTISYISCGENHTALITDIGLMYT 318
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+G + G+LGLG + + IP + R I V+LVACG H +V+
Sbjct: 319 FGDGRHGKLGLGLENFTNHFIPTLCSNFLRFI--------VKLVACGGCHMVVF 364
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 178/393 (45%), Gaps = 51/393 (12%)
Query: 43 LRIPKQLPPE-----LFGCPAGA----------NSRWLDIACGHEHTAAVASDGTLFTWG 87
+R P++L P+ FG A N + ++CG EH+A V + L+ +G
Sbjct: 1 MREPEELMPDSGAVFTFGKSKFAENNPGKFWFKNDVPVHLSCGDEHSAVVTGNNKLYMFG 60
Query: 88 ANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE--NDGTISTSRLW 145
+N +GQLG G++ P VK L+ E VK +CG + T E G + +L
Sbjct: 61 SNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLG 120
Query: 146 VWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITC 205
+ + + F + + FT I Q+S GS AL+E G L WG N GQ+G
Sbjct: 121 LGDTEERNTFHVISF--FTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVS 178
Query: 206 EGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSL 265
+V G + ++ +SCG YHSA V+ +GE+Y +G G+LG +
Sbjct: 179 NVCVPQQVTIG-----------KPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQ 227
Query: 266 QSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP---QTR 322
G+ P+ V + I+ VACGG H+ LT + A+Y +G Q GQLGLG +T
Sbjct: 228 LLGNHR-TPQLVSEIPEKVIQ-VACGGEHTVVLT-ENAVYTFGLGQFGQLGLGTFLFETS 284
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ--AANE 380
+I N D + ++CG +HT + G ++ +G +G+ E
Sbjct: 285 EPKVIENIRD------------QTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLE 332
Query: 381 KSTYAWYPSPVDWCVGEVRKLAA-GGGHSAVLA 412
T + P+ + + KL A GG H V A
Sbjct: 333 NFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFA 365
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 121/284 (42%), Gaps = 51/284 (17%)
Query: 144 LWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
++ +G+++ N P FW N + +SCG H ++ L +G N +GQLG G
Sbjct: 14 VFTFGKSKFAENNPGKFWFK---NDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLG 70
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
+ + P +K A + EK+ +CG H+ +E G VY G + GQLG
Sbjct: 71 -SKSAISKPTCVK--------ALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGL 121
Query: 263 CSLQSGDKELLPRRVVALDGIF-----IKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GD E R + F IK ++ G S ALT G L+ WG + GQ+GL
Sbjct: 122 -----GDTE--ERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGL 174
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQL------VACGHSHTLVYMRDGRIHGWGY 371
+N+ + VP V + ++CG+ H+ DG ++ +G
Sbjct: 175 ------------------KNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVFGE 216
Query: 372 NSYGQAANEKSTYAWYPSP--VDWCVGEVRKLAAGGGHSAVLAD 413
G+ + +P V +V ++A GG H+ VL +
Sbjct: 217 PENGKLGLPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTE 260
>gi|356551654|ref|XP_003544189.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 477
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 119/406 (29%), Positives = 177/406 (43%), Gaps = 64/406 (15%)
Query: 51 PELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANE-------FGQLGDGTEEGRK 103
PE F P A+ + A G H AV G ++TWG E FG+ G +
Sbjct: 92 PEPFPLPTEASI--VKAAAGWAHCVAVTEHGAVYTWGWKECIPSGRVFGEPSTGVSLEKD 149
Query: 104 HPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSN--------- 154
P + Q+ +E V S G+ T A N G ST R V Q +
Sbjct: 150 VPGRHSQVSTEQVSPRSQGSRSTGGTAS--SNSGEESTKRRRVSSAKQTAESSSSSDDSL 207
Query: 155 --FPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPR 212
FP L P I V+ G H +ALS+ GL+ AWGY GQLG G + P
Sbjct: 208 TAFPCLV--TLNPGIRIASVAAGGRHTLALSDTGLVWAWGYGGEGQLGLGSRIRMVSTPH 265
Query: 213 VI-----KGYAKFLDEAPELEK----------------ITQVSCGEYHSAAVSENGEVYT 251
++ Y+K D + L + I +++CG HSA +++ G + T
Sbjct: 266 LVPCIDSSYYSK--DRSATLARGNMDSEGQTFRVPGSYIKRIACGGRHSAVITDAGALLT 323
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
+G G GQ C D EL P V ++ GI I+ VA G H+ ++ G +YA+G +Q
Sbjct: 324 FGWGLYGQ---CGQGITDDELSPTCVSSILGIHIERVAAGLWHTVCTSADGDVYAFGENQ 380
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGRIHGWG 370
GQLG G ++++T R + + N + ++CG HT + G++ WG
Sbjct: 381 FGQLGTG---------ADQAETLPRLLDSPSLDNLRAKNISCGARHTALVTEGGKVFCWG 431
Query: 371 YNSYGQAANEKSTYAWYPSPV--DWCVGEVRKLAAGGGHSAVLADA 414
+N YGQ PS V + CV + +A G H+ +LA++
Sbjct: 432 WNKYGQLGLGDVIDRNIPSEVIIEGCV--PKNVACGWWHTLLLAES 475
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 118/323 (36%), Gaps = 93/323 (28%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+C CG +A+SE G L WG + LG+ G G + F P
Sbjct: 52 VCGGGCG--FAIAISESGKLITWGSTD--DLGQSYVTSGKHG----ETPEPF--PLPTEA 101
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGL---------------------------------- 254
I + + G H AV+E+G VYTWG
Sbjct: 102 SIVKAAAGWAHCVAVTEHGAVYTWGWKECIPSGRVFGEPSTGVSLEKDVPGRHSQVSTEQ 161
Query: 255 ------GSVGQLGHCSLQSGDKELLPRRV-----------------------VALD-GIF 284
GS G S SG++ RRV V L+ GI
Sbjct: 162 VSPRSQGSRSTGGTASSNSGEESTKRRRVSSAKQTAESSSSSDDSLTAFPCLVTLNPGIR 221
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFS---LIPNESDTYFRNIPIL 341
I VA GG H+ AL+ G ++AWG GQLGLG + R S L+P +Y+
Sbjct: 222 IASVAAGGRHTLALSDTGLVWAWGYGGEGQLGLGSRIRMVSTPHLVPCIDSSYYSKDRSA 281
Query: 342 VVPNG---------------VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAW 386
+ G ++ +ACG H+ V G + +G+ YGQ +
Sbjct: 282 TLARGNMDSEGQTFRVPGSYIKRIACGGRHSAVITDAGALLTFGWGLYGQCGQGITDDEL 341
Query: 387 YPSPVDWCVG-EVRKLAAGGGHS 408
P+ V +G + ++AAG H+
Sbjct: 342 SPTCVSSILGIHIERVAAGLWHT 364
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A +Y +G N GQ G + + P L P+ N R +I+CG HTA V
Sbjct: 369 ADGDVYAFGENQFGQLGTGADQAETL------PRLLDSPSLDNLRAKNISCGARHTALVT 422
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
G +F WG N++GQLG G R P +V ++ K+++CG T +AE
Sbjct: 423 EGGKVFCWGWNKYGQLGLGDVIDRNIPSEVI-IEGCVPKNVACGWWHTLLLAE 474
>gi|390479661|ref|XP_002762827.2| PREDICTED: LOW QUALITY PROTEIN: X-linked retinitis pigmentosa
GTPase regulator, partial [Callithrix jacchus]
Length = 817
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 184/411 (44%), Gaps = 58/411 (14%)
Query: 12 RPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGH 71
P + +P A++++G + +I + +P + + N + ++CG
Sbjct: 3 EPGELMPNSGAVFIFGKS--------------KIAENIPGKFWF----KNDVAVHLSCGD 44
Query: 72 EHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
EH+A V + L+ +G+N +GQLG G++ P VK L+ E VK +CG + T E
Sbjct: 45 EHSAVVTGNNKLYVFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHTLVSTE 104
Query: 132 PRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQ 189
G +L + + + F R+ + FT I Q+S GS AL+E G L
Sbjct: 105 GGNVYATGGNDEGQLGLGDTEERTTFHRVSF--FTSQHKIKQLSAGSNTSAALTEDGRLF 162
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
WG N GQ+G +V G + ++ +SCG YHSA V+ +GE+
Sbjct: 163 MWGDNSEGQIGLPNILNACVPHQVTIG-----------KPVSWISCGYYHSAFVTTDGEL 211
Query: 250 YTWGLGSVGQLGHCS-LQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
Y +G G+LG + L S + +P+ V + I+ VACGG HS LT + A+Y +G
Sbjct: 212 YIFGESENGKLGLPNELLSNHR--IPQLVPEIPEKVIQ-VACGGEHSVVLT-EDAVYTFG 267
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN----GVQLVACGHSHTLVYMRDG 364
Q GQLGLG F VV N + ++CG +H + +G
Sbjct: 268 LGQFGQLGLGT-------------LLFETSEPKVVENIGNKTISYISCGENHAALLTDNG 314
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPV---DWCVGEVRKLAAGGGHSAVLA 412
++ +G +G+ + +P ++ V+ +A GG H V A
Sbjct: 315 LMYTFGDGRHGKLGLGLENFTNQFTPTLCCNFLKFVVKLVACGGCHMVVFA 365
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 140/311 (45%), Gaps = 34/311 (10%)
Query: 144 LWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
++++G+++ N P FW N + +SCG H ++ L +G N +GQLG G
Sbjct: 14 VFIFGKSKIAENIPGKFW---FKNDVAVHLSCGDEHSAVVTGNNKLYVFGSNNWGQLGLG 70
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
+ + P +K A + EK+ +CG H+ +E G VY G GQLG
Sbjct: 71 -SKSAVSKPTCVK--------ALKPEKVKLAACGRNHTLVSTEGGNVYATGGNDEGQLGL 121
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
+ ++ R IK ++ G S ALT G L+ WG + GQ+GL P
Sbjct: 122 GDTE--ERTTFHRVSFFTSQHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGL-PNIL 178
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA--NE 380
+ + +P++ + + V ++CG+ H+ DG ++ +G + G+ NE
Sbjct: 179 N-ACVPHQ----------VTIGKPVSWISCGYYHSAFVTTDGELYIFGESENGKLGLPNE 227
Query: 381 KSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA-DACSLKELCEF-RLAESVTLSNASE-- 436
+ P V +V ++A GG HS VL DA L +F +L L SE
Sbjct: 228 LLSNHRIPQLVPEIPEKVIQVACGGEHSVVLTEDAVYTFGLGQFGQLGLGTLLFETSEPK 287
Query: 437 -IEDVASRTGS 446
+E++ ++T S
Sbjct: 288 VVENIGNKTIS 298
>gi|21619468|gb|AAH31624.1| RPGR protein [Homo sapiens]
gi|119579847|gb|EAW59443.1| retinitis pigmentosa GTPase regulator, isoform CRA_c [Homo sapiens]
gi|325464495|gb|ADZ16018.1| retinitis pigmentosa GTPase regulator [synthetic construct]
Length = 480
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 162/362 (44%), Gaps = 55/362 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIP---KQLPPELFGCPAGANSRWLDIACGHEH 73
+ + +Y++G N+ GQ G G + + P K L PE + ACG H
Sbjct: 50 VTGNNKLYMFGSNNWGQLGL-GSKSAISKPTCVKALKPE----------KVKLAACGRNH 98
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF-VKSISCGAHCTAAIAEP 132
T G ++ G N GQLG G E R + SE +K +S G++ +AA+ E
Sbjct: 99 TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTE- 157
Query: 133 RENDGTISTSRLWVWGQN-QGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECG 186
DG RL++WG N +G + P + + +SCG H ++ G
Sbjct: 158 ---DG-----RLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDG 209
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKG---YAKFLDEAPELEKITQVSCGEYHSAAV 243
L +G E G+LG P + G + + E PE K+ QV+CG H+ +
Sbjct: 210 ELYVFGEPENGKLGL---------PNQLLGNHRTPQLVSEIPE--KVIQVACGGEHTVVL 258
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+EN VYT+GLG GQLG + E P+ + + I ++CG H+ +T G
Sbjct: 259 TENA-VYTFGLGQFGQLGLGTFLFETSE--PKVIENIRDQTISYISCGENHTALITDIGL 315
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 363
+Y +G + G+LGLG + + IP + R I V+LVACG H +V+
Sbjct: 316 MYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFI--------VKLVACGGCHMVVFAAP 367
Query: 364 GR 365
R
Sbjct: 368 HR 369
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 167/360 (46%), Gaps = 36/360 (10%)
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
N + ++CG EH+A V + L+ +G+N +GQLG G++ P VK L+ E VK +
Sbjct: 34 NDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAA 93
Query: 121 CGAHCTAAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVH 178
CG + T E G + +L + + + F + + FT I Q+S GS
Sbjct: 94 CGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISF--FTSEHKIKQLSAGSNT 151
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
AL+E G L WG N GQ+G +V G + ++ +SCG Y
Sbjct: 152 SAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIG-----------KPVSWISCGYY 200
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
HSA V+ +GE+Y +G G+LG + G+ P+ V + I+ VACGG H+ L
Sbjct: 201 HSAFVTTDGELYVFGEPENGKLGLPNQLLGNHR-TPQLVSEIPEKVIQ-VACGGEHTVVL 258
Query: 299 TSKGALYAWGGSQAGQLGLGP---QTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS 355
T + A+Y +G Q GQLGLG +T +I N D + ++CG +
Sbjct: 259 T-ENAVYTFGLGQFGQLGLGTFLFETSEPKVIENIRD------------QTISYISCGEN 305
Query: 356 HTLVYMRDGRIHGWGYNSYGQ--AANEKSTYAWYPSPVDWCVGEVRKLAA-GGGHSAVLA 412
HT + G ++ +G +G+ E T + P+ + + KL A GG H V A
Sbjct: 306 HTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFA 365
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 121/284 (42%), Gaps = 51/284 (17%)
Query: 144 LWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
++ +G+++ N P FW N + +SCG H ++ L +G N +GQLG G
Sbjct: 14 VFTFGKSKFAENNPGKFWFK---NDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLG 70
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
+ + P +K A + EK+ +CG H+ +E G VY G + GQLG
Sbjct: 71 -SKSAISKPTCVK--------ALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLG- 120
Query: 263 CSLQSGDKELLPRRVVALDGIF-----IKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GD E R + F IK ++ G S ALT G L+ WG + GQ+GL
Sbjct: 121 ----LGDTE--ERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGL 174
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQL------VACGHSHTLVYMRDGRIHGWGY 371
+N+ + VP V + ++CG+ H+ DG ++ +G
Sbjct: 175 ------------------KNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVFGE 216
Query: 372 NSYGQAANEKSTYAWYPSP--VDWCVGEVRKLAAGGGHSAVLAD 413
G+ + +P V +V ++A GG H+ VL +
Sbjct: 217 PENGKLGLPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTE 260
>gi|282722852|gb|ADA84472.1| retinitis pigmentosa GTPase regulator protein 2 ORF15 [Danio rerio]
Length = 1413
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 121/372 (32%), Positives = 174/372 (46%), Gaps = 60/372 (16%)
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
N L I+CG EHTA V +G LF +G+N +GQLG GT+ P VK L+SE VK +
Sbjct: 35 NDVPLRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALRSERVKLTA 94
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVW---GQNQG----------SNFPRLFWGAFTPNT 167
CG T TSR ++ G N+G ++F + + F
Sbjct: 95 CGRTHTLVF-----------TSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEF--FNKQG 141
Query: 168 IICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL 227
I ++ GS AL++ G L G N GQ+G G L V G F
Sbjct: 142 PIKMLAAGSNTSAALTQDGRLYMRGDNSEGQIGLGKESNALTPQEVSVGKRVFW------ 195
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
VSCG YHSA V+ +G +YT+G G+LG S + +P++V + ++
Sbjct: 196 -----VSCGYYHSAFVTVDGALYTFGEKDSGKLG-LSTEKLANHKVPQQVTDIPDRVVQ- 248
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSF-SLIPNESDTYFRNIPILVVPNG 346
VACGG H+ ALT + +Y++G Q GQLG G T F S +P + +FR
Sbjct: 249 VACGGGHTVALT-ENEVYSFGLGQFGQLGHG--TFIFESRLPRVVE-HFRK-------GR 297
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQ--AANEKSTYAWYPS--P--VDWCVGEVRK 400
V+ ACG +HT + +G ++ +G +G+ E T + P+ P +D+ V V
Sbjct: 298 VKHAACGENHTALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSV-- 355
Query: 401 LAAGGGHSAVLA 412
GG H VLA
Sbjct: 356 -TCGGCHMLVLA 366
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 122/280 (43%), Gaps = 43/280 (15%)
Query: 144 LWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
++ +G+++ N P FW N + ++SCG H ++E G L +G N +GQLG G
Sbjct: 15 VFTFGKSKFADNAPSKFW---LKNDVPLRISCGDEHTALVTENGKLFMFGSNNWGQLGLG 71
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ--L 260
T + P +K A E++ +CG H+ + G +Y G + GQ L
Sbjct: 72 -TKTTVNKPTCVK--------ALRSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGL 122
Query: 261 GHCSLQSGDKELLPRRVVALDGIF-----IKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
G C+ R L F IK +A G S ALT G LY G + GQ+
Sbjct: 123 GDCN---------DRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMRGDNSEGQI 173
Query: 316 GLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
GLG + S +L P E + V V V+CG+ H+ DG ++ +G G
Sbjct: 174 GLGKE--SNALTPQE----------VSVGKRVFWVSCGYYHSAFVTVDGALYTFGEKDSG 221
Query: 376 Q--AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLAD 413
+ + EK P V V ++A GGGH+ L +
Sbjct: 222 KLGLSTEKLANHKVPQQVTDIPDRVVQVACGGGHTVALTE 261
>gi|118349964|ref|XP_001008263.1| Regulator of chromosome condensation [Tetrahymena thermophila]
gi|89290030|gb|EAR88018.1| Regulator of chromosome condensation [Tetrahymena thermophila
SB210]
Length = 2290
Score = 119 bits (299), Expect = 2e-24, Method: Composition-based stats.
Identities = 88/310 (28%), Positives = 138/310 (44%), Gaps = 68/310 (21%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++CGH HT + GT+F +G G+L E + + Q +S+ K G
Sbjct: 273 VSCGHHHTLVITDQGTIFYFGMGTQGKLFLLRE-----CQLLLQNKSKIQKG-QLGNENF 326
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
+ EP E L VW P QV+CGS H +AL++ G
Sbjct: 327 VNVYEPTE---------LLVW-----------------PKRKFIQVACGSSHSMALTDNG 360
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI-TQVSCGEYHSAAVSE 245
+ WG N GQLG+G + L+ +I +E + T + G+ HSA +S+
Sbjct: 361 QIFTWGKNTRGQLGQGHRNDQLKPTMII------------IEVMATSICSGDQHSAFISD 408
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
E+YTWG G +LGH EL P++VV L+ +++ V+CG H+ A+T++G +Y
Sbjct: 409 EKELYTWGNGQYFRLGHGVTTD---ELYPKKVVVLEDVYVTHVSCGMTHTLAITNEGFVY 465
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG +G+LG+ +S L P V+ G H++ G
Sbjct: 466 AWGDGMSGKLGVQENNKSLHL-PTR-------------------VSAGGLHSMALTDQGI 505
Query: 366 IHGWGYNSYG 375
++ WG + G
Sbjct: 506 LYSWGSSKGG 515
Score = 91.7 bits (226), Expect = 8e-16, Method: Composition-based stats.
Identities = 73/258 (28%), Positives = 113/258 (43%), Gaps = 52/258 (20%)
Query: 33 QTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFG 92
Q G+ G E + + + P EL P +++ +ACG H+ A+ +G +FTWG N G
Sbjct: 317 QKGQLGNENFVNVYE--PTELLVWP---KRKFIQVACGSSHSMALTDNGQIFTWGKNTRG 371
Query: 93 QLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQG 152
QLG G + P + + SI G +A I++ +E L+ WG Q
Sbjct: 372 QLGQGHRNDQLKPTMI--IIEVMATSICSGDQHSAFISDEKE---------LYTWGNGQ- 419
Query: 153 SNFPRLFWGAFT----PNTIIC-------QVSCGSVHVVALSECGLLQAWGYNEYGQLGR 201
+ RL G T P ++ VSCG H +A++ G + AWG G+LG
Sbjct: 420 --YFRLGHGVTTDELYPKKVVVLEDVYVTHVSCGMTHTLAITNEGFVYAWGDGMSGKLGV 477
Query: 202 GITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG 261
+ L P T+VS G HS A+++ G +Y+WG G LG
Sbjct: 478 QENNKSLHLP-------------------TRVSAGGLHSMALTDQGILYSWGSSKGGVLG 518
Query: 262 HCSLQSGDKEL--LPRRV 277
Q +K+ LP+++
Sbjct: 519 -IGFQRDNKDCYSLPQKI 535
Score = 87.4 bits (215), Expect = 1e-14, Method: Composition-based stats.
Identities = 70/258 (27%), Positives = 118/258 (45%), Gaps = 38/258 (14%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGL-QGPRVIK----GYAKFLD- 222
I VSCG H + +++ G + +G G+L C+ L Q I+ G F++
Sbjct: 270 IKHVSCGHHHTLVITDQGTIFYFGMGTQGKLFLLRECQLLLQNKSKIQKGQLGNENFVNV 329
Query: 223 -EAPEL-----EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRR 276
E EL K QV+CG HS A+++NG+++TWG + GQLG + +L P
Sbjct: 330 YEPTELLVWPKRKFIQVACGSSHSMALTDNGQIFTWGKNTRGQLGQ---GHRNDQLKPTM 386
Query: 277 VVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFR 336
++ + + G HS ++ + LY WG Q +LG G T D +
Sbjct: 387 III--EVMATSICSGDQHSAFISDEKELYTWGNGQYFRLGHGVTT----------DELYP 434
Query: 337 NIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWY-PSPVDWCV 395
+++ V V+CG +HTL +G ++ WG G+ +++ + + P+
Sbjct: 435 KKVVVLEDVYVTHVSCGMTHTLAITNEGFVYAWGDGMSGKLGVQENNKSLHLPT------ 488
Query: 396 GEVRKLAAGGGHSAVLAD 413
+++AGG HS L D
Sbjct: 489 ----RVSAGGLHSMALTD 502
Score = 82.4 bits (202), Expect = 5e-13, Method: Composition-based stats.
Identities = 62/212 (29%), Positives = 97/212 (45%), Gaps = 34/212 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
I+ WG N GQ G+ R QL+ P + A S I G +H+A ++ +
Sbjct: 362 IFTWGKNTRGQLGQGHRNDQLK------PTMIIIEVMATS----ICSGDQHSAFISDEKE 411
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG ++ +LG G +P+KV L+ +V +SCG T AI N+G +
Sbjct: 412 LYTWGNGQYFRLGHGVTTDELYPKKVVVLEDVYVTHVSCGMTHTLAIT----NEGFV--- 464
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTII---CQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
+ WG G N + +VS G +H +AL++ G+L +WG ++ G L
Sbjct: 465 --YAWGDGMSGKL-----GVQENNKSLHLPTRVSAGGLHSMALTDQGILYSWGSSKGGVL 517
Query: 200 GRGIT-----CEGLQGPRVIKGYAKFLDEAPE 226
G G C L P+ I+ AK + P+
Sbjct: 518 GIGFQRDNKDCYSL--PQKIRTVAKIQSKNPK 547
Score = 72.0 bits (175), Expect = 6e-10, Method: Composition-based stats.
Identities = 55/171 (32%), Positives = 84/171 (49%), Gaps = 26/171 (15%)
Query: 154 NFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV 213
+FP L + N II +SC H +A+S G+ +WG N+Y QLG G C+ P+
Sbjct: 779 DFPFLI--PYFKNKIIF-MSCSYTHAIAISHKGVAYSWGSNKYYQLGLGYMCKYNHIPQK 835
Query: 214 IKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL 273
I+G A E ++I +C + SA +++ GE++T+G G LGH D++
Sbjct: 836 IQG-------ALETKRIIMSTCSDRFSALLTDKGEIWTFGTSDSGVLGH------DEK-- 880
Query: 274 PRRVVALDGIFIKDV------ACGGVHSCALT-SKGALYAWGGSQAGQLGL 317
V + I D+ A G A+T K +YAWG + GQLG+
Sbjct: 881 -NYYVVSEPKMINDIPPMIFLASGPQGMMAITEQKRQIYAWGNNLYGQLGI 930
Score = 64.7 bits (156), Expect = 9e-08, Method: Composition-based stats.
Identities = 86/376 (22%), Positives = 152/376 (40%), Gaps = 80/376 (21%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKH-PEKVK-QLQSEFVKSISCGAH 124
++C + H A++ G ++WG+N++ QLG G H P+K++ L+++ + +C
Sbjct: 794 MSCSYTHAIAISHKGVAYSWGSNKYYQLGLGYMCKYNHIPQKIQGALETKRIIMSTCSDR 853
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSNF----PRLFWGAFTPNTIICQVSCGSVHVV 180
+A + + E T TS V G ++ + + P++ P I ++ G ++
Sbjct: 854 FSALLTDKGE-IWTFGTSDSGVLGHDEKNYYVVSEPKMI--NDIPPMIF--LASGPQGMM 908
Query: 181 ALSECG-LLQAWGYNEYGQLGRGITCEGLQ----GPRV--------IKGYAKFLDEAPEL 227
A++E + AWG N YGQLG IT + GP + IK K +D +
Sbjct: 909 AITEQKRQIYAWGNNLYGQLGIQITNNNMNMNQFGPDIDIDDSQDEIKQKEKKIDLDEQN 968
Query: 228 EKIT----------------------QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSL 265
+KIT Q+ G +HS A+ + G +Y+ GL L
Sbjct: 969 KKITKNQIIYKPQKVKIENDRKIQIRQIGMGMFHSVAIDDLGHLYSCGLRKFSGLAESLS 1028
Query: 266 QSG-----DKELLPRRVVALDGIFIKDVACGGVHSCALTS------KGALYAWGGSQAGQ 314
+ G D + ++ L+ F + V+ H+ ALT ++ WG G
Sbjct: 1029 KEGLSGFDDTFIYLKKDHMLNHQF-QQVSVSEYHTLALTQDQTGEFNNVVFGWGLCNLGN 1087
Query: 315 LGLGP-------------QTRSFSLIPNESDTYFRNIPILVVP-------NGVQLVACGH 354
L L Q + F L NE +PI + + + ++ G
Sbjct: 1088 LCLKDQKEIQQAMKDMKYQMKDFDL--NEPLKEMFTLPINLTQINKFKDCDNIVYISAGL 1145
Query: 355 SHTLVYMRDGRIHGWG 370
H L ++G++ WG
Sbjct: 1146 MHNLAMNKNGKVFSWG 1161
Score = 56.6 bits (135), Expect = 3e-05, Method: Composition-based stats.
Identities = 85/389 (21%), Positives = 142/389 (36%), Gaps = 125/389 (32%)
Query: 20 KSAIYVWGYNHSGQTGRKGRE----RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTA 75
K I+ +G + SG G + + ++ +PP +F +A G +
Sbjct: 861 KGEIWTFGTSDSGVLGHDEKNYYVVSEPKMINDIPPMIF------------LASGPQGMM 908
Query: 76 AVASDG-TLFTWGANEFGQLG-------------------DGTEEGRKHPEKVKQLQSEF 115
A+ ++ WG N +GQLG D +++ K EK L +
Sbjct: 909 AITEQKRQIYAWGNNLYGQLGIQITNNNMNMNQFGPDIDIDDSQDEIKQKEKKIDLDEQN 968
Query: 116 VKSISCGAHCTAAIAEPR----ENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQ 171
K I +P+ END I I Q
Sbjct: 969 KKITK-----NQIIYKPQKVKIENDRKIQ----------------------------IRQ 995
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK-- 229
+ G H VA+ + G L + G ++ L ++ EGL G F D L+K
Sbjct: 996 IGMGMFHSVAIDDLGHLYSCGLRKFSGLAESLSKEGLSG---------FDDTFIYLKKDH 1046
Query: 230 -----ITQVSCGEYHSAAVSE------NGEVYTWGLGSVGQL---GHCSLQSGDKEL--- 272
QVS EYH+ A+++ N V+ WGL ++G L +Q K++
Sbjct: 1047 MLNHQFQQVSVSEYHTLALTQDQTGEFNNVVFGWGLCNLGNLCLKDQKEIQQAMKDMKYQ 1106
Query: 273 ---------------LPRRVVALDGIFIKD----VACGGVHSCALTSKGALYAWGGSQAG 313
LP + ++ D ++ G +H+ A+ G +++WG Q G
Sbjct: 1107 MKDFDLNEPLKEMFTLPINLTQINKFKDCDNIVYISAGLMHNLAMNKNGKVFSWGSFQNG 1166
Query: 314 QLGLGPQTRSFSLIPNESDTYFRNIPILV 342
+LG+ T + +L P D +F P +V
Sbjct: 1167 RLGI--STTNLNLPP---DQFFTTEPQIV 1190
Score = 52.0 bits (123), Expect = 6e-04, Method: Composition-based stats.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 16/151 (10%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKD 287
KI +SC H+ A+S G Y+WG QLG + + +P+++ AL+ I
Sbjct: 790 KIIFMSCSYTHAIAISHKGVAYSWGSNKYYQLGLGYMCKYNH--IPQKIQGALETKRIIM 847
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPN 345
C S LT KG ++ +G S +G LG +E + Y + P ++ +P
Sbjct: 848 STCSDRFSALLTDKGEIWTFGTSDSGVLG-----------HDEKNYYVVSEPKMINDIPP 896
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+ L + + + +I+ WG N YGQ
Sbjct: 897 MIFLASGPQGMMAITEQKRQIYAWGNNLYGQ 927
Score = 50.4 bits (119), Expect = 0.002, Method: Composition-based stats.
Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 29/167 (17%)
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNES--------DTYFR 336
IK V+CG H+ +T +G ++ +G G+L L + + L+ N+S + F
Sbjct: 270 IKHVSCGHHHTLVITDQGTIFYFGMGTQGKLFLLRECQL--LLQNKSKIQKGQLGNENFV 327
Query: 337 NI----PILVVPNGVQL-VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
N+ +LV P + VACG SH++ +G+I WG N+ GQ P+ +
Sbjct: 328 NVYEPTELLVWPKRKFIQVACGSSHSMALTDNGQIFTWGKNTRGQLGQGHRNDQLKPTMI 387
Query: 392 DWCVGEV--RKLAAGGGHSAVLADACSLKELCE------FRLAESVT 430
+ EV + +G HSA ++D KEL FRL VT
Sbjct: 388 ---IIEVMATSICSGDQHSAFISDE---KELYTWGNGQYFRLGHGVT 428
>gi|345788791|ref|XP_542564.3| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Canis lupus familiaris]
Length = 529
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 120/245 (48%), Gaps = 23/245 (9%)
Query: 148 GQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEG 207
G Q + PR A + I C H+V + G + WG+N Y QLG G T G
Sbjct: 81 GDVQSTIEPRRL-DALSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHG 139
Query: 208 LQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQS 267
L + + +++T+V+CG YHS ++ +GEV+ WG + GQ+G S +
Sbjct: 140 LVPCHISTNLSN--------KQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTAN 191
Query: 268 GDKELLPRRVVA-LDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSL 326
+ +PRRV L + ++ACG + S A+ + G +Y WG + GQLGLG +
Sbjct: 192 ---QPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTP 248
Query: 327 IPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAW 386
+ R +Q VACG++HTLV +G+++ WG NSYGQ +
Sbjct: 249 CRIAALQGIR----------IQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQS 298
Query: 387 YPSPV 391
YP+PV
Sbjct: 299 YPAPV 303
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 132/300 (44%), Gaps = 43/300 (14%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTAAIAEPRENDGTIS 140
+F G N G LG G + P ++ L + + +S G+ H A E
Sbjct: 67 IFVLGTNCCGCLGLGDVQSTIEPRRLDALSGKKIACLSYGSGPHIVLATTE--------- 117
Query: 141 TSRLWVWGQNQGSNFPR---------LFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
++ WG N S N + +V+CGS H + L+ G + AW
Sbjct: 118 -GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAW 176
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
GYN GQ+G G T PR + G + + + ++CG+ S AV GEVY
Sbjct: 177 GYNNSGQVGSGSTAN-QPIPRRVTGCLQN-------KVVVNIACGQMCSMAVVNTGEVYV 228
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG GQLG L S + P R+ AL GI I+ VACG H+ LT +G +YAWG +
Sbjct: 229 WGYNGNGQLG---LGSSGNQPTPCRIAALQGIRIQRVACGYAHTLVLTDEGQVYAWGANS 285
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRIHGWG 370
GQLG G N+S+ + ++ V++ AC +HT + G ++ WG
Sbjct: 286 YGQLGTG----------NKSNQSYPAPVVVEKDRIVEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 115/243 (47%), Gaps = 39/243 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G +P + L +N + ++ACG H+ + SDG
Sbjct: 120 VFTWGHNAYSQLG-NGTTNHGLVPCHISTNL------SNKQVTEVACGSYHSLVLTSDGE 172
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P +V LQ++ V +I+CG C+ A+ ++T
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAV---------VNT 223
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N N P A I +V+CG H + L++ G + AWG
Sbjct: 224 GEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRIQRVACGYAHTLVLTDEGQVYAWGA 283
Query: 194 NEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G + + P V+ E ++I ++ +C H SAA ++ G VY
Sbjct: 284 NSYGQLGTGNKSNQSYPAPVVV-----------EKDRIVEIAACHSAHTSAAKTQGGHVY 332
Query: 251 TWG 253
WG
Sbjct: 333 MWG 335
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 70/154 (45%), Gaps = 19/154 (12%)
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHSCALTSK 301
N E++ G G LG +QS + PRR+ AL G K +AC G H T++
Sbjct: 64 NDEIFVLGTNCCGCLGLGDVQS---TIEPRRLDALSG---KKIACLSYGSGPHIVLATTE 117
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
G ++ WG + QLG G T + L+P T N V VACG H+LV
Sbjct: 118 GEVFTWGHNAYSQLGNG--TTNHGLVPCHISTNLSN-------KQVTEVACGSYHSLVLT 168
Query: 362 RDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 395
DG + WGYN+ GQ + + P V C+
Sbjct: 169 SDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCL 202
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 68/151 (45%), Gaps = 20/151 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G Q P A R +ACG+ HT + +G
Sbjct: 226 VYVWGYNGNGQLGLGSSGNQ--------PTPCRIAALQGIRIQRVACGYAHTLVLTDEGQ 277
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
++ WGAN +GQLG G + + +P V + V+ +C AH +AA +
Sbjct: 278 VYAWGANSYGQLGTGNKSNQSYPAPVVVEKDRIVEIAACHSAHTSAAKTQ---------G 328
Query: 142 SRLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 329 GHVYMWGQCRGQSVVLPHLTHFSCTDDVFAC 359
>gi|42563438|ref|NP_186900.3| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
gi|110735845|dbj|BAE99899.1| hypothetical protein [Arabidopsis thaliana]
gi|332640299|gb|AEE73820.1| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
Length = 393
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 144/331 (43%), Gaps = 61/331 (18%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKH-PEKVKQLQSEFVKSISCGA-H 124
+ G ++ A+ DGT+FTWG N+ G LG E ++ P +VK L + + + G H
Sbjct: 43 VVSGSRNSLAICDDGTMFTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWH 102
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQ-------------GSNFPR--LFWGAFTPNTII 169
C A + R + WG N+ G R + P +
Sbjct: 103 CLAVDDQ----------GRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTV 152
Query: 170 CQVSCGSVHVVALSECGLLQAWGY----NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAP 225
QV+ G H V L+ G + WG + Q+ + +GL+ R+I
Sbjct: 153 RQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLENVRLI----------- 201
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFI 285
+ G +H+ A+ E+G + WG GQLG Q P V LD + +
Sbjct: 202 --------AVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSH---PVPVQGLDDLTL 250
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
D+A GG HS ALT KG +Y WG + G+LGLG +S ++P + + L+
Sbjct: 251 VDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVN--------LLAEE 302
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+ V+CG +H++ RDGRI +G +G+
Sbjct: 303 DIIQVSCGGTHSVALTRDGRIFSFGRGDHGR 333
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 159/365 (43%), Gaps = 61/365 (16%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++ WG+N G G + + IP ++ A AN + A G H AV G
Sbjct: 58 TMFTWGWNQRGTLGHQPETKTENIPSRVK-------ALANVKITQAAIGGWHCLAVDDQG 110
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+ WG NE+GQ G EE K E + ++ + V C T + T
Sbjct: 111 RAYAWGGNEYGQCG---EEPLKD-EMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLT 166
Query: 142 SR--LWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
+W WGQ + + P G + ++ G+ H +AL E G L AWG
Sbjct: 167 REGHVWTWGQPWPPGDIKQISVPVRVQGLEN----VRLIAVGAFHNLALEEDGRLLAWGN 222
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
NEYGQLG G T + P ++G LD+ + ++ G +HS A+++ GEVY WG
Sbjct: 223 NEYGQLGTGDT-QPTSHPVPVQG----LDDL----TLVDIAAGGWHSTALTDKGEVYGWG 273
Query: 254 LGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
G G+LG L DK +++P++V L I V+CGG HS ALT G ++++G
Sbjct: 274 RGEHGRLG---LGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGD 330
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN---------------GVQLVACGHSH 356
G+LG G + + + +PI + P + +ACG H
Sbjct: 331 HGRLGYGRKVTTGQPL---------ELPIKIPPPEGSFNHTDEEEEGKWSAKSIACGGRH 381
Query: 357 TLVYM 361
TL +
Sbjct: 382 TLAIV 386
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 108/258 (41%), Gaps = 32/258 (12%)
Query: 162 AFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFL 221
A P ++ VS GS + +A+ + G + WG+N+ G LG + P +K A
Sbjct: 34 ALEPYSVRSVVS-GSRNSLAICDDGTMFTWGWNQRGTLGHQPETKTENIPSRVKALANV- 91
Query: 222 DEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-- 279
KITQ + G +H AV + G Y WG GQ G L+ + R +V
Sbjct: 92 -------KITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPK 144
Query: 280 --LDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRN 337
+ ++ VA GG HS LT +G ++ WG D +
Sbjct: 145 RCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQPWP-----------------PGDIKQIS 187
Query: 338 IPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG 396
+P+ V V+L+A G H L DGR+ WG N YGQ + +P PV
Sbjct: 188 VPVRVQGLENVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDD 247
Query: 397 -EVRKLAAGGGHSAVLAD 413
+ +AAGG HS L D
Sbjct: 248 LTLVDIAAGGWHSTALTD 265
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 86/188 (45%), Gaps = 10/188 (5%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
IA G H A+ DG L WG NE+GQLG G + HP V+ L + I+ G +
Sbjct: 201 IAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHS 260
Query: 127 AAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
A+ + E G RL + ++ S II QVSCG H VAL+
Sbjct: 261 TALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEEDII-QVSCGGTHSVALTR 319
Query: 185 CGLLQAWGYNEYGQLGRG---ITCEGLQGPRVI---KGYAKFLDEAPELE-KITQVSCGE 237
G + ++G ++G+LG G T + L+ P I +G DE E + ++CG
Sbjct: 320 DGRIFSFGRGDHGRLGYGRKVTTGQPLELPIKIPPPEGSFNHTDEEEEGKWSAKSIACGG 379
Query: 238 YHSAAVSE 245
H+ A+ E
Sbjct: 380 RHTLAIVE 387
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 22/133 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG G+ GR G + K +P ++ A + ++CG H+ A+
Sbjct: 266 KGEVYGWG---RGEHGRLGLGDNDKSSKMVPQKVNLL---AEEDIIQVSCGGTHSVALTR 319
Query: 80 DGTLFTWGANEFGQLGDG----TEEGRKHPEKVKQLQSEF------------VKSISCGA 123
DG +F++G + G+LG G T + + P K+ + F KSI+CG
Sbjct: 320 DGRIFSFGRGDHGRLGYGRKVTTGQPLELPIKIPPPEGSFNHTDEEEEGKWSAKSIACGG 379
Query: 124 HCTAAIAEPREND 136
T AI E + +D
Sbjct: 380 RHTLAIVEWKSDD 392
>gi|328709531|ref|XP_003243987.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
[Acyrthosiphon pisum]
Length = 505
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 171/412 (41%), Gaps = 68/412 (16%)
Query: 15 DNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHT 74
D IP A++ +G + +P F N ++I+CG EH+
Sbjct: 5 DVIPETGAVFTYG--------------KSSFADNIPSHFFI----RNDPVIEISCGEEHS 46
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR- 133
V +G +F +G N FGQLG G E P VK L+ + VK I+CG T E
Sbjct: 47 GIVCKNGRVFCFGKNSFGQLGLGHTENVYKPNCVKSLKPDKVKHIACGRSHTIVSTENNI 106
Query: 134 ------ENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
+DG + S V + R F II Q+S GS H AL E G
Sbjct: 107 VYGFGDNSDGQLGQSVADVTHSDVPIEVTR-----FNDKNII-QLSAGSYHTAALLENGD 160
Query: 188 LQAWGYNEYGQLGRGITCE---GLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
+ WG N QLG + + P ++ P + VSCG H+A V+
Sbjct: 161 VYVWGSNSDRQLGLNSMDDDSVNVSVPTIV----------PIALPVLYVSCGHTHTAFVT 210
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
G++YT G G+LGH L S + ++V V+CG H+ AL G +
Sbjct: 211 RIGDLYTCGDREYGKLGH-GLWSLSRVDTTEKIVK--------VSCGANHTIALNDAGKV 261
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 364
+ G + GQ+GL T L P N PI VQ+V CG SH+ G
Sbjct: 262 FVCGNNDCGQIGLRNVTSQGHLYP----CPITNEPI------VQIV-CGQSHSAFITASG 310
Query: 365 RIHGWGYNSYGQA---ANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLAD 413
++ G YG+ N+ +T + VD + V+ ++ GG H+ + A+
Sbjct: 311 KLFMCGDGKYGKLGIDVNQITTPTLVLAFVDKNLN-VQMVSCGGNHTLIHAE 361
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 127/283 (44%), Gaps = 29/283 (10%)
Query: 134 ENDGTISTSRLWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
E D T ++ +G++ N P F F N + ++SCG H + + G + +G
Sbjct: 3 EEDVIPETGAVFTYGKSSFADNIPSHF---FIRNDPVIEISCGEEHSGIVCKNGRVFCFG 59
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
N +GQLG G T E + P +K +K+ ++CG H+ +EN VY +
Sbjct: 60 KNSFGQLGLGHT-ENVYKPNCVKSLKP--------DKVKHIACGRSHTIVSTENNIVYGF 110
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G S GQLG S+ +P V + I ++ G H+ AL G +Y WG +
Sbjct: 111 GDNSDGQLGQ-SVADVTHSDVPIEVTRFNDKNIIQLSAGSYHTAALLENGDVYVWGSNSD 169
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQLVACGHSHTLVYMRDGRIHGWGY 371
QLGL + D+ ++P +V + V V+CGH+HT R G ++ G
Sbjct: 170 RQLGLNSM---------DDDSVNVSVPTIVPIALPVLYVSCGHTHTAFVTRIGDLYTCGD 220
Query: 372 NSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADA 414
YG+ + W S VD ++ K++ G H+ L DA
Sbjct: 221 REYGKLGHG----LWSLSRVDT-TEKIVKVSCGANHTIALNDA 258
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 10/117 (8%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++V G N GQ G + Q L+ CP N + I CG H+A + + G
Sbjct: 261 VFVCGNNDCGQIGLRNVTSQ--------GHLYPCPI-TNEPIVQIVCGQSHSAFITASGK 311
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF-VKSISCGAHCTAAIAEPRENDGT 138
LF G ++G+LG + + + V+ +SCG + T AEP +N+ T
Sbjct: 312 LFMCGDGKYGKLGIDVNQITTPTLVLAFVDKNLNVQMVSCGGNHTLIHAEPLDNELT 368
>gi|426258035|ref|XP_004022625.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Ovis
aries]
Length = 1137
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 122/415 (29%), Positives = 192/415 (46%), Gaps = 53/415 (12%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
+ ++CG EHTA + LF +G+N +GQLG G++ P +K L+ E VK ++CG +
Sbjct: 64 ISLSCGDEHTAITTGNNKLFMFGSNNWGQLGLGSKATVNKPTCIKALKPEKVKFVACGRN 123
Query: 125 CTAAI-------AEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSV 177
T + A N+G +L + ++ S F + + FT I Q+S GS
Sbjct: 124 HTLVLTGGGKVYATGGNNEG-----QLGLGDTDERSAFHLISF--FTSQHKIKQLSAGSN 176
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
AL+E G L WG N GQ+G +V G + I+ +SCG
Sbjct: 177 TSAALTEDGELFMWGDNSEGQIGLQNITNMCVPHQVTVG-----------KPISWISCGY 225
Query: 238 YHSAAVSENGEVYTWGLGSVGQLG-HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSC 296
YHSA V+ GE+YT+G G+LG L K +P+ V + I+ VACGG H+
Sbjct: 226 YHSAFVTTEGELYTFGEPESGKLGLPPKLLVNHK--VPQLVPGISEKVIQ-VACGGGHTV 282
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
LT K A+Y +G Q GQLGLG +F+ +T + V + V CG +H
Sbjct: 283 VLTEK-AVYTFGLGQFGQLGLG----TFTF-----ETSEPKVIESVKDKKISHVCCGENH 332
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV---DWCVGEVRKLAAGGGHSAV--- 410
T + G ++ +G +G+ +A P ++ V +A GG H V
Sbjct: 333 TALITESGLLYTFGDGRHGKLGLGMENFANQFLPTLCSNFLKYIVHLVACGGCHMLVFAT 392
Query: 411 ----LADACSLKELCEFRLAESVTLS-NASEIEDVASRTGSEALARLCERLREHS 460
+A+ E+ ++ L ++ + + +E++ R+ S AR+ R RE S
Sbjct: 393 PRLGMAEDIESDEIDDYCLPSAIYVPISDPPLENILQRSLS---ARVRRRKREKS 444
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 88/196 (44%), Gaps = 40/196 (20%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+++WG N GQ G + + +P Q+ G W I+CG+ H+A V ++G
Sbjct: 187 LFMWGDNSEGQIGLQNI-TNMCVPHQV-------TVGKPISW--ISCGYYHSAFVTTEGE 236
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQ---SEFVKSISCGAHCTAAIAEPRENDGTI 139
L+T+G E G+LG + H KV QL SE V ++CG T + E
Sbjct: 237 LYTFGEPESGKLGLPPKLLVNH--KVPQLVPGISEKVIQVACGGGHTVVLTE-------- 286
Query: 140 STSRLWVWGQNQGSNFPRLFWGAFT-----PNTI-------ICQVSCGSVHVVALSECGL 187
++ +G Q F +L G FT P I I V CG H ++E GL
Sbjct: 287 --KAVYTFGLGQ---FGQLGLGTFTFETSEPKVIESVKDKKISHVCCGENHTALITESGL 341
Query: 188 LQAWGYNEYGQLGRGI 203
L +G +G+LG G+
Sbjct: 342 LYTFGDGRHGKLGLGM 357
>gi|3414809|gb|AAC31431.1| rjs [Mus musculus]
Length = 4836
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 179/410 (43%), Gaps = 65/410 (15%)
Query: 20 KSAIYVWGYNHSGQTG-RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
++ ++VWG N Q G KG + ++ P + N + +A G + AV
Sbjct: 2959 RTKVFVWGLNDKDQLGGLKGSKIKV-------PSFSETLSALNV--VQVAGGSKSLFAVT 3009
Query: 79 SDGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRE 134
+G +++ G G+LG G G P ++ L S VK ++ G H TA
Sbjct: 3010 VEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV---- 3065
Query: 135 NDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSE 184
DG +++ WG+ PRL T I ++CGS H AL+
Sbjct: 3066 -DG-----KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTS 3117
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAA 242
G L WG EYG+LG G L+ P+++K ++ QV+CG + + A
Sbjct: 3118 SGELYTWGLGEYGRLGHGDNTTQLK-PKMVKVLLG--------HRVIQVACGTRDAQTLA 3168
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
+++ G V++WG G G+LG + + +P+ + L+G + + CG S ALT G
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTKSG 3225
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLVY 360
++ WG +LG G SD + R ++ G ++V A G H L
Sbjct: 3226 VVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3273
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
G+++ WG N +GQ N +T P+ V G+ + ++A G HS
Sbjct: 3274 TDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3323
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 134/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3069 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 3120
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG +A E
Sbjct: 3121 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGTRDAQTLALTDEG------- 3173
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 3174 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3230
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV+++G+VY
Sbjct: 3231 GKGDYFRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDSGQVYA 3281
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3282 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3327
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 3008 VTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQI-----TALSSYVVKKVAVHSGGRHATA 3062
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+
Sbjct: 3063 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------ 3116
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CG+ +AL+
Sbjct: 3117 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGTRDAQTLALT 3170
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 3171 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 3221
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH S K P+ V L G I VA G +H A+T G
Sbjct: 3222 TKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDSGQ 3278
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 3279 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3325
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 145/327 (44%), Gaps = 50/327 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +D+A G H+A V + G
Sbjct: 4062 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRGIEV--VDVAAGGAHSACVTAAGD 4113
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG E + P+ V+ LQ V I+CG+ + +D T+
Sbjct: 4114 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLC--LTDDDTV--- 4168
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G+ P I + +V CGS VAL++ G + WG
Sbjct: 4169 --WSWGDGDYGKLGRGGSDGSKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4226
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 4227 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4277
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G + VACG H+ AW S+
Sbjct: 4278 NDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAWSTSKPAS 4325
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPIL 341
G P + +P E + + + IPI+
Sbjct: 4326 AGKLP-----AQVPMEYN-HLQEIPII 4346
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 174/411 (42%), Gaps = 76/411 (18%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P C A A R + + G + AV +DG
Sbjct: 3956 IYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALATLRPVQLIGGEQTLFAVTADG 4006
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 4007 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE------- 4059
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG+ + PR+ + V+ G H ++ G L
Sbjct: 4060 ---GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAGDL 4114
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSEN 246
WG YG+LG + + L+ P+++ EA + ++ ++C G+ + ++++
Sbjct: 4115 YTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVIDIACGSGDAQTLCLTDD 4165
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4166 DTVWSWGDGDYGKLGR---GGSDGSKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 4222
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTL 358
WG +LG G SD + R P VQ +A G H +
Sbjct: 4223 WGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCV 4264
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
DG ++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4265 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4315
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 127/276 (46%), Gaps = 25/276 (9%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N P+L G + N + H +AL+ G + +WG + G+LG G
Sbjct: 472 RVYTQAYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG 531
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P+VI ++ + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 532 DTVP-LEEPKVISAFSG----KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 586
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + E +P V L G+ + DVACG + A+T G +++WG G+LG G
Sbjct: 587 ---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 643
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D V V CG ++ +DG+++ WG +
Sbjct: 644 DGCKTPKLIEKLQDL------------DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 691
Query: 379 NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ YP ++ G +V +AAG H L +
Sbjct: 692 LGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 124/253 (49%), Gaps = 30/253 (11%)
Query: 134 ENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N +GS + + QV+ GS + A++
Sbjct: 2953 ESTATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + + G G+LG G++ + PR I + ++ K V G H+ A++
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYV------VKKVAVHSGGRHATALTV 3065
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS ALTS G LY
Sbjct: 3066 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELY 3122
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRD 363
WG + G+LG G T L P + + +L+ +Q VACG + TL +
Sbjct: 3123 TWGLGEYGRLGHGDNTT--QLKP-------KMVKVLLGHRVIQ-VACGTRDAQTLALTDE 3172
Query: 364 GRIHGWGYNSYGQ 376
G + WG +G+
Sbjct: 3173 GLVFSWGDGDFGK 3185
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 134/310 (43%), Gaps = 53/310 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHC 125
+ G +H A++S+G +++WG E G+LG G P ++ L+ E V + GAH
Sbjct: 4046 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4105
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCG 175
A L+ WG+ + P+L A + +I ++CG
Sbjct: 4106 ACVTA----------AGDLYTWGKGRYGRLGHSDSEDQLKPKLV-EALQGHRVI-DIACG 4153
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + L++ + +WG +YG+LGRG +G + P I + +V
Sbjct: 4154 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGSKVPMKIDSLTGL--------GVVKV 4204
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G VYTWG G +LGH S D PR+V L G + +A G +
Sbjct: 4205 ECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSL 4261
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLV 350
H T G +Y WG + GQLG G T P LV V V
Sbjct: 4262 HCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRV 4308
Query: 351 ACGHSHTLVY 360
ACG +HTL +
Sbjct: 4309 ACGSAHTLAW 4318
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 130/283 (45%), Gaps = 41/283 (14%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+L A N + H A+A+ G +++WG + G+LG G + P+ +
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVI 542
Query: 109 KQLQ----SEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT 164
+ V I+CG+ +AAI E L+ WG+ N+ RL G+
Sbjct: 543 SAFSGKQAGKHVVHIACGSTYSAAITAEGE---------LYTWGRG---NYGRLGHGSSE 590
Query: 165 PNTI-----------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
I + V+CGS +A++E G + +WG +YG+LGRG +G + P
Sbjct: 591 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTP 649
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
++I+ + +V CG S A++++G+VY+WG G +LG L + +
Sbjct: 650 KLIEKLQDL--------DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLG---LGTEEHV 698
Query: 272 LLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
P+ + L G + DVA G H ALT +++WG + Q
Sbjct: 699 RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 137/295 (46%), Gaps = 37/295 (12%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG G+ G G L PK + G AG + + IACG ++AA
Sbjct: 511 LAATGEVYSWGCGDGGRLGH-GDTVPLEEPKVIS-AFSGKQAGKHV--VHIACGSTYSAA 566
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E P V L+ V ++CG+ +A
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA------ 620
Query: 137 GTISTSRLWVWGQ----------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
++W WG + G P+L + I +V CGS +AL++ G
Sbjct: 621 -VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVI--KVRCGSQFSIALTKDG 677
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ +WG + +LG G T E ++ P++++G + +K+ V+ G H A++E+
Sbjct: 678 QVYSWGKGDNQRLGLG-TEEHVRYPKLLEGL--------QGKKVIDVAAGSTHCLALTED 728
Query: 247 GEVYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
EV++W GS Q H +L+ E P + LD I +ACG S A +S
Sbjct: 729 SEVHSW--GSNDQCQHFDTLRVTKPE--PTALPGLDSKHIVGIACGPAQSFAWSS 779
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 98/212 (46%), Gaps = 28/212 (13%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ ++CGS + A++ G L WG YG+LG G + E P ++ G
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-SSEDEAIPMLVAGLKGL-------- 604
Query: 229 KITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
K+ V+CG + + AV+ENG+V++WG G G+LG D P+ + L + +
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR---GGSDGCKTPKLIEKLQDLDVI 661
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
V CG S ALT G +Y+WG +LGLG ++ + R +L G
Sbjct: 662 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGLG------------TEEHVRYPKLLEGLQG 709
Query: 347 VQL--VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
++ VA G +H L D +H WG N Q
Sbjct: 710 KKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 111/281 (39%), Gaps = 69/281 (24%)
Query: 186 GLLQAWGYNEYGQLGRGI---------TCEGLQGPRVIK--------------------G 216
G + WG+N GQLG GI CE L R ++ G
Sbjct: 3954 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4012
Query: 217 Y----------AKFLDEAPELEKITQ-------VSCGEYHSAAVSENGEVYTWGLGSVGQ 259
Y + + LE I V+ G H A+S GEVY+WG G+
Sbjct: 4013 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4072
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LGH + D+ PR + +L GI + DVA GG HS +T+ G LY WG + G+LG
Sbjct: 4073 LGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG--- 4126
Query: 320 QTRSFSLIPNESDTYFRNIPILVVP---NGVQLVAC--GHSHTLVYMRDGRIHGWGYNSY 374
SD+ + P LV + V +AC G + TL D + WG Y
Sbjct: 4127 ----------HSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDY 4176
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADA 414
G+ S + P +D G V K+ G S L +
Sbjct: 4177 GKLGRGGSDGSKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4217
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 100/219 (45%), Gaps = 46/219 (21%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ QV+C + LS G + YN + P++++G A + +
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNS-----------DMLAPQLVQGLA-----SRNIV 497
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI--- 283
KI S G +H A++ GEVY+WG G G+LGH GD L P+ + A G
Sbjct: 498 KIAAHSDG-HHYLALAATGEVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAG 551
Query: 284 -FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
+ +ACG +S A+T++G LY WG G+LG G + IP+LV
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-------------SSEDEAIPMLV 598
Query: 343 V-PNGVQL--VAC--GHSHTLVYMRDGRIHGWGYNSYGQ 376
G+++ VAC G + TL +G++ WG YG+
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG + G G + +R P+Q+ + + IA G H DG
Sbjct: 4219 AVYTWGKGDYHRLGH-GSDDHVRRPRQVQ-------GLQGKKVIAIATGSLHCVCCTEDG 4270
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
++TWG N+ GQLGDGT + P V LQ + V ++CG+ T A
Sbjct: 4271 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4317
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 83/224 (37%), Gaps = 39/224 (17%)
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G+ Y + I CEGL V+ QV+C E +S NG VYT
Sbjct: 433 GWKYYANVIGPIQCEGLASLGVM-----------------QVACAEKRFLILSRNGRVYT 475
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWGG 309
S L P+ V L I +A G H AL + G +Y+WG
Sbjct: 476 QAYNS-------------DMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGC 522
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGW 369
G+LG G +P E V +ACG +++ +G ++ W
Sbjct: 523 GDGGRLGHG------DTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTW 576
Query: 370 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLA 412
G +YG+ + S P V G +V +A G G + LA
Sbjct: 577 GRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 620
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 82/218 (37%), Gaps = 62/218 (28%)
Query: 246 NGEVYTWGLGSVGQLG--------------------HCSLQSGDKELL------------ 273
+G +Y WG GQLG L G++ L
Sbjct: 3953 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4012
Query: 274 -----------------PRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWGGSQAGQ 314
P + ++ +FIK VA GG H AL+S+G +Y+WG ++ G+
Sbjct: 4013 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4072
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LG G RS P ++ R I ++ VA G +H+ G ++ WG Y
Sbjct: 4073 LGHG--NRSPCDRPRVIES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRY 4122
Query: 375 GQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
G+ + S P V+ G V +A G G + L
Sbjct: 4123 GRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTL 4160
>gi|74144437|dbj|BAE36068.1| unnamed protein product [Mus musculus]
Length = 527
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 116/233 (49%), Gaps = 24/233 (10%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H+V + G + WG+N Y QLG G T GL + + +++ +V+CG
Sbjct: 86 HIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN--------KQVIEVACGS 137
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHSC 296
YHS ++ +GEV+ WG + GQ+G S + + +PRRV L + ++ACG + S
Sbjct: 138 YHSLVLTSDGEVFAWGYNNSGQVGSGSTAN---QPIPRRVTGCLQNKVVMNIACGQMCSM 194
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G +Y WG + GQLGLG + + R VQ VACG++H
Sbjct: 195 AVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR----------VQRVACGYAH 244
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
TLV +G+I+ WG NSYGQ + YP+PV V + R + HSA
Sbjct: 245 TLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPV--VVEKDRIIEIAACHSA 295
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 135/298 (45%), Gaps = 39/298 (13%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F G N G LG G + P ++ L + + S+S G+ +A DG + T
Sbjct: 43 IFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLAT---TDGEVFT- 98
Query: 143 RLWVWGQNQGSNFPR---------LFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
WG N S N + +V+CGS H + L+ G + AWGY
Sbjct: 99 ----WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 154
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
N GQ+G G T PR + G + + + ++CG+ S AV + GEVY WG
Sbjct: 155 NNSGQVGSGSTANQ-PIPRRVTG-------CLQNKVVMNIACGQMCSMAVVDTGEVYVWG 206
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
GQLG L S + P RV AL GI ++ VACG H+ LT +G +YAWG + G
Sbjct: 207 YNGNGQLG---LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 263
Query: 314 QLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRIHGWG 370
QLG G N+S+ + ++ +++ AC +HT + G ++ WG
Sbjct: 264 QLGTG----------NKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 115/243 (47%), Gaps = 39/243 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G +P + L +N + +++ACG H+ + SDG
Sbjct: 96 VFTWGHNAYSQLG-NGTTNHGLVPCHISTNL------SNKQVIEVACGSYHSLVLTSDGE 148
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P +V LQ++ V +I+CG C+ A+ + T
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAV---------VDT 199
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N N P A + +V+CG H + L++ G + AWG
Sbjct: 200 GEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGA 259
Query: 194 NEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G + + P V+ E ++I ++ +C H SAA ++ G VY
Sbjct: 260 NSYGQLGTGNKSNQSYPTPVVV-----------EKDRIIEIAACHSAHTSAAKTQGGHVY 308
Query: 251 TWG 253
WG
Sbjct: 309 MWG 311
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 18/131 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G Q P A R +ACG+ HT + +G
Sbjct: 202 VYVWGYNGNGQLGLGSSGNQ--------PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 253
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
++ WGAN +GQLG G + + +P V + ++ +C AH +AA +
Sbjct: 254 IYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQG--------- 304
Query: 142 SRLWVWGQNQG 152
+++WGQ +G
Sbjct: 305 GHVYMWGQCRG 315
>gi|169808411|ref|NP_082040.2| RCC1 and BTB domain-containing protein 1 [Mus musculus]
gi|26329171|dbj|BAC28324.1| unnamed protein product [Mus musculus]
gi|148704196|gb|EDL36143.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1, isoform CRA_a [Mus musculus]
Length = 531
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 152/367 (41%), Gaps = 83/367 (22%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G +A + ++V+G N+S G G + +PK+L G + L
Sbjct: 26 VFGTSANEAIYVTDNDEVFVFGLNYSNCLG-TGDNQSTLVPKKLEA-----LCGKKIKSL 79
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
G H DG ++ WG N + QLG+GT P +V C
Sbjct: 80 SYGSG-PHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQV----------------C 122
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
T + + + +V+CGS H +AL+
Sbjct: 123 TNLLIKQ------------------------------------VIEVACGSHHSMALAAD 146
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G L AWGYN GQ+G G T PR + +++ ++CG+ S AV +
Sbjct: 147 GELFAWGYNNCGQVGSGSTANQ-PTPRKVT-------NCLHTKRVVNIACGQTSSMAVLD 198
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+GEVY WG GQLG L + +L P RV AL G+ + + CG H+ ALT +G LY
Sbjct: 199 SGEVYGWGYNGNGQLG---LGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLY 255
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV-QLVACGHSHT-LVYMRD 363
AWG + GQLG G + S P + I+V V ++ AC +HT +
Sbjct: 256 AWGANTYGQLGTGSKNNLLS--PTQ---------IMVEKERVIEIAACHSTHTSAAKTQG 304
Query: 364 GRIHGWG 370
G ++ WG
Sbjct: 305 GHVYMWG 311
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 28/203 (13%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HV+ +E G++ AWG+N Y QLG G T +G+ +V ++++ +V+CG
Sbjct: 86 HVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLL--------IKQVIEVACGS 137
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHSC 296
+HS A++ +GE++ WG + GQ+G S + + PR+V L + ++ACG S
Sbjct: 138 HHSMALAADGELFAWGYNNCGQVGSGSTAN---QPTPRKVTNCLHTKRVVNIACGQTSSM 194
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLVACG 353
A+ G +Y WG + GQLGLG + P+ V V + CG
Sbjct: 195 AVLDSGEVYGWGYNGNGQLGLGNNGNQLT-------------PVRVAALHGMCVNQIVCG 241
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQ 376
++HTL +G ++ WG N+YGQ
Sbjct: 242 YAHTLALTDEGLLYAWGANTYGQ 264
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 81/173 (46%), Gaps = 17/173 (9%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHSCALT 299
V++N EV+ +GL LG +GD + L+P+++ AL G IK ++ G G H T
Sbjct: 37 VTDNDEVFVFGLNYSNCLG-----TGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTT 91
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
G +YAWG + QLG G + + + ++ + V VACG H++
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQ---------VIEVACGSHHSMA 142
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
DG + WGYN+ GQ + + P V C+ R + G ++ +A
Sbjct: 143 LAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMA 195
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 18/150 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WGYN +GQ G QL P ++ C I CG+ HT A+ +G
Sbjct: 202 VYGWGYNGNGQLGLGNNGNQLT-PVRVAALHGMCVN-------QIVCGYAHTLALTDEGL 253
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+ WGAN +GQLG G++ P ++ + ++ +C + T+A
Sbjct: 254 LYAWGANTYGQLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSA--------AKTQGG 305
Query: 143 RLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L T + C
Sbjct: 306 HVYMWGQCRGQSVILPHLTHFCCTDDVFAC 335
>gi|282395057|ref|NP_598844.3| RCC1 and BTB domain-containing protein 2 [Mus musculus]
gi|282396060|ref|NP_001164165.1| RCC1 and BTB domain-containing protein 2 [Mus musculus]
gi|81880241|sp|Q99LJ7.1|RCBT2_MOUSE RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|13096854|gb|AAH03224.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Mus musculus]
gi|26327151|dbj|BAC27319.1| unnamed protein product [Mus musculus]
gi|148703914|gb|EDL35861.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_a [Mus musculus]
gi|339779805|gb|AEK06433.1| RC/BTB2 [Mus musculus]
gi|339779807|gb|AEK06434.1| RC/BTB2 [Mus musculus]
Length = 551
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 116/233 (49%), Gaps = 24/233 (10%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H+V + G + WG+N Y QLG G T GL + + +++ +V+CG
Sbjct: 110 HIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN--------KQVIEVACGS 161
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHSC 296
YHS ++ +GEV+ WG + GQ+G S + + +PRRV L + ++ACG + S
Sbjct: 162 YHSLVLTSDGEVFAWGYNNSGQVGSGSTAN---QPIPRRVTGCLQNKVVMNIACGQMCSM 218
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G +Y WG + GQLGLG + + R VQ VACG++H
Sbjct: 219 AVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR----------VQRVACGYAH 268
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
TLV +G+I+ WG NSYGQ + YP+PV V + R + HSA
Sbjct: 269 TLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPV--VVEKDRIIEIAACHSA 319
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 135/298 (45%), Gaps = 39/298 (13%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F G N G LG G + P ++ L + + S+S G+ +A DG + T
Sbjct: 67 IFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLAT---TDGEVFT- 122
Query: 143 RLWVWGQNQGSNFPR---------LFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
WG N S N + +V+CGS H + L+ G + AWGY
Sbjct: 123 ----WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
N GQ+G G T PR + G + + + ++CG+ S AV + GEVY WG
Sbjct: 179 NNSGQVGSGSTANQ-PIPRRVTG-------CLQNKVVMNIACGQMCSMAVVDTGEVYVWG 230
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
GQLG L S + P RV AL GI ++ VACG H+ LT +G +YAWG + G
Sbjct: 231 YNGNGQLG---LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 287
Query: 314 QLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRIHGWG 370
QLG G N+S+ + ++ +++ AC +HT + G ++ WG
Sbjct: 288 QLGTG----------NKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 115/243 (47%), Gaps = 39/243 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G +P + L +N + +++ACG H+ + SDG
Sbjct: 120 VFTWGHNAYSQLG-NGTTNHGLVPCHISTNL------SNKQVIEVACGSYHSLVLTSDGE 172
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P +V LQ++ V +I+CG C+ A+ + T
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAV---------VDT 223
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N N P A + +V+CG H + L++ G + AWG
Sbjct: 224 GEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGA 283
Query: 194 NEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G + + P V+ E ++I ++ +C H SAA ++ G VY
Sbjct: 284 NSYGQLGTGNKSNQSYPTPVVV-----------EKDRIIEIAACHSAHTSAAKTQGGHVY 332
Query: 251 TWG 253
WG
Sbjct: 333 MWG 335
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 18/133 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G Q P A R +ACG+ HT + +G
Sbjct: 226 VYVWGYNGNGQLGLGSSGNQ--------PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 277
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
++ WGAN +GQLG G + + +P V + ++ +C AH +AA +
Sbjct: 278 IYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQG--------- 328
Query: 142 SRLWVWGQNQGSN 154
+++WGQ +G +
Sbjct: 329 GHVYMWGQCRGQS 341
>gi|77403863|tpg|DAA05713.1| TPA_exp: RPGR ORF15 isoform [Homo sapiens]
Length = 1152
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 161/354 (45%), Gaps = 49/354 (13%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIP---KQLPPELFGCPAGANSRWLDIACGHEH 73
+ + +Y++G N+ GQ G G + + P K L PE ACG H
Sbjct: 50 VTGNNKLYMFGSNNWGQLGL-GSKSAISKPTCVKALKPEKVKL----------AACGRNH 98
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF-VKSISCGAHCTAAIAEP 132
T G ++ G N GQLG G E R + SE +K +S G++ +AA+ E
Sbjct: 99 TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTE- 157
Query: 133 RENDGTISTSRLWVWGQN-QGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECG 186
DG RL++WG N +G + P + + +SCG H ++ G
Sbjct: 158 ---DG-----RLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDG 209
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
L +G E G+LG + + L R + + E PE K+ QV+CG H+ ++EN
Sbjct: 210 ELYVFGEPENGKLG--LPNQLLGNHRT----PQLVSEIPE--KVIQVACGGEHTVVLTEN 261
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
VYT+GLG GQLG + E P+ + + I ++CG H+ +T G +Y
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSE--PKVIENIRDQTISYISCGENHTALITDIGLMYT 318
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+G + G+LGLG + + IP + R I V+LVACG H +V+
Sbjct: 319 FGDGRHGKLGLGLENFTNHFIPTLCSNFLRFI--------VKLVACGGCHMVVF 364
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 167/360 (46%), Gaps = 36/360 (10%)
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
N + ++CG EH+A V + L+ +G+N +GQLG G++ P VK L+ E VK +
Sbjct: 34 NDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAA 93
Query: 121 CGAHCTAAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVH 178
CG + T E G + +L + + + F + + FT I Q+S GS
Sbjct: 94 CGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISF--FTSEHKIKQLSAGSNT 151
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
AL+E G L WG N GQ+G +V G + ++ +SCG Y
Sbjct: 152 SAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIG-----------KPVSWISCGYY 200
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
HSA V+ +GE+Y +G G+LG + G+ P+ V + I+ VACGG H+ L
Sbjct: 201 HSAFVTTDGELYVFGEPENGKLGLPNQLLGNHR-TPQLVSEIPEKVIQ-VACGGEHTVVL 258
Query: 299 TSKGALYAWGGSQAGQLGLGP---QTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS 355
T + A+Y +G Q GQLGLG +T +I N D + ++CG +
Sbjct: 259 T-ENAVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQT------------ISYISCGEN 305
Query: 356 HTLVYMRDGRIHGWGYNSYGQ--AANEKSTYAWYPSPVDWCVGEVRKLAA-GGGHSAVLA 412
HT + G ++ +G +G+ E T + P+ + + KL A GG H V A
Sbjct: 306 HTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFA 365
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 121/284 (42%), Gaps = 51/284 (17%)
Query: 144 LWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
++ +G+++ N P FW N + +SCG H ++ L +G N +GQLG G
Sbjct: 14 VFTFGKSKFAENNPGKFW---FKNDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLG 70
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
+ + P +K A + EK+ +CG H+ +E G VY G + GQLG
Sbjct: 71 -SKSAISKPTCVK--------ALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLG- 120
Query: 263 CSLQSGDKELLPRRVVALDGIF-----IKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GD E R + F IK ++ G S ALT G L+ WG + GQ+GL
Sbjct: 121 ----LGDTE--ERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGL 174
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQL------VACGHSHTLVYMRDGRIHGWGY 371
+N+ + VP V + ++CG+ H+ DG ++ +G
Sbjct: 175 ------------------KNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVFGE 216
Query: 372 NSYGQAANEKSTYAWYPSP--VDWCVGEVRKLAAGGGHSAVLAD 413
G+ + +P V +V ++A GG H+ VL +
Sbjct: 217 PENGKLGLPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTE 260
>gi|301094633|ref|XP_002896421.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262109510|gb|EEY67562.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 1289
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/304 (33%), Positives = 137/304 (45%), Gaps = 38/304 (12%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ACG +H+ A+ G L+TWG+ E G+LG G R P KV L E V S SCG T
Sbjct: 558 VACGAQHSLAITDAGELYTWGSGEDGRLGHGDMRDRAVPRKVMSLLRESVVSASCGGAHT 617
Query: 127 AAIAEPRENDGTIST------SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVV 180
A + G++ T RL + G N+ + P G F T I V CG
Sbjct: 618 AVLTA----KGSVFTFGRGRNGRLGL-GDNKWRDTPHPIVG-FPQGTSISLVVCGWNFTA 671
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
AL G + WG GQ G G PR + K D A + V+CG H+
Sbjct: 672 ALDRQGSVFTWGKTGEGQCGLGYVDRDQVVPRCVD---KLRDVAG--SSVVDVACGYTHT 726
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGD-KELLPRRV-VALDGIFIKD----VACGGVH 294
++ +GE+Y+WGLG GQLG +GD + LP RV + D + D V CG H
Sbjct: 727 VVLTASGELYSWGLGEYGQLG-----TGDVYQPLPARVQLPADALCAPDQLARVYCGAFH 781
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGH 354
S A T + ++AWG + G GLG P D + + +VACGH
Sbjct: 782 SIATTEQRVMFAWGLNSYGACGLGHTANKDK--PERIDCFSSQTEL--------VVACGH 831
Query: 355 SHTL 358
+T+
Sbjct: 832 KYTI 835
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 128/268 (47%), Gaps = 46/268 (17%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLG-----------------RGITCEGLQGP 211
I QV+CG H++ L+ G + ++G NE ++ R ++ P
Sbjct: 479 IVQVACGGEHLLYLTSTGDVYSYGDNEDKKVAAVTVATHTSTLPDNESTRVVSTSSFLAP 538
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
+++ A L++A I V+CG HS A+++ GE+YTWG G G+LGH ++
Sbjct: 539 HLVEELA--LEKALHRTTIAMVACGAQHSLAITDAGELYTWGSGEDGRLGHGDMRD---R 593
Query: 272 LLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNES 331
+PR+V++L + +CGG H+ LT+KG+++ +G + G+LGLG
Sbjct: 594 AVPRKVMSLLRESVVSASCGGAHTAVLTAKGSVFTFGRGRNGRLGLG------------- 640
Query: 332 DTYFRNI--PILVVPNG--VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWY 387
D +R+ PI+ P G + LV CG + T R G + WG GQ Y
Sbjct: 641 DNKWRDTPHPIVGFPQGTSISLVVCGWNFTAALDRQGSVFTWGKTGEGQCG---LGYVDR 697
Query: 388 PSPVDWCVGEVRKLAAGGGHSAVLADAC 415
V CV ++R +A S+V+ AC
Sbjct: 698 DQVVPRCVDKLRDVAG----SSVVDVAC 721
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 151/357 (42%), Gaps = 59/357 (16%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S +YVWG S + G P L P+ G + +ACG EH + S
Sbjct: 447 SCMYVWGRPPSLEGG---------TPLVLRPKHVSLANG--QPIVQVACGGEHLLYLTST 495
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G ++++G NE + V +++ H T+ + + E+ +S
Sbjct: 496 GDVYSYGDNE----------------------DKKVAAVTVATH-TSTLPD-NESTRVVS 531
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLG 200
TS + + T I V+CG+ H +A+++ G L WG E G+LG
Sbjct: 532 TSSFLAPHLVEELALEKALH-----RTTIAMVACGAQHSLAITDAGELYTWGSGEDGRLG 586
Query: 201 RGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQL 260
G PR + + E + SCG H+A ++ G V+T+G G G+L
Sbjct: 587 HG-DMRDRAVPRKVMSLLR--------ESVVSASCGGAHTAVLTAKGSVFTFGRGRNGRL 637
Query: 261 GHCSLQSGDKELLPRRVVAL-DGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
G + D P +V G I V CG + AL +G+++ WG + GQ GLG
Sbjct: 638 GLGDNKWRDT---PHPIVGFPQGTSISLVVCGWNFTAALDRQGSVFTWGKTGEGQCGLGY 694
Query: 320 QTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
R ++P D R+ V + V VACG++HT+V G ++ WG YGQ
Sbjct: 695 VDRD-QVVPRCVDK-LRD----VAGSSVVDVACGYTHTVVLTASGELYSWGLGEYGQ 745
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 139/324 (42%), Gaps = 46/324 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G G R +P+++ L A +CG HTA + + G+
Sbjct: 574 LYTWGSGEDGRLGH-GDMRDRAVPRKVMSLLRESVVSA-------SCGGAHTAVLTAKGS 625
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQL-QSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+FT+G G+LG G + R P + Q + + CG + TAA+ + G++ T
Sbjct: 626 VFTFGRGRNGRLGLGDNKWRDTPHPIVGFPQGTSISLVVCGWNFTAAL----DRQGSVFT 681
Query: 142 SRLWVWGQ-----------NQGSNFPRLFWGAF-TPNTIICQVSCGSVHVVALSECGLLQ 189
WG+ ++ PR + + V+CG H V L+ G L
Sbjct: 682 -----WGKTGEGQCGLGYVDRDQVVPRCVDKLRDVAGSSVVDVACGYTHTVVLTASGELY 736
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
+WG EYGQLG G + L P ++ A L AP+ ++ +V CG +HS A +E +
Sbjct: 737 SWGLGEYGQLGTGDVYQPL--PARVQLPADALC-APD--QLARVYCGAFHSIATTEQRVM 791
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
+ WGL S G G + DK P R+ VACG ++ AL +LY
Sbjct: 792 FAWGLNSYGACGLGHTANKDK---PERIDCFSSQTELVVACGHKYTIALEVNASLYTHSP 848
Query: 310 SQA--------GQLGLGPQTRSFS 325
SQ L + P TR S
Sbjct: 849 SQTMLPTGAALNGLEMPPSTRQVS 872
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 90/230 (39%), Gaps = 62/230 (26%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+++ WG GQ G +R +P+ + A S +D+ACG+ HT + + G
Sbjct: 678 SVFTWGKTGEGQCGLGYVDRDQVVPRCVD----KLRDVAGSSVVDVACGYTHTVVLTASG 733
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
L++WG E+GQLG G + + P +V+ + A C
Sbjct: 734 ELYSWGLGEYGQLGTG-DVYQPLPARVQ---------LPADALCAP-------------- 769
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGR 201
R++ GAF H +A +E ++ AWG N YG G
Sbjct: 770 -----------DQLARVYCGAF--------------HSIATTEQRVMFAWGLNSYGACGL 804
Query: 202 GITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G T P I ++ + E + V+CG ++ A+ N +YT
Sbjct: 805 GHTANK-DKPERIDCFSS------QTELV--VACGHKYTIALEVNASLYT 845
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 76/188 (40%), Gaps = 37/188 (19%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWG------LGSVGQLGHCS---------LQSGDKEL 272
+ I QV+CG H ++ G+VY++G + +V H S + S L
Sbjct: 477 QPIVQVACGGEHLLYLTSTGDVYSYGDNEDKKVAAVTVATHTSTLPDNESTRVVSTSSFL 536
Query: 273 LPRRV------VALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSL 326
P V AL I VACG HS A+T G LY WG + G+LG G
Sbjct: 537 APHLVEELALEKALHRTTIAMVACGAQHSLAITDAGELYTWGSGEDGRLGHG-------- 588
Query: 327 IPNESDTYFRNIP---ILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKST 383
D R +P + ++ V +CG +HT V G + +G G+ +
Sbjct: 589 -----DMRDRAVPRKVMSLLRESVVSASCGGAHTAVLTAKGSVFTFGRGRNGRLGLGDNK 643
Query: 384 YAWYPSPV 391
+ P P+
Sbjct: 644 WRDTPHPI 651
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 75/179 (41%), Gaps = 23/179 (12%)
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELL-PRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
+Y WG SL+ G +L P+ V +G I VACGG H LTS G +Y++
Sbjct: 449 MYVWGRPP-------SLEGGTPLVLRPKHVSLANGQPIVQVACGGEHLLYLTSTGDVYSY 501
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------------LVACG 353
G ++ ++ S +P+ T + + P+ V+ +VACG
Sbjct: 502 GDNEDKKVAAVTVATHTSTLPDNESTRVVSTSSFLAPHLVEELALEKALHRTTIAMVACG 561
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 411
H+L G ++ WG G+ + P V + E V + GG H+AVL
Sbjct: 562 AQHSLAITDAGELYTWGSGEDGRLGHGDMRDRAVPRKVMSLLRESVVSASCGGAHTAVL 620
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 4/113 (3%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG GQ G + L QLP + P + + CG H+ A
Sbjct: 729 LTASGELYSWGLGEYGQLGTGDVYQPLPARVQLPADALCAP----DQLARVYCGAFHSIA 784
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAI 129
+F WG N +G G G + PE++ S+ ++CG T A+
Sbjct: 785 TTEQRVMFAWGLNSYGACGLGHTANKDKPERIDCFSSQTELVVACGHKYTIAL 837
>gi|148704197|gb|EDL36144.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1, isoform CRA_b [Mus musculus]
Length = 563
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 152/367 (41%), Gaps = 83/367 (22%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G +A + ++V+G N+S G G + +PK+L G + L
Sbjct: 58 VFGTSANEAIYVTDNDEVFVFGLNYSNCLG-TGDNQSTLVPKKLEA-----LCGKKIKSL 111
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
G H DG ++ WG N + QLG+GT P +V C
Sbjct: 112 SYGSG-PHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQV----------------C 154
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
T + + + +V+CGS H +AL+
Sbjct: 155 TNLLIKQ------------------------------------VIEVACGSHHSMALAAD 178
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G L AWGYN GQ+G G T PR + +++ ++CG+ S AV +
Sbjct: 179 GELFAWGYNNCGQVGSGSTANQ-PTPRKVT-------NCLHTKRVVNIACGQTSSMAVLD 230
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+GEVY WG GQLG L + +L P RV AL G+ + + CG H+ ALT +G LY
Sbjct: 231 SGEVYGWGYNGNGQLG---LGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLY 287
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV-QLVACGHSHT-LVYMRD 363
AWG + GQLG G + S P + I+V V ++ AC +HT +
Sbjct: 288 AWGANTYGQLGTGSKNNLLS--PTQ---------IMVEKERVIEIAACHSTHTSAAKTQG 336
Query: 364 GRIHGWG 370
G ++ WG
Sbjct: 337 GHVYMWG 343
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 28/203 (13%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HV+ +E G++ AWG+N Y QLG G T +G+ +V ++++ +V+CG
Sbjct: 118 HVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLL--------IKQVIEVACGS 169
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHSC 296
+HS A++ +GE++ WG + GQ+G S + + PR+V L + ++ACG S
Sbjct: 170 HHSMALAADGELFAWGYNNCGQVGSGSTAN---QPTPRKVTNCLHTKRVVNIACGQTSSM 226
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLVACG 353
A+ G +Y WG + GQLGLG + P+ V V + CG
Sbjct: 227 AVLDSGEVYGWGYNGNGQLGLGNNGNQLT-------------PVRVAALHGMCVNQIVCG 273
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQ 376
++HTL +G ++ WG N+YGQ
Sbjct: 274 YAHTLALTDEGLLYAWGANTYGQ 296
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 87/194 (44%), Gaps = 17/194 (8%)
Query: 222 DEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVA 279
+EA + K + V++N EV+ +GL LG +GD + L+P+++ A
Sbjct: 48 EEAGSIRKACVFGTSANEAIYVTDNDEVFVFGLNYSNCLG-----TGDNQSTLVPKKLEA 102
Query: 280 LDGIFIKDVACG-GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
L G IK ++ G G H T G +YAWG + QLG G + + + ++ +
Sbjct: 103 LCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQ- 161
Query: 339 PILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEV 398
V VACG H++ DG + WGYN+ GQ + + P V C+
Sbjct: 162 --------VIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTK 213
Query: 399 RKLAAGGGHSAVLA 412
R + G ++ +A
Sbjct: 214 RVVNIACGQTSSMA 227
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 18/150 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WGYN +GQ G QL P ++ C I CG+ HT A+ +G
Sbjct: 234 VYGWGYNGNGQLGLGNNGNQL-TPVRVAALHGMCVN-------QIVCGYAHTLALTDEGL 285
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+ WGAN +GQLG G++ P ++ + ++ +C + T+A
Sbjct: 286 LYAWGANTYGQLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSA--------AKTQGG 337
Query: 143 RLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L T + C
Sbjct: 338 HVYMWGQCRGQSVILPHLTHFCCTDDVFAC 367
>gi|148703915|gb|EDL35862.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Mus musculus]
gi|148703916|gb|EDL35863.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Mus musculus]
Length = 560
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 116/233 (49%), Gaps = 24/233 (10%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H+V + G + WG+N Y QLG G T GL + + +++ +V+CG
Sbjct: 119 HIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN--------KQVIEVACGS 170
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHSC 296
YHS ++ +GEV+ WG + GQ+G S + + +PRRV L + ++ACG + S
Sbjct: 171 YHSLVLTSDGEVFAWGYNNSGQVGSGSTAN---QPIPRRVTGCLQNKVVMNIACGQMCSM 227
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G +Y WG + GQLGLG + + R VQ VACG++H
Sbjct: 228 AVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR----------VQRVACGYAH 277
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
TLV +G+I+ WG NSYGQ + YP+PV V + R + HSA
Sbjct: 278 TLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPV--VVEKDRIIEIAACHSA 328
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 135/298 (45%), Gaps = 39/298 (13%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F G N G LG G + P ++ L + + S+S G+ +A DG + T
Sbjct: 76 IFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLAT---TDGEVFT- 131
Query: 143 RLWVWGQNQGSNFPR---------LFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
WG N S N + +V+CGS H + L+ G + AWGY
Sbjct: 132 ----WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 187
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
N GQ+G G T PR + G + + + ++CG+ S AV + GEVY WG
Sbjct: 188 NNSGQVGSGSTANQ-PIPRRVTG-------CLQNKVVMNIACGQMCSMAVVDTGEVYVWG 239
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
GQLG L S + P RV AL GI ++ VACG H+ LT +G +YAWG + G
Sbjct: 240 YNGNGQLG---LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 296
Query: 314 QLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRIHGWG 370
QLG G N+S+ + ++ +++ AC +HT + G ++ WG
Sbjct: 297 QLGTG----------NKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 344
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 115/243 (47%), Gaps = 39/243 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G +P + L +N + +++ACG H+ + SDG
Sbjct: 129 VFTWGHNAYSQLG-NGTTNHGLVPCHISTNL------SNKQVIEVACGSYHSLVLTSDGE 181
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P +V LQ++ V +I+CG C+ A+ + T
Sbjct: 182 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAV---------VDT 232
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N N P A + +V+CG H + L++ G + AWG
Sbjct: 233 GEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGA 292
Query: 194 NEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G + + P V+ E ++I ++ +C H SAA ++ G VY
Sbjct: 293 NSYGQLGTGNKSNQSYPTPVVV-----------EKDRIIEIAACHSAHTSAAKTQGGHVY 341
Query: 251 TWG 253
WG
Sbjct: 342 MWG 344
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 18/133 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G Q P A R +ACG+ HT + +G
Sbjct: 235 VYVWGYNGNGQLGLGSSGNQ--------PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 286
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
++ WGAN +GQLG G + + +P V + ++ +C AH +AA +
Sbjct: 287 IYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQG--------- 337
Query: 142 SRLWVWGQNQGSN 154
+++WGQ +G +
Sbjct: 338 GHVYMWGQCRGQS 350
>gi|78190492|ref|NP_001030025.1| X-linked retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 161/354 (45%), Gaps = 49/354 (13%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIP---KQLPPELFGCPAGANSRWLDIACGHEH 73
+ + +Y++G N+ GQ G G + + P K L PE ACG H
Sbjct: 50 VTGNNKLYMFGSNNWGQLGL-GSKSAISKPTCVKALKPEKVKL----------AACGRNH 98
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF-VKSISCGAHCTAAIAEP 132
T G ++ G N GQLG G E R + SE +K +S G++ +AA+ E
Sbjct: 99 TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTE- 157
Query: 133 RENDGTISTSRLWVWGQN-QGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECG 186
DG RL++WG N +G + P + + +SCG H ++ G
Sbjct: 158 ---DG-----RLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDG 209
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
L +G E G+LG + + L R + + E PE K+ QV+CG H+ ++EN
Sbjct: 210 ELYVFGEPENGKLG--LPNQLLGNHRT----PQLVSEIPE--KVIQVACGGEHTVVLTEN 261
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
VYT+GLG GQLG + E P+ + + I ++CG H+ +T G +Y
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSE--PKVIENIRDQTISYISCGENHTALITDIGLMYT 318
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+G + G+LGLG + + IP + R I V+LVACG H +V+
Sbjct: 319 FGDGRHGKLGLGLENFTNHFIPTLCSNFLRFI--------VKLVACGGCHMVVF 364
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 167/360 (46%), Gaps = 36/360 (10%)
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
N + ++CG EH+A V + L+ +G+N +GQLG G++ P VK L+ E VK +
Sbjct: 34 NDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAA 93
Query: 121 CGAHCTAAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVH 178
CG + T E G + +L + + + F + + FT I Q+S GS
Sbjct: 94 CGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISF--FTSEHKIKQLSAGSNT 151
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
AL+E G L WG N GQ+G +V G + ++ +SCG Y
Sbjct: 152 SAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIG-----------KPVSWISCGYY 200
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
HSA V+ +GE+Y +G G+LG + G+ P+ V + I+ VACGG H+ L
Sbjct: 201 HSAFVTTDGELYVFGEPENGKLGLPNQLLGNHR-TPQLVSEIPEKVIQ-VACGGEHTVVL 258
Query: 299 TSKGALYAWGGSQAGQLGLGP---QTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS 355
T + A+Y +G Q GQLGLG +T +I N D + ++CG +
Sbjct: 259 T-ENAVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQT------------ISYISCGEN 305
Query: 356 HTLVYMRDGRIHGWGYNSYGQ--AANEKSTYAWYPSPVDWCVGEVRKLAA-GGGHSAVLA 412
HT + G ++ +G +G+ E T + P+ + + KL A GG H V A
Sbjct: 306 HTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFA 365
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 121/284 (42%), Gaps = 51/284 (17%)
Query: 144 LWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
++ +G+++ N P FW N + +SCG H ++ L +G N +GQLG G
Sbjct: 14 VFTFGKSKFAENNPGKFW---FKNDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLG 70
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
+ + P +K A + EK+ +CG H+ +E G VY G + GQLG
Sbjct: 71 -SKSAISKPTCVK--------ALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLG- 120
Query: 263 CSLQSGDKELLPRRVVALDGIF-----IKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GD E R + F IK ++ G S ALT G L+ WG + GQ+GL
Sbjct: 121 ----LGDTE--ERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGL 174
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQL------VACGHSHTLVYMRDGRIHGWGY 371
+N+ + VP V + ++CG+ H+ DG ++ +G
Sbjct: 175 ------------------KNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVFGE 216
Query: 372 NSYGQAANEKSTYAWYPSP--VDWCVGEVRKLAAGGGHSAVLAD 413
G+ + +P V +V ++A GG H+ VL +
Sbjct: 217 PENGKLGLPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTE 260
>gi|157821577|ref|NP_001101850.1| RCC1 and BTB domain-containing protein 1 [Rattus norvegicus]
gi|149064107|gb|EDM14377.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Rattus norvegicus]
Length = 531
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 152/367 (41%), Gaps = 83/367 (22%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G +A + ++V+G N+S G G + +PK+L G + L
Sbjct: 26 VFGISASEAIYVTDSDEVFVFGLNYSNCLG-TGDNQSTLVPKKLEA-----LCGKRIKSL 79
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
G H DG ++ WG N + QLG+GT P +V C
Sbjct: 80 SYGSG-PHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQV----------------C 122
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
T + + + +V+CGS H +AL+
Sbjct: 123 TNLLVKQ------------------------------------VVEVACGSHHSMALAAD 146
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G L AWGYN GQ+G G T PR + +K+ ++CG+ S AV +
Sbjct: 147 GELFAWGYNNCGQVGSGSTANQ-PTPRKVT-------NCLHTKKVVNIACGQTSSMAVLD 198
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+GEVY WG GQLG L + +L P RV AL G+ + + CG H+ ALT +G LY
Sbjct: 199 SGEVYGWGYNGNGQLG---LGNNGNQLTPVRVAALHGVCVNQIVCGYAHTLALTDEGLLY 255
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV-QLVACGHSHT-LVYMRD 363
AWG + GQLG G + S P + I+V V ++ AC +HT +
Sbjct: 256 AWGANTYGQLGTGSKNNLLS--PTQ---------IMVEKERVIEIAACHSTHTSAAKTQG 304
Query: 364 GRIHGWG 370
G ++ WG
Sbjct: 305 GHVYMWG 311
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 107/203 (52%), Gaps = 28/203 (13%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HV+ +E G++ AWG+N Y QLG G T +G+ +V ++++ +V+CG
Sbjct: 86 HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLL--------VKQVVEVACGS 137
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHSC 296
+HS A++ +GE++ WG + GQ+G S + + PR+V L + ++ACG S
Sbjct: 138 HHSMALAADGELFAWGYNNCGQVGSGSTAN---QPTPRKVTNCLHTKKVVNIACGQTSSM 194
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQL--VACG 353
A+ G +Y WG + GQLGLG + P+ V +GV + + CG
Sbjct: 195 AVLDSGEVYGWGYNGNGQLGLGNNGNQLT-------------PVRVAALHGVCVNQIVCG 241
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQ 376
++HTL +G ++ WG N+YGQ
Sbjct: 242 YAHTLALTDEGLLYAWGANTYGQ 264
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 86/177 (48%), Gaps = 19/177 (10%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHSCALT 299
V+++ EV+ +GL LG +GD + L+P+++ AL G IK ++ G G H T
Sbjct: 37 VTDSDEVFVFGLNYSNCLG-----TGDNQSTLVPKKLEALCGKRIKSLSYGSGPHVLLST 91
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
G +YAWG + QLG G + + I ++ L+V V+ VACG H++
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTN--------LLVKQVVE-VACGSHHSMA 142
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV--GEVRKLAAGGGHSAVLADA 414
DG + WGYN+ GQ + + P V C+ +V +A G S + D+
Sbjct: 143 LAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDS 199
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 68/150 (45%), Gaps = 18/150 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WGYN +GQ G QL P ++ L G I CG+ HT A+ +G
Sbjct: 202 VYGWGYNGNGQLGLGNNGNQLT-PVRVAA-LHGVCVN------QIVCGYAHTLALTDEGL 253
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+ WGAN +GQLG G++ P ++ + ++ +C + T+A
Sbjct: 254 LYAWGANTYGQLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSA--------AKTQGG 305
Query: 143 RLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 306 HVYMWGQCRGQSVILPHLTHFSCTDDVFAC 335
>gi|81885004|sp|Q6NXM2.1|RCBT1_MOUSE RecName: Full=RCC1 and BTB domain-containing protein 1; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 1
gi|44890811|gb|AAH67005.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Mus musculus]
Length = 531
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 152/367 (41%), Gaps = 83/367 (22%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G +A + ++V+G N+S G G + +PK+L G + L
Sbjct: 26 VFGTSANEAIYVTDNDEVFVFGLNYSNCLG-TGDNQSTLVPKKLEA-----LCGKKIKSL 79
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
G H DG ++ WG N + QLG+GT P +V C
Sbjct: 80 SYGSG-PHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQV----------------C 122
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
T + + + +V+CGS H +AL+
Sbjct: 123 TNLLIKQ------------------------------------VIEVACGSHHSMALAAD 146
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G L AWGYN GQ+G G T PR + +++ ++CG+ S AV +
Sbjct: 147 GELFAWGYNNCGQVGSGSTANQ-PTPRKVT-------NCLHTKRVVNIACGQTSSMAVLD 198
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+GEVY WG GQLG L + +L P RV AL G+ + + CG H+ ALT +G LY
Sbjct: 199 SGEVYGWGYNGNGQLG---LGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLY 255
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV-QLVACGHSHT-LVYMRD 363
AWG + GQLG G + S P + I+V V ++ AC +HT +
Sbjct: 256 AWGANTYGQLGTGSKNNLLS--PTQ---------IMVEKERVIEIAACHSTHTSAAKTQG 304
Query: 364 GRIHGWG 370
G ++ WG
Sbjct: 305 GHVYMWG 311
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 28/203 (13%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HV+ +E G++ AWG+N Y QLG G T +G+ +V ++++ +V+CG
Sbjct: 86 HVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLL--------IKQVIEVACGS 137
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHSC 296
+HS A++ +GE++ WG + GQ+G S + + PR+V L + ++ACG S
Sbjct: 138 HHSMALAADGELFAWGYNNCGQVGSGSTAN---QPTPRKVTNCLHTKRVVNIACGQTSSM 194
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLVACG 353
A+ G +Y WG + GQLGLG + P+ V V + CG
Sbjct: 195 AVLDSGEVYGWGYNGNGQLGLGNNGNQLT-------------PVRVAALHGMCVNQIVCG 241
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQ 376
++HTL +G ++ WG N+YGQ
Sbjct: 242 YAHTLALTDEGLLYAWGANTYGQ 264
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 81/173 (46%), Gaps = 17/173 (9%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHSCALT 299
V++N EV+ +GL LG +GD + L+P+++ AL G IK ++ G G H T
Sbjct: 37 VTDNDEVFVFGLNYSNCLG-----TGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTT 91
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
G +YAWG + QLG G + + + ++ + V VACG H++
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQ---------VIEVACGSHHSMA 142
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
DG + WGYN+ GQ + + P V C+ R + G ++ +A
Sbjct: 143 LAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMA 195
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 18/150 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WGYN +GQ G QL P ++ C I CG+ HT A+ +G
Sbjct: 202 VYGWGYNGNGQLGLGNNGNQLT-PVRVAALHGMCVN-------QIVCGYAHTLALTDEGL 253
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+ WGAN +GQLG G++ P ++ + ++ +C + T+A
Sbjct: 254 LYAWGANTYGQLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSA--------AKTQGG 305
Query: 143 RLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L T + C
Sbjct: 306 HVYMWGQCRGQSVILPHLTHFCCTDDVFAC 335
>gi|408501216|ref|YP_006865135.1| RCC1-like protein [Bifidobacterium asteroides PRL2011]
gi|408466040|gb|AFU71569.1| RCC1-like protein [Bifidobacterium asteroides PRL2011]
Length = 1086
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 119/409 (29%), Positives = 168/409 (41%), Gaps = 55/409 (13%)
Query: 24 YVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
Y WGYN++GQ G ER + +P A+ ++ ++ G +H+ A+ SDG
Sbjct: 581 YAWGYNYNGQLGDGTSTERHAPVMVWMPDRKTYPDLPADFTYVQVSAGGQHSLALGSDGN 640
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVK--------QLQSEFVK-SISCGAHCTAAIAEPR 133
+ WG N GQLGDGT GR P +VK L ++F +S G + A+
Sbjct: 641 AYAWGYNVQGQLGDGTGTGRNTPVRVKTPDRKTYPDLPADFTYVQVSAGGQHSLALG--- 697
Query: 134 ENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNT----------IICQVSCG 175
S + WG N +++ R TP+ QVS G
Sbjct: 698 ------SDGNAYAWGYNVNGQLGGGTSNDYRRTPVRVETPDRKTYPDLPADFTYVQVSAG 751
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAK-FLDEAPELEKITQVS 234
H +AL G AWG N GQLG G T P ++K + + P QVS
Sbjct: 752 RYHSLALGSDGNAWAWGSNFEGQLGDG-TGTNRNTPVMVKTPDRSTYPDLPADFTYVQVS 810
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD------- 287
G HS A+ +G + WG + GQLG + SG P RV D D
Sbjct: 811 AGWLHSLALGSDGNAWAWGRNTNGQLGDGT--SGTDRTAPVRVKMPDRNTYPDLPKDFTY 868
Query: 288 --VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
V+ G HS A+ S G +AWG + G LG T ++ N R+ +
Sbjct: 869 AQVSAEGDHSLAVGSDGNAWAWGCNFYGPLGN--NTTNWQGDANPVPKRVRDSANPTDKS 926
Query: 346 GVQL---VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
Q V+ G+ ++L DG + WGYNS GQ + + P PV
Sbjct: 927 KGQQATQVSGGYHYSLALGSDGNAYAWGYNSSGQLGDGTTNDKSVPVPV 975
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 107/365 (29%), Positives = 148/365 (40%), Gaps = 56/365 (15%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV--------KQLQSEFVK- 117
I + + AV SDG + WG N GQLGDGT R P V L ++F
Sbjct: 564 INSNYGFSLAVGSDGNAYAWGYNYNGQLGDGTSTERHAPVMVWMPDRKTYPDLPADFTYV 623
Query: 118 SISCGAHCTAAIAEPRENDGTISTSRLWVWGQN----------QGSNFP-------RLFW 160
+S G + A+ S + WG N G N P R +
Sbjct: 624 QVSAGGQHSLALG---------SDGNAYAWGYNVQGQLGDGTGTGRNTPVRVKTPDRKTY 674
Query: 161 GAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP-RVIKGYAK 219
+ QVS G H +AL G AWGYN GQLG G + + + P RV K
Sbjct: 675 PDLPADFTYVQVSAGGQHSLALGSDGNAYAWGYNVNGQLGGGTSNDYRRTPVRVETPDRK 734
Query: 220 FLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCS---------LQSGDK 270
+ P QVS G YHS A+ +G + WG GQLG + +++ D+
Sbjct: 735 TYPDLPADFTYVQVSAGRYHSLALGSDGNAWAWGSNFEGQLGDGTGTNRNTPVMVKTPDR 794
Query: 271 ELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP----QTRSFSL 326
P + D +++ V+ G +HS AL S G +AWG + GQLG G +T +
Sbjct: 795 STYPD--LPADFTYVQ-VSAGWLHSLALGSDGNAWAWGRNTNGQLGDGTSGTDRTAPVRV 851
Query: 327 IPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAW 386
+ +TY P L V+ H+L DG WG N YG N + +
Sbjct: 852 KMPDRNTY----PDLPKDFTYAQVSAEGDHSLAVGSDGNAWAWGCNFYGPLGNNTTNWQG 907
Query: 387 YPSPV 391
+PV
Sbjct: 908 DANPV 912
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 55/136 (40%), Gaps = 29/136 (21%)
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLI----PNESDTYFRNIPILVVPNGVQLV 350
S A+ S G YAWG + GQLG G T + + P+ + P L V
Sbjct: 571 SLAVGSDGNAYAWGYNYNGQLGDGTSTERHAPVMVWMPDR-----KTYPDLPADFTYVQV 625
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQAAN---------------EKSTYAWYPSPVDWCV 395
+ G H+L DG + WGYN GQ + ++ TY P+ +
Sbjct: 626 SAGGQHSLALGSDGNAYAWGYNVQGQLGDGTGTGRNTPVRVKTPDRKTYPDLPADFTYV- 684
Query: 396 GEVRKLAAGGGHSAVL 411
+++AGG HS L
Sbjct: 685 ----QVSAGGQHSLAL 696
>gi|113205375|gb|AAU93591.2| Zinc finger protein, putative [Solanum demissum]
Length = 1127
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 157/374 (41%), Gaps = 62/374 (16%)
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
+I+CG+ H V G F+WG G+LG G E HP+ +K + V+ I+CG +
Sbjct: 312 NISCGNRHAMLVTKQGEAFSWGEEAGGRLGHGAETDVSHPKLIKNFKGMNVELIACGEYH 371
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSN------------FPRLFWGAFTPNTIICQVS 173
+ A+ S+ L+ WG S+ P+ G + VS
Sbjct: 372 SCAVT---------SSGDLYTWGDGAKSSGLLGHRSEASHWIPKKVCG-LMEGLRVSHVS 421
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
CG H ++ G L +G +G LG G G PR ++ + K +V
Sbjct: 422 CGPWHTALITSAGRLFTFGDGTFGALGHGDR-SGCITPREVETFNGL--------KTLKV 472
Query: 234 SCGEYHSAAVSE-------------NGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVV 278
+CG +H+AAV E +G ++TWG G G+LGH GD + L P+ +
Sbjct: 473 ACGVWHTAAVVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGH-----GDNKPRLAPQCIT 527
Query: 279 ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
AL +VAC + ALT+ G +Y G + GQLG P S I E
Sbjct: 528 ALVDKSFSEVACSYAMTVALTTTGRVYTMGSNVYGQLGC-PLANGMSPICVED------- 579
Query: 339 PILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-E 397
+V + V+ ++CG H V ++ WG GQ + P+ VD +
Sbjct: 580 --YLVDSTVEEISCGSHHVAVLTSRTEVYTWGKGENGQLGHGDCENKCTPTLVDILRDKQ 637
Query: 398 VRKLAAGGGHSAVL 411
V+++ G SA +
Sbjct: 638 VKRIVCGSNFSAAI 651
>gi|428170910|gb|EKX39831.1| hypothetical protein GUITHDRAFT_164838 [Guillardia theta CCMP2712]
Length = 1983
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 118/420 (28%), Positives = 183/420 (43%), Gaps = 64/420 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
IY WG +G+ G P E+ P+ N++ +++ACG EH+ A + DG
Sbjct: 1181 IYTWGCGVNGRLGHG-----FHTGYSTPQEITSFPS--NTKIVEVACGCEHSLARSFDGG 1233
Query: 83 LFTWGANEFGQLGDGTE------EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
++ WGA + GQLG +P+ V L+ F+ SI+CG R ++
Sbjct: 1234 VYAWGAGDRGQLGSLENFDCVKINYAFNPQPVLNLKRYFILSIACG----------RWHN 1283
Query: 137 GTISTSR-LWVWGQNQGSNFPRL----FWGAFTPNTII-------CQVSCGSVHVVALSE 184
T+++ R + WG + F +L TP + C++ CG H A+ E
Sbjct: 1284 MTLTSERQVLSWGAGE---FGQLGLDHNLSKGTPQMVKALDGRAPCKILCGGWHSAAILE 1340
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE-KITQVSCGEYHSAAV 243
G + WG N YGQLG G T + PRV ++ LE K+ G H+ V
Sbjct: 1341 SGKILLWGKNVYGQLGHGDT-KSCSAPRV--------NQYLRLEGKVRTAGLGANHTLVV 1391
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+V+ G GQLG K +P + L+G I VA G HS AL+ G
Sbjct: 1392 MVANKVFAMGSNIDGQLGLDDPSRTGKN-VPVSIEELNGKNICQVAAGDQHSLALSVFGE 1450
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL---VVPNGVQLVACGHSHTLVY 360
+++WGGS GQ LG +T + L P P+L +P V+ +ACG++ +
Sbjct: 1451 VWSWGGSPFGQ--LGHETITDKLAPT---------PLLERHKIPPDVKSIACGYTFSAAM 1499
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSLKEL 420
G + WG G+ + + PS + EV ++A G H A + +K +
Sbjct: 1500 SAKGEVFTWGNGESGELGHAPKVLTYAPSLIK-DFSEVVQIACGFKHMAGIVFKPRMKTI 1558
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 162/375 (43%), Gaps = 58/375 (15%)
Query: 47 KQLPPELFGCPAGANSRWLD--IACGHEHTAAVASDGTLFTWGANEFGQLGDG-----TE 99
++ P E G N+ +LD + + DG ++T+G FG+LG G +E
Sbjct: 479 EKFPSEKILPALGTNTEYLDEFATVQVRDSPSREGDGYIYTYGKGVFGRLGHGVEYTRSE 538
Query: 100 EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQN-QGSNFPRL 158
E KHP++++ L V I+CG TAA+ + T +++ WG++ QG +L
Sbjct: 539 ESVKHPKRIETLAKMSVVFIACGKDSTAALTD---------TGKVYTWGKSAQG----KL 585
Query: 159 FWGAFTP-------------NTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITC 205
G+ P + ++CQ+S G H ++ WG N +GQLG
Sbjct: 586 GLGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMHKFFVWGSNTFGQLGIPHIS 645
Query: 206 EGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSL 265
+ P I L EA I ++CG +H+ + G V + G G GQLGH
Sbjct: 646 SYMPDPYEITS----LREA----NIRSIACGGWHTLISTNTGSVMSCGKGWHGQLGHGDY 697
Query: 266 QS--GDKELLPRRVVALDGI---FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQ 320
+S + LP ++G FI V+ G S A+T+KG L+ WG + + LG +
Sbjct: 698 ESLTALSKTLPYFKKIVEGFGDSFIVKVSAGKESSAAITNKGRLFTWG--KGDEYQLGHE 755
Query: 321 TRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAAN- 379
+ P E + +F I ++ V + G SH L G + WG S GQ +
Sbjct: 756 SSKNEAYPREVE-FFAKIRVVDV-------SIGDSHMLALDYSGLPYSWGNGSAGQLGHG 807
Query: 380 EKSTYAWYPSPVDWC 394
E P P+ C
Sbjct: 808 EMCERETLPRPIMLC 822
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 118/253 (46%), Gaps = 18/253 (7%)
Query: 166 NTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDE-- 223
N ++ + G H + LS G++ + G N YGQLG G P K LD+
Sbjct: 122 NVLVKVCALGKQHTLFLSADGVVLSCGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQ 181
Query: 224 --APELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD 281
L I ++ G YHS A+++ G++++WG GS G+LG S + + PR V +L
Sbjct: 182 AIIQSLNNIVGIAAGYYHSLALNDTGKIFSWGSGSWGKLGIGSDANAES---PRFVASLQ 238
Query: 282 GIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL 341
+ +ACG H+ A+T+ G ++ WG GQLG FS N S
Sbjct: 239 NSKVVHIACGAHHTAAITTVGDVWTWGKGLRGQLGHKSVKEEFSPRLNAS---------- 288
Query: 342 VVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRK 400
+ G Q + CG HTLV +R G+++ G N++GQ +T P+ V E V
Sbjct: 289 LRKCGAQKIRCGDDHTLVILRSGQLYSMGANTHGQLGLGDATDRIIPTLVTGFANEKVID 348
Query: 401 LAAGGGHSAVLAD 413
+ A G S L +
Sbjct: 349 IDAKGCRSIALTN 361
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 133/301 (44%), Gaps = 60/301 (19%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S +++WG +G+ G + E Q +P + PA N A G +HT +++D
Sbjct: 90 SHVFMWGDGENGKLGNQSEEIQ-HVP-------YIVPAFRNVLVKVCALGKQHTLFLSAD 141
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G + + G+N +GQLG G + + ++EP + S
Sbjct: 142 GVVLSCGSNVYGQLGMGDHMLSR----------------------STPVSEPSKQK---S 176
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLG 200
+L Q+ + I ++ G H +AL++ G + +WG +G+LG
Sbjct: 177 LDKLQAIIQSLNN---------------IVGIAAGYYHSLALNDTGKIFSWGSGSWGKLG 221
Query: 201 RGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQL 260
G + PR + K+ ++CG +H+AA++ G+V+TWG G GQL
Sbjct: 222 IGSDANA-ESPRFVASLQN--------SKVVHIACGAHHTAAITTVGDVWTWGKGLRGQL 272
Query: 261 GHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQ 320
GH S++ +E PR +L + + CG H+ + G LY+ G + GQLGLG
Sbjct: 273 GHKSVK---EEFSPRLNASLRKCGAQKIRCGDDHTLVILRSGQLYSMGANTHGQLGLGDA 329
Query: 321 T 321
T
Sbjct: 330 T 330
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 151/366 (41%), Gaps = 57/366 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++VWG + GQ G +G + R P + L + + I+ + +A V G+
Sbjct: 1612 VFVWGEDTCGQLGIRGLQAA-RSPSLMQSLL-------ATSIVHISANSDMSAFVTDSGS 1663
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+ G +E G+LG G P +++ L + + ++CG + A+ E +
Sbjct: 1664 LYVSGGSEHGRLGLGHMAPAPTPVEIRSLNTVKIMKVACGTYHCLALTEEK--------- 1714
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTI-------------ICQVSCGSVHVVALSECGLLQ 189
R++ WG + N G N + I V G H ALS+ G L
Sbjct: 1715 RVYAWGDGKWGNA-----GVSNTNDVLEPQELSSLAACSIIGVHAGGFHSAALSQYGDLF 1769
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE--NG 247
WG N GQLG G T P I LD + VS G HSA + + +
Sbjct: 1770 MWGKNSNGQLGLGTTSAAEDSPTKISN----LDGV-----VMDVSLGANHSAVLMQVTSP 1820
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
++T GL + GQLG D+ L V ALD I +CG H+ A++ G L W
Sbjct: 1821 NLFTCGLNANGQLGLGDFV--DRSTLTA-VDALDDRQIVSASCGAAHTAAVSQYGDLITW 1877
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G + GQLGL P + +P + V++V CG T+V G ++
Sbjct: 1878 GNGRNGQLGLKAGLSKDIENPVQ-------LPAICNDPMVKVV-CGQEVTIVVSEKGELY 1929
Query: 368 GWGYNS 373
GY S
Sbjct: 1930 MAGYES 1935
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 172/416 (41%), Gaps = 96/416 (23%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPP----ELFGCPAGANSRWLDIACGHEHTAAVA 78
++ WG + GQ G + I +L P E P S IACG+ +AA++
Sbjct: 1451 VWSWGGSPFGQLGHE------TITDKLAPTPLLERHKIPPDVKS----IACGYTFSAAMS 1500
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPR---- 133
+ G +FTWG E G+LG + P +K SE V+ I+CG H + +PR
Sbjct: 1501 AKGEVFTWGNGESGELGHAPKVLTYAPSLIKDF-SEVVQ-IACGFKHMAGIVFKPRMKTI 1558
Query: 134 ---------ENDGTISTSR----------------------------------LWVWGQN 150
+N T S S ++VWG++
Sbjct: 1559 ELTGSSNIGDNSTTFSGSIAAGSVSGSTRSHTTGHHTTRTSAFSASNQKRHGCVFVWGED 1618
Query: 151 Q-GSNFPRLFWGAFTPNTIICQVSCGSVHVVA-------LSECGLLQAWGYNEYGQLGRG 202
G R A +P+ + ++ VH+ A +++ G L G +E+G+LG G
Sbjct: 1619 TCGQLGIRGLQAARSPSLMQSLLATSIVHISANSDMSAFVTDSGSLYVSGGSEHGRLGLG 1678
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
P I+ KI +V+CG YH A++E VY WG G G G
Sbjct: 1679 HMAPA-PTPVEIRSLNTV--------KIMKVACGTYHCLALTEEKRVYAWGDGKWGNAG- 1728
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
+ + + L P+ + +L I V GG HS AL+ G L+ WG + GQLGLG +
Sbjct: 1729 --VSNTNDVLEPQELSSLAACSIIGVHAGGFHSAALSQYGDLFMWGKNSNGQLGLGTTSA 1786
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR--DGRIHGWGYNSYGQ 376
+ +S T N+ +V+ V+ G +H+ V M+ + G N+ GQ
Sbjct: 1787 A-----EDSPTKISNLDGVVMD-----VSLGANHSAVLMQVTSPNLFTCGLNANGQ 1832
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 138/309 (44%), Gaps = 47/309 (15%)
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG + GQLG + + P ++ L + + IS + +A + +
Sbjct: 1610 GCVFVWGEDTCGQLGIRGLQAARSPSLMQSLLATSIVHISANSDMSAFVTD--------- 1660
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFTP----------NTI-ICQVSCGSVHVVALSECGLLQ 189
+ L+V G GS RL G P NT+ I +V+CG+ H +AL+E +
Sbjct: 1661 SGSLYVSG---GSEHGRLGLGHMAPAPTPVEIRSLNTVKIMKVACGTYHCLALTEEKRVY 1717
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
AWG ++G G T + L+ P+ + A I V G +HSAA+S+ G++
Sbjct: 1718 AWGDGKWGNAGVSNTNDVLE-PQELSSLAAC--------SIIGVHAGGFHSAALSQYGDL 1768
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL--TSKGALYAW 307
+ WG S GQLG + + + P ++ LDG+ + DV+ G HS L + L+
Sbjct: 1769 FMWGKNSNGQLGLGTTSAAEDS--PTKISNLDGV-VMDVSLGANHSAVLMQVTSPNLFTC 1825
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G + GQLGLG +L ++ + + +CG +HT + G +
Sbjct: 1826 GLNANGQLGLGDFVDRSTLTAVDA----------LDDRQIVSASCGAAHTAAVSQYGDLI 1875
Query: 368 GWGYNSYGQ 376
WG GQ
Sbjct: 1876 TWGNGRNGQ 1884
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 124/302 (41%), Gaps = 55/302 (18%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
IA G+ H+ A+ G +F+WG+ +G+LG G++ + P V LQ+ V I+CGAH T
Sbjct: 193 IAAGYYHSLALNDTGKIFSWGSGSWGKLGIGSDANAESPRFVASLQNSKVVHIACGAHHT 252
Query: 127 AAIAEPRENDGTISTSRLWVWGQN-QGSNFPRLFWGAFTPNTIIC-------QVSCGSVH 178
AAI + +W WG+ +G + F+P ++ CG H
Sbjct: 253 AAIT---------TVGDVWTWGKGLRGQLGHKSVKEEFSPRLNASLRKCGAQKIRCGDDH 303
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
+ + G L + G N +GQLG G + + P ++ G+A EK+ +
Sbjct: 304 TLVILRSGQLYSMGANTHGQLGLGDATDRII-PTLVTGFAN--------EKVIDIDAKGC 354
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL-DGIFIKDVACGGVHSCA 297
S A++ G+V+ +G + L +PR V L I VA A
Sbjct: 355 RSIALTNTGKVFAFGNETEPHLNR----------IPRFVAGLPKSDLIIAVARTAHFDFA 404
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT 357
++ G L+ W R FS S R + GV + CGH+H
Sbjct: 405 ISDTGQLFRW--------------RPFSSEEESS----RMLESFHAIKGVVRMFCGHNHM 446
Query: 358 LV 359
V
Sbjct: 447 AV 448
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 110/452 (24%), Positives = 171/452 (37%), Gaps = 88/452 (19%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG GQ G K + + +L L C A I CG +HT + G
Sbjct: 261 VWTWGKGLRGQLGHKSVKEEF--SPRLNASLRKCGAQ------KIRCGDDHTLVILRSGQ 312
Query: 83 LFTWGANEFGQLGDGTEEGRKHP--------EKVKQLQSEFVKSISC------------- 121
L++ GAN GQLG G R P EKV + ++ +SI+
Sbjct: 313 LYSMGANTHGQLGLGDATDRIIPTLVTGFANEKVIDIDAKGCRSIALTNTGKVFAFGNET 372
Query: 122 ---------------GAHCTAAIAEPRENDGTIS-TSRLWVWGQNQGSNFPRLFWGAFTP 165
+ A+A D IS T +L+ W +F
Sbjct: 373 EPHLNRIPRFVAGLPKSDLIIAVARTAHFDFAISDTGQLFRWRPFSSEEESSRMLESFHA 432
Query: 166 NTIICQVSCGSVH--VVALSECGLLQAW-GYNEYGQLGRGITCEGLQGPRVIKGYAKFLD 222
+ ++ CG H V+ E G QA N+ I+ L+ K
Sbjct: 433 IKGVVRMFCGHNHMAVICSPEMGCTQAMISRNKSTSFSSDISRASLEKFPSEKILPALGT 492
Query: 223 EAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVAL 280
L++ V + S + +G +YT+G G G+LGH + +E + P+R+ L
Sbjct: 493 NTEYLDEFATVQVRD--SPSREGDGYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETL 550
Query: 281 DGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI 340
+ + +ACG + ALT G +Y WG S G+LGLG P+
Sbjct: 551 AKMSVVFIACGKDSTAALTDTGKVYTWGKSAQGKLGLGSGK-----------------PL 593
Query: 341 -LVVPNGVQLVACGHSHTLVYMRDGRIHG-----------WGYNSYGQAANEKSTYAWYP 388
+VVP QLV SH + + GR H WG N++GQ + ++ P
Sbjct: 594 AIVVP---QLVQDLSSHVVCQISLGRNHAACSTDMHKFFVWGSNTFGQLGIPHIS-SYMP 649
Query: 389 SPVDWCV---GEVRKLAAGGGHSAVLADACSL 417
P + +R +A GG H+ + + S+
Sbjct: 650 DPYEITSLREANIRSIACGGWHTLISTNTGSV 681
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 146/358 (40%), Gaps = 41/358 (11%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS--EFVKSISCGAH 124
+A G +H+ A++ G +++WG + FGQLG T + P + + VKSI+CG
Sbjct: 1435 VAAGDQHSLALSVFGEVWSWGGSPFGQLGHETITDKLAPTPLLERHKIPPDVKSIACGYT 1494
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSNF---PRLFWGAFTPNTI-----ICQVSCGS 176
+AA++ E ++ WG + P++ + P+ I + Q++CG
Sbjct: 1495 FSAAMSAKGE---------VFTWGNGESGELGHAPKVL--TYAPSLIKDFSEVVQIACGF 1543
Query: 177 VHVVALSECGLLQAWGYNEYGQLG-RGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
H+ + ++ +G T G + G
Sbjct: 1544 KHMAGIVFKPRMKTIELTGSSNIGDNSTTFSGSIAAGSVSG-----STRSHTTGHHTTRT 1598
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
+ ++ +G V+ WG + GQLG LQ+ L + ++A I ++ S
Sbjct: 1599 SAFSASNQKRHGCVFVWGEDTCGQLGIRGLQAARSPSLMQSLLATS---IVHISANSDMS 1655
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS 355
+T G+LY GGS+ G+LGLG + P + R++ + + VACG
Sbjct: 1656 AFVTDSGSLYVSGGSEHGRLGLG------HMAPAPTPVEIRSLNTV----KIMKVACGTY 1705
Query: 356 HTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLA 412
H L + R++ WG +G A + P + + + AGG HSA L+
Sbjct: 1706 HCLALTEEKRVYAWGDGKWGNAGVSNTNDVLEPQELSSLAACSIIGVHAGGFHSAALS 1763
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 127/291 (43%), Gaps = 26/291 (8%)
Query: 133 RENDGTISTSRLWVWGQ-NQGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSE 184
RE DG I T V+G+ G + R P I + ++CG AL++
Sbjct: 511 REGDGYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTD 570
Query: 185 CGLLQAWGYNEYGQLGRGI-TCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
G + WG + G+LG G + P++++ + + + Q+S G H+A
Sbjct: 571 TGKVYTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSSHV--------VCQISLGRNHAACS 622
Query: 244 SENGEVYTWGLGSVGQLG--HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
++ + + WG + GQLG H S D P + +L I+ +ACGG H+ T+
Sbjct: 623 TDMHKFFVWGSNTFGQLGIPHISSYMPD----PYEITSLREANIRSIACGGWHTLISTNT 678
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
G++ + G GQLG G +L +++ YF+ I + + V+ G +
Sbjct: 679 GSVMSCGKGWHGQLGHGDYESLTAL--SKTLPYFKKIVEGFGDSFIVKVSAGKESSAAIT 736
Query: 362 RDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
GR+ WG Q +E S YP V++ ++R + G S +LA
Sbjct: 737 NKGRLFTWGKGDEYQLGHESSKNEAYPREVEF-FAKIRVVDVSIGDSHMLA 786
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 93/236 (39%), Gaps = 39/236 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLP-PELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+VWG N GQ G I +P P AN R IACG HT + G
Sbjct: 628 FFVWGSNTFGQLGIP------HISSYMPDPYEITSLREANIR--SIACGGWHTLISTNTG 679
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEK--------VKQLQSEFVKSISCGAHCTAAIAEPR 133
++ + G GQLG G E K V+ F+ +S G +AAI
Sbjct: 680 SVMSCGKGWHGQLGHGDYESLTALSKTLPYFKKIVEGFGDSFIVKVSAGKESSAAIT--- 736
Query: 134 ENDGTISTSRLWVWGQ----------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALS 183
N G RL+ WG+ ++ +PR F + VS G H++AL
Sbjct: 737 -NKG-----RLFTWGKGDEYQLGHESSKNEAYPREV--EFFAKIRVVDVSIGDSHMLALD 788
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
GL +WG GQLG G CE PR I + L + E E+ + G ++
Sbjct: 789 YSGLPYSWGNGSAGQLGHGEMCERETLPRPIMLCRRGLRDGIE-ERFFDIQWGSFY 843
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 78/167 (46%), Gaps = 7/167 (4%)
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
V+ WG G G+LG+ QS + + +P V A + +K A G H+ L++ G + + G
Sbjct: 92 VFMWGDGENGKLGN---QSEEIQHVPYIVPAFRNVLVKVCALGKQHTLFLSADGVVLSCG 148
Query: 309 GSQAGQLGLGPQTRSFSLI---PNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
+ GQLG+G S S P++ + + I+ N + +A G+ H+L G+
Sbjct: 149 SNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALNDTGK 208
Query: 366 IHGWGYNSYGQAANEKSTYAWYPSPV-DWCVGEVRKLAAGGGHSAVL 411
I WG S+G+ A P V +V +A G H+A +
Sbjct: 209 IFSWGSGSWGKLGIGSDANAESPRFVASLQNSKVVHIACGAHHTAAI 255
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 80/200 (40%), Gaps = 32/200 (16%)
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
NS+ + IACG HTAA+ + G ++TWG GQLG + + P L+ + I
Sbjct: 239 NSKVVHIACGAHHTAAITTVGDVWTWGKGLRGQLGHKSVKEEFSPRLNASLRKCGAQKIR 298
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQNQ------GSNFPRLFWGAFT--PNTIICQV 172
CG T I + + +L+ G N G R+ T N + +
Sbjct: 299 CGDDHTLVI---------LRSGQLYSMGANTHGQLGLGDATDRIIPTLVTGFANEKVIDI 349
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
+AL+ G + A+G L R PR + G P+ + I
Sbjct: 350 DAKGCRSIALTNTGKVFAFGNETEPHLNR--------IPRFVAGL-------PKSDLIIA 394
Query: 233 VSCGEYHSAAVSENGEVYTW 252
V+ + A+S+ G+++ W
Sbjct: 395 VARTAHFDFAISDTGQLFRW 414
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 68 ACGHEHTAAVASDGTLFTWGANEFGQLG--DGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
+CG HTAAV+ G L TWG GQLG G + ++P ++ + ++ + + CG
Sbjct: 1859 SCGAAHTAAVSQYGDLITWGNGRNGQLGLKAGLSKDIENPVQLPAICNDPMVKVVCGQEV 1918
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQ---VSCGSVHVVAL 182
T ++E E S + + G S+ R F +F + Q ++ GSVHV+AL
Sbjct: 1919 TIVVSEKGELYMAGYESTIGLGGN---SSRRREFDVSFREVEGLIQPTQIAVGSVHVLAL 1975
>gi|403263569|ref|XP_003924096.1| PREDICTED: uncharacterized protein LOC101049856 [Saimiri
boliviensis boliviensis]
Length = 1170
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 158/347 (45%), Gaps = 63/347 (18%)
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
N + ++CG EH+A V + L+ +G+N +GQLG G++ P VK L+ E VK +
Sbjct: 34 NDVAVHLSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAA 93
Query: 121 CGAHCTAAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVH 178
CG + T E G +L + + + F + + FTP I Q+S GS
Sbjct: 94 CGRNHTLVSTEGGNVYATGGNDEGQLGLGDTEERTTFHLISF--FTPQHKIKQLSAGSNT 151
Query: 179 VVALSECGLLQAWGYNEYGQLGRG-----------------------------ITCEG-- 207
AL+E G L WG N GQ+G +T +G
Sbjct: 152 SAALTEDGRLFMWGDNSEGQIGLPDMPNACVPHQVTTGKPVSWISCGYYHSAFVTTDGEL 211
Query: 208 ----------LQGPRVIKGYAKFLDEAPEL-EKITQVSCGEYHSAAVSENGEVYTWGLGS 256
L P + + PE+ EK+ QV+CG HS ++EN ++YT+GLG
Sbjct: 212 YIFGEPENGKLGLPYELLSNHRIPQLVPEIPEKVIQVACGGEHSVVLTEN-DLYTFGLGK 270
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
GQLG + E PR V ++ G I ++CG H+ LT G +Y +G + G+LG
Sbjct: 271 FGQLGLGTFLFETSE--PRVVESIKGRKISYISCGENHAALLTDTGLMYTFGDGRHGKLG 328
Query: 317 LGPQTRSFSLIPNESDTYFRNIPIL---VVPNGVQLVACGHSHTLVY 360
L + N ++ + IPIL ++ V+LVACG H +V+
Sbjct: 329 LE--------LENFTNQF---IPILCSYLLKYKVKLVACGGCHMVVF 364
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 121/284 (42%), Gaps = 51/284 (17%)
Query: 144 LWVWGQNQGS-NFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
++V+G+++ + N P FW N + +SCG H ++ L +G N +GQLG G
Sbjct: 14 VFVFGKSKFTENTPGKFWFK---NDVAVHLSCGDEHSAVVTGNNKLYVFGSNNWGQLGLG 70
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
+ + P +K A + EK+ +CG H+ +E G VY G GQLG
Sbjct: 71 -SKSAVSKPTCVK--------ALKPEKVKLAACGRNHTLVSTEGGNVYATGGNDEGQLG- 120
Query: 263 CSLQSGDKELLPRRVVALDGIF-----IKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GD E R L F IK ++ G S ALT G L+ WG + GQ+GL
Sbjct: 121 ----LGDTE--ERTTFHLISFFTPQHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGL 174
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQL------VACGHSHTLVYMRDGRIHGWGY 371
++P VP+ V ++CG+ H+ DG ++ +G
Sbjct: 175 P------------------DMPNACVPHQVTTGKPVSWISCGYYHSAFVTTDGELYIFGE 216
Query: 372 NSYGQAA--NEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLAD 413
G+ E + P V +V ++A GG HS VL +
Sbjct: 217 PENGKLGLPYELLSNHRIPQLVPEIPEKVIQVACGGEHSVVLTE 260
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 38/192 (19%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+++WG N GQ G +P Q+ G W I+CG+ H+A V +DG
Sbjct: 161 LFMWGDNSEGQIGLPDMPNAC-VPHQV-------TTGKPVSW--ISCGYYHSAFVTTDGE 210
Query: 83 LFTWGANEFGQLGDGTEEGRKH--PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
L+ +G E G+LG E H P+ V ++ + ++ ++CG + + END
Sbjct: 211 LYIFGEPENGKLGLPYELLSNHRIPQLVPEIPEKVIQ-VACGGEHSVVLT---END---- 262
Query: 141 TSRLWVWGQNQGSNFPRLFWGAF-----TPNTI-------ICQVSCGSVHVVALSECGLL 188
L+ +G + F +L G F P + I +SCG H L++ GL+
Sbjct: 263 ---LYTFGLGK---FGQLGLGTFLFETSEPRVVESIKGRKISYISCGENHAALLTDTGLM 316
Query: 189 QAWGYNEYGQLG 200
+G +G+LG
Sbjct: 317 YTFGDGRHGKLG 328
>gi|354487926|ref|XP_003506122.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Cricetulus
griseus]
gi|344253822|gb|EGW09926.1| RCC1 and BTB domain-containing protein 2 [Cricetulus griseus]
Length = 551
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 116/233 (49%), Gaps = 24/233 (10%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H+V + G + WG+N Y QLG G T GL + + +++ +V+CG
Sbjct: 110 HIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN--------KQVIEVACGS 161
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHSC 296
YHS ++ +GEV+ WG + GQ+G S + + +PRRV L + ++ACG + S
Sbjct: 162 YHSLVLTSDGEVFAWGYNNSGQVGSGSTAN---QPIPRRVTGCLQNKVVMNIACGQMCSM 218
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G +Y WG + GQLGLG + + R VQ VACG++H
Sbjct: 219 AVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR----------VQRVACGYAH 268
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
TLV +G+++ WG NSYGQ + YP+PV V + R + HSA
Sbjct: 269 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPV--VVEKDRIIEIAACHSA 319
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 136/301 (45%), Gaps = 39/301 (12%)
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
D +F G N G LG G + P ++ L + + S+S G+ +A DG +
Sbjct: 64 DDEIFVLGTNCSGCLGIGDIQSTIEPRRLNSLTGKKIASLSYGSGPHIVLAT---TDGEV 120
Query: 140 STSRLWVWGQNQGSNFPR---------LFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
T WG N S N + +V+CGS H + L+ G + A
Sbjct: 121 FT-----WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFA 175
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WGYN GQ+G G T PR + G + + + ++CG+ S AV + GEVY
Sbjct: 176 WGYNNSGQVGSGSTANQ-PIPRRVTG-------CLQNKVVMNIACGQMCSMAVVDTGEVY 227
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
WG GQLG L S + P RV AL GI ++ VACG H+ LT +G +YAWG +
Sbjct: 228 VWGYNGNGQLG---LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGAN 284
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRIHGW 369
GQLG G N+S+ + ++ +++ AC +HT + G ++ W
Sbjct: 285 SYGQLGTG----------NKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMW 334
Query: 370 G 370
G
Sbjct: 335 G 335
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 115/243 (47%), Gaps = 39/243 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G +P + L +N + +++ACG H+ + SDG
Sbjct: 120 VFTWGHNAYSQLG-NGTTNHGLVPCHISTNL------SNKQVIEVACGSYHSLVLTSDGE 172
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P +V LQ++ V +I+CG C+ A+ + T
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAV---------VDT 223
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N N P A + +V+CG H + L++ G + AWG
Sbjct: 224 GEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 283
Query: 194 NEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G + + P V+ E ++I ++ +C H SAA ++ G VY
Sbjct: 284 NSYGQLGTGNKSNQSYPTPVVV-----------EKDRIIEIAACHSAHTSAAKTQGGHVY 332
Query: 251 TWG 253
WG
Sbjct: 333 MWG 335
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 137/333 (41%), Gaps = 46/333 (13%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G V I+V G N SG G I + P G L
Sbjct: 50 VFGSAGNEVLYTTVDDEIFVLGTNCSGCLGIGD------IQSTIEPRRLNSLTGKKIASL 103
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAH 124
G H +DG +FTWG N + QLG+GT P + L ++ V ++CG++
Sbjct: 104 SYGSG-PHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSY 162
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSN----------FPRLFWGAFTPNTIICQVSC 174
+ + +DG + + WG N PR G N ++ ++C
Sbjct: 163 HSLVLT----SDGEV-----FAWGYNNSGQVGSGSTANQPIPRRVTGCLQ-NKVVMNIAC 212
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G + +A+ + G + WGYN GQLG G + RV A + ++ +V+
Sbjct: 213 GQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRV---------AALQGIRVQRVA 263
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG 292
CG H+ +++ G+VY WG S GQLG +G+K + P VV I+ AC
Sbjct: 264 CGYAHTLVLTDEGQVYAWGANSYGQLG-----TGNKSNQSYPTPVVVEKDRIIEIAACHS 318
Query: 293 VH-SCALTSKGALYAWGGSQAGQLGLGPQTRSF 324
H S A T G +Y WG + GQ + P F
Sbjct: 319 AHTSAAKTQGGHVYMWGQCR-GQSVVLPHLTHF 350
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 67/151 (44%), Gaps = 20/151 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G Q P A R +ACG+ HT + +G
Sbjct: 226 VYVWGYNGNGQLGLGSSGNQ--------PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 277
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
++ WGAN +GQLG G + + +P V + ++ +C AH +AA +
Sbjct: 278 VYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQ---------G 328
Query: 142 SRLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L T + C
Sbjct: 329 GHVYMWGQCRGQSVVLPHLTHFCCTDDVFAC 359
>gi|39996353|ref|NP_952304.1| lipoprotein [Geobacter sulfurreducens PCA]
gi|39983233|gb|AAR34627.1| ATS1 domain repeat protein [Geobacter sulfurreducens PCA]
Length = 2082
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 143/341 (41%), Gaps = 60/341 (17%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A ++ WG N SGQ G G P+Q+ PA A + W +A G H+ +
Sbjct: 466 ADGTLWAWGDNSSGQLG-IGSTVAASTPQQI---TVTNPASAGNDWTAVAGGGAHSLGLK 521
Query: 79 SDGTLFTWGANEFGQLGDGT-EEGRKHPEKV-----KQLQSEFVKSISCGAHCTAAIAEP 132
+DGTL++WG N FGQLGDGT R P ++ +V + G A
Sbjct: 522 ADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFSLA----- 576
Query: 133 RENDGTISTSRLWVWGQNQ----GS-----------NFPRLFWGAFTPNTII----CQVS 173
+ DGTI W WG N G+ N P A P+T ++
Sbjct: 577 LQADGTI-----WTWGDNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSSWVAIA 631
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
G H ++L G L AWG N GQLG G+T +VI E +
Sbjct: 632 AGQDHGLSLQADGTLWAWGANSVGQLGNGVTTATFTPVQVINA---------EGVPYVSL 682
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL-------PRRVVALDGIFIK 286
+ G HS A +G ++ WG + GQLG GD + L P R++ + +
Sbjct: 683 AAGTSHSLAGRSDGTLWAWGNNTSGQLG-TGPHPGDADPLNPQPHTVPARILTSNPVSAA 741
Query: 287 D----VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRS 323
D GG HS AL S G L+ WG + +GQLG G T +
Sbjct: 742 DDWLVATAGGSHSAALKSNGTLWTWGQNTSGQLGNGTTTEA 782
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 172/417 (41%), Gaps = 60/417 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I A +++ WG N GQ G+ QL K P + G + W+ ++ G +
Sbjct: 95 IKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRI-----GTGNDWVAVSAGELTSFG 149
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKV---KQLQSEFVKSISCGAHCTAAIAEPR 133
+ DGTL++WG N FG+LGDGT R P +V +V + G H A
Sbjct: 150 LKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALA-----L 204
Query: 134 ENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQV---------SCGSVHVVALSE 184
+ DGT LW WG N PN ++ S G +H VAL
Sbjct: 205 QADGT-----LWAWGANLTGQLGTGG-TGILPNPTPLKIGTDRDWTAISAGEMHSVALKA 258
Query: 185 CGLLQAWGYNEYGQLGRGITCEG--LQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
G L +WG N +G+LG G+ G + P + + ++ ++ G H+ A
Sbjct: 259 DGSLWSWGQNLFGELGNGVALPGANVTTPTRVGTGSDWV----------AIAAGALHTVA 308
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
+ NG V WG + G +G ++ + L V L + +A G S ++ + G
Sbjct: 309 LHRNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTL--VNNVAIAAGTGVSFSVLANG 366
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL---VACGHSHTLV 359
++ WGG+ AGQLG G T+ V+ G V G + +L
Sbjct: 367 TVFGWGGNGAGQLGNG--------------TFGAVTAPTVLSAGASAWLGVEPGGAFSLG 412
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLADAC 415
+G + WG N+ GQ + +T + P PV G R A G HS AV AD
Sbjct: 413 LRSNGTLWAWGGNASGQLGDGTTTPSAIPVPVVGGAGNWRTTATGTAHSVAVRADGT 469
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 164/398 (41%), Gaps = 61/398 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N SGQ G G IP + G W A G H+ AV +DGT
Sbjct: 419 LWAWGGNASGQLG-DGTTTPSAIPVPV--------VGGAGNWRTTATGTAHSVAVRADGT 469
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+ WG N GQLG G+ P+++ S G TA + G +
Sbjct: 470 LWAWGDNSSGQLGIGSTVAASTPQQIT-----VTNPASAGNDWTAVAGGGAHSLGLKADG 524
Query: 143 RLWVWGQNQGSNFPRLFWGA-----FTPNTII-----------CQVSCGSVHVVALSECG 186
LW WG N F +L G TP I+ V+ G V +AL G
Sbjct: 525 TLWSWGDNT---FGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFSLALQADG 581
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGY-AKFLDEAPELEKITQ----VSCGEYHSA 241
+ WG N QLG T + P + A+ +P ++ G+ H
Sbjct: 582 TIWTWGDNSLLQLG---TDPAMLTPATQRNVPAQLAVASPPSTAFNSSWVAIAAGQDHGL 638
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
++ +G ++ WG SVGQLG+ + P +V+ +G+ +A G HS A S
Sbjct: 639 SLQADGTLWAWGANSVGQLGNGVTTA---TFTPVQVINAEGVPYVSLAAGTSHSLAGRSD 695
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYF---RNIPI-LVVPNGVQ-----LVA- 351
G L+AWG + +GQLG GP P ++D +P ++ N V LVA
Sbjct: 696 GTLWAWGNNTSGQLGTGPH-------PGDADPLNPQPHTVPARILTSNPVSAADDWLVAT 748
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPS 389
G SH+ +G + WG N+ GQ N +T A P+
Sbjct: 749 AGGSHSAALKSNGTLWTWGQNTSGQLGNGTTTEADIPT 786
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 160/388 (41%), Gaps = 73/388 (18%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A ++ WG N +GQ G G + P L AGA S WL + G + +
Sbjct: 364 ANGTVFGWGGNGAGQLG-NGTFGAVTAPTVLS-------AGA-SAWLGVEPGGAFSLGLR 414
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
S+GTL+ WG N GQLGDGT P V + + + AH A A DGT
Sbjct: 415 SNGTLWAWGGNASGQLGDGTTTPSAIPVPVVGGAGNWRTTATGTAHSVAVRA-----DGT 469
Query: 139 ISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTIICQ-----------VSCGSVHVVA 181
LW WG N GS A TP I V+ G H +
Sbjct: 470 -----LWAWGDNSSGQLGIGSTV-----AASTPQQITVTNPASAGNDWTAVAGGGAHSLG 519
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGP-RVIKGYAKFLDEAPELEKITQVSCGEYHS 240
L G L +WG N +GQLG G P +++ G D V+ G S
Sbjct: 520 LKADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFD-----RNWVAVAAGGVFS 574
Query: 241 AAVSENGEVYTWGLGSVGQLGH--CSLQSGDKELLPRRV-------VALDGIFIKDVACG 291
A+ +G ++TWG S+ QLG L + +P ++ A + ++ +A G
Sbjct: 575 LALQADGTIWTWGDNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSSWVA-IAAG 633
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV-PNGVQLV 350
H +L + G L+AWG + GQLG G T +F+ P+ V+ GV V
Sbjct: 634 QDHGLSLQADGTLWAWGANSVGQLGNGVTTATFT-------------PVQVINAEGVPYV 680
Query: 351 --ACGHSHTLVYMRDGRIHGWGYNSYGQ 376
A G SH+L DG + WG N+ GQ
Sbjct: 681 SLAAGTSHSLAGRSDGTLWAWGNNTSGQ 708
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 165/410 (40%), Gaps = 59/410 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+ WG N G G + + P L P + + IA G + +V ++GT
Sbjct: 315 VSAWGNNAQGAVGDG------TVANRSTPTLIVAPVTLVNN-VAIAAGTGVSFSVLANGT 367
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F WG N GQLG+GT P + S ++ GA G S
Sbjct: 368 VFGWGGNGAGQLGNGTFGAVTAPTVLSAGASAWLGVEPGGAFSL----------GLRSNG 417
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQV----------SCGSVHVVALSECGLLQAWG 192
LW WG N +L G TP+ I V + G+ H VA+ G L AWG
Sbjct: 418 TLWAWGGNASG---QLGDGTTTPSAIPVPVVGGAGNWRTTATGTAHSVAVRADGTLWAWG 474
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
N GQLG G T P+ I + A T V+ G HS + +G +++W
Sbjct: 475 DNSSGQLGIGSTVAA-STPQQI----TVTNPASAGNDWTAVAGGGAHSLGLKADGTLWSW 529
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALD-GIFIKD---VACGGVHSCALTSKGALYAWG 308
G + GQLG + S P ++V + G F ++ VA GGV S AL + G ++ WG
Sbjct: 530 GDNTFGQLGDGTGTS--NRTTPVQIVTGNPGNFDRNWVAVAAGGVFSLALQADGTIWTWG 587
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIP---ILVVPNGVQL------VACGHSHTLV 359
+ QLG P L P RN+P + P +A G H L
Sbjct: 588 DNSLLQLGTDPAM----LTPATQ----RNVPAQLAVASPPSTAFNSSWVAIAAGQDHGLS 639
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
DG + WG NS GQ N +T + P V G LAAG HS
Sbjct: 640 LQADGTLWAWGANSVGQLGNGVTTATFTPVQVINAEGVPYVSLAAGTSHS 689
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 151/382 (39%), Gaps = 82/382 (21%)
Query: 55 GCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSE 114
G PA S +A G H + SDGTL+ G+N+FGQLGDGT R P +V
Sbjct: 25 GAPAAGWSAVPHVAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRTSPVQVPGTW-- 82
Query: 115 FVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTI 168
K+++ G + I + DG+ LW WG N Q +L F+P I
Sbjct: 83 --KTVAAGTTHSLGI----KADGS-----LWAWGSNLFGQLGQPLVNGQLATNKFSPIRI 131
Query: 169 -----ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIK---GYAKF 220
VS G + L G L +WG N +G+LG G T Q +V+ ++
Sbjct: 132 GTGNDWVAVSAGELTSFGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRY 191
Query: 221 LDEA------------------------------------PELEKI------TQVSCGEY 238
+ A P KI T +S GE
Sbjct: 192 VAVAAGGEHALALQADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAISAGEM 251
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGIFIKDVACGGVHSCA 297
HS A+ +G +++WG G+LG+ G P RV D + I A G +H+ A
Sbjct: 252 HSVALKADGSLWSWGQNLFGELGNGVALPGANVTTPTRVGTGSDWVAI---AAGALHTVA 308
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT 357
L G + AWG + G +G G + N S P+ +V N +A G +
Sbjct: 309 LHRNGTVSAWGNNAQGAVGDG-------TVANRSTPTLIVAPVTLVNN--VAIAAGTGVS 359
Query: 358 LVYMRDGRIHGWGYNSYGQAAN 379
+ +G + GWG N GQ N
Sbjct: 360 FSVLANGTVFGWGGNGAGQLGN 381
>gi|345325115|ref|XP_001514077.2| PREDICTED: RCC1 and BTB domain-containing protein 2
[Ornithorhynchus anatinus]
Length = 721
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 144/315 (45%), Gaps = 48/315 (15%)
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTA 127
G+E A +D +F G N G LG G + P ++ L + + +S G+ H
Sbjct: 225 GNEVLYATEND-EVFVLGTNCSGCLGTGDVQNTIEPRRIDSLCGKKITCLSYGSGPHVVV 283
Query: 128 AIAEPRENDGTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTI---ICQVSCGSVH 178
A AE ++ WG N G+ L + N + + +V+CGS H
Sbjct: 284 ATAE----------GEVYTWGHNAYSQLGNGTTNHGLIPCHVSTNLVNKKVVEVACGSHH 333
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
+ L+ G + AWGYN GQ+G G T RV + T ++CG+
Sbjct: 334 SLVLTSDGEVYAWGYNNSGQVGSGSTANQPIPRRVTSCLQNKI--------ATNIACGQM 385
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
S AV E+GEVY WG GQLG L S + P R+ AL GI ++ V CG H+ L
Sbjct: 386 CSMAVVESGEVYVWGYNGNGQLG---LGSSGNQPTPCRIAALQGIRVQRVTCGYAHTLVL 442
Query: 299 TSKGALYAWGGSQAGQLGLGPQT-RSFSL-IPNESDTYFRNIPILVVPNGVQLVACGHSH 356
T +G LYAWG + GQLG G ++ +S+ + +P E D +++ AC +H
Sbjct: 443 TDEGQLYAWGANSYGQLGTGNKSNQSYPIPVPVEKDRI------------IEIAACHSAH 490
Query: 357 T-LVYMRDGRIHGWG 370
T + G ++ WG
Sbjct: 491 TSAAKTQSGHVYMWG 505
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 112/233 (48%), Gaps = 24/233 (10%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HVV + G + WG+N Y QLG G T GL V +K+ +V+CG
Sbjct: 280 HVVVATAEGEVYTWGHNAYSQLGNGTTNHGLIPCHVSTNLVN--------KKVVEVACGS 331
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHSC 296
+HS ++ +GEVY WG + GQ+G S + +PRRV + L ++ACG + S
Sbjct: 332 HHSLVLTSDGEVYAWGYNNSGQVGS---GSTANQPIPRRVTSCLQNKIATNIACGQMCSM 388
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G +Y WG + GQLGLG + + R VQ V CG++H
Sbjct: 389 AVVESGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR----------VQRVTCGYAH 438
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
TLV +G+++ WG NSYGQ + YP PV V + R + HSA
Sbjct: 439 TLVLTDEGQLYAWGANSYGQLGTGNKSNQSYPIPVP--VEKDRIIEIAACHSA 489
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 114/247 (46%), Gaps = 39/247 (15%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A+ +Y WG+N Q G G IP + L N + +++ACG H+ +
Sbjct: 286 AEGEVYTWGHNAYSQLG-NGTTNHGLIPCHVSTNL------VNKKVVEVACGSHHSLVLT 338
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDG 137
SDG ++ WG N GQ+G G+ + P +V LQ++ +I+CG C+ A+ E E
Sbjct: 339 SDGEVYAWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIATNIACGQMCSMAVVESGE--- 395
Query: 138 TISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQ 189
++VWG N N P A + +V+CG H + L++ G L
Sbjct: 396 ------VYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVTCGYAHTLVLTDEGQLY 449
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAP-ELEKITQV-SCGEYH-SAAVSEN 246
AWG N YGQLG G K + P E ++I ++ +C H SAA +++
Sbjct: 450 AWGANSYGQLGTG-----------NKSNQSYPIPVPVEKDRIIEIAACHSAHTSAAKTQS 498
Query: 247 GEVYTWG 253
G VY WG
Sbjct: 499 GHVYMWG 505
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 20/151 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G Q P A R + CG+ HT + +G
Sbjct: 396 VYVWGYNGNGQLGLGSSGNQ--------PTPCRIAALQGIRVQRVTCGYAHTLVLTDEGQ 447
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
L+ WGAN +GQLG G + + +P V + ++ +C AH +AA + +
Sbjct: 448 LYAWGANSYGQLGTGNKSNQSYPIPVPVEKDRIIEIAACHSAHTSAAKTQ---------S 498
Query: 142 SRLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 499 GHVYMWGQCRGQSVTLPHLTHFSCTDDVFAC 529
>gi|322795832|gb|EFZ18511.1| hypothetical protein SINV_14428 [Solenopsis invicta]
Length = 786
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 150/329 (45%), Gaps = 45/329 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G G + PK L +L G +DIACG H+AA+ S G
Sbjct: 35 VYSWGEGDDGKLGH-GNKVSYDRPK-LIEDLLGV------EIVDIACGGHHSAAITSAGW 86
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG G + + P+ V+ LQ V ++CG+ + +++
Sbjct: 87 LYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDN------ 140
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
+W WG R G P I + +V CGS VAL+ G + WG
Sbjct: 141 -VWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKG 199
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G T + ++ PR + A + +KI ++ G H A S+ GEV+TWG
Sbjct: 200 DYHRLGHG-TDDHVRRPRKVA--------ALQGKKIISIATGSLHCVACSDKGEVFTWGD 250
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G I VACG H+ AW ++A Q
Sbjct: 251 NDEGQLGDGTTSALHR---PRLVHALQGKKITRVACGSAHTL---------AWSTAKATQ 298
Query: 315 LGLGPQT-RSFSLIPNESDTYFRNIPILV 342
+ T + L+ + S + RN +L+
Sbjct: 299 SRMPASTPMEYDLVKDLSYSVLRNRLVLL 327
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 143/307 (46%), Gaps = 47/307 (15%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++ G +H A++S+G +++WG + G+LG G + P+ ++ L + I+CG H +
Sbjct: 19 VSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHS 78
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCG 175
AAI S L+ WG+ + + RL G P + + V+CG
Sbjct: 79 AAIT---------SAGWLYTWGKGR---YGRLGHGDSDDQLRPKVVEALQDYKVIDVACG 126
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + +++ + +WG +YG+LGRG +G + P I A + +V
Sbjct: 127 SGDAQTLCVTDDDNVWSWGDGDYGKLGRG-GSDGCKVPLKIDSLAGL--------GVVKV 177
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++ +G VYTWG G +LGH + D PR+V AL G I +A G +
Sbjct: 178 ECGSQFSVALTRSGAVYTWGKGDYHRLGH---GTDDHVRRPRKVAALQGKKIISIATGSL 234
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG 353
H A + KG ++ WG + GQLG G S + + + + VACG
Sbjct: 235 HCVACSDKGEVFTWGDNDEGQLGDG----------TTSALHRPRLVHALQGKKITRVACG 284
Query: 354 HSHTLVY 360
+HTL +
Sbjct: 285 SAHTLAW 291
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 112/245 (45%), Gaps = 25/245 (10%)
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
VS G H +ALS G + +WG + G+LG G +V K +++ +E I
Sbjct: 19 VSSGGKHCIALSSEGHVYSWGEGDDGKLG--------HGNKVSYDRPKLIEDLLGVE-IV 69
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
++CG +HSAA++ G +YTWG G G+LGH D +L P+ V AL + DVACG
Sbjct: 70 DIACGGHHSAAITSAGWLYTWGKGRYGRLGH---GDSDDQLRPKVVEALQDYKVIDVACG 126
Query: 292 G--VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
+ +T +++WG G+LG G +P + D+ + GV
Sbjct: 127 SGDAQTLCVTDDDNVWSWGDGDYGKLGRG--GSDGCKVPLKIDS--------LAGLGVVK 176
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
V CG ++ R G ++ WG Y + + + P V G ++ +A G H
Sbjct: 177 VECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHC 236
Query: 409 AVLAD 413
+D
Sbjct: 237 VACSD 241
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 87/187 (46%), Gaps = 18/187 (9%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
K VS G H A+S G VY+WG G G+LGH + S D+ P+ + L G+ I D+
Sbjct: 15 KKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDR---PKLIEDLLGVEIVDI 71
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN-GV 347
ACGG HS A+TS G LY WG + G+LG G +SD R + + + V
Sbjct: 72 ACGGHHSAAITSAGWLYTWGKGRYGRLGHG-----------DSDDQLRPKVVEALQDYKV 120
Query: 348 QLVAC--GHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAG 404
VAC G + TL D + WG YG+ S P +D G V K+ G
Sbjct: 121 IDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVVKVECG 180
Query: 405 GGHSAVL 411
S L
Sbjct: 181 SQFSVAL 187
>gi|405954062|gb|EKC21598.1| Putative E3 ubiquitin-protein ligase HERC4 [Crassostrea gigas]
Length = 1059
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 165/351 (47%), Gaps = 55/351 (15%)
Query: 83 LFTWGANEFGQLGDGTEEGRK--HPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+F WG + GQL G E P++V +LQ +K ISCG T + + DG
Sbjct: 4 VFGWGRSNDGQLSIGFSEETSILSPKEVSRLQELDIKEISCGEKHTLIVTK----DG--- 56
Query: 141 TSRLWVWGQNQ----GSNFPRLFWGAFTPNTI----------ICQVSCGSVHVVALSECG 186
+L+ G N+ G + PR A + + + + Q + GS + ++ G
Sbjct: 57 --KLYSCGSNEYGELGHSKPR--SRAVSIDVVELVSSLSSMQVIQAAGGSEFSLVITTAG 112
Query: 187 LLQAWGYNEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
+ +WG N+ GQLGRG ++ E + P+++K A + + Q++CG H A+++
Sbjct: 113 EVFSWGRNDKGQLGRGKLSKEEERKPKLMKSLA--------VCTVVQITCGANHCLALTD 164
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G +++WG GQLG S S P+++V L GI I +A GG HS LT A++
Sbjct: 165 DGRLFSWGCNKYGQLGLGSSHSFHDT--PQQIVCLRGIPIAQIASGGNHSFILTWSRAVF 222
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL---VVPNGVQLVACGHSHTLVYMR 362
WG + GQLGL +D Y ++ P L + V ++CG HT+ +
Sbjct: 223 GWGKNSFGQLGL-------------NDEYDKSHPTLCKSLRNQKVMYISCGEDHTVALTK 269
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEV-RKLAAGGGHSAVLA 412
+G + +G +GQ + + P V +G V ++A G H+ +
Sbjct: 270 EGGVFSFGAGGFGQLGHNSTQNEILPKRVMELMGSVISQVACGRRHTVAFS 320
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/322 (31%), Positives = 156/322 (48%), Gaps = 44/322 (13%)
Query: 1 MDINEI-IGETARPVDNIPAKSAIYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPA 58
+DI EI GE + + +Y G N G+ G K R R + I EL +
Sbjct: 37 LDIKEISCGEKHTLI--VTKDGKLYSCGSNEYGELGHSKPRSRAVSIDVV---EL--VSS 89
Query: 59 GANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFV 116
++ + + A G E + + + G +F+WG N+ GQLG G ++E + P+ +K L V
Sbjct: 90 LSSMQVIQAAGGSEFSLVITTAGEVFSWGRNDKGQLGRGKLSKEEERKPKLMKSLAVCTV 149
Query: 117 KSISCGA-HCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAF--TPNTIIC--- 170
I+CGA HC A +DG RL+ WG N+ +F TP I+C
Sbjct: 150 VQITCGANHCLALT-----DDG-----RLFSWGCNKYGQLGLGSSHSFHDTPQQIVCLRG 199
Query: 171 ----QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPE 226
Q++ G H L+ + WG N +GQLG + P + K
Sbjct: 200 IPIAQIASGGNHSFILTWSRAVFGWGKNSFGQLGLNDEYDK-SHPTLCKSLRN------- 251
Query: 227 LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
+K+ +SCGE H+ A+++ G V+++G G GQLGH S Q+ E+LP+RV+ L G I
Sbjct: 252 -QKVMYISCGEDHTVALTKEGGVFSFGAGGFGQLGHNSTQN---EILPKRVMELMGSVIS 307
Query: 287 DVACGGVHSCALT-SKGALYAW 307
VACG H+ A + S G +YA+
Sbjct: 308 QVACGRRHTVAFSPSSGKMYAF 329
>gi|344281814|ref|XP_003412672.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Loxodonta
africana]
Length = 531
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 141/308 (45%), Gaps = 47/308 (15%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V + +F +G N LG G + P+K++ L + +KS+S G +A D
Sbjct: 37 VTDNDEVFVFGMNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYG---SAPHVLLSTED 93
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQV---SCGSVHVVALSECGL 187
G + + WG N G+ + N +I QV +CGS H +AL+ G
Sbjct: 94 GVV-----YAWGHNGYSQLGNGTTNQGVAPIQVCTNLLIKQVVEVACGSHHSMALAADGE 148
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWGYN GQ+G G T PR + ++K+ ++CG+ S AV +NG
Sbjct: 149 VFAWGYNNCGQVGSGSTANQ-PTPRKVTN-------CLHIKKVVGIACGQTSSMAVLDNG 200
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
EVY WG GQLG L + +L P RV AL + + + CG H+ ALT +G LYAW
Sbjct: 201 EVYGWGYNGNGQLG---LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAW 257
Query: 308 GGSQAGQLGLGPQTRSFS----LIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMR 362
G + GQLG G + S L+ E V++ AC +HT +
Sbjct: 258 GANTYGQLGTGNKNNLLSPAHVLVEKE--------------RVVEIAACHSAHTSAAKTQ 303
Query: 363 DGRIHGWG 370
G ++ WG
Sbjct: 304 SGNVYMWG 311
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 115/238 (48%), Gaps = 34/238 (14%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HV+ +E G++ AWG+N Y QLG G T +G+ +V ++++ +V+CG
Sbjct: 86 HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGVAPIQVCTNLL--------IKQVVEVACGS 137
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV---ACGGVH 294
+HS A++ +GEV+ WG + GQ+G S + + PR+V + + IK V ACG
Sbjct: 138 HHSMALAADGEVFAWGYNNCGQVGSGSTAN---QPTPRKVT--NCLHIKKVVGIACGQTS 192
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG---VQLVA 351
S A+ G +Y WG + GQLGLG + P+ V V +
Sbjct: 193 SMAVLDNGEVYGWGYNGNGQLGLGNNGNQLT-------------PVRVAALHSVCVNQIV 239
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
CG++HTL +G ++ WG N+YGQ P+ V V + R + HSA
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHV--LVEKERVVEIAACHSA 295
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 115/452 (25%), Positives = 178/452 (39%), Gaps = 69/452 (15%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG+N Q G G Q P Q+ C + +++ACG H+ A+A+DG
Sbjct: 95 VVYAWGHNGYSQLGN-GTTNQGVAPIQV------CTNLLIKQVVEVACGSHHSMALAADG 147
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+F WG N GQ+G G+ + P KV L + V I+CG + A+ + E G
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKKVVGIACGQTSSMAVLDNGEVYG--- 204
Query: 141 TSRLWVWGQN------QGSNFPRLFWGAFTPNTIIC--QVSCGSVHVVALSECGLLQAWG 192
WG N G+N +L +C Q+ CG H +AL++ GLL AWG
Sbjct: 205 ------WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G L V+ E E++ ++ +C H SAA +++G VY
Sbjct: 259 ANTYGQLGTGNKNNLLSPAHVL----------VEKERVVEIAACHSAHTSAAKTQSGNVY 308
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC-GGVHSCALTSKGALYAWGG 309
W G C G LP + +C V +C T
Sbjct: 309 MW--------GQC---RGQSVTLPH---------LTHFSCTDDVFACFATPAVTWRLLSV 348
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFR-NIPILVVPNGVQLVACGHSHTLVYMRDGRIHG 368
L + + P +D FR + + V V + C H ++ +
Sbjct: 349 EHEDFLTVAESLKQEFDSPETADLKFRIDGKYIHVHKAVLKIRCEHFRSMFHSY------ 402
Query: 369 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL----AAGGGHSAVLADACSLKELCEFR 424
W +S ++ +Y Y + + + + L A G A LK+LC+
Sbjct: 403 WNEDSEEVIEIDQFSYPVYRAFLQYLYTDAVDLPPEDAIGLLDLATSYCENRLKKLCQHI 462
Query: 425 LAESVTLSNASEIEDVASRTGSEALARLCERL 456
+ +T+ NA + A R +E L C +
Sbjct: 463 IKRGITVENAFSLFSAAVRYDAEDLEEFCFKF 494
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 84/176 (47%), Gaps = 19/176 (10%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGV-HSCALT 299
V++N EV+ +G+ LG +GD + L+P+++ AL G IK ++ G H T
Sbjct: 37 VTDNDEVFVFGMNYSNCLG-----TGDNQSTLVPKKLEALCGKKIKSLSYGSAPHVLLST 91
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
G +YAWG + QLG G + + I ++ L++ V+ VACG H++
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGVAPIQVCTN--------LLIKQVVE-VACGSHHSMA 142
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWC--VGEVRKLAAGGGHSAVLAD 413
DG + WGYN+ GQ + + P V C + +V +A G S + D
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKKVVGIACGQTSSMAVLD 198
>gi|242066354|ref|XP_002454466.1| hypothetical protein SORBIDRAFT_04g031600 [Sorghum bicolor]
gi|241934297|gb|EES07442.1| hypothetical protein SORBIDRAFT_04g031600 [Sorghum bicolor]
Length = 1003
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 145/333 (43%), Gaps = 56/333 (16%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
IACG +H A V G +F+WG G+LG T + P+ + L S VK+I+ GA T
Sbjct: 237 IACGEKHAAIVTKQGQVFSWGEENGGRLGHKTSDSVSDPKIIDSLASTPVKTIAFGAKYT 296
Query: 127 AAIAEPRENDGTISTSRLWVWGQ---------NQGSN---FPRLFWGAFTPNTIICQVSC 174
A++ E L+ WG+ NQ FP + + +++C
Sbjct: 297 CAVSVSGE---------LYEWGEGIHSLGFGKNQCQRSPWFPHKLIST-SDGISVLKIAC 346
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G H +S G L +GY +G LG G T + V E+ + V+
Sbjct: 347 GQWHTAIISSLGKLYTYGYGTFGVLGHGDTHSVVHPKEV---------ESLRGSRAKSVA 397
Query: 235 CGEYHSAAVSEN----------GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF 284
CG +H+AA+ E G+++TWG G+LGH + +S +L+P RV +L
Sbjct: 398 CGPWHTAAIVETSGTLKSSAPGGKLFTWGDAGGGKLGHTNKKS---KLVPTRVESLIDCD 454
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLG-PQTRSFSLIPNESDTYFRNIPILVV 343
V+CG + LT G ++ G + GQLG S ++ T F
Sbjct: 455 FTQVSCGMSLTAVLTITGVVFTIGSKEHGQLGNSRSDNTSICMVEGPLKTEF-------- 506
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
V+ ++CG SH V +G++ WG + GQ
Sbjct: 507 ---VKDISCGSSHVAVLTMNGKVFTWGKGTEGQ 536
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/282 (31%), Positives = 128/282 (45%), Gaps = 36/282 (12%)
Query: 23 IYVWGYN-HSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG HS G+ +R P +L G L IACG HTA ++S G
Sbjct: 305 LYEWGEGIHSLGFGKNQCQRSPWFPHKLISTSDGISV------LKIACGQWHTAIISSLG 358
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
L+T+G FG LG G HP++V+ L+ KS++CG TAAI E GT+ +
Sbjct: 359 KLYTYGYGTFGVLGHGDTHSVVHPKEVESLRGSRAKSVACGPWHTAAIV---ETSGTLKS 415
Query: 142 S----RLWVWGQNQG-----SNFPRLFWGAFTPNTIIC---QVSCGSVHVVALSECGLLQ 189
S +L+ WG G +N + I C QVSCG L+ G++
Sbjct: 416 SAPGGKLFTWGDAGGGKLGHTNKKSKLVPTRVESLIDCDFTQVSCGMSLTAVLTITGVVF 475
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAP-ELEKITQVSCGEYHSAAVSENGE 248
G E+GQLG + + + E P + E + +SCG H A ++ NG+
Sbjct: 476 TIGSKEHGQLGNSRS----------DNTSICMVEGPLKTEFVKDISCGSSHVAVLTMNGK 525
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
V+TWG G+ GQLG L P V AL+ + +AC
Sbjct: 526 VFTWGKGTEGQLG---LGDYVDRSSPTLVEALEDKQVDSIAC 564
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 102/206 (49%), Gaps = 21/206 (10%)
Query: 211 PRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK 270
PR++K + ++ + ++CGE H+A V++ G+V++WG + G+LGH ++ D
Sbjct: 223 PRLLK--------SSQILNVQSIACGEKHAAIVTKQGQVFSWGEENGGRLGH---KTSDS 271
Query: 271 ELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP-QTRSFSLIPN 329
P+ + +L +K +A G ++CA++ G LY WG LG G Q + P+
Sbjct: 272 VSDPKIIDSLASTPVKTIAFGAKYTCAVSVSGELYEWGEG-IHSLGFGKNQCQRSPWFPH 330
Query: 330 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPS 389
+ + I +L +ACG HT + G+++ +GY ++G + + +P
Sbjct: 331 KLISTSDGISVLK-------IACGQWHTAIISSLGKLYTYGYGTFGVLGHGDTHSVVHPK 383
Query: 390 PVDWCVG-EVRKLAAGGGHSAVLADA 414
V+ G + +A G H+A + +
Sbjct: 384 EVESLRGSRAKSVACGPWHTAAIVET 409
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 150/371 (40%), Gaps = 73/371 (19%)
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKH---PEKVKQLQSEFVKSISCGAHCTAAIAE 131
AA S +F WG + G++ D + P +K Q V+SI+CG A + +
Sbjct: 191 AATDSLKDIFVWG-DVLGRMSDHGHVPATNISLPRLLKSSQILNVQSIACGEKHAAIVTK 249
Query: 132 PRENDGTISTSRLWVWGQNQGSNF----------PRLFWG-AFTPNTIICQVSCGSVHVV 180
+++ WG+ G P++ A TP + ++ G+ +
Sbjct: 250 ---------QGQVFSWGEENGGRLGHKTSDSVSDPKIIDSLASTP---VKTIAFGAKYTC 297
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKG--YAKFLDEAPELEKITQVSCGEY 238
A+S G L WG GI G + + + L + + +++CG++
Sbjct: 298 AVSVSGELYEWG--------EGIHSLGFGKNQCQRSPWFPHKLISTSDGISVLKIACGQW 349
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
H+A +S G++YT+G G+ G LGH S + P+ V +L G K VACG H+ A+
Sbjct: 350 HTAIISSLGKLYTYGYGTFGVLGHGDTHS---VVHPKEVESLRGSRAKSVACGPWHTAAI 406
Query: 299 TSK----------GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
G L+ WG + G+LG + L+P ++ ++
Sbjct: 407 VETSGTLKSSAPGGKLFTWGDAGGGKLG--HTNKKSKLVPTRVES--------LIDCDFT 456
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-------VRKL 401
V+CG S T V G + G +GQ N +S C+ E V+ +
Sbjct: 457 QVSCGMSLTAVLTITGVVFTIGSKEHGQLGNSRS------DNTSICMVEGPLKTEFVKDI 510
Query: 402 AAGGGHSAVLA 412
+ G H AVL
Sbjct: 511 SCGSSHVAVLT 521
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 38/69 (55%)
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
DI+CG H A + +G +FTWG GQLG G R P V+ L+ + V SI+C ++
Sbjct: 509 DISCGSSHVAVLTMNGKVFTWGKGTEGQLGLGDYVDRSSPTLVEALEDKQVDSIACSSNF 568
Query: 126 TAAIAEPRE 134
TA RE
Sbjct: 569 TAVTCVHRE 577
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 84/190 (44%), Gaps = 19/190 (10%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWG--LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
++ ++ E +AA +++ WG LG + GH + LPR + + + ++
Sbjct: 179 QMPKLKQSEGSNAATDSLKDIFVWGDVLGRMSDHGHVPATNIS---LPRLLKSSQILNVQ 235
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
+ACG H+ +T +G +++WG G+ LG +T P D+ +
Sbjct: 236 SIACGEKHAAIVTKQGQVFSWGEENGGR--LGHKTSDSVSDPKIIDS--------LASTP 285
Query: 347 VQLVACGHSHTLVYMRDGRIHGW--GYNSYGQAANEKSTYAWYPSPVDWCVG--EVRKLA 402
V+ +A G +T G ++ W G +S G N+ W+P + V K+A
Sbjct: 286 VKTIAFGAKYTCAVSVSGELYEWGEGIHSLGFGKNQCQRSPWFPHKLISTSDGISVLKIA 345
Query: 403 AGGGHSAVLA 412
G H+A+++
Sbjct: 346 CGQWHTAIIS 355
>gi|338717875|ref|XP_001918080.2| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1-like [Equus caballus]
Length = 4860
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 196/430 (45%), Gaps = 70/430 (16%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
MD + T+RP D ++ K +Y+WG GQ GR + +P P
Sbjct: 3975 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMVPAAAP--------- 4023
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
+ S+ + CG T + ++GT+ G +G+LG G + + LQ V +
Sbjct: 4024 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQL 4083
Query: 120 --SCGAH-CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI---- 168
SCG+ + A+ E E ++ WG ++ +L G P I
Sbjct: 4084 VTSCGSDGHSMALTESGE---------VFSWGDG---DYGKLGHGNSDRQRRPRQIEALQ 4131
Query: 169 ---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV--IKGYAKFLDE 223
+ Q+SCG H ++ G L +G +YG+LG G T RV ++GY
Sbjct: 4132 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY------ 4185
Query: 224 APELEKITQVSCGEYHSAAVSENGE-VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG 282
+I QV+CG H+ AVS +G V+ +G G G+LG L + + P++V L G
Sbjct: 4186 -----QIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCG 4237
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL- 341
I IK VACG S ALT G +Y +G Q +GL P+ R+ + + IP+L
Sbjct: 4238 IGIKKVACGTQFSVALTKDGHVYTFG--QDRLIGL-PEGRA------RNHNRPQQIPVLA 4288
Query: 342 -VVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VR 399
VV ++ VA G HTL +G ++ WG NS GQ + + P+ V G+ +R
Sbjct: 4289 GVV---IEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIR 4345
Query: 400 KLAAGGGHSA 409
+++AG HSA
Sbjct: 4346 QISAGRCHSA 4355
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 185/405 (45%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ P+L P+ ++++ I G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQ------PKL--APSFSDAQ--TIEAGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG----T 138
+ G +G+LG G + +K+L E +SI ++ + +DG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQS---TLKKLTFEPHRSIK-------KVSSSKGSDGHTLAF 473
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ ++ WG + +P+L G ++C VS G H A++E G L
Sbjct: 474 TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGEL 532
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G + P ++K ++ + +VSCG H+ A+S++G
Sbjct: 533 YTWGEGDFGRLGHGDS-NSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 581
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ + AL G+FI+ V G S ALTS G +Y
Sbjct: 582 TVWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVY 636
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + + + ++ G SH L D
Sbjct: 637 AWGCGAC--LGCG-SSEATALRPKLVEE--------LAATRIVDISIGDSHCLALSHDNE 685
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 144/307 (46%), Gaps = 43/307 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V SDG
Sbjct: 4102 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTSDGK 4153
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG++
Sbjct: 4154 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS----TDGSM--- 4206
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNT------IIC-----QVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T + ++C +V+CG+ VAL++ G + +
Sbjct: 4207 -VWAFGDG---DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4262
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ I A + I V+ G H+ A++ NG+VY
Sbjct: 4263 GQDRLIGLPEG-RARNHNRPQQIPVLAGVV--------IEDVAVGAEHTLALASNGDVYA 4313
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWGGS 310
WG S GQLG L + P V L G I+ ++ G HS A T+ A G S
Sbjct: 4314 WGSNSEGQLG---LGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPVPPRAPGVS 4370
Query: 311 QAGQLGL 317
QLGL
Sbjct: 4371 VPLQLGL 4377
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P I I +V GS +AL+ G + AW
Sbjct: 583 -VWSFG---GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++++ A +I +S G+ H A+S + EVY
Sbjct: 639 GCG--ACLGCGSSEATALRPKLVEELAA--------TRIVDISIGDSHCLALSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDGI I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 99/231 (42%), Gaps = 29/231 (12%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +GQL G V+ A AP + QV CG+ + + NG V
Sbjct: 4001 WGAGRHGQLAEA-------GRNVMVPAA-----APSFSQAQQVICGQNCTFVIQANGTVL 4048
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGALYAW 307
G GS G+LG + S D +L + AL G + + +CG HS ALT G +++W
Sbjct: 4049 ACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSW 4105
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G R R I L VQ+ +CG H+ V DG++
Sbjct: 4106 GDGDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLF 4155
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
+G YG+ ++ P V G ++ ++A G H+ ++ S+
Sbjct: 4156 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSTDGSM 4206
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VSE EVY WG S QL G +E + + +A + + G + +++ G
Sbjct: 368 VSETCEVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ A G G+LGLG +L + + R+I + G HTL +
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RSIKKVSSSKG------SDGHTLAFTT 475
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+G + WG YG+ + S+ YP + + G+V ++AG HSA + +
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
>gi|296196030|ref|XP_002745681.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Callithrix
jacchus]
Length = 1006
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 115/237 (48%), Gaps = 17/237 (7%)
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
VSCG H +A+ G + AWG GQLG G E P+ I KI
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEINFTPKKITTLTGI--------KII 131
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
QVSCG YHS A+S++ +V++WG S GQLG S P+RV +L+GI + VA G
Sbjct: 132 QVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKELSSQAS--PQRVRSLEGIPVAQVAAG 189
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVA 351
G HS AL+ G + WG + AGQL L + S +N+ GV ++
Sbjct: 190 GAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNL-------GVIYIS 242
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
CG HT V +DG++ +G NS GQ + P V+ G V ++ GG H+
Sbjct: 243 CGDEHTAVLSQDGKVFTFGDNSSGQLGYNPTPKKRGPQIVERIDGLVSQIDCGGDHT 299
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 144/317 (45%), Gaps = 52/317 (16%)
Query: 21 SAIYVWGYNHSGQTGRKGRER-QLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
S+++ G N GQ GR+G R L P Q A ++ ++CG EH+ AV
Sbjct: 42 SSVHSCGENSRGQLGRRGAPRGDLPEPVQ---------ALKTLKFNLVSCGKEHSLAVCH 92
Query: 80 DGTLFTWGANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
G +F WGA GQLG G +E P+K+ L + +SCG + + A+++
Sbjct: 93 KGRVFAWGAGSEGQLGIGEFKEINFTPKKITTLTGIKIIQVSCGHYHSLALSK------- 145
Query: 139 ISTSRLWVWGQNQGSN--FPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQ 189
S+++ WG+N + +P + + QV+ G H ALS CG
Sbjct: 146 --DSQVFSWGKNSHGQLGLGKELSSQASPQRVRSLEGIPVAQVAAGGAHSFALSLCGTSF 203
Query: 190 AWGYNEYGQL---GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
WG N GQL GR + + P I G K L + +SCG+ H+A +S++
Sbjct: 204 GWGSNSAGQLALSGRNVQVQS-NKPLSI-GALKNLG-------VIYISCGDEHTAVLSQD 254
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
G+V+T+G S GQLG+ K+ P+ V +DG+ + + CGG H+ A Y
Sbjct: 255 GKVFTFGDNSSGQLGY---NPTPKKRGPQIVERIDGL-VSQIDCGGDHTIA-------YV 303
Query: 307 WGGSQAGQLGLGPQTRS 323
Q G GP S
Sbjct: 304 HTTGQVVSFGHGPSDTS 320
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 138/321 (42%), Gaps = 46/321 (14%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
L A G H + ++ ++ + G N GQLG PE V+ L++ +SCG
Sbjct: 26 LQAASGERHALLLLTNSSVHSCGENSRGQLGRRGAPRGDLPEPVQALKTLKFNLVSCGKE 85
Query: 125 CTAAIAEPRENDGTISTSRLWVW-----GQNQGSNFPRLFWGAFTPNTI-------ICQV 172
+ A+ R++ W GQ F + FTP I I QV
Sbjct: 86 HSLAVCH---------KGRVFAWGAGSEGQLGIGEFKEI---NFTPKKITTLTGIKIIQV 133
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
SCG H +ALS+ + +WG N +GQLG G P+ ++ L+ P + Q
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKELSSQASPQRVRS----LEGIP----VAQ 185
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
V+ G HS A+S G + WG S GQL + P + AL + + ++CG
Sbjct: 186 VAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGD 245
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG-VQLVA 351
H+ L+ G ++ +G + +GQLG P + R I+ +G V +
Sbjct: 246 EHTAVLSQDGKVFTFGDNSSGQLGYNPTPKK------------RGPQIVERIDGLVSQID 293
Query: 352 CGHSHTLVYMR-DGRIHGWGY 371
CG HT+ Y+ G++ +G+
Sbjct: 294 CGGDHTIAYVHTTGQVVSFGH 314
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 117/242 (48%), Gaps = 25/242 (10%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG GQ G G +++ + L G + + ++CGH H+ A++
Sbjct: 93 KGRVFAWGAGSEGQLG-IGEFKEINFTPKKITTLTGI------KIIQVSCGHYHSLALSK 145
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISC-GAHCTA-AIAEPREND 136
D +F+WG N GQLG G E + P++V+ L+ V ++ GAH A ++
Sbjct: 146 DSQVFSWGKNSHGQLGLGKELSSQASPQRVRSLEGIPVAQVAAGGAHSFALSLCGTSFGW 205
Query: 137 GTISTSRLWVWGQN--QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
G+ S +L + G+N SN P L GA N + +SCG H LS+ G + +G N
Sbjct: 206 GSNSAGQLALSGRNVQVQSNKP-LSIGALK-NLGVIYISCGDEHTAVLSQDGKVFTFGDN 263
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEVYTWG 253
GQLG T + +GP++++ ++Q+ CG H+ A V G+V ++G
Sbjct: 264 SSGQLGYNPTPKK-RGPQIVERIDGL---------VSQIDCGGDHTIAYVHTTGQVVSFG 313
Query: 254 LG 255
G
Sbjct: 314 HG 315
>gi|326914182|ref|XP_003203406.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Meleagris
gallopavo]
Length = 537
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 143/304 (47%), Gaps = 51/304 (16%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F +G N LG G + P+K++ L + + S+S G+ + DG +
Sbjct: 49 VFVFGLNCSNCLGTGDSQSTIVPKKLEALCGKKISSLSYGSGPHVLLCT---EDGEV--- 102
Query: 143 RLWVWGQNQGSNFPRLFWGA----FTPNTI--------ICQVSCGSVHVVALSECGLLQA 190
+ WG N + +L GA TP + + +V+CGS H +ALS G L A
Sbjct: 103 --YAWGHN---GYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDGDLYA 157
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WGYN GQ+G G T RV + + + ++CG+ S AV NGEVY
Sbjct: 158 WGYNNCGQVGSGSTANQPTPRRV--------SNCLQDKMVVGIACGQTSSMAVVNNGEVY 209
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
WG GQLG L + +L P RV AL G+ I +ACG H+ ALT +G LYAWG +
Sbjct: 210 GWGYNGNGQLG---LGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGAN 266
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG---VQLVACGHSHT-LVYMRDGRI 366
GQLG G ++ S P+ ++ V++ AC +HT + G++
Sbjct: 267 TYGQLGTGNKSNQLS-------------PLQIMMEKERVVEIAACHSAHTSAAKTQSGQV 313
Query: 367 HGWG 370
+ WG
Sbjct: 314 YMWG 317
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 118/456 (25%), Positives = 186/456 (40%), Gaps = 79/456 (17%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG+N Q G G Q P Q+ L + +++ACG H+ A++ DG
Sbjct: 102 VYAWGHNGYSQLGN-GATNQGVTPVQVCTNLLL------KKVIEVACGSHHSMALSFDGD 154
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
L+ WG N GQ+G G+ + P +V LQ + V I+CG + A+ N+G +
Sbjct: 155 LYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVV----NNGEV-- 208
Query: 142 SRLWVWGQN------QGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
+ WG N G+N +L TP + I Q++CG H +AL++ GLL
Sbjct: 209 ---YGWGYNGNGQLGLGNNGNQL-----TPCRVAALHGVCILQIACGYAHTLALTDEGLL 260
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSEN 246
AWG N YGQLG G L +++ E E++ ++ +C H SAA +++
Sbjct: 261 YAWGANTYGQLGTGNKSNQLSPLQIMM----------EKERVVEIAACHSAHTSAAKTQS 310
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC-GGVHSCALTSKGALY 305
G+VY W G C G +LP + AC V +C T
Sbjct: 311 GQVYMW--------GQC---RGQSVVLPH---------LTHFACTDDVFACFATPAVMWR 350
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFR-NIPILVVPNGVQLVACGHSHTLVYMRDG 364
Q L + + P SD FR + + V V + C H T+
Sbjct: 351 LLSVEQEDFLTVAESLKKEFDSPETSDLKFRVDGKYIHVHKAVLKIRCEHFRTMFQSY-- 408
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL----AAGGGHSAVLADACSLKEL 420
W + ++ +Y Y + +++ + L A G A LK+L
Sbjct: 409 ----WNEDMKEVIEVDQFSYPVYRAFLEYLYTDSVDLPPEDAIGLLDLATSYCENRLKKL 464
Query: 421 CEFRLAESVTLSNASEIEDVASRTGSEALARLCERL 456
C+ + +T+ NA + A R +E L C +
Sbjct: 465 CQHIIKRGITVENAFSLLSAAVRYDAEDLEDFCFKF 500
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 116/236 (49%), Gaps = 30/236 (12%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HV+ +E G + AWG+N Y QLG G T +G+ +V L+K+ +V+CG
Sbjct: 92 HVLLCTEDGEVYAWGHNGYSQLGNGATNQGVTPVQVCTNLL--------LKKVIEVACGS 143
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHSC 296
+HS A+S +G++Y WG + GQ+G S + PRRV L + +ACG S
Sbjct: 144 HHSMALSFDGDLYAWGYNNCGQVGS---GSTANQPTPRRVSNCLQDKMVVGIACGQTSSM 200
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQL--VACG 353
A+ + G +Y WG + GQLGLG + P V +GV + +ACG
Sbjct: 201 AVVNNGEVYGWGYNGNGQLGLGNNGNQLT-------------PCRVAALHGVCILQIACG 247
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
++HTL +G ++ WG N+YGQ + SP+ + + R + HSA
Sbjct: 248 YAHTLALTDEGLLYAWGANTYGQLGTGNKSNQL--SPLQIMMEKERVVEIAACHSA 301
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 17/172 (9%)
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHSCALTS 300
+ N EV+ +GL LG +GD + ++P+++ AL G I ++ G G H T
Sbjct: 44 THNDEVFVFGLNCSNCLG-----TGDSQSTIVPKKLEALCGKKISSLSYGSGPHVLLCTE 98
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
G +YAWG + QLG G + + + ++ + V VACG H++
Sbjct: 99 DGEVYAWGHNGYSQLGNGATNQGVTPVQVCTNLLLKK---------VIEVACGSHHSMAL 149
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
DG ++ WGYN+ GQ + + P V C+ + + G ++ +A
Sbjct: 150 SFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMA 201
>gi|118084892|ref|XP_417063.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Gallus gallus]
Length = 537
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 143/304 (47%), Gaps = 51/304 (16%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F +G N LG G + P+K++ L + + S+S G+ + DG +
Sbjct: 49 VFVFGLNCSNCLGTGDSQSTIVPKKLEALCGKKISSLSYGSGPHVLLCT---EDGEV--- 102
Query: 143 RLWVWGQNQGSNFPRLFWGA----FTPNTI--------ICQVSCGSVHVVALSECGLLQA 190
+ WG N + +L GA TP + + +V+CGS H +ALS G L A
Sbjct: 103 --YAWGHN---GYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDGDLYA 157
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WGYN GQ+G G T RV + + + ++CG+ S AV NGEVY
Sbjct: 158 WGYNNCGQVGSGSTANQPTPRRV--------SNCLQDKMVVGIACGQTSSMAVVNNGEVY 209
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
WG GQLG L + +L P RV AL G+ I +ACG H+ ALT +G LYAWG +
Sbjct: 210 GWGYNGNGQLG---LGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGAN 266
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG---VQLVACGHSHT-LVYMRDGRI 366
GQLG G ++ S P+ ++ V++ AC +HT + G++
Sbjct: 267 TYGQLGTGNKSNQLS-------------PLQIMMEKERVVEIAACHSAHTSAAKTQSGQV 313
Query: 367 HGWG 370
+ WG
Sbjct: 314 YMWG 317
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 117/236 (49%), Gaps = 30/236 (12%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HV+ +E G + AWG+N Y QLG G T +G+ +V L+K+ +V+CG
Sbjct: 92 HVLLCTEDGEVYAWGHNGYSQLGNGATNQGVTPVQVCTNLL--------LKKVIEVACGS 143
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHSC 296
+HS A+S +G++Y WG + GQ+G S + + PRRV L + +ACG S
Sbjct: 144 HHSMALSFDGDLYAWGYNNCGQVGSGSTAN---QPTPRRVSNCLQDKMVVGIACGQTSSM 200
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQL--VACG 353
A+ + G +Y WG + GQLGLG + P V +GV + +ACG
Sbjct: 201 AVVNNGEVYGWGYNGNGQLGLGNNGNQLT-------------PCRVAALHGVCILQIACG 247
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
++HTL +G ++ WG N+YGQ + SP+ + + R + HSA
Sbjct: 248 YAHTLALTDEGLLYAWGANTYGQLGTGNKSNQL--SPLQIMMEKERVVEIAACHSA 301
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 116/456 (25%), Positives = 186/456 (40%), Gaps = 79/456 (17%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG+N Q G G Q P Q+ L + +++ACG H+ A++ DG
Sbjct: 102 VYAWGHNGYSQLGN-GATNQGVTPVQVCTNLLL------KKVIEVACGSHHSMALSFDGD 154
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
L+ WG N GQ+G G+ + P +V LQ + V I+CG + A+ N+G +
Sbjct: 155 LYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVV----NNGEV-- 208
Query: 142 SRLWVWGQN------QGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
+ WG N G+N +L TP + I Q++CG H +AL++ GLL
Sbjct: 209 ---YGWGYNGNGQLGLGNNGNQL-----TPCRVAALHGVCILQIACGYAHTLALTDEGLL 260
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSEN 246
AWG N YGQLG G L +++ E E++ ++ +C H SAA +++
Sbjct: 261 YAWGANTYGQLGTGNKSNQLSPLQIMM----------EKERVVEIAACHSAHTSAAKTQS 310
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC-GGVHSCALTSKGALY 305
G+VY W G C G +LP + AC V +C T
Sbjct: 311 GQVYMW--------GQC---RGQSVVLPH---------LTHFACTDDVFACFATPAVMWR 350
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFR-NIPILVVPNGVQLVACGHSHTLVYMRDG 364
Q L + + P +D F+ + + V V + C H T+
Sbjct: 351 LLSVEQEDFLTVAESLKKEFDSPETADLKFQVDGKYIHVHKAVLKIRCEHFRTMFQSY-- 408
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL----AAGGGHSAVLADACSLKEL 420
W + ++ +Y Y + +++ + L A G A LK+L
Sbjct: 409 ----WNEDMKEVIEIDQFSYPVYRAFLEYLYTDSVDLPPEDAIGLLDLATSYCENRLKKL 464
Query: 421 CEFRLAESVTLSNASEIEDVASRTGSEALARLCERL 456
C+ + +T+ NA + A R +E L C +
Sbjct: 465 CQHIIKRGITVENAFSLLSAAVRYDAEDLEDFCFKF 500
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 140/334 (41%), Gaps = 46/334 (13%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G +A ++V+G N S G G + +PK+L G L
Sbjct: 32 VFGTSANEAIYTTHNDEVFVFGLNCSNCLG-TGDSQSTIVPKKLEA-----LCGKKISSL 85
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDG-TEEGRKHPEKVKQLQSEFVKSISCGAH 124
G H DG ++ WG N + QLG+G T +G + L + V ++CG+H
Sbjct: 86 SYGSG-PHVLLCTEDGEVYAWGHNGYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSH 144
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQ------GSN----FPRLFWGAFTPNTIICQVSC 174
+ A++ DG L+ WG N GS PR ++ ++C
Sbjct: 145 HSMALS----FDG-----DLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVV-GIAC 194
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G +A+ G + WGYN GQLG G L RV A I Q++
Sbjct: 195 GQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQLTPCRV---------AALHGVCILQIA 245
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG 292
CG H+ A+++ G +Y WG + GQLG +G+K +L P +++ ++ AC
Sbjct: 246 CGYAHTLALTDEGLLYAWGANTYGQLG-----TGNKSNQLSPLQIMMEKERVVEIAACHS 300
Query: 293 VH-SCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
H S A T G +Y WG + GQ + P F+
Sbjct: 301 AHTSAAKTQSGQVYMWGQCR-GQSVVLPHLTHFA 333
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 17/172 (9%)
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHSCALTS 300
+ N EV+ +GL LG +GD + ++P+++ AL G I ++ G G H T
Sbjct: 44 THNDEVFVFGLNCSNCLG-----TGDSQSTIVPKKLEALCGKKISSLSYGSGPHVLLCTE 98
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
G +YAWG + QLG G + + + ++ + V VACG H++
Sbjct: 99 DGEVYAWGHNGYSQLGNGATNQGVTPVQVCTNLLLKK---------VIEVACGSHHSMAL 149
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
DG ++ WGYN+ GQ + + P V C+ + + G ++ +A
Sbjct: 150 SFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMA 201
>gi|432930911|ref|XP_004081521.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Oryzias
latipes]
Length = 531
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 137/304 (45%), Gaps = 39/304 (12%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V D +F G N LG G + P+K+ L + S+S G+ +A D
Sbjct: 37 VTHDDEVFVLGLNCSNCLGTGDSQSTIVPKKLDFLNGRKIVSLSYGSGPHVLMAT---ED 93
Query: 137 GTISTSRLWVWGQNQGSNFPR---------LFWGAFTPNTIICQVSCGSVHVVALSECGL 187
G L+ WG N S + A N + +V+CGS H +AL++ G
Sbjct: 94 G-----ELFAWGHNGYSQLGNGTTNQGVAPVLVSANMLNKKVVEVACGSHHSMALTDSGE 148
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWGYN GQ+G G T RV + + + CG+ S AV +NG
Sbjct: 149 VYAWGYNNCGQVGSGSTANQPTPRRV--------SSCLQNKVAVGIVCGQTSSLAVVDNG 200
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
EVY WG GQLG L + +L P R+VAL G+ + + CG H AL+ +G LYAW
Sbjct: 201 EVYGWGYNGNGQLG---LGNNGNQLTPCRLVALQGLCVLQIVCGYAHCLALSDEGVLYAW 257
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRI 366
G + GQLG G ++ S + S+ V++ AC +HT + G++
Sbjct: 258 GSNTYGQLGTGNKSNQLSPVQIMSEK----------ERIVEVAACHSTHTSAAKTQSGQV 307
Query: 367 HGWG 370
+ WG
Sbjct: 308 YMWG 311
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 116/233 (49%), Gaps = 29/233 (12%)
Query: 148 GQNQGSNFPRLFWGAFTPNTIICQVSCGS-VHVVALSECGLLQAWGYNEYGQLGRGITCE 206
G +Q + P+ F I +S GS HV+ +E G L AWG+N Y QLG G T +
Sbjct: 57 GDSQSTIVPKKL--DFLNGRKIVSLSYGSGPHVLMATEDGELFAWGHNGYSQLGNGTTNQ 114
Query: 207 GLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQ 266
G+ P ++ A L++ K+ +V+CG +HS A++++GEVY WG + GQ+G
Sbjct: 115 GV-APVLVS--ANMLNK-----KVVEVACGSHHSMALTDSGEVYAWGYNNCGQVGS---G 163
Query: 267 SGDKELLPRRVVA-LDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
S + PRRV + L + CG S A+ G +Y WG + GQLGLG
Sbjct: 164 STANQPTPRRVSSCLQNKVAVGIVCGQTSSLAVVDNGEVYGWGYNGNGQLGLGNNGNQ-- 221
Query: 326 LIPNESDTYFRNIPILVVPNG--VQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
L P LV G V + CG++H L +G ++ WG N+YGQ
Sbjct: 222 LTPCR----------LVALQGLCVLQIVCGYAHCLALSDEGVLYAWGSNTYGQ 264
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 112/242 (46%), Gaps = 37/242 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G Q P + + N + +++ACG H+ A+ G
Sbjct: 96 LFAWGHNGYSQLG-NGTTNQGVAPVLVSANML------NKKVVEVACGSHHSMALTDSGE 148
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
++ WG N GQ+G G+ + P +V LQ++ I CG + A+ + E G
Sbjct: 149 VYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNKVAVGIVCGQTSSLAVVDNGEVYG---- 204
Query: 142 SRLWVWGQN------QGSNFPRLFWGAFTPNTIIC--QVSCGSVHVVALSECGLLQAWGY 193
WG N G+N +L +C Q+ CG H +ALS+ G+L AWG
Sbjct: 205 -----WGYNGNGQLGLGNNGNQLTPCRLVALQGLCVLQIVCGYAHCLALSDEGVLYAWGS 259
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVYT 251
N YGQLG G L +++ E E+I +V +C H SAA +++G+VY
Sbjct: 260 NTYGQLGTGNKSNQLSPVQIMS----------EKERIVEVAACHSTHTSAAKTQSGQVYM 309
Query: 252 WG 253
WG
Sbjct: 310 WG 311
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 141/334 (42%), Gaps = 46/334 (13%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G +A + ++V G N S G G + +PK+L G L
Sbjct: 26 VFGSSANEAVYVTHDDEVFVLGLNCSNCLG-TGDSQSTIVPKKLDF-----LNGRKIVSL 79
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAH 124
G H DG LF WG N + QLG+GT P V + ++ V ++CG+H
Sbjct: 80 SYGSG-PHVLMATEDGELFAWGHNGYSQLGNGTTNQGVAPVLVSANMLNKKVVEVACGSH 138
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQ------GSN----FPRLFWGAFTPNTIICQVSC 174
+ A+ + E ++ WG N GS PR + N + + C
Sbjct: 139 HSMALTDSGE---------VYAWGYNNCGQVGSGSTANQPTPRRV-SSCLQNKVAVGIVC 188
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G +A+ + G + WGYN GQLG G L R++ A + + Q+
Sbjct: 189 GQTSSLAVVDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLV---------ALQGLCVLQIV 239
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG 292
CG H A+S+ G +Y WG + GQLG +G+K +L P ++++ ++ AC
Sbjct: 240 CGYAHCLALSDEGVLYAWGSNTYGQLG-----TGNKSNQLSPVQIMSEKERIVEVAACHS 294
Query: 293 VH-SCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
H S A T G +Y WG + GQ + P FS
Sbjct: 295 THTSAAKTQSGQVYMWGQCR-GQSIVLPHLTHFS 327
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 18/150 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WGYN +GQ G QL P +L C L I CG+ H A++ +G
Sbjct: 202 VYGWGYNGNGQLGLGNNGNQL-TPCRLVALQGLCV-------LQIVCGYAHCLALSDEGV 253
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+ WG+N +GQLG G + + P ++ + V+ +C + T+A +
Sbjct: 254 LYAWGSNTYGQLGTGNKSNQLSPVQIMSEKERIVEVAACHSTHTSA--------AKTQSG 305
Query: 143 RLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
++++WGQ +G + P L + T + C
Sbjct: 306 QVYMWGQCRGQSIVLPHLTHFSCTDDVFAC 335
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 84/199 (42%), Gaps = 25/199 (12%)
Query: 221 LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVV 278
L+E + K + V+ + EV+ GL LG +GD + ++P+++
Sbjct: 15 LEELSMIRKACVFGSSANEAVYVTHDDEVFVLGLNCSNCLG-----TGDSQSTIVPKKLD 69
Query: 279 ALDGIFIKDVACG-GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRN 337
L+G I ++ G G H T G L+AWG + QLG G + +
Sbjct: 70 FLNGRKIVSLSYGSGPHVLMATEDGELFAWGHNGYSQLGNGTTNQGVA------------ 117
Query: 338 IPILVVPN----GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDW 393
P+LV N V VACG H++ G ++ WGYN+ GQ + + P V
Sbjct: 118 -PVLVSANMLNKKVVEVACGSHHSMALTDSGEVYAWGYNNCGQVGSGSTANQPTPRRVSS 176
Query: 394 CVGEVRKLAAGGGHSAVLA 412
C+ + G ++ LA
Sbjct: 177 CLQNKVAVGIVCGQTSSLA 195
>gi|242077750|ref|XP_002448811.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
gi|241939994|gb|EES13139.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
Length = 879
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 120/416 (28%), Positives = 171/416 (41%), Gaps = 62/416 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDI---ACGHEHTAAVAS 79
IYVWG R G +R P L P +N LD+ ACG +H A V
Sbjct: 37 IYVWGEVICDTISRSGSDRSAYSPGTTTDVLVPKPLESNV-MLDVSYVACGVKHAALVTR 95
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
+FTWG G+LG GT P V+ L V+ I+CG T A+
Sbjct: 96 QSEVFTWGEECSGRLGHGTGTNVFQPRLVESLSICNVELIACGEFHTCAVT--------- 146
Query: 140 STSRLWVWGQ--------NQGSN----FPRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
+T L+ WG GSN P+ G + VSCG+ H ++ G
Sbjct: 147 ATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLD-GLPVSTVSCGTWHTALITSSGQ 205
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE-- 245
L +G +G LG G R Y K ++ L I+ VSCG +H+AAV E
Sbjct: 206 LYTFGDGTFGVLG--------HGNRASCSYPKEVESLKGLRTIS-VSCGVWHTAAVVEVI 256
Query: 246 -------NGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHSC 296
+G+++TWG G +LGH GD+ +L P + +L ACG +
Sbjct: 257 ISQSNASSGKLFTWGDGDKYRLGH-----GDRSSKLKPTCIPSLIDYNFHKAACGHTLTI 311
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
LT+ G ++ G S GQLG PN Y R + + GV VACG H
Sbjct: 312 GLTTSGHIFTVGSSVYGQLG----------NPNNDGRYPRLVEEQLGGGGVVEVACGSYH 361
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 411
V G ++ WG + G+ + P+ V+ V+++A G +A +
Sbjct: 362 VAVLTNAGEVYTWGKGANGRLGHGDIADRKVPTLVEALRDRSVKRVACGSSFTAAI 417
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 138/295 (46%), Gaps = 35/295 (11%)
Query: 17 IPAKSAIYVWG--YNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHT 74
+ A +Y WG +++G G G IPK++ L G P ++CG HT
Sbjct: 145 VTATGDLYTWGDGTHNAGLLGH-GSNVSHWIPKRVSGPLDGLPVST------VSCGTWHT 197
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
A + S G L+T+G FG LG G +P++V+ L+ S+SCG TAA+ E
Sbjct: 198 ALITSSGQLYTFGDGTFGVLGHGNRASCSYPKEVESLKGLRTISVSCGVWHTAAVVEVII 257
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALS 183
+ S+ +L+ WG G + RL G P I + +CG + L+
Sbjct: 258 SQSNASSGKLFTWG--DGDKY-RLGHGDRSSKLKPTCIPSLIDYNFHKAACGHTLTIGLT 314
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
G + G + YGQLG P Y + ++E + +V+CG YH A +
Sbjct: 315 TSGHIFTVGSSVYGQLG---------NPNNDGRYPRLVEEQLGGGGVVEVACGSYHVAVL 365
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
+ GEVYTWG G+ G+LGH + D++ +P V AL +K VACG + A+
Sbjct: 366 TNAGEVYTWGKGANGRLGHGDI--ADRK-VPTLVEALRDRSVKRVACGSSFTAAI 417
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 63/128 (49%), Gaps = 16/128 (12%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
+++ACG H A + + G ++TWG G+LG G RK P V+ L+ VK ++CG+
Sbjct: 353 VEVACGSYHVAVLTNAGEVYTWGKGANGRLGHGDIADRKVPTLVEALRDRSVKRVACGSS 412
Query: 125 CTAAIAEPRENDGTISTSRLWVWG--QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVAL 182
TAAI + + WV G Q+Q S + F FT C +CG VH +
Sbjct: 413 FTAAICQHK-----------WVSGMEQSQCSACRQPF--GFTRKRHNC-YNCGLVHCHSC 458
Query: 183 SECGLLQA 190
S L+A
Sbjct: 459 SSKKALRA 466
>gi|142942429|gb|ABO93003.1| putative regulator of chromosome condensation RCC1 [Solanum
tuberosum]
Length = 951
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 111/407 (27%), Positives = 167/407 (41%), Gaps = 71/407 (17%)
Query: 36 RKGRERQLRIPKQLPPELFGCPAGANSRWLD---IACGHEHTAAVASDGTLFTWGANEFG 92
R G+ RI P L +S LD I+CG+ H V G F+WG G
Sbjct: 285 RIGKSSGTRIDANTPKSL------ESSVVLDVQNISCGNRHAMLVTKQGEAFSWGEEAGG 338
Query: 93 QLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQG 152
+LG G E HP+ +K + V+ I+CG + + A+ S+ L+ WG
Sbjct: 339 RLGHGAETDVSHPKLIKNFKGMNVELIACGEYHSCAVT---------SSGDLYTWGDGAK 389
Query: 153 SN------------FPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLG 200
S+ P+ G + VSCG H ++ G L +G +G LG
Sbjct: 390 SSGLLGHRSEASHWIPKKVCG-LMEGLRVSHVSCGPWHTALITSAGRLFTFGDGTFGALG 448
Query: 201 RGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE-------------NG 247
G G PR ++ + K +V+CG +H+AAV E +G
Sbjct: 449 HGDR-SGCITPREVETFNGL--------KTLKVACGVWHTAAVVELMSGLDSRPSDAPSG 499
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
++TWG G G+LGH GD + L P+ + AL +VAC + ALT+ G +Y
Sbjct: 500 TLFTWGDGDKGKLGH-----GDNKPRLAPQCITALVDKSFSEVACSYAMTVALTTTGRVY 554
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
G + GQLG P S I E +V + V+ ++CG H V
Sbjct: 555 TMGSNVYGQLGC-PLANGMSPICVED---------YLVDSTVEEISCGSHHVAVLTSRTE 604
Query: 366 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
++ WG GQ + P+ VD +V+++ G SA +
Sbjct: 605 VYTWGKGENGQLGHGDCENKCTPTLVDILRDKQVKRIVCGSNFSAAI 651
>gi|74177548|dbj|BAB30989.3| unnamed protein product [Mus musculus]
Length = 596
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 117/237 (49%), Gaps = 17/237 (7%)
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
VSCG H VA+ G + WG GQLG G E P IK A KI
Sbjct: 36 VSCGKEHSVAVCHKGKVFPWGAGSEGQLGIGEFKEISFMPTKIKALAGI--------KII 87
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
QVSCG YHS A+SE+G V++WG S GQLG ++ + +P++V +L+GI + VA G
Sbjct: 88 QVSCGHYHSLALSEDGHVFSWGRNSEGQLGLG--KNSRSQAIPQKVKSLEGIPLAQVAAG 145
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVA 351
G HS AL+ G + WG +++GQL L + S +N+ ++ ++
Sbjct: 146 GTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVI-------YIS 198
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
CG+ HT V +G++ +G NS GQ + P ++ G V ++ H+
Sbjct: 199 CGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQIECASYHT 255
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 116/250 (46%), Gaps = 32/250 (12%)
Query: 84 FTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSR 143
++ G N +GQLG ++ + PE ++ L V +SCG + A+ +
Sbjct: 1 YSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCH---------KGK 51
Query: 144 LWVWG-----QNQGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG Q F + +F P I I QVSCG H +ALSE G + +W
Sbjct: 52 VFPWGAGSEGQLGIGEFKEI---SFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSW 108
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G N GQLG G P+ +K L+ P + QV+ G HS A+S G +
Sbjct: 109 GRNSEGQLGLGKNSRSQAIPQKVKS----LEGIP----LAQVAAGGTHSFALSLTGTSFG 160
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG GQL + ++ P + AL + + ++CG H+ LT +G ++ +GG+
Sbjct: 161 WGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNS 220
Query: 312 AGQLGLGPQT 321
+GQL P++
Sbjct: 221 SGQLQPSPRS 230
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 136/312 (43%), Gaps = 48/312 (15%)
Query: 24 YVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLD-IACGHEHTAAVASDGT 82
Y G N GQ G++ R++ P+ + N +D ++CG EH+ AV G
Sbjct: 1 YSCGDNSWGQLGQR-RDQSTERPEPI--------QALNDLHVDLVSCGKEHSVAVCHKGK 51
Query: 83 LFTWGANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WGA GQLG G +E P K+K L + +SCG + + A++E DG +
Sbjct: 52 VFPWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSE----DGHV-- 105
Query: 142 SRLWVWGQNQGSN--FPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWG 192
+ WG+N + P + + QV+ G H ALS G WG
Sbjct: 106 ---FSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWG 162
Query: 193 YNEYGQLGRGITCEGLQGPRVIKG-YAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
N GQL L G +V + Y A + + +SCG H+A ++E G+V+T
Sbjct: 163 SNRSGQL-------ALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFT 215
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
+G S GQL S +SG + P+ + + G + + C H+ A Y + Q
Sbjct: 216 FGGNSSGQL-QPSPRSGQRG--PQLIEGIGG-RVSQIECASYHTIA-------YVYTTGQ 264
Query: 312 AGQLGLGPQTRS 323
LG GP S
Sbjct: 265 VVSLGRGPSHTS 276
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 84/165 (50%), Gaps = 14/165 (8%)
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
Y+ G S GQLG QS ++ P + AL+ + + V+CG HS A+ KG ++ WG
Sbjct: 1 YSCGDNSWGQLGQRRDQSTER---PEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFPWGA 57
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGW 369
GQLG+G + + S +P + I L +Q V+CGH H+L DG + W
Sbjct: 58 GSEGQLGIG-EFKEISFMPTK-------IKALAGIKIIQ-VSCGHYHSLALSEDGHVFSW 108
Query: 370 GYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGGHSAVLA 412
G NS GQ K++ + P V G + ++AAGG HS L+
Sbjct: 109 GRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALS 153
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 116/249 (46%), Gaps = 39/249 (15%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG GQ G G +++ +P ++ A A + + ++CGH H+ A++
Sbjct: 49 KGKVFPWGAGSEGQLG-IGEFKEISF---MPTKI---KALAGIKIIQVSCGHYHSLALSE 101
Query: 80 DGTLFTWGANEFGQLGDG-TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG +F+WG N GQLG G + P+KVK L+ + ++ G + A++ + G
Sbjct: 102 DGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFG- 160
Query: 139 ISTSRLWVWGQNQGSNFP----RLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
WG N+ ++ + P++I + +SCG H L+E G
Sbjct: 161 --------WGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQ 212
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSEN 246
+ +G N GQL + G +GP++I+G +++Q+ C YH+ A V
Sbjct: 213 VFTFGGNSSGQL-QPSPRSGQRGPQLIEGIGG---------RVSQIECASYHTIAYVYTT 262
Query: 247 GEVYTWGLG 255
G+V + G G
Sbjct: 263 GQVVSLGRG 271
>gi|307106699|gb|EFN54944.1| hypothetical protein CHLNCDRAFT_134694 [Chlorella variabilis]
Length = 434
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 145/326 (44%), Gaps = 49/326 (15%)
Query: 65 LDIACGHEHTAAVASD---GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC 121
+ +ACG H+ A+ S + +WG E GQLG G E R+ P+ V L S+ C
Sbjct: 10 IGLACGSSHSLALISTPSGSMVLSWGRGEDGQLGHGDAEDRQEPQAVFSLLHRGATSVHC 69
Query: 122 GAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------IC 170
GA + A+A G W WG +F RL G F P + +
Sbjct: 70 GAEYSMAVA------GGDKQVYSWGWG-----DFGRLGTGDVKDVFIPCPLPALAGRRVA 118
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
V+CG H + + G L A+G N+ GQ G G + L+ P+++ A + +++
Sbjct: 119 SVACGDTHTLVATAEGQLFAFGRNQNGQCGLGSIQDCLE-PQLVT--------ALQGKEV 169
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
V+CG HS V+ GEVY WG G G +G +S D+ LP L+G+ + V C
Sbjct: 170 VAVACGAEHSMCVTSEGEVYCWGWGRYGNIGDG--ESQDRH-LPTLAKGLEGVKVAQVNC 226
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
G HS A+ GA+Y WG QL G R +P + + V V
Sbjct: 227 GWRHSIAVDEGGAMYTWGWGAYAQLMQG--DRKDHYVPKRVEAVQQ----------VATV 274
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQ 376
A G HT+ GR+ G+N +GQ
Sbjct: 275 AGGWRHTMAADSQGRLFASGWNKFGQ 300
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 169/376 (44%), Gaps = 62/376 (16%)
Query: 16 NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGC-PAGANSRWLDIACGHEHT 74
+ P+ S + WG GQ G E +Q P +F GA S + CG E++
Sbjct: 24 STPSGSMVLSWGRGEDGQLGHGDAED-----RQEPQAVFSLLHRGATS----VHCGAEYS 74
Query: 75 AAVAS-DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEP 132
AVA D +++WG +FG+LG G + P + L V S++CG H A AE
Sbjct: 75 MAVAGGDKQVYSWGWGDFGRLGTGDVKDVFIPCPLPALAGRRVASVACGDTHTLVATAE- 133
Query: 133 RENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVAL 182
+L+ +G+NQ P+L A ++ V+CG+ H + +
Sbjct: 134 ---------GQLFAFGRNQNGQCGLGSIQDCLEPQLV-TALQGKEVVA-VACGAEHSMCV 182
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
+ G + WG+ YG +G G + + R + AK L E K+ QV+CG HS A
Sbjct: 183 TSEGEVYCWGWGRYGNIGDGESQD-----RHLPTLAKGL----EGVKVAQVNCGWRHSIA 233
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHSCALTS 300
V E G +YTWG G+ QL GD++ +P+RV A+ + VA G H+ A S
Sbjct: 234 VDEGGAMYTWGWGAYAQL-----MQGDRKDHYVPKRVEAVQ--QVATVAGGWRHTMAADS 286
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+G L+A G ++ GQ G+G NE + + L VQ V G HT+
Sbjct: 287 QGRLFASGWNKFGQCGVG---------HNEDVVRVQQVEALAGERVVQ-VKSGWKHTMAV 336
Query: 361 MRDGRIHGWGYNSYGQ 376
G+ WG N GQ
Sbjct: 337 THTGKFFSWGRNVNGQ 352
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 135/302 (44%), Gaps = 39/302 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG+ G+ G G + + IP LP A A R +ACG HT ++G
Sbjct: 84 VYSWGWGDFGRLG-TGDVKDVFIPCPLP-------ALAGRRVASVACGDTHTLVATAEGQ 135
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LF +G N+ GQ G G+ + P+ V LQ + V +++CGA + + E
Sbjct: 136 LFAFGRNQNGQCGLGSIQDCLEPQLVTALQGKEVVAVACGAEHSMCVTSEGE-------V 188
Query: 143 RLWVW--------GQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
W W G++Q + P L G + QV+CG H +A+ E G + WG+
Sbjct: 189 YCWGWGRYGNIGDGESQDRHLPTLAKG--LEGVKVAQVNCGWRHSIAVDEGGAMYTWGWG 246
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
Y QL +QG R K ++ ++++ V+ G H+ A G ++ G
Sbjct: 247 AYAQL--------MQGDRKDHYVPKRVE---AVQQVATVAGGWRHTMAADSQGRLFASGW 295
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQ C + + + ++V AL G + V G H+ A+T G ++WG + GQ
Sbjct: 296 NKFGQ---CGVGHNEDVVRVQQVEALAGERVVQVKSGWKHTMAVTHTGKFFSWGRNVNGQ 352
Query: 315 LG 316
LG
Sbjct: 353 LG 354
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 145/325 (44%), Gaps = 63/325 (19%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A+ ++ +G N +GQ G I L P+L G + +ACG EH+ V
Sbjct: 132 AEGQLFAFGRNQNGQCGLG------SIQDCLEPQLVTALQGKEV--VAVACGAEHSMCVT 183
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
S+G ++ WG +G +GDG + R P K L+ V ++CG + A+ E G
Sbjct: 184 SEGEVYCWGWGRYGNIGDGESQDRHLPTLAKGLEGVKVAQVNCGWRHSIAVDE----GGA 239
Query: 139 ISTSRLWVWGQNQGSNFPRLFWGA----FTPNTI-----ICQVSCGSVHVVALSECGLLQ 189
+ T W WG + +L G + P + + V+ G H +A G L
Sbjct: 240 MYT---WGWGA-----YAQLMQGDRKDHYVPKRVEAVQQVATVAGGWRHTMAADSQGRLF 291
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
A G+N++GQ G G + ++ +V EA E++ QV G H+ AV+ G+
Sbjct: 292 ASGWNKFGQCGVGHNEDVVRVQQV---------EALAGERVVQVKSGWKHTMAVTHTGKF 342
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG---ALYA 306
++WG GQLGH +Q + P + AL + GG+++ ALT + LY
Sbjct: 343 FSWGRNVNGQLGHSGMQDSNS---PVELAAL--------SRGGINTDALTRQAQPVVLY- 390
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNES 331
G+ P R ++++P+ +
Sbjct: 391 ---------GVAPSDR-YAVVPDSA 405
>gi|40018552|ref|NP_954515.1| RCC1 and BTB domain-containing protein 2 [Rattus norvegicus]
gi|81885332|sp|Q6P798.1|RCBT2_RAT RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|38197422|gb|AAH61766.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Rattus norvegicus]
gi|149049940|gb|EDM02264.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Rattus norvegicus]
Length = 551
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 115/233 (49%), Gaps = 24/233 (10%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H+V + G + WG+N Y QLG G T GL + + +++ +V+CG
Sbjct: 110 HIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN--------KQVIEVACGS 161
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHSC 296
YHS ++ +GEV+ WG + GQ+G S + + +PRRV L + +ACG + S
Sbjct: 162 YHSLVLTSDGEVFAWGYNNSGQVGSGSTAN---QPIPRRVTGCLQNKVVMSIACGQMCSM 218
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G +Y WG + GQLGLG + + R VQ VACG++H
Sbjct: 219 AVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR----------VQRVACGYAH 268
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
TLV +G+I+ WG NSYGQ + YP+PV V + R + HSA
Sbjct: 269 TLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPV--VVEKDRIIEIAACHSA 319
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 135/298 (45%), Gaps = 39/298 (13%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F G N G LG G + P ++ L + + S+S G+ +A DG + T
Sbjct: 67 IFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLAT---TDGEVFT- 122
Query: 143 RLWVWGQNQGSNFPR---------LFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
WG N S N + +V+CGS H + L+ G + AWGY
Sbjct: 123 ----WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
N GQ+G G T PR + G + + + ++CG+ S AV + GEVY WG
Sbjct: 179 NNSGQVGSGSTANQ-PIPRRVTG-------CLQNKVVMSIACGQMCSMAVVDTGEVYVWG 230
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
GQLG L S + P RV AL GI ++ VACG H+ LT +G +YAWG + G
Sbjct: 231 YNGNGQLG---LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 287
Query: 314 QLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRIHGWG 370
QLG G N+S+ + ++ +++ AC +HT + G ++ WG
Sbjct: 288 QLGTG----------NKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKSQGGHVYMWG 335
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 115/243 (47%), Gaps = 39/243 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G +P + L +N + +++ACG H+ + SDG
Sbjct: 120 VFTWGHNAYSQLG-NGTTNHGLVPCHISTNL------SNKQVIEVACGSYHSLVLTSDGE 172
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P +V LQ++ V SI+CG C+ A+ + T
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAV---------VDT 223
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N N P A + +V+CG H + L++ G + AWG
Sbjct: 224 GEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGA 283
Query: 194 NEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G + + P V+ E ++I ++ +C H SAA S+ G VY
Sbjct: 284 NSYGQLGTGNKSNQSYPTPVVV-----------EKDRIIEIAACHSAHTSAAKSQGGHVY 332
Query: 251 TWG 253
WG
Sbjct: 333 MWG 335
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 138/333 (41%), Gaps = 46/333 (13%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G V I+V G N SG G I + P G L
Sbjct: 50 VFGTAGNEVLYTTVNDEIFVLGTNCSGCLGVGD------IQSTIEPRRLDSLTGKKIASL 103
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAH 124
G H +DG +FTWG N + QLG+GT P + L ++ V ++CG++
Sbjct: 104 SYGSG-PHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSY 162
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSN----------FPRLFWGAFTPNTIICQVSC 174
+ + +DG + + WG N PR G N ++ ++C
Sbjct: 163 HSLVLT----SDGEV-----FAWGYNNSGQVGSGSTANQPIPRRVTGCLQ-NKVVMSIAC 212
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G + +A+ + G + WGYN GQLG G + RV A + ++ +V+
Sbjct: 213 GQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRV---------AALQGIRVQRVA 263
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG 292
CG H+ +++ G++Y WG S GQLG +G+K + P VV I+ AC
Sbjct: 264 CGYAHTLVLTDEGQIYAWGANSYGQLG-----TGNKSNQSYPTPVVVEKDRIIEIAACHS 318
Query: 293 VHSCALTSKGA-LYAWGGSQAGQLGLGPQTRSF 324
H+ A S+G +Y WG + GQ + P F
Sbjct: 319 AHTSAAKSQGGHVYMWGQCR-GQSVILPHLTHF 350
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 20/151 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G Q P A R +ACG+ HT + +G
Sbjct: 226 VYVWGYNGNGQLGLGSSGNQ--------PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 277
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
++ WGAN +GQLG G + + +P V + ++ +C AH +AA ++
Sbjct: 278 IYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKSQ---------G 328
Query: 142 SRLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L T + C
Sbjct: 329 GHVYMWGQCRGQSVILPHLTHFCCTDDVFAC 359
>gi|348525468|ref|XP_003450244.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
[Oreochromis niloticus]
Length = 536
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 140/304 (46%), Gaps = 39/304 (12%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V + +F G N G LG G + P ++ L + + S+S G IA D
Sbjct: 46 VTVNDEVFALGTNCSGCLGLGDLQSTIEPRRIDVLCGKKIVSLSYGTGPHVVIATA---D 102
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTI---ICQVSCGSVHVVALSECGL 187
G + + WG N G+ L + N + + +V+CGS H +AL+ G
Sbjct: 103 GEV-----YAWGHNGYSQLGNGTTNHGLTPALVSTNLLSKRVTEVACGSHHTIALTTDGE 157
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWGYN GQ+G G T RV + + + ++CG+ S AV +NG
Sbjct: 158 VYAWGYNNSGQVGSGSTANQPTPRRV--------SSCLQNKVVVNIACGQLCSMAVLDNG 209
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
E+Y WG GQLG L + + P R+ AL G+ I VACG H+ ALT +G +YAW
Sbjct: 210 EIYGWGYNCNGQLG---LGNNGNQQTPCRIAALQGVNIVQVACGYAHTLALTDEGFVYAW 266
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRI 366
G + GQLG G +S +P +T I V++ AC SHT + G++
Sbjct: 267 GANSYGQLGTG--NKSNQALPTPINTDKERI--------VEVAACHTSHTSAAKTQSGQV 316
Query: 367 HGWG 370
WG
Sbjct: 317 LMWG 320
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 116/227 (51%), Gaps = 22/227 (9%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HVV + G + AWG+N Y QLG G T GL V +++T+V+CG
Sbjct: 95 HVVIATADGEVYAWGHNGYSQLGNGTTNHGLTPALVSTNLLS--------KRVTEVACGS 146
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHSC 296
+H+ A++ +GEVY WG + GQ+G S + + PRRV + L + ++ACG + S
Sbjct: 147 HHTIALTTDGEVYAWGYNNSGQVGSGSTAN---QPTPRRVSSCLQNKVVVNIACGQLCSM 203
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G +Y WG + GQLGLG N + I L N VQ VACG++H
Sbjct: 204 AVLDNGEIYGWGYNCNGQLGLGN---------NGNQQTPCRIAALQGVNIVQ-VACGYAH 253
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 403
TL +G ++ WG NSYGQ + P+P++ + ++AA
Sbjct: 254 TLALTDEGFVYAWGANSYGQLGTGNKSNQALPTPINTDKERIVEVAA 300
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 118/252 (46%), Gaps = 49/252 (19%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A +Y WG+N Q G G P + L + R ++ACG HT A+
Sbjct: 101 ADGEVYAWGHNGYSQLG-NGTTNHGLTPALVSTNLL------SKRVTEVACGSHHTIALT 153
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDG 137
+DG ++ WG N GQ+G G+ + P +V LQ++ V +I+CG C+ A+ + E
Sbjct: 154 TDGEVYAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGE--- 210
Query: 138 TISTSRLWVWGQN------QGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSE 184
++ WG N G+N + TP I I QV+CG H +AL++
Sbjct: 211 ------IYGWGYNCNGQLGLGNNGNQQ-----TPCRIAALQGVNIVQVACGYAHTLALTD 259
Query: 185 CGLLQAWGYNEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SA 241
G + AWG N YGQLG G + + L P + E+I +V +C H SA
Sbjct: 260 EGFVYAWGANSYGQLGTGNKSNQALPTPI-----------NTDKERIVEVAACHTSHTSA 308
Query: 242 AVSENGEVYTWG 253
A +++G+V WG
Sbjct: 309 AKTQSGQVLMWG 320
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 122/287 (42%), Gaps = 49/287 (17%)
Query: 63 RWLDIACGHE----------HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK-QL 111
R +D+ CG + H +DG ++ WG N + QLG+GT P V L
Sbjct: 75 RRIDVLCGKKIVSLSYGTGPHVVIATADGEVYAWGHNGYSQLGNGTTNHGLTPALVSTNL 134
Query: 112 QSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWG 161
S+ V ++CG+H T A+ DG + + WG N PR
Sbjct: 135 LSKRVTEVACGSHHTIALT----TDGEV-----YAWGYNNSGQVGSGSTANQPTPRRVSS 185
Query: 162 AFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFL 221
N ++ ++CG + +A+ + G + WGYN GQLG G R+
Sbjct: 186 CL-QNKVVVNIACGQLCSMAVLDNGEIYGWGYNCNGQLGLGNNGNQQTPCRI-------- 236
Query: 222 DEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVA 279
A + I QV+CG H+ A+++ G VY WG S GQLG +G+K + LP +
Sbjct: 237 -AALQGVNIVQVACGYAHTLALTDEGFVYAWGANSYGQLG-----TGNKSNQALPTPINT 290
Query: 280 LDGIFIKDVACGGVH-SCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
++ AC H S A T G + WG + GQ P FS
Sbjct: 291 DKERIVEVAACHTSHTSAAKTQSGQVLMWGQCR-GQAVASPHLTHFS 336
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 70/151 (46%), Gaps = 20/151 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
IY WGYN +GQ G Q Q P + G N + +ACG+ HT A+ +G
Sbjct: 211 IYGWGYNCNGQLGLGNNGNQ-----QTPCRI-AALQGVN--IVQVACGYAHTLALTDEGF 262
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
++ WGAN +GQLG G + + P + + V+ +C +H +AA + +
Sbjct: 263 VYAWGANSYGQLGTGNKSNQALPTPINTDKERIVEVAACHTSHTSAAKTQ---------S 313
Query: 142 SRLWVWGQNQGSNF--PRLFWGAFTPNTIIC 170
++ +WGQ +G P L + T + C
Sbjct: 314 GQVLMWGQCRGQAVASPHLTHFSSTDDVFAC 344
Score = 38.5 bits (88), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 11/116 (9%)
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT 357
+T ++A G + +G LGLG +S R I +L V L H
Sbjct: 46 VTVNDEVFALGTNCSGCLGLGDL---------QSTIEPRRIDVLCGKKIVSLSYGTGPHV 96
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV--DWCVGEVRKLAAGGGHSAVL 411
++ DG ++ WG+N Y Q N + + P+ V + V ++A G H+ L
Sbjct: 97 VIATADGEVYAWGHNGYSQLGNGTTNHGLTPALVSTNLLSKRVTEVACGSHHTIAL 152
>gi|328783019|ref|XP_395630.4| PREDICTED: hypothetical protein LOC412167, partial [Apis mellifera]
Length = 854
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 149/333 (44%), Gaps = 59/333 (17%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-A 123
+ I+CG EH+A + G LF +G+N++GQLG G + P VK L+ E V ++CG A
Sbjct: 102 ISISCGDEHSAVICQSGRLFVFGSNDWGQLGLGHKNHISKPSCVKVLKPEKVTHVACGRA 161
Query: 124 H---CTAAIAEPRENDGTISTSRLWVWGQNQ-------------GSNFPRLFWGAFTPNT 167
H CT A +++ G +Q ++ P L + + +
Sbjct: 162 HTLICTVA-------------EKIFACGSDQEGQLGRGISAIGDSTSTPVLIYDSGPTGS 208
Query: 168 IICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL 227
I Q+ GS H +AL+ G + AWG N GQLG + P + P
Sbjct: 209 KIVQIVAGSHHSLALTSDGNVFAWGSNLEGQLGLPDISGLVNKPTKV--------HIP-- 258
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG---HCSLQSGDKEL-LPRRVVALDGI 283
E + +++ G YHS ++ENG VY G G+LG + S Q K++ LP V+
Sbjct: 259 EPVKRINTGYYHSIFLTENGLVYVCGESESGKLGIDINFSTQIMPKQMQLPNPVIY---- 314
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
VACGG H+ LT LY G + +GQLGLG S +N
Sbjct: 315 ----VACGGHHTMFLTENNNLYCTGSNSSGQLGLGTNVTELHTPKLLSQGALKN------ 364
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+ ++CG SHT + G+++ G +G+
Sbjct: 365 -ERISRISCGESHTAILTESGKLYTCGDGRHGK 396
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 120/250 (48%), Gaps = 29/250 (11%)
Query: 57 PAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEG------RKH-PEKVK 109
P G S+ + I G H+ A+ SDG +F WG+N GQLG G + H PE VK
Sbjct: 205 PTG--SKIVQIVAGSHHSLALTSDGNVFAWGSNLEGQLGLPDISGLVNKPTKVHIPEPVK 262
Query: 110 QLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTII 169
++ + + SI + + G + +L + P+ PN +I
Sbjct: 263 RINTGYYHSIFLTENGLVYVC------GESESGKLGIDINFSTQIMPKQMQ---LPNPVI 313
Query: 170 CQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVI-KGYAKFLDEAPELE 228
V+CG H + L+E L G N GQLG G L P+++ +G K E
Sbjct: 314 Y-VACGGHHTMFLTENNNLYCTGSNSSGQLGLGTNVTELHTPKLLSQGALKN-------E 365
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
+I+++SCGE H+A ++E+G++YT G G G+LG ++ EL V +FI ++
Sbjct: 366 RISRISCGESHTAILTESGKLYTCGDGRHGKLGLEENENNVHELT--FVQRYKQLFISNI 423
Query: 289 ACGGVHSCAL 298
+CGG H+ +
Sbjct: 424 SCGGCHTILI 433
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ +SCG H + + G L +G N++GQLG G + P +K + E
Sbjct: 101 VISISCGDEHSAVICQSGRLFVFGSNDWGQLGLGHK-NHISKPSCVK--------VLKPE 151
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD----GIF 284
K+T V+CG H+ + +++ G GQLG GD P V+ D G
Sbjct: 152 KVTHVACGRAHTLICTVAEKIFACGSDQEGQLGRGISAIGDSTSTP--VLIYDSGPTGSK 209
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-V 343
I + G HS ALTS G ++AWG + GQLGL P+ S N P V +
Sbjct: 210 IVQIVAGSHHSLALTSDGNVFAWGSNLEGQLGL----------PDISG--LVNKPTKVHI 257
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ-------AANEKSTYAWYPSPVDWCVG 396
P V+ + G+ H++ +G ++ G + G+ + P+PV +
Sbjct: 258 PEPVKRINTGYYHSIFLTENGLVYVCGESESGKLGIDINFSTQIMPKQMQLPNPVIY--- 314
Query: 397 EVRKLAAGGGHSAVLADACSL 417
+A GG H+ L + +L
Sbjct: 315 ----VACGGHHTMFLTENNNL 331
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 54/120 (45%), Gaps = 12/120 (10%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N SGQ G +L PK L A N R I+CG HTA + G
Sbjct: 331 LYCTGSNSSGQLGLGTNVTELHTPK-----LLSQGALKNERISRISCGESHTAILTESGK 385
Query: 83 LFTWGANEFGQLGDGTEEGRKHP----EKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
L+T G G+LG E H ++ KQL F+ +ISCG T I + RE + T
Sbjct: 386 LYTCGDGRHGKLGLEENENNVHELTFVQRYKQL---FISNISCGGCHTILIGQRRETNRT 442
>gi|357520083|ref|XP_003630330.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524352|gb|AET04806.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 279
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/265 (33%), Positives = 132/265 (49%), Gaps = 35/265 (13%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
L I+ G HT A+ + + +WG E GQLG G + R P K+ + + S++CGA
Sbjct: 15 LLISAGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGAD 74
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVS 173
T A R G S W WG +F RL G F P+ I I Q+S
Sbjct: 75 YTVA----RSKSGKDVYS--WGWG-----DFGRLGHGDPSDLFIPHPIRALQGLRIKQIS 123
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
CG H +A++ + +WG N+ G+LG G T + +++ A E +I V
Sbjct: 124 CGDCHCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKIL---------AFEGIRIKMV 174
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
+ G HS A++E+G++Y WG G G LG L + L+P + V +DG I V+CG
Sbjct: 175 AAGAEHSVAITEDGDLYGWGWGRYGNLG---LGDTNDRLIPEK-VNIDGDKIVMVSCGWR 230
Query: 294 HSCALTSKGALYAWGGSQAGQLGLG 318
H+ +++S G LY G S+ GQLG G
Sbjct: 231 HTISISSSGGLYTHGWSKYGQLGHG 255
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 125/252 (49%), Gaps = 27/252 (10%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ +S G+ H VAL ++ +WG E GQLG G T + L ++ A + +
Sbjct: 14 VLLISAGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLLPTKL---------SAFDGQ 64
Query: 229 KITQVSCGEYHSAAVSENG-EVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFI 285
I V+CG ++ A S++G +VY+WG G G+LGH GD +P + AL G+ I
Sbjct: 65 DIVSVTCGADYTVARSKSGKDVYSWGWGDFGRLGH-----GDPSDLFIPHPIRALQGLRI 119
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
K ++CG H A+T + + +WG +Q G+LGLG T S +P + F I I
Sbjct: 120 KQISCGDCHCLAVTMENKVLSWGRNQNGELGLG--TTKDSHVPQKI-LAFEGIRI----- 171
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGG 405
++VA G H++ DG ++GWG+ YG + P V+ ++ ++ G
Sbjct: 172 --KMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVNIDGDKIVMVSCGW 229
Query: 406 GHSAVLADACSL 417
H+ ++ + L
Sbjct: 230 RHTISISSSGGL 241
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 9/103 (8%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I +Y WG+ G G +L IP+++ + + + ++CG HT +
Sbjct: 184 ITEDGDLYGWGWGRYGNLGLGDTNDRL-IPEKVNID--------GDKIVMVSCGWRHTIS 234
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
++S G L+T G +++GQLG G E P KV+ L + + +
Sbjct: 235 ISSSGGLYTHGWSKYGQLGHGDFEDCLVPRKVQALSDKLISQV 277
>gi|444732065|gb|ELW72388.1| RCC1 and BTB domain-containing protein 2 [Tupaia chinensis]
Length = 527
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 115/233 (49%), Gaps = 24/233 (10%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HVV + G + WG+N Y QLG G T GL + + +++ +V+CG
Sbjct: 86 HVVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN--------KQVIEVACGS 137
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHSC 296
YHS ++ +GEV+ WG + GQ+G S + +PRRV L + ++ACG + S
Sbjct: 138 YHSLVLTSDGEVFAWGYNNSGQVGS---GSTANQPIPRRVTGCLQNKVVVNIACGQMCSM 194
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G +Y WG + GQLGLG + + R VQ VACG++H
Sbjct: 195 AVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVSALQGIR----------VQRVACGYAH 244
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
TLV +G+++ WG NSYGQ + YP+PV V + R + HSA
Sbjct: 245 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPV--VVEKDRIIEIAACHSA 295
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 133/300 (44%), Gaps = 43/300 (14%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTAAIAEPRENDGTIS 140
+F G N G LG G + P ++ L + + +S G+ H A E
Sbjct: 43 IFVLGTNCCGCLGLGDVQSTIEPRRLDCLSGKKIACLSYGSGPHVVLATTE--------- 93
Query: 141 TSRLWVWGQNQGSNFPR---------LFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
++ WG N S N + +V+CGS H + L+ G + AW
Sbjct: 94 -GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAW 152
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
GYN GQ+G G T PR + G + + + ++CG+ S AV + GEVY
Sbjct: 153 GYNNSGQVGSGSTANQ-PIPRRVTG-------CLQNKVVVNIACGQMCSMAVVDTGEVYV 204
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG GQLG L S + P RV AL GI ++ VACG H+ LT +G +YAWG +
Sbjct: 205 WGYNGNGQLG---LGSSGNQPTPCRVSALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 261
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRIHGWG 370
GQLG G N+S+ + ++ +++ AC +HT + G ++ WG
Sbjct: 262 YGQLGTG----------NKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 115/243 (47%), Gaps = 39/243 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G +P + L +N + +++ACG H+ + SDG
Sbjct: 96 VFTWGHNAYSQLG-NGTTNHGLVPCHISTNL------SNKQVIEVACGSYHSLVLTSDGE 148
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P +V LQ++ V +I+CG C+ A+ + T
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAV---------VDT 199
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N N P + + +V+CG H + L++ G + AWG
Sbjct: 200 GEVYVWGYNGNGQLGLGSSGNQPTPCRVSALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 259
Query: 194 NEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G + + P V+ E ++I ++ +C H SAA ++ G VY
Sbjct: 260 NSYGQLGTGNKSNQSYPTPVVV-----------EKDRIIEIAACHSAHTSAAKTQGGHVY 308
Query: 251 TWG 253
WG
Sbjct: 309 MWG 311
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 20/151 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G Q P A R +ACG+ HT + +G
Sbjct: 202 VYVWGYNGNGQLGLGSSGNQ--------PTPCRVSALQGIRVQRVACGYAHTLVLTDEGQ 253
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
++ WGAN +GQLG G + + +P V + ++ +C AH +AA +
Sbjct: 254 VYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQG--------- 304
Query: 142 SRLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 305 GHVYMWGQCRGQSVILPHLTHFSCTDDVFAC 335
>gi|149043904|gb|EDL97355.1| rCG61079, isoform CRA_d [Rattus norvegicus]
Length = 245
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/252 (34%), Positives = 122/252 (48%), Gaps = 27/252 (10%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG +GQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGIECQKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSL 326
LGL + FSL
Sbjct: 222 LGLNDENGRFSL 233
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 117/241 (48%), Gaps = 20/241 (8%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+ WG GQ G G + ++ + + + F N + D+ CG HT V DGT
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPR-KSDFF-----VNKKVRDVGCGLRHTVFVLDDGT 54
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTIS 140
++T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 55 VYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLG 200
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG
Sbjct: 113 DGQLGLQGSEECIRVPRNI--KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 201 RGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQL 260
GI C+ P++IK QV+ G HS ++ +G ++ WG GQL
Sbjct: 171 LGIECQKQTSPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 261 G 261
G
Sbjct: 223 G 223
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 109/218 (50%), Gaps = 30/218 (13%)
Query: 163 FTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLD 222
F N + V CG H V + + G + G N+ GQLG + + P +
Sbjct: 30 FFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHE---KSRKKPEQVV------- 79
Query: 223 EAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKEL-LPRRVVALD 281
A + + I VSCGE H+ A+++ G+VY WGL S GQLG LQ ++ + +PR + +L
Sbjct: 80 -ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG---LQGSEECIRVPRNIKSLS 135
Query: 282 GIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR---SFSLIPNESDTYFRNI 338
I I VACG HS AL+ ++ WG ++ GQLGLG + + S LI + I
Sbjct: 136 DIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKS-----LLGI 190
Query: 339 PILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
P + V A G +H+ V G I GWG N +GQ
Sbjct: 191 PFMQV-------AAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 108/228 (47%), Gaps = 31/228 (13%)
Query: 191 WGYNEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
WG YGQLG G I E + PR + +K+ V CG H+ V ++G V
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVN--------KKVRDVGCGLRHTVFVLDDGTV 55
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
YT G +GQLGH + K+ P +VVALD I V+CG H+ AL KG +YAWG
Sbjct: 56 YTCGCNDLGQLGH---EKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGW 369
GQLGL +P RNI L VQ VACG+ H+L + + W
Sbjct: 111 DSDGQLGLQGSEECIR-VP-------RNIKSLSDIQIVQ-VACGYYHSLALSKASEVFCW 161
Query: 370 GYNSYGQAAN----EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLA 412
G N YGQ +K T P + +G ++AAGG HS VL
Sbjct: 162 GQNKYGQLGLGIECQKQT---SPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 59/107 (55%), Gaps = 9/107 (8%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G +G E +R+P+ + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL-------SDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAH 124
+F WG N++GQLG G E + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAH 201
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 7/101 (6%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ S ++ WG N GQ G G E Q + QL L G P ++ +A G H+
Sbjct: 152 LSKASEVFCWGQNKYGQLGL-GIECQKQTSPQLIKSLLGIP------FMQVAAGGAHSFV 204
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVK 117
+ G +F WG N+FGQLG E GR E L + ++
Sbjct: 205 LTLSGAIFGWGRNKFGQLGLNDENGRFSLELSAFLNEDLLR 245
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 17/130 (13%)
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
+ WG S GQLG L D+E++ PR+ ++DV CG H+ + G +Y
Sbjct: 1 MLCWGNASYGQLG---LGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYT 57
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRI 366
G + GQLG +E + + + V+CG +HTL G++
Sbjct: 58 CGCNDLGQLG------------HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQV 105
Query: 367 HGWGYNSYGQ 376
+ WG +S GQ
Sbjct: 106 YAWGLDSDGQ 115
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 363
+ WG + GQLGLG L P +SD + V V+ V CG HT+ + D
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFF--------VNKKVRDVGCGLRHTVFVLDD 52
Query: 364 GRIHGWGYNSYGQAANEKS 382
G ++ G N GQ +EKS
Sbjct: 53 GTVYTCGCNDLGQLGHEKS 71
>gi|297811737|ref|XP_002873752.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297319589|gb|EFH50011.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 396
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 152/351 (43%), Gaps = 69/351 (19%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+AS ++ WG+ E GQLG GT+E ++ V+ L+ V+S+ G+ + AI +D
Sbjct: 1 MASATSVIAWGSGEDGQLGLGTDEEKELASVVEALEPFNVRSVVGGSRNSLAIC----DD 56
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQ 189
G + T W W Q P TP+ + I Q + G H +A+ + G
Sbjct: 57 GKLFT---WGWNQRGTLGHPPETKTESTPSLVKSLASVKIVQAAIGGWHCLAVDDQGRAY 113
Query: 190 AWGYNEYGQLG-------------RGITCEGLQGPRVI----------------KGYA-- 218
AWG NEYGQ G R I P++ +GY
Sbjct: 114 AWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAPQLTVRQVAAGGTHSVVLTREGYVWT 173
Query: 219 -------------KFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSL 265
LE + ++ G +H+ A+ E+G ++ WG GQLG
Sbjct: 174 WGQPWPPGDIKQISIPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDT 233
Query: 266 QSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
Q P V LD + + D+A GG HS ALT++G +Y WG + G+LG G +S
Sbjct: 234 QP---RSFPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSK 290
Query: 326 LIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
++P + + L+ + V+CG +H++ RDGRI +G +G+
Sbjct: 291 MLPQKVN--------LLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGR 333
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 154/362 (42%), Gaps = 57/362 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N G G + P + + A+ + + A G H AV G
Sbjct: 59 LFTWGWNQRGTLGHPPETKTESTPSLVK-------SLASVKIVQAAIGGWHCLAVDDQGR 111
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ WG NE+GQ G EE K E + ++ + V C T + T
Sbjct: 112 AYAWGGNEYGQCG---EEPSKD-ETGRPVRRDIVIPKRCAPQLTVRQVAAGGTHSVVLTR 167
Query: 143 R--LWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
+W WGQ + + P G + ++ G+ H +AL E G L AWG N
Sbjct: 168 EGYVWTWGQPWPPGDIKQISIPVRVQGLEN----VRLIAVGAFHNLALKEDGTLWAWGNN 223
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
EYGQLG G T PR + LD+ + ++ G +HS A++ GEVY WG
Sbjct: 224 EYGQLGTGDTQ-----PRSFPIPVQGLDDL----TLVDIAAGGWHSTALTNEGEVYGWGR 274
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
G G+LG K +LP++V L G I V+CGG HS ALT G ++++G G+
Sbjct: 275 GEHGRLGFGDNDKSSK-MLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGR 333
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVP------------NG---VQLVACGHSHTLV 359
LG G + + + +PI + P +G + VACG HTL
Sbjct: 334 LGYGRKVTTGQPL---------ELPIDIPPLEGRFNHTDEEDDGKWIAKHVACGGRHTLA 384
Query: 360 YM 361
+
Sbjct: 385 IV 386
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 112/242 (46%), Gaps = 44/242 (18%)
Query: 24 YVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTL 83
YVW + GQ G +Q+ IP ++ G + L IA G H A+ DGTL
Sbjct: 170 YVWTW---GQPWPPGDIKQISIPVRV--------QGLENVRL-IAVGAFHNLALKEDGTL 217
Query: 84 FTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSR 143
+ WG NE+GQLG G + R P V+ L + I+ G + A+ N+G +
Sbjct: 218 WAWGNNEYGQLGTGDTQPRSFPIPVQGLDDLTLVDIAAGGWHSTALT----NEGEV---- 269
Query: 144 LWVWGQNQGSNFPRLFWG------AFTPNTI-------ICQVSCGSVHVVALSECGLLQA 190
+ WG+ + RL +G P + I QVSCG H VAL+ G + +
Sbjct: 270 -YGWGRGE---HGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFS 325
Query: 191 WGYNEYGQLGRG---ITCEGLQGPRVI---KGYAKFLDEAPELEKITQ-VSCGEYHSAAV 243
+G ++G+LG G T + L+ P I +G DE + + I + V+CG H+ A+
Sbjct: 326 FGRGDHGRLGYGRKVTTGQPLELPIDIPPLEGRFNHTDEEDDGKWIAKHVACGGRHTLAI 385
Query: 244 SE 245
E
Sbjct: 386 VE 387
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 82/172 (47%), Gaps = 20/172 (11%)
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
V WG G GQLG L + +++ L V AL+ ++ V G +S A+ G L+ WG
Sbjct: 7 VIAWGSGEDGQLG---LGTDEEKELASVVEALEPFNVRSVVGGSRNSLAICDDGKLFTWG 63
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHG 368
+Q G LG P+T++ S + + +++ + + VQ A G H L GR +
Sbjct: 64 WNQRGTLGHPPETKTES-----TPSLVKSLASVKI---VQ-AAIGGWHCLAVDDQGRAYA 114
Query: 369 WGYNSYGQAANEKST-YAWYPSPVDWCVGE-------VRKLAAGGGHSAVLA 412
WG N YGQ E S P D + + VR++AAGG HS VL
Sbjct: 115 WGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAPQLTVRQVAAGGTHSVVLT 166
>gi|391339113|ref|XP_003743897.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
[Metaseiulus occidentalis]
Length = 4496
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 150/314 (47%), Gaps = 55/314 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ G H A+ DG +F+WG E G+LG G + P+ V+ L+ + ++ ++CG+ +
Sbjct: 2744 VHSGGRHALALTIDGRVFSWGEGEDGKLGHGNKISYDRPKLVESLKCKRIRDVACGSSHS 2803
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVS 173
AA+ S+ L+ WG + G N P+L P + + QV+
Sbjct: 2804 AAVT---------SSGELYTWGSGEYGRLGHGDNVPQL-----KPKQVRALSHERVVQVA 2849
Query: 174 CGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
CGS +AL+E + +WG ++G+LG+G +G P+ + E +++
Sbjct: 2850 CGSRDAQTLALTERHWVYSWGDGDFGKLGKG-GSDGSSLPQNV--------ETLNSQQVI 2900
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL-PRRVVALDGIFIKDVAC 290
QV CG S A+S+NG+V+TWG G +LGH S D + P+ V L + V+
Sbjct: 2901 QVECGAQFSLALSKNGKVWTWGKGDYFRLGHGS----DSHVRWPQVVEELADKNVIQVSV 2956
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
G +H A+T +G +YAWG + GQ G N + T R I+ + V
Sbjct: 2957 GALHCIAVTDRGEVYAWGDNDHGQQG------------NGNTTVNRKPAIVRGLEAITNV 3004
Query: 351 ACGHSHTLVYMRDG 364
ACG SH++ + G
Sbjct: 3005 ACGSSHSVAWSSTG 3018
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 140/294 (47%), Gaps = 47/294 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G+ G ++ + E C R D+ACG H+AAV S G
Sbjct: 2760 VFSWG---EGEDGKLGHGNKISYDRPKLVESLKC-----KRIRDVACGSSHSAAVTSSGE 2811
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG+ E+G+LG G + P++V+ L E V ++CG+ R+ T
Sbjct: 2812 LYTWGSGEYGRLGHGDNVPQLKPKQVRALSHERVVQVACGS---------RDAQTLALTE 2862
Query: 143 RLWVW------------GQNQGSNFPRLFWGAFTPNT-IICQVSCGSVHVVALSECGLLQ 189
R WV+ G + GS+ P+ T N+ + QV CG+ +ALS+ G +
Sbjct: 2863 RHWVYSWGDGDFGKLGKGGSDGSSLPQ---NVETLNSQQVIQVECGAQFSLALSKNGKVW 2919
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
WG +Y +LG G + ++ P+V++ A + + QVS G H AV++ GEV
Sbjct: 2920 TWGKGDYFRLGHG-SDSHVRWPQVVEELAD--------KNVIQVSVGALHCIAVTDRGEV 2970
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
Y WG GQ G+ + K + R + A I +VACG HS A +S G
Sbjct: 2971 YAWGDNDHGQQGNGNTTVNRKPAIVRGLEA-----ITNVACGSSHSVAWSSTGT 3019
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 127/250 (50%), Gaps = 31/250 (12%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
+ +ACG H+A + + G L+TWG +G+LG G E + P+KV++L V ++CG+
Sbjct: 3761 VSVACGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKKVEELAGHNVLDVACGSG 3820
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQ----------NQGSNFPRLFWGAFTPNTIICQVSC 174
+ R DG + W WG + G FP+ N + +V C
Sbjct: 3821 DAQTLCVSR--DGLV-----WSWGDGDYGKLGRGGSDGCKFPQKIDS--LQNAGVIKVEC 3871
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
GS VAL+ G++ WG +Y +LG G + + ++ P+ ++G A + +++ QV+
Sbjct: 3872 GSQFSVALTAAGVVYTWGKGDYHRLGHG-SEDHVRRPQAVQG-------ALQGKRVIQVA 3923
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVH 294
G H A +++GEV+TWG GQLG S + + P+ V +L G + VACG H
Sbjct: 3924 VGSLHCVACTDSGEVFTWGDNDEGQLGDGSTNAIQR---PKLVASLKGKKMNRVACGSAH 3980
Query: 295 SCAL-TSKGA 303
+ + TSK A
Sbjct: 3981 TVSWSTSKSA 3990
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 145/317 (45%), Gaps = 52/317 (16%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ G +H A+ S G +F+WG + G+LG G++ + P+ ++ L+ + V S++CG +
Sbjct: 3711 VNSGGKHCLALTSSGDVFSWGEGDDGKLGHGSKALCERPKLIESLRDKHVVSVACGGAHS 3770
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCG 175
A I ++ L+ WG+ + + RL G P + + V+CG
Sbjct: 3771 ACIT---------ASGELYTWGKGR---YGRLGHGDSEDQLKPKKVEELAGHNVLDVACG 3818
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + +S GL+ +WG +YG+LGRG +G + P+ I + +V
Sbjct: 3819 SGDAQTLCVSRDGLVWSWGDGDYGKLGRG-GSDGCKFPQKIDSLQN--------AGVIKV 3869
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGG 292
CG S A++ G VYTWG G +LGH S D P+ V AL G + VA G
Sbjct: 3870 ECGSQFSVALTAAGVVYTWGKGDYHRLGH---GSEDHVRRPQAVQGALQGKRVIQVAVGS 3926
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--V 350
+H A T G ++ WG + GQLG G S + ++ G ++ V
Sbjct: 3927 LHCVACTDSGEVFTWGDNDEGQLGDG------------STNAIQRPKLVASLKGKKMNRV 3974
Query: 351 ACGHSHTLVYMRDGRIH 367
ACG +HT+ + H
Sbjct: 3975 ACGSAHTVSWSTSKSAH 3991
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 115/238 (48%), Gaps = 39/238 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIAC--GHEHT 74
I A +Y WG G+ G E QL+ PK++ EL AG N LD+AC G T
Sbjct: 3773 ITASGELYTWGKGRYGRLGHGDSEDQLK-PKKV-EEL----AGHNV--LDVACGSGDAQT 3824
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
V+ DG +++WG ++G+LG G +G K P+K+ LQ+ V + CG+ + A+
Sbjct: 3825 LCVSRDGLVWSWGDGDYGKLGRGGSDGCKFPQKIDSLQNAGVIKVECGSQFSVALT---- 3880
Query: 135 NDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSE 184
+ ++ WG+ P+ GA +I QV+ GS+H VA ++
Sbjct: 3881 -----AAGVVYTWGKGDYHRLGHGSEDHVRRPQAVQGALQGKRVI-QVAVGSLHCVACTD 3934
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
G + WG N+ GQLG G T +Q P+++ +K+ +V+CG H+ +
Sbjct: 3935 SGEVFTWGDNDEGQLGDGST-NAIQRPKLVASLKG--------KKMNRVACGSAHTVS 3983
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 162/415 (39%), Gaps = 79/415 (19%)
Query: 22 AIYVWGYNHSGQTG--RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
I+ WG+NH GQ G + + I C A R + I G + A+ S
Sbjct: 3620 VIHGWGHNHRGQLGGVEGAKVKTATI----------CDALTALRPVQIVGGEQTLFALTS 3669
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPREND 136
DG ++ G G+LG G E P ++ LQ V ++ G HC A
Sbjct: 3670 DGKVYATGYGAGGRLGIGGTESVSTPTLIETLQHVIVTQVAVNSGGKHCLA--------- 3720
Query: 137 GTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
S+ ++ WG+ P+L + + V+CG H ++ G
Sbjct: 3721 -LTSSGDVFSWGEGDDGKLGHGSKALCERPKLIESLRDKHVV--SVACGGAHSACITASG 3777
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVS 244
L WG YG+LG G + + L+ P+ ++ A + V+C G+ + VS
Sbjct: 3778 ELYTWGKGRYGRLGHGDSEDQLK-PKKVEELAG--------HNVLDVACGSGDAQTLCVS 3828
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
+G V++WG G G+LG D P+++ +L + V CG S ALT+ G +
Sbjct: 3829 RDGLVWSWGDGDYGKLGR---GGSDGCKFPQKIDSLQNAGVIKVECGSQFSVALTAAGVV 3885
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ---------LVACGHS 355
Y WG +LG G S+ + R P VQ VA G
Sbjct: 3886 YTWGKGDYHRLGHG------------SEDHVRR------PQAVQGALQGKRVIQVAVGSL 3927
Query: 356 HTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSA 409
H + G + WG N GQ + + P V G ++ ++A G H+
Sbjct: 3928 HCVACTDSGEVFTWGDNDEGQLGDGSTNAIQRPKLVASLKGKKMNRVACGSAHTV 3982
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 109/244 (44%), Gaps = 30/244 (12%)
Query: 143 RLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
+++VWG N +GS + N ++ GS + +S G + A G
Sbjct: 2653 KVFVWGLNDKDQLGGLKGSKIKEPKFSEVISNLKPMNIAGGSKSLFIVSHDGKVFACGEG 2712
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
G+LG G + + P+ + D +P K V G H+ A++ +G V++WG
Sbjct: 2713 TNGRLGLGHS-HNVAQPKPLT------DLSPYFIKKVAVHSGGRHALALTIDGRVFSWGE 2765
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
G G+LGH + S D+ P+ V +L I+DVACG HS A+TS G LY WG + G+
Sbjct: 2766 GEDGKLGHGNKISYDR---PKLVESLKCKRIRDVACGSSHSAAVTSSGELYTWGSGEYGR 2822
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRDGRIHGWGYN 372
LG G +P R + V VACG + TL ++ WG
Sbjct: 2823 LGHGDN------VPQLKPKQVRALS----HERVVQVACGSRDAQTLALTERHWVYSWGDG 2872
Query: 373 SYGQ 376
+G+
Sbjct: 2873 DFGK 2876
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 104/256 (40%), Gaps = 64/256 (25%)
Query: 186 GLLQAWGYNEYGQLG--------RGITCEGLQGPRVIK--------------------GY 217
G++ WG+N GQLG C+ L R ++ GY
Sbjct: 3619 GVIHGWGHNHRGQLGGVEGAKVKTATICDALTALRPVQIVGGEQTLFALTSDGKVYATGY 3678
Query: 218 AKF---------------LDEAPELEKITQVSC--GEYHSAAVSENGEVYTWGLGSVGQL 260
L E + +TQV+ G H A++ +G+V++WG G G+L
Sbjct: 3679 GAGGRLGIGGTESVSTPTLIETLQHVIVTQVAVNSGGKHCLALTSSGDVFSWGEGDDGKL 3738
Query: 261 GHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLG 318
GH G K L P+ + +L + VACGG HS +T+ G LY WG + G+LG G
Sbjct: 3739 GH-----GSKALCERPKLIESLRDKHVVSVACGGAHSACITASGELYTWGKGRYGRLGHG 3793
Query: 319 PQTRSFSLIPNESDTYFRNIPILVVPNGVQLVAC--GHSHTLVYMRDGRIHGWGYNSYGQ 376
L P + + + + V VAC G + TL RDG + WG YG+
Sbjct: 3794 DSED--QLKPKKVEE--------LAGHNVLDVACGSGDAQTLCVSRDGLVWSWGDGDYGK 3843
Query: 377 AANEKSTYAWYPSPVD 392
S +P +D
Sbjct: 3844 LGRGGSDGCKFPQKID 3859
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 7/124 (5%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG + G G E +R P+ + L G R + +A G H A
Sbjct: 3879 LTAAGVVYTWGKGDYHRLGH-GSEDHVRRPQAVQGALQG------KRVIQVAVGSLHCVA 3931
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
G +FTWG N+ GQLGDG+ + P+ V L+ + + ++CG+ T + + +
Sbjct: 3932 CTDSGEVFTWGDNDEGQLGDGSTNAIQRPKLVASLKGKKMNRVACGSAHTVSWSTSKSAH 3991
Query: 137 GTIS 140
T++
Sbjct: 3992 KTVT 3995
>gi|340502738|gb|EGR29393.1| rcc1 family hect domain protein, putative [Ichthyophthirius
multifiliis]
Length = 879
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 150/316 (47%), Gaps = 51/316 (16%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ CG +HT + +G ++++G E+G LG G P+ + + + + I+CG T
Sbjct: 101 MVCGKKHTVFITEEGKIYSYGIGEYGSLGHGGLIYSDIPKNIIKFNQKKIIQITCGEFHT 160
Query: 127 AAIAEPRENDGTISTSRLWVWGQ---------NQGSNFP---RLFWGAFT------PNTI 168
A+ + T L+ WG+ ++FP +F+ + I
Sbjct: 161 LALTD---------TYDLYSWGRGFEGQLGTGKDCASFPCYVSIFYQKYDYENKKDQKKI 211
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ ++CG+ H +A+S+ G+L AWG GQ G G + + P+++ +E +
Sbjct: 212 VKYIACGAYHSLAISDDGILYAWGEARLGQTGNG-KSKSEKYPKIVNFGNNLKEENILED 270
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI----- 283
KI VS G HSAAV E+GE+YTWGL GQLGH S++S P++VV D +
Sbjct: 271 KIICVSGGYGHSAAVLESGELYTWGLNFNGQLGHGSIKSS---YFPQKVVK-DILGNNIP 326
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAG-----------QLGLGPQTRSFSLIPNESD 332
K V CG ++ A+ G L++WGG G ++ Q R FS I S+
Sbjct: 327 LFKTVQCGYNNTFAIDINGQLWSWGGGNLGHKNNHFQDLPRKITQNTQNRKFSEIHATSN 386
Query: 333 T--YFRNIPILVV-PN 345
+ +F + I+ V PN
Sbjct: 387 SAVFFAPMRIMSVRPN 402
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 144/324 (44%), Gaps = 40/324 (12%)
Query: 90 EFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST-------- 141
+FG++ +E E +K + + + G I E N+G +S+
Sbjct: 11 QFGEIFITNDEVNGSLESLKHFRGRLITNACGGYKKLFIIEESYSNEGLVSSLHAPEYDD 70
Query: 142 -SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLG 200
+ + N +F AF I ++ CG H V ++E G + ++G EYG LG
Sbjct: 71 YDQTFAEEAKSVKNLEDIF-QAFNDKGQIKKMVCGKKHTVFITEEGKIYSYGIGEYGSLG 129
Query: 201 RGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQL 260
G GL + K KF +KI Q++CGE+H+ A+++ ++Y+WG G GQL
Sbjct: 130 HG----GLIYSDIPKNIIKF-----NQKKIIQITCGEFHTLALTDTYDLYSWGRGFEGQL 180
Query: 261 G----------HCSL--QSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
G + S+ Q D E + +K +ACG HS A++ G LYAWG
Sbjct: 181 GTGKDCASFPCYVSIFYQKYDYENKKDQ-----KKIVKYIACGAYHSLAISDDGILYAWG 235
Query: 309 GSQAGQLGLGP-QTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
++ GQ G G ++ + I N + ++ + + V+ G+ H+ + G ++
Sbjct: 236 EARLGQTGNGKSKSEKYPKIVNFGNNLKEE---NILEDKIICVSGGYGHSAAVLESGELY 292
Query: 368 GWGYNSYGQAANEKSTYAWYPSPV 391
WG N GQ + +++P V
Sbjct: 293 TWGLNFNGQLGHGSIKSSYFPQKV 316
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 98/202 (48%), Gaps = 20/202 (9%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
+I ++ CG+ H+ ++E G++Y++G+G G LGH L D +P+ ++ + I +
Sbjct: 97 QIKKMVCGKKHTVFITEEGKIYSYGIGEYGSLGHGGLIYSD---IPKNIIKFNQKKIIQI 153
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSF----SLIPNESDTYFRNIPILVVP 344
CG H+ ALT LY+WG GQLG G SF S+ + D + +V
Sbjct: 154 TCGEFHTLALTDTYDLYSWGRGFEGQLGTGKDCASFPCYVSIFYQKYDYENKKDQKKIV- 212
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDW---------CV 395
+ +ACG H+L DG ++ WG GQ N KS YP V++
Sbjct: 213 ---KYIACGAYHSLAISDDGILYAWGEARLGQTGNGKSKSEKYPKIVNFGNNLKEENILE 269
Query: 396 GEVRKLAAGGGHSAVLADACSL 417
++ ++ G GHSA + ++ L
Sbjct: 270 DKIICVSGGYGHSAAVLESGEL 291
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 105/221 (47%), Gaps = 20/221 (9%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I Q++CG H +AL++ L +WG GQLG G C I Y K+ E + +
Sbjct: 150 IIQITCGEFHTLALTDTYDLYSWGRGFEGQLGTGKDCASFPCYVSI-FYQKYDYENKKDQ 208
Query: 229 K--ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV-----VALD 281
K + ++CG YHS A+S++G +Y WG +GQ G+ +S E P+ V + +
Sbjct: 209 KKIVKYIACGAYHSLAISDDGILYAWGEARLGQTGNGKSKS---EKYPKIVNFGNNLKEE 265
Query: 282 GIFIKDVAC--GGV-HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
I + C GG HS A+ G LY WG + GQLG G S+ D NI
Sbjct: 266 NILEDKIICVSGGYGHSAAVLESGELYTWGLNFNGQLGHGSIKSSYFPQKVVKDILGNNI 325
Query: 339 PILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAAN 379
P+ + V CG+++T +G++ WG + G N
Sbjct: 326 PLF------KTVQCGYNNTFAIDINGQLWSWGGGNLGHKNN 360
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 124/289 (42%), Gaps = 56/289 (19%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I + IY +G G G G I +P + + + I CG HT A
Sbjct: 111 ITEEGKIYSYGIGEYGSLGHGGL-----IYSDIPKNIIKF---NQKKIIQITCGEFHTLA 162
Query: 77 VASDGTLFTWGANEFGQLGDGTEEG----------RKHPEKVKQLQSEFVKSISCGAHCT 126
+ L++WG GQLG G + +K+ + K+ Q + VK I+CGA+ +
Sbjct: 163 LTDTYDLYSWGRGFEGQLGTGKDCASFPCYVSIFYQKYDYENKKDQKKIVKYIACGAYHS 222
Query: 127 AAIAEPRENDGTISTSRLWVWGQ----------NQGSNFPRLF-WG------AFTPNTII 169
AI++ DG L+ WG+ ++ +P++ +G + II
Sbjct: 223 LAISD----DGI-----LYAWGEARLGQTGNGKSKSEKYPKIVNFGNNLKEENILEDKII 273
Query: 170 CQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK 229
C VS G H A+ E G L WG N GQLG G +V+K L L K
Sbjct: 274 C-VSGGYGHSAAVLESGELYTWGLNFNGQLGHGSIKSSYFPQKVVKD---ILGNNIPLFK 329
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
Q CG ++ A+ NG++++WG G+ LGH + D LPR++
Sbjct: 330 TVQ--CGYNNTFAIDINGQLWSWGGGN---LGHKNNHFQD---LPRKIT 370
>gi|386780927|ref|NP_001247543.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
gi|402902026|ref|XP_003913930.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
[Papio anubis]
gi|355754700|gb|EHH58601.1| Regulator of chromosome condensation and BTB domain-containing
protein 1 [Macaca fascicularis]
gi|383419643|gb|AFH33035.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
gi|383419645|gb|AFH33036.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
Length = 531
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 141/304 (46%), Gaps = 39/304 (12%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V D +F +G N LG G + P+K++ L + +KS+S G+ ++ D
Sbjct: 37 VTDDDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLSGKKIKSLSYGSGPHVLLST---ED 93
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQV---SCGSVHVVALSECGL 187
G + + WG N G+ + N +I QV +CGS H +AL+ G
Sbjct: 94 GVV-----YAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGE 148
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWGYN GQ+G G T PR + ++++ ++CG+ S AV +NG
Sbjct: 149 VFAWGYNNCGQVGSGSTANQ-PTPRKVT-------NCLHIKRVVGIACGQTSSMAVLDNG 200
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
EVY WG GQLG L + +L P RV AL + + + CG H+ ALT +G LYAW
Sbjct: 201 EVYGWGYNGNGQLG---LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAW 257
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRI 366
G + GQLG G + S P + V++ AC +HT + G +
Sbjct: 258 GANTYGQLGTGNKNNLLS--PAHIMVEKERV--------VEIAACHSAHTSAAKTQGGHV 307
Query: 367 HGWG 370
+ WG
Sbjct: 308 YMWG 311
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 126/269 (46%), Gaps = 37/269 (13%)
Query: 148 GQNQGSNFPRLFWGAFTPNTIICQVSCGS-VHVVALSECGLLQAWGYNEYGQLGRGITCE 206
G NQ + P+ G I +S GS HV+ +E G++ AWG+N Y QLG G T +
Sbjct: 57 GDNQSTLVPKKLEG--LSGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQ 114
Query: 207 GLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQ 266
G+ +V ++++ +V+CG +HS A++ +GEV+ WG + GQ+G S
Sbjct: 115 GIAPIQVCTNLL--------IKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTA 166
Query: 267 SGDKELLPRRVVALDGIFIKDV---ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRS 323
+ + PR+V + + IK V ACG S A+ G +Y WG + GQLGLG
Sbjct: 167 N---QPTPRKVT--NCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ 221
Query: 324 FSLIPNESDTYFRNIPILVVPNG---VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANE 380
+ P+ V V + CG++HTL +G ++ WG N+YGQ
Sbjct: 222 LT-------------PVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268
Query: 381 KSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
SP V + R + HSA
Sbjct: 269 NKNNLL--SPAHIMVEKERVVEIAACHSA 295
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 113/452 (25%), Positives = 177/452 (39%), Gaps = 69/452 (15%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG+N Q G G Q P Q+ C + +++ACG H+ A+A+DG
Sbjct: 95 VVYAWGHNGYSQLGN-GTTNQGIAPIQV------CTNLLIKQVVEVACGSHHSMALAADG 147
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+F WG N GQ+G G+ + P KV L + V I+CG + A+ + E G
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYG--- 204
Query: 141 TSRLWVWGQN------QGSNFPRLFWGAFTPNTIIC--QVSCGSVHVVALSECGLLQAWG 192
WG N G+N +L +C Q+ CG H +AL++ GLL AWG
Sbjct: 205 ------WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G L ++ E E++ ++ +C H SAA ++ G VY
Sbjct: 259 ANTYGQLGTGNKNNLLSPAHIM----------VEKERVVEIAACHSAHTSAAKTQGGHVY 308
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC-GGVHSCALTSKGALYAWGG 309
W G C G +LP + +C V +C T +
Sbjct: 309 MW--------GQC---RGQSVILPH---------LTHFSCTDDVFACFATPAVSWRLLSV 348
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFR-NIPILVVPNGVQLVACGHSHTLVYMRDGRIHG 368
L + + P +D FR + + V V + C H ++
Sbjct: 349 EHEDFLTVAESLKKEFDSPETADLKFRIDGKYIHVHKAVLKIRCEHFRSMFQSY------ 402
Query: 369 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL----AAGGGHSAVLADACSLKELCEFR 424
W + ++ +Y Y + + + + L A G A LK+LC+
Sbjct: 403 WNEDMKEVIEIDQFSYPVYRAFLQYLYTDTVDLPPEDAIGLLDLATSYCENRLKKLCQHI 462
Query: 425 LAESVTLSNASEIEDVASRTGSEALARLCERL 456
+ +T+ NA + A R +E L C +
Sbjct: 463 IKRGITVENAFSLFSAAVRYDAEDLEEFCFKF 494
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 141/334 (42%), Gaps = 46/334 (13%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G +A + ++V+G N+S G G + +PK+L +G + L
Sbjct: 26 VFGTSASEALYVTDDDEVFVFGLNYSNCLG-TGDNQSTLVPKKLEG-----LSGKKIKSL 79
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV-KQLQSEFVKSISCGAH 124
G H DG ++ WG N + QLG+GT P +V L + V ++CG+H
Sbjct: 80 SYGSG-PHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSH 138
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQ------GSN----FPRLFWGAFTPNTIICQVSC 174
+ A+A E ++ WG N GS PR ++ ++C
Sbjct: 139 HSMALAADGE---------VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVV-GIAC 188
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G +A+ + G + WGYN GQLG G L RV A + Q+
Sbjct: 189 GQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRV---------AALHSVCVNQIV 239
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGG 292
CG H+ A+++ G +Y WG + GQLG +G+K L P ++ ++ AC
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLG-----TGNKNNLLSPAHIMVEKERVVEIAACHS 294
Query: 293 VH-SCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
H S A T G +Y WG + GQ + P FS
Sbjct: 295 AHTSAAKTQGGHVYMWGQCR-GQSVILPHLTHFS 327
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 17/173 (9%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHSCALT 299
V+++ EV+ +GL LG +GD + L+P+++ L G IK ++ G G H T
Sbjct: 37 VTDDDEVFVFGLNYSNCLG-----TGDNQSTLVPKKLEGLSGKKIKSLSYGSGPHVLLST 91
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
G +YAWG + QLG G + + I ++ L++ V+ VACG H++
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTN--------LLIKQVVE-VACGSHHSMA 142
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
DG + WGYN+ GQ + + P V C+ R + G ++ +A
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMA 195
>gi|350408000|ref|XP_003488267.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
impatiens]
Length = 534
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 140/306 (45%), Gaps = 43/306 (14%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTAAIAEPRE 134
+ D ++ G+N G LG G + +P+KV+ L + +K+ + G H A E
Sbjct: 39 ITRDKIVYALGSNTSGCLGTGDDCNTFYPKKVEALCGKDIKTFAYGKGPHVLALTEE--- 95
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI--------ICQVSCGSVHVVALSECG 186
+++ WG N F P + I ++CGS H +AL+ G
Sbjct: 96 -------GKVYSWGHNSHGELGNCFANNMIPMLVTRNLSDEFIVDIACGSHHSLALTNEG 148
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ AWG N GQ+G+ + +V A + + +SCG+ S V++
Sbjct: 149 KVYAWGENTSGQVGKSVNINENTPMKVNSSLAG--------KTVICISCGQSSSMTVTDT 200
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
G+VY WG VGQLG + + ++ P +V L G+ I+ + CG H AL++KGALY
Sbjct: 201 GKVYGWGCNDVGQLG---IGNYVNQVDPCKVTMLAGVVIEKIVCGYAHVLALSNKGALYV 257
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGH-SHTLVYMRDG- 364
WGG+ GQLGLG + S + + + R V VA H +H + M +G
Sbjct: 258 WGGNNYGQLGLGMKMNICSPVQLKQEAMRR----------VLDVATSHYNHISIAMAEGN 307
Query: 365 RIHGWG 370
RI WG
Sbjct: 308 RIFMWG 313
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 23/200 (11%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HV+AL+E G + +WG+N +G+LG + P ++ + L + E I ++CG
Sbjct: 88 HVLALTEEGKVYSWGHNSHGELGNCFANNMI--PMLV---TRNLSD----EFIVDIACGS 138
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV-VALDGIFIKDVACGGVHSC 296
+HS A++ G+VY WG + GQ+G E P +V +L G + ++CG S
Sbjct: 139 HHSLALTNEGKVYAWGENTSGQVGK---SVNINENTPMKVNSSLAGKTVICISCGQSSSM 195
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
+T G +Y WG + GQLG+G N+ D + VV ++ + CG++H
Sbjct: 196 TVTDTGKVYGWGCNDVGQLGIGNYV-------NQVDPCKVTMLAGVV---IEKIVCGYAH 245
Query: 357 TLVYMRDGRIHGWGYNSYGQ 376
L G ++ WG N+YGQ
Sbjct: 246 VLALSNKGALYVWGGNNYGQ 265
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 106/247 (42%), Gaps = 47/247 (19%)
Query: 23 IYVWGYNHSGQTGR--KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
+Y WG+N G+ G + + + L E +DIACG H+ A+ ++
Sbjct: 98 VYSWGHNSHGELGNCFANNMIPMLVTRNLSDEFI----------VDIACGSHHSLALTNE 147
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
G ++ WG N GQ+G P KV L + V ISCG + + +
Sbjct: 148 GKVYAWGENTSGQVGKSVNINENTPMKVNSSLAGKTVICISCGQSSSMTVTD-------- 199
Query: 140 STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVS-----------CGSVHVVALSECGLL 188
T +++ WG N + +L G + C+V+ CG HV+ALS G L
Sbjct: 200 -TGKVYGWGCN---DVGQLGIGNYVNQVDPCKVTMLAGVVIEKIVCGYAHVLALSNKGAL 255
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH--SAAVSEN 246
WG N YGQLG G+ + P +K A + ++ V+ Y+ S A++E
Sbjct: 256 YVWGGNNYGQLGLGMKM-NICSPVQLKQEA--------MRRVLDVATSHYNHISIAMAEG 306
Query: 247 GEVYTWG 253
++ WG
Sbjct: 307 NRIFMWG 313
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 110/254 (43%), Gaps = 46/254 (18%)
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
H A+ +G +++WG N G+LG+ + L EF+ I+CG+H + A+
Sbjct: 88 HVLALTEEGKVYSWGHNSHGELGNCFANNMIPMLVTRNLSDEFIVDIACGSHHSLALT-- 145
Query: 133 RENDGTISTSRLWVWGQNQ----------GSNFPRLFWGAFTPNTIICQVSCGSVHVVAL 182
N+G +++ WG+N N P + T+IC +SCG + +
Sbjct: 146 --NEG-----KVYAWGENTSGQVGKSVNINENTPMKVNSSLAGKTVIC-ISCGQSSSMTV 197
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
++ G + WG N+ GQLG G + +V + +EKI CG H A
Sbjct: 198 TDTGKVYGWGCNDVGQLGIGNYVNQVDPCKVT------MLAGVVIEKIV---CGYAHVLA 248
Query: 243 VSENGEVYTWGLGSVGQLGH------CSLQSGDKELLPRRVVALDGIFIKDVACGGVH-- 294
+S G +Y WG + GQLG CS +E + RRV+ DVA +
Sbjct: 249 LSNKGALYVWGGNNYGQLGLGMKMNICSPVQLKQEAM-RRVL--------DVATSHYNHI 299
Query: 295 SCALTSKGALYAWG 308
S A+ ++ WG
Sbjct: 300 SIAMAEGNRIFMWG 313
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 59/138 (42%), Gaps = 17/138 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG N GQ G Q+ P AG I CG+ H A+++ G
Sbjct: 203 VYGWGCNDVGQLGIGNY------VNQVDPCKVTMLAGVVIE--KIVCGYAHVLALSNKGA 254
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+ WG N +GQLG G + P ++KQ V ++ + +IA N
Sbjct: 255 LYVWGGNNYGQLGLGMKMNICSPVQLKQEAMRRVLDVATSHYNHISIAMAEGN------- 307
Query: 143 RLWVWGQ--NQGSNFPRL 158
R+++WG+ Q FP L
Sbjct: 308 RIFMWGECLGQSITFPVL 325
Score = 38.1 bits (87), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEH--TAAV 77
K A+YVWG N+ GQ G G + + P QL E A R LD+A H + + A+
Sbjct: 252 KGALYVWGGNNYGQLGL-GMKMNICSPVQLKQE-------AMRRVLDVATSHYNHISIAM 303
Query: 78 ASDGTLFTWG 87
A +F WG
Sbjct: 304 AEGNRIFMWG 313
>gi|403298208|ref|XP_003939923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Saimiri
boliviensis boliviensis]
Length = 4860
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 127/429 (29%), Positives = 191/429 (44%), Gaps = 68/429 (15%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
MD + T+RP D ++ K +Y+WG GQ GR + +P P
Sbjct: 3975 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMVPAAAP--------- 4023
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
+ S+ + CG T + ++GT+ G +G+LG G + + LQ V +
Sbjct: 4024 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQL 4083
Query: 120 --SCGAH-CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI---- 168
SCG+ + A+ E E ++ WG ++ +L G P I
Sbjct: 4084 VTSCGSDGHSMALTESGE---------VFSWGDG---DYGKLGHGNSDRQRRPRQIEALQ 4131
Query: 169 ---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV--IKGYAKFLDE 223
+ Q+SCG H ++ G L +G +YG+LG G T RV ++GY
Sbjct: 4132 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY------ 4185
Query: 224 APELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
+I QV+CG H+ AVS +G V W G G G L + + P++V L GI
Sbjct: 4186 -----QIGQVACGLNHTLAVSADGSV-VWAFGD-GDYGKLGLGNSTAKSSPQKVDVLCGI 4238
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
IK VACG S ALT G +Y +G Q +GL P+ R+ + + IP+L
Sbjct: 4239 GIKKVACGTQFSVALTKDGHVYTFG--QDRLIGL-PEGRA------RNHNRPQQIPVLA- 4288
Query: 344 PNGVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRK 400
GV + VA G HTL +G ++ WG NS GQ + + P+ V G+ VR+
Sbjct: 4289 --GVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQ 4346
Query: 401 LAAGGGHSA 409
++AG HSA
Sbjct: 4347 ISAGRCHSA 4355
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 181/405 (44%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ PK P + S I G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQ-PKLAP---------SFSDAQTIEAGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG----T 138
+ G +G+LG G + +K+L E +SI ++ + +DG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQS---TLKKLTFEPHRSIK-------KVSSSKGSDGHTLAF 473
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ ++ WG + +P+L G ++C VS G H A++E G L
Sbjct: 474 TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGEL 532
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G P ++K ++ + +VSCG H+ A+S++G
Sbjct: 533 YTWGEGDFGRLGHG-DSNSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 581
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ + AL G+FI+ V G S ALTS G +Y
Sbjct: 582 TVWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVY 636
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V V+ G SH L D
Sbjct: 637 AWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-VSIGDSHCLALSHDNE 685
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 144/307 (46%), Gaps = 43/307 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V SDG
Sbjct: 4102 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTSDGK 4153
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG++
Sbjct: 4154 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA----DGSV--- 4206
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNT------IIC-----QVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T + ++C +V+CG+ VAL++ G + +
Sbjct: 4207 -VWAFGDG---DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4262
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ I A + I V+ G H+ A++ NG+VY
Sbjct: 4263 GQDRLIGLPEG-RARNHNRPQQIPVLAGVI--------IEDVAVGAEHTLALASNGDVYA 4313
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWGGS 310
WG S GQLG L + P V L G ++ ++ G HS A T+ A G S
Sbjct: 4314 WGSNSEGQLG---LGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVS 4370
Query: 311 QAGQLGL 317
QLGL
Sbjct: 4371 VPLQLGL 4377
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P I I +V GS +AL+ G + AW
Sbjct: 583 -VWSFG---GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I VS G+ H A+S + EVY
Sbjct: 639 GCG--ACLGCGSSEATALRPKLIEELAA--------TRIVDVSIGDSHCLALSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDGI I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 30/228 (13%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +GQL G V+ A AP + QV CG+ + + NG V
Sbjct: 4001 WGAGRHGQLAEA-------GRNVMVPAA-----APSFSQAQQVICGQNCTFVIQANGTVL 4048
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGALYAW 307
G GS G+LG + S D +L + AL G + + +CG HS ALT G +++W
Sbjct: 4049 ACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSW 4105
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G R R I L VQ+ +CG H+ V DG++
Sbjct: 4106 GDGDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLF 4155
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
+G YG+ ++ P V G ++ ++A G H+ AV AD
Sbjct: 4156 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 4203
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VSE EVY WG S QL G +E + + +A + + G + +++ G
Sbjct: 368 VSETCEVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ A G G+LGLG +L + + R+I + G HTL +
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RSIKKVSSSKG------SDGHTLAFTT 475
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+G + WG YG+ + S+ YP + + G+V ++AG HSA + +
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
>gi|449518441|ref|XP_004166250.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
Length = 463
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 162/362 (44%), Gaps = 55/362 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIAC---GHEHTAAVAS 79
+++WG G+ G G E + +P NSR + C G H+ A+ +
Sbjct: 139 VWIWGKGDGGRLGF-GHENPVFVPT------------LNSRLESVRCIALGGLHSVALNA 185
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
G +FTWG FG LG P V+ +K I+ TAAI E E
Sbjct: 186 LGQVFTWGYGGFGALGHSVYHRELVPRLVEGSWRGRIKHIATSGAHTAAITESGE----- 240
Query: 140 STSRLWVWGQNQGSNFPRLFW--------GAFTPNTI------ICQVSCGSVHVVALSEC 185
++ WG+++G L G P + + VSCG +AL
Sbjct: 241 ----VYTWGRDEGDGRLGLGPGRGPNEGGGLSIPCRVRALPAPVAAVSCGGFFTMALGVD 296
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G L WG N +LGRG G + P+ + L++ P I Q+ CG YHS A++
Sbjct: 297 GKLWNWGANTNFELGRGNNIGGWE-PKPVPS----LEDTP----IIQIVCGGYHSLALTG 347
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V +WG G GQLGH S+Q+ E +PR + AL + +AC G S A+T++G LY
Sbjct: 348 DGKVLSWGYGGHGQLGHSSIQN---EKVPRVIDALADKRVSYIACCGSSSAAVTAEGKLY 404
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTL-VYMRDG 364
WG ++ QLG+ P P E F + P V VA G SH + + +R G
Sbjct: 405 MWGNAKDSQLGV-PGLPEVQTSPVE--VIFLTEDDGLGPYHVLSVAVGASHAMCLVLRRG 461
Query: 365 RI 366
R+
Sbjct: 462 RM 463
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 151/352 (42%), Gaps = 53/352 (15%)
Query: 71 HEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIA 130
H + A + L +WG GQLG G EE R +P V L + +++ + +
Sbjct: 49 HSNNAGTIAILQLLSWGRGSSGQLGGGIEEIRLYPSPVANLSVPNIHTLALAPGQLPSFS 108
Query: 131 EPRENDG-----------------TISTSRLWVWGQNQGSNFPRLFWG----AFTP--NT 167
++ G + ++W+WG+ G RL +G F P N+
Sbjct: 109 GDNQDSGDDGSFELGISCGLFHSSLLVNGKVWIWGKGDGG---RLGFGHENPVFVPTLNS 165
Query: 168 IICQVSC---GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
+ V C G +H VAL+ G + WGY +G LG + L PR+++G +
Sbjct: 166 RLESVRCIALGGLHSVALNALGQVFTWGYGGFGALGHSVYHRELV-PRLVEGSWR----- 219
Query: 225 PELEKITQVSCGEYHSAAVSENGEVYTWGL----GSVGQLGHCSLQSGDKELLPRRVVAL 280
+I ++ H+AA++E+GEVYTWG G +G G +P RV AL
Sbjct: 220 ---GRIKHIATSGAHTAAITESGEVYTWGRDEGDGRLGLGPGRGPNEGGGLSIPCRVRAL 276
Query: 281 DGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI 340
+ V+CGG + AL G L+ WG + +LG G + P S + PI
Sbjct: 277 PAP-VAAVSCGGFFTMALGVDGKLWNWGANTNFELGRGNNIGGWEPKPVPS---LEDTPI 332
Query: 341 LVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVD 392
+Q+V CG H+L DG++ WGY +GQ + P +D
Sbjct: 333 ------IQIV-CGGYHSLALTGDGKVLSWGYGGHGQLGHSSIQNEKVPRVID 377
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 136/313 (43%), Gaps = 68/313 (21%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A ++ WGY G G R+L +P+ + G R IA HTAA+
Sbjct: 185 ALGQVFTWGYGGFGALGHSVYHREL-VPRLVEGSWRG-------RIKHIATSGAHTAAIT 236
Query: 79 SDGTLFTWGANEFGQLGDGTEE-----------GRKHPEKVKQLQSEFVKSISCGAHCTA 127
G ++TWG +E GDG G P +V+ L + V ++SCG T
Sbjct: 237 ESGEVYTWGRDE----GDGRLGLGPGRGPNEGGGLSIPCRVRALPAP-VAAVSCGGFFTM 291
Query: 128 AIAEPRENDGTISTSRLWVWGQN------QGSNFPRLFWGAFTP-------NTIICQVSC 174
A+ DG +LW WG N +G+N G + P +T I Q+ C
Sbjct: 292 ALGV----DG-----KLWNWGANTNFELGRGNNI-----GGWEPKPVPSLEDTPIIQIVC 337
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G H +AL+ G + +WGY +GQLG + + + PRVI A ++++ ++
Sbjct: 338 GGYHSLALTGDGKVLSWGYGGHGQLGHS-SIQNEKVPRVIDALAD--------KRVSYIA 388
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL---DGI---FIKDV 288
C SAAV+ G++Y WG QLG L + + P V+ L DG+ + V
Sbjct: 389 CCGSSSAAVTAEGKLYMWGNAKDSQLGVPGLP--EVQTSPVEVIFLTEDDGLGPYHVLSV 446
Query: 289 ACGGVHSCALTSK 301
A G H+ L +
Sbjct: 447 AVGASHAMCLVLR 459
>gi|395822793|ref|XP_003784693.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Otolemur
garnettii]
Length = 4828
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 196/430 (45%), Gaps = 70/430 (16%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
MD + T+RP D ++ K +Y+WG GQ GR + +P P
Sbjct: 3943 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMVPAAAP--------- 3991
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
+ S+ + CG T + ++GT+ G +G+LG G + + LQ V +
Sbjct: 3992 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQL 4051
Query: 120 --SCGAH-CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI---- 168
SCG+ + A+ E E ++ WG ++ +L G P I
Sbjct: 4052 VTSCGSDGHSMALTESGE---------VFSWGDG---DYGKLGHGNSDRQRRPRQIEALQ 4099
Query: 169 ---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV--IKGYAKFLDE 223
+ Q+SCG H ++ G L +G +YG+LG G T RV ++GY
Sbjct: 4100 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY------ 4153
Query: 224 APELEKITQVSCGEYHSAAVSENGE-VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG 282
+I QV+CG H+ AVS +G V+ +G G G+LG L + + P++V L G
Sbjct: 4154 -----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCG 4205
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL- 341
I IK VACG S ALT G +Y +G Q +GL P+ R+ + + IP+L
Sbjct: 4206 IGIKKVACGTQFSVALTKDGHVYTFG--QDRLIGL-PEGRA------RNHNRPQQIPVLA 4256
Query: 342 -VVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VR 399
VV ++ VA G HTL +G ++ WG NS GQ + + P+ V G+ +R
Sbjct: 4257 GVV---IEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIR 4313
Query: 400 KLAAGGGHSA 409
+++AG HSA
Sbjct: 4314 QISAGRCHSA 4323
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 186/405 (45%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ P+L P+ ++++ I G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQ------PKL--APSFSDAQ--TIEAGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG----T 138
+ G +G+LG G + +K+L E +SI ++ + +DG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQS---TLKKLTFEPHRSIK-------KVSSSKGSDGHTLAF 473
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ ++ WG + +P+L G ++C VS G H A++E G L
Sbjct: 474 TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGEL 532
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G + P ++K ++ + +VSCG H+ A+S++G
Sbjct: 533 YTWGEGDFGRLGHGDS-NSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 581
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ + AL G+FI+ V G S ALTS G +Y
Sbjct: 582 TVWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVY 636
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V ++ G SH L D
Sbjct: 637 AWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-ISIGDSHCLALSHDNE 685
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 144/307 (46%), Gaps = 43/307 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V SDG
Sbjct: 4070 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTSDGK 4121
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG++
Sbjct: 4122 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA----DGSM--- 4174
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNT------IIC-----QVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T + ++C +V+CG+ VAL++ G + +
Sbjct: 4175 -VWAFGDG---DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4230
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ I A + I V+ G H+ A++ NG+VY
Sbjct: 4231 GQDRLIGLPEG-RARNHNRPQQIPVLAGVV--------IEDVAVGAEHTLALASNGDVYA 4281
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWGGS 310
WG S GQLG L + P V L G I+ ++ G HS A T+ A G S
Sbjct: 4282 WGSNSEGQLG---LGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPVPPRAPGVS 4338
Query: 311 QAGQLGL 317
QLGL
Sbjct: 4339 VPLQLGL 4345
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P I I +V GS +AL+ G + AW
Sbjct: 583 -VWSFG---GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I +S G+ H A+S + EVY
Sbjct: 639 GCG--ACLGCGSSEATALRPKLIEELAA--------TRIVDISIGDSHCLALSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDGI I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 30/228 (13%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +GQL G V+ A AP + QV CG+ + + NG V
Sbjct: 3969 WGAGRHGQLAEA-------GRNVMVPAA-----APSFSQAQQVICGQNCTFVIQANGTVL 4016
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGALYAW 307
G GS G+LG + S D +L + AL G + + +CG HS ALT G +++W
Sbjct: 4017 ACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSW 4073
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G R R I L VQ+ +CG H+ V DG++
Sbjct: 4074 GDGDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLF 4123
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
+G YG+ ++ P V G ++ ++A G H+ AV AD
Sbjct: 4124 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 4171
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VSE EVY WG S QL G +E + + +A + + G + +++ G
Sbjct: 368 VSETCEVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ A G G+LGLG +L + + R+I + G HTL +
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RSIKKVSSSKG------SDGHTLAFTT 475
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+G + WG YG+ + S+ YP + + G+V ++AG HSA + +
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
>gi|354500509|ref|XP_003512342.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Cricetulus
griseus]
gi|344258048|gb|EGW14152.1| RCC1 and BTB domain-containing protein 1 [Cricetulus griseus]
Length = 531
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 142/305 (46%), Gaps = 41/305 (13%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V + +F +G N LG G + P+K++ L + +KS+S G+ ++ D
Sbjct: 37 VTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLST---ED 93
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQV---SCGSVHVVALSECGL 187
G + + WG N G+ + N +I QV +CGS H +AL+ G
Sbjct: 94 GVV-----YAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGE 148
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWGYN GQ+G G T PR + +++ ++CG+ S AV ++G
Sbjct: 149 VFAWGYNNCGQVGSGSTANQ-PTPRKVTS-------CLHTKRVVSIACGQTSSMAVLDSG 200
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
EVY WG GQLG L + +L P RV AL + + + CG H+ ALT +G LYAW
Sbjct: 201 EVYGWGYNGNGQLG---LGNNGNQLTPVRVAALQSVCVNQIVCGYAHTLALTDEGLLYAW 257
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG-VQLVACGHSHT-LVYMRDGR 365
G + GQLG G + S PI+V V++ AC +HT + G
Sbjct: 258 GANTYGQLGTGSKNNLLS-----------PTPIMVEKERVVEIAACHSTHTSAAKTQGGH 306
Query: 366 IHGWG 370
++ WG
Sbjct: 307 VYMWG 311
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 108/218 (49%), Gaps = 28/218 (12%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HV+ +E G++ AWG+N Y QLG G T +G+ +V ++++ +V+CG
Sbjct: 86 HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLL--------IKQVVEVACGS 137
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHSC 296
+HS A++ +GEV+ WG + GQ+G S + + PR+V + L + +ACG S
Sbjct: 138 HHSMALAADGEVFAWGYNNCGQVGSGSTAN---QPTPRKVTSCLHTKRVVSIACGQTSSM 194
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG---VQLVACG 353
A+ G +Y WG + GQLGLG + P+ V V + CG
Sbjct: 195 AVLDSGEVYGWGYNGNGQLGLGNNGNQLT-------------PVRVAALQSVCVNQIVCG 241
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
++HTL +G ++ WG N+YGQ P+P+
Sbjct: 242 YAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTPI 279
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 116/452 (25%), Positives = 179/452 (39%), Gaps = 69/452 (15%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG+N Q G G Q P Q+ C + +++ACG H+ A+A+DG
Sbjct: 95 VVYAWGHNGYSQLG-NGTTNQGIAPVQV------CTNLLIKQVVEVACGSHHSMALAADG 147
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+F WG N GQ+G G+ + P KV L ++ V SI+CG + A+ + E G
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVTSCLHTKRVVSIACGQTSSMAVLDSGEVYG--- 204
Query: 141 TSRLWVWGQN------QGSNFPRLFWGAFTPNTIIC--QVSCGSVHVVALSECGLLQAWG 192
WG N G+N +L +C Q+ CG H +AL++ GLL AWG
Sbjct: 205 ------WGYNGNGQLGLGNNGNQLTPVRVAALQSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G + L P I E E++ ++ +C H SAA ++ G VY
Sbjct: 259 ANTYGQLGTG-SKNNLLSPTPI---------MVEKERVVEIAACHSTHTSAAKTQGGHVY 308
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC-GGVHSCALTSKGALYAWGG 309
W G C G +LP + +C V +C T +
Sbjct: 309 MW--------GQC---RGQSVVLPH---------LTHFSCTDDVFACFATPAVSWRLLSV 348
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFR-NIPILVVPNGVQLVACGHSHTLVYMRDGRIHG 368
L + + P +D FR + + V V + C H ++
Sbjct: 349 EHEDFLTVADSLKKEFDSPETADLRFRIDGKYIHVHKAVLKIRCEHFRSMFQSY------ 402
Query: 369 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL----AAGGGHSAVLADACSLKELCEFR 424
W + ++ +Y Y + + + + L A G A LK LC+
Sbjct: 403 WNEDMKEVIEIDQFSYPVYRAFLQYLYTDTVDLPPEDAIGLLDLATSYCENRLKRLCQHI 462
Query: 425 LAESVTLSNASEIEDVASRTGSEALARLCERL 456
+ +T+ NA + A R +E L C +
Sbjct: 463 IKRGITVENAFSLFSAAVRYDAEDLEEFCFKF 494
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 139/332 (41%), Gaps = 42/332 (12%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G +A + ++V+G N+S G G + +PK+L G + L
Sbjct: 26 VFGASANEAIYVTDNDEVFVFGLNYSNCLG-TGDNQSTLVPKKLEA-----LCGKKIKSL 79
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV-KQLQSEFVKSISCGAH 124
G H DG ++ WG N + QLG+GT P +V L + V ++CG+H
Sbjct: 80 SYGSG-PHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSH 138
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQ------GSN----FPRLFWGAFTPNTIICQVSC 174
+ A+A E ++ WG N GS PR ++ ++C
Sbjct: 139 HSMALAADGE---------VFAWGYNNCGQVGSGSTANQPTPRKVTSCLHTKRVV-SIAC 188
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G +A+ + G + WGYN GQLG G L RV A + + Q+
Sbjct: 189 GQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRV---------AALQSVCVNQIV 239
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVH 294
CG H+ A+++ G +Y WG + GQLG S + L P ++ ++ AC H
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLG---TGSKNNLLSPTPIMVEKERVVEIAACHSTH 296
Query: 295 -SCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
S A T G +Y WG + GQ + P FS
Sbjct: 297 TSAAKTQGGHVYMWGQCR-GQSVVLPHLTHFS 327
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 85/173 (49%), Gaps = 17/173 (9%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHSCALT 299
V++N EV+ +GL LG +GD + L+P+++ AL G IK ++ G G H T
Sbjct: 37 VTDNDEVFVFGLNYSNCLG-----TGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLST 91
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
G +YAWG + QLG G + + + ++ L++ V+ VACG H++
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTN--------LLIKQVVE-VACGSHHSMA 142
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
DG + WGYN+ GQ + + P V C+ R ++ G ++ +A
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTSCLHTKRVVSIACGQTSSMA 195
>gi|291408944|ref|XP_002720770.1| PREDICTED: regulator of chromosome condensation and BTB domain
containing protein 2 [Oryctolagus cuniculus]
Length = 551
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 143/316 (45%), Gaps = 50/316 (15%)
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTA 127
G+E + +D +F G N G LG G + P ++ L + + +S G+ H
Sbjct: 55 GNEVLYSTVND-EIFVLGTNCSGCLGLGDAQSTIEPRRLDSLSGKKIACLSYGSGPHVVL 113
Query: 128 AIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVS------------CG 175
A E ++ WG N + +L G + CQ+S CG
Sbjct: 114 ATTE----------GEVFTWGHNA---YSQLGNGTTNHGLVPCQISTNLSNKQVIEVACG 160
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
S H + L+ G + AWGYN GQ+G G T PR + G + + + ++C
Sbjct: 161 SYHSLVLTSDGEVFAWGYNNSGQVGSGPTANQ-PIPRRVTG-------CLQNKVVVNIAC 212
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
G+ S AV + GEVY WG GQLG L SG + P RV AL GI ++ VACG H+
Sbjct: 213 GQMCSMAVVDTGEVYVWGYNGNGQLG---LGSGGNQPTPCRVAALQGIRVQRVACGYAHT 269
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS 355
LT +G +YAWG + GQLG G N+S+ + ++ +++ AC +
Sbjct: 270 LVLTDEGQVYAWGANSYGQLGTG----------NKSNQSYPTPVVVEKDRIIEIAACHST 319
Query: 356 HT-LVYMRDGRIHGWG 370
HT + G ++ WG
Sbjct: 320 HTSAAKTQGGHVYMWG 335
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 110/217 (50%), Gaps = 26/217 (11%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HVV + G + WG+N Y QLG G T GL ++ + +++ +V+CG
Sbjct: 110 HVVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSN--------KQVIEVACGS 161
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGD--KELLPRRVV-ALDGIFIKDVACGGVH 294
YHS ++ +GEV+ WG + GQ+G SG + +PRRV L + ++ACG +
Sbjct: 162 YHSLVLTSDGEVFAWGYNNSGQVG-----SGPTANQPIPRRVTGCLQNKVVVNIACGQMC 216
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGH 354
S A+ G +Y WG + GQLGLG + + R VQ VACG+
Sbjct: 217 SMAVVDTGEVYVWGYNGNGQLGLGSGGNQPTPCRVAALQGIR----------VQRVACGY 266
Query: 355 SHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
+HTLV +G+++ WG NSYGQ + YP+PV
Sbjct: 267 AHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPV 303
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 116/243 (47%), Gaps = 39/243 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G +P Q+ L +N + +++ACG H+ + SDG
Sbjct: 120 VFTWGHNAYSQLG-NGTTNHGLVPCQISTNL------SNKQVIEVACGSYHSLVLTSDGE 172
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G + P +V LQ++ V +I+CG C+ A+ + T
Sbjct: 173 VFAWGYNNSGQVGSGPTANQPIPRRVTGCLQNKVVVNIACGQMCSMAV---------VDT 223
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N G N P A + +V+CG H + L++ G + AWG
Sbjct: 224 GEVYVWGYNGNGQLGLGSGGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 283
Query: 194 NEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G + + P V+ E ++I ++ +C H SAA ++ G VY
Sbjct: 284 NSYGQLGTGNKSNQSYPTPVVV-----------EKDRIIEIAACHSTHTSAAKTQGGHVY 332
Query: 251 TWG 253
WG
Sbjct: 333 MWG 335
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 77/175 (44%), Gaps = 21/175 (12%)
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHSCALTSK 301
N E++ G G LG L + PRR+ +L G K +AC G H T++
Sbjct: 64 NDEIFVLGTNCSGCLG---LGDAQSTIEPRRLDSLSG---KKIACLSYGSGPHVVLATTE 117
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
G ++ WG + QLG G T + L+P + T N ++ V ACG H+LV
Sbjct: 118 GEVFTWGHNAYSQLGNG--TTNHGLVPCQISTNLSNKQVIEV-------ACGSYHSLVLT 168
Query: 362 RDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE--VRKLAAGGGHSAVLADA 414
DG + WGYN+ GQ + + P V C+ V +A G S + D
Sbjct: 169 SDGEVFAWGYNNSGQVGSGPTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDT 223
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 18/150 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G Q P A R +ACG+ HT + +G
Sbjct: 226 VYVWGYNGNGQLGLGSGGNQ--------PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 277
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WGAN +GQLG G + + +P V + ++ +C + T+A
Sbjct: 278 VYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSTHTSA--------AKTQGG 329
Query: 143 RLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 330 HVYMWGQCRGQSVILPHLTHFSCTDDVFAC 359
>gi|440911989|gb|ELR61602.1| E3 ubiquitin-protein ligase HERC2 [Bos grunniens mutus]
Length = 4835
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 176/409 (43%), Gaps = 63/409 (15%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
++ ++VWG N Q G L+ K P + N + +A G + AV
Sbjct: 2957 RTKVFVWGLNDKDQLG------GLKGSKIKVPSFSETLSALNV--VQVAGGSKSLFAVTV 3008
Query: 80 DGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPREN 135
+G ++ G G+LG G G P ++ L S VK ++ G H TA
Sbjct: 3009 EGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV----- 3063
Query: 136 DGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
DG +++ WG+ PRL T I ++CGS H AL+
Sbjct: 3064 DG-----KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSS 3116
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAV 243
G L WG EYG+LG G L+ P+++K ++ QV+CG + + A+
Sbjct: 3117 GELYTWGLGEYGRLGHGDNTTQLK-PKMVKVLLG--------HRVIQVACGSRDAQTLAL 3167
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
++ G V++WG G G+LG + + +P+ + L+G + + CG S ALT G
Sbjct: 3168 TDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTKSGV 3224
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLVYM 361
++ WG +LG G SD + R ++ G ++V A G H L
Sbjct: 3225 VWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVT 3272
Query: 362 RDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
G+++ WG N +GQ N +T P+ V G+ + ++A G HS
Sbjct: 3273 DAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3321
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 3006 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQI-----TALSSYVVKKVAVHSGGRHATA 3060
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+
Sbjct: 3061 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------ 3114
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 3115 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3168
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 3169 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 3219
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH S K P+ V L G I VA G +H A+T G
Sbjct: 3220 TKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDAGQ 3276
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 3277 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3323
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 134/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3067 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 3118
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 3119 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 3171
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 3172 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3228
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV++ G+VY
Sbjct: 3229 GKGDYFRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDAGQVYA 3279
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3280 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3325
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 144/327 (44%), Gaps = 50/327 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G + +D+A G H+A V + G
Sbjct: 4061 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRG--TEVVDVAAGGAHSACVTAAGD 4112
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG E + P+ V+ LQ V ++CG+ + +D T+
Sbjct: 4113 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLC--LTDDDTV--- 4167
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 4168 --WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4225
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H SE+GEVYTWG
Sbjct: 4226 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCSEDGEVYTWGD 4276
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G + VACG H+ AW S+
Sbjct: 4277 NDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAWSTSKPAS 4324
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPIL 341
G P +P E + + + IPI+
Sbjct: 4325 AGKLPVQ-----VPMEYN-HLQEIPII 4345
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 175/411 (42%), Gaps = 76/411 (18%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P C A A R + + G + AV +DG
Sbjct: 3955 IYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALAALRPVQLIGGEQTLFAVTADG 4005
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 4006 KLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE------- 4058
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG+ + PR+ T + V+ G H ++ G L
Sbjct: 4059 ---GEVYSWGEAEDGKLGHGNRSPCDRPRVIES--LRGTEVVDVAAGGAHSACVTAAGDL 4113
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSEN 246
WG YG+LG + + L+ P+++ EA + ++ V+C G+ + ++++
Sbjct: 4114 YTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVVDVACGSGDAQTLCLTDD 4164
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4165 DTVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 4221
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTL 358
WG +LG G SD + R P VQ +A G H +
Sbjct: 4222 WGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCV 4263
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
DG ++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4264 CCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4314
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 129/276 (46%), Gaps = 25/276 (9%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N + P+L G + N + H +AL+ G + +WG + G+LG G
Sbjct: 472 RVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG 531
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P+VI ++ + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 532 DTVP-LEEPKVISAFSG----KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 586
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + E +P V L G+ + DVACG + A+T G +++WG G+LG G
Sbjct: 587 ---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 643
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D V V CG ++ +DG+++ WG +
Sbjct: 644 DGCKTPKLIEKLQDL------------DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLG 691
Query: 379 NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ + YP ++ G +V +AAG H L +
Sbjct: 692 HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 124/253 (49%), Gaps = 30/253 (11%)
Query: 134 ENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N +GS + + QV+ GS + A++
Sbjct: 2951 ESAATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3009
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + A G G+LG GI+ + PR I + ++ K V G H+ A++
Sbjct: 3010 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYV------VKKVAVHSGGRHATALTV 3063
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS ALTS G LY
Sbjct: 3064 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELY 3120
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRD 363
WG + G+LG G T L P + + +L+ +Q VACG + TL +
Sbjct: 3121 TWGLGEYGRLGHGDNTT--QLKP-------KMVKVLLGHRVIQ-VACGSRDAQTLALTDE 3170
Query: 364 GRIHGWGYNSYGQ 376
G + WG +G+
Sbjct: 3171 GLVFSWGDGDFGK 3183
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 135/310 (43%), Gaps = 53/310 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQ-SEFVKSISCGAHC 125
+ G +H A++S+G +++WG E G+LG G P ++ L+ +E V + GAH
Sbjct: 4045 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHS 4104
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCG 175
A L+ WG+ + P+L A + ++ V+CG
Sbjct: 4105 ACVTA----------AGDLYTWGKGRYGRLGHSDSEDQLKPKLV-EALQGHRVV-DVACG 4152
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + L++ + +WG +YG+LGRG +G + P I + +V
Sbjct: 4153 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVKV 4203
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G VYTWG G +LGH S D PR+V L G + +A G +
Sbjct: 4204 ECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSL 4260
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLV 350
H + G +Y WG + GQLG G T P LV V V
Sbjct: 4261 HCVCCSEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRV 4307
Query: 351 ACGHSHTLVY 360
ACG +HTL +
Sbjct: 4308 ACGSAHTLAW 4317
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 45/285 (15%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+L A N + H A+A+ G +++WG + G+LG G + P+ +
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVI 542
Query: 109 KQLQ----SEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT 164
+ V I+CG+ +AAI E L+ WG+ N+ RL G+
Sbjct: 543 SAFSGKQAGKHVVHIACGSTYSAAITAEGE---------LYTWGRG---NYGRLGHGSSE 590
Query: 165 PNTI-----------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
I + V+CGS +A++E G + +WG +YG+LGRG +G + P
Sbjct: 591 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTP 649
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
++I+ + +V CG S A++++G+VY+WG G +LGH G +E
Sbjct: 650 KLIEKLQDL--------DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGH-----GTEE 696
Query: 272 LL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ P+ + L G + DVA G H ALT +++WG + Q
Sbjct: 697 HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 136/293 (46%), Gaps = 33/293 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG G+ G G L PK + G AG + + IACG ++AA
Sbjct: 511 LAATGEVYSWGCGDGGRLGH-GDTVPLEEPKVIS-AFSGKQAGKHV--VHIACGSTYSAA 566
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E P V L+ V ++CG+ +A
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA------ 620
Query: 137 GTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
++W WG R G TP I + +V CGS VAL++ G +
Sbjct: 621 -VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQV 679
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG + +LG G T E ++ P++++G + +K+ V+ G H A++E+ E
Sbjct: 680 YSWGKGDNQRLGHG-TEEHVRYPKLLEGL--------QGKKVIDVAAGSTHCLALTEDSE 730
Query: 249 VYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
V++W GS Q H +L+ E P + LD I +ACG S A +S
Sbjct: 731 VHSW--GSNDQCQHFDTLRVTKPE--PSALPGLDTKHIVGIACGPAQSFAWSS 779
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 139/340 (40%), Gaps = 63/340 (18%)
Query: 56 CPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
C AN IAC + ++ +G ++T N P+ V+ L S
Sbjct: 446 CEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRN 495
Query: 116 VKSISCGA--HCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAF 163
+ I+ + H A+A +T ++ WG G P++ AF
Sbjct: 496 IVKIAAHSDGHHYLALA---------ATGEVYSWGCGDGGRLGHGDTVPLEEPKVI-SAF 545
Query: 164 TPNTI---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF 220
+ + ++CGS + A++ G L WG YG+LG G + E P ++ G
Sbjct: 546 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-SSEDEAIPMLVAGLKGL 604
Query: 221 LDEAPELEKITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
K+ V+CG + + AV+ENG+V++WG G G+LG D P+ +
Sbjct: 605 --------KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR---GGSDGCKTPKLIE 653
Query: 279 ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
L + + V CG S ALT G +Y+WG +LG G ++ + R
Sbjct: 654 KLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHG------------TEEHVRYP 701
Query: 339 PILVVPNGVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+L G ++ VA G +H L D +H WG N Q
Sbjct: 702 KLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 138/338 (40%), Gaps = 26/338 (7%)
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEP 132
T + GT++ WG N GQLG K P + L + V+ I A A+
Sbjct: 3946 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADG 4005
Query: 133 RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
+ G + + P L V+ G H +ALS G + +WG
Sbjct: 4006 KLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4065
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
E G+LG G PRVI E+ ++ V+ G HSA V+ G++YTW
Sbjct: 4066 EAEDGKLGHG-NRSPCDRPRVI--------ESLRGTEVVDVAAGGAHSACVTAAGDLYTW 4116
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGS 310
G G G+LGH + +L P+ V AL G + DVACG + LT +++WG
Sbjct: 4117 GKGRYGRLGH---SDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDG 4173
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWG 370
G+LG G +P + D+ + GV V CG ++ + G ++ WG
Sbjct: 4174 DYGKLGRG--GSDGCKVPMKIDS--------LTGLGVVKVECGSQFSVALTKSGAVYTWG 4223
Query: 371 YNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGH 407
Y + + + P V G +V +A G H
Sbjct: 4224 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4261
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 8/107 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG + G G + +R P+Q+ + + IA G H + DG
Sbjct: 4218 AVYTWGKGDYHRLGH-GSDDHVRRPRQVQ-------GLQGKKVIAIATGSLHCVCCSEDG 4269
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
++TWG N+ GQLGDGT + P V LQ + V ++CG+ T A
Sbjct: 4270 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4316
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 74/186 (39%), Gaps = 22/186 (11%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+TQ++C E +S NG VYT S L P+ V L I +A
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------------DTLAPQLVQGLASRNIVKIA 500
Query: 290 C--GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
G H AL + G +Y+WG G+LG G +P E V
Sbjct: 501 AHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPLEEPKVISAFSGKQAGKHV 554
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGG 406
+ACG +++ +G ++ WG +YG+ + S P V G +V +A G G
Sbjct: 555 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSG 614
Query: 407 HSAVLA 412
+ LA
Sbjct: 615 DAQTLA 620
>gi|350578534|ref|XP_001927286.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sus scrofa]
Length = 4859
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 128/430 (29%), Positives = 195/430 (45%), Gaps = 70/430 (16%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
MD + T+RP D ++ K +Y+WG GQ GR + +P P
Sbjct: 3974 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMVPAAAP--------- 4022
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
+ S+ + CG T + ++GT+ G +G+LG G + + LQ V +
Sbjct: 4023 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQL 4082
Query: 120 --SCGAH-CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI---- 168
SCG+ + A+ E E ++ WG ++ +L G P I
Sbjct: 4083 VTSCGSDGHSMALTESGE---------VFSWGDG---DYGKLGHGNSDRQRRPRQIEALQ 4130
Query: 169 ---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV--IKGYAKFLDE 223
+ Q+SCG H ++ G L +G +YG+LG G T RV ++GY
Sbjct: 4131 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY------ 4184
Query: 224 APELEKITQVSCGEYHSAAVSENGE-VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG 282
+I QV+CG H+ AVS +G V+ +G G G+LG L + + P++V L G
Sbjct: 4185 -----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCG 4236
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL- 341
I IK VACG S ALT G +Y +G Q +GL P+ R+ + + IP+L
Sbjct: 4237 IGIKKVACGTQFSVALTKDGHVYTFG--QDRLIGL-PEGRA------RNHNRPQQIPVLA 4287
Query: 342 -VVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VR 399
VV ++ VA G HTL G ++ WG NS GQ + + P+ V G+ VR
Sbjct: 4288 GVV---IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVR 4344
Query: 400 KLAAGGGHSA 409
+++AG HSA
Sbjct: 4345 QISAGRCHSA 4354
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 185/405 (45%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ P+L P+ ++++ I G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQ------PKL--APSFSDAQ--TIEAGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG----T 138
+ G +G+LG G + +K+L E +SI ++ + +DG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQS---TLKKLTFEPHRSIK-------KVSSSKGSDGHTLAF 473
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ ++ WG + +P+L G ++C VS G H A++E G L
Sbjct: 474 TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGEL 532
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G P ++K ++ + +VSCG H+ A+S++G
Sbjct: 533 YTWGEGDFGRLGHG-DSNSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 581
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ + AL G+FI+ V G S ALTS G +Y
Sbjct: 582 TVWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVY 636
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V ++ G SH L D
Sbjct: 637 AWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-ISIGDSHCLALSHDNE 685
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 143/307 (46%), Gaps = 43/307 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V SDG
Sbjct: 4101 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTSDGK 4152
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG++
Sbjct: 4153 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA----DGSM--- 4205
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNT------IIC-----QVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T + ++C +V+CG+ VAL++ G + +
Sbjct: 4206 -VWAFGDG---DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4261
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ I A + I V+ G H+ A++ G+VY
Sbjct: 4262 GQDRLIGLPEG-RARNHNRPQQIPVLAGVV--------IEDVAVGAEHTLALASTGDVYA 4312
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWGGS 310
WG S GQLG L + P V L G ++ ++ G HS A T+ A G S
Sbjct: 4313 WGSNSEGQLG---LGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVS 4369
Query: 311 QAGQLGL 317
QLGL
Sbjct: 4370 VPLQLGL 4376
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P I I +V GS +AL+ G + AW
Sbjct: 583 -VWSFG---GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I +S G+ H A+S + EVY
Sbjct: 639 GCG--ACLGCGSSEATALRPKLIEELAA--------TRIVDISIGDSHCLALSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDGI I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 30/228 (13%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +GQL G V+ A AP + QV CG+ + + NG V
Sbjct: 4000 WGAGRHGQLAEA-------GRNVMVPAA-----APSFSQAQQVICGQNCTFVIQANGTVL 4047
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGALYAW 307
G GS G+LG + S D +L + AL G + + +CG HS ALT G +++W
Sbjct: 4048 ACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSW 4104
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G R R I L VQ+ +CG H+ V DG++
Sbjct: 4105 GDGDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLF 4154
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
+G YG+ ++ P V G ++ ++A G H+ AV AD
Sbjct: 4155 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 4202
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VSE EVY WG S QL G +E + + +A + + G + +++ G
Sbjct: 368 VSETCEVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ A G G+LGLG +L + + R+I + G HTL +
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RSIKKVSSSKG------SDGHTLAFTT 475
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+G + WG YG+ + S+ YP + + G+V ++AG HSA + +
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
>gi|431913810|gb|ELK15239.1| RCC1 and BTB domain-containing protein 1 [Pteropus alecto]
Length = 531
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 143/305 (46%), Gaps = 41/305 (13%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V + +F +G N LG G + P+K++ L + +KS+S G+ ++ D
Sbjct: 37 VTDNDEVFVFGMNYSNCLGTGDSQSTLVPKKLEALCGKKIKSLSYGSGPHVLLST---ED 93
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQV---SCGSVHVVALSECGL 187
G + + WG N G+ + N +I QV +CGS H +AL+ G
Sbjct: 94 GVV-----YAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGE 148
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWGYN GQ+G G T PR + ++K+ ++CG+ S AV +NG
Sbjct: 149 VFAWGYNNCGQVGSGSTANQ-PTPRKVT-------NCLHIKKVVGIACGQTSSMAVLDNG 200
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
EVY WG GQLG L + +L P RV AL + + + CG H+ ALT +G LYAW
Sbjct: 201 EVYGWGYNGNGQLG---LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAW 257
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG-VQLVACGHSHT-LVYMRDGR 365
G + GQLG G + + + I+V V++ AC +HT + G
Sbjct: 258 GANTYGQLGTGNK-----------NNLLNPVHIMVEKERVVEIAACHSAHTSAAKTQGGH 306
Query: 366 IHGWG 370
++ WG
Sbjct: 307 VYMWG 311
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 115/238 (48%), Gaps = 34/238 (14%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HV+ +E G++ AWG+N Y QLG G T +G+ +V ++++ +V+CG
Sbjct: 86 HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLL--------IKQVVEVACGS 137
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV---ACGGVH 294
+HS A++ +GEV+ WG + GQ+G S + + PR+V + + IK V ACG
Sbjct: 138 HHSMALAADGEVFAWGYNNCGQVGSGSTAN---QPTPRKVT--NCLHIKKVVGIACGQTS 192
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG---VQLVA 351
S A+ G +Y WG + GQLGLG + P+ V V +
Sbjct: 193 SMAVLDNGEVYGWGYNGNGQLGLGNNGNQLT-------------PVRVAALHSVCVNQIV 239
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
CG++HTL +G ++ WG N+YGQ +PV V + R + HSA
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLL--NPVHIMVEKERVVEIAACHSA 295
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 113/452 (25%), Positives = 177/452 (39%), Gaps = 69/452 (15%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG+N Q G G Q P Q+ C + +++ACG H+ A+A+DG
Sbjct: 95 VVYAWGHNGYSQLGN-GTTNQGIAPIQV------CTNLLIKQVVEVACGSHHSMALAADG 147
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+F WG N GQ+G G+ + P KV L + V I+CG + A+ + E G
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKKVVGIACGQTSSMAVLDNGEVYG--- 204
Query: 141 TSRLWVWGQN------QGSNFPRLFWGAFTPNTIIC--QVSCGSVHVVALSECGLLQAWG 192
WG N G+N +L +C Q+ CG H +AL++ GLL AWG
Sbjct: 205 ------WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G L ++ E E++ ++ +C H SAA ++ G VY
Sbjct: 259 ANTYGQLGTGNKNNLLNPVHIM----------VEKERVVEIAACHSAHTSAAKTQGGHVY 308
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC-GGVHSCALTSKGALYAWGG 309
W G C G +LP + +C V +C T +
Sbjct: 309 MW--------GQC---RGQSVILPH---------LTSFSCTDDVFACFATPAVSWRLLSV 348
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFR-NIPILVVPNGVQLVACGHSHTLVYMRDGRIHG 368
L + + P +D FR + + V V + C H ++
Sbjct: 349 EHEDFLTVSESLKKEFDSPETADLKFRIDGKYIHVHKAVLKIRCEHFRSMFQSY------ 402
Query: 369 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL----AAGGGHSAVLADACSLKELCEFR 424
W + ++ +Y Y + + + + L A G A LK+LC+
Sbjct: 403 WNEDMKEVIEIDQFSYPVYRAFLQYLYTDAVDLPPEDAIGLLDLATSYCENRLKKLCQHI 462
Query: 425 LAESVTLSNASEIEDVASRTGSEALARLCERL 456
+ +T+ NA + A R +E L C +
Sbjct: 463 IKRGITVENAFSLFSAAVRYDAEDLEEFCFKF 494
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 141/334 (42%), Gaps = 46/334 (13%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G +A + ++V+G N+S G G + +PK+L G + L
Sbjct: 26 VFGNSANEALYVTDNDEVFVFGMNYSNCLG-TGDSQSTLVPKKLEA-----LCGKKIKSL 79
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV-KQLQSEFVKSISCGAH 124
G H DG ++ WG N + QLG+GT P +V L + V ++CG+H
Sbjct: 80 SYGSG-PHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSH 138
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQ------GSN----FPRLFWGAFTPNTIICQVSC 174
+ A+A E ++ WG N GS PR ++ ++C
Sbjct: 139 HSMALAADGE---------VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKKVV-GIAC 188
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G +A+ + G + WGYN GQLG G L RV A + Q+
Sbjct: 189 GQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRV---------AALHSVCVNQIV 239
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGG 292
CG H+ A+++ G +Y WG + GQLG +G+K L P ++ ++ AC
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLG-----TGNKNNLLNPVHIMVEKERVVEIAACHS 294
Query: 293 VH-SCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
H S A T G +Y WG + GQ + P SFS
Sbjct: 295 AHTSAAKTQGGHVYMWGQCR-GQSVILPHLTSFS 327
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 83/174 (47%), Gaps = 15/174 (8%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG-GVHSCALTSK 301
V++N EV+ +G+ LG QS L+P+++ AL G IK ++ G G H T
Sbjct: 37 VTDNDEVFVFGMNYSNCLGTGDSQS---TLVPKKLEALCGKKIKSLSYGSGPHVLLSTED 93
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
G +YAWG + QLG G + + I ++ L++ V+ VACG H++
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAPIQVCTN--------LLIKQVVE-VACGSHHSMALA 144
Query: 362 RDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWC--VGEVRKLAAGGGHSAVLAD 413
DG + WGYN+ GQ + + P V C + +V +A G S + D
Sbjct: 145 ADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKKVVGIACGQTSSMAVLD 198
>gi|345325025|ref|XP_001513851.2| PREDICTED: RCC1 and BTB domain-containing protein 1
[Ornithorhynchus anatinus]
Length = 531
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 143/304 (47%), Gaps = 39/304 (12%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V +F +G N LG G + P+K++ L + +KS+S G+ ++ D
Sbjct: 37 VTHSDEVFVFGVNCSNCLGTGDNQSTIVPKKLELLSGKKIKSLSYGSGPHVLLST---ED 93
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVS---CGSVHVVALSECGL 187
G + + WG N G+ + N +I QV+ CGS H +AL++ G
Sbjct: 94 GIV-----YAWGHNGYSQLGNGTTNQGIAPIQICTNLMIKQVTEVACGSHHSMALADDGE 148
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWGYN GQ+G G T PR + ++++ ++CG+ S AV +NG
Sbjct: 149 VYAWGYNNCGQVGSGSTANQ-PTPRKVTN-------CLHIKRVVSIACGQTSSMAVLDNG 200
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
EVY WG GQLG L + +L P RV AL + + + CG H+ ALT +G LYAW
Sbjct: 201 EVYGWGYNGNGQLG---LGNNGNQLTPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAW 257
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRI 366
G + GQLG G ++ S P + + V++ AC +HT + G +
Sbjct: 258 GANTYGQLGTGNKSNLLS--PAQIMVEKERV--------VEIAACHSAHTSAAKTQGGHV 307
Query: 367 HGWG 370
+ WG
Sbjct: 308 YMWG 311
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 128/265 (48%), Gaps = 29/265 (10%)
Query: 148 GQNQGSNFPRLFWGAFTPNTIICQVSCGS-VHVVALSECGLLQAWGYNEYGQLGRGITCE 206
G NQ + P+ I +S GS HV+ +E G++ AWG+N Y QLG G T +
Sbjct: 57 GDNQSTIVPKKL--ELLSGKKIKSLSYGSGPHVLLSTEDGIVYAWGHNGYSQLGNGTTNQ 114
Query: 207 GLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQ 266
G+ ++ ++++T+V+CG +HS A++++GEVY WG + GQ+G S
Sbjct: 115 GIAPIQICTNLM--------IKQVTEVACGSHHSMALADDGEVYAWGYNNCGQVGSGSTA 166
Query: 267 SGDKELLPRRVV-ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
+ + PR+V L + +ACG S A+ G +Y WG + GQLGLG
Sbjct: 167 N---QPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-- 221
Query: 326 LIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAAN-EKSTY 384
L P ++ +L + CG++HTL +G ++ WG N+YGQ KS
Sbjct: 222 LTPCRVAA-LHSVCVL-------QIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNL 273
Query: 385 AWYPSPVDWCVGEVRKLAAGGGHSA 409
SP V + R + HSA
Sbjct: 274 L---SPAQIMVEKERVVEIAACHSA 295
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 115/456 (25%), Positives = 178/456 (39%), Gaps = 79/456 (17%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG+N Q G G Q P Q+ C + ++ACG H+ A+A DG
Sbjct: 96 VYAWGHNGYSQLGN-GTTNQGIAPIQI------CTNLMIKQVTEVACGSHHSMALADDGE 148
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
++ WG N GQ+G G+ + P KV L + V SI+CG + A+ + E G
Sbjct: 149 VYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYG---- 204
Query: 142 SRLWVWGQN------QGSNFPRLFWGAFTP-------NTIICQVSCGSVHVVALSECGLL 188
WG N G+N +L TP + + Q+ CG H +AL++ GLL
Sbjct: 205 -----WGYNGNGQLGLGNNGNQL-----TPCRVAALHSVCVLQIVCGYAHTLALTDEGLL 254
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSEN 246
AWG N YGQLG G L +++ E E++ ++ +C H SAA ++
Sbjct: 255 YAWGANTYGQLGTGNKSNLLSPAQIM----------VEKERVVEIAACHSAHTSAAKTQG 304
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC-GGVHSCALTSKGALY 305
G VY W G C G LP + +C V +C T
Sbjct: 305 GHVYMW--------GQC---RGQSVTLPH---------LTHFSCTDDVFACFATPAVTWR 344
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFR-NIPILVVPNGVQLVACGHSHTLVYMRDG 364
L + + P +D FR + + V V + C H T+
Sbjct: 345 LLSVEHEDFLTVAESLKKEFDSPETADLKFRIDGKYIHVHKAVLKIRCEHFRTMFQSY-- 402
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL----AAGGGHSAVLADACSLKEL 420
W + ++ +Y+ Y + + + + L A G A LK+L
Sbjct: 403 ----WNEDMKEVIEIDQFSYSVYRAFLQYLYTDTVDLPPEDAIGLLDLATSYCENRLKKL 458
Query: 421 CEFRLAESVTLSNASEIEDVASRTGSEALARLCERL 456
C+ + +T+ NA + A R +E L C +
Sbjct: 459 CQHIIKRGITVENAFSLLSAAVRYDAEDLEEFCFKF 494
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 17/173 (9%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHSCALT 299
V+ + EV+ +G+ LG +GD + ++P+++ L G IK ++ G G H T
Sbjct: 37 VTHSDEVFVFGVNCSNCLG-----TGDNQSTIVPKKLELLSGKKIKSLSYGSGPHVLLST 91
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
G +YAWG + QLG G + + I ++ + V VACG H++
Sbjct: 92 EDGIVYAWGHNGYSQLGNGTTNQGIAPIQICTNLMIKQ---------VTEVACGSHHSMA 142
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
DG ++ WGYN+ GQ + + P V C+ R ++ G ++ +A
Sbjct: 143 LADDGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMA 195
Score = 38.9 bits (89), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 356 HTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV--DWCVGEVRKLAAGGGHSAVLAD 413
H L+ DG ++ WG+N Y Q N + P + + + +V ++A G HS LAD
Sbjct: 86 HVLLSTEDGIVYAWGHNGYSQLGNGTTNQGIAPIQICTNLMIKQVTEVACGSHHSMALAD 145
>gi|170050907|ref|XP_001861523.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167872400|gb|EDS35783.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 4784
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 175/402 (43%), Gaps = 99/402 (24%)
Query: 21 SAIYVWGYNHSGQTG-RKGRERQL----RIPKQLPP-----------------ELFGCPA 58
S + VWG N Q G KG + +L + QL P +L+ C
Sbjct: 2907 SKVLVWGLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHISGGSKSLFIVSQDGKLYACGE 2966
Query: 59 GANSRW------------------------LDIACGHEHTAAVASDGTLFTWGANEFGQL 94
G N R + + G +H A+ DG +F+WG E G+L
Sbjct: 2967 GTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKL 3026
Query: 95 GDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSN 154
G G + P+ ++ L+++ ++ I+CG+ +AAI S+ L+ WG +
Sbjct: 3027 GHGNRVTLEKPKLLESLRTKRIRDIACGSSHSAAIT---------SSGELYTWGLGE--- 3074
Query: 155 FPRLFWG----AFTPNTI-------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGR 201
+ RL G P + + QV+CGS + L+E GL+ +WG ++G+LGR
Sbjct: 3075 YGRLGHGDNCTQLKPKLVTALQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGR 3134
Query: 202 GITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG 261
G EG P ++ + Q+ CG S A+++ GEV+TWG G +LG
Sbjct: 3135 G-GSEGCSVPHQVERLNGV--------GVVQIECGAQFSLALTKIGEVWTWGKGDYYRLG 3185
Query: 262 HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQT 321
H + Q K P + L G + VA G +H A+T G ++AWG + GQ G G
Sbjct: 3186 HGTDQHVRK---PTPIQGLRGKKVIHVAVGALHCLAVTDSGQVFAWGDNDHGQQGSG--- 3239
Query: 322 RSFSLIPNESDTYFRNIPILVV-PNGVQL--VACGHSHTLVY 360
+T P LV+ +GV + VACG SH++ +
Sbjct: 3240 ----------NTVVNKKPNLVLGLDGVFVNRVACGSSHSVAW 3271
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 138/278 (49%), Gaps = 41/278 (14%)
Query: 51 PELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQ 110
P+L G + + C H A++S G +++WGA E G+LG G ++ P K+
Sbjct: 568 PKLVEGLEGVSVIQIAAHCEGRHAMALSSAGEVYSWGAGEGGRLGHGDTASKEVPTKIA- 626
Query: 111 LQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPN 166
L+ + V +I GA +AA++ S L+ WG+ + RL G F P
Sbjct: 627 LEKQ-VTAIYAGASYSAAVS---------SVGELFTWGRG---TYGRLGHGNSDDKFVPT 673
Query: 167 TI-------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGY 217
+ + V+ GS H +A+++ GLL AWG ++G+LG G +C G P I+G
Sbjct: 674 QVQALKAYKVVDVALGSGDAHSMAVTDGGLLFAWGDGDFGKLGNG-SCNGSPLPVQIEG- 731
Query: 218 AKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV 277
+ + ++ G S A+S +G +Y+WG G G+LGH + + + +P+ V
Sbjct: 732 ---------VSSVARIYSGSQFSVALSYDGTLYSWGKGHGGRLGHGNSEHSN---VPKLV 779
Query: 278 VALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
AL+G I DVA G H ALTS G LY WG + Q+
Sbjct: 780 HALEGKKIVDVAVGSAHCLALTSSGELYGWGRNDYQQI 817
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 146/336 (43%), Gaps = 56/336 (16%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S I+ WG+NH GQ G R +++P C A + R + IA G + AV D
Sbjct: 3944 STIFGWGHNHRGQLGGLDGSR-IKMPTP-------CEALSLLRPIQIAGGEQTLYAVTPD 3995
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDG 137
G L+ G G+LG G + P V+ LQ +K ++ G HC A +DG
Sbjct: 3996 GKLYATGYGAGGRLGIGGTDSVSTPTLVESLQHVIIKKVAVNSGGKHCLAL-----SSDG 4050
Query: 138 TISTSRLWVWGQNQGSNFPRLFWGAFT-PNTI-------ICQVSCGSVHVVALSECGLLQ 189
+ + WG+ + ++ P I + ++CGS H ++ G +
Sbjct: 4051 EV-----FSWGEGEDGKLGHGNRDSYDRPKLIEALSGIGVVDIACGSAHSACITSQGHVL 4105
Query: 190 AWGYNEYGQLGRGITCEGLQGPR------------VIKGYAKFLDEAP-------ELEK- 229
WG YG+LG G + + LQ R V A +E P ++E
Sbjct: 4106 TWGKGRYGRLGHGDSEDQLQPKRCVLRTTIMCGVGVTAIMASLAEEVPMGARSPMKIESL 4165
Query: 230 ----ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFI 285
+ +V CG S A++ +G VYTWG G +LGH + D P++V AL G I
Sbjct: 4166 AGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGN---TDHVRRPKKVAALQGKKI 4222
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQT 321
+A G +H A + G ++ WG + GQLG G T
Sbjct: 4223 ISIATGSLHCVACSDSGEVFTWGDNDEGQLGDGTVT 4258
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 128/285 (44%), Gaps = 54/285 (18%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G R+ R P+L +G +DIACG H+A + S G
Sbjct: 4052 VFSWGEGEDGKLGHGNRDSYDR------PKLIEALSGIGV--VDIACGSAHSACITSQGH 4103
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ TWG +G+LG G E + P++ +I CG TA +A E
Sbjct: 4104 VLTWGKGRYGRLGHGDSEDQLQPKRCV-----LRTTIMCGVGVTAIMASLAE-------- 4150
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYNE 195
+ GA +P I + +V CGS VAL+ G + WG +
Sbjct: 4151 --------------EVPMGARSPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGD 4196
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
Y +LG G T + ++ P+ + A + +KI ++ G H A S++GEV+TWG
Sbjct: 4197 YHRLGHGNT-DHVRRPKKVA--------ALQGKKIISIATGSLHCVACSDSGEVFTWGDN 4247
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
GQLG ++ + + PR V +L G I V CG H+ AL++
Sbjct: 4248 DEGQLGDGTVTAIQR---PRLVQSLQGKHIVKVICGSAHTLALST 4289
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 119/269 (44%), Gaps = 37/269 (13%)
Query: 156 PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIK 215
P+L G + I C H +ALS G + +WG E G+LG G T
Sbjct: 568 PKLVEGLEGVSVIQIAAHCEGRHAMALSSAGEVYSWGAGEGGRLGHGDTA---------- 617
Query: 216 GYAKFLDEAPELEK-ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLP 274
+K + LEK +T + G +SAAVS GE++TWG G+ G+LGH + D + +P
Sbjct: 618 --SKEVPTKIALEKQVTAIYAGASYSAAVSSVGELFTWGRGTYGRLGH---GNSDDKFVP 672
Query: 275 RRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESD 332
+V AL + DVA G HS A+T G L+AWG G+LG G S
Sbjct: 673 TQVQALKAYKVVDVALGSGDAHSMAVTDGGLLFAWGDGDFGKLGNGSCNGS--------- 723
Query: 333 TYFRNIPILVVPNGVQLVA---CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPS 389
P+ V GV VA G ++ DG ++ WG G+ + S ++ P
Sbjct: 724 ------PLPVQIEGVSSVARIYSGSQFSVALSYDGTLYSWGKGHGGRLGHGNSEHSNVPK 777
Query: 390 PVDWCVG-EVRKLAAGGGHSAVLADACSL 417
V G ++ +A G H L + L
Sbjct: 778 LVHALEGKKIVDVAVGSAHCLALTSSGEL 806
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 107/239 (44%), Gaps = 42/239 (17%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHE--HT 74
I + +Y WG G+ G QL+ P+L G R + +ACG T
Sbjct: 3061 ITSSGELYTWGLGEYGRLGHGDNCTQLK------PKLVTALQG--HRVVQVACGSRDAQT 3112
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
+ +G +F+WG +FG+LG G EG P +V++L V I CGA + A+ + E
Sbjct: 3113 LCLTEEGLVFSWGDGDFGKLGRGGSEGCSVPHQVERLNGVGVVQIECGAQFSLALTKIGE 3172
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALS 183
+W WG+ ++ RL G P I + V+ G++H +A++
Sbjct: 3173 ---------VWTWGKG---DYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVT 3220
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
+ G + AWG N++GQ G G T + P ++ G + +V+CG HS A
Sbjct: 3221 DSGQVFAWGDNDHGQQGSGNTVVN-KKPNLVLGLDGVF--------VNRVACGSSHSVA 3270
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 190 AWGYNEYGQLGRGITCEGLQGPRV-IKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG N+ QLG GL+G +V + Y+ L + K +S G VS++G+
Sbjct: 2911 VWGLNDKEQLG------GLKGSKVKLPTYSSVLSQL----KPIHISGGSKSLFIVSQDGK 2960
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHSCALTSKGALYA 306
+Y G G+ G+LG L + PR+V L+ +K VA GG H+ ALT G +++
Sbjct: 2961 LYACGEGTNGRLG---LGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFS 3017
Query: 307 WGGSQAGQLGLGPQT--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 364
WG + G+LG G + L+ + R+I ACG SH+ G
Sbjct: 3018 WGEGEDGKLGHGNRVTLEKPKLLESLRTKRIRDI------------ACGSSHSAAITSSG 3065
Query: 365 RIHGWGYNSYGQ 376
++ WG YG+
Sbjct: 3066 ELYTWGLGEYGR 3077
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 100/225 (44%), Gaps = 30/225 (13%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG+N GQLG GL G R+ EA L + Q++ GE AV+ +G++Y
Sbjct: 3949 WGHNHRGQLG------GLDGSRIKMPTPC---EALSLLRPIQIAGGEQTLYAVTPDGKLY 3999
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWG 308
G G+ G+ + D P V +L + IK VA GG H AL+S G +++WG
Sbjct: 4000 ATGYGAGGR---LGIGGTDSVSTPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWG 4056
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGRIH 367
+ G+LG G D+Y R I + GV +ACG +H+ G +
Sbjct: 4057 EGEDGKLGHG-----------NRDSYDRPKLIEALSGIGVVDIACGSAHSACITSQGHVL 4105
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
WG YG+ + S P CV + G G +A++A
Sbjct: 4106 TWGKGRYGRLGHGDSEDQLQPK---RCVLRT-TIMCGVGVTAIMA 4146
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 35/208 (16%)
Query: 214 IKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL 273
+ Y+ E P ++ QV+C E V+ +G++Y S+ S E +
Sbjct: 520 VPRYSTATIELPPSLQVRQVACTENSIYIVTTSGQLY-------------SIHSSCAETV 566
Query: 274 -PRRVVALDGIFIKDVA--CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNE 330
P+ V L+G+ + +A C G H+ AL+S G +Y+WG + G+LG G
Sbjct: 567 APKLVEGLEGVSVIQIAAHCEGRHAMALSSAGEVYSWGAGEGGRLGHG------------ 614
Query: 331 SDTYFRNIPI-LVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPS 389
DT + +P + + V + G S++ G + WG +YG+ + S + P+
Sbjct: 615 -DTASKEVPTKIALEKQVTAIYAGASYSAAVSSVGELFTWGRGTYGRLGHGNSDDKFVPT 673
Query: 390 PVD----WCVGEVRKLAAGGGHSAVLAD 413
V + V +V L +G HS + D
Sbjct: 674 QVQALKAYKVVDV-ALGSGDAHSMAVTD 700
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 8/109 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++Y WG + G G +R PK++ A + + IA G H A + G
Sbjct: 4188 SVYTWGKGDYHRLGH-GNTDHVRRPKKVA-------ALQGKKIISIATGSLHCVACSDSG 4239
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIA 130
+FTWG N+ GQLGDGT + P V+ LQ + + + CG+ T A++
Sbjct: 4240 EVFTWGDNDEGQLGDGTVTAIQRPRLVQSLQGKHIVKVICGSAHTLALS 4288
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 84/210 (40%), Gaps = 48/210 (22%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGC---------------PAGAN 61
I ++ + WG G+ G E QL+ + + C P GA
Sbjct: 4098 ITSQGHVLTWGKGRYGRLGHGDSEDQLQPKRCVLRTTIMCGVGVTAIMASLAEEVPMGAR 4157
Query: 62 SRW----------LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQL 111
S + + CG + + A+ G+++TWG ++ +LG G + + P+KV L
Sbjct: 4158 SPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAAL 4217
Query: 112 QSEFVKSISCGA-HCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFW 160
Q + + SI+ G+ HC A + G + T WG N PRL
Sbjct: 4218 QGKKIISIATGSLHCVAC-----SDSGEVFT-----WGDNDEGQLGDGTVTAIQRPRLVQ 4267
Query: 161 GAFTPNTIICQVSCGSVHVVALSECGLLQA 190
+ I +V CGS H +ALS L +A
Sbjct: 4268 SLQGKH--IVKVICGSAHTLALSTYQLSEA 4295
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 35/71 (49%)
Query: 63 RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG 122
+ + +A G H AV G +F WG N+ GQ G G K P V L FV ++CG
Sbjct: 3205 KVIHVAVGALHCLAVTDSGQVFAWGDNDHGQQGSGNTVVNKKPNLVLGLDGVFVNRVACG 3264
Query: 123 AHCTAAIAEPR 133
+ + A + P+
Sbjct: 3265 SSHSVAWSLPQ 3275
>gi|426233168|ref|XP_004010589.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Ovis aries]
Length = 4856
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 128/430 (29%), Positives = 195/430 (45%), Gaps = 70/430 (16%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
MD + T+RP D ++ K +Y+WG GQ GR + +P P
Sbjct: 3971 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMVPAAAP--------- 4019
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
+ S+ + CG T + ++GT+ G +G+LG G + + LQ V +
Sbjct: 4020 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQL 4079
Query: 120 --SCGAH-CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI---- 168
SCG+ + A+ E E ++ WG ++ +L G P I
Sbjct: 4080 VTSCGSDGHSMALTESGE---------VFSWGDG---DYGKLGHGNSDRQRRPRQIEALQ 4127
Query: 169 ---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV--IKGYAKFLDE 223
+ Q+SCG H ++ G L +G +YG+LG G T RV ++GY
Sbjct: 4128 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY------ 4181
Query: 224 APELEKITQVSCGEYHSAAVSENGE-VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG 282
+I QV+CG H+ AVS +G V+ +G G G+LG L + + P++V L G
Sbjct: 4182 -----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCG 4233
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL- 341
I IK VACG S ALT G +Y +G Q +GL P+ R+ + + IP+L
Sbjct: 4234 IGIKKVACGTQFSVALTKDGHVYTFG--QDRLIGL-PEGRA------RNHNRPQQIPVLA 4284
Query: 342 -VVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VR 399
VV ++ VA G HTL G ++ WG NS GQ + + P+ V G+ VR
Sbjct: 4285 GVV---IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVR 4341
Query: 400 KLAAGGGHSA 409
+++AG HSA
Sbjct: 4342 QISAGRCHSA 4351
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 176/405 (43%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ PK P + S I G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQ-PKLAP---------SFSDAQTIEAGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA----HCTAAIAEPRENDGT 138
+ G +G+LG G + +K+ +K +S H A E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE------- 476
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG + +P+L G ++C VS G H A++E G L
Sbjct: 477 ---GEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGEL 532
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G P ++K ++ + +VSCG H+ A+S++G
Sbjct: 533 YTWGEGDFGRLGHG-DSNSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 581
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ + AL G+FI+ V G S ALTS G +Y
Sbjct: 582 TVWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVY 636
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V ++ G SH L D
Sbjct: 637 AWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-ISIGDSHCLALSHDNE 685
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 143/307 (46%), Gaps = 43/307 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V SDG
Sbjct: 4098 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTSDGK 4149
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG++
Sbjct: 4150 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA----DGSM--- 4202
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNT------IIC-----QVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T + ++C +V+CG+ VAL++ G + +
Sbjct: 4203 -VWAFGDG---DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4258
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ I A + I V+ G H+ A++ G+VY
Sbjct: 4259 GQDRLIGLPEG-RARNHNRPQQIPVLAGVV--------IEDVAVGAEHTLALASTGDVYA 4309
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWGGS 310
WG S GQLG L + P V L G ++ ++ G HS A T+ A G S
Sbjct: 4310 WGSNSEGQLG---LGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVS 4366
Query: 311 QAGQLGL 317
QLGL
Sbjct: 4367 VPLQLGL 4373
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P I I +V GS +AL+ G + AW
Sbjct: 583 -VWSFG---GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I +S G+ H A+S + EVY
Sbjct: 639 GCG--ACLGCGSSEATALRPKLIEELAA--------TRIVDISIGDSHCLALSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDGI I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 30/228 (13%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +GQL G V+ A AP + QV CG+ + + NG V
Sbjct: 3997 WGAGRHGQLAEA-------GRNVMVPAA-----APSFSQAQQVICGQNCTFVIQANGTVL 4044
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGALYAW 307
G GS G+LG + S D +L + AL G + + +CG HS ALT G +++W
Sbjct: 4045 ACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSW 4101
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G R R I L VQ+ +CG H+ V DG++
Sbjct: 4102 GDGDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLF 4151
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
+G YG+ ++ P V G ++ ++A G H+ AV AD
Sbjct: 4152 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 4199
>gi|403263469|ref|XP_003924054.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
[Saimiri boliviensis boliviensis]
Length = 988
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 116/237 (48%), Gaps = 17/237 (7%)
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
VSCG H +A+ G + AWG GQLG G E PR I KI
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTLNGI--------KII 131
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
QVSCG YHS A+S++ +V++WG S GQLG + + P+RV +L+GI + VA G
Sbjct: 132 QVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG--KEFPSQPSPQRVRSLEGIPLAQVAAG 189
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVA 351
G HS AL+ G + WG + AGQL L + S +N+ GV ++
Sbjct: 190 GAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNL-------GVIYIS 242
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
CG HT V +DG++ +G NS GQ + P V+ G V ++ GG H+
Sbjct: 243 CGDEHTAVLSQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGGDHT 299
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 144/321 (44%), Gaps = 60/321 (18%)
Query: 21 SAIYVWGYNHSGQTGRKGRER-QLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
S ++ G N GQ GR+G R L P Q A ++ ++CG EH+ AV
Sbjct: 42 SLVHSCGENSRGQLGRRGAPRWDLPEPVQ---------ALKTLKFDLVSCGKEHSLAVCH 92
Query: 80 DGTLFTWGANEFGQLGDG-TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
G +F WGA GQLG G +E P K+ L + +SCG + + A+++
Sbjct: 93 KGRVFAWGAGSEGQLGVGELKEINFTPRKITTLNGIKIIQVSCGHYHSLALSK------- 145
Query: 139 ISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSEC 185
S+++ WG+N G FP +P + + QV+ G H ALS C
Sbjct: 146 --DSQVFSWGKNSHGQLGLGKEFP----SQPSPQRVRSLEGIPLAQVAAGGAHSFALSLC 199
Query: 186 GLLQAWGYNEYGQL---GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
G WG N GQL GR + + P I G K L + +SCG+ H+A
Sbjct: 200 GTSFGWGSNSAGQLALSGRNVQVQS-NKPLSI-GALKNLG-------VIYISCGDEHTAV 250
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
+S++G+V+T+G S GQLG+ ++ P+ V +DG+ + + CGG H+ A
Sbjct: 251 LSQDGKVFTFGDNSSGQLGY---SPTPEKRGPQLVERIDGL-VSQIDCGGDHTIA----- 301
Query: 303 ALYAWGGSQAGQLGLGPQTRS 323
Y Q G GP S
Sbjct: 302 --YVHTTGQVVSFGRGPSATS 320
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 140/332 (42%), Gaps = 45/332 (13%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
L A G H + ++ + + G N GQLG PE V+ L++ +SCG
Sbjct: 26 LQAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKTLKFDLVSCGKE 85
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSNF--PRLFWGAFTPNTI-------ICQVSCG 175
+ A+ R++ WG L FTP I I QVSCG
Sbjct: 86 HSLAVCH---------KGRVFAWGAGSEGQLGVGELKEINFTPRKITTLNGIKIIQVSCG 136
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
H +ALS+ + +WG N +GQLG G P+ ++ L+ P + QV+
Sbjct: 137 HYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRS----LEGIP----LAQVAA 188
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
G HS A+S G + WG S GQL + P + AL + + ++CG H+
Sbjct: 189 GGAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHT 248
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLVACG 353
L+ G ++ +G + +GQLG P T + P LV + V + CG
Sbjct: 249 AVLSQDGKVFTFGDNSSGQLGYSP-------------TPEKRGPQLVERIDGLVSQIDCG 295
Query: 354 HSHTLVYMR-DGRIHGWGYNSYGQAANEKSTY 384
HT+ Y+ G++ +G G +A K T+
Sbjct: 296 GDHTIAYVHTTGQVVSFG---RGPSATSKPTH 324
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 117/242 (48%), Gaps = 25/242 (10%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG GQ G G +++ + L G + + ++CGH H+ A++
Sbjct: 93 KGRVFAWGAGSEGQLG-VGELKEINFTPRKITTLNGI------KIIQVSCGHYHSLALSK 145
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISC-GAHCTA-AIAEPREND 136
D +F+WG N GQLG G E + P++V+ L+ + ++ GAH A ++
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW 205
Query: 137 GTISTSRLWVWGQN--QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
G+ S +L + G+N SN P L GA N + +SCG H LS+ G + +G N
Sbjct: 206 GSNSAGQLALSGRNVQVQSNKP-LSIGALK-NLGVIYISCGDEHTAVLSQDGKVFTFGDN 263
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEVYTWG 253
GQLG T E +GP++++ ++Q+ CG H+ A V G+V ++G
Sbjct: 264 SSGQLGYSPTPEK-RGPQLVERIDGL---------VSQIDCGGDHTIAYVHTTGQVVSFG 313
Query: 254 LG 255
G
Sbjct: 314 RG 315
>gi|307190185|gb|EFN74300.1| X-linked retinitis pigmentosa GTPase regulator [Camponotus
floridanus]
Length = 807
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 169/392 (43%), Gaps = 61/392 (15%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AH- 124
I CG EH+A + G LF +G+N++GQLG G + P VK L+ E V ++CG AH
Sbjct: 87 IECGDEHSAVICQSGRLFVFGSNDWGQLGLGHKNHISKPSCVKILKPEKVTHVACGRAHT 146
Query: 125 --CTAAIAEPRENDGTISTSRLWVWGQNQ-------------GSNFPRLFWGAFTPNTII 169
CT A +++ G NQ S+ P L + I
Sbjct: 147 LICTGA-------------QKIFACGSNQEGQLGRENSAIGDSSSSPILIYDCGLAGPRI 193
Query: 170 CQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK 229
Q++ GS H + L+ G + AWG N GQL GL G + G + P E
Sbjct: 194 VQIAAGSHHSMILTSDGGVVAWGSNLEGQL-------GLPG---VSGLVNKPTKVPIPEP 243
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG---HCSLQSGDKEL-LPRRVVALDGIFI 285
+ ++S G YHSA ++E+G VY G G+LG + S Q K++ LP +
Sbjct: 244 VKEISAGYYHSAFLTESGLVYVCGESESGKLGIDVNFSTQVAPKQMQLPTPAI------- 296
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
V CGG H+ L +Y G + +GQLG+G + + + RN I+
Sbjct: 297 -HVTCGGHHTLVLAENSNIYCSGSNASGQLGMGTNLNEIHMPKHLARGSLRNEKIV---- 351
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE--VRKLAA 403
+ACG SH+ + G++ G +G+ E++ + E + +A
Sbjct: 352 ---KIACGESHSAILTELGKLFTCGDGRHGKLGLEENENNVHEVTFAAKYQELFITNVAC 408
Query: 404 GGGHSAVLADACSLKELCEFRLAESVTLSNAS 435
GG H+ ++ + + ES T + +S
Sbjct: 409 GGCHTILVGRRHEMDSQSQSDSTESATQNKSS 440
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 127/283 (44%), Gaps = 34/283 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
I+ G N GQ GR+ + P ++ C A R + IA G H+ + SDG
Sbjct: 155 IFACGSNQEGQLGRENS--AIGDSSSSPILIYDC-GLAGPRIVQIAAGSHHSMILTSDGG 211
Query: 83 LFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+ WG+N GQLG G P KV E VK IS G + +A + E +
Sbjct: 212 VVAWGSNLEGQLGLPGVSGLVNKPTKVP--IPEPVKEISAGYYHSAFLTE---------S 260
Query: 142 SRLWVWGQNQGSNF--PRLFWGAFTPN-----TIICQVSCGSVHVVALSECGLLQAWGYN 194
++V G+++ F P T V+CG H + L+E + G N
Sbjct: 261 GLVYVCGESESGKLGIDVNFSTQVAPKQMQLPTPAIHVTCGGHHTLVLAENSNIYCSGSN 320
Query: 195 EYGQLGRGITCEGLQGPR-VIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
GQLG G + P+ + +G + EKI +++CGE HSA ++E G+++T G
Sbjct: 321 ASGQLGMGTNLNEIHMPKHLARGSLRN-------EKIVKIACGESHSAILTELGKLFTCG 373
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHS 295
G G+LG L+ + + A +FI +VACGG H+
Sbjct: 374 DGRHGKLG---LEENENNVHEVTFAAKYQELFITNVACGGCHT 413
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 129/344 (37%), Gaps = 76/344 (22%)
Query: 118 SISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSV 177
+ SC A T A+ TI SR + N S+F F + + CG
Sbjct: 50 ATSCAAQETGAVF-------TIGRSR---FADNVASHF-------FIRKDPVVAIECGDE 92
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H + + G L +G N++GQLG G + P +K EK+T V+CG
Sbjct: 93 HSAVICQSGRLFVFGSNDWGQLGLGHK-NHISKPSCVKILKP--------EKVTHVACGR 143
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV--ALDGIFIKDVACGGVHS 295
H+ + +++ G GQLG + GD P + L G I +A G HS
Sbjct: 144 AHTLICTGAQKIFACGSNQEGQLGRENSAIGDSSSSPILIYDCGLAGPRIVQIAAGSHHS 203
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNE----------SDTYFR--------- 336
LTS G + AWG + GQLGL P P + S Y+
Sbjct: 204 MILTSDGGVVAWGSNLEGQLGL-PGVSGLVNKPTKVPIPEPVKEISAGYYHSAFLTESGL 262
Query: 337 ----------------NIPILVVPNGVQL------VACGHSHTLVYMRDGRIHGWGYNSY 374
N V P +QL V CG HTLV + I+ G N+
Sbjct: 263 VYVCGESESGKLGIDVNFSTQVAPKQMQLPTPAIHVTCGGHHTLVLAENSNIYCSGSNAS 322
Query: 375 GQAANEKSTYAWYPSPVDWCVGEVR-----KLAAGGGHSAVLAD 413
GQ + + P G +R K+A G HSA+L +
Sbjct: 323 GQLGMGTNLNEIH-MPKHLARGSLRNEKIVKIACGESHSAILTE 365
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 90/203 (44%), Gaps = 44/203 (21%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG-----HCSLQSGDKELLPRRVVALDGIF 284
+ + CG+ HSA + ++G ++ +G GQLG H S S K L P +V
Sbjct: 84 VVAIECGDEHSAVICQSGRLFVFGSNDWGQLGLGHKNHISKPSCVKILKPEKVT------ 137
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV- 343
VACG H+ T ++A G +Q GQLG R S I + S + PIL+
Sbjct: 138 --HVACGRAHTLICTGAQKIFACGSNQEGQLG-----RENSAIGDSSSS-----PILIYD 185
Query: 344 -----PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ-------AANEKSTYAWYPSPV 391
P VQ+ A H H+++ DG + WG N GQ K T P P
Sbjct: 186 CGLAGPRIVQIAAGSH-HSMILTSDGGVVAWGSNLEGQLGLPGVSGLVNKPTKVPIPEP- 243
Query: 392 DWCVGEVRKLAAGGGHSAVLADA 414
V++++AG HSA L ++
Sbjct: 244 ------VKEISAGYYHSAFLTES 260
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 90/233 (38%), Gaps = 40/233 (17%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLP-PELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+ WG N GQ G G + P ++P PE +I+ G+ H+A + G
Sbjct: 212 VVAWGSNLEGQLGLPGVSGLVNKPTKVPIPEPVK----------EISAGYYHSAFLTESG 261
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
++ G +E G+LG + K QL + + ++CG H T +AE
Sbjct: 262 LVYVCGESESGKLGIDVNFSTQVAPKQMQLPTPAIH-VTCGGHHTLVLAE---------N 311
Query: 142 SRLWVWGQN------QGSNF-----PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
S ++ G N G+N P+ N I +++CG H L+E G L
Sbjct: 312 SNIYCSGSNASGQLGMGTNLNEIHMPKHLARGSLRNEKIVKIACGESHSAILTELGKLFT 371
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
G +G+LG + Y + IT V+CG H+ V
Sbjct: 372 CGDGRHGKLGLEENENNVHEVTFAAKYQELF--------ITNVACGGCHTILV 416
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 56/137 (40%), Gaps = 6/137 (4%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S IY G N SGQ G ++ +PK L N + + IACG H+A +
Sbjct: 312 SNIYCSGSNASGQLGMGTNLNEIHMPKHLARGSL-----RNEKIVKIACGESHSAILTEL 366
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEK-VKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
G LFT G G+LG E H + Q F+ +++CG T + E D
Sbjct: 367 GKLFTCGDGRHGKLGLEENENNVHEVTFAAKYQELFITNVACGGCHTILVGRRHEMDSQS 426
Query: 140 STSRLWVWGQNQGSNFP 156
+ QN+ S P
Sbjct: 427 QSDSTESATQNKSSLPP 443
>gi|145593744|ref|YP_001158041.1| cell wall anchor domain-containing protein [Salinispora tropica
CNB-440]
gi|145303081|gb|ABP53663.1| LPXTG-motif cell wall anchor domain [Salinispora tropica CNB-440]
Length = 577
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 160/426 (37%), Gaps = 73/426 (17%)
Query: 12 RPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGH 71
+P WG N GQ G P PAG + DIA G
Sbjct: 47 KPPTTAAVTDTALTWGQNDRGQLGNGTTTNSTD------PVEVSLPAG--TLLTDIAGGG 98
Query: 72 EHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
+H+ A+ S G+L WG N GQLGDGT P V V +I+ G + A+
Sbjct: 99 KHSLALTSTGSLLAWGNNANGQLGDGTTTSSNTPVAVDLPAGTEVVAIAAGNDHSLAL-- 156
Query: 132 PRENDGTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVH 178
ST + WG N G+N R TP T+ ++ GSVH
Sbjct: 157 -------TSTGAVLAWGDNSSGQLGDGTNDDR-----STPVTVDLPTTSTTTAIAAGSVH 204
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
++L+ G AWG N+ GQLG T + V +T ++ G
Sbjct: 205 SLSLTSTGSAFAWGNNDEGQLGDESTTSTNKPVNVALTTGT---------TLTAIAGGSA 255
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
HS ++ + WG S GQLG + L P V G + +A G +HS AL
Sbjct: 256 HSLGITSDNTAVAWGSNSQGQLGDG---TNTNALAPVNVALTTGTTVTAIAAGLLHSVAL 312
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQLVACG---H 354
+ G WG + GQLG G S N P+ V +P+G L A
Sbjct: 313 LTNGTAATWGNNATGQLGNGNNVTS-------------NTPVEVSLPSGTTLTAIAANSS 359
Query: 355 SHTLVYMRDGRIHGWGYNSYGQAANEKST--------YAWYPSPVDWCVG-EVRKLAAGG 405
+HT+ WG NS+GQ E +T + P V+ G + A G
Sbjct: 360 NHTVAITNTETALAWGDNSFGQLGTEVTTSGDVSIASSSNTPVAVNLSTGTTLTNTAVGT 419
Query: 406 GHSAVL 411
HS L
Sbjct: 420 NHSLAL 425
>gi|26327145|dbj|BAC27316.1| unnamed protein product [Mus musculus]
Length = 551
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 116/233 (49%), Gaps = 24/233 (10%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H+V + G + WG+N Y QLG G T GL + + +++ +V+CG
Sbjct: 110 HIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN--------KQVIEVACGS 161
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHSC 296
YHS ++ +GEV+ WG + GQ+G S + + +PRRV L + +++CG + S
Sbjct: 162 YHSLVLTSDGEVFAWGYNNSGQVGSGSTAN---QPIPRRVTGCLQNKVVMNISCGQMCSM 218
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G +Y WG + GQLGLG + + R VQ VACG++H
Sbjct: 219 AVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR----------VQRVACGYAH 268
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
TLV +G+I+ WG NSYGQ + YP+PV V + R + HSA
Sbjct: 269 TLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPV--VVEKDRIIEIAACHSA 319
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 135/298 (45%), Gaps = 39/298 (13%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F G N G LG G + P ++ L + + S+S G+ +A DG + T
Sbjct: 67 IFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLAT---TDGEVFT- 122
Query: 143 RLWVWGQNQGSNFPR---------LFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
WG N S N + +V+CGS H + L+ G + AWGY
Sbjct: 123 ----WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
N GQ+G G T PR + G + + + +SCG+ S AV + GEVY WG
Sbjct: 179 NNSGQVGSGSTANQ-PIPRRVTG-------CLQNKVVMNISCGQMCSMAVVDTGEVYVWG 230
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
GQLG L S + P RV AL GI ++ VACG H+ LT +G +YAWG + G
Sbjct: 231 YNGNGQLG---LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 287
Query: 314 QLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRIHGWG 370
QLG G N+S+ + ++ +++ AC +HT + G ++ WG
Sbjct: 288 QLGTG----------NKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 115/243 (47%), Gaps = 39/243 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G +P + L +N + +++ACG H+ + SDG
Sbjct: 120 VFTWGHNAYSQLG-NGTTNHGLVPCHISTNL------SNKQVIEVACGSYHSLVLTSDGE 172
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P +V LQ++ V +ISCG C+ A+ + T
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNISCGQMCSMAV---------VDT 223
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N N P A + +V+CG H + L++ G + AWG
Sbjct: 224 GEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGA 283
Query: 194 NEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G + + P V+ E ++I ++ +C H SAA ++ G VY
Sbjct: 284 NSYGQLGTGNKSNQSYPTPVVV-----------EKDRIIEIAACHSAHTSAAKTQGGHVY 332
Query: 251 TWG 253
WG
Sbjct: 333 MWG 335
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 18/133 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G Q P A R +ACG+ HT + +G
Sbjct: 226 VYVWGYNGNGQLGLGSSGNQ--------PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 277
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
++ WGAN +GQLG G + + +P V + ++ +C AH +AA +
Sbjct: 278 IYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQG--------- 328
Query: 142 SRLWVWGQNQGSN 154
+++WGQ +G +
Sbjct: 329 GHVYMWGQCRGQS 341
>gi|194227810|ref|XP_001917704.1| PREDICTED: LOW QUALITY PROTEIN: x-linked retinitis pigmentosa
GTPase regulator-like [Equus caballus]
Length = 915
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 165/357 (46%), Gaps = 42/357 (11%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ACG EHTA V + L+ +G+N +GQLG G+E P +K L+ E VK ++CG T
Sbjct: 40 LACGDEHTAVVTGNNKLYMFGSNNWGQLGLGSESPVSKPTCIKALKPEKVKFVACGRTHT 99
Query: 127 AAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
E + G S +L + + F R+ + FT I Q+S GS AL+E
Sbjct: 100 IVATEGGKVYATGGNSEGQLGLGDDEDRNTFHRIKF--FTSQHKIKQLSAGSSSSAALTE 157
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G L WG N GQ+G +V G + I+ VSCG YHSA ++
Sbjct: 158 DGELFMWGDNSEGQIGLKNIDNVCVPHQVTIG-----------KPISWVSCGYYHSAFIT 206
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL-DGIFIK--DVACGGVHSCALTSK 301
GE+YT+G G+LG S K L+ R+ L GI K VACGG H+ LT +
Sbjct: 207 TEGELYTFGEPESGKLGLPS-----KLLINHRIPQLVPGIPEKVIQVACGGGHTVVLT-E 260
Query: 302 GALYAWGGSQAGQLGLGP---QTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 358
A+Y +G Q GQLGLG +T ++I + D + ++CG +HT
Sbjct: 261 NAVYTFGLGQFGQLGLGTFIFETSEPTVIEHIKD------------QKISYISCGENHTA 308
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE---VRKLAAGGGHSAVLA 412
+ G I+ +G +G+ + P C V+ +A GG H V A
Sbjct: 309 LITDTGLIYTFGDGRHGKLGLGLENFTNQFVPTLCCSSRRFIVQLVACGGCHMLVFA 365
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 123/279 (44%), Gaps = 41/279 (14%)
Query: 144 LWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
++ +G+ + N P FW F + IC ++CG H ++ L +G N +GQLG G
Sbjct: 14 VFTFGKTRFAENIPSKFW--FKNDIPIC-LACGDEHTAVVTGNNKLYMFGSNNWGQLGLG 70
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
+ + P IK A + EK+ V+CG H+ +E G+VY G S GQLG
Sbjct: 71 -SESPVSKPTCIK--------ALKPEKVKFVACGRTHTIVATEGGKVYATGGNSEGQLGL 121
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
+ D+ R IK ++ G S ALT G L+ WG + GQ+GL
Sbjct: 122 GDDE--DRNTFHRIKFFTSQHKIKQLSAGSSSSAALTEDGELFMWGDNSEGQIGL----- 174
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQL------VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+NI + VP+ V + V+CG+ H+ +G ++ +G G+
Sbjct: 175 -------------KNIDNVCVPHQVTIGKPISWVSCGYYHSAFITTEGELYTFGEPESGK 221
Query: 377 AANEKSTYAWY--PSPVDWCVGEVRKLAAGGGHSAVLAD 413
+ P V +V ++A GGGH+ VL +
Sbjct: 222 LGLPSKLLINHRIPQLVPGIPEKVIQVACGGGHTVVLTE 260
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 40/196 (20%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+++WG N GQ G K + + +P Q+ G P W ++CG+ H+A + ++G
Sbjct: 161 LFMWGDNSEGQIGLKNID-NVCVPHQV---TIGKPIS----W--VSCGYYHSAFITTEGE 210
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQ---SEFVKSISCGAHCTAAIAEPRENDGTI 139
L+T+G E G+LG ++ H ++ QL E V ++CG T + E
Sbjct: 211 LYTFGEPESGKLGLPSKLLINH--RIPQLVPGIPEKVIQVACGGGHTVVLTE-------- 260
Query: 140 STSRLWVWGQNQGSNFPRLFWGAFT-----PNTI-------ICQVSCGSVHVVALSECGL 187
+ ++ +G Q F +L G F P I I +SCG H +++ GL
Sbjct: 261 --NAVYTFGLGQ---FGQLGLGTFIFETSEPTVIEHIKDQKISYISCGENHTALITDTGL 315
Query: 188 LQAWGYNEYGQLGRGI 203
+ +G +G+LG G+
Sbjct: 316 IYTFGDGRHGKLGLGL 331
>gi|301756863|ref|XP_002914279.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Ailuropoda melanoleuca]
Length = 4861
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 128/430 (29%), Positives = 195/430 (45%), Gaps = 70/430 (16%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
MD + T+RP D ++ K +Y+WG GQ GR + +P P
Sbjct: 3976 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMVPAAAP--------- 4024
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
+ S+ + CG T + ++GT+ G +G+LG G + + LQ V +
Sbjct: 4025 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQL 4084
Query: 120 --SCGAH-CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI---- 168
SCG+ + A+ E E ++ WG ++ +L G P I
Sbjct: 4085 VTSCGSDGHSMALTESGE---------VFSWGDG---DYGKLGHGNSDRQRRPRQIEALQ 4132
Query: 169 ---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV--IKGYAKFLDE 223
+ Q+SCG H ++ G L +G +YG+LG G T RV ++GY
Sbjct: 4133 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY------ 4186
Query: 224 APELEKITQVSCGEYHSAAVSENGE-VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG 282
+I QV+CG H+ AVS +G V+ +G G G+LG L + + P++V L G
Sbjct: 4187 -----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCG 4238
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL- 341
I IK VACG S ALT G +Y +G Q +GL P+ R+ + + IP+L
Sbjct: 4239 IGIKKVACGTQFSVALTKDGHVYTFG--QDRLIGL-PEGRA------RNHNRPQQIPVLA 4289
Query: 342 -VVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VR 399
VV ++ VA G HTL G ++ WG NS GQ + + P+ V G+ VR
Sbjct: 4290 GVV---IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVR 4346
Query: 400 KLAAGGGHSA 409
+++AG HSA
Sbjct: 4347 QISAGRCHSA 4356
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 182/405 (44%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ PK P + S I G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQ-PKLAP---------SFSDAQTIEAGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG----T 138
+ G +G+LG G + +K+L E +SI ++ + +DG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQS---TLKKLTFEPHRSIK-------KVSSSKGSDGHTLAF 473
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ ++ WG + +P+L G ++C VS G H A++E G L
Sbjct: 474 TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGEL 532
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G + P ++K ++ + +VSCG H+ A+S++G
Sbjct: 533 YTWGEGDFGRLGHGDS-NSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 581
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ V AL G+FI+ V G S ALTS G +Y
Sbjct: 582 TVWSFGGGDNGKLGH-----GDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVY 636
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V ++ G SH L D
Sbjct: 637 AWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-ISIGDSHCLALSHDNE 685
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 143/307 (46%), Gaps = 43/307 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V SDG
Sbjct: 4103 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTSDGK 4154
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG++
Sbjct: 4155 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA----DGSM--- 4207
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNT------IIC-----QVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T + ++C +V+CG+ VAL++ G + +
Sbjct: 4208 -VWAFGDG---DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4263
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ I A + I V+ G H+ A++ G+VY
Sbjct: 4264 GQDRLIGLPEG-RARNHNRPQQIPVLAGVV--------IEDVAVGAEHTLALASTGDVYA 4314
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWGGS 310
WG S GQLG L + P V L G ++ ++ G HS A T+ A G S
Sbjct: 4315 WGSNSEGQLG---LGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVS 4371
Query: 311 QAGQLGL 317
QLGL
Sbjct: 4372 VPLQLGL 4378
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P + I +V GS +AL+ G + AW
Sbjct: 583 -VWSFG---GGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I +S G+ H A+S + EVY
Sbjct: 639 GCG--ACLGCGSSEATALRPKLIEELAA--------TRIVDISIGDSHCLALSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDGI I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 30/228 (13%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +GQL G V+ A AP + QV CG+ + + NG V
Sbjct: 4002 WGAGRHGQLAEA-------GRNVMVPAA-----APSFSQAQQVICGQNCTFVIQANGTVL 4049
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGALYAW 307
G GS G+LG + S D +L + AL G + + +CG HS ALT G +++W
Sbjct: 4050 ACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSW 4106
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G R R I L VQ+ +CG H+ V DG++
Sbjct: 4107 GDGDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLF 4156
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
+G YG+ ++ P V G ++ ++A G H+ AV AD
Sbjct: 4157 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 4204
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VSE EVY WG S QL G +E + + +A + + G + +++ G
Sbjct: 368 VSETCEVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ A G G+LGLG +L + + R+I + G HTL +
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RSIKKVSSSKG------SDGHTLAFTT 475
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+G + WG YG+ + S+ YP + + G+V ++AG HSA + +
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
>gi|145345400|ref|XP_001417200.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577427|gb|ABO95493.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 418
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 170/381 (44%), Gaps = 65/381 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+A G H+ + + G +FT G N GQLG + +L E V S++ G T
Sbjct: 72 VAAGGAHSVFLVAGGHVFTCGLNADGQLGHSAGLPFSPEPMLVRLDVEVV-SVAAGNGHT 130
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNF---------PRLFWGAFTPNTIICQVSCGSV 177
+ + DG + W +G+N PR GA + QV+CG+
Sbjct: 131 LCV----DVDGCV-----WAFGKNTAGQLGTGNVDGTIPRKI-GALAKEARVAQVACGAE 180
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGI----------TCEGLQGPRVIKGYAKFLDEAPEL 227
H +A+++ G + +WG + G LG G T PR+++ E
Sbjct: 181 HSLAVADDGRVYSWGSSTDGVLGHGSETWNDGWFYRTARAELAPRLVRSL--------ED 232
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+K+ V+ G HSA + + G +YTWG G QLG S + D E P V++L F+ +
Sbjct: 233 KKVVAVAAGHMHSACIDDRGNLYTWGQGRFNQLG-LSAKPSDHETTPSPVMSLR--FVHE 289
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
+ACGG+HS A T+ G + +WG +Q G+LG G + S +P PI + G
Sbjct: 290 IACGGLHSLANTNAGVV-SWGANQHGELGHGHHSDIKSAVPK---------PIKMGSRGW 339
Query: 348 QLVACGHSHTLVYMRDGRIHGWGY-NSYGQAANEKSTYA-----------WYPSPVDWCV 395
+A G H+ + +G++ WG+ S G A+EK + W P V
Sbjct: 340 SKLAAGWKHS-AGIANGKLFAWGFGGSMGSYADEKMSSGGQLGLGNEFDFWEPHEVS-VP 397
Query: 396 GEVRKLAAGGGHSAVLADACS 416
GEV+ ++ G H+ L D S
Sbjct: 398 GEVKDVSCGFNHTLALVDTHS 418
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 145/308 (47%), Gaps = 63/308 (20%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ +G N +GQ G + + P G A +R +ACG EH+ AVA DG
Sbjct: 139 VWAFGKNTAGQLGTGNVDGTI-------PRKIGALA-KEARVAQVACGAEHSLAVADDGR 190
Query: 83 LFTWGANEFGQLGDGTE-----------EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
+++WG++ G LG G+E P V+ L+ + V +++ G H +A +
Sbjct: 191 VYSWGSSTDGVLGHGSETWNDGWFYRTARAELAPRLVRSLEDKKVVAVAAG-HMHSACID 249
Query: 132 PRENDGTISTSRLWVWGQNQGSNFPRLFWGA------FTPNTIIC-----QVSCGSVHVV 180
R N L+ WGQ + F +L A TP+ ++ +++CG +H +
Sbjct: 250 DRGN--------LYTWGQGR---FNQLGLSAKPSDHETTPSPVMSLRFVHEIACGGLHSL 298
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQG-PRVIKGYAKFLDEAPELEKITQVSCGEYH 239
A + G++ +WG N++G+LG G + P+ IK ++ ++++ G H
Sbjct: 299 ANTNAGVV-SWGANQHGELGHGHHSDIKSAVPKPIKMGSR---------GWSKLAAGWKH 348
Query: 240 SAAVSENGEVYTWGL-GSVGQLGHCSLQSGDK-------ELLPRRVVALDGIFIKDVACG 291
SA ++ NG+++ WG GS+G + SG + + V++ G +KDV+CG
Sbjct: 349 SAGIA-NGKLFAWGFGGSMGSYADEKMSSGGQLGLGNEFDFWEPHEVSVPGE-VKDVSCG 406
Query: 292 GVHSCALT 299
H+ AL
Sbjct: 407 FNHTLALV 414
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 156/393 (39%), Gaps = 77/393 (19%)
Query: 1 MDINEIIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA 60
+D+ + A V + A ++ G N GQ G +P P L
Sbjct: 67 LDVRAVAAGGAHSV-FLVAGGHVFTCGLNADGQLGHSAG-----LPFSPEPMLVRL---- 116
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF-VKSI 119
+ + +A G+ HT V DG ++ +G N GQLG G +G P K+ L E V +
Sbjct: 117 DVEVVSVAAGNGHTLCVDVDGCVWAFGKNTAGQLGTGNVDGTI-PRKIGALAKEARVAQV 175
Query: 120 SCGAHCTAAIAEPRENDGTISTSRLWVWGQN------QGSN------FPRLFWGAFTPNT 167
+CGA + A+A+ DG R++ WG + GS F R P
Sbjct: 176 ACGAEHSLAVAD----DG-----RVYSWGSSTDGVLGHGSETWNDGWFYRTARAELAPRL 226
Query: 168 I-------ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF 220
+ + V+ G +H + + G L WG + QLG +
Sbjct: 227 VRSLEDKKVVAVAAGHMHSACIDDRGNLYTWGQGRFNQLGLSAKP---------SDHETT 277
Query: 221 LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL 280
L + +++CG HS A + N V +WG G+LGH S K +P+ +
Sbjct: 278 PSPVMSLRFVHEIACGGLHSLA-NTNAGVVSWGANQHGELGHGH-HSDIKSAVPKPIKMG 335
Query: 281 DGIFIKDVACGGVHSCALTSKGALYAWG------------GSQAGQLGLGPQTRSFSLIP 328
+ K +A G HS + + G L+AWG S GQLGLG
Sbjct: 336 SRGWSK-LAAGWKHSAGI-ANGKLFAWGFGGSMGSYADEKMSSGGQLGLG---------- 383
Query: 329 NESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
NE D F + VP V+ V+CG +HTL +
Sbjct: 384 NEFD--FWEPHEVSVPGEVKDVSCGFNHTLALV 414
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 93/200 (46%), Gaps = 20/200 (10%)
Query: 192 GYNEYGQLGRGITCEGLQG--PRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
G ++G+LG G E G PR Y ++ +L+ + V+ G HS + G V
Sbjct: 31 GNGDHGRLGHGSPDEAHDGWSPRS-SNYFHPVEGVSDLD-VRAVAAGGAHSVFLVAGGHV 88
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
+T GL + GQLGH + E + +V LD + + VA G H+ + G ++A+G
Sbjct: 89 FTCGLNADGQLGHSAGLPFSPEPM---LVRLD-VEVVSVAAGNGHTLCVDVDGCVWAFGK 144
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGW 369
+ AGQLG G N T R I L V VACG H+L DGR++ W
Sbjct: 145 NTAGQLGTG----------NVDGTIPRKIGALAKEARVAQVACGAEHSLAVADDGRVYSW 194
Query: 370 GYNSYGQAANEKSTY--AWY 387
G ++ G + T+ W+
Sbjct: 195 GSSTDGVLGHGSETWNDGWF 214
>gi|281349737|gb|EFB25321.1| hypothetical protein PANDA_007753 [Ailuropoda melanoleuca]
Length = 527
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 116/233 (49%), Gaps = 24/233 (10%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H+V + G + WG+N Y QLG G T GL + + +++T+V+CG
Sbjct: 86 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN--------KQVTEVACGS 137
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHSC 296
YHS ++ +GEV+ WG + GQ+G S + +PRRV L ++ACG + S
Sbjct: 138 YHSLVLTSDGEVFAWGYNNSGQVGS---GSTANQPIPRRVTGCLQNKVAVNIACGQMCSM 194
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ + G +Y WG + GQLGLG + + R VQ VACG++H
Sbjct: 195 AVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR----------VQRVACGYAH 244
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
TLV +G+++ WG NSYGQ + YP+PV V + R + HSA
Sbjct: 245 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPV--IVEKDRIIEIAACHSA 295
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 131/300 (43%), Gaps = 43/300 (14%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTAAIAEPRENDGTIS 140
+F G N G LG G + P ++ L + + +S G+ H A E
Sbjct: 43 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTE--------- 93
Query: 141 TSRLWVWGQNQGSNFPR---------LFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
++ WG N S N + +V+CGS H + L+ G + AW
Sbjct: 94 -GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAW 152
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
GYN GQ+G G T PR + G + + ++CG+ S AV GEVY
Sbjct: 153 GYNNSGQVGSGSTANQ-PIPRRVTG-------CLQNKVAVNIACGQMCSMAVVNTGEVYV 204
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG GQLG L S + P R+ AL GI ++ VACG H+ LT +G +YAWG +
Sbjct: 205 WGYNGNGQLG---LGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 261
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRIHGWG 370
GQLG G N+S+ + I+ +++ AC +HT + G ++ WG
Sbjct: 262 YGQLGTG----------NKSNQSYPAPVIVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 114/243 (46%), Gaps = 39/243 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G +P + L +N + ++ACG H+ + SDG
Sbjct: 96 VFTWGHNAYSQLG-NGTTNHGLVPCHISTNL------SNKQVTEVACGSYHSLVLTSDGE 148
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P +V LQ++ +I+CG C+ A+ ++T
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVAVNIACGQMCSMAV---------VNT 199
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N N P A + +V+CG H + L++ G + AWG
Sbjct: 200 GEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 259
Query: 194 NEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G + + P ++ E ++I ++ +C H SAA ++ G VY
Sbjct: 260 NSYGQLGTGNKSNQSYPAPVIV-----------EKDRIIEIAACHSAHTSAAKTQGGHVY 308
Query: 251 TWG 253
WG
Sbjct: 309 MWG 311
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 20/151 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G Q P A R +ACG+ HT + +G
Sbjct: 202 VYVWGYNGNGQLGLGSSGNQ--------PTPCRIAALQGIRVQRVACGYAHTLVLTDEGQ 253
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
++ WGAN +GQLG G + + +P V + ++ +C AH +AA +
Sbjct: 254 VYAWGANSYGQLGTGNKSNQSYPAPVIVEKDRIIEIAACHSAHTSAAKTQG--------- 304
Query: 142 SRLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 305 GHVYMWGQCRGQSVVLPHLTHFSCTDDVFAC 335
>gi|281347310|gb|EFB22894.1| hypothetical protein PANDA_002155 [Ailuropoda melanoleuca]
Length = 4871
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 128/430 (29%), Positives = 195/430 (45%), Gaps = 70/430 (16%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
MD + T+RP D ++ K +Y+WG GQ GR + +P P
Sbjct: 3985 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMVPAAAP--------- 4033
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
+ S+ + CG T + ++GT+ G +G+LG G + + LQ V +
Sbjct: 4034 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQL 4093
Query: 120 --SCGAH-CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI---- 168
SCG+ + A+ E E ++ WG ++ +L G P I
Sbjct: 4094 VTSCGSDGHSMALTESGE---------VFSWGDG---DYGKLGHGNSDRQRRPRQIEALQ 4141
Query: 169 ---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV--IKGYAKFLDE 223
+ Q+SCG H ++ G L +G +YG+LG G T RV ++GY
Sbjct: 4142 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY------ 4195
Query: 224 APELEKITQVSCGEYHSAAVSENGE-VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG 282
+I QV+CG H+ AVS +G V+ +G G G+LG L + + P++V L G
Sbjct: 4196 -----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCG 4247
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL- 341
I IK VACG S ALT G +Y +G Q +GL P+ R+ + + IP+L
Sbjct: 4248 IGIKKVACGTQFSVALTKDGHVYTFG--QDRLIGL-PEGRA------RNHNRPQQIPVLA 4298
Query: 342 -VVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VR 399
VV ++ VA G HTL G ++ WG NS GQ + + P+ V G+ VR
Sbjct: 4299 GVV---IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVR 4355
Query: 400 KLAAGGGHSA 409
+++AG HSA
Sbjct: 4356 QISAGRCHSA 4365
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 186/405 (45%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ P+L P+ ++++ I G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQ------PKL--APSFSDAQ--TIEAGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG----T 138
+ G +G+LG G + +K+L E +SI ++ + +DG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQS---TLKKLTFEPHRSIK-------KVSSSKGSDGHTLAF 473
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ ++ WG + +P+L G ++C VS G H A++E G L
Sbjct: 474 TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGEL 532
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G + P ++K ++ + +VSCG H+ A+S++G
Sbjct: 533 YTWGEGDFGRLGHGDS-NSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 581
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ V AL G+FI+ V G S ALTS G +Y
Sbjct: 582 TVWSFGGGDNGKLGH-----GDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVY 636
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V ++ G SH L D
Sbjct: 637 AWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-ISIGDSHCLALSHDNE 685
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 143/307 (46%), Gaps = 43/307 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V SDG
Sbjct: 4112 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTSDGK 4163
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG++
Sbjct: 4164 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA----DGSM--- 4216
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNT------IIC-----QVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T + ++C +V+CG+ VAL++ G + +
Sbjct: 4217 -VWAFGDG---DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4272
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ I A + I V+ G H+ A++ G+VY
Sbjct: 4273 GQDRLIGLPEG-RARNHNRPQQIPVLAGVV--------IEDVAVGAEHTLALASTGDVYA 4323
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWGGS 310
WG S GQLG L + P V L G ++ ++ G HS A T+ A G S
Sbjct: 4324 WGSNSEGQLG---LGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVS 4380
Query: 311 QAGQLGL 317
QLGL
Sbjct: 4381 VPLQLGL 4387
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P + I +V GS +AL+ G + AW
Sbjct: 583 -VWSFG---GGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I +S G+ H A+S + EVY
Sbjct: 639 GCG--ACLGCGSSEATALRPKLIEELAA--------TRIVDISIGDSHCLALSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDGI I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 30/228 (13%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +GQL G V+ A AP + QV CG+ + + NG V
Sbjct: 4011 WGAGRHGQLAEA-------GRNVMVPAA-----APSFSQAQQVICGQNCTFVIQANGTVL 4058
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGALYAW 307
G GS G+LG + S D +L + AL G + + +CG HS ALT G +++W
Sbjct: 4059 ACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSW 4115
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G R R I L VQ+ +CG H+ V DG++
Sbjct: 4116 GDGDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLF 4165
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
+G YG+ ++ P V G ++ ++A G H+ AV AD
Sbjct: 4166 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 4213
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VSE EVY WG S QL G +E + + +A + + G + +++ G
Sbjct: 368 VSETCEVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ A G G+LGLG +L + + R+I + G HTL +
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RSIKKVSSSKG------SDGHTLAFTT 475
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+G + WG YG+ + S+ YP + + G+V ++AG HSA + +
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
>gi|384939244|gb|AFI33227.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
mulatta]
Length = 1020
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 122/238 (51%), Gaps = 19/238 (7%)
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
VSCG H +A+ G + AWG GQLG G E P+ I KI
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGI--------KII 131
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
QVSCG YHS A+S++ +V++WG S GQLG + + P+RV +L+GI + VA G
Sbjct: 132 QVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG--KEVPSQASPQRVRSLEGIPLAQVAAG 189
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN-GVQLV 350
G HS AL+ G + WG + AGQL L + +P +S+ + + I + N GV +
Sbjct: 190 GAHSFALSLCGTSFGWGSNSAGQLALSGRN-----VPVQSN---KPLSIGALKNLGVIYI 241
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
+CG HT V ++DG++ +G NS GQ + P V+ G V ++ G H+
Sbjct: 242 SCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHT 299
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 145/333 (43%), Gaps = 53/333 (15%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
L A G H+ + ++ + + G N GQLG + PE ++ L++ V +SCG
Sbjct: 26 LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKE 85
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQ-NQGS----NFPRLFWGAFTPNTI-------ICQV 172
+ A+ R++ WG ++G F + +FTP I I QV
Sbjct: 86 HSLAVCH---------KGRVFAWGAGSEGQLGIGEFKEI---SFTPKKITTLNGIKIIQV 133
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
SCG H +ALS+ + +WG N +GQLG G P+ ++ L+ P + Q
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRS----LEGIP----LAQ 185
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
V+ G HS A+S G + WG S GQL + P + AL + + ++CG
Sbjct: 186 VAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGD 245
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLV 350
H+ L G ++ +G + +GQLG P T + P LV + V +
Sbjct: 246 EHTAVLIQDGKVFTFGDNSSGQLGYSP-------------TPEKRGPQLVERIDGLVSQI 292
Query: 351 ACGHSHTLVYMRDGRIHGWG-YNSYGQAANEKS 382
CG HTL Y +H G S+G ++KS
Sbjct: 293 DCGSYHTLAY-----VHTTGQVISFGHGPSDKS 320
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 138/314 (43%), Gaps = 58/314 (18%)
Query: 27 GYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTW 86
G N GQ GR+ R P+ PE N ++CG EH+ AV G +F W
Sbjct: 48 GDNSRGQLGRR------RAPRGELPEPIQALETLNVDL--VSCGKEHSLAVCHKGRVFAW 99
Query: 87 GANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLW 145
GA GQLG G +E P+K+ L + +SCG + + A+++ S+++
Sbjct: 100 GAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK---------DSQVF 150
Query: 146 VWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWG 192
WG+N G P +P + + QV+ G H ALS CG WG
Sbjct: 151 SWGKNSHGQLGLGKEVP----SQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWG 206
Query: 193 YNEYGQL---GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
N GQL GR + + P I G K L + +SCG+ H+A + ++G+V
Sbjct: 207 SNSAGQLALSGRNVPVQS-NKPLSI-GALKNLG-------VIYISCGDEHTAVLIQDGKV 257
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
+T+G S GQLG+ ++ P+ V +DG+ + + CG H+ A Y
Sbjct: 258 FTFGDNSSGQLGY---SPTPEKRGPQLVERIDGL-VSQIDCGSYHTLA-------YVHTT 306
Query: 310 SQAGQLGLGPQTRS 323
Q G GP +S
Sbjct: 307 GQVISFGHGPSDKS 320
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 117/242 (48%), Gaps = 25/242 (10%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG GQ G G +++ + L G + + ++CGH H+ A++
Sbjct: 93 KGRVFAWGAGSEGQLG-IGEFKEISFTPKKITTLNGI------KIIQVSCGHYHSLALSK 145
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISC-GAHCTA-AIAEPREND 136
D +F+WG N GQLG G E + P++V+ L+ + ++ GAH A ++
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW 205
Query: 137 GTISTSRLWVWGQN--QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
G+ S +L + G+N SN P L GA N + +SCG H L + G + +G N
Sbjct: 206 GSNSAGQLALSGRNVPVQSNKP-LSIGALK-NLGVIYISCGDEHTAVLIQDGKVFTFGDN 263
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEVYTWG 253
GQLG T E +GP++++ ++Q+ CG YH+ A V G+V ++G
Sbjct: 264 SSGQLGYSPTPEK-RGPQLVERIDGL---------VSQIDCGSYHTLAYVHTTGQVISFG 313
Query: 254 LG 255
G
Sbjct: 314 HG 315
>gi|355749434|gb|EHH53833.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca fascicularis]
Length = 1020
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 122/238 (51%), Gaps = 19/238 (7%)
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
VSCG H +A+ G + AWG GQLG G E P+ I KI
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGI--------KII 131
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
QVSCG YHS A+S++ +V++WG S GQLG + + P+RV +L+GI + VA G
Sbjct: 132 QVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG--KEVPSQASPQRVRSLEGIPLAQVAAG 189
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN-GVQLV 350
G HS AL+ G + WG + AGQL L + +P +S+ + + I + N GV +
Sbjct: 190 GAHSFALSLCGTSFGWGSNSAGQLALSGRN-----VPVQSN---KPLSIGALKNLGVIYI 241
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
+CG HT V ++DG++ +G NS GQ + P V+ G V ++ G H+
Sbjct: 242 SCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHT 299
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 142/322 (44%), Gaps = 48/322 (14%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
L A G H+ + ++ + + G N GQLG + PE ++ L++ V +SCG
Sbjct: 26 LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKE 85
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQ-NQGS----NFPRLFWGAFTPNTI-------ICQV 172
+ A+ R++ WG ++G F + +FTP I I QV
Sbjct: 86 HSLAVCH---------KGRVFAWGAGSEGQLGIGEFKEI---SFTPKKITTLNGIKIIQV 133
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
SCG H +ALS+ + +WG N +GQLG G P+ ++ L+ P + Q
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRS----LEGIP----LAQ 185
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
V+ G HS A+S G + WG S GQL + P + AL + + ++CG
Sbjct: 186 VAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGD 245
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLV 350
H+ L G ++ +G + +GQLG P T + P LV + V +
Sbjct: 246 EHTAVLIQDGKVFTFGDNSSGQLGYSP-------------TPEKRGPQLVERIDGLVSQI 292
Query: 351 ACGHSHTLVYMR-DGRIHGWGY 371
CG HTL Y+ G++ +G+
Sbjct: 293 DCGSYHTLAYVHTTGQVISFGH 314
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 137/314 (43%), Gaps = 58/314 (18%)
Query: 27 GYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTW 86
G N GQ GR+ R P+ PE N ++CG EH+ AV G +F W
Sbjct: 48 GDNSRGQLGRR------RAPRGELPEPIQALETLNVDL--VSCGKEHSLAVCHKGRVFAW 99
Query: 87 GANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLW 145
GA GQLG G +E P+K+ L + +SCG + + A+++ S+++
Sbjct: 100 GAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK---------DSQVF 150
Query: 146 VWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWG 192
WG+N G P +P + + QV+ G H ALS CG WG
Sbjct: 151 SWGKNSHGQLGLGKEVP----SQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWG 206
Query: 193 YNEYGQL---GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
N GQL GR + + P I G K L + +SCG+ H+A + ++G+V
Sbjct: 207 SNSAGQLALSGRNVPVQS-NKPLSI-GALKNLG-------VIYISCGDEHTAVLIQDGKV 257
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
+T+G S GQLG+ ++ P+ V +DG+ + + CG H+ A Y
Sbjct: 258 FTFGDNSSGQLGY---SPTPEKRGPQLVERIDGL-VSQIDCGSYHTLA-------YVHTT 306
Query: 310 SQAGQLGLGPQTRS 323
Q G GP S
Sbjct: 307 GQVISFGHGPSDTS 320
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 117/242 (48%), Gaps = 25/242 (10%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG GQ G G +++ + L G + + ++CGH H+ A++
Sbjct: 93 KGRVFAWGAGSEGQLG-IGEFKEISFTPKKITTLNGI------KIIQVSCGHYHSLALSK 145
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISC-GAHCTA-AIAEPREND 136
D +F+WG N GQLG G E + P++V+ L+ + ++ GAH A ++
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW 205
Query: 137 GTISTSRLWVWGQN--QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
G+ S +L + G+N SN P L GA N + +SCG H L + G + +G N
Sbjct: 206 GSNSAGQLALSGRNVPVQSNKP-LSIGALK-NLGVIYISCGDEHTAVLIQDGKVFTFGDN 263
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEVYTWG 253
GQLG T E +GP++++ ++Q+ CG YH+ A V G+V ++G
Sbjct: 264 SSGQLGYSPTPEK-RGPQLVERIDGL---------VSQIDCGSYHTLAYVHTTGQVISFG 313
Query: 254 LG 255
G
Sbjct: 314 HG 315
>gi|355569557|gb|EHH25458.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca mulatta]
Length = 1020
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 122/238 (51%), Gaps = 19/238 (7%)
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
VSCG H +A+ G + AWG GQLG G E P+ I KI
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGI--------KII 131
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
QVSCG YHS A+S++ +V++WG S GQLG + + P+RV +L+GI + VA G
Sbjct: 132 QVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG--KEVPSQASPQRVRSLEGIPLAQVAAG 189
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN-GVQLV 350
G HS AL+ G + WG + AGQL L + +P +S+ + + I + N GV +
Sbjct: 190 GAHSFALSLCGTSFGWGSNSAGQLALSGRN-----VPVQSN---KPLSIGALKNLGVIYI 241
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
+CG HT V ++DG++ +G NS GQ + P V+ G V ++ G H+
Sbjct: 242 SCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHT 299
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 145/333 (43%), Gaps = 53/333 (15%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
L A G H+ + ++ + + G N GQLG + PE ++ L++ V +SCG
Sbjct: 26 LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKE 85
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQ-NQGS----NFPRLFWGAFTPNTI-------ICQV 172
+ A+ R++ WG ++G F + +FTP I I QV
Sbjct: 86 HSLAVCH---------KGRVFAWGAGSEGQLGIGEFKEI---SFTPKKITTLNGIKIIQV 133
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
SCG H +ALS+ + +WG N +GQLG G P+ ++ L+ P + Q
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRS----LEGIP----LAQ 185
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
V+ G HS A+S G + WG S GQL + P + AL + + ++CG
Sbjct: 186 VAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGD 245
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLV 350
H+ L G ++ +G + +GQLG P T + P LV + V +
Sbjct: 246 EHTAVLIQDGKVFTFGDNSSGQLGYSP-------------TPEKRGPQLVERIDGLVSQI 292
Query: 351 ACGHSHTLVYMRDGRIHGWG-YNSYGQAANEKS 382
CG HTL Y +H G S+G ++KS
Sbjct: 293 DCGSYHTLAY-----VHTTGQVISFGHGPSDKS 320
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 138/314 (43%), Gaps = 58/314 (18%)
Query: 27 GYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTW 86
G N GQ GR+ R P+ PE N ++CG EH+ AV G +F W
Sbjct: 48 GDNSRGQLGRR------RAPRGELPEPIQALETLNVDL--VSCGKEHSLAVCHKGRVFAW 99
Query: 87 GANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLW 145
GA GQLG G +E P+K+ L + +SCG + + A+++ S+++
Sbjct: 100 GAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK---------DSQVF 150
Query: 146 VWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWG 192
WG+N G P +P + + QV+ G H ALS CG WG
Sbjct: 151 SWGKNSHGQLGLGKEVP----SQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWG 206
Query: 193 YNEYGQL---GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
N GQL GR + + P I G K L + +SCG+ H+A + ++G+V
Sbjct: 207 SNSAGQLALSGRNVPVQS-NKPLSI-GALKNLG-------VIYISCGDEHTAVLIQDGKV 257
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
+T+G S GQLG+ ++ P+ V +DG+ + + CG H+ A Y
Sbjct: 258 FTFGDNSSGQLGY---SPTPEKRGPQLVERIDGL-VSQIDCGSYHTLA-------YVHTT 306
Query: 310 SQAGQLGLGPQTRS 323
Q G GP +S
Sbjct: 307 GQVISFGHGPSDKS 320
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 117/242 (48%), Gaps = 25/242 (10%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG GQ G G +++ + L G + + ++CGH H+ A++
Sbjct: 93 KGRVFAWGAGSEGQLG-IGEFKEISFTPKKITTLNGI------KIIQVSCGHYHSLALSK 145
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISC-GAHCTA-AIAEPREND 136
D +F+WG N GQLG G E + P++V+ L+ + ++ GAH A ++
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW 205
Query: 137 GTISTSRLWVWGQN--QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
G+ S +L + G+N SN P L GA N + +SCG H L + G + +G N
Sbjct: 206 GSNSAGQLALSGRNVPVQSNKP-LSIGALK-NLGVIYISCGDEHTAVLIQDGKVFTFGDN 263
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEVYTWG 253
GQLG T E +GP++++ ++Q+ CG YH+ A V G+V ++G
Sbjct: 264 SSGQLGYSPTPEK-RGPQLVERIDGL---------VSQIDCGSYHTLAYVHTTGQVISFG 313
Query: 254 LG 255
G
Sbjct: 314 HG 315
>gi|342873514|gb|EGU75680.1| hypothetical protein FOXB_13829 [Fusarium oxysporum Fo5176]
Length = 583
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 111/430 (25%), Positives = 178/430 (41%), Gaps = 52/430 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLP-PELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+YV+G SG+ G + + P + P L + AN + I+CG H A+ D
Sbjct: 148 VYVFGEGSSGELGLGSKRVNNKKPIDVKRPRLNDNLSAANIGVVQISCGGMHAVALTHDN 207
Query: 82 TLFTWGANEFGQLGDGT--EEGRKHPEK-------------VKQLQSEFV----KSISCG 122
+ TWG N+ G LG T + G + +K + ++S + + G
Sbjct: 208 KILTWGVNDQGALGRDTNWDGGLRDMDKSEDSDSEDEDDTGINPMESTPTAVSDEHFAPG 267
Query: 123 AHCTAAIAEPRENDGTISTSRLWVWGQNQGSN----FPRLFWGAFTPNTI-----ICQVS 173
+A + R++ WG + S+ F TP I I ++
Sbjct: 268 TKFVQVVASDSASFALTEDGRVYGWGTFRSSDGILGFSETIKVQSTPLMIRDLKNIKALA 327
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
GS H++AL G + AWG + QLGR I + +G P KI ++
Sbjct: 328 AGSNHILALDHKGNVVAWGCGQQNQLGRRIIERNKMSSLIPQGVG-----LPR-GKIAKI 381
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACG 291
+CG YHS A+ ++G+VY WGL + G++G S D ++ P ++ LD I ++ G
Sbjct: 382 ACGSYHSFAIDKSGQVYGWGLNNFGEIGVESNAGEDDAVILRPAKLTYLDDYNITEIDGG 441
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFR--NIPILVVP----- 344
HS A + KG L WG Q+G F + ++ Y N IL P
Sbjct: 442 EHHSLACSDKGDLLTWGRVDGYQVGF-----EFDKLSEDNTIYDERGNARILFKPTIQPD 496
Query: 345 -NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL-- 401
+ VA G + DG+++ WG++S Q P+ +D +K+
Sbjct: 497 AKDIVAVAAGTDNNFAIASDGKVYSWGFSSNYQTGQGTIDDIHTPTLIDNTAIRGKKIIG 556
Query: 402 AAGGGHSAVL 411
A GG +VL
Sbjct: 557 AGAGGQYSVL 566
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 86/213 (40%), Gaps = 44/213 (20%)
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD------GIFIKD 287
+ G+ + A ++ +VY +G GS G+LG S + +K+ + + L+ I +
Sbjct: 133 AIGKKLNDAPTQILDVYVFGEGSSGELGLGSKRVNNKKPIDVKRPRLNDNLSAANIGVVQ 192
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQL---------------------------GLGPQ 320
++CGG+H+ ALT + WG + G L G+ P
Sbjct: 193 ISCGGMHAVALTHDNKILTWGVNDQGALGRDTNWDGGLRDMDKSEDSDSEDEDDTGINPM 252
Query: 321 TRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWG-YNSYGQAAN 379
+ + + SD +F VQ+VA S + DGR++GWG + S
Sbjct: 253 ESTPTAV---SDEHFAPGTKF-----VQVVAS-DSASFALTEDGRVYGWGTFRSSDGILG 303
Query: 380 EKSTYAWYPSPVDW-CVGEVRKLAAGGGHSAVL 411
T +P+ + ++ LAAG H L
Sbjct: 304 FSETIKVQSTPLMIRDLKNIKALAAGSNHILAL 336
>gi|403263467|ref|XP_003924053.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
[Saimiri boliviensis boliviensis]
Length = 1024
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 116/237 (48%), Gaps = 17/237 (7%)
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
VSCG H +A+ G + AWG GQLG G E PR I KI
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTLNGI--------KII 131
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
QVSCG YHS A+S++ +V++WG S GQLG + + P+RV +L+GI + VA G
Sbjct: 132 QVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG--KEFPSQPSPQRVRSLEGIPLAQVAAG 189
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVA 351
G HS AL+ G + WG + AGQL L + S +N+ GV ++
Sbjct: 190 GAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNL-------GVIYIS 242
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
CG HT V +DG++ +G NS GQ + P V+ G V ++ GG H+
Sbjct: 243 CGDEHTAVLSQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGGDHT 299
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 144/321 (44%), Gaps = 60/321 (18%)
Query: 21 SAIYVWGYNHSGQTGRKGRER-QLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
S ++ G N GQ GR+G R L P Q A ++ ++CG EH+ AV
Sbjct: 42 SLVHSCGENSRGQLGRRGAPRWDLPEPVQ---------ALKTLKFDLVSCGKEHSLAVCH 92
Query: 80 DGTLFTWGANEFGQLGDG-TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
G +F WGA GQLG G +E P K+ L + +SCG + + A+++
Sbjct: 93 KGRVFAWGAGSEGQLGVGELKEINFTPRKITTLNGIKIIQVSCGHYHSLALSK------- 145
Query: 139 ISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSEC 185
S+++ WG+N G FP +P + + QV+ G H ALS C
Sbjct: 146 --DSQVFSWGKNSHGQLGLGKEFP----SQPSPQRVRSLEGIPLAQVAAGGAHSFALSLC 199
Query: 186 GLLQAWGYNEYGQL---GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
G WG N GQL GR + + P I G K L + +SCG+ H+A
Sbjct: 200 GTSFGWGSNSAGQLALSGRNVQVQS-NKPLSI-GALKNLG-------VIYISCGDEHTAV 250
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
+S++G+V+T+G S GQLG+ ++ P+ V +DG+ + + CGG H+ A
Sbjct: 251 LSQDGKVFTFGDNSSGQLGY---SPTPEKRGPQLVERIDGL-VSQIDCGGDHTIA----- 301
Query: 303 ALYAWGGSQAGQLGLGPQTRS 323
Y Q G GP S
Sbjct: 302 --YVHTTGQVVSFGRGPSATS 320
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 140/332 (42%), Gaps = 45/332 (13%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
L A G H + ++ + + G N GQLG PE V+ L++ +SCG
Sbjct: 26 LQAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKTLKFDLVSCGKE 85
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSNF--PRLFWGAFTPNTI-------ICQVSCG 175
+ A+ R++ WG L FTP I I QVSCG
Sbjct: 86 HSLAVCH---------KGRVFAWGAGSEGQLGVGELKEINFTPRKITTLNGIKIIQVSCG 136
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
H +ALS+ + +WG N +GQLG G P+ ++ L+ P + QV+
Sbjct: 137 HYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRS----LEGIP----LAQVAA 188
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
G HS A+S G + WG S GQL + P + AL + + ++CG H+
Sbjct: 189 GGAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHT 248
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLVACG 353
L+ G ++ +G + +GQLG P T + P LV + V + CG
Sbjct: 249 AVLSQDGKVFTFGDNSSGQLGYSP-------------TPEKRGPQLVERIDGLVSQIDCG 295
Query: 354 HSHTLVYMR-DGRIHGWGYNSYGQAANEKSTY 384
HT+ Y+ G++ +G G +A K T+
Sbjct: 296 GDHTIAYVHTTGQVVSFG---RGPSATSKPTH 324
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 117/242 (48%), Gaps = 25/242 (10%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG GQ G G +++ + L G + + ++CGH H+ A++
Sbjct: 93 KGRVFAWGAGSEGQLG-VGELKEINFTPRKITTLNGI------KIIQVSCGHYHSLALSK 145
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISC-GAHCTA-AIAEPREND 136
D +F+WG N GQLG G E + P++V+ L+ + ++ GAH A ++
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW 205
Query: 137 GTISTSRLWVWGQN--QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
G+ S +L + G+N SN P L GA N + +SCG H LS+ G + +G N
Sbjct: 206 GSNSAGQLALSGRNVQVQSNKP-LSIGALK-NLGVIYISCGDEHTAVLSQDGKVFTFGDN 263
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEVYTWG 253
GQLG T E +GP++++ ++Q+ CG H+ A V G+V ++G
Sbjct: 264 SSGQLGYSPTPEK-RGPQLVERIDGL---------VSQIDCGGDHTIAYVHTTGQVVSFG 313
Query: 254 LG 255
G
Sbjct: 314 RG 315
>gi|431895932|gb|ELK05350.1| Putative E3 ubiquitin-protein ligase HERC1 [Pteropus alecto]
Length = 4850
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 128/430 (29%), Positives = 195/430 (45%), Gaps = 70/430 (16%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
MD + T+RP D ++ K +Y+WG GQ GR + +P P
Sbjct: 3965 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMVPAAAP--------- 4013
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
+ S+ + CG T + ++GT+ G +G+LG G + + LQ V +
Sbjct: 4014 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQL 4073
Query: 120 --SCGAH-CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI---- 168
SCG+ + A+ E E ++ WG ++ +L G P I
Sbjct: 4074 VTSCGSDGHSMALTESGE---------VFSWGDG---DYGKLGHGNSDRQRRPRQIEALQ 4121
Query: 169 ---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV--IKGYAKFLDE 223
+ Q+SCG H ++ G L +G +YG+LG G T RV ++GY
Sbjct: 4122 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY------ 4175
Query: 224 APELEKITQVSCGEYHSAAVSENGE-VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG 282
+I QV+CG H+ AVS +G V+ +G G G+LG L + + P++V L G
Sbjct: 4176 -----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCG 4227
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL- 341
I IK VACG S ALT G +Y +G Q +GL P+ R+ + + IP+L
Sbjct: 4228 IGIKKVACGTQFSVALTKDGHVYTFG--QDRLIGL-PEGRA------RNHNRPQQIPVLA 4278
Query: 342 -VVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VR 399
VV ++ VA G HTL G ++ WG NS GQ + + P+ V G+ VR
Sbjct: 4279 GVV---IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVR 4335
Query: 400 KLAAGGGHSA 409
+++AG HSA
Sbjct: 4336 QISAGRCHSA 4345
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 182/405 (44%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ PK P + S I G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQ-PKLAP---------SFSDAQTIEAGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG----T 138
+ G +G+LG G + +K+L E +SI ++ + +DG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQS---TLKKLTFEPHRSIK-------KVSSSKGSDGHTLAF 473
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ ++ WG + +P+L G ++C VS G H A++E G L
Sbjct: 474 TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGEL 532
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G + P ++K ++ + +VSCG H+ A+S++G
Sbjct: 533 YTWGEGDFGRLGHGDS-NSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 581
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ + AL G+FI+ V G S ALTS G +Y
Sbjct: 582 TVWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVY 636
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V ++ G SH L D
Sbjct: 637 AWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-ISIGDSHCLALSHDNE 685
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 143/307 (46%), Gaps = 43/307 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V SDG
Sbjct: 4092 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTSDGK 4143
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG++
Sbjct: 4144 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA----DGSM--- 4196
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNT------IIC-----QVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T + ++C +V+CG+ VAL++ G + +
Sbjct: 4197 -VWAFGDG---DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4252
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ I A + I V+ G H+ A++ G+VY
Sbjct: 4253 GQDRLIGLPEG-RARNHNRPQQIPVLAGVV--------IEDVAVGAEHTLALASTGDVYA 4303
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWGGS 310
WG S GQLG L + P V L G ++ ++ G HS A T+ A G S
Sbjct: 4304 WGSNSEGQLG---LGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVS 4360
Query: 311 QAGQLGL 317
QLGL
Sbjct: 4361 VPLQLGL 4367
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P I I +V GS +AL+ G + AW
Sbjct: 583 -VWSFG---GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I +S G+ H A+S + EVY
Sbjct: 639 GCG--ACLGCGSSEATALRPKLIEELAA--------TRIVDISIGDSHCLALSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDGI I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 30/228 (13%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +GQL G V+ A AP + QV CG+ + + NG V
Sbjct: 3991 WGAGRHGQLAEA-------GRNVMVPAA-----APSFSQAQQVICGQNCTFVIQANGTVL 4038
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGALYAW 307
G GS G+LG + S D +L + AL G + + +CG HS ALT G +++W
Sbjct: 4039 ACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSW 4095
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G R R I L VQ+ +CG H+ V DG++
Sbjct: 4096 GDGDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLF 4145
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
+G YG+ ++ P V G ++ ++A G H+ AV AD
Sbjct: 4146 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 4193
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VSE EVY WG S QL G +E + + +A + + G + +++ G
Sbjct: 368 VSETCEVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ A G G+LGLG +L + + R+I + G HTL +
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RSIKKVSSSKG------SDGHTLAFTT 475
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+G + WG YG+ + S+ YP + + G+V ++AG HSA + +
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
>gi|405954128|gb|EKC21651.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
Length = 826
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 163/365 (44%), Gaps = 54/365 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N + Q G+E+ + PK + + + G T + SDGT
Sbjct: 399 VYVWGSNCTHQLAEGGQEK-ITTPKY---------SAVFTDCQQVEAGQFCTFLIYSDGT 448
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ G +G+LG G P+K ++VK IS ++ + +T
Sbjct: 449 VGACGKGSYGRLGLGDSNNCSVPKK-PLFDKKYVKKIS------SSKGSDGHSLALTTTG 501
Query: 143 RLWVWGQ----------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
++ WG + P+L G + C VS G H A++E G L WG
Sbjct: 502 EVYSWGDGDYGKLGHGTHSTQKIPKLVKGPLVGKVVKC-VSAGYRHSAAVTEDGELYTWG 560
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE-VYT 251
E+G+LG T F + +E + V+CG H+ AVS++G+ +++
Sbjct: 561 DGEFGRLGHDYTSS-----------KNFPTKVQSIESVGLVACGGSHTLAVSQDGKTIWS 609
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
+G G G+LGH +++L P+ + AL+G++I+ VACG S A+TS G LYAWG
Sbjct: 610 FGGGENGKLGH---GDTNRQLKPKVIEALNGLYIRKVACGSQSSLAVTSSGQLYAWGC-- 664
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGY 371
LG G + +L P R + L V +ACG SH + + ++ WG
Sbjct: 665 GAILGCGSAEYT-ALRP-------RLVEDLQSKRMVD-IACGDSHVIALTHESEVYAWGN 715
Query: 372 NSYGQ 376
N+ GQ
Sbjct: 716 NAMGQ 720
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G Q +IPK + L G ++ G+ H+AAV DG
Sbjct: 503 VYSWGDGDYGKLGHGTHSTQ-KIPKLVKGPLVGKVVKC------VSAGYRHSAAVTEDGE 555
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG EFG+LG + P KV+ ++S V ++CG T A+++ DG
Sbjct: 556 LYTWGDGEFGRLGHDYTSSKNFPTKVQSIES--VGLVACGGSHTLAVSQ----DG----K 605
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G +L G P I I +V+CGS +A++ G L AW
Sbjct: 606 TIWSFG---GGENGKLGHGDTNRQLKPKVIEALNGLYIRKVACGSQSSLAVTSSGQLYAW 662
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G PR++ E + +++ ++CG+ H A++ EVY
Sbjct: 663 GCGAI--LGCGSAEYTALRPRLV--------EDLQSKRMVDIACGDSHVIALTHESEVYA 712
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG ++GQ G QS P+RV+ LDG+ + V+ G HS A T+
Sbjct: 713 WGNNAMGQCGQGHAQSPITR--PKRVIGLDGVSVHQVSAGTSHSVAWTA 759
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 149/312 (47%), Gaps = 47/312 (15%)
Query: 71 HEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIA 130
H + S G ++ WG+N QL +G +E P+ + + G CT I
Sbjct: 387 HSNANLSGSCGEVYVWGSNCTHQLAEGGQEKITTPKYSAVFTD--CQQVEAGQFCTFLIY 444
Query: 131 EPRENDGTI------STSRLWVWGQNQGSNFPR--LFWGAFTPNTIICQVSCGSVHVVAL 182
+DGT+ S RL + G + + P+ LF + + S G H +AL
Sbjct: 445 ----SDGTVGACGKGSYGRLGL-GDSNNCSVPKKPLFDKKYVKKISSSKGSDG--HSLAL 497
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ-VSCGEYHSA 241
+ G + +WG +YG+LG G T + P+++KG P + K+ + VS G HSA
Sbjct: 498 TTTGEVYSWGDGDYGKLGHG-THSTQKIPKLVKG--------PLVGKVVKCVSAGYRHSA 548
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
AV+E+GE+YTWG G G+LGH S + P +V +++ + + VACGG H+ A++
Sbjct: 549 AVTEDGELYTWGDGEFGRLGHDYTSSKN---FPTKVQSIESVGL--VACGGSHTLAVSQD 603
Query: 302 G-ALYAWGGSQAGQLGLGPQTRSF--SLIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 358
G ++++GG + G+LG G R +I + Y R VACG +L
Sbjct: 604 GKTIWSFGGGENGKLGHGDTNRQLKPKVIEALNGLYIRK------------VACGSQSSL 651
Query: 359 VYMRDGRIHGWG 370
G+++ WG
Sbjct: 652 AVTSSGQLYAWG 663
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 105/231 (45%), Gaps = 28/231 (12%)
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
CG + WG N QL G G + K A F D QV G++ + +
Sbjct: 396 CGEVYVWGSNCTHQLAEG----GQEKITTPKYSAVFTD-------CQQVEAGQFCTFLIY 444
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC---GGVHSCALTSK 301
+G V G GS G+LG L + +P++ + D ++K ++ HS ALT+
Sbjct: 445 SDGTVGACGKGSYGRLG---LGDSNNCSVPKKPL-FDKKYVKKISSSKGSDGHSLALTTT 500
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
G +Y+WG G+LG G T S IP + + +V V+ V+ G+ H+
Sbjct: 501 GEVYSWGDGDYGKLGHG--THSTQKIP-------KLVKGPLVGKVVKCVSAGYRHSAAVT 551
Query: 362 RDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
DG ++ WG +G+ ++ ++ +P+ V + V +A GG H+ ++
Sbjct: 552 EDGELYTWGDGEFGRLGHDYTSSKNFPTKVQ-SIESVGLVACGGSHTLAVS 601
>gi|387540886|gb|AFJ71070.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
mulatta]
Length = 1020
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 122/238 (51%), Gaps = 19/238 (7%)
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
VSCG H +A+ G + AWG GQLG G E P+ I KI
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGI--------KII 131
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
QVSCG YHS A+S++ +V++WG S GQLG + + P+RV +L+GI + VA G
Sbjct: 132 QVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG--KEVPSQASPQRVRSLEGIPLAQVAAG 189
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN-GVQLV 350
G HS AL+ G + WG + AGQL L + +P +S+ + + I + N GV +
Sbjct: 190 GAHSFALSLCGTSFGWGSNSAGQLALSGRN-----VPVQSN---KPLSIGALKNLGVIYI 241
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
+CG HT V ++DG++ +G NS GQ + P V+ G V ++ G H+
Sbjct: 242 SCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHT 299
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 142/322 (44%), Gaps = 48/322 (14%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
L A G H+ + ++ + + G N GQLG + PE ++ L++ V +SCG
Sbjct: 26 LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKE 85
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQ-NQGS----NFPRLFWGAFTPNTI-------ICQV 172
+ A+ R++ WG ++G F + +FTP I I QV
Sbjct: 86 HSLAVCH---------KGRVFAWGAGSEGQLGIGEFKEI---SFTPKKITTLNGIKIIQV 133
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
SCG H +ALS+ + +WG N +GQLG G P+ ++ L+ P + Q
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRS----LEGIP----LAQ 185
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
V+ G HS A+S G + WG S GQL + P + AL + + ++CG
Sbjct: 186 VAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGD 245
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLV 350
H+ L G ++ +G + +GQLG P T + P LV + V +
Sbjct: 246 EHTAVLIQDGKVFTFGDNSSGQLGYSP-------------TPEKRGPQLVERIDGLVSQI 292
Query: 351 ACGHSHTLVYMR-DGRIHGWGY 371
CG HTL Y+ G++ +G+
Sbjct: 293 DCGSYHTLAYVHTTGQVISFGH 314
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 137/314 (43%), Gaps = 58/314 (18%)
Query: 27 GYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTW 86
G N GQ GR+ R P+ PE N ++CG EH+ AV G +F W
Sbjct: 48 GDNSRGQLGRR------RAPRGELPEPIQALETLNVDL--VSCGKEHSLAVCHKGRVFAW 99
Query: 87 GANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLW 145
GA GQLG G +E P+K+ L + +SCG + + A+++ S+++
Sbjct: 100 GAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK---------DSQVF 150
Query: 146 VWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWG 192
WG+N G P +P + + QV+ G H ALS CG WG
Sbjct: 151 SWGKNSHGQLGLGKEVP----SQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWG 206
Query: 193 YNEYGQL---GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
N GQL GR + + P I G K L + +SCG+ H+A + ++G+V
Sbjct: 207 SNSAGQLALSGRNVPVQS-NKPLSI-GALKNLG-------VIYISCGDEHTAVLIQDGKV 257
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
+T+G S GQLG+ ++ P+ V +DG+ + + CG H+ A Y
Sbjct: 258 FTFGDNSSGQLGY---SPTPEKRGPQLVERIDGL-VSQIDCGSYHTLA-------YVHTT 306
Query: 310 SQAGQLGLGPQTRS 323
Q G GP S
Sbjct: 307 GQVISFGHGPSDTS 320
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 117/242 (48%), Gaps = 25/242 (10%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG GQ G G +++ + L G + + ++CGH H+ A++
Sbjct: 93 KGRVFAWGAGSEGQLG-IGEFKEISFTPKKITTLNGI------KIIQVSCGHYHSLALSK 145
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISC-GAHCTA-AIAEPREND 136
D +F+WG N GQLG G E + P++V+ L+ + ++ GAH A ++
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW 205
Query: 137 GTISTSRLWVWGQN--QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
G+ S +L + G+N SN P L GA N + +SCG H L + G + +G N
Sbjct: 206 GSNSAGQLALSGRNVPVQSNKP-LSIGALK-NLGVIYISCGDEHTAVLIQDGKVFTFGDN 263
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEVYTWG 253
GQLG T E +GP++++ ++Q+ CG YH+ A V G+V ++G
Sbjct: 264 SSGQLGYSPTPEK-RGPQLVERIDGL---------VSQIDCGSYHTLAYVHTTGQVISFG 313
Query: 254 LG 255
G
Sbjct: 314 HG 315
>gi|325180681|emb|CCA15086.1| RCC1 and BTB domaincontaining protein putative [Albugo laibachii
Nc14]
Length = 554
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 139/303 (45%), Gaps = 31/303 (10%)
Query: 23 IYVWGYNHSGQ--TGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
++ GYN SGQ G R + LR+ L E AN G EH A++
Sbjct: 65 VFTCGYNDSGQCGIGSTSRVQSLRLVPALVTEDIAHIRSAN--------GCEHLTAISRS 116
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G L+T+G N GQLG G+ P K+K L S V ++C T + +GT+
Sbjct: 117 GALYTFGFNSRGQLGHGSTNPITTPTKIKDLASYHVVEVACSYFHTIVMTM----EGTLY 172
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
+ L G + G + + + + V+CG H V G + A+G N++G
Sbjct: 173 AFGRNDLGQLGIDDGMDRHVPVPLTYFNSRPVLAVACGQHHTVVSLTNGGVVAFGKNDHG 232
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG G T + P ++ A LD + ++CG YH+ A++E+G VY++G
Sbjct: 233 QLGTGYTLDYHASPSLL---AAPLDSL----VVPSLACGYYHTIALAEHGSVYSFGRNDY 285
Query: 258 GQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
GQLGH G + L P + AL V CG H+ L+ G +Y +G + GQL
Sbjct: 286 GQLGH-----GHRHHLSEPTLIKALAKTHAVQVTCGCYHTLVLSEDGKVYPFGRNNHGQL 340
Query: 316 GLG 318
GLG
Sbjct: 341 GLG 343
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 137/291 (47%), Gaps = 33/291 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I A+Y +G+N GQ G G + P ++ A+ +++AC + HT
Sbjct: 113 ISRSGALYTFGFNSRGQLGH-GSTNPITTPTKIKDL-------ASYHVVEVACSYFHTIV 164
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTA-------AI 129
+ +GTL+ +G N+ GQLG R P + S V +++CG H T +
Sbjct: 165 MTMEGTLYAFGRNDLGQLGIDDGMDRHVPVPLTYFNSRPVLAVACGQHHTVVSLTNGGVV 224
Query: 130 AEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQ 189
A + + G + T + + P L A + ++ ++CG H +AL+E G +
Sbjct: 225 AFGKNDHGQLGTGYTLDYHAS-----PSLL-AAPLDSLVVPSLACGYYHTIALAEHGSVY 278
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
++G N+YGQLG G L P +IK AK QV+CG YH+ +SE+G+V
Sbjct: 279 SFGRNDYGQLGHGHR-HHLSEPTLIKALAK--------THAVQVTCGCYHTLVLSEDGKV 329
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
Y +G + GQLG +L P+ + +L F+ VA G HS LT+
Sbjct: 330 YPFGRNNHGQLGLGNLIDCTS---PQIIASLRDKFVVKVASGFYHSICLTA 377
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 164/366 (44%), Gaps = 40/366 (10%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K A V+G GQ + + LP + C N + LD+ACG+E TA +
Sbjct: 5 KIAHEVFGAYSFGQNSYGELCHNDTVDRTLPTPISFC---HNVKILDVACGNEQTAFLFE 61
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
G +FT G N+ GQ G G+ + V L +E + I C A R G +
Sbjct: 62 TGDVFTCGYNDSGQCGIGSTSRVQSLRLVPALVTEDIAHIRSANGCEHLTAISRS--GAL 119
Query: 140 STSRLWVWGQ-NQGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
T GQ GS P TP I + +V+C H + ++ G L A+
Sbjct: 120 YTFGFNSRGQLGHGSTNP-----ITTPTKIKDLASYHVVEVACSYFHTIVMTMEGTLYAF 174
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G N+ GQLG +G+ R + + + P L V+CG++H+ NG V
Sbjct: 175 GRNDLGQLGID---DGMD--RHVPVPLTYFNSRPVLA----VACGQHHTVVSLTNGGVVA 225
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
+G GQLG + + D P + A LD + + +ACG H+ AL G++Y++G +
Sbjct: 226 FGKNDHGQLG--TGYTLDYHASPSLLAAPLDSLVVPSLACGYYHTIALAEHGSVYSFGRN 283
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWG 370
GQLG G + + S+ I L + VQ V CG HTLV DG+++ +G
Sbjct: 284 DYGQLGHGHRH-------HLSEPTL--IKALAKTHAVQ-VTCGCYHTLVLSEDGKVYPFG 333
Query: 371 YNSYGQ 376
N++GQ
Sbjct: 334 RNNHGQ 339
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 93/222 (41%), Gaps = 21/222 (9%)
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
++G N YG+L C R + F KI V+CG +A + E G+V
Sbjct: 15 SFGQNSYGEL-----CHNDTVDRTLPTPISFCHNV----KILDVACGNEQTAFLFETGDV 65
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
+T G GQ G S L +V D I+ A G H A++ GALY +G
Sbjct: 66 FTCGYNDSGQCGIGSTSRVQSLRLVPALVTEDIAHIRS-ANGCEHLTAISRSGALYTFGF 124
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGW 369
+ GQLG G S P + T +++ V VAC + HT+V +G ++ +
Sbjct: 125 NSRGQLGHG------STNPITTPTKIKDL----ASYHVVEVACSYFHTIVMTMEGTLYAF 174
Query: 370 GYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAV 410
G N GQ + P P+ + V +A G H+ V
Sbjct: 175 GRNDLGQLGIDDGMDRHVPVPLTYFNSRPVLAVACGQHHTVV 216
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 8/117 (6%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++Y +G N GQ G G L P + A A + + + CG HT ++ DG
Sbjct: 276 SVYSFGRNDYGQLGH-GHRHHLSEPTLIK-------ALAKTHAVQVTCGCYHTLVLSEDG 327
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
++ +G N GQLG G P+ + L+ +FV ++ G + + + + + G+
Sbjct: 328 KVYPFGRNNHGQLGLGNLIDCTSPQIIASLRDKFVVKVASGFYHSICLTATKNSVGS 384
>gi|410961060|ref|XP_003987103.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1 [Felis catus]
Length = 4861
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 128/430 (29%), Positives = 195/430 (45%), Gaps = 70/430 (16%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
MD + T+RP D ++ K +Y+WG GQ GR + +P P
Sbjct: 3976 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMVPAAAP--------- 4024
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
+ S+ + CG T + ++GT+ G +G+LG G + + LQ V +
Sbjct: 4025 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQL 4084
Query: 120 --SCGAH-CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI---- 168
SCG+ + A+ E E ++ WG ++ +L G P I
Sbjct: 4085 VTSCGSDGHSMALTESGE---------VFSWGDG---DYGKLGHGNSDRQRRPRQIEALQ 4132
Query: 169 ---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV--IKGYAKFLDE 223
+ Q+SCG H ++ G L +G +YG+LG G T RV ++GY
Sbjct: 4133 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY------ 4186
Query: 224 APELEKITQVSCGEYHSAAVSENGE-VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG 282
+I QV+CG H+ AVS +G V+ +G G G+LG L + + P++V L G
Sbjct: 4187 -----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCG 4238
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL- 341
I IK VACG S ALT G +Y +G Q +GL P+ R+ + + IP+L
Sbjct: 4239 IGIKKVACGTQFSVALTKDGHVYTFG--QDRLIGL-PEGRA------RNHNRPQQIPVLA 4289
Query: 342 -VVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VR 399
VV ++ VA G HTL G ++ WG NS GQ + + P+ V G+ VR
Sbjct: 4290 GVV---IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVR 4346
Query: 400 KLAAGGGHSA 409
+++AG HSA
Sbjct: 4347 QISAGRCHSA 4356
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 182/405 (44%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ PK P + S I G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQ-PKLAP---------SFSDAQTIEAGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG----T 138
+ G +G+LG G + +K+L E +SI ++ + +DG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQS---TLKKLTFEPHRSIK-------KVSSSKGSDGHTLAF 473
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ ++ WG + +P+L G ++C VS G H A++E G L
Sbjct: 474 TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGEL 532
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G + P ++K ++ + +VSCG H+ A+S++G
Sbjct: 533 YTWGEGDFGRLGHGDS-NSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 581
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ V AL G+FI+ V G S ALTS G +Y
Sbjct: 582 TVWSFGGGDNGKLGH-----GDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVY 636
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V ++ G SH L D
Sbjct: 637 AWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-ISIGDSHCLALSHDNE 685
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 143/307 (46%), Gaps = 43/307 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V SDG
Sbjct: 4103 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTSDGK 4154
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG++
Sbjct: 4155 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA----DGSM--- 4207
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNT------IIC-----QVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T + ++C +V+CG+ VAL++ G + +
Sbjct: 4208 -VWAFGDG---DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4263
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ I A + I V+ G H+ A++ G+VY
Sbjct: 4264 GQDRLIGLPEG-RARNHNRPQQIPVLAGVV--------IEDVAVGAEHTLALASTGDVYA 4314
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWGGS 310
WG S GQLG L + P V L G ++ ++ G HS A T+ A G S
Sbjct: 4315 WGSNSEGQLG---LGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVS 4371
Query: 311 QAGQLGL 317
QLGL
Sbjct: 4372 VPLQLGL 4378
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P + I +V GS +AL+ G + AW
Sbjct: 583 -VWSFG---GGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I +S G+ H A+S + EVY
Sbjct: 639 GCG--ACLGCGSSEATALRPKLIEELAA--------TRIVDISIGDSHCLALSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDGI I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 30/228 (13%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +GQL G V+ A AP + QV CG+ + + NG V
Sbjct: 4002 WGAGRHGQLAEA-------GRNVMVPAA-----APSFSQAQQVICGQNCTFVIQANGTVL 4049
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGALYAW 307
G GS G+LG + S D +L + AL G + + +CG HS ALT G +++W
Sbjct: 4050 ACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSW 4106
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G R R I L VQ+ +CG H+ V DG++
Sbjct: 4107 GDGDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLF 4156
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
+G YG+ ++ P V G ++ ++A G H+ AV AD
Sbjct: 4157 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 4204
>gi|417407153|gb|JAA50201.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
Length = 4846
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 126/429 (29%), Positives = 191/429 (44%), Gaps = 68/429 (15%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
MD + T+RP D ++ K +Y+WG GQ GR + +P P
Sbjct: 3961 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMVPAAAP--------- 4009
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
+ S+ + CG T + ++GT+ G +G+LG G + + LQ V +
Sbjct: 4010 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQL 4069
Query: 120 --SCGAH-CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI---- 168
SCG+ + A+ E E ++ WG ++ +L G P I
Sbjct: 4070 VTSCGSDGHSMALTESGE---------VFSWGDG---DYGKLGHGNSDRQRRPRQIEALQ 4117
Query: 169 ---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV--IKGYAKFLDE 223
+ Q+SCG H ++ G L +G +YG+LG G T RV ++GY
Sbjct: 4118 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY------ 4171
Query: 224 APELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
+I QV+CG H+ AVS +G V W G G G L + + P++V L GI
Sbjct: 4172 -----QIGQVACGLNHTLAVSADGSV-VWAFGD-GDYGKLGLGNSTAKSSPQKVDVLCGI 4224
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL-- 341
IK VACG S ALT G +Y +G Q +GL P+ R+ + + IP+L
Sbjct: 4225 GIKKVACGTQFSVALTKDGHVYTFG--QDRLIGL-PEGRA------RNHNRPQQIPVLAG 4275
Query: 342 VVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRK 400
VV ++ VA G HTL G ++ WG NS GQ + + P+ V G+ +R+
Sbjct: 4276 VV---IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ 4332
Query: 401 LAAGGGHSA 409
++AG HSA
Sbjct: 4333 ISAGRCHSA 4341
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 182/405 (44%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ PK P + S I G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQ-PKLAP---------SFSDAQTIEAGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG----T 138
+ G +G+LG G + +K+L E +SI ++ + +DG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQS---TLKKLTFEPHRSIK-------KVSSSKGSDGHTLAF 473
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ ++ WG + +P+L G ++C VS G H A++E G L
Sbjct: 474 TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGEL 532
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G + P ++K ++ + +VSCG H+ A+S++G
Sbjct: 533 YTWGEGDFGRLGHGDS-NSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 581
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ + AL G+FI+ V G S +LTS G +Y
Sbjct: 582 TVWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVY 636
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V ++ G SH L D
Sbjct: 637 AWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-ISIGDSHCLALSHDNE 685
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 143/307 (46%), Gaps = 43/307 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V SDG
Sbjct: 4088 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTSDGK 4139
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG++
Sbjct: 4140 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA----DGSV--- 4192
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNT------IIC-----QVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T + ++C +V+CG+ VAL++ G + +
Sbjct: 4193 -VWAFGDG---DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4248
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ I A + I V+ G H+ A++ G+VY
Sbjct: 4249 GQDRLIGLPEG-RARNHNRPQQIPVLAGVV--------IEDVAVGAEHTLALASTGDVYA 4299
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWGGS 310
WG S GQLG L + P V L G I+ ++ G HS A T+ A G S
Sbjct: 4300 WGSNSEGQLG---LGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPVPPRAPGVS 4356
Query: 311 QAGQLGL 317
QLGL
Sbjct: 4357 VPLQLGL 4363
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P I I +V GS ++L+ G + AW
Sbjct: 583 -VWSFG---GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I +S G+ H A+S + EVY
Sbjct: 639 GCG--ACLGCGSSEATALRPKLIEELAA--------TRIVDISIGDSHCLALSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDGI I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 30/228 (13%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +GQL G V+ A AP + QV CG+ + + NG V
Sbjct: 3987 WGAGRHGQLAEA-------GRNVMVPAA-----APSFSQAQQVICGQNCTFVIQANGTVL 4034
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGALYAW 307
G GS G+LG + S D +L + AL G + + +CG HS ALT G +++W
Sbjct: 4035 ACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSW 4091
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G R R I L VQ+ +CG H+ V DG++
Sbjct: 4092 GDGDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLF 4141
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
+G YG+ ++ P V G ++ ++A G H+ AV AD
Sbjct: 4142 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 4189
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VSE EVY WG S QL G +E + + +A + + G + +++ G
Sbjct: 368 VSETCEVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ A G G+LGLG +L + + R+I + G HTL +
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RSIKKVSSSKG------SDGHTLAFTT 475
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+G + WG YG+ + S+ YP + + G+V ++AG HSA + +
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
>gi|380792689|gb|AFE68220.1| RCC1 and BTB domain-containing protein 1, partial [Macaca mulatta]
Length = 345
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 141/304 (46%), Gaps = 39/304 (12%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V D +F +G N LG G + P+K++ L + +KS+S G+ ++ D
Sbjct: 37 VTDDDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLSGKKIKSLSYGSGPHVLLST---ED 93
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQV---SCGSVHVVALSECGL 187
G + + WG N G+ + N +I QV +CGS H +AL+ G
Sbjct: 94 GVV-----YAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGE 148
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWGYN GQ+G G T PR + ++++ ++CG+ S AV +NG
Sbjct: 149 VFAWGYNNCGQVGSGSTAN-QPTPRKVT-------NCLHIKRVVGIACGQTSSMAVLDNG 200
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
EVY WG GQLG L + +L P RV AL + + + CG H+ ALT +G LYAW
Sbjct: 201 EVYGWGYNGNGQLG---LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAW 257
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRI 366
G + GQLG G + S P + V++ AC +HT + G +
Sbjct: 258 GANTYGQLGTGNKNNLLS--PAHIMVEKERV--------VEIAACHSAHTSAAKTQGGHV 307
Query: 367 HGWG 370
+ WG
Sbjct: 308 YMWG 311
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 118/233 (50%), Gaps = 29/233 (12%)
Query: 148 GQNQGSNFPRLFWGAFTPNTIICQVSCGS-VHVVALSECGLLQAWGYNEYGQLGRGITCE 206
G NQ + P+ G I +S GS HV+ +E G++ AWG+N Y QLG G T +
Sbjct: 57 GDNQSTLVPKKLEG--LSGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQ 114
Query: 207 GLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQ 266
G+ +V ++++ +V+CG +HS A++ +GEV+ WG + GQ+G S
Sbjct: 115 GIAPIQVCTNLL--------IKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTA 166
Query: 267 SGDKELLPRRVVALDGIFIKDV---ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRS 323
+ + PR+V + + IK V ACG S A+ G +Y WG + GQLGLG
Sbjct: 167 N---QPTPRKVT--NCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ 221
Query: 324 FSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+ + R + V V + CG++HTL +G ++ WG N+YGQ
Sbjct: 222 LTPV--------RVAALHSVC--VNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 113/243 (46%), Gaps = 37/243 (15%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG+N Q G G Q P Q+ L + +++ACG H+ A+A+DG
Sbjct: 95 VVYAWGHNGYSQLGN-GTTNQGIAPIQVCTNLL------IKQVVEVACGSHHSMALAADG 147
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+F WG N GQ+G G+ + P KV L + V I+CG + A+ + E
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGE------ 201
Query: 141 TSRLWVWGQN------QGSNFPRLFWGAFTPNTIIC--QVSCGSVHVVALSECGLLQAWG 192
++ WG N G+N +L +C Q+ CG H +AL++ GLL AWG
Sbjct: 202 ---VYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G L ++ E E++ ++ +C H SAA ++ G VY
Sbjct: 259 ANTYGQLGTGNKNNLLSPAHIMV----------EKERVVEIAACHSAHTSAAKTQGGHVY 308
Query: 251 TWG 253
WG
Sbjct: 309 MWG 311
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 141/334 (42%), Gaps = 46/334 (13%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G +A + ++V+G N+S G G + +PK+L +G + L
Sbjct: 26 VFGTSASEALYVTDDDEVFVFGLNYSNCLG-TGDNQSTLVPKKLEGL-----SGKKIKSL 79
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV-KQLQSEFVKSISCGAH 124
G H DG ++ WG N + QLG+GT P +V L + V ++CG+H
Sbjct: 80 SYGSG-PHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSH 138
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQ------GSN----FPRLFWGAFTPNTIICQVSC 174
+ A+A E ++ WG N GS PR ++ ++C
Sbjct: 139 HSMALAADGE---------VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVV-GIAC 188
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G +A+ + G + WGYN GQLG G L RV A + Q+
Sbjct: 189 GQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRV---------AALHSVCVNQIV 239
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGG 292
CG H+ A+++ G +Y WG + GQLG +G+K L P ++ ++ AC
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLG-----TGNKNNLLSPAHIMVEKERVVEIAACHS 294
Query: 293 VH-SCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
H S A T G +Y WG + GQ + P FS
Sbjct: 295 AHTSAAKTQGGHVYMWGQCR-GQSVILPHLTHFS 327
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 80/173 (46%), Gaps = 17/173 (9%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHSCALT 299
V+++ EV+ +GL LG +GD + L+P+++ L G IK ++ G G H T
Sbjct: 37 VTDDDEVFVFGLNYSNCLG-----TGDNQSTLVPKKLEGLSGKKIKSLSYGSGPHVLLST 91
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
G +YAWG + QLG G + + I ++ + V VACG H++
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQ---------VVEVACGSHHSMA 142
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
DG + WGYN+ GQ + + P V C+ R + G ++ +A
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMA 195
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 20/151 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WGYN +GQ G QL P ++ C I CG+ HT A+ +G
Sbjct: 202 VYGWGYNGNGQLGLGNNGNQLT-PVRVAALHSVCVN-------QIVCGYAHTLALTDEGL 253
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
L+ WGAN +GQLG G + P + + V+ +C AH +AA +
Sbjct: 254 LYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQG--------- 304
Query: 142 SRLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 305 GHVYMWGQCRGQSVILPHLTHFSCTDDVFAC 335
>gi|417407155|gb|JAA50202.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
Length = 4853
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 126/429 (29%), Positives = 191/429 (44%), Gaps = 68/429 (15%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
MD + T+RP D ++ K +Y+WG GQ GR + +P P
Sbjct: 3968 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMVPAAAP--------- 4016
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
+ S+ + CG T + ++GT+ G +G+LG G + + LQ V +
Sbjct: 4017 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQL 4076
Query: 120 --SCGAH-CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI---- 168
SCG+ + A+ E E ++ WG ++ +L G P I
Sbjct: 4077 VTSCGSDGHSMALTESGE---------VFSWGDG---DYGKLGHGNSDRQRRPRQIEALQ 4124
Query: 169 ---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV--IKGYAKFLDE 223
+ Q+SCG H ++ G L +G +YG+LG G T RV ++GY
Sbjct: 4125 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY------ 4178
Query: 224 APELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
+I QV+CG H+ AVS +G V W G G G L + + P++V L GI
Sbjct: 4179 -----QIGQVACGLNHTLAVSADGSV-VWAFGD-GDYGKLGLGNSTAKSSPQKVDVLCGI 4231
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL-- 341
IK VACG S ALT G +Y +G Q +GL P+ R+ + + IP+L
Sbjct: 4232 GIKKVACGTQFSVALTKDGHVYTFG--QDRLIGL-PEGRA------RNHNRPQQIPVLAG 4282
Query: 342 VVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRK 400
VV ++ VA G HTL G ++ WG NS GQ + + P+ V G+ +R+
Sbjct: 4283 VV---IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQ 4339
Query: 401 LAAGGGHSA 409
++AG HSA
Sbjct: 4340 ISAGRCHSA 4348
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 182/405 (44%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ PK P + S I G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQ-PKLAP---------SFSDAQTIEAGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG----T 138
+ G +G+LG G + +K+L E +SI ++ + +DG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQS---TLKKLTFEPHRSIK-------KVSSSKGSDGHTLAF 473
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ ++ WG + +P+L G ++C VS G H A++E G L
Sbjct: 474 TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGEL 532
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G + P ++K ++ + +VSCG H+ A+S++G
Sbjct: 533 YTWGEGDFGRLGHGDS-NSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 581
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ + AL G+FI+ V G S +LTS G +Y
Sbjct: 582 TVWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVY 636
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V ++ G SH L D
Sbjct: 637 AWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-ISIGDSHCLALSHDNE 685
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 143/307 (46%), Gaps = 43/307 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V SDG
Sbjct: 4095 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTSDGK 4146
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG++
Sbjct: 4147 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA----DGSV--- 4199
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNT------IIC-----QVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T + ++C +V+CG+ VAL++ G + +
Sbjct: 4200 -VWAFGDG---DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4255
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ I A + I V+ G H+ A++ G+VY
Sbjct: 4256 GQDRLIGLPEG-RARNHNRPQQIPVLAGVV--------IEDVAVGAEHTLALASTGDVYA 4306
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWGGS 310
WG S GQLG L + P V L G I+ ++ G HS A T+ A G S
Sbjct: 4307 WGSNSEGQLG---LGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPVPPRAPGVS 4363
Query: 311 QAGQLGL 317
QLGL
Sbjct: 4364 VPLQLGL 4370
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P I I +V GS ++L+ G + AW
Sbjct: 583 -VWSFG---GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I +S G+ H A+S + EVY
Sbjct: 639 GCG--ACLGCGSSEATALRPKLIEELAA--------TRIVDISIGDSHCLALSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDGI I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 30/228 (13%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +GQL G V+ A AP + QV CG+ + + NG V
Sbjct: 3994 WGAGRHGQLAEA-------GRNVMVPAA-----APSFSQAQQVICGQNCTFVIQANGTVL 4041
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGALYAW 307
G GS G+LG + S D +L + AL G + + +CG HS ALT G +++W
Sbjct: 4042 ACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSW 4098
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G R R I L VQ+ +CG H+ V DG++
Sbjct: 4099 GDGDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLF 4148
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
+G YG+ ++ P V G ++ ++A G H+ AV AD
Sbjct: 4149 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 4196
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VSE EVY WG S QL G +E + + +A + + G + +++ G
Sbjct: 368 VSETCEVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ A G G+LGLG +L + + R+I + G HTL +
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RSIKKVSSSKG------SDGHTLAFTT 475
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+G + WG YG+ + S+ YP + + G+V ++AG HSA + +
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
>gi|326674002|ref|XP_001334658.4| PREDICTED: RCC1 and BTB domain-containing protein 2 [Danio rerio]
Length = 527
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 142/307 (46%), Gaps = 45/307 (14%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V + +F G N G LG G + P ++ L + + S+S G IA D
Sbjct: 37 VTVNDEVFALGTNCSGCLGLGDTQSTIEPRRIDILCGKKIISLSYGTGPHVVIATA---D 93
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTI---ICQVSCGSVHVVALSECGL 187
G + + WG N G+ L + N I + +VSCGS H +AL+ G
Sbjct: 94 GEV-----YAWGHNGYSQLGNGTTNHGLTPALVSTNLIGKRVTEVSCGSHHTIALTTDGE 148
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWGYN GQ+G G T RV + + + ++CG+ S AV +NG
Sbjct: 149 VYAWGYNNSGQVGSGSTANQPTPRRV--------SSCLQNKVVVNIACGQLCSMAVLDNG 200
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
E Y WG GQLG L + + P R+ AL GI I VACG H+ ALT +G +Y+W
Sbjct: 201 ETYGWGYNCNGQLG---LGNNGNQQTPCRIAALQGINIIQVACGYAHTLALTDEGFVYSW 257
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG---VQLVACGHSHT-LVYMRD 363
G + GQLG G N+S+ + +P L+ + V++ AC SHT +
Sbjct: 258 GANSYGQLGTG----------NKSN---QAVPTLINMDKERMVEVAACHTSHTSAAKTQS 304
Query: 364 GRIHGWG 370
G++ WG
Sbjct: 305 GQVLMWG 311
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 114/227 (50%), Gaps = 22/227 (9%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HVV + G + AWG+N Y QLG G T GL V +++T+VSCG
Sbjct: 86 HVVIATADGEVYAWGHNGYSQLGNGTTNHGLTPALVSTNLIG--------KRVTEVSCGS 137
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHSC 296
+H+ A++ +GEVY WG + GQ+G S + + PRRV + L + ++ACG + S
Sbjct: 138 HHTIALTTDGEVYAWGYNNSGQVGSGSTAN---QPTPRRVSSCLQNKVVVNIACGQLCSM 194
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G Y WG + GQLGLG N + I L N +Q VACG++H
Sbjct: 195 AVLDNGETYGWGYNCNGQLGLGN---------NGNQQTPCRIAALQGINIIQ-VACGYAH 244
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 403
TL +G ++ WG NSYGQ + P+ ++ + ++AA
Sbjct: 245 TLALTDEGFVYSWGANSYGQLGTGNKSNQAVPTLINMDKERMVEVAA 291
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 115/247 (46%), Gaps = 39/247 (15%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A +Y WG+N Q G G P + L G R +++CG HT A+
Sbjct: 92 ADGEVYAWGHNGYSQLG-NGTTNHGLTPALVSTNLIG------KRVTEVSCGSHHTIALT 144
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDG 137
+DG ++ WG N GQ+G G+ + P +V LQ++ V +I+CG C+ A+ + E G
Sbjct: 145 TDGEVYAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGETYG 204
Query: 138 TISTSRLWVWGQ---------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
WG N G+ A II QV+CG H +AL++ G +
Sbjct: 205 ---------WGYNCNGQLGLGNNGNQQTPCRIAALQGINII-QVACGYAHTLALTDEGFV 254
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSEN 246
+WG N YGQLG G P +I +D+ E++ +V +C H SAA +++
Sbjct: 255 YSWGANSYGQLGTG-NKSNQAVPTLIN-----MDK----ERMVEVAACHTSHTSAAKTQS 304
Query: 247 GEVYTWG 253
G+V WG
Sbjct: 305 GQVLMWG 311
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 121/287 (42%), Gaps = 49/287 (17%)
Query: 63 RWLDIACGHE----------HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK-QL 111
R +DI CG + H +DG ++ WG N + QLG+GT P V L
Sbjct: 66 RRIDILCGKKIISLSYGTGPHVVIATADGEVYAWGHNGYSQLGNGTTNHGLTPALVSTNL 125
Query: 112 QSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWG 161
+ V +SCG+H T A+ DG + + WG N PR
Sbjct: 126 IGKRVTEVSCGSHHTIALT----TDGEV-----YAWGYNNSGQVGSGSTANQPTPRRVSS 176
Query: 162 AFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFL 221
N ++ ++CG + +A+ + G WGYN GQLG G R+
Sbjct: 177 CL-QNKVVVNIACGQLCSMAVLDNGETYGWGYNCNGQLGLGNNGNQQTPCRI-------- 227
Query: 222 DEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVA 279
A + I QV+CG H+ A+++ G VY+WG S GQLG +G+K + +P +
Sbjct: 228 -AALQGINIIQVACGYAHTLALTDEGFVYSWGANSYGQLG-----TGNKSNQAVPTLINM 281
Query: 280 LDGIFIKDVACGGVH-SCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
++ AC H S A T G + WG + GQ P F+
Sbjct: 282 DKERMVEVAACHTSHTSAAKTQSGQVLMWGQCR-GQAVAYPHLTHFT 327
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 81/177 (45%), Gaps = 19/177 (10%)
Query: 225 PELEKITQVSCGEYHSAA-----VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA 279
PE ++ + +C + SAA V+ N EV+ G G LG QS + PRR+
Sbjct: 15 PEELRLIRQAC-VFGSAANEAIYVTVNDEVFALGTNCSGCLGLGDTQS---TIEPRRIDI 70
Query: 280 LDGIFIKDVACG-GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
L G I ++ G G H T+ G +YAWG + QLG G T + L P T
Sbjct: 71 LCGKKIISLSYGTGPHVVIATADGEVYAWGHNGYSQLGNG--TTNHGLTPALVSTN---- 124
Query: 339 PILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 395
++ V V+CG HT+ DG ++ WGYN+ GQ + + P V C+
Sbjct: 125 ---LIGKRVTEVSCGSHHTIALTTDGEVYAWGYNNSGQVGSGSTANQPTPRRVSSCL 178
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 68/150 (45%), Gaps = 20/150 (13%)
Query: 24 YVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTL 83
Y WGYN +GQ G Q Q P + A + +ACG+ HT A+ +G +
Sbjct: 203 YGWGYNCNGQLGLGNNGNQ-----QTPCRI---AALQGINIIQVACGYAHTLALTDEGFV 254
Query: 84 FTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTISTS 142
++WGAN +GQLG G + + P + + V+ +C +H +AA + +
Sbjct: 255 YSWGANSYGQLGTGNKSNQAVPTLINMDKERMVEVAACHTSHTSAAKTQ---------SG 305
Query: 143 RLWVWGQ--NQGSNFPRLFWGAFTPNTIIC 170
++ +WGQ Q +P L T + C
Sbjct: 306 QVLMWGQCRGQAVAYPHLTHFTSTDDVFAC 335
>gi|301767480|ref|XP_002919156.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
[Ailuropoda melanoleuca]
Length = 551
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 116/233 (49%), Gaps = 24/233 (10%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H+V + G + WG+N Y QLG G T GL + + +++T+V+CG
Sbjct: 110 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN--------KQVTEVACGS 161
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHSC 296
YHS ++ +GEV+ WG + GQ+G S + +PRRV L ++ACG + S
Sbjct: 162 YHSLVLTSDGEVFAWGYNNSGQVGS---GSTANQPIPRRVTGCLQNKVAVNIACGQMCSM 218
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ + G +Y WG + GQLGLG + + R VQ VACG++H
Sbjct: 219 AVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR----------VQRVACGYAH 268
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
TLV +G+++ WG NSYGQ + YP+PV V + R + HSA
Sbjct: 269 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPV--IVEKDRIIEIAACHSA 319
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 131/300 (43%), Gaps = 43/300 (14%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTAAIAEPRENDGTIS 140
+F G N G LG G + P ++ L + + +S G+ H A E
Sbjct: 67 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTE--------- 117
Query: 141 TSRLWVWGQNQGSNFPR---------LFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
++ WG N S N + +V+CGS H + L+ G + AW
Sbjct: 118 -GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAW 176
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
GYN GQ+G G T PR + G + + ++CG+ S AV GEVY
Sbjct: 177 GYNNSGQVGSGSTANQ-PIPRRVTG-------CLQNKVAVNIACGQMCSMAVVNTGEVYV 228
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG GQLG L S + P R+ AL GI ++ VACG H+ LT +G +YAWG +
Sbjct: 229 WGYNGNGQLG---LGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 285
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRIHGWG 370
GQLG G N+S+ + I+ +++ AC +HT + G ++ WG
Sbjct: 286 YGQLGTG----------NKSNQSYPAPVIVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 114/243 (46%), Gaps = 39/243 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G +P + L +N + ++ACG H+ + SDG
Sbjct: 120 VFTWGHNAYSQLG-NGTTNHGLVPCHISTNL------SNKQVTEVACGSYHSLVLTSDGE 172
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P +V LQ++ +I+CG C+ A+ ++T
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVAVNIACGQMCSMAV---------VNT 223
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N N P A + +V+CG H + L++ G + AWG
Sbjct: 224 GEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 283
Query: 194 NEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G + + P ++ E ++I ++ +C H SAA ++ G VY
Sbjct: 284 NSYGQLGTGNKSNQSYPAPVIV-----------EKDRIIEIAACHSAHTSAAKTQGGHVY 332
Query: 251 TWG 253
WG
Sbjct: 333 MWG 335
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 20/151 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G Q P A R +ACG+ HT + +G
Sbjct: 226 VYVWGYNGNGQLGLGSSGNQ--------PTPCRIAALQGIRVQRVACGYAHTLVLTDEGQ 277
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
++ WGAN +GQLG G + + +P V + ++ +C AH +AA +
Sbjct: 278 VYAWGANSYGQLGTGNKSNQSYPAPVIVEKDRIIEIAACHSAHTSAAKTQG--------- 328
Query: 142 SRLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 329 GHVYMWGQCRGQSVVLPHLTHFSCTDDVFAC 359
>gi|417411454|gb|JAA52162.1| Putative alpha-tubulin suppressor, partial [Desmodus rotundus]
Length = 534
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 141/304 (46%), Gaps = 39/304 (12%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V + +F +G N LG G + P+K++ L + +KS+S G+ ++ D
Sbjct: 44 VTDNDEVFVFGLNYSNCLGTGDNQSTLIPKKLEALCGKKIKSLSYGSGPHVLLST---ED 100
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQV---SCGSVHVVALSECGL 187
G + + WG N G+ + N +I QV +CGS H VAL+ G
Sbjct: 101 GVV-----YAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSVALAADGE 155
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWGYN GQ+G G T PR + ++++ ++CG+ S AV +NG
Sbjct: 156 VFAWGYNNCGQVGSGSTANQ-PTPRKVTN-------CLHIKRVVGIACGQTSSMAVLDNG 207
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
EVY WG GQLG L + +L P RV AL + + + CG H+ ALT +G LYAW
Sbjct: 208 EVYGWGYNGNGQLG---LGNNVNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAW 264
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRI 366
G + GQLG G + S P + V++ AC +HT + G +
Sbjct: 265 GANTYGQLGTGNKNNLLS--PAHIMVEKERV--------VEIAACHSAHTSAAKTQGGHV 314
Query: 367 HGWG 370
+ WG
Sbjct: 315 YMWG 318
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 114/238 (47%), Gaps = 34/238 (14%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HV+ +E G++ AWG+N Y QLG G T +G+ +V ++++ +V+CG
Sbjct: 93 HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLL--------IKQVVEVACGS 144
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV---ACGGVH 294
+HS A++ +GEV+ WG + GQ+G S + + PR+V + + IK V ACG
Sbjct: 145 HHSVALAADGEVFAWGYNNCGQVGSGSTAN---QPTPRKVT--NCLHIKRVVGIACGQTS 199
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG---VQLVA 351
S A+ G +Y WG + GQLGLG + P+ V V +
Sbjct: 200 SMAVLDNGEVYGWGYNGNGQLGLGNNVNQLT-------------PVRVAALHSVCVNQIV 246
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
CG++HTL +G ++ WG N+YGQ SP V + R + HSA
Sbjct: 247 CGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLL--SPAHIMVEKERVVEIAACHSA 302
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 113/243 (46%), Gaps = 37/243 (15%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG+N Q G G Q P Q+ C + +++ACG H+ A+A+DG
Sbjct: 102 VVYAWGHNGYSQLGN-GTTNQGIAPIQV------CTNLLIKQVVEVACGSHHSVALAADG 154
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+F WG N GQ+G G+ + P KV L + V I+CG + A+ + E
Sbjct: 155 EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGE------ 208
Query: 141 TSRLWVWGQN------QGSNFPRLFWGAFTPNTIIC--QVSCGSVHVVALSECGLLQAWG 192
++ WG N G+N +L +C Q+ CG H +AL++ GLL AWG
Sbjct: 209 ---VYGWGYNGNGQLGLGNNVNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 265
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G L ++ E E++ ++ +C H SAA ++ G VY
Sbjct: 266 ANTYGQLGTGNKNNLLSPAHIM----------VEKERVVEIAACHSAHTSAAKTQGGHVY 315
Query: 251 TWG 253
WG
Sbjct: 316 MWG 318
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 141/334 (42%), Gaps = 46/334 (13%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G +A + ++V+G N+S G G + IPK+L G + L
Sbjct: 33 VFGTSANEALYVTDNDEVFVFGLNYSNCLG-TGDNQSTLIPKKLEA-----LCGKKIKSL 86
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV-KQLQSEFVKSISCGAH 124
G H DG ++ WG N + QLG+GT P +V L + V ++CG+H
Sbjct: 87 SYGSG-PHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSH 145
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQ------GSN----FPRLFWGAFTPNTIICQVSC 174
+ A+A DG + + WG N GS PR ++ ++C
Sbjct: 146 HSVALAA----DGEV-----FAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVV-GIAC 195
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G +A+ + G + WGYN GQLG G L RV ++ + Q+
Sbjct: 196 GQTSSMAVLDNGEVYGWGYNGNGQLGLGNNVNQLTPVRVAALHSVC---------VNQIV 246
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGG 292
CG H+ A+++ G +Y WG + GQLG +G+K L P ++ ++ AC
Sbjct: 247 CGYAHTLALTDEGLLYAWGANTYGQLG-----TGNKNNLLSPAHIMVEKERVVEIAACHS 301
Query: 293 VH-SCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
H S A T G +Y WG + GQ + P S
Sbjct: 302 AHTSAAKTQGGHVYMWGQCR-GQSVILPHLTHLS 334
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 81/173 (46%), Gaps = 17/173 (9%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHSCALT 299
V++N EV+ +GL LG +GD + L+P+++ AL G IK ++ G G H T
Sbjct: 44 VTDNDEVFVFGLNYSNCLG-----TGDNQSTLIPKKLEALCGKKIKSLSYGSGPHVLLST 98
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
G +YAWG + QLG G + + I ++ + V VACG H++
Sbjct: 99 EDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQ---------VVEVACGSHHSVA 149
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
DG + WGYN+ GQ + + P V C+ R + G ++ +A
Sbjct: 150 LAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMA 202
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 22/152 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLD-IACGHEHTAAVASDG 81
+Y WGYN +GQ G QL P ++ A +S ++ I CG+ HT A+ +G
Sbjct: 209 VYGWGYNGNGQLGLGNNVNQLT-PVRV--------AALHSVCVNQIVCGYAHTLALTDEG 259
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIS 140
L+ WGAN +GQLG G + P + + V+ +C AH +AA +
Sbjct: 260 LLYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQ--------- 310
Query: 141 TSRLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 311 GGHVYMWGQCRGQSVILPHLTHLSCTDDVFAC 342
>gi|345795045|ref|XP_544717.3| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1 isoform 1 [Canis lupus familiaris]
Length = 4861
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 195/430 (45%), Gaps = 70/430 (16%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
MD + T+RP D ++ K +Y+WG GQ GR + +P P
Sbjct: 3976 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMVPAAAP--------- 4024
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
+ S+ + CG T + ++GT+ G +G+LG G + + LQ V +
Sbjct: 4025 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQL 4084
Query: 120 --SCGAH-CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI---- 168
SCG+ + A+ E E ++ WG ++ +L G P I
Sbjct: 4085 VTSCGSDGHSMALTESGE---------VFSWGDG---DYGKLGHGNSDRQRRPRQIEALQ 4132
Query: 169 ---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV--IKGYAKFLDE 223
+ Q+SCG H ++ G L +G +YG+LG G T RV ++GY
Sbjct: 4133 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY------ 4186
Query: 224 APELEKITQVSCGEYHSAAVSENGE-VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG 282
+I QV+CG H+ AVS +G V+ +G G G+LG L + + P++V L G
Sbjct: 4187 -----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCG 4238
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL- 341
I IK VACG S ALT G +Y +G Q +GL P+ R+ + + IP+L
Sbjct: 4239 IGIKKVACGTQFSVALTKDGHVYTFG--QDRLIGL-PEGRA------RNHNRPQQIPVLA 4289
Query: 342 -VVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VR 399
VV ++ VA G HTL G ++ WG NS GQ + + P+ V G+ +R
Sbjct: 4290 GVV---IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIR 4346
Query: 400 KLAAGGGHSA 409
+++AG HSA
Sbjct: 4347 QISAGRCHSA 4356
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 180/405 (44%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ PK A + S I G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQ-PKM---------ALSFSDAQTIEAGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG----T 138
+ G +G+LG G + +K+L E +SI ++ + +DG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQS---TLKKLTFEPHRSIK-------KVSSSKGSDGHTLAF 473
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ ++ WG + +P+L G ++C VS G H A++E G L
Sbjct: 474 TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGEL 532
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G P ++K ++ + +VSCG H+ A+S++G
Sbjct: 533 YTWGEGDFGRLGHG-DSNSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 581
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ V AL G+FI+ V G S ALTS G +Y
Sbjct: 582 TVWSFGGGDNGKLGH-----GDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVY 636
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V ++ G S L D
Sbjct: 637 AWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-ISIGDSXCLALRHDNE 685
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 143/307 (46%), Gaps = 43/307 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V SDG
Sbjct: 4103 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTSDGK 4154
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG++
Sbjct: 4155 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA----DGSM--- 4207
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNT------IIC-----QVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T + ++C +V+CG+ VAL++ G + +
Sbjct: 4208 -VWAFGDG---DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4263
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ I A + I V+ G H+ A++ G+VY
Sbjct: 4264 GQDRLIGLPEG-RARNHNRPQQIPVLAGVV--------IEDVAVGAEHTLALASTGDVYA 4314
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWGGS 310
WG S GQLG L + P V L G I+ ++ G HS A T+ A G S
Sbjct: 4315 WGSNSEGQLG---LGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPVPPRAPGVS 4371
Query: 311 QAGQLGL 317
QLGL
Sbjct: 4372 VPLQLGL 4378
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 132/289 (45%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P + I +V GS +AL+ G + AW
Sbjct: 583 -VWSFG---GGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I +S G+ A+ + EVY
Sbjct: 639 GCG--ACLGCGSSEATALRPKLIEELAA--------TRIVDISIGDSXCLALRHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDGI I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 30/228 (13%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +GQL G V+ A AP + QV CG+ + + NG V
Sbjct: 4002 WGAGRHGQLAEA-------GRNVMVPAA-----APSFSQAQQVICGQNCTFVIQANGTVL 4049
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGALYAW 307
G GS G+LG + S D +L + AL G + + +CG HS ALT G +++W
Sbjct: 4050 ACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSW 4106
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G R R I L VQ+ +CG H+ V DG++
Sbjct: 4107 GDGDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLF 4156
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
+G YG+ ++ P V G ++ ++A G H+ AV AD
Sbjct: 4157 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 4204
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 14/173 (8%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VSE EVY WG S QL G +E + + +AL + + G + +++ G
Sbjct: 368 VSETCEVYVWGSNSSHQLVE-----GTQEKILQPKMALSFSDAQTIEAGQYCTFVISTDG 422
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ A G G+LGLG +L + + R+I + G HTL +
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RSIKKVSSSKG------SDGHTLAFTT 475
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+G + WG YG+ + S+ YP + + G+V ++AG HSA + +
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
>gi|224053260|ref|XP_002297742.1| predicted protein [Populus trichocarpa]
gi|222845000|gb|EEE82547.1| predicted protein [Populus trichocarpa]
Length = 1063
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 160/352 (45%), Gaps = 60/352 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
IACG +H A V G +F+WG G+LG G + HP+ V L++ V+ ++CG + +
Sbjct: 276 IACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKFVDGLKNFNVELVACGEYLS 335
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGA----FTPNTI--------ICQVSC 174
A+ T+S L++WG N NF L G+ + P + + VSC
Sbjct: 336 CAV--------TLSGD-LYIWGGN-AYNFGLLGCGSEATQWVPRKLSGPLEGIHVSSVSC 385
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G H ++ G L +G +G LG G + PR ++ + +V+
Sbjct: 386 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDR-SSVSTPREVESLKGL--------RTMRVA 436
Query: 235 CGEYHSAAVSE------------NGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVAL 280
CG +H+AAV E +G+++TWG G G+LGH GDKE L+P V L
Sbjct: 437 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGH-----GDKEARLVPTYVATL 491
Query: 281 DGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI 340
VACG + ALT+ G +Y G GQLG PQ + +P +
Sbjct: 492 VEPSFCQVACGHSLTVALTTSGQVYTMGSPVYGQLG-NPQ--ADGKVPTRVEGK------ 542
Query: 341 LVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVD 392
++ N V+ +ACG H V ++ WG + G+ + + +PS V+
Sbjct: 543 -LMKNFVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSIVE 593
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 92/195 (47%), Gaps = 17/195 (8%)
Query: 223 EAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL-PRRVVALD 281
E+ L + ++CG H+A V++ GEV++WG G+LGH D ++ P+ V L
Sbjct: 266 ESAVLLDVQAIACGRQHAALVTKQGEVFSWGEELGGRLGH----GVDSDVSHPKFVDGLK 321
Query: 282 GIFIKDVACGGVHSCALTSKGALYAWGGS--QAGQLGLGPQTRSFSLIPNESDTYFRNIP 339
++ VACG SCA+T G LY WGG+ G LG G + + +P + I
Sbjct: 322 NFNVELVACGEYLSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQW--VPRKLSGPLEGI- 378
Query: 340 ILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EV 398
V V+CG HT V G++ +G ++G + + P V+ G
Sbjct: 379 ------HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRSSVSTPREVESLKGLRT 432
Query: 399 RKLAAGGGHSAVLAD 413
++A G H+A + +
Sbjct: 433 MRVACGVWHTAAVVE 447
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 84/197 (42%), Gaps = 30/197 (15%)
Query: 63 RWLDIACGHEHTAAVA------------SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQ 110
R + +ACG HTAAV S G LFTWG + G+LG G +E R P V
Sbjct: 431 RTMRVACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKEARLVPTYVAT 490
Query: 111 LQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQ----NQGSNFPRLFWGAFTPN 166
L ++CG T A+ G + T V+GQ P G N
Sbjct: 491 LVEPSFCQVACGHSLTVALT----TSGQVYTMGSPVYGQLGNPQADGKVPTRVEGKLMKN 546
Query: 167 TIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPE 226
+ +++CG+ HV L+ + WG G+LG G T + P ++ EA +
Sbjct: 547 -FVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGDT-DDRNFPSIV--------EALK 596
Query: 227 LEKITQVSCGEYHSAAV 243
+++ + CG +AA+
Sbjct: 597 DKQVKGIICGTSFTAAI 613
>gi|149042013|gb|EDL95854.1| rCG58270 [Rattus norvegicus]
Length = 3507
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 195/430 (45%), Gaps = 70/430 (16%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
MD + T+RP D ++ K +Y+WG GQ GR + +P P
Sbjct: 2622 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMVPATAP--------- 2670
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
+ S+ + CG T + ++GT+ G +G+LG G + + LQ V +
Sbjct: 2671 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQL 2730
Query: 120 --SCGAH-CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI---- 168
SCG+ + A+ E E ++ WG ++ +L G P I
Sbjct: 2731 VTSCGSDGHSMALTESGE---------VFSWGDG---DYGKLGHGNSDRQRRPRQIEALQ 2778
Query: 169 ---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV--IKGYAKFLDE 223
+ Q+SCG H ++ G L +G +YG+LG G T RV ++GY
Sbjct: 2779 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY------ 2832
Query: 224 APELEKITQVSCGEYHSAAVSENGE-VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG 282
+I QV+CG H+ AVS +G V+ +G G G+LG L + + P++V L G
Sbjct: 2833 -----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCG 2884
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL- 341
I IK VACG S ALT G +Y +G Q +GL P+ R+ + + IP+L
Sbjct: 2885 IGIKKVACGTQFSVALTKDGHVYTFG--QDRLIGL-PEGRA------RNHNRPQQIPVLA 2935
Query: 342 -VVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VR 399
VV ++ VA G HTL G ++ WG NS GQ + + P+ V G+ +R
Sbjct: 2936 GVV---IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIR 2992
Query: 400 KLAAGGGHSA 409
+++AG HSA
Sbjct: 2993 QISAGRCHSA 3002
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 143/307 (46%), Gaps = 43/307 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V SDG
Sbjct: 2749 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTSDGK 2800
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG++
Sbjct: 2801 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA----DGSM--- 2853
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNT------IIC-----QVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T + ++C +V+CG+ VAL++ G + +
Sbjct: 2854 -VWAFGDG---DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 2909
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ I A + I V+ G H+ A++ G+VY
Sbjct: 2910 GQDRLIGLPEG-RARNHNRPQQIPVLAGVV--------IEDVAVGAEHTLALASTGDVYA 2960
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWGGS 310
WG S GQLG L + P V L G I+ ++ G HS A T+ A G S
Sbjct: 2961 WGSNSEGQLG---LGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPVPPRAPGVS 3017
Query: 311 QAGQLGL 317
QLGL
Sbjct: 3018 VPLQLGL 3024
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 98/231 (42%), Gaps = 36/231 (15%)
Query: 191 WGYNEYGQL---GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
WG +GQL GR + AP + QV CG+ + + NG
Sbjct: 2648 WGAGRHGQLAEAGRNVMVPA---------------TAPSFSQAQQVICGQNCTFVIQANG 2692
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGAL 304
V G GS G+LG + S D +L + AL G + + +CG HS ALT G +
Sbjct: 2693 TVLACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEV 2749
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 364
++WG G+LG G R R I L VQ+ +CG H+ V DG
Sbjct: 2750 FSWGDGDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDG 2799
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
++ +G YG+ ++ P V G ++ ++A G H+ AV AD
Sbjct: 2800 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 2850
>gi|390333856|ref|XP_788386.3| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Strongylocentrotus purpuratus]
Length = 782
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 153/336 (45%), Gaps = 69/336 (20%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE-- 134
+ +G L+ +GAN++GQLG G + P VK L+ V I+CG T A+ + R
Sbjct: 45 ITENGRLYVFGANDWGQLGLGHRKSVNKPSSVKGLKHAGVVKIACGRVHTIALTKDRHLH 104
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
+ G +L V G ++ PR+ + ++ +SCG+ H AL+ G L WG
Sbjct: 105 SFGAGGEGQLGV-GDSKQYEAPRMIEELEEQDYLL--LSCGTDHSAALTASGTLYMWGGG 161
Query: 195 EYGQLGRGITCEGLQGPRVIK----------GY--AKFLDEAPEL--------------- 227
GQLG G E +Q PR + GY L E +L
Sbjct: 162 SEGQLGHGEDTE-VQIPRELSMGVPVRMVSCGYYHTALLTEDKKLYTFGEGEGGKLGLGE 220
Query: 228 ----------------EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
E + VSCG H+AA++E G VYT+G G+ GQLGH G
Sbjct: 221 AHLGGVNEPQHVSFFTEPVDSVSCGNAHTAAITEKGHVYTFGNGASGQLGH-----GPDH 275
Query: 272 L---LPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIP 328
L +P+RV L+ K V+CG H+ +T+KG LY +G + G+LG G ++ S P
Sbjct: 276 LETNIPKRVARLEWTRCKWVSCGDCHTAIVTAKGCLYTFGDGRHGKLGQGEESFSNVFTP 335
Query: 329 NESDTYFRNIPILVVPNG--VQLVACGHSHTLVYMR 362
++ + NG V+ V+CG HTLV R
Sbjct: 336 SKVHRF----------NGFLVEEVSCGGCHTLVRAR 361
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 120/259 (46%), Gaps = 65/259 (25%)
Query: 143 RLWVWGQNQGSNFPRLFWGAF---------TPNTI-------ICQVSCGSVHVVALSECG 186
RL+V+G N WG P+++ + +++CG VH +AL++
Sbjct: 50 RLYVFGAND--------WGQLGLGHRKSVNKPSSVKGLKHAGVVKIACGRVHTIALTKDR 101
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
L ++G GQLG G + + + PR+I E E + +SCG HSAA++ +
Sbjct: 102 HLHSFGAGGEGQLGVGDSKQ-YEAPRMI--------EELEEQDYLLLSCGTDHSAALTAS 152
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
G +Y WG GS GQLGH D E+ R +++ G+ ++ V+CG H+ LT LY
Sbjct: 153 GTLYMWGGGSEGQLGHGE----DTEVQIPRELSM-GVPVRMVSCGYYHTALLTEDKKLYT 207
Query: 307 WGGSQAGQLG-----LG----PQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT 357
+G + G+LG LG PQ SF P V V+CG++HT
Sbjct: 208 FGEGEGGKLGLGEAHLGGVNEPQHVSFFTEP------------------VDSVSCGNAHT 249
Query: 358 LVYMRDGRIHGWGYNSYGQ 376
G ++ +G + GQ
Sbjct: 250 AAITEKGHVYTFGNGASGQ 268
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 82/183 (44%), Gaps = 20/183 (10%)
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
+ ++ENG +Y +G GQLG +S +K P V L + +ACG VH+ A
Sbjct: 40 FFDVVITENGRLYVFGANDWGQLGLGHRKSVNK---PSSVKGLKHAGVVKIACGRVHTIA 96
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ---LVACGH 354
LT L+++G GQLG+G D+ P ++ Q L++CG
Sbjct: 97 LTKDRHLHSFGAGGEGQLGVG-------------DSKQYEAPRMIEELEEQDYLLLSCGT 143
Query: 355 SHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADA 414
H+ G ++ WG S GQ + + T P + V VR ++ G H+A+L +
Sbjct: 144 DHSAALTASGTLYMWGGGSEGQLGHGEDTEVQIPRELSMGV-PVRMVSCGYYHTALLTED 202
Query: 415 CSL 417
L
Sbjct: 203 KKL 205
>gi|296196028|ref|XP_002745648.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Callithrix jacchus]
Length = 1024
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 117/250 (46%), Gaps = 28/250 (11%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I Q++CG H +ALS+ G L AWG N +GQLG G P++++ A
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTAPQIVEHLAGI-------- 191
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
+ Q+S GE HS A+S +G +Y+WG GQLG +S D P + ALD ++ +
Sbjct: 192 PLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDS---PSLIEALDNQKVEFL 248
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---N 345
ACGG H+ LT G L+ +G + GQLG N + R P LV N
Sbjct: 249 ACGGSHTALLTQDGLLFTFGAGKHGQLG-----------HNSTQNELR--PCLVAELAGN 295
Query: 346 GVQLVACGHSHTLVYMRD-GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAG 404
V +ACG HTL Y+ D G++ +G GQ N + P P+ E K +
Sbjct: 296 RVTQIACGRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTRDQLIPLPMKVSSNEDLKFESH 355
Query: 405 GGHSAVLADA 414
++ A
Sbjct: 356 TSEKELIMIA 365
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 92/185 (49%), Gaps = 19/185 (10%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+KI Q++CG+YHS A+S+ GE++ WG GQLG + P+ V L GI +
Sbjct: 138 KKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG--RKFPSTTAPQIVEHLAGIPLAQ 195
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP--- 344
++ G HS AL+ G +Y+WG ++ GQLGL T ++ P L+
Sbjct: 196 ISAGEAHSMALSMSGNIYSWGKNEFGQLGL-------------DHTESKDSPSLIEALDN 242
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAA 403
V+ +ACG SHT + +DG + +G +GQ + + P V G V ++A
Sbjct: 243 QKVEFLACGGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIAC 302
Query: 404 GGGHS 408
G H+
Sbjct: 303 GRWHT 307
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 32/213 (15%)
Query: 62 SRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSIS 120
+ + I CG H+ A++ G LF WG N GQLG G + P+ V+ L + IS
Sbjct: 138 KKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTAPQIVEHLAGIPLAQIS 197
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQN----------QGSNFPRLFWGAFTPNTIIC 170
G + A++ + ++ WG+N + + P L N +
Sbjct: 198 AGEAHSMALS---------MSGNIYSWGKNEFGQLGLDHTESKDSPSLIEA--LDNQKVE 246
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
++CG H L++ GLL +G ++GQLG T L+ P ++ A ++
Sbjct: 247 FLACGGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELR-PCLVAELAG--------NRV 297
Query: 231 TQVSCGEYHSAA-VSENGEVYTWGLGSVGQLGH 262
TQ++CG +H+ A VS+ G+V+++G G GQLG+
Sbjct: 298 TQIACGRWHTLAYVSDLGKVFSFGSGKEGQLGN 330
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 15/190 (7%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G GR+ Q+ L G P I+ G H+ A++ G
Sbjct: 159 LFAWGQNLHGQLG-VGRKFPSTTAPQIVEHLAGIPLA------QISAGEAHSMALSMSGN 211
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST- 141
+++WG NEFGQLG E + P ++ L ++ V+ ++CG TA + + DG + T
Sbjct: 212 IYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSHTALLTQ----DGLLFTF 267
Query: 142 --SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYNEYGQ 198
+ G N N R A + Q++CG H +A +S+ G + ++G + GQ
Sbjct: 268 GAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWHTLAYVSDLGKVFSFGSGKEGQ 327
Query: 199 LGRGITCEGL 208
LG G T + L
Sbjct: 328 LGNGGTRDQL 337
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 61/136 (44%), Gaps = 14/136 (10%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD-G 81
++ +G GQ G + +LR P L AG +R IACG HT A SD G
Sbjct: 264 LFTFGAGKHGQLGHNSTQNELR------PCLVAELAG--NRVTQIACGRWHTLAYVSDLG 315
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F++G+ + GQLG+G + P +K +E +K S + I EN +
Sbjct: 316 KVFSFGSGKEGQLGNGGTRDQLIPLPMKVSSNEDLKFESHTSE-KELIMIAGENQSIL-- 372
Query: 142 SRLWVWGQNQGSNFPR 157
LW+ +N N R
Sbjct: 373 --LWIKKENSYVNLRR 386
>gi|301117542|ref|XP_002906499.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262107848|gb|EEY65900.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 1711
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 142/308 (46%), Gaps = 40/308 (12%)
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
+ G L++ G N +G+LG G + R + + ++ ++ G A + NDG
Sbjct: 319 ASGELYSCGQNSYGELGTGDDIERHQLTSISLCGWDDIRQVASGNETLAVLT----NDGV 374
Query: 139 ISTSRLWVWGQNQGSNFP------RLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
+ T L GQ +F R + S G H++AL++ GL +WG
Sbjct: 375 VLTCGLNKSGQCGQGHFDERVMMLRPVQALRSQRVKFIAASNGCEHMIALTDSGLAYSWG 434
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
YN+ GQLG + P++I E+ + +K+ S +HSA ++++GE+Y +
Sbjct: 435 YNDRGQLGHENLTTKVHVPKLI--------ESLKDKKLRYASVSYHHSAVITDSGELYAF 486
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G+ GQLG L + P+ V +G I VACG H+ T+ G L+A G +
Sbjct: 487 GMNDCGQLG---LDHTQHQSTPQLVKGFEGTEISMVACGLYHTIICTATGGLFACGKNDY 543
Query: 313 GQLGLG--PQTRSFSLI--PNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHG 368
GQLGLG Q + SL+ PNE +Y VA G+ H++V GR
Sbjct: 544 GQLGLGHNRQIKVASLVSLPNEMVSY---------------VASGYYHSVVVTNSGRTFS 588
Query: 369 WGYNSYGQ 376
+G N YGQ
Sbjct: 589 FGRNDYGQ 596
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 176/410 (42%), Gaps = 66/410 (16%)
Query: 64 WLDI---ACGHEHTAAVASDGTLFTWGANEFGQLGDG-TEEGRKHPEKVKQLQSEFVKSI 119
W DI A G+E A + +DG + T G N+ GQ G G +E V+ L+S+ VK I
Sbjct: 353 WDDIRQVASGNETLAVLTNDGVVLTCGLNKSGQCGQGHFDERVMMLRPVQALRSQRVKFI 412
Query: 120 SCGAHCTAAIAEPRENDGTISTSRL-WVWGQNQGSNF--PRLFWGAFTPNTI-------I 169
+ C IA ++ S L + WG N L P I +
Sbjct: 413 AASNGCEHMIA--------LTDSGLAYSWGYNDRGQLGHENLTTKVHVPKLIESLKDKKL 464
Query: 170 CQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK 229
S H +++ G L A+G N+ GQLG T + P+++KG+ E +
Sbjct: 465 RYASVSYHHSAVITDSGELYAFGMNDCGQLGLDHT-QHQSTPQLVKGF--------EGTE 515
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
I+ V+CG YH+ + G ++ G GQLG ++++ +V+L + VA
Sbjct: 516 ISMVACGLYHTIICTATGGLFACGKNDYGQLG----LGHNRQIKVASLVSLPNEMVSYVA 571
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
G HS +T+ G +++G + GQLG+G N+ N+ L +
Sbjct: 572 SGYYHSVVVTNSGRTFSFGRNDYGQLGIG----------NKVHQNVPNVVALSANTRMVR 621
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDW--------CVGEVRKL 401
CG HT++ G++ +G N+ GQ N S A P P+ CV +
Sbjct: 622 ATCGCYHTVLLSEQGQVFVFGRNNKGQLGNRGSADALLPVPLKVRPEKNSRRCV----DV 677
Query: 402 AAGGGHSAVL---------ADACSLKELCEFRLAESVTLSNASEIEDVAS 442
AAG ++++ +D+ L++ C + V + + EIE +++
Sbjct: 678 AAGFYTTSLIVERKRDNDESDSIMLEQSCVISVCGRVDIDRSGEIEGLSN 727
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 111/246 (45%), Gaps = 32/246 (13%)
Query: 24 YVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTL 83
Y WGYN GQ G + ++ +PK L R+ ++ + H+A + G L
Sbjct: 431 YSWGYNDRGQLGHENLTTKVHVPK-----LIESLKDKKLRYASVS--YHHSAVITDSGEL 483
Query: 84 FTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH----CTAA---IAEPREND 136
+ +G N+ GQLG + + P+ VK + + ++CG + CTA A + +
Sbjct: 484 YAFGMNDCGQLGLDHTQHQSTPQLVKGFEGTEISMVACGLYHTIICTATGGLFACGKNDY 543
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
G + G N+ L PN ++ V+ G H V ++ G ++G N+Y
Sbjct: 544 GQLG------LGHNRQIKVASL---VSLPNEMVSYVASGYYHSVVVTNSGRTFSFGRNDY 594
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG G P V+ A ++ + +CG YH+ +SE G+V+ +G +
Sbjct: 595 GQLGIGNKVHQ-NVPNVVALSAN--------TRMVRATCGCYHTVLLSEQGQVFVFGRNN 645
Query: 257 VGQLGH 262
GQLG+
Sbjct: 646 KGQLGN 651
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 22/134 (16%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPK--QLPPELFGCPAGANSRWLDIACGHEHTAA 76
A ++ G N GQ G G RQ+++ LP E+ +A G+ H+
Sbjct: 531 ATGGLFACGKNDYGQLGL-GHNRQIKVASLVSLPNEMVSY----------VASGYYHSVV 579
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V + G F++G N++GQLG G + + P V + + +CG + T ++E
Sbjct: 580 VTNSGRTFSFGRNDYGQLGIGNKVHQNVPNVVALSANTRMVRATCGCYHTVLLSE----- 634
Query: 137 GTISTSRLWVWGQN 150
+++V+G+N
Sbjct: 635 ----QGQVFVFGRN 644
>gi|402902028|ref|XP_003913931.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 2
[Papio anubis]
Length = 355
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 141/304 (46%), Gaps = 39/304 (12%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V D +F +G N LG G + P+K++ L + +KS+S G+ ++ D
Sbjct: 37 VTDDDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLSGKKIKSLSYGSGPHVLLST---ED 93
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQV---SCGSVHVVALSECGL 187
G + + WG N G+ + N +I QV +CGS H +AL+ G
Sbjct: 94 GVV-----YAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGE 148
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWGYN GQ+G G T PR + ++++ ++CG+ S AV +NG
Sbjct: 149 VFAWGYNNCGQVGSGSTANQ-PTPRKVT-------NCLHIKRVVGIACGQTSSMAVLDNG 200
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
EVY WG GQLG L + +L P RV AL + + + CG H+ ALT +G LYAW
Sbjct: 201 EVYGWGYNGNGQLG---LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAW 257
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRI 366
G + GQLG G + S P + V++ AC +HT + G +
Sbjct: 258 GANTYGQLGTGNKNNLLS--PAHIMVEKERV--------VEIAACHSAHTSAAKTQGGHV 307
Query: 367 HGWG 370
+ WG
Sbjct: 308 YMWG 311
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 117/233 (50%), Gaps = 29/233 (12%)
Query: 148 GQNQGSNFPRLFWGAFTPNTIICQVSCGS-VHVVALSECGLLQAWGYNEYGQLGRGITCE 206
G NQ + P+ G I +S GS HV+ +E G++ AWG+N Y QLG G T +
Sbjct: 57 GDNQSTLVPKKLEG--LSGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQ 114
Query: 207 GLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQ 266
G+ +V ++++ +V+CG +HS A++ +GEV+ WG + GQ+G S
Sbjct: 115 GIAPIQVCTNLL--------IKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTA 166
Query: 267 SGDKELLPRRVVALDGIFIKDV---ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRS 323
+ + PR+V + + IK V ACG S A+ G +Y WG + GQLGLG
Sbjct: 167 N---QPTPRKVT--NCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ 221
Query: 324 FSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
T R + V V + CG++HTL +G ++ WG N+YGQ
Sbjct: 222 L--------TPVRVAALHSVC--VNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 113/243 (46%), Gaps = 37/243 (15%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG+N Q G G Q P Q+ L + +++ACG H+ A+A+DG
Sbjct: 95 VVYAWGHNGYSQLGN-GTTNQGIAPIQVCTNLL------IKQVVEVACGSHHSMALAADG 147
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+F WG N GQ+G G+ + P KV L + V I+CG + A+ + E
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGE------ 201
Query: 141 TSRLWVWGQN------QGSNFPRLFWGAFTPNTIIC--QVSCGSVHVVALSECGLLQAWG 192
++ WG N G+N +L +C Q+ CG H +AL++ GLL AWG
Sbjct: 202 ---VYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G L ++ E E++ ++ +C H SAA ++ G VY
Sbjct: 259 ANTYGQLGTGNKNNLLSPAHIMV----------EKERVVEIAACHSAHTSAAKTQGGHVY 308
Query: 251 TWG 253
WG
Sbjct: 309 MWG 311
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 141/334 (42%), Gaps = 46/334 (13%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G +A + ++V+G N+S G G + +PK+L +G + L
Sbjct: 26 VFGTSASEALYVTDDDEVFVFGLNYSNCLG-TGDNQSTLVPKKLEGL-----SGKKIKSL 79
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV-KQLQSEFVKSISCGAH 124
G H DG ++ WG N + QLG+GT P +V L + V ++CG+H
Sbjct: 80 SYGSG-PHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSH 138
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQ------GSN----FPRLFWGAFTPNTIICQVSC 174
+ A+A E ++ WG N GS PR ++ ++C
Sbjct: 139 HSMALAADGE---------VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVV-GIAC 188
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G +A+ + G + WGYN GQLG G L RV A + Q+
Sbjct: 189 GQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRV---------AALHSVCVNQIV 239
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGG 292
CG H+ A+++ G +Y WG + GQLG +G+K L P ++ ++ AC
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLG-----TGNKNNLLSPAHIMVEKERVVEIAACHS 294
Query: 293 VH-SCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
H S A T G +Y WG + GQ + P FS
Sbjct: 295 AHTSAAKTQGGHVYMWGQCR-GQSVILPHLTHFS 327
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 80/173 (46%), Gaps = 17/173 (9%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHSCALT 299
V+++ EV+ +GL LG +GD + L+P+++ L G IK ++ G G H T
Sbjct: 37 VTDDDEVFVFGLNYSNCLG-----TGDNQSTLVPKKLEGLSGKKIKSLSYGSGPHVLLST 91
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
G +YAWG + QLG G + + I ++ + V VACG H++
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQ---------VVEVACGSHHSMA 142
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
DG + WGYN+ GQ + + P V C+ R + G ++ +A
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMA 195
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 20/151 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WGYN +GQ G QL P ++ C I CG+ HT A+ +G
Sbjct: 202 VYGWGYNGNGQLGLGNNGNQLT-PVRVAALHSVCVN-------QIVCGYAHTLALTDEGL 253
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
L+ WGAN +GQLG G + P + + V+ +C AH +AA +
Sbjct: 254 LYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQG--------- 304
Query: 142 SRLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 305 GHVYMWGQCRGQSVILPHLTHFSCTDDVFAC 335
>gi|392350138|ref|XP_236362.6| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
norvegicus]
Length = 4859
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 195/430 (45%), Gaps = 70/430 (16%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
MD + T+RP D ++ K +Y+WG GQ GR + +P P
Sbjct: 3974 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMVPATAP--------- 4022
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
+ S+ + CG T + ++GT+ G +G+LG G + + LQ V +
Sbjct: 4023 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQL 4082
Query: 120 --SCGAH-CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI---- 168
SCG+ + A+ E E ++ WG ++ +L G P I
Sbjct: 4083 VTSCGSDGHSMALTESGE---------VFSWGDG---DYGKLGHGNSDRQRRPRQIEALQ 4130
Query: 169 ---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV--IKGYAKFLDE 223
+ Q+SCG H ++ G L +G +YG+LG G T RV ++GY
Sbjct: 4131 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY------ 4184
Query: 224 APELEKITQVSCGEYHSAAVSENGE-VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG 282
+I QV+CG H+ AVS +G V+ +G G G+LG L + + P++V L G
Sbjct: 4185 -----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCG 4236
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL- 341
I IK VACG S ALT G +Y +G Q +GL P+ R+ + + IP+L
Sbjct: 4237 IGIKKVACGTQFSVALTKDGHVYTFG--QDRLIGL-PEGRA------RNHNRPQQIPVLA 4287
Query: 342 -VVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VR 399
VV ++ VA G HTL G ++ WG NS GQ + + P+ V G+ +R
Sbjct: 4288 GVV---IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIR 4344
Query: 400 KLAAGGGHSA 409
+++AG HSA
Sbjct: 4345 QISAGRCHSA 4354
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 181/405 (44%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ P+L P+ ++++ I G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQ------PKL--APSFSDAQ--TIEAGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA----HCTAAIAEPRENDGT 138
+ G +G+LG G + +K+ +K +S H A E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE------- 476
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG + +P+L G ++C VS G H A++E G L
Sbjct: 477 ---GEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGEL 532
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G + P ++K ++ + +VSCG H+ A+S++G
Sbjct: 533 YTWGEGDFGRLGHGDS-NSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 581
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ + AL G+FI+ V G S ALTS G +Y
Sbjct: 582 TVWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVY 636
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V ++ G SH L D
Sbjct: 637 AWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-ISIGDSHCLSLSHDNE 685
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 143/307 (46%), Gaps = 43/307 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V SDG
Sbjct: 4101 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTSDGK 4152
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG++
Sbjct: 4153 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA----DGSM--- 4205
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNT------IIC-----QVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T + ++C +V+CG+ VAL++ G + +
Sbjct: 4206 -VWAFGDG---DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4261
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ I A + I V+ G H+ A++ G+VY
Sbjct: 4262 GQDRLIGLPEG-RARNHNRPQQIPVLAGVV--------IEDVAVGAEHTLALASTGDVYA 4312
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWGGS 310
WG S GQLG L + P V L G I+ ++ G HS A T+ A G S
Sbjct: 4313 WGSNSEGQLG---LGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPVPPRAPGVS 4369
Query: 311 QAGQLGL 317
QLGL
Sbjct: 4370 VPLQLGL 4376
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P I I +V GS +AL+ G + AW
Sbjct: 583 -VWSFG---GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I +S G+ H ++S + EVY
Sbjct: 639 GCG--ACLGCGSSEATALRPKLIEELAA--------TRIVDISIGDSHCLSLSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDGI I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 98/231 (42%), Gaps = 36/231 (15%)
Query: 191 WGYNEYGQL---GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
WG +GQL GR + AP + QV CG+ + + NG
Sbjct: 4000 WGAGRHGQLAEAGRNVMVPA---------------TAPSFSQAQQVICGQNCTFVIQANG 4044
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGAL 304
V G GS G+LG + S D +L + AL G + + +CG HS ALT G +
Sbjct: 4045 TVLACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEV 4101
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 364
++WG G+LG G R R I L VQ+ +CG H+ V DG
Sbjct: 4102 FSWGDGDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDG 4151
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
++ +G YG+ ++ P V G ++ ++A G H+ AV AD
Sbjct: 4152 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 4202
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VSE EVY WG S QL G +E + + +A + + G + +++ G
Sbjct: 368 VSETCEVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ A G G+LGLG +L + + R+I + G HTL +
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RSIKKVSSSKG------SDGHTLAFTT 475
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+G + WG YG+ + S+ YP + + G+V ++AG HSA + +
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
>gi|348506950|ref|XP_003441020.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like
[Oreochromis niloticus]
Length = 651
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 142/298 (47%), Gaps = 39/298 (13%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F +G N LG G P+K+ L+ + V S+S G+ +A +DG
Sbjct: 163 VFVFGLNCSSCLGTGDGLSTVMPKKLDFLRGKKVASLSYGSGPHVLLAT---DDG----- 214
Query: 143 RLWVWGQN------QGSNFPRL---FWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
+L+ WG N GS P L A N + +VSCGS H +AL+ G + AWGY
Sbjct: 215 QLFAWGHNGYSQLGNGSTNPGLSPVLITANLQNKKVKEVSCGSHHSMALTLDGEVFAWGY 274
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
N GQ+G G T PR + G + + + ++CG+ S A+ +NGEVY WG
Sbjct: 275 NNCGQIGSGSTANQPY-PRKVTG-------CLQGKNASGITCGQTSSMALVDNGEVYGWG 326
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
GQLG + + +L P RV AL G+ I+ + G H ALT KG LYAWG + G
Sbjct: 327 YNGNGQLG---IGNNGNQLTPCRVAALQGMCIQQIVSGYGHCLALTDKGLLYAWGANTYG 383
Query: 314 QLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRIHGWG 370
QLG G ++ S + +D V++ AC +HT + G++ WG
Sbjct: 384 QLGTGTKSNHLSPVHIMADK----------ERVVEVAACHSTHTSAAKTQSGQVFMWG 431
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 108/235 (45%), Gaps = 30/235 (12%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HV+ ++ G L AWG+N Y QLG G T GL P +I + +K+ +VSCG
Sbjct: 206 HVLLATDDGQLFAWGHNGYSQLGNGSTNPGLS-PVLITANL-------QNKKVKEVSCGS 257
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHSC 296
+HS A++ +GEV+ WG + GQ+G S + + PR+V L G + CG S
Sbjct: 258 HHSMALTLDGEVFAWGYNNCGQIGSGSTAN---QPYPRKVTGCLQGKNASGITCGQTSSM 314
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLVACG 353
AL G +Y WG + GQLG+G + P V +Q + G
Sbjct: 315 ALVDNGEVYGWGYNGNGQLGIGNNGNQLT-------------PCRVAALQGMCIQQIVSG 361
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
+ H L G ++ WG N+YGQ T + + SPV + R + HS
Sbjct: 362 YGHCLALTDKGLLYAWGANTYGQLGT--GTKSNHLSPVHIMADKERVVEVAACHS 414
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 129/315 (40%), Gaps = 41/315 (13%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G TA I + ++V+G N S G G +PK+L G L
Sbjct: 146 VFGTTANEAIYITHGNEVFVFGLNCSSCLG-TGDGLSTVMPKKLD-----FLRGKKVASL 199
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAH 124
G H DG LF WG N + QLG+G+ P + LQ++ VK +SCG+H
Sbjct: 200 SYGSG-PHVLLATDDGQLFAWGHNGYSQLGNGSTNPGLSPVLITANLQNKKVKEVSCGSH 258
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQ------GSN----FPRLFWGAFTPNTIICQVSC 174
+ A+ E ++ WG N GS +PR G ++C
Sbjct: 259 HSMALTLDGE---------VFAWGYNNCGQIGSGSTANQPYPRKVTGCLQGKN-ASGITC 308
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G +AL + G + WGYN GQLG G L RV A + I Q+
Sbjct: 309 GQTSSMALVDNGEVYGWGYNGNGQLGIGNNGNQLTPCRV---------AALQGMCIQQIV 359
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVH 294
G H A+++ G +Y WG + GQLG + L P ++A ++ AC H
Sbjct: 360 SGYGHCLALTDKGLLYAWGANTYGQLG---TGTKSNHLSPVHIMADKERVVEVAACHSTH 416
Query: 295 -SCALTSKGALYAWG 308
S A T G ++ WG
Sbjct: 417 TSAAKTQSGQVFMWG 431
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 88/189 (46%), Gaps = 15/189 (7%)
Query: 228 EKITQVSCGE-YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFI 285
+K+ +S G H +++G+++ WG QLG+ S G L P + A L +
Sbjct: 194 KKVASLSYGSGPHVLLATDDGQLFAWGHNGYSQLGNGSTNPG---LSPVLITANLQNKKV 250
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
K+V+CG HS ALT G ++AWG + GQ+G G + Y R + +
Sbjct: 251 KEVSCGSHHSMALTLDGEVFAWGYNNCGQIGSGS---------TANQPYPRKVTGCLQGK 301
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAG 404
+ CG + ++ + +G ++GWGYN GQ + P V G ++++ +G
Sbjct: 302 NASGITCGQTSSMALVDNGEVYGWGYNGNGQLGIGNNGNQLTPCRVAALQGMCIQQIVSG 361
Query: 405 GGHSAVLAD 413
GH L D
Sbjct: 362 YGHCLALTD 370
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 69/158 (43%), Gaps = 21/158 (13%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG-GVHSCALTSK 301
++ EV+ +GL LG G ++P+++ L G + ++ G G H T
Sbjct: 157 ITHGNEVFVFGLNCSSCLG---TGDGLSTVMPKKLDFLRGKKVASLSYGSGPHVLLATDD 213
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN----GVQLVACGHSHT 357
G L+AWG + QLG G S P+L+ N V+ V+CG H+
Sbjct: 214 GQLFAWGHNGYSQLGNGSTNPGLS-------------PVLITANLQNKKVKEVSCGSHHS 260
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 395
+ DG + WGYN+ GQ + + YP V C+
Sbjct: 261 MALTLDGEVFAWGYNNCGQIGSGSTANQPYPRKVTGCL 298
>gi|332243760|ref|XP_003271040.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Nomascus
leucogenys]
Length = 814
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 168/360 (46%), Gaps = 36/360 (10%)
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
N + ++CG EH+A V + L+ +G+N +GQLG G++ P VK L+ E VK +
Sbjct: 34 NDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAA 93
Query: 121 CGAHCTAAIAE--PRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVH 178
CG + T E G + +L + + + F + + FT I Q+S GS
Sbjct: 94 CGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISF--FTSEHKIKQLSAGSNT 151
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
AL+E G L WG N GQ+G +V G + ++ +SCG Y
Sbjct: 152 SAALTEDGRLFMWGDNSEGQIGLKNVTNVCVPQQVTIG-----------KPVSWISCGYY 200
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
HSA V+ +GE+Y +G G+LG + G+ P+ V + I+ VACGG H+ L
Sbjct: 201 HSAFVTTDGELYVFGEPENGKLGLPNQLLGNHR-TPQLVSEIPEKVIQ-VACGGEHTVVL 258
Query: 299 TSKGALYAWGGSQAGQLGLGP---QTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS 355
T + A+Y +G Q GQLGLG +T +I N D + ++CG S
Sbjct: 259 T-ENAVYTFGLGQFGQLGLGTFLFETSDPKVIENIRD------------QTISYISCGES 305
Query: 356 HTLVYMRDGRIHGWGYNSYGQ--AANEKSTYAWYPSPV-DWCVGEVRKLAAGGGHSAVLA 412
HT + G ++ +G +G+ E T + P+ ++ V+ +A GG H V A
Sbjct: 306 HTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFSRFIVKLVACGGCHMVVFA 365
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 121/284 (42%), Gaps = 51/284 (17%)
Query: 144 LWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
++ +G+++ + P FW N + +SCG H ++ L +G N +GQLG G
Sbjct: 14 VFTFGKSKFAEDNPGKFWFK---NDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLG 70
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
+ + P +K A + EK+ +CG H+ +E G VY G + GQLG
Sbjct: 71 -SKSAVSKPTCVK--------ALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGL 121
Query: 263 CSLQSGDKELLPRRVVALDGIF-----IKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GD E R + F IK ++ G S ALT G L+ WG + GQ+GL
Sbjct: 122 -----GDTE--ERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGL 174
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQL------VACGHSHTLVYMRDGRIHGWGY 371
+N+ + VP V + ++CG+ H+ DG ++ +G
Sbjct: 175 ------------------KNVTNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVFGE 216
Query: 372 NSYGQAANEKSTYAWYPSP--VDWCVGEVRKLAAGGGHSAVLAD 413
G+ + +P V +V ++A GG H+ VL +
Sbjct: 217 PENGKLGLPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTE 260
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 103/235 (43%), Gaps = 53/235 (22%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+++WG N GQ G K + +P+Q+ G P W I+CG+ H+A V +DG
Sbjct: 161 LFMWGDNSEGQIGLKNV-TNVCVPQQV---TIGKPVS----W--ISCGYYHSAFVTTDGE 210
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF---VKSISCGAHCTAAIAEPRENDGTI 139
L+ +G E G+LG + H + QL SE V ++CG T + E
Sbjct: 211 LYVFGEPENGKLGLPNQLLGNH--RTPQLVSEIPEKVIQVACGGEHTVVLTE-------- 260
Query: 140 STSRLWVWGQNQGSNFPRLFWGAF-----TPNTI-------ICQVSCGSVHVVALSECGL 187
+ ++ +G Q F +L G F P I I +SCG H +++ GL
Sbjct: 261 --NAVYTFGLGQ---FGQLGLGTFLFETSDPKVIENIRDQTISYISCGESHTALITDIGL 315
Query: 188 LQAWGYNEYGQLGRGITCEGLQG---PRVIKGYAKFLDEAPELEKITQVSCGEYH 239
+ +G +G+LG G+ E P + +++F+ + V+CG H
Sbjct: 316 MYTFGDGRHGKLGLGL--ENFTNHFIPTLCSNFSRFI--------VKLVACGGCH 360
>gi|426236323|ref|XP_004012119.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Ovis aries]
Length = 527
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 126/263 (47%), Gaps = 25/263 (9%)
Query: 148 GQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEG 207
G Q + PR + T I C H+V + G + WG+N Y QLG G T G
Sbjct: 57 GDVQSTIEPRRL-DSLTGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNAG 115
Query: 208 LQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQS 267
L + + +++ +V+CG YHS ++ +GEV+ WG + GQ+G S +
Sbjct: 116 LVPYHISTNLSN--------KQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTAN 167
Query: 268 GDKELLPRRVVA-LDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSL 326
+ +PRRV L + ++ACG + S A+ + G ++ WG + GQLGLG +
Sbjct: 168 ---QPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSGNQPTP 224
Query: 327 IPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAW 386
+ R VQ VACG++HTLV +G+++ WG NSYGQ +
Sbjct: 225 CRVAALQGIR----------VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQS 274
Query: 387 YPSPVDWCVGEVRKLAAGGGHSA 409
YP+PV V + R + HSA
Sbjct: 275 YPTPV--VVEKDRIIEIAACHSA 295
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 134/300 (44%), Gaps = 43/300 (14%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTAAIAEPRENDGTIS 140
+F G N G LG G + P ++ L + + +S G+ H A E
Sbjct: 43 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLTGKKIACLSYGSGPHIVLATTE--------- 93
Query: 141 TSRLWVWGQNQGSNFPRLFWGA-FTP--------NTIICQVSCGSVHVVALSECGLLQAW 191
++ WG N S A P N + +V+CGS H + L+ G + AW
Sbjct: 94 -GEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAW 152
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
GYN GQ+G G T PR + G + + + ++CG+ S AV GEV+
Sbjct: 153 GYNNSGQVGSGSTANQ-PIPRRVTG-------CLQNKVVVNIACGQMCSMAVVNTGEVFV 204
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG GQLG L S + P RV AL GI ++ VACG H+ LT +G +YAWG +
Sbjct: 205 WGYNGNGQLG---LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 261
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRIHGWG 370
GQLG G N+S+ + ++ +++ AC +HT + G ++ WG
Sbjct: 262 YGQLGTG----------NKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 116/243 (47%), Gaps = 39/243 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G +P + L +N + +++ACG H+ + SDG
Sbjct: 96 VFTWGHNAYSQLG-NGTTNAGLVPYHISTNL------SNKQVIEVACGSYHSLVLTSDGE 148
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P +V LQ++ V +I+CG C+ A+ ++T
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAV---------VNT 199
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N N P A + +V+CG H + L++ G + AWG
Sbjct: 200 GEVFVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 259
Query: 194 NEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G + + P V+ E ++I ++ +C H SAA ++ G VY
Sbjct: 260 NSYGQLGTGNKSNQSYPTPVVV-----------EKDRIIEIAACHSAHTSAAKTQGGHVY 308
Query: 251 TWG 253
WG
Sbjct: 309 MWG 311
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 119/267 (44%), Gaps = 39/267 (14%)
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAHCTAAIAE 131
H ++G +FTWG N + QLG+GT P + L ++ V ++CG++ + +
Sbjct: 86 HIVLATTEGEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLT- 144
Query: 132 PRENDGTISTSRLWVWGQNQGSN----------FPRLFWGAFTPNTIICQVSCGSVHVVA 181
+DG + + WG N PR G N ++ ++CG + +A
Sbjct: 145 ---SDGEV-----FAWGYNNSGQVGSGSTANQPIPRRVTGCL-QNKVVVNIACGQMCSMA 195
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
+ G + WGYN GQLG G + RV A + ++ +V+CG H+
Sbjct: 196 VVNTGEVFVWGYNGNGQLGLGSSGNQPTPCRV---------AALQGIRVQRVACGYAHTL 246
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVH-SCAL 298
+++ G+VY WG S GQLG +G+K + P VV I+ AC H S A
Sbjct: 247 VLTDEGQVYAWGANSYGQLG-----TGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAK 301
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFS 325
T G +Y WG + + L P FS
Sbjct: 302 TQGGHVYMWGQCRGQSVTL-PHLTHFS 327
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 68/151 (45%), Gaps = 20/151 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++VWGYN +GQ G Q P A R +ACG+ HT + +G
Sbjct: 202 VFVWGYNGNGQLGLGSSGNQ--------PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 253
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
++ WGAN +GQLG G + + +P V + ++ +C AH +AA +
Sbjct: 254 VYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQG--------- 304
Query: 142 SRLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 305 GHVYMWGQCRGQSVTLPHLTHFSSTDDVFAC 335
>gi|224043366|ref|XP_002198142.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Taeniopygia
guttata]
Length = 537
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 149/369 (40%), Gaps = 87/369 (23%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G +A I ++V+G N S G G + +PK+L G L
Sbjct: 32 VFGTSANEAIYITHSDEVFVFGLNCSNCLG-TGDNQSTIVPKKLEA-----LCGKKISSL 85
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
G H DG ++ WG N + QLG+GT P +V C
Sbjct: 86 SYGSG-PHVVLCTEDGEVYAWGHNGYSQLGNGTTNQGITPVQV----------------C 128
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
T + + + +V+CGS H +ALS
Sbjct: 129 TNLLIKK------------------------------------VVEVACGSHHSMALSMD 152
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G L AWGYN GQ+G G T RV + + + ++CG+ S AV
Sbjct: 153 GDLYAWGYNNCGQVGSGSTANQPTPRRV--------SNCLQGKIVVGIACGQTSSMAVVN 204
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
NGEVY WG GQLG L + +L P RV AL + + +ACG H+ ALT +G LY
Sbjct: 205 NGEVYGWGYNGNGQLG---LGNNGNQLTPCRVAALHSVCVLQIACGYAHTLALTDEGLLY 261
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG---VQLVACGHSHT-LVYM 361
AWG + GQLG G ++ S P+ ++ V++ AC +HT
Sbjct: 262 AWGANTYGQLGTGNKSNQLS-------------PVQIMMEKERVVEIAACHSAHTSAAKT 308
Query: 362 RDGRIHGWG 370
+ G+++ WG
Sbjct: 309 QSGQVYMWG 317
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 116/233 (49%), Gaps = 24/233 (10%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HVV +E G + AWG+N Y QLG G T +G+ +V ++K+ +V+CG
Sbjct: 92 HVVLCTEDGEVYAWGHNGYSQLGNGTTNQGITPVQVCTNLL--------IKKVVEVACGS 143
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHSC 296
+HS A+S +G++Y WG + GQ+G S + PRRV L G + +ACG S
Sbjct: 144 HHSMALSMDGDLYAWGYNNCGQVGS---GSTANQPTPRRVSNCLQGKIVVGIACGQTSSM 200
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ + G +Y WG + GQLGLG L P ++ +L +ACG++H
Sbjct: 201 AVVNNGEVYGWGYNGNGQLGLGNNGNQ--LTPCRVAA-LHSVCVL-------QIACGYAH 250
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
TL +G ++ WG N+YGQ + SPV + + R + HSA
Sbjct: 251 TLALTDEGLLYAWGANTYGQLGTGNKSNQL--SPVQIMMEKERVVEIAACHSA 301
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 20/151 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WGYN +GQ G QL P ++ C L IACG+ HT A+ +G
Sbjct: 208 VYGWGYNGNGQLGLGNNGNQLT-PCRVAALHSVCV-------LQIACGYAHTLALTDEGL 259
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
L+ WGAN +GQLG G + + P ++ + V+ +C AH +AA + +
Sbjct: 260 LYAWGANTYGQLGTGNKSNQLSPVQIMMEKERVVEIAACHSAHTSAAKTQ---------S 310
Query: 142 SRLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
++++WGQ +G + FP L A T + C
Sbjct: 311 GQVYMWGQCRGQSVTFPHLTHFACTDDVFAC 341
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 75/156 (48%), Gaps = 17/156 (10%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHSCALT 299
++ + EV+ +GL LG +GD + ++P+++ AL G I ++ G G H T
Sbjct: 43 ITHSDEVFVFGLNCSNCLG-----TGDNQSTIVPKKLEALCGKKISSLSYGSGPHVVLCT 97
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
G +YAWG + QLG G N+ T + L++ V+ VACG H++
Sbjct: 98 EDGEVYAWGHNGYSQLGNGT--------TNQGITPVQVCTNLLIKKVVE-VACGSHHSMA 148
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 395
DG ++ WGYN+ GQ + + P V C+
Sbjct: 149 LSMDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCL 184
>gi|21537357|gb|AAM61698.1| UVB-resistance protein-like [Arabidopsis thaliana]
Length = 396
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 150/369 (40%), Gaps = 71/369 (19%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N G G + P + + AN + + A G H AV G
Sbjct: 59 LFTWGWNQRGTLGHPPETKTESTPSLVK-------SLANVKIVQAAIGAWHCLAVDDQGR 111
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ WG NE+GQ G EE K E + ++ + V C T + T
Sbjct: 112 AYAWGGNEYGQCG---EEPSKD-ETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTR 167
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSC---------------GSVHVVALSECGL 187
+VW WG P I Q+S G+ H +AL E G
Sbjct: 168 EGYVW-----------TWGQPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALKEDGT 216
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
L AWG NEYGQLG G T PR + LD+ + ++ G +HS A++ G
Sbjct: 217 LWAWGNNEYGQLGTGDTQ-----PRSYPIPVQGLDDL----TLVDIAAGGWHSTALTNEG 267
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
EVY WG G G+LG K +LP++V L G I V+CGG HS ALT G ++++
Sbjct: 268 EVYGWGRGEHGRLGFGDNDKSSK-MLPQKVNLLPGEDIIQVSCGGTHSVALTRDGRIFSF 326
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL---------------VAC 352
G G+LG G + + + +PI + P + VAC
Sbjct: 327 GRGDHGRLGYGRKVTTGQPL---------ELPIHIPPPEGRFNHTDEEDDGKWIAKHVAC 377
Query: 353 GHSHTLVYM 361
G HTL +
Sbjct: 378 GGRHTLAIV 386
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 150/351 (42%), Gaps = 69/351 (19%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+AS ++ WG+ E GQLG GT+E ++ V L+ V+S+ G+ + AI +D
Sbjct: 1 MASATSVIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAIC----DD 56
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTP-------NTIICQVSCGSVHVVALSECGLLQ 189
G + T W W Q P TP N I Q + G+ H +A+ + G
Sbjct: 57 GKLFT---WGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGAWHCLAVDDQGRAY 113
Query: 190 AWGYNEYGQLG----------------------------RGITCEGLQGPRVIK-GYAKF 220
AWG NEYGQ G R + G + + GY
Sbjct: 114 AWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWT 173
Query: 221 LDEAPELEKITQVS---------------CGEYHSAAVSENGEVYTWGLGSVGQLGHCSL 265
+ I Q+S G +H+ A+ E+G ++ WG GQLG
Sbjct: 174 WGQPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDT 233
Query: 266 QSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
Q P V LD + + D+A GG HS ALT++G +Y WG + G+LG G +S
Sbjct: 234 QP---RSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSK 290
Query: 326 LIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
++P + + L+ + V+CG +H++ RDGRI +G +G+
Sbjct: 291 MLPQKVN--------LLPGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGR 333
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 102/251 (40%), Gaps = 31/251 (12%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ V GS + +A+ + G L WG+N+ G LG + P ++K A
Sbjct: 40 VRSVVGGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANV-------- 91
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA----LDGIF 284
KI Q + G +H AV + G Y WG GQ G + + R +V +
Sbjct: 92 KIVQAAIGAWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLT 151
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP 344
++ VA GG HS LT +G ++ WG D ++P+ V
Sbjct: 152 VRQVAAGGTHSVVLTREGYVWTWGQPWP-----------------PGDIKQISVPVRVQG 194
Query: 345 -NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLA 402
V+L+A G H L DG + WG N YGQ + YP PV + +A
Sbjct: 195 LENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIA 254
Query: 403 AGGGHSAVLAD 413
AGG HS L +
Sbjct: 255 AGGWHSTALTN 265
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 112/237 (47%), Gaps = 34/237 (14%)
Query: 24 YVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTL 83
YVW + GQ G +Q+ +P ++ G + L IA G H A+ DGTL
Sbjct: 170 YVWTW---GQPWPPGDIKQISVPVRV--------QGLENVRL-IAVGAFHNLALKEDGTL 217
Query: 84 FTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI---- 139
+ WG NE+GQLG G + R +P V+ L + I+ G + A+ N+G +
Sbjct: 218 WAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALT----NEGEVYGWG 273
Query: 140 --STSRLWVWGQNQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNE 195
RL +G N S+ P+ P I QVSCG H VAL+ G + ++G +
Sbjct: 274 RGEHGRL-GFGDNDKSSKMLPQKV--NLLPGEDIIQVSCGGTHSVALTRDGRIFSFGRGD 330
Query: 196 YGQLGRG---ITCEGLQGPRVI---KGYAKFLDEAPELEKITQ-VSCGEYHSAAVSE 245
+G+LG G T + L+ P I +G DE + + I + V+CG H+ A+ E
Sbjct: 331 HGRLGYGRKVTTGQPLELPIHIPPPEGRFNHTDEEDDGKWIAKHVACGGRHTLAIVE 387
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 80/172 (46%), Gaps = 20/172 (11%)
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
V WG G GQLG L + +++ L V AL+ ++ V G +S A+ G L+ WG
Sbjct: 7 VIAWGSGEDGQLG---LGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWG 63
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHG 368
+Q G LG P+T++ S P+ + N+ I+ A G H L GR +
Sbjct: 64 WNQRGTLGHPPETKTES-TPSLVKS-LANVKIV-------QAAIGAWHCLAVDDQGRAYA 114
Query: 369 WGYNSYGQAANEKST-YAWYPSPVDWCVGE-------VRKLAAGGGHSAVLA 412
WG N YGQ E S P D + + VR++AAGG HS VL
Sbjct: 115 WGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLT 166
>gi|109484871|ref|XP_001075834.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
norvegicus]
Length = 4859
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 195/430 (45%), Gaps = 70/430 (16%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
MD + T+RP D ++ K +Y+WG GQ GR + +P P
Sbjct: 3974 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMVPATAP--------- 4022
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
+ S+ + CG T + ++GT+ G +G+LG G + + LQ V +
Sbjct: 4023 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQL 4082
Query: 120 --SCGAH-CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI---- 168
SCG+ + A+ E E ++ WG ++ +L G P I
Sbjct: 4083 VTSCGSDGHSMALTESGE---------VFSWGDG---DYGKLGHGNSDRQRRPRQIEALQ 4130
Query: 169 ---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV--IKGYAKFLDE 223
+ Q+SCG H ++ G L +G +YG+LG G T RV ++GY
Sbjct: 4131 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY------ 4184
Query: 224 APELEKITQVSCGEYHSAAVSENGE-VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG 282
+I QV+CG H+ AVS +G V+ +G G G+LG L + + P++V L G
Sbjct: 4185 -----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCG 4236
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL- 341
I IK VACG S ALT G +Y +G Q +GL P+ R+ + + IP+L
Sbjct: 4237 IGIKKVACGTQFSVALTKDGHVYTFG--QDRLIGL-PEGRA------RNHNRPQQIPVLA 4287
Query: 342 -VVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VR 399
VV ++ VA G HTL G ++ WG NS GQ + + P+ V G+ +R
Sbjct: 4288 GVV---IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIR 4344
Query: 400 KLAAGGGHSA 409
+++AG HSA
Sbjct: 4345 QISAGRCHSA 4354
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 186/405 (45%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ P+L P+ ++++ I G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQ------PKL--APSFSDAQ--TIEAGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG----T 138
+ G +G+LG G + +K+L E +SI ++ + +DG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQS---TLKKLTFEPHRSIK-------KVSSSKGSDGHTLAF 473
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ ++ WG + +P+L G ++C VS G H A++E G L
Sbjct: 474 TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGEL 532
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G + P ++K ++ + +VSCG H+ A+S++G
Sbjct: 533 YTWGEGDFGRLGHGDS-NSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 581
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ + AL G+FI+ V G S ALTS G +Y
Sbjct: 582 TVWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVY 636
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V ++ G SH L D
Sbjct: 637 AWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-ISIGDSHCLSLSHDNE 685
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 143/307 (46%), Gaps = 43/307 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V SDG
Sbjct: 4101 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTSDGK 4152
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG++
Sbjct: 4153 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA----DGSM--- 4205
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNT------IIC-----QVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T + ++C +V+CG+ VAL++ G + +
Sbjct: 4206 -VWAFGDG---DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4261
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ I A + I V+ G H+ A++ G+VY
Sbjct: 4262 GQDRLIGLPEG-RARNHNRPQQIPVLAGVV--------IEDVAVGAEHTLALASTGDVYA 4312
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWGGS 310
WG S GQLG L + P V L G I+ ++ G HS A T+ A G S
Sbjct: 4313 WGSNSEGQLG---LGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPVPPRAPGVS 4369
Query: 311 QAGQLGL 317
QLGL
Sbjct: 4370 VPLQLGL 4376
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P I I +V GS +AL+ G + AW
Sbjct: 583 -VWSFG---GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I +S G+ H ++S + EVY
Sbjct: 639 GCG--ACLGCGSSEATALRPKLIEELAA--------TRIVDISIGDSHCLSLSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDGI I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 98/231 (42%), Gaps = 36/231 (15%)
Query: 191 WGYNEYGQL---GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
WG +GQL GR + AP + QV CG+ + + NG
Sbjct: 4000 WGAGRHGQLAEAGRNVMVPA---------------TAPSFSQAQQVICGQNCTFVIQANG 4044
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGAL 304
V G GS G+LG + S D +L + AL G + + +CG HS ALT G +
Sbjct: 4045 TVLACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEV 4101
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 364
++WG G+LG G R R I L VQ+ +CG H+ V DG
Sbjct: 4102 FSWGDGDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDG 4151
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
++ +G YG+ ++ P V G ++ ++A G H+ AV AD
Sbjct: 4152 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 4202
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VSE EVY WG S QL G +E + + +A + + G + +++ G
Sbjct: 368 VSETCEVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ A G G+LGLG +L + + R+I + G HTL +
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RSIKKVSSSKG------SDGHTLAFTT 475
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+G + WG YG+ + S+ YP + + G+V ++AG HSA + +
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
>gi|391344583|ref|XP_003746575.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Metaseiulus occidentalis]
Length = 1152
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 134/296 (45%), Gaps = 41/296 (13%)
Query: 26 WGYNHSGQTGRKGRERQL-RIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
+G +SG+ G G E + R+P+ +P +L G R IA G HT + S G +
Sbjct: 21 FGNTNSGELGLGGIEDHIVRVPRSIP-QLEGI------RVRQIATGAHHTLVLTSHGRVL 73
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRL 144
+ G+N+ QLG E PE V LQ + + CG + A+ E ++
Sbjct: 74 SCGSNDHDQLGQ--EVSTTKPEPVTALQCLRIVQVCCGQQHSMALTE---------AGQV 122
Query: 145 WVWGQN----------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
++WG N Q S F P T++ Q++CGS H +AL G L AWG N
Sbjct: 123 YMWGSNSKGQLGNGEGQESRLSPRFVKTLAPFTVV-QIACGSNHCLALLNNGALYAWGDN 181
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
GQLG G E + P + ++Q++CG HS +S++G ++ WG
Sbjct: 182 GNGQLGIGTVGEPQRVPVEVTNLLGL--------PLSQIACGANHSMVLSKSGVIFVWGS 233
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
GQLG L P + L +K +A GG HS ALT+ G ++ +G S
Sbjct: 234 NRFGQLG---LSDNKDRAFPTLLKTLRQQHVKFIAAGGAHSAALTAHGGVFTFGWS 286
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 126/249 (50%), Gaps = 31/249 (12%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ Q++ G+ H + L+ G + + G N++ QLG+ ++ P + A +
Sbjct: 53 VRQIATGAHHTLVLTSHGRVLSCGSNDHDQLGQEVSTTK---PEPVT--------ALQCL 101
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
+I QV CG+ HS A++E G+VY WG S GQLG+ Q + L PR V L + +
Sbjct: 102 RIVQVCCGQQHSMALTEAGQVYMWGSNSKGQLGNGEGQ--ESRLSPRFVKTLAPFTVVQI 159
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLG----PQTRSFSLIPNESDTYFRNIPILVVP 344
ACG H AL + GALYAWG + GQLG+G PQ +P E T +P+
Sbjct: 160 ACGSNHCLALLNNGALYAWGDNGNGQLGIGTVGEPQR-----VPVEV-TNLLGLPL---- 209
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAA 403
+ACG +H++V + G I WG N +GQ + +P+ + + V+ +AA
Sbjct: 210 ---SQIACGANHSMVLSKSGVIFVWGSNRFGQLGLSDNKDRAFPTLLKTLRQQHVKFIAA 266
Query: 404 GGGHSAVLA 412
GG HSA L
Sbjct: 267 GGAHSAALT 275
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 130/298 (43%), Gaps = 39/298 (13%)
Query: 86 WGANEFGQLGDGTEEGR--KHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSR 143
+G G+LG G E + P + QL+ V+ I+ GAH T + S R
Sbjct: 21 FGNTNSGELGLGGIEDHIVRVPRSIPQLEGIRVRQIATGAHHTLVLT---------SHGR 71
Query: 144 LWVWGQNQGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYNEY 196
+ G N + P + I QV CG H +AL+E G + WG N
Sbjct: 72 VLSCGSNDHDQLGQEV-STTKPEPVTALQCLRIVQVCCGQQHSMALTEAGQVYMWGSNSK 130
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG G E PR +K A F + Q++CG H A+ NG +Y WG
Sbjct: 131 GQLGNGEGQESRLSPRFVKTLAPF--------TVVQIACGSNHCLALLNNGALYAWGDNG 182
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
GQLG ++ G+ + +P V L G+ + +ACG HS L+ G ++ WG ++ GQLG
Sbjct: 183 NGQLGIGTV--GEPQRVPVEVTNLLGLPLSQIACGANHSMVLSKSGVIFVWGSNRFGQLG 240
Query: 317 LGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
L + D F + + V+ +A G +H+ G + +G++ Y
Sbjct: 241 LS----------DNKDRAFPTLLKTLRQQHVKFIAAGGAHSAALTAHGGVFTFGWSFY 288
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 103/246 (41%), Gaps = 40/246 (16%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG N +GQ G R+P ++ L G P IACG H+ ++ G
Sbjct: 174 ALYAWGDNGNGQLGIGTVGEPQRVPVEVT-NLLGLPLS------QIACGANHSMVLSKSG 226
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIS 140
+F WG+N FGQLG + R P +K L+ + VK I+ GAH A A G +
Sbjct: 227 VIFVWGSNRFGQLGLSDNKDRAFPTLLKTLRQQHVKFIAAGGAHSAALTAH-----GGVF 281
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQ----AWGYNEY 196
T + W F+ + + +A L++ Y Y
Sbjct: 282 T---FGWS----------FYESHEVRISLRGTESNPQSALARKLFSLIEREFCRHSYGSY 328
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN-GEVYTWGLG 255
GQLG G + L ++ + ITQ++ G H+ + G+V+T+GLG
Sbjct: 329 GQLGHGSKNDQLTPMKIQELMGT---------TITQIALGRCHTVCYAPTVGKVFTFGLG 379
Query: 256 SVGQLG 261
GQLG
Sbjct: 380 GNGQLG 385
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 131/310 (42%), Gaps = 62/310 (20%)
Query: 23 IYVWGYNHSGQTGR-KGRERQL--RIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+Y+WG N GQ G +G+E +L R K L P + IACG H A+ +
Sbjct: 122 VYMWGSNSKGQLGNGEGQESRLSPRFVKTLAP----------FTVVQIACGSNHCLALLN 171
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
+G L+ WG N GQLG GT E ++ P +V L + I+CGA+ + +++
Sbjct: 172 NGALYAWGDNGNGQLGIGTVGEPQRVPVEVTNLLGLPLSQIACGANHSMVLSK------- 224
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ ++VWG N+ FP L + ++ G H AL+ G +
Sbjct: 225 --SGVIFVWGSNRFGQLGLSDNKDRAFPTLLKTLRQQHVKF--IAAGGAHSAALTAHGGV 280
Query: 189 QAWGYNEYGQLGRGITCEGLQ-GPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+G++ Y I+ G + P+ A+ L E E C +
Sbjct: 281 FTFGWSFYESHEVRISLRGTESNPQ--SALARKLFSLIERE-----FCRHSY-------- 325
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS-CALTSKGALYA 306
GS GQLGH S + +L P ++ L G I +A G H+ C + G ++
Sbjct: 326 -------GSYGQLGHG---SKNDQLTPMKIQELMGTTITQIALGRCHTVCYAPTVGKVFT 375
Query: 307 WGGSQAGQLG 316
+G GQLG
Sbjct: 376 FGLGGNGQLG 385
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 13/110 (11%)
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDG 364
+G + +G+LGLG +P R+IP L G+++ +A G HTLV G
Sbjct: 21 FGNTNSGELGLGGIEDHIVRVP-------RSIPQL---EGIRVRQIATGAHHTLVLTSHG 70
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADA 414
R+ G N + Q E ST P C+ + ++ G HS L +A
Sbjct: 71 RVLSCGSNDHDQLGQEVSTTKPEPVTALQCL-RIVQVCCGQQHSMALTEA 119
>gi|350596671|ref|XP_003361480.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
[Sus scrofa]
Length = 2561
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 128/430 (29%), Positives = 195/430 (45%), Gaps = 70/430 (16%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
MD + T+RP D ++ K +Y+WG GQ GR + +P P
Sbjct: 1587 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMVPAAAP--------- 1635
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
+ S+ + CG T + ++GT+ G +G+LG G + + LQ V +
Sbjct: 1636 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQL 1695
Query: 120 --SCGAH-CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI---- 168
SCG+ + A+ E E ++ WG ++ +L G P I
Sbjct: 1696 VTSCGSDGHSMALTESGE---------VFSWGDG---DYGKLGHGNSDRQRRPRQIEALQ 1743
Query: 169 ---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV--IKGYAKFLDE 223
+ Q+SCG H ++ G L +G +YG+LG G T RV ++GY
Sbjct: 1744 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY------ 1797
Query: 224 APELEKITQVSCGEYHSAAVSENGE-VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG 282
+I QV+CG H+ AVS +G V+ +G G G+LG L + + P++V L G
Sbjct: 1798 -----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCG 1849
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL- 341
I IK VACG S ALT G +Y +G Q +GL P+ R+ + + IP+L
Sbjct: 1850 IGIKKVACGTQFSVALTKDGHVYTFG--QDRLIGL-PEGRA------RNHNRPQQIPVLA 1900
Query: 342 -VVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VR 399
VV ++ VA G HTL G ++ WG NS GQ + + P+ V G+ VR
Sbjct: 1901 GVV---IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVR 1957
Query: 400 KLAAGGGHSA 409
+++AG HSA
Sbjct: 1958 QISAGRCHSA 1967
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 143/307 (46%), Gaps = 43/307 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V SDG
Sbjct: 1714 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTSDGK 1765
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG++
Sbjct: 1766 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA----DGSM--- 1818
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNT------IIC-----QVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T + ++C +V+CG+ VAL++ G + +
Sbjct: 1819 -VWAFGDG---DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 1874
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ I A + I V+ G H+ A++ G+VY
Sbjct: 1875 GQDRLIGLPEG-RARNHNRPQQIPVLAGVV--------IEDVAVGAEHTLALASTGDVYA 1925
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWGGS 310
WG S GQLG L + P V L G ++ ++ G HS A T+ A G S
Sbjct: 1926 WGSNSEGQLG---LGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVS 1982
Query: 311 QAGQLGL 317
QLGL
Sbjct: 1983 VPLQLGL 1989
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 30/228 (13%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +GQL G V+ A AP + QV CG+ + + NG V
Sbjct: 1613 WGAGRHGQLAEA-------GRNVMVPAA-----APSFSQAQQVICGQNCTFVIQANGTVL 1660
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGALYAW 307
G GS G+LG + S D +L + AL G + + +CG HS ALT G +++W
Sbjct: 1661 ACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSW 1717
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G R R I L VQ+ +CG H+ V DG++
Sbjct: 1718 GDGDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLF 1767
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
+G YG+ ++ P V G ++ ++A G H+ AV AD
Sbjct: 1768 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 1815
>gi|148694174|gb|EDL26121.1| mCG130390 [Mus musculus]
Length = 4870
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 195/430 (45%), Gaps = 70/430 (16%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
MD + T+RP D ++ K +Y+WG GQ GR + +P P
Sbjct: 3985 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMVPATAP--------- 4033
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
+ S+ + CG T + ++GT+ G +G+LG G + + LQ V +
Sbjct: 4034 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQL 4093
Query: 120 --SCGAH-CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI---- 168
SCG+ + A+ E E ++ WG ++ +L G P I
Sbjct: 4094 VTSCGSDGHSMALTESGE---------VFSWGDG---DYGKLGHGNSDRQRRPRQIEALQ 4141
Query: 169 ---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV--IKGYAKFLDE 223
+ Q+SCG H ++ G L +G +YG+LG G T RV ++GY
Sbjct: 4142 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY------ 4195
Query: 224 APELEKITQVSCGEYHSAAVSENGE-VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG 282
+I QV+CG H+ AVS +G V+ +G G G+LG L + + P++V L G
Sbjct: 4196 -----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCG 4247
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL- 341
I IK VACG S ALT G +Y +G Q +GL P+ R+ + + IP+L
Sbjct: 4248 IGIKKVACGTQFSVALTKDGHVYTFG--QDRLIGL-PEGRA------RNHNRPQQIPVLA 4298
Query: 342 -VVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VR 399
VV ++ VA G HTL G ++ WG NS GQ + + P+ V G+ +R
Sbjct: 4299 GVV---IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIR 4355
Query: 400 KLAAGGGHSA 409
+++AG HSA
Sbjct: 4356 QISAGRCHSA 4365
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 181/405 (44%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ P+L P+ ++++ I G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQ------PKL--APSFSDAQ--TIEAGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA----HCTAAIAEPRENDGT 138
+ G +G+LG G + +K+ +K +S H A E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE------- 476
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG + +P+L G ++C VS G H A++E G L
Sbjct: 477 ---GEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGEL 532
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G + P ++K ++ + +VSCG H+ A+S++G
Sbjct: 533 YTWGEGDFGRLGHGDS-NSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 581
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ + AL G+FI+ V G S ALTS G +Y
Sbjct: 582 TVWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVY 636
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V ++ G SH L D
Sbjct: 637 AWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-ISIGDSHCLSLSHDNE 685
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 143/307 (46%), Gaps = 43/307 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V SDG
Sbjct: 4112 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTSDGK 4163
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG++
Sbjct: 4164 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA----DGSM--- 4216
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNT------IIC-----QVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T + ++C +V+CG+ VAL++ G + +
Sbjct: 4217 -VWAFGDG---DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4272
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ I A + I V+ G H+ A++ G+VY
Sbjct: 4273 GQDRLIGLPEG-RARNHNRPQQIPVLAGVV--------IEDVAVGAEHTLALASTGDVYA 4323
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWGGS 310
WG S GQLG L + P V L G I+ ++ G HS A T+ A G S
Sbjct: 4324 WGSNSEGQLG---LGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPVPPRAPGVS 4380
Query: 311 QAGQLGL 317
QLGL
Sbjct: 4381 VPLQLGL 4387
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P I I +V GS +AL+ G + AW
Sbjct: 583 -VWSFG---GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I +S G+ H ++S + EVY
Sbjct: 639 GCG--ACLGCGSSEATALRPKLIEELAA--------TRIVDISIGDSHCLSLSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDGI I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 98/231 (42%), Gaps = 36/231 (15%)
Query: 191 WGYNEYGQL---GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
WG +GQL GR + AP + QV CG+ + + NG
Sbjct: 4011 WGAGRHGQLAEAGRNVMVPA---------------TAPSFSQAQQVICGQNCTFVIQANG 4055
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGAL 304
V G GS G+LG + S D +L + AL G + + +CG HS ALT G +
Sbjct: 4056 TVLACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEV 4112
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 364
++WG G+LG G R R I L VQ+ +CG H+ V DG
Sbjct: 4113 FSWGDGDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDG 4162
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
++ +G YG+ ++ P V G ++ ++A G H+ AV AD
Sbjct: 4163 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 4213
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VSE EVY WG S QL G +E + + +A + + G + +++ G
Sbjct: 368 VSETCEVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ A G G+LGLG +L + + R+I + G HTL +
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RSIKKVSSSKG------SDGHTLAFTT 475
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+G + WG YG+ + S+ YP + + G+V ++AG HSA + +
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
>gi|257196144|ref|NP_663592.3| hect domain and RCC1-like domain 1 [Mus musculus]
Length = 4859
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 195/430 (45%), Gaps = 70/430 (16%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
MD + T+RP D ++ K +Y+WG GQ GR + +P P
Sbjct: 3974 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMVPATAP--------- 4022
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
+ S+ + CG T + ++GT+ G +G+LG G + + LQ V +
Sbjct: 4023 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQL 4082
Query: 120 --SCGAH-CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI---- 168
SCG+ + A+ E E ++ WG ++ +L G P I
Sbjct: 4083 VTSCGSDGHSMALTESGE---------VFSWGDG---DYGKLGHGNSDRQRRPRQIEALQ 4130
Query: 169 ---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV--IKGYAKFLDE 223
+ Q+SCG H ++ G L +G +YG+LG G T RV ++GY
Sbjct: 4131 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY------ 4184
Query: 224 APELEKITQVSCGEYHSAAVSENGE-VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG 282
+I QV+CG H+ AVS +G V+ +G G G+LG L + + P++V L G
Sbjct: 4185 -----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCG 4236
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL- 341
I IK VACG S ALT G +Y +G Q +GL P+ R+ + + IP+L
Sbjct: 4237 IGIKKVACGTQFSVALTKDGHVYTFG--QDRLIGL-PEGRA------RNHNRPQQIPVLA 4287
Query: 342 -VVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VR 399
VV ++ VA G HTL G ++ WG NS GQ + + P+ V G+ +R
Sbjct: 4288 GVV---IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIR 4344
Query: 400 KLAAGGGHSA 409
+++AG HSA
Sbjct: 4345 QISAGRCHSA 4354
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 181/405 (44%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ P+L P+ ++++ I G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQ------PKL--APSFSDAQ--TIEAGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA----HCTAAIAEPRENDGT 138
+ G +G+LG G + +K+ +K +S H A E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE------- 476
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG + +P+L G ++C VS G H A++E G L
Sbjct: 477 ---GEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGEL 532
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G + P ++K ++ + +VSCG H+ A+S++G
Sbjct: 533 YTWGEGDFGRLGHGDS-NSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 581
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ + AL G+FI+ V G S ALTS G +Y
Sbjct: 582 TVWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVY 636
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V ++ G SH L D
Sbjct: 637 AWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-ISIGDSHCLSLSHDNE 685
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 143/307 (46%), Gaps = 43/307 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V SDG
Sbjct: 4101 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTSDGK 4152
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG++
Sbjct: 4153 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA----DGSM--- 4205
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNT------IIC-----QVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T + ++C +V+CG+ VAL++ G + +
Sbjct: 4206 -VWAFGDG---DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4261
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ I A + I V+ G H+ A++ G+VY
Sbjct: 4262 GQDRLIGLPEG-RARNHNRPQQIPVLAGVV--------IEDVAVGAEHTLALASTGDVYA 4312
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWGGS 310
WG S GQLG L + P V L G I+ ++ G HS A T+ A G S
Sbjct: 4313 WGSNSEGQLG---LGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPVPPRAPGVS 4369
Query: 311 QAGQLGL 317
QLGL
Sbjct: 4370 VPLQLGL 4376
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P I I +V GS +AL+ G + AW
Sbjct: 583 -VWSFG---GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I +S G+ H ++S + EVY
Sbjct: 639 GCG--ACLGCGSSEATALRPKLIEELAA--------TRIVDISIGDSHCLSLSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDGI I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 98/231 (42%), Gaps = 36/231 (15%)
Query: 191 WGYNEYGQL---GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
WG +GQL GR + AP + QV CG+ + + NG
Sbjct: 4000 WGAGRHGQLAEAGRNVMVPA---------------TAPSFSQAQQVICGQNCTFVIQANG 4044
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGAL 304
V G GS G+LG + S D +L + AL G + + +CG HS ALT G +
Sbjct: 4045 TVLACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEV 4101
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 364
++WG G+LG G R R I L VQ+ +CG H+ V DG
Sbjct: 4102 FSWGDGDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDG 4151
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
++ +G YG+ ++ P V G ++ ++A G H+ AV AD
Sbjct: 4152 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 4202
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VSE EVY WG S QL G +E + + +A + + G + +++ G
Sbjct: 368 VSETCEVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ A G G+LGLG +L + + R+I + G HTL +
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RSIKKVSSSKG------SDGHTLAFTT 475
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+G + WG YG+ + S+ YP + + G+V ++AG HSA + +
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
>gi|403303318|ref|XP_003942281.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Saimiri
boliviensis boliviensis]
Length = 531
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 142/304 (46%), Gaps = 39/304 (12%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V D +F +G N LG G + P+K++ L + +KS+S G+ ++ D
Sbjct: 37 VTDDDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLST---ED 93
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTII---CQVSCGSVHVVALSECGL 187
G + + WG N G+ + N +I +V+CGS H +AL+ G
Sbjct: 94 GVV-----YAWGHNGYSQLGNGTTNQGVAPIQVCTNLLIKKVVEVACGSHHSMALAADGE 148
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWGYN GQ+G G T PR + F +++ ++CG+ S AV +NG
Sbjct: 149 VFAWGYNNCGQVGSGSTANQ-PTPRKVTNCLHF-------KRVVGIACGQTSSMAVLDNG 200
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
EVY WG GQLG L + +L P RV AL + + + CG H+ ALT +G LYAW
Sbjct: 201 EVYGWGYNGNGQLG---LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAW 257
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRI 366
G + GQLG G + + N + + V++ AC +HT + G +
Sbjct: 258 GANTYGQLGTGNKNN----LLNPAHIMVEKERV------VEIAACHSAHTSAAKTQGGHV 307
Query: 367 HGWG 370
+ WG
Sbjct: 308 YMWG 311
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 125/267 (46%), Gaps = 33/267 (12%)
Query: 148 GQNQGSNFPRLFWGAFTPNTIICQVSCGS-VHVVALSECGLLQAWGYNEYGQLGRGITCE 206
G NQ + P+ G I +S GS HV+ +E G++ AWG+N Y QLG G T +
Sbjct: 57 GDNQSTLVPKKLEGLCGKK--IKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQ 114
Query: 207 GLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQ 266
G+ +V ++K+ +V+CG +HS A++ +GEV+ WG + GQ+G S
Sbjct: 115 GVAPIQVCTNLL--------IKKVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTA 166
Query: 267 SGDKELLPRRVV-ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
+ + PR+V L + +ACG S A+ G +Y WG + GQLGLG +
Sbjct: 167 N---QPTPRKVTNCLHFKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLT 223
Query: 326 LIPNESDTYFRNIPILVVPNG---VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKS 382
P+ V V + CG++HTL +G ++ WG N+YGQ
Sbjct: 224 -------------PVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNK 270
Query: 383 TYAWYPSPVDWCVGEVRKLAAGGGHSA 409
P+ + V + R + HSA
Sbjct: 271 NNLLNPAHI--MVEKERVVEIAACHSA 295
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 113/452 (25%), Positives = 179/452 (39%), Gaps = 69/452 (15%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG+N Q G G Q P Q+ C + +++ACG H+ A+A+DG
Sbjct: 95 VVYAWGHNGYSQLGN-GTTNQGVAPIQV------CTNLLIKKVVEVACGSHHSMALAADG 147
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+F WG N GQ+G G+ + P KV L + V I+CG + A+ + E G
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHFKRVVGIACGQTSSMAVLDNGEVYG--- 204
Query: 141 TSRLWVWGQN------QGSNFPRLFWGAFTPNTIIC--QVSCGSVHVVALSECGLLQAWG 192
WG N G+N +L +C Q+ CG H +AL++ GLL AWG
Sbjct: 205 ------WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G L ++ E E++ ++ +C H SAA ++ G VY
Sbjct: 259 ANTYGQLGTGNKNNLLNPAHIM----------VEKERVVEIAACHSAHTSAAKTQGGHVY 308
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC-GGVHSCALTSKGALYAWGG 309
W G C G +LP + ++C V +C T +
Sbjct: 309 MW--------GQC---RGQSVILPH---------LTHLSCTDDVFACFATPAVSWRLLSV 348
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFR-NIPILVVPNGVQLVACGHSHTLVYMRDGRIHG 368
L + + P +D FR + + V V + C H ++
Sbjct: 349 EHEDFLTVAESLKKEFDSPENADLKFRIDGKYIHVHKAVLKIRCEHFRSMFQSY------ 402
Query: 369 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL----AAGGGHSAVLADACSLKELCEFR 424
W + ++ +Y+ Y + + + + L A G A LK+LC+
Sbjct: 403 WNEDMKEVIEIDQFSYSVYRAFLQYLYTDTVDLPPEDAIGLLDLATSYCENRLKKLCQHI 462
Query: 425 LAESVTLSNASEIEDVASRTGSEALARLCERL 456
+ +T+ NA + A R +E L C +
Sbjct: 463 IKRGITVENAFSLFSAAVRYDAEDLEEFCFKF 494
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 80/177 (45%), Gaps = 25/177 (14%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHSCALT 299
V+++ EV+ +GL LG +GD + L+P+++ L G IK ++ G G H T
Sbjct: 37 VTDDDEVFVFGLNYSNCLG-----TGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLST 91
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN----GVQLVACGHS 355
G +YAWG + QLG G + + PI V N V VACG
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGVA-------------PIQVCTNLLIKKVVEVACGSH 138
Query: 356 HTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
H++ DG + WGYN+ GQ + + P V C+ R + G ++ +A
Sbjct: 139 HSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHFKRVVGIACGQTSSMA 195
>gi|397515719|ref|XP_003828093.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Pan paniscus]
Length = 4798
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 195/430 (45%), Gaps = 70/430 (16%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
MD + T+RP D ++ K +Y+WG GQ GR + +P P
Sbjct: 3913 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMVPAAAP--------- 3961
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
+ S+ + CG T + ++GT+ G +G+LG G + + LQ V +
Sbjct: 3962 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQL 4021
Query: 120 --SCGAH-CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI---- 168
SCG+ + A+ E E ++ WG ++ +L G P I
Sbjct: 4022 VTSCGSDGHSMALTESGE---------VFSWGDG---DYGKLGHGNSDRQRRPRQIEALQ 4069
Query: 169 ---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV--IKGYAKFLDE 223
+ Q+SCG H ++ G L +G +YG+LG G T RV ++GY
Sbjct: 4070 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY------ 4123
Query: 224 APELEKITQVSCGEYHSAAVSENGE-VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG 282
+I QV+CG H+ AVS +G V+ +G G G+LG L + + P+++ L G
Sbjct: 4124 -----QIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLG---LGNSTAKSSPQKIDVLCG 4175
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
I IK VACG S ALT G +Y +G Q +GL P+ R+ + + IP+L
Sbjct: 4176 IGIKKVACGTQFSVALTKDGHVYTFG--QDRLIGL-PEGRA------RNHNRPQQIPVLA 4226
Query: 343 VPNGVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VR 399
GV + VA G HTL +G ++ WG NS GQ + + P+ V G+ VR
Sbjct: 4227 ---GVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVR 4283
Query: 400 KLAAGGGHSA 409
+++AG HSA
Sbjct: 4284 QISAGRCHSA 4293
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 176/405 (43%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ PK P + S I G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQ-PKLAP---------SFSDAQTIEAGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA----HCTAAIAEPRENDGT 138
+ G +G+LG G + +K+ +K +S H A E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE------- 476
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG + +P+L G ++C VS G H A++E G L
Sbjct: 477 ---GEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGEL 532
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G P ++K ++ + +VSCG H+ A+S++G
Sbjct: 533 YTWGEGDFGRLGHG-DSNSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 581
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ + AL G+FI+ V G S ALTS G +Y
Sbjct: 582 TVWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVY 636
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V V+ G SH L D
Sbjct: 637 AWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-VSIGDSHCLALSHDNE 685
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 141/307 (45%), Gaps = 43/307 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V SDG
Sbjct: 4040 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTSDGK 4091
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A+ ++ S
Sbjct: 4092 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV--------SVDGS 4143
Query: 143 RLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T P I I +V+CG+ VAL++ G + +
Sbjct: 4144 MVWAFGDG---DYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4200
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ I A + I V+ G H+ A++ NG+VY
Sbjct: 4201 GQDRLIGLPEG-RARNHNRPQQIPVLAGVI--------IEDVAVGAEHTLALASNGDVYA 4251
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWGGS 310
WG S GQLG L + P V L G ++ ++ G HS A T+ A G S
Sbjct: 4252 WGSNSEGQLG---LGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVS 4308
Query: 311 QAGQLGL 317
QLGL
Sbjct: 4309 VPLQLGL 4315
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P I I +V GS +AL+ G + AW
Sbjct: 583 -VWSFG---GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I VS G+ H A+S + EVY
Sbjct: 639 GCG--ACLGCGSSEATALRPKLIEELAA--------TRIVDVSIGDSHCLALSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDGI I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 97/226 (42%), Gaps = 29/226 (12%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +GQL G V+ A AP + QV CG+ + + NG V
Sbjct: 3939 WGAGRHGQLAEA-------GRNVMVPAA-----APSFSQAQQVICGQNCTFVIQANGTVL 3986
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGALYAW 307
G GS G+LG + S D +L + AL G + + +CG HS ALT G +++W
Sbjct: 3987 ACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSW 4043
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G R R I L VQ+ +CG H+ V DG++
Sbjct: 4044 GDGDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLF 4093
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLA 412
+G YG+ ++ P V G ++ ++A G H+ ++
Sbjct: 4094 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 4139
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VSE EVY WG S QL G +E + + +A + + G + +++ G
Sbjct: 368 VSETCEVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ A G G+LGLG +L + + R+I + G HTL +
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RSIKKVSSSKG------SDGHTLAFTT 475
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+G + WG YG+ + S+ YP + + G+V ++AG HSA + +
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
>gi|379721973|ref|YP_005314104.1| hypothetical protein PM3016_4177 [Paenibacillus mucilaginosus 3016]
gi|378570645|gb|AFC30955.1| hypothetical protein PM3016_4177 [Paenibacillus mucilaginosus 3016]
Length = 337
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 148/332 (44%), Gaps = 61/332 (18%)
Query: 87 GANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWV 146
G+ + QLGDGT+ R P VK L S V IS G + A+ +DGT W
Sbjct: 4 GSQQHAQLGDGTKTDRYSPIPVKNLDS--VIGISAGGAASFAV----RSDGTA-----WA 52
Query: 147 WGQN------QGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECGLLQAWGYNE 195
WG N G+ + RL TP + + + GS H +A+ G + AWG+N
Sbjct: 53 WGSNLFGQLGDGTTYDRL-----TPVQVQGLHSVVALEAGSSHSLAVKADGSVWAWGWNT 107
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
YGQLG G T + P ++ L+ + V+ G HS AV +G V+ WG
Sbjct: 108 YGQLGDG-TTDSRSTPVQVQ----------ALDSVVAVAAGSGHSLAVKADGSVWAWGAN 156
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
GQLG + + +P +V L + V+ G S AL S G ++AWG + +GQL
Sbjct: 157 WSGQLGDGTYT---ESTVPVQVTGLGSVV--SVSAGNTFSSALKSDGTVWAWGANDSGQL 211
Query: 316 GLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS---HTLVYMRDGRIHGWGYN 372
G S+T N P V G+ A S ++L DG + WGYN
Sbjct: 212 G--------------SETAASNSPSPVQVTGMASAAAISSGSDYSLALKNDGTVWAWGYN 257
Query: 373 SYGQAANEKSTYAWYPSPVDWCVGEVRKLAAG 404
S GQ N +T + P V +G V +AAG
Sbjct: 258 SSGQLGNGTTTSSSAPVQVT-RLGSVVSVAAG 288
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 143/324 (44%), Gaps = 56/324 (17%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
+ I+ G + AV SDGT + WG+N FGQLGDGT R P +V+ L S V ++ G+
Sbjct: 32 IGISAGGAASFAVRSDGTAWAWGSNLFGQLGDGTTYDRLTPVQVQGLHS--VVALEAGSS 89
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTI-----ICQVS 173
+ A+ + DG++ W WG N G+ R TP + + V+
Sbjct: 90 HSLAV----KADGSV-----WAWGWNTYGQLGDGTTDSR-----STPVQVQALDSVVAVA 135
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
GS H +A+ G + AWG N GQLG G E P + G L + V
Sbjct: 136 AGSGHSLAVKADGSVWAWGANWSGQLGDGTYTESTV-PVQVTG----------LGSVVSV 184
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
S G S+A+ +G V+ WG GQLG + S P +V +
Sbjct: 185 SAGNTFSSALKSDGTVWAWGANDSGQLGSETAASNSPS--PVQVTGMASAAAISSGSD-- 240
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG-VQLVAC 352
+S AL + G ++AWG + +GQLG G T S + P+ V G V VA
Sbjct: 241 YSLALKNDGTVWAWGYNSSGQLGNGTTTSS-------------SAPVQVTRLGSVVSVAA 287
Query: 353 GHSHTLVYMRDGRIHGWGYNSYGQ 376
G H L G + WG N+YGQ
Sbjct: 288 GPLHGLAVQSGGTVWDWGNNTYGQ 311
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 145/325 (44%), Gaps = 50/325 (15%)
Query: 2 DINEIIGETARPVDNIPAKS--AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
+++ +IG +A + +S + WG N GQ G G P Q+ G
Sbjct: 27 NLDSVIGISAGGAASFAVRSDGTAWAWGSNLFGQLG-DGTTYDRLTPVQVQ--------G 77
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
+S + + G H+ AV +DG+++ WG N +GQLGDGT + R P +V+ L S V ++
Sbjct: 78 LHSV-VALEAGSSHSLAVKADGSVWAWGWNTYGQLGDGTTDSRSTPVQVQALDS--VVAV 134
Query: 120 SCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI---------IC 170
+ G+ + A+ + DG++ W WG N G +T +T+ +
Sbjct: 135 AAGSGHSLAV----KADGSV-----WAWGANWSGQLGD---GTYTESTVPVQVTGLGSVV 182
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
VS G+ AL G + AWG N+ GQLG P + G A + +
Sbjct: 183 SVSAGNTFSSALKSDGTVWAWGANDSGQLGSETAASNSPSPVQVTGMASAAAISSGSD-- 240
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
+S A+ +G V+ WG S GQLG+ + S P +V L + VA
Sbjct: 241 --------YSLALKNDGTVWAWGYNSSGQLGNGTTTSSSA---PVQVTRLGSVV--SVAA 287
Query: 291 GGVHSCALTSKGALYAWGGSQAGQL 315
G +H A+ S G ++ WG + GQL
Sbjct: 288 GPLHGLAVQSGGTVWDWGNNTYGQL 312
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 118/268 (44%), Gaps = 39/268 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +++ WG+N GQ G G P Q+ A + +A G H+ A
Sbjct: 94 VKADGSVWAWGWNTYGQLG-DGTTDSRSTPVQVQ---------ALDSVVAVAAGSGHSLA 143
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V +DG+++ WGAN GQLGDGT P +V L S V S+S G ++A+ ++D
Sbjct: 144 VKADGSVWAWGANWSGQLGDGTYTESTVPVQVTGLGS--VVSVSAGNTFSSAL----KSD 197
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQ 189
GT+ W WG N + +P+ + +S GS + +AL G +
Sbjct: 198 GTV-----WAWGANDSGQLGSETAASNSPSPVQVTGMASAAAISSGSDYSLALKNDGTVW 252
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
AWGYN GQLG G T +V + L + V+ G H AV G V
Sbjct: 253 AWGYNSSGQLGNGTTTSSSAPVQVTR-----------LGSVVSVAAGPLHGLAVQSGGTV 301
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRV 277
+ WG + GQLG G LP +V
Sbjct: 302 WDWGNNTYGQLGDGYFGGGYDRSLPFQV 329
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 93/221 (42%), Gaps = 31/221 (14%)
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G ++ QLG G + P +K L+ + +S G S AV +G +
Sbjct: 4 GSQQHAQLGDGTKTDRYS-PIPVK----------NLDSVIGISAGGAASFAVRSDGTAWA 52
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG GQLG + L P +V L + + G HS A+ + G+++AWG +
Sbjct: 53 WGSNLFGQLGDGTTY---DRLTPVQVQGLHSVVALE--AGSSHSLAVKADGSVWAWGWNT 107
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQLVACGHSHTLVYMRDGRIHGWG 370
GQLG G T R+ P+ V + V VA G H+L DG + WG
Sbjct: 108 YGQLGDGT-------------TDSRSTPVQVQALDSVVAVAAGSGHSLAVKADGSVWAWG 154
Query: 371 YNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
N GQ + T + P V +G V ++AG S+ L
Sbjct: 155 ANWSGQLGDGTYTESTVPVQVT-GLGSVVSVSAGNTFSSAL 194
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 257 VGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+G H L G K P V LD + ++ GG S A+ S G +AWG + GQ
Sbjct: 3 LGSQQHAQLGDGTKTDRYSPIPVKNLDSVI--GISAGGAASFAVRSDGTAWAWGSNLFGQ 60
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWGYNS 373
LG G TY R P+ V + V + G SH+L DG + WG+N+
Sbjct: 61 LGDGT-------------TYDRLTPVQVQGLHSVVALEAGSSHSLAVKADGSVWAWGWNT 107
Query: 374 YGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS-AVLAD 413
YGQ + + P V + V +AAG GHS AV AD
Sbjct: 108 YGQLGDGTTDSRSTPVQVQ-ALDSVVAVAAGSGHSLAVKAD 147
>gi|432106315|gb|ELK32196.1| RCC1 and BTB domain-containing protein 1 [Myotis davidii]
Length = 531
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 140/304 (46%), Gaps = 39/304 (12%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V D +F +G N LG G + P+K++ L + +KS+S G+ ++ D
Sbjct: 37 VTEDDEVFVFGLNYSNCLGTGDNQSTLTPKKLEALCGKKIKSLSYGSGPHVLLST---ED 93
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQV---SCGSVHVVALSECGL 187
G + + WG N G+ + N +I QV +CGS H VAL+ G
Sbjct: 94 GVV-----YAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSVALAADGE 148
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWGYN GQ+G G T PR + ++++ ++CG+ S AV + G
Sbjct: 149 VFAWGYNNCGQVGSGSTANQ-PTPRKVTN-------CLHIKRVVGIACGQTSSMAVLDTG 200
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
EVY WG GQLG L + +L P RV AL + + + CG H+ ALT +G LYAW
Sbjct: 201 EVYGWGYNGNGQLG---LGNNVNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAW 257
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRI 366
G + GQLG G + S P + V++ AC +HT + G +
Sbjct: 258 GANTYGQLGTGNKNNLLS--PTHIMVEKERV--------VEIAACHSAHTSAAKTQGGHV 307
Query: 367 HGWG 370
+ WG
Sbjct: 308 YMWG 311
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 114/238 (47%), Gaps = 34/238 (14%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HV+ +E G++ AWG+N Y QLG G T +G+ +V ++++ +V+CG
Sbjct: 86 HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLL--------IKQVVEVACGS 137
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV---ACGGVH 294
+HS A++ +GEV+ WG + GQ+G S + + PR+V + + IK V ACG
Sbjct: 138 HHSVALAADGEVFAWGYNNCGQVGSGSTAN---QPTPRKVT--NCLHIKRVVGIACGQTS 192
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG---VQLVA 351
S A+ G +Y WG + GQLGLG + P+ V V +
Sbjct: 193 SMAVLDTGEVYGWGYNGNGQLGLGNNVNQLT-------------PVRVAALHSVCVNQIV 239
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
CG++HTL +G ++ WG N+YGQ SP V + R + HSA
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLL--SPTHIMVEKERVVEIAACHSA 295
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 112/452 (24%), Positives = 180/452 (39%), Gaps = 69/452 (15%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG+N Q G G Q P Q+ C + +++ACG H+ A+A+DG
Sbjct: 95 VVYAWGHNGYSQLGN-GTTNQGIAPIQV------CTNLLIKQVVEVACGSHHSVALAADG 147
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+F WG N GQ+G G+ + P KV L + V I+CG + A+ +
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAV---------LD 198
Query: 141 TSRLWVWGQN------QGSNFPRLFWGAFTPNTIIC--QVSCGSVHVVALSECGLLQAWG 192
T ++ WG N G+N +L +C Q+ CG H +AL++ GLL AWG
Sbjct: 199 TGEVYGWGYNGNGQLGLGNNVNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G L ++ E E++ ++ +C H SAA ++ G VY
Sbjct: 259 ANTYGQLGTGNKNNLLSPTHIM----------VEKERVVEIAACHSAHTSAAKTQGGHVY 308
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC-GGVHSCALTSKGALYAWGG 309
W G C G +LP + ++C V +C T +
Sbjct: 309 MW--------GQC---RGQSVVLPH---------LTHLSCTDDVFACFATPAVSWRLLSV 348
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFR-NIPILVVPNGVQLVACGHSHTLVYMRDGRIHG 368
L + + P +D FR + + V V + C H ++
Sbjct: 349 EHEDFLTVAESLKKEFDSPETADLKFRIDGKYIHVHKAVLKIRCEHFRSMFQSY------ 402
Query: 369 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL----AAGGGHSAVLADACSLKELCEFR 424
W + ++ +Y Y + + + + L A G A LK+LC+
Sbjct: 403 WNEDMKEVIEIDQFSYPVYRAFLQFLYTDTVDLPPEDAIGLLDLATSYCENRLKKLCQHI 462
Query: 425 LAESVTLSNASEIEDVASRTGSEALARLCERL 456
+ + +T+ NA + A R +E L C +
Sbjct: 463 IKQGITVENAFSLFSAAVRYDAEDLEEFCFKF 494
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 132/317 (41%), Gaps = 45/317 (14%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G +A + ++V+G N+S G G + PK+L G + L
Sbjct: 26 VFGTSANEALYVTEDDEVFVFGLNYSNCLG-TGDNQSTLTPKKLEA-----LCGKKIKSL 79
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV-KQLQSEFVKSISCGAH 124
G H DG ++ WG N + QLG+GT P +V L + V ++CG+H
Sbjct: 80 SYGSG-PHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSH 138
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQ------GSN----FPRLFWGAFTPNTIICQVSC 174
+ A+A E ++ WG N GS PR ++ ++C
Sbjct: 139 HSVALAADGE---------VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVV-GIAC 188
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G +A+ + G + WGYN GQLG G L RV A + Q+
Sbjct: 189 GQTSSMAVLDTGEVYGWGYNGNGQLGLGNNVNQLTPVRV---------AALHSVCVNQIV 239
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGG 292
CG H+ A+++ G +Y WG + GQLG +G+K L P ++ ++ AC
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLG-----TGNKNNLLSPTHIMVEKERVVEIAACHS 294
Query: 293 VH-SCALTSKGALYAWG 308
H S A T G +Y WG
Sbjct: 295 AHTSAAKTQGGHVYMWG 311
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 83/173 (47%), Gaps = 17/173 (9%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHSCALT 299
V+E+ EV+ +GL LG +GD + L P+++ AL G IK ++ G G H T
Sbjct: 37 VTEDDEVFVFGLNYSNCLG-----TGDNQSTLTPKKLEALCGKKIKSLSYGSGPHVLLST 91
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
G +YAWG + QLG G + + I ++ L++ V+ VACG H++
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTN--------LLIKQVVE-VACGSHHSVA 142
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
DG + WGYN+ GQ + + P V C+ R + G ++ +A
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMA 195
>gi|410988349|ref|XP_004000448.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Felis
catus]
Length = 993
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 124/408 (30%), Positives = 190/408 (46%), Gaps = 43/408 (10%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++CG EHTA V + L+ +G+N +GQLG G++ P VK L+ E VK +CG + T
Sbjct: 40 LSCGDEHTAVVTGNKKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99
Query: 127 AAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
E + G + +L + + + F + + FT I Q+S GS AL+E
Sbjct: 100 LVSTEGGKVYAAGGNNEGQLGLGDTEERNTFHLISF--FTSQHKIKQLSAGSNTSAALTE 157
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G L WG N GQ+G +V G + I+ +SCG YHSA V+
Sbjct: 158 DGELFMWGDNSEGQIGLKDVTNVCVPQQVTVG-----------KPISWISCGYYHSAFVT 206
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
GE+YT+G G+LG + Q +P+ V + ++ VACGG H+ LT K A+
Sbjct: 207 TEGELYTFGEPESGKLGLPN-QLLCNHRMPQPVPGIPEKVVQ-VACGGGHTVVLTEK-AV 263
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 364
Y +G Q GQLGLG +F +T + V + ++CG +HT + G
Sbjct: 264 YTFGLGQFGQLGLG----TFLF-----ETSVPKVIEHVKDQKISSISCGENHTALITDIG 314
Query: 365 RIHGWGYNSYGQ--AANEKSTYAWYPSPVDWCVGEVRKLAA-GGGHSAVLA-------DA 414
++ +G YG+ E T + P+ + + +L + GG H V A +
Sbjct: 315 LMYTFGDGRYGKLGLGLENFTNQFLPTLCSHFLRFIAQLVSCGGCHMLVFAVPRLGGTEE 374
Query: 415 CSLKELCE--FRLAESVTLSNASEIEDVASRTGSEALARLCERLREHS 460
L+E+ + F S+ LSN + +V T S AR+ R RE S
Sbjct: 375 IELEEVKDACFHAEASLPLSNLNS-GNVLQTTLS---ARVRRREREKS 418
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 122/280 (43%), Gaps = 39/280 (13%)
Query: 144 LWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
++ +G+ + N P FW N I +SCG H ++ L +G N +GQLG G
Sbjct: 14 VFTFGKTRFAENIPSKFWFK---NDIPTVLSCGDEHTAVVTGNKKLYMFGSNNWGQLGLG 70
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
+ + P +K A + EK+ +CG H+ +E G+VY G + GQLG
Sbjct: 71 -SKSTVSKPTCVK--------ALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLG- 120
Query: 263 CSLQSGDKELLPRRVVALDGIF-----IKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GD E R L F IK ++ G S ALT G L+ WG + GQ+GL
Sbjct: 121 ----LGDTE--ERNTFHLISFFTSQHKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGL 174
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ- 376
T +P + + V + ++CG+ H+ +G ++ +G G+
Sbjct: 175 KDVTN--VCVPQQ----------VTVGKPISWISCGYYHSAFVTTEGELYTFGEPESGKL 222
Query: 377 -AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADAC 415
N+ P PV +V ++A GGGH+ VL +
Sbjct: 223 GLPNQLLCNHRMPQPVPGIPEKVVQVACGGGHTVVLTEKA 262
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 38/195 (19%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+++WG N GQ G K + +P+Q+ G W I+CG+ H+A V ++G
Sbjct: 161 LFMWGDNSEGQIGLKDV-TNVCVPQQV-------TVGKPISW--ISCGYYHSAFVTTEGE 210
Query: 83 LFTWGANEFGQLGDGTEE--GRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
L+T+G E G+LG + + P+ V + + V+ ++CG T + E
Sbjct: 211 LYTFGEPESGKLGLPNQLLCNHRMPQPVPGIPEKVVQ-VACGGGHTVVLTE--------- 260
Query: 141 TSRLWVWGQNQGSNFPRLFWGAF-----TPNTI-------ICQVSCGSVHVVALSECGLL 188
++ +G Q F +L G F P I I +SCG H +++ GL+
Sbjct: 261 -KAVYTFGLGQ---FGQLGLGTFLFETSVPKVIEHVKDQKISSISCGENHTALITDIGLM 316
Query: 189 QAWGYNEYGQLGRGI 203
+G YG+LG G+
Sbjct: 317 YTFGDGRYGKLGLGL 331
>gi|449016322|dbj|BAM79724.1| similar to UVB-resistance protein UVR8 [Cyanidioschyzon merolae
strain 10D]
Length = 457
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 157/357 (43%), Gaps = 60/357 (16%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQ----LPPELFGCPAGANSRWLD----IACGHEH 73
A+Y G+ GQ G R R++ +P + L PE +++ L +ACG H
Sbjct: 82 ALYTVGHGLYGQLGLGQRIRRVSLPTRVRGVLGPEAITNVGRSSAVALPPIEAVACGRYH 141
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF------------------ 115
T AV+SDG LF+WG + G+LG GTE P V +Q +
Sbjct: 142 TFAVSSDGRLFSWGGGKNGRLGTGTELRSFLPWPVSTVQEKVPGQPGNVRRSLAIPSECQ 201
Query: 116 VKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQ-NQGS--NFPRLFWGAF-------TP 165
+ ++ CG H + A++ G + T +GQ GS + P L F P
Sbjct: 202 IVAVECGYHHSVALSA----IGVVYTCGWGAYGQLGHGSCNDEPSLLAVTFRDEHGNALP 257
Query: 166 NTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEG------------LQGPRV 213
N I +V+ G H + L++ G + +G NEYGQLG ++C+ PR+
Sbjct: 258 NLRIIKVASGDRHTLVLTDDGRIYGFGSNEYGQLGITMSCDQETAENPTSKQCVFSEPRL 317
Query: 214 IKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ--LGHCSLQSGDKE 271
+ G A +I Q++CGE HS A+S+ GEV WG G GQ LG + +
Sbjct: 318 LTGGAL------AGRRIAQIACGERHSVALSDQGEVICWGHGMSGQLGLGESITMTPTPQ 371
Query: 272 LLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIP 328
+L R L + +ACG ++ L S +Y G + G LG+G + P
Sbjct: 372 ILNTRNSPLASRRVTGIACGHENTLFLVSDNEIYVTGSGEYGLLGIGAGAPRMAFEP 428
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 175/417 (41%), Gaps = 81/417 (19%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFG---CPAGANSRWLDIACGHEHTAA 76
+ A+ VWG + + G E + P +LP + + L +ACG HTA
Sbjct: 17 QPALVVWGRAKNHRLGIPYAEGDIFQPSELPKIVLDRLVSDRRTPNHVLQVACGGSHTAI 76
Query: 77 VASDGTLFTWGANEFGQLGDGTE----------EGRKHPEKVKQLQSEF------VKSIS 120
+ +G L+T G +GQLG G G PE + + +++++
Sbjct: 77 LLRNGALYTVGHGLYGQLGLGQRIRRVSLPTRVRGVLGPEAITNVGRSSAVALPPIEAVA 136
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNF-------PRLFWGAFT--------P 165
CG + T A++ S RL+ WG + L W T P
Sbjct: 137 CGRYHTFAVS---------SDGRLFSWGGGKNGRLGTGTELRSFLPWPVSTVQEKVPGQP 187
Query: 166 NTI-----------ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVI 214
+ I V CG H VALS G++ G+ YGQLG G +C P ++
Sbjct: 188 GNVRRSLAIPSECQIVAVECGYHHSVALSAIGVVYTCGWGAYGQLGHG-SCN--DEPSLL 244
Query: 215 KGYAKFLDE----APELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG---HCSLQS 267
F DE P L +I +V+ G+ H+ ++++G +Y +G GQLG C ++
Sbjct: 245 A--VTFRDEHGNALPNL-RIIKVASGDRHTLVLTDDGRIYGFGSNEYGQLGITMSCDQET 301
Query: 268 GDKELL-------PRRVV--ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLG 318
+ PR + AL G I +ACG HS AL+ +G + WG +GQLGLG
Sbjct: 302 AENPTSKQCVFSEPRLLTGGALAGRRIAQIACGERHSVALSDQGEVICWGHGMSGQLGLG 361
Query: 319 PQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
S ++ P RN P+ V +ACGH +TL + D I+ G YG
Sbjct: 362 ---ESITMTPTPQILNTRNSPL--ASRRVTGIACGHENTLFLVSDNEIYVTGSGEYG 413
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 104/329 (31%), Positives = 143/329 (43%), Gaps = 57/329 (17%)
Query: 157 RLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG---------ITCEG 207
RL TPN ++ QV+CG H L G L G+ YGQLG G G
Sbjct: 53 RLVSDRRTPNHVL-QVACGGSHTAILLRNGALYTVGHGLYGQLGLGQRIRRVSLPTRVRG 111
Query: 208 LQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCS--- 264
+ GP I + A L I V+CG YH+ AVS +G +++WG G G+LG +
Sbjct: 112 VLGPEAITNVGR--SSAVALPPIEAVACGRYHTFAVSSDGRLFSWGGGKNGRLGTGTELR 169
Query: 265 -----LQSGDKELLP------RRVVALDG-IFIKDVACGGVHSCALTSKGALYAWGGSQA 312
S +E +P RR +A+ I V CG HS AL++ G +Y G
Sbjct: 170 SFLPWPVSTVQEKVPGQPGNVRRSLAIPSECQIVAVECGYHHSVALSAIGVVYTCGWGAY 229
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGRIHGWGY 371
GQLG G SL+ FR+ +PN + VA G HTLV DGRI+G+G
Sbjct: 230 GQLGHGSCNDEPSLL----AVTFRDEHGNALPNLRIIKVASGDRHTLVLTDDGRIYGFGS 285
Query: 372 NSYGQ-----------AANEKSTYAWYPSPVDWCVG-----EVRKLAAGGGHSAVLADAC 415
N YGQ A N S + P G + ++A G HS L+D
Sbjct: 286 NEYGQLGITMSCDQETAENPTSKQCVFSEPRLLTGGALAGRRIAQIACGERHSVALSDQG 345
Query: 416 SLKELC-------EFRLAESVTLSNASEI 437
+ +C + L ES+T++ +I
Sbjct: 346 EV--ICWGHGMSGQLGLGESITMTPTPQI 372
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYF--RNIPILVVPNGVQLVACGHSHTLVY 360
AL WG ++ +LG+ P P+E R + PN V VACG SHT +
Sbjct: 19 ALVVWGRAKNHRLGI-PYAEGDIFQPSELPKIVLDRLVSDRRTPNHVLQVACGGSHTAIL 77
Query: 361 MRDGRIHGWGYNSYGQ 376
+R+G ++ G+ YGQ
Sbjct: 78 LRNGALYTVGHGLYGQ 93
>gi|356524449|ref|XP_003530841.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 444
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 117/353 (33%), Positives = 162/353 (45%), Gaps = 52/353 (14%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+++WG G+ G G E L +P L P L L +A G H+ A+ SDG
Sbjct: 120 ALWIWGKGDGGRLGF-GHENPLFVP-TLNPHL--------DNLLSVALGGLHSVALTSDG 169
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+FTWG FG LG P VK +K I+ TAAI E E
Sbjct: 170 EVFTWGYGGFGALGHSVYHRELFPRLVKGSWEGTIKHIATSGTHTAAITESGE------- 222
Query: 142 SRLWVWGQNQGSNFPRLFW--------GAFTPNTI------ICQVSCGSVHVVALSECGL 187
L++WG+++G L G P+ + I VSCG +AL+ G
Sbjct: 223 --LYIWGRDEGDGRLGLGPGRGPDHAGGLSIPSKVKELPYPIAAVSCGGFFTMALTVDGQ 280
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE--KITQVSCGEYHSAAVSE 245
L WG N +LGRG G + PR + P LE KI Q++ G YHS A+++
Sbjct: 281 LWNWGANSNYELGRGDKIGGWK-PRPV----------PSLENVKIIQLASGGYHSLALTD 329
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V +WG G GQLGH S+Q+ + +P V AL I ++CGG S A+T G LY
Sbjct: 330 DGKVLSWGHGGQGQLGHGSIQN---QKIPAVVEALAHENIIYISCGGSSSAAVTDNGKLY 386
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 358
WG + QLG+ P P E + + + P+ V VA G SH +
Sbjct: 387 MWGNANDSQLGI-PGLPPVQSCPVEVNFLMEDDGL--GPHKVLSVAIGASHAM 436
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 133/334 (39%), Gaps = 54/334 (16%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ +WG GQLG G EE R +P V A +A P+ +
Sbjct: 47 VLSWGKGASGQLGGGVEETRLYPSPV------------------ANLAVPKSS------- 81
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+ Q G R + + +SCG H + + G L WG + G+LG G
Sbjct: 82 --FALSQTPGR---RRLLPSPPKRALEVGLSCGLFHSSLIVD-GALWIWGKGDGGRLGFG 135
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
+ P + P L+ + V+ G HS A++ +GEV+TWG G G LGH
Sbjct: 136 -----HENPLFVPTLN------PHLDNLLSVALGGLHSVALTSDGEVFTWGYGGFGALGH 184
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
+EL PR V IK +A G H+ A+T G LY WG + G
Sbjct: 185 SVYH---RELFPRLVKGSWEGTIKHIATSGTHTAAITESGELYIWGRDE------GDGRL 235
Query: 323 SFSLIPNESDTYFRNIPILV--VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANE 380
+IP V +P + V+CG T+ DG++ WG NS +
Sbjct: 236 GLGPGRGPDHAGGLSIPSKVKELPYPIAAVSCGGFFTMALTVDGQLWNWGANSNYELGRG 295
Query: 381 KSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
W P PV ++ +LA+GG HS L D
Sbjct: 296 DKIGGWKPRPVPSLENVKIIQLASGGYHSLALTD 329
>gi|114657534|ref|XP_001174017.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1 [Pan
troglodytes]
gi|410226250|gb|JAA10344.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410226252|gb|JAA10345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410263976|gb|JAA19954.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410293838|gb|JAA25519.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410293840|gb|JAA25520.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410336799|gb|JAA37346.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
Length = 4861
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 195/430 (45%), Gaps = 70/430 (16%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
MD + T+RP D ++ K +Y+WG GQ GR + +P P
Sbjct: 3976 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMVPAAAP--------- 4024
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
+ S+ + CG T + ++GT+ G +G+LG G + + LQ V +
Sbjct: 4025 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQL 4084
Query: 120 --SCGAH-CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI---- 168
SCG+ + A+ E E ++ WG ++ +L G P I
Sbjct: 4085 VTSCGSDGHSMALTESGE---------VFSWGDG---DYGKLGHGNSDRQRRPRQIEALQ 4132
Query: 169 ---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV--IKGYAKFLDE 223
+ Q+SCG H ++ G L +G +YG+LG G T RV ++GY
Sbjct: 4133 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY------ 4186
Query: 224 APELEKITQVSCGEYHSAAVSENGE-VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG 282
+I QV+CG H+ AVS +G V+ +G G G+LG L + + P+++ L G
Sbjct: 4187 -----QIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLG---LGNSTAKSSPQKIDVLCG 4238
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
I IK VACG S ALT G +Y +G Q +GL P+ R+ + + IP+L
Sbjct: 4239 IGIKKVACGTQFSVALTKDGHVYTFG--QDRLIGL-PEGRA------RNHNRPQQIPVLA 4289
Query: 343 VPNGVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VR 399
GV + VA G HTL +G ++ WG NS GQ + + P+ V G+ VR
Sbjct: 4290 ---GVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVR 4346
Query: 400 KLAAGGGHSA 409
+++AG HSA
Sbjct: 4347 QISAGRCHSA 4356
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 182/405 (44%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ PK P + S I G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQ-PKLAP---------SFSDAQTIEAGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG----T 138
+ G +G+LG G + +K+L E +SI ++ + +DG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQS---TLKKLTFEPHRSIK-------KVSSSKGSDGHTLAF 473
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ ++ WG + +P+L G ++C VS G H A++E G L
Sbjct: 474 TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGEL 532
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G + P ++K ++ + +VSCG H+ A+S++G
Sbjct: 533 YTWGEGDFGRLGHGDS-NSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 581
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ + AL G+FI+ V G S ALTS G +Y
Sbjct: 582 TVWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVY 636
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V V+ G SH L D
Sbjct: 637 AWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-VSIGDSHCLALSHDNE 685
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 141/307 (45%), Gaps = 43/307 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V SDG
Sbjct: 4103 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTSDGK 4154
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A+ ++ S
Sbjct: 4155 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV--------SVDGS 4206
Query: 143 RLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T P I I +V+CG+ VAL++ G + +
Sbjct: 4207 MVWAFGDG---DYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4263
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ I A + I V+ G H+ A++ NG+VY
Sbjct: 4264 GQDRLIGLPEG-RARNHNRPQQIPVLAGVI--------IEDVAVGAEHTLALASNGDVYA 4314
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWGGS 310
WG S GQLG L + P V L G ++ ++ G HS A T+ A G S
Sbjct: 4315 WGSNSEGQLG---LGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVS 4371
Query: 311 QAGQLGL 317
QLGL
Sbjct: 4372 VPLQLGL 4378
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P I I +V GS +AL+ G + AW
Sbjct: 583 -VWSFG---GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I VS G+ H A+S + EVY
Sbjct: 639 GCG--ACLGCGSSEATALRPKLIEELAA--------TRIVDVSIGDSHCLALSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDGI I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 97/226 (42%), Gaps = 29/226 (12%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +GQL G V+ A AP + QV CG+ + + NG V
Sbjct: 4002 WGAGRHGQLAEA-------GRNVMVPAA-----APSFSQAQQVICGQNCTFVIQANGTVL 4049
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGALYAW 307
G GS G+LG + S D +L + AL G + + +CG HS ALT G +++W
Sbjct: 4050 ACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSW 4106
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G R R I L VQ+ +CG H+ V DG++
Sbjct: 4107 GDGDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLF 4156
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLA 412
+G YG+ ++ P V G ++ ++A G H+ ++
Sbjct: 4157 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 4202
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VSE EVY WG S QL G +E + + +A + + G + +++ G
Sbjct: 368 VSETCEVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ A G G+LGLG +L + + R+I + G HTL +
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RSIKKVSSSKG------SDGHTLAFTT 475
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+G + WG YG+ + S+ YP + + G+V ++AG HSA + +
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
>gi|414586169|tpg|DAA36740.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 1056
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 119/416 (28%), Positives = 170/416 (40%), Gaps = 62/416 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDI---ACGHEHTAAVAS 79
IYVWG R G +R P L P +N LD+ ACG +H A V
Sbjct: 222 IYVWGEVICDTISRSGSDRSAYSPGTTTDVLVPKPLESNV-MLDVSYVACGVKHAALVTR 280
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
+FTWG G+LG G P V+ L + V+ I+CG T A+
Sbjct: 281 QAEVFTWGEECSGRLGHGIGTNVFQPRLVESLSTCNVELIACGEFHTCAVT--------- 331
Query: 140 STSRLWVWGQ--------NQGSN----FPRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
+T L+ WG GSN P+ G + VSCG+ H ++ G
Sbjct: 332 ATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLD-GLPVSAVSCGTWHTALITSSGQ 390
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE-- 245
L +G +G LG G R Y K ++ L I+ VSCG +H+AAV E
Sbjct: 391 LYTFGDGTFGVLG--------HGNRASCSYPKEVESLKGLRTIS-VSCGVWHTAAVVEVI 441
Query: 246 -------NGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHSC 296
+G+++TWG G +LGH GD+ +L P V +L ACG +
Sbjct: 442 ISQSNASSGKLFTWGDGDKYRLGH-----GDRSSKLKPTCVPSLIDYNFHKAACGHTLTI 496
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
LT+ G ++ G GQLG PN Y R + + GV VACG H
Sbjct: 497 GLTTSGHIFTVGSPVYGQLG----------NPNNDGRYPRLVEEQLGGGGVVEVACGSYH 546
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 411
V G ++ WG + G+ + P+ V+ V+++A G +A +
Sbjct: 547 VAVLTNAGEVYTWGKGTNGRLGHGDIADRKVPTLVEALKDRSVKRVACGSSFTAAI 602
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 138/295 (46%), Gaps = 35/295 (11%)
Query: 17 IPAKSAIYVWG--YNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHT 74
+ A +Y WG +++G G G IPK++ L G P A ++CG HT
Sbjct: 330 VTATGDLYTWGDGTHNAGLLGH-GSNVSHWIPKRVSGPLDGLPVSA------VSCGTWHT 382
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
A + S G L+T+G FG LG G +P++V+ L+ S+SCG TAA+ E
Sbjct: 383 ALITSSGQLYTFGDGTFGVLGHGNRASCSYPKEVESLKGLRTISVSCGVWHTAAVVEVII 442
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALS 183
+ S+ +L+ WG G + RL G P + + +CG + L+
Sbjct: 443 SQSNASSGKLFTWG--DGDKY-RLGHGDRSSKLKPTCVPSLIDYNFHKAACGHTLTIGLT 499
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
G + G YGQLG P Y + ++E + +V+CG YH A +
Sbjct: 500 TSGHIFTVGSPVYGQLG---------NPNNDGRYPRLVEEQLGGGGVVEVACGSYHVAVL 550
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
+ GEVYTWG G+ G+LGH + D++ +P V AL +K VACG + A+
Sbjct: 551 TNAGEVYTWGKGTNGRLGHGDI--ADRK-VPTLVEALKDRSVKRVACGSSFTAAI 602
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 63/128 (49%), Gaps = 16/128 (12%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
+++ACG H A + + G ++TWG G+LG G RK P V+ L+ VK ++CG+
Sbjct: 538 VEVACGSYHVAVLTNAGEVYTWGKGTNGRLGHGDIADRKVPTLVEALKDRSVKRVACGSS 597
Query: 125 CTAAIAEPRENDGTISTSRLWVWG--QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVAL 182
TAAI + + WV G Q+Q S + F FT C +CG VH +
Sbjct: 598 FTAAICQHK-----------WVSGMEQSQCSACRQPF--GFTRKRHNC-YNCGLVHCHSC 643
Query: 183 SECGLLQA 190
S L+A
Sbjct: 644 SSKKALRA 651
>gi|47214261|emb|CAG01938.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1055
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 153/364 (42%), Gaps = 92/364 (25%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++Y G N GQ G PEL G A R ++CG H+ AV G
Sbjct: 53 SVYTCGSNGCGQLGHN--------KPGTSPELVG--ALDTQRITLVSCGQAHSMAVNEQG 102
Query: 82 TLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGTI 139
+F WGA + GQLG GT E + P +K+L + + CG HC A DG
Sbjct: 103 QVFAWGAGDGGQLGLGTTEAAVRIPRLIKRLCDHRIAQVMCGNQHCIAL-----SKDG-- 155
Query: 140 STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQ------------VSCGSVHVVALSECGL 187
+L+ WGQN +L G P+ + Q ++ G H ALS G
Sbjct: 156 ---QLFTWGQNTSG---QLGLGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGA 209
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS--- 244
+ WG N+ GQLG + R + + KFL +K+ +SCG+ H+AA++
Sbjct: 210 VFGWGKNKAGQLGLNDIQD-----RAVPCHIKFLRS----QKVVHISCGDEHTAALTKVR 260
Query: 245 ---------------------------------------ENGEVYTWGLGSVGQLGHCSL 265
++G ++T+G GS GQLGH
Sbjct: 261 IRSASQCFRTSGGRCSNPFFCQRIGCSHSTRVTILLWLFQDGGLFTFGDGSWGQLGH--- 317
Query: 266 QSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYAWGGSQAGQLGLGPQTRSF 324
S ELLPRRV+ L G + + CG H+ A S G +YA+GG+ GQLG G +
Sbjct: 318 GSTSNELLPRRVLELMGTEVSQITCGRHHTLAFAPSSGVVYAFGGNSHGQLGTGELSAEK 377
Query: 325 SLIP 328
L P
Sbjct: 378 CLYP 381
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 132/283 (46%), Gaps = 38/283 (13%)
Query: 83 LFTWGANEFGQLGDGTEEGRK-HPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+ WG + GQLG E P +K CG + + +DG++ T
Sbjct: 1 MLCWGKAKDGQLGIEVERNSMFEPRNCNVFSGRGLKEAVCGGQHSVFLL----HDGSVYT 56
Query: 142 ---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQ 198
+ G N+ P L GA I VSCG H +A++E G + AWG + GQ
Sbjct: 57 CGSNGCGQLGHNKPGTSPELV-GALDTQRITL-VSCGQAHSMAVNEQGQVFAWGAGDGGQ 114
Query: 199 LGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVG 258
LG G T ++ PR+IK +I QV CG H A+S++G+++TWG + G
Sbjct: 115 LGLGTTEAAVRIPRLIKRLCD--------HRIAQVMCGNQHCIALSKDGQLFTWGQNTSG 166
Query: 259 QLGHCSLQSGD-KELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
QLG L G+ +L P+ + +L GI + + GG HS AL+ GA++ WG ++AGQLGL
Sbjct: 167 QLG---LGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGL 223
Query: 318 GPQTRSFSLIPNESDTYFRNIPI---LVVPNGVQLVACGHSHT 357
+D R +P + V ++CG HT
Sbjct: 224 -------------NDIQDRAVPCHIKFLRSQKVVHISCGDEHT 253
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 115/467 (24%), Positives = 180/467 (38%), Gaps = 108/467 (23%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFT 85
WG GQ G + + P+ C + + CG +H+ + DG+++T
Sbjct: 4 WGKAKDGQLGIEVERNSMFEPR-------NCNVFSGRGLKEAVCGGQHSVFLLHDGSVYT 56
Query: 86 WGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLW 145
G+N GQLG + PE V L ++ + +SCG + A+ E +++
Sbjct: 57 CGSNGCGQLGHN--KPGTSPELVGALDTQRITLVSCGQAHSMAVNE---------QGQVF 105
Query: 146 VWGQNQGSNF-----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
WG G PRL + I QV CG+ H +ALS+ G L WG N
Sbjct: 106 AWGAGDGGQLGLGTTEAAVRIPRLI--KRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQN 163
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
GQLG G P+ +K A + +++ G HS A+S +G V+ WG
Sbjct: 164 TSGQLGLGKGEPSKLFPQPLKSLAGI--------PLAKITAGGDHSFALSLSGAVFGWGK 215
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS-------------- 300
GQLG +Q +P + L + ++CG H+ ALT
Sbjct: 216 NKAGQLGLNDIQD---RAVPCHIKFLRSQKVVHISCGDEHTAALTKVRIRSASQCFRTSG 272
Query: 301 ----------------------------KGALYAWGGSQAGQLGLGPQTRSFSLIPNESD 332
G L+ +G GQLG G + S L+P
Sbjct: 273 GRCSNPFFCQRIGCSHSTRVTILLWLFQDGGLFTFGDGSWGQLGHG--STSNELLPRRV- 329
Query: 333 TYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ--AANEKSTYAWYPS 389
+ ++ V + CG HTL + G ++ +G NS+GQ + YP
Sbjct: 330 -------LELMGTEVSQITCGRHHTLAFAPSSGVVYAFGGNSHGQLGTGELSAEKCLYPV 382
Query: 390 PVDWCVGE----------VRKLAAGGGHSAVL-ADACSLKELCEFRL 425
++ G V K+ GG HS +L ++ SL+ +FR+
Sbjct: 383 KINLLSGNNHRTDSKKYSVTKITCGGDHSFLLYSNEQSLEYPEDFRV 429
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 129/288 (44%), Gaps = 38/288 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N SGQ G E P+ L L G P I G +H+ A++ G
Sbjct: 157 LFTWGQNTSGQLGLGKGEPSKLFPQPLK-SLAGIPLA------KITAGGDHSFALSLSGA 209
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F WG N+ GQLG + R P +K L+S+ V ISCG TAA+ + R S S
Sbjct: 210 VFGWGKNKAGQLGLNDIQDRAVPCHIKFLRSQKVVHISCGDEHTAALTKVRIR----SAS 265
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+ + + SN F I C S ++ L + G L +G +GQLG G
Sbjct: 266 QCFRTSGGRCSN-------PFFCQRIGCSHSTRVTILLWLFQDGGLFTFGDGSWGQLGHG 318
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS-ENGEVYTWGLGSVGQLG 261
T L RV++ +++Q++CG +H+ A + +G VY +G S GQLG
Sbjct: 319 STSNELLPRRVLELMGT---------EVSQITCGRHHTLAFAPSSGVVYAFGGNSHGQLG 369
Query: 262 HCSLQSGDKELLPRRVVALDG---------IFIKDVACGGVHSCALTS 300
L S +K L P ++ L G + + CGG HS L S
Sbjct: 370 TGEL-SAEKCLYPVKINLLSGNNHRTDSKKYSVTKITCGGDHSFLLYS 416
>gi|354474338|ref|XP_003499388.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Cricetulus griseus]
Length = 4859
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 195/430 (45%), Gaps = 70/430 (16%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
MD + T+RP D ++ K +Y+WG GQ GR + +P P
Sbjct: 3974 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMVPATAP--------- 4022
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
+ S+ + CG T + ++GT+ G +G+LG G + + LQ V +
Sbjct: 4023 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQL 4082
Query: 120 --SCGAH-CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI---- 168
SCG+ + A+ E E ++ WG ++ +L G P I
Sbjct: 4083 VTSCGSDGHSMALTESGE---------VFSWGDG---DYGKLGHGNSDRQRRPRQIEALQ 4130
Query: 169 ---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV--IKGYAKFLDE 223
+ Q+SCG H ++ G L +G +YG+LG G T RV ++GY
Sbjct: 4131 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY------ 4184
Query: 224 APELEKITQVSCGEYHSAAVSENGE-VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG 282
+I QV+CG H+ AVS +G V+ +G G G+LG L + + P++V L G
Sbjct: 4185 -----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCG 4236
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL- 341
I IK VACG S ALT G +Y +G Q +GL P+ R+ + + IP+L
Sbjct: 4237 IGIKKVACGTQFSVALTKDGHVYTFG--QDRLIGL-PEGRA------RNHNRPQQIPVLA 4287
Query: 342 -VVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VR 399
VV ++ VA G HTL G ++ WG NS GQ + + P+ V G+ +R
Sbjct: 4288 GVV---IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIR 4344
Query: 400 KLAAGGGHSA 409
+++AG HSA
Sbjct: 4345 QISAGRCHSA 4354
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 182/405 (44%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ PK P + S I G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQ-PKLAP---------SFSDAQTIEAGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG----T 138
+ G +G+LG G + +K+L E +SI ++ + +DG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQS---TLKKLTFEPHRSIK-------KVSSSKGSDGHTLAF 473
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ ++ WG + +P+L G ++C VS G H A++E G L
Sbjct: 474 TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGEL 532
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G + P ++K ++ + +VSCG H+ A+S++G
Sbjct: 533 YTWGEGDFGRLGHGDS-NSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 581
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ + AL G+FI+ V G S ALTS G +Y
Sbjct: 582 TVWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVY 636
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V ++ G SH L D
Sbjct: 637 AWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-ISIGDSHCLSLSHDNE 685
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 143/307 (46%), Gaps = 43/307 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V SDG
Sbjct: 4101 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTSDGK 4152
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG++
Sbjct: 4153 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA----DGSM--- 4205
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNT------IIC-----QVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T + ++C +V+CG+ VAL++ G + +
Sbjct: 4206 -VWAFGDG---DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4261
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ I A + I V+ G H+ A++ G+VY
Sbjct: 4262 GQDRLIGLPEG-RARNHNRPQQIPVLAGVV--------IEDVAVGAEHTLALASTGDVYA 4312
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWGGS 310
WG S GQLG L + P V L G I+ ++ G HS A T+ A G S
Sbjct: 4313 WGSNSEGQLG---LGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPVPPRAPGVS 4369
Query: 311 QAGQLGL 317
QLGL
Sbjct: 4370 VPLQLGL 4376
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P I I +V GS +AL+ G + AW
Sbjct: 583 -VWSFG---GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I +S G+ H ++S + EVY
Sbjct: 639 GCG--ACLGCGSSEATALRPKLIEELAA--------TRIVDISIGDSHCLSLSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDGI I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 98/231 (42%), Gaps = 36/231 (15%)
Query: 191 WGYNEYGQL---GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
WG +GQL GR + AP + QV CG+ + + NG
Sbjct: 4000 WGAGRHGQLAEAGRNVMVPA---------------TAPSFSQAQQVICGQNCTFVIQANG 4044
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGAL 304
V G GS G+LG + S D +L + AL G + + +CG HS ALT G +
Sbjct: 4045 TVLACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEV 4101
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 364
++WG G+LG G R R I L VQ+ +CG H+ V DG
Sbjct: 4102 FSWGDGDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDG 4151
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
++ +G YG+ ++ P V G ++ ++A G H+ AV AD
Sbjct: 4152 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 4202
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VSE EVY WG S QL G +E + + +A + + G + +++ G
Sbjct: 368 VSETCEVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ A G G+LGLG +L + + R+I + G HTL +
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RSIKKVSSSKG------SDGHTLAFTT 475
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+G + WG YG+ + S+ YP + + G+V ++AG HSA + +
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
>gi|410336797|gb|JAA37345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
Length = 4854
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 195/430 (45%), Gaps = 70/430 (16%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
MD + T+RP D ++ K +Y+WG GQ GR + +P P
Sbjct: 3969 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMVPAAAP--------- 4017
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
+ S+ + CG T + ++GT+ G +G+LG G + + LQ V +
Sbjct: 4018 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQL 4077
Query: 120 --SCGAH-CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI---- 168
SCG+ + A+ E E ++ WG ++ +L G P I
Sbjct: 4078 VTSCGSDGHSMALTESGE---------VFSWGDG---DYGKLGHGNSDRQRRPRQIEALQ 4125
Query: 169 ---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV--IKGYAKFLDE 223
+ Q+SCG H ++ G L +G +YG+LG G T RV ++GY
Sbjct: 4126 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY------ 4179
Query: 224 APELEKITQVSCGEYHSAAVSENGE-VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG 282
+I QV+CG H+ AVS +G V+ +G G G+LG L + + P+++ L G
Sbjct: 4180 -----QIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLG---LGNSTAKSSPQKIDVLCG 4231
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
I IK VACG S ALT G +Y +G Q +GL P+ R+ + + IP+L
Sbjct: 4232 IGIKKVACGTQFSVALTKDGHVYTFG--QDRLIGL-PEGRA------RNHNRPQQIPVLA 4282
Query: 343 VPNGVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VR 399
GV + VA G HTL +G ++ WG NS GQ + + P+ V G+ VR
Sbjct: 4283 ---GVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVR 4339
Query: 400 KLAAGGGHSA 409
+++AG HSA
Sbjct: 4340 QISAGRCHSA 4349
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 182/405 (44%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ PK P + S I G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQ-PKLAP---------SFSDAQTIEAGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG----T 138
+ G +G+LG G + +K+L E +SI ++ + +DG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQS---TLKKLTFEPHRSIK-------KVSSSKGSDGHTLAF 473
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ ++ WG + +P+L G ++C VS G H A++E G L
Sbjct: 474 TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGEL 532
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G + P ++K ++ + +VSCG H+ A+S++G
Sbjct: 533 YTWGEGDFGRLGHGDS-NSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 581
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ + AL G+FI+ V G S ALTS G +Y
Sbjct: 582 TVWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVY 636
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V V+ G SH L D
Sbjct: 637 AWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-VSIGDSHCLALSHDNE 685
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 141/307 (45%), Gaps = 43/307 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V SDG
Sbjct: 4096 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTSDGK 4147
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A+ ++ S
Sbjct: 4148 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV--------SVDGS 4199
Query: 143 RLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T P I I +V+CG+ VAL++ G + +
Sbjct: 4200 MVWAFGDG---DYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4256
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ I A + I V+ G H+ A++ NG+VY
Sbjct: 4257 GQDRLIGLPEG-RARNHNRPQQIPVLAGVI--------IEDVAVGAEHTLALASNGDVYA 4307
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWGGS 310
WG S GQLG L + P V L G ++ ++ G HS A T+ A G S
Sbjct: 4308 WGSNSEGQLG---LGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVS 4364
Query: 311 QAGQLGL 317
QLGL
Sbjct: 4365 VPLQLGL 4371
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P I I +V GS +AL+ G + AW
Sbjct: 583 -VWSFG---GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I VS G+ H A+S + EVY
Sbjct: 639 GCG--ACLGCGSSEATALRPKLIEELAA--------TRIVDVSIGDSHCLALSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDGI I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 97/226 (42%), Gaps = 29/226 (12%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +GQL G V+ A AP + QV CG+ + + NG V
Sbjct: 3995 WGAGRHGQLAEA-------GRNVMVPAA-----APSFSQAQQVICGQNCTFVIQANGTVL 4042
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGALYAW 307
G GS G+LG + S D +L + AL G + + +CG HS ALT G +++W
Sbjct: 4043 ACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSW 4099
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G R R I L VQ+ +CG H+ V DG++
Sbjct: 4100 GDGDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLF 4149
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLA 412
+G YG+ ++ P V G ++ ++A G H+ ++
Sbjct: 4150 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 4195
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VSE EVY WG S QL G +E + + +A + + G + +++ G
Sbjct: 368 VSETCEVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ A G G+LGLG +L + + R+I + G HTL +
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RSIKKVSSSKG------SDGHTLAFTT 475
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+G + WG YG+ + S+ YP + + G+V ++AG HSA + +
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
>gi|354489070|ref|XP_003506687.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Cricetulus griseus]
Length = 4836
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 177/411 (43%), Gaps = 67/411 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
++ ++VWG N Q G L+ K P + N + +A G + AV
Sbjct: 2959 RTKVFVWGLNDKDQLG------GLKGSKIKVPSFSETLSALNV--VQVAGGSKSLFAVTV 3010
Query: 80 DGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPREN 135
+G +++ G G+LG G G P ++ L S VK ++ G H TA
Sbjct: 3011 EGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV----- 3065
Query: 136 DGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
DG +++ WG+ PRL T I ++CGS H AL+
Sbjct: 3066 DG-----KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSS 3118
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGP--RVIKGYAKFLDEAPELEKITQVSCG--EYHSA 241
G L WG EYG+LG G L+ +V+ G+ ++ QV+CG + +
Sbjct: 3119 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-----------RVIQVACGSRDAQTL 3167
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A+++ G V++WG G G+LG + + +P+ + L+G + + CG S ALT
Sbjct: 3168 ALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTKS 3224
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLV 359
G ++ WG +LG G SD + R ++ G ++V A G H L
Sbjct: 3225 GVVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3272
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
G+++ WG N +GQ N +T P+ V G+ + ++A G HS
Sbjct: 3273 VTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3323
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3069 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 3120
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 3121 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 3173
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 3174 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3230
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV+++G+VY
Sbjct: 3231 GKGDYFRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDSGQVYA 3281
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3282 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3327
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 3008 VTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQI-----TALSSYVVKKVAVHSGGRHATA 3062
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+
Sbjct: 3063 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------ 3116
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 3117 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3170
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 3171 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 3221
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH S K P+ V L G I VA G +H A+T G
Sbjct: 3222 TKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDSGQ 3278
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 3279 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3325
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 144/327 (44%), Gaps = 50/327 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +D+A G H+A V + G
Sbjct: 4062 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRGIEV--VDVAAGGAHSACVTAAGD 4113
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG E + P+ V+ LQ V I+CG+ + +D T+
Sbjct: 4114 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLC--LTDDDTV--- 4168
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 4169 --WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4226
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 4227 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4277
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G + VACG H+ AW S+
Sbjct: 4278 NDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAWSTSKPAS 4325
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPIL 341
G P + +P E + + + IPI+
Sbjct: 4326 AGKLP-----AQVPMEYN-HLQEIPII 4346
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 174/411 (42%), Gaps = 76/411 (18%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P C A A R + + G + AV +DG
Sbjct: 3956 IYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALATLRPVQLIGGEQTLFAVTADG 4006
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 4007 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE------- 4059
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG+ + PR+ + V+ G H ++ G L
Sbjct: 4060 ---GEVYSWGEAEDGKLGHGNRSPCDRPRVIES--LRGIEVVDVAAGGAHSACVTAAGDL 4114
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSEN 246
WG YG+LG + + L+ P+++ EA + ++ ++C G+ + ++++
Sbjct: 4115 YTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVIDIACGSGDAQTLCLTDD 4165
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4166 DTVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 4222
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTL 358
WG +LG G SD + R P VQ +A G H +
Sbjct: 4223 WGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCV 4264
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
DG ++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4265 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4315
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 128/276 (46%), Gaps = 25/276 (9%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N P+L G + N + H +AL+ G + +WG + G+LG G
Sbjct: 472 RVYTQAYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG 531
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P+VI ++ + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 532 DTVP-LEEPKVISAFSG----KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 586
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + E +P V L G+ + DVACG + A+T G +++WG G+LG G
Sbjct: 587 ---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 643
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D V V CG ++ +DG+++ WG +
Sbjct: 644 DGCKTPKLIEKLQDL------------DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 691
Query: 379 NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ + YP ++ G +V +AAG H L +
Sbjct: 692 HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 124/253 (49%), Gaps = 30/253 (11%)
Query: 134 ENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N +GS + + QV+ GS + A++
Sbjct: 2953 ESTATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + + G G+LG G++ + PR I + ++ K V G H+ A++
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYV------VKKVAVHSGGRHATALTV 3065
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS ALTS G LY
Sbjct: 3066 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELY 3122
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRD 363
WG + G+LG G T L P + + +L+ +Q VACG + TL +
Sbjct: 3123 TWGLGEYGRLGHGDNTT--QLKP-------KMVKVLLGHRVIQ-VACGSRDAQTLALTDE 3172
Query: 364 GRIHGWGYNSYGQ 376
G + WG +G+
Sbjct: 3173 GLVFSWGDGDFGK 3185
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 134/310 (43%), Gaps = 53/310 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHC 125
+ G +H A++S+G +++WG E G+LG G P ++ L+ E V + GAH
Sbjct: 4046 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4105
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCG 175
A L+ WG+ + P+L A + +I ++CG
Sbjct: 4106 ACVTA----------AGDLYTWGKGRYGRLGHSDSEDQLKPKLV-EALQGHRVI-DIACG 4153
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + L++ + +WG +YG+LGRG +G + P I + +V
Sbjct: 4154 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVKV 4204
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G VYTWG G +LGH S D PR+V L G + +A G +
Sbjct: 4205 ECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSL 4261
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLV 350
H T G +Y WG + GQLG G T P LV V V
Sbjct: 4262 HCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRV 4308
Query: 351 ACGHSHTLVY 360
ACG +HTL +
Sbjct: 4309 ACGSAHTLAW 4318
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 45/285 (15%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+L A N + H A+A+ G +++WG + G+LG G + P+ +
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVI 542
Query: 109 KQLQ----SEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT 164
+ V I+CG+ +AAI E L+ WG+ N+ RL G+
Sbjct: 543 SAFSGKQAGKHVVHIACGSTYSAAITAEGE---------LYTWGRG---NYGRLGHGSSE 590
Query: 165 PNTI-----------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
I + V+CGS +A++E G + +WG +YG+LGRG +G + P
Sbjct: 591 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTP 649
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
++I+ + +V CG S A++++G+VY+WG G +LGH G +E
Sbjct: 650 KLIEKLQDL--------DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH-----GTEE 696
Query: 272 LL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ P+ + L G + DVA G H ALT +++WG + Q
Sbjct: 697 HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 137/295 (46%), Gaps = 37/295 (12%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG G+ G G L PK + G AG + + IACG ++AA
Sbjct: 511 LAATGEVYSWGCGDGGRLGH-GDTVPLEEPKVIS-AFSGKQAGKHV--VHIACGSTYSAA 566
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E P V L+ V ++CG+ +A
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA------ 620
Query: 137 GTISTSRLWVWGQ----------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
++W WG + G P+L + I +V CGS +AL++ G
Sbjct: 621 -VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVI--KVRCGSQFSIALTKDG 677
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ +WG + +LG G T E ++ P++++G + +K+ V+ G H A++E+
Sbjct: 678 QVYSWGKGDNQRLGHG-TEEHVRYPKLLEGL--------QGKKVIDVAAGSTHCLALTED 728
Query: 247 GEVYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
EV++W GS Q H +L+ E P + LD I +ACG S A +S
Sbjct: 729 SEVHSW--GSNDQCQHFDTLRVTKPE--PTALPGLDTKHIVGIACGPAQSFAWSS 779
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 97/212 (45%), Gaps = 28/212 (13%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ ++CGS + A++ G L WG YG+LG G + E P ++ G
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-SSEDEAIPMLVAGLKGL-------- 604
Query: 229 KITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
K+ V+CG + + AV+ENG+V++WG G G+LG D P+ + L + +
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR---GGSDGCKTPKLIEKLQDLDVI 661
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
V CG S ALT G +Y+WG +LG G ++ + R +L G
Sbjct: 662 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG------------TEEHVRYPKLLEGLQG 709
Query: 347 VQL--VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
++ VA G +H L D +H WG N Q
Sbjct: 710 KKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 100/219 (45%), Gaps = 46/219 (21%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ QV+C + LS G + YN + P++++G A + +
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNS-----------DMLAPQLVQGLA-----SRNIV 497
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI--- 283
KI S G +H A++ GEVY+WG G G+LGH GD L P+ + A G
Sbjct: 498 KIAAHSDG-HHYLALAATGEVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAG 551
Query: 284 -FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
+ +ACG +S A+T++G LY WG G+LG G + IP+LV
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-------------SSEDEAIPMLV 598
Query: 343 V-PNGVQL--VAC--GHSHTLVYMRDGRIHGWGYNSYGQ 376
G+++ VAC G + TL +G++ WG YG+
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 110/281 (39%), Gaps = 69/281 (24%)
Query: 186 GLLQAWGYNEYGQLGRGI---------TCEGLQGPRVIK--------------------G 216
G + WG+N GQLG GI CE L R ++ G
Sbjct: 3954 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4012
Query: 217 Y----------AKFLDEAPELEKITQ-------VSCGEYHSAAVSENGEVYTWGLGSVGQ 259
Y + + LE I V+ G H A+S GEVY+WG G+
Sbjct: 4013 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4072
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LGH + D+ PR + +L GI + DVA GG HS +T+ G LY WG + G+LG
Sbjct: 4073 LGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG--- 4126
Query: 320 QTRSFSLIPNESDTYFRNIPILVVP---NGVQLVAC--GHSHTLVYMRDGRIHGWGYNSY 374
SD+ + P LV + V +AC G + TL D + WG Y
Sbjct: 4127 ----------HSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDY 4176
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADA 414
G+ S P +D G V K+ G S L +
Sbjct: 4177 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4217
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG + G G + +R P+Q+ + + IA G H DG
Sbjct: 4219 AVYTWGKGDYHRLGH-GSDDHVRRPRQVQ-------GLQGKKVIAIATGSLHCVCCTEDG 4270
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
++TWG N+ GQLGDGT + P V LQ + V ++CG+ T A
Sbjct: 4271 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4317
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 83/224 (37%), Gaps = 39/224 (17%)
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G+ Y + I CEGL V+ QV+C E +S NG VYT
Sbjct: 433 GWKYYANVIGPIQCEGLASLGVM-----------------QVACAEKRFLILSRNGRVYT 475
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWGG 309
S L P+ V L I +A G H AL + G +Y+WG
Sbjct: 476 QAYNS-------------DMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGC 522
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGW 369
G+LG G +P E V +ACG +++ +G ++ W
Sbjct: 523 GDGGRLGHG------DTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTW 576
Query: 370 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLA 412
G +YG+ + S P V G +V +A G G + LA
Sbjct: 577 GRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 620
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 82/218 (37%), Gaps = 62/218 (28%)
Query: 246 NGEVYTWGLGSVGQLG--------------------HCSLQSGDKELL------------ 273
+G +Y WG GQLG L G++ L
Sbjct: 3953 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4012
Query: 274 -----------------PRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWGGSQAGQ 314
P + ++ +FIK VA GG H AL+S+G +Y+WG ++ G+
Sbjct: 4013 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4072
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LG G RS P ++ R I ++ VA G +H+ G ++ WG Y
Sbjct: 4073 LGHG--NRSPCDRPRVIES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRY 4122
Query: 375 GQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
G+ + S P V+ G V +A G G + L
Sbjct: 4123 GRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTL 4160
>gi|351705119|gb|EHB08038.1| RCC1 and BTB domain-containing protein 2 [Heterocephalus glaber]
Length = 527
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 136/303 (44%), Gaps = 49/303 (16%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTAAIAEPRENDGTIS 140
+F G N G LG G + P ++ L + + +S G+ H A E
Sbjct: 43 IFVLGTNCSGCLGLGDVQSTLEPRRLDSLSDKKIACLSYGSGPHIILATTE--------- 93
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVS------------CGSVHVVALSECGLL 188
++ WG N + +L G + CQVS CGS H + L+ G +
Sbjct: 94 -GEVFTWGHN---GYTQLGNGTTNHGLVPCQVSTNLSNKQVIEVACGSYHSLVLTSDGEV 149
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
AWGYN GQ+G G T PR + G + + + ++CG+ S AV + GE
Sbjct: 150 YAWGYNNSGQVGSGSTANQAI-PRRVTG-------CLQNKVVVNIACGQMCSVAVVDTGE 201
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
VY WG GQLG L S + P RV AL GI ++ VACG H+ LT +G +YAWG
Sbjct: 202 VYVWGYNGNGQLG---LGSSGNQPTPCRVAALQGIRVQRVACGFAHTLVLTDEGQVYAWG 258
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRIH 367
+ GQLG G N+S+ + ++ +++ AC +HT + G ++
Sbjct: 259 ANSYGQLGTG----------NKSNQSYPTPVVVEKDRIIEIAACHSTHTSAAKTQGGHVY 308
Query: 368 GWG 370
WG
Sbjct: 309 MWG 311
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 118/245 (48%), Gaps = 23/245 (9%)
Query: 148 GQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEG 207
G Q + PR + + I C H++ + G + WG+N Y QLG G T G
Sbjct: 57 GDVQSTLEPRRL-DSLSDKKIACLSYGSGPHIILATTEGEVFTWGHNGYTQLGNGTTNHG 115
Query: 208 LQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQS 267
L +V + +++ +V+CG YHS ++ +GEVY WG + GQ+G S +
Sbjct: 116 LVPCQVSTNLSN--------KQVIEVACGSYHSLVLTSDGEVYAWGYNNSGQVGSGSTAN 167
Query: 268 GDKELLPRRVV-ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSL 326
+ +PRRV L + ++ACG + S A+ G +Y WG + GQLGLG +
Sbjct: 168 ---QAIPRRVTGCLQNKVVVNIACGQMCSVAVVDTGEVYVWGYNGNGQLGLGSSGNQPTP 224
Query: 327 IPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAW 386
+ R VQ VACG +HTLV +G+++ WG NSYGQ +
Sbjct: 225 CRVAALQGIR----------VQRVACGFAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQS 274
Query: 387 YPSPV 391
YP+PV
Sbjct: 275 YPTPV 279
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 116/243 (47%), Gaps = 39/243 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G +P Q+ L +N + +++ACG H+ + SDG
Sbjct: 96 VFTWGHNGYTQLG-NGTTNHGLVPCQVSTNL------SNKQVIEVACGSYHSLVLTSDGE 148
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
++ WG N GQ+G G+ + P +V LQ++ V +I+CG C+ A+ + T
Sbjct: 149 VYAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSVAV---------VDT 199
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N N P A + +V+CG H + L++ G + AWG
Sbjct: 200 GEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGFAHTLVLTDEGQVYAWGA 259
Query: 194 NEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G + + P V+ E ++I ++ +C H SAA ++ G VY
Sbjct: 260 NSYGQLGTGNKSNQSYPTPVVV-----------EKDRIIEIAACHSTHTSAAKTQGGHVY 308
Query: 251 TWG 253
WG
Sbjct: 309 MWG 311
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 139/334 (41%), Gaps = 46/334 (13%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G V I+V G N SG G + L P + L
Sbjct: 26 VFGNAGNEVLYTTINDEIFVLGTNCSGCLGLGD------VQSTLEPRRLDSLSDKKIACL 79
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAH 124
G H ++G +FTWG N + QLG+GT P +V L ++ V ++CG++
Sbjct: 80 SYGSG-PHIILATTEGEVFTWGHNGYTQLGNGTTNHGLVPCQVSTNLSNKQVIEVACGSY 138
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSN----------FPRLFWGAFTPNTIICQVSC 174
+ + +DG + + WG N PR G N ++ ++C
Sbjct: 139 HSLVLT----SDGEV-----YAWGYNNSGQVGSGSTANQAIPRRVTGCL-QNKVVVNIAC 188
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G + VA+ + G + WGYN GQLG G + RV A + ++ +V+
Sbjct: 189 GQMCSVAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRV---------AALQGIRVQRVA 239
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG 292
CG H+ +++ G+VY WG S GQLG +G+K + P VV I+ AC
Sbjct: 240 CGFAHTLVLTDEGQVYAWGANSYGQLG-----TGNKSNQSYPTPVVVEKDRIIEIAACHS 294
Query: 293 VH-SCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
H S A T G +Y WG + GQ + P FS
Sbjct: 295 THTSAAKTQGGHVYMWGQCR-GQSVILPHLTHFS 327
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 79/175 (45%), Gaps = 21/175 (12%)
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHSCALTSK 301
N E++ G G LG +QS L PRR LD + K +AC G H T++
Sbjct: 40 NDEIFVLGTNCSGCLGLGDVQS---TLEPRR---LDSLSDKKIACLSYGSGPHIILATTE 93
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
G ++ WG + QLG G T + L+P + T N ++ V ACG H+LV
Sbjct: 94 GEVFTWGHNGYTQLGNG--TTNHGLVPCQVSTNLSNKQVIEV-------ACGSYHSLVLT 144
Query: 362 RDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE--VRKLAAGGGHSAVLADA 414
DG ++ WGYN+ GQ + + P V C+ V +A G S + D
Sbjct: 145 SDGEVYAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSVAVVDT 199
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 20/154 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G Q P A R +ACG HT + +G
Sbjct: 202 VYVWGYNGNGQLGLGSSGNQ--------PTPCRVAALQGIRVQRVACGFAHTLVLTDEGQ 253
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
++ WGAN +GQLG G + + +P V + ++ +C H +AA +
Sbjct: 254 VYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSTHTSAAKTQG--------- 304
Query: 142 SRLWVWGQNQGSN--FPRLFWGAFTPNTIICQVS 173
+++WGQ +G + P L + T + C S
Sbjct: 305 GHVYMWGQCRGQSVILPHLTHFSCTDDVFACFAS 338
>gi|148689921|gb|EDL21868.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_a [Mus
musculus]
Length = 4902
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 177/411 (43%), Gaps = 67/411 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
++ ++VWG N Q G L+ K P + N + +A G + AV
Sbjct: 3025 RTKVFVWGLNDKDQLG------GLKGSKIKVPSFSETLSALNV--VQVAGGSKSLFAVTV 3076
Query: 80 DGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPREN 135
+G +++ G G+LG G G P ++ L S VK ++ G H TA
Sbjct: 3077 EGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV----- 3131
Query: 136 DGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
DG +++ WG+ PRL T I ++CGS H AL+
Sbjct: 3132 DG-----KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSS 3184
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGP--RVIKGYAKFLDEAPELEKITQVSCG--EYHSA 241
G L WG EYG+LG G L+ +V+ G+ ++ QV+CG + +
Sbjct: 3185 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-----------RVIQVACGSRDAQTL 3233
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A+++ G V++WG G G+LG + + +P+ + L+G + + CG S ALT
Sbjct: 3234 ALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTKS 3290
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLV 359
G ++ WG +LG G SD + R ++ G ++V A G H L
Sbjct: 3291 GVVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3338
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
G+++ WG N +GQ N +T P+ V G+ + ++A G HS
Sbjct: 3339 VTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3389
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3135 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 3186
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 3187 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 3239
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 3240 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3296
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV+++G+VY
Sbjct: 3297 GKGDYFRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDSGQVYA 3347
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3348 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3393
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 3074 VTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQI-----TALSSYVVKKVAVHSGGRHATA 3128
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+
Sbjct: 3129 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------ 3182
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 3183 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3236
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 3237 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 3287
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH S K P+ V L G I VA G +H A+T G
Sbjct: 3288 TKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDSGQ 3344
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 3345 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3391
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 144/327 (44%), Gaps = 50/327 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +D+A G H+A V + G
Sbjct: 4128 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRGIEV--VDVAAGGAHSACVTAAGD 4179
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG E + P+ V+ LQ V I+CG+ + +D T+
Sbjct: 4180 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLC--LTDDDTV--- 4234
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 4235 --WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4292
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 4293 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4343
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G + VACG H+ AW S+
Sbjct: 4344 NDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAWSTSKPAS 4391
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPIL 341
G P + +P E + + + IPI+
Sbjct: 4392 AGKLP-----AQVPMEYN-HLQEIPII 4412
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 174/411 (42%), Gaps = 76/411 (18%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P C A A R + + G + AV +DG
Sbjct: 4022 IYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALATLRPVQLIGGEQTLFAVTADG 4072
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 4073 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE------- 4125
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG+ + PR+ + V+ G H ++ G L
Sbjct: 4126 ---GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAGDL 4180
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSEN 246
WG YG+LG + + L+ P+++ EA + ++ ++C G+ + ++++
Sbjct: 4181 YTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVIDIACGSGDAQTLCLTDD 4231
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4232 DTVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 4288
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTL 358
WG +LG G SD + R P VQ +A G H +
Sbjct: 4289 WGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCV 4330
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
DG ++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4331 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4381
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 128/276 (46%), Gaps = 25/276 (9%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N P+L G + N + H +AL+ G + +WG + G+LG G
Sbjct: 540 RVYTQAYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG 599
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P+VI ++ + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 600 DTVP-LEEPKVISAFSG----KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 654
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + E +P V L G+ + DVACG + A+T G +++WG G+LG G
Sbjct: 655 ---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 711
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D V V CG ++ +DG+++ WG +
Sbjct: 712 DGCKTPKLIEKLQDL------------DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 759
Query: 379 NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ + YP ++ G +V +AAG H L +
Sbjct: 760 HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 795
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 122/253 (48%), Gaps = 30/253 (11%)
Query: 134 ENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N +GS + + QV+ GS + A++
Sbjct: 3019 ESTATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3077
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + + G G+LG G++ + PR I + ++ K V G H+ A++
Sbjct: 3078 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYV------VKKVAVHSGGRHATALTV 3131
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS ALTS G LY
Sbjct: 3132 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELY 3188
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRD 363
WG + G+LG G T + + +L+ +Q VACG + TL +
Sbjct: 3189 TWGLGEYGRLGHGDNTTQLKP---------KMVKVLLGHRVIQ-VACGSRDAQTLALTDE 3238
Query: 364 GRIHGWGYNSYGQ 376
G + WG +G+
Sbjct: 3239 GLVFSWGDGDFGK 3251
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 134/310 (43%), Gaps = 53/310 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHC 125
+ G +H A++S+G +++WG E G+LG G P ++ L+ E V + GAH
Sbjct: 4112 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4171
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCG 175
A L+ WG+ + P+L A + +I ++CG
Sbjct: 4172 ACVTA----------AGDLYTWGKGRYGRLGHSDSEDQLKPKLV-EALQGHRVI-DIACG 4219
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + L++ + +WG +YG+LGRG +G + P I + +V
Sbjct: 4220 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVKV 4270
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G VYTWG G +LGH S D PR+V L G + +A G +
Sbjct: 4271 ECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSL 4327
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLV 350
H T G +Y WG + GQLG G T P LV V V
Sbjct: 4328 HCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRV 4374
Query: 351 ACGHSHTLVY 360
ACG +HTL +
Sbjct: 4375 ACGSAHTLAW 4384
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 45/285 (15%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+L A N + H A+A+ G +++WG + G+LG G + P+ +
Sbjct: 551 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVI 610
Query: 109 KQLQ----SEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT 164
+ V I+CG+ +AAI E L+ WG+ N+ RL G+
Sbjct: 611 SAFSGKQAGKHVVHIACGSTYSAAITAEGE---------LYTWGRG---NYGRLGHGSSE 658
Query: 165 PNTI-----------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
I + V+CGS +A++E G + +WG +YG+LGRG +G + P
Sbjct: 659 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTP 717
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
++I+ + +V CG S A++++G+VY+WG G +LGH G +E
Sbjct: 718 KLIEKLQDL--------DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH-----GTEE 764
Query: 272 LL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ P+ + L G + DVA G H ALT +++WG + Q
Sbjct: 765 HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 809
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 137/295 (46%), Gaps = 37/295 (12%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG G+ G G L PK + G AG + + IACG ++AA
Sbjct: 579 LAATGEVYSWGCGDGGRLGH-GDTVPLEEPKVIS-AFSGKQAGKHV--VHIACGSTYSAA 634
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E P V L+ V ++CG+ +A
Sbjct: 635 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA------ 688
Query: 137 GTISTSRLWVWGQ----------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
++W WG + G P+L + I +V CGS +AL++ G
Sbjct: 689 -VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVI--KVRCGSQFSIALTKDG 745
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ +WG + +LG G T E ++ P++++G + +K+ V+ G H A++E+
Sbjct: 746 QVYSWGKGDNQRLGHG-TEEHVRYPKLLEGL--------QGKKVIDVAAGSTHCLALTED 796
Query: 247 GEVYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
EV++W GS Q H +L+ E P + LD I +ACG S A +S
Sbjct: 797 SEVHSW--GSNDQCQHFDTLRVTKPE--PTALPGLDSKHIVGIACGPAQSFAWSS 847
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 97/212 (45%), Gaps = 28/212 (13%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ ++CGS + A++ G L WG YG+LG G + E P ++ G
Sbjct: 622 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-SSEDEAIPMLVAGLKGL-------- 672
Query: 229 KITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
K+ V+CG + + AV+ENG+V++WG G G+LG D P+ + L + +
Sbjct: 673 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR---GGSDGCKTPKLIEKLQDLDVI 729
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
V CG S ALT G +Y+WG +LG G ++ + R +L G
Sbjct: 730 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG------------TEEHVRYPKLLEGLQG 777
Query: 347 VQL--VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
++ VA G +H L D +H WG N Q
Sbjct: 778 KKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 809
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 100/219 (45%), Gaps = 46/219 (21%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ QV+C + LS G + YN + P++++G A + +
Sbjct: 522 VMQVACAEKRFLILSRNGRVYTQAYNS-----------DMLAPQLVQGLA-----SRNIV 565
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI--- 283
KI S G +H A++ GEVY+WG G G+LGH GD L P+ + A G
Sbjct: 566 KIAAHSDG-HHYLALAATGEVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAG 619
Query: 284 -FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
+ +ACG +S A+T++G LY WG G+LG G + IP+LV
Sbjct: 620 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-------------SSEDEAIPMLV 666
Query: 343 V-PNGVQL--VAC--GHSHTLVYMRDGRIHGWGYNSYGQ 376
G+++ VAC G + TL +G++ WG YG+
Sbjct: 667 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 705
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 110/281 (39%), Gaps = 69/281 (24%)
Query: 186 GLLQAWGYNEYGQLGRGI---------TCEGLQGPRVIK--------------------G 216
G + WG+N GQLG GI CE L R ++ G
Sbjct: 4020 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4078
Query: 217 Y----------AKFLDEAPELEKITQ-------VSCGEYHSAAVSENGEVYTWGLGSVGQ 259
Y + + LE I V+ G H A+S GEVY+WG G+
Sbjct: 4079 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4138
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LGH + D+ PR + +L GI + DVA GG HS +T+ G LY WG + G+LG
Sbjct: 4139 LGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG--- 4192
Query: 320 QTRSFSLIPNESDTYFRNIPILVVP---NGVQLVAC--GHSHTLVYMRDGRIHGWGYNSY 374
SD+ + P LV + V +AC G + TL D + WG Y
Sbjct: 4193 ----------HSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDY 4242
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADA 414
G+ S P +D G V K+ G S L +
Sbjct: 4243 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4283
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG + G G + +R P+Q+ + + IA G H DG
Sbjct: 4285 AVYTWGKGDYHRLGH-GSDDHVRRPRQVQ-------GLQGKKVIAIATGSLHCVCCTEDG 4336
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
++TWG N+ GQLGDGT + P V LQ + V ++CG+ T A
Sbjct: 4337 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4383
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 83/224 (37%), Gaps = 39/224 (17%)
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G+ Y + I CEGL V+ QV+C E +S NG VYT
Sbjct: 501 GWKYYANVIGPIQCEGLASLGVM-----------------QVACAEKRFLILSRNGRVYT 543
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWGG 309
S L P+ V L I +A G H AL + G +Y+WG
Sbjct: 544 QAYNS-------------DMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGC 590
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGW 369
G+LG G +P E V +ACG +++ +G ++ W
Sbjct: 591 GDGGRLGHG------DTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTW 644
Query: 370 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLA 412
G +YG+ + S P V G +V +A G G + LA
Sbjct: 645 GRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 688
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 82/218 (37%), Gaps = 62/218 (28%)
Query: 246 NGEVYTWGLGSVGQLG--------------------HCSLQSGDKELL------------ 273
+G +Y WG GQLG L G++ L
Sbjct: 4019 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4078
Query: 274 -----------------PRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWGGSQAGQ 314
P + ++ +FIK VA GG H AL+S+G +Y+WG ++ G+
Sbjct: 4079 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4138
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LG G RS P ++ R I ++ VA G +H+ G ++ WG Y
Sbjct: 4139 LGHG--NRSPCDRPRVIES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRY 4188
Query: 375 GQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
G+ + S P V+ G V +A G G + L
Sbjct: 4189 GRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTL 4226
>gi|297603670|ref|NP_001054420.2| Os05g0106700 [Oryza sativa Japonica Group]
gi|255675937|dbj|BAF16334.2| Os05g0106700 [Oryza sativa Japonica Group]
Length = 685
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 116/419 (27%), Positives = 173/419 (41%), Gaps = 51/419 (12%)
Query: 15 DNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL----DIACG 70
D+ + +YVWG + R G + +R ++ F P SR + + CG
Sbjct: 29 DDCDSLGDVYVWGEVFCENSVRVGSDTIIRSTEKTD---FLLPKPLESRLVLDVYHVDCG 85
Query: 71 HEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIA 130
H A V +G +FTWG + G+LG GT E HP V+ L + V ++CG T A+
Sbjct: 86 VRHAALVTRNGDVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVACGEFHTCAVT 145
Query: 131 EPRE----NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
E DGT + L G + G P+ GA + VSCG+ H ++ G
Sbjct: 146 TTGELYTWGDGTHNVGLLG-HGTDAGHWIPKRISGAL-DGLPVAYVSCGTWHTALITSMG 203
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE- 245
L +G +G LG G + P+ ++ + K V+CG +H+AA+ E
Sbjct: 204 QLFTFGDGSFGVLGHG-NLTSISCPKEVESLSGL--------KTIAVACGVWHTAAIVEV 254
Query: 246 ----------NGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGV 293
G+++TWG G +LGH GDKE L P V +L VACG
Sbjct: 255 IVTHSSSSVSAGKLFTWGDGDKHRLGH-----GDKESRLKPTCVASLIDYDFYRVACGHS 309
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG 353
+ LT+ G + + G S GQLG PN + + V VACG
Sbjct: 310 LTVCLTTSGKVLSMGNSVYGQLG----------NPNSDGRLPCLVEDRIAGEHVLQVACG 359
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 411
H V + WG + G+ + P+ V+ VR +A G +A +
Sbjct: 360 SYHVAVLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACGANFTAAI 418
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 141/337 (41%), Gaps = 72/337 (21%)
Query: 23 IYVWG--YNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
+Y WG ++ G G G + IPK++ L G P ++CG HTA + S
Sbjct: 150 LYTWGDGTHNVGLLGH-GTDAGHWIPKRISGALDGLPVAY------VSCGTWHTALITSM 202
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP--RENDGT 138
G LFT+G FG LG G P++V+ L +++CG TAAI E + +
Sbjct: 203 GQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSS 262
Query: 139 ISTSRLWVWGQN------QGSNFPRL--FWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
+S +L+ WG G RL A + +V+CG V L+ G + +
Sbjct: 263 VSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLTTSGKVLS 322
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
G + YGQLG P +++ E + QV+CG YH A ++ EV+
Sbjct: 323 MGNSVYGQLG---------NPNSDGRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEVF 373
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG------------------ 292
TWG G+ G+LGH ++ D+++ P +V AL ++ +ACG
Sbjct: 374 TWGKGANGRLGHGDIE--DRKV-PTQVEALKDRAVRHIACGANFTAAICLHKWVSGADQS 430
Query: 293 -----------------------VHSCALTSKGALYA 306
VH A TS+ AL A
Sbjct: 431 QCSSCQQPFGFTRKRHNCYNCGLVHCNACTSRKALRA 467
>gi|15237253|ref|NP_197108.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|9755650|emb|CAC01803.1| UVB-resistance protein-like [Arabidopsis thaliana]
gi|114213505|gb|ABI54335.1| At5g16040 [Arabidopsis thaliana]
gi|332004857|gb|AED92240.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 396
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 150/369 (40%), Gaps = 71/369 (19%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N G G + P + + AN + + A G H AV G
Sbjct: 59 LFTWGWNQRGTLGHPPETKTESTPSLVK-------SLANVKIVQAAIGGWHCLAVDDQGR 111
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ WG NE+GQ G EE K E + ++ + V C T + T
Sbjct: 112 AYAWGGNEYGQCG---EEPSKD-ETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTR 167
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSC---------------GSVHVVALSECGL 187
+VW WG P I Q+S G+ H +AL E G
Sbjct: 168 EGYVW-----------TWGQPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALKEDGT 216
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
L AWG NEYGQLG G T PR + LD+ + ++ G +HS A++ G
Sbjct: 217 LWAWGNNEYGQLGTGDTQ-----PRSYPIPVQGLDDL----TLVDIAAGGWHSTALTNEG 267
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
EVY WG G G+LG K +LP++V L G I V+CGG HS ALT G ++++
Sbjct: 268 EVYGWGRGEHGRLGFGDNDKSSK-MLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSF 326
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL---------------VAC 352
G G+LG G + + + +PI + P + VAC
Sbjct: 327 GRGDHGRLGYGRKVTTGQPL---------ELPIHIPPPEGRFNHTDEEDDGKWIAKHVAC 377
Query: 353 GHSHTLVYM 361
G HTL +
Sbjct: 378 GGRHTLAIV 386
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 149/351 (42%), Gaps = 69/351 (19%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+AS ++ WG+ E GQLG GT+E ++ V L+ V+S+ G+ + AI +D
Sbjct: 1 MASATSVIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAIC----DD 56
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTP-------NTIICQVSCGSVHVVALSECGLLQ 189
G + T W W Q P TP N I Q + G H +A+ + G
Sbjct: 57 GKLFT---WGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAY 113
Query: 190 AWGYNEYGQLG----------------------------RGITCEGLQGPRVIK-GYAKF 220
AWG NEYGQ G R + G + + GY
Sbjct: 114 AWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWT 173
Query: 221 LDEAPELEKITQVS---------------CGEYHSAAVSENGEVYTWGLGSVGQLGHCSL 265
+ I Q+S G +H+ A+ E+G ++ WG GQLG
Sbjct: 174 WGQPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDT 233
Query: 266 QSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
Q P V LD + + D+A GG HS ALT++G +Y WG + G+LG G +S
Sbjct: 234 QP---RSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSK 290
Query: 326 LIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
++P + + L+ + V+CG +H++ RDGRI +G +G+
Sbjct: 291 MLPQKVN--------LLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGR 333
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 102/251 (40%), Gaps = 31/251 (12%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ V GS + +A+ + G L WG+N+ G LG + P ++K A
Sbjct: 40 VRSVVGGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANV-------- 91
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA----LDGIF 284
KI Q + G +H AV + G Y WG GQ G + + R +V +
Sbjct: 92 KIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLT 151
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP 344
++ VA GG HS LT +G ++ WG D ++P+ V
Sbjct: 152 VRQVAAGGTHSVVLTREGYVWTWGQPWP-----------------PGDIKQISVPVRVQG 194
Query: 345 -NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLA 402
V+L+A G H L DG + WG N YGQ + YP PV + +A
Sbjct: 195 LENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIA 254
Query: 403 AGGGHSAVLAD 413
AGG HS L +
Sbjct: 255 AGGWHSTALTN 265
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 113/242 (46%), Gaps = 44/242 (18%)
Query: 24 YVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTL 83
YVW + GQ G +Q+ +P ++ G + L IA G H A+ DGTL
Sbjct: 170 YVWTW---GQPWPPGDIKQISVPVRV--------QGLENVRL-IAVGAFHNLALKEDGTL 217
Query: 84 FTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSR 143
+ WG NE+GQLG G + R +P V+ L + I+ G + A+ N+G +
Sbjct: 218 WAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALT----NEGEV---- 269
Query: 144 LWVWGQNQGSNFPRLFWG------AFTPNTI-------ICQVSCGSVHVVALSECGLLQA 190
+ WG+ + RL +G P + I QVSCG H VAL+ G + +
Sbjct: 270 -YGWGRGE---HGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFS 325
Query: 191 WGYNEYGQLGRG---ITCEGLQGPRVI---KGYAKFLDEAPELEKITQ-VSCGEYHSAAV 243
+G ++G+LG G T + L+ P I +G DE + + I + V+CG H+ A+
Sbjct: 326 FGRGDHGRLGYGRKVTTGQPLELPIHIPPPEGRFNHTDEEDDGKWIAKHVACGGRHTLAI 385
Query: 244 SE 245
E
Sbjct: 386 VE 387
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 80/172 (46%), Gaps = 20/172 (11%)
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
V WG G GQLG L + +++ L V AL+ ++ V G +S A+ G L+ WG
Sbjct: 7 VIAWGSGEDGQLG---LGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWG 63
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHG 368
+Q G LG P+T++ S P+ + N+ I+ A G H L GR +
Sbjct: 64 WNQRGTLGHPPETKTES-TPSLVKS-LANVKIV-------QAAIGGWHCLAVDDQGRAYA 114
Query: 369 WGYNSYGQAANEKST-YAWYPSPVDWCVGE-------VRKLAAGGGHSAVLA 412
WG N YGQ E S P D + + VR++AAGG HS VL
Sbjct: 115 WGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLT 166
>gi|296134345|ref|YP_003641592.1| Ig domain-containing protein group 2 domain-containing protein
[Thermincola potens JR]
gi|296032923|gb|ADG83691.1| Ig domain protein group 2 domain protein [Thermincola potens JR]
Length = 4140
Score = 117 bits (293), Expect = 1e-23, Method: Composition-based stats.
Identities = 86/263 (32%), Positives = 131/263 (49%), Gaps = 34/263 (12%)
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLGDGTEE--GRKHPEKVKQLQSEFVKSISCGAHCTA 127
G ++ A+ DGT++ WG N+ GQLG+G ++ K+PE+V L V +++ G +
Sbjct: 2451 GTGYSLALKPDGTVWAWGINDQGQLGNGGQDLNPHKNPEQVPGLTG--VTALAPGGYHVV 2508
Query: 128 AIAEPRENDGTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVA 181
A+ +NDGT+ W WG+N G+ R G T + V+ G+ H V
Sbjct: 2509 AL----KNDGTV-----WTWGKNDSGQLGDGTYTSRFSPGQVPGLTGVKAVAAGANHTVV 2559
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVI-KGYAKFLDEAPELEKITQVSCGEYHS 240
L G + AWG N YGQLG P V+ K Y+ + P ++ + ++ G +H+
Sbjct: 2560 LKTDGTVWAWGNNMYGQLG--------TSPSVLAKTYSPV--QIPGIDSVVEIGAGIWHT 2609
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
A +G V+ WG GQ+G+ S + P +V L G+ VA GG H+ AL S
Sbjct: 2610 LARRADGTVWAWGRNIEGQVGNGSASAVVDS--PAQVSGLTGV--TKVAAGGYHNLALRS 2665
Query: 301 KGALYAWGGSQAGQLGLGPQTRS 323
G ++AWG + GQLG G S
Sbjct: 2666 DGTVWAWGRNDKGQLGTGNTVSS 2688
Score = 114 bits (285), Expect = 1e-22, Method: Composition-based stats.
Identities = 78/247 (31%), Positives = 115/247 (46%), Gaps = 37/247 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G G++ + P L G A +A G H A+ +DGT
Sbjct: 2464 VWAWGINDQGQLGNGGQDLNPHKNPEQVPGLTGVTA--------LAPGGYHVVALKNDGT 2515
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++TWG N+ GQLGDGT R P +V L VK+++ GA+ T + + DGT+
Sbjct: 2516 VWTWGKNDSGQLGDGTYTSRFSPGQVPGLTG--VKAVAAGANHTVVL----KTDGTV--- 2566
Query: 143 RLWVWGQN---QGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG N Q P + ++P I + ++ G H +A G + AWG N
Sbjct: 2567 --WAWGNNMYGQLGTSPSVLAKTYSPVQIPGIDSVVEIGAGIWHTLARRADGTVWAWGRN 2624
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
GQ+G G + P + G L +T+V+ G YH+ A+ +G V+ WG
Sbjct: 2625 IEGQVGNGSASAVVDSPAQVSG----------LTGVTKVAAGGYHNLALRSDGTVWAWGR 2674
Query: 255 GSVGQLG 261
GQLG
Sbjct: 2675 NDKGQLG 2681
Score = 102 bits (254), Expect = 4e-19, Method: Composition-based stats.
Identities = 84/251 (33%), Positives = 116/251 (46%), Gaps = 26/251 (10%)
Query: 162 AFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFL 221
A TP V G+ + +AL G + AWG N+ GQLG G + L P K
Sbjct: 2438 ANTPAFTAAAVYSGTGYSLALKPDGTVWAWGINDQGQLGNG--GQDLN-PH------KNP 2488
Query: 222 DEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD 281
++ P L +T ++ G YH A+ +G V+TWG GQLG + S P +V L
Sbjct: 2489 EQVPGLTGVTALAPGGYHVVALKNDGTVWTWGKNDSGQLGDGTYTS---RFSPGQVPGLT 2545
Query: 282 GIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL 341
G +K VA G H+ L + G ++AWG + GQLG P + + P + IP +
Sbjct: 2546 G--VKAVAAGANHTVVLKTDGTVWAWGNNMYGQLGTSPSVLAKTYSPVQ-------IPGI 2596
Query: 342 VVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAAN-EKSTYAWYPSPVDWCVGEVRK 400
+ V + G HTL DG + WG N GQ N S P+ V G V K
Sbjct: 2597 ---DSVVEIGAGIWHTLARRADGTVWAWGRNIEGQVGNGSASAVVDSPAQVSGLTG-VTK 2652
Query: 401 LAAGGGHSAVL 411
+AAGG H+ L
Sbjct: 2653 VAAGGYHNLAL 2663
Score = 49.7 bits (117), Expect = 0.004, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 165 PNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
P ++ G+ H +A+ L WG N+ GQLG G E + P +++ D
Sbjct: 1946 PPPPFTDIAAGTDHSMAVRGDSALVGWGANDDGQLGDGHFGEPVPYPVLVRN----ADGT 2001
Query: 225 PELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCS 264
P ++ +S G H+A + +G V++WG + GQLG+ S
Sbjct: 2002 PWNPVLSGMSPGSTHTAVLGSDGSVWSWGNNAFGQLGNGS 2041
Score = 47.0 bits (110), Expect = 0.024, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 46/105 (43%), Gaps = 11/105 (10%)
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLG---LGPQTRSFSLIPNESDTYFRNIPILVV 343
D+A G HS A+ AL WG + GQLG G L+ N T + P+L
Sbjct: 1952 DIAAGTDHSMAVRGDSALVGWGANDDGQLGDGHFGEPVPYPVLVRNADGTPWN--PVL-- 2007
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYP 388
++ G +HT V DG + WG N++GQ N A P
Sbjct: 2008 ----SGMSPGSTHTAVLGSDGSVWSWGNNAFGQLGNGSYATAGPP 2048
Score = 46.6 bits (109), Expect = 0.029, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 14/90 (15%)
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGT-EEGRKHPEKVKQLQ----SEFVKSIS 120
DIA G +H+ AV D L WGAN+ GQLGDG E +P V+ + + +S
Sbjct: 1952 DIAAGTDHSMAVRGDSALVGWGANDDGQLGDGHFGEPVPYPVLVRNADGTPWNPVLSGMS 2011
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQN 150
G+ TA + +DG++ W WG N
Sbjct: 2012 PGSTHTAVLG----SDGSV-----WSWGNN 2032
Score = 45.4 bits (106), Expect = 0.060, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
SA+ WG N GQ G + P L G P N ++ G HTA + SD
Sbjct: 1967 SALVGWGANDDGQLGDGHFGEPVPYP-VLVRNADGTPW--NPVLSGMSPGSTHTAVLGSD 2023
Query: 81 GTLFTWGANEFGQLGDGT 98
G++++WG N FGQLG+G+
Sbjct: 2024 GSVWSWGNNAFGQLGNGS 2041
Score = 44.7 bits (104), Expect = 0.099, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 48/124 (38%), Gaps = 19/124 (15%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A ++ WG N GQ G + P Q+ L G +A G H A+
Sbjct: 2614 ADGTVWAWGRNIEGQVGNGSASAVVDSPAQVS-GLTGVT--------KVAAGGYHNLALR 2664
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQ----------SEFVKSISCGAHCTAA 128
SDGT++ WG N+ GQLG G P + + Q +E ++ H T
Sbjct: 2665 SDGTVWAWGRNDKGQLGTGNTVSSNVPVQTRYDQAGPAVVGVSPAEGAVDVARNTHITVT 2724
Query: 129 IAEP 132
EP
Sbjct: 2725 FDEP 2728
Score = 44.3 bits (103), Expect = 0.13, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 6/92 (6%)
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI----FIK 286
T ++ G HS AV + + WG GQLG G+ P V DG +
Sbjct: 1951 TDIAAGTDHSMAVRGDSALVGWGANDDGQLGDGHF--GEPVPYPVLVRNADGTPWNPVLS 2008
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLG 318
++ G H+ L S G++++WG + GQLG G
Sbjct: 2009 GMSPGSTHTAVLGSDGSVWSWGNNAFGQLGNG 2040
>gi|134288898|ref|NP_034548.2| E3 ubiquitin-protein ligase HERC2 [Mus musculus]
gi|341941077|sp|Q4U2R1.3|HERC2_MOUSE RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
domain and RCC1-like domain-containing protein 2
Length = 4836
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 179/412 (43%), Gaps = 69/412 (16%)
Query: 20 KSAIYVWGYNHSGQTG-RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
++ ++VWG N Q G KG + ++ P + N + +A G + AV
Sbjct: 2959 RTKVFVWGLNDKDQLGGLKGSKIKV-------PSFSETLSALNV--VQVAGGSKSLFAVT 3009
Query: 79 SDGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRE 134
+G +++ G G+LG G G P ++ L S VK ++ G H TA
Sbjct: 3010 VEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV---- 3065
Query: 135 NDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSE 184
DG +++ WG+ PRL T I ++CGS H AL+
Sbjct: 3066 -DG-----KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTS 3117
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGP--RVIKGYAKFLDEAPELEKITQVSCG--EYHS 240
G L WG EYG+LG G L+ +V+ G+ ++ QV+CG + +
Sbjct: 3118 SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-----------RVIQVACGSRDAQT 3166
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
A+++ G V++WG G G+LG + + +P+ + L+G + + CG S ALT
Sbjct: 3167 LALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTK 3223
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTL 358
G ++ WG +LG G SD + R ++ G ++V A G H L
Sbjct: 3224 SGVVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRGKKIVHVAVGALHCL 3271
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
G+++ WG N +GQ N +T P+ V G+ + ++A G HS
Sbjct: 3272 AVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3323
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3069 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 3120
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 3121 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 3173
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 3174 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3230
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV+++G+VY
Sbjct: 3231 GKGDYFRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDSGQVYA 3281
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3282 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3327
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 3008 VTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQI-----TALSSYVVKKVAVHSGGRHATA 3062
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+
Sbjct: 3063 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------ 3116
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 3117 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3170
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 3171 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 3221
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH S K P+ V L G I VA G +H A+T G
Sbjct: 3222 TKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDSGQ 3278
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 3279 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3325
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 144/327 (44%), Gaps = 50/327 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +D+A G H+A V + G
Sbjct: 4062 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRGIEV--VDVAAGGAHSACVTAAGD 4113
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG E + P+ V+ LQ V I+CG+ + +D T+
Sbjct: 4114 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLC--LTDDDTV--- 4168
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 4169 --WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4226
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 4227 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4277
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G + VACG H+ AW S+
Sbjct: 4278 NDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAWSTSKPAS 4325
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPIL 341
G P + +P E + + + IPI+
Sbjct: 4326 AGKLP-----AQVPMEYN-HLQEIPII 4346
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 174/411 (42%), Gaps = 76/411 (18%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P C A A R + + G + AV +DG
Sbjct: 3956 IYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALATLRPVQLIGGEQTLFAVTADG 4006
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 4007 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE------- 4059
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG+ + PR+ + V+ G H ++ G L
Sbjct: 4060 ---GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAGDL 4114
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSEN 246
WG YG+LG + + L+ P+++ EA + ++ ++C G+ + ++++
Sbjct: 4115 YTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVIDIACGSGDAQTLCLTDD 4165
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4166 DTVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 4222
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTL 358
WG +LG G SD + R P VQ +A G H +
Sbjct: 4223 WGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCV 4264
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
DG ++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4265 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4315
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 128/276 (46%), Gaps = 25/276 (9%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N P+L G + N + H +AL+ G + +WG + G+LG G
Sbjct: 472 RVYTQAYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG 531
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P+VI ++ + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 532 DTVP-LEEPKVISAFSG----KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 586
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + E +P V L G+ + DVACG + A+T G +++WG G+LG G
Sbjct: 587 ---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 643
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D V V CG ++ +DG+++ WG +
Sbjct: 644 DGCKTPKLIEKLQDL------------DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 691
Query: 379 NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ + YP ++ G +V +AAG H L +
Sbjct: 692 HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 124/253 (49%), Gaps = 30/253 (11%)
Query: 134 ENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N +GS + + QV+ GS + A++
Sbjct: 2953 ESTATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + + G G+LG G++ + PR I + ++ K V G H+ A++
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYV------VKKVAVHSGGRHATALTV 3065
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS ALTS G LY
Sbjct: 3066 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELY 3122
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRD 363
WG + G+LG G T L P + + +L+ +Q VACG + TL +
Sbjct: 3123 TWGLGEYGRLGHGDNTT--QLKP-------KMVKVLLGHRVIQ-VACGSRDAQTLALTDE 3172
Query: 364 GRIHGWGYNSYGQ 376
G + WG +G+
Sbjct: 3173 GLVFSWGDGDFGK 3185
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 134/310 (43%), Gaps = 53/310 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHC 125
+ G +H A++S+G +++WG E G+LG G P ++ L+ E V + GAH
Sbjct: 4046 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4105
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCG 175
A L+ WG+ + P+L A + +I ++CG
Sbjct: 4106 ACVTA----------AGDLYTWGKGRYGRLGHSDSEDQLKPKLV-EALQGHRVI-DIACG 4153
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + L++ + +WG +YG+LGRG +G + P I + +V
Sbjct: 4154 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVKV 4204
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G VYTWG G +LGH S D PR+V L G + +A G +
Sbjct: 4205 ECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSL 4261
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLV 350
H T G +Y WG + GQLG G T P LV V V
Sbjct: 4262 HCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRV 4308
Query: 351 ACGHSHTLVY 360
ACG +HTL +
Sbjct: 4309 ACGSAHTLAW 4318
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 45/285 (15%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+L A N + H A+A+ G +++WG + G+LG G + P+ +
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVI 542
Query: 109 KQLQ----SEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT 164
+ V I+CG+ +AAI E L+ WG+ N+ RL G+
Sbjct: 543 SAFSGKQAGKHVVHIACGSTYSAAITAEGE---------LYTWGRG---NYGRLGHGSSE 590
Query: 165 PNTI-----------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
I + V+CGS +A++E G + +WG +YG+LGRG +G + P
Sbjct: 591 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTP 649
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
++I+ + +V CG S A++++G+VY+WG G +LGH G +E
Sbjct: 650 KLIEKLQDL--------DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH-----GTEE 696
Query: 272 LL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ P+ + L G + DVA G H ALT +++WG + Q
Sbjct: 697 HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 137/295 (46%), Gaps = 37/295 (12%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG G+ G G L PK + G AG + + IACG ++AA
Sbjct: 511 LAATGEVYSWGCGDGGRLGH-GDTVPLEEPKVIS-AFSGKQAGKHV--VHIACGSTYSAA 566
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E P V L+ V ++CG+ +A
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA------ 620
Query: 137 GTISTSRLWVWGQ----------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
++W WG + G P+L + I +V CGS +AL++ G
Sbjct: 621 -VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVI--KVRCGSQFSIALTKDG 677
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ +WG + +LG G T E ++ P++++G + +K+ V+ G H A++E+
Sbjct: 678 QVYSWGKGDNQRLGHG-TEEHVRYPKLLEGL--------QGKKVIDVAAGSTHCLALTED 728
Query: 247 GEVYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
EV++W GS Q H +L+ E P + LD I +ACG S A +S
Sbjct: 729 SEVHSW--GSNDQCQHFDTLRVTKPE--PTALPGLDSKHIVGIACGPAQSFAWSS 779
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 97/212 (45%), Gaps = 28/212 (13%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ ++CGS + A++ G L WG YG+LG G + E P ++ G
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-SSEDEAIPMLVAGLKGL-------- 604
Query: 229 KITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
K+ V+CG + + AV+ENG+V++WG G G+LG D P+ + L + +
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR---GGSDGCKTPKLIEKLQDLDVI 661
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
V CG S ALT G +Y+WG +LG G ++ + R +L G
Sbjct: 662 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG------------TEEHVRYPKLLEGLQG 709
Query: 347 VQL--VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
++ VA G +H L D +H WG N Q
Sbjct: 710 KKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 100/219 (45%), Gaps = 46/219 (21%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ QV+C + LS G + YN + P++++G A + +
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNS-----------DMLAPQLVQGLA-----SRNIV 497
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI--- 283
KI S G +H A++ GEVY+WG G G+LGH GD L P+ + A G
Sbjct: 498 KIAAHSDG-HHYLALAATGEVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAG 551
Query: 284 -FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
+ +ACG +S A+T++G LY WG G+LG G + IP+LV
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-------------SSEDEAIPMLV 598
Query: 343 V-PNGVQL--VAC--GHSHTLVYMRDGRIHGWGYNSYGQ 376
G+++ VAC G + TL +G++ WG YG+
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 110/281 (39%), Gaps = 69/281 (24%)
Query: 186 GLLQAWGYNEYGQLGRGI---------TCEGLQGPRVIK--------------------G 216
G + WG+N GQLG GI CE L R ++ G
Sbjct: 3954 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4012
Query: 217 Y----------AKFLDEAPELEKITQ-------VSCGEYHSAAVSENGEVYTWGLGSVGQ 259
Y + + LE I V+ G H A+S GEVY+WG G+
Sbjct: 4013 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4072
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LGH + D+ PR + +L GI + DVA GG HS +T+ G LY WG + G+LG
Sbjct: 4073 LGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG--- 4126
Query: 320 QTRSFSLIPNESDTYFRNIPILVVP---NGVQLVAC--GHSHTLVYMRDGRIHGWGYNSY 374
SD+ + P LV + V +AC G + TL D + WG Y
Sbjct: 4127 ----------HSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDY 4176
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADA 414
G+ S P +D G V K+ G S L +
Sbjct: 4177 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4217
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG + G G + +R P+Q+ + + IA G H DG
Sbjct: 4219 AVYTWGKGDYHRLGH-GSDDHVRRPRQVQ-------GLQGKKVIAIATGSLHCVCCTEDG 4270
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
++TWG N+ GQLGDGT + P V LQ + V ++CG+ T A
Sbjct: 4271 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4317
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 83/224 (37%), Gaps = 39/224 (17%)
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G+ Y + I CEGL V+ QV+C E +S NG VYT
Sbjct: 433 GWKYYANVIGPIQCEGLASLGVM-----------------QVACAEKRFLILSRNGRVYT 475
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWGG 309
S L P+ V L I +A G H AL + G +Y+WG
Sbjct: 476 QAYNS-------------DMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGC 522
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGW 369
G+LG G +P E V +ACG +++ +G ++ W
Sbjct: 523 GDGGRLGHG------DTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTW 576
Query: 370 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLA 412
G +YG+ + S P V G +V +A G G + LA
Sbjct: 577 GRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 620
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 82/218 (37%), Gaps = 62/218 (28%)
Query: 246 NGEVYTWGLGSVGQLG--------------------HCSLQSGDKELL------------ 273
+G +Y WG GQLG L G++ L
Sbjct: 3953 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4012
Query: 274 -----------------PRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWGGSQAGQ 314
P + ++ +FIK VA GG H AL+S+G +Y+WG ++ G+
Sbjct: 4013 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4072
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LG G RS P ++ R I ++ VA G +H+ G ++ WG Y
Sbjct: 4073 LGHG--NRSPCDRPRVIES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRY 4122
Query: 375 GQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
G+ + S P V+ G V +A G G + L
Sbjct: 4123 GRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTL 4160
>gi|395502621|ref|XP_003755677.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sarcophilus
harrisii]
Length = 4865
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 195/430 (45%), Gaps = 70/430 (16%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
MD + T+RP D ++ K +Y+WG GQ GR + IP P
Sbjct: 3980 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMIPAAAP--------- 4028
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
+ S+ + CG T + ++GT+ G +G+LG G + + LQ V +
Sbjct: 4029 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQL 4088
Query: 120 --SCGAH-CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI---- 168
SCG+ + A+ E E ++ WG ++ +L G P I
Sbjct: 4089 VTSCGSDGHSMALTESGE---------VFSWGDG---DYGKLGHGNSDRQRRPRQIEALQ 4136
Query: 169 ---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV--IKGYAKFLDE 223
+ Q+SCG H ++ G L +G +YG+LG G T RV ++GY
Sbjct: 4137 GEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY------ 4190
Query: 224 APELEKITQVSCGEYHSAAVSENGE-VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG 282
+I QV+CG H+ AVS +G V+ +G G G+LG L + + P++V L G
Sbjct: 4191 -----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCG 4242
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL- 341
I IK VACG S ALT G +Y +G Q +GL P+ R+ + + IP+L
Sbjct: 4243 IGIKKVACGTQFSVALTKDGHVYTFG--QDRLIGL-PEGRA------RNHNRPQQIPVLA 4293
Query: 342 -VVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VR 399
VV ++ VA G HTL G ++ WG NS GQ + + P+ + G+ +R
Sbjct: 4294 GVV---IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIR 4350
Query: 400 KLAAGGGHSA 409
+++AG HSA
Sbjct: 4351 QISAGRCHSA 4360
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 180/405 (44%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ P+L P+ ++++ I G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQ------PKL--APSFSDAQ--TIEAGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA----HCTAAIAEPRENDGT 138
+ G +G+LG G + +K+ +K +S H A E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE------- 476
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG + +P+L G ++C VS G H A+SE G L
Sbjct: 477 ---GEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVSEDGEL 532
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G P ++K ++ + +VSCG H+ A+S++G
Sbjct: 533 YTWGEGDFGRLGHG-DSNSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 581
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ + AL G+FI+ V G S ALTS G +Y
Sbjct: 582 TVWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVY 636
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V ++ G SH L D
Sbjct: 637 AWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-ISIGDSHCLALSHDNE 685
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHS 730
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 143/307 (46%), Gaps = 43/307 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V SDG
Sbjct: 4107 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVIQMSCGFKHSAVVTSDGK 4158
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG++
Sbjct: 4159 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA----DGSM--- 4211
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNT------IIC-----QVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T + ++C +V+CG+ VAL++ G + +
Sbjct: 4212 -VWAFGDG---DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4267
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ I A + I V+ G H+ A++ G+VY
Sbjct: 4268 GQDRLIGLPEG-RARNHNRPQQIPVLAGVV--------IEDVAVGAEHTLALASTGDVYA 4318
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYAWGGS 310
WG S GQLG L + P + L G I+ ++ G HS A T S A G S
Sbjct: 4319 WGSNSEGQLG---LGHTNHVREPTLITVLQGKNIRQISAGRCHSAAWTASPVPPRAPGVS 4375
Query: 311 QAGQLGL 317
QLGL
Sbjct: 4376 VPLQLGL 4382
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 135/289 (46%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV+ DG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVSEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P I I +V GS +AL+ G + AW
Sbjct: 583 -VWSFG---GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I +S G+ H A+S + EVY
Sbjct: 639 GCG--ACLGCGSSEATALRPKLIEELAA--------TRIVDISIGDSHCLALSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDG+ I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGVAIQQISAGTSHSLAWTA 735
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 99/228 (43%), Gaps = 30/228 (13%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +GQL G V+ A AP + QV CG+ + + NG V
Sbjct: 4006 WGAGRHGQLAEA-------GRNVMIPAA-----APSFSQAQQVICGQNCTFVIQANGTVL 4053
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGALYAW 307
G GS G+LG + S D +L + AL G + + +CG HS ALT G +++W
Sbjct: 4054 ACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSW 4110
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G R R I L +Q+ +CG H+ V DG++
Sbjct: 4111 GDGDYGKLGHGNSDR---------QRRPRQIEALQGEEVIQM-SCGFKHSAVVTSDGKLF 4160
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
+G YG+ ++ P V G ++ ++A G H+ AV AD
Sbjct: 4161 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 4208
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 14/173 (8%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VSE EVY WG S QL G +E + + +A + + G + +++ G
Sbjct: 368 VSETCEVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ A G G+LGLG +L + + R+I + G HTL +
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RSIKKVSSSKG------SDGHTLAFTT 475
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+G + WG YG+ + S+ YP + + G+V ++AG HSA +++
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSE 528
>gi|194040610|ref|XP_001928937.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Sus
scrofa]
Length = 568
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 134/300 (44%), Gaps = 43/300 (14%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTAAIAEPRENDGTIS 140
+F G N G LG G + P ++ L + + +S G+ H A E
Sbjct: 84 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHVVLATTE--------- 134
Query: 141 TSRLWVWGQNQGSNFPR---------LFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
++ WG N S N + +V+CGS H + L+ G + AW
Sbjct: 135 -GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAW 193
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
GYN GQ+G G T PR + G + + + ++CG+ S AV + GEVY
Sbjct: 194 GYNNSGQVGSGSTANQ-PIPRRVTG-------CLQNKTVVNIACGQMCSMAVVDTGEVYV 245
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG GQLG L SG + P R+ AL GI ++ VACG H+ LT +G +YAWG +
Sbjct: 246 WGYNGNGQLG---LGSGGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 302
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRIHGWG 370
GQLG G N+S+ + I+ +++ AC +HT + G ++ WG
Sbjct: 303 YGQLGTG----------NKSNQSYPTPVIVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 352
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 116/233 (49%), Gaps = 24/233 (10%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HVV + G + WG+N Y QLG G T GL + + +++ +V+CG
Sbjct: 127 HVVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN--------KQVIEVACGS 178
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHSC 296
YHS ++ +GEV+ WG + GQ+G S + + +PRRV L + ++ACG + S
Sbjct: 179 YHSLVLTSDGEVFAWGYNNSGQVGSGSTAN---QPIPRRVTGCLQNKTVVNIACGQMCSM 235
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G +Y WG + GQLGLG + + R VQ VACG++H
Sbjct: 236 AVVDTGEVYVWGYNGNGQLGLGSGGNQPTPCRIAALQGIR----------VQRVACGYAH 285
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
TLV +G+++ WG NSYGQ + YP+PV V + R + HSA
Sbjct: 286 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPV--IVEKDRIIEIAACHSA 336
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 116/243 (47%), Gaps = 39/243 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G +P + L +N + +++ACG H+ + SDG
Sbjct: 137 VFTWGHNAYSQLG-NGTTNHGLVPCHISTNL------SNKQVIEVACGSYHSLVLTSDGE 189
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P +V LQ++ V +I+CG C+ A+ + T
Sbjct: 190 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKTVVNIACGQMCSMAV---------VDT 240
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N G N P A + +V+CG H + L++ G + AWG
Sbjct: 241 GEVYVWGYNGNGQLGLGSGGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 300
Query: 194 NEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G + + P ++ E ++I ++ +C H SAA ++ G VY
Sbjct: 301 NSYGQLGTGNKSNQSYPTPVIV-----------EKDRIIEIAACHSAHTSAAKTQGGHVY 349
Query: 251 TWG 253
WG
Sbjct: 350 MWG 352
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 20/151 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G Q P A R +ACG+ HT + +G
Sbjct: 243 VYVWGYNGNGQLGLGSGGNQ--------PTPCRIAALQGIRVQRVACGYAHTLVLTDEGQ 294
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
++ WGAN +GQLG G + + +P V + ++ +C AH +AA +
Sbjct: 295 VYAWGANSYGQLGTGNKSNQSYPTPVIVEKDRIIEIAACHSAHTSAAKTQ---------G 345
Query: 142 SRLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 346 GHVYMWGQCRGQSVTLPHLTHFSSTDDVFAC 376
>gi|229442455|gb|AAI72910.1| guanine nucleotide exchange factor p532 [synthetic construct]
Length = 2441
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 195/430 (45%), Gaps = 70/430 (16%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
MD + T+RP D ++ K +Y+WG GQ GR + +P P
Sbjct: 1556 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMVPAAAP--------- 1604
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
+ S+ + CG T + ++GT+ G +G+LG G + + LQ V +
Sbjct: 1605 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQL 1664
Query: 120 --SCGAH-CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI---- 168
SCG+ + A+ E E ++ WG ++ +L G P I
Sbjct: 1665 VTSCGSDGHSMALTESGE---------VFSWGDG---DYGKLGHGNSDRQRRPRQIEALQ 1712
Query: 169 ---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV--IKGYAKFLDE 223
+ Q+SCG H ++ G L +G +YG+LG G T RV ++GY
Sbjct: 1713 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY------ 1766
Query: 224 APELEKITQVSCGEYHSAAVSENGE-VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG 282
+I QV+CG H+ AVS +G V+ +G G G+LG L + + P+++ L G
Sbjct: 1767 -----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG---LGNSTAKSSPQKIDVLCG 1818
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
I IK VACG S ALT G +Y +G Q +GL P+ R+ + + IP+L
Sbjct: 1819 IGIKKVACGTQFSVALTKDGHVYTFG--QDRLIGL-PEGRA------RNHNRPQQIPVLA 1869
Query: 343 VPNGVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VR 399
GV + VA G HTL +G ++ WG NS GQ + + P+ V G+ VR
Sbjct: 1870 ---GVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVR 1926
Query: 400 KLAAGGGHSA 409
+++AG HSA
Sbjct: 1927 QISAGRCHSA 1936
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 143/307 (46%), Gaps = 43/307 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V SDG
Sbjct: 1683 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTSDGK 1734
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG++
Sbjct: 1735 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA----DGSM--- 1787
Query: 143 RLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T P I I +V+CG+ VAL++ G + +
Sbjct: 1788 -VWAFGDG---DYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTF 1843
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ I A + I V+ G H+ A++ NG+VY
Sbjct: 1844 GQDRLIGLPEG-RARNHNRPQQIPVLAGVI--------IEDVAVGAEHTLALASNGDVYA 1894
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWGGS 310
WG S GQLG L + P V L G ++ ++ G HS A T+ A G S
Sbjct: 1895 WGSNSEGQLG---LGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVS 1951
Query: 311 QAGQLGL 317
QLGL
Sbjct: 1952 VPLQLGL 1958
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 30/228 (13%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +GQL G V+ A AP + QV CG+ + + NG V
Sbjct: 1582 WGAGRHGQLAEA-------GRNVMVPAA-----APSFSQAQQVICGQNCTFVIQANGTVL 1629
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGALYAW 307
G GS G+LG + S D +L + AL G + + +CG HS ALT G +++W
Sbjct: 1630 ACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSW 1686
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G R R I L VQ+ +CG H+ V DG++
Sbjct: 1687 GDGDYGKLGHGNSDRQ---------RRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLF 1736
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
+G YG+ ++ P V G ++ ++A G H+ AV AD
Sbjct: 1737 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 1784
>gi|291402886|ref|XP_002718216.1| PREDICTED: hect domain and RCC1-like domain 1 [Oryctolagus cuniculus]
Length = 4860
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 195/430 (45%), Gaps = 70/430 (16%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
MD + T+RP D ++ K +Y+WG GQ GR + +P P
Sbjct: 3975 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMVPAAAP--------- 4023
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
+ S+ + CG T + ++GT+ G +G+LG G + + LQ V +
Sbjct: 4024 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQL 4083
Query: 120 --SCGAH-CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI---- 168
SCG+ + A+ E E ++ WG ++ +L G P I
Sbjct: 4084 VTSCGSDGHSMALTESGE---------VFSWGDG---DYGKLGHGNSDRQRRPRQIEALQ 4131
Query: 169 ---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV--IKGYAKFLDE 223
+ Q+SCG H ++ G L +G +YG+LG G T RV ++GY
Sbjct: 4132 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY------ 4185
Query: 224 APELEKITQVSCGEYHSAAVSENGE-VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG 282
+I QV+CG H+ AVS +G V+ +G G G+LG L + + P++V L G
Sbjct: 4186 -----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCG 4237
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL- 341
I IK VACG S ALT G +Y +G Q +GL P+ R+ + + +P+L
Sbjct: 4238 IGIKKVACGTQFSVALTKDGHVYTFG--QDRLIGL-PEGRA------RNHNRPQQVPVLA 4288
Query: 342 -VVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VR 399
VV ++ VA G HTL G ++ WG NS GQ + + P+ V G+ +R
Sbjct: 4289 GVV---IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIR 4345
Query: 400 KLAAGGGHSA 409
+++AG HSA
Sbjct: 4346 QISAGRCHSA 4355
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 186/405 (45%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ P+L P+ ++++ I G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQ------PKL--APSFSDAQ--TIEAGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG----T 138
+ G +G+LG G + +K+L E +SI ++ + +DG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQS---TLKKLTFEPHRSIK-------KVSSSKGSDGHTLAF 473
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ ++ WG + +P+L G ++C VS G H A++E G L
Sbjct: 474 TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGEL 532
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G + P ++K ++ + +VSCG H+ A+S++G
Sbjct: 533 YTWGEGDFGRLGHGDS-NSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 581
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ + AL G+FI+ V G S ALTS G +Y
Sbjct: 582 TVWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVY 636
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V ++ G SH L D
Sbjct: 637 AWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-ISIGDSHCLALSHDNE 685
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 143/309 (46%), Gaps = 47/309 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V SDG
Sbjct: 4102 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTSDGK 4153
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG++
Sbjct: 4154 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA----DGSM--- 4206
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNT------IIC-----QVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T + ++C +V+CG+ VAL++ G + +
Sbjct: 4207 -VWAFGDG---DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4262
Query: 192 GYNEYGQL--GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
G + L GR Q V+ G I V+ G H+ A++ G+V
Sbjct: 4263 GQDRLIGLPEGRARNHNRPQQVPVLAGVV-----------IEDVAVGAEHTLALASTGDV 4311
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWG 308
Y WG S GQLG L + P V L G I+ ++ G HS A T+ A G
Sbjct: 4312 YAWGSNSEGQLG---LGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPVPPRAPG 4368
Query: 309 GSQAGQLGL 317
S QLGL
Sbjct: 4369 VSVPLQLGL 4377
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P I I +V GS +AL+ G + AW
Sbjct: 583 -VWSFG---GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I +S G+ H A+S + EVY
Sbjct: 639 GCG--ACLGCGSSEATALRPKLIEELAA--------TRIVDISIGDSHCLALSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDGI I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 30/228 (13%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +GQL G V+ A AP + QV CG+ + + NG V
Sbjct: 4001 WGAGRHGQLAEA-------GRNVMVPAA-----APSFSQAQQVICGQNCTFVIQANGTVL 4048
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGALYAW 307
G GS G+LG + S D +L + AL G + + +CG HS ALT G +++W
Sbjct: 4049 ACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSW 4105
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G R R I L VQ+ +CG H+ V DG++
Sbjct: 4106 GDGDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLF 4155
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
+G YG+ ++ P V G ++ ++A G H+ AV AD
Sbjct: 4156 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 4203
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VSE EVY WG S QL G +E + + +A + + G + +++ G
Sbjct: 368 VSETCEVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ A G G+LGLG +L + + R+I + G HTL +
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RSIKKVSSSKG------SDGHTLAFTT 475
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+G + WG YG+ + S+ YP + + G+V ++AG HSA + +
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
>gi|157821067|ref|NP_001100990.1| E3 ubiquitin-protein ligase HERC2 [Rattus norvegicus]
gi|149031474|gb|EDL86454.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2 (predicted) [Rattus
norvegicus]
Length = 4779
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 179/412 (43%), Gaps = 69/412 (16%)
Query: 20 KSAIYVWGYNHSGQTG-RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
++ ++VWG N Q G KG + ++ P + N + +A G + AV
Sbjct: 2902 RTKVFVWGLNDKDQLGGLKGSKIKV-------PSFSETLSALNV--VQVAGGSKSLFAVT 2952
Query: 79 SDGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRE 134
+G +++ G G+LG G G P ++ L S VK ++ G H TA
Sbjct: 2953 VEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV---- 3008
Query: 135 NDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSE 184
DG +++ WG+ PRL T I ++CGS H AL+
Sbjct: 3009 -DG-----KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTS 3060
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGP--RVIKGYAKFLDEAPELEKITQVSCG--EYHS 240
G L WG EYG+LG G L+ +V+ G+ ++ QV+CG + +
Sbjct: 3061 SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-----------RVIQVACGSRDAQT 3109
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
A+++ G V++WG G G+LG + + +P+ + L+G + + CG S ALT
Sbjct: 3110 LALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTK 3166
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTL 358
G ++ WG +LG G SD + R ++ G ++V A G H L
Sbjct: 3167 SGVVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRGKKIVHVAVGALHCL 3214
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
G+++ WG N +GQ N +T P+ V G+ + ++A G HS
Sbjct: 3215 AVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3266
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3012 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 3063
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 3064 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 3116
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 3117 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3173
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV+++G+VY
Sbjct: 3174 GKGDYFRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDSGQVYA 3224
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3225 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3270
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 2951 VTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQI-----TALSSYVVKKVAVHSGGRHATA 3005
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+
Sbjct: 3006 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------ 3059
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 3060 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3113
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 3114 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 3164
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH S K P+ V L G I VA G +H A+T G
Sbjct: 3165 TKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDSGQ 3221
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 3222 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3268
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 144/327 (44%), Gaps = 50/327 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +D+A G H+A V + G
Sbjct: 4005 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRGIEV--VDVAAGGAHSACVTAAGD 4056
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG E + P+ V+ LQ V I+CG+ + +D T+
Sbjct: 4057 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLC--LTDDDTV--- 4111
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 4112 --WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4169
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 4170 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4220
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G + VACG H+ AW S+
Sbjct: 4221 NDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAWSTSKPAS 4268
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPIL 341
G P + +P E + + + IPI+
Sbjct: 4269 AGKLP-----AQVPMEYN-HLQEIPII 4289
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 174/411 (42%), Gaps = 76/411 (18%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P C A A R + + G + AV +DG
Sbjct: 3899 IYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALATLRPVQLIGGEQTLFAVTADG 3949
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 3950 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE------- 4002
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG+ + PR+ + V+ G H ++ G L
Sbjct: 4003 ---GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAGDL 4057
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSEN 246
WG YG+LG + + L+ P+++ EA + ++ ++C G+ + ++++
Sbjct: 4058 YTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVIDIACGSGDAQTLCLTDD 4108
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4109 DTVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 4165
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTL 358
WG +LG G SD + R P VQ +A G H +
Sbjct: 4166 WGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCV 4207
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
DG ++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4208 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4258
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 128/276 (46%), Gaps = 25/276 (9%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N P+L G + N + H +AL+ G + +WG + G+LG G
Sbjct: 417 RVYTQAYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG 476
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P+VI ++ + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 477 DTVP-LEEPKVISAFSG----KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 531
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + E +P V L G+ + DVACG + A+T G +++WG G+LG G
Sbjct: 532 ---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 588
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D V V CG ++ +DG+++ WG +
Sbjct: 589 DGCKTPKLIEKLQDL------------DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 636
Query: 379 NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ + YP ++ G +V +AAG H L +
Sbjct: 637 HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 672
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 122/253 (48%), Gaps = 30/253 (11%)
Query: 134 ENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N +GS + + QV+ GS + A++
Sbjct: 2896 ESTATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2954
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + + G G+LG G++ + PR I + ++ K V G H+ A++
Sbjct: 2955 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYV------VKKVAVHSGGRHATALTV 3008
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS ALTS G LY
Sbjct: 3009 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELY 3065
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRD 363
WG + G+LG G T + + +L+ +Q VACG + TL +
Sbjct: 3066 TWGLGEYGRLGHGDNTTQLKP---------KMVKVLLGHRVIQ-VACGSRDAQTLALTDE 3115
Query: 364 GRIHGWGYNSYGQ 376
G + WG +G+
Sbjct: 3116 GLVFSWGDGDFGK 3128
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 134/310 (43%), Gaps = 53/310 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHC 125
+ G +H A++S+G +++WG E G+LG G P ++ L+ E V + GAH
Sbjct: 3989 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4048
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCG 175
A L+ WG+ + P+L A + +I ++CG
Sbjct: 4049 ACVTA----------AGDLYTWGKGRYGRLGHSDSEDQLKPKLV-EALQGHRVI-DIACG 4096
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + L++ + +WG +YG+LGRG +G + P I + +V
Sbjct: 4097 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVKV 4147
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G VYTWG G +LGH S D PR+V L G + +A G +
Sbjct: 4148 ECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSL 4204
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLV 350
H T G +Y WG + GQLG G T P LV V V
Sbjct: 4205 HCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRV 4251
Query: 351 ACGHSHTLVY 360
ACG +HTL +
Sbjct: 4252 ACGSAHTLAW 4261
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 45/285 (15%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+L A N + H A+A+ G +++WG + G+LG G + P+ +
Sbjct: 428 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVI 487
Query: 109 KQLQ----SEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT 164
+ V I+CG+ +AAI E L+ WG+ N+ RL G+
Sbjct: 488 SAFSGKQAGKHVVHIACGSTYSAAITAEGE---------LYTWGRG---NYGRLGHGSSE 535
Query: 165 PNTI-----------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
I + V+CGS +A++E G + +WG +YG+LGRG +G + P
Sbjct: 536 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTP 594
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
++I+ + +V CG S A++++G+VY+WG G +LGH G +E
Sbjct: 595 KLIEKLQDL--------DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH-----GTEE 641
Query: 272 LL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ P+ + L G + DVA G H ALT +++WG + Q
Sbjct: 642 HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 686
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 137/295 (46%), Gaps = 37/295 (12%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG G+ G G L PK + G AG + + IACG ++AA
Sbjct: 456 LAATGEVYSWGCGDGGRLGH-GDTVPLEEPKVIS-AFSGKQAGKHV--VHIACGSTYSAA 511
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E P V L+ V ++CG+ +A
Sbjct: 512 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA------ 565
Query: 137 GTISTSRLWVWGQ----------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
++W WG + G P+L + I +V CGS +AL++ G
Sbjct: 566 -VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVI--KVRCGSQFSIALTKDG 622
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ +WG + +LG G T E ++ P++++G + +K+ V+ G H A++E+
Sbjct: 623 QVYSWGKGDNQRLGHG-TEEHVRYPKLLEGL--------QGKKVIDVAAGSTHCLALTED 673
Query: 247 GEVYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
EV++W GS Q H +L+ E P + LD I +ACG S A +S
Sbjct: 674 SEVHSW--GSNDQCQHFDTLRVTKPE--PTALPGLDTKHIVGIACGPAQSFAWSS 724
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 97/212 (45%), Gaps = 28/212 (13%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ ++CGS + A++ G L WG YG+LG G + E P ++ G
Sbjct: 499 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-SSEDEAIPMLVAGLKGL-------- 549
Query: 229 KITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
K+ V+CG + + AV+ENG+V++WG G G+LG D P+ + L + +
Sbjct: 550 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR---GGSDGCKTPKLIEKLQDLDVI 606
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
V CG S ALT G +Y+WG +LG G ++ + R +L G
Sbjct: 607 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG------------TEEHVRYPKLLEGLQG 654
Query: 347 VQL--VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
++ VA G +H L D +H WG N Q
Sbjct: 655 KKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 686
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 100/219 (45%), Gaps = 46/219 (21%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ QV+C + LS G + YN + P++++G A + +
Sbjct: 399 VMQVACAEKRFLILSRNGRVYTQAYNS-----------DMLAPQLVQGLA-----SRNIV 442
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI--- 283
KI S G +H A++ GEVY+WG G G+LGH GD L P+ + A G
Sbjct: 443 KIAAHSDG-HHYLALAATGEVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAG 496
Query: 284 -FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
+ +ACG +S A+T++G LY WG G+LG G + IP+LV
Sbjct: 497 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-------------SSEDEAIPMLV 543
Query: 343 V-PNGVQL--VAC--GHSHTLVYMRDGRIHGWGYNSYGQ 376
G+++ VAC G + TL +G++ WG YG+
Sbjct: 544 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 582
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 110/281 (39%), Gaps = 69/281 (24%)
Query: 186 GLLQAWGYNEYGQLGRGI---------TCEGLQGPRVIK--------------------G 216
G + WG+N GQLG GI CE L R ++ G
Sbjct: 3897 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3955
Query: 217 Y----------AKFLDEAPELEKITQ-------VSCGEYHSAAVSENGEVYTWGLGSVGQ 259
Y + + LE I V+ G H A+S GEVY+WG G+
Sbjct: 3956 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4015
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LGH + D+ PR + +L GI + DVA GG HS +T+ G LY WG + G+LG
Sbjct: 4016 LGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG--- 4069
Query: 320 QTRSFSLIPNESDTYFRNIPILVVP---NGVQLVAC--GHSHTLVYMRDGRIHGWGYNSY 374
SD+ + P LV + V +AC G + TL D + WG Y
Sbjct: 4070 ----------HSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDY 4119
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADA 414
G+ S P +D G V K+ G S L +
Sbjct: 4120 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4160
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG + G G + +R P+Q+ + + IA G H DG
Sbjct: 4162 AVYTWGKGDYHRLGH-GSDDHVRRPRQVQ-------GLQGKKVIAIATGSLHCVCCTEDG 4213
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
++TWG N+ GQLGDGT + P V LQ + V ++CG+ T A
Sbjct: 4214 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4260
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 83/224 (37%), Gaps = 39/224 (17%)
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G+ Y + I CEGL V+ QV+C E +S NG VYT
Sbjct: 378 GWKYYANVIGPIQCEGLASLGVM-----------------QVACAEKRFLILSRNGRVYT 420
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWGG 309
S L P+ V L I +A G H AL + G +Y+WG
Sbjct: 421 QAYNS-------------DMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGC 467
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGW 369
G+LG G +P E V +ACG +++ +G ++ W
Sbjct: 468 GDGGRLGHG------DTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTW 521
Query: 370 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLA 412
G +YG+ + S P V G +V +A G G + LA
Sbjct: 522 GRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 565
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 82/218 (37%), Gaps = 62/218 (28%)
Query: 246 NGEVYTWGLGSVGQLG--------------------HCSLQSGDKELL------------ 273
+G +Y WG GQLG L G++ L
Sbjct: 3896 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3955
Query: 274 -----------------PRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWGGSQAGQ 314
P + ++ +FIK VA GG H AL+S+G +Y+WG ++ G+
Sbjct: 3956 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4015
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LG G RS P ++ R I ++ VA G +H+ G ++ WG Y
Sbjct: 4016 LGHG--NRSPCDRPRVIES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRY 4065
Query: 375 GQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
G+ + S P V+ G V +A G G + L
Sbjct: 4066 GRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTL 4103
>gi|334314433|ref|XP_003340037.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Monodelphis
domestica]
Length = 4790
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 195/430 (45%), Gaps = 70/430 (16%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
MD + T+RP D ++ K +Y+WG GQ GR + IP P
Sbjct: 3905 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMIPAAAP--------- 3953
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
+ S+ + CG T + ++GT+ G +G+LG G + + LQ V +
Sbjct: 3954 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQL 4013
Query: 120 --SCGAH-CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI---- 168
SCG+ + A+ E E ++ WG ++ +L G P I
Sbjct: 4014 VTSCGSDGHSMALTESGE---------VFSWGDG---DYGKLGHGNSDRQRRPRQIEALQ 4061
Query: 169 ---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV--IKGYAKFLDE 223
+ Q+SCG H ++ G L +G +YG+LG G T RV ++GY
Sbjct: 4062 GEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY------ 4115
Query: 224 APELEKITQVSCGEYHSAAVSENGE-VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG 282
+I QV+CG H+ AVS +G V+ +G G G+LG L + + P++V L G
Sbjct: 4116 -----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCG 4167
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL- 341
I IK VACG S ALT G +Y +G Q +GL P+ R+ + + IP+L
Sbjct: 4168 IGIKKVACGTQFSVALTKDGHVYTFG--QDRLIGL-PEGRA------RNHNRPQQIPVLA 4218
Query: 342 -VVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VR 399
VV ++ +A G HTL G ++ WG NS GQ + + P+ + G+ +R
Sbjct: 4219 GVV---IEDIAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLITILQGKNIR 4275
Query: 400 KLAAGGGHSA 409
+++AG HSA
Sbjct: 4276 QISAGRCHSA 4285
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 180/405 (44%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ P+L P+ ++++ I G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQ------PKL--APSFSDAQ--TIEAGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA----HCTAAIAEPRENDGT 138
+ G +G+LG G + +K+ +K +S H A E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE------- 476
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG + +P+L G ++C VS G H A++E G L
Sbjct: 477 ---GEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGEL 532
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G P ++K ++ + +VSCG H+ A+S++G
Sbjct: 533 YTWGEGDFGRLGHG-DSNSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 581
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ + AL G+FI+ V G S ALTS G +Y
Sbjct: 582 TVWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVY 636
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V ++ G SH L D
Sbjct: 637 AWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-ISIGDSHCLALSHDNE 685
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHS 730
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 143/307 (46%), Gaps = 43/307 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V SDG
Sbjct: 4032 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVIQMSCGFKHSAVVTSDGK 4083
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG++
Sbjct: 4084 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA----DGSM--- 4136
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNT------IIC-----QVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T + ++C +V+CG+ VAL++ G + +
Sbjct: 4137 -VWAFGDG---DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4192
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ I A + I ++ G H+ A++ G+VY
Sbjct: 4193 GQDRLIGLPEG-RARNHNRPQQIPVLAGVV--------IEDIAVGAEHTLALASTGDVYA 4243
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYAWGGS 310
WG S GQLG L + P + L G I+ ++ G HS A T S A G S
Sbjct: 4244 WGSNSEGQLG---LGHTNHVREPTLITILQGKNIRQISAGRCHSAAWTASPVPPRAPGVS 4300
Query: 311 QAGQLGL 317
QLGL
Sbjct: 4301 VPLQLGL 4307
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P I I +V GS +AL+ G + AW
Sbjct: 583 -VWSFG---GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I +S G+ H A+S + EVY
Sbjct: 639 GCG--ACLGCGSSEATALRPKLIEELAA--------TRIVDISIGDSHCLALSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDG+ I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGVAIQQISAGTSHSLAWTA 735
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 99/228 (43%), Gaps = 30/228 (13%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +GQL G V+ A AP + QV CG+ + + NG V
Sbjct: 3931 WGAGRHGQLAEA-------GRNVMIPAA-----APSFSQAQQVICGQNCTFVIQANGTVL 3978
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGALYAW 307
G GS G+LG + S D +L + AL G + + +CG HS ALT G +++W
Sbjct: 3979 ACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSW 4035
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G R R I L +Q+ +CG H+ V DG++
Sbjct: 4036 GDGDYGKLGHGNSDR---------QRRPRQIEALQGEEVIQM-SCGFKHSAVVTSDGKLF 4085
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
+G YG+ ++ P V G ++ ++A G H+ AV AD
Sbjct: 4086 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 4133
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VSE EVY WG S QL G +E + + +A + + G + +++ G
Sbjct: 368 VSETCEVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ A G G+LGLG +L + + R+I + G HTL +
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RSIKKVSSSKG------SDGHTLAFTT 475
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+G + WG YG+ + S+ YP + + G+V ++AG HSA + +
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
>gi|61563742|ref|NP_060382.3| probable E3 ubiquitin-protein ligase HERC6 isoform 1 [Homo sapiens]
gi|74750679|sp|Q8IVU3.2|HERC6_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC6; AltName:
Full=HECT domain and RCC1-like domain-containing protein
6
gi|48686728|gb|AAQ14893.1|AF336798_1 HERC6 [Homo sapiens]
gi|66840150|gb|AAH42047.2| Hect domain and RLD 6 [Homo sapiens]
gi|194381386|dbj|BAG58647.1| unnamed protein product [Homo sapiens]
Length = 1022
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 123/242 (50%), Gaps = 19/242 (7%)
Query: 168 IICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL 227
I+ VSCG H +A+ G + AWG GQLG G E P+ I
Sbjct: 76 IVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDI------- 128
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
KI QVSCG YHS A+S++ +V++WG S GQLG + + P+RV +L+GI +
Sbjct: 129 -KIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQ 185
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN-G 346
VA GG HS AL+ G + WG + AGQL L + +P +S+ + + + + N G
Sbjct: 186 VAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRN-----VPVQSN---KPLSVGALKNLG 237
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGG 406
V ++CG +HT V +DG++ +G N GQ + P V+ G V ++ G
Sbjct: 238 VVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSY 297
Query: 407 HS 408
H+
Sbjct: 298 HT 299
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 160/362 (44%), Gaps = 55/362 (15%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
L A G H+ + ++ + + G N GQLG + + PE ++ L++ V +SCG
Sbjct: 26 LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKE 85
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQ-NQGS----NFPRLFWGAFTPNTI-------ICQV 172
+ A+ R++ WG ++G F + +FTP I I QV
Sbjct: 86 HSLAVCH---------KGRVFAWGAGSEGQLGIGEFKEI---SFTPKKIMTLNDIKIIQV 133
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
SCG H +ALS+ + +WG N +GQLG G P+ ++ L+ P + Q
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRS----LEGIP----LAQ 185
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
V+ G HS A+S G + WG S GQL + P V AL + + ++CG
Sbjct: 186 VAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGD 245
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLV 350
H+ LT G ++ +G +++GQLG P T + P LV + V +
Sbjct: 246 AHTAVLTQDGKVFTFGDNRSGQLGYSP-------------TPEKRGPQLVERIDGLVSQI 292
Query: 351 ACGHSHTLVYMR-DGRIHGWGYN-------SYGQAANEKSTYAWYPSPVDWCVGEVRKLA 402
CG HTL Y+ G++ +G+ ++ +A E + S D+ +V+ +
Sbjct: 293 DCGSYHTLAYVHTTGQVVSFGHGPSDTSKPTHPEALTENFDISCLISAEDFVDVQVKHIF 352
Query: 403 AG 404
AG
Sbjct: 353 AG 354
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 142/315 (45%), Gaps = 60/315 (19%)
Query: 27 GYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLD-IACGHEHTAAVASDGTLFT 85
G N GQ GR+G +R +LP + + +D ++CG EH+ AV G +F
Sbjct: 48 GDNSRGQLGRRGAQR-----GELPEPI----QALETLIVDLVSCGKEHSLAVCHKGRVFA 98
Query: 86 WGANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRL 144
WGA GQLG G +E P+K+ L + +SCG + + A+++ S++
Sbjct: 99 WGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK---------DSQV 149
Query: 145 WVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+ WG+N G FP +P + + QV+ G H ALS CG W
Sbjct: 150 FSWGKNSHGQLGLGKEFP----SQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW 205
Query: 192 GYNEYGQL---GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
G N GQL GR + + + V G K L + +SCG+ H+A ++++G+
Sbjct: 206 GSNSAGQLALSGRNVPVQSNKPLSV--GALKNLG-------VVYISCGDAHTAVLTQDGK 256
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
V+T+G GQLG+ ++ P+ V +DG+ + + CG H+ A Y
Sbjct: 257 VFTFGDNRSGQLGY---SPTPEKRGPQLVERIDGL-VSQIDCGSYHTLA-------YVHT 305
Query: 309 GSQAGQLGLGPQTRS 323
Q G GP S
Sbjct: 306 TGQVVSFGHGPSDTS 320
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 95/186 (51%), Gaps = 14/186 (7%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
++ Q + GE HS + N V + G S GQLG Q G+ LP + AL+ + + V
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGE---LPEPIQALETLIVDLV 80
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
+CG HS A+ KG ++AWG GQLG+G + + S P + T +I I+
Sbjct: 81 SCGKEHSLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKIMT-LNDIKIIQ------ 132
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGG 406
V+CGH H+L +D ++ WG NS+GQ K + P V G + ++AAGG
Sbjct: 133 -VSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 191
Query: 407 HSAVLA 412
HS L+
Sbjct: 192 HSFALS 197
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 117/242 (48%), Gaps = 25/242 (10%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG GQ G + PK++ + + + ++CGH H+ A++
Sbjct: 93 KGRVFAWGAGSEGQLGIGEFKEISFTPKKIM-------TLNDIKIIQVSCGHYHSLALSK 145
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISC-GAHCTA-AIAEPREND 136
D +F+WG N GQLG G E + P++V+ L+ + ++ GAH A ++
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW 205
Query: 137 GTISTSRLWVWGQN--QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
G+ S +L + G+N SN P L GA N + +SCG H L++ G + +G N
Sbjct: 206 GSNSAGQLALSGRNVPVQSNKP-LSVGALK-NLGVVYISCGDAHTAVLTQDGKVFTFGDN 263
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEVYTWG 253
GQLG T E +GP++++ ++Q+ CG YH+ A V G+V ++G
Sbjct: 264 RSGQLGYSPTPEK-RGPQLVERIDGL---------VSQIDCGSYHTLAYVHTTGQVVSFG 313
Query: 254 LG 255
G
Sbjct: 314 HG 315
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 58/144 (40%), Gaps = 12/144 (8%)
Query: 270 KELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPN 329
+EL RR G + A G HS L + + + G + GQLG R
Sbjct: 10 RELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQR------G 63
Query: 330 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ-AANEKSTYAWYP 388
E + + L+ V LV+CG H+L GR+ WG S GQ E ++ P
Sbjct: 64 ELPEPIQALETLI----VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTP 119
Query: 389 SPVDWCVGEVRKLAAGGGHSAVLA 412
+ + +++ + GH LA
Sbjct: 120 KKI-MTLNDIKIIQVSCGHYHSLA 142
>gi|148689922|gb|EDL21869.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_b [Mus
musculus]
Length = 4841
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 179/412 (43%), Gaps = 69/412 (16%)
Query: 20 KSAIYVWGYNHSGQTG-RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
++ ++VWG N Q G KG + ++ P + N + +A G + AV
Sbjct: 2964 RTKVFVWGLNDKDQLGGLKGSKIKV-------PSFSETLSALNV--VQVAGGSKSLFAVT 3014
Query: 79 SDGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRE 134
+G +++ G G+LG G G P ++ L S VK ++ G H TA
Sbjct: 3015 VEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV---- 3070
Query: 135 NDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSE 184
DG +++ WG+ PRL T I ++CGS H AL+
Sbjct: 3071 -DG-----KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTS 3122
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGP--RVIKGYAKFLDEAPELEKITQVSCG--EYHS 240
G L WG EYG+LG G L+ +V+ G+ ++ QV+CG + +
Sbjct: 3123 SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-----------RVIQVACGSRDAQT 3171
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
A+++ G V++WG G G+LG + + +P+ + L+G + + CG S ALT
Sbjct: 3172 LALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTK 3228
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTL 358
G ++ WG +LG G SD + R ++ G ++V A G H L
Sbjct: 3229 SGVVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRGKKIVHVAVGALHCL 3276
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
G+++ WG N +GQ N +T P+ V G+ + ++A G HS
Sbjct: 3277 AVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3328
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3074 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 3125
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 3126 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 3178
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 3179 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3235
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV+++G+VY
Sbjct: 3236 GKGDYFRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDSGQVYA 3286
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3287 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3332
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 3013 VTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQI-----TALSSYVVKKVAVHSGGRHATA 3067
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+
Sbjct: 3068 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------ 3121
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 3122 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3175
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 3176 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 3226
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH S K P+ V L G I VA G +H A+T G
Sbjct: 3227 TKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDSGQ 3283
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 3284 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3330
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 144/327 (44%), Gaps = 50/327 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +D+A G H+A V + G
Sbjct: 4067 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRGIEV--VDVAAGGAHSACVTAAGD 4118
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG E + P+ V+ LQ V I+CG+ + +D T+
Sbjct: 4119 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLC--LTDDDTV--- 4173
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 4174 --WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4231
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 4232 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4282
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G + VACG H+ AW S+
Sbjct: 4283 NDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAWSTSKPAS 4330
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPIL 341
G P + +P E + + + IPI+
Sbjct: 4331 AGKLP-----AQVPMEYN-HLQEIPII 4351
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 174/411 (42%), Gaps = 76/411 (18%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P C A A R + + G + AV +DG
Sbjct: 3961 IYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALATLRPVQLIGGEQTLFAVTADG 4011
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 4012 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE------- 4064
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG+ + PR+ + V+ G H ++ G L
Sbjct: 4065 ---GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAGDL 4119
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSEN 246
WG YG+LG + + L+ P+++ EA + ++ ++C G+ + ++++
Sbjct: 4120 YTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVIDIACGSGDAQTLCLTDD 4170
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4171 DTVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 4227
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTL 358
WG +LG G SD + R P VQ +A G H +
Sbjct: 4228 WGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCV 4269
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
DG ++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4270 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4320
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 128/276 (46%), Gaps = 25/276 (9%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N P+L G + N + H +AL+ G + +WG + G+LG G
Sbjct: 477 RVYTQAYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG 536
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P+VI ++ + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 537 DTVP-LEEPKVISAFSG----KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 591
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + E +P V L G+ + DVACG + A+T G +++WG G+LG G
Sbjct: 592 ---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 648
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D V V CG ++ +DG+++ WG +
Sbjct: 649 DGCKTPKLIEKLQDL------------DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 696
Query: 379 NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ + YP ++ G +V +AAG H L +
Sbjct: 697 HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 732
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 122/253 (48%), Gaps = 30/253 (11%)
Query: 134 ENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N +GS + + QV+ GS + A++
Sbjct: 2958 ESTATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3016
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + + G G+LG G++ + PR I + ++ K V G H+ A++
Sbjct: 3017 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYV------VKKVAVHSGGRHATALTV 3070
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS ALTS G LY
Sbjct: 3071 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELY 3127
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRD 363
WG + G+LG G T + + +L+ +Q VACG + TL +
Sbjct: 3128 TWGLGEYGRLGHGDNTTQLKP---------KMVKVLLGHRVIQ-VACGSRDAQTLALTDE 3177
Query: 364 GRIHGWGYNSYGQ 376
G + WG +G+
Sbjct: 3178 GLVFSWGDGDFGK 3190
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 134/310 (43%), Gaps = 53/310 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHC 125
+ G +H A++S+G +++WG E G+LG G P ++ L+ E V + GAH
Sbjct: 4051 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4110
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCG 175
A L+ WG+ + P+L A + +I ++CG
Sbjct: 4111 ACVTA----------AGDLYTWGKGRYGRLGHSDSEDQLKPKLV-EALQGHRVI-DIACG 4158
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + L++ + +WG +YG+LGRG +G + P I + +V
Sbjct: 4159 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVKV 4209
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G VYTWG G +LGH S D PR+V L G + +A G +
Sbjct: 4210 ECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSL 4266
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLV 350
H T G +Y WG + GQLG G T P LV V V
Sbjct: 4267 HCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRV 4313
Query: 351 ACGHSHTLVY 360
ACG +HTL +
Sbjct: 4314 ACGSAHTLAW 4323
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 45/285 (15%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+L A N + H A+A+ G +++WG + G+LG G + P+ +
Sbjct: 488 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVI 547
Query: 109 KQLQ----SEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT 164
+ V I+CG+ +AAI E L+ WG+ N+ RL G+
Sbjct: 548 SAFSGKQAGKHVVHIACGSTYSAAITAEGE---------LYTWGRG---NYGRLGHGSSE 595
Query: 165 PNTI-----------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
I + V+CGS +A++E G + +WG +YG+LGRG +G + P
Sbjct: 596 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTP 654
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
++I+ + +V CG S A++++G+VY+WG G +LGH G +E
Sbjct: 655 KLIEKLQDL--------DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH-----GTEE 701
Query: 272 LL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ P+ + L G + DVA G H ALT +++WG + Q
Sbjct: 702 HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 746
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 137/295 (46%), Gaps = 37/295 (12%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG G+ G G L PK + G AG + + IACG ++AA
Sbjct: 516 LAATGEVYSWGCGDGGRLGH-GDTVPLEEPKVIS-AFSGKQAGKHV--VHIACGSTYSAA 571
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E P V L+ V ++CG+ +A
Sbjct: 572 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA------ 625
Query: 137 GTISTSRLWVWGQ----------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
++W WG + G P+L + I +V CGS +AL++ G
Sbjct: 626 -VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVI--KVRCGSQFSIALTKDG 682
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ +WG + +LG G T E ++ P++++G + +K+ V+ G H A++E+
Sbjct: 683 QVYSWGKGDNQRLGHG-TEEHVRYPKLLEGL--------QGKKVIDVAAGSTHCLALTED 733
Query: 247 GEVYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
EV++W GS Q H +L+ E P + LD I +ACG S A +S
Sbjct: 734 SEVHSW--GSNDQCQHFDTLRVTKPE--PTALPGLDSKHIVGIACGPAQSFAWSS 784
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 97/212 (45%), Gaps = 28/212 (13%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ ++CGS + A++ G L WG YG+LG G + E P ++ G
Sbjct: 559 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-SSEDEAIPMLVAGLKGL-------- 609
Query: 229 KITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
K+ V+CG + + AV+ENG+V++WG G G+LG D P+ + L + +
Sbjct: 610 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR---GGSDGCKTPKLIEKLQDLDVI 666
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
V CG S ALT G +Y+WG +LG G ++ + R +L G
Sbjct: 667 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG------------TEEHVRYPKLLEGLQG 714
Query: 347 VQL--VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
++ VA G +H L D +H WG N Q
Sbjct: 715 KKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 746
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 100/219 (45%), Gaps = 46/219 (21%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ QV+C + LS G + YN + P++++G A + +
Sbjct: 459 VMQVACAEKRFLILSRNGRVYTQAYNS-----------DMLAPQLVQGLA-----SRNIV 502
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI--- 283
KI S G +H A++ GEVY+WG G G+LGH GD L P+ + A G
Sbjct: 503 KIAAHSDG-HHYLALAATGEVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAG 556
Query: 284 -FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
+ +ACG +S A+T++G LY WG G+LG G + IP+LV
Sbjct: 557 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-------------SSEDEAIPMLV 603
Query: 343 V-PNGVQL--VAC--GHSHTLVYMRDGRIHGWGYNSYGQ 376
G+++ VAC G + TL +G++ WG YG+
Sbjct: 604 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 642
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 110/281 (39%), Gaps = 69/281 (24%)
Query: 186 GLLQAWGYNEYGQLGRGI---------TCEGLQGPRVIK--------------------G 216
G + WG+N GQLG GI CE L R ++ G
Sbjct: 3959 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4017
Query: 217 Y----------AKFLDEAPELEKITQ-------VSCGEYHSAAVSENGEVYTWGLGSVGQ 259
Y + + LE I V+ G H A+S GEVY+WG G+
Sbjct: 4018 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4077
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LGH + D+ PR + +L GI + DVA GG HS +T+ G LY WG + G+LG
Sbjct: 4078 LGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG--- 4131
Query: 320 QTRSFSLIPNESDTYFRNIPILVVP---NGVQLVAC--GHSHTLVYMRDGRIHGWGYNSY 374
SD+ + P LV + V +AC G + TL D + WG Y
Sbjct: 4132 ----------HSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDY 4181
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADA 414
G+ S P +D G V K+ G S L +
Sbjct: 4182 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4222
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG + G G + +R P+Q+ + + IA G H DG
Sbjct: 4224 AVYTWGKGDYHRLGH-GSDDHVRRPRQVQ-------GLQGKKVIAIATGSLHCVCCTEDG 4275
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
++TWG N+ GQLGDGT + P V LQ + V ++CG+ T A
Sbjct: 4276 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4322
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 83/224 (37%), Gaps = 39/224 (17%)
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G+ Y + I CEGL V+ QV+C E +S NG VYT
Sbjct: 438 GWKYYANVIGPIQCEGLASLGVM-----------------QVACAEKRFLILSRNGRVYT 480
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWGG 309
S L P+ V L I +A G H AL + G +Y+WG
Sbjct: 481 QAYNS-------------DMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGC 527
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGW 369
G+LG G +P E V +ACG +++ +G ++ W
Sbjct: 528 GDGGRLGHG------DTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTW 581
Query: 370 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLA 412
G +YG+ + S P V G +V +A G G + LA
Sbjct: 582 GRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 625
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 82/218 (37%), Gaps = 62/218 (28%)
Query: 246 NGEVYTWGLGSVGQLG--------------------HCSLQSGDKELL------------ 273
+G +Y WG GQLG L G++ L
Sbjct: 3958 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4017
Query: 274 -----------------PRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWGGSQAGQ 314
P + ++ +FIK VA GG H AL+S+G +Y+WG ++ G+
Sbjct: 4018 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4077
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LG G RS P ++ R I ++ VA G +H+ G ++ WG Y
Sbjct: 4078 LGHG--NRSPCDRPRVIES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRY 4127
Query: 375 GQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
G+ + S P V+ G V +A G G + L
Sbjct: 4128 GRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTL 4165
>gi|356507929|ref|XP_003522715.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Glycine max]
Length = 559
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 130/466 (27%), Positives = 194/466 (41%), Gaps = 115/466 (24%)
Query: 8 GETARPVDNIPAKSA----------IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCP 57
G+ +R V ++ A A +Y WG G+ G G E+ +P QL FG P
Sbjct: 12 GQVSRKVVDVAAGEAHTLLLTGDGSVYCWGKGMFGRLG-TGAEKDELLPVQLN---FGYP 67
Query: 58 ----AGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRK---------- 103
+ + IA G H+ A+A DG ++ WG N +GQLG EE
Sbjct: 68 NPNGTEGTFKIVGIAAGAYHSLALAEDGAVWCWGYNFYGQLGINGEESHDNEYAVGDNSL 127
Query: 104 -----------HPEK-----VKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVW 147
HP V + +S+ I C ++ +N GT LW+W
Sbjct: 128 VPRILNKFLELHPPDSSSSGVSEAESKTPLKI-CAVKAGGMMSLAIDNHGT-----LWMW 181
Query: 148 GQ--NQGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECG--------LLQA 190
G Q +FTP + + +V+CG+ HVVAL G + +
Sbjct: 182 GNCPRQSKEGGLALVSSFTPTPVWDFQGHTVVKVACGNEHVVALVSAGETYNGEDLVCYS 241
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE-- 248
WGYN GQLG G L P V++ F +E+P +V+CG +H+A ++ +
Sbjct: 242 WGYNSRGQLGLGDRESRLH-PEVVR---TFDEESP-----YEVACGAFHTALLTRKKKPS 292
Query: 249 ------VYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL-DGIFIKDVACGGVHSCALTSK 301
+T+GLG GQLGH + QS L P V L + + V CG H+ ++S
Sbjct: 293 DTVESTCWTFGLGDNGQLGHGTTQS---TLFPTPVKELPQNVSLICVDCGLFHTSVVSSD 349
Query: 302 GALYAWGGSQAGQLGLGPQT-------------RSFSLIPNESDTYFRNIPILVVPNGVQ 348
G +++WG + LGL P R S P++ L P+ V+
Sbjct: 350 GDVWSWGMEKG--LGLCPDASRAGTDSGDALSPRLMSCQPHQ----------LKFPDPVK 397
Query: 349 LVACGHSHTLVYMRDG-RIHGWGYNSYGQAANEKSTYAWYPSPVDW 393
VACG +HT++ R G R+ WG G + K + P+ V W
Sbjct: 398 -VACGAAHTVIVARKGYRMWSWGRGRSGVLGDGKGFDCYTPTAVLW 442
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 114/283 (40%), Gaps = 53/283 (18%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ V+ G H + L+ G + WG +G+LG G + L ++ GY +
Sbjct: 18 VVDVAAGEAHTLLLTGDGSVYCWGKGMFGRLGTGAEKDELLPVQLNFGYPN-PNGTEGTF 76
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQS-------GDKELLPRRVVALD 281
KI ++ G YHS A++E+G V+ WG GQLG +S GD L+PR +
Sbjct: 77 KIVGIAAGAYHSLALAEDGAVWCWGYNFYGQLGINGEESHDNEYAVGDNSLVPRILNKFL 136
Query: 282 GIFIKD-------------------VACGGVHSCALTSKGALYAWGG----SQAGQLGLG 318
+ D V GG+ S A+ + G L+ WG S+ G L L
Sbjct: 137 ELHPPDSSSSGVSEAESKTPLKICAVKAGGMMSLAIDNHGTLWMWGNCPRQSKEGGLAL- 195
Query: 319 PQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHG--------WG 370
SF+ P F+ + V VACG+ H + + G + WG
Sbjct: 196 --VSSFTPTPVWD---FQG-------HTVVKVACGNEHVVALVSAGETYNGEDLVCYSWG 243
Query: 371 YNSYGQAANEKSTYAWYPSPVDWCVGEV-RKLAAGGGHSAVLA 412
YNS GQ +P V E ++A G H+A+L
Sbjct: 244 YNSRGQLGLGDRESRLHPEVVRTFDEESPYEVACGAFHTALLT 286
>gi|330836214|ref|YP_004410855.1| chromosome condensation regulator RCC1 [Sphaerochaeta coccoides DSM
17374]
gi|329748117|gb|AEC01473.1| regulator of chromosome condensation RCC1 [Sphaerochaeta coccoides
DSM 17374]
Length = 743
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 162/381 (42%), Gaps = 58/381 (15%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV-----KQLQSEFVKSISC 121
++ G HT + +D TL+ G N GQLGDGT + R P V ++ VK +S
Sbjct: 361 VSVGDYHTMILKTDDTLWATGWNNVGQLGDGTTDDRSTPVPVWDSTDGSVKMTGVKEVSA 420
Query: 122 GAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQ---------- 171
G T + + DGT LW G NQ + +L G T Q
Sbjct: 421 GGSHTMIL----KKDGT-----LWATGDNQ---YGQLGDGTIITRTTPVQVKASTADNDF 468
Query: 172 ------VSCGSVHVVALSECGLLQAWGYNEYGQLGRGIT--CEGLQGPRVIKGYAKFLDE 223
VS G H + L + G L A G N+YGQLG G + P +K + D
Sbjct: 469 MTDVAAVSAGDYHTMILKKDGTLWATGDNQYGQLGDGTSGAVNNKSTPVRVKDTS---DG 525
Query: 224 APELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDG 282
+ + + V G H+ + NG ++ G GQLG + + + + P RV DG
Sbjct: 526 SGFMTDVAAVYAGTNHTMILKNNGTLWATGRNDFGQLGDGTTGTVNNKNTPVRVKDTTDG 585
Query: 283 I-FIKDVA---CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
F+ DVA GG H+ L G L+A G S G+LG+G D RN
Sbjct: 586 SGFMTDVAAVSAGGTHTMILKKDGTLWATGSSIDGKLGVG-------------DYNDRNT 632
Query: 339 PILVVPNG--VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG 396
P+ V G V V+ G HT++ ++G + G N YGQ ++ P PV
Sbjct: 633 PVQVSSMGSDVAAVSAGKYHTMIVKKNGTLWATGNNVYGQLGVGDNSNRNTPVPVSSMGS 692
Query: 397 EVRKLAAGGGHSAVLADACSL 417
+V ++A H+ +L + +L
Sbjct: 693 DVVAVSARERHTMILKNDGTL 713
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 146/336 (43%), Gaps = 54/336 (16%)
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK--QLQSEF---VKSIS 120
+++ G HT + DGTL+ G N++GQLGDGT R P +VK ++F V ++S
Sbjct: 417 EVSAGGSHTMILKKDGTLWATGDNQYGQLGDGTIITRTTPVQVKASTADNDFMTDVAAVS 476
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAF----TP----------- 165
G + T + + DGT LW G NQ GA TP
Sbjct: 477 AGDYHTMIL----KKDGT-----LWATGDNQYGQLGDGTSGAVNNKSTPVRVKDTSDGSG 527
Query: 166 -NTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGI--TCEGLQGPRVIKGYAKFLD 222
T + V G+ H + L G L A G N++GQLG G T P +K D
Sbjct: 528 FMTDVAAVYAGTNHTMILKNNGTLWATGRNDFGQLGDGTTGTVNNKNTPVRVK---DTTD 584
Query: 223 EAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG 282
+ + + VS G H+ + ++G ++ G G+LG + P +V ++ G
Sbjct: 585 GSGFMTDVAAVSAGGTHTMILKKDGTLWATGSSIDGKLGVGDYNDRNT---PVQVSSM-G 640
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
+ V+ G H+ + G L+A G + GQLG+G D RN P+ V
Sbjct: 641 SDVAAVSAGKYHTMIVKKNGTLWATGNNVYGQLGVG-------------DNSNRNTPVPV 687
Query: 343 VPNGVQLVACG--HSHTLVYMRDGRIHGWGYNSYGQ 376
G +VA HT++ DG + G G+N +GQ
Sbjct: 688 SSMGSDVVAVSARERHTMILKNDGTLWGTGHNVFGQ 723
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 95/230 (41%), Gaps = 40/230 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTE---EGRKHPEKVKQLQ--SEF---VKS 118
+ G HT + ++GTL+ G N+FGQLGDGT + P +VK S F V +
Sbjct: 535 VYAGTNHTMILKNNGTLWATGRNDFGQLGDGTTGTVNNKNTPVRVKDTTDGSGFMTDVAA 594
Query: 119 ISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAF----TPNTI------ 168
+S G T + + DGT LW G + +L G + TP +
Sbjct: 595 VSAGGTHTMIL----KKDGT-----LWATGSSIDG---KLGVGDYNDRNTPVQVSSMGSD 642
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ VS G H + + + G L A G N YGQLG G P +
Sbjct: 643 VAAVSAGKYHTMIVKKNGTLWATGNNVYGQLGVGDNSN-RNTPVPVSSMG---------S 692
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
+ VS E H+ + +G ++ G GQLG S + +P +V+
Sbjct: 693 DVVAVSARERHTMILKNDGTLWGTGHNVFGQLGLGVSGSEHSKRVPEQVI 742
>gi|380817670|gb|AFE80709.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
Length = 4829
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 178/412 (43%), Gaps = 69/412 (16%)
Query: 20 KSAIYVWGYNHSGQTG-RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
++ ++VWG N Q G KG + ++ P + N + +A G + AV
Sbjct: 2953 RTKVFVWGLNDKDQLGGLKGSKIKV-------PSFSETLSALNV--VQVAGGSKSLFAVT 3003
Query: 79 SDGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRE 134
+G ++ G G+LG G G P ++ L S VK ++ G H TA
Sbjct: 3004 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV---- 3059
Query: 135 NDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSE 184
DG +++ WG+ PRL T I ++CGS H AL+
Sbjct: 3060 -DG-----KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTS 3111
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGP--RVIKGYAKFLDEAPELEKITQVSCG--EYHS 240
G L WG EYG+LG G L+ +V+ G+ ++ QV+CG + +
Sbjct: 3112 SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-----------RVIQVACGSRDAQT 3160
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
A+++ G V++WG G G+LG + + +P+ + L+G + + CG S ALT
Sbjct: 3161 LALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTK 3217
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTL 358
G ++ WG +LG G SD + R ++ G ++V A G H L
Sbjct: 3218 SGVVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRGKKIVHVAVGALHCL 3265
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
G+++ WG N +GQ N +T P+ V G+ + ++A G HS
Sbjct: 3266 AVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3317
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3063 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 3114
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 3115 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 3167
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 3168 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3224
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV+++G+VY
Sbjct: 3225 GKGDYFRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDSGQVYA 3275
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3276 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3321
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 3002 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQI-----TALSSYVVKKVAVHSGGRHATA 3056
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+
Sbjct: 3057 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------ 3110
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 3111 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3164
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 3165 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 3215
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH S K P+ V L G I VA G +H A+T G
Sbjct: 3216 TKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDSGQ 3272
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 3273 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3319
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 144/327 (44%), Gaps = 50/327 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +D+A G H+A V + G
Sbjct: 4055 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRGIEV--VDVAAGGAHSACVTAAGD 4106
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG E + P+ V+ LQ V I+CG+ + +D T+
Sbjct: 4107 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC--LTDDDTV--- 4161
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 4162 --WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4219
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 4220 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4270
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G + VACG H+ AW S+
Sbjct: 4271 NDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAWSTSKPAS 4318
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPIL 341
G P + +P E + + + IPI+
Sbjct: 4319 AGKLP-----AQVPMEYN-HLQEIPII 4339
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 174/411 (42%), Gaps = 76/411 (18%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P C A A R + + G + AV +DG
Sbjct: 3949 IYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALATLRPVQLIGGEQTLFAVTADG 3999
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 4000 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE------- 4052
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG+ + PR+ + V+ G H ++ G L
Sbjct: 4053 ---GEVYSWGEAEDGKLGHGNRSPCDRPRVIES--LRGIEVVDVAAGGAHSACVTAAGDL 4107
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSEN 246
WG YG+LG + + L+ P+++ EA + ++ ++C G+ + ++++
Sbjct: 4108 YTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVVDIACGSGDAQTLCLTDD 4158
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4159 DTVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 4215
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTL 358
WG +LG G SD + R P VQ +A G H +
Sbjct: 4216 WGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCV 4257
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
DG ++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4258 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4308
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 129/276 (46%), Gaps = 25/276 (9%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N + P+L G + N + H +AL+ G + +WG + G+LG G
Sbjct: 471 RVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG 530
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P+VI ++ + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 531 DTVP-LEEPKVISAFSG----KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 585
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + E +P V L G+ + DVACG + A+T G +++WG G+LG G
Sbjct: 586 ---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 642
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D V V CG ++ +DG+++ WG +
Sbjct: 643 DGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 690
Query: 379 NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ + YP ++ G +V +AAG H L +
Sbjct: 691 HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 122/253 (48%), Gaps = 30/253 (11%)
Query: 134 ENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N +GS + + QV+ GS + A++
Sbjct: 2947 ESAATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3005
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + A G G+LG GI+ + PR I + ++ K V G H+ A++
Sbjct: 3006 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYV------VKKVAVHSGGRHATALTV 3059
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS ALTS G LY
Sbjct: 3060 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELY 3116
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRD 363
WG + G+LG G T + + +L+ +Q VACG + TL +
Sbjct: 3117 TWGLGEYGRLGHGDNTTQLKP---------KMVKVLLGHRVIQ-VACGSRDAQTLALTDE 3166
Query: 364 GRIHGWGYNSYGQ 376
G + WG +G+
Sbjct: 3167 GLVFSWGDGDFGK 3179
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 134/310 (43%), Gaps = 53/310 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHC 125
+ G +H A++S+G +++WG E G+LG G P ++ L+ E V + GAH
Sbjct: 4039 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4098
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCG 175
A L+ WG+ + P+L A + ++ ++CG
Sbjct: 4099 ACVTA----------AGDLYTWGKGRYGRLGHSDSEDQLKPKLV-EALQGHRVV-DIACG 4146
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + L++ + +WG +YG+LGRG +G + P I + +V
Sbjct: 4147 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVKV 4197
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G VYTWG G +LGH S D PR+V L G + +A G +
Sbjct: 4198 ECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSL 4254
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLV 350
H T G +Y WG + GQLG G T P LV V V
Sbjct: 4255 HCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRV 4301
Query: 351 ACGHSHTLVY 360
ACG +HTL +
Sbjct: 4302 ACGSAHTLAW 4311
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 45/285 (15%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+L A N + H A+A+ G +++WG + G+LG G + P+ +
Sbjct: 482 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVI 541
Query: 109 KQLQ----SEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT 164
+ V I+CG+ +AAI E L+ WG+ N+ RL G+
Sbjct: 542 SAFSGKQAGKHVVHIACGSTYSAAITAEGE---------LYTWGRG---NYGRLGHGSSE 589
Query: 165 PNTI-----------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
I + V+CGS +A++E G + +WG +YG+LGRG +G + P
Sbjct: 590 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTP 648
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
++I+ + +V CG S A++++G+VY+WG G +LGH G +E
Sbjct: 649 KLIEKLQDL--------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH-----GTEE 695
Query: 272 LL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ P+ + L G + DVA G H ALT +++WG + Q
Sbjct: 696 HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 136/293 (46%), Gaps = 33/293 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG G+ G G L PK + G AG + + IACG ++AA
Sbjct: 510 LAATGEVYSWGCGDGGRLGH-GDTVPLEEPKVIS-AFSGKQAGKHV--VHIACGSTYSAA 565
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E P V L+ V ++CG+ +A
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA------ 619
Query: 137 GTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
++W WG R G TP I + +V CGS +AL++ G +
Sbjct: 620 -VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQV 678
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG + +LG G T E ++ P++++G + +K+ V+ G H A++E+ E
Sbjct: 679 YSWGKGDNQRLGHG-TEEHVRYPKLLEGL--------QGKKVIDVAAGSTHCLALTEDSE 729
Query: 249 VYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
V++W GS Q H +L+ E P + LD I +ACG S A +S
Sbjct: 730 VHSW--GSNDQCQHFDTLRVTKPE--PAALPGLDTKHIVGIACGPAQSFAWSS 778
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 139/340 (40%), Gaps = 63/340 (18%)
Query: 56 CPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
C AN IAC + ++ +G ++T N P+ V+ L S
Sbjct: 445 CEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRN 494
Query: 116 VKSISCGA--HCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAF 163
+ I+ + H A+A +T ++ WG G P++ AF
Sbjct: 495 IVKIAAHSDGHHYLALA---------ATGEVYSWGCGDGGRLGHGDTVPLEEPKVI-SAF 544
Query: 164 TPNTI---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF 220
+ + ++CGS + A++ G L WG YG+LG G + E P ++ G
Sbjct: 545 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-SSEDEAIPMLVAGLKGL 603
Query: 221 LDEAPELEKITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
K+ V+CG + + AV+ENG+V++WG G G+LG D P+ +
Sbjct: 604 --------KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR---GGSDGCKTPKLIE 652
Query: 279 ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
L + + V CG S ALT G +Y+WG +LG G ++ + R
Sbjct: 653 KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG------------TEEHVRYP 700
Query: 339 PILVVPNGVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+L G ++ VA G +H L D +H WG N Q
Sbjct: 701 KLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 110/281 (39%), Gaps = 69/281 (24%)
Query: 186 GLLQAWGYNEYGQLGRGI---------TCEGLQGPRVIK--------------------G 216
G + WG+N GQLG GI CE L R ++ G
Sbjct: 3947 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4005
Query: 217 Y----------AKFLDEAPELEKITQ-------VSCGEYHSAAVSENGEVYTWGLGSVGQ 259
Y + + LE I V+ G H A+S GEVY+WG G+
Sbjct: 4006 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4065
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LGH + D+ PR + +L GI + DVA GG HS +T+ G LY WG + G+LG
Sbjct: 4066 LGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG--- 4119
Query: 320 QTRSFSLIPNESDTYFRNIPILVVP---NGVQLVAC--GHSHTLVYMRDGRIHGWGYNSY 374
SD+ + P LV + V +AC G + TL D + WG Y
Sbjct: 4120 ----------HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDY 4169
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADA 414
G+ S P +D G V K+ G S L +
Sbjct: 4170 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4210
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG + G G + +R P+Q+ + + IA G H DG
Sbjct: 4212 AVYTWGKGDYHRLGH-GSDDHVRRPRQVQ-------GLQGKKVIAIATGSLHCVCCTEDG 4263
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
++TWG N+ GQLGDGT + P V LQ + V ++CG+ T A
Sbjct: 4264 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4310
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 74/186 (39%), Gaps = 22/186 (11%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+TQ++C E +S NG VYT S L P+ V L I +A
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------------DTLAPQLVQGLASRNIVKIA 499
Query: 290 C--GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
G H AL + G +Y+WG G+LG G +P E V
Sbjct: 500 AHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPLEEPKVISAFSGKQAGKHV 553
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGG 406
+ACG +++ +G ++ WG +YG+ + S P V G +V +A G G
Sbjct: 554 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSG 613
Query: 407 HSAVLA 412
+ LA
Sbjct: 614 DAQTLA 619
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 82/218 (37%), Gaps = 62/218 (28%)
Query: 246 NGEVYTWGLGSVGQLG--------------------HCSLQSGDKELL------------ 273
+G +Y WG GQLG L G++ L
Sbjct: 3946 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4005
Query: 274 -----------------PRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWGGSQAGQ 314
P + ++ +FIK VA GG H AL+S+G +Y+WG ++ G+
Sbjct: 4006 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4065
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LG G RS P ++ R I ++ VA G +H+ G ++ WG Y
Sbjct: 4066 LGHG--NRSPCDRPRVIES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRY 4115
Query: 375 GQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
G+ + S P V+ G V +A G G + L
Sbjct: 4116 GRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTL 4153
>gi|348682416|gb|EGZ22232.1| hypothetical protein PHYSODRAFT_330063 [Phytophthora sojae]
Length = 2101
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 109/349 (31%), Positives = 153/349 (43%), Gaps = 64/349 (18%)
Query: 63 RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF------- 115
R + IACG+ HTA + D L+T+G E G+LG G +E P V S
Sbjct: 1744 RVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGNQEDCTEPVSVGYFTSLIEAEGVDV 1803
Query: 116 --VKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQ----NQGSNFPRLFWGAFTPNTII 169
V +SCG T A+ + G + WG+ G L+ T I
Sbjct: 1804 GGVVEVSCGREHTMAVTASGDLFG-------FGWGEAGRLGTGETGSSLYPTRVTDLQNI 1856
Query: 170 CQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK 229
V+CG H +AL+ G + A+G G+LG G + + P ++G + +
Sbjct: 1857 AAVACGREHTLALTRKGRVFAFGAGFGGRLGNGSETDE-ELPFAVQGLEDY--------R 1907
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVV------ALD 281
I + GE HS A+S G+V TWG GS G LGH GD++ L PRR+ A+D
Sbjct: 1908 IAAIDAGECHSCALSTEGDVLTWGFGSSGALGH-----GDRDNCLEPRRIEGPWTGNAID 1962
Query: 282 G--------IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQT--RSFSLIPNES 331
G + +ACG H+ A TS GALY WG + AGQL + T L P
Sbjct: 1963 GEENQASETSVVSAIACGSYHTLAATSDGALYGWGDAAAGQLSVEYITAPEMVVLTPQR- 2021
Query: 332 DTYFRNIPILVVP--NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
+ VP +G++ VACG + V G + WG + G A
Sbjct: 2022 ---------IRVPTNSGIRSVACGTFTSAVCTNQGHLFLWGSPAAGNGA 2061
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 112/255 (43%), Gaps = 36/255 (14%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ACG EHT A+ G +F +GA G+LG+G+E + P V+ L+ + +I G +
Sbjct: 1859 VACGREHTLALTRKGRVFAFGAGFGGRLGNGSETDEELPFAVQGLEDYRIAAIDAGECHS 1918
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNF--------PRLFWGAFTPNTI---------- 168
A++ +G + T W +G + PR G +T N I
Sbjct: 1919 CALS----TEGDVLT---WGFGSSGALGHGDRDNCLEPRRIEGPWTGNAIDGEENQASET 1971
Query: 169 --ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPE 226
+ ++CGS H +A + G L WG GQL + E + P ++ + + P
Sbjct: 1972 SVVSAIACGSYHTLAATSDGALYGWGDAAAGQL----SVEYITAPEMVVLTPQRI-RVPT 2026
Query: 227 LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
I V+CG + SA + G ++ WG + G L+ D + +R+ L
Sbjct: 2027 NSGIRSVACGTFTSAVCTNQGHLFLWGSPAAG--NGAPLEVDDARV--KRIGVLGEFEFS 2082
Query: 287 DVACGGVHSCALTSK 301
VACG H+ A+T K
Sbjct: 2083 QVACGAYHAVAITRK 2097
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 84/178 (47%), Gaps = 32/178 (17%)
Query: 227 LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
L ++ Q++CG H+A ++++ +YT+G G G+LGH G++E V G F
Sbjct: 1742 LRRVVQIACGYRHTALITDDRHLYTFGHGECGRLGH-----GNQEDCTEPVSV--GYFTS 1794
Query: 287 DV-------------ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDT 333
+ +CG H+ A+T+ G L+ +G +AG+LG G +T S SL P T
Sbjct: 1795 LIEAEGVDVGGVVEVSCGREHTMAVTASGDLFGFGWGEAGRLGTG-ETGS-SLYPTRV-T 1851
Query: 334 YFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
+NI VACG HTL R GR+ +G G+ N T P V
Sbjct: 1852 DLQNIAA---------VACGREHTLALTRKGRVFAFGAGFGGRLGNGSETDEELPFAV 1900
>gi|335296869|ref|XP_003357882.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Sus scrofa]
Length = 531
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 141/304 (46%), Gaps = 39/304 (12%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V + +F +G N LG G + P+K++ L + +KS+S G+ ++ D
Sbjct: 37 VTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLST---ED 93
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQV---SCGSVHVVALSECGL 187
G + + WG N G+ + N +I QV +CGS H +AL+ G
Sbjct: 94 GVV-----YAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGE 148
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWGYN GQ+G G T PR + ++++ ++CG+ S AV +NG
Sbjct: 149 VFAWGYNNCGQVGSGSTANQ-PTPRKVTN-------CLHIKRVVSIACGQTSSMAVLDNG 200
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
EVY WG GQLG L + +L P RV AL + + + CG H+ ALT +G LYAW
Sbjct: 201 EVYGWGYNGNGQLG---LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAW 257
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRI 366
G + GQLG G + S P + V++ AC +HT + G +
Sbjct: 258 GANTYGQLGTGNKNNLLS--PAHIMVEKERV--------VEIAACHSAHTSAAKTQGGHV 307
Query: 367 HGWG 370
+ WG
Sbjct: 308 YMWG 311
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 112/236 (47%), Gaps = 30/236 (12%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HV+ +E G++ AWG+N Y QLG G T +G+ +V ++++ +V+CG
Sbjct: 86 HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLL--------IKQVVEVACGS 137
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHSC 296
+HS A++ +GEV+ WG + GQ+G S + + PR+V L + +ACG S
Sbjct: 138 HHSMALAADGEVFAWGYNNCGQVGSGSTAN---QPTPRKVTNCLHIKRVVSIACGQTSSM 194
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG---VQLVACG 353
A+ G +Y WG + GQLGLG + P+ V V + CG
Sbjct: 195 AVLDNGEVYGWGYNGNGQLGLGNNGNQLT-------------PVRVAALHSVCVNQIVCG 241
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
++HTL +G ++ WG N+YGQ SP V + R + HSA
Sbjct: 242 YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLL--SPAHIMVEKERVVEIAACHSA 295
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 113/243 (46%), Gaps = 37/243 (15%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG+N Q G G Q P Q+ C + +++ACG H+ A+A+DG
Sbjct: 95 VVYAWGHNGYSQLGN-GTTNQGIAPIQV------CTNLLIKQVVEVACGSHHSMALAADG 147
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+F WG N GQ+G G+ + P KV L + V SI+CG + A+ + E G
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYG--- 204
Query: 141 TSRLWVWGQN------QGSNFPRLFWGAFTPNTIIC--QVSCGSVHVVALSECGLLQAWG 192
WG N G+N +L +C Q+ CG H +AL++ GLL AWG
Sbjct: 205 ------WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G L ++ E E++ ++ +C H SAA ++ G VY
Sbjct: 259 ANTYGQLGTGNKNNLLSPAHIM----------VEKERVVEIAACHSAHTSAAKTQGGHVY 308
Query: 251 TWG 253
WG
Sbjct: 309 MWG 311
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 139/334 (41%), Gaps = 46/334 (13%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G +A + ++V+G N+S G G + +PK+L G + L
Sbjct: 26 VFGTSANEALYVTDNDEVFVFGLNYSNCLG-TGDNQSTLVPKKLEA-----LCGKKIKSL 79
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV-KQLQSEFVKSISCGAH 124
G H DG ++ WG N + QLG+GT P +V L + V ++CG+H
Sbjct: 80 SYGSG-PHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSH 138
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQ------GSN----FPRLFWGAFTPNTIICQVSC 174
+ A+A E ++ WG N GS PR ++ ++C
Sbjct: 139 HSMALAADGE---------VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVV-SIAC 188
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G +A+ + G + WGYN GQLG G L RV A + Q+
Sbjct: 189 GQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRV---------AALHSVCVNQIV 239
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGG 292
CG H+ A+++ G +Y WG + GQLG +G+K L P ++ ++ AC
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLG-----TGNKNNLLSPAHIMVEKERVVEIAACHS 294
Query: 293 VH-SCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
H S A T G +Y WG + + L P FS
Sbjct: 295 AHTSAAKTQGGHVYMWGQCRGQSVTL-PHLTHFS 327
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 85/173 (49%), Gaps = 17/173 (9%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHSCALT 299
V++N EV+ +GL LG +GD + L+P+++ AL G IK ++ G G H T
Sbjct: 37 VTDNDEVFVFGLNYSNCLG-----TGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLST 91
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
G +YAWG + QLG G + + I ++ L++ V+ VACG H++
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTN--------LLIKQVVE-VACGSHHSMA 142
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
DG + WGYN+ GQ + + P V C+ R ++ G ++ +A
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMA 195
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 20/151 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WGYN +GQ G QL P ++ C I CG+ HT A+ +G
Sbjct: 202 VYGWGYNGNGQLGLGNNGNQLT-PVRVAALHSVCVN-------QIVCGYAHTLALTDEGL 253
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
L+ WGAN +GQLG G + P + + V+ +C AH +AA +
Sbjct: 254 LYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQG--------- 304
Query: 142 SRLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 305 GHVYMWGQCRGQSVTLPHLTHFSSTDDVFAC 335
>gi|428170458|gb|EKX39383.1| hypothetical protein GUITHDRAFT_89130 [Guillardia theta CCMP2712]
Length = 396
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 109/351 (31%), Positives = 155/351 (44%), Gaps = 36/351 (10%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WGYN S QTG + P+ + A + + IA G +H+ A+
Sbjct: 59 VYSWGYNDSRQTGHGVEDLSDWEPRWIR-------ALETVKVVQIAAGEDHSVALTDRSE 111
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE--NDGTIS 140
+FTWG GQLG G P VK LQ + +KSI CG T AI + G+ +
Sbjct: 112 VFTWGRGLHGQLGHGDVSDVWFPFLVKGLQGKGIKSIGCGYENTFAITGTGKVLGFGSAA 171
Query: 141 TSRLW---VWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
+ +L V G G+ + + + TII Q + G + LS G L + GY G
Sbjct: 172 SGKLGNGDVDGGIGGNVYLPVQLKSLAKFTII-QATGGKNFSMFLSHTGQLYSVGYAANG 230
Query: 198 QLGRGI-TCEGLQGPRVIKGYAKFLDEAPELEKITQ-VSCGEYHSAAVSENGEVYTWGLG 255
QLG E L P Y + E + VSCG+ HS A+SE+G VY+WG G
Sbjct: 231 QLGIPFEEVESLNLP-----YTGTMQEVSHKGVFVKYVSCGDSHSLALSEDGIVYSWGSG 285
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
LGH + P+ V L+ V+ GG HS A+++ G +Y WG + GQL
Sbjct: 286 INWALGHGGTE---DTFTPKMVAMLEADPCVSVSAGGYHSAAVSATGRIYTWGRNFVGQL 342
Query: 316 GLGPQTRSFSLIPNESDTYFRNIPILVVPNG-------VQLVACGHSHTLV 359
G G I + S + + +P V+ G V CG HT++
Sbjct: 343 GTGQN------IDDHSADHVQRLPTRVILKGSVDSSEMAMRVGCGQCHTIL 387
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 141/327 (43%), Gaps = 45/327 (13%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRK-HPEKVKQLQSEFVKSISCGAHC 125
+ACG +H ++ G +++WG N+ Q G G E+ P ++ L++ V I+ G
Sbjct: 43 LACGGKHNLLLSRAGKVYSWGYNDSRQTGHGVEDLSDWEPRWIRALETVKVVQIAAGEDH 102
Query: 126 TAAIAEPRENDGTISTSRLWVWGQ----NQGSNFPRLFWGAFTPNTI----ICQVSCGSV 177
+ A+ + E ++ WG+ G W F + I + CG
Sbjct: 103 SVALTDRSE---------VFTWGRGLHGQLGHGDVSDVWFPFLVKGLQGKGIKSIGCGYE 153
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQG----PRVIKGYAKFLDEAPELEKITQV 233
+ A++ G + +G G+LG G G+ G P +K AKF I Q
Sbjct: 154 NTFAITGTGKVLGFGSAASGKLGNGDVDGGIGGNVYLPVQLKSLAKF--------TIIQA 205
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLP----RRVVALDGIFIKDVA 289
+ G+ S +S G++Y+ G + GQLG + + LP + V+ G+F+K V+
Sbjct: 206 TGGKNFSMFLSHTGQLYSVGYAANGQLG-IPFEEVESLNLPYTGTMQEVSHKGVFVKYVS 264
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
CG HS AL+ G +Y+WG LG G DT+ + ++ +
Sbjct: 265 CGDSHSLALSEDGIVYSWGSGINWALGHG----------GTEDTFTPKMVAMLEADPCVS 314
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
V+ G H+ GRI+ WG N GQ
Sbjct: 315 VSAGGYHSAAVSATGRIYTWGRNFVGQ 341
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 122/302 (40%), Gaps = 73/302 (24%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ ++CG H + LS G + +WGYN+ Q G G+ PR I+ A E
Sbjct: 40 VKSLACGGKHNLLLSRAGKVYSWGYNDSRQTGHGVEDLSDWEPRWIR--------ALETV 91
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
K+ Q++ GE HS A+++ EV+TWG G GQLGH + P V L G IK +
Sbjct: 92 KVVQIAAGEDHSVALTDRSEVFTWGRGLHGQLGHGDVS---DVWFPFLVKGLQGKGIKSI 148
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGP-------------QTRSFSLIPNESDTYF 335
CG ++ A+T G + +G + +G+LG G Q +S + T
Sbjct: 149 GCGYENTFAITGTGKVLGFGSAASGKLGNGDVDGGIGGNVYLPVQLKSLAKFTIIQATGG 208
Query: 336 RNIPILVVPNG----------------------------------------VQLVACGHS 355
+N + + G V+ V+CG S
Sbjct: 209 KNFSMFLSHTGQLYSVGYAANGQLGIPFEEVESLNLPYTGTMQEVSHKGVFVKYVSCGDS 268
Query: 356 HTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV-----DWCVGEVRKLAAGGGHSAV 410
H+L DG ++ WG + + + P V D CV ++AGG HSA
Sbjct: 269 HSLALSEDGIVYSWGSGINWALGHGGTEDTFTPKMVAMLEADPCV----SVSAGGYHSAA 324
Query: 411 LA 412
++
Sbjct: 325 VS 326
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 13/173 (7%)
Query: 207 GLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQ 266
GL R + L ++E + ++CG H+ +S G+VY+WG Q GH
Sbjct: 18 GLNDERARTAFTGPLGTLQDVE-VKSLACGGKHNLLLSRAGKVYSWGYNDSRQTGHGVED 76
Query: 267 SGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSL 326
D E PR + AL+ + + +A G HS ALT + ++ WG GQLG G
Sbjct: 77 LSDWE--PRWIRALETVKVVQIAAGEDHSVALTDRSEVFTWGRGLHGQLGHG-------- 126
Query: 327 IPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAAN 379
+ SD +F + + G++ + CG+ +T G++ G+G + G+ N
Sbjct: 127 --DVSDVWFPFLVKGLQGKGIKSIGCGYENTFAITGTGKVLGFGSAASGKLGN 177
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 11/143 (7%)
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
VY+ G G+ G+LG ++ + + L + +K +ACGG H+ L+ G +Y+WG
Sbjct: 6 VYSCGHGAGGRLGLNDERA--RTAFTGPLGTLQDVEVKSLACGGKHNLLLSRAGKVYSWG 63
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHG 368
+ + Q G G + + SD R I L VQ +A G H++ +
Sbjct: 64 YNDSRQTGHG--------VEDLSDWEPRWIRALETVKVVQ-IAAGEDHSVALTDRSEVFT 114
Query: 369 WGYNSYGQAANEKSTYAWYPSPV 391
WG +GQ + + W+P V
Sbjct: 115 WGRGLHGQLGHGDVSDVWFPFLV 137
>gi|426344976|ref|XP_004039179.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Gorilla gorilla gorilla]
Length = 1016
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/258 (34%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I Q++CG H +ALS+ G L AWG N +GQLG G P++++ A
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGV-------- 191
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
+ Q+S GE HS A+S +G +Y+WG GQLG +S D P + LD ++ V
Sbjct: 192 PLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKD---YPSLIEGLDNQKVEFV 248
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV---VPN 345
ACGG HS LT G L+ +G + GQLG N + R P LV V
Sbjct: 249 ACGGSHSALLTQDGLLFTFGAGKHGQLG-----------HNSTQNELR--PCLVAELVGY 295
Query: 346 GVQLVACGHSHTLVYMRD-GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL--- 401
V +ACG HTL Y+ D G++ +G GQ N + P PV E KL
Sbjct: 296 RVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESH 355
Query: 402 --------AAGGGHSAVL 411
AGG S +L
Sbjct: 356 TSEKELIMIAGGNQSILL 373
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 121/259 (46%), Gaps = 46/259 (17%)
Query: 161 GAFTP-------NTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV 213
GA TP N I V G+ H++ LS G + + Y+ Y + + L+ V
Sbjct: 84 GARTPKCIKLGKNMKIHSVDQGAEHMLILSSDG--KPFEYDNY-------SMKHLRFENV 134
Query: 214 IKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL 273
++ +KI Q++CG+YHS A+S+ GE++ WG GQLG +
Sbjct: 135 LQE-----------KKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG--RKFPSTTT 181
Query: 274 PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDT 333
P+ V L G+ + ++ G HS AL+ G +Y+WG ++ GQLGLG ES
Sbjct: 182 PQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLG---------HTESKD 232
Query: 334 YFRNIPILVV---PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSP 390
Y P L+ V+ VACG SH+ + +DG + +G +GQ + + P
Sbjct: 233 Y----PSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCL 288
Query: 391 VDWCVG-EVRKLAAGGGHS 408
V VG V ++A G H+
Sbjct: 289 VAELVGYRVTQIACGRWHT 307
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 36/215 (16%)
Query: 62 SRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSIS 120
+ + I CG H+ A++ G LF WG N GQLG G + P+ V+ L + IS
Sbjct: 138 KKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQIS 197
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQN----------QGSNFPRLFWGAFTPNTIIC 170
G + A++ + ++ WG+N + ++P L G N +
Sbjct: 198 AGEAHSMALS---------MSGNIYSWGKNEFGQLGLGHTESKDYPSLIEG--LDNQKVE 246
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV--IKGYAKFLDEAPELE 228
V+CG H L++ GLL +G ++GQLG T L+ V + GY
Sbjct: 247 FVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGY----------- 295
Query: 229 KITQVSCGEYHSAA-VSENGEVYTWGLGSVGQLGH 262
++TQ++CG +H+ A VS+ G+V+++G G GQLG+
Sbjct: 296 RVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGN 330
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 93/191 (48%), Gaps = 15/191 (7%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G GR+ Q+ L G P I+ G H+ A++ G
Sbjct: 159 LFAWGQNLHGQLGV-GRKFPSTTTPQIVEHLAGVPLA------QISAGEAHSMALSMSGN 211
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST- 141
+++WG NEFGQLG G E + +P ++ L ++ V+ ++CG +A + + DG + T
Sbjct: 212 IYSWGKNEFGQLGLGHTESKDYPSLIEGLDNQKVEFVACGGSHSALLTQ----DGLLFTF 267
Query: 142 --SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYNEYGQ 198
+ G N N R A + Q++CG H +A +S+ G + ++G + GQ
Sbjct: 268 GAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQ 327
Query: 199 LGRGITCEGLQ 209
LG G T + L
Sbjct: 328 LGNGGTRDQLM 338
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 59/136 (43%), Gaps = 14/136 (10%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD-G 81
++ +G GQ G + +LR L EL G R IACG HT A SD G
Sbjct: 264 LFTFGAGKHGQLGHNSTQNELR--PCLVAELVG------YRVTQIACGRWHTLAYVSDLG 315
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F++G+ + GQLG+G + P VK SE +K S + + G +
Sbjct: 316 KVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIA-----GGNQS 370
Query: 142 SRLWVWGQNQGSNFPR 157
LW+ +N N R
Sbjct: 371 ILLWIKKENSYVNLKR 386
>gi|402873774|ref|XP_003919728.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
[Papio anubis]
Length = 4123
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 178/412 (43%), Gaps = 69/412 (16%)
Query: 20 KSAIYVWGYNHSGQTG-RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
++ ++VWG N Q G KG + ++ P + N + +A G + AV
Sbjct: 2247 RTKVFVWGLNDKDQLGGLKGSKIKV-------PSFSETLSALNV--VQVAGGSKSLFAVT 2297
Query: 79 SDGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRE 134
+G ++ G G+LG G G P ++ L S VK ++ G H TA
Sbjct: 2298 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV---- 2353
Query: 135 NDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSE 184
DG +++ WG+ PRL T I ++CGS H AL+
Sbjct: 2354 -DG-----KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTS 2405
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGP--RVIKGYAKFLDEAPELEKITQVSCG--EYHS 240
G L WG EYG+LG G L+ +V+ G+ ++ QV+CG + +
Sbjct: 2406 SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-----------RVIQVACGSRDAQT 2454
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
A+++ G V++WG G G+LG + + +P+ + L+G + + CG S ALT
Sbjct: 2455 LALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTK 2511
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTL 358
G ++ WG +LG G SD + R ++ G ++V A G H L
Sbjct: 2512 SGVVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRGKKIVHVAVGALHCL 2559
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
G+++ WG N +GQ N +T P+ V G+ + ++A G HS
Sbjct: 2560 AVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 2611
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 2357 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 2408
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 2409 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 2461
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 2462 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 2518
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV+++G+VY
Sbjct: 2519 GKGDYFRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDSGQVYA 2569
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 2570 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 2615
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 2296 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQI-----TALSSYVVKKVAVHSGGRHATA 2350
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+
Sbjct: 2351 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------ 2404
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 2405 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 2458
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 2459 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 2509
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH S K P+ V L G I VA G +H A+T G
Sbjct: 2510 TKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDSGQ 2566
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 2567 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 2613
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 144/327 (44%), Gaps = 50/327 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +D+A G H+A V + G
Sbjct: 3349 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRGIEV--VDVAAGGAHSACVTAAGD 3400
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG E + P+ V+ LQ V I+CG+ + +D T+
Sbjct: 3401 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC--LTDDDTV--- 3455
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 3456 --WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 3513
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 3514 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 3564
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G + VACG H+ AW S+
Sbjct: 3565 NDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAWSTSKPAS 3612
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPIL 341
G P + +P E + + + IPI+
Sbjct: 3613 AGKLP-----AQVPMEYN-HLQEIPII 3633
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 174/411 (42%), Gaps = 76/411 (18%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P C A A R + + G + AV +DG
Sbjct: 3243 IYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALATLRPVQLIGGEQTLFAVTADG 3293
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 3294 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE------- 3346
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG+ + PR+ + V+ G H ++ G L
Sbjct: 3347 ---GEVYSWGEAEDGKLGHGNRSPCDRPRVIES--LRGIEVVDVAAGGAHSACVTAAGDL 3401
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSEN 246
WG YG+LG + + L+ P+++ EA + ++ ++C G+ + ++++
Sbjct: 3402 YTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVVDIACGSGDAQTLCLTDD 3452
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 3453 DTVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 3509
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTL 358
WG +LG G SD + R P VQ +A G H +
Sbjct: 3510 WGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCV 3551
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
DG ++ WG N GQ + + P V G +V ++A G H+
Sbjct: 3552 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 3602
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 124/253 (49%), Gaps = 30/253 (11%)
Query: 134 ENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N +GS + + QV+ GS + A++
Sbjct: 2241 ESAATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2299
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + A G G+LG GI+ + PR I + ++ K V G H+ A++
Sbjct: 2300 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYV------VKKVAVHSGGRHATALTV 2353
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS ALTS G LY
Sbjct: 2354 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELY 2410
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRD 363
WG + G+LG G T L P + + +L+ +Q VACG + TL +
Sbjct: 2411 TWGLGEYGRLGHGDNTT--QLKP-------KMVKVLLGHRVIQ-VACGSRDAQTLALTDE 2460
Query: 364 GRIHGWGYNSYGQ 376
G + WG +G+
Sbjct: 2461 GLVFSWGDGDFGK 2473
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 134/310 (43%), Gaps = 53/310 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHC 125
+ G +H A++S+G +++WG E G+LG G P ++ L+ E V + GAH
Sbjct: 3333 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 3392
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCG 175
A L+ WG+ + P+L A + ++ ++CG
Sbjct: 3393 ACVTA----------AGDLYTWGKGRYGRLGHSDSEDQLKPKLV-EALQGHRVV-DIACG 3440
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + L++ + +WG +YG+LGRG +G + P I + +V
Sbjct: 3441 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVKV 3491
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G VYTWG G +LGH S D PR+V L G + +A G +
Sbjct: 3492 ECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSL 3548
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLV 350
H T G +Y WG + GQLG G T P LV V V
Sbjct: 3549 HCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRV 3595
Query: 351 ACGHSHTLVY 360
ACG +HTL +
Sbjct: 3596 ACGSAHTLAW 3605
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 110/281 (39%), Gaps = 69/281 (24%)
Query: 186 GLLQAWGYNEYGQLGRGI---------TCEGLQGPRVIK--------------------G 216
G + WG+N GQLG GI CE L R ++ G
Sbjct: 3241 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3299
Query: 217 Y----------AKFLDEAPELEKITQ-------VSCGEYHSAAVSENGEVYTWGLGSVGQ 259
Y + + LE I V+ G H A+S GEVY+WG G+
Sbjct: 3300 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3359
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LGH + D+ PR + +L GI + DVA GG HS +T+ G LY WG + G+LG
Sbjct: 3360 LGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG--- 3413
Query: 320 QTRSFSLIPNESDTYFRNIPILVVP---NGVQLVAC--GHSHTLVYMRDGRIHGWGYNSY 374
SD+ + P LV + V +AC G + TL D + WG Y
Sbjct: 3414 ----------HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDY 3463
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADA 414
G+ S P +D G V K+ G S L +
Sbjct: 3464 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 3504
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG + G G + +R P+Q+ + + IA G H DG
Sbjct: 3506 AVYTWGKGDYHRLGH-GSDDHVRRPRQVQ-------GLQGKKVIAIATGSLHCVCCTEDG 3557
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
++TWG N+ GQLGDGT + P V LQ + V ++CG+ T A
Sbjct: 3558 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 3604
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 82/218 (37%), Gaps = 62/218 (28%)
Query: 246 NGEVYTWGLGSVGQLG--------------------HCSLQSGDKELL------------ 273
+G +Y WG GQLG L G++ L
Sbjct: 3240 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3299
Query: 274 -----------------PRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWGGSQAGQ 314
P + ++ +FIK VA GG H AL+S+G +Y+WG ++ G+
Sbjct: 3300 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3359
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LG G RS P ++ R I ++ VA G +H+ G ++ WG Y
Sbjct: 3360 LGHG--NRSPCDRPRVIES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRY 3409
Query: 375 GQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
G+ + S P V+ G V +A G G + L
Sbjct: 3410 GRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTL 3447
>gi|410048912|ref|XP_003952667.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Pan troglodytes]
Length = 4776
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 176/411 (42%), Gaps = 67/411 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
++ ++VWG N Q G L+ K P + N + +A G + AV
Sbjct: 2951 RTKVFVWGLNDKDQLG------GLKGSKIKVPSFSETLSALNV--VQVAGGSKSLFAVTV 3002
Query: 80 DGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPREN 135
+G ++ G G+LG G G P ++ L S VK ++ G H TA
Sbjct: 3003 EGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV----- 3057
Query: 136 DGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
DG +++ WG+ PRL T I ++CGS H AL+
Sbjct: 3058 DG-----KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSS 3110
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGP--RVIKGYAKFLDEAPELEKITQVSCG--EYHSA 241
G L WG EYG+LG G L+ +V+ G+ ++ QV+CG + +
Sbjct: 3111 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-----------RVIQVACGSRDAQTL 3159
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A+++ G V++WG G G+LG + + +P+ + L+G + + CG S ALT
Sbjct: 3160 ALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTKS 3216
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLV 359
G ++ WG +LG G SD + R ++ G ++V A G H L
Sbjct: 3217 GVVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3264
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
G+++ WG N +GQ N +T P+ V G+ + ++A G HS
Sbjct: 3265 VTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3315
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3061 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 3112
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 3113 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 3165
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 3166 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3222
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV+++G+VY
Sbjct: 3223 GKGDYFRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDSGQVYA 3273
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3274 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3319
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 3000 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQI-----TALSSYVVKKVAVHSGGRHATA 3054
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+
Sbjct: 3055 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------ 3108
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 3109 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3162
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 3163 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 3213
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH S K P+ V L G I VA G +H A+T G
Sbjct: 3214 TKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDSGQ 3270
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 3271 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3317
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 144/327 (44%), Gaps = 50/327 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +D+A G H+A V + G
Sbjct: 4002 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRGIEV--VDVAAGGAHSACVTAAGD 4053
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG E + P+ V+ LQ V I+CG+ + +D T+
Sbjct: 4054 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC--LTDDDTV--- 4108
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 4109 --WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4166
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 4167 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4217
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G + VACG H+ AW S+
Sbjct: 4218 NDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAWSTSKPAS 4265
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPIL 341
G P + +P E + + + IPI+
Sbjct: 4266 AGKLP-----AQVPMEYN-HLQEIPII 4286
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 129/276 (46%), Gaps = 25/276 (9%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N + P+L G + N + H +AL+ G + +WG + G+LG G
Sbjct: 471 RVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG 530
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P+VI ++ + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 531 DTVP-LEEPKVISAFSG----KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 585
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + E +P V L G+ + DVACG + A+T G +++WG G+LG G
Sbjct: 586 ---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 642
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D V V CG ++ +DG+++ WG +
Sbjct: 643 DGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 690
Query: 379 NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ + YP ++ G +V +AAG H L +
Sbjct: 691 HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 124/253 (49%), Gaps = 30/253 (11%)
Query: 134 ENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N +GS + + QV+ GS + A++
Sbjct: 2945 ESAATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3003
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + A G G+LG GI+ + PR I + ++ K V G H+ A++
Sbjct: 3004 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYV------VKKVAVHSGGRHATALTV 3057
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS ALTS G LY
Sbjct: 3058 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELY 3114
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRD 363
WG + G+LG G T L P + + +L+ +Q VACG + TL +
Sbjct: 3115 TWGLGEYGRLGHGDNTT--QLKP-------KMVKVLLGHRVIQ-VACGSRDAQTLALTDE 3164
Query: 364 GRIHGWGYNSYGQ 376
G + WG +G+
Sbjct: 3165 GLVFSWGDGDFGK 3177
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 134/310 (43%), Gaps = 53/310 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHC 125
+ G +H A++S+G +++WG E G+LG G P ++ L+ E V + GAH
Sbjct: 3986 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4045
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCG 175
A L+ WG+ + P+L A + ++ ++CG
Sbjct: 4046 ACVTA----------AGDLYTWGKGRYGRLGHSDSEDQLKPKLV-EALQGHRVV-DIACG 4093
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + L++ + +WG +YG+LGRG +G + P I + +V
Sbjct: 4094 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVKV 4144
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G VYTWG G +LGH S D PR+V L G + +A G +
Sbjct: 4145 ECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSL 4201
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLV 350
H T G +Y WG + GQLG G T P LV V V
Sbjct: 4202 HCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRV 4248
Query: 351 ACGHSHTLVY 360
ACG +HTL +
Sbjct: 4249 ACGSAHTLAW 4258
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 45/285 (15%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+L A N + H A+A+ G +++WG + G+LG G + P+ +
Sbjct: 482 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVI 541
Query: 109 KQLQ----SEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT 164
+ V I+CG+ +AAI E L+ WG+ N+ RL G+
Sbjct: 542 SAFSGKQAGKHVVHIACGSTYSAAITAEGE---------LYTWGRG---NYGRLGHGSSE 589
Query: 165 PNTI-----------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
I + V+CGS +A++E G + +WG +YG+LGRG +G + P
Sbjct: 590 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTP 648
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
++I+ + +V CG S A++++G+VY+WG G +LGH G +E
Sbjct: 649 KLIEKLQDL--------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH-----GTEE 695
Query: 272 LL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ P+ + L G + DVA G H ALT +++WG + Q
Sbjct: 696 HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 136/293 (46%), Gaps = 33/293 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG G+ G G L PK + G AG + + IACG ++AA
Sbjct: 510 LAATGEVYSWGCGDGGRLGH-GDTVPLEEPKVIS-AFSGKQAGKHV--VHIACGSTYSAA 565
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E P V L+ V ++CG+ +A
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA------ 619
Query: 137 GTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
++W WG R G TP I + +V CGS +AL++ G +
Sbjct: 620 -VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQV 678
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG + +LG G T E ++ P++++G + +K+ V+ G H A++E+ E
Sbjct: 679 YSWGKGDNQRLGHG-TEEHVRYPKLLEGL--------QGKKVIDVAAGSTHCLALTEDSE 729
Query: 249 VYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
V++W GS Q H +L+ E P + LD I +ACG S A +S
Sbjct: 730 VHSW--GSNDQCQHFDTLRVTKPE--PAALPGLDTKHIVGIACGPAQSFAWSS 778
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 139/340 (40%), Gaps = 63/340 (18%)
Query: 56 CPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
C AN IAC + ++ +G ++T N P+ V+ L S
Sbjct: 445 CEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRN 494
Query: 116 VKSISCGA--HCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAF 163
+ I+ + H A+A +T ++ WG G P++ AF
Sbjct: 495 IVKIAAHSDGHHYLALA---------ATGEVYSWGCGDGGRLGHGDTVPLEEPKVI-SAF 544
Query: 164 TPNTI---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF 220
+ + ++CGS + A++ G L WG YG+LG G + E P ++ G
Sbjct: 545 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-SSEDEAIPMLVAGLKGL 603
Query: 221 LDEAPELEKITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
K+ V+CG + + AV+ENG+V++WG G G+LG D P+ +
Sbjct: 604 --------KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR---GGSDGCKTPKLIE 652
Query: 279 ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
L + + V CG S ALT G +Y+WG +LG G ++ + R
Sbjct: 653 KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG------------TEEHVRYP 700
Query: 339 PILVVPNGVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+L G ++ VA G +H L D +H WG N Q
Sbjct: 701 KLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 107/239 (44%), Gaps = 25/239 (10%)
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
V+ G H +ALS G + +WG E G+LG G PRVI+ ++
Sbjct: 3986 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGI--------EVV 4036
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
V+ G HSA V+ G++YTWG G G+LGH + +L P+ V AL G + D+ACG
Sbjct: 4037 DVAAGGAHSACVTAAGDLYTWGKGRYGRLGH---SDSEDQLKPKLVEALQGHRVVDIACG 4093
Query: 292 G--VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
+ LT +++WG G+LG G +P + D+ + GV
Sbjct: 4094 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG--GSDGCKVPMKIDS--------LTGLGVVK 4143
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGH 407
V CG ++ + G ++ WG Y + + + P V G +V +A G H
Sbjct: 4144 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4202
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 136/333 (40%), Gaps = 66/333 (19%)
Query: 100 EGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNF- 155
E P ++ +Q F+K ++ G HC A +E ++ WG+ +
Sbjct: 3965 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE----------GEVYSWGEAEDGKLG 4014
Query: 156 ---------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCE 206
PR+ + V+ G H ++ G L WG YG+LG + +
Sbjct: 4015 HGNRSPCDRPRVIES--LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4072
Query: 207 GLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCS 264
L+ P+++ EA + ++ ++CG + + ++++ V++WG G G+LG
Sbjct: 4073 QLK-PKLV--------EALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR-- 4121
Query: 265 LQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSF 324
D +P ++ +L G+ + V CG S ALT GA+Y WG +LG G
Sbjct: 4122 -GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG------ 4174
Query: 325 SLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
SD + R P VQ +A G H + DG ++ WG N GQ
Sbjct: 4175 ------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4222
Query: 377 AANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
+ + P V G +V ++A G H+
Sbjct: 4223 LGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4255
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG + G G + +R P+Q+ + + IA G H DG
Sbjct: 4159 AVYTWGKGDYHRLGH-GSDDHVRRPRQVQ-------GLQGKKVIAIATGSLHCVCCTEDG 4210
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
++TWG N+ GQLGDGT + P V LQ + V ++CG+ T A
Sbjct: 4211 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4257
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 74/186 (39%), Gaps = 22/186 (11%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+TQ++C E +S NG VYT S L P+ V L I +A
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------------DTLAPQLVQGLASRNIVKIA 499
Query: 290 C--GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
G H AL + G +Y+WG G+LG G +P E V
Sbjct: 500 AHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPLEEPKVISAFSGKQAGKHV 553
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGG 406
+ACG +++ +G ++ WG +YG+ + S P V G +V +A G G
Sbjct: 554 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSG 613
Query: 407 HSAVLA 412
+ LA
Sbjct: 614 DAQTLA 619
>gi|395848168|ref|XP_003796731.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Otolemur
garnettii]
Length = 551
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 115/233 (49%), Gaps = 24/233 (10%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HVV + G + WG+N Y QLG G T GL + + +++ +V+CG
Sbjct: 110 HVVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN--------KQVIEVACGS 161
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHSC 296
YHS ++ +GEV+ WG + GQ+G S + + +PRRV L I +ACG + S
Sbjct: 162 YHSLVLTSDGEVFAWGYNNSGQVGSGSTAN---QPIPRRVTGCLQNKVIVTIACGQMCSM 218
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G ++ WG + GQLGLG + + R VQ VACG++H
Sbjct: 219 AVVDTGEVFVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR----------VQRVACGYAH 268
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
TLV +G+++ WG NSYGQ + YP+PV V + R + HSA
Sbjct: 269 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPV--VVEKDRVIEIAACHSA 319
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 133/300 (44%), Gaps = 43/300 (14%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTAAIAEPRENDGTIS 140
+F G N G LG G + P K+ L + + +S G+ H A E
Sbjct: 67 IFVLGTNCCGCLGLGDIQSTIEPRKLDSLSGKKIACLSYGSGPHVVLATTE--------- 117
Query: 141 TSRLWVWGQNQGSNFPR---------LFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
++ WG N S N + +V+CGS H + L+ G + AW
Sbjct: 118 -GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAW 176
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
GYN GQ+G G T PR + G + + I ++CG+ S AV + GEV+
Sbjct: 177 GYNNSGQVGSGSTANQ-PIPRRVTG-------CLQNKVIVTIACGQMCSMAVVDTGEVFV 228
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG GQLG L S + P R+ AL GI ++ VACG H+ LT +G +YAWG +
Sbjct: 229 WGYNGNGQLG---LGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 285
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRIHGWG 370
GQLG G N+S+ + ++ +++ AC +HT + G ++ WG
Sbjct: 286 YGQLGTG----------NKSNQSYPTPVVVEKDRVIEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 115/243 (47%), Gaps = 39/243 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G +P + L +N + +++ACG H+ + SDG
Sbjct: 120 VFTWGHNAYSQLG-NGTTNHGLVPCHISTNL------SNKQVIEVACGSYHSLVLTSDGE 172
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P +V LQ++ + +I+CG C+ A+ + T
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVIVTIACGQMCSMAV---------VDT 223
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N N P A + +V+CG H + L++ G + AWG
Sbjct: 224 GEVFVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 283
Query: 194 NEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G + + P V+ E +++ ++ +C H SAA ++ G VY
Sbjct: 284 NSYGQLGTGNKSNQSYPTPVVV-----------EKDRVIEIAACHSAHTSAAKTQGGHVY 332
Query: 251 TWG 253
WG
Sbjct: 333 MWG 335
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 68/151 (45%), Gaps = 20/151 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++VWGYN +GQ G Q P A R +ACG+ HT + +G
Sbjct: 226 VFVWGYNGNGQLGLGSSGNQ--------PTPCRIAALQGIRVQRVACGYAHTLVLTDEGQ 277
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
++ WGAN +GQLG G + + +P V + ++ +C AH +AA +
Sbjct: 278 VYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRVIEIAACHSAHTSAAKTQG--------- 328
Query: 142 SRLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 329 GHVYMWGQCRGQSVVLPYLTHFSCTDDVFAC 359
>gi|395855546|ref|XP_003800216.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Otolemur garnettii]
Length = 5093
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 176/411 (42%), Gaps = 67/411 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
++ ++VWG N Q G L+ K P + N + +A G + AV
Sbjct: 3219 RTKVFVWGLNDKDQLG------GLKGSKIKVPSFSETLSALNV--VQVAGGSKSLFAVTV 3270
Query: 80 DGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPREN 135
+G ++ G G+LG G G P +V L S VK ++ G H TA
Sbjct: 3271 EGKVYACGEATNGRLGLGLSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTV----- 3325
Query: 136 DGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
DG +++ WG+ PRL T I ++CGS H AL+
Sbjct: 3326 DG-----KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSS 3378
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGP--RVIKGYAKFLDEAPELEKITQVSCG--EYHSA 241
G L WG EYG+LG G L+ +V+ G+ ++ QV+CG + +
Sbjct: 3379 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-----------RVIQVACGSRDAQTL 3427
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A+++ G V++WG G G+LG + + +P+ + L+G + + CG S ALT
Sbjct: 3428 ALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTKS 3484
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLV 359
G ++ WG +LG G SD + R ++ G ++V A G H L
Sbjct: 3485 GVVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3532
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
G+++ WG N +GQ N +T P+ V G+ + ++A G HS
Sbjct: 3533 VTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVHGLEGQKITRVACGSSHSV 3583
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3329 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 3380
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 3381 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 3433
Query: 143 RLWVWGQNQGSNFPRLFWGAF----TPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 3434 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3490
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV+++G+VY
Sbjct: 3491 GKGDYFRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDSGQVYA 3541
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3542 WGDNDHGQQGNGTTTVNRK---PTLVHGLEGQKITRVACGSSHSVAWTT 3587
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 146/307 (47%), Gaps = 47/307 (15%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ G H A+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +
Sbjct: 3313 VHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHS 3372
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCG 175
AA+ S+ L+ WG + + RL G T P + + QV+CG
Sbjct: 3373 AALT---------SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3420
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S +AL++ GL+ +WG ++G+LGRG EG P+ I E + + Q+
Sbjct: 3421 SRDAQTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQI 3471
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G V+TWG G +LGH S K P+ V L G I VA G +
Sbjct: 3472 ECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGAL 3528
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG 353
H A+T G +YAWG + GQ G G T N T + + VACG
Sbjct: 3529 HCLAVTDSGQVYAWGDNDHGQQGNGTTTV------NRKPTLVHGLE----GQKITRVACG 3578
Query: 354 HSHTLVY 360
SH++ +
Sbjct: 3579 SSHSVAW 3585
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 142/326 (43%), Gaps = 50/326 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G D+A G H+A V + G
Sbjct: 4319 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRGIEVA--DVAAGGAHSACVTAAGD 4370
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG E + P+ V+ LQ V I+CG+ + +D T+
Sbjct: 4371 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC--LTDDDTV--- 4425
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 4426 --WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4483
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 4484 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4534
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G + VACG H+ AW S+
Sbjct: 4535 NDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAWSTSKPAS 4582
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPI 340
G P + +P E + + + IPI
Sbjct: 4583 AGKLP-----AQVPMEYN-HLQEIPI 4602
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 174/411 (42%), Gaps = 76/411 (18%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P C A A R + + G + AV +DG
Sbjct: 4213 IYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALATLRPVQLIGGEQTLFAVTADG 4263
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 4264 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE------- 4316
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG+ + PR+ + V+ G H ++ G L
Sbjct: 4317 ---GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEVADVAAGGAHSACVTAAGDL 4371
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSEN 246
WG YG+LG + + L+ P+++ EA + ++ ++C G+ + ++++
Sbjct: 4372 YTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVVDIACGSGDAQTLCLTDD 4422
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4423 DTVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 4479
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTL 358
WG +LG G SD + R P VQ +A G H +
Sbjct: 4480 WGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCV 4521
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
DG ++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4522 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4572
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 129/276 (46%), Gaps = 25/276 (9%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N + P+L G + N + H +AL+ G + +WG + G+LG G
Sbjct: 732 RVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG 791
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P+VI ++ + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 792 DTVP-LEEPKVISTFSG----KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 846
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + E +P V L G+ + DVACG + A+T G +++WG G+LG G
Sbjct: 847 ---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 903
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D V V CG ++ +DG+++ WG +
Sbjct: 904 DGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 951
Query: 379 NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ + YP ++ G +V +AAG H L +
Sbjct: 952 HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 987
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 122/253 (48%), Gaps = 30/253 (11%)
Query: 134 ENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N +GS + + QV+ GS + A++
Sbjct: 3213 ESAATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3271
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + A G G+LG G++ + PR + + ++ K V G H+ A++
Sbjct: 3272 GKVYACGEATNGRLGLGLSSGTVPIPRQVTALSSYV------VKKVAVHSGGRHATALTV 3325
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS ALTS G LY
Sbjct: 3326 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELY 3382
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRD 363
WG + G+LG G T + + +L+ +Q VACG + TL +
Sbjct: 3383 TWGLGEYGRLGHGDNTTQLKP---------KMVKVLLGHRVIQ-VACGSRDAQTLALTDE 3432
Query: 364 GRIHGWGYNSYGQ 376
G + WG +G+
Sbjct: 3433 GLVFSWGDGDFGK 3445
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 135/309 (43%), Gaps = 51/309 (16%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ G +H A++S+G +++WG E G+LG G P ++ L+ V ++ G +
Sbjct: 4303 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVADVAAGGAHS 4362
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGS 176
A + + L+ WG+ + P+L A + ++ ++CGS
Sbjct: 4363 ACVT---------AAGDLYTWGKGRYGRLGHSDSEDQLKPKLV-EALQGHRVV-DIACGS 4411
Query: 177 --VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
+ L++ + +WG +YG+LGRG +G + P I + +V
Sbjct: 4412 GDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVKVE 4462
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVH 294
CG S A++++G VYTWG G +LGH S D PR+V L G + +A G +H
Sbjct: 4463 CGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSLH 4519
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLVA 351
T G +Y WG + GQLG G T P LV V VA
Sbjct: 4520 CVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVA 4566
Query: 352 CGHSHTLVY 360
CG +HTL +
Sbjct: 4567 CGSAHTLAW 4575
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 45/285 (15%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+L A N + H A+A+ G +++WG + G+LG G + P+ +
Sbjct: 743 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVI 802
Query: 109 KQLQ----SEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT 164
+ V I+CG+ +AAI E L+ WG+ N+ RL G+
Sbjct: 803 STFSGKQAGKHVVHIACGSTYSAAITAEGE---------LYTWGRG---NYGRLGHGSSE 850
Query: 165 PNTI-----------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
I + V+CGS +A++E G + +WG +YG+LGRG +G + P
Sbjct: 851 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTP 909
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
++I+ + +V CG S A++++G+VY+WG G +LGH G +E
Sbjct: 910 KLIEKLQDL--------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH-----GTEE 956
Query: 272 LL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ P+ + L G + DVA G H ALT +++WG + Q
Sbjct: 957 HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 1001
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 136/293 (46%), Gaps = 33/293 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG G+ G G L PK + G AG + + IACG ++AA
Sbjct: 771 LAATGEVYSWGCGDGGRLGH-GDTVPLEEPKVIS-TFSGKQAGKHV--VHIACGSTYSAA 826
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E P V L+ V ++CG+ +A
Sbjct: 827 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA------ 880
Query: 137 GTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
++W WG R G TP I + +V CGS +AL++ G +
Sbjct: 881 -VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQV 939
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG + +LG G T E ++ P++++G + +K+ V+ G H A++E+ E
Sbjct: 940 YSWGKGDNQRLGHG-TEEHVRYPKLLEGL--------QGKKVIDVAAGSTHCLALTEDSE 990
Query: 249 VYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
V++W GS Q H +L+ E P + LD I +ACG S A +S
Sbjct: 991 VHSW--GSNDQCQHFDTLRVTKPE--PTALPGLDTKHIVGIACGPAQSFAWSS 1039
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 110/281 (39%), Gaps = 69/281 (24%)
Query: 186 GLLQAWGYNEYGQLGRGI---------TCEGLQGPRVIK--------------------G 216
G + WG+N GQLG GI CE L R ++ G
Sbjct: 4211 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4269
Query: 217 Y----------AKFLDEAPELEKITQ-------VSCGEYHSAAVSENGEVYTWGLGSVGQ 259
Y + + LE I V+ G H A+S GEVY+WG G+
Sbjct: 4270 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4329
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LGH + D+ PR + +L GI + DVA GG HS +T+ G LY WG + G+LG
Sbjct: 4330 LGHGNRSPCDR---PRVIESLRGIEVADVAAGGAHSACVTAAGDLYTWGKGRYGRLG--- 4383
Query: 320 QTRSFSLIPNESDTYFRNIPILVVP---NGVQLVAC--GHSHTLVYMRDGRIHGWGYNSY 374
SD+ + P LV + V +AC G + TL D + WG Y
Sbjct: 4384 ----------HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDY 4433
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADA 414
G+ S P +D G V K+ G S L +
Sbjct: 4434 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4474
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 98/219 (44%), Gaps = 46/219 (21%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ Q++C + LS G + YN P++++G A + +
Sbjct: 714 VTQIACAEKRFLILSRNGRVYTQAYNS-----------DTLAPQLVQGLA-----SRNIV 757
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI--- 283
KI S G +H A++ GEVY+WG G G+LGH GD L P+ + G
Sbjct: 758 KIAAHSDG-HHYLALAATGEVYSWGCGDGGRLGH-----GDTVPLEEPKVISTFSGKQAG 811
Query: 284 -FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
+ +ACG +S A+T++G LY WG G+LG G + IP+LV
Sbjct: 812 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-------------SSEDEAIPMLV 858
Query: 343 V-PNGVQL--VAC--GHSHTLVYMRDGRIHGWGYNSYGQ 376
G+++ VAC G + TL +G++ WG YG+
Sbjct: 859 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 897
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG + G G + +R P+Q+ + + IA G H DG
Sbjct: 4476 AVYTWGKGDYHRLGH-GSDDHVRRPRQVQ-------GLQGKKVIAIATGSLHCVCCTEDG 4527
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
++TWG N+ GQLGDGT + P V LQ + V ++CG+ T A
Sbjct: 4528 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4574
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 74/186 (39%), Gaps = 22/186 (11%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+TQ++C E +S NG VYT S L P+ V L I +A
Sbjct: 714 VTQIACAEKRFLILSRNGRVYTQAYNS-------------DTLAPQLVQGLASRNIVKIA 760
Query: 290 C--GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
G H AL + G +Y+WG G+LG G +P E V
Sbjct: 761 AHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPLEEPKVISTFSGKQAGKHV 814
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGG 406
+ACG +++ +G ++ WG +YG+ + S P V G +V +A G G
Sbjct: 815 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSG 874
Query: 407 HSAVLA 412
+ LA
Sbjct: 875 DAQTLA 880
>gi|380787033|gb|AFE65392.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
Length = 4834
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 178/412 (43%), Gaps = 69/412 (16%)
Query: 20 KSAIYVWGYNHSGQTG-RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
++ ++VWG N Q G KG + ++ P + N + +A G + AV
Sbjct: 2958 RTKVFVWGLNDKDQLGGLKGSKIKV-------PSFSETLSALNV--VQVAGGSKSLFAVT 3008
Query: 79 SDGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRE 134
+G ++ G G+LG G G P ++ L S VK ++ G H TA
Sbjct: 3009 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV---- 3064
Query: 135 NDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSE 184
DG +++ WG+ PRL T I ++CGS H AL+
Sbjct: 3065 -DG-----KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTS 3116
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGP--RVIKGYAKFLDEAPELEKITQVSCG--EYHS 240
G L WG EYG+LG G L+ +V+ G+ ++ QV+CG + +
Sbjct: 3117 SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-----------RVIQVACGSRDAQT 3165
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
A+++ G V++WG G G+LG + + +P+ + L+G + + CG S ALT
Sbjct: 3166 LALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTK 3222
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTL 358
G ++ WG +LG G SD + R ++ G ++V A G H L
Sbjct: 3223 SGVVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRGKKIVHVAVGALHCL 3270
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
G+++ WG N +GQ N +T P+ V G+ + ++A G HS
Sbjct: 3271 AVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3322
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3068 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 3119
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 3120 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 3172
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 3173 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3229
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV+++G+VY
Sbjct: 3230 GKGDYFRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDSGQVYA 3280
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3281 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3326
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 3007 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQI-----TALSSYVVKKVAVHSGGRHATA 3061
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+
Sbjct: 3062 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------ 3115
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 3116 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3169
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 3170 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 3220
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH S K P+ V L G I VA G +H A+T G
Sbjct: 3221 TKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDSGQ 3277
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 3278 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3324
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 144/327 (44%), Gaps = 50/327 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +D+A G H+A V + G
Sbjct: 4060 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRGIEV--VDVAAGGAHSACVTAAGD 4111
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG E + P+ V+ LQ V I+CG+ + +D T+
Sbjct: 4112 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC--LTDDDTV--- 4166
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 4167 --WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4224
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 4225 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4275
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G + VACG H+ AW S+
Sbjct: 4276 NDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAWSTSKPAS 4323
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPIL 341
G P + +P E + + + IPI+
Sbjct: 4324 AGKLP-----AQVPMEYN-HLQEIPII 4344
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 174/411 (42%), Gaps = 76/411 (18%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P C A A R + + G + AV +DG
Sbjct: 3954 IYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALATLRPVQLIGGEQTLFAVTADG 4004
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 4005 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE------- 4057
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG+ + PR+ + V+ G H ++ G L
Sbjct: 4058 ---GEVYSWGEAEDGKLGHGNRSPCDRPRVIES--LRGIEVVDVAAGGAHSACVTAAGDL 4112
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSEN 246
WG YG+LG + + L+ P+++ EA + ++ ++C G+ + ++++
Sbjct: 4113 YTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVVDIACGSGDAQTLCLTDD 4163
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4164 DTVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 4220
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTL 358
WG +LG G SD + R P VQ +A G H +
Sbjct: 4221 WGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCV 4262
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
DG ++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4263 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4313
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 129/276 (46%), Gaps = 25/276 (9%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N + P+L G + N + H +AL+ G + +WG + G+LG G
Sbjct: 471 RVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG 530
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P+VI ++ + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 531 DTVP-LEEPKVISAFSG----KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 585
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + E +P V L G+ + DVACG + A+T G +++WG G+LG G
Sbjct: 586 ---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 642
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D V V CG ++ +DG+++ WG +
Sbjct: 643 DGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 690
Query: 379 NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ + YP ++ G +V +AAG H L +
Sbjct: 691 HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 124/253 (49%), Gaps = 30/253 (11%)
Query: 134 ENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N +GS + + QV+ GS + A++
Sbjct: 2952 ESAATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + A G G+LG GI+ + PR I + ++ K V G H+ A++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYV------VKKVAVHSGGRHATALTV 3064
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS ALTS G LY
Sbjct: 3065 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELY 3121
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRD 363
WG + G+LG G T L P + + +L+ +Q VACG + TL +
Sbjct: 3122 TWGLGEYGRLGHGDNTT--QLKP-------KMVKVLLGHRVIQ-VACGSRDAQTLALTDE 3171
Query: 364 GRIHGWGYNSYGQ 376
G + WG +G+
Sbjct: 3172 GLVFSWGDGDFGK 3184
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 134/310 (43%), Gaps = 53/310 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHC 125
+ G +H A++S+G +++WG E G+LG G P ++ L+ E V + GAH
Sbjct: 4044 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4103
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCG 175
A L+ WG+ + P+L A + ++ ++CG
Sbjct: 4104 ACVTA----------AGDLYTWGKGRYGRLGHSDSEDQLKPKLV-EALQGHRVV-DIACG 4151
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + L++ + +WG +YG+LGRG +G + P I + +V
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVKV 4202
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G VYTWG G +LGH S D PR+V L G + +A G +
Sbjct: 4203 ECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSL 4259
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLV 350
H T G +Y WG + GQLG G T P LV V V
Sbjct: 4260 HCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRV 4306
Query: 351 ACGHSHTLVY 360
ACG +HTL +
Sbjct: 4307 ACGSAHTLAW 4316
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 45/285 (15%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+L A N + H A+A+ G +++WG + G+LG G + P+ +
Sbjct: 482 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVI 541
Query: 109 KQLQ----SEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT 164
+ V I+CG+ +AAI E L+ WG+ N+ RL G+
Sbjct: 542 SAFSGKQAGKHVVHIACGSTYSAAITAEGE---------LYTWGRG---NYGRLGHGSSE 589
Query: 165 PNTI-----------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
I + V+CGS +A++E G + +WG +YG+LGRG +G + P
Sbjct: 590 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTP 648
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
++I+ + +V CG S A++++G+VY+WG G +LGH G +E
Sbjct: 649 KLIEKLQDL--------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH-----GTEE 695
Query: 272 LL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ P+ + L G + DVA G H ALT +++WG + Q
Sbjct: 696 HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 136/293 (46%), Gaps = 33/293 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG G+ G G L PK + G AG + + IACG ++AA
Sbjct: 510 LAATGEVYSWGCGDGGRLGH-GDTVPLEEPKVIS-AFSGKQAGKHV--VHIACGSTYSAA 565
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E P V L+ V ++CG+ +A
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA------ 619
Query: 137 GTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
++W WG R G TP I + +V CGS +AL++ G +
Sbjct: 620 -VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQV 678
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG + +LG G T E ++ P++++G + +K+ V+ G H A++E+ E
Sbjct: 679 YSWGKGDNQRLGHG-TEEHVRYPKLLEGL--------QGKKVIDVAAGSTHCLALTEDSE 729
Query: 249 VYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
V++W GS Q H +L+ E P + LD I +ACG S A +S
Sbjct: 730 VHSW--GSNDQCQHFDTLRVTKPE--PAALPGLDTKHIVGIACGPAQSFAWSS 778
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 139/340 (40%), Gaps = 63/340 (18%)
Query: 56 CPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
C AN IAC + ++ +G ++T N P+ V+ L S
Sbjct: 445 CEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRN 494
Query: 116 VKSISCGA--HCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAF 163
+ I+ + H A+A +T ++ WG G P++ AF
Sbjct: 495 IVKIAAHSDGHHYLALA---------ATGEVYSWGCGDGGRLGHGDTVPLEEPKVI-SAF 544
Query: 164 TPNTI---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF 220
+ + ++CGS + A++ G L WG YG+LG G + E P ++ G
Sbjct: 545 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-SSEDEAIPMLVAGLKGL 603
Query: 221 LDEAPELEKITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
K+ V+CG + + AV+ENG+V++WG G G+LG D P+ +
Sbjct: 604 --------KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR---GGSDGCKTPKLIE 652
Query: 279 ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
L + + V CG S ALT G +Y+WG +LG G ++ + R
Sbjct: 653 KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG------------TEEHVRYP 700
Query: 339 PILVVPNGVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+L G ++ VA G +H L D +H WG N Q
Sbjct: 701 KLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 110/281 (39%), Gaps = 69/281 (24%)
Query: 186 GLLQAWGYNEYGQLGRGI---------TCEGLQGPRVIK--------------------G 216
G + WG+N GQLG GI CE L R ++ G
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010
Query: 217 Y----------AKFLDEAPELEKITQ-------VSCGEYHSAAVSENGEVYTWGLGSVGQ 259
Y + + LE I V+ G H A+S GEVY+WG G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LGH + D+ PR + +L GI + DVA GG HS +T+ G LY WG + G+LG
Sbjct: 4071 LGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG--- 4124
Query: 320 QTRSFSLIPNESDTYFRNIPILVVP---NGVQLVAC--GHSHTLVYMRDGRIHGWGYNSY 374
SD+ + P LV + V +AC G + TL D + WG Y
Sbjct: 4125 ----------HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDY 4174
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADA 414
G+ S P +D G V K+ G S L +
Sbjct: 4175 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4215
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG + G G + +R P+Q+ + + IA G H DG
Sbjct: 4217 AVYTWGKGDYHRLGH-GSDDHVRRPRQVQ-------GLQGKKVIAIATGSLHCVCCTEDG 4268
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
++TWG N+ GQLGDGT + P V LQ + V ++CG+ T A
Sbjct: 4269 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 74/186 (39%), Gaps = 22/186 (11%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+TQ++C E +S NG VYT S L P+ V L I +A
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------------DTLAPQLVQGLASRNIVKIA 499
Query: 290 C--GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
G H AL + G +Y+WG G+LG G +P E V
Sbjct: 500 AHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPLEEPKVISAFSGKQAGKHV 553
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGG 406
+ACG +++ +G ++ WG +YG+ + S P V G +V +A G G
Sbjct: 554 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSG 613
Query: 407 HSAVLA 412
+ LA
Sbjct: 614 DAQTLA 619
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 82/218 (37%), Gaps = 62/218 (28%)
Query: 246 NGEVYTWGLGSVGQLG--------------------HCSLQSGDKELL------------ 273
+G +Y WG GQLG L G++ L
Sbjct: 3951 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010
Query: 274 -----------------PRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWGGSQAGQ 314
P + ++ +FIK VA GG H AL+S+G +Y+WG ++ G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LG G RS P ++ R I ++ VA G +H+ G ++ WG Y
Sbjct: 4071 LGHG--NRSPCDRPRVIES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRY 4120
Query: 375 GQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
G+ + S P V+ G V +A G G + L
Sbjct: 4121 GRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTL 4158
>gi|259089405|ref|NP_001158608.1| probable E3 ubiquitin-protein ligase HERC6 isoform 2 [Homo sapiens]
gi|55832764|gb|AAV66895.1| HERC6 splice variant [Homo sapiens]
Length = 986
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 123/242 (50%), Gaps = 19/242 (7%)
Query: 168 IICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL 227
I+ VSCG H +A+ G + AWG GQLG G E P+ I
Sbjct: 76 IVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDI------- 128
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
KI QVSCG YHS A+S++ +V++WG S GQLG + + P+RV +L+GI +
Sbjct: 129 -KIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQ 185
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN-G 346
VA GG HS AL+ G + WG + AGQL L + +P +S+ + + + + N G
Sbjct: 186 VAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRN-----VPVQSN---KPLSVGALKNLG 237
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGG 406
V ++CG +HT V +DG++ +G N GQ + P V+ G V ++ G
Sbjct: 238 VVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSY 297
Query: 407 HS 408
H+
Sbjct: 298 HT 299
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 160/362 (44%), Gaps = 55/362 (15%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
L A G H+ + ++ + + G N GQLG + + PE ++ L++ V +SCG
Sbjct: 26 LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKE 85
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQ-NQGS----NFPRLFWGAFTPNTI-------ICQV 172
+ A+ R++ WG ++G F + +FTP I I QV
Sbjct: 86 HSLAVCH---------KGRVFAWGAGSEGQLGIGEFKEI---SFTPKKIMTLNDIKIIQV 133
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
SCG H +ALS+ + +WG N +GQLG G P+ ++ L+ P + Q
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRS----LEGIP----LAQ 185
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
V+ G HS A+S G + WG S GQL + P V AL + + ++CG
Sbjct: 186 VAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGD 245
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLV 350
H+ LT G ++ +G +++GQLG P T + P LV + V +
Sbjct: 246 AHTAVLTQDGKVFTFGDNRSGQLGYSP-------------TPEKRGPQLVERIDGLVSQI 292
Query: 351 ACGHSHTLVYMR-DGRIHGWGYN-------SYGQAANEKSTYAWYPSPVDWCVGEVRKLA 402
CG HTL Y+ G++ +G+ ++ +A E + S D+ +V+ +
Sbjct: 293 DCGSYHTLAYVHTTGQVVSFGHGPSDTSKPTHPEALTENFDISCLISAEDFVDVQVKHIF 352
Query: 403 AG 404
AG
Sbjct: 353 AG 354
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 142/315 (45%), Gaps = 60/315 (19%)
Query: 27 GYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLD-IACGHEHTAAVASDGTLFT 85
G N GQ GR+G +R +LP + + +D ++CG EH+ AV G +F
Sbjct: 48 GDNSRGQLGRRGAQR-----GELPEPI----QALETLIVDLVSCGKEHSLAVCHKGRVFA 98
Query: 86 WGANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRL 144
WGA GQLG G +E P+K+ L + +SCG + + A+++ S++
Sbjct: 99 WGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK---------DSQV 149
Query: 145 WVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+ WG+N G FP +P + + QV+ G H ALS CG W
Sbjct: 150 FSWGKNSHGQLGLGKEFP----SQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW 205
Query: 192 GYNEYGQL---GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
G N GQL GR + + + V G K L + +SCG+ H+A ++++G+
Sbjct: 206 GSNSAGQLALSGRNVPVQSNKPLSV--GALKNLG-------VVYISCGDAHTAVLTQDGK 256
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
V+T+G GQLG+ ++ P+ V +DG+ + + CG H+ A Y
Sbjct: 257 VFTFGDNRSGQLGY---SPTPEKRGPQLVERIDGL-VSQIDCGSYHTLA-------YVHT 305
Query: 309 GSQAGQLGLGPQTRS 323
Q G GP S
Sbjct: 306 TGQVVSFGHGPSDTS 320
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 95/186 (51%), Gaps = 14/186 (7%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
++ Q + GE HS + N V + G S GQLG Q G+ LP + AL+ + + V
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGE---LPEPIQALETLIVDLV 80
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
+CG HS A+ KG ++AWG GQLG+G + + S P + T +I I+
Sbjct: 81 SCGKEHSLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKIMT-LNDIKIIQ------ 132
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGG 406
V+CGH H+L +D ++ WG NS+GQ K + P V G + ++AAGG
Sbjct: 133 -VSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 191
Query: 407 HSAVLA 412
HS L+
Sbjct: 192 HSFALS 197
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 117/242 (48%), Gaps = 25/242 (10%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG GQ G + PK++ + + + ++CGH H+ A++
Sbjct: 93 KGRVFAWGAGSEGQLGIGEFKEISFTPKKIM-------TLNDIKIIQVSCGHYHSLALSK 145
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISC-GAHCTA-AIAEPREND 136
D +F+WG N GQLG G E + P++V+ L+ + ++ GAH A ++
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW 205
Query: 137 GTISTSRLWVWGQN--QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
G+ S +L + G+N SN P L GA N + +SCG H L++ G + +G N
Sbjct: 206 GSNSAGQLALSGRNVPVQSNKP-LSVGALK-NLGVVYISCGDAHTAVLTQDGKVFTFGDN 263
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEVYTWG 253
GQLG T E +GP++++ ++Q+ CG YH+ A V G+V ++G
Sbjct: 264 RSGQLGYSPTPEK-RGPQLVERIDGL---------VSQIDCGSYHTLAYVHTTGQVVSFG 313
Query: 254 LG 255
G
Sbjct: 314 HG 315
Score = 41.6 bits (96), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 58/144 (40%), Gaps = 12/144 (8%)
Query: 270 KELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPN 329
+EL RR G + A G HS L + + + G + GQLG R
Sbjct: 10 RELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQR------G 63
Query: 330 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ-AANEKSTYAWYP 388
E + + L+ V LV+CG H+L GR+ WG S GQ E ++ P
Sbjct: 64 ELPEPIQALETLI----VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTP 119
Query: 389 SPVDWCVGEVRKLAAGGGHSAVLA 412
+ + +++ + GH LA
Sbjct: 120 KKI-MTLNDIKIIQVSCGHYHSLA 142
>gi|119626424|gb|EAX06019.1| hect domain and RLD 6, isoform CRA_b [Homo sapiens]
Length = 1028
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 123/242 (50%), Gaps = 19/242 (7%)
Query: 168 IICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL 227
I+ VSCG H +A+ G + AWG GQLG G E P+ I
Sbjct: 76 IVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDI------- 128
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
KI QVSCG YHS A+S++ +V++WG S GQLG + + P+RV +L+GI +
Sbjct: 129 -KIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQ 185
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN-G 346
VA GG HS AL+ G + WG + AGQL L + +P +S+ + + + + N G
Sbjct: 186 VAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRN-----VPVQSN---KPLSVGALKNLG 237
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGG 406
V ++CG +HT V +DG++ +G N GQ + P V+ G V ++ G
Sbjct: 238 VVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSY 297
Query: 407 HS 408
H+
Sbjct: 298 HT 299
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 164/375 (43%), Gaps = 55/375 (14%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
L A G H+ + ++ + + G N GQLG + + PE ++ L++ V +SCG
Sbjct: 26 LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKE 85
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQ-NQGS----NFPRLFWGAFTPNTI-------ICQV 172
+ A+ R++ WG ++G F + +FTP I I QV
Sbjct: 86 HSLAVCH---------KGRVFAWGAGSEGQLGIGEFKEI---SFTPKKIMTLNDIKIIQV 133
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
SCG H +ALS+ + +WG N +GQLG G P+ ++ L+ P + Q
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRS----LEGIP----LAQ 185
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
V+ G HS A+S G + WG S GQL + P V AL + + ++CG
Sbjct: 186 VAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGD 245
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLV 350
H+ LT G ++ +G +++GQLG P T + P LV + V +
Sbjct: 246 AHTAVLTQDGKVFTFGDNRSGQLGYSP-------------TPEKRGPQLVERIDGLVSQI 292
Query: 351 ACGHSHTLVYMR-DGRIHGWGYN-------SYGQAANEKSTYAWYPSPVDWCVGEVRKLA 402
CG HTL Y+ G++ +G+ ++ +A E + S D+ +V+ +
Sbjct: 293 DCGSYHTLAYVHTTGQVVSFGHGPSDTSKPTHPEALTENFDISCLISAEDFVDVQVKHIF 352
Query: 403 AGGGHSAVLADACSL 417
AG + V S+
Sbjct: 353 AGTYANFVTTHQVSI 367
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 142/315 (45%), Gaps = 60/315 (19%)
Query: 27 GYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLD-IACGHEHTAAVASDGTLFT 85
G N GQ GR+G +R +LP + + +D ++CG EH+ AV G +F
Sbjct: 48 GDNSRGQLGRRGAQR-----GELPEPI----QALETLIVDLVSCGKEHSLAVCHKGRVFA 98
Query: 86 WGANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRL 144
WGA GQLG G +E P+K+ L + +SCG + + A+++ S++
Sbjct: 99 WGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK---------DSQV 149
Query: 145 WVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+ WG+N G FP +P + + QV+ G H ALS CG W
Sbjct: 150 FSWGKNSHGQLGLGKEFP----SQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW 205
Query: 192 GYNEYGQL---GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
G N GQL GR + + + V G K L + +SCG+ H+A ++++G+
Sbjct: 206 GSNSAGQLALSGRNVPVQSNKPLSV--GALKNLG-------VVYISCGDAHTAVLTQDGK 256
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
V+T+G GQLG+ ++ P+ V +DG+ + + CG H+ A Y
Sbjct: 257 VFTFGDNRSGQLGY---SPTPEKRGPQLVERIDGL-VSQIDCGSYHTLA-------YVHT 305
Query: 309 GSQAGQLGLGPQTRS 323
Q G GP S
Sbjct: 306 TGQVVSFGHGPSDTS 320
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 95/186 (51%), Gaps = 14/186 (7%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
++ Q + GE HS + N V + G S GQLG Q G+ LP + AL+ + + V
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGE---LPEPIQALETLIVDLV 80
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
+CG HS A+ KG ++AWG GQLG+G + + S P + T +I I+
Sbjct: 81 SCGKEHSLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKIMT-LNDIKIIQ------ 132
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGG 406
V+CGH H+L +D ++ WG NS+GQ K + P V G + ++AAGG
Sbjct: 133 -VSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 191
Query: 407 HSAVLA 412
HS L+
Sbjct: 192 HSFALS 197
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 117/242 (48%), Gaps = 25/242 (10%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG GQ G + PK++ + + + ++CGH H+ A++
Sbjct: 93 KGRVFAWGAGSEGQLGIGEFKEISFTPKKIM-------TLNDIKIIQVSCGHYHSLALSK 145
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISC-GAHCTA-AIAEPREND 136
D +F+WG N GQLG G E + P++V+ L+ + ++ GAH A ++
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW 205
Query: 137 GTISTSRLWVWGQN--QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
G+ S +L + G+N SN P L GA N + +SCG H L++ G + +G N
Sbjct: 206 GSNSAGQLALSGRNVPVQSNKP-LSVGALK-NLGVVYISCGDAHTAVLTQDGKVFTFGDN 263
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEVYTWG 253
GQLG T E +GP++++ ++Q+ CG YH+ A V G+V ++G
Sbjct: 264 RSGQLGYSPTPEK-RGPQLVERIDGL---------VSQIDCGSYHTLAYVHTTGQVVSFG 313
Query: 254 LG 255
G
Sbjct: 314 HG 315
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 58/144 (40%), Gaps = 12/144 (8%)
Query: 270 KELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPN 329
+EL RR G + A G HS L + + + G + GQLG R
Sbjct: 10 RELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQR------G 63
Query: 330 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA-ANEKSTYAWYP 388
E + + L+ V LV+CG H+L GR+ WG S GQ E ++ P
Sbjct: 64 ELPEPIQALETLI----VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTP 119
Query: 389 SPVDWCVGEVRKLAAGGGHSAVLA 412
+ + +++ + GH LA
Sbjct: 120 KKI-MTLNDIKIIQVSCGHYHSLA 142
>gi|47212899|emb|CAF90789.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3089
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 118/405 (29%), Positives = 176/405 (43%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E K L P+L A A + I G T ++SDG+
Sbjct: 384 VYVWGSNSSHQLVEGTQE------KILQPKLAATFADAQT----IEAGQYCTFVISSDGS 433
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA----HCTAAIAEPRENDGT 138
+ G +G+LG G + +K+ +K +S H A E
Sbjct: 434 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTE------- 486
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG + +P+L G ++C VS G H A+SE G L
Sbjct: 487 ---GEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVSEDGEL 542
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G P ++K ++ + +VSCG H+ A+S++G
Sbjct: 543 YTWGEGDFGRLGHG-DSNSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 591
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ V AL G+FI+ V G S ALTS G +Y
Sbjct: 592 TVWSFGGGDNGKLGH-----GDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVY 646
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V ++ G SH L D
Sbjct: 647 AWGCGAC--LGCG-SSEATALRP-------KLIEELATTRVVD-ISIGDSHCLALSHDNE 695
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 696 VYAWGNNSMGQCGQGNSTGPITKPKKVVGLDGVAIQQISAGTSHS 740
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 136/289 (47%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV+ DG
Sbjct: 489 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVSEDGE 541
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 542 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 592
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P + I +V GS +AL+ G + AW
Sbjct: 593 -VWSFG---GGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAW 648
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A ++ +S G+ H A+S + EVY
Sbjct: 649 GCG--ACLGCGSSEATALRPKLIEELAT--------TRVVDISIGDSHCLALSHDNEVYA 698
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++VV LDG+ I+ ++ G HS A T+
Sbjct: 699 WGNNSMGQCGQGN--STGPITKPKKVVGLDGVAIQQISAGTSHSLAWTA 745
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VSE EVY WG S QL G +E + + +A + + G + ++S G
Sbjct: 378 VSETCEVYVWGSNSSHQLVE-----GTQEKILQPKLAATFADAQTIEAGQYCTFVISSDG 432
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ A G G+LGLG +L + + R I + G HTL +
Sbjct: 433 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RAIKKVSSSKG------SDGHTLAFTT 485
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+G + WG YG+ + S+ YP + + G+V ++AG HSA +++
Sbjct: 486 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSE 538
>gi|440898458|gb|ELR49953.1| RCC1 and BTB domain-containing protein 2, partial [Bos grunniens
mutus]
Length = 544
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 116/233 (49%), Gaps = 24/233 (10%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H+V + G + WG+N Y QLG G T GL + + +++ +V+CG
Sbjct: 103 HIVLATTEGEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSN--------KQVIEVACGS 154
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHSC 296
YHS ++ +GEV+ WG + GQ+G S + +PRRV L + ++ACG + S
Sbjct: 155 YHSLVLTSDGEVFAWGYNNSGQVGS---GSTANQPIPRRVTGCLQSKVVVNIACGQMCSM 211
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ + G ++ WG + GQLGLG + + R VQ VACG++H
Sbjct: 212 AVVNTGEVFVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR----------VQRVACGYAH 261
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
TLV +G+++ WG NSYGQ + YP+PV V + R + HSA
Sbjct: 262 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPV--VVEKDRIIEIAACHSA 312
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 134/300 (44%), Gaps = 43/300 (14%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTAAIAEPRENDGTIS 140
+F G N G LG G + P ++ L + + +S G+ H A E
Sbjct: 60 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTE--------- 110
Query: 141 TSRLWVWGQNQGSNFPRLFWGA-FTP--------NTIICQVSCGSVHVVALSECGLLQAW 191
++ WG N S A P N + +V+CGS H + L+ G + AW
Sbjct: 111 -GEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAW 169
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
GYN GQ+G G T PR + G + + + ++CG+ S AV GEV+
Sbjct: 170 GYNNSGQVGSGSTANQ-PIPRRVTG-------CLQSKVVVNIACGQMCSMAVVNTGEVFV 221
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG GQLG L S + P RV AL GI ++ VACG H+ LT +G +YAWG +
Sbjct: 222 WGYNGNGQLG---LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 278
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRIHGWG 370
GQLG G N+S+ + ++ +++ AC +HT + G ++ WG
Sbjct: 279 YGQLGTG----------NKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 328
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 116/243 (47%), Gaps = 39/243 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G +P + L +N + +++ACG H+ + SDG
Sbjct: 113 VFTWGHNAYSQLG-NGTTNAGLVPYHISTNL------SNKQVIEVACGSYHSLVLTSDGE 165
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P +V LQS+ V +I+CG C+ A+ ++T
Sbjct: 166 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAV---------VNT 216
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N N P A + +V+CG H + L++ G + AWG
Sbjct: 217 GEVFVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 276
Query: 194 NEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G + + P V+ E ++I ++ +C H SAA ++ G VY
Sbjct: 277 NSYGQLGTGNKSNQSYPTPVVV-----------EKDRIIEIAACHSAHTSAAKTQGGHVY 325
Query: 251 TWG 253
WG
Sbjct: 326 MWG 328
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 118/267 (44%), Gaps = 39/267 (14%)
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAHCTAAIAE 131
H ++G +FTWG N + QLG+GT P + L ++ V ++CG++ + +
Sbjct: 103 HIVLATTEGEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLT- 161
Query: 132 PRENDGTISTSRLWVWGQNQGSN----------FPRLFWGAFTPNTIICQVSCGSVHVVA 181
+DG + + WG N PR G ++ ++CG + +A
Sbjct: 162 ---SDGEV-----FAWGYNNSGQVGSGSTANQPIPRRVTGCLQSKVVV-NIACGQMCSMA 212
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
+ G + WGYN GQLG G + RV A + ++ +V+CG H+
Sbjct: 213 VVNTGEVFVWGYNGNGQLGLGSSGNQPTPCRV---------AALQGIRVQRVACGYAHTL 263
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVH-SCAL 298
+++ G+VY WG S GQLG +G+K + P VV I+ AC H S A
Sbjct: 264 VLTDEGQVYAWGANSYGQLG-----TGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAK 318
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFS 325
T G +Y WG + + L P FS
Sbjct: 319 TQGGHVYMWGQCRGQSVTL-PHLTHFS 344
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 68/151 (45%), Gaps = 20/151 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++VWGYN +GQ G Q P A R +ACG+ HT + +G
Sbjct: 219 VFVWGYNGNGQLGLGSSGNQ--------PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 270
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
++ WGAN +GQLG G + + +P V + ++ +C AH +AA +
Sbjct: 271 VYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQG--------- 321
Query: 142 SRLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 322 GHVYMWGQCRGQSVTLPHLTHFSSTDDVFAC 352
>gi|4079809|gb|AAD08657.1| HERC2 [Homo sapiens]
Length = 4834
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 176/411 (42%), Gaps = 67/411 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
++ ++VWG N Q G L+ K P + N + +A G + AV
Sbjct: 2958 RTKVFVWGLNDKDQLG------GLKGSKIKVPSFSETLSALNV--VQVAGGSKSLFAVTV 3009
Query: 80 DGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPREN 135
+G ++ G G+LG G G P ++ L S VK ++ G H TA
Sbjct: 3010 EGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV----- 3064
Query: 136 DGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
DG +++ WG+ PRL T I ++CGS H AL+
Sbjct: 3065 DG-----KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSS 3117
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGP--RVIKGYAKFLDEAPELEKITQVSCG--EYHSA 241
G L WG EYG+LG G L+ +V+ G+ ++ QV+CG + +
Sbjct: 3118 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-----------RVIQVACGSRDAQTL 3166
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A+++ G V++WG G G+LG + + +P+ + L+G + + CG S ALT
Sbjct: 3167 ALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTKS 3223
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLV 359
G ++ WG +LG G SD + R ++ G ++V A G H L
Sbjct: 3224 GVVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3271
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
G+++ WG N +GQ N +T P+ V G+ + ++A G HS
Sbjct: 3272 VTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3322
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3068 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 3119
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 3120 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 3172
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 3173 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3229
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV+++G+VY
Sbjct: 3230 GKGDYFRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDSGQVYA 3280
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3281 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3326
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 3007 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQI-----TALSSYVVKKVAVHSGGRHATA 3061
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+
Sbjct: 3062 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------ 3115
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 3116 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3169
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 3170 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 3220
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH S K P+ V L G I VA G +H A+T G
Sbjct: 3221 TKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDSGQ 3277
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 3278 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3324
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 144/327 (44%), Gaps = 50/327 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +D+A G H+A V + G
Sbjct: 4060 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRGIEV--VDVAAGGAHSACVTAAGD 4111
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG E + P+ V+ LQ V I+CG+ + +D T+
Sbjct: 4112 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC--LTDDDTV--- 4166
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 4167 --WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4224
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 4225 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4275
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G + VACG H+ AW S+
Sbjct: 4276 NDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAWSTSKPAS 4323
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPIL 341
G P + +P E + + + IPI+
Sbjct: 4324 AGKLP-----AQVPMEYN-HLQEIPII 4344
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 174/411 (42%), Gaps = 76/411 (18%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P C A A R + + G + AV +DG
Sbjct: 3954 IYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALATLRPVQLIGGEQTLFAVTADG 4004
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 4005 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE------- 4057
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG+ + PR+ + V+ G H ++ G L
Sbjct: 4058 ---GEVYSWGEAEDGKLGHGNRSPCDRPRVIES--LRGIEVVDVAAGGAHSACVTAAGDL 4112
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSEN 246
WG YG+LG + + L+ P+++ EA + ++ ++C G+ + ++++
Sbjct: 4113 YTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVVDIACGSGDAQTLCLTDD 4163
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4164 DTVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 4220
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTL 358
WG +LG G SD + R P VQ +A G H +
Sbjct: 4221 WGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCV 4262
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
DG ++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4263 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4313
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 129/276 (46%), Gaps = 25/276 (9%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N + P+L G + N + H +AL+ G + +WG + G+LG G
Sbjct: 471 RVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG 530
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P+VI ++ + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 531 DTVP-LEEPKVISAFSG----KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 585
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + E +P V L G+ + DVACG + A+T G +++WG G+LG G
Sbjct: 586 ---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 642
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D V V CG ++ +DG+++ WG +
Sbjct: 643 DGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 690
Query: 379 NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ + YP ++ G +V +AAG H L +
Sbjct: 691 HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 124/253 (49%), Gaps = 30/253 (11%)
Query: 134 ENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N +GS + + QV+ GS + A++
Sbjct: 2952 ESAATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + A G G+LG GI+ + PR I + ++ K V G H+ A++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYV------VKKVAVHSGGRHATALTV 3064
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS ALTS G LY
Sbjct: 3065 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELY 3121
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRD 363
WG + G+LG G T L P + + +L+ +Q VACG + TL +
Sbjct: 3122 TWGLGEYGRLGHGDNTT--QLKP-------KMVKVLLGHRVIQ-VACGSRDAQTLALTDE 3171
Query: 364 GRIHGWGYNSYGQ 376
G + WG +G+
Sbjct: 3172 GLVFSWGDGDFGK 3184
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 134/310 (43%), Gaps = 53/310 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHC 125
+ G +H A++S+G +++WG E G+LG G P ++ L+ E V + GAH
Sbjct: 4044 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4103
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCG 175
A L+ WG+ + P+L A + ++ ++CG
Sbjct: 4104 ACVTA----------AGDLYTWGKGRYGRLGHSDSEDQLKPKLV-EALQGHRVV-DIACG 4151
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + L++ + +WG +YG+LGRG +G + P I + +V
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVKV 4202
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G VYTWG G +LGH S D PR+V L G + +A G +
Sbjct: 4203 ECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSL 4259
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLV 350
H T G +Y WG + GQLG G T P LV V V
Sbjct: 4260 HCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRV 4306
Query: 351 ACGHSHTLVY 360
ACG +HTL +
Sbjct: 4307 ACGSAHTLAW 4316
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 45/285 (15%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+L A N + H A+A+ G +++WG + G+LG G + P+ +
Sbjct: 482 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVI 541
Query: 109 KQLQ----SEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT 164
+ V I+CG+ +AAI E L+ WG+ N+ RL G+
Sbjct: 542 SAFSGKQAGKHVVHIACGSTYSAAITAEGE---------LYTWGRG---NYGRLGHGSSE 589
Query: 165 PNTI-----------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
I + V+CGS +A++E G + +WG +YG+LGRG +G + P
Sbjct: 590 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTP 648
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
++I+ + +V CG S A++++G+VY+WG G +LGH G +E
Sbjct: 649 KLIEKLQDL--------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH-----GTEE 695
Query: 272 LL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ P+ + L G + DVA G H ALT +++WG + Q
Sbjct: 696 HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 136/293 (46%), Gaps = 33/293 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG G+ G G L PK + G AG + + IACG ++AA
Sbjct: 510 LAATGEVYSWGCGDGGRLGH-GDTVPLEEPKVIS-AFSGKQAGKHV--VHIACGSTYSAA 565
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E P V L+ V ++CG+ +A
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA------ 619
Query: 137 GTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
++W WG R G TP I + +V CGS +AL++ G +
Sbjct: 620 -VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQV 678
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG + +LG G T E ++ P++++G + +K+ V+ G H A++E+ E
Sbjct: 679 YSWGKGDNQRLGHG-TEEHVRYPKLLEGL--------QGKKVIDVAAGSTHCLALTEDSE 729
Query: 249 VYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
V++W GS Q H +L+ E P + LD I +ACG S A +S
Sbjct: 730 VHSW--GSNDQCQHFDTLRVTKPE--PAALPGLDTKHIVGIACGPAQSFAWSS 778
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 139/340 (40%), Gaps = 63/340 (18%)
Query: 56 CPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
C AN IAC + ++ +G ++T N P+ V+ L S
Sbjct: 445 CEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRN 494
Query: 116 VKSISCGA--HCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAF 163
+ I+ + H A+A +T ++ WG G P++ AF
Sbjct: 495 IVKIAAHSDGHHYLALA---------ATGEVYSWGCGDGGRLGHGDTVPLEEPKVI-SAF 544
Query: 164 TPNTI---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF 220
+ + ++CGS + A++ G L WG YG+LG G + E P ++ G
Sbjct: 545 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-SSEDEAIPMLVAGLKGL 603
Query: 221 LDEAPELEKITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
K+ V+CG + + AV+ENG+V++WG G G+LG D P+ +
Sbjct: 604 --------KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR---GGSDGCKTPKLIE 652
Query: 279 ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
L + + V CG S ALT G +Y+WG +LG G ++ + R
Sbjct: 653 KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG------------TEEHVRYP 700
Query: 339 PILVVPNGVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+L G ++ VA G +H L D +H WG N Q
Sbjct: 701 KLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 110/281 (39%), Gaps = 69/281 (24%)
Query: 186 GLLQAWGYNEYGQLGRGI---------TCEGLQGPRVIK--------------------G 216
G + WG+N GQLG GI CE L R ++ G
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010
Query: 217 Y----------AKFLDEAPELEKITQ-------VSCGEYHSAAVSENGEVYTWGLGSVGQ 259
Y + + LE I V+ G H A+S GEVY+WG G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LGH + D+ PR + +L GI + DVA GG HS +T+ G LY WG + G+LG
Sbjct: 4071 LGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG--- 4124
Query: 320 QTRSFSLIPNESDTYFRNIPILVVP---NGVQLVAC--GHSHTLVYMRDGRIHGWGYNSY 374
SD+ + P LV + V +AC G + TL D + WG Y
Sbjct: 4125 ----------HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDY 4174
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADA 414
G+ S P +D G V K+ G S L +
Sbjct: 4175 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4215
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG + G G + +R P+Q+ + + IA G H DG
Sbjct: 4217 AVYTWGKGDYHRLGH-GSDDHVRRPRQVQ-------GLQGKKVIAIATGSLHCVCCTEDG 4268
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
++TWG N+ GQLGDGT + P V LQ + V ++CG+ T A
Sbjct: 4269 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 74/186 (39%), Gaps = 22/186 (11%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+TQ++C E +S NG VYT S L P+ V L I +A
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------------DTLAPQLVQGLASRNIVKIA 499
Query: 290 C--GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
G H AL + G +Y+WG G+LG G +P E V
Sbjct: 500 AHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPLEEPKVISAFSGKQAGKHV 553
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGG 406
+ACG +++ +G ++ WG +YG+ + S P V G +V +A G G
Sbjct: 554 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSG 613
Query: 407 HSAVLA 412
+ LA
Sbjct: 614 DAQTLA 619
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 82/218 (37%), Gaps = 62/218 (28%)
Query: 246 NGEVYTWGLGSVGQLG--------------------HCSLQSGDKELL------------ 273
+G +Y WG GQLG L G++ L
Sbjct: 3951 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010
Query: 274 -----------------PRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWGGSQAGQ 314
P + ++ +FIK VA GG H AL+S+G +Y+WG ++ G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LG G RS P ++ R I ++ VA G +H+ G ++ WG Y
Sbjct: 4071 LGHG--NRSPCDRPRVIES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRY 4120
Query: 375 GQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
G+ + S P V+ G V +A G G + L
Sbjct: 4121 GRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTL 4158
>gi|410349247|gb|JAA41227.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 176/411 (42%), Gaps = 67/411 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
++ ++VWG N Q G L+ K P + N + +A G + AV
Sbjct: 2958 RTKVFVWGLNDKDQLG------GLKGSKIKVPSFSETLSALNV--VQVAGGSKSLFAVTV 3009
Query: 80 DGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPREN 135
+G ++ G G+LG G G P ++ L S VK ++ G H TA
Sbjct: 3010 EGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV----- 3064
Query: 136 DGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
DG +++ WG+ PRL T I ++CGS H AL+
Sbjct: 3065 DG-----KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSS 3117
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGP--RVIKGYAKFLDEAPELEKITQVSCG--EYHSA 241
G L WG EYG+LG G L+ +V+ G+ ++ QV+CG + +
Sbjct: 3118 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-----------RVIQVACGSRDAQTL 3166
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A+++ G V++WG G G+LG + + +P+ + L+G + + CG S ALT
Sbjct: 3167 ALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTKS 3223
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLV 359
G ++ WG +LG G SD + R ++ G ++V A G H L
Sbjct: 3224 GVVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3271
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
G+++ WG N +GQ N +T P+ V G+ + ++A G HS
Sbjct: 3272 VTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3322
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3068 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 3119
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 3120 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 3172
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 3173 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3229
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV+++G+VY
Sbjct: 3230 GKGDYFRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDSGQVYA 3280
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3281 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3326
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 3007 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQI-----TALSSYVVKKVAVHSGGRHATA 3061
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+
Sbjct: 3062 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------ 3115
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 3116 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3169
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 3170 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 3220
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH S K P+ V L G I VA G +H A+T G
Sbjct: 3221 TKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDSGQ 3277
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 3278 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3324
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 144/327 (44%), Gaps = 50/327 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +D+A G H+A V + G
Sbjct: 4060 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRGIEV--VDVAAGGAHSACVTAAGD 4111
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG E + P+ V+ LQ V I+CG+ + +D T+
Sbjct: 4112 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC--LTDDDTV--- 4166
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 4167 --WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4224
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 4225 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4275
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G + VACG H+ AW S+
Sbjct: 4276 NDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAWSTSKPAS 4323
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPIL 341
G P + +P E + + + IPI+
Sbjct: 4324 AGKLP-----AQVPMEYN-HLQEIPII 4344
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 174/411 (42%), Gaps = 76/411 (18%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P C A A R + + G + AV +DG
Sbjct: 3954 IYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALATLRPVQLIGGEQTLFAVTADG 4004
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 4005 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE------- 4057
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG+ + PR+ + V+ G H ++ G L
Sbjct: 4058 ---GEVYSWGEAEDGKLGHGNRSPCDRPRVIES--LRGIEVVDVAAGGAHSACVTAAGDL 4112
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSEN 246
WG YG+LG + + L+ P+++ EA + ++ ++C G+ + ++++
Sbjct: 4113 YTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVVDIACGSGDAQTLCLTDD 4163
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4164 DTVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 4220
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTL 358
WG +LG G SD + R P VQ +A G H +
Sbjct: 4221 WGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCV 4262
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
DG ++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4263 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4313
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 129/276 (46%), Gaps = 25/276 (9%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N + P+L G + N + H +AL+ G + +WG + G+LG G
Sbjct: 471 RVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG 530
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P+VI ++ + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 531 DTVP-LEEPKVISAFSG----KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 585
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + E +P V L G+ + DVACG + A+T G +++WG G+LG G
Sbjct: 586 ---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 642
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D V V CG ++ +DG+++ WG +
Sbjct: 643 DGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 690
Query: 379 NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ + YP ++ G +V +AAG H L +
Sbjct: 691 HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 124/253 (49%), Gaps = 30/253 (11%)
Query: 134 ENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N +GS + + QV+ GS + A++
Sbjct: 2952 ESAATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + A G G+LG GI+ + PR I + ++ K V G H+ A++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYV------VKKVAVHSGGRHATALTV 3064
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS ALTS G LY
Sbjct: 3065 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELY 3121
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRD 363
WG + G+LG G T L P + + +L+ +Q VACG + TL +
Sbjct: 3122 TWGLGEYGRLGHGDNTT--QLKP-------KMVKVLLGHRVIQ-VACGSRDAQTLALTDE 3171
Query: 364 GRIHGWGYNSYGQ 376
G + WG +G+
Sbjct: 3172 GLVFSWGDGDFGK 3184
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 134/310 (43%), Gaps = 53/310 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHC 125
+ G +H A++S+G +++WG E G+LG G P ++ L+ E V + GAH
Sbjct: 4044 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4103
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCG 175
A L+ WG+ + P+L A + ++ ++CG
Sbjct: 4104 ACVTA----------AGDLYTWGKGRYGRLGHSDSEDQLKPKLV-EALQGHRVV-DIACG 4151
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + L++ + +WG +YG+LGRG +G + P I + +V
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVKV 4202
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G VYTWG G +LGH S D PR+V L G + +A G +
Sbjct: 4203 ECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSL 4259
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLV 350
H T G +Y WG + GQLG G T P LV V V
Sbjct: 4260 HCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRV 4306
Query: 351 ACGHSHTLVY 360
ACG +HTL +
Sbjct: 4307 ACGSAHTLAW 4316
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 45/285 (15%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+L A N + H A+A+ G +++WG + G+LG G + P+ +
Sbjct: 482 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVI 541
Query: 109 KQLQ----SEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT 164
+ V I+CG+ +AAI E L+ WG+ N+ RL G+
Sbjct: 542 SAFSGKQAGKHVVHIACGSTYSAAITAEGE---------LYTWGRG---NYGRLGHGSSE 589
Query: 165 PNTI-----------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
I + V+CGS +A++E G + +WG +YG+LGRG +G + P
Sbjct: 590 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTP 648
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
++I+ + +V CG S A++++G+VY+WG G +LGH G +E
Sbjct: 649 KLIEKLQDL--------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH-----GTEE 695
Query: 272 LL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ P+ + L G + DVA G H ALT +++WG + Q
Sbjct: 696 HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 136/293 (46%), Gaps = 33/293 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG G+ G G L PK + G AG + + IACG ++AA
Sbjct: 510 LAATGEVYSWGCGDGGRLGH-GDTVPLEEPKVIS-AFSGKQAGKHV--VHIACGSTYSAA 565
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E P V L+ V ++CG+ +A
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA------ 619
Query: 137 GTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
++W WG R G TP I + +V CGS +AL++ G +
Sbjct: 620 -VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQV 678
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG + +LG G T E ++ P++++G + +K+ V+ G H A++E+ E
Sbjct: 679 YSWGKGDNQRLGHG-TEEHVRYPKLLEGL--------QGKKVIDVAAGSTHCLALTEDSE 729
Query: 249 VYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
V++W GS Q H +L+ E P + LD I +ACG S A +S
Sbjct: 730 VHSW--GSNDQCQHFDTLRVTKPE--PAALPGLDTKHIVGIACGPAQSFAWSS 778
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 139/340 (40%), Gaps = 63/340 (18%)
Query: 56 CPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
C AN IAC + ++ +G ++T N P+ V+ L S
Sbjct: 445 CEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRN 494
Query: 116 VKSISCGA--HCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAF 163
+ I+ + H A+A +T ++ WG G P++ AF
Sbjct: 495 IVKIAAHSDGHHYLALA---------ATGEVYSWGCGDGGRLGHGDTVPLEEPKVI-SAF 544
Query: 164 TPNTI---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF 220
+ + ++CGS + A++ G L WG YG+LG G + E P ++ G
Sbjct: 545 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-SSEDEAIPMLVAGLKGL 603
Query: 221 LDEAPELEKITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
K+ V+CG + + AV+ENG+V++WG G G+LG D P+ +
Sbjct: 604 --------KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR---GGSDGCKTPKLIE 652
Query: 279 ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
L + + V CG S ALT G +Y+WG +LG G ++ + R
Sbjct: 653 KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG------------TEEHVRYP 700
Query: 339 PILVVPNGVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+L G ++ VA G +H L D +H WG N Q
Sbjct: 701 KLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 110/281 (39%), Gaps = 69/281 (24%)
Query: 186 GLLQAWGYNEYGQLGRGI---------TCEGLQGPRVIK--------------------G 216
G + WG+N GQLG GI CE L R ++ G
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010
Query: 217 Y----------AKFLDEAPELEKITQ-------VSCGEYHSAAVSENGEVYTWGLGSVGQ 259
Y + + LE I V+ G H A+S GEVY+WG G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LGH + D+ PR + +L GI + DVA GG HS +T+ G LY WG + G+LG
Sbjct: 4071 LGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG--- 4124
Query: 320 QTRSFSLIPNESDTYFRNIPILVVP---NGVQLVAC--GHSHTLVYMRDGRIHGWGYNSY 374
SD+ + P LV + V +AC G + TL D + WG Y
Sbjct: 4125 ----------HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDY 4174
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADA 414
G+ S P +D G V K+ G S L +
Sbjct: 4175 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4215
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG + G G + +R P+Q+ + + IA G H DG
Sbjct: 4217 AVYTWGKGDYHRLGH-GSDDHVRRPRQVQ-------GLQGKKVIAIATGSLHCVCCTEDG 4268
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
++TWG N+ GQLGDGT + P V LQ + V ++CG+ T A
Sbjct: 4269 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 74/186 (39%), Gaps = 22/186 (11%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+TQ++C E +S NG VYT S L P+ V L I +A
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------------DTLAPQLVQGLASRNIVKIA 499
Query: 290 C--GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
G H AL + G +Y+WG G+LG G +P E V
Sbjct: 500 AHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPLEEPKVISAFSGKQAGKHV 553
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGG 406
+ACG +++ +G ++ WG +YG+ + S P V G +V +A G G
Sbjct: 554 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSG 613
Query: 407 HSAVLA 412
+ LA
Sbjct: 614 DAQTLA 619
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 82/218 (37%), Gaps = 62/218 (28%)
Query: 246 NGEVYTWGLGSVGQLG--------------------HCSLQSGDKELL------------ 273
+G +Y WG GQLG L G++ L
Sbjct: 3951 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010
Query: 274 -----------------PRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWGGSQAGQ 314
P + ++ +FIK VA GG H AL+S+G +Y+WG ++ G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LG G RS P ++ R I ++ VA G +H+ G ++ WG Y
Sbjct: 4071 LGHG--NRSPCDRPRVIES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRY 4120
Query: 375 GQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
G+ + S P V+ G V +A G G + L
Sbjct: 4121 GRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTL 4158
>gi|348528302|ref|XP_003451657.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Oreochromis
niloticus]
Length = 531
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 139/304 (45%), Gaps = 39/304 (12%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ +D +F +G N LG G P+K+ L V S+S G+ +A D
Sbjct: 37 ITNDDEVFVFGLNCSNCLGTGDSLSTIVPKKLDFLSGRKVVSLSYGSGPHILLAT---ED 93
Query: 137 GTISTSRLWVWGQNQGSNFPR---------LFWGAFTPNTIICQVSCGSVHVVALSECGL 187
G L+ WG N S + A N + +V+CGS H +AL++ G
Sbjct: 94 G-----ELFAWGHNGYSQLGNGTTNQGVAPVLVSANLLNKKVTEVACGSHHSMALTDTGE 148
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWGYN GQ+G G T RV + + + CG+ S AV +NG
Sbjct: 149 VYAWGYNNCGQVGSGSTANQPTPRRV--------SSCLQNKVAVSIVCGQTSSLAVVDNG 200
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
EVY WG GQLG L + ++ P R+V L G+ ++ + G HS ALT +G LYAW
Sbjct: 201 EVYGWGYNGNGQLG---LGNNGNQVTPCRLVGLQGLCVQQIVSGYAHSMALTDEGLLYAW 257
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRI 366
G + GQLG G ++ S P + T I V++ AC +HT + G++
Sbjct: 258 GANTYGQLGTGNKSNQLS--PVQILTEKERI--------VEIAACHSTHTSAAKTQSGQV 307
Query: 367 HGWG 370
+ WG
Sbjct: 308 YMWG 311
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 141/336 (41%), Gaps = 50/336 (14%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G +A I ++V+G N S G G +PK+L +G L
Sbjct: 26 VFGSSANEAIYITNDDEVFVFGLNCSNCLG-TGDSLSTIVPKKLD-----FLSGRKVVSL 79
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAH 124
G H DG LF WG N + QLG+GT P V L ++ V ++CG+H
Sbjct: 80 SYGSG-PHILLATEDGELFAWGHNGYSQLGNGTTNQGVAPVLVSANLLNKKVTEVACGSH 138
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQ------GSN----FPRLFWGAFTPNTIICQVSC 174
+ A+ + T ++ WG N GS PR + N + + C
Sbjct: 139 HSMALTD---------TGEVYAWGYNNCGQVGSGSTANQPTPRRV-SSCLQNKVAVSIVC 188
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVI--KGYAKFLDEAPELEKITQ 232
G +A+ + G + WGYN GQLG G + R++ +G + Q
Sbjct: 189 GQTSSLAVVDNGEVYGWGYNGNGQLGLGNNGNQVTPCRLVGLQGLC-----------VQQ 237
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVAC 290
+ G HS A+++ G +Y WG + GQLG +G+K +L P +++ ++ AC
Sbjct: 238 IVSGYAHSMALTDEGLLYAWGANTYGQLG-----TGNKSNQLSPVQILTEKERIVEIAAC 292
Query: 291 GGVH-SCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
H S A T G +Y WG + GQ + P F+
Sbjct: 293 HSTHTSAAKTQSGQVYMWGQCR-GQSIVLPHLTHFA 327
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHSCA 297
H +E+GE++ WG QLG+ + G + P V A L + +VACG HS A
Sbjct: 86 HILLATEDGELFAWGHNGYSQLGNGTTNQG---VAPVLVSANLLNKKVTEVACGSHHSMA 142
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRN-IPILVVPNGVQLVACGHSH 356
LT G +YAWG + GQ+G G + P + +N + + +V CG +
Sbjct: 143 LTDTGEVYAWGYNNCGQVGSGSTANQPT--PRRVSSCLQNKVAVSIV--------CGQTS 192
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLAD 413
+L + +G ++GWGYN GQ + P + G V+++ +G HS L D
Sbjct: 193 SLAVVDNGEVYGWGYNGNGQLGLGNNGNQVTPCRLVGLQGLCVQQIVSGYAHSMALTD 250
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 68/150 (45%), Gaps = 18/150 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WGYN +GQ G Q+ P L G + I G+ H+ A+ +G
Sbjct: 202 VYGWGYNGNGQLGLGNNGNQVT-----PCRLVGLQGLCVQQ---IVSGYAHSMALTDEGL 253
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+ WGAN +GQLG G + + P ++ + V+ +C + T+A +
Sbjct: 254 LYAWGANTYGQLGTGNKSNQLSPVQILTEKERIVEIAACHSTHTSA--------AKTQSG 305
Query: 143 RLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
++++WGQ +G + P L A T + C
Sbjct: 306 QVYMWGQCRGQSIVLPHLTHFACTDDVFAC 335
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 78/177 (44%), Gaps = 25/177 (14%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACG-GVHSCALT 299
++ + EV+ +GL LG +GD ++P+++ L G + ++ G G H T
Sbjct: 37 ITNDDEVFVFGLNCSNCLG-----TGDSLSTIVPKKLDFLSGRKVVSLSYGSGPHILLAT 91
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN----GVQLVACGHS 355
G L+AWG + QLG G + + P+LV N V VACG
Sbjct: 92 EDGELFAWGHNGYSQLGNGTTNQGVA-------------PVLVSANLLNKKVTEVACGSH 138
Query: 356 HTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
H++ G ++ WGYN+ GQ + + P V C+ ++ G ++ LA
Sbjct: 139 HSMALTDTGEVYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNKVAVSIVCGQTSSLA 195
>gi|410223230|gb|JAA08834.1| hect domain and RLD 2 [Pan troglodytes]
gi|410304312|gb|JAA30756.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 176/411 (42%), Gaps = 67/411 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
++ ++VWG N Q G L+ K P + N + +A G + AV
Sbjct: 2958 RTKVFVWGLNDKDQLG------GLKGSKIKVPSFSETLSALNV--VQVAGGSKSLFAVTV 3009
Query: 80 DGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPREN 135
+G ++ G G+LG G G P ++ L S VK ++ G H TA
Sbjct: 3010 EGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV----- 3064
Query: 136 DGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
DG +++ WG+ PRL T I ++CGS H AL+
Sbjct: 3065 DG-----KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSS 3117
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGP--RVIKGYAKFLDEAPELEKITQVSCG--EYHSA 241
G L WG EYG+LG G L+ +V+ G+ ++ QV+CG + +
Sbjct: 3118 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-----------RVIQVACGSRDAQTL 3166
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A+++ G V++WG G G+LG + + +P+ + L+G + + CG S ALT
Sbjct: 3167 ALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTKS 3223
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLV 359
G ++ WG +LG G SD + R ++ G ++V A G H L
Sbjct: 3224 GVVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3271
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
G+++ WG N +GQ N +T P+ V G+ + ++A G HS
Sbjct: 3272 VTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3322
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3068 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 3119
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 3120 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 3172
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 3173 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3229
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV+++G+VY
Sbjct: 3230 GKGDYFRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDSGQVYA 3280
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3281 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3326
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 3007 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQI-----TALSSYVVKKVAVHSGGRHATA 3061
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+
Sbjct: 3062 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------ 3115
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 3116 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3169
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 3170 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 3220
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH S K P+ V L G I VA G +H A+T G
Sbjct: 3221 TKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDSGQ 3277
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 3278 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3324
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 144/327 (44%), Gaps = 50/327 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +D+A G H+A V + G
Sbjct: 4060 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRGIEV--VDVAAGGAHSACVTAAGD 4111
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG E + P+ V+ LQ V I+CG+ + +D T+
Sbjct: 4112 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC--LTDDDTV--- 4166
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 4167 --WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4224
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 4225 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4275
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G + VACG H+ AW S+
Sbjct: 4276 NDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAWSTSKPAS 4323
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPIL 341
G P + +P E + + + IPI+
Sbjct: 4324 AGKLP-----AQVPMEYN-HLQEIPII 4344
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 174/411 (42%), Gaps = 76/411 (18%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P C A A R + + G + AV +DG
Sbjct: 3954 IYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALATLRPVQLIGGEQTLFAVTADG 4004
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 4005 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE------- 4057
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG+ + PR+ + V+ G H ++ G L
Sbjct: 4058 ---GEVYSWGEAEDGKLGHGNRSPCDRPRVIES--LRGIEVVDVAAGGAHSACVTAAGDL 4112
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSEN 246
WG YG+LG + + L+ P+++ EA + ++ ++C G+ + ++++
Sbjct: 4113 YTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVVDIACGSGDAQTLCLTDD 4163
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4164 DTVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 4220
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTL 358
WG +LG G SD + R P VQ +A G H +
Sbjct: 4221 WGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCV 4262
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
DG ++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4263 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4313
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 129/276 (46%), Gaps = 25/276 (9%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N + P+L G + N + H +AL+ G + +WG + G+LG G
Sbjct: 471 RVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG 530
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P+VI ++ + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 531 DTVP-LEEPKVISAFSG----KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 585
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + E +P V L G+ + DVACG + A+T G +++WG G+LG G
Sbjct: 586 ---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 642
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D V V CG ++ +DG+++ WG +
Sbjct: 643 DGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 690
Query: 379 NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ + YP ++ G +V +AAG H L +
Sbjct: 691 HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 124/253 (49%), Gaps = 30/253 (11%)
Query: 134 ENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N +GS + + QV+ GS + A++
Sbjct: 2952 ESAATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + A G G+LG GI+ + PR I + ++ K V G H+ A++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYV------VKKVAVHSGGRHATALTV 3064
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS ALTS G LY
Sbjct: 3065 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELY 3121
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRD 363
WG + G+LG G T L P + + +L+ +Q VACG + TL +
Sbjct: 3122 TWGLGEYGRLGHGDNTT--QLKP-------KMVKVLLGHRVIQ-VACGSRDAQTLALTDE 3171
Query: 364 GRIHGWGYNSYGQ 376
G + WG +G+
Sbjct: 3172 GLVFSWGDGDFGK 3184
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 134/310 (43%), Gaps = 53/310 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHC 125
+ G +H A++S+G +++WG E G+LG G P ++ L+ E V + GAH
Sbjct: 4044 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4103
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCG 175
A L+ WG+ + P+L A + ++ ++CG
Sbjct: 4104 ACVTA----------AGDLYTWGKGRYGRLGHSDSEDQLKPKLV-EALQGHRVV-DIACG 4151
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + L++ + +WG +YG+LGRG +G + P I + +V
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVKV 4202
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G VYTWG G +LGH S D PR+V L G + +A G +
Sbjct: 4203 ECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSL 4259
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLV 350
H T G +Y WG + GQLG G T P LV V V
Sbjct: 4260 HCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRV 4306
Query: 351 ACGHSHTLVY 360
ACG +HTL +
Sbjct: 4307 ACGSAHTLAW 4316
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 45/285 (15%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+L A N + H A+A+ G +++WG + G+LG G + P+ +
Sbjct: 482 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVI 541
Query: 109 KQLQ----SEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT 164
+ V I+CG+ +AAI E L+ WG+ N+ RL G+
Sbjct: 542 SAFSGKQAGKHVVHIACGSTYSAAITAEGE---------LYTWGRG---NYGRLGHGSSE 589
Query: 165 PNTI-----------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
I + V+CGS +A++E G + +WG +YG+LGRG +G + P
Sbjct: 590 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTP 648
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
++I+ + +V CG S A++++G+VY+WG G +LGH G +E
Sbjct: 649 KLIEKLQDL--------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH-----GTEE 695
Query: 272 LL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ P+ + L G + DVA G H ALT +++WG + Q
Sbjct: 696 HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 136/293 (46%), Gaps = 33/293 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG G+ G G L PK + G AG + + IACG ++AA
Sbjct: 510 LAATGEVYSWGCGDGGRLGH-GDTVPLEEPKVIS-AFSGKQAGKHV--VHIACGSTYSAA 565
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E P V L+ V ++CG+ +A
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA------ 619
Query: 137 GTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
++W WG R G TP I + +V CGS +AL++ G +
Sbjct: 620 -VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQV 678
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG + +LG G T E ++ P++++G + +K+ V+ G H A++E+ E
Sbjct: 679 YSWGKGDNQRLGHG-TEEHVRYPKLLEGL--------QGKKVIDVAAGSTHCLALTEDSE 729
Query: 249 VYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
V++W GS Q H +L+ E P + LD I +ACG S A +S
Sbjct: 730 VHSW--GSNDQCQHFDTLRVTKPE--PAALPGLDTKHIVGIACGPAQSFAWSS 778
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 139/340 (40%), Gaps = 63/340 (18%)
Query: 56 CPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
C AN IAC + ++ +G ++T N P+ V+ L S
Sbjct: 445 CEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRN 494
Query: 116 VKSISCGA--HCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAF 163
+ I+ + H A+A +T ++ WG G P++ AF
Sbjct: 495 IVKIAAHSDGHHYLALA---------ATGEVYSWGCGDGGRLGHGDTVPLEEPKVI-SAF 544
Query: 164 TPNTI---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF 220
+ + ++CGS + A++ G L WG YG+LG G + E P ++ G
Sbjct: 545 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-SSEDEAIPMLVAGLKGL 603
Query: 221 LDEAPELEKITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
K+ V+CG + + AV+ENG+V++WG G G+LG D P+ +
Sbjct: 604 --------KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR---GGSDGCKTPKLIE 652
Query: 279 ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
L + + V CG S ALT G +Y+WG +LG G ++ + R
Sbjct: 653 KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG------------TEEHVRYP 700
Query: 339 PILVVPNGVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+L G ++ VA G +H L D +H WG N Q
Sbjct: 701 KLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 110/281 (39%), Gaps = 69/281 (24%)
Query: 186 GLLQAWGYNEYGQLGRGI---------TCEGLQGPRVIK--------------------G 216
G + WG+N GQLG GI CE L R ++ G
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010
Query: 217 Y----------AKFLDEAPELEKITQ-------VSCGEYHSAAVSENGEVYTWGLGSVGQ 259
Y + + LE I V+ G H A+S GEVY+WG G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LGH + D+ PR + +L GI + DVA GG HS +T+ G LY WG + G+LG
Sbjct: 4071 LGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG--- 4124
Query: 320 QTRSFSLIPNESDTYFRNIPILVVP---NGVQLVAC--GHSHTLVYMRDGRIHGWGYNSY 374
SD+ + P LV + V +AC G + TL D + WG Y
Sbjct: 4125 ----------HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDY 4174
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADA 414
G+ S P +D G V K+ G S L +
Sbjct: 4175 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4215
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG + G G + +R P+Q+ + + IA G H DG
Sbjct: 4217 AVYTWGKGDYHRLGH-GSDDHVRRPRQVQ-------GLQGKKVIAIATGSLHCVCCTEDG 4268
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
++TWG N+ GQLGDGT + P V LQ + V ++CG+ T A
Sbjct: 4269 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 74/186 (39%), Gaps = 22/186 (11%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+TQ++C E +S NG VYT S L P+ V L I +A
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------------DTLAPQLVQGLASRNIVKIA 499
Query: 290 C--GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
G H AL + G +Y+WG G+LG G +P E V
Sbjct: 500 AHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPLEEPKVISAFSGKQAGKHV 553
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGG 406
+ACG +++ +G ++ WG +YG+ + S P V G +V +A G G
Sbjct: 554 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSG 613
Query: 407 HSAVLA 412
+ LA
Sbjct: 614 DAQTLA 619
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 82/218 (37%), Gaps = 62/218 (28%)
Query: 246 NGEVYTWGLGSVGQLG--------------------HCSLQSGDKELL------------ 273
+G +Y WG GQLG L G++ L
Sbjct: 3951 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010
Query: 274 -----------------PRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWGGSQAGQ 314
P + ++ +FIK VA GG H AL+S+G +Y+WG ++ G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LG G RS P ++ R I ++ VA G +H+ G ++ WG Y
Sbjct: 4071 LGHG--NRSPCDRPRVIES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRY 4120
Query: 375 GQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
G+ + S P V+ G V +A G G + L
Sbjct: 4121 GRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTL 4158
>gi|357466661|ref|XP_003603615.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355492663|gb|AES73866.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 563
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 187/419 (44%), Gaps = 77/419 (18%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANS--RWLDIACGHEHTAAVAS 79
++Y WG G+ G ++ +L PK+L FG P G + + IA G HT A+A
Sbjct: 35 SVYCWGRGMFGRLGNGSQKDEL-FPKKLN---FGNPNGTQDSVKIVGIAAGSYHTLALAE 90
Query: 80 DGTLFTWGANEFGQLG----DGTEEGRKHPEKVKQLQSEFVKSIS-CGAHCTAAIAEPRE 134
DG+++ W + L E + H ++E S+ C ++ +
Sbjct: 91 DGSVWCWEEDSHDSLVPCLLSRFLELQPHNSSTDPSEAEDKASLEMCTVKAGGMMSLAID 150
Query: 135 NDGTISTSRLWVWGQNQGSNFPR-------LFWGAFTPNTI-------ICQVSCGSVHVV 180
N GT LW+WG N P+ +FTP + + +V+CG+ HVV
Sbjct: 151 NRGT-----LWMWG-----NIPQESKESGISLVSSFTPTPVWDFHGRTVVKVACGNEHVV 200
Query: 181 AL--------SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
AL E L +WGYN +GQLG G L P V+K LDE I +
Sbjct: 201 ALVNAIDSHEDEDLLCYSWGYNSHGQLGLGDRQSRLH-PEVVK----ILDEESPW-TIYE 254
Query: 233 VSCGEYHSAAVSENGE--------VYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL-DGI 283
V+CG +H+A ++ + +T+GLG GQLGH + QS L P V L I
Sbjct: 255 VACGAFHTALLAHKKKPDATLESMCWTFGLGENGQLGHGTTQS---TLFPTPVKELPQSI 311
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI-PILV 342
+ V CG H+ ++S G +++WG + LGL P E+++ + P+L+
Sbjct: 312 HLISVDCGLFHTSVVSSTGDVWSWGMEKG--LGLCPDANR-----AETNSGGDALSPLLI 364
Query: 343 VPN-------GVQLVACGHSHTLVYMRDG-RIHGWGYNSYGQAANEKSTYAWYPSPVDW 393
N G VACG +HT+V ++G ++ WG G N K ++ P+ V W
Sbjct: 365 SCNLHQPIFPGPVKVACGAAHTVVVAQEGHKVWSWGRGRSGVLGNGKEMDSYTPTIVPW 423
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 123/292 (42%), Gaps = 45/292 (15%)
Query: 165 PNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
P+ I V+ G H + L+E G + WG +G+LG G + L ++ G ++
Sbjct: 13 PSHKIVDVAAGESHTLLLTEDGSVYCWGRGMFGRLGNGSQKDELFPKKLNFGNPNGTQDS 72
Query: 225 PELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHC------SLQSGDKELLPRRVV 278
KI ++ G YH+ A++E+G V+ W S L C LQ + P
Sbjct: 73 ---VKIVGIAAGSYHTLALAEDGSVWCWEEDSHDSLVPCLLSRFLELQPHNSSTDPSEAE 129
Query: 279 ALDGIFIKDVACGGVHSCALTSKGALYAWGG--SQAGQLGLGPQTRSFSLIPNESDTYFR 336
+ + V GG+ S A+ ++G L+ WG ++ + G+ SF+ P D + R
Sbjct: 130 DKASLEMCTVKAGGMMSLAIDNRGTLWMWGNIPQESKESGIS-LVSSFTPTP-VWDFHGR 187
Query: 337 NIPILVVPNGVQLVACGHSHTLVYM--------RDGRIHGWGYNSYGQAANEKSTYAWYP 388
V VACG+ H + + D + WGYNS+GQ +P
Sbjct: 188 T---------VVKVACGNEHVVALVNAIDSHEDEDLLCYSWGYNSHGQLGLGDRQSRLHP 238
Query: 389 SPVD-------WCVGEVRKLAAGGGHSAVLADA----CSLKELC-EFRLAES 428
V W + EV A G H+A+LA +L+ +C F L E+
Sbjct: 239 EVVKILDEESPWTIYEV---ACGAFHTALLAHKKKPDATLESMCWTFGLGEN 287
>gi|126032348|ref|NP_004658.3| E3 ubiquitin-protein ligase HERC2 [Homo sapiens]
gi|308153453|sp|O95714.2|HERC2_HUMAN RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
domain and RCC1-like domain-containing protein 2
Length = 4834
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 176/411 (42%), Gaps = 67/411 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
++ ++VWG N Q G L+ K P + N + +A G + AV
Sbjct: 2958 RTKVFVWGLNDKDQLG------GLKGSKIKVPSFSETLSALNV--VQVAGGSKSLFAVTV 3009
Query: 80 DGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPREN 135
+G ++ G G+LG G G P ++ L S VK ++ G H TA
Sbjct: 3010 EGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV----- 3064
Query: 136 DGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
DG +++ WG+ PRL T I ++CGS H AL+
Sbjct: 3065 DG-----KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSS 3117
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGP--RVIKGYAKFLDEAPELEKITQVSCG--EYHSA 241
G L WG EYG+LG G L+ +V+ G+ ++ QV+CG + +
Sbjct: 3118 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-----------RVIQVACGSRDAQTL 3166
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A+++ G V++WG G G+LG + + +P+ + L+G + + CG S ALT
Sbjct: 3167 ALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTKS 3223
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLV 359
G ++ WG +LG G SD + R ++ G ++V A G H L
Sbjct: 3224 GVVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3271
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
G+++ WG N +GQ N +T P+ V G+ + ++A G HS
Sbjct: 3272 VTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3322
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3068 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 3119
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 3120 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 3172
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 3173 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3229
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV+++G+VY
Sbjct: 3230 GKGDYFRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDSGQVYA 3280
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3281 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3326
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 3007 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQI-----TALSSYVVKKVAVHSGGRHATA 3061
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+
Sbjct: 3062 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------ 3115
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 3116 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3169
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 3170 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 3220
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH S K P+ V L G I VA G +H A+T G
Sbjct: 3221 TKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDSGQ 3277
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 3278 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3324
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 144/327 (44%), Gaps = 50/327 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +D+A G H+A V + G
Sbjct: 4060 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRGIEV--VDVAAGGAHSACVTAAGD 4111
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG E + P+ V+ LQ V I+CG+ + +D T+
Sbjct: 4112 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC--LTDDDTV--- 4166
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 4167 --WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4224
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 4225 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4275
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G + VACG H+ AW S+
Sbjct: 4276 NDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAWSTSKPAS 4323
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPIL 341
G P + +P E + + + IPI+
Sbjct: 4324 AGKLP-----AQVPMEYN-HLQEIPII 4344
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 174/411 (42%), Gaps = 76/411 (18%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P C A A R + + G + AV +DG
Sbjct: 3954 IYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALATLRPVQLIGGEQTLFAVTADG 4004
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 4005 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE------- 4057
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG+ + PR+ + V+ G H ++ G L
Sbjct: 4058 ---GEVYSWGEAEDGKLGHGNRSPCDRPRVIES--LRGIEVVDVAAGGAHSACVTAAGDL 4112
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSEN 246
WG YG+LG + + L+ P+++ EA + ++ ++C G+ + ++++
Sbjct: 4113 YTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVVDIACGSGDAQTLCLTDD 4163
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4164 DTVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 4220
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTL 358
WG +LG G SD + R P VQ +A G H +
Sbjct: 4221 WGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCV 4262
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
DG ++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4263 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4313
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 129/276 (46%), Gaps = 25/276 (9%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N + P+L G + N + H +AL+ G + +WG + G+LG G
Sbjct: 471 RVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG 530
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P+VI ++ + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 531 DTVP-LEEPKVISAFSG----KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 585
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + E +P V L G+ + DVACG + A+T G +++WG G+LG G
Sbjct: 586 ---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 642
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D V V CG ++ +DG+++ WG +
Sbjct: 643 DGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 690
Query: 379 NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ + YP ++ G +V +AAG H L +
Sbjct: 691 HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 124/253 (49%), Gaps = 30/253 (11%)
Query: 134 ENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N +GS + + QV+ GS + A++
Sbjct: 2952 ESAATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + A G G+LG GI+ + PR I + ++ K V G H+ A++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYV------VKKVAVHSGGRHATALTV 3064
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS ALTS G LY
Sbjct: 3065 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELY 3121
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRD 363
WG + G+LG G T L P + + +L+ +Q VACG + TL +
Sbjct: 3122 TWGLGEYGRLGHGDNTT--QLKP-------KMVKVLLGHRVIQ-VACGSRDAQTLALTDE 3171
Query: 364 GRIHGWGYNSYGQ 376
G + WG +G+
Sbjct: 3172 GLVFSWGDGDFGK 3184
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 134/310 (43%), Gaps = 53/310 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHC 125
+ G +H A++S+G +++WG E G+LG G P ++ L+ E V + GAH
Sbjct: 4044 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4103
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCG 175
A L+ WG+ + P+L A + ++ ++CG
Sbjct: 4104 ACVTA----------AGDLYTWGKGRYGRLGHSDSEDQLKPKLV-EALQGHRVV-DIACG 4151
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + L++ + +WG +YG+LGRG +G + P I + +V
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVKV 4202
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G VYTWG G +LGH S D PR+V L G + +A G +
Sbjct: 4203 ECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSL 4259
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLV 350
H T G +Y WG + GQLG G T P LV V V
Sbjct: 4260 HCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRV 4306
Query: 351 ACGHSHTLVY 360
ACG +HTL +
Sbjct: 4307 ACGSAHTLAW 4316
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 45/285 (15%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+L A N + H A+A+ G +++WG + G+LG G + P+ +
Sbjct: 482 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVI 541
Query: 109 KQLQ----SEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT 164
+ V I+CG+ +AAI E L+ WG+ N+ RL G+
Sbjct: 542 SAFSGKQAGKHVVHIACGSTYSAAITAEGE---------LYTWGRG---NYGRLGHGSSE 589
Query: 165 PNTI-----------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
I + V+CGS +A++E G + +WG +YG+LGRG +G + P
Sbjct: 590 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTP 648
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
++I+ + +V CG S A++++G+VY+WG G +LGH G +E
Sbjct: 649 KLIEKLQDL--------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH-----GTEE 695
Query: 272 LL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ P+ + L G + DVA G H ALT +++WG + Q
Sbjct: 696 HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 136/293 (46%), Gaps = 33/293 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG G+ G G L PK + G AG + + IACG ++AA
Sbjct: 510 LAATGEVYSWGCGDGGRLGH-GDTVPLEEPKVIS-AFSGKQAGKHV--VHIACGSTYSAA 565
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E P V L+ V ++CG+ +A
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA------ 619
Query: 137 GTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
++W WG R G TP I + +V CGS +AL++ G +
Sbjct: 620 -VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQV 678
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG + +LG G T E ++ P++++G + +K+ V+ G H A++E+ E
Sbjct: 679 YSWGKGDNQRLGHG-TEEHVRYPKLLEGL--------QGKKVIDVAAGSTHCLALTEDSE 729
Query: 249 VYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
V++W GS Q H +L+ E P + LD I +ACG S A +S
Sbjct: 730 VHSW--GSNDQCQHFDTLRVTKPE--PAALPGLDTKHIVGIACGPAQSFAWSS 778
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 139/340 (40%), Gaps = 63/340 (18%)
Query: 56 CPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
C AN IAC + ++ +G ++T N P+ V+ L S
Sbjct: 445 CEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRN 494
Query: 116 VKSISCGA--HCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAF 163
+ I+ + H A+A +T ++ WG G P++ AF
Sbjct: 495 IVKIAAHSDGHHYLALA---------ATGEVYSWGCGDGGRLGHGDTVPLEEPKVI-SAF 544
Query: 164 TPNTI---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF 220
+ + ++CGS + A++ G L WG YG+LG G + E P ++ G
Sbjct: 545 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-SSEDEAIPMLVAGLKGL 603
Query: 221 LDEAPELEKITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
K+ V+CG + + AV+ENG+V++WG G G+LG D P+ +
Sbjct: 604 --------KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR---GGSDGCKTPKLIE 652
Query: 279 ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
L + + V CG S ALT G +Y+WG +LG G ++ + R
Sbjct: 653 KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG------------TEEHVRYP 700
Query: 339 PILVVPNGVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+L G ++ VA G +H L D +H WG N Q
Sbjct: 701 KLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 110/281 (39%), Gaps = 69/281 (24%)
Query: 186 GLLQAWGYNEYGQLGRGI---------TCEGLQGPRVIK--------------------G 216
G + WG+N GQLG GI CE L R ++ G
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010
Query: 217 Y----------AKFLDEAPELEKITQ-------VSCGEYHSAAVSENGEVYTWGLGSVGQ 259
Y + + LE I V+ G H A+S GEVY+WG G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LGH + D+ PR + +L GI + DVA GG HS +T+ G LY WG + G+LG
Sbjct: 4071 LGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG--- 4124
Query: 320 QTRSFSLIPNESDTYFRNIPILVVP---NGVQLVAC--GHSHTLVYMRDGRIHGWGYNSY 374
SD+ + P LV + V +AC G + TL D + WG Y
Sbjct: 4125 ----------HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDY 4174
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADA 414
G+ S P +D G V K+ G S L +
Sbjct: 4175 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4215
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG + G G + +R P+Q+ + + IA G H DG
Sbjct: 4217 AVYTWGKGDYHRLGH-GSDDHVRRPRQVQ-------GLQGKKVIAIATGSLHCVCCTEDG 4268
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
++TWG N+ GQLGDGT + P V LQ + V ++CG+ T A
Sbjct: 4269 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 74/186 (39%), Gaps = 22/186 (11%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+TQ++C E +S NG VYT S L P+ V L I +A
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------------DTLAPQLVQGLASRNIVKIA 499
Query: 290 C--GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
G H AL + G +Y+WG G+LG G +P E V
Sbjct: 500 AHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPLEEPKVISAFSGKQAGKHV 553
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGG 406
+ACG +++ +G ++ WG +YG+ + S P V G +V +A G G
Sbjct: 554 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSG 613
Query: 407 HSAVLA 412
+ LA
Sbjct: 614 DAQTLA 619
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 82/218 (37%), Gaps = 62/218 (28%)
Query: 246 NGEVYTWGLGSVGQLG--------------------HCSLQSGDKELL------------ 273
+G +Y WG GQLG L G++ L
Sbjct: 3951 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010
Query: 274 -----------------PRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWGGSQAGQ 314
P + ++ +FIK VA GG H AL+S+G +Y+WG ++ G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LG G RS P ++ R I ++ VA G +H+ G ++ WG Y
Sbjct: 4071 LGHG--NRSPCDRPRVIES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRY 4120
Query: 375 GQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
G+ + S P V+ G V +A G G + L
Sbjct: 4121 GRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTL 4158
>gi|408794586|ref|ZP_11206191.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
meyeri serovar Hardjo str. Went 5]
gi|408461821|gb|EKJ85551.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
meyeri serovar Hardjo str. Went 5]
Length = 364
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 150/380 (39%), Gaps = 66/380 (17%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++Y WG N+ GQ G L P + + + ++ A+ DG
Sbjct: 4 SLYTWGRNNFGQLGSGTSTGDLTNPTITKLSTI-------ANVVSLGFNQNNSLAITEDG 56
Query: 82 TLFTWGANEFGQLGDG---------TEEG-RKHPEKVKQLQSEFV--------------- 116
+++TWGAN GQLG G T+ G R P KV + + +
Sbjct: 57 SVWTWGANSSGQLGMGNTGDLQTAATDAGPRNPPRKVPGITNAVMGVYGYDHAVVLKSDG 116
Query: 117 KSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGS 176
+S G + + GT S+S + V G PN +I QV GS
Sbjct: 117 TVVSFGLNSVGQLGNGAGGTGTYSSSPVAVIGL---------------PNDVI-QVIAGS 160
Query: 177 VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG 236
H AL++ G + WG ++YG LG G+ + K + P L I ++ G
Sbjct: 161 EHSAALTKSGDVYVWGRDQYGNLGDGVIGTSTEVNSTPK-------KVPSLSGIVHIANG 213
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSC 296
H A+ +G VY WGL S GQLG S P V L + V G S
Sbjct: 214 RDHILALKTDGTVYAWGLASSGQLGIGGTGSPAPVPTPTLVTGLYNVV--SVWANGTQSF 271
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ S G + WG + +G LG G T + P + I+V +Q CG H
Sbjct: 272 AILSDGTVKGWGANSSGNLGTGLTTPAKLYTPGD---------IVVGVRDIQYFGCGALH 322
Query: 357 TLVYMRDGRIHGWGYNSYGQ 376
++ G ++GWG+N G
Sbjct: 323 NFAILKSGSLYGWGWNFKGS 342
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 111/365 (30%), Positives = 156/365 (42%), Gaps = 61/365 (16%)
Query: 80 DGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
+G+L+TWG N FGQLG GT G +P K V S+ + + AI E DG+
Sbjct: 2 NGSLYTWGRNNFGQLGSGTSTGDLTNPTITKLSTIANVVSLGFNQNNSLAITE----DGS 57
Query: 139 ISTSRLWVWGQNQGS--------------------NFPRLFWGAFTPNTIICQVSCGSVH 178
+ W WG N N PR G T G H
Sbjct: 58 V-----WTWGANSSGQLGMGNTGDLQTAATDAGPRNPPRKVPGI----TNAVMGVYGYDH 108
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGL--QGPRVIKGYAKFLDEAPELEKITQVSCG 236
V L G + ++G N GQLG G G P + G + QV G
Sbjct: 109 AVVLKSDGTVVSFGLNSVGQLGNGAGGTGTYSSSPVAVIGLP---------NDVIQVIAG 159
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCSL-QSGDKELLPRRVVALDGIFIKDVACGGVHS 295
HSAA++++G+VY WG G LG + S + P++V +L GI +A G H
Sbjct: 160 SEHSAALTKSGDVYVWGRDQYGNLGDGVIGTSTEVNSTPKKVPSLSGIV--HIANGRDHI 217
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNES-DTYFRNIPILVVPNGVQLVACGH 354
AL + G +YAWG + +GQLG+G T S + +P + T N+ + V NG Q A
Sbjct: 218 LALKTDGTVYAWGLASSGQLGIG-GTGSPAPVPTPTLVTGLYNV-VSVWANGTQSFAI-- 273
Query: 355 SHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG--EVRKLAAGGGHSAVLA 412
+ DG + GWG NS G +T A +P D VG +++ G H+ +
Sbjct: 274 ------LSDGTVKGWGANSSGNLGTGLTTPAKLYTPGDIVVGVRDIQYFGCGALHNFAIL 327
Query: 413 DACSL 417
+ SL
Sbjct: 328 KSGSL 332
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 139/324 (42%), Gaps = 55/324 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRI------PKQLPPELFGCPAGANSRWLDIACG 70
I +++ WG N SGQ G G L+ P+ P ++ G + G
Sbjct: 52 ITEDGSVWTWGANSSGQLGM-GNTGDLQTAATDAGPRNPPRKVPGITNAVMGVY-----G 105
Query: 71 HEHTAAVASDGTLFTWGANEFGQLGD---GTEEGRKHPEKVKQLQSEFVKSISCGAHCTA 127
++H + SDGT+ ++G N GQLG+ GT P V L ++ ++ I G+ +A
Sbjct: 106 YDHAVVLKSDGTVVSFGLNSVGQLGNGAGGTGTYSSSPVAVIGLPNDVIQVI-AGSEHSA 164
Query: 128 AIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGA-----FTPNTI-----ICQVSCGSV 177
A+ + + ++VWG++Q N G TP + I ++ G
Sbjct: 165 ALTKSGD---------VYVWGRDQYGNLGDGVIGTSTEVNSTPKKVPSLSGIVHIANGRD 215
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCE--GLQGPRVIKGYAKFLDEAPELEKITQVSC 235
H++AL G + AWG GQLG G T + P ++ G L + V
Sbjct: 216 HILALKTDGTVYAWGLASSGQLGIGGTGSPAPVPTPTLVTG----------LYNVVSVWA 265
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV---ACGG 292
S A+ +G V WG S G LG L + K P +V + ++D+ CG
Sbjct: 266 NGTQSFAILSDGTVKGWGANSSGNLG-TGLTTPAKLYTPGDIV----VGVRDIQYFGCGA 320
Query: 293 VHSCALTSKGALYAWGGSQAGQLG 316
+H+ A+ G+LY WG + G +G
Sbjct: 321 LHNFAILKSGSLYGWGWNFKGSIG 344
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 95/232 (40%), Gaps = 40/232 (17%)
Query: 50 PPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDG----TEEGRKHP 105
P + G P + + + G EH+AA+ G ++ WG +++G LGDG + E P
Sbjct: 143 PVAVIGLP----NDVIQVIAGSEHSAALTKSGDVYVWGRDQYGNLGDGVIGTSTEVNSTP 198
Query: 106 EKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI------STSRLWVWGQNQGSNF--PR 157
+KV L + I+ G A+ + DGT+ S+ +L + G + P
Sbjct: 199 KKVPSLSG--IVHIANGRDHILAL----KTDGTVYAWGLASSGQLGIGGTGSPAPVPTPT 252
Query: 158 LFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGY 217
L G + + V A+ G ++ WG N G LG G+T
Sbjct: 253 LVTGLYN----VVSVWANGTQSFAILSDGTVKGWGANSSGNLGTGLTTP----------- 297
Query: 218 AKFL---DEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQ 266
AK D + I CG H+ A+ ++G +Y WG G +G LQ
Sbjct: 298 AKLYTPGDIVVGVRDIQYFGCGALHNFAILKSGSLYGWGWNFKGSIGRADLQ 349
>gi|410265952|gb|JAA20942.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 178/412 (43%), Gaps = 69/412 (16%)
Query: 20 KSAIYVWGYNHSGQTG-RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
++ ++VWG N Q G KG + ++ P + N + +A G + AV
Sbjct: 2958 RTKVFVWGLNDKDQLGGLKGSKIKV-------PSFSETLSALNV--VQVAGGSKSLFAVT 3008
Query: 79 SDGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRE 134
+G ++ G G+LG G G P ++ L S VK ++ G H TA
Sbjct: 3009 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV---- 3064
Query: 135 NDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSE 184
DG +++ WG+ PRL T I ++CGS H AL+
Sbjct: 3065 -DG-----KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTS 3116
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGP--RVIKGYAKFLDEAPELEKITQVSCG--EYHS 240
G L WG EYG+LG G L+ +V+ G+ ++ QV+CG + +
Sbjct: 3117 SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-----------RVIQVACGSRDAQT 3165
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
A+++ G V++WG G G+LG + + +P+ + L+G + + CG S ALT
Sbjct: 3166 LALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTK 3222
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTL 358
G ++ WG +LG G SD + R ++ G ++V A G H L
Sbjct: 3223 SGVVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRGKKIVHVAVGALHCL 3270
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
G+++ WG N +GQ N +T P+ V G+ + ++A G HS
Sbjct: 3271 AVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3322
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3068 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 3119
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 3120 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 3172
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 3173 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3229
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV+++G+VY
Sbjct: 3230 GKGDYFRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDSGQVYA 3280
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3281 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3326
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 3007 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQI-----TALSSYVVKKVAVHSGGRHATA 3061
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+
Sbjct: 3062 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------ 3115
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 3116 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3169
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 3170 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 3220
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH S K P+ V L G I VA G +H A+T G
Sbjct: 3221 TKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDSGQ 3277
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 3278 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3324
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 144/327 (44%), Gaps = 50/327 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +D+A G H+A V + G
Sbjct: 4060 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRGIEV--VDVAAGGAHSACVTAAGD 4111
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG E + P+ V+ LQ V I+CG+ + +D T+
Sbjct: 4112 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC--LTDDDTV--- 4166
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 4167 --WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4224
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 4225 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4275
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G + VACG H+ AW S+
Sbjct: 4276 NDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAWSTSKPAS 4323
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPIL 341
G P + +P E + + + IPI+
Sbjct: 4324 AGKLP-----AQVPMEYN-HLQEIPII 4344
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 174/411 (42%), Gaps = 76/411 (18%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P C A A R + + G + AV +DG
Sbjct: 3954 IYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALATLRPVQLIGGEQTLFAVTADG 4004
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 4005 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE------- 4057
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG+ + PR+ + V+ G H ++ G L
Sbjct: 4058 ---GEVYSWGEAEDGKLGHGNRSPCDRPRVIES--LRGIEVVDVAAGGAHSACVTAAGDL 4112
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSEN 246
WG YG+LG + + L+ P+++ EA + ++ ++C G+ + ++++
Sbjct: 4113 YTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVVDIACGSGDAQTLCLTDD 4163
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4164 DTVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 4220
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTL 358
WG +LG G SD + R P VQ +A G H +
Sbjct: 4221 WGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCV 4262
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
DG ++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4263 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4313
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 129/276 (46%), Gaps = 25/276 (9%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N + P+L G + N + H +AL+ G + +WG + G+LG G
Sbjct: 471 RVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG 530
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P+VI ++ + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 531 DTVP-LEEPKVISAFSG----KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 585
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + E +P V L G+ + DVACG + A+T G +++WG G+LG G
Sbjct: 586 ---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 642
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D V V CG ++ +DG+++ WG +
Sbjct: 643 DGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 690
Query: 379 NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ + YP ++ G +V +AAG H L +
Sbjct: 691 HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 124/253 (49%), Gaps = 30/253 (11%)
Query: 134 ENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N +GS + + QV+ GS + A++
Sbjct: 2952 ESAATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + A G G+LG GI+ + PR I + ++ K V G H+ A++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYV------VKKVAVHSGGRHATALTV 3064
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS ALTS G LY
Sbjct: 3065 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELY 3121
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRD 363
WG + G+LG G T L P + + +L+ +Q VACG + TL +
Sbjct: 3122 TWGLGEYGRLGHGDNTT--QLKP-------KMVKVLLGHRVIQ-VACGSRDAQTLALTDE 3171
Query: 364 GRIHGWGYNSYGQ 376
G + WG +G+
Sbjct: 3172 GLVFSWGDGDFGK 3184
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 134/310 (43%), Gaps = 53/310 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHC 125
+ G +H A++S+G +++WG E G+LG G P ++ L+ E V + GAH
Sbjct: 4044 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4103
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCG 175
A L+ WG+ + P+L A + ++ ++CG
Sbjct: 4104 ACVTA----------AGDLYTWGKGRYGRLGHSDSEDQLKPKLV-EALQGHRVV-DIACG 4151
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + L++ + +WG +YG+LGRG +G + P I + +V
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVKV 4202
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G VYTWG G +LGH S D PR+V L G + +A G +
Sbjct: 4203 ECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSL 4259
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLV 350
H T G +Y WG + GQLG G T P LV V V
Sbjct: 4260 HCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRV 4306
Query: 351 ACGHSHTLVY 360
ACG +HTL +
Sbjct: 4307 ACGSAHTLAW 4316
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 45/285 (15%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+L A N + H A+A+ G +++WG + G+LG G + P+ +
Sbjct: 482 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVI 541
Query: 109 KQLQ----SEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT 164
+ V I+CG+ +AAI E L+ WG+ N+ RL G+
Sbjct: 542 SAFSGKQAGKHVVHIACGSTYSAAITAEGE---------LYTWGRG---NYGRLGHGSSE 589
Query: 165 PNTI-----------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
I + V+CGS +A++E G + +WG +YG+LGRG +G + P
Sbjct: 590 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTP 648
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
++I+ + +V CG S A++++G+VY+WG G +LGH G +E
Sbjct: 649 KLIEKLQDL--------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH-----GTEE 695
Query: 272 LL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ P+ + L G + DVA G H ALT +++WG + Q
Sbjct: 696 HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 136/293 (46%), Gaps = 33/293 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG G+ G G L PK + G AG + + IACG ++AA
Sbjct: 510 LAATGEVYSWGCGDGGRLGH-GDTVPLEEPKVIS-AFSGKQAGKHV--VHIACGSTYSAA 565
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E P V L+ V ++CG+ +A
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA------ 619
Query: 137 GTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
++W WG R G TP I + +V CGS +AL++ G +
Sbjct: 620 -VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQV 678
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG + +LG G T E ++ P++++G + +K+ V+ G H A++E+ E
Sbjct: 679 YSWGKGDNQRLGHG-TEEHVRYPKLLEGL--------QGKKVIDVAAGSTHCLALTEDSE 729
Query: 249 VYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
V++W GS Q H +L+ E P + LD I +ACG S A +S
Sbjct: 730 VHSW--GSNDQCQHFDTLRVTKPE--PAALPGLDTKHIVGIACGPAQSFAWSS 778
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 139/340 (40%), Gaps = 63/340 (18%)
Query: 56 CPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
C AN IAC + ++ +G ++T N P+ V+ L S
Sbjct: 445 CEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRN 494
Query: 116 VKSISCGA--HCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAF 163
+ I+ + H A+A +T ++ WG G P++ AF
Sbjct: 495 IVKIAAHSDGHHYLALA---------ATGEVYSWGCGDGGRLGHGDTVPLEEPKVI-SAF 544
Query: 164 TPNTI---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF 220
+ + ++CGS + A++ G L WG YG+LG G + E P ++ G
Sbjct: 545 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-SSEDEAIPMLVAGLKGL 603
Query: 221 LDEAPELEKITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
K+ V+CG + + AV+ENG+V++WG G G+LG D P+ +
Sbjct: 604 --------KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR---GGSDGCKTPKLIE 652
Query: 279 ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
L + + V CG S ALT G +Y+WG +LG G ++ + R
Sbjct: 653 KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG------------TEEHVRYP 700
Query: 339 PILVVPNGVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+L G ++ VA G +H L D +H WG N Q
Sbjct: 701 KLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 110/281 (39%), Gaps = 69/281 (24%)
Query: 186 GLLQAWGYNEYGQLGRGI---------TCEGLQGPRVIK--------------------G 216
G + WG+N GQLG GI CE L R ++ G
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010
Query: 217 Y----------AKFLDEAPELEKITQ-------VSCGEYHSAAVSENGEVYTWGLGSVGQ 259
Y + + LE I V+ G H A+S GEVY+WG G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LGH + D+ PR + +L GI + DVA GG HS +T+ G LY WG + G+LG
Sbjct: 4071 LGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG--- 4124
Query: 320 QTRSFSLIPNESDTYFRNIPILVVP---NGVQLVAC--GHSHTLVYMRDGRIHGWGYNSY 374
SD+ + P LV + V +AC G + TL D + WG Y
Sbjct: 4125 ----------HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDY 4174
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADA 414
G+ S P +D G V K+ G S L +
Sbjct: 4175 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4215
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG + G G + +R P+Q+ + + IA G H DG
Sbjct: 4217 AVYTWGKGDYHRLGH-GSDDHVRRPRQVQ-------GLQGKKVIAIATGSLHCVCCTEDG 4268
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
++TWG N+ GQLGDGT + P V LQ + V ++CG+ T A
Sbjct: 4269 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 74/186 (39%), Gaps = 22/186 (11%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+TQ++C E +S NG VYT S L P+ V L I +A
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------------DTLAPQLVQGLASRNIVKIA 499
Query: 290 C--GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
G H AL + G +Y+WG G+LG G +P E V
Sbjct: 500 AHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPLEEPKVISAFSGKQAGKHV 553
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGG 406
+ACG +++ +G ++ WG +YG+ + S P V G +V +A G G
Sbjct: 554 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSG 613
Query: 407 HSAVLA 412
+ LA
Sbjct: 614 DAQTLA 619
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 82/218 (37%), Gaps = 62/218 (28%)
Query: 246 NGEVYTWGLGSVGQLG--------------------HCSLQSGDKELL------------ 273
+G +Y WG GQLG L G++ L
Sbjct: 3951 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010
Query: 274 -----------------PRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWGGSQAGQ 314
P + ++ +FIK VA GG H AL+S+G +Y+WG ++ G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LG G RS P ++ R I ++ VA G +H+ G ++ WG Y
Sbjct: 4071 LGHG--NRSPCDRPRVIES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRY 4120
Query: 375 GQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
G+ + S P V+ G V +A G G + L
Sbjct: 4121 GRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTL 4158
>gi|410223232|gb|JAA08835.1| hect domain and RLD 2 [Pan troglodytes]
gi|410304314|gb|JAA30757.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 176/411 (42%), Gaps = 67/411 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
++ ++VWG N Q G L+ K P + N + +A G + AV
Sbjct: 2958 RTKVFVWGLNDKDQLG------GLKGSKIKVPSFSETLSALNV--VQVAGGSKSLFAVTV 3009
Query: 80 DGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPREN 135
+G ++ G G+LG G G P ++ L S VK ++ G H TA
Sbjct: 3010 EGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV----- 3064
Query: 136 DGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
DG +++ WG+ PRL T I ++CGS H AL+
Sbjct: 3065 DG-----KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSS 3117
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGP--RVIKGYAKFLDEAPELEKITQVSCG--EYHSA 241
G L WG EYG+LG G L+ +V+ G+ ++ QV+CG + +
Sbjct: 3118 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-----------RVIQVACGSRDAQTL 3166
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A+++ G V++WG G G+LG + + +P+ + L+G + + CG S ALT
Sbjct: 3167 ALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTKS 3223
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLV 359
G ++ WG +LG G SD + R ++ G ++V A G H L
Sbjct: 3224 GVVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3271
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
G+++ WG N +GQ N +T P+ V G+ + ++A G HS
Sbjct: 3272 VTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3322
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3068 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 3119
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 3120 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 3172
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 3173 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3229
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV+++G+VY
Sbjct: 3230 GKGDYFRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDSGQVYA 3280
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3281 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3326
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 3007 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQI-----TALSSYVVKKVAVHSGGRHATA 3061
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+
Sbjct: 3062 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------ 3115
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 3116 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3169
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 3170 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 3220
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH S K P+ V L G I VA G +H A+T G
Sbjct: 3221 TKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDSGQ 3277
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 3278 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3324
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 144/327 (44%), Gaps = 50/327 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +D+A G H+A V + G
Sbjct: 4060 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRGIEV--VDVAAGGAHSACVTAAGD 4111
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG E + P+ V+ LQ V I+CG+ + +D T+
Sbjct: 4112 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC--LTDDDTV--- 4166
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 4167 --WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4224
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 4225 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4275
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G + VACG H+ AW S+
Sbjct: 4276 NDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAWSTSKPAS 4323
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPIL 341
G P + +P E + + + IPI+
Sbjct: 4324 AGKLP-----AQVPMEYN-HLQEIPII 4344
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 174/411 (42%), Gaps = 76/411 (18%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P C A A R + + G + AV +DG
Sbjct: 3954 IYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALATLRPVQLIGGEQTLFAVTADG 4004
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 4005 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE------- 4057
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG+ + PR+ + V+ G H ++ G L
Sbjct: 4058 ---GEVYSWGEAEDGKLGHGNRSPCDRPRVIES--LRGIEVVDVAAGGAHSACVTAAGDL 4112
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSEN 246
WG YG+LG + + L+ P+++ EA + ++ ++C G+ + ++++
Sbjct: 4113 YTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVVDIACGSGDAQTLCLTDD 4163
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4164 DTVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 4220
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTL 358
WG +LG G SD + R P VQ +A G H +
Sbjct: 4221 WGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCV 4262
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
DG ++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4263 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4313
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 129/276 (46%), Gaps = 25/276 (9%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N + P+L G + N + H +AL+ G + +WG + G+LG G
Sbjct: 471 RVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG 530
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P+VI ++ + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 531 DTVP-LEEPKVISAFSG----KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 585
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + E +P V L G+ + DVACG + A+T G +++WG G+LG G
Sbjct: 586 ---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 642
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D V V CG ++ +DG+++ WG +
Sbjct: 643 DGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 690
Query: 379 NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ + YP ++ G +V +AAG H L +
Sbjct: 691 HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 124/253 (49%), Gaps = 30/253 (11%)
Query: 134 ENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N +GS + + QV+ GS + A++
Sbjct: 2952 ESAATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + A G G+LG GI+ + PR I + ++ K V G H+ A++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYV------VKKVAVHSGGRHATALTV 3064
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS ALTS G LY
Sbjct: 3065 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELY 3121
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRD 363
WG + G+LG G T L P + + +L+ +Q VACG + TL +
Sbjct: 3122 TWGLGEYGRLGHGDNTT--QLKP-------KMVKVLLGHRVIQ-VACGSRDAQTLALTDE 3171
Query: 364 GRIHGWGYNSYGQ 376
G + WG +G+
Sbjct: 3172 GLVFSWGDGDFGK 3184
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 134/310 (43%), Gaps = 53/310 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHC 125
+ G +H A++S+G +++WG E G+LG G P ++ L+ E V + GAH
Sbjct: 4044 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4103
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCG 175
A L+ WG+ + P+L A + ++ ++CG
Sbjct: 4104 ACVTA----------AGDLYTWGKGRYGRLGHSDSEDQLKPKLV-EALQGHRVV-DIACG 4151
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + L++ + +WG +YG+LGRG +G + P I + +V
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVKV 4202
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G VYTWG G +LGH S D PR+V L G + +A G +
Sbjct: 4203 ECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSL 4259
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLV 350
H T G +Y WG + GQLG G T P LV V V
Sbjct: 4260 HCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRV 4306
Query: 351 ACGHSHTLVY 360
ACG +HTL +
Sbjct: 4307 ACGSAHTLAW 4316
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 45/285 (15%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+L A N + H A+A+ G +++WG + G+LG G + P+ +
Sbjct: 482 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVI 541
Query: 109 KQLQ----SEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT 164
+ V I+CG+ +AAI E L+ WG+ N+ RL G+
Sbjct: 542 SAFSGKQAGKHVVHIACGSTYSAAITAEGE---------LYTWGRG---NYGRLGHGSSE 589
Query: 165 PNTI-----------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
I + V+CGS +A++E G + +WG +YG+LGRG +G + P
Sbjct: 590 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTP 648
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
++I+ + +V CG S A++++G+VY+WG G +LGH G +E
Sbjct: 649 KLIEKLQDL--------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH-----GTEE 695
Query: 272 LL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ P+ + L G + DVA G H ALT +++WG + Q
Sbjct: 696 HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 136/293 (46%), Gaps = 33/293 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG G+ G G L PK + G AG + + IACG ++AA
Sbjct: 510 LAATGEVYSWGCGDGGRLGH-GDTVPLEEPKVIS-AFSGKQAGKHV--VHIACGSTYSAA 565
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E P V L+ V ++CG+ +A
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA------ 619
Query: 137 GTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
++W WG R G TP I + +V CGS +AL++ G +
Sbjct: 620 -VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQV 678
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG + +LG G T E ++ P++++G + +K+ V+ G H A++E+ E
Sbjct: 679 YSWGKGDNQRLGHG-TEEHVRYPKLLEGL--------QGKKVIDVAAGSTHCLALTEDSE 729
Query: 249 VYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
V++W GS Q H +L+ E P + LD I +ACG S A +S
Sbjct: 730 VHSW--GSNDQCQHFDTLRVTKPE--PAALPGLDTKHIVGIACGPAQSFAWSS 778
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 139/340 (40%), Gaps = 63/340 (18%)
Query: 56 CPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
C AN IAC + ++ +G ++T N P+ V+ L S
Sbjct: 445 CEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRN 494
Query: 116 VKSISCGA--HCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAF 163
+ I+ + H A+A +T ++ WG G P++ AF
Sbjct: 495 IVKIAAHSDGHHYLALA---------ATGEVYSWGCGDGGRLGHGDTVPLEEPKVI-SAF 544
Query: 164 TPNTI---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF 220
+ + ++CGS + A++ G L WG YG+LG G + E P ++ G
Sbjct: 545 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-SSEDEAIPMLVAGLKGL 603
Query: 221 LDEAPELEKITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
K+ V+CG + + AV+ENG+V++WG G G+LG D P+ +
Sbjct: 604 --------KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR---GGSDGCKTPKLIE 652
Query: 279 ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
L + + V CG S ALT G +Y+WG +LG G ++ + R
Sbjct: 653 KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG------------TEEHVRYP 700
Query: 339 PILVVPNGVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+L G ++ VA G +H L D +H WG N Q
Sbjct: 701 KLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 110/281 (39%), Gaps = 69/281 (24%)
Query: 186 GLLQAWGYNEYGQLGRGI---------TCEGLQGPRVIK--------------------G 216
G + WG+N GQLG GI CE L R ++ G
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010
Query: 217 Y----------AKFLDEAPELEKITQ-------VSCGEYHSAAVSENGEVYTWGLGSVGQ 259
Y + + LE I V+ G H A+S GEVY+WG G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LGH + D+ PR + +L GI + DVA GG HS +T+ G LY WG + G+LG
Sbjct: 4071 LGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG--- 4124
Query: 320 QTRSFSLIPNESDTYFRNIPILVVP---NGVQLVAC--GHSHTLVYMRDGRIHGWGYNSY 374
SD+ + P LV + V +AC G + TL D + WG Y
Sbjct: 4125 ----------HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDY 4174
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADA 414
G+ S P +D G V K+ G S L +
Sbjct: 4175 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4215
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG + G G + +R P+Q+ + + IA G H DG
Sbjct: 4217 AVYTWGKGDYHRLGH-GSDDHVRRPRQVQ-------GLQGKKVIAIATGSLHCVCCTEDG 4268
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
++TWG N+ GQLGDGT + P V LQ + V ++CG+ T A
Sbjct: 4269 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 74/186 (39%), Gaps = 22/186 (11%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+TQ++C E +S NG VYT S L P+ V L I +A
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------------DTLAPQLVQGLASRNIVKIA 499
Query: 290 C--GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
G H AL + G +Y+WG G+LG G +P E V
Sbjct: 500 AHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPLEEPKVISAFSGKQAGKHV 553
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGG 406
+ACG +++ +G ++ WG +YG+ + S P V G +V +A G G
Sbjct: 554 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSG 613
Query: 407 HSAVLA 412
+ LA
Sbjct: 614 DAQTLA 619
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 82/218 (37%), Gaps = 62/218 (28%)
Query: 246 NGEVYTWGLGSVGQLG--------------------HCSLQSGDKELL------------ 273
+G +Y WG GQLG L G++ L
Sbjct: 3951 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010
Query: 274 -----------------PRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWGGSQAGQ 314
P + ++ +FIK VA GG H AL+S+G +Y+WG ++ G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LG G RS P ++ R I ++ VA G +H+ G ++ WG Y
Sbjct: 4071 LGHG--NRSPCDRPRVIES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRY 4120
Query: 375 GQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
G+ + S P V+ G V +A G G + L
Sbjct: 4121 GRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTL 4158
>gi|332235891|ref|XP_003267138.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1 [Nomascus leucogenys]
Length = 4855
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 125/425 (29%), Positives = 193/425 (45%), Gaps = 65/425 (15%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
MD + T+RP D ++ K +Y+WG GQ GR + +P P
Sbjct: 3975 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMVPAAAP--------- 4023
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
+ S+ + CG T + ++GT+ G +G+LG G + + LQ V +
Sbjct: 4024 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQL 4083
Query: 120 --SCGAH-CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI------IC 170
SCG+ + A+ E E ++ WG ++ +L G +
Sbjct: 4084 VTSCGSDGHSMALTESGE---------VFSWGDG---DYGKLGHGNSDRQRRPXQGEEVV 4131
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV--IKGYAKFLDEAPELE 228
Q+SCG H ++ G L +G +YG+LG G T RV ++GY
Sbjct: 4132 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY----------- 4180
Query: 229 KITQVSCGEYHSAAVSENGE-VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+I QV+CG H+ AVS +G V+ +G G G+LG L + + P+++ L GI IK
Sbjct: 4181 QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG---LGNSTAKSSPQKIDVLCGIGIKK 4237
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
VACG S ALT G +Y +G Q +GL P+ R+ + + IP+L GV
Sbjct: 4238 VACGTQFSVALTKDGHVYTFG--QDRLIGL-PEGRA------RNHNRPQQIPVLA---GV 4285
Query: 348 QL--VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAG 404
+ VA G HTL +G ++ WG NS GQ + + P+ V G+ VR+++AG
Sbjct: 4286 IIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAG 4345
Query: 405 GGHSA 409
HSA
Sbjct: 4346 RCHSA 4350
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 186/405 (45%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ P+L P+ ++++ I G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQ------PKL--APSFSDAQ--TIEAGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG----T 138
+ G +G+LG G + +K+L E +SI ++ + +DG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQS---TLKKLTFEPHRSIK-------KVSSSKGSDGHTLAF 473
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ ++ WG + +P+L G ++C VS G H A++E G L
Sbjct: 474 TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGEL 532
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G + P ++K ++ + +VSCG H+ A+S++G
Sbjct: 533 YTWGEGDFGRLGHGDS-NSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 581
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ + AL G+FI+ V G S ALTS G +Y
Sbjct: 582 TVWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVY 636
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V V+ G SH L D
Sbjct: 637 AWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-VSIGDSHCLALSHDNE 685
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 140/307 (45%), Gaps = 48/307 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P Q + ++CG +H+A V SDG
Sbjct: 4102 VFSWGDGDYGKLGHGNSDRQRR-PXQ------------GEEVVQMSCGFKHSAVVTSDGK 4148
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG++
Sbjct: 4149 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA----DGSM--- 4201
Query: 143 RLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T P I I +V+CG+ VAL++ G + +
Sbjct: 4202 -VWAFGDG---DYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4257
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ I A + I V+ G H+ A++ NG+VY
Sbjct: 4258 GQDRLIGLPEG-RARNHNRPQQIPVLAGVI--------IEDVAVGAEHTLALASNGDVYA 4308
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWGGS 310
WG S GQLG L + P V L G ++ ++ G HS A T+ A G S
Sbjct: 4309 WGSNSEGQLG---LGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVS 4365
Query: 311 QAGQLGL 317
QLGL
Sbjct: 4366 VPLQLGL 4372
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P I I +V GS +AL+ G + AW
Sbjct: 583 -VWSFG---GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I VS G+ H A+S + EVY
Sbjct: 639 GCG--ACLGCGSSEATALRPKLIEELAA--------TRIVDVSIGDSHCLALSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDGI I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 98/228 (42%), Gaps = 35/228 (15%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +GQL G V+ A AP + QV CG+ + + NG V
Sbjct: 4001 WGAGRHGQLAEA-------GRNVMVPAA-----APSFSQAQQVICGQNCTFVIQANGTVL 4048
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGALYAW 307
G GS G+LG + S D +L + AL G + + +CG HS ALT G +++W
Sbjct: 4049 ACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSW 4105
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G R P + + + ++CG H+ V DG++
Sbjct: 4106 GDGDYGKLGHGNSDRQRR--PXQGEEVVQ-------------MSCGFKHSAVVTSDGKLF 4150
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
+G YG+ ++ P V G ++ ++A G H+ AV AD
Sbjct: 4151 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 4198
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VSE EVY WG S QL G +E + + +A + + G + +++ G
Sbjct: 368 VSETCEVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ A G G+LGLG +L + + R+I + G HTL +
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RSIKKVSSSKG------SDGHTLAFTT 475
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+G + WG YG+ + S+ YP + + G+V ++AG HSA + +
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
>gi|156394306|ref|XP_001636767.1| predicted protein [Nematostella vectensis]
gi|156223873|gb|EDO44704.1| predicted protein [Nematostella vectensis]
Length = 363
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 156/353 (44%), Gaps = 71/353 (20%)
Query: 60 ANSRWL------DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS 113
AN W+ +++CG EH+A V ++G L+T+G N++GQLG G + P VK+L+
Sbjct: 27 ANKFWIRDDAVVNLSCGDEHSAVVTANGKLYTFGCNDWGQLGHGNTKSYTKPSVVKKLKP 86
Query: 114 EFVKSISCGAHCTAAIAEPRE-------NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPN 166
E V ++CG + T A E DG + G + S+ P++ G
Sbjct: 87 EKVYMVACGRNHTIAATESGHLYSFGCGGDGQLG------HGDAEDSHVPKIIEGLDVQK 140
Query: 167 TIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCE-----GLQGP-RVIK-GYAK 219
++CGS A++E G L WG GQ G G E L G R++ GY
Sbjct: 141 YK--HLACGSDFSAAITENGELYTWGSCGEGQNGLGEDTEIPTRLHLHGKVRMVSCGYYH 198
Query: 220 F--------------------------LDEAPELEKITQV-------SCGEYHSAAVSEN 246
LD +L+KI + +CG +A V++N
Sbjct: 199 MAVVTEDGSLYMCGEKEGGKLGLDHEQLDNTSQLQKIKSIEDQVVVAACGAEFTAVVTKN 258
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
G VYT+G G+ GQLG S S + P R+ + + + V+CG + +T G LY
Sbjct: 259 GSVYTFGQGNQGQLGLGS--SMMETEFPERIPLFEKVKARTVSCGESFTAVITKHGNLYT 316
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
+G + G+LGLG + S + P E F N V++V CG H LV
Sbjct: 317 FGDGRHGKLGLGDECFSNTFKP-EKVKRFNNFT-------VKMVTCGGCHMLV 361
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 9/108 (8%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ ++Y +G + GQ G + P+++P LF + ++CG TA
Sbjct: 255 VTKNGSVYTFGQGNQGQLGLGSSMMETEFPERIP--LF-----EKVKARTVSCGESFTAV 307
Query: 77 VASDGTLFTWGANEFGQLGDGTE--EGRKHPEKVKQLQSEFVKSISCG 122
+ G L+T+G G+LG G E PEKVK+ + VK ++CG
Sbjct: 308 ITKHGNLYTFGDGRHGKLGLGDECFSNTFKPEKVKRFNNFTVKMVTCG 355
>gi|408501212|ref|YP_006865131.1| RCC1-like protein [Bifidobacterium asteroides PRL2011]
gi|408466036|gb|AFU71565.1| RCC1-like protein [Bifidobacterium asteroides PRL2011]
Length = 1186
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 158/357 (44%), Gaps = 53/357 (14%)
Query: 24 YVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANS--RWLDIACGHEHTAAVASDG 81
Y WG + SGQ G +P ++ P N + + ++ G +H+ AV SDG
Sbjct: 755 YAWGRSDSGQLGNNTTTAYSTVPVRV--RDPSSPTDKNKGLKAIQVSAGGDHSLAVGSDG 812
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQ---LQSEFVK-SISCGAHCTAAIAEP----- 132
+ WG+N GQLGDGT R P KV + + F +S G + + AI
Sbjct: 813 NAYAWGSNGSGQLGDGTYTTRTTPVKVSKPADAPTNFTYVQVSGGYNDSLAIDSDGNAYG 872
Query: 133 -------RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
+ DGT STSR + ++ ++ P F I Q+S G+ H +A+
Sbjct: 873 CGDNTYGKLGDGT-STSRAMLVKVSKPADAPTDF--------IYMQISAGAGHSLAVGSD 923
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQG--PRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
G AWG ++ GQLG + G P ++ + DE L K TQVS G HS AV
Sbjct: 924 GYAYAWGRSDSGQLGNNTSGFGAHSSVPVRVRDPSSPTDENKGL-KATQVSGGGDHSLAV 982
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-------ALDGIFIKDVACGGVHSC 296
+G VY WG+ + GQLG+ + +P V G+ V G S
Sbjct: 983 GSDGYVYAWGINNYGQLGNNTTSGSTANPVPVHVRDPANSADTSKGLQATQVKVGYDFSL 1042
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG 353
A+ S G YAWG + GQLG N++ T + +P+ VV N +QLV G
Sbjct: 1043 AMGSDGNAYAWGANGNGQLG------------NDT-TNTKLVPVPVVFN-LQLVITG 1085
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 114/401 (28%), Positives = 164/401 (40%), Gaps = 57/401 (14%)
Query: 24 YVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTL 83
Y WGYN GQ G G P ++ + G P + ++ ++ G+ H+ A+ SDG
Sbjct: 699 YAWGYNRYGQLG-DGTTTTRTTPVKVS-KPVGAPT--DFTYVQVSGGYYHSLAIGSDGYA 754
Query: 84 FTWGANEFGQLGDGTEEGRKH-PEKVKQLQSEFVKS-------ISCGAHCTAAIAEPREN 135
+ WG ++ GQLG+ T P +V+ S K+ +S G + A+
Sbjct: 755 YAWGRSDSGQLGNNTTTAYSTVPVRVRDPSSPTDKNKGLKAIQVSAGGDHSLAVG----- 809
Query: 136 DGTISTSRLWVWGQNQGSNFPRLFWGAFTPNT---------------IICQVSCGSVHVV 180
S + WG N GS +L G +T T QVS G +
Sbjct: 810 ----SDGNAYAWGSN-GSG--QLGDGTYTTRTTPVKVSKPADAPTNFTYVQVSGGYNDSL 862
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
A+ G G N YG+LG G + +V K +AP Q+S G HS
Sbjct: 863 AIDSDGNAYGCGDNTYGKLGDGTSTSRAMLVKVSKPA-----DAPTDFIYMQISAGAGHS 917
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD-------GIFIKDVACGGV 293
AV +G Y WG GQLG+ + G +P RV G+ V+ GG
Sbjct: 918 LAVGSDGYAYAWGRSDSGQLGNNTSGFGAHSSVPVRVRDPSSPTDENKGLKATQVSGGGD 977
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQL--V 350
HS A+ S G +YAWG + GQLG + S + N + R+ G+Q V
Sbjct: 978 HSLAVGSDGYVYAWGINNYGQLGNNTTSGSTA---NPVPVHVRDPANSADTSKGLQATQV 1034
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
G+ +L DG + WG N GQ N+ + P PV
Sbjct: 1035 KVGYDFSLAMGSDGNAYAWGANGNGQLGNDTTNTKLVPVPV 1075
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 110/381 (28%), Positives = 154/381 (40%), Gaps = 58/381 (15%)
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQ---LQSEFVK-SISCGAHCTAAIAE 131
AV SDG + WG N +GQLGDGT R P KV + ++F +S G + + AI
Sbjct: 691 AVGSDGNAYAWGYNRYGQLGDGTTTTRTTPVKVSKPVGAPTDFTYVQVSGGYYHSLAIG- 749
Query: 132 PRENDGTISTSRLWVWGQNQG-----------SNFPRLFWGAFTPNT-----IICQVSCG 175
S + WG++ S P +P QVS G
Sbjct: 750 --------SDGYAYAWGRSDSGQLGNNTTTAYSTVPVRVRDPSSPTDKNKGLKAIQVSAG 801
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
H +A+ G AWG N GQLG G +V K +AP QVS
Sbjct: 802 GDHSLAVGSDGNAYAWGSNGSGQLGDGTYTTRTTPVKVSKPA-----DAPTNFTYVQVSG 856
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG----IFIKDVACG 291
G S A+ +G Y G + G+LG + S + +L + D I+++ ++ G
Sbjct: 857 GYNDSLAIDSDGNAYGCGDNTYGKLGDGTSTS--RAMLVKVSKPADAPTDFIYMQ-ISAG 913
Query: 292 GVHSCALTSKGALYAWGGSQAGQL-----GLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
HS A+ S G YAWG S +GQL G G + + + S N +
Sbjct: 914 AGHSLAVGSDGYAYAWGRSDSGQLGNNTSGFGAHSSVPVRVRDPSSPTDENKGLKAT--- 970
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKST-YAWYPSPVDWCVGEVRKLAAGG 405
V+ G H+L DG ++ WG N+YGQ N ++ P PV VR A
Sbjct: 971 --QVSGGGDHSLAVGSDGYVYAWGINNYGQLGNNTTSGSTANPVPV-----HVRDPANSA 1023
Query: 406 GHSAVLADACSLKELCEFRLA 426
S L A +K +F LA
Sbjct: 1024 DTSKGL-QATQVKVGYDFSLA 1043
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 109/245 (44%), Gaps = 33/245 (13%)
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
+A+ G AWGYN YGQLG G T +V K AP QVS G YH
Sbjct: 690 LAVGSDGNAYAWGYNRYGQLGDGTTTTRTTPVKVSKPVG-----APTDFTYVQVSGGYYH 744
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD-------GIFIKDVACGG 292
S A+ +G Y WG GQLG+ + + +P RV G+ V+ GG
Sbjct: 745 SLAIGSDGYAYAWGRSDSGQLGNNTTTA--YSTVPVRVRDPSSPTDKNKGLKAIQVSAGG 802
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLI----PNESDTYFRNIPILVVPNGVQ 348
HS A+ S G YAWG + +GQLG G T + + P ++ T F +
Sbjct: 803 DHSLAVGSDGNAYAWGSNGSGQLGDGTYTTRTTPVKVSKPADAPTNFTYV---------- 852
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKST----YAWYPSPVDWCVGEV-RKLAA 403
V+ G++ +L DG +G G N+YG+ + ST P D + +++A
Sbjct: 853 QVSGGYNDSLAIDSDGNAYGCGDNTYGKLGDGTSTSRAMLVKVSKPADAPTDFIYMQISA 912
Query: 404 GGGHS 408
G GHS
Sbjct: 913 GAGHS 917
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 76/175 (43%), Gaps = 20/175 (11%)
Query: 229 KITQVSCGEYH-------SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD 281
+ +Q+S +Y+ S AV +G Y WG GQLG + + + + V
Sbjct: 671 RFSQISGSKYNGDPTYGFSLAVGSDGNAYAWGYNRYGQLGDGTTTTRTTPVKVSKPVGAP 730
Query: 282 GIFIKDVACGG-VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIP----NESDTYFR 336
F GG HS A+ S G YAWG S +GQLG T ++S +P + S +
Sbjct: 731 TDFTYVQVSGGYYHSLAIGSDGYAYAWGRSDSGQLGNN-TTTAYSTVPVRVRDPSSPTDK 789
Query: 337 NIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
N + + V+ G H+L DG + WG N GQ + TY +PV
Sbjct: 790 NKGLKAI-----QVSAGGDHSLAVGSDGNAYAWGSNGSGQLGD--GTYTTRTTPV 837
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 58/127 (45%), Gaps = 23/127 (18%)
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLI----PNESDTYFRNIPILVVPNGVQLV 350
S A+ S G YAWG ++ GQLG G T + + P + T F + V
Sbjct: 689 SLAVGSDGNAYAWGYNRYGQLGDGTTTTRTTPVKVSKPVGAPTDFTYV----------QV 738
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKST-YAWYP-------SPVDWCVG-EVRKL 401
+ G+ H+L DG + WG + GQ N +T Y+ P SP D G + ++
Sbjct: 739 SGGYYHSLAIGSDGYAYAWGRSDSGQLGNNTTTAYSTVPVRVRDPSSPTDKNKGLKAIQV 798
Query: 402 AAGGGHS 408
+AGG HS
Sbjct: 799 SAGGDHS 805
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA--NSRWL---DIACGHEHTAAV 77
+Y WG N+ GQ G P P PA + S+ L + G++ + A+
Sbjct: 988 VYAWGINNYGQLGNNTTSGSTANPV---PVHVRDPANSADTSKGLQATQVKVGYDFSLAM 1044
Query: 78 ASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
SDG + WGAN GQLG+ T + P V
Sbjct: 1045 GSDGNAYAWGANGNGQLGNDTTNTKLVPVPV 1075
>gi|410265950|gb|JAA20941.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 178/412 (43%), Gaps = 69/412 (16%)
Query: 20 KSAIYVWGYNHSGQTG-RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
++ ++VWG N Q G KG + ++ P + N + +A G + AV
Sbjct: 2958 RTKVFVWGLNDKDQLGGLKGSKIKV-------PSFSETLSALNV--VQVAGGSKSLFAVT 3008
Query: 79 SDGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRE 134
+G ++ G G+LG G G P ++ L S VK ++ G H TA
Sbjct: 3009 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV---- 3064
Query: 135 NDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSE 184
DG +++ WG+ PRL T I ++CGS H AL+
Sbjct: 3065 -DG-----KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTS 3116
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGP--RVIKGYAKFLDEAPELEKITQVSCG--EYHS 240
G L WG EYG+LG G L+ +V+ G+ ++ QV+CG + +
Sbjct: 3117 SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-----------RVIQVACGSRDAQT 3165
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
A+++ G V++WG G G+LG + + +P+ + L+G + + CG S ALT
Sbjct: 3166 LALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTK 3222
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTL 358
G ++ WG +LG G SD + R ++ G ++V A G H L
Sbjct: 3223 SGVVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRGKKIVHVAVGALHCL 3270
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
G+++ WG N +GQ N +T P+ V G+ + ++A G HS
Sbjct: 3271 AVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3322
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3068 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 3119
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 3120 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 3172
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 3173 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3229
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV+++G+VY
Sbjct: 3230 GKGDYFRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDSGQVYA 3280
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3281 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3326
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 3007 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQI-----TALSSYVVKKVAVHSGGRHATA 3061
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+
Sbjct: 3062 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------ 3115
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 3116 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3169
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 3170 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 3220
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH S K P+ V L G I VA G +H A+T G
Sbjct: 3221 TKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDSGQ 3277
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 3278 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3324
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 144/327 (44%), Gaps = 50/327 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +D+A G H+A V + G
Sbjct: 4060 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRGIEV--VDVAAGGAHSACVTAAGD 4111
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG E + P+ V+ LQ V I+CG+ + +D T+
Sbjct: 4112 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC--LTDDDTV--- 4166
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 4167 --WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4224
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 4225 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4275
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G + VACG H+ AW S+
Sbjct: 4276 NDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAWSTSKPAS 4323
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPIL 341
G P + +P E + + + IPI+
Sbjct: 4324 AGKLP-----AQVPMEYN-HLQEIPII 4344
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 174/411 (42%), Gaps = 76/411 (18%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P C A A R + + G + AV +DG
Sbjct: 3954 IYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALATLRPVQLIGGEQTLFAVTADG 4004
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 4005 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE------- 4057
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG+ + PR+ + V+ G H ++ G L
Sbjct: 4058 ---GEVYSWGEAEDGKLGHGNRSPCDRPRVIES--LRGIEVVDVAAGGAHSACVTAAGDL 4112
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSEN 246
WG YG+LG + + L+ P+++ EA + ++ ++C G+ + ++++
Sbjct: 4113 YTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVVDIACGSGDAQTLCLTDD 4163
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4164 DTVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 4220
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTL 358
WG +LG G SD + R P VQ +A G H +
Sbjct: 4221 WGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCV 4262
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
DG ++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4263 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4313
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 129/276 (46%), Gaps = 25/276 (9%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N + P+L G + N + H +AL+ G + +WG + G+LG G
Sbjct: 471 RVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG 530
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P+VI ++ + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 531 DTVP-LEEPKVISAFSG----KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 585
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + E +P V L G+ + DVACG + A+T G +++WG G+LG G
Sbjct: 586 ---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 642
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D V V CG ++ +DG+++ WG +
Sbjct: 643 DGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 690
Query: 379 NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ + YP ++ G +V +AAG H L +
Sbjct: 691 HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 124/253 (49%), Gaps = 30/253 (11%)
Query: 134 ENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N +GS + + QV+ GS + A++
Sbjct: 2952 ESAATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + A G G+LG GI+ + PR I + ++ K V G H+ A++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYV------VKKVAVHSGGRHATALTV 3064
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS ALTS G LY
Sbjct: 3065 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELY 3121
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRD 363
WG + G+LG G T L P + + +L+ +Q VACG + TL +
Sbjct: 3122 TWGLGEYGRLGHGDNTT--QLKP-------KMVKVLLGHRVIQ-VACGSRDAQTLALTDE 3171
Query: 364 GRIHGWGYNSYGQ 376
G + WG +G+
Sbjct: 3172 GLVFSWGDGDFGK 3184
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 134/310 (43%), Gaps = 53/310 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHC 125
+ G +H A++S+G +++WG E G+LG G P ++ L+ E V + GAH
Sbjct: 4044 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4103
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCG 175
A L+ WG+ + P+L A + ++ ++CG
Sbjct: 4104 ACVTA----------AGDLYTWGKGRYGRLGHSDSEDQLKPKLV-EALQGHRVV-DIACG 4151
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + L++ + +WG +YG+LGRG +G + P I + +V
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVKV 4202
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G VYTWG G +LGH S D PR+V L G + +A G +
Sbjct: 4203 ECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSL 4259
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLV 350
H T G +Y WG + GQLG G T P LV V V
Sbjct: 4260 HCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRV 4306
Query: 351 ACGHSHTLVY 360
ACG +HTL +
Sbjct: 4307 ACGSAHTLAW 4316
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 45/285 (15%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+L A N + H A+A+ G +++WG + G+LG G + P+ +
Sbjct: 482 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVI 541
Query: 109 KQLQ----SEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT 164
+ V I+CG+ +AAI E L+ WG+ N+ RL G+
Sbjct: 542 SAFSGKQAGKHVVHIACGSTYSAAITAEGE---------LYTWGRG---NYGRLGHGSSE 589
Query: 165 PNTI-----------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
I + V+CGS +A++E G + +WG +YG+LGRG +G + P
Sbjct: 590 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTP 648
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
++I+ + +V CG S A++++G+VY+WG G +LGH G +E
Sbjct: 649 KLIEKLQDL--------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH-----GTEE 695
Query: 272 LL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ P+ + L G + DVA G H ALT +++WG + Q
Sbjct: 696 HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 136/293 (46%), Gaps = 33/293 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG G+ G G L PK + G AG + + IACG ++AA
Sbjct: 510 LAATGEVYSWGCGDGGRLGH-GDTVPLEEPKVIS-AFSGKQAGKHV--VHIACGSTYSAA 565
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E P V L+ V ++CG+ +A
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA------ 619
Query: 137 GTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
++W WG R G TP I + +V CGS +AL++ G +
Sbjct: 620 -VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQV 678
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG + +LG G T E ++ P++++G + +K+ V+ G H A++E+ E
Sbjct: 679 YSWGKGDNQRLGHG-TEEHVRYPKLLEGL--------QGKKVIDVAAGSTHCLALTEDSE 729
Query: 249 VYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
V++W GS Q H +L+ E P + LD I +ACG S A +S
Sbjct: 730 VHSW--GSNDQCQHFDTLRVTKPE--PAALPGLDTKHIVGIACGPAQSFAWSS 778
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 139/340 (40%), Gaps = 63/340 (18%)
Query: 56 CPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
C AN IAC + ++ +G ++T N P+ V+ L S
Sbjct: 445 CEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRN 494
Query: 116 VKSISCGA--HCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAF 163
+ I+ + H A+A +T ++ WG G P++ AF
Sbjct: 495 IVKIAAHSDGHHYLALA---------ATGEVYSWGCGDGGRLGHGDTVPLEEPKVI-SAF 544
Query: 164 TPNTI---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF 220
+ + ++CGS + A++ G L WG YG+LG G + E P ++ G
Sbjct: 545 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-SSEDEAIPMLVAGLKGL 603
Query: 221 LDEAPELEKITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
K+ V+CG + + AV+ENG+V++WG G G+LG D P+ +
Sbjct: 604 --------KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR---GGSDGCKTPKLIE 652
Query: 279 ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
L + + V CG S ALT G +Y+WG +LG G ++ + R
Sbjct: 653 KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG------------TEEHVRYP 700
Query: 339 PILVVPNGVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+L G ++ VA G +H L D +H WG N Q
Sbjct: 701 KLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 110/281 (39%), Gaps = 69/281 (24%)
Query: 186 GLLQAWGYNEYGQLGRGI---------TCEGLQGPRVIK--------------------G 216
G + WG+N GQLG GI CE L R ++ G
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010
Query: 217 Y----------AKFLDEAPELEKITQ-------VSCGEYHSAAVSENGEVYTWGLGSVGQ 259
Y + + LE I V+ G H A+S GEVY+WG G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LGH + D+ PR + +L GI + DVA GG HS +T+ G LY WG + G+LG
Sbjct: 4071 LGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG--- 4124
Query: 320 QTRSFSLIPNESDTYFRNIPILVVP---NGVQLVAC--GHSHTLVYMRDGRIHGWGYNSY 374
SD+ + P LV + V +AC G + TL D + WG Y
Sbjct: 4125 ----------HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDY 4174
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADA 414
G+ S P +D G V K+ G S L +
Sbjct: 4175 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4215
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG + G G + +R P+Q+ + + IA G H DG
Sbjct: 4217 AVYTWGKGDYHRLGH-GSDDHVRRPRQVQ-------GLQGKKVIAIATGSLHCVCCTEDG 4268
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
++TWG N+ GQLGDGT + P V LQ + V ++CG+ T A
Sbjct: 4269 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 74/186 (39%), Gaps = 22/186 (11%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+TQ++C E +S NG VYT S L P+ V L I +A
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------------DTLAPQLVQGLASRNIVKIA 499
Query: 290 C--GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
G H AL + G +Y+WG G+LG G +P E V
Sbjct: 500 AHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPLEEPKVISAFSGKQAGKHV 553
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGG 406
+ACG +++ +G ++ WG +YG+ + S P V G +V +A G G
Sbjct: 554 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSG 613
Query: 407 HSAVLA 412
+ LA
Sbjct: 614 DAQTLA 619
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 82/218 (37%), Gaps = 62/218 (28%)
Query: 246 NGEVYTWGLGSVGQLG--------------------HCSLQSGDKELL------------ 273
+G +Y WG GQLG L G++ L
Sbjct: 3951 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010
Query: 274 -----------------PRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWGGSQAGQ 314
P + ++ +FIK VA GG H AL+S+G +Y+WG ++ G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LG G RS P ++ R I ++ VA G +H+ G ++ WG Y
Sbjct: 4071 LGHG--NRSPCDRPRVIES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRY 4120
Query: 375 GQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
G+ + S P V+ G V +A G G + L
Sbjct: 4121 GRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTL 4158
>gi|229442359|gb|AAI72911.1| hect domain and RLD 2 [synthetic construct]
Length = 2427
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 175/411 (42%), Gaps = 67/411 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
++ ++VWG N Q G L+ K P + N + +A G + AV
Sbjct: 551 RTKVFVWGLNDKDQLG------GLKGSKIKVPSFSETLSALNV--VQVAGGSKSLFAVTV 602
Query: 80 DGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPREN 135
+G ++ G G+LG G G P ++ L S VK ++ G H TA +
Sbjct: 603 EGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVD---- 658
Query: 136 DGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
+++ WG+ PRL T I ++CGS H AL+
Sbjct: 659 ------GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSS 710
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGP--RVIKGYAKFLDEAPELEKITQVSCG--EYHSA 241
G L WG EYG+LG G L+ +V+ G+ ++ QV+CG + +
Sbjct: 711 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-----------RVIQVACGSRDAQTL 759
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A+++ G V++WG G G+LG + + +P+ + L+G + + CG S ALT
Sbjct: 760 ALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTKS 816
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLV 359
G ++ WG +LG G SD + R ++ G ++V A G H L
Sbjct: 817 GVVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 864
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
G+++ WG N +GQ N +T P+ V G+ + ++A G HS
Sbjct: 865 VTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 915
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 661 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 712
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 713 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 765
Query: 143 RLWVWGQNQGSNFPRLFWGAF----TPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 766 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 822
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV+++G+VY
Sbjct: 823 GKGDYFRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDSGQVYA 873
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 874 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 919
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 600 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQIT-----ALSSYVVKKVAVHSGGRHATA 654
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+
Sbjct: 655 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------ 708
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 709 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 762
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 763 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 813
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH S K P+ V L G I VA G +H A+T G
Sbjct: 814 TKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDSGQ 870
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 871 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 917
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 144/327 (44%), Gaps = 50/327 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +D+A G H+A V + G
Sbjct: 1653 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRGIEV--VDVAAGGAHSACVTAAGD 1704
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG E + P+ V+ LQ V I+CG+ + +D T+
Sbjct: 1705 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC--LTDDDTV--- 1759
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 1760 --WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 1817
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 1818 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 1868
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G + VACG H+ AW S+
Sbjct: 1869 NDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAWSTSKPAS 1916
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPIL 341
G P + +P E + + + IPI+
Sbjct: 1917 AGKLP-----AQVPMEYN-HLQEIPII 1937
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 174/411 (42%), Gaps = 76/411 (18%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P C A A R + + G + AV +DG
Sbjct: 1547 IYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALATLRPVQLIGGEQTLFAVTADG 1597
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 1598 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE------- 1650
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG+ + PR+ + V+ G H ++ G L
Sbjct: 1651 ---GEVYSWGEAEDGKLGHGNRSPCDRPRVIES--LRGIEVVDVAAGGAHSACVTAAGDL 1705
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSEN 246
WG YG+LG + + L+ P+++ EA + ++ ++C G+ + ++++
Sbjct: 1706 YTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVVDIACGSGDAQTLCLTDD 1756
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 1757 DTVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 1813
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTL 358
WG +LG G SD + R P VQ +A G H +
Sbjct: 1814 WGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCV 1855
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
DG ++ WG N GQ + + P V G +V ++A G H+
Sbjct: 1856 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 1906
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 124/253 (49%), Gaps = 30/253 (11%)
Query: 134 ENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N +GS + + QV+ GS + A++
Sbjct: 545 ESAATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 603
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + A G G+LG GI+ + PR I + ++ K V G H+ A++
Sbjct: 604 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYV------VKKVAVHSGGRHATALTV 657
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS ALTS G LY
Sbjct: 658 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELY 714
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRD 363
WG + G+LG G T L P + + +L+ +Q VACG + TL +
Sbjct: 715 TWGLGEYGRLGHGDNTT--QLKP-------KMVKVLLGHRVIQ-VACGSRDAQTLALTDE 764
Query: 364 GRIHGWGYNSYGQ 376
G + WG +G+
Sbjct: 765 GLVFSWGDGDFGK 777
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 134/310 (43%), Gaps = 53/310 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHC 125
+ G +H A++S+G +++WG E G+LG G P ++ L+ E V + GAH
Sbjct: 1637 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 1696
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCG 175
A L+ WG+ + P+L A + ++ ++CG
Sbjct: 1697 ACVTA----------AGDLYTWGKGRYGRLGHSDSEDQLKPKLV-EALQGHRVV-DIACG 1744
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + L++ + +WG +YG+LGRG +G + P I + +V
Sbjct: 1745 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVKV 1795
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G VYTWG G +LGH S D PR+V L G + +A G +
Sbjct: 1796 ECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSL 1852
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLV 350
H T G +Y WG + GQLG G T P LV V V
Sbjct: 1853 HCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRV 1899
Query: 351 ACGHSHTLVY 360
ACG +HTL +
Sbjct: 1900 ACGSAHTLAW 1909
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 110/281 (39%), Gaps = 69/281 (24%)
Query: 186 GLLQAWGYNEYGQLGRGI---------TCEGLQGPRVIK--------------------G 216
G + WG+N GQLG GI CE L R ++ G
Sbjct: 1545 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 1603
Query: 217 Y----------AKFLDEAPELEKITQ-------VSCGEYHSAAVSENGEVYTWGLGSVGQ 259
Y + + LE I V+ G H A+S GEVY+WG G+
Sbjct: 1604 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 1663
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LGH + D+ PR + +L GI + DVA GG HS +T+ G LY WG + G+LG
Sbjct: 1664 LGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG--- 1717
Query: 320 QTRSFSLIPNESDTYFRNIPILVVP---NGVQLVAC--GHSHTLVYMRDGRIHGWGYNSY 374
SD+ + P LV + V +AC G + TL D + WG Y
Sbjct: 1718 ----------HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDY 1767
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADA 414
G+ S P +D G V K+ G S L +
Sbjct: 1768 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 1808
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG + G G + +R P+Q+ + + IA G H DG
Sbjct: 1810 AVYTWGKGDYHRLGH-GSDDHVRRPRQVQ-------GLQGKKVIAIATGSLHCVCCTEDG 1861
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
++TWG N+ GQLGDGT + P V LQ + V ++CG+ T A
Sbjct: 1862 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 1908
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 82/218 (37%), Gaps = 62/218 (28%)
Query: 246 NGEVYTWGLGSVGQLG--------------------HCSLQSGDKELL------------ 273
+G +Y WG GQLG L G++ L
Sbjct: 1544 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 1603
Query: 274 -----------------PRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWGGSQAGQ 314
P + ++ +FIK VA GG H AL+S+G +Y+WG ++ G+
Sbjct: 1604 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 1663
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LG G RS P ++ R I ++ VA G +H+ G ++ WG Y
Sbjct: 1664 LGHG--NRSPCDRPRVIES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRY 1713
Query: 375 GQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
G+ + S P V+ G V +A G G + L
Sbjct: 1714 GRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTL 1751
>gi|171915079|ref|ZP_02930549.1| RCC1 repeat domain protein [Verrucomicrobium spinosum DSM 4136]
Length = 1933
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 159/358 (44%), Gaps = 57/358 (15%)
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
++A GH HT DGT++ GA E GQLG P + L V ++ GA
Sbjct: 113 NLAAGHAHTVVAREDGTVWGVGAAELGQLGVSLTGSSALPVQAGSLTD--VVCVTAGAAH 170
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG-----AFTPNT------IICQVSC 174
TAA+ +DGT LW++G N F +L G ++P + V+
Sbjct: 171 TAAV----RSDGT-----LWMYGLN---TFGQLGLGYASVSVWSPTQVGALSGVTADVAA 218
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G +H + L G + +G N G LG G T G P +A L + ++
Sbjct: 219 GDLHTLVLKTDGTVWGFGENGVGNLGDG-TTTGRVSPV----------QATGLTDVVDLA 267
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVH 294
G HS A+ +G V+ +G GQLG + L +V AL + +A G H
Sbjct: 268 AGSLHSLALKSDGTVWAFGANFEGQLGDG---TNTMRLTAVQVSALTDVVA--IAAAGRH 322
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACG 353
S AL S G ++A+G ++AGQLG G T RN P+ V GV +A G
Sbjct: 323 SLALKSDGTVWAFGANEAGQLGDGTTTS-------------RNAPVQVSGLTGVVAIAAG 369
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
+H+L DG + +G N+YGQ + T PV+ + +V +AAG HS ++
Sbjct: 370 GAHSLALKADGTVWAFGANTYGQLGDGSLTAGTV--PVEMAITDVAAIAAGAEHSVLM 425
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 159/356 (44%), Gaps = 50/356 (14%)
Query: 66 DIAC---GHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRK-HPEKVKQLQSEFVKSISC 121
D+ C G HTAAV SDGTL+ +G N FGQLG G P +V L S ++
Sbjct: 160 DVVCVTAGAAHTAAVRSDGTLWMYGLNTFGQLGLGYASVSVWSPTQVGAL-SGVTADVAA 218
Query: 122 GAHCTAAIAEPRENDGTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCG 175
G T + + DGT+ W +G+N G+ R+ T T + ++ G
Sbjct: 219 GDLHTLVL----KTDGTV-----WGFGENGVGNLGDGTTTGRVSPVQATGLTDVVDLAAG 269
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
S+H +AL G + A+G N GQLG G L +V L + ++
Sbjct: 270 SLHSLALKSDGTVWAFGANFEGQLGDGTNTMRLTAVQV-----------SALTDVVAIAA 318
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
HS A+ +G V+ +G GQLG + S + P +V L G+ +A GG HS
Sbjct: 319 AGRHSLALKSDGTVWAFGANEAGQLGDGTTTSRNA---PVQVSGLTGVVA--IAAGGAHS 373
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS 355
AL + G ++A+G + GQLG G T +P+ + V +A G
Sbjct: 374 LALKADGTVWAFGANTYGQLGDGSLTAG-------------TVPVEMAITDVAAIAAGAE 420
Query: 356 HTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
H+++ DG + G GY++ G+ + P PV V V L AGG ++ V+
Sbjct: 421 HSVLMKADGTLWGVGYSAGGRLGGASPSPRKLPMPVS-GVTTVATLKAGGDNTGVV 475
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 107/366 (29%), Positives = 164/366 (44%), Gaps = 60/366 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++++G N GQ G + P Q+ G +G + D+A G HT + +DGT
Sbjct: 180 LWMYGLNTFGQLGLGYASVSVWSPTQV-----GALSGVTA---DVAAGDLHTLVLKTDGT 231
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ +G N G LGDGT GR P + L V ++ G+ + A+ ++DGT+
Sbjct: 232 VWGFGENGVGNLGDGTTTGRVSPVQATGLTD--VVDLAAGSLHSLAL----KSDGTV--- 282
Query: 143 RLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
W +G N G+N RL + T + ++ H +AL G + A+G NE
Sbjct: 283 --WAFGANFEGQLGDGTNTMRLTAVQVSALTDVVAIAAAGRHSLALKSDGTVWAFGANEA 340
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG G T P + G L + ++ G HS A+ +G V+ +G +
Sbjct: 341 GQLGDGTTTS-RNAPVQVSG----------LTGVVAIAAGGAHSLALKADGTVWAFGANT 389
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
GQLG SL +G +P + D + +A G HS + + G L+ G S G+LG
Sbjct: 390 YGQLGDGSLTAG---TVPVEMAITD---VAAIAAGAEHSVLMKADGTLWGVGYSAGGRLG 443
Query: 317 LGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVA---CGHSHTLVYMRDGRIHGWGYNS 373
S P R +P+ V +GV VA G +T V +G + G+GYN
Sbjct: 444 ------GASPSP-------RKLPMPV--SGVTTVATLKAGGDNTGVVRGNGAVLGFGYNH 488
Query: 374 YGQAAN 379
GQ N
Sbjct: 489 AGQLGN 494
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 123/458 (26%), Positives = 186/458 (40%), Gaps = 90/458 (19%)
Query: 3 INEIIGETARPVDNIPAKSAIYVW--GYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGA 60
+ +++ A + ++ KS VW G N GQ G +L A
Sbjct: 260 LTDVVDLAAGSLHSLALKSDGTVWAFGANFEGQLGDGTNTMRLT----------AVQVSA 309
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
+ + IA H+ A+ SDGT++ +GANE GQLGDGT R P +V L + V +
Sbjct: 310 LTDVVAIAAAGRHSLALKSDGTVWAFGANEAGQLGDGTTTSRNAPVQVSGL-TGVVAIAA 368
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI--------ICQV 172
GAH A A DGT+ W +G N + +L G+ T T+ + +
Sbjct: 369 GGAHSLALKA-----DGTV-----WAFGAN---TYGQLGDGSLTAGTVPVEMAITDVAAI 415
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLG-------------RGITC-----EGLQGPRVI 214
+ G+ H V + G L GY+ G+LG G+T G V+
Sbjct: 416 AAGAEHSVLMKADGTLWGVGYSAGGRLGGASPSPRKLPMPVSGVTTVATLKAGGDNTGVV 475
Query: 215 KGYAKFLD---------------------EAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
+G L + L + V G H+ +G V+++G
Sbjct: 476 RGNGAVLGFGYNHAGQLGNGGVLPSSVPVQPTGLSGVRDVGVGYNHTVVAKTDGTVWSYG 535
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
L S+GQLG + +G +L P +V AL K VA G S L + G ++ +G + G
Sbjct: 536 LNSLGQLG---VTAGASQLTPVQVTALSD--AKAVAVGYDFSLVLKTDGTVWGFGSNTNG 590
Query: 314 QLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNS 373
LG G S + S T + VA G H+ + DG + +G N+
Sbjct: 591 TLGDGTFVSSRATPAQVSGTV-----------DITAVAAGRGHSALLKSDGTVWTFGGNT 639
Query: 374 YGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
YGQ + +T + P G V +AAGG H+ VL
Sbjct: 640 YGQLGDGTTTSRYAPVQATGLTGAV-AVAAGGRHTVVL 676
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 150/365 (41%), Gaps = 62/365 (16%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+ +GYNH+GQ G G +P +P + G S D+ G+ HT +DG
Sbjct: 480 AVLGFGYNHAGQLGNGGV-----LPSSVPVQPTGL-----SGVRDVGVGYNHTVVAKTDG 529
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
T++++G N GQLG + P +V L K+++ G + + + DGT+
Sbjct: 530 TVWSYGLNSLGQLGVTAGASQLTPVQVTALSDA--KAVAVGYDFSLVL----KTDGTV-- 581
Query: 142 SRLWVWGQNQGSNFPRLFWGAF-----TPNTI-----ICQVSCGSVHVVALSECGLLQAW 191
W +G N G F TP + I V+ G H L G + +
Sbjct: 582 ---WGFGSNTNGTLGD---GTFVSSRATPAQVSGTVDITAVAAGRGHSALLKSDGTVWTF 635
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G N YGQLG G T YA +A L V+ G H+ + +G V+
Sbjct: 636 GGNTYGQLGDGTTT---------SRYAPV--QATGLTGAVAVAAGGRHTVVLKGDGTVWA 684
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
+G + GQLG + + L ++ L + +A G H+ A+ S G ++A G +
Sbjct: 685 FGGNASGQLGDGTTTT---RLTAVQMSGLTNVVA--IAVGEEHTVAVRSDGTVWAAGKNA 739
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGY 371
+GQLG G T + + T+ VA G HTL DG + WG
Sbjct: 740 SGQLGDGTVTDRLTAVQVPGVTH------------ALAVAAGRGHTLALKIDGTLLSWGA 787
Query: 372 NSYGQ 376
GQ
Sbjct: 788 GEQGQ 792
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 101/230 (43%), Gaps = 30/230 (13%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+A G H+A + SDGT++T+G N +GQLGDGT R P + L +++ G T
Sbjct: 616 VAAGRGHSALLKSDGTVWTFGGNTYGQLGDGTTTSRYAPVQATGLTGAV--AVAAGGRHT 673
Query: 127 AAIAEPRENDGTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVV 180
+ + DGT+ W +G N G+ RL + T + ++ G H V
Sbjct: 674 VVL----KGDGTV-----WAFGGNASGQLGDGTTTTRLTAVQMSGLTNVVAIAVGEEHTV 724
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
A+ G + A G N GQLG G + L +V P + V+ G H+
Sbjct: 725 AVRSDGTVWAAGKNASGQLGDGTVTDRLTAVQV-----------PGVTHALAVAAGRGHT 773
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
A+ +G + +WG G GQL +G LP AL F++ A
Sbjct: 774 LALKIDGTLLSWGAGEQGQL--REFGTGVPVSLPVNSPALGYEFVEPTAA 821
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 50/120 (41%), Gaps = 20/120 (16%)
Query: 16 NIPAKSAIYVW--GYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEH 73
+ +S VW G N SGQ G G Q+P + L +A G H
Sbjct: 723 TVAVRSDGTVWAAGKNASGQLG-DGTVTDRLTAVQVP---------GVTHALAVAAGRGH 772
Query: 74 TAAVASDGTLFTWGANEFGQLGD-GTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
T A+ DGTL +WGA E GQL + GT P L EFV+ TAAI P
Sbjct: 773 TLALKIDGTLLSWGAGEQGQLREFGTGVPVSLPVNSPALGYEFVEP-------TAAIVSP 825
>gi|405954130|gb|EKC21653.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
Length = 2154
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 134/281 (47%), Gaps = 39/281 (13%)
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
HT AV G +F+WG ++G+LG G + ++ P +++ LQ E V +SCG +A +
Sbjct: 1897 HTLAVTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQLSCGFKHSAVVTA- 1955
Query: 133 RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGL----- 187
DG +L+ +G ++ RL G T + +V H + CGL
Sbjct: 1956 ---DG-----KLFTFGNG---DYGRLGLGTTTNKKVPTRVVALESHQIGYVACGLNHTLC 2004
Query: 188 -------LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
+ A+G ++G+LG+G T G P IK + I +V+CG S
Sbjct: 2005 VSADGTNVWAFGDGDFGKLGQGNTV-GKHLPTKIKALQGHV--------IKKVACGTQFS 2055
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
A+S+ G+V+TWG + +G + G P+ V +L G FI+DV CG H+ LTS
Sbjct: 2056 VALSKYGKVFTWGQERL--IGQPDTRGG-SNCQPQEVASLSGYFIEDVVCGAEHTLVLTS 2112
Query: 301 KGALYAWGGSQAGQLGLG---PQTRSFSLIPNESDTYFRNI 338
G ++ WG + GQLGLG R L+P + R +
Sbjct: 2113 DGDVWGWGSNSEGQLGLGHTNSPVREPQLVPCLTGKNIRQV 2153
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 169/398 (42%), Gaps = 73/398 (18%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
MD+ + +P D I K ++WG +GQ GR +P ++P F C
Sbjct: 1780 MDVQIMNWAMQKPEDWLIGGKCEAFLWGSGRNGQMCEGGR--GAFVPVRVPS--FSCSQ- 1834
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQ----SEF 115
I CG T V ++GT+ G +G+LG G + + +Q ++
Sbjct: 1835 ------QIVCGQNCTFVVQNNGTVLACGEGSYGRLGQGNSDDLHSLTAISSIQGFVVTQL 1888
Query: 116 VKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI--- 168
S+ H T A+ E E ++ WG ++ +L G P I
Sbjct: 1889 ATSVGSDGH-TLAVTESGE---------VFSWGDG---DYGKLGHGNSDRQRRPRQIEAL 1935
Query: 169 ----ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
+ Q+SCG H ++ G L +G +YG+LG G T RV+ A
Sbjct: 1936 QGEEVIQLSCGFKHSAVVTADGKLFTFGNGDYGRLGLGTTTNKKVPTRVV---------A 1986
Query: 225 PELEKITQVSCGEYHSAAVSENG-EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
E +I V+CG H+ VS +G V+ +G G G+LG + + LP ++ AL G
Sbjct: 1987 LESHQIGYVACGLNHTLCVSADGTNVWAFGDGDFGKLGQGNTVG---KHLPTKIKALQGH 2043
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQ-AGQLGLGPQTRSFS-LIPNESDT---YFRNI 338
IK VACG S AL+ G ++ WG + GQ P TR S P E + YF
Sbjct: 2044 VIKKVACGTQFSVALSKYGKVFTWGQERLIGQ----PDTRGGSNCQPQEVASLSGYF--- 2096
Query: 339 PILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
++ V CG HTLV DG + GWG NS GQ
Sbjct: 2097 --------IEDVVCGAEHTLVLTSDGDVWGWGSNSEGQ 2126
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 127/281 (45%), Gaps = 38/281 (13%)
Query: 145 WVWGQNQGSNFPRLFWGAFTPNTIIC-----QVSCGSVHVVALSECGLLQAWGYNEYGQL 199
++WG + GAF P + Q+ CG + G + A G YG+L
Sbjct: 1804 FLWGSGRNGQMCEGGRGAFVPVRVPSFSCSQQIVCGQNCTFVVQNNGTVLACGEGSYGRL 1863
Query: 200 GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG---EYHSAAVSENGEVYTWGLGS 256
G+G + L I F+ +TQ++ + H+ AV+E+GEV++WG G
Sbjct: 1864 GQG-NSDDLHSLTAISSIQGFV--------VTQLATSVGSDGHTLAVTESGEVFSWGDGD 1914
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
G+LGH + D++ PR++ AL G + ++CG HS +T+ G L+ +G G+LG
Sbjct: 1915 YGKLGH---GNSDRQRRPRQIEALQGEEVIQLSCGFKHSAVVTADGKLFTFGNGDYGRLG 1971
Query: 317 LGPQTRSFSLIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDG-RIHGWGYN 372
LG T + +P VV + + VACG +HTL DG + +G
Sbjct: 1972 LGTTTN-------------KKVPTRVVALESHQIGYVACGLNHTLCVSADGTNVWAFGDG 2018
Query: 373 SYGQAANEKSTYAWYPSPVDWCVGEV-RKLAAGGGHSAVLA 412
+G+ + P+ + G V +K+A G S L+
Sbjct: 2019 DFGKLGQGNTVGKHLPTKIKALQGHVIKKVACGTQFSVALS 2059
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 130/280 (46%), Gaps = 47/280 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V +DG
Sbjct: 1907 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVIQLSCGFKHSAVVTADGK 1958
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG GT +K P +V L+S + ++CG + T ++ DGT
Sbjct: 1959 LFTFGNGDYGRLGLGTTTNKKVPTRVVALESHQIGYVACGLNHTLCVSA----DGT---- 2010
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G +F +L G P I I +V+CG+ VALS+ G + W
Sbjct: 2011 NVWAFGDG---DFGKLGQGNTVGKHLPTKIKALQGHVIKKVACGTQFSVALSKYGKVFTW 2067
Query: 192 GYNEY-GQLGR--GITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
G GQ G C+ P+ + + + I V CG H+ ++ +G+
Sbjct: 2068 GQERLIGQPDTRGGSNCQ----PQEVASLSGYF--------IEDVVCGAEHTLVLTSDGD 2115
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
V+ WG S GQLG S +E P+ V L G I+ V
Sbjct: 2116 VWGWGSNSEGQLGLGHTNSPVRE--PQLVPCLTGKNIRQV 2153
>gi|441617074|ref|XP_004088418.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Nomascus leucogenys]
Length = 4530
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 176/411 (42%), Gaps = 67/411 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
++ ++VWG N Q G L+ K P + N + +A G + AV
Sbjct: 2654 RTKVFVWGLNDKDQLG------GLKGSKIKVPSFSETLSALNV--VQVAGGSKSLFAVTV 2705
Query: 80 DGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPREN 135
+G ++ G G+LG G G P ++ L S VK ++ G H TA
Sbjct: 2706 EGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV----- 2760
Query: 136 DGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
DG +++ WG+ PRL T I ++CGS H AL+
Sbjct: 2761 DG-----KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSS 2813
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGP--RVIKGYAKFLDEAPELEKITQVSCG--EYHSA 241
G L WG EYG+LG G L+ +V+ G+ ++ QV+CG + +
Sbjct: 2814 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-----------RVIQVACGSRDAQTL 2862
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A+++ G V++WG G G+LG + + +P+ + L+G + + CG S ALT
Sbjct: 2863 ALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTKS 2919
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLV 359
G ++ WG +LG G SD + R ++ G ++V A G H L
Sbjct: 2920 GVVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 2967
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
G+++ WG N +GQ N +T P+ V G+ + ++A G HS
Sbjct: 2968 VTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3018
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 2764 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 2815
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 2816 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 2868
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 2869 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 2925
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV+++G+VY
Sbjct: 2926 GKGDYFRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDSGQVYA 2976
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 2977 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3022
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 2703 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQI-----TALSSYVVKKVAVHSGGRHATA 2757
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+
Sbjct: 2758 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------ 2811
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 2812 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 2865
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 2866 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 2916
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH S K P+ V L G I VA G +H A+T G
Sbjct: 2917 TKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDSGQ 2973
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 2974 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3020
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 144/327 (44%), Gaps = 50/327 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +D+A G H+A V + G
Sbjct: 3756 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRGIEV--VDVAAGGAHSACVTAAGD 3807
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG E + P+ V+ LQ V I+CG+ + +D T+
Sbjct: 3808 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC--LTDDDTV--- 3862
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 3863 --WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 3920
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 3921 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 3971
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G + VACG H+ AW S+
Sbjct: 3972 NDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAWSTSKPAS 4019
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPIL 341
G P + +P E + + + IPI+
Sbjct: 4020 AGKLP-----AQVPMEYN-HLQEIPII 4040
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 174/411 (42%), Gaps = 76/411 (18%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P C A A R + + G + AV +DG
Sbjct: 3650 IYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALATLRPVQLIGGEQTLFAVTADG 3700
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 3701 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE------- 3753
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG+ + PR+ + V+ G H ++ G L
Sbjct: 3754 ---GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAGDL 3808
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSEN 246
WG YG+LG + + L+ P+++ EA + ++ ++C G+ + ++++
Sbjct: 3809 YTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVVDIACGSGDAQTLCLTDD 3859
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 3860 DTVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 3916
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTL 358
WG +LG G SD + R P VQ +A G H +
Sbjct: 3917 WGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCV 3958
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
DG ++ WG N GQ + + P V G +V ++A G H+
Sbjct: 3959 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4009
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 122/253 (48%), Gaps = 30/253 (11%)
Query: 134 ENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N +GS + + QV+ GS + A++
Sbjct: 2648 ESAATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2706
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + A G G+LG GI+ + PR I + ++ K V G H+ A++
Sbjct: 2707 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYV------VKKVAVHSGGRHATALTV 2760
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS ALTS G LY
Sbjct: 2761 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELY 2817
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRD 363
WG + G+LG G T + + +L+ +Q VACG + TL +
Sbjct: 2818 TWGLGEYGRLGHGDNTTQLKP---------KMVKVLLGHRVIQ-VACGSRDAQTLALTDE 2867
Query: 364 GRIHGWGYNSYGQ 376
G + WG +G+
Sbjct: 2868 GLVFSWGDGDFGK 2880
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 134/310 (43%), Gaps = 53/310 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHC 125
+ G +H A++S+G +++WG E G+LG G P ++ L+ E V + GAH
Sbjct: 3740 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 3799
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCG 175
A L+ WG+ + P+L A + ++ ++CG
Sbjct: 3800 ACVTA----------AGDLYTWGKGRYGRLGHSDSEDQLKPKLV-EALQGHRVV-DIACG 3847
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + L++ + +WG +YG+LGRG +G + P I + +V
Sbjct: 3848 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVKV 3898
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G VYTWG G +LGH S D PR+V L G + +A G +
Sbjct: 3899 ECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSL 3955
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLV 350
H T G +Y WG + GQLG G T P LV V V
Sbjct: 3956 HCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRV 4002
Query: 351 ACGHSHTLVY 360
ACG +HTL +
Sbjct: 4003 ACGSAHTLAW 4012
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 78/149 (52%), Gaps = 8/149 (5%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N + P+L G + N + H +AL+ G + +WG + G+LG G
Sbjct: 426 RVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG 485
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P+VI ++ + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 486 DTVP-LEEPKVISAFSG----KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 540
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACG 291
S + E +P V L G+ + DVACG
Sbjct: 541 ---GSSEDEAIPMLVAGLKGLKVIDVACG 566
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 110/281 (39%), Gaps = 69/281 (24%)
Query: 186 GLLQAWGYNEYGQLGRGI---------TCEGLQGPRVIK--------------------G 216
G + WG+N GQLG GI CE L R ++ G
Sbjct: 3648 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3706
Query: 217 Y----------AKFLDEAPELEKITQ-------VSCGEYHSAAVSENGEVYTWGLGSVGQ 259
Y + + LE I V+ G H A+S GEVY+WG G+
Sbjct: 3707 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3766
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LGH + D+ PR + +L GI + DVA GG HS +T+ G LY WG + G+LG
Sbjct: 3767 LGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG--- 3820
Query: 320 QTRSFSLIPNESDTYFRNIPILVVP---NGVQLVAC--GHSHTLVYMRDGRIHGWGYNSY 374
SD+ + P LV + V +AC G + TL D + WG Y
Sbjct: 3821 ----------HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDY 3870
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADA 414
G+ S P +D G V K+ G S L +
Sbjct: 3871 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 3911
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 127/319 (39%), Gaps = 69/319 (21%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG G+ G G L PK + G AG + + IACG ++AA
Sbjct: 465 LAATGEVYSWGCGDGGRLGH-GDTVPLEEPKVIS-AFSGKQAGKHV--VHIACGSTYSAA 520
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E P V L+ V ++CG+ +A EN+
Sbjct: 521 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAV-TENE 579
Query: 137 GTISTSRLW--VWG----------------------QNQGSNFP----RLFWGAFTPNTI 168
T S LW V G + +G P + F+G T + +
Sbjct: 580 -TTRLSVLWRSVLGILCVSGVVESFRYNQLGVGCRCRQRGWEPPQEDLKFFYGVLTRDVM 638
Query: 169 ICQ----VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQ--GPRVIKGYAKFLD 222
+ + G V QA GY I C G GP
Sbjct: 639 LREGQIVFEAGRPGCVPTPVSSQKQALGY---------IVCGGCSSLGPG---------- 679
Query: 223 EAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALD 281
+K+ V+ G H A++E+ EV++W GS Q H +L+ E P + LD
Sbjct: 680 -----KKVIDVAAGSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPE--PAALPGLD 730
Query: 282 GIFIKDVACGGVHSCALTS 300
I + CG SCA +S
Sbjct: 731 AKHIMGITCGPAQSCAWSS 749
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 74/159 (46%), Gaps = 28/159 (17%)
Query: 166 NTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAP 225
N + Q++C + LS G + YN P++++G A +
Sbjct: 405 NLGVTQIACAEKRFLILSRNGRVYTQAYNS-----------DTLAPQLVQGLA-----SR 448
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI 283
+ KI S G +H A++ GEVY+WG G G+LGH GD L P+ + A G
Sbjct: 449 NIVKIAAHSDG-HHYLALAATGEVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGK 502
Query: 284 ----FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLG 318
+ +ACG +S A+T++G LY WG G+LG G
Sbjct: 503 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG 541
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG + G G + +R P+Q+ + + IA G H DG
Sbjct: 3913 AVYTWGKGDYHRLGH-GSDDHVRRPRQVQ-------GLQGKKVIAIATGSLHCVCCTEDG 3964
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
++TWG N+ GQLGDGT + P V LQ + V ++CG+ T A
Sbjct: 3965 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4011
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 74/186 (39%), Gaps = 22/186 (11%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+TQ++C E +S NG VYT S L P+ V L I +A
Sbjct: 408 VTQIACAEKRFLILSRNGRVYTQAYNS-------------DTLAPQLVQGLASRNIVKIA 454
Query: 290 C--GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
G H AL + G +Y+WG G+LG G +P E V
Sbjct: 455 AHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPLEEPKVISAFSGKQAGKHV 508
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGG 406
+ACG +++ +G ++ WG +YG+ + S P V G +V +A G G
Sbjct: 509 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSG 568
Query: 407 HSAVLA 412
+ LA
Sbjct: 569 DAQTLA 574
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 82/218 (37%), Gaps = 62/218 (28%)
Query: 246 NGEVYTWGLGSVGQLG--------------------HCSLQSGDKELL------------ 273
+G +Y WG GQLG L G++ L
Sbjct: 3647 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3706
Query: 274 -----------------PRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWGGSQAGQ 314
P + ++ +FIK VA GG H AL+S+G +Y+WG ++ G+
Sbjct: 3707 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3766
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LG G RS P ++ R I ++ VA G +H+ G ++ WG Y
Sbjct: 3767 LGHG--NRSPCDRPRVIES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRY 3816
Query: 375 GQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
G+ + S P V+ G V +A G G + L
Sbjct: 3817 GRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTL 3854
>gi|37695550|gb|AAR00320.1| HECT E3 ubiquitin ligase [Homo sapiens]
Length = 1024
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/258 (34%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I Q++CG H +ALS+ G L AWG N +GQLG G P++++ A
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGV-------- 191
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
+ Q+S GE HS A+S +G +Y+WG GQLG +S D P + LD ++ V
Sbjct: 192 PLAQISAGEAHSTALSMSGNIYSWGKNECGQLGLGHTESKDD---PSLIEGLDNQKVEFV 248
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV---VPN 345
ACGG HS LT G L+ +G + GQLG N + R P LV V
Sbjct: 249 ACGGSHSALLTQDGLLFTFGAGKHGQLG-----------HNSTQNELR--PCLVAELVGY 295
Query: 346 GVQLVACGHSHTLVYMRD-GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL--- 401
V +ACG HTL Y+ D G++ +G GQ N + P PV E KL
Sbjct: 296 RVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESH 355
Query: 402 --------AAGGGHSAVL 411
AGG S +L
Sbjct: 356 TSEKELIMIAGGNQSILL 373
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 94/185 (50%), Gaps = 19/185 (10%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+KI Q++CG+YHS A+S+ GE++ WG GQLG + P+ V L G+ +
Sbjct: 138 KKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG--RKFPSTTTPQIVEHLAGVPLAQ 195
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV---P 344
++ G HS AL+ G +Y+WG ++ GQLGLG T ++ P L+
Sbjct: 196 ISAGEAHSTALSMSGNIYSWGKNECGQLGLG-------------HTESKDDPSLIEGLDN 242
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAA 403
V+ VACG SH+ + +DG + +G +GQ + + P V VG V ++A
Sbjct: 243 QKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIAC 302
Query: 404 GGGHS 408
G H+
Sbjct: 303 GRWHT 307
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 105/217 (48%), Gaps = 40/217 (18%)
Query: 62 SRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSIS 120
+ + I CG H+ A++ G LF WG N GQLG G + P+ V+ L + IS
Sbjct: 138 KKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQIS 197
Query: 121 CG-AHCTAAIAEPRENDGTISTS-RLWVWGQN----------QGSNFPRLFWGAFTPNTI 168
G AH TA +S S ++ WG+N + + P L G N
Sbjct: 198 AGEAHSTA-----------LSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGL--DNQK 244
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV--IKGYAKFLDEAPE 226
+ V+CG H L++ GLL +G ++GQLG T L+ V + GY
Sbjct: 245 VEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGY--------- 295
Query: 227 LEKITQVSCGEYHSAA-VSENGEVYTWGLGSVGQLGH 262
++TQ++CG +H+ A VS+ G+V+++G G GQLG+
Sbjct: 296 --RVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGN 330
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 91/190 (47%), Gaps = 15/190 (7%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G GR+ Q+ L G P I+ G H+ A++ G
Sbjct: 159 LFAWGQNLHGQLGV-GRKFPSTTTPQIVEHLAGVPLA------QISAGEAHSTALSMSGN 211
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST- 141
+++WG NE GQLG G E + P ++ L ++ V+ ++CG +A + + DG + T
Sbjct: 212 IYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQ----DGLLFTF 267
Query: 142 --SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYNEYGQ 198
+ G N N R A + Q++CG H +A +S+ G + ++G + GQ
Sbjct: 268 GAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQ 327
Query: 199 LGRGITCEGL 208
LG G T + L
Sbjct: 328 LGNGGTRDQL 337
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD-G 81
++ +G GQ G + +LR L EL G R IACG HT A SD G
Sbjct: 264 LFTFGAGKHGQLGHNSTQNELR--PCLVAELVG------YRVTQIACGRWHTLAYVSDLG 315
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVK 117
+F++G+ + GQLG+G + P VK SE +K
Sbjct: 316 KVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELK 351
>gi|300794901|ref|NP_001179920.1| RCC1 and BTB domain-containing protein 2 [Bos taurus]
gi|296481887|tpg|DAA24002.1| TPA: regulator of chromosome condensation (RCC1) and BTB (POZ)
domain containing protein 2 [Bos taurus]
Length = 527
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 117/233 (50%), Gaps = 24/233 (10%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H+V + G + WG+N Y QLG G T GL + + +++ +V+CG
Sbjct: 86 HIVLATTEGEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSN--------KQVIEVACGS 137
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHSC 296
YHS ++ +GEV+ WG + GQ+G S + + +PRRV L + ++ACG + S
Sbjct: 138 YHSLVLTSDGEVFAWGYNNSGQVGSGSTAN---QPIPRRVTGCLQSKVVVNIACGQMCSM 194
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ + G ++ WG + GQLGLG + + R VQ VACG++H
Sbjct: 195 AVVNTGEVFVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR----------VQRVACGYAH 244
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
TLV +G+++ WG NSYGQ + YP+PV V + R + HSA
Sbjct: 245 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPV--VVEKDRIIEIAACHSA 295
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 134/300 (44%), Gaps = 43/300 (14%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTAAIAEPRENDGTIS 140
+F G N G LG G + P ++ L + + +S G+ H A E
Sbjct: 43 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTE--------- 93
Query: 141 TSRLWVWGQNQGSNFPRLFWGA-FTP--------NTIICQVSCGSVHVVALSECGLLQAW 191
++ WG N S A P N + +V+CGS H + L+ G + AW
Sbjct: 94 -GEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAW 152
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
GYN GQ+G G T PR + G + + + ++CG+ S AV GEV+
Sbjct: 153 GYNNSGQVGSGSTANQ-PIPRRVTG-------CLQSKVVVNIACGQMCSMAVVNTGEVFV 204
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG GQLG L S + P RV AL GI ++ VACG H+ LT +G +YAWG +
Sbjct: 205 WGYNGNGQLG---LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 261
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRIHGWG 370
GQLG G N+S+ + ++ +++ AC +HT + G ++ WG
Sbjct: 262 YGQLGTG----------NKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 116/243 (47%), Gaps = 39/243 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G +P + L +N + +++ACG H+ + SDG
Sbjct: 96 VFTWGHNAYSQLG-NGTTNAGLVPYHISTNL------SNKQVIEVACGSYHSLVLTSDGE 148
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P +V LQS+ V +I+CG C+ A+ ++T
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAV---------VNT 199
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N N P A + +V+CG H + L++ G + AWG
Sbjct: 200 GEVFVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 259
Query: 194 NEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G + + P V+ E ++I ++ +C H SAA ++ G VY
Sbjct: 260 NSYGQLGTGNKSNQSYPTPVVV-----------EKDRIIEIAACHSAHTSAAKTQGGHVY 308
Query: 251 TWG 253
WG
Sbjct: 309 MWG 311
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 118/267 (44%), Gaps = 39/267 (14%)
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAHCTAAIAE 131
H ++G +FTWG N + QLG+GT P + L ++ V ++CG++ + +
Sbjct: 86 HIVLATTEGEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLT- 144
Query: 132 PRENDGTISTSRLWVWGQNQGSN----------FPRLFWGAFTPNTIICQVSCGSVHVVA 181
+DG + + WG N PR G ++ ++CG + +A
Sbjct: 145 ---SDGEV-----FAWGYNNSGQVGSGSTANQPIPRRVTGCLQSKVVV-NIACGQMCSMA 195
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
+ G + WGYN GQLG G + RV A + ++ +V+CG H+
Sbjct: 196 VVNTGEVFVWGYNGNGQLGLGSSGNQPTPCRV---------AALQGIRVQRVACGYAHTL 246
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVH-SCAL 298
+++ G+VY WG S GQLG +G+K + P VV I+ AC H S A
Sbjct: 247 VLTDEGQVYAWGANSYGQLG-----TGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAK 301
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFS 325
T G +Y WG + + L P FS
Sbjct: 302 TQGGHVYMWGQCRGQSVTL-PHLTHFS 327
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 68/151 (45%), Gaps = 20/151 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++VWGYN +GQ G Q P A R +ACG+ HT + +G
Sbjct: 202 VFVWGYNGNGQLGLGSSGNQ--------PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 253
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
++ WGAN +GQLG G + + +P V + ++ +C AH +AA +
Sbjct: 254 VYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQG--------- 304
Query: 142 SRLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 305 GHVYMWGQCRGQSVTLPHLTHFSSTDDVFAC 335
>gi|431902378|gb|ELK08879.1| RCC1 and BTB domain-containing protein 2 [Pteropus alecto]
Length = 621
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 110/215 (51%), Gaps = 22/215 (10%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HV+ + G + WG+N Y QLG G T GL + + +++ +V+CG
Sbjct: 180 HVILATTEGEIFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN--------KQVIEVACGS 231
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHSC 296
YHS ++ +GEV+ WG + GQ+G S + + +PRRV L + ++ACG + S
Sbjct: 232 YHSLVLTSDGEVFAWGYNNSGQVGSGSTAN---QPIPRRVTGCLQNKVVVNIACGQMCSV 288
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G +Y WG + GQLGLG T R + + VQ VACG++H
Sbjct: 289 AVVDNGEVYVWGYNGNGQLGLGSS--------GNQSTPCRIAALQGI--CVQRVACGYAH 338
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
TLV +G+++ WG NSYGQ + YP+PV
Sbjct: 339 TLVLTDEGQVYVWGANSYGQLGTGNKSNQSYPTPV 373
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 137/313 (43%), Gaps = 44/313 (14%)
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTA 127
G+E + +D +F G N G LG G + P ++ L + + S G+ H
Sbjct: 125 GNEVLYSTVND-EIFVLGTNCCGCLGLGDIQSTIEPRRLDSLSGKKIACFSYGSGPHVIL 183
Query: 128 AIAEPRENDGTISTSRLWVWGQNQGSNFPR---------LFWGAFTPNTIICQVSCGSVH 178
A E ++ WG N S N + +V+CGS H
Sbjct: 184 ATTE----------GEIFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYH 233
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
+ L+ G + AWGYN GQ+G G T PR + G + + + ++CG+
Sbjct: 234 SLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRVTG-------CLQNKVVVNIACGQM 285
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
S AV +NGEVY WG GQLG L S + P R+ AL GI ++ VACG H+ L
Sbjct: 286 CSVAVVDNGEVYVWGYNGNGQLG---LGSSGNQSTPCRIAALQGICVQRVACGYAHTLVL 342
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT- 357
T +G +Y WG + GQLG G N+S+ + + +++ AC +HT
Sbjct: 343 TDEGQVYVWGANSYGQLGTG----------NKSNQSYPTPVAVEKDRIIEIAACHSTHTS 392
Query: 358 LVYMRDGRIHGWG 370
+ G ++ WG
Sbjct: 393 AAKTQGGHVYMWG 405
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 116/242 (47%), Gaps = 37/242 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
I+ WG+N Q G G +P + L +N + +++ACG H+ + SDG
Sbjct: 190 IFTWGHNAYSQLG-NGTTNHGLVPCHISTNL------SNKQVIEVACGSYHSLVLTSDGE 242
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P +V LQ++ V +I+CG C+ A+ + E
Sbjct: 243 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSVAVVDNGE------- 295
Query: 142 SRLWVWGQNQGSNFPRLFWG-AFTPNTI-----IC--QVSCGSVHVVALSECGLLQAWGY 193
++VWG N G TP I IC +V+CG H + L++ G + WG
Sbjct: 296 --VYVWGYNGNGQLGLGSSGNQSTPCRIAALQGICVQRVACGYAHTLVLTDEGQVYVWGA 353
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVYT 251
N YGQLG G + + Y + A E ++I ++ +C H SAA ++ G VY
Sbjct: 354 NSYGQLG--------TGNKSNQSYPTPV--AVEKDRIIEIAACHSTHTSAAKTQGGHVYM 403
Query: 252 WG 253
WG
Sbjct: 404 WG 405
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 121/269 (44%), Gaps = 43/269 (15%)
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAHCTAAIAE 131
H ++G +FTWG N + QLG+GT P + L ++ V ++CG++ + +
Sbjct: 180 HVILATTEGEIFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT- 238
Query: 132 PRENDGTISTSRLWVWGQNQGSN----------FPRLFWGAFTPNTIICQVSCGSVHVVA 181
+DG + + WG N PR G N ++ ++CG + VA
Sbjct: 239 ---SDGEV-----FAWGYNNSGQVGSGSTANQPIPRRVTGCLQ-NKVVVNIACGQMCSVA 289
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRV--IKGYAKFLDEAPELEKITQVSCGEYH 239
+ + G + WGYN GQLG G + R+ ++G + +V+CG H
Sbjct: 290 VVDNGEVYVWGYNGNGQLGLGSSGNQSTPCRIAALQGIC-----------VQRVACGYAH 338
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVH-SC 296
+ +++ G+VY WG S GQLG +G+K + P V I+ AC H S
Sbjct: 339 TLVLTDEGQVYVWGANSYGQLG-----TGNKSNQSYPTPVAVEKDRIIEIAACHSTHTSA 393
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
A T G +Y WG + GQ + P SFS
Sbjct: 394 AKTQGGHVYMWGQCR-GQSVILPHLTSFS 421
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 78/174 (44%), Gaps = 21/174 (12%)
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHSCALTSK 301
N E++ G G LG +QS + PRR+ +L G K +AC G H T++
Sbjct: 134 NDEIFVLGTNCCGCLGLGDIQS---TIEPRRLDSLSG---KKIACFSYGSGPHVILATTE 187
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
G ++ WG + QLG G T + L+P T N ++ V ACG H+LV
Sbjct: 188 GEIFTWGHNAYSQLGNG--TTNHGLVPCHISTNLSNKQVIEV-------ACGSYHSLVLT 238
Query: 362 RDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE--VRKLAAGGGHSAVLAD 413
DG + WGYN+ GQ + + P V C+ V +A G S + D
Sbjct: 239 SDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSVAVVD 292
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 18/150 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G Q P + R +ACG+ HT + +G
Sbjct: 296 VYVWGYNGNGQLGLGSSGNQ-----STPCRIAALQGICVQR---VACGYAHTLVLTDEGQ 347
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WGAN +GQLG G + + +P V + ++ +C + T+A
Sbjct: 348 VYVWGANSYGQLGTGNKSNQSYPTPVAVEKDRIIEIAACHSTHTSA--------AKTQGG 399
Query: 143 RLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 400 HVYMWGQCRGQSVILPHLTSFSCTDDVFAC 429
>gi|6630609|dbj|BAA88519.1| cyclin-E binding protein 1 [Homo sapiens]
Length = 1024
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/258 (34%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I Q++CG H +ALS+ G L AWG N +GQLG G P++++ A
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGV-------- 191
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
+ Q+S GE HS A+S +G +Y+WG GQLG +S D P + LD ++ V
Sbjct: 192 PLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDD---PSLIEGLDNQKVEFV 248
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV---VPN 345
ACGG HS LT G L+ +G + GQLG N + R P LV V
Sbjct: 249 ACGGSHSALLTQDGLLFTFGAGKHGQLG-----------HNSTQNELR--PCLVAELVGY 295
Query: 346 GVQLVACGHSHTLVYMRD-GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL--- 401
V +ACG HTL Y+ D G++ +G GQ N + P PV E KL
Sbjct: 296 RVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESH 355
Query: 402 --------AAGGGHSAVL 411
AGG S +L
Sbjct: 356 TSEKELIMIAGGNQSILL 373
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 94/185 (50%), Gaps = 19/185 (10%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+KI Q++CG+YHS A+S+ GE++ WG GQLG + P+ V L G+ +
Sbjct: 138 KKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG--RKFPSTTTPQIVEHLAGVPLAQ 195
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV---P 344
++ G HS AL+ G +Y+WG ++ GQLGLG T ++ P L+
Sbjct: 196 ISAGEAHSMALSMSGNIYSWGKNECGQLGLG-------------HTESKDDPSLIEGLDN 242
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAA 403
V+ VACG SH+ + +DG + +G +GQ + + P V VG V ++A
Sbjct: 243 QKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIAC 302
Query: 404 GGGHS 408
G H+
Sbjct: 303 GRWHT 307
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 36/215 (16%)
Query: 62 SRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSIS 120
+ + I CG H+ A++ G LF WG N GQLG G + P+ V+ L + IS
Sbjct: 138 KKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQIS 197
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQN----------QGSNFPRLFWGAFTPNTIIC 170
G + A++ + ++ WG+N + + P L G N +
Sbjct: 198 AGEAHSMALS---------MSGNIYSWGKNECGQLGLGHTESKDDPSLIEG--LDNQKVE 246
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV--IKGYAKFLDEAPELE 228
V+CG H L++ GLL +G ++GQLG T L+ V + GY
Sbjct: 247 FVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGY----------- 295
Query: 229 KITQVSCGEYHSAA-VSENGEVYTWGLGSVGQLGH 262
++TQ++CG +H+ A VS+ G+V+++G G GQLG+
Sbjct: 296 RVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGN 330
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 91/190 (47%), Gaps = 15/190 (7%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G GR+ Q+ L G P I+ G H+ A++ G
Sbjct: 159 LFAWGQNLHGQLG-VGRKFPSTTTPQIVEHLAGVPLA------QISAGEAHSMALSMSGN 211
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST- 141
+++WG NE GQLG G E + P ++ L ++ V+ ++CG +A + + DG + T
Sbjct: 212 IYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQ----DGLLFTF 267
Query: 142 --SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYNEYGQ 198
+ G N N R A + Q++CG H +A +S+ G + ++G + GQ
Sbjct: 268 GAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQ 327
Query: 199 LGRGITCEGL 208
LG G T + L
Sbjct: 328 LGNGGTRDQL 337
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD-G 81
++ +G GQ G + +LR L EL G R IACG HT A SD G
Sbjct: 264 LFTFGAGKHGQLGHNSTQNELR--PCLVAELVG------YRVTQIACGRWHTLAYVSDLG 315
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVK 117
+F++G+ + GQLG+G + P VK SE +K
Sbjct: 316 KVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELK 351
>gi|403306428|ref|XP_003943737.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Saimiri boliviensis
boliviensis]
Length = 4472
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 176/411 (42%), Gaps = 67/411 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
++ ++VWG N Q G L+ K P + N + +A G + AV
Sbjct: 2596 RTKVFVWGLNDKDQLG------GLKGSKIKVPSFSETLSALNV--VQVAGGSKSLFAVTV 2647
Query: 80 DGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPREN 135
+G ++ G G+LG G G P ++ L S VK ++ G H TA
Sbjct: 2648 EGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTV----- 2702
Query: 136 DGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
DG +++ WG+ PRL T I ++CGS H AL+
Sbjct: 2703 DG-----KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSS 2755
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGP--RVIKGYAKFLDEAPELEKITQVSCG--EYHSA 241
G L WG EYG+LG G L+ +V+ G+ ++ QV+CG + +
Sbjct: 2756 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-----------RVIQVACGSRDAQTL 2804
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A+++ G V++WG G G+LG + + +P+ + L+G + + CG S ALT
Sbjct: 2805 ALTDEGLVFSWGDGDFGKLGRGGSEGCN---VPQNIERLNGQGVCQIECGAQFSLALTKS 2861
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLV 359
G ++ WG +LG G SD + R ++ G ++V A G H L
Sbjct: 2862 GVVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 2909
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
G+++ WG N +GQ N +T P+ V G+ + ++A G HS
Sbjct: 2910 VTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 2960
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 2706 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 2757
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 2758 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 2810
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 2811 LVFSWGDG---DFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 2867
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV+++G+VY
Sbjct: 2868 GKGDYFRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDSGQVYA 2918
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 2919 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 2964
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 2645 VTVEGKVYACGEATNGRLGLGLSSGTVPIPRQI-----TALSSYMVKKVAVHSGGRHATA 2699
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+
Sbjct: 2700 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------ 2753
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 2754 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 2807
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 2808 DEGLVFSWGDGDFGKLGRG-GSEGCNVPQNI--------ERLNGQGVCQIECGAQFSLAL 2858
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH S K P+ V L G I VA G +H A+T G
Sbjct: 2859 TKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDSGQ 2915
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 2916 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 2962
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 143/326 (43%), Gaps = 50/326 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +D+A G H+A V + G
Sbjct: 3698 VYSWGEAEDGKLGHGSRSPCDR------PRVIESLRGIEV--VDVAAGGAHSACVTAAGD 3749
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG E + P+ V+ LQ V I+CG+ + +D T+
Sbjct: 3750 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC--LTDDDTV--- 3804
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 3805 --WSWGDGDYGKLGRGGSDGCKVPTKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 3862
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 3863 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 3913
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G + VACG H+ AW S+
Sbjct: 3914 NDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAWSTSKPTS 3961
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPI 340
G P + +P E + + + IPI
Sbjct: 3962 AGKLP-----AQVPMECN-HLQEIPI 3981
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 177/412 (42%), Gaps = 78/412 (18%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P C A A R + + G + AV +DG
Sbjct: 3592 IYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALATLRPVQLIGGEQTLFAVTADG 3642
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 3643 KLYATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSE------- 3695
Query: 139 ISTSRLWVWGQNQGSNFPRLFWGAFTP-----------NTIICQVSCGSVHVVALSECGL 187
++ WG+ + +L G+ +P + V+ G H ++ G
Sbjct: 3696 ---GEVYSWGEAEDG---KLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGD 3749
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSE 245
L WG YG+LG + + L+ P+++ EA + ++ ++C G+ + +++
Sbjct: 3750 LYTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVVDIACGSGDAQTLCLTD 3800
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+ V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 3801 DDTVWSWGDGDYGKLGR---GGSDGCKVPTKIDSLTGLGVVKVECGSQFSVALTKSGAVY 3857
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHT 357
WG +LG G SD + R P VQ +A G H
Sbjct: 3858 TWGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHC 3899
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
+ DG ++ WG N GQ + + P V G +V ++A G H+
Sbjct: 3900 VCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 3951
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 128/276 (46%), Gaps = 25/276 (9%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N + P+L G + N + H +AL+ G + +WG + G+LG G
Sbjct: 160 RVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG 219
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P+ I ++ + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 220 DTVP-LEEPKAISAFSG----KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 274
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + E +P V L G+ + DVACG + A+T G +++WG G+LG G
Sbjct: 275 ---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 331
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D V V CG ++ +DG+++ WG +
Sbjct: 332 DGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 379
Query: 379 NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ + YP ++ G +V +AAG H L +
Sbjct: 380 HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 415
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 124/253 (49%), Gaps = 30/253 (11%)
Query: 134 ENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N +GS + + QV+ GS + A++
Sbjct: 2590 ESTATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2648
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + A G G+LG G++ + PR I + ++ K V G H+ A++
Sbjct: 2649 GKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYM------VKKVAVHSGGRHATALTV 2702
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS ALTS G LY
Sbjct: 2703 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELY 2759
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRD 363
WG + G+LG G T L P + + +L+ +Q VACG + TL +
Sbjct: 2760 TWGLGEYGRLGHGDNTT--QLKP-------KMVKVLLGHRVIQ-VACGSRDAQTLALTDE 2809
Query: 364 GRIHGWGYNSYGQ 376
G + WG +G+
Sbjct: 2810 GLVFSWGDGDFGK 2822
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 135/310 (43%), Gaps = 53/310 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHC 125
+ G +H A++S+G +++WG E G+LG G+ P ++ L+ E V + GAH
Sbjct: 3682 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHS 3741
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCG 175
A L+ WG+ + P+L A + ++ ++CG
Sbjct: 3742 ACVTA----------AGDLYTWGKGRYGRLGHSDSEDQLKPKLV-EALQGHRVV-DIACG 3789
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + L++ + +WG +YG+LGRG +G + P I + +V
Sbjct: 3790 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPTKIDSLTGL--------GVVKV 3840
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G VYTWG G +LGH S D PR+V L G + +A G +
Sbjct: 3841 ECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSL 3897
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLV 350
H T G +Y WG + GQLG G T P LV V V
Sbjct: 3898 HCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRV 3944
Query: 351 ACGHSHTLVY 360
ACG +HTL +
Sbjct: 3945 ACGSAHTLAW 3954
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 45/285 (15%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+L A N + H A+A+ G +++WG + G+LG G + P+ +
Sbjct: 171 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKAI 230
Query: 109 KQLQ----SEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT 164
+ V I+CG+ +AAI E L+ WG+ N+ RL G+
Sbjct: 231 SAFSGKQAGKHVVHIACGSTYSAAITAEGE---------LYTWGRG---NYGRLGHGSSE 278
Query: 165 PNTI-----------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
I + V+CGS +A++E G + +WG +YG+LGRG +G + P
Sbjct: 279 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTP 337
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
++I+ + +V CG S A++++G+VY+WG G +LGH G +E
Sbjct: 338 KLIEKLQDL--------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH-----GTEE 384
Query: 272 LL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ P+ + L G + DVA G H ALT +++WG + Q
Sbjct: 385 HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 429
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 136/293 (46%), Gaps = 33/293 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG G+ G G L PK + G AG + + IACG ++AA
Sbjct: 199 LAATGEVYSWGCGDGGRLGH-GDTVPLEEPKAIS-AFSGKQAGKHV--VHIACGSTYSAA 254
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E P V L+ V ++CG+ +A
Sbjct: 255 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA------ 308
Query: 137 GTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
++W WG R G TP I + +V CGS +AL++ G +
Sbjct: 309 -VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQV 367
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG + +LG G T E ++ P++++G + +K+ V+ G H A++E+ E
Sbjct: 368 YSWGKGDNQRLGHG-TEEHVRYPKLLEGL--------QGKKVIDVAAGSTHCLALTEDSE 418
Query: 249 VYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
V++W GS Q H +L+ E P + LD I +ACG S A +S
Sbjct: 419 VHSW--GSNDQCQHFDTLRVTKPE--PAALPGLDTKHIVGIACGPAQSFAWSS 467
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 138/338 (40%), Gaps = 26/338 (7%)
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEP 132
T + GT++ WG N GQLG K P + L + V+ I A A+
Sbjct: 3583 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 3642
Query: 133 RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
+ G + + P L V+ G H +ALS G + +WG
Sbjct: 3643 KLYATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 3702
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
E G+LG G + PRVI+ ++ V+ G HSA V+ G++YTW
Sbjct: 3703 EAEDGKLGHG-SRSPCDRPRVIESLRGI--------EVVDVAAGGAHSACVTAAGDLYTW 3753
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGS 310
G G G+LGH + +L P+ V AL G + D+ACG + LT +++WG
Sbjct: 3754 GKGRYGRLGH---SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDG 3810
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWG 370
G+LG G +P + D+ + GV V CG ++ + G ++ WG
Sbjct: 3811 DYGKLGRG--GSDGCKVPTKIDS--------LTGLGVVKVECGSQFSVALTKSGAVYTWG 3860
Query: 371 YNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGH 407
Y + + + P V G +V +A G H
Sbjct: 3861 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 3898
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 97/212 (45%), Gaps = 28/212 (13%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ ++CGS + A++ G L WG YG+LG G + E P ++ G
Sbjct: 242 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-SSEDEAIPMLVAGLKGL-------- 292
Query: 229 KITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
K+ V+CG + + AV+ENG+V++WG G G+LG D P+ + L + +
Sbjct: 293 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR---GGSDGCKTPKLIEKLQDLDVV 349
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
V CG S ALT G +Y+WG +LG G ++ + R +L G
Sbjct: 350 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG------------TEEHVRYPKLLEGLQG 397
Query: 347 VQL--VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
++ VA G +H L D +H WG N Q
Sbjct: 398 KKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 429
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 100/222 (45%), Gaps = 46/222 (20%)
Query: 166 NTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAP 225
N + Q++C + LS G + YN P++++G A +
Sbjct: 139 NLGVTQIACAEKRFLILSRSGRVYTQAYNS-----------DTLAPQLVQGLA-----SR 182
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI 283
+ KI S G +H A++ GEVY+WG G G+LGH GD L P+ + A G
Sbjct: 183 NIVKIAAHSDG-HHYLALAATGEVYSWGCGDGGRLGH-----GDTVPLEEPKAISAFSGK 236
Query: 284 ----FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIP 339
+ +ACG +S A+T++G LY WG G+LG G + IP
Sbjct: 237 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-------------SSEDEAIP 283
Query: 340 ILVV-PNGVQL--VAC--GHSHTLVYMRDGRIHGWGYNSYGQ 376
+LV G+++ VAC G + TL +G++ WG YG+
Sbjct: 284 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 325
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG + G G + +R P+Q+ + + IA G H DG
Sbjct: 3855 AVYTWGKGDYHRLGH-GSDDHVRRPRQVQ-------GLQGKKVIAIATGSLHCVCCTEDG 3906
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
++TWG N+ GQLGDGT + P V LQ + V ++CG+ T A
Sbjct: 3907 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 3953
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 74/186 (39%), Gaps = 22/186 (11%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+TQ++C E +S +G VYT S L P+ V L I +A
Sbjct: 142 VTQIACAEKRFLILSRSGRVYTQAYNS-------------DTLAPQLVQGLASRNIVKIA 188
Query: 290 C--GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
G H AL + G +Y+WG G+LG G +P E V
Sbjct: 189 AHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPLEEPKAISAFSGKQAGKHV 242
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGG 406
+ACG +++ +G ++ WG +YG+ + S P V G +V +A G G
Sbjct: 243 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSG 302
Query: 407 HSAVLA 412
+ LA
Sbjct: 303 DAQTLA 308
>gi|41053397|ref|NP_956285.1| RCC1 and BTB domain-containing protein 1 [Danio rerio]
gi|28278439|gb|AAH45877.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Danio rerio]
gi|182890896|gb|AAI65711.1| Rcbtb1 protein [Danio rerio]
Length = 531
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 119/401 (29%), Positives = 173/401 (43%), Gaps = 61/401 (15%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ D ++ G N LG G + P+K+ L + + S+S G+ + D
Sbjct: 37 ITHDDEVYVLGLNCSNCLGTGDSQSTIAPKKLDCLSGKKLISLSYGSGPHVLLVT---ED 93
Query: 137 GTISTSRLWVWGQNQGSNFPR---------LFWGAFTPNTIICQVSCGSVHVVALSECGL 187
G L+ WG N S + + +VSCGS H +AL+ G
Sbjct: 94 G-----ELYAWGHNGYSQLGNGTTNQGVSPILVSTNLQGKRVTEVSCGSHHSLALTHEGE 148
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWGYN GQ+G G T PR + + + I ++CG+ S AV++NG
Sbjct: 149 VFAWGYNNCGQVGSGSTANQ-PTPRKVSN-------CLQNKVIVNIACGQTSSMAVTDNG 200
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
EVY WG GQLG L + +L P R++AL G + +A G HS ALT +G LYAW
Sbjct: 201 EVYGWGYNGNGQLG---LGNNGNQLTPCRLIALQGFCVLQIASGYAHSLALTDEGLLYAW 257
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRI 366
G + GQLG G ++ S P + T I V++ AC +HT + G++
Sbjct: 258 GANTYGQLGTGNKSNQLS--PVQVMTEKERI--------VEIAACHSTHTSAAKTQSGQV 307
Query: 367 HGWGYNSYGQA---------ANEKSTYAWYPSP-VDWCVGEVRKLAAGGGHSAVLADACS 416
+ WG GQA A+ +A + +P V W R L+ H L A S
Sbjct: 308 YMWG-QCRGQAIVLPHLTHFASTDDVFACFATPSVMW-----RMLSM--EHDDFLTVAQS 359
Query: 417 LKELCEFRLAESVTLSNASEIEDVASRTGSEALARLCERLR 457
LK+ EF E+ L + I+ L CE R
Sbjct: 360 LKK--EFDNPETSDLEFS--IDGKYIHVHKAVLKIRCEHFR 396
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 145/336 (43%), Gaps = 50/336 (14%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
I G +A I +YV G N S G G + PK+L C +G L
Sbjct: 26 IFGASANEAIYITHDDEVYVLGLNCSNCLG-TGDSQSTIAPKKLD-----CLSGKKLISL 79
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAH 124
G H V DG L+ WG N + QLG+GT P V LQ + V +SCG+H
Sbjct: 80 SYGSG-PHVLLVTEDGELYAWGHNGYSQLGNGTTNQGVSPILVSTNLQGKRVTEVSCGSH 138
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQ------GSN----FPRLFWGAFTPNTIICQVSC 174
+ A+ E ++ WG N GS PR N +I ++C
Sbjct: 139 HSLALTHEGE---------VFAWGYNNCGQVGSGSTANQPTPRKVSNCL-QNKVIVNIAC 188
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVI--KGYAKFLDEAPELEKITQ 232
G +A+++ G + WGYN GQLG G L R+I +G+ + Q
Sbjct: 189 GQTSSMAVTDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLIALQGFC-----------VLQ 237
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVAC 290
++ G HS A+++ G +Y WG + GQLG +G+K +L P +V+ ++ AC
Sbjct: 238 IASGYAHSLALTDEGLLYAWGANTYGQLG-----TGNKSNQLSPVQVMTEKERIVEIAAC 292
Query: 291 GGVH-SCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
H S A T G +Y WG + GQ + P F+
Sbjct: 293 HSTHTSAAKTQSGQVYMWGQCR-GQAIVLPHLTHFA 327
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 18/150 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WGYN +GQ G QL + + + F L IA G+ H+ A+ +G
Sbjct: 202 VYGWGYNGNGQLGLGNNGNQLTPCRLIALQGFCV--------LQIASGYAHSLALTDEGL 253
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+ WGAN +GQLG G + + P +V + V+ +C + T+A +
Sbjct: 254 LYAWGANTYGQLGTGNKSNQLSPVQVMTEKERIVEIAACHSTHTSA--------AKTQSG 305
Query: 143 RLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
++++WGQ +G P L A T + C
Sbjct: 306 QVYMWGQCRGQAIVLPHLTHFASTDDVFAC 335
>gi|397515765|ref|XP_003828114.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
[Pan paniscus]
Length = 4839
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 176/411 (42%), Gaps = 67/411 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
++ ++VWG N Q G L+ K P + N + +A G + AV
Sbjct: 2963 RTKVFVWGLNDKDQLG------GLKGSKIKVPSFSETLSALNV--VQVAGGSKSLFAVTV 3014
Query: 80 DGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPREN 135
+G ++ G G+LG G G P ++ L S VK ++ G H TA
Sbjct: 3015 EGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV----- 3069
Query: 136 DGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
DG +++ WG+ PRL T I ++CGS H AL+
Sbjct: 3070 DG-----KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSS 3122
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGP--RVIKGYAKFLDEAPELEKITQVSCG--EYHSA 241
G L WG EYG+LG G L+ +V+ G+ ++ QV+CG + +
Sbjct: 3123 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-----------RVIQVACGSRDAQTL 3171
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A+++ G V++WG G G+LG + + +P+ + L+G + + CG S ALT
Sbjct: 3172 ALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTKS 3228
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLV 359
G ++ WG +LG G SD + R ++ G ++V A G H L
Sbjct: 3229 GVVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3276
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
G+++ WG N +GQ N +T P+ V G+ + ++A G HS
Sbjct: 3277 VTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3327
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3073 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 3124
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 3125 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 3177
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 3178 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3234
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV+++G+VY
Sbjct: 3235 GKGDYFRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDSGQVYA 3285
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3286 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3331
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 3012 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQI-----TALSSYVVKKVAVHSGGRHATA 3066
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+
Sbjct: 3067 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------ 3120
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 3121 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3174
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 3175 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 3225
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH S K P+ V L G I VA G +H A+T G
Sbjct: 3226 TKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDSGQ 3282
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 3283 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3329
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 144/327 (44%), Gaps = 50/327 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +D+A G H+A V + G
Sbjct: 4065 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRGIEV--VDVAAGGAHSACVTAAGD 4116
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG E + P+ V+ LQ V I+CG+ + +D T+
Sbjct: 4117 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC--LTDDDTV--- 4171
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 4172 --WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4229
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 4230 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4280
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G + VACG H+ AW S+
Sbjct: 4281 NDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAWSTSKPAS 4328
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPIL 341
G P + +P E + + + IPI+
Sbjct: 4329 AGKLP-----AQVPMEYN-HLQEIPII 4349
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 174/411 (42%), Gaps = 76/411 (18%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P C A A R + + G + AV +DG
Sbjct: 3959 IYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALATLRPVQLIGGEQTLFAVTADG 4009
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 4010 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE------- 4062
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG+ + PR+ + V+ G H ++ G L
Sbjct: 4063 ---GEVYSWGEAEDGKLGHGNRSPCDRPRVIES--LRGIEVVDVAAGGAHSACVTAAGDL 4117
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSEN 246
WG YG+LG + + L+ P+++ EA + ++ ++C G+ + ++++
Sbjct: 4118 YTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVVDIACGSGDAQTLCLTDD 4168
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4169 DTVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 4225
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTL 358
WG +LG G SD + R P VQ +A G H +
Sbjct: 4226 WGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCV 4267
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
DG ++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4268 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4318
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 129/276 (46%), Gaps = 25/276 (9%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N + P+L G + N + H +AL+ G + +WG + G+LG G
Sbjct: 417 RVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG 476
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P+VI ++ + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 477 DTVP-LEEPKVISAFSG----KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 531
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + E +P V L G+ + DVACG + A+T G +++WG G+LG G
Sbjct: 532 ---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 588
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D V V CG ++ +DG+++ WG +
Sbjct: 589 DGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 636
Query: 379 NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ + YP ++ G +V +AAG H L +
Sbjct: 637 HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 672
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 122/253 (48%), Gaps = 30/253 (11%)
Query: 134 ENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N +GS + + QV+ GS + A++
Sbjct: 2957 ESAATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3015
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + A G G+LG GI+ + PR I + ++ K V G H+ A++
Sbjct: 3016 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYV------VKKVAVHSGGRHATALTV 3069
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS ALTS G LY
Sbjct: 3070 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELY 3126
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRD 363
WG + G+LG G T + + +L+ +Q VACG + TL +
Sbjct: 3127 TWGLGEYGRLGHGDNTTQLKP---------KMVKVLLGHRVIQ-VACGSRDAQTLALTDE 3176
Query: 364 GRIHGWGYNSYGQ 376
G + WG +G+
Sbjct: 3177 GLVFSWGDGDFGK 3189
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 134/310 (43%), Gaps = 53/310 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHC 125
+ G +H A++S+G +++WG E G+LG G P ++ L+ E V + GAH
Sbjct: 4049 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4108
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCG 175
A L+ WG+ + P+L A + ++ ++CG
Sbjct: 4109 ACVTA----------AGDLYTWGKGRYGRLGHSDSEDQLKPKLV-EALQGHRVV-DIACG 4156
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + L++ + +WG +YG+LGRG +G + P I + +V
Sbjct: 4157 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVKV 4207
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G VYTWG G +LGH S D PR+V L G + +A G +
Sbjct: 4208 ECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSL 4264
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLV 350
H T G +Y WG + GQLG G T P LV V V
Sbjct: 4265 HCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRV 4311
Query: 351 ACGHSHTLVY 360
ACG +HTL +
Sbjct: 4312 ACGSAHTLAW 4321
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 45/285 (15%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+L A N + H A+A+ G +++WG + G+LG G + P+ +
Sbjct: 428 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVI 487
Query: 109 KQLQ----SEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT 164
+ V I+CG+ +AAI E L+ WG+ N+ RL G+
Sbjct: 488 SAFSGKQAGKHVVHIACGSTYSAAITAEGE---------LYTWGRG---NYGRLGHGSSE 535
Query: 165 PNTI-----------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
I + V+CGS +A++E G + +WG +YG+LGRG +G + P
Sbjct: 536 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTP 594
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
++I+ + +V CG S A++++G+VY+WG G +LGH G +E
Sbjct: 595 KLIEKLQDL--------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH-----GTEE 641
Query: 272 LL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ P+ + L G + DVA G H ALT +++WG + Q
Sbjct: 642 HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 686
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 136/293 (46%), Gaps = 33/293 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG G+ G G L PK + G AG + + IACG ++AA
Sbjct: 456 LAATGEVYSWGCGDGGRLGH-GDTVPLEEPKVIS-AFSGKQAGKHV--VHIACGSTYSAA 511
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E P V L+ V ++CG+ +A
Sbjct: 512 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA------ 565
Query: 137 GTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
++W WG R G TP I + +V CGS +AL++ G +
Sbjct: 566 -VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQV 624
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG + +LG G T E ++ P++++G + +K+ V+ G H A++E+ E
Sbjct: 625 YSWGKGDNQRLGHG-TEEHVRYPKLLEGL--------QGKKVIDVAAGSTHCLALTEDSE 675
Query: 249 VYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
V++W GS Q H +L+ E P + LD I +ACG S A +S
Sbjct: 676 VHSW--GSNDQCQHFDTLRVTKPE--PAALPGLDTKHIVGIACGPAQSFAWSS 724
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 139/340 (40%), Gaps = 63/340 (18%)
Query: 56 CPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
C AN IAC + ++ +G ++T N P+ V+ L S
Sbjct: 391 CEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRN 440
Query: 116 VKSISCGA--HCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAF 163
+ I+ + H A+A +T ++ WG G P++ AF
Sbjct: 441 IVKIAAHSDGHHYLALA---------ATGEVYSWGCGDGGRLGHGDTVPLEEPKVI-SAF 490
Query: 164 TPNTI---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF 220
+ + ++CGS + A++ G L WG YG+LG G + E P ++ G
Sbjct: 491 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-SSEDEAIPMLVAGLKGL 549
Query: 221 LDEAPELEKITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
K+ V+CG + + AV+ENG+V++WG G G+LG D P+ +
Sbjct: 550 --------KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR---GGSDGCKTPKLIE 598
Query: 279 ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
L + + V CG S ALT G +Y+WG +LG G ++ + R
Sbjct: 599 KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG------------TEEHVRYP 646
Query: 339 PILVVPNGVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+L G ++ VA G +H L D +H WG N Q
Sbjct: 647 KLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 686
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 110/281 (39%), Gaps = 69/281 (24%)
Query: 186 GLLQAWGYNEYGQLGRGI---------TCEGLQGPRVIK--------------------G 216
G + WG+N GQLG GI CE L R ++ G
Sbjct: 3957 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4015
Query: 217 Y----------AKFLDEAPELEKITQ-------VSCGEYHSAAVSENGEVYTWGLGSVGQ 259
Y + + LE I V+ G H A+S GEVY+WG G+
Sbjct: 4016 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4075
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LGH + D+ PR + +L GI + DVA GG HS +T+ G LY WG + G+LG
Sbjct: 4076 LGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG--- 4129
Query: 320 QTRSFSLIPNESDTYFRNIPILVVP---NGVQLVAC--GHSHTLVYMRDGRIHGWGYNSY 374
SD+ + P LV + V +AC G + TL D + WG Y
Sbjct: 4130 ----------HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDY 4179
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADA 414
G+ S P +D G V K+ G S L +
Sbjct: 4180 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4220
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG + G G + +R P+Q+ + + IA G H DG
Sbjct: 4222 AVYTWGKGDYHRLGH-GSDDHVRRPRQVQ-------GLQGKKVIAIATGSLHCVCCTEDG 4273
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
++TWG N+ GQLGDGT + P V LQ + V ++CG+ T A
Sbjct: 4274 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4320
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 74/186 (39%), Gaps = 22/186 (11%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+TQ++C E +S NG VYT S L P+ V L I +A
Sbjct: 399 VTQIACAEKRFLILSRNGRVYTQAYNS-------------DTLAPQLVQGLASRNIVKIA 445
Query: 290 C--GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
G H AL + G +Y+WG G+LG G +P E V
Sbjct: 446 AHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPLEEPKVISAFSGKQAGKHV 499
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGG 406
+ACG +++ +G ++ WG +YG+ + S P V G +V +A G G
Sbjct: 500 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSG 559
Query: 407 HSAVLA 412
+ LA
Sbjct: 560 DAQTLA 565
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 82/218 (37%), Gaps = 62/218 (28%)
Query: 246 NGEVYTWGLGSVGQLG--------------------HCSLQSGDKELL------------ 273
+G +Y WG GQLG L G++ L
Sbjct: 3956 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4015
Query: 274 -----------------PRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWGGSQAGQ 314
P + ++ +FIK VA GG H AL+S+G +Y+WG ++ G+
Sbjct: 4016 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4075
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LG G RS P ++ R I ++ VA G +H+ G ++ WG Y
Sbjct: 4076 LGHG--NRSPCDRPRVIES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRY 4125
Query: 375 GQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
G+ + S P V+ G V +A G G + L
Sbjct: 4126 GRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTL 4163
>gi|397488796|ref|XP_003815430.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Pan
paniscus]
Length = 815
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/360 (29%), Positives = 167/360 (46%), Gaps = 36/360 (10%)
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
N + ++CG EH+A V + L+ +G+N +GQLG G++ P VK L+ E VK +
Sbjct: 34 NDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAA 93
Query: 121 CGAHCTAAIAE--PRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVH 178
CG + T E G + +L + + + F + + FT I Q+S GS
Sbjct: 94 CGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISF--FTSEHKIKQLSAGSNT 151
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
AL+E G L WG N GQ+G +V G + ++ +SCG Y
Sbjct: 152 SAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIG-----------KPVSWISCGYY 200
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
HSA V+ +GE+Y +G G+LG + G+ P+ V + I+ VACGG H+ L
Sbjct: 201 HSAFVTTDGELYVFGEPENGKLGLPNQLLGNHR-TPQLVSEIPEKVIQ-VACGGEHTVVL 258
Query: 299 TSKGALYAWGGSQAGQLGLGP---QTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS 355
T + A+Y +G Q GQLGLG +T +I N D + ++CG +
Sbjct: 259 T-ENAVYTFGLGQFGQLGLGTFLFETSEPKVIENIRD------------QTISYISCGEN 305
Query: 356 HTLVYMRDGRIHGWGYNSYGQ--AANEKSTYAWYPSPVDWCVGEVRKLAA-GGGHSAVLA 412
HT + G ++ +G +G+ E T + P+ + + KL A GG H + A
Sbjct: 306 HTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVIFA 365
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 121/284 (42%), Gaps = 51/284 (17%)
Query: 144 LWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
++ +G+++ N P FW N + +SCG H ++ L +G N +GQLG G
Sbjct: 14 VFTFGKSKFAENNPGKFWFK---NDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLG 70
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
+ + P +K A + EK+ +CG H+ +E G VY G + GQLG
Sbjct: 71 -SKSAVSKPTCVK--------ALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLG- 120
Query: 263 CSLQSGDKELLPRRVVALDGIF-----IKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GD E R + F IK ++ G S ALT G L+ WG + GQ+GL
Sbjct: 121 ----LGDTE--ERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGL 174
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQL------VACGHSHTLVYMRDGRIHGWGY 371
+N+ + VP V + ++CG+ H+ DG ++ +G
Sbjct: 175 ------------------KNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVFGE 216
Query: 372 NSYGQAANEKSTYAWYPSP--VDWCVGEVRKLAAGGGHSAVLAD 413
G+ + +P V +V ++A GG H+ VL +
Sbjct: 217 PENGKLGLPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTE 260
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 89/196 (45%), Gaps = 40/196 (20%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+++WG N GQ G K + +P+Q+ G P W I+CG+ H+A V +DG
Sbjct: 161 LFMWGDNSEGQIGLKNV-SNVCVPQQV---TIGKPVS----W--ISCGYYHSAFVTTDGE 210
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF---VKSISCGAHCTAAIAEPRENDGTI 139
L+ +G E G+LG + H + QL SE V ++CG T + E
Sbjct: 211 LYVFGEPENGKLGLPNQLLGNH--RTPQLVSEIPEKVIQVACGGEHTVVLTE-------- 260
Query: 140 STSRLWVWGQNQGSNFPRLFWGAF-----TPNTI-------ICQVSCGSVHVVALSECGL 187
+ ++ +G Q F +L G F P I I +SCG H +++ GL
Sbjct: 261 --NAVYTFGLGQ---FGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGL 315
Query: 188 LQAWGYNEYGQLGRGI 203
+ +G +G+LG G+
Sbjct: 316 MYTFGDGRHGKLGLGL 331
>gi|297296008|ref|XP_001109429.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Macaca
mulatta]
Length = 4840
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 176/411 (42%), Gaps = 67/411 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
++ ++VWG N Q G L+ K P + N + +A G + AV
Sbjct: 2958 RTKVFVWGLNDKDQLG------GLKGSKIKVPSFSETLSALNV--VQVAGGSKSLFAVTV 3009
Query: 80 DGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPREN 135
+G ++ G G+LG G G P ++ L S VK ++ G H TA
Sbjct: 3010 EGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV----- 3064
Query: 136 DGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
DG +++ WG+ PRL T I ++CGS H AL+
Sbjct: 3065 DG-----KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSS 3117
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGP--RVIKGYAKFLDEAPELEKITQVSCG--EYHSA 241
G L WG EYG+LG G L+ +V+ G+ ++ QV+CG + +
Sbjct: 3118 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-----------RVIQVACGSRDAQTL 3166
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A+++ G V++WG G G+LG + + +P+ + L+G + + CG S ALT
Sbjct: 3167 ALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTKS 3223
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLV 359
G ++ WG +LG G SD + R ++ G ++V A G H L
Sbjct: 3224 GVVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3271
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
G+++ WG N +GQ N +T P+ V G+ + ++A G HS
Sbjct: 3272 VTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3322
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3068 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 3119
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 3120 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 3172
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 3173 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3229
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV+++G+VY
Sbjct: 3230 GKGDYFRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDSGQVYA 3280
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3281 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3326
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 3007 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQI-----TALSSYVVKKVAVHSGGRHATA 3061
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+
Sbjct: 3062 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------ 3115
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 3116 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3169
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 3170 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 3220
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH S K P+ V L G I VA G +H A+T G
Sbjct: 3221 TKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDSGQ 3277
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 3278 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3324
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 144/327 (44%), Gaps = 50/327 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +D+A G H+A V + G
Sbjct: 4091 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRGIEV--VDVAAGGAHSACVTAAGD 4142
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG E + P+ V+ LQ V I+CG+ + +D T+
Sbjct: 4143 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC--LTDDDTV--- 4197
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 4198 --WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4255
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 4256 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4306
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G + VACG H+ AW S+
Sbjct: 4307 NDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAWSTSKPAS 4354
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPIL 341
G P + +P E + + + IPI+
Sbjct: 4355 AGKLP-----AQVPMEYN-HLQEIPII 4375
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 174/411 (42%), Gaps = 76/411 (18%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P C A A R + + G + AV +DG
Sbjct: 3985 IYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALATLRPVQLIGGEQTLFAVTADG 4035
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 4036 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE------- 4088
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG+ + PR+ + V+ G H ++ G L
Sbjct: 4089 ---GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAGDL 4143
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSEN 246
WG YG+LG + + L+ P+++ EA + ++ ++C G+ + ++++
Sbjct: 4144 YTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVVDIACGSGDAQTLCLTDD 4194
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4195 DTVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 4251
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTL 358
WG +LG G SD + R P VQ +A G H +
Sbjct: 4252 WGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCV 4293
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
DG ++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4294 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4344
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 129/276 (46%), Gaps = 25/276 (9%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N + P+L G + N + H +AL+ G + +WG + G+LG G
Sbjct: 471 RVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG 530
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P+VI ++ + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 531 DTVP-LEEPKVISAFSG----KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 585
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + E +P V L G+ + DVACG + A+T G +++WG G+LG G
Sbjct: 586 ---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 642
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D V V CG ++ +DG+++ WG +
Sbjct: 643 DGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 690
Query: 379 NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ + YP ++ G +V +AAG H L +
Sbjct: 691 HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 124/253 (49%), Gaps = 30/253 (11%)
Query: 134 ENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N +GS + + QV+ GS + A++
Sbjct: 2952 ESAATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + A G G+LG GI+ + PR I + ++ K V G H+ A++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYV------VKKVAVHSGGRHATALTV 3064
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS ALTS G LY
Sbjct: 3065 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELY 3121
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRD 363
WG + G+LG G T L P + + +L+ +Q VACG + TL +
Sbjct: 3122 TWGLGEYGRLGHGDNTT--QLKP-------KMVKVLLGHRVIQ-VACGSRDAQTLALTDE 3171
Query: 364 GRIHGWGYNSYGQ 376
G + WG +G+
Sbjct: 3172 GLVFSWGDGDFGK 3184
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 134/310 (43%), Gaps = 53/310 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHC 125
+ G +H A++S+G +++WG E G+LG G P ++ L+ E V + GAH
Sbjct: 4075 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4134
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCG 175
A L+ WG+ + P+L A + ++ ++CG
Sbjct: 4135 ACVTA----------AGDLYTWGKGRYGRLGHSDSEDQLKPKLV-EALQGHRVV-DIACG 4182
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + L++ + +WG +YG+LGRG +G + P I + +V
Sbjct: 4183 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVKV 4233
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G VYTWG G +LGH S D PR+V L G + +A G +
Sbjct: 4234 ECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSL 4290
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLV 350
H T G +Y WG + GQLG G T P LV V V
Sbjct: 4291 HCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRV 4337
Query: 351 ACGHSHTLVY 360
ACG +HTL +
Sbjct: 4338 ACGSAHTLAW 4347
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 45/285 (15%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+L A N + H A+A+ G +++WG + G+LG G + P+ +
Sbjct: 482 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVI 541
Query: 109 KQLQ----SEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT 164
+ V I+CG+ +AAI E L+ WG+ N+ RL G+
Sbjct: 542 SAFSGKQAGKHVVHIACGSTYSAAITAEGE---------LYTWGRG---NYGRLGHGSSE 589
Query: 165 PNTI-----------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
I + V+CGS +A++E G + +WG +YG+LGRG +G + P
Sbjct: 590 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTP 648
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
++I+ + +V CG S A++++G+VY+WG G +LGH G +E
Sbjct: 649 KLIEKLQDL--------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH-----GTEE 695
Query: 272 LL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ P+ + L G + DVA G H ALT +++WG + Q
Sbjct: 696 HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 136/293 (46%), Gaps = 33/293 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG G+ G G L PK + G AG + + IACG ++AA
Sbjct: 510 LAATGEVYSWGCGDGGRLGH-GDTVPLEEPKVIS-AFSGKQAGKHV--VHIACGSTYSAA 565
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E P V L+ V ++CG+ +A
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA------ 619
Query: 137 GTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
++W WG R G TP I + +V CGS +AL++ G +
Sbjct: 620 -VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQV 678
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG + +LG G T E ++ P++++G + +K+ V+ G H A++E+ E
Sbjct: 679 YSWGKGDNQRLGHG-TEEHVRYPKLLEGL--------QGKKVIDVAAGSTHCLALTEDSE 729
Query: 249 VYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
V++W GS Q H +L+ E P + LD I +ACG S A +S
Sbjct: 730 VHSW--GSNDQCQHFDTLRVTKPE--PAALPGLDTKHIVGIACGPAQSFAWSS 778
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 139/340 (40%), Gaps = 63/340 (18%)
Query: 56 CPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
C AN IAC + ++ +G ++T N P+ V+ L S
Sbjct: 445 CEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRN 494
Query: 116 VKSISCGA--HCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAF 163
+ I+ + H A+A +T ++ WG G P++ AF
Sbjct: 495 IVKIAAHSDGHHYLALA---------ATGEVYSWGCGDGGRLGHGDTVPLEEPKVI-SAF 544
Query: 164 TPNTI---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF 220
+ + ++CGS + A++ G L WG YG+LG G + E P ++ G
Sbjct: 545 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-SSEDEAIPMLVAGLKGL 603
Query: 221 LDEAPELEKITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
K+ V+CG + + AV+ENG+V++WG G G+LG D P+ +
Sbjct: 604 --------KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR---GGSDGCKTPKLIE 652
Query: 279 ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
L + + V CG S ALT G +Y+WG +LG G ++ + R
Sbjct: 653 KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG------------TEEHVRYP 700
Query: 339 PILVVPNGVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+L G ++ VA G +H L D +H WG N Q
Sbjct: 701 KLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 110/281 (39%), Gaps = 69/281 (24%)
Query: 186 GLLQAWGYNEYGQLGRGI---------TCEGLQGPRVIK--------------------G 216
G + WG+N GQLG GI CE L R ++ G
Sbjct: 3983 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4041
Query: 217 Y----------AKFLDEAPELEKITQ-------VSCGEYHSAAVSENGEVYTWGLGSVGQ 259
Y + + LE I V+ G H A+S GEVY+WG G+
Sbjct: 4042 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4101
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LGH + D+ PR + +L GI + DVA GG HS +T+ G LY WG + G+LG
Sbjct: 4102 LGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG--- 4155
Query: 320 QTRSFSLIPNESDTYFRNIPILVVP---NGVQLVAC--GHSHTLVYMRDGRIHGWGYNSY 374
SD+ + P LV + V +AC G + TL D + WG Y
Sbjct: 4156 ----------HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDY 4205
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADA 414
G+ S P +D G V K+ G S L +
Sbjct: 4206 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4246
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG + G G + +R P+Q+ + + IA G H DG
Sbjct: 4248 AVYTWGKGDYHRLGH-GSDDHVRRPRQVQ-------GLQGKKVIAIATGSLHCVCCTEDG 4299
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
++TWG N+ GQLGDGT + P V LQ + V ++CG+ T A
Sbjct: 4300 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4346
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 74/186 (39%), Gaps = 22/186 (11%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+TQ++C E +S NG VYT S L P+ V L I +A
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------------DTLAPQLVQGLASRNIVKIA 499
Query: 290 C--GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
G H AL + G +Y+WG G+LG G +P E V
Sbjct: 500 AHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPLEEPKVISAFSGKQAGKHV 553
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGG 406
+ACG +++ +G ++ WG +YG+ + S P V G +V +A G G
Sbjct: 554 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSG 613
Query: 407 HSAVLA 412
+ LA
Sbjct: 614 DAQTLA 619
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 82/218 (37%), Gaps = 62/218 (28%)
Query: 246 NGEVYTWGLGSVGQLG--------------------HCSLQSGDKELL------------ 273
+G +Y WG GQLG L G++ L
Sbjct: 3982 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4041
Query: 274 -----------------PRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWGGSQAGQ 314
P + ++ +FIK VA GG H AL+S+G +Y+WG ++ G+
Sbjct: 4042 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4101
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LG G RS P ++ R I ++ VA G +H+ G ++ WG Y
Sbjct: 4102 LGHG--NRSPCDRPRVIES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRY 4151
Query: 375 GQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
G+ + S P V+ G V +A G G + L
Sbjct: 4152 GRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTL 4189
>gi|194221881|ref|XP_001489975.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Equus
caballus]
Length = 531
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 149/366 (40%), Gaps = 81/366 (22%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G +A + ++V+G N+S G G + IPK+L G + L
Sbjct: 26 VFGTSANEALYVTDNDEVFVFGLNYSNCLG-TGDNQSTLIPKKLEA-----LCGKKIKSL 79
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
G H DG ++ WG N + QLG+GT P +V C
Sbjct: 80 SYGSG-PHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQV----------------C 122
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
T + + + +V+CGS H +AL+
Sbjct: 123 TNLLIKQ------------------------------------VVEVACGSHHSMALAAD 146
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + AWGYN GQ+G G T PR + ++++ ++CG+ S AV +
Sbjct: 147 GEVFAWGYNNCGQVGSGSTANQ-PTPRKVT-------NCLHIKRVVGIACGQTSSMAVLD 198
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
NGEVY WG GQLG L + +L P RV AL + + + CG H+ ALT +G LY
Sbjct: 199 NGEVYGWGYNGNGQLG---LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLY 255
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDG 364
AWG + GQLG G + S P + V++ AC +HT + G
Sbjct: 256 AWGANTYGQLGTGNKNNLLS--PAHIMVEKERV--------VEIAACHSAHTSAAKTQGG 305
Query: 365 RIHGWG 370
++ WG
Sbjct: 306 HVYMWG 311
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 114/238 (47%), Gaps = 34/238 (14%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HV+ +E G++ AWG+N Y QLG G T +G+ +V ++++ +V+CG
Sbjct: 86 HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLL--------IKQVVEVACGS 137
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV---ACGGVH 294
+HS A++ +GEV+ WG + GQ+G S + + PR+V + + IK V ACG
Sbjct: 138 HHSMALAADGEVFAWGYNNCGQVGSGSTAN---QPTPRKVT--NCLHIKRVVGIACGQTS 192
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG---VQLVA 351
S A+ G +Y WG + GQLGLG + P+ V V +
Sbjct: 193 SMAVLDNGEVYGWGYNGNGQLGLGNNGNQLT-------------PVRVAALHSVCVNQIV 239
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
CG++HTL +G ++ WG N+YGQ SP V + R + HSA
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLL--SPAHIMVEKERVVEIAACHSA 295
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 84/173 (48%), Gaps = 17/173 (9%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHSCALT 299
V++N EV+ +GL LG +GD + L+P+++ AL G IK ++ G G H T
Sbjct: 37 VTDNDEVFVFGLNYSNCLG-----TGDNQSTLIPKKLEALCGKKIKSLSYGSGPHVLLST 91
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
G +YAWG + QLG G + + I ++ L++ V+ VACG H++
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTN--------LLIKQVVE-VACGSHHSMA 142
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
DG + WGYN+ GQ + + P V C+ R + G ++ +A
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMA 195
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 68/154 (44%), Gaps = 20/154 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WGYN +GQ G QL P ++ C I CG+ HT A+ +G
Sbjct: 202 VYGWGYNGNGQLGLGNNGNQLT-PVRVAALHSVCVN-------QIVCGYAHTLALTDEGL 253
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
L+ WGAN +GQLG G + P + + V+ +C AH +AA +
Sbjct: 254 LYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQ---------G 304
Query: 142 SRLWVWGQNQGSN--FPRLFWGAFTPNTIICQVS 173
+++WGQ +G + P L + T + C S
Sbjct: 305 GHVYMWGQCRGQSVILPHLTHFSCTDDVFACFAS 338
>gi|187954501|gb|AAI40717.1| Hect domain and RLD 5 [Homo sapiens]
Length = 1024
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/258 (34%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I Q++CG H +ALS+ G L AWG N +GQLG G P++++ A
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGV-------- 191
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
+ Q+S GE HS A+S +G +Y+WG GQLG +S D P + LD ++ V
Sbjct: 192 PLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDD---PSLIEGLDNQKVEFV 248
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV---VPN 345
ACGG HS LT G L+ +G + GQLG N + R P LV V
Sbjct: 249 ACGGSHSALLTQDGLLFTFGAGKHGQLG-----------HNSTQNELR--PCLVAELVGY 295
Query: 346 GVQLVACGHSHTLVYMRD-GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL--- 401
V +ACG HTL Y+ D G++ +G GQ N + P PV E KL
Sbjct: 296 RVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESH 355
Query: 402 --------AAGGGHSAVL 411
AGG S +L
Sbjct: 356 TSEKELIMIAGGNQSILL 373
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 94/185 (50%), Gaps = 19/185 (10%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+KI Q++CG+YHS A+S+ GE++ WG GQLG + P+ V L G+ +
Sbjct: 138 KKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG--RKFPSTTTPQIVEHLAGVPLAQ 195
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV---P 344
++ G HS AL+ G +Y+WG ++ GQLGLG T ++ P L+
Sbjct: 196 ISAGEAHSMALSMSGNIYSWGKNECGQLGLG-------------HTESKDDPSLIEGLDN 242
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAA 403
V+ VACG SH+ + +DG + +G +GQ + + P V VG V ++A
Sbjct: 243 QKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIAC 302
Query: 404 GGGHS 408
G H+
Sbjct: 303 GRWHT 307
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 36/215 (16%)
Query: 62 SRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSIS 120
+ + I CG H+ A++ G LF WG N GQLG G + P+ V+ L + IS
Sbjct: 138 KKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQIS 197
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQN----------QGSNFPRLFWGAFTPNTIIC 170
G + A++ + ++ WG+N + + P L G N +
Sbjct: 198 AGEAHSMALS---------MSGNIYSWGKNECGQLGLGHTESKDDPSLIEG--LDNQKVE 246
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV--IKGYAKFLDEAPELE 228
V+CG H L++ GLL +G ++GQLG T L+ V + GY
Sbjct: 247 FVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGY----------- 295
Query: 229 KITQVSCGEYHSAA-VSENGEVYTWGLGSVGQLGH 262
++TQ++CG +H+ A VS+ G+V+++G G GQLG+
Sbjct: 296 RVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGN 330
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 91/190 (47%), Gaps = 15/190 (7%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G GR+ Q+ L G P I+ G H+ A++ G
Sbjct: 159 LFAWGQNLHGQLGV-GRKFPSTTTPQIVEHLAGVPLA------QISAGEAHSMALSMSGN 211
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST- 141
+++WG NE GQLG G E + P ++ L ++ V+ ++CG +A + + DG + T
Sbjct: 212 IYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQ----DGLLFTF 267
Query: 142 --SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYNEYGQ 198
+ G N N R A + Q++CG H +A +S+ G + ++G + GQ
Sbjct: 268 GAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQ 327
Query: 199 LGRGITCEGL 208
LG G T + L
Sbjct: 328 LGNGGTRDQL 337
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD-G 81
++ +G GQ G + +LR L EL G R IACG HT A SD G
Sbjct: 264 LFTFGAGKHGQLGHNSTQNELR--PCLVAELVG------YRVTQIACGRWHTLAYVSDLG 315
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVK 117
+F++G+ + GQLG+G + P VK SE +K
Sbjct: 316 KVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELK 351
>gi|110825982|ref|NP_057407.2| E3 ISG15--protein ligase HERC5 [Homo sapiens]
gi|296434523|sp|Q9UII4.2|HERC5_HUMAN RecName: Full=E3 ISG15--protein ligase HERC5; AltName:
Full=Cyclin-E-binding protein 1; AltName: Full=HECT
domain and RCC1-like domain-containing protein 5
gi|119626425|gb|EAX06020.1| hect domain and RLD 5 [Homo sapiens]
Length = 1024
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/258 (34%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I Q++CG H +ALS+ G L AWG N +GQLG G P++++ A
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGV-------- 191
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
+ Q+S GE HS A+S +G +Y+WG GQLG +S D P + LD ++ V
Sbjct: 192 PLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDD---PSLIEGLDNQKVEFV 248
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV---VPN 345
ACGG HS LT G L+ +G + GQLG N + R P LV V
Sbjct: 249 ACGGSHSALLTQDGLLFTFGAGKHGQLG-----------HNSTQNELR--PCLVAELVGY 295
Query: 346 GVQLVACGHSHTLVYMRD-GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL--- 401
V +ACG HTL Y+ D G++ +G GQ N + P PV E KL
Sbjct: 296 RVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESH 355
Query: 402 --------AAGGGHSAVL 411
AGG S +L
Sbjct: 356 TSEKELIMIAGGNQSILL 373
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 94/185 (50%), Gaps = 19/185 (10%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+KI Q++CG+YHS A+S+ GE++ WG GQLG + P+ V L G+ +
Sbjct: 138 KKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG--RKFPSTTTPQIVEHLAGVPLAQ 195
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV---P 344
++ G HS AL+ G +Y+WG ++ GQLGLG T ++ P L+
Sbjct: 196 ISAGEAHSMALSMSGNIYSWGKNECGQLGLG-------------HTESKDDPSLIEGLDN 242
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAA 403
V+ VACG SH+ + +DG + +G +GQ + + P V VG V ++A
Sbjct: 243 QKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIAC 302
Query: 404 GGGHS 408
G H+
Sbjct: 303 GRWHT 307
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 36/215 (16%)
Query: 62 SRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSIS 120
+ + I CG H+ A++ G LF WG N GQLG G + P+ V+ L + IS
Sbjct: 138 KKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQIS 197
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQN----------QGSNFPRLFWGAFTPNTIIC 170
G + A++ + ++ WG+N + + P L G N +
Sbjct: 198 AGEAHSMALS---------MSGNIYSWGKNECGQLGLGHTESKDDPSLIEG--LDNQKVE 246
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV--IKGYAKFLDEAPELE 228
V+CG H L++ GLL +G ++GQLG T L+ V + GY
Sbjct: 247 FVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGY----------- 295
Query: 229 KITQVSCGEYHSAA-VSENGEVYTWGLGSVGQLGH 262
++TQ++CG +H+ A VS+ G+V+++G G GQLG+
Sbjct: 296 RVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGN 330
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 91/190 (47%), Gaps = 15/190 (7%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G GR+ Q+ L G P I+ G H+ A++ G
Sbjct: 159 LFAWGQNLHGQLGV-GRKFPSTTTPQIVEHLAGVPLA------QISAGEAHSMALSMSGN 211
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST- 141
+++WG NE GQLG G E + P ++ L ++ V+ ++CG +A + + DG + T
Sbjct: 212 IYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQ----DGLLFTF 267
Query: 142 --SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYNEYGQ 198
+ G N N R A + Q++CG H +A +S+ G + ++G + GQ
Sbjct: 268 GAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQ 327
Query: 199 LGRGITCEGL 208
LG G T + L
Sbjct: 328 LGNGGTRDQL 337
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD-G 81
++ +G GQ G + +LR L EL G R IACG HT A SD G
Sbjct: 264 LFTFGAGKHGQLGHNSTQNELR--PCLVAELVG------YRVTQIACGRWHTLAYVSDLG 315
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVK 117
+F++G+ + GQLG+G + P VK SE +K
Sbjct: 316 KVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELK 351
>gi|326506178|dbj|BAJ86407.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 389
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 151/354 (42%), Gaps = 44/354 (12%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+++ WG+N G G + P + L G + + A G H AV G
Sbjct: 61 SLFTWGWNQRGTLGHPPETKTESSPAHVD-ALVGV------KIVQAAIGGWHCLAVDDKG 113
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+ WG NE+GQ G EE + + + L+ + C + T
Sbjct: 114 RAYAWGGNEYGQCG---EEPERKEDGTRALRRDIPIPQRCALKLKVRQVAAGGTHSVVLT 170
Query: 142 SR--LWVWGQNQGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECGLLQAWGYN 194
+W WGQ P TP + + ++ G+ H +ALS +L AWG N
Sbjct: 171 QEGHVWTWGQPW---PPGDIKNISTPVRVQGLEQVSMIAVGAFHNLALSVDRILWAWGNN 227
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
EYGQLG G T Q P ++G + + ++ G +HSAA+++ GEVY WG
Sbjct: 228 EYGQLGIGDTQPRSQ-PIRVEGLSNL--------SLVDIAAGGWHSAALTKEGEVYAWGR 278
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
G G+LG +S ++P +V L G I V+CGG HS LTS G ++++G G+
Sbjct: 279 GEHGRLGFGDDKS--SHMVPLQVQLLAGEDIVQVSCGGTHSVVLTSDGRIFSYGRGDHGR 336
Query: 315 LGLG-------PQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
LG G P +L P ++ T + VACG HTL +
Sbjct: 337 LGDGRKVTTGHPMEVPINLPPPKTSTSSEGL------WQANYVACGGRHTLAIV 384
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 169/388 (43%), Gaps = 63/388 (16%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+ WG GQ G G + + R + + A + G ++ A+ DG
Sbjct: 9 AVLAWGSGEDGQLGMGGCDEKDRARCICALDAYAVSA--------VVAGSRNSLAICDDG 60
Query: 82 TLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDGTI 139
+LFTWG N+ G LG E + P V L + V++ G HC A ++ G
Sbjct: 61 SLFTWGWNQRGTLGHPPETKTESSPAHVDALVGVKIVQAAIGGWHCLAV-----DDKG-- 113
Query: 140 STSRLWVWGQNQ----GSNFPRLFWGAFT-----PNTIIC-------QVSCGSVHVVALS 183
R + WG N+ G R G P C QV+ G H V L+
Sbjct: 114 ---RAYAWGGNEYGQCGEEPERKEDGTRALRRDIPIPQRCALKLKVRQVAAGGTHSVVLT 170
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ G + WG Q + + P ++G LE+++ ++ G +H+ A+
Sbjct: 171 QEGHVWTWG-----QPWPPGDIKNISTPVRVQG----------LEQVSMIAVGAFHNLAL 215
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
S + ++ WG GQLG Q + P RV L + + D+A GG HS ALT +G
Sbjct: 216 SVDRILWAWGNNEYGQLGIGDTQPRSQ---PIRVEGLSNLSLVDIAAGGWHSAALTKEGE 272
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 363
+YAWG + G+LG G +S ++P + + +L + VQ V+CG +H++V D
Sbjct: 273 VYAWGRGEHGRLGFG-DDKSSHMVPLQ-------VQLLAGEDIVQ-VSCGGTHSVVLTSD 323
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPV 391
GRI +G +G+ + + +P V
Sbjct: 324 GRIFSYGRGDHGRLGDGRKVTTGHPMEV 351
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 127/302 (42%), Gaps = 49/302 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQ--LRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAV 77
K Y WG N GQ G + ++ R ++ P C R +A G H+ +
Sbjct: 112 KGRAYAWGGNEYGQCGEEPERKEDGTRALRRDIPIPQRCALKLKVR--QVAAGGTHSVVL 169
Query: 78 ASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG 137
+G ++TWG G + P +V+ L E V I+ GA A++ R
Sbjct: 170 TQEGHVWTWGQ----PWPPGDIKNISTPVRVQGL--EQVSMIAVGAFHNLALSVDR---- 219
Query: 138 TISTSRLWVWGQNQGSNFPRLFWGAFTP-----------NTIICQVSCGSVHVVALSECG 186
LW WG N+ + +L G P N + ++ G H AL++ G
Sbjct: 220 -----ILWAWGNNE---YGQLGIGDTQPRSQPIRVEGLSNLSLVDIAAGGWHSAALTKEG 271
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ AWG E+G+LG G P ++ A E I QVSCG HS ++ +
Sbjct: 272 EVYAWGRGEHGRLGFGDDKSSHMVPLQVQLLAG--------EDIVQVSCGGTHSVVLTSD 323
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKEL-------LPRRVVALDGIFIKD-VACGGVHSCAL 298
G ++++G G G+LG + + P+ + +G++ + VACGG H+ A+
Sbjct: 324 GRIFSYGRGDHGRLGDGRKVTTGHPMEVPINLPPPKTSTSSEGLWQANYVACGGRHTLAI 383
Query: 299 TS 300
+
Sbjct: 384 VT 385
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 78/174 (44%), Gaps = 25/174 (14%)
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
V WG G GQLG D+ R + ALD + V G +S A+ G+L+ WG
Sbjct: 10 VLAWGSGEDGQLGMGGCDEKDRA---RCICALDAYAVSAVVAGSRNSLAICDDGSLFTWG 66
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLVYMRDGRI 366
+Q G LG P+T++ S P D GV++V A G H L GR
Sbjct: 67 WNQRGTLGHPPETKTES-SPAHVDALV----------GVKIVQAAIGGWHCLAVDDKGRA 115
Query: 367 HGWGYNSYGQAANE--------KSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
+ WG N YGQ E ++ P P + +VR++AAGG HS VL
Sbjct: 116 YAWGGNEYGQCGEEPERKEDGTRALRRDIPIPQRCALKLKVRQVAAGGTHSVVL 169
>gi|426378407|ref|XP_004055918.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like, partial [Gorilla gorilla gorilla]
Length = 4586
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 176/411 (42%), Gaps = 67/411 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
++ ++VWG N Q G L+ K P + N + +A G + AV
Sbjct: 2710 RTKVFVWGLNDKDQLG------GLKGSKIKVPSFSETLSALNV--VQVAGGSKSLFAVTV 2761
Query: 80 DGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPREN 135
+G ++ G G+LG G G P ++ L S VK ++ G H TA
Sbjct: 2762 EGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV----- 2816
Query: 136 DGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
DG +++ WG+ PRL T I ++CGS H AL+
Sbjct: 2817 DG-----KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSS 2869
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGP--RVIKGYAKFLDEAPELEKITQVSCG--EYHSA 241
G L WG EYG+LG G L+ +V+ G+ ++ QV+CG + +
Sbjct: 2870 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-----------RVIQVACGSRDAQTL 2918
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A+++ G V++WG G G+LG + + +P+ + L+G + + CG S ALT
Sbjct: 2919 ALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTKS 2975
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLV 359
G ++ WG +LG G SD + R ++ G ++V A G H L
Sbjct: 2976 GVVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3023
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
G+++ WG N +GQ N +T P+ V G+ + ++A G HS
Sbjct: 3024 VTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3074
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 2820 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 2871
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 2872 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 2924
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 2925 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 2981
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV+++G+VY
Sbjct: 2982 GKGDYFRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDSGQVYA 3032
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3033 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3078
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 2759 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQI-----TALSSYVVKKVAVHSGGRHATA 2813
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+
Sbjct: 2814 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------ 2867
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 2868 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 2921
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 2922 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 2972
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH S K P+ V L G I VA G +H A+T G
Sbjct: 2973 TKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDSGQ 3029
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 3030 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3076
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 144/327 (44%), Gaps = 50/327 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +D+A G H+A V + G
Sbjct: 3812 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRGIEV--VDVAAGGAHSACVTAAGD 3863
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG E + P+ V+ LQ V I+CG+ + +D T+
Sbjct: 3864 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC--LTDDDTV--- 3918
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 3919 --WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 3976
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 3977 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4027
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G + VACG H+ AW S+
Sbjct: 4028 NDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAWSTSKPAS 4075
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPIL 341
G P + +P E + + + IPI+
Sbjct: 4076 AGKLP-----AQVPMEYN-HLQEIPII 4096
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 174/411 (42%), Gaps = 76/411 (18%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P C A A R + + G + AV +DG
Sbjct: 3706 IYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALATLRPVQLIGGEQTLLAVTADG 3756
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 3757 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE------- 3809
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG+ + PR+ + V+ G H ++ G L
Sbjct: 3810 ---GEVYSWGEAEDGKLGHGNRSPCDRPRVIES--LRGIEVVDVAAGGAHSACVTAAGDL 3864
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSEN 246
WG YG+LG + + L+ P+++ EA + ++ ++C G+ + ++++
Sbjct: 3865 YTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVVDIACGSGDAQTLCLTDD 3915
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 3916 DTVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 3972
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTL 358
WG +LG G SD + R P VQ +A G H +
Sbjct: 3973 WGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCV 4014
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
DG ++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4015 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4065
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 124/253 (49%), Gaps = 30/253 (11%)
Query: 134 ENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N +GS + + QV+ GS + A++
Sbjct: 2704 ESAATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2762
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + A G G+LG GI+ + PR I + ++ K V G H+ A++
Sbjct: 2763 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYV------VKKVAVHSGGRHATALTV 2816
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS ALTS G LY
Sbjct: 2817 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELY 2873
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRD 363
WG + G+LG G T L P + + +L+ +Q VACG + TL +
Sbjct: 2874 TWGLGEYGRLGHGDNTT--QLKP-------KMVKVLLGHRVIQ-VACGSRDAQTLALTDE 2923
Query: 364 GRIHGWGYNSYGQ 376
G + WG +G+
Sbjct: 2924 GLVFSWGDGDFGK 2936
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 127/276 (46%), Gaps = 25/276 (9%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R+ N + P+L G + N + H +AL+ G + +WG + +LG G
Sbjct: 448 RVXTQAYNSDTLVPQLVQGLASRNVVKIAAHSDGHHYLALAATGEVYSWGCGDGRRLGHG 507
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P+VI ++ + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 508 DTVP-LEEPKVISAFSG----KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 562
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + E +P V L G+ + DVACG + A+T G +++WG G+LG G
Sbjct: 563 ---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 619
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D V V CG ++ +DG+++ WG +
Sbjct: 620 DGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 667
Query: 379 NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ + YP ++ G +V +AAG H L +
Sbjct: 668 HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 703
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 134/310 (43%), Gaps = 53/310 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHC 125
+ G +H A++S+G +++WG E G+LG G P ++ L+ E V + GAH
Sbjct: 3796 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 3855
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCG 175
A L+ WG+ + P+L A + ++ ++CG
Sbjct: 3856 ACVTA----------AGDLYTWGKGRYGRLGHSDSEDQLKPKLV-EALQGHRVV-DIACG 3903
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + L++ + +WG +YG+LGRG +G + P I + +V
Sbjct: 3904 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVKV 3954
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G VYTWG G +LGH S D PR+V L G + +A G +
Sbjct: 3955 ECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSL 4011
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLV 350
H T G +Y WG + GQLG G T P LV V V
Sbjct: 4012 HCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRV 4058
Query: 351 ACGHSHTLVY 360
ACG +HTL +
Sbjct: 4059 ACGSAHTLAW 4068
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 137/300 (45%), Gaps = 36/300 (12%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG + G G L PK + G AG + + IACG ++AA
Sbjct: 487 LAATGEVYSWGCGDGRRLGH-GDTVPLEEPKVIS-AFSGKQAGKHV--VHIACGSTYSAA 542
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E P V L+ V ++CG+ +A
Sbjct: 543 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA------ 596
Query: 137 GTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
++W WG R G TP I + +V CGS +AL++ G +
Sbjct: 597 -VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQV 655
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG + +LG G T E ++ P++++G + +K+ V+ G H A++E+ E
Sbjct: 656 YSWGKGDNQRLGHG-TEEHVRYPKLLEGL--------QGKKVIDVAAGSTHCLALTEDSE 706
Query: 249 VYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
V++W GS Q H +L+ E P + LD I +ACG S A +S Y W
Sbjct: 707 VHSW--GSNDQCQHFDTLRVTKPE--PAALPGLDTKHIVGIACGPAQSSAGSSX---YEW 759
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 138/340 (40%), Gaps = 63/340 (18%)
Query: 56 CPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
C AN IAC + V +G + T N + P+ V+ L S
Sbjct: 422 CKGLANLGVTQIACAEKRLLIVXRNGRVXTQAYNSDTLV----------PQLVQGLASRN 471
Query: 116 VKSISCGA--HCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAF 163
V I+ + H A+A +T ++ WG G P++ AF
Sbjct: 472 VVKIAAHSDGHHYLALA---------ATGEVYSWGCGDGRRLGHGDTVPLEEPKVI-SAF 521
Query: 164 TPNTI---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF 220
+ + ++CGS + A++ G L WG YG+LG G + E P ++ G
Sbjct: 522 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-SSEDEAIPMLVAGLKGL 580
Query: 221 LDEAPELEKITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
K+ V+CG + + AV+ENG+V++WG G G+LG D P+ +
Sbjct: 581 --------KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR---GGSDGCKTPKLIE 629
Query: 279 ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
L + + V CG S ALT G +Y+WG +LG G ++ + R
Sbjct: 630 KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG------------TEEHVRYP 677
Query: 339 PILVVPNGVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+L G ++ VA G +H L D +H WG N Q
Sbjct: 678 KLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 717
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 137/338 (40%), Gaps = 26/338 (7%)
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEP 132
T + GT++ WG N GQLG K P + L + V+ I A A+
Sbjct: 3697 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLLAVTADG 3756
Query: 133 RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
+ G + + P L V+ G H +ALS G + +WG
Sbjct: 3757 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 3816
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
E G+LG G PRVI+ ++ V+ G HSA V+ G++YTW
Sbjct: 3817 EAEDGKLGHG-NRSPCDRPRVIESLRGI--------EVVDVAAGGAHSACVTAAGDLYTW 3867
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGS 310
G G G+LGH + +L P+ V AL G + D+ACG + LT +++WG
Sbjct: 3868 GKGRYGRLGH---SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDG 3924
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWG 370
G+LG G +P + D+ + GV V CG ++ + G ++ WG
Sbjct: 3925 DYGKLGRG--GSDGCKVPMKIDS--------LTGLGVVKVECGSQFSVALTKSGAVYTWG 3974
Query: 371 YNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGH 407
Y + + + P V G +V +A G H
Sbjct: 3975 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4012
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG + G G + +R P+Q+ + + IA G H DG
Sbjct: 3969 AVYTWGKGDYHRLGH-GSDDHVRRPRQVQ-------GLQGKKVIAIATGSLHCVCCTEDG 4020
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
++TWG N+ GQLGDGT + P V LQ + V ++CG+ T A
Sbjct: 4021 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4067
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 72/186 (38%), Gaps = 22/186 (11%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+TQ++C E V NG V T S L+P+ V L + +A
Sbjct: 430 VTQIACAEKRLLIVXRNGRVXTQAYNS-------------DTLVPQLVQGLASRNVVKIA 476
Query: 290 C--GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
G H AL + G +Y+WG +LG G +P E V
Sbjct: 477 AHSDGHHYLALAATGEVYSWGCGDGRRLGHG------DTVPLEEPKVISAFSGKQAGKHV 530
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGG 406
+ACG +++ +G ++ WG +YG+ + S P V G +V +A G G
Sbjct: 531 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSG 590
Query: 407 HSAVLA 412
+ LA
Sbjct: 591 DAQTLA 596
>gi|410208768|gb|JAA01603.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Pan troglodytes]
gi|410264078|gb|JAA20005.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Pan troglodytes]
gi|410293804|gb|JAA25502.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Pan troglodytes]
gi|410338541|gb|JAA38217.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Pan troglodytes]
Length = 527
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 141/304 (46%), Gaps = 39/304 (12%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V + +F +G N LG G + P+K++ L + +KS+S G+ ++ D
Sbjct: 37 VTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLST---ED 93
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQV---SCGSVHVVALSECGL 187
G + + WG N G+ + N +I QV +CGS H +AL+ G
Sbjct: 94 GVV-----YAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGE 148
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWGYN GQ+G G T PR + ++++ ++CG+ S AV +NG
Sbjct: 149 VFAWGYNNCGQVGSGSTANQ-PTPRKVT-------NCLHIKRVVGIACGQTSSMAVLDNG 200
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
EVY WG GQLG L + +L P RV AL + + + CG H+ ALT +G LYAW
Sbjct: 201 EVYGWGYNGNGQLG---LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAW 257
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRI 366
G + GQLG G + S P + V++ AC +HT + G +
Sbjct: 258 GANTYGQLGTGNKNNLLS--PAHIMVEKERV--------VEIAACHSAHTSAAKTQGGHV 307
Query: 367 HGWG 370
+ WG
Sbjct: 308 YMWG 311
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 126/269 (46%), Gaps = 37/269 (13%)
Query: 148 GQNQGSNFPRLFWGAFTPNTIICQVSCGS-VHVVALSECGLLQAWGYNEYGQLGRGITCE 206
G NQ + P+ G I +S GS HV+ +E G++ AWG+N Y QLG G T +
Sbjct: 57 GDNQSTLVPKKLEGLCGKK--IKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQ 114
Query: 207 GLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQ 266
G+ +V ++++ +V+CG +HS A++ +GEV+ WG + GQ+G S
Sbjct: 115 GIAPVQVCTNLL--------IKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTA 166
Query: 267 SGDKELLPRRVVALDGIFIKDV---ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRS 323
+ + PR+V + + IK V ACG S A+ G +Y WG + GQLGLG
Sbjct: 167 N---QPTPRKVT--NCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ 221
Query: 324 FSLIPNESDTYFRNIPILVVPNG---VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANE 380
+ P+ V V + CG++HTL +G ++ WG N+YGQ
Sbjct: 222 LT-------------PVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268
Query: 381 KSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
SP V + R + HSA
Sbjct: 269 NKNNLL--SPAHIMVEKERVVEIAACHSA 295
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 113/243 (46%), Gaps = 37/243 (15%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG+N Q G G Q P Q+ C + +++ACG H+ A+A+DG
Sbjct: 95 VVYAWGHNGYSQLGN-GTTNQGIAPVQV------CTNLLIKQVVEVACGSHHSMALAADG 147
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+F WG N GQ+G G+ + P KV L + V I+CG + A+ + E
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGE------ 201
Query: 141 TSRLWVWGQN------QGSNFPRLFWGAFTPNTIIC--QVSCGSVHVVALSECGLLQAWG 192
++ WG N G+N +L +C Q+ CG H +AL++ GLL AWG
Sbjct: 202 ---VYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G L ++ E E++ ++ +C H SAA ++ G VY
Sbjct: 259 ANTYGQLGTGNKNNLLSPAHIM----------VEKERVVEIAACHSAHTSAAKTQGGHVY 308
Query: 251 TWG 253
WG
Sbjct: 309 MWG 311
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 140/334 (41%), Gaps = 46/334 (13%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G +A + ++V+G N+S G G + +PK+L G + L
Sbjct: 26 VFGTSASEALYVTDNDEVFVFGLNYSNCLG-TGDNQSTLVPKKLEG-----LCGKKIKSL 79
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV-KQLQSEFVKSISCGAH 124
G H DG ++ WG N + QLG+GT P +V L + V ++CG+H
Sbjct: 80 SYGSG-PHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSH 138
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQ------GSN----FPRLFWGAFTPNTIICQVSC 174
+ A+A E ++ WG N GS PR ++ ++C
Sbjct: 139 HSMALAADGE---------VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVV-GIAC 188
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G +A+ + G + WGYN GQLG G L RV A + Q+
Sbjct: 189 GQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRV---------AALHSVCVNQIV 239
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGG 292
CG H+ A+++ G +Y WG + GQLG +G+K L P ++ ++ AC
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLG-----TGNKNNLLSPAHIMVEKERVVEIAACHS 294
Query: 293 VH-SCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
H S A T G +Y WG + GQ + P FS
Sbjct: 295 AHTSAAKTQGGHVYMWGQCR-GQSVILPHLTHFS 327
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 17/173 (9%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHSCALT 299
V++N EV+ +GL LG +GD + L+P+++ L G IK ++ G G H T
Sbjct: 37 VTDNDEVFVFGLNYSNCLG-----TGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLST 91
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
G +YAWG + QLG G + + + ++ L++ V+ VACG H++
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTN--------LLIKQVVE-VACGSHHSMA 142
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
DG + WGYN+ GQ + + P V C+ R + G ++ +A
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMA 195
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 20/151 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WGYN +GQ G QL P ++ C I CG+ HT A+ +G
Sbjct: 202 VYGWGYNGNGQLGLGNNGNQLT-PVRVAALHSVCVN-------QIVCGYAHTLALTDEGL 253
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
L+ WGAN +GQLG G + P + + V+ +C AH +AA +
Sbjct: 254 LYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQG--------- 304
Query: 142 SRLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 305 GHVYMWGQCRGQSVILPHLTHFSCTDDVFAC 335
>gi|408500679|ref|YP_006864598.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465503|gb|AFU71032.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1226
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 163/414 (39%), Gaps = 80/414 (19%)
Query: 24 YVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANS--RWLDIACGHEHTAAVASDG 81
Y WGYN GQ G + P + PAG + ++ +A G H+ A+ SDG
Sbjct: 739 YAWGYNGFGQIGDGTTANRTM------PVMVKKPAGVPTDFTYVQVAAGGYHSLAIGSDG 792
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVK----SISCGAHCTAAIAEPRENDG 137
+ WG N+FGQLG+ T P +V +S G + A+ DG
Sbjct: 793 YTYAWGNNDFGQLGNNTTANSSVPVRVHSPNGSGTGLKAIQVSTGMRSSMALGA----DG 848
Query: 138 TISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQV------SCGSVHV----------VA 181
T+ + WG N G +T + + G H +A
Sbjct: 849 TV-----YTWGSLSAGN------GQYTSQQTVPAAVMDPADASGVFHALQIGTQWSFNLA 897
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQ------GPRVIKGYAKFLDEAPELEKITQVSC 235
+ + + AWGYN YGQLG T +GL P+ + ++ A K T+VS
Sbjct: 898 IGQDHYVYAWGYNNYGQLGNN-TSDGLNTNTAHPTPKRVFSSSQSTAAAGPWLKATKVSA 956
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV---VALDGIFIKDVACGG 292
G +H+ A+ E+G + WG GQLG+ S D +P++V + ++ G
Sbjct: 957 GGWHALAIDEDGNTWAWGRNIAGQLGNGSNSGDDPNPIPQKVRYPTDAGTVTAIQISGGD 1016
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG------ 346
H+ A+ + G +AWG S Q+G ++ Y R P+ V +
Sbjct: 1017 SHTLAIDTNGNAWAWGISNYNQIG-------------DNAGYNRYSPVRVFASAQSTSSA 1063
Query: 347 -----VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 395
V V+ G+ H+ DG WG N YG N A PSP V
Sbjct: 1064 GPWLKVAQVSAGYFHSSAIDTDGYARAWGDNRYGAIGNPD---AGSPSPAPMPV 1114
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 133/331 (40%), Gaps = 53/331 (16%)
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQ---LQSEFVK-SISCGAHCTAAIAE 131
AV SDG + WG N FGQ+GDGT R P VK+ + ++F ++ G + + AI
Sbjct: 731 AVGSDGNAYAWGYNGFGQIGDGTTANRTMPVMVKKPAGVPTDFTYVQVAAGGYHSLAIG- 789
Query: 132 PRENDGTISTSRLWVWGQNQ----------GSNFPRLFWGAFTPN-----TIICQVSCGS 176
S + WG N S+ P +PN QVS G
Sbjct: 790 --------SDGYTYAWGNNDFGQLGNNTTANSSVPVRV---HSPNGSGTGLKAIQVSTGM 838
Query: 177 VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG 236
+AL G + WG G G P + A +A + Q+
Sbjct: 839 RSSMALGADGTVYTWGSLS---AGNGQYTSQQTVPAAVMDPA----DASGVFHALQIGTQ 891
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCS---LQSGDKELLPRRV------VALDGIFIK- 286
+ A+ ++ VY WG + GQLG+ + L + P+RV A G ++K
Sbjct: 892 WSFNLAIGQDHYVYAWGYNNYGQLGNNTSDGLNTNTAHPTPKRVFSSSQSTAAAGPWLKA 951
Query: 287 -DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
V+ GG H+ A+ G +AWG + AGQLG G + PN R
Sbjct: 952 TKVSAGGWHALAIDEDGNTWAWGRNIAGQLGNGSNSGD---DPNPIPQKVRYPTDAGTVT 1008
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+Q ++ G SHTL +G WG ++Y Q
Sbjct: 1009 AIQ-ISGGDSHTLAIDTNGNAWAWGISNYNQ 1038
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 95/221 (42%), Gaps = 28/221 (12%)
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
+A+ G AWGYN +GQ+G G T R + K P QV+ G YH
Sbjct: 730 LAVGSDGNAYAWGYNGFGQIGDGTTAN-----RTMPVMVKKPAGVPTDFTYVQVAAGGYH 784
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD----GIFIKDVACGGVHS 295
S A+ +G Y WG GQLG+ + + +P RV + + G+ V+ G S
Sbjct: 785 SLAIGSDGYTYAWGNNDFGQLGNNTTANSS---VPVRVHSPNGSGTGLKAIQVSTGMRSS 841
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLI--PNESDTYFRNIPILVVPNGVQLVACG 353
AL + G +Y WG AG Q + + P ++ F + I G Q
Sbjct: 842 MALGADGTVYTWGSLSAGNGQYTSQQTVPAAVMDPADASGVFHALQI-----GTQW---- 892
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQAANEKS----TYAWYPSP 390
S L +D ++ WGYN+YGQ N S T +P+P
Sbjct: 893 -SFNLAIGQDHYVYAWGYNNYGQLGNNTSDGLNTNTAHPTP 932
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 93/261 (35%), Gaps = 60/261 (22%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGC--PAGANSRWL---DIACGHEHTAA 76
+Y WGYN+ GQ G + P +F A WL ++ G H A
Sbjct: 904 VYAWGYNNYGQLGNNTSDGLNTNTAHPTPKRVFSSSQSTAAAGPWLKATKVSAGGWHALA 963
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKH---PEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
+ DG + WG N GQLG+G+ G P+KV+ + T A
Sbjct: 964 IDEDGNTWAWGRNIAGQLGNGSNSGDDPNPIPQKVR--------------YPTDA----- 1004
Query: 134 ENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
GT++ Q+S G H +A+ G AWG
Sbjct: 1005 ---GTVT----------------------------AIQISGGDSHTLAIDTNGNAWAWGI 1033
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
+ Y Q+G RV P L K+ QVS G +HS+A+ +G WG
Sbjct: 1034 SNYNQIGDNAGYNRYSPVRVFASAQSTSSAGPWL-KVAQVSAGYFHSSAIDTDGYARAWG 1092
Query: 254 LGSVGQLGHCSLQSGDKELLP 274
G +G+ S +P
Sbjct: 1093 DNRYGAIGNPDAGSPSPAPMP 1113
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 77/179 (43%), Gaps = 26/179 (14%)
Query: 229 KITQVSCGEY-------HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV--VA 279
+ Q+S G Y S AV +G Y WG GQ+G + + ++ ++ V
Sbjct: 711 RFNQISAGGYVMNDLMGFSLAVGSDGNAYAWGYNGFGQIGDGTTANRTMPVMVKKPAGVP 770
Query: 280 LDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLI----PNESDTYF 335
D +++ VA GG HS A+ S G YAWG + GQLG S + PN S T
Sbjct: 771 TDFTYVQ-VAAGGYHSLAIGSDGYTYAWGNNDFGQLGNNTTANSSVPVRVHSPNGSGTGL 829
Query: 336 RNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY--GQAANEKSTYAWYPSPVD 392
+ I V+ G ++ DG ++ WG S GQ ++++ A P D
Sbjct: 830 KAI----------QVSTGMRSSMALGADGTVYTWGSLSAGNGQYTSQQTVPAAVMDPAD 878
>gi|326913714|ref|XP_003203179.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Meleagris
gallopavo]
Length = 4815
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 134/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
I+ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3048 IFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAAITSSGE 3099
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 3100 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 3152
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 3153 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3209
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV++ G+VY
Sbjct: 3210 GKGDYFRLGHGTDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDTGQVYA 3260
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3261 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3306
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 145/327 (44%), Gaps = 50/327 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +DIA G H+A + + G
Sbjct: 4041 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRGIEV--VDIAAGGAHSACITAAGD 4092
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFTWG +G+LG G E + P+ V+ LQ V I+CG+ + +D T+
Sbjct: 4093 LFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLC--LTDDDTV--- 4147
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 4148 --WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4205
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 4206 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4256
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G I VACG H+ AW S+
Sbjct: 4257 NDEGQLGDGTTNAIQR---PRLVAALQGKKINRVACGSAHT---------LAWSTSKPAN 4304
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPIL 341
G P + +P E + + + IPI+
Sbjct: 4305 AGKLP-----TQVPMEYN-HLQEIPII 4325
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 2987 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQI-----TALSNYVVKKVAVHSGGRHAMA 3041
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AAI
Sbjct: 3042 LTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT------ 3095
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 3096 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3149
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 3150 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 3200
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH + K P+ V L G I VA G +H A+T G
Sbjct: 3201 TKSGVVWTWGKGDYFRLGHGTDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDTGQ 3257
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 3258 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3304
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 174/412 (42%), Gaps = 76/412 (18%)
Query: 22 AIYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
IY WG+NH GQ G G E ++++P C A A R + + G + AV +D
Sbjct: 3934 TIYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALATLRPVQLIGGEQTLFAVTAD 3984
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDG 137
G L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 3985 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE------ 4038
Query: 138 TISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
++ WG+ + PR+ + ++ G H ++ G
Sbjct: 4039 ----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDIAAGGAHSACITAAGD 4092
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSE 245
L WG YG+LG G + + L+ P++++ + ++ ++C G+ + +++
Sbjct: 4093 LFTWGKGRYGRLGHGDSEDQLK-PKLVEALQGY--------RVIDIACGSGDAQTLCLTD 4143
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+ V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4144 DDTVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVY 4200
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHT 357
WG +LG G SD + R P VQ +A G H
Sbjct: 4201 TWGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHC 4242
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
+ DG ++ WG N GQ + + P V G ++ ++A G H+
Sbjct: 4243 VCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 4294
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 166/393 (42%), Gaps = 69/393 (17%)
Query: 68 ACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTA 127
A G E A + + +F WG N+ QLG K P + L + V ++ G+
Sbjct: 2928 AAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLF 2985
Query: 128 AIAEPREND--GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
A+ + G + RL + + PR V G H +AL+
Sbjct: 2986 AVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVD 3045
Query: 186 GLLQAWGYNEYGQLGR--GITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
G + +WG + G+LG + C+ PR+I EA + ++I ++CG HSAA+
Sbjct: 3046 GKIFSWGEGDDGKLGHFSRMNCDK---PRLI--------EALKTKRIRDIACGSSHSAAI 3094
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHSCALT 299
+ +GE+YTWGLG G+LGH GD +L P+ V L G + VACG + ALT
Sbjct: 3095 TSSGELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3149
Query: 300 SKGALYAWGGSQAGQLGLG-------PQT---------------RSFSLIPNES------ 331
+G +++WG G+LG G PQ FSL +S
Sbjct: 3150 DEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3209
Query: 332 ------------DTYFRNIPILVVPNGVQLV--ACGHSHTLVYMRDGRIHGWGYNSYGQA 377
D + R ++ G ++V A G H L G+++ WG N +GQ
Sbjct: 3210 GKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQ 3269
Query: 378 ANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
N +T P+ V G+ + ++A G HS
Sbjct: 3270 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3302
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 135/285 (47%), Gaps = 45/285 (15%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+L A N + H A++++G +F+WG + G+LG G + P+ +
Sbjct: 459 LGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLI 518
Query: 109 KQLQ----SEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT 164
L + V I+CG+ +AAI E L+ WG+ N+ RL G+
Sbjct: 519 SALSGKQAGKHVVHIACGSTYSAAITAEGE---------LYTWGRG---NYGRLGHGSSE 566
Query: 165 PNTI-----------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
TI + VSCGS +A++E G + +WG +YG+LGRG +G + P
Sbjct: 567 DQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTP 625
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
++I+ I +V CG S A++++G+VYTWG G +LGH G +E
Sbjct: 626 KLIEKLQDL--------DIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGH-----GTEE 672
Query: 272 LL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ P+ + L G + DVA G H ALT +++WG + Q
Sbjct: 673 HVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 717
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 135/310 (43%), Gaps = 53/310 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ G +H A++S+G +++WG E G+LG G P ++ L+ V I+ G +
Sbjct: 4025 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHS 4084
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCG 175
A I + L+ WG+ + + RL G P + + ++CG
Sbjct: 4085 ACIT---------AAGDLFTWGKGR---YGRLGHGDSEDQLKPKLVEALQGYRVIDIACG 4132
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + L++ + +WG +YG+LGRG +G + P I + +V
Sbjct: 4133 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVKV 4183
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G VYTWG G +LGH S D PR+V L G + +A G +
Sbjct: 4184 ECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSL 4240
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLV 350
H T G +Y WG + GQLG G T P LV + V
Sbjct: 4241 HCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKINRV 4287
Query: 351 ACGHSHTLVY 360
ACG +HTL +
Sbjct: 4288 ACGSAHTLAW 4297
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 127/276 (46%), Gaps = 25/276 (9%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N + P+L + N + H +ALS G + +WG + G+LG G
Sbjct: 448 RVYTQAYNSDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHG 507
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P++I L + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 508 DTVP-LEEPKLISA----LSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 562
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + + +P V L G+ + DV+CG + A+T G +++WG G+LG G
Sbjct: 563 ---GSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 619
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D + V CG ++ +DG+++ WG +
Sbjct: 620 DGCKTPKLIEKLQDL------------DIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLG 667
Query: 379 NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ + YP ++ G +V +AAG H L +
Sbjct: 668 HGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTE 703
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 136/293 (46%), Gaps = 33/293 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++ WG G+ G G L PK L L G AG + + IACG ++AA
Sbjct: 487 LSANGEVFSWGCGDGGRLGH-GDTVPLEEPK-LISALSGKQAGKHV--VHIACGSTYSAA 542
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E + P V L+ V +SCG+ +A
Sbjct: 543 ITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLA------ 596
Query: 137 GTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
++W WG R G TP I I +V CGS +AL++ G +
Sbjct: 597 -VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQV 655
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG + +LG G T E ++ P++++G +K+ V+ G H A++E+ E
Sbjct: 656 YTWGKGDNQRLGHG-TEEHVRYPKLLEGLKG--------KKVIDVAAGSTHCLALTEDSE 706
Query: 249 VYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
V++W GS Q H +L+ E P + LD I +ACG S A +S
Sbjct: 707 VHSW--GSNDQCQHFDTLRITKPE--PAALPGLDTKHIVGIACGPAQSFAWSS 755
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 102/219 (46%), Gaps = 46/219 (21%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ Q++C + LS G + YN GP++++ A + +
Sbjct: 430 VVQIACAEKRFLILSRNGRVYTQAYNS-----------DTLGPQLVQSLA-----SRNIV 473
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI--- 283
KI S G +H A+S NGEV++WG G G+LGH GD L P+ + AL G
Sbjct: 474 KIAAHSDG-HHYLALSANGEVFSWGCGDGGRLGH-----GDTVPLEEPKLISALSGKQAG 527
Query: 284 -FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
+ +ACG +S A+T++G LY WG G+LG G + + IP+LV
Sbjct: 528 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-------------SSEDQTIPMLV 574
Query: 343 V-PNGVQL--VAC--GHSHTLVYMRDGRIHGWGYNSYGQ 376
G+++ V+C G + TL +G++ WG YG+
Sbjct: 575 TGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 613
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 107/278 (38%), Gaps = 63/278 (22%)
Query: 186 GLLQAWGYNEYGQLGRGI---------TCEGLQGPRVIK--------------------G 216
G + WG+N GQLG GI CE L R ++ G
Sbjct: 3933 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3991
Query: 217 Y----------AKFLDEAPELEKITQ-------VSCGEYHSAAVSENGEVYTWGLGSVGQ 259
Y + + LE I V+ G H A+S GEVY+WG G+
Sbjct: 3992 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4051
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LGH + D+ PR + +L GI + D+A GG HS +T+ G L+ WG + G+LG G
Sbjct: 4052 LGHGNRSPCDR---PRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGD 4108
Query: 320 QTRSFSLIPNESDTYFRNIPILVVPNGVQLVAC--GHSHTLVYMRDGRIHGWGYNSYGQA 377
E+ +R I I AC G + TL D + WG YG+
Sbjct: 4109 SEDQLKPKLVEALQGYRVIDI----------ACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4158
Query: 378 ANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADA 414
S P +D G V K+ G S L +
Sbjct: 4159 GRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4196
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 94/243 (38%), Gaps = 35/243 (14%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
Q S + H +L E G+ Y + I CEGL V+
Sbjct: 388 QCSSPTSHKGSLQEVIAWGLIGWKYYANVSGPIQCEGLASLGVV---------------- 431
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
Q++C E +S NG VYT S LG +QS L R +V +
Sbjct: 432 -QIACAEKRFLILSRNGRVYTQAYNS-DTLGPQLVQS----LASRNIVKIAA------HS 479
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
G H AL++ G +++WG G+LG G +P E + V +
Sbjct: 480 DGHHYLALSANGEVFSWGCGDGGRLGHG------DTVPLEEPKLISALSGKQAGKHVVHI 533
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSA 409
ACG +++ +G ++ WG +YG+ + S P V G +V ++ G G +
Sbjct: 534 ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQ 593
Query: 410 VLA 412
LA
Sbjct: 594 TLA 596
>gi|356991167|ref|NP_001239305.1| E3 ubiquitin-protein ligase HERC2 [Gallus gallus]
Length = 4839
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 134/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
I+ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3072 IFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAAITSSGE 3123
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 3124 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 3176
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 3177 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3233
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV++ G+VY
Sbjct: 3234 GKGDYFRLGHGTDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDTGQVYA 3284
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3285 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3330
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 145/327 (44%), Gaps = 50/327 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +DIA G H+A + + G
Sbjct: 4065 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRGIEV--VDIAAGGAHSACITAAGD 4116
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFTWG +G+LG G E + P+ V+ LQ V I+CG+ + +D T+
Sbjct: 4117 LFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLC--LTDDDTV--- 4171
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 4172 --WSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKG 4229
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 4230 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4280
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G I VACG H+ AW S+
Sbjct: 4281 NDEGQLGDGTTNAIQR---PRLVAALQGKKINRVACGSAHT---------LAWSTSKPAN 4328
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPIL 341
G P + +P E + + + IPI+
Sbjct: 4329 AGKLP-----TQVPMEYN-HLQEIPII 4349
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 3011 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQI-----TALSNYVVKKVAVHSGGRHAMA 3065
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AAI
Sbjct: 3066 LTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT------ 3119
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 3120 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3173
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 3174 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 3224
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH + K P+ V L G I VA G +H A+T G
Sbjct: 3225 TKSGVVWTWGKGDYFRLGHGTDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDTGQ 3281
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 3282 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3328
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 166/393 (42%), Gaps = 69/393 (17%)
Query: 68 ACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTA 127
A G E A + + +F WG N+ QLG K P + L + V ++ G+
Sbjct: 2952 AAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLF 3009
Query: 128 AIAEPREND--GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
A+ + G + RL + + PR V G H +AL+
Sbjct: 3010 AVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVD 3069
Query: 186 GLLQAWGYNEYGQLGR--GITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
G + +WG + G+LG + C+ PR+I EA + ++I ++CG HSAA+
Sbjct: 3070 GKIFSWGEGDDGKLGHFSRMNCDK---PRLI--------EALKTKRIRDIACGSSHSAAI 3118
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHSCALT 299
+ +GE+YTWGLG G+LGH GD +L P+ V L G + VACG + ALT
Sbjct: 3119 TSSGELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3173
Query: 300 SKGALYAWGGSQAGQLGLG-------PQT---------------RSFSLIPNES------ 331
+G +++WG G+LG G PQ FSL +S
Sbjct: 3174 DEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3233
Query: 332 ------------DTYFRNIPILVVPNGVQLV--ACGHSHTLVYMRDGRIHGWGYNSYGQA 377
D + R ++ G ++V A G H L G+++ WG N +GQ
Sbjct: 3234 GKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQ 3293
Query: 378 ANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
N +T P+ V G+ + ++A G HS
Sbjct: 3294 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3326
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 135/285 (47%), Gaps = 45/285 (15%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+L A N + H A++++G +F+WG + G+LG G + P+ +
Sbjct: 483 LGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLI 542
Query: 109 KQLQ----SEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT 164
L + V I+CG+ +AAI E L+ WG+ N+ RL G+
Sbjct: 543 SALSGKQAGKHVVHIACGSTYSAAITAEGE---------LYTWGRG---NYGRLGHGSSE 590
Query: 165 PNTI-----------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
TI + VSCGS +A++E G + +WG +YG+LGRG +G + P
Sbjct: 591 DQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTP 649
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
++I+ I +V CG S A++++G+VYTWG G +LGH G +E
Sbjct: 650 KLIEKLQDL--------DIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGH-----GTEE 696
Query: 272 LL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ P+ + L G + DVA G H ALT +++WG + Q
Sbjct: 697 HVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 173/412 (41%), Gaps = 76/412 (18%)
Query: 22 AIYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
IY WG+NH GQ G G E ++++P C A A R + + G + AV +D
Sbjct: 3958 TIYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALATLRPVQLIGGEQTLFAVTAD 4008
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDG 137
G L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 4009 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE------ 4062
Query: 138 TISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
++ WG+ + PR+ + ++ G H ++ G
Sbjct: 4063 ----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDIAAGGAHSACITAAGD 4116
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSE 245
L WG YG+LG G + + L+ P++++ + ++ ++C G+ + +++
Sbjct: 4117 LFTWGKGRYGRLGHGDSEDQLK-PKLVEALQGY--------RVIDIACGSGDAQTLCLTD 4167
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+ V++WG G G+LG D +P ++ +L + + V CG S ALT GA+Y
Sbjct: 4168 DDTVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVY 4224
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHT 357
WG +LG G SD + R P VQ +A G H
Sbjct: 4225 TWGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHC 4266
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
+ DG ++ WG N GQ + + P V G ++ ++A G H+
Sbjct: 4267 VCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 4318
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 135/310 (43%), Gaps = 53/310 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ G +H A++S+G +++WG E G+LG G P ++ L+ V I+ G +
Sbjct: 4049 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHS 4108
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCG 175
A I + L+ WG+ + + RL G P + + ++CG
Sbjct: 4109 ACIT---------AAGDLFTWGKGR---YGRLGHGDSEDQLKPKLVEALQGYRVIDIACG 4156
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + L++ + +WG +YG+LGRG +G + P I + +V
Sbjct: 4157 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTDL--------GVVKV 4207
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G VYTWG G +LGH S D PR+V L G + +A G +
Sbjct: 4208 ECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSL 4264
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLV 350
H T G +Y WG + GQLG G T P LV + V
Sbjct: 4265 HCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKINRV 4311
Query: 351 ACGHSHTLVY 360
ACG +HTL +
Sbjct: 4312 ACGSAHTLAW 4321
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 127/276 (46%), Gaps = 25/276 (9%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N + P+L + N + H +ALS G + +WG + G+LG G
Sbjct: 472 RVYTQAYNSDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHG 531
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P++I L + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 532 DTVP-LEEPKLISA----LSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 586
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + + +P V L G+ + DV+CG + A+T G +++WG G+LG G
Sbjct: 587 ---GSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 643
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D + V CG ++ +DG+++ WG +
Sbjct: 644 DGCKTPKLIEKLQDL------------DIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLG 691
Query: 379 NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ + YP ++ G +V +AAG H L +
Sbjct: 692 HGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTE 727
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 136/293 (46%), Gaps = 33/293 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++ WG G+ G G L PK L L G AG + + IACG ++AA
Sbjct: 511 LSANGEVFSWGCGDGGRLGH-GDTVPLEEPK-LISALSGKQAGKHV--VHIACGSTYSAA 566
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E + P V L+ V +SCG+ +A
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLA------ 620
Query: 137 GTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
++W WG R G TP I I +V CGS +AL++ G +
Sbjct: 621 -VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQV 679
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG + +LG G T E ++ P++++G +K+ V+ G H A++E+ E
Sbjct: 680 YTWGKGDNQRLGHG-TEEHVRYPKLLEGLKG--------KKVIDVAAGSTHCLALTEDSE 730
Query: 249 VYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
V++W GS Q H +L+ E P + LD I +ACG S A +S
Sbjct: 731 VHSW--GSNDQCQHFDTLRITKPE--PAALPGLDTKHIVGIACGPAQSFAWSS 779
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 103/222 (46%), Gaps = 46/222 (20%)
Query: 166 NTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAP 225
N + Q++C + LS G + YN GP++++ A +
Sbjct: 451 NLGVVQIACAEKRFLILSRNGRVYTQAYNS-----------DTLGPQLVQSLA-----SR 494
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI 283
+ KI S G +H A+S NGEV++WG G G+LGH GD L P+ + AL G
Sbjct: 495 NIVKIAAHSDG-HHYLALSANGEVFSWGCGDGGRLGH-----GDTVPLEEPKLISALSGK 548
Query: 284 ----FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIP 339
+ +ACG +S A+T++G LY WG G+LG G + + IP
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-------------SSEDQTIP 595
Query: 340 ILVV-PNGVQL--VAC--GHSHTLVYMRDGRIHGWGYNSYGQ 376
+LV G+++ V+C G + TL +G++ WG YG+
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 637
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 99/255 (38%), Gaps = 62/255 (24%)
Query: 186 GLLQAWGYNEYGQLGRGI---------TCEGLQGPRVIK--------------------G 216
G + WG+N GQLG GI CE L R ++ G
Sbjct: 3957 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4015
Query: 217 Y----------AKFLDEAPELEKITQ-------VSCGEYHSAAVSENGEVYTWGLGSVGQ 259
Y + + LE I V+ G H A+S GEVY+WG G+
Sbjct: 4016 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4075
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LGH + D+ PR + +L GI + D+A GG HS +T+ G L+ WG + G+LG G
Sbjct: 4076 LGHGNRSPCDR---PRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGD 4132
Query: 320 QTRSFSLIPNESDTYFRNIPILVVPNGVQLVAC--GHSHTLVYMRDGRIHGWGYNSYGQA 377
E+ +R I I AC G + TL D + WG YG+
Sbjct: 4133 SEDQLKPKLVEALQGYRVIDI----------ACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4182
Query: 378 ANEKSTYAWYPSPVD 392
S P +D
Sbjct: 4183 GRGGSDGCKVPMKID 4197
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 94/243 (38%), Gaps = 35/243 (14%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
Q S + H +L E G+ Y + I CEGL V+
Sbjct: 412 QCSSPTSHKGSLQEVIAWGLIGWKYYANVSGPIQCEGLANLGVV---------------- 455
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
Q++C E +S NG VYT S LG +QS L R +V +
Sbjct: 456 -QIACAEKRFLILSRNGRVYTQAYNS-DTLGPQLVQS----LASRNIVKIAA------HS 503
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
G H AL++ G +++WG G+LG G +P E + V +
Sbjct: 504 DGHHYLALSANGEVFSWGCGDGGRLGHG------DTVPLEEPKLISALSGKQAGKHVVHI 557
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSA 409
ACG +++ +G ++ WG +YG+ + S P V G +V ++ G G +
Sbjct: 558 ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQ 617
Query: 410 VLA 412
LA
Sbjct: 618 TLA 620
>gi|426236339|ref|XP_004012127.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Ovis aries]
Length = 531
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 125/464 (26%), Positives = 185/464 (39%), Gaps = 105/464 (22%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G +A + ++V+G N+S G G + +PK+L G + L
Sbjct: 26 VFGTSANEALYVTDSDEVFVFGLNYSNCLG-TGDNQSTLVPKKLDA-----LCGKKIKSL 79
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
G H DG ++ WG N + QLG+GT P +V C
Sbjct: 80 SYGSG-PHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQV----------------C 122
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
T + + + +V+CGS H +AL+
Sbjct: 123 TNLLIKQ------------------------------------VVEVACGSHHSMALAAD 146
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + AWGYN GQ+G G T PR + ++++ ++CG+ S AV +
Sbjct: 147 GEVFAWGYNNCGQVGSGSTANQ-PTPRKVT-------NCLHIKRVVGIACGQTSSMAVLD 198
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
NGEVY WG GQLG L + +L P RV AL + + + CG H+ ALT +G LY
Sbjct: 199 NGEVYGWGYNGNGQLG---LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLY 255
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV-QLVACGHSHT-LVYMRD 363
AWG + GQLG G + S P I+V V ++ AC +HT +
Sbjct: 256 AWGANTYGQLGTGNKNNLLS--PAH---------IMVEKERVIEIAACHSAHTSAAKTQG 304
Query: 364 GRIHGWGYNSYGQA---------ANEKSTYAWYPSP-VDWCVGEVRKLAAGGGHSAVLAD 413
G ++ WG GQ+ ++ +A + +P V W R L+A H L
Sbjct: 305 GHVYMWG-QCRGQSVTLPHLTHFSSTDDVFACFATPAVTW-----RLLSA--EHEDFLTV 356
Query: 414 ACSLKELCEFRLAESVTLSNASEIEDVASRTGSEALARLCERLR 457
A SLK+ EF E+ L I+ L CE R
Sbjct: 357 AESLKK--EFDSPETADLK--FRIDGKYIHVHKAVLKIRCEHFR 396
>gi|410960762|ref|XP_003986956.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 1 [Felis
catus]
Length = 4837
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 176/411 (42%), Gaps = 67/411 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
++ ++VWG N Q G L+ K P + N + +A G + AV
Sbjct: 2959 RTKVFVWGLNDKDQLG------GLKGSKIKVPSFSETLSALNV--VQVAGGSKSLFAVTV 3010
Query: 80 DGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPREN 135
+G ++ G G+LG G G P ++ L S VK ++ G H TA
Sbjct: 3011 EGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV----- 3065
Query: 136 DGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
DG +++ WG+ PRL T I ++CGS H AL+
Sbjct: 3066 DG-----KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSS 3118
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGP--RVIKGYAKFLDEAPELEKITQVSCG--EYHSA 241
G L WG EYG+LG G L+ +V+ G+ ++ QV+CG + +
Sbjct: 3119 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-----------RVIQVACGSRDAQTL 3167
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A+++ G V++WG G G+LG + + +P+ + L+G + + CG S ALT
Sbjct: 3168 ALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTKS 3224
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLV 359
G ++ WG +LG G SD + R ++ G ++V A G H L
Sbjct: 3225 GVVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3272
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
G+++ WG N +GQ N +T P+ V G+ + ++A G HS
Sbjct: 3273 VTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3323
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 134/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3069 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 3120
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 3121 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 3173
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 3174 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3230
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV++ G+VY
Sbjct: 3231 GKGDYFRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDAGQVYA 3281
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3282 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3327
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 3008 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQI-----TALSSYVVKKVAVHSGGRHATA 3062
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+
Sbjct: 3063 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------ 3116
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 3117 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3170
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 3171 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 3221
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH S K P+ V L G I VA G +H A+T G
Sbjct: 3222 TKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDAGQ 3278
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 3279 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3325
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 144/327 (44%), Gaps = 50/327 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +D+A G H+A V + G
Sbjct: 4063 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRGIEV--VDVAAGGAHSACVTAAGD 4114
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG E + P+ V+ LQ V ++CG+ + +D T+
Sbjct: 4115 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLC--LTDDDTV--- 4169
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 4170 --WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4227
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 4228 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4278
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G + VACG H+ AW S+
Sbjct: 4279 NDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAWSTSKPAS 4326
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPIL 341
G P + +P E + + + IPI+
Sbjct: 4327 AGKLP-----AQVPMEYN-HLQEIPII 4347
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 129/276 (46%), Gaps = 25/276 (9%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N + P+L G + N + H +AL+ G + +WG + G+LG G
Sbjct: 472 RVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG 531
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P+VI ++ + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 532 DTVP-LEEPKVISAFSG----KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 586
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + E +P V L G+ + DVACG + A+T G +++WG G+LG G
Sbjct: 587 ---GSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 643
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D V V CG ++ +DG+++ WG +
Sbjct: 644 DGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 691
Query: 379 NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ + YP ++ G +V +AAG H L +
Sbjct: 692 HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 173/411 (42%), Gaps = 76/411 (18%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P C A A R + + G + AV +DG
Sbjct: 3957 IYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALATLRPVQLIGGEQTLFAVTADG 4007
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 4008 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE------- 4060
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG+ + PR+ + V+ G H ++ G L
Sbjct: 4061 ---GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAGDL 4115
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSEN 246
WG YG+LG + + L+ P+++ EA + + V+C G+ + ++++
Sbjct: 4116 YTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHHVVDVACGSGDAQTLCLTDD 4166
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4167 DTVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 4223
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTL 358
WG +LG G SD + R P VQ +A G H +
Sbjct: 4224 WGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCV 4265
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
DG ++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4266 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4316
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 122/253 (48%), Gaps = 30/253 (11%)
Query: 134 ENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N +GS + + QV+ GS + A++
Sbjct: 2953 ESAATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + A G G+LG GI+ + PR I + ++ K V G H+ A++
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYV------VKKVAVHSGGRHATALTV 3065
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS ALTS G LY
Sbjct: 3066 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELY 3122
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRD 363
WG + G+LG G T + + +L+ +Q VACG + TL +
Sbjct: 3123 TWGLGEYGRLGHGDNTTQLKP---------KMVKVLLGHRVIQ-VACGSRDAQTLALTDE 3172
Query: 364 GRIHGWGYNSYGQ 376
G + WG +G+
Sbjct: 3173 GLVFSWGDGDFGK 3185
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 133/311 (42%), Gaps = 55/311 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHC 125
+ G +H A++S+G +++WG E G+LG G P ++ L+ E V + GAH
Sbjct: 4047 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4106
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSC 174
A L+ WG+ + + RL P + + V+C
Sbjct: 4107 ACVTA----------AGDLYTWGKGR---YGRLGHSDSEDQLKPKLVEALQGHHVVDVAC 4153
Query: 175 GS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
GS + L++ + +WG +YG+LGRG +G + P I + +
Sbjct: 4154 GSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVK 4204
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
V CG S A++++G VYTWG G +LGH S D PR+V L G + +A G
Sbjct: 4205 VECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGS 4261
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQL 349
+H T G +Y WG + GQLG G T P LV V
Sbjct: 4262 LHCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNR 4308
Query: 350 VACGHSHTLVY 360
VACG +HTL +
Sbjct: 4309 VACGSAHTLAW 4319
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 45/285 (15%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+L A N + H A+A+ G +++WG + G+LG G + P+ +
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVI 542
Query: 109 KQLQ----SEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT 164
+ V I+CG+ +AAI E L+ WG+ N+ RL G+
Sbjct: 543 SAFSGKQAGKHVVHIACGSTYSAAITAEGE---------LYTWGRG---NYGRLGHGSSE 590
Query: 165 PNTI-----------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
I + V+CGS +A++E G + +WG +YG+LGRG +G + P
Sbjct: 591 DEAIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTP 649
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
++I+ + +V CG S A++++G+VY+WG G +LGH G +E
Sbjct: 650 KLIEKLQDL--------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH-----GTEE 696
Query: 272 LL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ P+ + L G + DVA G H ALT +++WG + Q
Sbjct: 697 HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 136/293 (46%), Gaps = 33/293 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG G+ G G L PK + G AG + + IACG ++AA
Sbjct: 511 LAATGEVYSWGCGDGGRLGH-GDTVPLEEPKVIS-AFSGKQAGKHV--VHIACGSTYSAA 566
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E P V L+ V ++CG+ +A
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTLA------ 620
Query: 137 GTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
++W WG R G TP I + +V CGS +AL++ G +
Sbjct: 621 -VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQV 679
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG + +LG G T E ++ P++++G + +K+ V+ G H A++E+ E
Sbjct: 680 YSWGKGDNQRLGHG-TEEHVRYPKLLEGL--------QGKKVIDVAAGSTHCLALTEDSE 730
Query: 249 VYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
V++W GS Q H +L+ E P + LD I +ACG S A +S
Sbjct: 731 VHSW--GSNDQCQHFDTLRVTKPE--PAALPGLDTKHIVGIACGPAQSFAWSS 779
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 139/340 (40%), Gaps = 63/340 (18%)
Query: 56 CPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
C AN IAC + ++ +G ++T N P+ V+ L S
Sbjct: 446 CEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRN 495
Query: 116 VKSISCGA--HCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAF 163
+ I+ + H A+A +T ++ WG G P++ AF
Sbjct: 496 IVKIAAHSDGHHYLALA---------ATGEVYSWGCGDGGRLGHGDTVPLEEPKVI-SAF 545
Query: 164 TPNTI---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF 220
+ + ++CGS + A++ G L WG YG+LG G + E P ++ G
Sbjct: 546 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-SSEDEAIPVLVAGLKGL 604
Query: 221 LDEAPELEKITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
K+ V+CG + + AV+ENG+V++WG G G+LG D P+ +
Sbjct: 605 --------KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR---GGSDGCKTPKLIE 653
Query: 279 ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
L + + V CG S ALT G +Y+WG +LG G ++ + R
Sbjct: 654 KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG------------TEEHVRYP 701
Query: 339 PILVVPNGVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+L G ++ VA G +H L D +H WG N Q
Sbjct: 702 KLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 110/281 (39%), Gaps = 69/281 (24%)
Query: 186 GLLQAWGYNEYGQLGRGI---------TCEGLQGPRVIK--------------------G 216
G + WG+N GQLG GI CE L R ++ G
Sbjct: 3955 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4013
Query: 217 Y----------AKFLDEAPELEKITQ-------VSCGEYHSAAVSENGEVYTWGLGSVGQ 259
Y + + LE I V+ G H A+S GEVY+WG G+
Sbjct: 4014 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4073
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LGH + D+ PR + +L GI + DVA GG HS +T+ G LY WG + G+LG
Sbjct: 4074 LGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG--- 4127
Query: 320 QTRSFSLIPNESDTYFRNIPILVVP---NGVQLVAC--GHSHTLVYMRDGRIHGWGYNSY 374
SD+ + P LV + V VAC G + TL D + WG Y
Sbjct: 4128 ----------HSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDY 4177
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADA 414
G+ S P +D G V K+ G S L +
Sbjct: 4178 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4218
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG + G G + +R P+Q+ + + IA G H DG
Sbjct: 4220 AVYTWGKGDYHRLGH-GSDDHVRRPRQVQ-------GLQGKKVIAIATGSLHCVCCTEDG 4271
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
++TWG N+ GQLGDGT + P V LQ + V ++CG+ T A
Sbjct: 4272 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4318
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 74/186 (39%), Gaps = 22/186 (11%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+TQ++C E +S NG VYT S L P+ V L I +A
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------------DTLAPQLVQGLASRNIVKIA 500
Query: 290 C--GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
G H AL + G +Y+WG G+LG G +P E V
Sbjct: 501 AHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPLEEPKVISAFSGKQAGKHV 554
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGG 406
+ACG +++ +G ++ WG +YG+ + S P V G +V +A G G
Sbjct: 555 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSG 614
Query: 407 HSAVLA 412
+ LA
Sbjct: 615 DAQTLA 620
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 82/218 (37%), Gaps = 62/218 (28%)
Query: 246 NGEVYTWGLGSVGQLG--------------------HCSLQSGDKELL------------ 273
+G +Y WG GQLG L G++ L
Sbjct: 3954 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4013
Query: 274 -----------------PRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWGGSQAGQ 314
P + ++ +FIK VA GG H AL+S+G +Y+WG ++ G+
Sbjct: 4014 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4073
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LG G RS P ++ R I ++ VA G +H+ G ++ WG Y
Sbjct: 4074 LGHG--NRSPCDRPRVIES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRY 4123
Query: 375 GQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
G+ + S P V+ G V +A G G + L
Sbjct: 4124 GRLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTL 4161
>gi|301787735|ref|XP_002929284.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
[Ailuropoda melanoleuca]
Length = 4837
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 176/411 (42%), Gaps = 67/411 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
++ ++VWG N Q G L+ K P + N + +A G + AV
Sbjct: 2959 RTKVFVWGLNDKDQLG------GLKGSKIKVPSFSETLSALNV--VQVAGGSKSLFAVTV 3010
Query: 80 DGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPREN 135
+G ++ G G+LG G G P ++ L S VK ++ G H TA
Sbjct: 3011 EGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV----- 3065
Query: 136 DGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
DG +++ WG+ PRL T I ++CGS H AL+
Sbjct: 3066 DG-----KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSS 3118
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGP--RVIKGYAKFLDEAPELEKITQVSCG--EYHSA 241
G L WG EYG+LG G L+ +V+ G+ ++ QV+CG + +
Sbjct: 3119 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-----------RVIQVACGSRDAQTL 3167
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A+++ G V++WG G G+LG + + +P+ + L+G + + CG S ALT
Sbjct: 3168 ALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTKS 3224
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLV 359
G ++ WG +LG G SD + R ++ G ++V A G H L
Sbjct: 3225 GVVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3272
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
G+++ WG N +GQ N +T P+ V G+ + ++A G HS
Sbjct: 3273 VTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3323
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 134/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3069 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 3120
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 3121 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 3173
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 3174 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3230
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV++ G+VY
Sbjct: 3231 GKGDYFRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDAGQVYA 3281
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3282 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3327
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 3008 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQI-----TALSSYVVKKVAVHSGGRHATA 3062
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+
Sbjct: 3063 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------ 3116
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 3117 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3170
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 3171 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 3221
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH S K P+ V L G I VA G +H A+T G
Sbjct: 3222 TKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDAGQ 3278
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 3279 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3325
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 144/327 (44%), Gaps = 50/327 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +D+A G H+A V + G
Sbjct: 4063 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRGIEV--VDVAAGGAHSACVTAAGD 4114
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG E + P+ V+ LQ V ++CG+ + +D T+
Sbjct: 4115 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLC--LTDDDTV--- 4169
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 4170 --WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4227
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 4228 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4278
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G + VACG H+ AW S+
Sbjct: 4279 NDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAWSTSKPAS 4326
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPIL 341
G P + +P E + + + IPI+
Sbjct: 4327 AGKLP-----AQVPMEYN-HLQEIPII 4347
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 174/411 (42%), Gaps = 76/411 (18%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P C A A R + + G + AV +DG
Sbjct: 3957 IYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALATLRPVQLIGGEQTLFAVTADG 4007
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 4008 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE------- 4060
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG+ + PR+ + V+ G H ++ G L
Sbjct: 4061 ---GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAGDL 4115
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSEN 246
WG YG+LG + + L+ P+++ EA + ++ V+C G+ + ++++
Sbjct: 4116 YTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVVDVACGSGDAQTLCLTDD 4166
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4167 DTVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 4223
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTL 358
WG +LG G SD + R P VQ +A G H +
Sbjct: 4224 WGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCV 4265
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
DG ++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4266 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4316
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 129/276 (46%), Gaps = 25/276 (9%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N + P+L G + N I H +AL+ G + +WG + G+LG G
Sbjct: 472 RVYTQAYNSDTLAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG 531
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P+VI ++ + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 532 DTVP-LEEPKVISAFSG----KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 586
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + E +P V L G+ + DVACG + A+T G +++WG G+LG G
Sbjct: 587 ---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 643
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D V V CG ++ +DG+++ WG +
Sbjct: 644 DGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 691
Query: 379 NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ + YP ++ G +V +AAG H L +
Sbjct: 692 HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 124/253 (49%), Gaps = 30/253 (11%)
Query: 134 ENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N +GS + + QV+ GS + A++
Sbjct: 2953 ESAATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + A G G+LG GI+ + PR I + ++ K V G H+ A++
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYV------VKKVAVHSGGRHATALTV 3065
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS ALTS G LY
Sbjct: 3066 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELY 3122
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRD 363
WG + G+LG G T L P + + +L+ +Q VACG + TL +
Sbjct: 3123 TWGLGEYGRLGHGDNTT--QLKP-------KMVKVLLGHRVIQ-VACGSRDAQTLALTDE 3172
Query: 364 GRIHGWGYNSYGQ 376
G + WG +G+
Sbjct: 3173 GLVFSWGDGDFGK 3185
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 134/310 (43%), Gaps = 53/310 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHC 125
+ G +H A++S+G +++WG E G+LG G P ++ L+ E V + GAH
Sbjct: 4047 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4106
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCG 175
A L+ WG+ + P+L A + ++ V+CG
Sbjct: 4107 ACVTA----------AGDLYTWGKGRYGRLGHSDSEDQLKPKLV-EALQGHRVV-DVACG 4154
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + L++ + +WG +YG+LGRG +G + P I + +V
Sbjct: 4155 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVKV 4205
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G VYTWG G +LGH S D PR+V L G + +A G +
Sbjct: 4206 ECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSL 4262
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLV 350
H T G +Y WG + GQLG G T P LV V V
Sbjct: 4263 HCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRV 4309
Query: 351 ACGHSHTLVY 360
ACG +HTL +
Sbjct: 4310 ACGSAHTLAW 4319
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 45/285 (15%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+L A N + H A+A+ G +++WG + G+LG G + P+ +
Sbjct: 483 LAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVI 542
Query: 109 KQLQ----SEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT 164
+ V I+CG+ +AAI E L+ WG+ N+ RL G+
Sbjct: 543 SAFSGKQAGKHVVHIACGSTYSAAITAEGE---------LYTWGRG---NYGRLGHGSSE 590
Query: 165 PNTI-----------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
I + V+CGS +A++E G + +WG +YG+LGRG +G + P
Sbjct: 591 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTP 649
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
++I+ + +V CG S A++++G+VY+WG G +LGH G +E
Sbjct: 650 KLIEKLQDL--------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH-----GTEE 696
Query: 272 LL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ P+ + L G + DVA G H ALT +++WG + Q
Sbjct: 697 HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 136/293 (46%), Gaps = 33/293 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG G+ G G L PK + G AG + + IACG ++AA
Sbjct: 511 LAATGEVYSWGCGDGGRLGH-GDTVPLEEPKVIS-AFSGKQAGKHV--VHIACGSTYSAA 566
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E P V L+ V ++CG+ +A
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA------ 620
Query: 137 GTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
++W WG R G TP I + +V CGS +AL++ G +
Sbjct: 621 -VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQV 679
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG + +LG G T E ++ P++++G + +K+ V+ G H A++E+ E
Sbjct: 680 YSWGKGDNQRLGHG-TEEHVRYPKLLEGL--------QGKKVIDVAAGSTHCLALTEDSE 730
Query: 249 VYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
V++W GS Q H +L+ E P + LD I +ACG S A +S
Sbjct: 731 VHSW--GSNDQCQHFDTLRVTKPE--PAALPGLDTKHIVGIACGPAQSFAWSS 779
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 139/340 (40%), Gaps = 63/340 (18%)
Query: 56 CPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
C AN IAC + ++ +G ++T N P+ V+ L S
Sbjct: 446 CEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRN 495
Query: 116 VKSISCGA--HCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAF 163
+ I+ + H A+A +T ++ WG G P++ AF
Sbjct: 496 IIKIAAHSDGHHYLALA---------ATGEVYSWGCGDGGRLGHGDTVPLEEPKVI-SAF 545
Query: 164 TPNTI---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF 220
+ + ++CGS + A++ G L WG YG+LG G + E P ++ G
Sbjct: 546 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-SSEDEAIPMLVAGLKGL 604
Query: 221 LDEAPELEKITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
K+ V+CG + + AV+ENG+V++WG G G+LG D P+ +
Sbjct: 605 --------KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR---GGSDGCKTPKLIE 653
Query: 279 ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
L + + V CG S ALT G +Y+WG +LG G ++ + R
Sbjct: 654 KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG------------TEEHVRYP 701
Query: 339 PILVVPNGVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+L G ++ VA G +H L D +H WG N Q
Sbjct: 702 KLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 110/281 (39%), Gaps = 69/281 (24%)
Query: 186 GLLQAWGYNEYGQLGRGI---------TCEGLQGPRVIK--------------------G 216
G + WG+N GQLG GI CE L R ++ G
Sbjct: 3955 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4013
Query: 217 Y----------AKFLDEAPELEKITQ-------VSCGEYHSAAVSENGEVYTWGLGSVGQ 259
Y + + LE I V+ G H A+S GEVY+WG G+
Sbjct: 4014 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4073
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LGH + D+ PR + +L GI + DVA GG HS +T+ G LY WG + G+LG
Sbjct: 4074 LGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG--- 4127
Query: 320 QTRSFSLIPNESDTYFRNIPILVVP---NGVQLVAC--GHSHTLVYMRDGRIHGWGYNSY 374
SD+ + P LV + V VAC G + TL D + WG Y
Sbjct: 4128 ----------HSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDY 4177
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADA 414
G+ S P +D G V K+ G S L +
Sbjct: 4178 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4218
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG + G G + +R P+Q+ + + IA G H DG
Sbjct: 4220 AVYTWGKGDYHRLGH-GSDDHVRRPRQVQ-------GLQGKKVIAIATGSLHCVCCTEDG 4271
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
++TWG N+ GQLGDGT + P V LQ + V ++CG+ T A
Sbjct: 4272 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4318
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 74/186 (39%), Gaps = 22/186 (11%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+TQ++C E +S NG VYT S L P+ V L I +A
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------------DTLAPQLVQGLASRNIIKIA 500
Query: 290 C--GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
G H AL + G +Y+WG G+LG G +P E V
Sbjct: 501 AHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPLEEPKVISAFSGKQAGKHV 554
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGG 406
+ACG +++ +G ++ WG +YG+ + S P V G +V +A G G
Sbjct: 555 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSG 614
Query: 407 HSAVLA 412
+ LA
Sbjct: 615 DAQTLA 620
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 82/218 (37%), Gaps = 62/218 (28%)
Query: 246 NGEVYTWGLGSVGQLG--------------------HCSLQSGDKELL------------ 273
+G +Y WG GQLG L G++ L
Sbjct: 3954 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4013
Query: 274 -----------------PRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWGGSQAGQ 314
P + ++ +FIK VA GG H AL+S+G +Y+WG ++ G+
Sbjct: 4014 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4073
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LG G RS P ++ R I ++ VA G +H+ G ++ WG Y
Sbjct: 4074 LGHG--NRSPCDRPRVIES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRY 4123
Query: 375 GQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
G+ + S P V+ G V +A G G + L
Sbjct: 4124 GRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTL 4161
>gi|395527072|ref|XP_003765675.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Sarcophilus
harrisii]
Length = 4483
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 134/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
I+ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 2820 IFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAAITSSGE 2871
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 2872 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 2924
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 2925 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 2981
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV++ G+VY
Sbjct: 2982 GKGDYFRLGHGTDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDTGQVYA 3032
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3033 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3078
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 2759 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQI-----TALSNYVVKKVAVHSGGRHAMA 2813
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AAI
Sbjct: 2814 LTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT------ 2867
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 2868 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 2921
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 2922 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 2972
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH + K P+ V L G I VA G +H A+T G
Sbjct: 2973 TKSGVVWTWGKGDYFRLGHGTDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDTGQ 3029
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 3030 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3076
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 133/290 (45%), Gaps = 36/290 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +DIA G H+A + + G
Sbjct: 3814 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRGIEV--VDIAAGGAHSACITAAGD 3865
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG G E + P+ V+ LQ V I+CG+ + +D T+
Sbjct: 3866 LYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLC--LTDDDTV--- 3920
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 3921 --WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 3978
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 3979 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4029
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA-LTSKGA 303
GQLG + + + PR V AL G I VACG H+ A TSK A
Sbjct: 4030 NDEGQLGDGTTNAIQR---PRLVAALQGKKINRVACGSAHTLAWSTSKPA 4076
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 174/412 (42%), Gaps = 76/412 (18%)
Query: 22 AIYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
IY WG+NH GQ G G E ++++P C A A R + + G + AV +D
Sbjct: 3707 TIYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALAALRPIQLIGGEQTLFAVTAD 3757
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDG 137
G L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 3758 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE------ 3811
Query: 138 TISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
++ WG+ + PR+ + ++ G H ++ G
Sbjct: 3812 ----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDIAAGGAHSACITAAGD 3865
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAVSE 245
L WG YG+LG G + + L+ P++++ + ++ ++CG + + +++
Sbjct: 3866 LYTWGKGRYGRLGHGDSEDQLK-PKLVEALQGY--------RVIDIACGSGDAQTLCLTD 3916
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+ V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 3917 DDTVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVY 3973
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHT 357
WG +LG G SD + R P VQ +A G H
Sbjct: 3974 TWGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHC 4015
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
+ DG ++ WG N GQ + + P V G ++ ++A G H+
Sbjct: 4016 VCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 4067
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 166/393 (42%), Gaps = 69/393 (17%)
Query: 68 ACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTA 127
A G E A + + +F WG N+ QLG K P + L + V ++ G+
Sbjct: 2700 ASGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLF 2757
Query: 128 AIAEPREND--GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
A+ + G + RL + + PR V G H +AL+
Sbjct: 2758 AVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVD 2817
Query: 186 GLLQAWGYNEYGQLGR--GITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
G + +WG + G+LG + C+ PR+I EA + ++I ++CG HSAA+
Sbjct: 2818 GKIFSWGEGDDGKLGHFSRMNCDK---PRLI--------EALKTKRIRDIACGSSHSAAI 2866
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHSCALT 299
+ +GE+YTWGLG G+LGH GD +L P+ V L G + VACG + ALT
Sbjct: 2867 TSSGELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 2921
Query: 300 SKGALYAWGGSQAGQLGLG-------PQT---------------RSFSLIPNES------ 331
+G +++WG G+LG G PQ FSL +S
Sbjct: 2922 DEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 2981
Query: 332 ------------DTYFRNIPILVVPNGVQLV--ACGHSHTLVYMRDGRIHGWGYNSYGQA 377
D + R ++ G ++V A G H L G+++ WG N +GQ
Sbjct: 2982 GKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQ 3041
Query: 378 ANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
N +T P+ V G+ + ++A G HS
Sbjct: 3042 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3074
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 135/310 (43%), Gaps = 53/310 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ G +H A++S+G +++WG E G+LG G P ++ L+ V I+ G +
Sbjct: 3798 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHS 3857
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCG 175
A I + L+ WG+ + + RL G P + + ++CG
Sbjct: 3858 ACIT---------AAGDLYTWGKGR---YGRLGHGDSEDQLKPKLVEALQGYRVIDIACG 3905
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + L++ + +WG +YG+LGRG +G + P I + +V
Sbjct: 3906 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVKV 3956
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G VYTWG G +LGH S D PR+V L G + +A G +
Sbjct: 3957 ECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSL 4013
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLV 350
H T G +Y WG + GQLG G T P LV + V
Sbjct: 4014 HCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKINRV 4060
Query: 351 ACGHSHTLVY 360
ACG +HTL +
Sbjct: 4061 ACGSAHTLAW 4070
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 110/247 (44%), Gaps = 23/247 (9%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
Q+ G + A++ G L A GY G+LG G T E + P +++ ++K+
Sbjct: 3743 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGT-ESVSTPTLLESIQHVF-----IKKV 3796
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
V+ G H A+S GEVY+WG G+LGH + D+ PR + +L GI + D+A
Sbjct: 3797 A-VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGIEVVDIAA 3852
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
GG HS +T+ G LY WG + G+LG G E+ +R I I
Sbjct: 3853 GGAHSACITAAGDLYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDI---------- 3902
Query: 351 AC--GHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGH 407
AC G + TL D + WG YG+ S P +D G V K+ G
Sbjct: 3903 ACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQF 3962
Query: 408 SAVLADA 414
S L +
Sbjct: 3963 SVALTKS 3969
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 55/121 (45%), Gaps = 9/121 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG + G G + +R P+Q+ + + IA G H DG
Sbjct: 3971 AVYTWGKGDYHRLGH-GSDDHVRRPRQVQ-------GLQGKKVIAIATGSLHCVCCTEDG 4022
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGTIS 140
++TWG N+ GQLGDGT + P V LQ + + ++CG AH A N G +
Sbjct: 4023 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPANAGKLP 4082
Query: 141 T 141
T
Sbjct: 4083 T 4083
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 76/159 (47%), Gaps = 30/159 (18%)
Query: 157 RLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKG 216
R++ A+ +T++ G V V +L G + +WG +YG+LGRG +G + P++I+
Sbjct: 386 RVYMQAYNSDTLV-----GVVAVFSLI-FGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEK 438
Query: 217 YAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCS--------LQSG 268
+ +V CG S A++++G+VY+WG G +LGH + L G
Sbjct: 439 LQDL--------DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG 490
Query: 269 DKELLP-------RRVVALDGIFIKDVACGGVHSCALTS 300
+ LP + LD I +ACG S A +S
Sbjct: 491 LQATLPQANCLSKKXXXXLDTKHIVGIACGPAQSFAWSS 529
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 46/115 (40%), Gaps = 27/115 (23%)
Query: 230 ITQVSCGEYHSAAVSENGEVY------------------------TWGLGSVGQLGHCSL 265
ITQ++C E +S NG VY +WG G G+LG
Sbjct: 368 ITQIACAEKRFLILSRNGRVYMQAYNSDTLVGVVAVFSLIFGQVWSWGDGDYGKLGR--- 424
Query: 266 QSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQ 320
D P+ + L + + V CG S ALT G +Y+WG +LG G +
Sbjct: 425 GGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE 479
Score = 41.6 bits (96), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ GR G + + PK + + + + CG + + A+ DG
Sbjct: 411 VWSWGDGDYGKLGRGGSD-GCKTPKLIE-------KLQDLDVVKVRCGSQFSVALTKDGQ 462
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
+++WG + +LG GTEE ++P+ ++ LQ+
Sbjct: 463 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQATL 495
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 28/131 (21%)
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +++WG ++G+LG G +G K P+ +++LQ V + CG+ + A+ + DG +
Sbjct: 409 GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTK----DGQVY 464
Query: 141 TSRLWVWGQNQG--------SNFPRLFWGAFTPNTIICQVSCGS---------VHVVALS 183
+ W G NQ +P+L G + Q +C S H+V ++
Sbjct: 465 S---WGKGDNQRLGHGTEEHVRYPKLLEGL---QATLPQANCLSKKXXXXLDTKHIVGIA 518
Query: 184 ECGLLQAWGYN 194
CG Q++ ++
Sbjct: 519 -CGPAQSFAWS 528
>gi|340503755|gb|EGR30283.1| hypothetical protein IMG5_135970 [Ichthyophthirius multifiliis]
Length = 361
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 127/251 (50%), Gaps = 14/251 (5%)
Query: 166 NTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAP 225
N I Q+SCG+ +AL++ L+ +WG N YG LG G E P++++ FLD
Sbjct: 22 NIGIIQISCGTNFCLALTQDFLVFSWGDNSYGNLGLG-HLESSHLPQLVR----FLDN-- 74
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFI 285
+ KI +SCG+YHSAA S+ G+V+TWGLG+ GQLG +L + ++ L R L+G I
Sbjct: 75 DNIKIQHISCGQYHSAATSKTGQVFTWGLGNFGQLGKGNLANFNQPDLVRG--DLEGKNI 132
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
CGG H+ T++G Y+WG + Q + + ++ N N P ++
Sbjct: 133 LATVCGGYHNVCFTNEGYTYSWGCLEVDQQNIKSSNIPYPMMLNSEFIKEENNPFNMI-- 190
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ-AANEKSTYAWYPSPVDWCVGEVRK-LAA 403
+ +A G + + + I+ WG N GQ S + PS V G + K +A
Sbjct: 191 -ITYIAAGADYCMAIEQKRIIYAWGRNKEGQLGIGGISNFVDQPSKVQGLDGNLMKSIAC 249
Query: 404 GGGHSAVLADA 414
G HS L ++
Sbjct: 250 GEEHSLFLTES 260
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 151/337 (44%), Gaps = 42/337 (12%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVK--SISCG 122
+ I+CG A+ D +F+WG N +G LG G E P+ V+ L ++ +K ISCG
Sbjct: 26 IQISCGTNFCLALTQDFLVFSWGDNSYGNLGLGHLESSHLPQLVRFLDNDNIKIQHISCG 85
Query: 123 AHCTAAIAEPRENDGTISTSRLWVWG--------QNQGSNF--PRLFWGAFTPNTIICQV 172
+ +AA T T +++ WG + +NF P L G I+ V
Sbjct: 86 QYHSAA---------TSKTGQVFTWGLGNFGQLGKGNLANFNQPDLVRGDLEGKNILATV 136
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA--PELEKI 230
CG H V + G +WG E Q + I + P ++ ++F+ E P I
Sbjct: 137 -CGGYHNVCFTNEGYTYSWGCLEVDQ--QNIKSSNIPYPMMLN--SEFIKEENNPFNMII 191
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
T ++ G + A+ + +Y WG GQLG + + + P +V LDG +K +AC
Sbjct: 192 TYIAAGADYCMAIEQKRIIYAWGRNKEGQLGIGGISNFVDQ--PSKVQGLDGNLMKSIAC 249
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
G HS LT G ++A G S+ G+LGLG + + + P E NI VV +
Sbjct: 250 GEEHSLFLTESGRIFACGSSKDGKLGLGIR-NTILMTPQEI-----NIKAKVVK-----I 298
Query: 351 ACGHSHTLVYMRDGRI-HGWGYNSYGQAANEKSTYAW 386
ACG +H++ + + Y +A K Y W
Sbjct: 299 ACGSTHSMALAINKEVEQNQDEYEYLEAKETKVIYTW 335
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 137/327 (41%), Gaps = 51/327 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N G G + P+L N + I+CG H+AA + G
Sbjct: 44 VFSWGDNSYGNLGLG------HLESSHLPQLVRFLDNDNIKIQHISCGQYHSAATSKTGQ 97
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAHCTAAIAEPRENDG-TIS 140
+FTWG FGQLG G P+ V+ L+ + + + CG + N+G T S
Sbjct: 98 VFTWGLGNFGQLGKGNLANFNQPDLVRGDLEGKNILATVCGGYHNVCFT----NEGYTYS 153
Query: 141 TSRLWVWGQNQGSN---FPRLFWGAFTP------NTIICQVSCGSVHVVALSECGLLQAW 191
L V QN S+ +P + F N II ++ G+ + +A+ + ++ AW
Sbjct: 154 WGCLEVDQQNIKSSNIPYPMMLNSEFIKEENNPFNMIITYIAAGADYCMAIEQKRIIYAW 213
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G N+ GQLG G + P ++G L + ++CGE HS ++E+G ++
Sbjct: 214 GRNKEGQLGIGGISNFVDQPSKVQGLDGNL--------MKSIACGEEHSLFLTESGRIFA 265
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT------------ 299
G G+LG L + L+ + + + +K +ACG HS AL
Sbjct: 266 CGSSKDGKLG---LGIRNTILMTPQEINIKAKVVK-IACGSTHSMALAINKEVEQNQDEY 321
Query: 300 ------SKGALYAWGGSQAGQLGLGPQ 320
+Y WG +LG G +
Sbjct: 322 EYLEAKETKVIYTWGNGWESKLGHGDK 348
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 10/119 (8%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL-DIACGHEHTA 75
I K IY WG N GQ G G + P ++ G + + IACG EH+
Sbjct: 204 IEQKRIIYAWGRNKEGQLGIGGISNFVDQPSKVQ--------GLDGNLMKSIACGEEHSL 255
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
+ G +F G+++ G+LG G + ++++ VK I+CG+ + A+A +E
Sbjct: 256 FLTESGRIFACGSSKDGKLGLGIRNTILMTPQEINIKAKVVK-IACGSTHSMALAINKE 313
>gi|403263471|ref|XP_003924055.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Saimiri boliviensis
boliviensis]
Length = 1024
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 118/250 (47%), Gaps = 28/250 (11%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I Q++CG H +ALS+ G L AWG N +GQLG G P++++ L P
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEH----LSGIP--- 192
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
+ Q+S GE HS A+S +G +Y+WG GQLG +S D P + ALD ++ +
Sbjct: 193 -LAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDS---PSLIEALDNQKVEFL 248
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---N 345
ACGG H+ LT G L+ +G + GQLG N + R P LV N
Sbjct: 249 ACGGSHTALLTQDGLLFTFGAGKHGQLG-----------HNSTQNELR--PCLVAELAGN 295
Query: 346 GVQLVACGHSHTLVYMRD-GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAG 404
V +ACG HTL Y+ D G++ +G GQ N + P P+ E K +
Sbjct: 296 RVTQIACGRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTRDQLIPLPMKVSSNEDLKFESH 355
Query: 405 GGHSAVLADA 414
++ A
Sbjct: 356 TSEKELIMIA 365
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 92/185 (49%), Gaps = 19/185 (10%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+KI Q++CG+YHS A+S+ GE++ WG GQLG + P+ V L GI +
Sbjct: 138 KKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG--RKFPSTTTPQIVEHLSGIPLAQ 195
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP--- 344
++ G HS AL+ G +Y+WG ++ GQLGL T ++ P L+
Sbjct: 196 ISAGEAHSMALSMSGNIYSWGKNEFGQLGL-------------DHTESKDSPSLIEALDN 242
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAA 403
V+ +ACG SHT + +DG + +G +GQ + + P V G V ++A
Sbjct: 243 QKVEFLACGGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIAC 302
Query: 404 GGGHS 408
G H+
Sbjct: 303 GRWHT 307
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 32/213 (15%)
Query: 62 SRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSIS 120
+ + I CG H+ A++ G LF WG N GQLG G + P+ V+ L + IS
Sbjct: 138 KKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLSGIPLAQIS 197
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQN----------QGSNFPRLFWGAFTPNTIIC 170
G + A++ + ++ WG+N + + P L N +
Sbjct: 198 AGEAHSMALS---------MSGNIYSWGKNEFGQLGLDHTESKDSPSLIEAL--DNQKVE 246
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
++CG H L++ GLL +G ++GQLG T L+ P ++ A ++
Sbjct: 247 FLACGGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELR-PCLVAELAG--------NRV 297
Query: 231 TQVSCGEYHSAA-VSENGEVYTWGLGSVGQLGH 262
TQ++CG +H+ A VS+ G+V+++G G GQLG+
Sbjct: 298 TQIACGRWHTLAYVSDLGKVFSFGSGKEGQLGN 330
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 15/190 (7%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G GR+ Q+ L G P I+ G H+ A++ G
Sbjct: 159 LFAWGQNLHGQLG-VGRKFPSTTTPQIVEHLSGIPLA------QISAGEAHSMALSMSGN 211
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST- 141
+++WG NEFGQLG E + P ++ L ++ V+ ++CG TA + + DG + T
Sbjct: 212 IYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSHTALLTQ----DGLLFTF 267
Query: 142 --SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYNEYGQ 198
+ G N N R A + Q++CG H +A +S+ G + ++G + GQ
Sbjct: 268 GAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWHTLAYVSDLGKVFSFGSGKEGQ 327
Query: 199 LGRGITCEGL 208
LG G T + L
Sbjct: 328 LGNGGTRDQL 337
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 61/136 (44%), Gaps = 14/136 (10%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD-G 81
++ +G GQ G + +LR P L AG +R IACG HT A SD G
Sbjct: 264 LFTFGAGKHGQLGHNSTQNELR------PCLVAELAG--NRVTQIACGRWHTLAYVSDLG 315
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F++G+ + GQLG+G + P +K +E +K S + I EN +
Sbjct: 316 KVFSFGSGKEGQLGNGGTRDQLIPLPMKVSSNEDLKFESHTSE-KELIMIAGENQSIL-- 372
Query: 142 SRLWVWGQNQGSNFPR 157
LW+ +N N R
Sbjct: 373 --LWIKKENSYVNLRR 386
>gi|222629908|gb|EEE62040.1| hypothetical protein OsJ_16822 [Oryza sativa Japonica Group]
Length = 841
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 116/419 (27%), Positives = 173/419 (41%), Gaps = 51/419 (12%)
Query: 15 DNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL----DIACG 70
D+ + +YVWG + R G + +R ++ F P SR + + CG
Sbjct: 29 DDCDSLGDVYVWGEVFCENSVRVGSDTIIRSTEKTD---FLLPKPLESRLVLDVYHVDCG 85
Query: 71 HEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIA 130
H A V +G +FTWG + G+LG GT E HP V+ L + V ++CG T A+
Sbjct: 86 VRHAALVTRNGDVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVACGEFHTCAVT 145
Query: 131 EPRE----NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
E DGT + L G + G P+ GA + VSCG+ H ++ G
Sbjct: 146 TTGELYTWGDGTHNVG-LLGHGTDAGHWIPKRISGALD-GLPVAYVSCGTWHTALITSMG 203
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE- 245
L +G +G LG G + P+ ++ + K V+CG +H+AA+ E
Sbjct: 204 QLFTFGDGSFGVLGHG-NLTSISCPKEVESLSGL--------KTIAVACGVWHTAAIVEV 254
Query: 246 ----------NGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGV 293
G+++TWG G +LGH GDKE L P V +L VACG
Sbjct: 255 IVTHSSSSVSAGKLFTWGDGDKHRLGH-----GDKESRLKPTCVASLIDYDFYRVACGHS 309
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG 353
+ LT+ G + + G S GQLG PN + + V VACG
Sbjct: 310 LTVCLTTSGKVLSMGNSVYGQLG----------NPNSDGRLPCLVEDRIAGEHVLQVACG 359
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 411
H V + WG + G+ + P+ V+ VR +A G +A +
Sbjct: 360 SYHVAVLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACGANFTAAI 418
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 131/313 (41%), Gaps = 69/313 (22%)
Query: 45 IPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKH 104
IPK++ L G P ++CG HTA + S G LFT+G FG LG G
Sbjct: 173 IPKRISGALDGLPVAY------VSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISC 226
Query: 105 PEKVKQLQSEFVKSISCGAHCTAAIAEP--RENDGTISTSRLWVWGQN------QGSNFP 156
P++V+ L +++CG TAAI E + ++S +L+ WG G
Sbjct: 227 PKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKES 286
Query: 157 RL--FWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVI 214
RL A + +V+CG V L+ G + + G + YGQLG P
Sbjct: 287 RLKPTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLG---------NPNSD 337
Query: 215 KGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLP 274
+++ E + QV+CG YH A ++ EV+TWG G+ G+LGH ++ D+++ P
Sbjct: 338 GRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEVFTWGKGANGRLGHGDIE--DRKV-P 394
Query: 275 RRVVALDGIFIKDVACGG-----------------------------------------V 293
+V AL ++ +ACG V
Sbjct: 395 TQVEALKDRAVRHIACGANFTAAICLHKWVSGADQSQCSSCQQPFGFTRKRHNCYNCGLV 454
Query: 294 HSCALTSKGALYA 306
H A TS+ AL A
Sbjct: 455 HCNACTSRKALRA 467
>gi|350593460|ref|XP_003133446.3| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
scrofa]
Length = 4060
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 178/412 (43%), Gaps = 69/412 (16%)
Query: 20 KSAIYVWGYNHSGQTG-RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
++ ++VWG N Q G KG + ++ P + N + +A G + AV
Sbjct: 2183 RTKVFVWGLNDKDQLGGLKGSKIKV-------PSFSETLSALNV--VQVAGGSKSLFAVT 2233
Query: 79 SDGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRE 134
+G ++ G G+LG G G P ++ L S VK ++ G H TA
Sbjct: 2234 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV---- 2289
Query: 135 NDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSE 184
DG +++ WG+ PRL T I ++CGS H AL+
Sbjct: 2290 -DG-----KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTS 2341
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGP--RVIKGYAKFLDEAPELEKITQVSCG--EYHS 240
G L WG EYG+LG G L+ +V+ G+ ++ QV+CG + +
Sbjct: 2342 SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-----------RVIQVACGSRDAQT 2390
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
A+++ G V++WG G G+LG + + +P+ + L+G + + CG S ALT
Sbjct: 2391 LALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTK 2447
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTL 358
G ++ WG +LG G SD + R ++ G ++V A G H L
Sbjct: 2448 SGVVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRGKKIVHVAVGALHCL 2495
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
G+++ WG N +GQ N +T P+ V G+ + ++A G HS
Sbjct: 2496 AVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 2547
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 134/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 2293 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 2344
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 2345 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 2397
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 2398 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 2454
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV++ G+VY
Sbjct: 2455 GKGDYFRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDAGQVYA 2505
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 2506 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 2551
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 2232 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQI-----TALSSYVVKKVAVHSGGRHATA 2286
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+
Sbjct: 2287 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------ 2340
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 2341 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 2394
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 2395 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 2445
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH S K P+ V L G I VA G +H A+T G
Sbjct: 2446 TKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDAGQ 2502
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 2503 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 2549
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 124/253 (49%), Gaps = 30/253 (11%)
Query: 134 ENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N +GS + + QV+ GS + A++
Sbjct: 2177 ESAATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2235
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + A G G+LG GI+ + PR I + ++ K V G H+ A++
Sbjct: 2236 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYV------VKKVAVHSGGRHATALTV 2289
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS ALTS G LY
Sbjct: 2290 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELY 2346
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRD 363
WG + G+LG G T L P + + +L+ +Q VACG + TL +
Sbjct: 2347 TWGLGEYGRLGHGDNTT--QLKP-------KMVKVLLGHRVIQ-VACGSRDAQTLALTDE 2396
Query: 364 GRIHGWGYNSYGQ 376
G + WG +G+
Sbjct: 2397 GLVFSWGDGDFGK 2409
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 141/327 (43%), Gaps = 51/327 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +D+A G H+A V + G
Sbjct: 3287 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRGIEV--VDVAAGGAHSACVTAAGD 3338
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG E + P+ V LQ V ++CG+ + +D T+
Sbjct: 3339 LYTWGKGRYGRLGHSDSEDQLKPKLVDALQGHRVVDVACGSGDAQTLC--LTDDDTV--- 3393
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 3394 --WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 3451
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+G YTWG
Sbjct: 3452 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGS-YTWGD 3501
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G + VACG H+ AW S+
Sbjct: 3502 NDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAWSTSKPAS 3549
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPIL 341
G P + +P E + + + IPI+
Sbjct: 3550 AGKLP-----AQVPMEYN-HLQEIPII 3570
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 173/411 (42%), Gaps = 77/411 (18%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P C A A R + + G + AV +DG
Sbjct: 3181 IYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALAALRPVQLIGGEQTLFAVTADG 3231
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 3232 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE------- 3284
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG+ + PR+ + V+ G H ++ G L
Sbjct: 3285 ---GEVYSWGEAEDGKLGHGNRSPCDRPRVIES--LRGIEVVDVAAGGAHSACVTAAGDL 3339
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSEN 246
WG YG+LG + + L+ P+++ +A + ++ V+C G+ + ++++
Sbjct: 3340 YTWGKGRYGRLGHSDSEDQLK-PKLV--------DALQGHRVVDVACGSGDAQTLCLTDD 3390
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 3391 DTVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 3447
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTL 358
WG +LG G SD + R P VQ +A G H +
Sbjct: 3448 WGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCV 3489
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
DG + WG N GQ + + P V G +V ++A G H+
Sbjct: 3490 CCTEDGS-YTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 3539
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 134/310 (43%), Gaps = 54/310 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHC 125
+ G +H A++S+G +++WG E G+LG G P ++ L+ E V + GAH
Sbjct: 3271 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 3330
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCG 175
A L+ WG+ + P+L A + ++ V+CG
Sbjct: 3331 ACVTA----------AGDLYTWGKGRYGRLGHSDSEDQLKPKLV-DALQGHRVV-DVACG 3378
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + L++ + +WG +YG+LGRG +G + P I + +V
Sbjct: 3379 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVKV 3429
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G VYTWG G +LGH S D PR+V L G + +A G +
Sbjct: 3430 ECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSL 3486
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLV 350
H T G+ Y WG + GQLG G T P LV V V
Sbjct: 3487 HCVCCTEDGS-YTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRV 3532
Query: 351 ACGHSHTLVY 360
ACG +HTL +
Sbjct: 3533 ACGSAHTLAW 3542
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 110/281 (39%), Gaps = 69/281 (24%)
Query: 186 GLLQAWGYNEYGQLGRGI---------TCEGLQGPRVIK--------------------G 216
G + WG+N GQLG GI CE L R ++ G
Sbjct: 3179 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATG 3237
Query: 217 Y----------AKFLDEAPELEKITQ-------VSCGEYHSAAVSENGEVYTWGLGSVGQ 259
Y + + LE I V+ G H A+S GEVY+WG G+
Sbjct: 3238 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3297
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LGH + D+ PR + +L GI + DVA GG HS +T+ G LY WG + G+LG
Sbjct: 3298 LGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG--- 3351
Query: 320 QTRSFSLIPNESDTYFRNIPILVVP---NGVQLVAC--GHSHTLVYMRDGRIHGWGYNSY 374
SD+ + P LV + V VAC G + TL D + WG Y
Sbjct: 3352 ----------HSDSEDQLKPKLVDALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDY 3401
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADA 414
G+ S P +D G V K+ G S L +
Sbjct: 3402 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 3442
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 82/218 (37%), Gaps = 62/218 (28%)
Query: 246 NGEVYTWGLGSVGQLG--------------------HCSLQSGDKELL------------ 273
+G +Y WG GQLG L G++ L
Sbjct: 3178 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATG 3237
Query: 274 -----------------PRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWGGSQAGQ 314
P + ++ +FIK VA GG H AL+S+G +Y+WG ++ G+
Sbjct: 3238 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3297
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LG G RS P ++ R I ++ VA G +H+ G ++ WG Y
Sbjct: 3298 LGHG--NRSPCDRPRVIES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRY 3347
Query: 375 GQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
G+ + S P VD G V +A G G + L
Sbjct: 3348 GRLGHSDSEDQLKPKLVDALQGHRVVDVACGSGDAQTL 3385
>gi|351699519|gb|EHB02438.1| Putative E3 ubiquitin-protein ligase HERC2 [Heterocephalus glaber]
Length = 4833
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 175/410 (42%), Gaps = 63/410 (15%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
++ ++VWG N Q G L+ K P + N + +A G + AV
Sbjct: 2960 VRTKVFVWGLNDKDQLG------GLKGSKIKVPSFSETLSALNV--VQVAGGSKSLFAVT 3011
Query: 79 SDGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRE 134
+G ++ G G+LG G G P ++ L S VK ++ G H TA
Sbjct: 3012 VEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV---- 3067
Query: 135 NDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSE 184
DG +++ WG+ PRL I ++CGS H AL+
Sbjct: 3068 -DG-----KVFSWGEGDDGKLGHFSRMNCDKPRLIEALRAKR--IRDIACGSSHSAALTS 3119
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAA 242
G L WG EYG+LG G L+ P+++K ++ QV+CG + + A
Sbjct: 3120 SGELYTWGLGEYGRLGHGDNTTQLK-PKMVKVLLG--------HRVIQVACGSRDAQTLA 3170
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
+++ G V++WG G G+LG + + +P+ + L+G + + CG S ALT G
Sbjct: 3171 LTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTKSG 3227
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLVY 360
++ WG +LG G SD + R ++ G ++V A G H L
Sbjct: 3228 VVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3275
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
G+++ WG N +GQ N +T P+ V G+ + ++A G HS
Sbjct: 3276 TDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3325
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3071 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALRAKRIRDIACGSSHSAALTSSGE 3122
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 3123 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 3175
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 3176 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3232
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV+++G+VY
Sbjct: 3233 GKGDYFRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDSGQVYA 3283
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3284 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3329
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 3010 VTVEGKVYACGEATNGRLGLGLSSGTVPIPRQI-----TALSSYVVKKVAVHSGGRHATA 3064
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+
Sbjct: 3065 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALRAKRIRDIACGSSHSAALT------ 3118
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 3119 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3172
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 3173 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 3223
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH S K P+ V L G I VA G +H A+T G
Sbjct: 3224 TKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDSGQ 3280
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 3281 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3327
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 144/327 (44%), Gaps = 50/327 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +D+A G H+A V + G
Sbjct: 4064 VYSWGEAEDGKLGHGSRSPCDR------PRVVESLRGIEV--VDVAAGGAHSACVTAAGD 4115
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG E + P+ V+ LQ V ++CG+ + +D T+
Sbjct: 4116 LYTWGKGRYGRLGHSDSEDQLKPKLVEVLQGHRVVDVACGSGDAQTLC--LTDDDTV--- 4170
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 4171 --WSWGDGDYGKLGRGGSDGCKVPMKIESLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4228
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 4229 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4279
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G + VACG H+ AW S+
Sbjct: 4280 NDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAWSTSKPSS 4327
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPIL 341
G P + +P E + + + IPI+
Sbjct: 4328 AGKLP-----AQVPMEYN-HLQEIPII 4348
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 176/412 (42%), Gaps = 78/412 (18%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P C A A R + + G + AV +DG
Sbjct: 3958 IYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALATLRPVQLIGGEQTLFAVTADG 4008
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
L+ G G+LG G E P ++ +Q F++ ++ G HC A +E
Sbjct: 4009 KLYATGYGAGGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSE------- 4061
Query: 139 ISTSRLWVWGQNQGSNFPRLFWGAFTP-----------NTIICQVSCGSVHVVALSECGL 187
++ WG+ + +L G+ +P + V+ G H ++ G
Sbjct: 4062 ---GEVYSWGEAEDG---KLGHGSRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGD 4115
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSE 245
L WG YG+LG + + L+ P+++ E + ++ V+C G+ + +++
Sbjct: 4116 LYTWGKGRYGRLGHSDSEDQLK-PKLV--------EVLQGHRVVDVACGSGDAQTLCLTD 4166
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+ V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4167 DDTVWSWGDGDYGKLGR---GGSDGCKVPMKIESLTGLGVVKVECGSQFSVALTKSGAVY 4223
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHT 357
WG +LG G SD + R P VQ +A G H
Sbjct: 4224 TWGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHC 4265
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
+ DG ++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4266 VCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4317
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 129/276 (46%), Gaps = 25/276 (9%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N + P+L G + N + H +AL+ G + +WG + G+LG G
Sbjct: 472 RVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHG 531
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P+VI ++ + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 532 DTVP-LEEPKVISAFSGKQGG----KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 586
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + E +P V L G+ + DVACG + A+T G +++WG G+LG G
Sbjct: 587 ---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 643
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D V V CG ++ +DG+++ WG +
Sbjct: 644 DGCKTPKLIEKLQDLE------------VVKVRCGSQFSVALTKDGQVYSWGKGDNQRLG 691
Query: 379 NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ + YP ++ G +V +AAG H L +
Sbjct: 692 HGTEEHVRYPRLLEGLHGKKVIDVAAGSTHCLALTE 727
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 135/314 (42%), Gaps = 53/314 (16%)
Query: 63 RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISC 121
R + + G +H A++S+G +++WG E G+LG G+ P V+ L+ E V +
Sbjct: 4044 RKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVVESLRGIEVVDVAAG 4103
Query: 122 GAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQ 171
GAH A L+ WG+ + P+L +
Sbjct: 4104 GAHSACVTA----------AGDLYTWGKGRYGRLGHSDSEDQLKPKLV--EVLQGHRVVD 4151
Query: 172 VSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK 229
V+CGS + L++ + +WG +YG+LGRG +G + P I+
Sbjct: 4152 VACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIESLTGL--------G 4202
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ +V CG S A++++G VYTWG G +LGH S D PR+V L G + +A
Sbjct: 4203 VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIA 4259
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NG 346
G +H T G +Y WG + GQLG G T P LV
Sbjct: 4260 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKK 4306
Query: 347 VQLVACGHSHTLVY 360
V VACG +HTL +
Sbjct: 4307 VNRVACGSAHTLAW 4320
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 133/285 (46%), Gaps = 45/285 (15%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+L A N + H A+A+ G +F+WG + G+LG G + P+ +
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKVI 542
Query: 109 KQLQ----SEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT 164
+ V I+CG+ +AAI E L+ WG+ N+ RL G+
Sbjct: 543 SAFSGKQGGKHVVHIACGSTYSAAITAEGE---------LYTWGRG---NYGRLGHGSSE 590
Query: 165 PNTI-----------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
I + V+CGS +A++E G + +WG +YG+LGRG +G + P
Sbjct: 591 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTP 649
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
++I+ ++ +V CG S A++++G+VY+WG G +LGH G +E
Sbjct: 650 KLIEKLQDL--------EVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGH-----GTEE 696
Query: 272 LL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ PR + L G + DVA G H ALT +++WG + Q
Sbjct: 697 HVRYPRLLEGLHGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 133/293 (45%), Gaps = 33/293 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++ WG G+ G G L PK + F G + IACG ++AA
Sbjct: 511 LAATGEVFSWGCGDGGRLGH-GDTVPLEEPKVI--SAFSGKQGGK-HVVHIACGSTYSAA 566
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E P V L+ V ++CG+ +A
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA------ 620
Query: 137 GTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
++W WG R G TP I + +V CGS VAL++ G +
Sbjct: 621 -VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLEVVKVRCGSQFSVALTKDGQV 679
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG + +LG G T E ++ PR+++G +K+ V+ G H A++E+ E
Sbjct: 680 YSWGKGDNQRLGHG-TEEHVRYPRLLEGLHG--------KKVIDVAAGSTHCLALTEDSE 730
Query: 249 VYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
V++W GS Q H +L+ E P + LD I +ACG S A +S
Sbjct: 731 VHSW--GSNDQCQHFDTLRVTKPE--PAALPGLDTKHIVGIACGPAQSFAWSS 779
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 112/281 (39%), Gaps = 69/281 (24%)
Query: 186 GLLQAWGYNEYGQLGRGI---------TCEGLQGPRVIK--------------------G 216
G + WG+N GQLG GI CE L R ++ G
Sbjct: 3956 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4014
Query: 217 YAKFLD---------EAPELEKITQ--------VSCGEYHSAAVSENGEVYTWGLGSVGQ 259
Y AP L + Q V+ G H A+S GEVY+WG G+
Sbjct: 4015 YGAGGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4074
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LGH S D+ PR V +L GI + DVA GG HS +T+ G LY WG + G+LG
Sbjct: 4075 LGHGSRSPCDR---PRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG--- 4128
Query: 320 QTRSFSLIPNESDTYFRNIPILV-VPNGVQL--VAC--GHSHTLVYMRDGRIHGWGYNSY 374
SD+ + P LV V G ++ VAC G + TL D + WG Y
Sbjct: 4129 ----------HSDSEDQLKPKLVEVLQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDY 4178
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADA 414
G+ S P ++ G V K+ G S L +
Sbjct: 4179 GKLGRGGSDGCKVPMKIESLTGLGVVKVECGSQFSVALTKS 4219
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 100/222 (45%), Gaps = 46/222 (20%)
Query: 166 NTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAP 225
N + Q++C + LS G + YN P++++G A +
Sbjct: 451 NLGVTQIACAEKRFLILSRNGRVYTQAYNS-----------DTLAPQLVQGLA-----SR 494
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI 283
+ KI S G +H A++ GEV++WG G G+LGH GD L P+ + A G
Sbjct: 495 NIVKIAAHSDG-HHYLALAATGEVFSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGK 548
Query: 284 ----FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIP 339
+ +ACG +S A+T++G LY WG G+LG G + IP
Sbjct: 549 QGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-------------SSEDEAIP 595
Query: 340 ILVV-PNGVQL--VAC--GHSHTLVYMRDGRIHGWGYNSYGQ 376
+LV G+++ VAC G + TL +G++ WG YG+
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG + G G + +R P+Q+ + + IA G H DG
Sbjct: 4221 AVYTWGKGDYHRLGH-GSDDHVRRPRQVQ-------GLQGKKVIAIATGSLHCVCCTEDG 4272
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
++TWG N+ GQLGDGT + P V LQ + V ++CG+ T A
Sbjct: 4273 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4319
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 83/218 (38%), Gaps = 62/218 (28%)
Query: 246 NGEVYTWGLGSVGQLG--------------------HCSLQSGDKELL------------ 273
+G +Y WG GQLG L G++ L
Sbjct: 3955 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4014
Query: 274 -----------------PRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWGGSQAGQ 314
P + ++ +FI+ VA GG H AL+S+G +Y+WG ++ G+
Sbjct: 4015 YGAGGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4074
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LG G +RS P ++ R I ++ VA G +H+ G ++ WG Y
Sbjct: 4075 LGHG--SRSPCDRPRVVES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRY 4124
Query: 375 GQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
G+ + S P V+ G V +A G G + L
Sbjct: 4125 GRLGHSDSEDQLKPKLVEVLQGHRVVDVACGSGDAQTL 4162
>gi|410960764|ref|XP_003986957.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 2 [Felis
catus]
Length = 4844
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 176/411 (42%), Gaps = 67/411 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
++ ++VWG N Q G L+ K P + N + +A G + AV
Sbjct: 2966 RTKVFVWGLNDKDQLG------GLKGSKIKVPSFSETLSALNV--VQVAGGSKSLFAVTV 3017
Query: 80 DGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPREN 135
+G ++ G G+LG G G P ++ L S VK ++ G H TA
Sbjct: 3018 EGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV----- 3072
Query: 136 DGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
DG +++ WG+ PRL T I ++CGS H AL+
Sbjct: 3073 DG-----KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSS 3125
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGP--RVIKGYAKFLDEAPELEKITQVSCG--EYHSA 241
G L WG EYG+LG G L+ +V+ G+ ++ QV+CG + +
Sbjct: 3126 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-----------RVIQVACGSRDAQTL 3174
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A+++ G V++WG G G+LG + + +P+ + L+G + + CG S ALT
Sbjct: 3175 ALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTKS 3231
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLV 359
G ++ WG +LG G SD + R ++ G ++V A G H L
Sbjct: 3232 GVVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3279
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
G+++ WG N +GQ N +T P+ V G+ + ++A G HS
Sbjct: 3280 VTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3330
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 134/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3076 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 3127
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 3128 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 3180
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 3181 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3237
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV++ G+VY
Sbjct: 3238 GKGDYFRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDAGQVYA 3288
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3289 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3334
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 3015 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQI-----TALSSYVVKKVAVHSGGRHATA 3069
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+
Sbjct: 3070 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------ 3123
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 3124 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3177
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 3178 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 3228
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH S K P+ V L G I VA G +H A+T G
Sbjct: 3229 TKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDAGQ 3285
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 3286 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3332
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 144/327 (44%), Gaps = 50/327 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +D+A G H+A V + G
Sbjct: 4070 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRGIEV--VDVAAGGAHSACVTAAGD 4121
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG E + P+ V+ LQ V ++CG+ + +D T+
Sbjct: 4122 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLC--LTDDDTV--- 4176
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 4177 --WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4234
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 4235 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4285
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G + VACG H+ AW S+
Sbjct: 4286 NDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAWSTSKPAS 4333
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPIL 341
G P + +P E + + + IPI+
Sbjct: 4334 AGKLP-----AQVPMEYN-HLQEIPII 4354
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 129/276 (46%), Gaps = 25/276 (9%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N + P+L G + N + H +AL+ G + +WG + G+LG G
Sbjct: 472 RVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG 531
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P+VI ++ + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 532 DTVP-LEEPKVISAFSG----KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 586
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + E +P V L G+ + DVACG + A+T G +++WG G+LG G
Sbjct: 587 ---GSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 643
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D V V CG ++ +DG+++ WG +
Sbjct: 644 DGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 691
Query: 379 NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ + YP ++ G +V +AAG H L +
Sbjct: 692 HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 173/411 (42%), Gaps = 76/411 (18%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P C A A R + + G + AV +DG
Sbjct: 3964 IYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALATLRPVQLIGGEQTLFAVTADG 4014
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 4015 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE------- 4067
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG+ + PR+ + V+ G H ++ G L
Sbjct: 4068 ---GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAGDL 4122
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSEN 246
WG YG+LG + + L+ P+++ EA + + V+C G+ + ++++
Sbjct: 4123 YTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHHVVDVACGSGDAQTLCLTDD 4173
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4174 DTVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 4230
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTL 358
WG +LG G SD + R P VQ +A G H +
Sbjct: 4231 WGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCV 4272
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
DG ++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4273 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4323
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 122/253 (48%), Gaps = 30/253 (11%)
Query: 134 ENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N +GS + + QV+ GS + A++
Sbjct: 2960 ESAATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3018
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + A G G+LG GI+ + PR I + ++ K V G H+ A++
Sbjct: 3019 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYV------VKKVAVHSGGRHATALTV 3072
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS ALTS G LY
Sbjct: 3073 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELY 3129
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRD 363
WG + G+LG G T + + +L+ +Q VACG + TL +
Sbjct: 3130 TWGLGEYGRLGHGDNTTQLKP---------KMVKVLLGHRVIQ-VACGSRDAQTLALTDE 3179
Query: 364 GRIHGWGYNSYGQ 376
G + WG +G+
Sbjct: 3180 GLVFSWGDGDFGK 3192
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 133/311 (42%), Gaps = 55/311 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHC 125
+ G +H A++S+G +++WG E G+LG G P ++ L+ E V + GAH
Sbjct: 4054 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4113
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSC 174
A L+ WG+ + + RL P + + V+C
Sbjct: 4114 ACVTA----------AGDLYTWGKGR---YGRLGHSDSEDQLKPKLVEALQGHHVVDVAC 4160
Query: 175 GS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
GS + L++ + +WG +YG+LGRG +G + P I + +
Sbjct: 4161 GSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVK 4211
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
V CG S A++++G VYTWG G +LGH S D PR+V L G + +A G
Sbjct: 4212 VECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGS 4268
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQL 349
+H T G +Y WG + GQLG G T P LV V
Sbjct: 4269 LHCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNR 4315
Query: 350 VACGHSHTLVY 360
VACG +HTL +
Sbjct: 4316 VACGSAHTLAW 4326
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 45/285 (15%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+L A N + H A+A+ G +++WG + G+LG G + P+ +
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVI 542
Query: 109 KQLQ----SEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT 164
+ V I+CG+ +AAI E L+ WG+ N+ RL G+
Sbjct: 543 SAFSGKQAGKHVVHIACGSTYSAAITAEGE---------LYTWGRG---NYGRLGHGSSE 590
Query: 165 PNTI-----------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
I + V+CGS +A++E G + +WG +YG+LGRG +G + P
Sbjct: 591 DEAIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTP 649
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
++I+ + +V CG S A++++G+VY+WG G +LGH G +E
Sbjct: 650 KLIEKLQDL--------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH-----GTEE 696
Query: 272 LL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ P+ + L G + DVA G H ALT +++WG + Q
Sbjct: 697 HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 136/293 (46%), Gaps = 33/293 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG G+ G G L PK + G AG + + IACG ++AA
Sbjct: 511 LAATGEVYSWGCGDGGRLGH-GDTVPLEEPKVIS-AFSGKQAGKHV--VHIACGSTYSAA 566
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E P V L+ V ++CG+ +A
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTLA------ 620
Query: 137 GTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
++W WG R G TP I + +V CGS +AL++ G +
Sbjct: 621 -VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQV 679
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG + +LG G T E ++ P++++G + +K+ V+ G H A++E+ E
Sbjct: 680 YSWGKGDNQRLGHG-TEEHVRYPKLLEGL--------QGKKVIDVAAGSTHCLALTEDSE 730
Query: 249 VYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
V++W GS Q H +L+ E P + LD I +ACG S A +S
Sbjct: 731 VHSW--GSNDQCQHFDTLRVTKPE--PAALPGLDTKHIVGIACGPAQSFAWSS 779
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 139/340 (40%), Gaps = 63/340 (18%)
Query: 56 CPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
C AN IAC + ++ +G ++T N P+ V+ L S
Sbjct: 446 CEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRN 495
Query: 116 VKSISCGA--HCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAF 163
+ I+ + H A+A +T ++ WG G P++ AF
Sbjct: 496 IVKIAAHSDGHHYLALA---------ATGEVYSWGCGDGGRLGHGDTVPLEEPKVI-SAF 545
Query: 164 TPNTI---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF 220
+ + ++CGS + A++ G L WG YG+LG G + E P ++ G
Sbjct: 546 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-SSEDEAIPVLVAGLKGL 604
Query: 221 LDEAPELEKITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
K+ V+CG + + AV+ENG+V++WG G G+LG D P+ +
Sbjct: 605 --------KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR---GGSDGCKTPKLIE 653
Query: 279 ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
L + + V CG S ALT G +Y+WG +LG G ++ + R
Sbjct: 654 KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG------------TEEHVRYP 701
Query: 339 PILVVPNGVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+L G ++ VA G +H L D +H WG N Q
Sbjct: 702 KLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 110/281 (39%), Gaps = 69/281 (24%)
Query: 186 GLLQAWGYNEYGQLGRGI---------TCEGLQGPRVIK--------------------G 216
G + WG+N GQLG GI CE L R ++ G
Sbjct: 3962 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4020
Query: 217 Y----------AKFLDEAPELEKITQ-------VSCGEYHSAAVSENGEVYTWGLGSVGQ 259
Y + + LE I V+ G H A+S GEVY+WG G+
Sbjct: 4021 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4080
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LGH + D+ PR + +L GI + DVA GG HS +T+ G LY WG + G+LG
Sbjct: 4081 LGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG--- 4134
Query: 320 QTRSFSLIPNESDTYFRNIPILVVP---NGVQLVAC--GHSHTLVYMRDGRIHGWGYNSY 374
SD+ + P LV + V VAC G + TL D + WG Y
Sbjct: 4135 ----------HSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDY 4184
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADA 414
G+ S P +D G V K+ G S L +
Sbjct: 4185 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4225
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG + G G + +R P+Q+ + + IA G H DG
Sbjct: 4227 AVYTWGKGDYHRLGH-GSDDHVRRPRQVQ-------GLQGKKVIAIATGSLHCVCCTEDG 4278
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
++TWG N+ GQLGDGT + P V LQ + V ++CG+ T A
Sbjct: 4279 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4325
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 74/186 (39%), Gaps = 22/186 (11%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+TQ++C E +S NG VYT S L P+ V L I +A
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------------DTLAPQLVQGLASRNIVKIA 500
Query: 290 C--GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
G H AL + G +Y+WG G+LG G +P E V
Sbjct: 501 AHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPLEEPKVISAFSGKQAGKHV 554
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGG 406
+ACG +++ +G ++ WG +YG+ + S P V G +V +A G G
Sbjct: 555 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSG 614
Query: 407 HSAVLA 412
+ LA
Sbjct: 615 DAQTLA 620
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 82/218 (37%), Gaps = 62/218 (28%)
Query: 246 NGEVYTWGLGSVGQLG--------------------HCSLQSGDKELL------------ 273
+G +Y WG GQLG L G++ L
Sbjct: 3961 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4020
Query: 274 -----------------PRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWGGSQAGQ 314
P + ++ +FIK VA GG H AL+S+G +Y+WG ++ G+
Sbjct: 4021 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4080
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LG G RS P ++ R I ++ VA G +H+ G ++ WG Y
Sbjct: 4081 LGHG--NRSPCDRPRVIES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRY 4130
Query: 375 GQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
G+ + S P V+ G V +A G G + L
Sbjct: 4131 GRLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTL 4168
>gi|125972780|ref|YP_001036690.1| dockerin type I cellulosome protein [Clostridium thermocellum ATCC
27405]
gi|256004969|ref|ZP_05429941.1| cellulosome protein dockerin type I [Clostridium thermocellum DSM
2360]
gi|281416977|ref|ZP_06247997.1| Dockerin type 1 [Clostridium thermocellum JW20]
gi|385779304|ref|YP_005688469.1| Dockerin type 1 [Clostridium thermocellum DSM 1313]
gi|419721626|ref|ZP_14248784.1| Dockerin type 1 protein [Clostridium thermocellum AD2]
gi|419725441|ref|ZP_14252484.1| Dockerin type 1 protein [Clostridium thermocellum YS]
gi|125713005|gb|ABN51497.1| Dockerin type 1 [Clostridium thermocellum ATCC 27405]
gi|255991038|gb|EEU01148.1| cellulosome protein dockerin type I [Clostridium thermocellum DSM
2360]
gi|281408379|gb|EFB38637.1| Dockerin type 1 [Clostridium thermocellum JW20]
gi|316940984|gb|ADU75018.1| Dockerin type 1 [Clostridium thermocellum DSM 1313]
gi|380771190|gb|EIC05067.1| Dockerin type 1 protein [Clostridium thermocellum YS]
gi|380782322|gb|EIC11962.1| Dockerin type 1 protein [Clostridium thermocellum AD2]
Length = 469
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 157/362 (43%), Gaps = 47/362 (12%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++V G N GQ G + P + +G S +A G EHT A+ DG
Sbjct: 129 TVWVLGNNGKGQLGLP------EVSAVNEPVMINGLSGIKS----VAAGREHTLALQEDG 178
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR--ENDGTI 139
TL+ WG N QL + E E+ + + V++ S + A + +NDGT+
Sbjct: 179 TLWAWGNNYSLQLIEYMERDPDTKERFTSIPIK-VETHSDIKYVAAKFSRTLIVKNDGTV 237
Query: 140 STSRLWVWGQ---NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
W++ N S+ + W I G+ H+VAL E G + WG N +
Sbjct: 238 -----WLYSLPPINTSSDAEYMPW-EIKGFGDIKMADIGTGHIVALREDGTVWTWGENVW 291
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFL-DEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
GQLG G Q I Y F ++A L I ++ G+ HS A+ +G V+TWG
Sbjct: 292 GQLGNG-----WQQHHNIHTYIYFEPNQAKNLSDIVSIAAGDAHSVALKSDGTVWTWGSN 346
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
G+LG+ + L P++V L+ I D G H+ AL + G ++ WG + GQL
Sbjct: 347 FNGELGNGTTTY---ILEPKKVEGLEDIVAIDAGIG--HTVALKADGTVWVWGKNSYGQL 401
Query: 316 GLGPQTRSFSLIPNESDTYFRNIPILVV-PNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
G G RS +PI V G+ + G T+ Y DG + WG N +
Sbjct: 402 GNGTTMRS-------------TVPIQVEGLEGIVAIQAGMECTIAYKNDGTVWAWGKNDF 448
Query: 375 GQ 376
GQ
Sbjct: 449 GQ 450
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 138/369 (37%), Gaps = 57/369 (15%)
Query: 39 RERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGT 98
++ L+ ++ P E P + G H+ + DGT++ G N GQLG
Sbjct: 90 KKYMLKAVEKFPGEASNNPDAV----IQFESGFAHSVLLKKDGTVWVLGNNGKGQLGLPE 145
Query: 99 EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRL 158
P + L +KS++ G T A+ E DGT LW WG N
Sbjct: 146 VSAVNEPVMINGLSG--IKSVAAGREHTLALQE----DGT-----LWAWGNNYSLQLIEY 194
Query: 159 F------WGAFTPNTIICQVSCGSVHVVALSECGLL-----QAWGYNEYGQLGRGITCEG 207
FT I + +V A L+ W Y+ + E
Sbjct: 195 MERDPDTKERFTSIPIKVETHSDIKYVAAKFSRTLIVKNDGTVWLYS-LPPINTSSDAEY 253
Query: 208 LQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQS 267
+ P IKG+ I G H A+ E+G V+TWG GQLG+ Q
Sbjct: 254 M--PWEIKGFGD----------IKMADIGTGHIVALREDGTVWTWGENVWGQLGNGWQQH 301
Query: 268 GDKELL----PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRS 323
+ P + L I +A G HS AL S G ++ WG + G+LG G T +
Sbjct: 302 HNIHTYIYFEPNQAKNLSDIV--SIAAGDAHSVALKSDGTVWTWGSNFNGELGNG--TTT 357
Query: 324 FSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKST 383
+ L P + + + + G HT+ DG + WG NSYGQ N +
Sbjct: 358 YILEPKKVEGL----------EDIVAIDAGIGHTVALKADGTVWVWGKNSYGQLGNGTTM 407
Query: 384 YAWYPSPVD 392
+ P V+
Sbjct: 408 RSTVPIQVE 416
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 92/218 (42%), Gaps = 43/218 (19%)
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRK-------HPEKVKQLQSEFVKS 118
DI GH A+ DGT++TWG N +GQLG+G ++ P + K L S+ V
Sbjct: 268 DIGTGH--IVALREDGTVWTWGENVWGQLGNGWQQHHNIHTYIYFEPNQAKNL-SDIVSI 324
Query: 119 ISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-----I 169
+ AH A ++DGT+ W WG N G T P + I
Sbjct: 325 AAGDAHSVAL-----KSDGTV-----WTWGSNFNGELGN---GTTTYILEPKKVEGLEDI 371
Query: 170 CQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK 229
+ G H VAL G + WG N YGQLG G T P ++G LE
Sbjct: 372 VAIDAGIGHTVALKADGTVWVWGKNSYGQLGNGTTMRSTV-PIQVEG----------LEG 420
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQS 267
I + G + A +G V+ WG GQLG + ++
Sbjct: 421 IVAIQAGMECTIAYKNDGTVWAWGKNDFGQLGDGTFEN 458
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 100/201 (49%), Gaps = 31/201 (15%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGAN--SRWLDIACGHEHTAAVAS 79
++ WG N GQ G ++ + ++ P A S + IA G H+ A+ S
Sbjct: 282 TVWTWGENVWGQLGNGWQQHH-----NIHTYIYFEPNQAKNLSDIVSIAAGDAHSVALKS 336
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
DGT++TWG+N G+LG+GT P+KV+ L+ + +I G T A+ + DGT+
Sbjct: 337 DGTVWTWGSNFNGELGNGTTTYILEPKKVEGLED--IVAIDAGIGHTVAL----KADGTV 390
Query: 140 STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSC--GSVHVVALSEC-------GLLQA 190
WVWG+N ++ +L G +T+ QV G V + A EC G + A
Sbjct: 391 -----WVWGKN---SYGQLGNGTTMRSTVPIQVEGLEGIVAIQAGMECTIAYKNDGTVWA 442
Query: 191 WGYNEYGQLGRGITCEGLQGP 211
WG N++GQLG G T E + P
Sbjct: 443 WGKNDFGQLGDG-TFENILRP 462
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 127/327 (38%), Gaps = 60/327 (18%)
Query: 100 EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQN--------- 150
E +P+ V Q +S F S+ + DGT+ WV G N
Sbjct: 103 EASNNPDAVIQFESGFAHSVLL------------KKDGTV-----WVLGNNGKGQLGLPE 145
Query: 151 -QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQ 209
N P + G + I V+ G H +AL E G L AWG N QL + +
Sbjct: 146 VSAVNEPVMINGL----SGIKSVAAGREHTLALQEDGTLWAWGNNYSLQLIEYMERD--- 198
Query: 210 GPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGD 269
P + + + I V+ + V +G V+ + L + S D
Sbjct: 199 -PDTKERFTSIPIKVETHSDIKYVAAKFSRTLIVKNDGTVWLYSLPPINT-------SSD 250
Query: 270 KELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRS-----F 324
E +P + I + D+ G H AL G ++ WG + GQLG G Q
Sbjct: 251 AEYMPWEIKGFGDIKMADIGTG--HIVALREDGTVWTWGENVWGQLGNGWQQHHNIHTYI 308
Query: 325 SLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTY 384
PN++ +N+ +V +A G +H++ DG + WG N G+ N +TY
Sbjct: 309 YFEPNQA----KNLSDIVS------IAAGDAHSVALKSDGTVWTWGSNFNGELGNGTTTY 358
Query: 385 AWYPSPVDWCVGEVRKLAAGGGHSAVL 411
P V+ + ++ + AG GH+ L
Sbjct: 359 ILEPKKVE-GLEDIVAIDAGIGHTVAL 384
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 47/92 (51%), Gaps = 10/92 (10%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++VWG N GQ G G + +P Q+ L G A I G E T A
Sbjct: 384 LKADGTVWVWGKNSYGQLGN-GTTMRSTVPIQVEG-LEGIVA--------IQAGMECTIA 433
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
+DGT++ WG N+FGQLGDGT E P KV
Sbjct: 434 YKNDGTVWAWGKNDFGQLGDGTFENILRPVKV 465
>gi|145593727|ref|YP_001158024.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
gi|145303064|gb|ABP53646.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
Length = 567
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 116/428 (27%), Positives = 163/428 (38%), Gaps = 59/428 (13%)
Query: 1 MDINEIIGETARPVDNIPAKSAI----YVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFG 55
+ + + IG + + P +A+ WG N +GQ G + I LP G
Sbjct: 31 VTVTQAIGVSPALAQHKPGSTAVSEFLLAWGKNDNGQLGNGSTTGSNVPIAVSLP---LG 87
Query: 56 CPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
A +A G H+ A+ S GT+ WG N FGQLGDGT R P +V
Sbjct: 88 TTVTA------VAAGRFHSLALTSAGTVLAWGTNHFGQLGDGTLIDRSAPVEVSLPPGTT 141
Query: 116 VKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQN------QGSNFPRLF-WGAFTPNTI 168
V +++ G + A+ S + WG N GS R A P+ +
Sbjct: 142 VTAVAAGGVHSMALT---------SVGTVLAWGGNGVGQLGDGSTTRRTTPVEAILPSGV 192
Query: 169 -ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL 227
+ V+ H +A++ G AWG N GQLG G T I P
Sbjct: 193 TVTAVAAAESHSLAVTSAGAALAWGLNGTGQLGDGST---------INRSTPVSVALPLG 243
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
++T ++ G HS AV+ G WG GQLG + + P V G +
Sbjct: 244 TEVTAIAAGRLHSLAVTSVGAALAWGYNGTGQLGDGTTINRST---PVSVALPLGAEVTA 300
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
V G +HS ALT+ G AWG + N S+ ++ P G
Sbjct: 301 VVAGRLHSAALTTAGTALAWGDNGF-------GQLGNGGGSNSSEAVEVSL-----PTGT 348
Query: 348 QLVACG---HSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAA 403
L A HT+ DG WG N +GQ + +T P PV G + AA
Sbjct: 349 TLAAIASRDSDHTIAIAGDGTALAWGSNIFGQLGDGTTTNPSTPVPVALPTGITLLTTAA 408
Query: 404 GGGHSAVL 411
G H+ L
Sbjct: 409 GSDHTLAL 416
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 133/288 (46%), Gaps = 35/288 (12%)
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
A+SE L AWG N+ GQLG G T G P + P +T V+ G +HS
Sbjct: 52 AVSE--FLLAWGKNDNGQLGNGSTT-GSNVPIAVS--------LPLGTTVTAVAAGRFHS 100
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
A++ G V WG GQLG +L D+ P V G + VA GGVHS ALTS
Sbjct: 101 LALTSAGTVLAWGTNHFGQLGDGTLI--DRSA-PVEVSLPPGTTVTAVAAGGVHSMALTS 157
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI-LVVPNGVQL--VACGHSHT 357
G + AWGG+ GQLG G TR R P+ ++P+GV + VA SH+
Sbjct: 158 VGTVLAWGGNGVGQLGDGSTTR-------------RTTPVEAILPSGVTVTAVAAAESHS 204
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLADAC 415
L G WG N GQ + + P V +G EV +AAG HS AV +
Sbjct: 205 LAVTSAGAALAWGLNGTGQLGDGSTINRSTPVSVALPLGTEVTAIAAGRLHSLAVTSVGA 264
Query: 416 SLK--ELCEFRLAESVTLSNASEIEDVASRTGSEALARLCERLREHSL 461
+L +L + T++ ++ + VA G+E A + RL +L
Sbjct: 265 ALAWGYNGTGQLGDGTTINRSTPVS-VALPLGAEVTAVVAGRLHSAAL 311
>gi|338723782|ref|XP_001915115.2| PREDICTED: LOW QUALITY PROTEIN: e3 ISG15--protein ligase HERC5
[Equus caballus]
Length = 966
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/258 (32%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I Q++CG H +ALS+ G L AWG N YGQLG G T P++++ L P
Sbjct: 84 IIQITCGDYHSLALSKGGELFAWGQNTYGQLGVGRTFASTPTPQIVEH----LSGVP--- 136
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
+ Q+S GE HS A+S + VY+WG GQLG + D P + ALD ++ +
Sbjct: 137 -LVQISAGEAHSMALSMSRNVYSWGRNDCGQLGLGHTNNKDS---PSLIEALDNQEVEFL 192
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV---VPN 345
ACGG H+ LT G ++ +G + GQLG + P LV V
Sbjct: 193 ACGGSHTALLTKDGLVFTFGAGKCGQLGHNSTQNELT-------------PCLVTELVGK 239
Query: 346 GVQLVACGHSHTLVYMRD-GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRK---- 400
V +ACG HTL Y+ D G++ +G GQ N + + P P+ E K
Sbjct: 240 RVTQIACGRRHTLAYVSDLGKVFSFGSGEGGQLGNGATHHQLIPLPMKLPSNEELKFESH 299
Query: 401 -------LAAGGGHSAVL 411
+ AGG S +L
Sbjct: 300 TSEKELIMIAGGNQSILL 317
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 92/185 (49%), Gaps = 19/185 (10%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+ I Q++CG+YHS A+S+ GE++ WG + GQLG + P+ V L G+ +
Sbjct: 82 KNIIQITCGDYHSLALSKGGELFAWGQNTYGQLGVGRTFASTPT--PQIVEHLSGVPLVQ 139
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP--- 344
++ G HS AL+ +Y+WG + GQLGLG N D+ P L+
Sbjct: 140 ISAGEAHSMALSMSRNVYSWGRNDCGQLGLGHT--------NNKDS-----PSLIEALDN 186
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAA 403
V+ +ACG SHT + +DG + +G GQ + + P V VG+ V ++A
Sbjct: 187 QEVEFLACGGSHTALLTKDGLVFTFGAGKCGQLGHNSTQNELTPCLVTELVGKRVTQIAC 246
Query: 404 GGGHS 408
G H+
Sbjct: 247 GRRHT 251
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDG-TEEGRKHPEKVKQLQSEFVKSISCGA 123
+ I CG H+ A++ G LF WG N +GQLG G T P+ V+ L + IS G
Sbjct: 85 IQITCGDYHSLALSKGGELFAWGQNTYGQLGVGRTFASTPTPQIVEHLSGVPLVQISAGE 144
Query: 124 HCTAAIAEPRENDGTISTSRLWVWGQN----------QGSNFPRLFWGAFTPNTIICQVS 173
+ A++ R ++ WG+N + P L N + ++
Sbjct: 145 AHSMALSMSR---------NVYSWGRNDCGQLGLGHTNNKDSPSLIEAL--DNQEVEFLA 193
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
CG H L++ GL+ +G + GQLG T L V + K ++TQ+
Sbjct: 194 CGGSHTALLTKDGLVFTFGAGKCGQLGHNSTQNELTPCLVTELVGK---------RVTQI 244
Query: 234 SCGEYHSAA-VSENGEVYTWGLGSVGQLGH 262
+CG H+ A VS+ G+V+++G G GQLG+
Sbjct: 245 ACGRRHTLAYVSDLGKVFSFGSGEGGQLGN 274
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 29/193 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G GR Q+ L G P + I+ G H+ A++
Sbjct: 103 LFAWGQNTYGQLG-VGRTFASTPTPQIVEHLSGVPL------VQISAGEAHSMALSMSRN 155
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST- 141
+++WG N+ GQLG G + P ++ L ++ V+ ++CG TA + + DG + T
Sbjct: 156 VYSWGRNDCGQLGLGHTNNKDSPSLIEALDNQEVEFLACGGSHTALLTK----DGLVFTF 211
Query: 142 --SRLWVWGQNQGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVA-LSECGLLQAW 191
+ G N N TP + + Q++CG H +A +S+ G + ++
Sbjct: 212 GAGKCGQLGHNSTQN-------ELTPCLVTELVGKRVTQIACGRRHTLAYVSDLGKVFSF 264
Query: 192 GYNEYGQLGRGIT 204
G E GQLG G T
Sbjct: 265 GSGEGGQLGNGAT 277
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD-G 81
++ +G GQ G + +L L EL G R IACG HT A SD G
Sbjct: 208 VFTFGAGKCGQLGHNSTQNEL--TPCLVTELVG------KRVTQIACGRRHTLAYVSDLG 259
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVK 117
+F++G+ E GQLG+G + P +K +E +K
Sbjct: 260 KVFSFGSGEGGQLGNGATHHQLIPLPMKLPSNEELK 295
>gi|426344974|ref|XP_004039178.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Gorilla
gorilla gorilla]
Length = 982
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 122/242 (50%), Gaps = 19/242 (7%)
Query: 168 IICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL 227
I+ VSCG H +A+ G + AWG GQLG G E P+ I
Sbjct: 76 IVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGI------- 128
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
KI QVSCG YHS A+S++ +V++WG S GQLG + + P+RV +L+GI +
Sbjct: 129 -KIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQ 185
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN-G 346
VA GG HS AL+ G + WG + AGQL L + +P +S+ + + I + N G
Sbjct: 186 VAAGGTHSFALSLCGTSFGWGSNSAGQLALSGRN-----VPAQSN---KPLSIGALKNLG 237
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGG 406
V ++CG HT V +DG++ +G N GQ + P V+ G V ++ G
Sbjct: 238 VVYISCGDEHTAVLTQDGKVFTFGDNCSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSY 297
Query: 407 HS 408
H+
Sbjct: 298 HT 299
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 144/322 (44%), Gaps = 48/322 (14%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
L A G H+ + ++ + + G N GQLG + + PE ++ L++ V +SCG
Sbjct: 26 LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKE 85
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQ-NQGS----NFPRLFWGAFTPNTI-------ICQV 172
+ A+ R++ WG ++G F + +FTP I I QV
Sbjct: 86 HSLAVCH---------KGRVFAWGAGSEGQLGIGEFKEI---SFTPKKITTLNGIKIIQV 133
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
SCG H +ALS+ + +WG N +GQLG G P+ ++ L+ P + Q
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRS----LEGIP----LAQ 185
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
V+ G HS A+S G + WG S GQL + P + AL + + ++CG
Sbjct: 186 VAAGGTHSFALSLCGTSFGWGSNSAGQLALSGRNVPAQSNKPLSIGALKNLGVVYISCGD 245
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLV 350
H+ LT G ++ +G + +GQLG P T + P LV + V +
Sbjct: 246 EHTAVLTQDGKVFTFGDNCSGQLGYSP-------------TPEKRGPQLVERIDGLVSQI 292
Query: 351 ACGHSHTLVYMR-DGRIHGWGY 371
CG HTL Y+ G++ +G+
Sbjct: 293 DCGSYHTLAYVHTTGQVVSFGH 314
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 151/350 (43%), Gaps = 63/350 (18%)
Query: 27 GYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLD-IACGHEHTAAVASDGTLFT 85
G N GQ GR+G +R +LP + + +D ++CG EH+ AV G +F
Sbjct: 48 GDNSRGQLGRRGAQR-----GELPEPI----QALETLIVDLVSCGKEHSLAVCHKGRVFA 98
Query: 86 WGANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRL 144
WGA GQLG G +E P+K+ L + +SCG + + A+++ S++
Sbjct: 99 WGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK---------DSQV 149
Query: 145 WVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+ WG+N G FP +P + + QV+ G H ALS CG W
Sbjct: 150 FSWGKNSHGQLGLGKEFP----SQASPQRVRSLEGIPLAQVAAGGTHSFALSLCGTSFGW 205
Query: 192 GYNEYGQL---GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
G N GQL GR + + P I G K L + +SCG+ H+A ++++G+
Sbjct: 206 GSNSAGQLALSGRNVPAQS-NKPLSI-GALKNLG-------VVYISCGDEHTAVLTQDGK 256
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
V+T+G GQLG+ ++ P+ V +DG+ + + CG H+ A Y
Sbjct: 257 VFTFGDNCSGQLGY---SPTPEKRGPQLVERIDGL-VSQIDCGSYHTLA-------YVHT 305
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 358
Q G GP S P + N I + + LV H
Sbjct: 306 TGQVVSFGHGPSDTS---KPTHPEALTENFDISCLISAEDLVDVQVKHIF 352
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 118/242 (48%), Gaps = 25/242 (10%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG GQ G G +++ + L G + + ++CGH H+ A++
Sbjct: 93 KGRVFAWGAGSEGQLG-IGEFKEISFTPKKITTLNGI------KIIQVSCGHYHSLALSK 145
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND-- 136
D +F+WG N GQLG G E + P++V+ L+ + ++ G + A++ +
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGTHSFALSLCGTSFGW 205
Query: 137 GTISTSRLWVWGQN--QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
G+ S +L + G+N SN P L GA N + +SCG H L++ G + +G N
Sbjct: 206 GSNSAGQLALSGRNVPAQSNKP-LSIGALK-NLGVVYISCGDEHTAVLTQDGKVFTFGDN 263
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEVYTWG 253
GQLG T E +GP++++ ++Q+ CG YH+ A V G+V ++G
Sbjct: 264 CSGQLGYSPTPEK-RGPQLVERIDGL---------VSQIDCGSYHTLAYVHTTGQVVSFG 313
Query: 254 LG 255
G
Sbjct: 314 HG 315
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 60/145 (41%), Gaps = 12/145 (8%)
Query: 270 KELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPN 329
+EL RR G + A G HS L + + + G + GQLG R
Sbjct: 10 RELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQR------G 63
Query: 330 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ-AANEKSTYAWYP 388
E + + L+ V LV+CG H+L GR+ WG S GQ E ++ P
Sbjct: 64 ELPEPIQALETLI----VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTP 119
Query: 389 SPVDWCVG-EVRKLAAGGGHSAVLA 412
+ G ++ +++ G HS L+
Sbjct: 120 KKITTLNGIKIIQVSCGHYHSLALS 144
>gi|52353612|gb|AAU44178.1| ptative chromosome condensation factor [Oryza sativa Japonica
Group]
Length = 917
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 116/419 (27%), Positives = 173/419 (41%), Gaps = 51/419 (12%)
Query: 15 DNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL----DIACG 70
D+ + +YVWG + R G + +R ++ F P SR + + CG
Sbjct: 29 DDCDSLGDVYVWGEVFCENSVRVGSDTIIRSTEKTD---FLLPKPLESRLVLDVYHVDCG 85
Query: 71 HEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIA 130
H A V +G +FTWG + G+LG GT E HP V+ L + V ++CG T A+
Sbjct: 86 VRHAALVTRNGDVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVACGEFHTCAVT 145
Query: 131 EPRE----NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
E DGT + L G + G P+ GA + VSCG+ H ++ G
Sbjct: 146 TTGELYTWGDGTHNVG-LLGHGTDAGHWIPKRISGAL-DGLPVAYVSCGTWHTALITSMG 203
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE- 245
L +G +G LG G + P+ ++ + K V+CG +H+AA+ E
Sbjct: 204 QLFTFGDGSFGVLGHG-NLTSISCPKEVESLSGL--------KTIAVACGVWHTAAIVEV 254
Query: 246 ----------NGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGV 293
G+++TWG G +LGH GDKE L P V +L VACG
Sbjct: 255 IVTHSSSSVSAGKLFTWGDGDKHRLGH-----GDKESRLKPTCVASLIDYDFYRVACGHS 309
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG 353
+ LT+ G + + G S GQLG PN + + V VACG
Sbjct: 310 LTVCLTTSGKVLSMGNSVYGQLG----------NPNSDGRLPCLVEDRIAGEHVLQVACG 359
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 411
H V + WG + G+ + P+ V+ VR +A G +A +
Sbjct: 360 SYHVAVLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACGANFTAAI 418
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 131/313 (41%), Gaps = 69/313 (22%)
Query: 45 IPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKH 104
IPK++ L G P ++CG HTA + S G LFT+G FG LG G
Sbjct: 173 IPKRISGALDGLPVAY------VSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISC 226
Query: 105 PEKVKQLQSEFVKSISCGAHCTAAIAEP--RENDGTISTSRLWVWGQN------QGSNFP 156
P++V+ L +++CG TAAI E + ++S +L+ WG G
Sbjct: 227 PKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKES 286
Query: 157 RL--FWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVI 214
RL A + +V+CG V L+ G + + G + YGQLG P
Sbjct: 287 RLKPTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLG---------NPNSD 337
Query: 215 KGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLP 274
+++ E + QV+CG YH A ++ EV+TWG G+ G+LGH ++ D+++ P
Sbjct: 338 GRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEVFTWGKGANGRLGHGDIE--DRKV-P 394
Query: 275 RRVVALDGIFIKDVACGG-----------------------------------------V 293
+V AL ++ +ACG V
Sbjct: 395 TQVEALKDRAVRHIACGANFTAAICLHKWVSGADQSQCSSCQQPFGFTRKRHNCYNCGLV 454
Query: 294 HSCALTSKGALYA 306
H A TS+ AL A
Sbjct: 455 HCNACTSRKALRA 467
>gi|449456530|ref|XP_004146002.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
Length = 463
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 161/362 (44%), Gaps = 55/362 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIAC---GHEHTAAVAS 79
+++WG G+ G G E + +P NSR + C G H+ A+ +
Sbjct: 139 VWIWGKGDGGRLGF-GHENPVFVPT------------LNSRLESVRCIALGGLHSVALNA 185
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
G +FTWG FG LG P V+ +K I+ TAAI E E
Sbjct: 186 LGQVFTWGYGGFGALGHSVYHRELVPRLVEGSWRGRIKHIATSGAHTAAITESGE----- 240
Query: 140 STSRLWVWGQNQGSNFPRLFW--------GAFTPNTI------ICQVSCGSVHVVALSEC 185
++ WG+++G L G P + + VSCG +AL
Sbjct: 241 ----VYTWGRDEGDGRLGLGPGRGPNEGGGLSIPCRVRALPAPVAAVSCGGFFTMALGVD 296
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G L WG N +LGRG G + P+ + L++ P I Q+ CG YHS ++
Sbjct: 297 GKLWNWGANTNFELGRGNNIGGWE-PKPVPS----LEDTP----IIQIVCGGYHSLVLTG 347
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V +WG G GQLGH S+Q+ E +PR + AL + +AC G S A+T++G LY
Sbjct: 348 DGKVLSWGYGGHGQLGHSSIQN---EKVPRVIDALADKRVIYIACCGSSSAAVTAEGKLY 404
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTL-VYMRDG 364
WG ++ QLG+ P P E F + P V VA G SH + + +R G
Sbjct: 405 MWGNAKDSQLGV-PGLPEVQTSPVE--VIFLTEDDGLGPYHVLSVAVGASHAMCLVLRRG 461
Query: 365 RI 366
R+
Sbjct: 462 RM 463
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 152/352 (43%), Gaps = 53/352 (15%)
Query: 71 HEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIA 130
H + A + L +WG GQLG G EE R +P V L + +++ + +
Sbjct: 49 HSNNAGTTAILQLLSWGRGSSGQLGGGIEEIRLYPSPVANLSVPNIHNLALAPGQLPSFS 108
Query: 131 EPRENDG-----------------TISTSRLWVWGQNQGSNFPRLFWG----AFTP--NT 167
++ G + ++W+WG+ G RL +G F P N+
Sbjct: 109 GDNQDSGDDGSFELGISCGLFHSSLLVNGKVWIWGKGDGG---RLGFGHENPVFVPTLNS 165
Query: 168 IICQVSC---GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
+ V C G +H VAL+ G + WGY +G LG + L PR+++G +
Sbjct: 166 RLESVRCIALGGLHSVALNALGQVFTWGYGGFGALGHSVYHRELV-PRLVEGSWR----- 219
Query: 225 PELEKITQVSCGEYHSAAVSENGEVYTWGL----GSVGQLGHCSLQSGDKELLPRRVVAL 280
+I ++ H+AA++E+GEVYTWG G +G G +P RV AL
Sbjct: 220 ---GRIKHIATSGAHTAAITESGEVYTWGRDEGDGRLGLGPGRGPNEGGGLSIPCRVRAL 276
Query: 281 DGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI 340
+ V+CGG + AL G L+ WG + +LG G + P S + PI
Sbjct: 277 PAP-VAAVSCGGFFTMALGVDGKLWNWGANTNFELGRGNNIGGWEPKPVPS---LEDTPI 332
Query: 341 LVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVD 392
+Q+V CG H+LV DG++ WGY +GQ + P +D
Sbjct: 333 ------IQIV-CGGYHSLVLTGDGKVLSWGYGGHGQLGHSSIQNEKVPRVID 377
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 134/313 (42%), Gaps = 68/313 (21%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A ++ WGY G G R+L +P+ + G R IA HTAA+
Sbjct: 185 ALGQVFTWGYGGFGALGHSVYHREL-VPRLVEGSWRG-------RIKHIATSGAHTAAIT 236
Query: 79 SDGTLFTWGANEFGQLGDGTEE-----------GRKHPEKVKQLQSEFVKSISCGAHCTA 127
G ++TWG +E GDG G P +V+ L + V ++SCG T
Sbjct: 237 ESGEVYTWGRDE----GDGRLGLGPGRGPNEGGGLSIPCRVRALPAP-VAAVSCGGFFTM 291
Query: 128 AIAEPRENDGTISTSRLWVWGQN------QGSNFPRLFWGAFTP-------NTIICQVSC 174
A+ DG +LW WG N +G+N G + P +T I Q+ C
Sbjct: 292 ALGV----DG-----KLWNWGANTNFELGRGNNI-----GGWEPKPVPSLEDTPIIQIVC 337
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G H + L+ G + +WGY +GQLG + + + PRVI A +++ ++
Sbjct: 338 GGYHSLVLTGDGKVLSWGYGGHGQLGHS-SIQNEKVPRVIDALAD--------KRVIYIA 388
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL---DGI---FIKDV 288
C SAAV+ G++Y WG QLG L + + P V+ L DG+ + V
Sbjct: 389 CCGSSSAAVTAEGKLYMWGNAKDSQLGVPGLP--EVQTSPVEVIFLTEDDGLGPYHVLSV 446
Query: 289 ACGGVHSCALTSK 301
A G H+ L +
Sbjct: 447 AVGASHAMCLVLR 459
>gi|348527836|ref|XP_003451425.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Oreochromis niloticus]
Length = 4833
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 148/336 (44%), Gaps = 50/336 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +DIA G H+A + + G
Sbjct: 4059 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRGVEV--VDIAAGGAHSACITASGE 4110
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFTWG +G+LG G E + P+ V LQ V ++CG+ + ++
Sbjct: 4111 LFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDD------- 4163
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
+W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 4164 MVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4223
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 4224 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4274
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G I VACG H+ AW S+
Sbjct: 4275 NDEGQLGDGTTNAIQR---PRLVAALQGKKINRVACGSAHT---------LAWSTSKPTN 4322
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
G P + +P E + + + IPI+ + N + L+
Sbjct: 4323 AGKLP-----AQVPMEYN-HLQEIPIMALRNRLVLL 4352
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 134/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3065 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAAITSSGE 3116
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L++WG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 3117 LYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEG------- 3169
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 3170 FVFSWGDG---DFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3226
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P++++G +KI V+ G H AV++ G+VY
Sbjct: 3227 GKGDYFRLGHGTDVH-VRKPQMVEGLRG--------KKIVHVAVGALHCLAVTDTGQVYA 3277
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3278 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3323
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 164/357 (45%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + IY G +G+ G + IP+Q+ + + + + G H A
Sbjct: 3004 VTVEGKIYACGEATNGRLGLGLSSGTIPIPRQI-----TALSNYVIKKVAVHSGGRHAMA 3058
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AAI
Sbjct: 3059 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT------ 3112
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 3113 ---SSGELYSWGLGE---YGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALT 3166
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ G + +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 3167 DEGFVFSWGDGDFGKLGRG-GSEGCNVPQNI--------ERLNGQGVCQIECGAQFSLAL 3217
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH + K P+ V L G I VA G +H A+T G
Sbjct: 3218 TKSGVVWTWGKGDYFRLGHGTDVHVRK---PQMVEGLRGKKIVHVAVGALHCLAVTDTGQ 3274
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 3275 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3321
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 176/411 (42%), Gaps = 67/411 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
++ ++VWG N Q G L+ K P + N + +A G + AV
Sbjct: 2955 RTKVFVWGLNDKDQLG------GLKGSKIKVPSFSETLSALNV--VQVAGGSKSLFAVTV 3006
Query: 80 DGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPREN 135
+G ++ G G+LG G G P ++ L + +K ++ G H A
Sbjct: 3007 EGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVIKKVAVHSGGRHAMALTV----- 3061
Query: 136 DGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
DG +++ WG+ PRL T I ++CGS H A++
Sbjct: 3062 DG-----KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAAITSS 3114
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGP--RVIKGYAKFLDEAPELEKITQVSCG--EYHSA 241
G L +WG EYG+LG G L+ +V+ G+ ++ QV+CG + +
Sbjct: 3115 GELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGH-----------RVIQVACGSRDAQTL 3163
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A+++ G V++WG G G+LG + + +P+ + L+G + + CG S ALT
Sbjct: 3164 ALTDEGFVFSWGDGDFGKLGRGGSEGCN---VPQNIERLNGQGVCQIECGAQFSLALTKS 3220
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLV 359
G ++ WG +LG G +D + R ++ G ++V A G H L
Sbjct: 3221 GVVWTWGKGDYFRLGHG------------TDVHVRKPQMVEGLRGKKIVHVAVGALHCLA 3268
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
G+++ WG N +GQ N +T P+ V G+ + ++A G HS
Sbjct: 3269 VTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3319
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 139/314 (44%), Gaps = 53/314 (16%)
Query: 63 RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG 122
R + + G +H A++S+G +++WG E G+LG G P ++ L+ V I+ G
Sbjct: 4039 RKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAG 4098
Query: 123 AHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQ 171
+A I ++ L+ WG+ + + RL G P + +
Sbjct: 4099 GAHSACIT---------ASGELFTWGKGR---YGRLGHGDSEDQLKPKLVDALQGHRVID 4146
Query: 172 VSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK 229
V+CGS + L++ ++ +WG +YG+LGRG +G + P I
Sbjct: 4147 VACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG-GSDGCKIPMKIDSLTGL--------G 4197
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ +V CG S A++++G VYTWG G +LGH S D PR+V L G + +A
Sbjct: 4198 VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIA 4254
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NG 346
G +H T G +Y WG + GQLG G T P LV
Sbjct: 4255 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKK 4301
Query: 347 VQLVACGHSHTLVY 360
+ VACG +HTL +
Sbjct: 4302 INRVACGSAHTLAW 4315
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 129/260 (49%), Gaps = 41/260 (15%)
Query: 72 EHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQ----SEFVKSISCGAHCTA 127
+H A++S+G +F+WG + G+LG G + P+ + + V ++CG+ +A
Sbjct: 496 QHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPKMIGTFNGKQAGKHVVHVACGSTYSA 555
Query: 128 AIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGA----FTPNTI-------ICQVSCGS 176
AI DG L+ WG+ N+ RL G+ TP + + V+CGS
Sbjct: 556 AITA----DG-----ELYTWGRG---NYGRLGHGSSEDQTTPMVVTAFKGLKVVDVACGS 603
Query: 177 --VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
+A++E G + +WG +YG+LGRG +G + P++++ I +V
Sbjct: 604 GDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLVEKLQDL--------DIVKVC 654
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVH 294
CG S A++++G+VYTWG G +LGH + + P+ + +L G + DVA G H
Sbjct: 655 CGSQFSVALTKDGQVYTWGKGDNQRLGH---GTDEHVRYPKLLDSLQGKKVVDVAVGSTH 711
Query: 295 SCALTSKGALYAWGGSQAGQ 314
ALT G + +WG + Q
Sbjct: 712 CLALTDDGEVLSWGSNDKLQ 731
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 174/412 (42%), Gaps = 76/412 (18%)
Query: 22 AIYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
IY WG+NH GQ G G E ++++P A A R + + G + AV +D
Sbjct: 3952 TIYGWGHNHRGQLG--GIEGAKVKVPT-------STEALATLRPVQLIGGEQTLFAVTAD 4002
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDG 137
G L+ G G+LG G E P ++ +Q F++ ++ G HC A +E
Sbjct: 4003 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSE------ 4056
Query: 138 TISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
++ WG+ + PR+ + ++ G H ++ G
Sbjct: 4057 ----GEVYSWGEAEDGKLGHGNRSPCDRPRVIES--LRGVEVVDIAAGGAHSACITASGE 4110
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSE 245
L WG YG+LG G + + L+ P+++ +A + ++ V+C G+ + +++
Sbjct: 4111 LFTWGKGRYGRLGHGDSEDQLK-PKLV--------DALQGHRVIDVACGSGDAQTLCLTD 4161
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+ V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4162 DDMVWSWGDGDYGKLGR---GGSDGCKIPMKIDSLTGLGVVKVECGSQFSVALTKSGAVY 4218
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHT 357
WG +LG G SD + R P VQ +A G H
Sbjct: 4219 TWGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHC 4260
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
+ DG ++ WG N GQ + + P V G ++ ++A G H+
Sbjct: 4261 VCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 4312
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 128/253 (50%), Gaps = 30/253 (11%)
Query: 134 ENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N +GS + + QV+ GS + A++
Sbjct: 2949 ESAATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3007
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + A G G+LG G++ + PR I + ++ ++K+ V G H+ A++
Sbjct: 3008 GKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYV-----IKKVA-VHSGGRHAMALTV 3061
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS A+TS G LY
Sbjct: 3062 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAAITSSGELY 3118
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRD 363
+WG + G+LG G T L P + + +L+ +Q VACG + TL +
Sbjct: 3119 SWGLGEYGRLGHGDNTT--QLRP-------KLVKVLLGHRVIQ-VACGSRDAQTLALTDE 3168
Query: 364 GRIHGWGYNSYGQ 376
G + WG +G+
Sbjct: 3169 GFVFSWGDGDFGK 3181
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 116/241 (48%), Gaps = 25/241 (10%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H +ALS G + +WG + G+LG G T L+ P++I + + + + V+CG
Sbjct: 497 HYLALSSNGEVFSWGCGDGGRLGHGDTTY-LEEPKMIGTF----NGKQAGKHVVHVACGS 551
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHS 295
+SAA++ +GE+YTWG G+ G+LGH S + + P V A G+ + DVACG +
Sbjct: 552 TYSAAITADGELYTWGRGNYGRLGH---GSSEDQTTPMVVTAFKGLKVVDVACGSGDAQT 608
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQT--RSFSLIPNESDTYFRNIPILVVPNGVQLVACG 353
A+T G +++WG G+LG G ++ L+ D + V CG
Sbjct: 609 LAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDL------------DIVKVCCG 656
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLA 412
++ +DG+++ WG + + + YP +D G +V +A G H L
Sbjct: 657 SQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVDVAVGSTHCLALT 716
Query: 413 D 413
D
Sbjct: 717 D 717
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 138/305 (45%), Gaps = 46/305 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G G L PK + G AG + + +ACG ++AA+ +DG
Sbjct: 507 VFSWGCGDGGRLGH-GDTTYLEEPKMIG-TFNGKQAGKHV--VHVACGSTYSAAITADGE 562
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG G+ E + P V + V ++CG+ +A
Sbjct: 563 LYTWGRGNYGRLGHGSSEDQTTPMVVTAFKGLKVVDVACGSGDAQTLA-------VTENG 615
Query: 143 RLWVWGQ----------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
++W WG + G P+L + I +V CGS VAL++ G + WG
Sbjct: 616 QVWSWGDGDYGKLGRGGSDGCKTPKLV--EKLQDLDIVKVCCGSQFSVALTKDGQVYTWG 673
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
+ +LG G T E ++ Y K LD + +K+ V+ G H A++++GEV +W
Sbjct: 674 KGDNQRLGHG-TDEHVR-------YPKLLDSL-QGKKVVDVAVGSTHCLALTDDGEVLSW 724
Query: 253 GLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
GS +L H +L S K+ P+ + L+ I ++CG G +AW S
Sbjct: 725 --GSNDKLQHFDTLFSNKKQ--PKALPGLNSKHIVGISCG---------PGQSFAWSSSS 771
Query: 312 AGQLG 316
+G
Sbjct: 772 EWSVG 776
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 139/340 (40%), Gaps = 30/340 (8%)
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEP 132
T + GT++ WG N GQLG K P + L + V+ I A A+
Sbjct: 3944 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTSTEALATLRPVQLIGGEQTLFAVTADG 4003
Query: 133 RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
+ G + + P L V+ G H +ALS G + +WG
Sbjct: 4004 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWG 4063
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
E G+LG G PRVI+ ++ ++ G HSA ++ +GE++TW
Sbjct: 4064 EAEDGKLGHG-NRSPCDRPRVIESLRGV--------EVVDIAAGGAHSACITASGELFTW 4114
Query: 253 GLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWG 308
G G G+LGH GD E L P+ V AL G + DVACG + LT +++WG
Sbjct: 4115 GKGRYGRLGH-----GDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWG 4169
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHG 368
G+LG G IP + D+ + GV V CG ++ + G ++
Sbjct: 4170 DGDYGKLGRG--GSDGCKIPMKIDS--------LTGLGVVKVECGSQFSVALTKSGAVYT 4219
Query: 369 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGH 407
WG Y + + + P V G +V +A G H
Sbjct: 4220 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4259
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 76/192 (39%), Gaps = 34/192 (17%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+TQ+ C E +S +G VY+ S L P + L I +A
Sbjct: 444 VTQIVCSEKGFLILSSSGAVYSQNYKST-------------TLAPMLIHVLSSRKIVKLA 490
Query: 290 C--GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
G H AL+S G +++WG G+LG G TY ++ NG
Sbjct: 491 AHPDGQHYLALSSNGEVFSWGCGDGGRLGHG------------DTTYLEEPKMIGTFNGK 538
Query: 348 QL------VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRK 400
Q VACG +++ DG ++ WG +YG+ + S P V G +V
Sbjct: 539 QAGKHVVHVACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTTPMVVTAFKGLKVVD 598
Query: 401 LAAGGGHSAVLA 412
+A G G + LA
Sbjct: 599 VACGSGDAQTLA 610
>gi|444730943|gb|ELW71312.1| putative E3 ubiquitin-protein ligase HERC1 [Tupaia chinensis]
Length = 4409
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 167/368 (45%), Gaps = 78/368 (21%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPP-------- 51
MD + T+RP D ++ K +Y+WG GQ GR + +P P
Sbjct: 3514 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMVPAAAPSFSQAQQVI 3571
Query: 52 -------------ELFGCPAGANSRW------------------------LDIACGHE-H 73
+ C G+ R L +CG + H
Sbjct: 3572 CGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGH 3631
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
+ A+ G +F+WG ++G+LG G + ++ P +++ LQ E V +SCG +A +
Sbjct: 3632 SMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT--- 3688
Query: 134 ENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG-LLQAWG 192
+DG +L+ +G ++ RL G + + +V+CG H +A+S G ++ A+G
Sbjct: 3689 -SDG-----KLFTFGNG---DYGRLGLGNTSNKKLPERVACGLNHTLAVSADGSMVWAFG 3739
Query: 193 YNEYGQLGRGITC--EGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
+YG+LG G + Q V+ G I +V+CG S A++++G VY
Sbjct: 3740 DGDYGKLGLGNSTAKSSPQKVDVLCGIG-----------IKKVACGTQFSVALTKDGHVY 3788
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
T+G + L ++ ++ P++V L G+ I+DVA G H+ AL S G +YAWG +
Sbjct: 3789 TFGQDRLIGLPEGRARNHNR---PQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSN 3845
Query: 311 QAGQLGLG 318
GQLGLG
Sbjct: 3846 SEGQLGLG 3853
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 181/405 (44%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ PK P + S I G T +++DG+
Sbjct: 372 VYVWGSNSSHQLVEGTQEKILQ-PKLAP---------SFSDAQTIEAGQYCTFVISTDGS 421
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG----T 138
+ G +G+LG G + +K+L E +SI ++ + +DG
Sbjct: 422 VRACGKGSYGRLGLGDSNNQS---TLKKLTFEPHRSIK-------KVSSSKGSDGHTLAF 471
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ ++ WG + +P+L G ++C VS G H A++E G L
Sbjct: 472 TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGEL 530
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G P ++K ++ + +VSCG H+ A+S++G
Sbjct: 531 YTWGEGDFGRLGHG-DSNSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 579
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ + AL G+FI+ V G S ALTS G +Y
Sbjct: 580 TVWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVY 634
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V ++ G SH L D
Sbjct: 635 AWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-ISIGDSHCLALSHDNE 683
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 684 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 728
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV DG
Sbjct: 477 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVTEDGE 529
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 530 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 580
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P I I +V GS +AL+ G + AW
Sbjct: 581 -VWSFG---GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 636
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I +S G+ H A+S + EVY
Sbjct: 637 GCG--ACLGCGSSEATALRPKLIEELAA--------TRIVDISIGDSHCLALSHDNEVYA 686
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDGI I+ ++ G HS A T+
Sbjct: 687 WGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 733
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 139/309 (44%), Gaps = 58/309 (18%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V SDG
Sbjct: 3641 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTSDGK 3692
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V +CG + T A++ DG++
Sbjct: 3693 LFTFGNGDYGRLGLGNTSNKKLPERV-----------ACGLNHTLAVSA----DGSM--- 3734
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNT------IIC-----QVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T + ++C +V+CG+ VAL++ G + +
Sbjct: 3735 -VWAFGDG---DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 3790
Query: 192 GYNEYGQL--GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
G + L GR Q V+ G I V+ G H+ A++ G+V
Sbjct: 3791 GQDRLIGLPEGRARNHNRPQQVPVLAGVV-----------IEDVAVGAEHTLALASTGDV 3839
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWG 308
Y WG S GQLG L + P V L G ++ ++ G HS A T+ A G
Sbjct: 3840 YAWGSNSEGQLG---LGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPVPPRAPG 3896
Query: 309 GSQAGQLGL 317
S QLGL
Sbjct: 3897 VSVPLQLGL 3905
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 82/189 (43%), Gaps = 28/189 (14%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +GQL G V+ A AP + QV CG+ + + NG V
Sbjct: 3540 WGAGRHGQLAEA-------GRNVMVPAA-----APSFSQAQQVICGQNCTFVIQANGTVL 3587
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGALYAW 307
G GS G+LG + S D +L + AL G + + +CG HS ALT G +++W
Sbjct: 3588 ACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSW 3644
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G R R I L VQ+ +CG H+ V DG++
Sbjct: 3645 GDGDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLF 3694
Query: 368 GWGYNSYGQ 376
+G YG+
Sbjct: 3695 TFGNGDYGR 3703
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VSE EVY WG S Q L G +E + + +A + + G + +++ G
Sbjct: 366 VSETCEVYVWGSNSSHQ-----LVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 420
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ A G G+LGLG +L + + R+I + G HTL +
Sbjct: 421 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RSIKKVSSSKG------SDGHTLAFTT 473
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+G + WG YG+ + S+ YP + + G+V ++AG HSA + +
Sbjct: 474 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 526
>gi|426220634|ref|XP_004004519.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ovis aries]
Length = 4836
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 176/411 (42%), Gaps = 67/411 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
++ ++VWG N Q G L+ K P + N + +A G + AV
Sbjct: 2959 RTKVFVWGLNDKDQLG------GLKGSKIKVPSFSETLSALNV--VQVAGGSKSLFAVTV 3010
Query: 80 DGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPREN 135
+G ++ G G+LG G G P ++ L S VK ++ G H TA
Sbjct: 3011 EGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV----- 3065
Query: 136 DGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
DG +++ WG+ PRL T I ++CGS H AL+
Sbjct: 3066 DG-----KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSS 3118
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGP--RVIKGYAKFLDEAPELEKITQVSCG--EYHSA 241
G L WG EYG+LG G L+ +V+ G+ ++ QV+CG + +
Sbjct: 3119 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-----------RVIQVACGSRDAQTL 3167
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A+++ G V++WG G G+LG + + +P+ + L+G + + CG S ALT
Sbjct: 3168 ALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTKS 3224
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLV 359
G ++ WG +LG G SD + R ++ G ++V A G H L
Sbjct: 3225 GVVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3272
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
G+++ WG N +GQ N +T P+ V G+ + ++A G HS
Sbjct: 3273 VTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3323
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 134/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3069 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 3120
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 3121 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 3173
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 3174 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3230
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV++ G+VY
Sbjct: 3231 GKGDYFRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDAGQVYA 3281
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3282 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3327
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 3008 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQI-----TALSSYVVKKVAVHSGGRHATA 3062
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+
Sbjct: 3063 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------ 3116
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 3117 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3170
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 3171 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 3221
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH S K P+ V L G I VA G +H A+T G
Sbjct: 3222 TKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDAGQ 3278
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 3279 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3325
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 144/327 (44%), Gaps = 50/327 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G + +D+A G H+A V + G
Sbjct: 4062 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRG--TEVVDVAAGGAHSACVTAAGD 4113
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG E + P+ V+ LQ V ++CG+ + +D T+
Sbjct: 4114 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLC--LTDDDTV--- 4168
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 4169 --WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4226
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H SE+GEVYTWG
Sbjct: 4227 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCSEDGEVYTWGD 4277
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G + VACG H+ AW S+
Sbjct: 4278 NDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAWSTSKPAS 4325
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPIL 341
G P +P E + + + IPI+
Sbjct: 4326 AGKLPVQ-----VPMEYN-HLQEIPII 4346
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 175/411 (42%), Gaps = 76/411 (18%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P C A A R + + G + AV +DG
Sbjct: 3956 IYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALAALRPVQLIGGEQTLFAVTADG 4006
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 4007 KLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE------- 4059
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG+ + PR+ T + V+ G H ++ G L
Sbjct: 4060 ---GEVYSWGEAEDGKLGHGNRSPCDRPRVIES--LRGTEVVDVAAGGAHSACVTAAGDL 4114
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSEN 246
WG YG+LG + + L+ P+++ EA + ++ V+C G+ + ++++
Sbjct: 4115 YTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVVDVACGSGDAQTLCLTDD 4165
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4166 DTVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 4222
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTL 358
WG +LG G SD + R P VQ +A G H +
Sbjct: 4223 WGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCV 4264
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
DG ++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4265 CCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4315
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 129/276 (46%), Gaps = 25/276 (9%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N + P+L G + N + H +AL+ G + +WG + G+LG G
Sbjct: 472 RVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG 531
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P+VI ++ + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 532 DTVP-LEEPKVISAFSG----KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 586
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + E +P V L G+ + DVACG + A+T G +++WG G+LG G
Sbjct: 587 ---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 643
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D V V CG ++ +DG+++ WG +
Sbjct: 644 DGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 691
Query: 379 NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ + YP ++ G +V +AAG H L +
Sbjct: 692 HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 124/253 (49%), Gaps = 30/253 (11%)
Query: 134 ENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N +GS + + QV+ GS + A++
Sbjct: 2953 ESAATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + A G G+LG GI+ + PR I + ++ K V G H+ A++
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYV------VKKVAVHSGGRHATALTV 3065
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS ALTS G LY
Sbjct: 3066 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELY 3122
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRD 363
WG + G+LG G T L P + + +L+ +Q VACG + TL +
Sbjct: 3123 TWGLGEYGRLGHGDNTT--QLKP-------KMVKVLLGHRVIQ-VACGSRDAQTLALTDE 3172
Query: 364 GRIHGWGYNSYGQ 376
G + WG +G+
Sbjct: 3173 GLVFSWGDGDFGK 3185
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 135/310 (43%), Gaps = 53/310 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQ-SEFVKSISCGAHC 125
+ G +H A++S+G +++WG E G+LG G P ++ L+ +E V + GAH
Sbjct: 4046 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHS 4105
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCG 175
A L+ WG+ + P+L A + ++ V+CG
Sbjct: 4106 ACVTA----------AGDLYTWGKGRYGRLGHSDSEDQLKPKLV-EALQGHRVV-DVACG 4153
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + L++ + +WG +YG+LGRG +G + P I + +V
Sbjct: 4154 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVKV 4204
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G VYTWG G +LGH S D PR+V L G + +A G +
Sbjct: 4205 ECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSL 4261
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLV 350
H + G +Y WG + GQLG G T P LV V V
Sbjct: 4262 HCVCCSEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRV 4308
Query: 351 ACGHSHTLVY 360
ACG +HTL +
Sbjct: 4309 ACGSAHTLAW 4318
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 45/285 (15%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+L A N + H A+A+ G +++WG + G+LG G + P+ +
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVI 542
Query: 109 KQLQ----SEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT 164
+ V I+CG+ +AAI E L+ WG+ N+ RL G+
Sbjct: 543 SAFSGKQAGKHVVHIACGSTYSAAITAEGE---------LYTWGRG---NYGRLGHGSSE 590
Query: 165 PNTI-----------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
I + V+CGS +A++E G + +WG +YG+LGRG +G + P
Sbjct: 591 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTP 649
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
++I+ + +V CG S A++++G+VY+WG G +LGH G +E
Sbjct: 650 KLIEKLQDL--------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH-----GTEE 696
Query: 272 LL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ P+ + L G + DVA G H ALT +++WG + Q
Sbjct: 697 HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 136/293 (46%), Gaps = 33/293 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG G+ G G L PK + G AG + + IACG ++AA
Sbjct: 511 LAATGEVYSWGCGDGGRLGH-GDTVPLEEPKVIS-AFSGKQAGKHV--VHIACGSTYSAA 566
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E P V L+ V ++CG+ +A
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA------ 620
Query: 137 GTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
++W WG R G TP I + +V CGS +AL++ G +
Sbjct: 621 -VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQV 679
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG + +LG G T E ++ P++++G + +K+ V+ G H A++E+ E
Sbjct: 680 YSWGKGDNQRLGHG-TEEHVRYPKLLEGL--------QGKKVIDVAAGSTHCLALTEDSE 730
Query: 249 VYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
V++W GS Q H +L+ E P + LD I +ACG S A +S
Sbjct: 731 VHSW--GSNDQCQHFDTLRVTKPE--PSALPGLDTKHIVGIACGPAQSFAWSS 779
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 139/340 (40%), Gaps = 63/340 (18%)
Query: 56 CPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
C AN IAC + ++ +G ++T N P+ V+ L S
Sbjct: 446 CEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRN 495
Query: 116 VKSISCGA--HCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAF 163
+ I+ + H A+A +T ++ WG G P++ AF
Sbjct: 496 IVKIAAHSDGHHYLALA---------ATGEVYSWGCGDGGRLGHGDTVPLEEPKVI-SAF 545
Query: 164 TPNTI---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF 220
+ + ++CGS + A++ G L WG YG+LG G + E P ++ G
Sbjct: 546 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-SSEDEAIPMLVAGLKGL 604
Query: 221 LDEAPELEKITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
K+ V+CG + + AV+ENG+V++WG G G+LG D P+ +
Sbjct: 605 --------KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR---GGSDGCKTPKLIE 653
Query: 279 ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
L + + V CG S ALT G +Y+WG +LG G ++ + R
Sbjct: 654 KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG------------TEEHVRYP 701
Query: 339 PILVVPNGVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+L G ++ VA G +H L D +H WG N Q
Sbjct: 702 KLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 138/338 (40%), Gaps = 26/338 (7%)
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEP 132
T + GT++ WG N GQLG K P + L + V+ I A A+
Sbjct: 3947 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADG 4006
Query: 133 RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
+ G + + P L V+ G H +ALS G + +WG
Sbjct: 4007 KLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4066
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
E G+LG G PRVI E+ ++ V+ G HSA V+ G++YTW
Sbjct: 4067 EAEDGKLGHG-NRSPCDRPRVI--------ESLRGTEVVDVAAGGAHSACVTAAGDLYTW 4117
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGS 310
G G G+LGH + +L P+ V AL G + DVACG + LT +++WG
Sbjct: 4118 GKGRYGRLGH---SDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDG 4174
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWG 370
G+LG G +P + D+ + GV V CG ++ + G ++ WG
Sbjct: 4175 DYGKLGRG--GSDGCKVPMKIDS--------LTGLGVVKVECGSQFSVALTKSGAVYTWG 4224
Query: 371 YNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGH 407
Y + + + P V G +V +A G H
Sbjct: 4225 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4262
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 8/107 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG + G G + +R P+Q+ + + IA G H + DG
Sbjct: 4219 AVYTWGKGDYHRLGH-GSDDHVRRPRQVQ-------GLQGKKVIAIATGSLHCVCCSEDG 4270
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
++TWG N+ GQLGDGT + P V LQ + V ++CG+ T A
Sbjct: 4271 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4317
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 74/186 (39%), Gaps = 22/186 (11%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+TQ++C E +S NG VYT S L P+ V L I +A
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------------DTLAPQLVQGLASRNIVKIA 500
Query: 290 C--GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
G H AL + G +Y+WG G+LG G +P E V
Sbjct: 501 AHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPLEEPKVISAFSGKQAGKHV 554
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGG 406
+ACG +++ +G ++ WG +YG+ + S P V G +V +A G G
Sbjct: 555 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSG 614
Query: 407 HSAVLA 412
+ LA
Sbjct: 615 DAQTLA 620
>gi|73952408|ref|XP_536160.2| PREDICTED: E3 ubiquitin-protein ligase HERC2 isoform 1 [Canis lupus
familiaris]
Length = 4837
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 176/411 (42%), Gaps = 67/411 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
++ ++VWG N Q G L+ K P + N + +A G + AV
Sbjct: 2959 RTKVFVWGLNDKDQLG------GLKGSKIKVPSFSETLSALNV--VQVAGGSKSLFAVTV 3010
Query: 80 DGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPREN 135
+G ++ G G+LG G G P ++ L S VK ++ G H TA
Sbjct: 3011 EGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV----- 3065
Query: 136 DGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
DG +++ WG+ PRL T I ++CGS H AL+
Sbjct: 3066 DG-----KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSS 3118
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGP--RVIKGYAKFLDEAPELEKITQVSCG--EYHSA 241
G L WG EYG+LG G L+ +V+ G+ ++ QV+CG + +
Sbjct: 3119 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-----------RVIQVACGSRDAQTL 3167
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A+++ G V++WG G G+LG + + +P+ + L+G + + CG S ALT
Sbjct: 3168 ALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTKS 3224
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLV 359
G ++ WG +LG G SD + R ++ G ++V A G H L
Sbjct: 3225 GVVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3272
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
G+++ WG N +GQ N +T P+ V G+ + ++A G HS
Sbjct: 3273 VTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3323
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 3008 VTVEGKVYACGEATNGRLGLGLSSGTVPIPRQI-----TALSSYVVKKVAVHSGGRHATA 3062
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+
Sbjct: 3063 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------ 3116
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 3117 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3170
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 3171 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 3221
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH S K P+ V L G I VA G +H A+T G
Sbjct: 3222 TKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDAGQ 3278
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 3279 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3325
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 134/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3069 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 3120
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 3121 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 3173
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 3174 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3230
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV++ G+VY
Sbjct: 3231 GKGDYFRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDAGQVYA 3281
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3282 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3327
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 144/327 (44%), Gaps = 50/327 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +D+A G H+A V + G
Sbjct: 4063 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRGIEV--VDVAAGGAHSACVTAAGD 4114
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG E + P+ V+ LQ V ++CG+ + +D T+
Sbjct: 4115 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLC--LTDDDTV--- 4169
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 4170 --WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4227
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 4228 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4278
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G + VACG H+ AW S+
Sbjct: 4279 NDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAWSTSKPAS 4326
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPIL 341
G P + +P E + + + IPI+
Sbjct: 4327 AGKLP-----AQVPMEYN-HLQEIPII 4347
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 174/411 (42%), Gaps = 76/411 (18%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P C A A R + + G + AV +DG
Sbjct: 3957 IYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALATLRPVQLIGGEQTLFAVTADG 4007
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 4008 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE------- 4060
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG+ + PR+ + V+ G H ++ G L
Sbjct: 4061 ---GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAGDL 4115
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSEN 246
WG YG+LG + + L+ P+++ EA + ++ V+C G+ + ++++
Sbjct: 4116 YTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVVDVACGSGDAQTLCLTDD 4166
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4167 DTVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 4223
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTL 358
WG +LG G SD + R P VQ +A G H +
Sbjct: 4224 WGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCV 4265
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
DG ++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4266 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4316
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 129/276 (46%), Gaps = 25/276 (9%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N + P+L G + N + H +AL+ G + +WG + G+LG G
Sbjct: 472 RVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG 531
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P+VI ++ + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 532 DTVP-LEEPKVISAFSG----KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 586
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + E +P V L G+ + DVACG + A+T G +++WG G+LG G
Sbjct: 587 ---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 643
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D V V CG ++ +DG+++ WG +
Sbjct: 644 DGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 691
Query: 379 NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ + YP ++ G +V +AAG H L +
Sbjct: 692 HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 122/253 (48%), Gaps = 30/253 (11%)
Query: 134 ENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N +GS + + QV+ GS + A++
Sbjct: 2953 ESAATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + A G G+LG G++ + PR I + ++ K V G H+ A++
Sbjct: 3012 GKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYV------VKKVAVHSGGRHATALTV 3065
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS ALTS G LY
Sbjct: 3066 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELY 3122
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRD 363
WG + G+LG G T + + +L+ +Q VACG + TL +
Sbjct: 3123 TWGLGEYGRLGHGDNTTQLKP---------KMVKVLLGHRVIQ-VACGSRDAQTLALTDE 3172
Query: 364 GRIHGWGYNSYGQ 376
G + WG +G+
Sbjct: 3173 GLVFSWGDGDFGK 3185
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 134/310 (43%), Gaps = 53/310 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHC 125
+ G +H A++S+G +++WG E G+LG G P ++ L+ E V + GAH
Sbjct: 4047 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4106
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCG 175
A L+ WG+ + P+L A + ++ V+CG
Sbjct: 4107 ACVTA----------AGDLYTWGKGRYGRLGHSDSEDQLKPKLV-EALQGHRVV-DVACG 4154
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + L++ + +WG +YG+LGRG +G + P I + +V
Sbjct: 4155 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVKV 4205
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G VYTWG G +LGH S D PR+V L G + +A G +
Sbjct: 4206 ECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSL 4262
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLV 350
H T G +Y WG + GQLG G T P LV V V
Sbjct: 4263 HCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRV 4309
Query: 351 ACGHSHTLVY 360
ACG +HTL +
Sbjct: 4310 ACGSAHTLAW 4319
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 45/285 (15%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+L A N + H A+A+ G +++WG + G+LG G + P+ +
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVI 542
Query: 109 KQLQ----SEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT 164
+ V I+CG+ +AAI E L+ WG+ N+ RL G+
Sbjct: 543 SAFSGKQAGKHVVHIACGSTYSAAITAEGE---------LYTWGRG---NYGRLGHGSSE 590
Query: 165 PNTI-----------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
I + V+CGS +A++E G + +WG +YG+LGRG +G + P
Sbjct: 591 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTP 649
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
++I+ + +V CG S A++++G+VY+WG G +LGH G +E
Sbjct: 650 KLIEKLQDL--------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH-----GTEE 696
Query: 272 LL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ P+ + L G + DVA G H ALT +++WG + Q
Sbjct: 697 HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 136/293 (46%), Gaps = 33/293 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG G+ G G L PK + G AG + + IACG ++AA
Sbjct: 511 LAATGEVYSWGCGDGGRLGH-GDTVPLEEPKVIS-AFSGKQAGKHV--VHIACGSTYSAA 566
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E P V L+ V ++CG+ +A
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA------ 620
Query: 137 GTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
++W WG R G TP I + +V CGS +AL++ G +
Sbjct: 621 -VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQV 679
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG + +LG G T E ++ P++++G + +K+ V+ G H A++E+ E
Sbjct: 680 YSWGKGDNQRLGHG-TEEHVRYPKLLEGL--------QGKKVIDVAAGSTHCLALTEDSE 730
Query: 249 VYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
V++W GS Q H +L+ E P + LD I +ACG S A +S
Sbjct: 731 VHSW--GSNDQCQHFDTLRVTKPE--PAALPGLDTKHIVGIACGPAQSFAWSS 779
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 139/340 (40%), Gaps = 63/340 (18%)
Query: 56 CPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
C AN IAC + ++ +G ++T N P+ V+ L S
Sbjct: 446 CEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRN 495
Query: 116 VKSISCGA--HCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAF 163
+ I+ + H A+A +T ++ WG G P++ AF
Sbjct: 496 IVKIAAHSDGHHYLALA---------ATGEVYSWGCGDGGRLGHGDTVPLEEPKVI-SAF 545
Query: 164 TPNTI---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF 220
+ + ++CGS + A++ G L WG YG+LG G + E P ++ G
Sbjct: 546 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-SSEDEAIPMLVAGLKGL 604
Query: 221 LDEAPELEKITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
K+ V+CG + + AV+ENG+V++WG G G+LG D P+ +
Sbjct: 605 --------KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR---GGSDGCKTPKLIE 653
Query: 279 ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
L + + V CG S ALT G +Y+WG +LG G ++ + R
Sbjct: 654 KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG------------TEEHVRYP 701
Query: 339 PILVVPNGVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+L G ++ VA G +H L D +H WG N Q
Sbjct: 702 KLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 110/281 (39%), Gaps = 69/281 (24%)
Query: 186 GLLQAWGYNEYGQLGRGI---------TCEGLQGPRVIK--------------------G 216
G + WG+N GQLG GI CE L R ++ G
Sbjct: 3955 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4013
Query: 217 Y----------AKFLDEAPELEKITQ-------VSCGEYHSAAVSENGEVYTWGLGSVGQ 259
Y + + LE I V+ G H A+S GEVY+WG G+
Sbjct: 4014 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4073
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LGH + D+ PR + +L GI + DVA GG HS +T+ G LY WG + G+LG
Sbjct: 4074 LGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG--- 4127
Query: 320 QTRSFSLIPNESDTYFRNIPILVVP---NGVQLVAC--GHSHTLVYMRDGRIHGWGYNSY 374
SD+ + P LV + V VAC G + TL D + WG Y
Sbjct: 4128 ----------HSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDY 4177
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADA 414
G+ S P +D G V K+ G S L +
Sbjct: 4178 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4218
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG + G G + +R P+Q+ + + IA G H DG
Sbjct: 4220 AVYTWGKGDYHRLGH-GSDDHVRRPRQVQ-------GLQGKKVIAIATGSLHCVCCTEDG 4271
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
++TWG N+ GQLGDGT + P V LQ + V ++CG+ T A
Sbjct: 4272 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4318
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 74/186 (39%), Gaps = 22/186 (11%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+TQ++C E +S NG VYT S L P+ V L I +A
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------------DTLAPQLVQGLASRNIVKIA 500
Query: 290 C--GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
G H AL + G +Y+WG G+LG G +P E V
Sbjct: 501 AHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPLEEPKVISAFSGKQAGKHV 554
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGG 406
+ACG +++ +G ++ WG +YG+ + S P V G +V +A G G
Sbjct: 555 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSG 614
Query: 407 HSAVLA 412
+ LA
Sbjct: 615 DAQTLA 620
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 82/218 (37%), Gaps = 62/218 (28%)
Query: 246 NGEVYTWGLGSVGQLG--------------------HCSLQSGDKELL------------ 273
+G +Y WG GQLG L G++ L
Sbjct: 3954 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4013
Query: 274 -----------------PRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWGGSQAGQ 314
P + ++ +FIK VA GG H AL+S+G +Y+WG ++ G+
Sbjct: 4014 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4073
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LG G RS P ++ R I ++ VA G +H+ G ++ WG Y
Sbjct: 4074 LGHG--NRSPCDRPRVIES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRY 4123
Query: 375 GQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
G+ + S P V+ G V +A G G + L
Sbjct: 4124 GRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTL 4161
>gi|449268693|gb|EMC79542.1| X-linked retinitis pigmentosa GTPase regulator, partial [Columba
livia]
Length = 719
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 163/365 (44%), Gaps = 46/365 (12%)
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
N + + I+CG EHTA V +G L+ +G+N +GQLG G++ P VK L+ E K
Sbjct: 29 NDKPVLISCGDEHTAIVTGNGKLYMFGSNNWGQLGLGSKNTVSKPTCVKALKPEKTKLAV 88
Query: 121 CGAHCTAAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVH 178
CG + T E G S +L + + S F + + FT I Q++ GS
Sbjct: 89 CGRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERSTFHLISF--FTNQHKIKQLAAGSYT 146
Query: 179 VVALSECGLLQAWGYNEYGQLGRG------ITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
A++E G L WG N GQ+G + C+ G + ++
Sbjct: 147 SAAVTEDGQLFVWGDNSEGQIGLADEACVSVPCQVDVG-----------------KPVSS 189
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF--IKDVAC 290
+SCG YHSA ++ +GE+YT+G G+LG Q + +P+ V GI + VAC
Sbjct: 190 ISCGYYHSALITGDGELYTFGEPENGKLGLLPEQLKNNR-VPQPV---PGIMEKVNKVAC 245
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
GG H+ LT +Y +G Q GQLG G T F +S + R I +
Sbjct: 246 GGEHTVVLTETD-VYTFGLGQYGQLGHG--TFIFETSVPKSVKHLRRHKICN-------I 295
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV---DWCVGEVRKLAAGGGH 407
CG +HT V +G + +G +G+ + Y P ++ V +A GG H
Sbjct: 296 TCGENHTAVVAENGLMFTFGDGRHGKLGLGEENYTNQFDPTLCYNFLRFTVLLVACGGCH 355
Query: 408 SAVLA 412
V A
Sbjct: 356 MLVFA 360
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 88/189 (46%), Gaps = 28/189 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++VWG N GQ G E + +P Q+ G P + I+CG+ H+A + DG
Sbjct: 156 LFVWGDNSEGQIGL-ADEACVSVPCQVD---VGKPVSS------ISCGYYHSALITGDGE 205
Query: 83 LFTWGANEFGQLGDGTEEGRKH--PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
L+T+G E G+LG E+ + + P+ V + E V ++CG T + E +
Sbjct: 206 LYTFGEPENGKLGLLPEQLKNNRVPQPVPGIM-EKVNKVACGGEHTVVLTE-----TDVY 259
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGY 193
T L +GQ F + P ++ IC ++CG H ++E GL+ +G
Sbjct: 260 TFGLGQYGQLGHGTF---IFETSVPKSVKHLRRHKICNITCGENHTAVVAENGLMFTFGD 316
Query: 194 NEYGQLGRG 202
+G+LG G
Sbjct: 317 GRHGKLGLG 325
>gi|348542108|ref|XP_003458528.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Oreochromis
niloticus]
Length = 4936
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 117/405 (28%), Positives = 178/405 (43%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ P+L A A + I G T ++SDG+
Sbjct: 381 VYVWGSNSSHQLVEGTQEKILQ------PKLASSFADAQT----IEAGQYCTFVISSDGS 430
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA----HCTAAIAEPRENDGT 138
+ G +G+LG G + +K+ +K +S H A E
Sbjct: 431 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTE------- 483
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG + +P+L G ++C VS G H A+SE G L
Sbjct: 484 ---GEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVSEDGEL 539
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G + P ++K ++ + +VSCG H+ A+S++G
Sbjct: 540 YTWGEGDFGRLGHGDS-NSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 588
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ V AL G+FI+ V G S ALTS G +Y
Sbjct: 589 TVWSFGGGDNGKLGH-----GDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVY 643
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V ++ G SH L D
Sbjct: 644 AWGCGAC--LGCG-SSEATALRP-------KLIEELATTRVVD-ISIGDSHCLALSHDNE 692
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 693 VYAWGNNSMGQCGQGNSTGPITKPKKVIGLDGVAIQQISAGTSHS 737
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 170/382 (44%), Gaps = 79/382 (20%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI--- 139
+F WGA GQL E GR + + CG +CT I + +GT+
Sbjct: 4074 VFLWGAGRHGQLA---EAGRNILVPTIAPSFSQAQQVVCGQNCTFVI----QPNGTVLAC 4126
Query: 140 ---STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQV--SCGSV-HVVALSECGLLQAWGY 193
S RL GQ + L + ++ Q+ SCGS H +AL+E G + +WG
Sbjct: 4127 GEGSYGRL---GQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4183
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
+YG+LG G + + PR I EA + E++ Q+SCG HSA V+ +G+++T+G
Sbjct: 4184 GDYGKLGHG-NSDRQRRPRQI--------EALQGEEVVQMSCGFKHSAVVTADGKLFTFG 4234
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL-YAWGGSQA 312
G G+LG L + + LP +V AL+G + VACG H+ +++ G + +A+G
Sbjct: 4235 NGDYGRLG---LGNTSNKKLPEKVTALEGYHVGQVACGLNHTLVVSADGMMVWAFGDGDY 4291
Query: 313 GQLGLGPQTRSFSLIPNESDTY--------------------------FRNIPILVVPNG 346
G+LGLG T S P + D F ++ +P G
Sbjct: 4292 GKLGLGNSTAKSS--PQKVDVLCGIGIKKVACGTQFSVALTKDGKVFTFGQDRLIGLPEG 4349
Query: 347 ------------------VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYP 388
+Q VA G HTLV G ++ WG NS GQ + + P
Sbjct: 4350 RARNHNRPQQVPGLSGIHIQDVAVGAEHTLVLSSTGDVYTWGSNSEGQLGLGHTNHVREP 4409
Query: 389 SPVDWCVGE-VRKLAAGGGHSA 409
+ V G+ + +++AG HSA
Sbjct: 4410 TLVTTLQGKNIHQISAGRCHSA 4431
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 137/269 (50%), Gaps = 41/269 (15%)
Query: 65 LDIACGHE-HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA 123
L +CG + H+ A+ G +F+WG ++G+LG G + ++ P +++ LQ E V +SCG
Sbjct: 4159 LVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGF 4218
Query: 124 HCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-----------ICQV 172
+A + DG +L+ +G ++ RL G + + + QV
Sbjct: 4219 KHSAVVTA----DG-----KLFTFGNG---DYGRLGLGNTSNKKLPEKVTALEGYHVGQV 4266
Query: 173 SCGSVHVVALSECGLLQ-AWGYNEYGQLGRGITC--EGLQGPRVIKGYAKFLDEAPELEK 229
+CG H + +S G++ A+G +YG+LG G + Q V+ G
Sbjct: 4267 ACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG----------- 4315
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
I +V+CG S A++++G+V+T+G + L ++ ++ P++V L GI I+DVA
Sbjct: 4316 IKKVACGTQFSVALTKDGKVFTFGQDRLIGLPEGRARNHNR---PQQVPGLSGIHIQDVA 4372
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLG 318
G H+ L+S G +Y WG + GQLGLG
Sbjct: 4373 VGAEHTLVLSSTGDVYTWGSNSEGQLGLG 4401
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 140/307 (45%), Gaps = 43/307 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V +DG
Sbjct: 4178 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTADGK 4229
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PEKV L+ V ++CG + T ++ DG +
Sbjct: 4230 LFTFGNGDYGRLGLGNTSNKKLPEKVTALEGYHVGQVACGLNHTLVVSA----DGMM--- 4282
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNT------IIC-----QVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T + ++C +V+CG+ VAL++ G + +
Sbjct: 4283 -VWAFGDG---DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGKVFTF 4338
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ + G + I V+ G H+ +S G+VYT
Sbjct: 4339 GQDRLIGLPEG-RARNHNRPQQVPGLSGI--------HIQDVAVGAEHTLVLSSTGDVYT 4389
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWGGS 310
WG S GQLG L + P V L G I ++ G HS A T+ A G S
Sbjct: 4390 WGSNSEGQLG---LGHTNHVREPTLVTTLQGKNIHQISAGRCHSAAWTAPSVPPRAPGSS 4446
Query: 311 QAGQLGL 317
QLGL
Sbjct: 4447 VPLQLGL 4453
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 136/289 (47%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV+ DG
Sbjct: 486 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVSEDGE 538
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 539 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 589
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P + I +V GS +AL+ G + AW
Sbjct: 590 -VWSFG---GGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAW 645
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A ++ +S G+ H A+S + EVY
Sbjct: 646 GCG--ACLGCGSSEATALRPKLIEELAT--------TRVVDISIGDSHCLALSHDNEVYA 695
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V+ LDG+ I+ ++ G HS A T+
Sbjct: 696 WGNNSMGQCGQGN--STGPITKPKKVIGLDGVAIQQISAGTSHSLAWTA 742
>gi|301755556|ref|XP_002913645.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC5-like
[Ailuropoda melanoleuca]
Length = 1035
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 122/258 (47%), Gaps = 39/258 (15%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I Q++CG H +ALS+ G L AWG N +GQLG G + P+ ++ L P
Sbjct: 151 IIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEH----LSGVP--- 203
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
+ Q+S G+ HS A+S +G VY+WG +GQLG L D E P + LD ++ +
Sbjct: 204 -LVQISAGKAHSMALSMSGNVYSWGRNDLGQLG---LGHTDGEDFPSLIETLDNQQVEFL 259
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---N 345
ACGG H+ LT+ G ++ +G + GQLG N + R P LV N
Sbjct: 260 ACGGSHTALLTTDGLVFTFGAGKYGQLG-----------HNSTQNELR--PRLVTELAGN 306
Query: 346 GVQLVACGHSHTLVYMRD-GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRK---- 400
V +ACG HTL Y+ D G++ +G GQ N + P P+ E K
Sbjct: 307 RVTQIACGRRHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELKFESR 366
Query: 401 -------LAAGGGHSAVL 411
+ AGG S +L
Sbjct: 367 TSDKELVMIAGGNQSVLL 384
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 96/200 (48%), Gaps = 21/200 (10%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+ I Q++CG+YHS A+S+ GE++ WG GQLG L + P+ V L G+ +
Sbjct: 149 KSIIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPT--PQAVEHLSGVPLVQ 206
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP--- 344
++ G HS AL+ G +Y+WG + GQLGLG T + P L+
Sbjct: 207 ISAGKAHSMALSMSGNVYSWGRNDLGQLGLG-------------HTDGEDFPSLIETLDN 253
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAA 403
V+ +ACG SHT + DG + +G YGQ + + P V G V ++A
Sbjct: 254 QQVEFLACGGSHTALLTTDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQIAC 313
Query: 404 GGGHSAVLADACSLKELCEF 423
G H+ LA L ++ F
Sbjct: 314 GRRHT--LAYVSDLGKVFSF 331
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 101/210 (48%), Gaps = 32/210 (15%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISCGA 123
+ IACG H+ A++ G LF WG N GQLG G P+ V+ L + IS G
Sbjct: 152 IQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAGK 211
Query: 124 HCTAAIAEPRENDGTISTSRLWVWGQN----------QGSNFPRLFWGAFTPNTIICQVS 173
+ A++ + ++ WG+N G +FP L N + ++
Sbjct: 212 AHSMALS---------MSGNVYSWGRNDLGQLGLGHTDGEDFPSLI--ETLDNQQVEFLA 260
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
CG H L+ GL+ +G +YGQLG T L+ PR++ A ++TQ+
Sbjct: 261 CGGSHTALLTTDGLVFTFGAGKYGQLGHNSTQNELR-PRLVTELAG--------NRVTQI 311
Query: 234 SCGEYHSAA-VSENGEVYTWGLGSVGQLGH 262
+CG H+ A VS+ G+V+++G G GQLG+
Sbjct: 312 ACGRRHTLAYVSDLGKVFSFGSGKEGQLGN 341
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 87/186 (46%), Gaps = 19/186 (10%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G + P Q L G P + I+ G H+ A++ G
Sbjct: 170 LFAWGQNLHGQLGVGRLFASIPTP-QAVEHLSGVPL------VQISAGKAHSMALSMSGN 222
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+++WG N+ GQLG G +G P ++ L ++ V+ ++CG TA + DG + T
Sbjct: 223 VYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHTALLT----TDGLVFTF 278
Query: 143 RLWVWGQ-----NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYNEY 196
+GQ Q PRL + Q++CG H +A +S+ G + ++G +
Sbjct: 279 GAGKYGQLGHNSTQNELRPRLV--TELAGNRVTQIACGRRHTLAYVSDLGKVFSFGSGKE 336
Query: 197 GQLGRG 202
GQLG G
Sbjct: 337 GQLGNG 342
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD-G 81
++ +G GQ G + +LR P L AG +R IACG HT A SD G
Sbjct: 275 VFTFGAGKYGQLGHNSTQNELR------PRLVTELAG--NRVTQIACGRRHTLAYVSDLG 326
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVK 117
+F++G+ + GQLG+G + P +K +E +K
Sbjct: 327 KVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELK 362
>gi|326670703|ref|XP_003199276.1| PREDICTED: hypothetical protein LOC571327 [Danio rerio]
Length = 1698
Score = 116 bits (291), Expect = 2e-23, Method: Composition-based stats.
Identities = 112/351 (31%), Positives = 158/351 (45%), Gaps = 31/351 (8%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
I+CG H+A V G LF +G N GQLG + P VK L+ E +S++CG T
Sbjct: 39 ISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIKGPVTKPVCVKVLKGERAQSVACGTDHT 98
Query: 127 AAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
E G S +L + N +F RL F I +S G AL+E
Sbjct: 99 LVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRL--RPFCDYAPIKLLSAGDHTSAALTE 156
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G L WG N GQLG G L + G + I VSCG HSA V+
Sbjct: 157 DGRLFLWGDNSAGQLGFGNDSHALLPKELNMG-----------QSIHWVSCGYRHSALVT 205
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
++G+VY++G + G+LG + Q + P+RV +L + VACGG H+ ALT + L
Sbjct: 206 DSGDVYSFGESADGRLGLSAHQLANHS-YPQRVESLHSVL--QVACGGKHTLALT-EDEL 261
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 364
Y +GG + GQLGLG T F + +FR V V CG H+ + G
Sbjct: 262 YCFGGGEFGQLGLG--TLVFVADSPVAVGHFRK-------GRVTHVTCGEQHSALITDSG 312
Query: 365 RIHGWGYNSYGQA--ANEKSTYAWYPSPVD-WCVGEVRKLAAGGGHSAVLA 412
++ +G +G+ +E T + P+ + V +A G H V A
Sbjct: 313 LLYTFGDGRHGKLGHGDENFTNQFTPTVCQRFFEYSVMTVACGSSHMLVFA 363
>gi|440639174|gb|ELR09093.1| hypothetical protein GMDG_03677 [Geomyces destructans 20631-21]
Length = 568
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 181/435 (41%), Gaps = 57/435 (13%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLP-PELFGCPAGANSRWLDIACGHEHTAAVA 78
K +YV+G SG+ G + + P + P L + + + I+ G H AA+
Sbjct: 142 KLDVYVFGEGTSGELGLGNKTIDNKKPIDVKRPRLNENLSASKVGVVQISVGGMHCAALT 201
Query: 79 SDGTLFTWGANEFGQLG-------------DGTEEGRKHPEKVKQLQSEFV------KSI 119
D + TWG N+ G LG DG + G + ++ E K
Sbjct: 202 HDNKILTWGVNDQGALGRDTKWEGGLKDMDDGIDSGSESDDEDAMNPRESTPAAVDPKHF 261
Query: 120 SCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSN----FPRLFWGAFTPNTI-----IC 170
G T A + +W WG + ++ F TP I I
Sbjct: 262 PEGIVFTQVCASDSATFVVTADGSVWGWGTFRSNDGILGFTPEIMVQNTPMKIPELKKIT 321
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
+S G+ H++AL + AWG + QLGR + G + + + P +I
Sbjct: 322 TLSAGANHILALDAKNNVWAWGSGQQNQLGRRVVERTRTGGLIPREFG-----LPR-GRI 375
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA--LDGIFIKDV 288
QV+ G YHS AVS++G V+ WGL + G+ G D ++P+ V L IK++
Sbjct: 376 EQVATGAYHSFAVSKDGRVWAWGLNNFGECGIVEGAGEDNAVIPKPTVVTELKPYNIKEI 435
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTY-------FRNIPIL 341
GG HS A T KG L AWG S GQLG+ S +P E T+ +P++
Sbjct: 436 TGGGHHSIACTDKGELLAWGRSDGGQLGV-----DISKVPKEHITFDERENPRMVTVPVV 490
Query: 342 VVPNGVQLVACGHSHTLVYMRDGRIHGWGYNS---YGQAANEKSTYAWYPSPVDWCVGEV 398
V VA G ++ +G+ + WG+++ GQ +++ A + +D
Sbjct: 491 VPGIKAATVAAGGDNSFAVDTEGKAYSWGFSANYQTGQGSDDDVDIATH---IDNTAVRG 547
Query: 399 RKL--AAGGGHSAVL 411
+KL A GG ++L
Sbjct: 548 KKLNFAGAGGQFSIL 562
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 84/211 (39%), Gaps = 39/211 (18%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ AK+ ++ WG Q GR+ ER L P FG P G R +A G H+ A
Sbjct: 333 LDAKNNVWAWGSGQQNQLGRRVVERTRT--GGLIPREFGLPRG---RIEQVATGAYHSFA 387
Query: 77 VASDGTLFTWGANEFGQLG--DGTEEGR---KHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
V+ DG ++ WG N FG+ G +G E P V +L+ +K I+ G H + A +
Sbjct: 388 VSKDGRVWAWGLNNFGECGIVEGAGEDNAVIPKPTVVTELKPYNIKEITGGGHHSIACTD 447
Query: 132 PRENDGTISTSRLWVWGQNQGSNF-------------------PRLFW-GAFTPNTIICQ 171
E L WG++ G PR+ P
Sbjct: 448 KGE---------LLAWGRSDGGQLGVDISKVPKEHITFDERENPRMVTVPVVVPGIKAAT 498
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
V+ G + A+ G +WG++ Q G+G
Sbjct: 499 VAAGGDNSFAVDTEGKAYSWGFSANYQTGQG 529
>gi|291408963|ref|XP_002720777.1| PREDICTED: regulator of chromosome condensation (RCC1) and BTB
(POZ) domain containing protein 1 [Oryctolagus
cuniculus]
Length = 531
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 148/366 (40%), Gaps = 81/366 (22%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G +A + ++V+G N+S G G + +PK+L G + L
Sbjct: 26 VFGTSANEALYVTDSDEVFVFGLNYSNCLG-TGDNQSTLVPKKLEA-----LCGKKIKSL 79
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
G H DG ++ WG N + QLG+GT P +V C
Sbjct: 80 SYGSG-PHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQV----------------C 122
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
T + + + +V+CGS H + L+
Sbjct: 123 TNLLIKQ------------------------------------VVEVACGSHHSMVLAAD 146
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + AWGYN GQ+G G T PR + ++++ ++CG+ S AV +
Sbjct: 147 GEVYAWGYNNCGQVGSGSTANQ-PTPRKVTN-------CLHIKRVVGIACGQTSSMAVLD 198
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
NGEVY WG GQLG L + +L P RV AL + + + CG H+ ALT +G LY
Sbjct: 199 NGEVYAWGYNGNGQLG---LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLY 255
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDG 364
AWG + GQLG G + S P + V++ AC +HT + G
Sbjct: 256 AWGANTYGQLGTGNKNNLLS--PAHVMVEKERV--------VEIAACHSAHTSAAKTQGG 305
Query: 365 RIHGWG 370
++ WG
Sbjct: 306 HVYMWG 311
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 115/238 (48%), Gaps = 34/238 (14%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HV+ +E G++ AWG+N Y QLG G T +G+ +V ++++ +V+CG
Sbjct: 86 HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLL--------IKQVVEVACGS 137
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV---ACGGVH 294
+HS ++ +GEVY WG + GQ+G S + + PR+V + + IK V ACG
Sbjct: 138 HHSMVLAADGEVYAWGYNNCGQVGSGSTAN---QPTPRKVT--NCLHIKRVVGIACGQTS 192
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG---VQLVA 351
S A+ G +YAWG + GQLGLG + P+ V V +
Sbjct: 193 SMAVLDNGEVYAWGYNGNGQLGLGNNGNQLT-------------PVRVAALHSVCVNQIV 239
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
CG++HTL +G ++ WG N+YGQ P+ V V + R + HSA
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHV--MVEKERVVEIAACHSA 295
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 86/173 (49%), Gaps = 17/173 (9%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHSCALT 299
V+++ EV+ +GL LG +GD + L+P+++ AL G IK ++ G G H T
Sbjct: 37 VTDSDEVFVFGLNYSNCLG-----TGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLST 91
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
G +YAWG + QLG G + + I ++ L++ V+ VACG H++V
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTN--------LLIKQVVE-VACGSHHSMV 142
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
DG ++ WGYN+ GQ + + P V C+ R + G ++ +A
Sbjct: 143 LAADGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMA 195
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 20/151 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WGYN +GQ G QL P ++ C I CG+ HT A+ +G
Sbjct: 202 VYAWGYNGNGQLGLGNNGNQLT-PVRVAALHSVCVN-------QIVCGYAHTLALTDEGL 253
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
L+ WGAN +GQLG G + P V + V+ +C AH +AA +
Sbjct: 254 LYAWGANTYGQLGTGNKNNLLSPAHVMVEKERVVEIAACHSAHTSAAKTQG--------- 304
Query: 142 SRLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 305 GHVYMWGQCRGQSVILPHLTHFSCTDDVFAC 335
>gi|329663335|ref|NP_001193010.1| E3 ubiquitin-protein ligase HERC2 [Bos taurus]
gi|296490789|tpg|DAA32902.1| TPA: hect domain and RLD 3-like [Bos taurus]
Length = 4837
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 176/411 (42%), Gaps = 67/411 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
++ ++VWG N Q G L+ K P + N + +A G + AV
Sbjct: 2959 RTKVFVWGLNDKDQLG------GLKGSKIKVPSFSETLSALNV--VQVAGGSKSLFAVTV 3010
Query: 80 DGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPREN 135
+G ++ G G+LG G G P ++ L S VK ++ G H TA
Sbjct: 3011 EGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV----- 3065
Query: 136 DGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
DG +++ WG+ PRL T I ++CGS H AL+
Sbjct: 3066 DG-----KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSS 3118
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGP--RVIKGYAKFLDEAPELEKITQVSCG--EYHSA 241
G L WG EYG+LG G L+ +V+ G+ ++ QV+CG + +
Sbjct: 3119 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-----------RVIQVACGSRDAQTL 3167
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A+++ G V++WG G G+LG + + +P+ + L+G + + CG S ALT
Sbjct: 3168 ALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTKS 3224
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLV 359
G ++ WG +LG G SD + R ++ G ++V A G H L
Sbjct: 3225 GVVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3272
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
G+++ WG N +GQ N +T P+ V G+ + ++A G HS
Sbjct: 3273 VTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3323
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 3008 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQI-----TALSSYVVKKVAVHSGGRHATA 3062
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+
Sbjct: 3063 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------ 3116
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 3117 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3170
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 3171 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 3221
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH S K P+ V L G I VA G +H A+T G
Sbjct: 3222 TKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDAGQ 3278
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 3279 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3325
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 134/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3069 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 3120
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 3121 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 3173
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 3174 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3230
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV++ G+VY
Sbjct: 3231 GKGDYFRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDAGQVYA 3281
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3282 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3327
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 144/327 (44%), Gaps = 50/327 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G + +D+A G H+A V + G
Sbjct: 4063 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRG--TEVVDVAAGGAHSACVTAAGD 4114
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG E + P+ V+ LQ V ++CG+ + +D T+
Sbjct: 4115 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLC--LTDDDTV--- 4169
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 4170 --WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4227
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H SE+GEVYTWG
Sbjct: 4228 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCSEDGEVYTWGD 4278
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G + VACG H+ AW S+
Sbjct: 4279 NDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAWSTSKPAS 4326
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPIL 341
G P +P E + + + IPI+
Sbjct: 4327 AGKLPVQ-----VPMEYN-HLQEIPII 4347
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 175/411 (42%), Gaps = 76/411 (18%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P C A A R + + G + AV +DG
Sbjct: 3957 IYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALAALRPVQLIGGEQTLFAVTADG 4007
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 4008 KLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE------- 4060
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG+ + PR+ T + V+ G H ++ G L
Sbjct: 4061 ---GEVYSWGEAEDGKLGHGNRSPCDRPRVIES--LRGTEVVDVAAGGAHSACVTAAGDL 4115
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSEN 246
WG YG+LG + + L+ P+++ EA + ++ V+C G+ + ++++
Sbjct: 4116 YTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVVDVACGSGDAQTLCLTDD 4166
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4167 DTVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 4223
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTL 358
WG +LG G SD + R P VQ +A G H +
Sbjct: 4224 WGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCV 4265
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
DG ++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4266 CCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4316
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 129/276 (46%), Gaps = 25/276 (9%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N + P+L G + N + H +AL+ G + +WG + G+LG G
Sbjct: 472 RVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG 531
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P+VI ++ + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 532 DTVP-LEEPKVISAFSG----KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 586
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + E +P V L G+ + DVACG + A+T G +++WG G+LG G
Sbjct: 587 ---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 643
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D V V CG ++ +DG+++ WG +
Sbjct: 644 DGCKTPKLIEKLQDL------------DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLG 691
Query: 379 NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ + YP ++ G +V +AAG H L +
Sbjct: 692 HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 122/253 (48%), Gaps = 30/253 (11%)
Query: 134 ENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N +GS + + QV+ GS + A++
Sbjct: 2953 ESAATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + A G G+LG GI+ + PR I + ++ K V G H+ A++
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYV------VKKVAVHSGGRHATALTV 3065
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS ALTS G LY
Sbjct: 3066 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELY 3122
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRD 363
WG + G+LG G T + + +L+ +Q VACG + TL +
Sbjct: 3123 TWGLGEYGRLGHGDNTTQLKP---------KMVKVLLGHRVIQ-VACGSRDAQTLALTDE 3172
Query: 364 GRIHGWGYNSYGQ 376
G + WG +G+
Sbjct: 3173 GLVFSWGDGDFGK 3185
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 135/310 (43%), Gaps = 53/310 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQ-SEFVKSISCGAHC 125
+ G +H A++S+G +++WG E G+LG G P ++ L+ +E V + GAH
Sbjct: 4047 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHS 4106
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCG 175
A L+ WG+ + P+L A + ++ V+CG
Sbjct: 4107 ACVTA----------AGDLYTWGKGRYGRLGHSDSEDQLKPKLV-EALQGHRVV-DVACG 4154
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + L++ + +WG +YG+LGRG +G + P I + +V
Sbjct: 4155 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVKV 4205
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G VYTWG G +LGH S D PR+V L G + +A G +
Sbjct: 4206 ECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSL 4262
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLV 350
H + G +Y WG + GQLG G T P LV V V
Sbjct: 4263 HCVCCSEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRV 4309
Query: 351 ACGHSHTLVY 360
ACG +HTL +
Sbjct: 4310 ACGSAHTLAW 4319
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 45/285 (15%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+L A N + H A+A+ G +++WG + G+LG G + P+ +
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVI 542
Query: 109 KQLQ----SEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT 164
+ V I+CG+ +AAI E L+ WG+ N+ RL G+
Sbjct: 543 SAFSGKQAGKHVVHIACGSTYSAAITAEGE---------LYTWGRG---NYGRLGHGSSE 590
Query: 165 PNTI-----------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
I + V+CGS +A++E G + +WG +YG+LGRG +G + P
Sbjct: 591 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTP 649
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
++I+ + +V CG S A++++G+VY+WG G +LGH G +E
Sbjct: 650 KLIEKLQDL--------DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGH-----GTEE 696
Query: 272 LL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ P+ + L G + DVA G H ALT +++WG + Q
Sbjct: 697 HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 136/293 (46%), Gaps = 33/293 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG G+ G G L PK + G AG + + IACG ++AA
Sbjct: 511 LAATGEVYSWGCGDGGRLGH-GDTVPLEEPKVIS-AFSGKQAGKHV--VHIACGSTYSAA 566
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E P V L+ V ++CG+ +A
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA------ 620
Query: 137 GTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
++W WG R G TP I + +V CGS VAL++ G +
Sbjct: 621 -VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQV 679
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG + +LG G T E ++ P++++G + +K+ V+ G H A++E+ E
Sbjct: 680 YSWGKGDNQRLGHG-TEEHVRYPKLLEGL--------QGKKVIDVAAGSTHCLALTEDSE 730
Query: 249 VYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
V++W GS Q H +L+ E P + LD I +ACG S A +S
Sbjct: 731 VHSW--GSNDQCQHFDTLRVTKPE--PSALPGLDTKHIVGIACGPAQSFAWSS 779
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 139/340 (40%), Gaps = 63/340 (18%)
Query: 56 CPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
C AN IAC + ++ +G ++T N P+ V+ L S
Sbjct: 446 CEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRN 495
Query: 116 VKSISCGA--HCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAF 163
+ I+ + H A+A +T ++ WG G P++ AF
Sbjct: 496 IVKIAAHSDGHHYLALA---------ATGEVYSWGCGDGGRLGHGDTVPLEEPKVI-SAF 545
Query: 164 TPNTI---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF 220
+ + ++CGS + A++ G L WG YG+LG G + E P ++ G
Sbjct: 546 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-SSEDEAIPMLVAGLKGL 604
Query: 221 LDEAPELEKITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
K+ V+CG + + AV+ENG+V++WG G G+LG D P+ +
Sbjct: 605 --------KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR---GGSDGCKTPKLIE 653
Query: 279 ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
L + + V CG S ALT G +Y+WG +LG G ++ + R
Sbjct: 654 KLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHG------------TEEHVRYP 701
Query: 339 PILVVPNGVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+L G ++ VA G +H L D +H WG N Q
Sbjct: 702 KLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 138/338 (40%), Gaps = 26/338 (7%)
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEP 132
T + GT++ WG N GQLG K P + L + V+ I A A+
Sbjct: 3948 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADG 4007
Query: 133 RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
+ G + + P L V+ G H +ALS G + +WG
Sbjct: 4008 KLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4067
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
E G+LG G PRVI E+ ++ V+ G HSA V+ G++YTW
Sbjct: 4068 EAEDGKLGHG-NRSPCDRPRVI--------ESLRGTEVVDVAAGGAHSACVTAAGDLYTW 4118
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGS 310
G G G+LGH + +L P+ V AL G + DVACG + LT +++WG
Sbjct: 4119 GKGRYGRLGH---SDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDG 4175
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWG 370
G+LG G +P + D+ + GV V CG ++ + G ++ WG
Sbjct: 4176 DYGKLGRG--GSDGCKVPMKIDS--------LTGLGVVKVECGSQFSVALTKSGAVYTWG 4225
Query: 371 YNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGH 407
Y + + + P V G +V +A G H
Sbjct: 4226 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4263
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 8/107 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG + G G + +R P+Q+ + + IA G H + DG
Sbjct: 4220 AVYTWGKGDYHRLGH-GSDDHVRRPRQVQ-------GLQGKKVIAIATGSLHCVCCSEDG 4271
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
++TWG N+ GQLGDGT + P V LQ + V ++CG+ T A
Sbjct: 4272 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4318
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 74/186 (39%), Gaps = 22/186 (11%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+TQ++C E +S NG VYT S L P+ V L I +A
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------------DTLAPQLVQGLASRNIVKIA 500
Query: 290 C--GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
G H AL + G +Y+WG G+LG G +P E V
Sbjct: 501 AHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPLEEPKVISAFSGKQAGKHV 554
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGG 406
+ACG +++ +G ++ WG +YG+ + S P V G +V +A G G
Sbjct: 555 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSG 614
Query: 407 HSAVLA 412
+ LA
Sbjct: 615 DAQTLA 620
>gi|73988984|ref|XP_542558.2| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
[Canis lupus familiaris]
Length = 531
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 141/304 (46%), Gaps = 39/304 (12%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V + +F +G N LG G + P+K++ L + +KS+S G+ ++ D
Sbjct: 37 VTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLST---ED 93
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQV---SCGSVHVVALSECGL 187
G + + WG N G+ + N +I QV +CGS H +AL+ G
Sbjct: 94 GVV-----YAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGE 148
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWGYN GQ+G G T PR + ++++ ++CG+ S AV +NG
Sbjct: 149 VFAWGYNNCGQVGSGSTTNQ-PTPRKVT-------NCLHIKRVVGIACGQTSSMAVLDNG 200
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
EVY WG GQLG L + +L P RV AL + + + CG H+ ALT +G LYAW
Sbjct: 201 EVYGWGYNGNGQLG---LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAW 257
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRI 366
G + GQLG G + S P + V++ AC +HT + G +
Sbjct: 258 GANTYGQLGTGNKNNLLS--PAHIMVEKERV--------VEIAACHSAHTSAAKTQGGHV 307
Query: 367 HGWG 370
+ WG
Sbjct: 308 YMWG 311
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 113/238 (47%), Gaps = 34/238 (14%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HV+ +E G++ AWG+N Y QLG G T +G+ +V ++++ +V+CG
Sbjct: 86 HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLL--------IKQVVEVACGS 137
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV---ACGGVH 294
+HS A++ +GEV+ WG + GQ+G S + PR+V + + IK V ACG
Sbjct: 138 HHSMALAADGEVFAWGYNNCGQVGS---GSTTNQPTPRKVT--NCLHIKRVVGIACGQTS 192
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG---VQLVA 351
S A+ G +Y WG + GQLGLG + P+ V V +
Sbjct: 193 SMAVLDNGEVYGWGYNGNGQLGLGNNGNQLT-------------PVRVAALHSVCVNQIV 239
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
CG++HTL +G ++ WG N+YGQ SP V + R + HSA
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLL--SPAHIMVEKERVVEIAACHSA 295
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 112/452 (24%), Positives = 177/452 (39%), Gaps = 69/452 (15%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG+N Q G G Q P Q+ C + +++ACG H+ A+A+DG
Sbjct: 95 VVYAWGHNGYSQLGN-GTTNQGIAPIQV------CTNLLIKQVVEVACGSHHSMALAADG 147
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+F WG N GQ+G G+ + P KV L + V I+CG + A+ + E G
Sbjct: 148 EVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYG--- 204
Query: 141 TSRLWVWGQN------QGSNFPRLFWGAFTPNTIIC--QVSCGSVHVVALSECGLLQAWG 192
WG N G+N +L +C Q+ CG H +AL++ GLL AWG
Sbjct: 205 ------WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G L ++ E E++ ++ +C H SAA ++ G VY
Sbjct: 259 ANTYGQLGTGNKNNLLSPAHIM----------VEKERVVEIAACHSAHTSAAKTQGGHVY 308
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC-GGVHSCALTSKGALYAWGG 309
W G C G +LP + +C V +C T +
Sbjct: 309 MW--------GQC---RGQSVVLPH---------LTHFSCTDDVFACFATPAVSWRLLSV 348
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFR-NIPILVVPNGVQLVACGHSHTLVYMRDGRIHG 368
L + + P +D FR + + V V + C H ++
Sbjct: 349 EHEDFLTVAESLKKEFDSPETADLKFRIDGKYIHVHKAVLKIRCEHFRSMFQSY------ 402
Query: 369 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL----AAGGGHSAVLADACSLKELCEFR 424
W + ++ +Y Y + + + + L A G A L++LC+
Sbjct: 403 WNEDMKEVIEIDQFSYPVYRAFLQYLYTDAVDLPPEDAIGLLDLATSYCENRLRKLCQHI 462
Query: 425 LAESVTLSNASEIEDVASRTGSEALARLCERL 456
+ +T+ NA + A R +E L C +
Sbjct: 463 IKRGITVENAFSLFSAAVRYDAEDLEEFCFKF 494
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 140/334 (41%), Gaps = 46/334 (13%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G +A + ++V+G N+S G G + +PK+L G + L
Sbjct: 26 VFGTSANEALYVTDNDEVFVFGLNYSNCLG-TGDNQSTLVPKKLEA-----LCGKKIKSL 79
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV-KQLQSEFVKSISCGAH 124
G H DG ++ WG N + QLG+GT P +V L + V ++CG+H
Sbjct: 80 SYGSG-PHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSH 138
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQ------GSN----FPRLFWGAFTPNTIICQVSC 174
+ A+A E ++ WG N GS PR ++ ++C
Sbjct: 139 HSMALAADGE---------VFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVV-GIAC 188
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G +A+ + G + WGYN GQLG G L RV A + Q+
Sbjct: 189 GQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRV---------AALHSVCVNQIV 239
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGG 292
CG H+ A+++ G +Y WG + GQLG +G+K L P ++ ++ AC
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLG-----TGNKNNLLSPAHIMVEKERVVEIAACHS 294
Query: 293 VH-SCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
H S A T G +Y WG + GQ + P FS
Sbjct: 295 AHTSAAKTQGGHVYMWGQCR-GQSVVLPHLTHFS 327
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 17/173 (9%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHSCALT 299
V++N EV+ +GL LG +GD + L+P+++ AL G IK ++ G G H T
Sbjct: 37 VTDNDEVFVFGLNYSNCLG-----TGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLST 91
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
G +YAWG + QLG G + + I ++ L++ V+ VACG H++
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTN--------LLIKQVVE-VACGSHHSMA 142
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
DG + WGYN+ GQ + +T P V C+ R + G ++ +A
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMA 195
>gi|255540989|ref|XP_002511559.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223550674|gb|EEF52161.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1028
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/278 (32%), Positives = 128/278 (46%), Gaps = 26/278 (9%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG + + TG G + +P E+ G + R ++CG HTAAV+S G
Sbjct: 371 LYTWG-DDTHNTGYLGHGSA--VSHWIPREVIG--QIESVRISFVSCGPWHTAAVSSQGK 425
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G FG LG G P +V+ L+ +SCG TAA+ + + TS
Sbjct: 426 LFTFGDGTFGALGHGDRSSTSKPREVESLKGLRTLKVSCGIWHTAAVIDFINESDRLDTS 485
Query: 143 ---RLWVWGQNQ------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
+L+ WG + G PRL + +CQV+C +AL+ G + G
Sbjct: 486 LSGKLFTWGAGERGQLGHGDEEPRLVPSCVSMPAGVCQVACAHSMTIALTVLGQVYTMGA 545
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
+YGQLG P + D I Q++CG +H A+S NG+VYTWG
Sbjct: 546 ADYGQLG---------SPCSVGKLPIHTDGDIRNCHIKQIACGSHHVVALSSNGDVYTWG 596
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
G GQLGH ++ D+ P V AL +K V CG
Sbjct: 597 KGINGQLGHGDIK--DRH-TPTLVKALKHKQVKSVVCG 631
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 156/372 (41%), Gaps = 63/372 (16%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
IACG +H V G +F+WG + G+LG G + P+ + L V ++CG T
Sbjct: 303 IACGSKHAVIVTKQGQIFSWGESSGGKLGHGADADVSQPKVIDALSESNVVLVACGEFHT 362
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSN------------FPRLFWGAFTPNTIICQVSC 174
A+ T+S L+ WG + + PR G + I VSC
Sbjct: 363 CAV--------TVS-GNLYTWGDDTHNTGYLGHGSAVSHWIPREVIGQIE-SVRISFVSC 412
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G H A+S G L +G +G LG G PR ++ + +VS
Sbjct: 413 GPWHTAAVSSQGKLFTFGDGTFGALGHGDR-SSTSKPREVESLKGL--------RTLKVS 463
Query: 235 CGEYHSAAV------------SENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVAL 280
CG +H+AAV S +G+++TWG G GQLGH GD+E L+P V
Sbjct: 464 CGIWHTAAVIDFINESDRLDTSLSGKLFTWGAGERGQLGH-----GDEEPRLVPSCVSMP 518
Query: 281 DGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI 340
G+ VAC + ALT G +Y G + GQLG S +P +D RN I
Sbjct: 519 AGVC--QVACAHSMTIALTVLGQVYTMGAADYGQLG---SPCSVGKLPIHTDGDIRNCHI 573
Query: 341 LVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVR 399
+ +ACG H + +G ++ WG GQ + P+ V +V+
Sbjct: 574 -------KQIACGSHHVVALSSNGDVYTWGKGINGQLGHGDIKDRHTPTLVKALKHKQVK 626
Query: 400 KLAAGGGHSAVL 411
+ G +AV+
Sbjct: 627 SVVCGSNFTAVI 638
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 152/364 (41%), Gaps = 72/364 (19%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
I+ WG + G+ G G + + PK + A + S + +ACG HT AV G
Sbjct: 319 IFSWGESSGGKLGH-GADADVSQPKVID-------ALSESNVVLVACGEFHTCAVTVSGN 370
Query: 83 LFTWG--ANEFGQLGDGTEEGRKHP-EKVKQLQSEFVKSISCGAHCTAAIAEPRE----N 135
L+TWG + G LG G+ P E + Q++S + +SCG TAA++ +
Sbjct: 371 LYTWGDDTHNTGYLGHGSAVSHWIPREVIGQIESVRISFVSCGPWHTAAVSSQGKLFTFG 430
Query: 136 DGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVAL------------S 183
DGT G ++ PR T+ +VSCG H A+ S
Sbjct: 431 DGTFGA---LGHGDRSSTSKPREVESLKGLRTL--KVSCGIWHTAAVIDFINESDRLDTS 485
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
G L WG E GQLG G + PR++ + QV+C + A+
Sbjct: 486 LSGKLFTWGAGERGQLGHGD-----EEPRLVPSCVSMP------AGVCQVACAHSMTIAL 534
Query: 244 SENGEVYTWGLGSVGQLGH-CSLQSGDKELLPRRVVALDGIF----IKDVACGGVHSCAL 298
+ G+VYT G GQLG CS+ LP + DG IK +ACG H AL
Sbjct: 535 TVLGQVYTMGAADYGQLGSPCSVGK-----LP---IHTDGDIRNCHIKQIACGSHHVVAL 586
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLVACGHS 355
+S G +Y WG GQLG G D R+ P LV V+ V CG +
Sbjct: 587 SSNGDVYTWGKGINGQLGHG-------------DIKDRHTPTLVKALKHKQVKSVVCGSN 633
Query: 356 HTLV 359
T V
Sbjct: 634 FTAV 637
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 20/148 (13%)
Query: 272 LLPR---RVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIP 328
LLP+ R+ ALD I ACG H+ +T +G +++WG S G+LG G
Sbjct: 287 LLPKALDRIAALDAQII---ACGSKHAVIVTKQGQIFSWGESSGGKLGHGA--------- 334
Query: 329 NESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY--GQAANEKSTYAW 386
++D + + + V LVACG HT G ++ WG +++ G + + W
Sbjct: 335 -DADVSQPKVIDALSESNVVLVACGEFHTCAVTVSGNLYTWGDDTHNTGYLGHGSAVSHW 393
Query: 387 YPSPVDWCVGEVRK--LAAGGGHSAVLA 412
P V + VR ++ G H+A ++
Sbjct: 394 IPREVIGQIESVRISFVSCGPWHTAAVS 421
>gi|395859036|ref|XP_003801852.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
[Otolemur garnettii]
Length = 531
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 149/366 (40%), Gaps = 81/366 (22%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G +A + ++V+G N+S G G + +PK+L G + L
Sbjct: 26 VFGTSASEALYVTDSDEVFVFGLNYSNCLG-TGDNQSTLVPKKLEA-----LCGKKIKSL 79
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
G H DG ++ WG N + QLG+GT P +V C
Sbjct: 80 SYGSG-PHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQV----------------C 122
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
T + + + +V+CGS H +AL+
Sbjct: 123 TNLLIKQ------------------------------------VVEVACGSHHSMALAAD 146
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + AWGYN GQ+G G T PR + ++++ ++CG+ S AV +
Sbjct: 147 GEVFAWGYNNCGQVGSGSTANQ-PTPRKVT-------NCLHIKRVVGIACGQTSSMAVLD 198
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
NGEVY WG GQLG L + +L P RV AL + + + CG H+ ALT +G LY
Sbjct: 199 NGEVYGWGYNGNGQLG---LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLY 255
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDG 364
AWG + GQLG G + S P I V++ AC +HT + G
Sbjct: 256 AWGANTYGQLGTGNKNNLLS--PAHIMVEKERI--------VEIAACHSAHTSAAKTQGG 305
Query: 365 RIHGWG 370
++ WG
Sbjct: 306 HVYMWG 311
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 114/238 (47%), Gaps = 34/238 (14%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HV+ +E G++ AWG+N Y QLG G T +G+ +V ++++ +V+CG
Sbjct: 86 HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLL--------IKQVVEVACGS 137
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV---ACGGVH 294
+HS A++ +GEV+ WG + GQ+G S + + PR+V + + IK V ACG
Sbjct: 138 HHSMALAADGEVFAWGYNNCGQVGSGSTAN---QPTPRKVT--NCLHIKRVVGIACGQTS 192
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG---VQLVA 351
S A+ G +Y WG + GQLGLG + P+ V V +
Sbjct: 193 SMAVLDNGEVYGWGYNGNGQLGLGNNGNQLT-------------PVRVAALHSVCVNQIV 239
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
CG++HTL +G ++ WG N+YGQ SP V + R + HSA
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLL--SPAHIMVEKERIVEIAACHSA 295
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 17/173 (9%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHSCALT 299
V+++ EV+ +GL LG +GD + L+P+++ AL G IK ++ G G H T
Sbjct: 37 VTDSDEVFVFGLNYSNCLG-----TGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLST 91
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
G +YAWG + QLG G + + I ++ L++ V+ VACG H++
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTN--------LLIKQVVE-VACGSHHSMA 142
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
DG + WGYN+ GQ + + P V C+ R + G ++ +A
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMA 195
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 20/151 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WGYN +GQ G QL P ++ C I CG+ HT A+ +G
Sbjct: 202 VYGWGYNGNGQLGLGNNGNQLT-PVRVAALHSVCVN-------QIVCGYAHTLALTDEGL 253
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
L+ WGAN +GQLG G + P + + V+ +C AH +AA +
Sbjct: 254 LYAWGANTYGQLGTGNKNNLLSPAHIMVEKERIVEIAACHSAHTSAAKTQG--------- 304
Query: 142 SRLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 305 GHVYMWGQCRGQSVVLPHLTHFSCTDDVFAC 335
>gi|440798633|gb|ELR19700.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein, partial [Acanthamoeba castellanii
str. Neff]
Length = 872
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 121/462 (26%), Positives = 182/462 (39%), Gaps = 96/462 (20%)
Query: 63 RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRK--HPEKVKQLQSEFVKSIS 120
R +ACG +H+ AV G ++ WG + GQLG+G + P +V+ L+ E V +
Sbjct: 30 RIRSVACGEQHSMAVGETGDVYVWGRAKEGQLGNGERKAANALKPVRVEGLRHERVVAGV 89
Query: 121 CG-AHCTAAIA---------EPRENDGTISTSRLWVWGQNQGSNFPRLF----------- 159
CG HC A + +G+ + + G N R+
Sbjct: 90 CGYNHCLAVTVGGKLYQWGMLHKHVEGSANKEYFGMAIGLSGLNSDRMKRMVGRSHSTYY 149
Query: 160 -----------------WGAFTPNT-------------IICQVSCGSVHVVALSECGLLQ 189
+G+FTP T + +V+ G +A++ G +
Sbjct: 150 AAGATGEELEELSRVQNFGSFTPYTQPSPEVVTGLQHVKVVEVAAGYSFSLAVTSQGEVY 209
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE--KITQVSCGEYHSAAVSENG 247
+WG+NE QLG G P+++ P L+ I +CG+ HS +S G
Sbjct: 210 SWGFNEKCQLGLGHRYNQ-SVPQLV----------PHLQGVHIVSATCGQQHSVLLSAAG 258
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL---------DGIFIKDVACGGVHSCAL 298
VYT+GLG GQLGH E PRRV AL G I +ACG H+ AL
Sbjct: 259 HVYTFGLGVFGQLGHG---VSSDERFPRRVEALVPAEEGVESAGERIVQIACGSHHTLAL 315
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG---------VQL 349
G ++ WG ++ GQ G T ++ I P +
Sbjct: 316 GVSGTVWTWGSAEYGQQG---GTNAYEDWATGQRAEKSAAMICATPRSLSGCFDGKHIAH 372
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHS 408
V+CGH H L RDG ++ WG+ SYG + + P + GE + + AAG HS
Sbjct: 373 VSCGHLHNLATARDGSVYSWGWGSYGVLGHGNHRFQLVPKLIRRIGGERIVQTAAGAKHS 432
Query: 409 AVLADACSLKELCEFRLAESVTLSNASEIEDVASRTGSEALA 450
+ S +F++A N DV+ R + A
Sbjct: 433 LAVNAGSSTLFAFDFKVA-----LNNPRYSDVSFRVDGKTFA 469
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 110/262 (41%), Gaps = 61/262 (23%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ ++ +Y WG+N Q G R Q +P QL P L G + CG +H+
Sbjct: 202 VTSQGEVYSWGFNEKCQLGLGHRYNQ-SVP-QLVPHLQGV------HIVSATCGQQHSVL 253
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQL---------QSEFVKSISCGAHCTA 127
+++ G ++T+G FGQLG G + P +V+ L E + I+CG+H T
Sbjct: 254 LSAAGHVYTFGLGVFGQLGHGVSSDERFPRRVEALVPAEEGVESAGERIVQIACGSHHTL 313
Query: 128 AIAEPRENDGTISTSRLWVW-----GQNQGSN--------------------FPRLFWGA 162
A+ GT+ W W GQ G+N PR G
Sbjct: 314 ALG----VSGTV-----WTWGSAEYGQQGGTNAYEDWATGQRAEKSAAMICATPRSLSGC 364
Query: 163 FTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLD 222
F I VSCG +H +A + G + +WG+ YG LG G L P++I+
Sbjct: 365 FD-GKHIAHVSCGHLHNLATARDGSVYSWGWGSYGVLGHGNHRFQLV-PKLIRRIGG--- 419
Query: 223 EAPELEKITQVSCGEYHSAAVS 244
E+I Q + G HS AV+
Sbjct: 420 -----ERIVQTAAGAKHSLAVN 436
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 75/188 (39%), Gaps = 45/188 (23%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
++I V+CGE HS AV E G+VY WG GQLG+ ++ + L P RV L +
Sbjct: 29 KRIRSVACGEQHSMAVGETGDVYVWGRAKEGQLGNGERKAANA-LKPVRVEGLRHERVVA 87
Query: 288 VACGGVHSCALTSKGALYAWG---------------GSQAGQLGLGPQTRSFSLIPNESD 332
CG H A+T G LY WG G G GL R ++
Sbjct: 88 GVCGYNHCLAVTVGGKLYQWGMLHKHVEGSANKEYFGMAIGLSGLN-SDRMKRMVGRSHS 146
Query: 333 TYF---------------RNI--------PILVVPNGVQL-----VACGHSHTLVYMRDG 364
TY+ +N P V G+Q VA G+S +L G
Sbjct: 147 TYYAAGATGEELEELSRVQNFGSFTPYTQPSPEVVTGLQHVKVVEVAAGYSFSLAVTSQG 206
Query: 365 RIHGWGYN 372
++ WG+N
Sbjct: 207 EVYSWGFN 214
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 10/118 (8%)
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G G VG+LG + + + L P + G I+ VACG HS A+ G +Y WG ++
Sbjct: 1 GTGKVGELG--AGRDNKEALEPILLERFRGKRIRSVACGEQHSMAVGETGDVYVWGRAKE 58
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWG 370
GQLG G + + +L P + R+ ++ GV CG++H L G+++ WG
Sbjct: 59 GQLGNGERKAANALKPVRVEG-LRHERVVA---GV----CGYNHCLAVTVGGKLYQWG 108
>gi|115461450|ref|NP_001054325.1| Os04g0686200 [Oryza sativa Japonica Group]
gi|38345822|emb|CAD41927.2| OSJNBa0070M12.5 [Oryza sativa Japonica Group]
gi|113565896|dbj|BAF16239.1| Os04g0686200 [Oryza sativa Japonica Group]
gi|222629813|gb|EEE61945.1| hypothetical protein OsJ_16701 [Oryza sativa Japonica Group]
Length = 1057
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 119/416 (28%), Positives = 172/416 (41%), Gaps = 62/416 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDI---ACGHEHTAAVAS 79
+YVWG T R+G + L P +N LD+ ACG +H A V
Sbjct: 220 VYVWGEVMCDTTCRQGSDSNAYSATAATDILVPKPLESNV-MLDVSYVACGVKHAALVTR 278
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
+FTWG G+LG G P V+ L V++I+CG T AI
Sbjct: 279 QAEVFTWGEECSGRLGHGAGTSIFQPRLVESLSICNVETIACGEFHTCAIT--------- 329
Query: 140 STSRLWVWGQ--------NQGSN----FPRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
+T L+ WG GSN P+ G + VSCG+ H ++ G
Sbjct: 330 ATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLE-GLQVSAVSCGTWHTALITSSGK 388
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE-- 245
L +G +G LG G R Y K ++ L I+ VSCG +H+AAV E
Sbjct: 389 LYTFGDGTFGVLG--------HGNRETISYPKEVESLKGLRTIS-VSCGVWHTAAVVEVI 439
Query: 246 -------NGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVHSC 296
+G+++TWG G +LGH GD+ +L P V +L CG +
Sbjct: 440 MAQSNTSSGKLFTWGDGDKYRLGH-----GDRSSKLKPTCVPSLIDYNFHKAVCGHTLTI 494
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
LT+ G ++ G S GQLG PN Y R + + GV VACG H
Sbjct: 495 GLTTSGHIFTAGSSVYGQLG----------NPNNDGRYPRLVEEKLGGGGVVEVACGAYH 544
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 411
V + G ++ WG + G+ + P+ V+ V+++A G G +A +
Sbjct: 545 VAVLTQSGEVYTWGKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACGSGFTAAI 600
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 142/308 (46%), Gaps = 35/308 (11%)
Query: 17 IPAKSAIYVWG--YNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHT 74
I A +Y WG +++G G G IPK++ L G A ++CG HT
Sbjct: 328 ITATGDLYTWGDGTHNAGLLGH-GSNVSHWIPKRVSGPLEGLQVSA------VSCGTWHT 380
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
A + S G L+T+G FG LG G E +P++V+ L+ S+SCG TAA+ E
Sbjct: 381 ALITSSGKLYTFGDGTFGVLGHGNRETISYPKEVESLKGLRTISVSCGVWHTAAVVEVIM 440
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTIICQVS-------CGSVHVVALS 183
S+ +L+ WG G + RL G P + + CG + L+
Sbjct: 441 AQSNTSSGKLFTWG--DGDKY-RLGHGDRSSKLKPTCVPSLIDYNFHKAVCGHTLTIGLT 497
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
G + G + YGQLG P Y + ++E + +V+CG YH A +
Sbjct: 498 TSGHIFTAGSSVYGQLG---------NPNNDGRYPRLVEEKLGGGGVVEVACGAYHVAVL 548
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++GEVYTWG G+ G+LGH + D++ P V AL +K +ACG + A+ +
Sbjct: 549 TQSGEVYTWGKGANGRLGHGDI--ADRK-TPTFVEALRDRSVKRIACGSGFTAAICQHKS 605
Query: 304 LYAWGGSQ 311
+ SQ
Sbjct: 606 VSGMEQSQ 613
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 61/126 (48%), Gaps = 12/126 (9%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
+++ACG H A + G ++TWG G+LG G RK P V+ L+ VK I+CG+
Sbjct: 536 VEVACGAYHVAVLTQSGEVYTWGKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACGSG 595
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
TAAI + + G Q+Q S+ + F FT C +CG VH + S
Sbjct: 596 FTAAICQHKSVSG---------MEQSQCSSCRQPF--GFTRKRHNC-YNCGLVHCHSCSS 643
Query: 185 CGLLQA 190
L+A
Sbjct: 644 KKALRA 649
>gi|334330728|ref|XP_001378629.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Monodelphis
domestica]
Length = 531
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 143/304 (47%), Gaps = 39/304 (12%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V + +F +G N LG G + P+K++ L + +KS+S G+ ++ D
Sbjct: 37 VTHNDEVFVFGLNCSNCLGTGDNQSTIVPKKLEALCGKKIKSLSYGSGPHVLLST---ED 93
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQV---SCGSVHVVALSECGL 187
G + + WG N G+ + N +I QV +CGS H +AL+ G
Sbjct: 94 GMV-----YAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVIEVACGSHHSMALAADGE 148
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWGYN GQ+G G T PR + ++++ ++CG+ S AV +NG
Sbjct: 149 VYAWGYNNCGQVGSGSTANQ-PTPRKVT-------NCLHIKRVVSIACGQTSSMAVLDNG 200
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
EVY WG GQLG L + +L P RV AL + + + CG H+ ALT +G LYAW
Sbjct: 201 EVYGWGYNGNGQLG---LGNNGNQLTPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAW 257
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRI 366
G + GQLG G ++ S P + + V++ AC +HT + G +
Sbjct: 258 GANTYGQLGTGNKSNLLS--PAQIMVEKERV--------VEIAACHSAHTSAAKTQGGHV 307
Query: 367 HGWG 370
+ WG
Sbjct: 308 YMWG 311
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 114/234 (48%), Gaps = 26/234 (11%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HV+ +E G++ AWG+N Y QLG G T +G+ +V ++++ +V+CG
Sbjct: 86 HVLLSTEDGMVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLL--------IKQVIEVACGS 137
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHSC 296
+HS A++ +GEVY WG + GQ+G S + PR+V L + +ACG S
Sbjct: 138 HHSMALAADGEVYAWGYNNCGQVGS---GSTANQPTPRKVTNCLHIKRVVSIACGQTSSM 194
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G +Y WG + GQLGLG L P ++ +L + CG++H
Sbjct: 195 AVLDNGEVYGWGYNGNGQLGLGNNGNQ--LTPCRVAA-LHSVCVL-------QIVCGYAH 244
Query: 357 TLVYMRDGRIHGWGYNSYGQAAN-EKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
TL +G ++ WG N+YGQ KS SP V + R + HSA
Sbjct: 245 TLALTDEGLLYAWGANTYGQLGTGNKSNLL---SPAQIMVEKERVVEIAACHSA 295
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 115/456 (25%), Positives = 181/456 (39%), Gaps = 79/456 (17%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG+N Q G G Q P Q+ L + +++ACG H+ A+A+DG
Sbjct: 96 VYAWGHNGYSQLGN-GTTNQGIAPIQVCTNLL------IKQVIEVACGSHHSMALAADGE 148
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
++ WG N GQ+G G+ + P KV L + V SI+CG + A+ + E G
Sbjct: 149 VYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYG---- 204
Query: 142 SRLWVWGQN------QGSNFPRLFWGAFTP-------NTIICQVSCGSVHVVALSECGLL 188
WG N G+N +L TP + + Q+ CG H +AL++ GLL
Sbjct: 205 -----WGYNGNGQLGLGNNGNQL-----TPCRVAALHSVCVLQIVCGYAHTLALTDEGLL 254
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSEN 246
AWG N YGQLG G L +++ E E++ ++ +C H SAA ++
Sbjct: 255 YAWGANTYGQLGTGNKSNLLSPAQIM----------VEKERVVEIAACHSAHTSAAKTQG 304
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC-GGVHSCALTSKGALY 305
G VY W G C G +LP + +C V +C T
Sbjct: 305 GHVYMW--------GQC---RGQSVILPH---------LTHFSCTDDVFACFATPAVTWR 344
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFR-NIPILVVPNGVQLVACGHSHTLVYMRDG 364
L + + P+ +D FR + + V V + C H T+
Sbjct: 345 LLSVEHEDFLTVAESLKKEFDSPDTADLKFRVDGKYIHVHKAVLKIRCEHFRTMFQSY-- 402
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL----AAGGGHSAVLADACSLKEL 420
W + ++ +Y Y + + + + L A G A LK+L
Sbjct: 403 ----WNEDMKEVIEIDQFSYPVYCAFLQYLYTDTVDLPPEDAIGLLDLATSYCENRLKKL 458
Query: 421 CEFRLAESVTLSNASEIEDVASRTGSEALARLCERL 456
C+ + +T+ NA + A R +E L C +
Sbjct: 459 CQHIIKRGITVENAFSLLSAAVRYDAEDLEEFCFKF 494
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 17/173 (9%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHSCALT 299
V+ N EV+ +GL LG +GD + ++P+++ AL G IK ++ G G H T
Sbjct: 37 VTHNDEVFVFGLNCSNCLG-----TGDNQSTIVPKKLEALCGKKIKSLSYGSGPHVLLST 91
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
G +YAWG + QLG G + + I ++ + V VACG H++
Sbjct: 92 EDGMVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQ---------VIEVACGSHHSMA 142
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
DG ++ WGYN+ GQ + + P V C+ R ++ G ++ +A
Sbjct: 143 LAADGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMA 195
>gi|326496164|dbj|BAJ90703.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 907
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 117/418 (27%), Positives = 171/418 (40%), Gaps = 66/418 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLR--------IPKQLPPELFGCPAGANSRWLDI---ACGH 71
+YVWG + R + +R +PK L L LD+ CG
Sbjct: 37 VYVWGEVVCDNSARTSSDTVIRSTGKTDFLLPKPLESNLV----------LDVYHVDCGV 86
Query: 72 EHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
H + V +G +FTWG + G+LG GT E HP V+ L + + ++CG T A+
Sbjct: 87 RHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAASNIDFVACGEFHTCAVTT 146
Query: 132 PRE----NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
E DGT + L G + G PR G I VSCG+ H ++ G
Sbjct: 147 TGELYTWGDGTHNVG-LLGHGTDVGHWIPRRISGPL-EGLQIAYVSCGTWHTALITSMGQ 204
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE-- 245
L +G +G LG G + + PR ++ + K V+CG +H+AA+ E
Sbjct: 205 LFTFGDGSFGVLGHG-NVKSISCPREVESLSGL--------KTIAVACGVWHTAAIVEVI 255
Query: 246 ---------NGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVH 294
G+++TWG G +LGH GDKE L P V +L VACG
Sbjct: 256 VTQSSATVSAGKLFTWGDGDKHRLGH-----GDKEARLKPTCVASLIDYDFYRVACGHSL 310
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGH 354
+ LT+ G ++ G S GQLG PN SD + + V +ACG
Sbjct: 311 TVGLTTSGKVWTMGNSVYGQLG----------NPN-SDGRPCLVEDKIASEHVLQIACGS 359
Query: 355 SHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 411
H V + WG + G+ + P+ V+ VR +A G +A +
Sbjct: 360 YHVAVLTSRSEVFTWGKGANGRLGHGDVEDRKVPTTVEALRDRAVRHIACGANFTAAI 417
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 124/300 (41%), Gaps = 64/300 (21%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++CG HTA + S G LFT+G FG LG G + P +V+ L +++CG T
Sbjct: 189 VSCGTWHTALITSMGQLFTFGDGSFGVLGHGNVKSISCPREVESLSGLKTIAVACGVWHT 248
Query: 127 AAIAEP--RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIIC--------QVSCGS 176
AAI E ++ T+S +L+ WG A T + +V+CG
Sbjct: 249 AAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFYRVACGH 308
Query: 177 VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG 236
V L+ G + G + YGQLG + G +++ E + Q++CG
Sbjct: 309 SLTVGLTTSGKVWTMGNSVYGQLGNPNS----------DGRPCLVEDKIASEHVLQIACG 358
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG---- 292
YH A ++ EV+TWG G+ G+LGH ++ D+++ P V AL ++ +ACG
Sbjct: 359 SYHVAVLTSRSEVFTWGKGANGRLGHGDVE--DRKV-PTTVEALRDRAVRHIACGANFTA 415
Query: 293 -------------------------------------VHSCALTSKGALYAWGGSQAGQL 315
VH A TS+ AL A G+L
Sbjct: 416 AICLHKWVSGADQSQCSSCRQPFGFTRKRHNCYNCGLVHCNACTSRKALRAALAPNPGKL 475
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 69/144 (47%), Gaps = 16/144 (11%)
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
A+ L IACG H A + S +FTWG G+LG G E RK P V+ L+ V+ I
Sbjct: 348 ASEHVLQIACGSYHVAVLTSRSEVFTWGKGANGRLGHGDVEDRKVPTTVEALRDRAVRHI 407
Query: 120 SCGAHCTAAIAEPRENDGTISTSRLWVWG--QNQGSNFPRLFWGAFTPNTIICQVSCGSV 177
+CGA+ TAAI + WV G Q+Q S+ + F FT C +CG V
Sbjct: 408 ACGANFTAAICLHK-----------WVSGADQSQCSSCRQPF--GFTRKRHNC-YNCGLV 453
Query: 178 HVVALSECGLLQAWGYNEYGQLGR 201
H A + L+A G+L R
Sbjct: 454 HCNACTSRKALRAALAPNPGKLHR 477
>gi|281354478|gb|EFB30062.1| hypothetical protein PANDA_019422 [Ailuropoda melanoleuca]
Length = 4814
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 176/411 (42%), Gaps = 67/411 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
++ ++VWG N Q G L+ K P + N + +A G + AV
Sbjct: 2936 RTKVFVWGLNDKDQLG------GLKGSKIKVPSFSETLSALNV--VQVAGGSKSLFAVTV 2987
Query: 80 DGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPREN 135
+G ++ G G+LG G G P ++ L S VK ++ G H TA
Sbjct: 2988 EGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV----- 3042
Query: 136 DGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
DG +++ WG+ PRL T I ++CGS H AL+
Sbjct: 3043 DG-----KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSS 3095
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGP--RVIKGYAKFLDEAPELEKITQVSCG--EYHSA 241
G L WG EYG+LG G L+ +V+ G+ ++ QV+CG + +
Sbjct: 3096 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-----------RVIQVACGSRDAQTL 3144
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A+++ G V++WG G G+LG + + +P+ + L+G + + CG S ALT
Sbjct: 3145 ALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTKS 3201
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLV 359
G ++ WG +LG G SD + R ++ G ++V A G H L
Sbjct: 3202 GVVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3249
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
G+++ WG N +GQ N +T P+ V G+ + ++A G HS
Sbjct: 3250 VTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3300
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 134/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3046 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 3097
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 3098 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 3150
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 3151 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3207
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV++ G+VY
Sbjct: 3208 GKGDYFRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDAGQVYA 3258
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3259 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3304
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 2985 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQI-----TALSSYVVKKVAVHSGGRHATA 3039
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+
Sbjct: 3040 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------ 3093
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 3094 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3147
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 3148 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 3198
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH S K P+ V L G I VA G +H A+T G
Sbjct: 3199 TKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDAGQ 3255
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 3256 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3302
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 144/327 (44%), Gaps = 50/327 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +D+A G H+A V + G
Sbjct: 4040 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRGIEV--VDVAAGGAHSACVTAAGD 4091
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG E + P+ V+ LQ V ++CG+ + +D T+
Sbjct: 4092 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLC--LTDDDTV--- 4146
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 4147 --WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4204
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 4205 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4255
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G + VACG H+ AW S+
Sbjct: 4256 NDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAWSTSKPAS 4303
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPIL 341
G P + +P E + + + IPI+
Sbjct: 4304 AGKLP-----AQVPMEYN-HLQEIPII 4324
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 129/276 (46%), Gaps = 25/276 (9%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N + P+L G + N I H +AL+ G + +WG + G+LG G
Sbjct: 449 RVYTQAYNSDTLAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG 508
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P+VI ++ + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 509 DTVP-LEEPKVISAFSG----KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 563
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + E +P V L G+ + DVACG + A+T G +++WG G+LG G
Sbjct: 564 ---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 620
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D V V CG ++ +DG+++ WG +
Sbjct: 621 DGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 668
Query: 379 NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ + YP ++ G +V +AAG H L +
Sbjct: 669 HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 704
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 174/411 (42%), Gaps = 76/411 (18%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P C A A R + + G + AV +DG
Sbjct: 3934 IYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALATLRPVQLIGGEQTLFAVTADG 3984
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 3985 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE------- 4037
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG+ + PR+ + V+ G H ++ G L
Sbjct: 4038 ---GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAGDL 4092
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSEN 246
WG YG+LG + + L+ P+++ EA + ++ V+C G+ + ++++
Sbjct: 4093 YTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVVDVACGSGDAQTLCLTDD 4143
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4144 DTVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 4200
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTL 358
WG +LG G SD + R P VQ +A G H +
Sbjct: 4201 WGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCV 4242
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
DG ++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4243 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4293
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 124/253 (49%), Gaps = 30/253 (11%)
Query: 134 ENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N +GS + + QV+ GS + A++
Sbjct: 2930 ESAATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2988
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + A G G+LG GI+ + PR I + ++ K V G H+ A++
Sbjct: 2989 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYV------VKKVAVHSGGRHATALTV 3042
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS ALTS G LY
Sbjct: 3043 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELY 3099
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRD 363
WG + G+LG G T L P + + +L+ +Q VACG + TL +
Sbjct: 3100 TWGLGEYGRLGHGDNTT--QLKP-------KMVKVLLGHRVIQ-VACGSRDAQTLALTDE 3149
Query: 364 GRIHGWGYNSYGQ 376
G + WG +G+
Sbjct: 3150 GLVFSWGDGDFGK 3162
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 134/310 (43%), Gaps = 53/310 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHC 125
+ G +H A++S+G +++WG E G+LG G P ++ L+ E V + GAH
Sbjct: 4024 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4083
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCG 175
A L+ WG+ + P+L A + ++ V+CG
Sbjct: 4084 ACVTA----------AGDLYTWGKGRYGRLGHSDSEDQLKPKLV-EALQGHRVV-DVACG 4131
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + L++ + +WG +YG+LGRG +G + P I + +V
Sbjct: 4132 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVKV 4182
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G VYTWG G +LGH S D PR+V L G + +A G +
Sbjct: 4183 ECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSL 4239
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLV 350
H T G +Y WG + GQLG G T P LV V V
Sbjct: 4240 HCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRV 4286
Query: 351 ACGHSHTLVY 360
ACG +HTL +
Sbjct: 4287 ACGSAHTLAW 4296
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 45/285 (15%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+L A N + H A+A+ G +++WG + G+LG G + P+ +
Sbjct: 460 LAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVI 519
Query: 109 KQLQ----SEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT 164
+ V I+CG+ +AAI E L+ WG+ N+ RL G+
Sbjct: 520 SAFSGKQAGKHVVHIACGSTYSAAITAEGE---------LYTWGRG---NYGRLGHGSSE 567
Query: 165 PNTI-----------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
I + V+CGS +A++E G + +WG +YG+LGRG +G + P
Sbjct: 568 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTP 626
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
++I+ + +V CG S A++++G+VY+WG G +LGH G +E
Sbjct: 627 KLIEKLQDL--------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH-----GTEE 673
Query: 272 LL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ P+ + L G + DVA G H ALT +++WG + Q
Sbjct: 674 HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 718
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 136/293 (46%), Gaps = 33/293 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG G+ G G L PK + G AG + + IACG ++AA
Sbjct: 488 LAATGEVYSWGCGDGGRLGH-GDTVPLEEPKVIS-AFSGKQAGKHV--VHIACGSTYSAA 543
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E P V L+ V ++CG+ +A
Sbjct: 544 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA------ 597
Query: 137 GTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
++W WG R G TP I + +V CGS +AL++ G +
Sbjct: 598 -VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQV 656
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG + +LG G T E ++ P++++G + +K+ V+ G H A++E+ E
Sbjct: 657 YSWGKGDNQRLGHG-TEEHVRYPKLLEGL--------QGKKVIDVAAGSTHCLALTEDSE 707
Query: 249 VYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
V++W GS Q H +L+ E P + LD I +ACG S A +S
Sbjct: 708 VHSW--GSNDQCQHFDTLRVTKPE--PAALPGLDTKHIVGIACGPAQSFAWSS 756
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 139/340 (40%), Gaps = 63/340 (18%)
Query: 56 CPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
C AN IAC + ++ +G ++T N P+ V+ L S
Sbjct: 423 CEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRN 472
Query: 116 VKSISCGA--HCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAF 163
+ I+ + H A+A +T ++ WG G P++ AF
Sbjct: 473 IIKIAAHSDGHHYLALA---------ATGEVYSWGCGDGGRLGHGDTVPLEEPKVI-SAF 522
Query: 164 TPNTI---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF 220
+ + ++CGS + A++ G L WG YG+LG G + E P ++ G
Sbjct: 523 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-SSEDEAIPMLVAGLKGL 581
Query: 221 LDEAPELEKITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
K+ V+CG + + AV+ENG+V++WG G G+LG D P+ +
Sbjct: 582 --------KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR---GGSDGCKTPKLIE 630
Query: 279 ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
L + + V CG S ALT G +Y+WG +LG G ++ + R
Sbjct: 631 KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG------------TEEHVRYP 678
Query: 339 PILVVPNGVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+L G ++ VA G +H L D +H WG N Q
Sbjct: 679 KLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 718
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 110/281 (39%), Gaps = 69/281 (24%)
Query: 186 GLLQAWGYNEYGQLGRGI---------TCEGLQGPRVIK--------------------G 216
G + WG+N GQLG GI CE L R ++ G
Sbjct: 3932 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3990
Query: 217 Y----------AKFLDEAPELEKITQ-------VSCGEYHSAAVSENGEVYTWGLGSVGQ 259
Y + + LE I V+ G H A+S GEVY+WG G+
Sbjct: 3991 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4050
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LGH + D+ PR + +L GI + DVA GG HS +T+ G LY WG + G+LG
Sbjct: 4051 LGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG--- 4104
Query: 320 QTRSFSLIPNESDTYFRNIPILVVP---NGVQLVAC--GHSHTLVYMRDGRIHGWGYNSY 374
SD+ + P LV + V VAC G + TL D + WG Y
Sbjct: 4105 ----------HSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDY 4154
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADA 414
G+ S P +D G V K+ G S L +
Sbjct: 4155 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4195
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG + G G + +R P+Q+ + + IA G H DG
Sbjct: 4197 AVYTWGKGDYHRLGH-GSDDHVRRPRQVQ-------GLQGKKVIAIATGSLHCVCCTEDG 4248
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
++TWG N+ GQLGDGT + P V LQ + V ++CG+ T A
Sbjct: 4249 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4295
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 74/186 (39%), Gaps = 22/186 (11%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+TQ++C E +S NG VYT S L P+ V L I +A
Sbjct: 431 VTQIACAEKRFLILSRNGRVYTQAYNS-------------DTLAPQLVQGLASRNIIKIA 477
Query: 290 C--GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
G H AL + G +Y+WG G+LG G +P E V
Sbjct: 478 AHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPLEEPKVISAFSGKQAGKHV 531
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGG 406
+ACG +++ +G ++ WG +YG+ + S P V G +V +A G G
Sbjct: 532 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSG 591
Query: 407 HSAVLA 412
+ LA
Sbjct: 592 DAQTLA 597
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 82/218 (37%), Gaps = 62/218 (28%)
Query: 246 NGEVYTWGLGSVGQLG--------------------HCSLQSGDKELL------------ 273
+G +Y WG GQLG L G++ L
Sbjct: 3931 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3990
Query: 274 -----------------PRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWGGSQAGQ 314
P + ++ +FIK VA GG H AL+S+G +Y+WG ++ G+
Sbjct: 3991 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4050
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LG G RS P ++ R I ++ VA G +H+ G ++ WG Y
Sbjct: 4051 LGHG--NRSPCDRPRVIES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRY 4100
Query: 375 GQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
G+ + S P V+ G V +A G G + L
Sbjct: 4101 GRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTL 4138
>gi|431911480|gb|ELK13686.1| Putative E3 ubiquitin-protein ligase HERC5 [Pteropus alecto]
Length = 923
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/258 (32%), Positives = 122/258 (47%), Gaps = 39/258 (15%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I Q++CG H +ALS+ G L AWG N +GQLG G + P++++ L P
Sbjct: 38 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGKIFDSTTAPQIVEH----LSGVP--- 90
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
+ Q+S G+ HS A+S +G +Y+WG GQLG L D + P + AL+ ++ +
Sbjct: 91 -LAQISAGKSHSMALSVSGNIYSWGRNDFGQLG---LGHTDDKDFPSLIEALENQKVEFL 146
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---N 345
ACGG H+ LT G ++ +G + GQLG N + R P LV N
Sbjct: 147 ACGGSHTALLTKDGLVFTFGAGKYGQLG-----------HNSTQNELR--PCLVTKLAGN 193
Query: 346 GVQLVACGHSHTLVYMRD-GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRK---- 400
V VACG HTL Y+ D G++ +G GQ N + P P+ E K
Sbjct: 194 RVTQVACGRQHTLAYVSDLGKVFSFGSGEEGQLGNGGTHNQLIPLPMKLPSNEELKFENR 253
Query: 401 -------LAAGGGHSAVL 411
+ AGG S +L
Sbjct: 254 TSEKELIIIAGGNQSILL 271
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 101/207 (48%), Gaps = 15/207 (7%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+ I Q++CG+YHS A+S+ GE++ WG GQLG + D P+ V L G+ +
Sbjct: 36 KNIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGKI--FDSTTAPQIVEHLSGVPLAQ 93
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
++ G HS AL+ G +Y+WG + GQLGLG + D F ++ + V
Sbjct: 94 ISAGKSHSMALSVSGNIYSWGRNDFGQLGLG----------HTDDKDFPSLIEALENQKV 143
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGG 406
+ +ACG SHT + +DG + +G YGQ + + P V G V ++A G
Sbjct: 144 EFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPCLVTKLAGNRVTQVACGRQ 203
Query: 407 HSAVLADACSLKELCEFRLAESVTLSN 433
H+ LA L ++ F E L N
Sbjct: 204 HT--LAYVSDLGKVFSFGSGEEGQLGN 228
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 98/210 (46%), Gaps = 32/210 (15%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDG-TEEGRKHPEKVKQLQSEFVKSISCGA 123
+ I CG H+ A++ G LF WG N GQLG G + P+ V+ L + IS G
Sbjct: 39 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGKIFDSTTAPQIVEHLSGVPLAQISAGK 98
Query: 124 HCTAAIAEPRENDGTISTSRLWVWGQN----------QGSNFPRLFWGAFTPNTIICQVS 173
+ A++ + ++ WG+N +FP L N + ++
Sbjct: 99 SHSMALS---------VSGNIYSWGRNDFGQLGLGHTDDKDFPSLIEAL--ENQKVEFLA 147
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
CG H L++ GL+ +G +YGQLG T L+ V K ++TQV
Sbjct: 148 CGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPCLVTKLAGN---------RVTQV 198
Query: 234 SCGEYHSAA-VSENGEVYTWGLGSVGQLGH 262
+CG H+ A VS+ G+V+++G G GQLG+
Sbjct: 199 ACGRQHTLAYVSDLGKVFSFGSGEEGQLGN 228
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 89/184 (48%), Gaps = 15/184 (8%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G G+ Q+ L G P I+ G H+ A++ G
Sbjct: 57 LFAWGQNLHGQLGV-GKIFDSTTAPQIVEHLSGVPLA------QISAGKSHSMALSVSGN 109
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+++WG N+FGQLG G + + P ++ L+++ V+ ++CG TA + + DG + T
Sbjct: 110 IYSWGRNDFGQLGLGHTDDKDFPSLIEALENQKVEFLACGGSHTALLTK----DGLVFTF 165
Query: 143 RLWVWGQ---NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYNEYGQ 198
+GQ N N R + QV+CG H +A +S+ G + ++G E GQ
Sbjct: 166 GAGKYGQLGHNSTQNELRPCLVTKLAGNRVTQVACGRQHTLAYVSDLGKVFSFGSGEEGQ 225
Query: 199 LGRG 202
LG G
Sbjct: 226 LGNG 229
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD-G 81
++ +G GQ G + +LR P L AG +R +ACG +HT A SD G
Sbjct: 162 VFTFGAGKYGQLGHNSTQNELR------PCLVTKLAG--NRVTQVACGRQHTLAYVSDLG 213
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVK 117
+F++G+ E GQLG+G + P +K +E +K
Sbjct: 214 KVFSFGSGEEGQLGNGGTHNQLIPLPMKLPSNEELK 249
>gi|348683616|gb|EGZ23431.1| hypothetical protein PHYSODRAFT_258036 [Phytophthora sojae]
Length = 1271
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 126/307 (41%), Gaps = 48/307 (15%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
I+CG +H+ A+ G L+TWG+ E G+LG G R P KV L E V S SCG
Sbjct: 567 ISCGAQHSLAITDAGELYTWGSGEDGRLGHGDMRDRAVPRKVMSLLRESVASASCG---- 622
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
G N+ + P G F T I V CG AL G
Sbjct: 623 --------------------LGDNKWRDTPHQIVG-FPQGTRISNVVCGWNFTAALDRQG 661
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ WG GQ G G + PR ++ L E V+CG H+ ++ +
Sbjct: 662 NIFTWGKTGEGQCGLGYVDKDQVVPRCVEK----LREVAAGSAAVDVACGYTHTVVLTAS 717
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
GE+Y+WGLG GQL L S D P + + V CG HS A T K ++A
Sbjct: 718 GELYSWGLGEYGQLARVQLPS-DALCAPDQ--------LTRVYCGAFHSIATTEKRVMFA 768
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRI 366
WG + G GLG P D + + +VACGH +T+ D +
Sbjct: 769 WGLNSYGACGLGHTANKDK--PERIDCFSSQTEL--------VVACGHKYTIALEVDPAL 818
Query: 367 HGWGYNS 373
+G +S
Sbjct: 819 YGHSSSS 825
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 162/416 (38%), Gaps = 95/416 (22%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++VWG S + G R PKQ+ L G P + +ACG EH + S
Sbjct: 467 SHMWVWGRPPSLEGGTPLVLR----PKQVS-LLNGQPI------VQVACGGEHLLYLTST 515
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G ++++G NE A A A +ND T S
Sbjct: 516 GDVYSYGDNE---------------------------DKKAAAVTIATNANSADNDYTRS 548
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLG 200
S+ L T I +SCG+ H +A+++ G L WG E G+LG
Sbjct: 549 ISK-------------ELALEKALHRTTIAMISCGAQHSLAITDAGELYTWGSGEDGRLG 595
Query: 201 RGITCEGLQGPRVIK-------------GYAKFLDEA------PELEKITQVSCGEYHSA 241
G + +V+ G K+ D P+ +I+ V CG +A
Sbjct: 596 HGDMRDRAVPRKVMSLLRESVASASCGLGDNKWRDTPHQIVGFPQGTRISNVVCGWNFTA 655
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDK-ELLPRRVVALD----GIFIKDVACGGVHSC 296
A+ G ++TWG GQ C L DK +++PR V L G DVACG H+
Sbjct: 656 ALDRQGNIFTWGKTGEGQ---CGLGYVDKDQVVPRCVEKLREVAAGSAAVDVACGYTHTV 712
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
LT+ G LY+WG + GQL + +P+++ L P+ + V CG H
Sbjct: 713 VLTASGELYSWGLGEYGQL-------ARVQLPSDA---------LCAPDQLTRVYCGAFH 756
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
++ + WG NSYG + P +D C +L GH +A
Sbjct: 757 SIATTEKRVMFAWGLNSYGACGLGHTANKDKPERID-CFSSQTELVVACGHKYTIA 811
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 122/282 (43%), Gaps = 59/282 (20%)
Query: 141 TSRLWVWGQNQGSNFPRLFWG---AFTPNTI-------ICQVSCGSVHVVALSECGLLQA 190
+S +WVWG+ P L G P + I QV+CG H++ L+ G + +
Sbjct: 466 SSHMWVWGRP-----PSLEGGTPLVLRPKQVSLLNGQPIVQVACGGEHLLYLTSTGDVYS 520
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK------ITQVSCGEYHSAAVS 244
+G NE + +T Y + + + LEK I +SCG HS A++
Sbjct: 521 YGDNE-DKKAAAVTI-ATNANSADNDYTRSISKELALEKALHRTTIAMISCGAQHSLAIT 578
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL------------------------ 280
+ GE+YTWG G G+LGH ++ +PR+V++L
Sbjct: 579 DAGELYTWGSGEDGRLGHGDMRD---RAVPRKVMSLLRESVASASCGLGDNKWRDTPHQI 635
Query: 281 ----DGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFR 336
G I +V CG + AL +G ++ WG + GQ GLG + ++P
Sbjct: 636 VGFPQGTRISNVVCGWNFTAALDRQGNIFTWGKTGEGQCGLGYVDKD-QVVPR----CVE 690
Query: 337 NIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
+ + + VACG++HT+V G ++ WG YGQ A
Sbjct: 691 KLREVAAGSAAVDVACGYTHTVVLTASGELYSWGLGEYGQLA 732
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 120/315 (38%), Gaps = 96/315 (30%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQL-----------------------PPELFGCPAG 59
+Y WG G+ G G R +P+++ P ++ G P G
Sbjct: 583 LYTWGSGEDGRLGH-GDMRDRAVPRKVMSLLRESVASASCGLGDNKWRDTPHQIVGFPQG 641
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDG-TEEGRKHPEKVKQLQSEFVKS 118
+R ++ CG TAA+ G +FTWG GQ G G ++ + P V++L +
Sbjct: 642 --TRISNVVCGWNFTAALDRQGNIFTWGKTGEGQCGLGYVDKDQVVPRCVEKL-----RE 694
Query: 119 ISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVH 178
++ G +AA+ V+CG H
Sbjct: 695 VAAG---SAAV-----------------------------------------DVACGYTH 710
Query: 179 VVALSECGLLQAWGYNEYGQLGR-GITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
V L+ G L +WG EYGQL R + + L P +++T+V CG
Sbjct: 711 TVVLTASGELYSWGLGEYGQLARVQLPSDALCAP----------------DQLTRVYCGA 754
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
+HS A +E ++ WGL S G G + DK P R+ VACG ++ A
Sbjct: 755 FHSIATTEKRVMFAWGLNSYGACGLGHTANKDK---PERIDCFSSQTELVVACGHKYTIA 811
Query: 298 LTSKGALYAWGGSQA 312
L ALY S +
Sbjct: 812 LEVDPALYGHSSSSS 826
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 93/218 (42%), Gaps = 38/218 (17%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSL------------QSGDKELLPR 275
+ I QV+CG H ++ G+VY++G + ++ +S KEL
Sbjct: 497 QPIVQVACGGEHLLYLTSTGDVYSYGDNEDKKAAAVTIATNANSADNDYTRSISKELALE 556
Query: 276 RVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQT-----RSFSLIPNE 330
+ AL I ++CG HS A+T G LY WG + G+LG G R + E
Sbjct: 557 K--ALHRTTIAMISCGAQHSLAITDAGELYTWGSGEDGRLGHGDMRDRAVPRKVMSLLRE 614
Query: 331 S---------DTYFRNIPILVV--PNGVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQA 377
S D +R+ P +V P G ++ V CG + T R G I WG GQ
Sbjct: 615 SVASASCGLGDNKWRDTPHQIVGFPQGTRISNVVCGWNFTAALDRQGNIFTWGKTGEGQC 674
Query: 378 ANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADAC 415
Y V CV ++R++AAG SA + AC
Sbjct: 675 G---LGYVDKDQVVPRCVEKLREVAAG---SAAVDVAC 706
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 82/202 (40%), Gaps = 31/202 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
I+ WG GQ G ++ +P+ + +L AG+ + +D+ACG+ HT + + G
Sbjct: 663 IFTWGKTGEGQCGLGYVDKDQVVPRCVE-KLREVAAGSAA--VDVACGYTHTVVLTASGE 719
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L++WG E+GQL R + + + CGA + A E R
Sbjct: 720 LYSWGLGEYGQL------ARVQLPSDALCAPDQLTRVYCGAFHSIATTEKRV-------- 765
Query: 143 RLWVWGQNQ----------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALS-ECGLLQAW 191
++ WG N + P F+ T + V+CG + +AL + L
Sbjct: 766 -MFAWGLNSYGACGLGHTANKDKPERI-DCFSSQTELV-VACGHKYTIALEVDPALYGHS 822
Query: 192 GYNEYGQLGRGITCEGLQGPRV 213
+ + + G +GL PR
Sbjct: 823 SSSSHAMVRTGAAVDGLAIPRT 844
>gi|410957260|ref|XP_003985249.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
[Felis catus]
Length = 1143
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/309 (30%), Positives = 143/309 (46%), Gaps = 48/309 (15%)
Query: 90 EFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIA---EPRENDGTISTSRLWV 146
E QL G++ RK P+ +K + + S+ GA ++ +P E + +I +R
Sbjct: 193 EVHQLRAGSDGTRK-PKCIKLGKKAKIHSVDQGAEYMLILSSDGKPFEYNYSIEHARFQC 251
Query: 147 WGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCE 206
Q + I Q++CG H +ALS+ G L AWG N +GQLG G
Sbjct: 252 ILQEKX----------------IIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGSQFA 295
Query: 207 GLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQ 266
+ P++++ L P + Q+S G+ HS A+S +G +Y+WG GQLG L
Sbjct: 296 SIAIPQIVEN----LSGIP----LVQISAGKAHSMALSMSGNIYSWGRNDFGQLG---LG 344
Query: 267 SGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSL 326
D + P + ALD ++ +ACGG H+ LT G ++ +G + GQLG
Sbjct: 345 HTDGKDFPSLIEALDNQKVEFLACGGSHTALLTKDGLVFTFGAGKHGQLG---------- 394
Query: 327 IPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMRD-GRIHGWGYNSYGQAANEKS 382
N + R P LV N V +ACG HTL Y+ D G++ +G GQ N +
Sbjct: 395 -HNSTQNELR--PRLVTELAGNRVTQIACGRQHTLAYVSDLGKVFSFGSGKEGQLGNGGT 451
Query: 383 TYAWYPSPV 391
P P+
Sbjct: 452 HNQLIPLPM 460
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 99/200 (49%), Gaps = 21/200 (10%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+ I Q++CG+YHS A+S+ GE++ WG GQLG S + +P+ V L GI +
Sbjct: 256 KXIIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGSQFASIA--IPQIVENLSGIPLVQ 313
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP--- 344
++ G HS AL+ G +Y+WG + GQLGLG T ++ P L+
Sbjct: 314 ISAGKAHSMALSMSGNIYSWGRNDFGQLGLG-------------HTDGKDFPSLIEALDN 360
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAA 403
V+ +ACG SHT + +DG + +G +GQ + + P V G V ++A
Sbjct: 361 QKVEFLACGGSHTALLTKDGLVFTFGAGKHGQLGHNSTQNELRPRLVTELAGNRVTQIAC 420
Query: 404 GGGHSAVLADACSLKELCEF 423
G H+ LA L ++ F
Sbjct: 421 GRQHT--LAYVSDLGKVFSF 438
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 103/210 (49%), Gaps = 32/210 (15%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISCGA 123
+ I CG H+ A++ G LF WG N GQLG G++ P+ V+ L + IS G
Sbjct: 259 IQITCGDYHSLALSKGGELFAWGQNLHGQLGIGSQFASIAIPQIVENLSGIPLVQISAGK 318
Query: 124 HCTAAIAEPRENDGTISTSRLWVWGQN----------QGSNFPRLFWGAFTPNTIICQVS 173
+ A++ + ++ WG+N G +FP L N + ++
Sbjct: 319 AHSMALS---------MSGNIYSWGRNDFGQLGLGHTDGKDFPSLIEA--LDNQKVEFLA 367
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
CG H L++ GL+ +G ++GQLG T L+ PR++ A ++TQ+
Sbjct: 368 CGGSHTALLTKDGLVFTFGAGKHGQLGHNSTQNELR-PRLVTELAG--------NRVTQI 418
Query: 234 SCGEYHSAA-VSENGEVYTWGLGSVGQLGH 262
+CG H+ A VS+ G+V+++G G GQLG+
Sbjct: 419 ACGRQHTLAYVSDLGKVFSFGSGKEGQLGN 448
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 19/186 (10%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G + + IP Q+ L G P + I+ G H+ A++ G
Sbjct: 277 LFAWGQNLHGQLGIGSQFASIAIP-QIVENLSGIPL------VQISAGKAHSMALSMSGN 329
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+++WG N+FGQLG G +G+ P ++ L ++ V+ ++CG TA + + DG + T
Sbjct: 330 IYSWGRNDFGQLGLGHTDGKDFPSLIEALDNQKVEFLACGGSHTALLTK----DGLVFTF 385
Query: 143 RLWVWGQ-----NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYNEY 196
GQ Q PRL + Q++CG H +A +S+ G + ++G +
Sbjct: 386 GAGKHGQLGHNSTQNELRPRLV--TELAGNRVTQIACGRQHTLAYVSDLGKVFSFGSGKE 443
Query: 197 GQLGRG 202
GQLG G
Sbjct: 444 GQLGNG 449
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD-G 81
++ +G GQ G + +LR P L AG +R IACG +HT A SD G
Sbjct: 382 VFTFGAGKHGQLGHNSTQNELR------PRLVTELAG--NRVTQIACGRQHTLAYVSDLG 433
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVK 109
+F++G+ + GQLG+G + P +K
Sbjct: 434 KVFSFGSGKEGQLGNGGTHNQLIPLPMK 461
>gi|125550526|gb|EAY96235.1| hypothetical protein OsI_18130 [Oryza sativa Indica Group]
Length = 994
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 116/419 (27%), Positives = 173/419 (41%), Gaps = 51/419 (12%)
Query: 15 DNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL----DIACG 70
D+ + +YVWG + R G + +R ++ F P SR + + CG
Sbjct: 106 DDCDSLGDVYVWGEVFCENSVRVGSDTIIRSTEKTD---FLLPKPLESRLVLDVYHVDCG 162
Query: 71 HEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIA 130
H A V +G +FTWG + G+LG GT E HP V+ L + V ++CG T A+
Sbjct: 163 VRHAALVTRNGDVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVACGEFHTCAVT 222
Query: 131 EPRE----NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
E DGT + L G + G P+ GA + VSCG+ H ++ G
Sbjct: 223 TTGELYTWGDGTHNVG-LLGHGTDAGHWIPKRISGAL-DGLPVAYVSCGTWHTALITSMG 280
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE- 245
L +G +G LG G + P+ ++ + K V+CG +H+AA+ E
Sbjct: 281 QLFTFGDGSFGVLGHG-NLTSISCPKEVESLSGL--------KTIAVACGVWHTAAIVEV 331
Query: 246 ----------NGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGV 293
G+++TWG G +LGH GDKE L P V +L VACG
Sbjct: 332 IVTHSSSSVSAGKLFTWGDGDKHRLGH-----GDKESRLKPTCVASLIDYDFYRVACGHS 386
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG 353
+ LT+ G + + G S GQLG PN + + V VACG
Sbjct: 387 LTVCLTTSGKVLSMGNSVYGQLG----------NPNSDGRLPCLVEDRIAGEHVLQVACG 436
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 411
H V + WG + G+ + P+ V+ VR +A G +A +
Sbjct: 437 SYHVAVLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACGANFTAAI 495
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 131/313 (41%), Gaps = 69/313 (22%)
Query: 45 IPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKH 104
IPK++ L G P ++CG HTA + S G LFT+G FG LG G
Sbjct: 250 IPKRISGALDGLPVAY------VSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISC 303
Query: 105 PEKVKQLQSEFVKSISCGAHCTAAIAEP--RENDGTISTSRLWVWGQN------QGSNFP 156
P++V+ L +++CG TAAI E + ++S +L+ WG G
Sbjct: 304 PKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKES 363
Query: 157 RL--FWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVI 214
RL A + +V+CG V L+ G + + G + YGQLG P
Sbjct: 364 RLKPTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLG---------NPNSD 414
Query: 215 KGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLP 274
+++ E + QV+CG YH A ++ EV+TWG G+ G+LGH ++ D+++ P
Sbjct: 415 GRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEVFTWGKGANGRLGHGDIE--DRKV-P 471
Query: 275 RRVVALDGIFIKDVACGG-----------------------------------------V 293
+V AL ++ +ACG V
Sbjct: 472 TQVEALKDRAVRHIACGANFTAAICLHKWVSGADQSQCSSCQQPFGFTRKRHNCYNCGLV 531
Query: 294 HSCALTSKGALYA 306
H A TS+ AL A
Sbjct: 532 HCNACTSRKALRA 544
>gi|395746465|ref|XP_002825266.2| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Pongo abelii]
Length = 4581
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 133/288 (46%), Gaps = 31/288 (10%)
Query: 18 PAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAV 77
P ++ WG G+ G R +L A R DIACG H+AA+
Sbjct: 2816 PVDGKVFSWGEGDDGKLGHFSRMPRL------------IEALKTKRIRDIACGSSHSAAL 2863
Query: 78 ASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN-D 136
S G L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 2864 TSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLV 2923
Query: 137 GTISTSRLWVWG---QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++ LW G + +G N P+ +CQ+ CG+ +AL++ G++ WG
Sbjct: 2924 FSLGDGDLWKIGPGPEVKGCNIPQNI--ERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 2981
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC-GEYHSAAVSENGEVYTW 252
+Y +LG G ++ P+V++G +KI SC G H AV+++G+VY W
Sbjct: 2982 GDYFRLGHGSDVH-VRKPQVVEGLRG--------KKIVACSCSGALHCLAVTDSGQVYAW 3032
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
G GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3033 GDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3077
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 144/327 (44%), Gaps = 50/327 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +D+A G H+A V + G
Sbjct: 3807 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRGIEV--VDVAAGGAHSACVTAAGD 3858
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG E + P+ V+ LQ V I+CG+ + +D T+
Sbjct: 3859 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC--LTDDDTV--- 3913
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 3914 --WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 3971
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 3972 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4022
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G + VACG H+ AW S+
Sbjct: 4023 NDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAWSTSKPAS 4070
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPIL 341
G P + +P E + + + IPI+
Sbjct: 4071 AGKLP-----AQVPMEYN-HLQEIPII 4091
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 174/411 (42%), Gaps = 76/411 (18%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P C A A R + + G + AV +DG
Sbjct: 3701 IYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALATLRPVQLIGGEQTLFAVTADG 3751
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 3752 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE------- 3804
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG+ + PR+ + V+ G H ++ G L
Sbjct: 3805 ---GEVYSWGEAEDGKLGHGNRSPCDRPRVIES--LRGIEVVDVAAGGAHSACVTAAGDL 3859
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSEN 246
WG YG+LG + + L+ P+++ EA + ++ ++C G+ + ++++
Sbjct: 3860 YTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVVDIACGSGDAQTLCLTDD 3910
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 3911 DTVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 3967
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTL 358
WG +LG G SD + R P VQ +A G H +
Sbjct: 3968 WGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCV 4009
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
DG ++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4010 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4060
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 129/276 (46%), Gaps = 25/276 (9%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N + P+L G + N + H +AL+ G + +WG + G+LG G
Sbjct: 471 RVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG 530
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P+VI ++ + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 531 DTVP-LEEPKVISAFSG----KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 585
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + E +P V L G+ + DVACG + A+T G +++WG G+LG G
Sbjct: 586 ---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 642
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D V V CG ++ +DG+++ WG +
Sbjct: 643 DGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 690
Query: 379 NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ + YP ++ G +V +AAG H L +
Sbjct: 691 HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 134/310 (43%), Gaps = 53/310 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHC 125
+ G +H A++S+G +++WG E G+LG G P ++ L+ E V + GAH
Sbjct: 3791 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 3850
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCG 175
A L+ WG+ + P+L A + ++ ++CG
Sbjct: 3851 ACVTA----------AGDLYTWGKGRYGRLGHSDSEDQLKPKLV-EALQGHRVV-DIACG 3898
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + L++ + +WG +YG+LGRG +G + P I + +V
Sbjct: 3899 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVKV 3949
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G VYTWG G +LGH S D PR+V L G + +A G +
Sbjct: 3950 ECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSL 4006
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLV 350
H T G +Y WG + GQLG G T P LV V V
Sbjct: 4007 HCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRV 4053
Query: 351 ACGHSHTLVY 360
ACG +HTL +
Sbjct: 4054 ACGSAHTLAW 4063
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 168/396 (42%), Gaps = 73/396 (18%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+A G E A + + +F+WG N+ QLG + K P + L + V ++ G+
Sbjct: 2698 MAAGLESAATIRT--KVFSWGLNDKDQLGGLKNKKIKVPSFSETLSALNVVQVAGGSKSL 2755
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTP--NTIICQVSC--GSVHVVAL 182
A+ + ++ WG S + G T + ++ +V+ G+
Sbjct: 2756 FAVTVEGKVYACGEATKWPAWGLGISSGTVPIPHGXITALSSYVVKKVAVHSGTSQTGFX 2815
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
G + +WG + G+LG + PR+I EA + ++I ++CG HSAA
Sbjct: 2816 PVDGKVFSWGEGDDGKLGHFS-----RMPRLI--------EALKTKRIRDIACGSSHSAA 2862
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHSCAL 298
++ +GE+YTWGLG G+LGH GD +L P+ V L G + VACG + AL
Sbjct: 2863 LTSSGELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 2917
Query: 299 TSKGALYAWGGSQAGQLGLGPQTR-----------------------SFSLIPNES---- 331
T +G +++ G ++G GP+ + FSL +S
Sbjct: 2918 TDEGLVFSLGDGDLWKIGPGPEVKGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2977
Query: 332 --------------DTYFRNIPILVVPNGVQLVAC---GHSHTLVYMRDGRIHGWGYNSY 374
D + R ++ G ++VAC G H L G+++ WG N +
Sbjct: 2978 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVACSCSGALHCLAVTDSGQVYAWGDNDH 3037
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
GQ N +T P+ V G+ + ++A G HS
Sbjct: 3038 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3073
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 45/285 (15%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+L A N + H A+A+ G +++WG + G+LG G + P+ +
Sbjct: 482 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVI 541
Query: 109 KQLQ----SEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT 164
+ V I+CG+ +AAI E L+ WG+ N+ RL G+
Sbjct: 542 SAFSGKQAGKHVVHIACGSTYSAAITAEGE---------LYTWGRG---NYGRLGHGSSE 589
Query: 165 PNTI-----------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
I + V+CGS +A++E G + +WG +YG+LGRG +G + P
Sbjct: 590 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTP 648
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
++I+ + +V CG S A++++G+VY+WG G +LGH G +E
Sbjct: 649 KLIEKLQDL--------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH-----GTEE 695
Query: 272 LL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ P+ + L G + DVA G H ALT +++WG + Q
Sbjct: 696 HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 136/293 (46%), Gaps = 33/293 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG G+ G G L PK + G AG + + IACG ++AA
Sbjct: 510 LAATGEVYSWGCGDGGRLGH-GDTVPLEEPKVIS-AFSGKQAGKHV--VHIACGSTYSAA 565
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E P V L+ V ++CG+ +A
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA------ 619
Query: 137 GTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
++W WG R G TP I + +V CGS +AL++ G +
Sbjct: 620 -VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQV 678
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG + +LG G T E ++ P++++G + +K+ V+ G H A++E+ E
Sbjct: 679 YSWGKGDNQRLGHG-TEEHVRYPKLLEGL--------QGKKVIDVAAGSTHCLALTEDSE 729
Query: 249 VYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
V++W GS Q H +L+ E P + LD I +ACG S A +S
Sbjct: 730 VHSW--GSNDQCQHFDTLRVTKPE--PAALPGLDTKHIVGIACGPAQSFAWSS 778
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 139/340 (40%), Gaps = 63/340 (18%)
Query: 56 CPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
C AN IAC + ++ +G ++T N P+ V+ L S
Sbjct: 445 CEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRN 494
Query: 116 VKSISCGA--HCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAF 163
+ I+ + H A+A +T ++ WG G P++ AF
Sbjct: 495 IVKIAAHSDGHHYLALA---------ATGEVYSWGCGDGGRLGHGDTVPLEEPKVI-SAF 544
Query: 164 TPNTI---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF 220
+ + ++CGS + A++ G L WG YG+LG G + E P ++ G
Sbjct: 545 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-SSEDEAIPMLVAGLKGL 603
Query: 221 LDEAPELEKITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
K+ V+CG + + AV+ENG+V++WG G G+LG D P+ +
Sbjct: 604 --------KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR---GGSDGCKTPKLIE 652
Query: 279 ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
L + + V CG S ALT G +Y+WG +LG G ++ + R
Sbjct: 653 KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG------------TEEHVRYP 700
Query: 339 PILVVPNGVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+L G ++ VA G +H L D +H WG N Q
Sbjct: 701 KLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 110/281 (39%), Gaps = 69/281 (24%)
Query: 186 GLLQAWGYNEYGQLGRGI---------TCEGLQGPRVIK--------------------G 216
G + WG+N GQLG GI CE L R ++ G
Sbjct: 3699 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3757
Query: 217 Y----------AKFLDEAPELEKITQ-------VSCGEYHSAAVSENGEVYTWGLGSVGQ 259
Y + + LE I V+ G H A+S GEVY+WG G+
Sbjct: 3758 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3817
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LGH + D+ PR + +L GI + DVA GG HS +T+ G LY WG + G+LG
Sbjct: 3818 LGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG--- 3871
Query: 320 QTRSFSLIPNESDTYFRNIPILVVP---NGVQLVAC--GHSHTLVYMRDGRIHGWGYNSY 374
SD+ + P LV + V +AC G + TL D + WG Y
Sbjct: 3872 ----------HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDY 3921
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADA 414
G+ S P +D G V K+ G S L +
Sbjct: 3922 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 3962
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG + G G + +R P+Q+ + + IA G H DG
Sbjct: 3964 AVYTWGKGDYHRLGH-GSDDHVRRPRQVQ-------GLQGKKVIAIATGSLHCVCCTEDG 4015
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
++TWG N+ GQLGDGT + P V LQ + V ++CG+ T A
Sbjct: 4016 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4062
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 74/186 (39%), Gaps = 22/186 (11%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+TQ++C E +S NG VYT S L P+ V L I +A
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------------DTLAPQLVQGLASRNIVKIA 499
Query: 290 C--GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
G H AL + G +Y+WG G+LG G +P E V
Sbjct: 500 AHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPLEEPKVISAFSGKQAGKHV 553
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGG 406
+ACG +++ +G ++ WG +YG+ + S P V G +V +A G G
Sbjct: 554 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSG 613
Query: 407 HSAVLA 412
+ LA
Sbjct: 614 DAQTLA 619
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 82/218 (37%), Gaps = 62/218 (28%)
Query: 246 NGEVYTWGLGSVGQLG--------------------HCSLQSGDKELL------------ 273
+G +Y WG GQLG L G++ L
Sbjct: 3698 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3757
Query: 274 -----------------PRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWGGSQAGQ 314
P + ++ +FIK VA GG H AL+S+G +Y+WG ++ G+
Sbjct: 3758 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3817
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LG G RS P ++ R I ++ VA G +H+ G ++ WG Y
Sbjct: 3818 LGHG--NRSPCDRPRVIES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRY 3867
Query: 375 GQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
G+ + S P V+ G V +A G G + L
Sbjct: 3868 GRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTL 3905
>gi|410947356|ref|XP_003980415.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Felis catus]
Length = 531
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 141/304 (46%), Gaps = 39/304 (12%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V + +F +G N LG G + P+K++ L + +KS+S G+ ++ D
Sbjct: 37 VTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLST---ED 93
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQV---SCGSVHVVALSECGL 187
G + + WG N G+ + N +I QV +CGS H +AL+ G
Sbjct: 94 GVV-----YAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGE 148
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWGYN GQ+G G T PR + ++++ ++CG+ S AV +NG
Sbjct: 149 VFAWGYNNCGQVGSGSTTNQ-PTPRKVT-------NCLHIKRVVGIACGQTSSMAVLDNG 200
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
EVY WG GQLG L + +L P RV AL + + + CG H+ ALT +G LYAW
Sbjct: 201 EVYGWGYNGNGQLG---LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAW 257
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRI 366
G + GQLG G + S P + V++ AC +HT + G +
Sbjct: 258 GANTYGQLGTGNKNNLLS--PAHIMVEKERV--------VEIAACHSAHTSAAKTQGGHV 307
Query: 367 HGWG 370
+ WG
Sbjct: 308 YMWG 311
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 113/238 (47%), Gaps = 34/238 (14%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HV+ +E G++ AWG+N Y QLG G T +G+ +V ++++ +V+CG
Sbjct: 86 HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLL--------IKQVVEVACGS 137
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV---ACGGVH 294
+HS A++ +GEV+ WG + GQ+G S + PR+V + + IK V ACG
Sbjct: 138 HHSMALAADGEVFAWGYNNCGQVGS---GSTTNQPTPRKVT--NCLHIKRVVGIACGQTS 192
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG---VQLVA 351
S A+ G +Y WG + GQLGLG + P+ V V +
Sbjct: 193 SMAVLDNGEVYGWGYNGNGQLGLGNNGNQLT-------------PVRVAALHSVCVNQIV 239
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
CG++HTL +G ++ WG N+YGQ SP V + R + HSA
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLL--SPAHIMVEKERVVEIAACHSA 295
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 113/452 (25%), Positives = 177/452 (39%), Gaps = 69/452 (15%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG+N Q G G Q P Q+ C + +++ACG H+ A+A+DG
Sbjct: 95 VVYAWGHNGYSQLGN-GTTNQGIAPIQV------CTNLLIKQVVEVACGSHHSMALAADG 147
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+F WG N GQ+G G+ + P KV L + V I+CG + A+ + E G
Sbjct: 148 EVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYG--- 204
Query: 141 TSRLWVWGQN------QGSNFPRLFWGAFTPNTIIC--QVSCGSVHVVALSECGLLQAWG 192
WG N G+N +L +C Q+ CG H +AL++ GLL AWG
Sbjct: 205 ------WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G L ++ E E++ ++ +C H SAA ++ G VY
Sbjct: 259 ANTYGQLGTGNKNNLLSPAHIM----------VEKERVVEIAACHSAHTSAAKTQGGHVY 308
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC-GGVHSCALTSKGALYAWGG 309
W G C G +LP + +C V +C T +
Sbjct: 309 MW--------GQC---RGQSVILPH---------LTHFSCTDDVFACFATPAVSWRLLSV 348
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFR-NIPILVVPNGVQLVACGHSHTLVYMRDGRIHG 368
L + + P +D FR + + V V + C H ++
Sbjct: 349 EHEDFLTVAESLKKEFDSPETADLKFRIDGKYIHVHKAVLKIRCEHFRSMFQSY------ 402
Query: 369 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL----AAGGGHSAVLADACSLKELCEFR 424
W + ++ +Y Y + + + + L A G A LK+LC+
Sbjct: 403 WNEDMKEVIEIDQFSYPVYRAFLQYLYTDTVDLPPEDAIGLLDLATSYCENRLKKLCQHI 462
Query: 425 LAESVTLSNASEIEDVASRTGSEALARLCERL 456
+ +T+ NA + A R +E L C +
Sbjct: 463 IKRGITVENAFSLFSAAVRYDAEDLEEFCFKF 494
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 140/334 (41%), Gaps = 46/334 (13%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G +A + ++V+G N+S G G + +PK+L G + L
Sbjct: 26 VFGTSANEALYVTDNDEVFVFGLNYSNCLG-TGDNQSTLVPKKLEA-----LCGKKIKSL 79
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV-KQLQSEFVKSISCGAH 124
G H DG ++ WG N + QLG+GT P +V L + V ++CG+H
Sbjct: 80 SYGSG-PHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSH 138
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQ------GSN----FPRLFWGAFTPNTIICQVSC 174
+ A+A E ++ WG N GS PR ++ ++C
Sbjct: 139 HSMALAADGE---------VFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVV-GIAC 188
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G +A+ + G + WGYN GQLG G L RV A + Q+
Sbjct: 189 GQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRV---------AALHSVCVNQIV 239
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGG 292
CG H+ A+++ G +Y WG + GQLG +G+K L P ++ ++ AC
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLG-----TGNKNNLLSPAHIMVEKERVVEIAACHS 294
Query: 293 VH-SCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
H S A T G +Y WG + GQ + P FS
Sbjct: 295 AHTSAAKTQGGHVYMWGQCR-GQSVILPHLTHFS 327
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 17/173 (9%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHSCALT 299
V++N EV+ +GL LG +GD + L+P+++ AL G IK ++ G G H T
Sbjct: 37 VTDNDEVFVFGLNYSNCLG-----TGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLST 91
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
G +YAWG + QLG G + + I ++ L++ V+ VACG H++
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTN--------LLIKQVVE-VACGSHHSMA 142
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
DG + WGYN+ GQ + +T P V C+ R + G ++ +A
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMA 195
>gi|334346980|ref|XP_001366466.2| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Monodelphis domestica]
Length = 4706
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 134/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3069 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAAITSSGE 3120
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 3121 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 3173
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 3174 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3230
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV++ G+VY
Sbjct: 3231 GKGDYFRLGHGTDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDTGQVYA 3281
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3282 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3327
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 3008 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQI-----TALSNYVVKKVAVHSGGRHAMA 3062
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AAI
Sbjct: 3063 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT------ 3116
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 3117 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3170
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 3171 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 3221
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH + K P+ V L G I VA G +H A+T G
Sbjct: 3222 TKSGVVWTWGKGDYFRLGHGTDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDTGQ 3278
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 3279 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3325
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 166/393 (42%), Gaps = 69/393 (17%)
Query: 68 ACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTA 127
+ G E A + + +F WG N+ QLG K P + L + V ++ G+
Sbjct: 2949 SSGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLF 3006
Query: 128 AIAEPREND--GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
A+ + G + RL + + PR V G H +AL+
Sbjct: 3007 AVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVD 3066
Query: 186 GLLQAWGYNEYGQLGR--GITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
G + +WG + G+LG + C+ PR+I EA + ++I ++CG HSAA+
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDK---PRLI--------EALKTKRIRDIACGSSHSAAI 3115
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHSCALT 299
+ +GE+YTWGLG G+LGH GD +L P+ V L G + VACG + ALT
Sbjct: 3116 TSSGELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3170
Query: 300 SKGALYAWGGSQAGQLGLG-------PQT---------------RSFSLIPNES------ 331
+G +++WG G+LG G PQ FSL +S
Sbjct: 3171 DEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3230
Query: 332 ------------DTYFRNIPILVVPNGVQLV--ACGHSHTLVYMRDGRIHGWGYNSYGQA 377
D + R ++ G ++V A G H L G+++ WG N +GQ
Sbjct: 3231 GKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQ 3290
Query: 378 ANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
N +T P+ V G+ + ++A G HS
Sbjct: 3291 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3323
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 129/276 (46%), Gaps = 25/276 (9%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R+++ N + P+L G + N + H +AL+ G + +WG + G+LG G
Sbjct: 472 RVYMQAYNSDTLGPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHG 531
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P++I L + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 532 DTVP-LEEPKMISA----LSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 586
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + + +P V L G+ + DV+CG + A+T G +++WG G+LG G
Sbjct: 587 ---GSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 643
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D V V CG ++ +DG+++ WG +
Sbjct: 644 DGCKTPKLIEKLQDL------------DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLG 691
Query: 379 NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ + YP ++ G +V +AAG H L +
Sbjct: 692 HGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTE 727
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 138/293 (47%), Gaps = 33/293 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++ WG G+ G G L PK + L G AG + + IACG ++AA
Sbjct: 511 LAATGEVFSWGCGDGGRLGH-GDTVPLEEPKMIS-ALSGKQAGKHV--VHIACGSTYSAA 566
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E + P V L+ V +SCG+ +A
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLA------ 620
Query: 137 GTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
++W WG R G TP I + +V CGS VAL++ G +
Sbjct: 621 -VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQV 679
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG + +LG G T E ++ P++++G + +K+ V+ G H A++E+ E
Sbjct: 680 YSWGKGDNQRLGHG-TEEHVRYPKLLEGL--------QGKKVVDVAAGSTHCLALTEDSE 730
Query: 249 VYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
V++W GS Q H +L+ E P + LD I +ACG S A +S
Sbjct: 731 VHSW--GSNDQCQHFDTLRITKPE--PTALPGLDTKHIVGIACGPAQSFAWSS 779
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 124/311 (39%), Gaps = 78/311 (25%)
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAI 129
GH H A+A+ G +F+WG + G+LG G + P+ + L + G H
Sbjct: 505 GH-HYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGK-----QAGKH----- 553
Query: 130 AEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQ 189
+ ++CGS + A++ G L
Sbjct: 554 ---------------------------------------VVHIACGSTYSAAITAEGELY 574
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAVSENG 247
WG YG+LG G + E P ++ G K+ VSCG + + AV+ENG
Sbjct: 575 TWGRGNYGRLGHG-SSEDQTIPMLVTGLKGL--------KVIDVSCGSGDAQTLAVTENG 625
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
+V++WG G G+LG D P+ + L + + V CG S ALT G +Y+W
Sbjct: 626 QVWSWGDGDYGKLGR---GGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSW 682
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGR 365
G +LG G ++ + R +L G ++ VA G +H L D
Sbjct: 683 GKGDNQRLGHG------------TEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSE 730
Query: 366 IHGWGYNSYGQ 376
+H WG N Q
Sbjct: 731 VHSWGSNDQCQ 741
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 114/252 (45%), Gaps = 51/252 (20%)
Query: 22 AIYVWGYNHSGQTG-RKGRERQLRIPKQL-----PPELFG-------------CPAGANS 62
IY WG+NH GQ G +G + ++ P + P +L G A
Sbjct: 3956 TIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVTADGKVEALQGY 4015
Query: 63 RWLDIACG--HEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
R +DIACG T + D T+++WG ++G+LG G +G K P K+ L V +
Sbjct: 4016 RVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVE 4075
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQ------NQGSN----FPRLFWGAFTPNTIIC 170
CG+ + A+ + + ++ WG+ GS+ PR G I
Sbjct: 4076 CGSQFSVALTK---------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI-- 4124
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
++ GS+H V +E G + WG N+ GQLG G T +Q PR++ A + +KI
Sbjct: 4125 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG-TTNAIQRPRLVA--------ALQGKKI 4175
Query: 231 TQVSCGEYHSAA 242
+V+CG H+ A
Sbjct: 4176 NRVACGSAHTLA 4187
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 116/292 (39%), Gaps = 56/292 (19%)
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
T + GT++ WG N GQLG K P + L + + G A+
Sbjct: 3948 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVTA-- 4005
Query: 134 ENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGS--VHVVALSECGLLQAW 191
DG + QG + ++CGS + L++ + +W
Sbjct: 4006 --DGKVEAL--------QGYR--------------VIDIACGSGDAQTLCLTDDDTVWSW 4041
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +YG+LGRG +G + P I + +V CG S A++++G VYT
Sbjct: 4042 GDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVKVECGSQFSVALTKSGAVYT 4092
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG G +LGH S D PR+V L G + +A G +H T G +Y WG +
Sbjct: 4093 WGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4149
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 360
GQLG G T P LV + VACG +HTL +
Sbjct: 4150 EGQLGDG-------------TTNAIQRPRLVAALQGKKINRVACGSAHTLAW 4188
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 103/222 (46%), Gaps = 46/222 (20%)
Query: 166 NTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAP 225
N I Q++C + LS G + YN GP++++G A +
Sbjct: 451 NLGITQIACAEKRFLILSRNGRVYMQAYNS-----------DTLGPQLVQGLA-----SR 494
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI 283
+ KI S G +H A++ GEV++WG G G+LGH GD L P+ + AL G
Sbjct: 495 NIVKIAAHSDG-HHYLALAATGEVFSWGCGDGGRLGH-----GDTVPLEEPKMISALSGK 548
Query: 284 ----FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIP 339
+ +ACG +S A+T++G LY WG G+LG G + + IP
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-------------SSEDQTIP 595
Query: 340 ILVV-PNGVQL--VAC--GHSHTLVYMRDGRIHGWGYNSYGQ 376
+LV G+++ V+C G + TL +G++ WG YG+
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 637
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 107/253 (42%), Gaps = 52/253 (20%)
Query: 186 GLLQAWGYNEYGQLGRGI---------TCEGLQGPRVIKG-------YAKFLD---EAPE 226
G + WG+N GQLG GI CE L R I+ +A D EA +
Sbjct: 3955 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVTADGKVEALQ 4013
Query: 227 LEKITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF 284
++ ++CG + + ++++ V++WG G G+LG D +P ++ +L G+
Sbjct: 4014 GYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLG 4070
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP 344
+ V CG S ALT GA+Y WG +LG G SD + R P
Sbjct: 4071 VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG------------SDDHVRR------P 4112
Query: 345 NGVQ--------LVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG 396
VQ +A G H + DG ++ WG N GQ + + P V G
Sbjct: 4113 RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4172
Query: 397 -EVRKLAAGGGHS 408
++ ++A G H+
Sbjct: 4173 KKINRVACGSAHT 4185
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 55/121 (45%), Gaps = 9/121 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG + G G + +R P+Q+ + + IA G H DG
Sbjct: 4089 AVYTWGKGDYHRLGH-GSDDHVRRPRQVQ-------GLQGKKVIAIATGSLHCVCCTEDG 4140
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGTIS 140
++TWG N+ GQLGDGT + P V LQ + + ++CG AH A N G +
Sbjct: 4141 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPANAGKLP 4200
Query: 141 T 141
T
Sbjct: 4201 T 4201
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 31/173 (17%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++ WG G+ GR G + ++P ++ L G + + CG + + A+ G
Sbjct: 4037 TVWSWGDGDYGKLGRGGSD-GCKVPMKID-SLTGLGV------VKVECGSQFSVALTKSG 4088
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
++TWG ++ +LG G+++ + P +V+ LQ + V +I+ G+ HC DG +
Sbjct: 4089 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT-----EDGEVY 4143
Query: 141 TSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALS 183
T WG N PRL A I +V+CGS H +A S
Sbjct: 4144 T-----WGDNDEGQLGDGTTNAIQRPRLV--AALQGKKINRVACGSAHTLAWS 4189
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 74/186 (39%), Gaps = 22/186 (11%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
ITQ++C E +S NG VY S L P+ V L I +A
Sbjct: 454 ITQIACAEKRFLILSRNGRVYMQAYNS-------------DTLGPQLVQGLASRNIVKIA 500
Query: 290 C--GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
G H AL + G +++WG G+LG G +P E + V
Sbjct: 501 AHSDGHHYLALAATGEVFSWGCGDGGRLGHG------DTVPLEEPKMISALSGKQAGKHV 554
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGG 406
+ACG +++ +G ++ WG +YG+ + S P V G +V ++ G G
Sbjct: 555 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSG 614
Query: 407 HSAVLA 412
+ LA
Sbjct: 615 DAQTLA 620
>gi|297797029|ref|XP_002866399.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297312234|gb|EFH42658.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 445
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 157/372 (42%), Gaps = 71/372 (19%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQL--------------------QSEFVKSISCG 122
LF+WG GQLG G EE R +P V L S F ISCG
Sbjct: 50 LFSWGRGASGQLGGGIEEIRMYPSPVANLLLRSDQSFSLAQTPGRIDAESSSFPIGISCG 109
Query: 123 AHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPN--------TIIC 170
+ G LW+WG+ G RL +G F PN +I C
Sbjct: 110 LF----------HSGLTIDGDLWIWGKGDGG---RLGFGQENSVFVPNLNPLFEEHSIRC 156
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
++ G +H VAL+ G + WGY +G LG + L PR + G KI
Sbjct: 157 -IALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELV-PRCVDGSWDC--------KI 206
Query: 231 TQVSCGEYHSAAVSENGEVYTWGL----GSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
+ ++ H+AA++E+GE+Y WG G +G G +P +V AL + +
Sbjct: 207 SAIATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALT-VPVA 265
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
V+CGG + ALT +G L+ WG + +LG G + +P S R
Sbjct: 266 SVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPLPVPSLDSVR---------- 315
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGG 405
+ +ACG H+L ++G++ WG+ +GQ N P+ ++ ++ +A GG
Sbjct: 316 ITQIACGGYHSLALTKEGKVLSWGHGGHGQLGNSSLRNQKIPTEIEALADKKIVFIACGG 375
Query: 406 GHSAVLADACSL 417
SA + D L
Sbjct: 376 SSSAAITDGGEL 387
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 157/352 (44%), Gaps = 50/352 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+++WG G+ G G+E + +P P LF IA G H+ A+ G
Sbjct: 121 LWIWGKGDGGRLGF-GQENSVFVPNLNP--LF-----EEHSIRCIALGGLHSVALTHQGD 172
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+FTWG FG LG P V + +I+ TAAI E E
Sbjct: 173 VFTWGYGGFGALGHKVYTRELVPRCVDGSWDCKISAIATSGTHTAAITESGE-------- 224
Query: 143 RLWVWGQNQGSNFPRLFW--------GAFTPNTI------ICQVSCGSVHVVALSECGLL 188
L++WG+ +G L G P+ + + VSCG +AL++ G L
Sbjct: 225 -LYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASVSCGGFFTMALTKEGQL 283
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE--KITQVSCGEYHSAAVSEN 246
WG N +LGRG G + V P L+ +ITQ++CG YHS A+++
Sbjct: 284 WNWGANSNYELGRGDNLGGWEPLPV-----------PSLDSVRITQIACGGYHSLALTKE 332
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
G+V +WG G GQLG+ SL++ + +P + AL I +ACGG S A+T G L+
Sbjct: 333 GKVLSWGHGGHGQLGNSSLRN---QKIPTEIEALADKKIVFIACGGSSSAAITDGGELWM 389
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 358
WG ++ QLG+ P P E + F P+ V V+ G SH L
Sbjct: 390 WGNAKDFQLGV-PGLPEIQTTPVEVN--FLTEEDERQPHKVISVSIGASHAL 438
>gi|444731984|gb|ELW72311.1| RCC1 and BTB domain-containing protein 1 [Tupaia chinensis]
Length = 531
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 149/366 (40%), Gaps = 81/366 (22%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G +A + ++V+G N+S G G + +PK+L G + L
Sbjct: 26 VFGTSANEALYVTDSDEVFVFGLNYSNCLG-TGDNQSTLVPKKLEA-----LCGKKIKSL 79
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
G H DG ++ WG N + QLG+GT P +V C
Sbjct: 80 SYGSG-PHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQV----------------C 122
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
T + + + +V+CGS H +AL+
Sbjct: 123 TNLLIKQ------------------------------------VVEVACGSHHSMALAAD 146
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + AWGYN GQ+G G T PR + ++++ ++CG+ S AV +
Sbjct: 147 GEVFAWGYNNCGQVGSGSTANQ-PTPRKVT-------NCLHIKRVVGIACGQTSSMAVLD 198
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
NGEVY WG GQLG L + +L P RV AL + + + CG H+ ALT +G LY
Sbjct: 199 NGEVYGWGYNGNGQLG---LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLY 255
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDG 364
AWG + GQLG G + S P + V++ AC +HT + G
Sbjct: 256 AWGANTYGQLGTGNKNNLLS--PAHIMVEKERV--------VEIAACHSAHTSAAKTQGG 305
Query: 365 RIHGWG 370
++ WG
Sbjct: 306 HVYMWG 311
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 114/238 (47%), Gaps = 34/238 (14%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HV+ +E G++ AWG+N Y QLG G T +G+ +V ++++ +V+CG
Sbjct: 86 HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLL--------IKQVVEVACGS 137
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV---ACGGVH 294
+HS A++ +GEV+ WG + GQ+G S + + PR+V + + IK V ACG
Sbjct: 138 HHSMALAADGEVFAWGYNNCGQVGSGSTAN---QPTPRKVT--NCLHIKRVVGIACGQTS 192
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG---VQLVA 351
S A+ G +Y WG + GQLGLG + P+ V V +
Sbjct: 193 SMAVLDNGEVYGWGYNGNGQLGLGNNGNQLT-------------PVRVAALHSVCVNQIV 239
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
CG++HTL +G ++ WG N+YGQ SP V + R + HSA
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLL--SPAHIMVEKERVVEIAACHSA 295
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 17/173 (9%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHSCALT 299
V+++ EV+ +GL LG +GD + L+P+++ AL G IK ++ G G H T
Sbjct: 37 VTDSDEVFVFGLNYSNCLG-----TGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLST 91
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
G +YAWG + QLG G + + I ++ L++ V+ VACG H++
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTN--------LLIKQVVE-VACGSHHSMA 142
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
DG + WGYN+ GQ + + P V C+ R + G ++ +A
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMA 195
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 20/151 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WGYN +GQ G QL P ++ C I CG+ HT A+ +G
Sbjct: 202 VYGWGYNGNGQLGLGNNGNQLT-PVRVAALHSVCVN-------QIVCGYAHTLALTDEGL 253
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
L+ WGAN +GQLG G + P + + V+ +C AH +AA +
Sbjct: 254 LYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQG--------- 304
Query: 142 SRLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 305 GHVYMWGQCRGQSVILPHLTHFSCTDDVFAC 335
>gi|197121464|ref|YP_002133415.1| chromosome condensation regulator RCC1 [Anaeromyxobacter sp. K]
gi|196171313|gb|ACG72286.1| regulator of chromosome condensation RCC1 [Anaeromyxobacter sp. K]
Length = 714
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 164/392 (41%), Gaps = 84/392 (21%)
Query: 64 WLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA 123
W ++ HT A+A DGTL+ WG N+ GQ+GDGT R P +V +
Sbjct: 44 WARVSTRGSHTVAIAKDGTLWAWGINDAGQIGDGTRVDRATPVRVGAGFARAAAGTG--- 100
Query: 124 HCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHV---- 179
T A+ + DGT LW WG N G TP Q+ G V
Sbjct: 101 -YTLAV----KADGT-----LWAWGDNASGQLGD---GTTTPRAAPVQIGAGFAEVAASR 147
Query: 180 -------VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
+A+ G L AWG N G +G G + ++ G+ T+
Sbjct: 148 NWLEPVSLAVKTDGTLWAWGSNRQGLVGDGSGLDQHAPVQIGTGF-------------TR 194
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
V+ G++H+AAV +G +TWG + GQLG ++ S + P +V+ + + ++A GG
Sbjct: 195 VAVGDWHAAAVKADGSAWTWGSNASGQLGDGTIASTPRP-TPAQVLPAE---VMEIAAGG 250
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQT--RSFSLI----------------------- 327
H+ AL S G++ WG ++ GQLG G T RS L+
Sbjct: 251 AHTVALRSDGSIMVWGTNRDGQLGDGTTTGRRSPVLLGGGGFVQIAAAANHTAALKADGT 310
Query: 328 -----PNES----DTYFRNIPILV-VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
NES D F + L V +G VA G H DG WG + +GQA
Sbjct: 311 LWTCGANESGQLGDGTFASRSWLTRVGSGFAQVAVGSRHMAAIAADGSRWAWGNDDFGQA 370
Query: 378 ANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHS 408
+ +W S V VG ++AAG GHS
Sbjct: 371 GDG----SWSRSAVPAQVGSGFARVAAGLGHS 398
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 134/469 (28%), Positives = 188/469 (40%), Gaps = 110/469 (23%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLR-IPKQ-LPPELFGCPAGANSRWLDIACGHEHT 74
+ A + + WG N SGQ G R P Q LP E+ ++IA G HT
Sbjct: 205 VKADGSAWTWGSNASGQLGDGTIASTPRPTPAQVLPAEV-----------MEIAAGGAHT 253
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK-----QLQSEFVKSISCGAHCTAAI 129
A+ SDG++ WG N GQLGDGT GR+ P + Q+ + + + A T
Sbjct: 254 VALRSDGSIMVWGTNRDGQLGDGTTTGRRSPVLLGGGGFVQIAAAANHTAALKADGTLWT 313
Query: 130 AEPREN----DGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
E+ DGT + SR W+ GS F QV+ GS H+ A++
Sbjct: 314 CGANESGQLGDGTFA-SRSWL--TRVGSGF--------------AQVAVGSRHMAAIAAD 356
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFL------------------------ 221
G AWG +++GQ G G +V G+A+
Sbjct: 357 GSRWAWGNDDFGQAGDGSWSRSAVPAQVGSGFARVAAGLGHSLGVKADGTLWAWGLNDMG 416
Query: 222 -----DEAPEL-------EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGD 269
+AP+ E QV+ G HS AV+ +G +++WG S GQLG S+ S
Sbjct: 417 QVGDGTDAPQRGAPVRIGEAFAQVAAGYQHSLAVAADGTLWSWGSNSSGQLGDPSVAS-- 474
Query: 270 KELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPN 329
R A G VA G HS + + G L+ WGG G
Sbjct: 475 -----RHTPAQIGSGFVRVAAGRWHSAGVKADGTLWIWGGDVGG---------------- 513
Query: 330 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPS 389
TY + P V +G VA GH HT+ DG + WG N GQ + T+ +
Sbjct: 514 ---TY--DTPTQV-GSGFLEVAAGHEHTVALAEDGTLWTWGNNGLGQLCD--GTFDQRIA 565
Query: 390 PVDWCVGEVRKLAAGGGHSAVLADACSL---KELCEFRLAESVTLSNAS 435
PV G V +AAG H+ L +L E +L + T S+A+
Sbjct: 566 PVQVGTGFVH-VAAGAYHTVALEADGTLWACGENGAGQLGDGTTTSSAA 613
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 123/410 (30%), Positives = 169/410 (41%), Gaps = 74/410 (18%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ ++ WG N G G G P Q+ + + +A G H AA
Sbjct: 157 VKTDGTLWAWGSNRQGLVG-DGSGLDQHAPVQI-----------GTGFTRVAVGDWHAAA 204
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V +DG+ +TWG+N GQLGDGT P + L +E ++ + GAH A +D
Sbjct: 205 VKADGSAWTWGSNASGQLGDGTIASTPRPTPAQVLPAEVMEIAAGGAHTVA-----LRSD 259
Query: 137 GTISTSRLWVWGQNQ----------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
G+I VWG N+ G P L G Q++ + H AL G
Sbjct: 260 GSIM-----VWGTNRDGQLGDGTTTGRRSPVLLGGGG-----FVQIAAAANHTAALKADG 309
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
L G NE GQLG G RV G+A QV+ G H AA++ +
Sbjct: 310 TLWTCGANESGQLGDGTFASRSWLTRVGSGFA-------------QVAVGSRHMAAIAAD 356
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
G + WG GQ G S + +P +V G VA G HS + + G L+A
Sbjct: 357 GSRWAWGNDDFGQAGDGSWS---RSAVPAQV----GSGFARVAAGLGHSLGVKADGTLWA 409
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRI 366
WG + GQ+G G +D R P+ + Q VA G+ H+L DG +
Sbjct: 410 WGLNDMGQVGDG------------TDAPQRGAPVRIGEAFAQ-VAAGYQHSLAVAADGTL 456
Query: 367 HGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA-VLADAC 415
WG NS GQ + P+ + G VR +AAG HSA V AD
Sbjct: 457 WSWGSNSSGQLGDPSVASRHTPAQI--GSGFVR-VAAGRWHSAGVKADGT 503
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 107/365 (29%), Positives = 161/365 (44%), Gaps = 72/365 (19%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++ WG N GQ G Q P ++ E F +A G++H+ A
Sbjct: 401 VKADGTLWAWGLNDMGQVGDGTDAPQRGAPVRIG-EAF----------AQVAAGYQHSLA 449
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
VA+DGTL++WG+N GQLGD + R P Q+ S FV+ ++ G +A + + D
Sbjct: 450 VAADGTLWSWGSNSSGQLGDPSVASRHTP---AQIGSGFVR-VAAGRWHSAGV----KAD 501
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI---ICQVSCGSVHVVALSECGLLQAWGY 193
GT LW+WG + G + TP + +V+ G H VAL+E G L WG
Sbjct: 502 GT-----LWIWGGDVGGTYD-------TPTQVGSGFLEVAAGHEHTVALAEDGTLWTWGN 549
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL--EKITQVSCGEYHSAAVSENGEVYT 251
N GQL C+G R+ AP V+ G YH+ A+ +G ++
Sbjct: 550 NGLGQL-----CDGTFDQRI----------APVQVGTGFVHVAAGAYHTVALEADGTLWA 594
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
G GQLG + S LL G V+ G +H+ A+ + G L++WG
Sbjct: 595 CGENGAGQLGDGTTTS-SAALLGV------GTGFAAVSAGELHTVAVKADGTLWSWGSGS 647
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGY 371
G+L +F P + + +G VA G +HTLV DG + G
Sbjct: 648 LGEL----GGGAFDWRPEPTQ----------IGSGAAQVAAGGAHTLVVKADGTLWAVGQ 693
Query: 372 NSYGQ 376
+++GQ
Sbjct: 694 SAFGQ 698
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 156/393 (39%), Gaps = 88/393 (22%)
Query: 11 ARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACG 70
+R + I A + + WG + GQ G R PA S + +A G
Sbjct: 347 SRHMAAIAADGSRWAWGNDDFGQAGDGSWSRSA------------VPAQVGSGFARVAAG 394
Query: 71 HEHTAAVASDGTLFTWGANEFGQLGDGTEE-GRKHPEKVKQLQSEFVKSISCGAHCTAAI 129
H+ V +DGTL+ WG N+ GQ+GDGT+ R P ++ E ++ G + A+
Sbjct: 395 LGHSLGVKADGTLWAWGLNDMGQVGDGTDAPQRGAPVRI----GEAFAQVAAGYQHSLAV 450
Query: 130 AEPRENDGTISTSRLWVWGQNQGSNF--PRLFWGAFTPNTI---ICQVSCGSVHVVALSE 184
A DGT LW WG N P + TP I +V+ G H +
Sbjct: 451 AA----DGT-----LWSWGSNSSGQLGDPSVA-SRHTPAQIGSGFVRVAAGRWHSAGVKA 500
Query: 185 CGLLQAWG------YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY 238
G L WG Y+ Q+G G FL +V+ G
Sbjct: 501 DGTLWIWGGDVGGTYDTPTQVGSG-----------------FL----------EVAAGHE 533
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
H+ A++E+G ++TWG +GQL + D+ + P +V G VA G H+ AL
Sbjct: 534 HTVALAEDGTLWTWGNNGLGQLCDGTF---DQRIAPVQV----GTGFVHVAAGAYHTVAL 586
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 358
+ G L+A G + AGQLG G T S +L L V G V+ G HT+
Sbjct: 587 EADGTLWACGENGAGQLGDGTTTSSAAL--------------LGVGTGFAAVSAGELHTV 632
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
DG + W S + W P P
Sbjct: 633 AVKADGTLWSW--GSGSLGELGGGAFDWRPEPT 663
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 104/235 (44%), Gaps = 48/235 (20%)
Query: 54 FGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS 113
+ P S +L++A GHEHT A+A DGTL+TWG N GQL DGT + R P Q+ +
Sbjct: 515 YDTPTQVGSGFLEVAAGHEHTVALAEDGTLWTWGNNGLGQLCDGTFDQRIAP---VQVGT 571
Query: 114 EFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPN------- 166
FV ++ GA+ T A+ E DGT LW G+N G T +
Sbjct: 572 GFVH-VAAGAYHTVAL----EADGT-----LWACGENGAGQLGD---GTTTSSAALLGVG 618
Query: 167 TIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPE 226
T VS G +H VA+ G L +WG + D PE
Sbjct: 619 TGFAAVSAGELHTVAVKADGTLWSWGSGSL-----------------GELGGGAFDWRPE 661
Query: 227 LEKI----TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV 277
+I QV+ G H+ V +G ++ G + GQLG ++ + L+P RV
Sbjct: 662 PTQIGSGAAQVAAGGAHTLVVKADGTLWAVGQSAFGQLGDGTVST----LVPVRV 712
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 100/252 (39%), Gaps = 38/252 (15%)
Query: 164 TPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDE 223
TP +VS H VA+++ G L AWG N+ GQ+G G + RV
Sbjct: 39 TPTIEWARVSTRGSHTVAIAKDGTLWAWGINDAGQIGDGTRVDRATPVRVGA-------- 90
Query: 224 APELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
+ + G ++ AV +G ++ WG + GQL GD PR G
Sbjct: 91 -----GFARAAAGTGYTLAVKADGTLWAWGDNASGQL-------GDGTTTPRAAPVQIGA 138
Query: 284 FIKDVACGGVH----SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIP 339
+VA S A+ + G L+AWG ++ G +G + ++ P
Sbjct: 139 GFAEVAASRNWLEPVSLAVKTDGTLWAWGSNRQGLVG-------------DGSGLDQHAP 185
Query: 340 ILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVR 399
+ + G VA G H DG WG N+ GQ + P+P EV
Sbjct: 186 VQ-IGTGFTRVAVGDWHAAAVKADGSAWTWGSNASGQLGDGTIASTPRPTPAQVLPAEVM 244
Query: 400 KLAAGGGHSAVL 411
++AAGG H+ L
Sbjct: 245 EIAAGGAHTVAL 256
>gi|449275747|gb|EMC84515.1| putative E3 ubiquitin-protein ligase HERC2 [Columba livia]
Length = 4840
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 134/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3072 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAAITSSGE 3123
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 3124 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 3176
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 3177 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3233
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV++ G+VY
Sbjct: 3234 GKGDYFRLGHGTDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDTGQVYA 3284
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3285 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3330
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 3011 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQI-----TALSNYVVKKVAVHSGGRHAMA 3065
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AAI
Sbjct: 3066 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT------ 3119
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 3120 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3173
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 3174 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 3224
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH + K P+ V L G I VA G +H A+T G
Sbjct: 3225 TKSGVVWTWGKGDYFRLGHGTDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDTGQ 3281
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 3282 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3328
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 145/328 (44%), Gaps = 51/328 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +D+A G H+A + + G
Sbjct: 4065 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRGIEV--VDVAAGGAHSACITAAGD 4116
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFTWG +G+LG G E + P+ V+ LQ V I+CG+ + +D T+
Sbjct: 4117 LFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLC--LTDDDTV--- 4171
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWG-Y 193
W WG R G P I + +V CGS VAL++ G + W +
Sbjct: 4172 --WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWQVF 4229
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 4230 RDYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWG 4280
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
GQLG + + + PR V AL G I VACG H+ AW S+
Sbjct: 4281 DNDEGQLGDGTTNAIQR---PRLVAALQGKKINRVACGSAHT---------LAWSTSKPA 4328
Query: 314 QLGLGPQTRSFSLIPNESDTYFRNIPIL 341
G P + +P E + + + IPI+
Sbjct: 4329 NAGKLP-----TQVPMEYN-HLQEIPII 4350
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 166/393 (42%), Gaps = 69/393 (17%)
Query: 68 ACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTA 127
A G E A + + +F WG N+ QLG K P + L + V ++ G+
Sbjct: 2952 AAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLF 3009
Query: 128 AIAEPREND--GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
A+ + G + RL + + PR V G H +AL+
Sbjct: 3010 AVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVD 3069
Query: 186 GLLQAWGYNEYGQLGR--GITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
G + +WG + G+LG + C+ PR+I EA + ++I ++CG HSAA+
Sbjct: 3070 GKVFSWGEGDDGKLGHFSRMNCDK---PRLI--------EALKTKRIRDIACGSSHSAAI 3118
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHSCALT 299
+ +GE+YTWGLG G+LGH GD +L P+ V L G + VACG + ALT
Sbjct: 3119 TSSGELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3173
Query: 300 SKGALYAWGGSQAGQLGLG-------PQT---------------RSFSLIPNES------ 331
+G +++WG G+LG G PQ FSL +S
Sbjct: 3174 DEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3233
Query: 332 ------------DTYFRNIPILVVPNGVQLV--ACGHSHTLVYMRDGRIHGWGYNSYGQA 377
D + R ++ G ++V A G H L G+++ WG N +GQ
Sbjct: 3234 GKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQ 3293
Query: 378 ANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
N +T P+ V G+ + ++A G HS
Sbjct: 3294 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3326
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 135/285 (47%), Gaps = 45/285 (15%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+L A N + H A++++G +F+WG + G+LG G + P+ +
Sbjct: 483 LGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMI 542
Query: 109 KQLQ----SEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT 164
L + V I+CG+ +AAI E L+ WG+ N+ RL G+
Sbjct: 543 SALSGKQAGKHVVHIACGSTYSAAITAEGE---------LYTWGRG---NYGRLGHGSSE 590
Query: 165 PNTI-----------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
TI + VSCGS +A++E G + +WG +YG+LGRG +G + P
Sbjct: 591 DQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTP 649
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
++I+ I +V CG S A++++G+VYTWG G +LGH G +E
Sbjct: 650 KLIEKLQDL--------DIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGH-----GTEE 696
Query: 272 LL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ P+ + L G + DVA G H ALT +++WG + Q
Sbjct: 697 HVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 173/412 (41%), Gaps = 75/412 (18%)
Query: 22 AIYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
IY WG+NH GQ G G E ++++P C A A R + + G + AV +D
Sbjct: 3958 TIYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALATLRPVQLIGGEQTLFAVTAD 4008
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDG 137
G L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 4009 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE------ 4062
Query: 138 TISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
++ WG+ + PR+ + V+ G H ++ G
Sbjct: 4063 ----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACITAAGD 4116
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSE 245
L WG YG+LG G + + L+ P++++ + ++ ++C G+ + +++
Sbjct: 4117 LFTWGKGRYGRLGHGDSEDQLK-PKLVEALQGY--------RVIDIACGSGDAQTLCLTD 4167
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+ V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4168 DDTVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVY 4224
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHT 357
W R + + + SD + R P VQ +A G H
Sbjct: 4225 TWQ-----------VFRDYHRLGHGSDDHVRR------PRQVQGLQGKKVIAIATGSLHC 4267
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
+ DG ++ WG N GQ + + P V G ++ ++A G H+
Sbjct: 4268 VCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 4319
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 127/276 (46%), Gaps = 25/276 (9%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N + P+L + N + H +ALS G + +WG + G+LG G
Sbjct: 472 RVYTQAYNSDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHG 531
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P++I L + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 532 DTVP-LEEPKMISA----LSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 586
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + + +P V L G+ + DV+CG + A+T G +++WG G+LG G
Sbjct: 587 ---GSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 643
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D + V CG ++ +DG+++ WG +
Sbjct: 644 DGCKTPKLIEKLQDL------------DIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLG 691
Query: 379 NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ + YP ++ G +V +AAG H L +
Sbjct: 692 HGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTE 727
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 136/293 (46%), Gaps = 33/293 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++ WG G+ G G L PK + L G AG + + IACG ++AA
Sbjct: 511 LSANGEVFSWGCGDGGRLGH-GDTVPLEEPKMIS-ALSGKQAGKHV--VHIACGSTYSAA 566
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E + P V L+ V +SCG+ +A
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLA------ 620
Query: 137 GTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
++W WG R G TP I I +V CGS +AL++ G +
Sbjct: 621 -VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQV 679
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG + +LG G T E ++ P++++G +K+ V+ G H A++E+ E
Sbjct: 680 YTWGKGDNQRLGHG-TEEHVRYPKLLEGLKG--------KKVIDVAAGSTHCLALTEDSE 730
Query: 249 VYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
V++W GS Q H +L+ E P + LD I +ACG S A +S
Sbjct: 731 VHSW--GSNDQCQHFDTLRVTKPE--PAALPGLDTKHIVGIACGPAQSFAWSS 779
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 134/311 (43%), Gaps = 54/311 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ G +H A++S+G +++WG E G+LG G P ++ L+ V ++ G +
Sbjct: 4049 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4108
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCG 175
A I + L+ WG+ + + RL G P + + ++CG
Sbjct: 4109 ACIT---------AAGDLFTWGKGR---YGRLGHGDSEDQLKPKLVEALQGYRVIDIACG 4156
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + L++ + +WG +YG+LGRG +G + P I + +V
Sbjct: 4157 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVKV 4207
Query: 234 SCGEYHSAAVSENGEVYTWGL-GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
CG S A++++G VYTW + +LGH S D PR+V L G + +A G
Sbjct: 4208 ECGSQFSVALTKSGAVYTWQVFRDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGS 4264
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQL 349
+H T G +Y WG + GQLG G T P LV +
Sbjct: 4265 LHCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKINR 4311
Query: 350 VACGHSHTLVY 360
VACG +HTL +
Sbjct: 4312 VACGSAHTLAW 4322
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 103/222 (46%), Gaps = 46/222 (20%)
Query: 166 NTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAP 225
N + QV+C + LS G + YN GP++++ A +
Sbjct: 451 NLGVVQVACAEKRFLILSRNGRVYTQAYNS-----------DTLGPQLVQSLA-----SR 494
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI 283
+ KI S G +H A+S NGEV++WG G G+LGH GD L P+ + AL G
Sbjct: 495 NIVKIAAHSDG-HHYLALSANGEVFSWGCGDGGRLGH-----GDTVPLEEPKMISALSGK 548
Query: 284 ----FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIP 339
+ +ACG +S A+T++G LY WG G+LG G + + IP
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-------------SSEDQTIP 595
Query: 340 ILVV-PNGVQL--VAC--GHSHTLVYMRDGRIHGWGYNSYGQ 376
+LV G+++ V+C G + TL +G++ WG YG+
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 637
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 111/288 (38%), Gaps = 63/288 (21%)
Query: 186 GLLQAWGYNEYGQLGRGI---------TCEGLQGPRVIK--------------------G 216
G + WG+N GQLG GI CE L R ++ G
Sbjct: 3957 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4015
Query: 217 Y----------AKFLDEAPELEKITQ-------VSCGEYHSAAVSENGEVYTWGLGSVGQ 259
Y + + LE I V+ G H A+S GEVY+WG G+
Sbjct: 4016 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4075
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LGH + D+ PR + +L GI + DVA GG HS +T+ G L+ WG + G+LG G
Sbjct: 4076 LGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACITAAGDLFTWGKGRYGRLGHGD 4132
Query: 320 QTRSFSLIPNESDTYFRNIPILVVPNGVQLVAC--GHSHTLVYMRDGRIHGWGYNSYGQA 377
E+ +R I I AC G + TL D + WG YG+
Sbjct: 4133 SEDQLKPKLVEALQGYRVIDI----------ACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4182
Query: 378 ANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADACSLKELCEFR 424
S P +D G V K+ G S L + ++ FR
Sbjct: 4183 GRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWQVFR 4230
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 94/243 (38%), Gaps = 35/243 (14%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
Q S + H +L E G+ Y + I CEGL V+
Sbjct: 412 QCSSPTSHKGSLQEVIAWGLIGWKYYANVSGPIQCEGLANLGVV---------------- 455
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
QV+C E +S NG VYT S LG +QS L R +V +
Sbjct: 456 -QVACAEKRFLILSRNGRVYTQAYNS-DTLGPQLVQS----LASRNIVKIAA------HS 503
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
G H AL++ G +++WG G+LG G +P E + V +
Sbjct: 504 DGHHYLALSANGEVFSWGCGDGGRLGHG------DTVPLEEPKMISALSGKQAGKHVVHI 557
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSA 409
ACG +++ +G ++ WG +YG+ + S P V G +V ++ G G +
Sbjct: 558 ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQ 617
Query: 410 VLA 412
LA
Sbjct: 618 TLA 620
>gi|344251059|gb|EGW07163.1| putative E3 ubiquitin-protein ligase HERC1 [Cricetulus griseus]
Length = 1016
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 195/430 (45%), Gaps = 70/430 (16%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
MD + T+RP D ++ K +Y+WG GQ GR + +P P
Sbjct: 131 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMVPATAP--------- 179
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
+ S+ + CG T + ++GT+ G +G+LG G + + LQ V +
Sbjct: 180 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQL 239
Query: 120 --SCGAH-CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI---- 168
SCG+ + A+ E E ++ WG ++ +L G P I
Sbjct: 240 VTSCGSDGHSMALTESGE---------VFSWGDG---DYGKLGHGNSDRQRRPRQIEALQ 287
Query: 169 ---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV--IKGYAKFLDE 223
+ Q+SCG H ++ G L +G +YG+LG G T RV ++GY
Sbjct: 288 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY------ 341
Query: 224 APELEKITQVSCGEYHSAAVSENGE-VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG 282
+I QV+CG H+ AVS +G V+ +G G G+LG L + + P++V L G
Sbjct: 342 -----QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCG 393
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL- 341
I IK VACG S ALT G +Y +G Q +GL P+ R+ + + IP+L
Sbjct: 394 IGIKKVACGTQFSVALTKDGHVYTFG--QDRLIGL-PEGRA------RNHNRPQQIPVLA 444
Query: 342 -VVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VR 399
VV ++ VA G HTL G ++ WG NS GQ + + P+ V G+ +R
Sbjct: 445 GVV---IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIR 501
Query: 400 KLAAGGGHSA 409
+++AG HSA
Sbjct: 502 QISAGRCHSA 511
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 142/307 (46%), Gaps = 43/307 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V SDG
Sbjct: 258 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTSDGK 309
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG S
Sbjct: 310 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA----DG----S 361
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNT------IIC-----QVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T + ++C +V+CG+ VAL++ G + +
Sbjct: 362 MVWAFGDG---DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 418
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ I A + I V+ G H+ A++ G+VY
Sbjct: 419 GQDRLIGLPEG-RARNHNRPQQIPVLAGVV--------IEDVAVGAEHTLALASTGDVYA 469
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWGGS 310
WG S GQLG L + P V L G I+ ++ G HS A T+ A G S
Sbjct: 470 WGSNSEGQLG---LGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPVPPRAPGVS 526
Query: 311 QAGQLGL 317
QLGL
Sbjct: 527 VPLQLGL 533
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 98/231 (42%), Gaps = 36/231 (15%)
Query: 191 WGYNEYGQL---GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
WG +GQL GR + AP + QV CG+ + + NG
Sbjct: 157 WGAGRHGQLAEAGRNVMVPA---------------TAPSFSQAQQVICGQNCTFVIQANG 201
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGAL 304
V G GS G+LG + S D +L + AL G + + +CG HS ALT G +
Sbjct: 202 TVLACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEV 258
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 364
++WG G+LG G R R I L VQ+ +CG H+ V DG
Sbjct: 259 FSWGDGDYGKLGHGNSDRQ---------RRPRQIEALQGEEVVQM-SCGFKHSAVVTSDG 308
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
++ +G YG+ ++ P V G ++ ++A G H+ AV AD
Sbjct: 309 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 359
>gi|348676014|gb|EGZ15832.1| hypothetical protein PHYSODRAFT_315997 [Phytophthora sojae]
Length = 614
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 154/358 (43%), Gaps = 33/358 (9%)
Query: 63 RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG 122
R +D+ACG+E TA + DG ++T G N+ GQ GT E L S I G
Sbjct: 68 RVVDVACGNEQTAILFEDGDVYTCGYNDSGQCAIGTTERVPTLRFSPGLSSNRTVRIFSG 127
Query: 123 ---AHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI---ICQVSCGS 176
H A A +G + T + GQ + + + V C
Sbjct: 128 NGSEHLAALHA-----NGNLYTVGFNMRGQLGLGSSTTVMEATLVEELAGKRVADVGCSY 182
Query: 177 VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG 236
H + + G L A G N+YGQLG G G PR ++ + + + V+CG
Sbjct: 183 FHTAIVMDNGDLYACGCNDYGQLGLGDHRNGELVPRPVEYFFR--------RPVLAVACG 234
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHS 295
++++ A +G V +G GQLG S + P R+ A LD + + ++CG H+
Sbjct: 235 QHYTIASLRDGGVVAFGKNDHGQLGLDSTSEPVSQ--PTRLAAPLDRLVVPQLSCGYHHT 292
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS 355
+T GA+Y +G + GQLGLG + ES R + VACG
Sbjct: 293 AVVTEDGAVYTFGRNDYGQLGLGHKMHMARPARVESLARMR----------ITQVACGCY 342
Query: 356 HTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
HTLV DG++ +G N++GQ E S P + + V K+AAG HS L
Sbjct: 343 HTLVLSDDGKVFPFGRNNHGQLGLETSVDCLSPQLISTLRNKTVTKVAAGFYHSVCLV 400
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 140/299 (46%), Gaps = 24/299 (8%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGH--EHTAAVASD 80
+Y GYN SGQ ER P L P +++R + I G+ EH AA+ ++
Sbjct: 88 VYTCGYNDSGQCAIGTTERV--------PTLRFSPGLSSNRTVRIFSGNGSEHLAALHAN 139
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE--NDGT 138
G L+T G N GQLG G+ V++L + V + C TA + + + G
Sbjct: 140 GNLYTVGFNMRGQLGLGSSTTVMEATLVEELAGKRVADVGCSYFHTAIVMDNGDLYACGC 199
Query: 139 ISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQ 198
+L + G PR F + V+CG + +A G + A+G N++GQ
Sbjct: 200 NDYGQLGLGDHRNGELVPRPVEYFF--RRPVLAVACGQHYTIASLRDGGVVAFGKNDHGQ 257
Query: 199 LGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVG 258
LG T E + P + A LD + Q+SCG +H+A V+E+G VYT+G G
Sbjct: 258 LGLDSTSEPVSQPTRL---AAPLDRL----VVPQLSCGYHHTAVVTEDGAVYTFGRNDYG 310
Query: 259 QLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
QLG L P RV +L + I VACG H+ L+ G ++ +G + GQLGL
Sbjct: 311 QLG---LGHKMHMARPARVESLARMRITQVACGCYHTLVLSDDGKVFPFGRNNHGQLGL 366
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 150/340 (44%), Gaps = 32/340 (9%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF---VKSISCGAHCTAAIAEPRENDGTI 139
++++G N +G+L G R P +V S V ++CG TA + E DG +
Sbjct: 33 VYSFGQNTYGELALGDTTDRSAPIRVDLGNSNHGRRVVDVACGNEQTAILFE----DGDV 88
Query: 140 STSRLWVWGQNQGSNFPRLFWGAFTP-----NTIICQVSCGSVHVVALSECGLLQAWGYN 194
T GQ R+ F+P T+ GS H+ AL G L G+N
Sbjct: 89 YTCGYNDSGQCAIGTTERVPTLRFSPGLSSNRTVRIFSGNGSEHLAALHANGNLYTVGFN 148
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
GQLG G + ++ V + K ++ V C +H+A V +NG++Y G
Sbjct: 149 MRGQLGLGSSTTVMEATLVEELAGK---------RVADVGCSYFHTAIVMDNGDLYACGC 199
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG ++G EL+PR V + VACG ++ A G + A+G + GQ
Sbjct: 200 NDYGQLGLGDHRNG--ELVPRPVEYFFRRPVLAVACGQHYTIASLRDGGVVAFGKNDHGQ 257
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL + S + R LVVP ++CG+ HT V DG ++ +G N Y
Sbjct: 258 LGLDSTSEPVSQPTRLAAPLDR----LVVPQ----LSCGYHHTAVVTEDGAVYTFGRNDY 309
Query: 375 GQAANEKSTYAWYPSPVDWCV-GEVRKLAAGGGHSAVLAD 413
GQ + P+ V+ + ++A G H+ VL+D
Sbjct: 310 GQLGLGHKMHMARPARVESLARMRITQVACGCYHTLVLSD 349
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 8/115 (6%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y +G N GQ G G + + P ++ + A R +ACG HT ++ DG
Sbjct: 300 AVYTFGRNDYGQLG-LGHKMHMARPARVE-------SLARMRITQVACGCYHTLVLSDDG 351
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+F +G N GQLG T P+ + L+++ V ++ G + + + P E +
Sbjct: 352 KVFPFGRNNHGQLGLETSVDCLSPQLISTLRNKTVTKVAAGFYHSVCLVGPTEGE 406
>gi|444516740|gb|ELV11273.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
Length = 3151
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 161/364 (44%), Gaps = 55/364 (15%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC-- 121
+ +A G + AV +G ++ G G+LG G G P +V L S VK ++
Sbjct: 1300 VQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPLPRQVTALSSYVVKKVAVHS 1359
Query: 122 -GAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIIC 170
G H TA DG +++ WG+ PRL T I
Sbjct: 1360 GGRHATALTV-----DG-----KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IR 1407
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
++CGS H AL+ G L WG EYG+LG G T L+ P+++K ++
Sbjct: 1408 DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDTTTQLK-PKMVKVLLG--------HRV 1458
Query: 231 TQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
QV+CG + + A+++ G V++WG G G+LG + + +P+ + L+G + +
Sbjct: 1459 VQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQI 1515
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
CG S ALT G ++ WG +LG G SD + R ++ G +
Sbjct: 1516 ECGAQFSLALTKSGVVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRGKK 1563
Query: 349 LV--ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGG 405
+V A G H L G+++ WG N +GQ N +T P+ V G+ + ++A G
Sbjct: 1564 IVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGS 1623
Query: 406 GHSA 409
HS
Sbjct: 1624 SHSV 1627
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 1373 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 1424
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 1425 LYTWGLGEYGRLGHGDTTTQLKPKMVKVLLGHRVVQVACGSRDAQTLALTDEG------- 1477
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 1478 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 1534
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV+++G+VY
Sbjct: 1535 GKGDYFRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDSGQVYA 1585
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 1586 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 1631
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 147/307 (47%), Gaps = 47/307 (15%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ G H A+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +
Sbjct: 1357 VHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHS 1416
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCG 175
AA+ S+ L+ WG + + RL G T P + + QV+CG
Sbjct: 1417 AALT---------SSGELYTWGLGE---YGRLGHGDTTTQLKPKMVKVLLGHRVVQVACG 1464
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S +AL++ GL+ +WG ++G+LGRG EG P+ I E + + Q+
Sbjct: 1465 SRDAQTLALTDEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQI 1515
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G V+TWG G +LGH S K P+ V L G I VA G +
Sbjct: 1516 ECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGAL 1572
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG 353
H A+T G +YAWG + GQ G G T N T + + + VACG
Sbjct: 1573 HCLAVTDSGQVYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACG 1622
Query: 354 HSHTLVY 360
SH++ +
Sbjct: 1623 SSHSVAW 1629
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 143/327 (43%), Gaps = 50/327 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +D+A G H+A V + G
Sbjct: 2368 VYSWGEAEDGKLGHGSRSPCDR------PRVIESLRGIEV--VDVAAGGAHSACVTAAGD 2419
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG E + P+ V+ LQ V I+CG+ + +D T+
Sbjct: 2420 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVGIACGSGDAQTLC--LTDDDTV--- 2474
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 2475 --WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVRVECGSQFSVALTKAGAVYTWGKG 2532
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K ++ G H +E+GEVYTWG
Sbjct: 2533 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKAIAIATGSLHCVCCTEDGEVYTWGD 2583
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G + VACG H+ AW S+
Sbjct: 2584 NDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAWSTSKPAS 2631
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPIL 341
G P + +P E + + + +P++
Sbjct: 2632 AGKLP-----AQVPMEYN-HLQELPVI 2652
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 177/412 (42%), Gaps = 78/412 (18%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P C A A R + + G + AV +DG
Sbjct: 2262 IYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALAALRPVQLIGGEQTLFAVTADG 2312
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 2313 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE------- 2365
Query: 139 ISTSRLWVWGQNQGSNFPRLFWGAFTP-----------NTIICQVSCGSVHVVALSECGL 187
++ WG+ + +L G+ +P + V+ G H ++ G
Sbjct: 2366 ---GEVYSWGEAEDG---KLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGD 2419
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSE 245
L WG YG+LG + + L+ P+++ EA + ++ ++C G+ + +++
Sbjct: 2420 LYTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVVGIACGSGDAQTLCLTD 2470
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+ V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 2471 DDTVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVRVECGSQFSVALTKAGAVY 2527
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHT 357
WG +LG G SD + R P VQ +A G H
Sbjct: 2528 TWGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKAIAIATGSLHC 2569
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
+ DG ++ WG N GQ + + P V G +V ++A G H+
Sbjct: 2570 VCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 2621
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 106/210 (50%), Gaps = 21/210 (10%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ QV+ GS + A++ G + A G G+LG G++ + PR + + ++
Sbjct: 1299 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPLPRQVTALSSYV------V 1352
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
K V G H+ A++ +G+V++WG G G+LGH S + DK PR + AL I+D+
Sbjct: 1353 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDI 1409
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
ACG HS ALTS G LY WG + G+LG G T + + +L+ VQ
Sbjct: 1410 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDTTTQLKP---------KMVKVLLGHRVVQ 1460
Query: 349 LVACG--HSHTLVYMRDGRIHGWGYNSYGQ 376
VACG + TL +G + WG +G+
Sbjct: 1461 -VACGSRDAQTLALTDEGLVFSWGDGDFGK 1489
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 126/308 (40%), Gaps = 49/308 (15%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHC 125
+ G +H A++S+G +++WG E G+LG G+ P ++ L+ E V + GAH
Sbjct: 2352 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHS 2411
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCG 175
A L+ WG+ + P+L + G
Sbjct: 2412 ACVTA----------AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVGIACGSG 2461
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
+ L++ + +WG +YG+LGRG +G + P I + +V C
Sbjct: 2462 DAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVRVEC 2512
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
G S A+++ G VYTWG G +LGH S D PR+V L G +A G +H
Sbjct: 2513 GSQFSVALTKAGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKAIAIATGSLHC 2569
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLVAC 352
T G +Y WG + GQLG G T P LV V VAC
Sbjct: 2570 VCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRVAC 2616
Query: 353 GHSHTLVY 360
G +HTL +
Sbjct: 2617 GSAHTLAW 2624
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 110/281 (39%), Gaps = 69/281 (24%)
Query: 186 GLLQAWGYNEYGQLGRGI---------TCEGLQGPRVIK--------------------G 216
G + WG+N GQLG GI CE L R ++ G
Sbjct: 2260 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATG 2318
Query: 217 Y----------AKFLDEAPELEKITQ-------VSCGEYHSAAVSENGEVYTWGLGSVGQ 259
Y + + LE I V+ G H A+S GEVY+WG G+
Sbjct: 2319 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 2378
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LGH S D+ PR + +L GI + DVA GG HS +T+ G LY WG + G+LG
Sbjct: 2379 LGHGSRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG--- 2432
Query: 320 QTRSFSLIPNESDTYFRNIPILVVP---NGVQLVAC--GHSHTLVYMRDGRIHGWGYNSY 374
SD+ + P LV + V +AC G + TL D + WG Y
Sbjct: 2433 ----------HSDSEDQLKPKLVEALQGHRVVGIACGSGDAQTLCLTDDDTVWSWGDGDY 2482
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADA 414
G+ S P +D G V ++ G S L A
Sbjct: 2483 GKLGRGGSDGCKVPMKIDSLTGLGVVRVECGSQFSVALTKA 2523
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG + G G + +R P+Q+ + + IA G H DG
Sbjct: 2525 AVYTWGKGDYHRLGH-GSDDHVRRPRQVQ-------GLQGKKAIAIATGSLHCVCCTEDG 2576
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
++TWG N+ GQLGDGT + P V LQ + V ++CG+ T A
Sbjct: 2577 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 2623
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 83/218 (38%), Gaps = 62/218 (28%)
Query: 246 NGEVYTWGLGSVGQLG--------------------HCSLQSGDKELL------------ 273
+G +Y WG GQLG L G++ L
Sbjct: 2259 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATG 2318
Query: 274 -----------------PRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWGGSQAGQ 314
P + ++ +FIK VA GG H AL+S+G +Y+WG ++ G+
Sbjct: 2319 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 2378
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LG G +RS P ++ R I ++ VA G +H+ G ++ WG Y
Sbjct: 2379 LGHG--SRSPCDRPRVIES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRY 2428
Query: 375 GQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
G+ + S P V+ G V +A G G + L
Sbjct: 2429 GRLGHSDSEDQLKPKLVEALQGHRVVGIACGSGDAQTL 2466
>gi|57242759|ref|NP_060661.3| RCC1 and BTB domain-containing protein 1 [Homo sapiens]
gi|114649667|ref|XP_001155108.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 3 [Pan
troglodytes]
gi|397476979|ref|XP_003809865.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Pan paniscus]
gi|74751227|sp|Q8NDN9.1|RCBT1_HUMAN RecName: Full=RCC1 and BTB domain-containing protein 1; AltName:
Full=Chronic lymphocytic leukemia deletion region gene 7
protein; Short=CLL deletion region gene 7 protein;
AltName: Full=Regulator of chromosome condensation and
BTB domain-containing protein 1
gi|21739270|emb|CAD38683.1| hypothetical protein [Homo sapiens]
gi|117646918|emb|CAL37574.1| hypothetical protein [synthetic construct]
gi|208965426|dbj|BAG72727.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [synthetic construct]
gi|410208766|gb|JAA01602.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410264076|gb|JAA20004.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410293802|gb|JAA25501.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410338539|gb|JAA38216.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
Length = 531
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 141/304 (46%), Gaps = 39/304 (12%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V + +F +G N LG G + P+K++ L + +KS+S G+ ++ D
Sbjct: 37 VTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLST---ED 93
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQV---SCGSVHVVALSECGL 187
G + + WG N G+ + N +I QV +CGS H +AL+ G
Sbjct: 94 GVV-----YAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGE 148
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWGYN GQ+G G T PR + ++++ ++CG+ S AV +NG
Sbjct: 149 VFAWGYNNCGQVGSGSTANQ-PTPRKVT-------NCLHIKRVVGIACGQTSSMAVLDNG 200
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
EVY WG GQLG L + +L P RV AL + + + CG H+ ALT +G LYAW
Sbjct: 201 EVYGWGYNGNGQLG---LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAW 257
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRI 366
G + GQLG G + S P + V++ AC +HT + G +
Sbjct: 258 GANTYGQLGTGNKNNLLS--PAHIMVEKERV--------VEIAACHSAHTSAAKTQGGHV 307
Query: 367 HGWG 370
+ WG
Sbjct: 308 YMWG 311
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 126/269 (46%), Gaps = 37/269 (13%)
Query: 148 GQNQGSNFPRLFWGAFTPNTIICQVSCGS-VHVVALSECGLLQAWGYNEYGQLGRGITCE 206
G NQ + P+ G I +S GS HV+ +E G++ AWG+N Y QLG G T +
Sbjct: 57 GDNQSTLVPKKLEGLCGKK--IKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQ 114
Query: 207 GLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQ 266
G+ +V ++++ +V+CG +HS A++ +GEV+ WG + GQ+G S
Sbjct: 115 GIAPVQVCTNLL--------IKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTA 166
Query: 267 SGDKELLPRRVVALDGIFIKDV---ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRS 323
+ + PR+V + + IK V ACG S A+ G +Y WG + GQLGLG
Sbjct: 167 N---QPTPRKVT--NCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ 221
Query: 324 FSLIPNESDTYFRNIPILVVPNG---VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANE 380
+ P+ V V + CG++HTL +G ++ WG N+YGQ
Sbjct: 222 LT-------------PVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268
Query: 381 KSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
SP V + R + HSA
Sbjct: 269 NKNNLL--SPAHIMVEKERVVEIAACHSA 295
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 113/452 (25%), Positives = 177/452 (39%), Gaps = 69/452 (15%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG+N Q G G Q P Q+ C + +++ACG H+ A+A+DG
Sbjct: 95 VVYAWGHNGYSQLGN-GTTNQGIAPVQV------CTNLLIKQVVEVACGSHHSMALAADG 147
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+F WG N GQ+G G+ + P KV L + V I+CG + A+ + E G
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYG--- 204
Query: 141 TSRLWVWGQN------QGSNFPRLFWGAFTPNTIIC--QVSCGSVHVVALSECGLLQAWG 192
WG N G+N +L +C Q+ CG H +AL++ GLL AWG
Sbjct: 205 ------WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G L ++ E E++ ++ +C H SAA ++ G VY
Sbjct: 259 ANTYGQLGTGNKNNLLSPAHIM----------VEKERVVEIAACHSAHTSAAKTQGGHVY 308
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC-GGVHSCALTSKGALYAWGG 309
W G C G +LP + +C V +C T +
Sbjct: 309 MW--------GQC---RGQSVILPH---------LTHFSCTDDVFACFATPAVSWRLLSV 348
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFR-NIPILVVPNGVQLVACGHSHTLVYMRDGRIHG 368
L + + P +D FR + + V V + C H ++
Sbjct: 349 EHEDFLTVAESLKKEFDSPETADLKFRIDGKYIHVHKAVLKIRCEHFRSMFQSY------ 402
Query: 369 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL----AAGGGHSAVLADACSLKELCEFR 424
W + ++ +Y Y + + + + L A G A LK+LC+
Sbjct: 403 WNEDMKEVIEIDQFSYPVYRAFLQYLYTDTVDLPPEDAIGLLDLATSYCENRLKKLCQHI 462
Query: 425 LAESVTLSNASEIEDVASRTGSEALARLCERL 456
+ +T+ NA + A R +E L C +
Sbjct: 463 IKRGITVENAFSLFSAAVRYDAEDLEEFCFKF 494
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 140/334 (41%), Gaps = 46/334 (13%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G +A + ++V+G N+S G G + +PK+L G + L
Sbjct: 26 VFGTSASEALYVTDNDEVFVFGLNYSNCLG-TGDNQSTLVPKKLEG-----LCGKKIKSL 79
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV-KQLQSEFVKSISCGAH 124
G H DG ++ WG N + QLG+GT P +V L + V ++CG+H
Sbjct: 80 SYGSG-PHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSH 138
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQ------GSN----FPRLFWGAFTPNTIICQVSC 174
+ A+A E ++ WG N GS PR ++ ++C
Sbjct: 139 HSMALAADGE---------VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVV-GIAC 188
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G +A+ + G + WGYN GQLG G L RV A + Q+
Sbjct: 189 GQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRV---------AALHSVCVNQIV 239
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGG 292
CG H+ A+++ G +Y WG + GQLG +G+K L P ++ ++ AC
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLG-----TGNKNNLLSPAHIMVEKERVVEIAACHS 294
Query: 293 VH-SCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
H S A T G +Y WG + GQ + P FS
Sbjct: 295 AHTSAAKTQGGHVYMWGQCR-GQSVILPHLTHFS 327
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 17/173 (9%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHSCALT 299
V++N EV+ +GL LG +GD + L+P+++ L G IK ++ G G H T
Sbjct: 37 VTDNDEVFVFGLNYSNCLG-----TGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLST 91
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
G +YAWG + QLG G + + + ++ L++ V+ VACG H++
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTN--------LLIKQVVE-VACGSHHSMA 142
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
DG + WGYN+ GQ + + P V C+ R + G ++ +A
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMA 195
>gi|356569687|ref|XP_003553028.1| PREDICTED: uncharacterized protein LOC100797223 [Glycine max]
Length = 1043
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 151/327 (46%), Gaps = 42/327 (12%)
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
+IA G +H A G +F WG ++G+LG + P+ V L VK+++CG +
Sbjct: 308 NIALGGKHAALATKQGEVFCWGHGKWGRLGQKIDMDISSPKIVDSLNGLHVKNVACGEYH 367
Query: 126 TAAIAEPRE-----NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVV 180
T A+ + E ND + + L + G+ + P+ G+ I V+CG H
Sbjct: 368 TCALTDSGEVYTWGND--VCCADLLIEGRTRSQWIPQKLGGSLD-GISISSVACGEWHTA 424
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
+S CG L +G +G LG G P+ ++ + ++ +CG +H+
Sbjct: 425 IVSSCGRLFTYGDGTFGVLGHG-DLRSYSSPKEVESLSGL--------RVRSAACGSWHT 475
Query: 241 AAVSE-----------NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
AA+ E +G+++TWG G G+LGH + +G K L+P RV L V+
Sbjct: 476 AAIVEVMFDRFRYNSASGKLFTWGDGDEGRLGH--VDNGSK-LVPTRVTQLVDYDFVQVS 532
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
CG + + ALT+ G ++A G ++ GQLG P R +++ + + V++
Sbjct: 533 CGRMLTVALTNMGKVFAMGSAKYGQLG-NPHARDKAVM----------VEGQLKQEFVKV 581
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
++ G H V G ++ WG GQ
Sbjct: 582 ISTGSYHVAVLTSGGSVYTWGRGENGQ 608
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 131/288 (45%), Gaps = 30/288 (10%)
Query: 23 IYVWGYNHS-GQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG + +GR R IP++L L G + +ACG HTA V+S G
Sbjct: 377 VYTWGNDVCCADLLIEGRTRSQWIPQKLGGSLDGISISS------VACGEWHTAIVSSCG 430
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
LFT+G FG LG G P++V+ L V+S +CG+ TAAI E + ++
Sbjct: 431 RLFTYGDGTFGVLGHGDLRSYSSPKEVESLSGLRVRSAACGSWHTAAIVEVMFDRFRYNS 490
Query: 142 S--RLWVWGQNQGSNFPRLFWGA-FTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+ +L+ WG + G+ P + QVSCG + VAL+ G + A
Sbjct: 491 ASGKLFTWGDGDEGRLGHVDNGSKLVPTRVTQLVDYDFVQVSCGRMLTVALTNMGKVFAM 550
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +YGQLG P + A ++ + E + +S G YH A ++ G VYT
Sbjct: 551 GSAKYGQLG---------NPHA-RDKAVMVEGQLKQEFVKVISTGSYHVAVLTSGGSVYT 600
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT 299
WG G GQLG L + P V AL + + CG + A++
Sbjct: 601 WGRGENGQLG---LGDTEDRYTPCFVEALRDRQVNTITCGPSFTAAIS 645
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 101/216 (46%), Gaps = 16/216 (7%)
Query: 202 GITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG 261
GI E PR+ K L+ L+ + ++ G H+A ++ GEV+ WG G G+LG
Sbjct: 279 GIVNERFVQPRIYSLVPKLLESTAMLD-VHNIALGGKHAALATKQGEVFCWGHGKWGRLG 337
Query: 262 HCSLQSGDKEL-LPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ-AGQLGLGP 319
Q D ++ P+ V +L+G+ +K+VACG H+CALT G +Y WG L +
Sbjct: 338 ----QKIDMDISSPKIVDSLNGLHVKNVACGEYHTCALTDSGEVYTWGNDVCCADLLIEG 393
Query: 320 QTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAAN 379
+TRS IP + I I VACG HT + GR+ +G ++G +
Sbjct: 394 RTRS-QWIPQKLGGSLDGISI-------SSVACGEWHTAIVSSCGRLFTYGDGTFGVLGH 445
Query: 380 EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADA 414
P V+ G VR A G H+A + +
Sbjct: 446 GDLRSYSSPKEVESLSGLRVRSAACGSWHTAAIVEV 481
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 17/128 (13%)
Query: 248 EVYTWGLGS---VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
+V WG G VG + +Q L+P+ + + + + ++A GG H+ T +G +
Sbjct: 266 DVMIWGGGIGCLVGIVNERFVQPRIYSLVPKLLESTAMLDVHNIALGGKHAALATKQGEV 325
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMR 362
+ WG + G+LG + D + I+ NG+ + VACG HT
Sbjct: 326 FCWGHGKWGRLG------------QKIDMDISSPKIVDSLNGLHVKNVACGEYHTCALTD 373
Query: 363 DGRIHGWG 370
G ++ WG
Sbjct: 374 SGEVYTWG 381
>gi|282722850|gb|ADA84471.1| retinitis pigmentosa GTPase regulator protein 1 [Danio rerio]
Length = 1697
Score = 115 bits (289), Expect = 4e-23, Method: Composition-based stats.
Identities = 112/351 (31%), Positives = 158/351 (45%), Gaps = 31/351 (8%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
I+CG H+A V G LF +G N GQLG + P VK L+ E +S++CG T
Sbjct: 39 ISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIKGPVTKPVCVKVLKGERAQSVACGTDHT 98
Query: 127 AAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
E G S +L + N +F RL F I +S G AL+E
Sbjct: 99 LVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRL--RPFCDYAPIKLLSAGDHTSAALTE 156
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G L WG N GQLG G L + G + I VSCG HSA V+
Sbjct: 157 DGRLFLWGDNSAGQLGFGNDSHALLPQELNMG-----------QSIHWVSCGYRHSALVT 205
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
++G+VYT+G + G+LG + Q + P+RV +L + VACGG H+ ALT + L
Sbjct: 206 DSGDVYTFGESADGRLGLSAHQLANHS-YPQRVESLRSVL--QVACGGKHTLALT-EDEL 261
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 364
Y +GG + GQLGLG F + +FR + V V CG H+ + G
Sbjct: 262 YCFGGGEFGQLGLG--MLVFVADSPVAVGHFRK-------DRVTHVTCGEQHSALITDSG 312
Query: 365 RIHGWGYNSYGQA--ANEKSTYAWYPSPVD-WCVGEVRKLAAGGGHSAVLA 412
++ +G +G+ +E T + P+ + V +A G H V A
Sbjct: 313 LLYTFGDGRHGKLGHGDENFTNQFTPTVCQRFFEYSVMTVACGSSHMLVFA 363
>gi|417407323|gb|JAA50277.1| Putative rcc1 and btb domain-containing protein 2, partial
[Desmodus rotundus]
Length = 511
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 107/215 (49%), Gaps = 22/215 (10%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H+V + G + WG+N Y QLG G T G + + +++ +V+CG
Sbjct: 96 HIVLATTEGEVFTWGHNAYNQLGNGTTNHGSVPCHISTNLSN--------KQVIEVACGS 147
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHSC 296
YHS ++ +GEV+ WG + GQ+G S + +PRRV L + ++ACG + S
Sbjct: 148 YHSLVLTSDGEVFAWGCNNSGQVGS---GSTANQPIPRRVTGCLQNRVVVNIACGQMCSM 204
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G +Y WG + GQLGLG + + R VQ VACG++H
Sbjct: 205 AVVDSGEVYVWGYNGNGQLGLGSSGNHSTPCRIAALQGIR----------VQRVACGYAH 254
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
TLV DG+++ WG NSYGQ + YP+PV
Sbjct: 255 TLVLTDDGQVYAWGANSYGQLGTGNKSNQSYPTPV 289
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 133/303 (43%), Gaps = 49/303 (16%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTAAIAEPRENDGTIS 140
+F G N G LG G + P ++ L + + +S G+ H A E
Sbjct: 53 IFVLGTNCCGCLGLGDIQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTE--------- 103
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVS------------CGSVHVVALSECGLL 188
++ WG N + +L G ++ C +S CGS H + L+ G +
Sbjct: 104 -GEVFTWGHNA---YNQLGNGTTNHGSVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 159
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
AWG N GQ+G G T PR + G + + ++CG+ S AV ++GE
Sbjct: 160 FAWGCNNSGQVGSGSTANQ-PIPRRVTG-------CLQNRVVVNIACGQMCSMAVVDSGE 211
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
VY WG GQLG L S P R+ AL GI ++ VACG H+ LT G +YAWG
Sbjct: 212 VYVWGYNGNGQLG---LGSSGNHSTPCRIAALQGIRVQRVACGYAHTLVLTDDGQVYAWG 268
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRIH 367
+ GQLG G N+S+ + ++ +++ AC +HT + G ++
Sbjct: 269 ANSYGQLGTG----------NKSNQSYPTPVVVEKDRIIEIAACHSTHTSAAKTQGGHVY 318
Query: 368 GWG 370
WG
Sbjct: 319 MWG 321
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 115/243 (47%), Gaps = 39/243 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G +P + L +N + +++ACG H+ + SDG
Sbjct: 106 VFTWGHNAYNQLG-NGTTNHGSVPCHISTNL------SNKQVIEVACGSYHSLVLTSDGE 158
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P +V LQ+ V +I+CG C+ A+ + E
Sbjct: 159 VFAWGCNNSGQVGSGSTANQPIPRRVTGCLQNRVVVNIACGQMCSMAVVDSGE------- 211
Query: 142 SRLWVWGQNQGSNFPRLFWGAF-TPNTI-------ICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N G TP I + +V+CG H + L++ G + AWG
Sbjct: 212 --VYVWGYNGNGQLGLGSSGNHSTPCRIAALQGIRVQRVACGYAHTLVLTDDGQVYAWGA 269
Query: 194 NEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G + + P V+ E ++I ++ +C H SAA ++ G VY
Sbjct: 270 NSYGQLGTGNKSNQSYPTPVVV-----------EKDRIIEIAACHSTHTSAAKTQGGHVY 318
Query: 251 TWG 253
WG
Sbjct: 319 MWG 321
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 139/334 (41%), Gaps = 46/334 (13%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G V + I+V G N G G I + P +G L
Sbjct: 36 VFGSAGNEVLYMTVNDEIFVLGTNCCGCLGLGD------IQSTIEPRRLDSLSGKKIACL 89
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAH 124
G H ++G +FTWG N + QLG+GT P + L ++ V ++CG++
Sbjct: 90 SYGSG-PHIVLATTEGEVFTWGHNAYNQLGNGTTNHGSVPCHISTNLSNKQVIEVACGSY 148
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSN----------FPRLFWGAFTPNTIICQVSC 174
+ + +DG + + WG N PR G N ++ ++C
Sbjct: 149 HSLVLT----SDGEV-----FAWGCNNSGQVGSGSTANQPIPRRVTGCLQ-NRVVVNIAC 198
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G + +A+ + G + WGYN GQLG G + R+ A + ++ +V+
Sbjct: 199 GQMCSMAVVDSGEVYVWGYNGNGQLGLGSSGNHSTPCRI---------AALQGIRVQRVA 249
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG 292
CG H+ ++++G+VY WG S GQLG +G+K + P VV I+ AC
Sbjct: 250 CGYAHTLVLTDDGQVYAWGANSYGQLG-----TGNKSNQSYPTPVVVEKDRIIEIAACHS 304
Query: 293 VH-SCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
H S A T G +Y WG + GQ + P S
Sbjct: 305 THTSAAKTQGGHVYMWGQCR-GQSVILPHLTHLS 337
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 68/150 (45%), Gaps = 18/150 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G G P ++ A R +ACG+ HT + DG
Sbjct: 212 VYVWGYNGNGQLGL-GSSGNHSTPCRIA-------ALQGIRVQRVACGYAHTLVLTDDGQ 263
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WGAN +GQLG G + + +P V + ++ +C + T+A
Sbjct: 264 VYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSTHTSA--------AKTQGG 315
Query: 143 RLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 316 HVYMWGQCRGQSVILPHLTHLSCTDDVFAC 345
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 79/178 (44%), Gaps = 21/178 (11%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHSCAL 298
++ N E++ G G LG +QS + PRR+ +L G K +AC G H
Sbjct: 47 MTVNDEIFVLGTNCCGCLGLGDIQS---TIEPRRLDSLSG---KKIACLSYGSGPHIVLA 100
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 358
T++G ++ WG + QLG G T + +P T N ++ V ACG H+L
Sbjct: 101 TTEGEVFTWGHNAYNQLGNG--TTNHGSVPCHISTNLSNKQVIEV-------ACGSYHSL 151
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE--VRKLAAGGGHSAVLADA 414
V DG + WG N+ GQ + + P V C+ V +A G S + D+
Sbjct: 152 VLTSDGEVFAWGCNNSGQVGSGSTANQPIPRRVTGCLQNRVVVNIACGQMCSMAVVDS 209
>gi|395521017|ref|XP_003764618.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Sarcophilus
harrisii]
Length = 531
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 142/304 (46%), Gaps = 39/304 (12%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V +F +G N LG G + P+K++ L + +KS+S G+ ++ D
Sbjct: 37 VTHSDEVFVFGLNCSNCLGTGDNQSTIVPKKLEALCGKKIKSLSYGSGPHVLLST---ED 93
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQV---SCGSVHVVALSECGL 187
G + + WG N G+ + N +I QV +CGS H +AL+ G
Sbjct: 94 GVV-----YAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVIEVACGSHHSMALAADGE 148
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWGYN GQ+G G T PR + ++++ ++CG+ S AV +NG
Sbjct: 149 VYAWGYNNCGQVGSGSTANQ-PTPRKVT-------NCLHIKRVVSIACGQTSSMAVLDNG 200
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
EVY WG GQLG L + +L P RV AL + + + CG H+ ALT +G LYAW
Sbjct: 201 EVYGWGYNGNGQLG---LGNNGNQLTPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAW 257
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRI 366
G + GQLG G ++ S P + + V++ AC +HT + G +
Sbjct: 258 GANTYGQLGTGNKSNLLS--PAQIMVEKERV--------VEIAACHSAHTSAAKTQGGHV 307
Query: 367 HGWG 370
+ WG
Sbjct: 308 YMWG 311
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 114/234 (48%), Gaps = 26/234 (11%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HV+ +E G++ AWG+N Y QLG G T +G+ +V ++++ +V+CG
Sbjct: 86 HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLL--------IKQVIEVACGS 137
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHSC 296
+HS A++ +GEVY WG + GQ+G S + PR+V L + +ACG S
Sbjct: 138 HHSMALAADGEVYAWGYNNCGQVGS---GSTANQPTPRKVTNCLHIKRVVSIACGQTSSM 194
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G +Y WG + GQLGLG L P ++ +L + CG++H
Sbjct: 195 AVLDNGEVYGWGYNGNGQLGLGNNGNQ--LTPCRVAA-LHSVCVL-------QIVCGYAH 244
Query: 357 TLVYMRDGRIHGWGYNSYGQAAN-EKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
TL +G ++ WG N+YGQ KS SP V + R + HSA
Sbjct: 245 TLALTDEGLLYAWGANTYGQLGTGNKSNLL---SPAQIMVEKERVVEIAACHSA 295
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 115/457 (25%), Positives = 181/457 (39%), Gaps = 79/457 (17%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG+N Q G G Q P Q+ L + +++ACG H+ A+A+DG
Sbjct: 95 VVYAWGHNGYSQLGN-GTTNQGIAPIQVCTNLL------IKQVIEVACGSHHSMALAADG 147
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
++ WG N GQ+G G+ + P KV L + V SI+CG + A+ + E G
Sbjct: 148 EVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYG--- 204
Query: 141 TSRLWVWGQN------QGSNFPRLFWGAFTP-------NTIICQVSCGSVHVVALSECGL 187
WG N G+N +L TP + + Q+ CG H +AL++ GL
Sbjct: 205 ------WGYNGNGQLGLGNNGNQL-----TPCRVAALHSVCVLQIVCGYAHTLALTDEGL 253
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSE 245
L AWG N YGQLG G L +++ E E++ ++ +C H SAA ++
Sbjct: 254 LYAWGANTYGQLGTGNKSNLLSPAQIM----------VEKERVVEIAACHSAHTSAAKTQ 303
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC-GGVHSCALTSKGAL 304
G VY W G C G +LP + +C V +C T
Sbjct: 304 GGHVYMW--------GQC---RGQSVILPH---------LTHFSCTDDVFACFATPAVTW 343
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFR-NIPILVVPNGVQLVACGHSHTLVYMRD 363
L + + P+ +D FR + + V V + C H T+
Sbjct: 344 RLLSVEHEDFLTVAESLKKEFDSPDTADLKFRVDGKYIYVHKAVLKIRCEHFRTMFQSY- 402
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL----AAGGGHSAVLADACSLKE 419
W + ++ +Y Y + + + + L A G A LK+
Sbjct: 403 -----WNEDMKEVIEIDQFSYPVYRAFLQYLYTDTVDLPPEDAIGLLDLATSYCENRLKK 457
Query: 420 LCEFRLAESVTLSNASEIEDVASRTGSEALARLCERL 456
LC+ + +T+ NA + A R +E L C +
Sbjct: 458 LCQHIIKRGITVENAFSLLSAAVRYDAEDLEEFCFKF 494
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 82/173 (47%), Gaps = 17/173 (9%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHSCALT 299
V+ + EV+ +GL LG +GD + ++P+++ AL G IK ++ G G H T
Sbjct: 37 VTHSDEVFVFGLNCSNCLG-----TGDNQSTIVPKKLEALCGKKIKSLSYGSGPHVLLST 91
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
G +YAWG + QLG G + + I ++ + V VACG H++
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQ---------VIEVACGSHHSMA 142
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
DG ++ WGYN+ GQ + + P V C+ R ++ G ++ +A
Sbjct: 143 LAADGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMA 195
>gi|224043006|ref|XP_002197493.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Taeniopygia guttata]
Length = 4839
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 134/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3072 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAAITSSGE 3123
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 3124 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 3176
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 3177 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3233
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV++ G+VY
Sbjct: 3234 GKGDYFRLGHGTDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDTGQVYA 3284
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3285 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3330
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 145/327 (44%), Gaps = 50/327 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +DIA G H+A + + G
Sbjct: 4065 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRGIEV--VDIAAGGAHSACITAAGD 4116
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFTWG +G+LG G E + P+ V+ LQ V I+CG+ + +D T+
Sbjct: 4117 LFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLC--LTDDDTV--- 4171
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 4172 --WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4229
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 4230 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4280
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G I VACG H+ AW S+
Sbjct: 4281 NDEGQLGDGTTNAIQR---PRLVAALQGKKINRVACGSAHT---------LAWSTSKPAN 4328
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPIL 341
G P + +P E + + + IPI+
Sbjct: 4329 AGKLP-----TQVPMEYN-HLQEIPII 4349
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 3011 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQI-----TALSNYVVKKVAVHSGGRHAMA 3065
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AAI
Sbjct: 3066 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT------ 3119
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 3120 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3173
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 3174 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 3224
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH + K P+ V L G I VA G +H A+T G
Sbjct: 3225 TKSGVVWTWGKGDYFRLGHGTDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDTGQ 3281
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 3282 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3328
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 173/412 (41%), Gaps = 76/412 (18%)
Query: 22 AIYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
IY WG+NH GQ G G E ++++P C A A R + + G + AV +D
Sbjct: 3958 TIYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALATLRPVQLIGGEQTLFAVTAD 4008
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDG 137
G L+ G G+LG G E P ++ +Q F+K ++ G HC A E
Sbjct: 4009 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSFE------ 4062
Query: 138 TISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
++ WG+ + PR+ + ++ G H ++ G
Sbjct: 4063 ----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDIAAGGAHSACITAAGD 4116
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSE 245
L WG YG+LG G + + L+ P++++ + ++ ++C G+ + +++
Sbjct: 4117 LFTWGKGRYGRLGHGDSEDQLK-PKLVEALQGY--------RVIDIACGSGDAQTLCLTD 4167
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+ V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4168 DDTVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVY 4224
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHT 357
WG +LG G SD + R P VQ +A G H
Sbjct: 4225 TWGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHC 4266
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
+ DG ++ WG N GQ + + P V G ++ ++A G H+
Sbjct: 4267 VCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 4318
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 166/393 (42%), Gaps = 69/393 (17%)
Query: 68 ACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTA 127
A G E A + + +F WG N+ QLG K P + L + V ++ G+
Sbjct: 2952 AAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLF 3009
Query: 128 AIAEPREND--GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
A+ + G + RL + + PR V G H +AL+
Sbjct: 3010 AVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVD 3069
Query: 186 GLLQAWGYNEYGQLGR--GITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
G + +WG + G+LG + C+ PR+I EA + ++I ++CG HSAA+
Sbjct: 3070 GKVFSWGEGDDGKLGHFSRMNCDK---PRLI--------EALKTKRIRDIACGSSHSAAI 3118
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHSCALT 299
+ +GE+YTWGLG G+LGH GD +L P+ V L G + VACG + ALT
Sbjct: 3119 TSSGELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3173
Query: 300 SKGALYAWGGSQAGQLGLG-------PQT---------------RSFSLIPNES------ 331
+G +++WG G+LG G PQ FSL +S
Sbjct: 3174 DEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3233
Query: 332 ------------DTYFRNIPILVVPNGVQLV--ACGHSHTLVYMRDGRIHGWGYNSYGQA 377
D + R ++ G ++V A G H L G+++ WG N +GQ
Sbjct: 3234 GKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQ 3293
Query: 378 ANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
N +T P+ V G+ + ++A G HS
Sbjct: 3294 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3326
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 135/285 (47%), Gaps = 45/285 (15%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+L A N + H A++++G +F+WG + G+LG G + P+ +
Sbjct: 483 LGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMI 542
Query: 109 KQLQ----SEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT 164
L + V I+CG+ +AAI E L+ WG+ N+ RL G+
Sbjct: 543 SALSGKQAGKHVVHIACGSTYSAAITAEGE---------LYTWGRG---NYGRLGHGSSE 590
Query: 165 PNTI-----------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
TI + VSCGS +A++E G + +WG +YG+LGRG +G + P
Sbjct: 591 DQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTP 649
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
++I+ I +V CG S A++++G+VYTWG G +LGH G +E
Sbjct: 650 KLIEKLQDL--------DIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGH-----GTEE 696
Query: 272 LL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ P+ + L G + DVA G H ALT +++WG + Q
Sbjct: 697 HVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 127/276 (46%), Gaps = 25/276 (9%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N + P+L + N + H +ALS G + +WG + G+LG G
Sbjct: 472 RVYTQAYNSDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHG 531
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P++I L + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 532 DTVP-LEEPKMISA----LSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 586
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + + +P V L G+ + DV+CG + A+T G +++WG G+LG G
Sbjct: 587 ---GSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 643
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D + V CG ++ +DG+++ WG +
Sbjct: 644 DGCKTPKLIEKLQDL------------DIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLG 691
Query: 379 NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ + YP ++ G +V +AAG H L +
Sbjct: 692 HGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTE 727
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 134/310 (43%), Gaps = 53/310 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ G +H A++ +G +++WG E G+LG G P ++ L+ V I+ G +
Sbjct: 4049 VNSGGKHCLALSFEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHS 4108
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCG 175
A I + L+ WG+ + + RL G P + + ++CG
Sbjct: 4109 ACIT---------AAGDLFTWGKGR---YGRLGHGDSEDQLKPKLVEALQGYRVIDIACG 4156
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + L++ + +WG +YG+LGRG +G + P I + +V
Sbjct: 4157 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVKV 4207
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G VYTWG G +LGH S D PR+V L G + +A G +
Sbjct: 4208 ECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSL 4264
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLV 350
H T G +Y WG + GQLG G T P LV + V
Sbjct: 4265 HCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKINRV 4311
Query: 351 ACGHSHTLVY 360
ACG +HTL +
Sbjct: 4312 ACGSAHTLAW 4321
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 136/293 (46%), Gaps = 33/293 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++ WG G+ G G L PK + L G AG + + IACG ++AA
Sbjct: 511 LSANGEVFSWGCGDGGRLGH-GDTVPLEEPKMIS-ALSGKQAGKHV--VHIACGSTYSAA 566
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E + P V L+ V +SCG+ +A
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLA------ 620
Query: 137 GTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
++W WG R G TP I I +V CGS +AL++ G +
Sbjct: 621 -VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQV 679
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG + +LG G T E ++ P++++G +K+ V+ G H A++E+ E
Sbjct: 680 YTWGKGDNQRLGHG-TEEHVRYPKLLEGLKG--------KKVIDVAAGSTHCLALTEDSE 730
Query: 249 VYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
V++W GS Q H +L+ E P + LD I +ACG S A +S
Sbjct: 731 VHSW--GSNDQCQHFDTLRITKPE--PAALPGLDTKHIVGIACGPAQSFAWSS 779
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 103/222 (46%), Gaps = 46/222 (20%)
Query: 166 NTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAP 225
N + QV+C + LS G + YN GP++++ A +
Sbjct: 451 NLGVMQVACAEKRFLILSRNGRVYTQAYNS-----------DTLGPQLVQSLA-----SR 494
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI 283
+ KI S G +H A+S NGEV++WG G G+LGH GD L P+ + AL G
Sbjct: 495 NIVKIAAHSDG-HHYLALSANGEVFSWGCGDGGRLGH-----GDTVPLEEPKMISALSGK 548
Query: 284 ----FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIP 339
+ +ACG +S A+T++G LY WG G+LG G + + IP
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-------------SSEDQTIP 595
Query: 340 ILVV-PNGVQL--VAC--GHSHTLVYMRDGRIHGWGYNSYGQ 376
+LV G+++ V+C G + TL +G++ WG YG+
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 637
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 107/278 (38%), Gaps = 63/278 (22%)
Query: 186 GLLQAWGYNEYGQLGRGI---------TCEGLQGPRVIK--------------------G 216
G + WG+N GQLG GI CE L R ++ G
Sbjct: 3957 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4015
Query: 217 Y----------AKFLDEAPELEKITQ-------VSCGEYHSAAVSENGEVYTWGLGSVGQ 259
Y + + LE I V+ G H A+S GEVY+WG G+
Sbjct: 4016 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSFEGEVYSWGEAEDGK 4075
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LGH + D+ PR + +L GI + D+A GG HS +T+ G L+ WG + G+LG G
Sbjct: 4076 LGHGNRSPCDR---PRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGD 4132
Query: 320 QTRSFSLIPNESDTYFRNIPILVVPNGVQLVAC--GHSHTLVYMRDGRIHGWGYNSYGQA 377
E+ +R I I AC G + TL D + WG YG+
Sbjct: 4133 SEDQLKPKLVEALQGYRVIDI----------ACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4182
Query: 378 ANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADA 414
S P +D G V K+ G S L +
Sbjct: 4183 GRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4220
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 94/243 (38%), Gaps = 35/243 (14%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
Q S + H +L E G+ Y + I CEGL V+
Sbjct: 412 QCSSPTSHKGSLQEVIAWGLIGWKYYANVSGPIQCEGLANLGVM---------------- 455
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
QV+C E +S NG VYT S LG +QS L R +V +
Sbjct: 456 -QVACAEKRFLILSRNGRVYTQAYNS-DTLGPQLVQS----LASRNIVKIAA------HS 503
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
G H AL++ G +++WG G+LG G +P E + V +
Sbjct: 504 DGHHYLALSANGEVFSWGCGDGGRLGHG------DTVPLEEPKMISALSGKQAGKHVVHI 557
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSA 409
ACG +++ +G ++ WG +YG+ + S P V G +V ++ G G +
Sbjct: 558 ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQ 617
Query: 410 VLA 412
LA
Sbjct: 618 TLA 620
>gi|13699242|gb|AAK38372.1|AF334406_1 CLLL7 protein [Homo sapiens]
gi|14275565|emb|CAC40027.1| guanine nucleotide exchange factor [Homo sapiens]
gi|21756194|dbj|BAC04833.1| unnamed protein product [Homo sapiens]
gi|119629234|gb|EAX08829.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Homo sapiens]
Length = 531
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 141/304 (46%), Gaps = 39/304 (12%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V + +F +G N LG G + P+K++ L + +KS+S G+ ++ D
Sbjct: 37 VTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLST---ED 93
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQV---SCGSVHVVALSECGL 187
G + + WG N G+ + N +I QV +CGS H +AL+ G
Sbjct: 94 GVV-----YAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGE 148
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWGYN GQ+G G T PR + ++++ ++CG+ S AV +NG
Sbjct: 149 VFAWGYNNCGQVGSGSTANQ-PTPRKVT-------NCLHIKRVVGIACGQTSSMAVLDNG 200
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
EVY WG GQLG L + +L P RV AL + + + CG H+ ALT +G LYAW
Sbjct: 201 EVYGWGYNGNGQLG---LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAW 257
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRI 366
G + GQLG G + S P + V++ AC +HT + G +
Sbjct: 258 GANTYGQLGTGNKNNLLS--PAHIMVEKERV--------VEIAACHSAHTSAAKTQGGHV 307
Query: 367 HGWG 370
+ WG
Sbjct: 308 YMWG 311
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 126/269 (46%), Gaps = 37/269 (13%)
Query: 148 GQNQGSNFPRLFWGAFTPNTIICQVSCGS-VHVVALSECGLLQAWGYNEYGQLGRGITCE 206
G NQ + P+ G I +S GS HV+ +E G++ AWG+N Y QLG G T +
Sbjct: 57 GDNQSTLVPKKLEGLCGKK--IKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQ 114
Query: 207 GLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQ 266
G+ +V ++++ +V+CG +HS A++ +GEV+ WG + GQ+G S
Sbjct: 115 GIAPVQVCTNLL--------IKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTA 166
Query: 267 SGDKELLPRRVVALDGIFIKDV---ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRS 323
+ + PR+V + + IK V ACG S A+ G +Y WG + GQLGLG
Sbjct: 167 N---QPTPRKVT--NCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ 221
Query: 324 FSLIPNESDTYFRNIPILVVPNG---VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANE 380
+ P+ V V + CG++HTL +G ++ WG N+YGQ
Sbjct: 222 LT-------------PVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268
Query: 381 KSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
SP V + R + HSA
Sbjct: 269 NKNNLL--SPAHIMVEKERVVEIAACHSA 295
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 113/452 (25%), Positives = 177/452 (39%), Gaps = 69/452 (15%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG+N Q G G Q P Q+ C + +++ACG H+ A+A+DG
Sbjct: 95 VVYAWGHNGYSQLGN-GTTNQGIAPVQV------CTNLLIKQVVEVACGSHHSMALAADG 147
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+F WG N GQ+G G+ + P KV L + V I+CG + A+ + E G
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYG--- 204
Query: 141 TSRLWVWGQN------QGSNFPRLFWGAFTPNTIIC--QVSCGSVHVVALSECGLLQAWG 192
WG N G+N +L +C Q+ CG H +AL++ GLL AWG
Sbjct: 205 ------WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G L ++ E E++ ++ +C H SAA ++ G VY
Sbjct: 259 ANTYGQLGTGNKNNLLSPAHIM----------VEKERVVEIAACHSAHTSAAKTQGGHVY 308
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC-GGVHSCALTSKGALYAWGG 309
W G C G +LP + +C V +C T +
Sbjct: 309 MW--------GQC---RGQSVILPH---------LTHFSCTDDVFACFATPAVSWRLLSV 348
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFR-NIPILVVPNGVQLVACGHSHTLVYMRDGRIHG 368
L + + P +D FR + + V V + C H ++
Sbjct: 349 EHEDFLTVAESLKKEFDSPETADLKFRIDGKYIHVHKAVLKIRCEHFRSMFQSY------ 402
Query: 369 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL----AAGGGHSAVLADACSLKELCEFR 424
W + ++ +Y Y + + + + L A G A LK+LC+
Sbjct: 403 WNEDMKEVIEIDQFSYPVYRAFLQYLYTDTVDLPPEDAIGLLDLATSYCENRLKKLCQHI 462
Query: 425 LAESVTLSNASEIEDVASRTGSEALARLCERL 456
+ +T+ NA + A R +E L C +
Sbjct: 463 IKRGITVENAFSLFSAAVRYDAEDLEEFCFKF 494
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 140/334 (41%), Gaps = 46/334 (13%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G +A + ++V+G N+S G G + +PK+L G + L
Sbjct: 26 VFGTSASEALYVTDNDEVFVFGLNYSNCLG-TGDNQSTLVPKKLEG-----LCGKKIKSL 79
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV-KQLQSEFVKSISCGAH 124
G H DG ++ WG N + QLG+GT P +V L + V ++CG+H
Sbjct: 80 SYGSG-PHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSH 138
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQ------GSN----FPRLFWGAFTPNTIICQVSC 174
+ A+A E ++ WG N GS PR ++ ++C
Sbjct: 139 HSMALAADGE---------VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVV-GIAC 188
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G +A+ + G + WGYN GQLG G L RV A + Q+
Sbjct: 189 GQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRV---------AALHSVCVNQIV 239
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGG 292
CG H+ A+++ G +Y WG + GQLG +G+K L P ++ ++ AC
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLG-----TGNKNNLLSPAHIMVEKERVVEIAACHS 294
Query: 293 VH-SCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
H S A T G +Y WG + GQ + P FS
Sbjct: 295 AHTSAAKTQGGHVYMWGQCR-GQSVILPHLTHFS 327
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 17/193 (8%)
Query: 223 EAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVAL 280
E + K+ + V++N EV+ +GL LG +GD + L+P+++ L
Sbjct: 17 EIASIRKVCVFGTSASEALYVTDNDEVFVFGLNYSNCLG-----TGDNQSTLVPKKLEGL 71
Query: 281 DGIFIKDVACG-GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIP 339
G IK ++ G G H T G +YAWG + QLG G + + + ++
Sbjct: 72 CGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTN------- 124
Query: 340 ILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVR 399
L++ V+ VACG H++ DG + WGYN+ GQ + + P V C+ R
Sbjct: 125 -LLIKQVVE-VACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKR 182
Query: 400 KLAAGGGHSAVLA 412
+ G ++ +A
Sbjct: 183 VVGIACGQTSSMA 195
>gi|297816858|ref|XP_002876312.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297322150|gb|EFH52571.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 482
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 167/372 (44%), Gaps = 60/372 (16%)
Query: 38 GRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANE------- 90
G+ + P LPPE+ C A + W H AV + ++TWG E
Sbjct: 98 GKHGETPEPFPLPPEV--CVQKAEAGW-------AHCVAVTENQEVYTWGWRECIPTGRV 148
Query: 91 FGQL-GDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQ 149
FGQ GD E + + KS ++ A EP + IS S+
Sbjct: 149 FGQADGDSCERNISFSTEQVSPTCQGRKSSGGTSYQVEARGEPTKKR-RISPSKQAAENA 207
Query: 150 NQGSN-----FPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGIT 204
+Q N P L + P I V+ G H +ALS+ G + WGY GQLG G
Sbjct: 208 SQSDNIDLSALPCLV--SLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR 265
Query: 205 CEGLQGPRVI---------KGYAKFLDEAPELE-------KITQVSCGEYHSAAVSENGE 248
+ P I K + ++ + E++ + +++CG HSA +++ G
Sbjct: 266 VRLVSSPHPIPCIEPSSYGKATSSGVNMSSEVQCARVLGSYVKKIACGGRHSAVITDTGA 325
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
+ T+G G GQ C S D EL P V +L GI I++VA G H+ ++ G +Y++G
Sbjct: 326 LLTFGWGLYGQ---CGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTICASADGDVYSFG 382
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN----GVQLVACGHSHTLVYMRDG 364
G+Q GQLG G ++++T + +L PN V++++CG HT V +G
Sbjct: 383 GNQFGQLGTG---------CDQAETLPK---LLEAPNLENVNVKIISCGARHTAVIADEG 430
Query: 365 RIHGWGYNSYGQ 376
++ WG+N YGQ
Sbjct: 431 KVFCWGWNKYGQ 442
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 133/304 (43%), Gaps = 63/304 (20%)
Query: 63 RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG 122
R + +A G HT A++ G ++ WG GQLG G+ +V+ + S I C
Sbjct: 229 RIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS--------RVRLVSSPH--PIPC- 277
Query: 123 AHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVAL 182
EP S+ G N A + + +++CG H +
Sbjct: 278 -------IEPSSYGKATSS----------GVNMSSEVQCARVLGSYVKKIACGGRHSAVI 320
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
++ G L +G+ YGQ G+G T + L P + +I +V+ G +H+
Sbjct: 321 TDTGALLTFGWGLYGQCGQGSTDDELS-PTCVSSLLGI--------RIEEVAAGLWHTIC 371
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA--LDGIFIKDVACGGVHSCALTS 300
S +G+VY++G GQLG Q+ E LP+ + A L+ + +K ++CG H+ +
Sbjct: 372 ASADGDVYSFGGNQFGQLGTGCDQA---ETLPKLLEAPNLENVNVKIISCGARHTAVIAD 428
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-----VPNGVQLVACGHS 355
+G ++ WG ++ GQLGLG D RN P V VP +ACG
Sbjct: 429 EGKVFCWGWNKYGQLGLG-------------DVIDRNAPSEVRIKDCVPKN---IACGWW 472
Query: 356 HTLV 359
HTL+
Sbjct: 473 HTLL 476
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 99/241 (41%), Gaps = 38/241 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLP---PELFG--------------CPAGANSRWL 65
++ WGY GQ G R R + P +P P +G C S
Sbjct: 249 VWGWGYGGEGQLGLGSRVRLVSSPHPIPCIEPSSYGKATSSGVNMSSEVQCARVLGSYVK 308
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA-H 124
IACG H+A + G L T+G +GQ G G+ + P V L ++ ++ G H
Sbjct: 309 KIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWH 368
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQ-----NQGSNFPRLFWGAFTPNTIICQVSCGSVHV 179
A A DG + + +GQ +Q P+L N + +SCG+ H
Sbjct: 369 TICASA-----DGDVYSFGGNQFGQLGTGCDQAETLPKLLEAPNLENVNVKIISCGARHT 423
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
+++ G + WG+N+YGQLG G + R + D P+ ++CG +H
Sbjct: 424 AVIADEGKVFCWGWNKYGQLGLGDVID-----RNAPSEVRIKDCVPK-----NIACGWWH 473
Query: 240 S 240
+
Sbjct: 474 T 474
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 99/431 (22%), Positives = 150/431 (34%), Gaps = 119/431 (27%)
Query: 15 DNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIA---CGH 71
+ + + +Y+WGY Q R P P E+ P S W D++ CG
Sbjct: 21 EEVVGQRLVYMWGYLPGAS--------QQRSPLMSPVEV-KIPPAVESSWKDVSGGGCGF 71
Query: 72 EHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
A A G L TWG+ + LG KH E E
Sbjct: 72 --AMATAESGKLITWGSTD--DLGQSYVTSGKHGE----------------------TPE 105
Query: 132 PRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
P FP P + + G H VA++E + W
Sbjct: 106 P----------------------FP------LPPEVCVQKAEAGWAHCVAVTENQEVYTW 137
Query: 192 GYNEYGQLGR------GITCE------------GLQGPRVIKGYAKFLDEAPELEKITQV 233
G+ E GR G +CE QG + G + ++ E K ++
Sbjct: 138 GWRECIPTGRVFGQADGDSCERNISFSTEQVSPTCQGRKSSGGTSYQVEARGEPTKKRRI 197
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
S + + S++ + D LP V G+ I VA GG
Sbjct: 198 SPSKQAAENASQSDNI-------------------DLSALPCLVSLAPGVRIVSVAAGGR 238
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFS---LIP-NESDTYFRNIP---------- 339
H+ AL+ G ++ WG GQLGLG + R S IP E +Y +
Sbjct: 239 HTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPHPIPCIEPSSYGKATSSGVNMSSEVQ 298
Query: 340 -ILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-E 397
V+ + V+ +ACG H+ V G + +G+ YGQ + P+ V +G
Sbjct: 299 CARVLGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIR 358
Query: 398 VRKLAAGGGHS 408
+ ++AAG H+
Sbjct: 359 IEEVAAGLWHT 369
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A +Y +G N GQ G G ++ +PK L P N I+CG HTA +A
Sbjct: 374 ADGDVYSFGGNQFGQLG-TGCDQAETLPK-----LLEAPNLENVNVKIISCGARHTAVIA 427
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG 122
+G +F WG N++GQLG G R P +V+ ++ K+I+CG
Sbjct: 428 DEGKVFCWGWNKYGQLGLGDVIDRNAPSEVR-IKDCVPKNIACG 470
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 120/337 (35%), Gaps = 74/337 (21%)
Query: 130 AEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSC--------GSVHVVA 181
A P+E + + +++WG G++ R + I V G +A
Sbjct: 15 AAPQEEEEVVGQRLVYMWGYLPGASQQRSPLMSPVEVKIPPAVESSWKDVSGGGCGFAMA 74
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
+E G L WG + LG+ G G + PE+ + + G H
Sbjct: 75 TAESGKLITWGSTD--DLGQSYVTSGKHGET-----PEPFPLPPEV-CVQKAEAGWAHCV 126
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLP--RRVVALDGIFIKDVACGGVHSCALT 299
AV+EN EVYTWG +E +P R DG + + T
Sbjct: 127 AVTENQEVYTWGW---------------RECIPTGRVFGQADGDSCERNISFSTEQVSPT 171
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPN----ESDTYFRNIPILVVPNGVQL------ 349
+G + GG+ G T+ + P+ E+ + NI + +P V L
Sbjct: 172 CQGRKSS-GGTSYQVEARGEPTKKRRISPSKQAAENASQSDNIDLSALPCLVSLAPGVRI 230
Query: 350 --VACGHSHTLVYMRDGRIHGWGYNSYGQAA-NEKSTYAWYPSPVDWCV----------- 395
VA G HTL G++ GWGY GQ + P P+ C+
Sbjct: 231 VSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPHPIP-CIEPSSYGKATSS 289
Query: 396 ---------------GEVRKLAAGGGHSAVLADACSL 417
V+K+A GG HSAV+ D +L
Sbjct: 290 GVNMSSEVQCARVLGSYVKKIACGGRHSAVITDTGAL 326
>gi|118095631|ref|XP_413753.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gallus gallus]
Length = 4860
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 138/267 (51%), Gaps = 37/267 (13%)
Query: 65 LDIACGHE-HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA 123
L +CG + H+ A+ G +F+WG ++G+LG G + ++ P +++ LQ E V +SCG
Sbjct: 4083 LVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGF 4142
Query: 124 HCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-----------ICQV 172
+A + DG +L+ +G ++ RL G + + I QV
Sbjct: 4143 KHSAVVTA----DG-----KLFTFGNG---DYGRLGLGNTSNKKLPERVTALEGYQIGQV 4190
Query: 173 SCGSVHVVALSECG-LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
+CG H VA+S G ++ A+G +YG+LG G P+ + I
Sbjct: 4191 ACGLNHTVAVSTDGSMVWAFGDGDYGKLGLG-NSTAKSSPQKVDILCGI--------GIK 4241
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
+V+CG S A++++G VYT+G + L ++ ++ P++V L G+FI+D+A G
Sbjct: 4242 KVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNR---PQQVPVLSGVFIEDIAVG 4298
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLG 318
H+ AL+S G +YAWG + GQLGLG
Sbjct: 4299 AEHTLALSSTGDVYAWGSNSEGQLGLG 4325
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 173/382 (45%), Gaps = 79/382 (20%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI--- 139
++ WGA GQL E GR V + + CG +CT I + +GT+
Sbjct: 3998 VYLWGAGRHGQLA---EAGRNVMVPVAAPSFSQAQQVVCGQNCTFVI----QANGTVLAC 4050
Query: 140 ---STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQV--SCGSV-HVVALSECGLLQAWGY 193
S RL GQ + L + ++ Q+ SCGS H +AL+E G + +WG
Sbjct: 4051 GEGSYGRL---GQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4107
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
+YG+LG G + + PR I EA + E++ Q+SCG HSA V+ +G+++T+G
Sbjct: 4108 GDYGKLGHG-NSDRQRRPRQI--------EALQGEEVVQMSCGFKHSAVVTADGKLFTFG 4158
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL-YAWGGSQA 312
G G+LG L + + LP RV AL+G I VACG H+ A+++ G++ +A+G
Sbjct: 4159 NGDYGRLG---LGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDY 4215
Query: 313 GQLGLGPQTRSFSLIPNESDTY--------------------------FRNIPILVVPNG 346
G+LGLG T S P + D F ++ +P G
Sbjct: 4216 GKLGLGNSTAKSS--PQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4273
Query: 347 ------------------VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYP 388
++ +A G HTL G ++ WG NS GQ + + P
Sbjct: 4274 RARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREP 4333
Query: 389 SPVDWCVGE-VRKLAAGGGHSA 409
+ + G+ +R+++AG HSA
Sbjct: 4334 TLITVLQGKNIRQISAGRCHSA 4355
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 180/405 (44%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ P+L P+ ++++ I G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQ------PKL--APSFSDAQ--TIEAGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA----HCTAAIAEPRENDGT 138
+ G +G+LG G + +K+ +K +S H A E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE------- 476
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG + +P+L G ++C VS G H A++E G L
Sbjct: 477 ---GEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGEL 532
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G P ++K ++ + +VSCG H+ A+S++G
Sbjct: 533 YTWGEGDFGRLGHG-DSNSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 581
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ + AL G+FI+ V G S ALTS G +Y
Sbjct: 582 TVWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVY 636
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V ++ G SH L D
Sbjct: 637 AWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-ISIGDSHCLALSHDNE 685
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVSIQQISAGTSHS 730
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 146/309 (47%), Gaps = 47/309 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V +DG
Sbjct: 4102 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTADGK 4153
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG++
Sbjct: 4154 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVS----TDGSM--- 4206
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNT------IIC-----QVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T + I+C +V+CG+ VAL++ G + +
Sbjct: 4207 -VWAFGDG---DYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTF 4262
Query: 192 GYNEYGQL--GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
G + L GR Q V+ G F+++ ++ G H+ A+S G+V
Sbjct: 4263 GQDRLIGLPEGRARNHNRPQQVPVLSGV--FIED---------IAVGAEHTLALSSTGDV 4311
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWG 308
Y WG S GQLG L + P + L G I+ ++ G HS A T+ A G
Sbjct: 4312 YAWGSNSEGQLG---LGHTNHVREPTLITVLQGKNIRQISAGRCHSAAWTAPPVPPRAPG 4368
Query: 309 GSQAGQLGL 317
S QLGL
Sbjct: 4369 VSVPLQLGL 4377
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P I I +V GS +AL+ G + AW
Sbjct: 583 -VWSFG---GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I +S G+ H A+S + EVY
Sbjct: 639 GCG--ACLGCGSSEATALRPKLIEELAA--------TRIVDISIGDSHCLALSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDG+ I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGVSIQQISAGTSHSLAWTA 735
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 99/231 (42%), Gaps = 29/231 (12%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +GQL G V+ A AP + QV CG+ + + NG V
Sbjct: 4001 WGAGRHGQLAEA-------GRNVMVPVA-----APSFSQAQQVVCGQNCTFVIQANGTVL 4048
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGALYAW 307
G GS G+LG + S D +L + AL G + + +CG HS ALT G +++W
Sbjct: 4049 ACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSW 4105
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G R R I L VQ+ +CG H+ V DG++
Sbjct: 4106 GDGDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTADGKLF 4155
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
+G YG+ ++ P V G ++ ++A G H+ ++ S+
Sbjct: 4156 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTDGSM 4206
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VSE EVY WG S QL G +E + + +A + + G + +++ G
Sbjct: 368 VSETCEVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ A G G+LGLG +L + + R+I + G HTL +
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RSIKKVSSSKG------SDGHTLAFTT 475
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+G + WG YG+ + S+ YP + + G+V ++AG HSA + +
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
>gi|432889733|ref|XP_004075335.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Oryzias
latipes]
Length = 527
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 142/307 (46%), Gaps = 45/307 (14%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V + +F G N G LG G + P ++ L + + S+S G IA D
Sbjct: 37 VTVNDEVFALGTNCSGCLGLGDLQSTIEPRRIDVLCGKKIVSLSYGTGPHVVIATA---D 93
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTI---ICQVSCGSVHVVALSECGL 187
G + + WG N G+ L + N + + +V+CGS H +AL+ G
Sbjct: 94 GEV-----FAWGHNGYSQLGNGTTNHGLTPALVSTNLLGKRVTEVACGSHHTIALTADGE 148
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWGYN GQ+G G T RV + + + V CG+ S AV +NG
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPTPRRV--------SSCLQSKVVVNVGCGQLCSMAVLDNG 200
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
E+Y WG GQLG L + + P R+ AL G+ + VACG H+ ALT +G +YAW
Sbjct: 201 EIYGWGYNCNGQLG---LGNNGNQQTPCRIAALQGVNVVQVACGYAHTLALTDEGFVYAW 257
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG---VQLVACGHSHT-LVYMRD 363
G + GQLG G N+S+ + +P L+ + V++ AC SHT +
Sbjct: 258 GANSYGQLGTG----------NKSN---QALPTLINTDKERMVEVAACHTSHTSAAKTQS 304
Query: 364 GRIHGWG 370
G++ WG
Sbjct: 305 GQVLMWG 311
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 116/251 (46%), Gaps = 47/251 (18%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A ++ WG+N Q G G P + L G R ++ACG HT A+
Sbjct: 92 ADGEVFAWGHNGYSQLG-NGTTNHGLTPALVSTNLLG------KRVTEVACGSHHTIALT 144
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDG 137
+DG +F WG N GQ+G G+ + P +V LQS+ V ++ CG C+ A+ + E
Sbjct: 145 ADGEVFAWGYNNSGQVGSGSTANQPTPRRVSSCLQSKVVVNVGCGQLCSMAVLDNGE--- 201
Query: 138 TISTSRLWVWGQN------QGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSE 184
++ WG N G+N + TP I + QV+CG H +AL++
Sbjct: 202 ------IYGWGYNCNGQLGLGNNGNQQ-----TPCRIAALQGVNVVQVACGYAHTLALTD 250
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAA 242
G + AWG N YGQLG G P +I + E++ +V +C H SAA
Sbjct: 251 EGFVYAWGANSYGQLGTG-NKSNQALPTLIN---------TDKERMVEVAACHTSHTSAA 300
Query: 243 VSENGEVYTWG 253
+++G+V WG
Sbjct: 301 KTQSGQVLMWG 311
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 118/287 (41%), Gaps = 49/287 (17%)
Query: 63 RWLDIACGHE----------HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK-QL 111
R +D+ CG + H +DG +F WG N + QLG+GT P V L
Sbjct: 66 RRIDVLCGKKIVSLSYGTGPHVVIATADGEVFAWGHNGYSQLGNGTTNHGLTPALVSTNL 125
Query: 112 QSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWG 161
+ V ++CG+H T A+ E ++ WG N PR
Sbjct: 126 LGKRVTEVACGSHHTIALTADGE---------VFAWGYNNSGQVGSGSTANQPTPRRVSS 176
Query: 162 AFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFL 221
++ V CG + +A+ + G + WGYN GQLG G R+
Sbjct: 177 CLQSKVVV-NVGCGQLCSMAVLDNGEIYGWGYNCNGQLGLGNNGNQQTPCRI-------- 227
Query: 222 DEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVA 279
A + + QV+CG H+ A+++ G VY WG S GQLG +G+K + LP +
Sbjct: 228 -AALQGVNVVQVACGYAHTLALTDEGFVYAWGANSYGQLG-----TGNKSNQALPTLINT 281
Query: 280 LDGIFIKDVACGGVH-SCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
++ AC H S A T G + WG + GQ P FS
Sbjct: 282 DKERMVEVAACHTSHTSAAKTQSGQVLMWGQCR-GQAVSSPHLTHFS 327
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 84/198 (42%), Gaps = 27/198 (13%)
Query: 225 PELEKITQVSCGEYHSAA-----VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA 279
PE ++ + +C + SAA V+ N EV+ G G LG LQS + PRR+
Sbjct: 15 PEELRLIRQAC-VFGSAANEALYVTVNDEVFALGTNCSGCLGLGDLQS---TIEPRRIDV 70
Query: 280 LDGIFIKDVACG-GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
L G I ++ G G H T+ G ++AWG + QLG G +
Sbjct: 71 LCGKKIVSLSYGTGPHVVIATADGEVFAWGHNGYSQLGNGTTNHGLT------------- 117
Query: 339 PILVVPN----GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWC 394
P LV N V VACG HT+ DG + WGYN+ GQ + + P V C
Sbjct: 118 PALVSTNLLGKRVTEVACGSHHTIALTADGEVFAWGYNNSGQVGSGSTANQPTPRRVSSC 177
Query: 395 VGEVRKLAAGGGHSAVLA 412
+ + G G +A
Sbjct: 178 LQSKVVVNVGCGQLCSMA 195
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 70/151 (46%), Gaps = 20/151 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
IY WGYN +GQ G Q Q P + G N + +ACG+ HT A+ +G
Sbjct: 202 IYGWGYNCNGQLGLGNNGNQ-----QTPCRI-AALQGVNV--VQVACGYAHTLALTDEGF 253
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
++ WGAN +GQLG G + + P + + V+ +C +H +AA + +
Sbjct: 254 VYAWGANSYGQLGTGNKSNQALPTLINTDKERMVEVAACHTSHTSAAKTQ---------S 304
Query: 142 SRLWVWGQ--NQGSNFPRLFWGAFTPNTIIC 170
++ +WGQ Q + P L + T + C
Sbjct: 305 GQVLMWGQCRGQAVSSPHLTHFSSTDDVFAC 335
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 16/134 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A ++ WGYN+SGQ G Q P+++ L + +++ CG + A
Sbjct: 143 LTADGEVFAWGYNNSGQVGSGSTANQ-PTPRRVSSCL------QSKVVVNVGCGQLCSMA 195
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V +G ++ WG N GQLG G ++ P ++ LQ V ++CG T A+ +
Sbjct: 196 VLDNGEIYGWGYNCNGQLGLGNNGNQQTPCRIAALQGVNVVQVACGYAHTLALTDE---- 251
Query: 137 GTISTSRLWVWGQN 150
++ WG N
Sbjct: 252 -----GFVYAWGAN 260
>gi|60360320|dbj|BAD90404.1| mKIAA0393 protein [Mus musculus]
Length = 1871
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 104 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 155
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 156 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 208
Query: 143 RLWVWGQNQGSNFPRLFWGAF----TPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 209 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 265
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV+++G+VY
Sbjct: 266 GKGDYFRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDSGQVYA 316
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 317 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 362
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 43 VTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQIT-----ALSSYVVKKVAVHSGGRHATA 97
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+
Sbjct: 98 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------ 151
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 152 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 205
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 206 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 256
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH S K P+ V L G I VA G +H A+T G
Sbjct: 257 TKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDSGQ 313
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 314 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 360
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 160/366 (43%), Gaps = 59/366 (16%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSI---S 120
+ +A G + AV +G +++ G G+LG G G P ++ L S VK + S
Sbjct: 31 VQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHS 90
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIIC 170
G H TA + +++ WG+ PRL T I
Sbjct: 91 GGRHATALTVD----------GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IR 138
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP--RVIKGYAKFLDEAPELE 228
++CGS H AL+ G L WG EYG+LG G L+ +V+ G+
Sbjct: 139 DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH----------- 187
Query: 229 KITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
++ QV+CG + + A+++ G V++WG G G+LG + + +P+ + L+G +
Sbjct: 188 RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVC 244
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
+ CG S ALT G ++ WG +LG G SD + R ++ G
Sbjct: 245 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRG 292
Query: 347 VQLV--ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAA 403
++V A G H L G+++ WG N +GQ N +T P+ V G+ + ++A
Sbjct: 293 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVAC 352
Query: 404 GGGHSA 409
G HS
Sbjct: 353 GSSHSV 358
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 147/333 (44%), Gaps = 50/333 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ ++ +Y WG G+ G R R P + G +D+A G H+A
Sbjct: 1091 LSSEGEVYSWGEAKDGKLGHGNRSPCDR------PRVIESLRGIEV--VDVAAGGAHSAC 1142
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V + G L+TWG +G+LG E + P+ V+ LQ V I+CG+ + +D
Sbjct: 1143 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLC--LTDD 1200
Query: 137 GTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
T+ W WG R G P I + +V CGS VAL++ G +
Sbjct: 1201 DTV-----WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 1255
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG +Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GE
Sbjct: 1256 YTWGKGDYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGE 1306
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
VYTWG GQLG + + + PR V AL G + VACG H+ AW
Sbjct: 1307 VYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAWS 1354
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL 341
S+ G P + +P E + + + IPI+
Sbjct: 1355 TSKPASAGKLP-----AQVPMEYN-HLQEIPII 1381
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 174/411 (42%), Gaps = 76/411 (18%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P C A A R + + G + AV +DG
Sbjct: 991 IYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALATLRPVQLIGGEQTLFAVTADG 1041
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI---SCGAHCTAAIAEPRENDGT 138
L+ G G+LG G E P ++ +Q F+K + S G HC A +E
Sbjct: 1042 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE------- 1094
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG+ + PR+ + V+ G H ++ G L
Sbjct: 1095 ---GEVYSWGEAKDGKLGHGNRSPCDRPRVIES--LRGIEVVDVAAGGAHSACVTAAGDL 1149
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSEN 246
WG YG+LG + + L+ P+++ EA + ++ ++C G+ + ++++
Sbjct: 1150 YTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVIDIACGSGDAQTLCLTDD 1200
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 1201 DTVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 1257
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTL 358
WG +LG G SD + R P VQ +A G H +
Sbjct: 1258 WGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCV 1299
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
DG ++ WG N GQ + + P V G +V ++A G H+
Sbjct: 1300 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 1350
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 134/310 (43%), Gaps = 53/310 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHC 125
+ G +H A++S+G +++WG + G+LG G P ++ L+ E V + GAH
Sbjct: 1081 VNSGGKHCLALSSEGEVYSWGEAKDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 1140
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCG 175
A L+ WG+ + P+L A + +I ++CG
Sbjct: 1141 ACVTA----------AGDLYTWGKGRYGRLGHSDSEDQLKPKLV-EALQGHRVI-DIACG 1188
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + L++ + +WG +YG+LGRG +G + P I + +V
Sbjct: 1189 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVKV 1239
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G VYTWG G +LGH S D PR+V L G + +A G +
Sbjct: 1240 ECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSL 1296
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLV 350
H T G +Y WG + GQLG G T P LV V V
Sbjct: 1297 HCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRV 1343
Query: 351 ACGHSHTLVY 360
ACG +HTL +
Sbjct: 1344 ACGSAHTLAW 1353
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 108/210 (51%), Gaps = 21/210 (10%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ QV+ GS + A++ G + + G G+LG G++ + PR I + ++
Sbjct: 30 VVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYV------V 83
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
K V G H+ A++ +G+V++WG G G+LGH S + DK PR + AL I+D+
Sbjct: 84 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDI 140
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
ACG HS ALTS G LY WG + G+LG G T L P + + +L+ +Q
Sbjct: 141 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT--QLKP-------KMVKVLLGHRVIQ 191
Query: 349 LVACG--HSHTLVYMRDGRIHGWGYNSYGQ 376
VACG + TL +G + WG +G+
Sbjct: 192 -VACGSRDAQTLALTDEGLVFSWGDGDFGK 220
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 110/281 (39%), Gaps = 69/281 (24%)
Query: 186 GLLQAWGYNEYGQLGRGI---------TCEGLQGPRVIK--------------------G 216
G + WG+N GQLG GI CE L R ++ G
Sbjct: 989 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 1047
Query: 217 Y----------AKFLDEAPELEKITQ-------VSCGEYHSAAVSENGEVYTWGLGSVGQ 259
Y + + LE I V+ G H A+S GEVY+WG G+
Sbjct: 1048 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAKDGK 1107
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LGH + D+ PR + +L GI + DVA GG HS +T+ G LY WG + G+LG
Sbjct: 1108 LGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG--- 1161
Query: 320 QTRSFSLIPNESDTYFRNIPILVVP---NGVQLVAC--GHSHTLVYMRDGRIHGWGYNSY 374
SD+ + P LV + V +AC G + TL D + WG Y
Sbjct: 1162 ----------HSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDY 1211
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADA 414
G+ S P +D G V K+ G S L +
Sbjct: 1212 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 1252
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 82/218 (37%), Gaps = 62/218 (28%)
Query: 246 NGEVYTWGLGSVGQLG--------------------HCSLQSGDKELL------------ 273
+G +Y WG GQLG L G++ L
Sbjct: 988 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 1047
Query: 274 -----------------PRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWGGSQAGQ 314
P + ++ +FIK VA GG H AL+S+G +Y+WG ++ G+
Sbjct: 1048 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAKDGK 1107
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LG G RS P ++ R I ++ VA G +H+ G ++ WG Y
Sbjct: 1108 LGHG--NRSPCDRPRVIES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRY 1157
Query: 375 GQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
G+ + S P V+ G V +A G G + L
Sbjct: 1158 GRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTL 1195
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 64/166 (38%), Gaps = 11/166 (6%)
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
GL QLG G K +P L + + VA G A+T +G +Y+ G +
Sbjct: 1 GLNDKDQLGGLK---GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATN 57
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYN 372
G+LGLG + + IP + + V V G H DG++ WG
Sbjct: 58 GRLGLGMSSGTVP-IPRQITALSSYVVKKVA------VHSGGRHATALTVDGKVFSWGEG 110
Query: 373 SYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLADACSL 417
G+ + P ++ +R +A G HSA L + L
Sbjct: 111 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 156
>gi|440898467|gb|ELR49962.1| RCC1 and BTB domain-containing protein 1 [Bos grunniens mutus]
Length = 531
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 141/305 (46%), Gaps = 41/305 (13%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V +F +G N LG G P+K++ L + +KS+S G+ ++ D
Sbjct: 37 VTDSDEVFVFGLNYSSCLGTGDNHSTLVPKKLEALCGKKIKSLSYGSGPHVLLST---ED 93
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQV---SCGSVHVVALSECGL 187
G + + WG N G+ L N +I QV +CGS H +AL+ G
Sbjct: 94 GVV-----YAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGE 148
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWGYN GQ+G G T PR + ++++ ++CG+ S AV +NG
Sbjct: 149 VFAWGYNNCGQVGSGSTANQ-PTPRKVT-------NCLHIKRVVGIACGQTSSMAVLDNG 200
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
EVY WG GQLG L + +L P RV AL + + + CG H+ ALT +G LYAW
Sbjct: 201 EVYGWGYNGNGQLG---LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAW 257
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV-QLVACGHSHT-LVYMRDGR 365
G + GQLG G + S P I+V V ++ AC +HT + G
Sbjct: 258 GANTYGQLGTGNKNNLLS--PAH---------IMVEKERVIEIAACHSAHTSAAKTQGGH 306
Query: 366 IHGWG 370
++ WG
Sbjct: 307 VYMWG 311
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 114/238 (47%), Gaps = 34/238 (14%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HV+ +E G++ AWG+N Y QLG G T +GL +V ++++ +V+CG
Sbjct: 86 HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLL--------IKQVVEVACGS 137
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV---ACGGVH 294
+HS A++ +GEV+ WG + GQ+G S + + PR+V + + IK V ACG
Sbjct: 138 HHSMALAADGEVFAWGYNNCGQVGSGSTAN---QPTPRKVT--NCLHIKRVVGIACGQTS 192
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG---VQLVA 351
S A+ G +Y WG + GQLGLG + P+ V V +
Sbjct: 193 SMAVLDNGEVYGWGYNGNGQLGLGNNGNQLT-------------PVRVAALHSVCVNQIV 239
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
CG++HTL +G ++ WG N+YGQ SP V + R + HSA
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLL--SPAHIMVEKERVIEIAACHSA 295
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 115/453 (25%), Positives = 177/453 (39%), Gaps = 71/453 (15%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG+N Q G G Q P Q+ C + +++ACG H+ A+A+DG
Sbjct: 95 VVYAWGHNGYSQLGN-GTTNQGLAPIQV------CTNLLIKQVVEVACGSHHSMALAADG 147
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+F WG N GQ+G G+ + P KV L + V I+CG + A+ + E G
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYG--- 204
Query: 141 TSRLWVWGQN------QGSNFPRLFWGAFTPNTIIC--QVSCGSVHVVALSECGLLQAWG 192
WG N G+N +L +C Q+ CG H +AL++ GLL AWG
Sbjct: 205 ------WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G L ++ E E++ ++ +C H SAA ++ G VY
Sbjct: 259 ANTYGQLGTGNKNNLLSPAHIM----------VEKERVIEIAACHSAHTSAAKTQGGHVY 308
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPR--RVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
W G C G LP + + D +F +C T
Sbjct: 309 MW--------GQC---RGQSVTLPHLTHLSSTDDVF----------ACFATPAVTWRLLS 347
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFR-NIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
L + + P +D FR + + V V + C H ++
Sbjct: 348 VEHEDFLTVAESLKKEFDSPETADLKFRIDGKYIHVHKAVLKIRCEHFRSMFQSY----- 402
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL----AAGGGHSAVLADACSLKELCEF 423
W + E+ +YA Y + + + + L A G A LK+LC+
Sbjct: 403 -WNEDMKEVIEIEQFSYAVYRAFLQYLYTDAVDLPPEDAIGLLDLATSYCENRLKKLCQH 461
Query: 424 RLAESVTLSNASEIEDVASRTGSEALARLCERL 456
+ +T+ NA + A R +E L C +
Sbjct: 462 IIKRGITVENAFSLFSAAVRYDAEDLEEFCFKF 494
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 83/173 (47%), Gaps = 17/173 (9%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHSCALT 299
V+++ EV+ +GL LG +GD L+P+++ AL G IK ++ G G H T
Sbjct: 37 VTDSDEVFVFGLNYSSCLG-----TGDNHSTLVPKKLEALCGKKIKSLSYGSGPHVLLST 91
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
G +YAWG + QLG G + + I ++ L++ V+ VACG H++
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTN--------LLIKQVVE-VACGSHHSMA 142
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
DG + WGYN+ GQ + + P V C+ R + G ++ +A
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMA 195
>gi|300794911|ref|NP_001178141.1| RCC1 and BTB domain-containing protein 1 [Bos taurus]
gi|296481892|tpg|DAA24007.1| TPA: regulator of chromosome condensation (RCC1) and BTB (POZ)
domain containing protein 1 [Bos taurus]
Length = 531
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 141/305 (46%), Gaps = 41/305 (13%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V +F +G N LG G P+K++ L + +KS+S G+ ++ D
Sbjct: 37 VTDSDEVFVFGLNYSSCLGTGDNHSTLVPKKLEALCGKKIKSLSYGSGPHVLLST---ED 93
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQV---SCGSVHVVALSECGL 187
G + + WG N G+ L N +I QV +CGS H +AL+ G
Sbjct: 94 GVV-----YAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGE 148
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWGYN GQ+G G T PR + ++++ ++CG+ S AV +NG
Sbjct: 149 VFAWGYNNCGQVGSGSTANQ-PTPRKVT-------NCLHIKRVVGIACGQTSSMAVLDNG 200
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
EVY WG GQLG L + +L P RV AL + + + CG H+ ALT +G LYAW
Sbjct: 201 EVYGWGYNGNGQLG---LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAW 257
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV-QLVACGHSHT-LVYMRDGR 365
G + GQLG G + S P I+V V ++ AC +HT + G
Sbjct: 258 GANTYGQLGTGNKNNLLS--PAH---------IMVEKERVIEIAACHSAHTSAAKTQGGH 306
Query: 366 IHGWG 370
++ WG
Sbjct: 307 VYMWG 311
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 114/238 (47%), Gaps = 34/238 (14%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HV+ +E G++ AWG+N Y QLG G T +GL +V ++++ +V+CG
Sbjct: 86 HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLL--------IKQVVEVACGS 137
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV---ACGGVH 294
+HS A++ +GEV+ WG + GQ+G S + + PR+V + + IK V ACG
Sbjct: 138 HHSMALAADGEVFAWGYNNCGQVGSGSTAN---QPTPRKVT--NCLHIKRVVGIACGQTS 192
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG---VQLVA 351
S A+ G +Y WG + GQLGLG + P+ V V +
Sbjct: 193 SMAVLDNGEVYGWGYNGNGQLGLGNNGNQLT-------------PVRVAALHSVCVNQIV 239
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
CG++HTL +G ++ WG N+YGQ SP V + R + HSA
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLL--SPAHIMVEKERVIEIAACHSA 295
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 114/453 (25%), Positives = 177/453 (39%), Gaps = 71/453 (15%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG+N Q G G Q P Q+ C + +++ACG H+ A+A+DG
Sbjct: 95 VVYAWGHNGYSQLGN-GTTNQGLAPIQV------CTNLLIKQVVEVACGSHHSMALAADG 147
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+F WG N GQ+G G+ + P KV L + V I+CG + A+ + E G
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYG--- 204
Query: 141 TSRLWVWGQN------QGSNFPRLFWGAFTPNTIIC--QVSCGSVHVVALSECGLLQAWG 192
WG N G+N +L +C Q+ CG H +AL++ GLL AWG
Sbjct: 205 ------WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G L ++ E E++ ++ +C H SAA ++ G VY
Sbjct: 259 ANTYGQLGTGNKNNLLSPAHIM----------VEKERVIEIAACHSAHTSAAKTQGGHVY 308
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPR--RVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
W G C G LP + + D +F +C T
Sbjct: 309 MW--------GQC---RGQSVTLPHLTHLSSTDDVF----------ACFATPAVTWRLLS 347
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFR-NIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
L + + P +D FR + + V V + C H ++
Sbjct: 348 VEHEDFLTVAESLKKEFDSPETADLKFRIDGKYIHVHKAVLKIRCEHFRSMFQSY----- 402
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL----AAGGGHSAVLADACSLKELCEF 423
W + ++ +YA Y + + + + L A G A LK+LC+
Sbjct: 403 -WNEDMKEVIEIDQFSYAVYRAFLQYLYTDAVDLPPEDAIGLLDLATSYCENRLKKLCQH 461
Query: 424 RLAESVTLSNASEIEDVASRTGSEALARLCERL 456
+ +T+ NA + A R +E L C +
Sbjct: 462 IIKRGITVENAFSLFSAAVRYDAEDLEEFCFKF 494
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 132/317 (41%), Gaps = 45/317 (14%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G +A + ++V+G N+S G G +PK+L G + L
Sbjct: 26 VFGTSANEALYVTDSDEVFVFGLNYSSCLG-TGDNHSTLVPKKLEA-----LCGKKIKSL 79
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV-KQLQSEFVKSISCGAH 124
G H DG ++ WG N + QLG+GT P +V L + V ++CG+H
Sbjct: 80 SYGSG-PHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSH 138
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQ------GSN----FPRLFWGAFTPNTIICQVSC 174
+ A+A E ++ WG N GS PR ++ ++C
Sbjct: 139 HSMALAADGE---------VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVV-GIAC 188
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G +A+ + G + WGYN GQLG G L RV A + Q+
Sbjct: 189 GQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRV---------AALHSVCVNQIV 239
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGG 292
CG H+ A+++ G +Y WG + GQLG +G+K L P ++ I+ AC
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLG-----TGNKNNLLSPAHIMVEKERVIEIAACHS 294
Query: 293 VH-SCALTSKGALYAWG 308
H S A T G +Y WG
Sbjct: 295 AHTSAAKTQGGHVYMWG 311
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 83/173 (47%), Gaps = 17/173 (9%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHSCALT 299
V+++ EV+ +GL LG +GD L+P+++ AL G IK ++ G G H T
Sbjct: 37 VTDSDEVFVFGLNYSSCLG-----TGDNHSTLVPKKLEALCGKKIKSLSYGSGPHVLLST 91
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
G +YAWG + QLG G + + I ++ L++ V+ VACG H++
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTN--------LLIKQVVE-VACGSHHSMA 142
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
DG + WGYN+ GQ + + P V C+ R + G ++ +A
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMA 195
>gi|195999218|ref|XP_002109477.1| hypothetical protein TRIADDRAFT_21647 [Trichoplax adhaerens]
gi|190587601|gb|EDV27643.1| hypothetical protein TRIADDRAFT_21647, partial [Trichoplax
adhaerens]
Length = 330
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 106/346 (30%), Positives = 146/346 (42%), Gaps = 48/346 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACG-HEHTAAVASDG 81
+Y WG SG G G + IP P + N + L ACG H A A DG
Sbjct: 1 VYTWG---SGINGALGHGEDIDIPS---PRVVEALLAYNIKRL--ACGLHTVFALNAEDG 52
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+++WG ++G LG G R P K+ +S V ISC AA+ +T
Sbjct: 53 KVYSWGLGKYGILGQGNLRSRFAPLKIASFKSSNVIDISCHELHAAAVTS------VTNT 106
Query: 142 SRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
++ +G N S P+L N I +V+CG H ALS G L W
Sbjct: 107 GSVYSFGDNSNSQLGVGDTEPYAEPQLVTVLNDENII--KVACGKYHSAALSAKGNLFLW 164
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + GQLG G + L + K+ V+CG+ H+ ++ G VY
Sbjct: 165 GLGDDGQLG--------LGNYNLSTEPTILHIGEKKAKVMDVACGDLHTCILTVGGLVYA 216
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
+G GQ+ S+ +K LP R+ V+CG HS A+T G LYAWG
Sbjct: 217 FGSNIYGQIAAPSM---NKFHLPYRISFNTSKRFVSVSCGSFHSAAITENGKLYAWGLET 273
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT 357
G+LGLG + S P E + FR+ I +ACG HT
Sbjct: 274 DGRLGLGDCKQRSS--PTEVEG-FRDKKI-------GRIACGSKHT 309
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 161/338 (47%), Gaps = 35/338 (10%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST- 141
++TWG+ G LG G + P V+ L + +K ++CG H A+ DG + +
Sbjct: 1 VYTWGSGINGALGHGEDIDIPSPRVVEALLAYNIKRLACGLHTVFAL---NAEDGKVYSW 57
Query: 142 --SRLWVWGQ-NQGSNFPRLFWGAFTPNTIICQVSCGSVH---VVALSECGLLQAWGYNE 195
+ + GQ N S F L +F + +I +SC +H V +++ G + ++G N
Sbjct: 58 GLGKYGILGQGNLRSRFAPLKIASFKSSNVI-DISCHELHAAAVTSVTNTGSVYSFGDNS 116
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
QLG G T E P+++ L++ E I +V+CG+YHSAA+S G ++ WGLG
Sbjct: 117 NSQLGVGDT-EPYAEPQLVT----VLND----ENIIKVACGKYHSAALSAKGNLFLWGLG 167
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
GQLG + + + + + DVACG +H+C LT G +YA+G + GQ+
Sbjct: 168 DDGQLGLGNYNLSTEPTILH--IGEKKAKVMDVACGDLHTCILTVGGLVYAFGSNIYGQI 225
Query: 316 GLGPQTRSFSLIPNES-DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
P F L S +T R + V+CG H+ +G+++ WG +
Sbjct: 226 A-APSMNKFHLPYRISFNTSKRFVS----------VSCGSFHSAAITENGKLYAWGLETD 274
Query: 375 GQAANEKSTYAWYPSPVD-WCVGEVRKLAAGGGHSAVL 411
G+ P+ V+ + ++ ++A G H+A L
Sbjct: 275 GRLGLGDCKQRSSPTEVEGFRDKKIGRIACGSKHTAAL 312
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 104/237 (43%), Gaps = 25/237 (10%)
Query: 11 ARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACG 70
A V ++ ++Y +G N + Q G E P+L N + +ACG
Sbjct: 97 AAAVTSVTNTGSVYSFGDNSNSQLGVGDTEPYAE------PQLVTVLNDEN--IIKVACG 148
Query: 71 HEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF-VKSISCGAHCTAAI 129
H+AA+++ G LF WG + GQLG G P + + + V ++CG T +
Sbjct: 149 KYHSAALSAKGNLFLWGLGDDGQLGLGNYNLSTEPTILHIGEKKAKVMDVACGDLHTCIL 208
Query: 130 AEPRENDGTISTSRLWVWGQNQGSNFPRL---FWGAFTPNTIICQVSCGSVHVVALSECG 186
G + ++GQ + + + +F + VSCGS H A++E G
Sbjct: 209 TV----GGLVYAFGSNIYGQIAAPSMNKFHLPYRISFNTSKRFVSVSCGSFHSAAITENG 264
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
L AWG G+LG G C+ P ++G+ +KI +++CG H+AA+
Sbjct: 265 KLYAWGLETDGRLGLG-DCKQRSSPTEVEGFRD--------KKIGRIACGSKHTAAL 312
>gi|23271234|gb|AAH38104.1| RCBTB1 protein [Homo sapiens]
Length = 355
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 141/304 (46%), Gaps = 39/304 (12%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V + +F +G N LG G + P+K++ L + +KS+S G+ ++ D
Sbjct: 37 VTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLST---ED 93
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQV---SCGSVHVVALSECGL 187
G + + WG N G+ + N +I QV +CGS H +AL+ G
Sbjct: 94 GVV-----YAWGHNGYSQLGNGTTNQGIATVQVCTNLLIKQVVEVACGSHHSMALAADGE 148
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWGYN GQ+G G T PR + ++++ ++CG+ S AV +NG
Sbjct: 149 VFAWGYNNCGQVGSGSTANQ-PTPRKVT-------NCLHIKRVVGIACGQTSSMAVLDNG 200
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
EVY WG GQLG L + +L P RV AL + + + CG H+ ALT +G LYAW
Sbjct: 201 EVYGWGYNGNGQLG---LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAW 257
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRI 366
G + GQLG G + S P + V++ AC +HT + G +
Sbjct: 258 GANTYGQLGTGNKNNLLS--PAHIMVEKERV--------VEIAACHSAHTSAAKTQGGHV 307
Query: 367 HGWG 370
+ WG
Sbjct: 308 YMWG 311
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 117/233 (50%), Gaps = 29/233 (12%)
Query: 148 GQNQGSNFPRLFWGAFTPNTIICQVSCGS-VHVVALSECGLLQAWGYNEYGQLGRGITCE 206
G NQ + P+ G I +S GS HV+ +E G++ AWG+N Y QLG G T +
Sbjct: 57 GDNQSTLVPKKLEGLCGKK--IKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQ 114
Query: 207 GLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQ 266
G+ +V ++++ +V+CG +HS A++ +GEV+ WG + GQ+G S
Sbjct: 115 GIATVQVCTNLL--------IKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTA 166
Query: 267 SGDKELLPRRVVALDGIFIKDV---ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRS 323
+ + PR+V + + IK V ACG S A+ G +Y WG + GQLGLG
Sbjct: 167 N---QPTPRKVT--NCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ 221
Query: 324 FSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
T R + V V + CG++HTL +G ++ WG N+YGQ
Sbjct: 222 L--------TPVRVAALHSVC--VNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 111/243 (45%), Gaps = 37/243 (15%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG+N Q G G Q Q+ L + +++ACG H+ A+A+DG
Sbjct: 95 VVYAWGHNGYSQLGN-GTTNQGIATVQVCTNLL------IKQVVEVACGSHHSMALAADG 147
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+F WG N GQ+G G+ + P KV L + V I+CG + A+ + E G
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYG--- 204
Query: 141 TSRLWVWGQN------QGSNFPRLFWGAFTPNTIIC--QVSCGSVHVVALSECGLLQAWG 192
WG N G+N +L +C Q+ CG H +AL++ GLL AWG
Sbjct: 205 ------WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G L ++ E E++ ++ +C H SAA ++ G VY
Sbjct: 259 ANTYGQLGTGNKNNLLSPAHIM----------VEKERVVEIAACHSAHTSAAKTQGGHVY 308
Query: 251 TWG 253
WG
Sbjct: 309 MWG 311
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 140/334 (41%), Gaps = 46/334 (13%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G +A + ++V+G N+S G G + +PK+L G + L
Sbjct: 26 VFGTSASEALYVTDNDEVFVFGLNYSNCLG-TGDNQSTLVPKKLEG-----LCGKKIKSL 79
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDG-TEEGRKHPEKVKQLQSEFVKSISCGAH 124
G H DG ++ WG N + QLG+G T +G + L + V ++CG+H
Sbjct: 80 SYGSG-PHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIATVQVCTNLLIKQVVEVACGSH 138
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQ------GSN----FPRLFWGAFTPNTIICQVSC 174
+ A+A E ++ WG N GS PR ++ ++C
Sbjct: 139 HSMALAADGE---------VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVV-GIAC 188
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G +A+ + G + WGYN GQLG G L RV A + Q+
Sbjct: 189 GQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRV---------AALHSVCVNQIV 239
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGG 292
CG H+ A+++ G +Y WG + GQLG +G+K L P ++ ++ AC
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLG-----TGNKNNLLSPAHIMVEKERVVEIAACHS 294
Query: 293 VH-SCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
H S A T G +Y WG + GQ + P FS
Sbjct: 295 AHTSAAKTQGGHVYMWGQCR-GQSVILPHLTHFS 327
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 17/194 (8%)
Query: 222 DEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVA 279
E + K+ + V++N EV+ +GL LG +GD + L+P+++
Sbjct: 16 QEIASIRKVCVFGTSASEALYVTDNDEVFVFGLNYSNCLG-----TGDNQSTLVPKKLEG 70
Query: 280 LDGIFIKDVACG-GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
L G IK ++ G G H T G +YAWG + QLG G + + + ++ +
Sbjct: 71 LCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIATVQVCTNLLIKQ- 129
Query: 339 PILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEV 398
V VACG H++ DG + WGYN+ GQ + + P V C+
Sbjct: 130 --------VVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181
Query: 399 RKLAAGGGHSAVLA 412
R + G ++ +A
Sbjct: 182 RVVGIACGQTSSMA 195
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 20/151 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WGYN +GQ G QL P ++ C I CG+ HT A+ +G
Sbjct: 202 VYGWGYNGNGQLGLGNNGNQLT-PVRVAALHSVCVN-------QIVCGYAHTLALTDEGL 253
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
L+ WGAN +GQLG G + P + + V+ +C AH +AA +
Sbjct: 254 LYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQG--------- 304
Query: 142 SRLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 305 GHVYMWGQCRGQSVILPHLTHFSCTDDVFAC 335
>gi|297694075|ref|XP_002824322.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Pongo abelii]
gi|332241941|ref|XP_003270143.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Nomascus
leucogenys]
Length = 531
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 141/304 (46%), Gaps = 39/304 (12%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V + +F +G N LG G + P+K++ L + +KS+S G+ ++ D
Sbjct: 37 VTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLST---ED 93
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQV---SCGSVHVVALSECGL 187
G + + WG N G+ + N +I QV +CGS H +AL+ G
Sbjct: 94 GVV-----YAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGE 148
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWGYN GQ+G G T PR + ++++ ++CG+ S AV +NG
Sbjct: 149 VFAWGYNNCGQVGSGSTANQ-PTPRKVT-------NCLHIKRVVGIACGQTSSMAVLDNG 200
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
EVY WG GQLG L + +L P RV AL + + + CG H+ ALT +G LYAW
Sbjct: 201 EVYGWGYNGNGQLG---LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAW 257
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRI 366
G + GQLG G + S P + V++ AC +HT + G +
Sbjct: 258 GANTYGQLGTGNKNNLLS--PAHIMVEKERV--------VEIAACHSAHTSAAKTQGGHV 307
Query: 367 HGWG 370
+ WG
Sbjct: 308 YMWG 311
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 126/269 (46%), Gaps = 37/269 (13%)
Query: 148 GQNQGSNFPRLFWGAFTPNTIICQVSCGS-VHVVALSECGLLQAWGYNEYGQLGRGITCE 206
G NQ + P+ G I +S GS HV+ +E G++ AWG+N Y QLG G T +
Sbjct: 57 GDNQSTLVPKKLEGLCGKK--IKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQ 114
Query: 207 GLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQ 266
G+ +V ++++ +V+CG +HS A++ +GEV+ WG + GQ+G S
Sbjct: 115 GIAPIQVCTNLL--------IKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTA 166
Query: 267 SGDKELLPRRVVALDGIFIKDV---ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRS 323
+ + PR+V + + IK V ACG S A+ G +Y WG + GQLGLG
Sbjct: 167 N---QPTPRKVT--NCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ 221
Query: 324 FSLIPNESDTYFRNIPILVVPNG---VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANE 380
+ P+ V V + CG++HTL +G ++ WG N+YGQ
Sbjct: 222 LT-------------PVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268
Query: 381 KSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
SP V + R + HSA
Sbjct: 269 NKNNLL--SPAHIMVEKERVVEIAACHSA 295
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 113/452 (25%), Positives = 177/452 (39%), Gaps = 69/452 (15%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG+N Q G G Q P Q+ C + +++ACG H+ A+A+DG
Sbjct: 95 VVYAWGHNGYSQLGN-GTTNQGIAPIQV------CTNLLIKQVVEVACGSHHSMALAADG 147
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+F WG N GQ+G G+ + P KV L + V I+CG + A+ + E G
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYG--- 204
Query: 141 TSRLWVWGQN------QGSNFPRLFWGAFTPNTIIC--QVSCGSVHVVALSECGLLQAWG 192
WG N G+N +L +C Q+ CG H +AL++ GLL AWG
Sbjct: 205 ------WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G L ++ E E++ ++ +C H SAA ++ G VY
Sbjct: 259 ANTYGQLGTGNKNNLLSPAHIM----------VEKERVVEIAACHSAHTSAAKTQGGHVY 308
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC-GGVHSCALTSKGALYAWGG 309
W G C G +LP + +C V +C T +
Sbjct: 309 MW--------GQC---RGQSVILPH---------LTHFSCTDDVFACFATPAVSWRLLSV 348
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFR-NIPILVVPNGVQLVACGHSHTLVYMRDGRIHG 368
L + + P +D FR + + V V + C H ++
Sbjct: 349 EHEDFLTVAESLKKEFDSPETADLKFRIDGKYIHVHKAVLKIRCEHFRSMFQSY------ 402
Query: 369 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL----AAGGGHSAVLADACSLKELCEFR 424
W + ++ +Y Y + + + + L A G A LK+LC+
Sbjct: 403 WNEDMKEVIEIDQFSYPVYRAFLQYLYTDTVDLPPEDAIGLLDLATSYCENRLKKLCQHI 462
Query: 425 LAESVTLSNASEIEDVASRTGSEALARLCERL 456
+ +T+ NA + A R +E L C +
Sbjct: 463 IKRGITVENAFSLFSAAVRYDAEDLEEFCFKF 494
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 140/334 (41%), Gaps = 46/334 (13%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G +A + ++V+G N+S G G + +PK+L G + L
Sbjct: 26 VFGTSASEALYVTDNDEVFVFGLNYSNCLG-TGDNQSTLVPKKLEG-----LCGKKIKSL 79
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV-KQLQSEFVKSISCGAH 124
G H DG ++ WG N + QLG+GT P +V L + V ++CG+H
Sbjct: 80 SYGSG-PHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSH 138
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQ------GSN----FPRLFWGAFTPNTIICQVSC 174
+ A+A E ++ WG N GS PR ++ ++C
Sbjct: 139 HSMALAADGE---------VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVV-GIAC 188
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G +A+ + G + WGYN GQLG G L RV A + Q+
Sbjct: 189 GQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRV---------AALHSVCVNQIV 239
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGG 292
CG H+ A+++ G +Y WG + GQLG +G+K L P ++ ++ AC
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLG-----TGNKNNLLSPAHIMVEKERVVEIAACHS 294
Query: 293 VH-SCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
H S A T G +Y WG + GQ + P FS
Sbjct: 295 AHTSAAKTQGGHVYMWGQCR-GQSVILPHLTHFS 327
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 83/173 (47%), Gaps = 17/173 (9%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHSCALT 299
V++N EV+ +GL LG +GD + L+P+++ L G IK ++ G G H T
Sbjct: 37 VTDNDEVFVFGLNYSNCLG-----TGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLST 91
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
G +YAWG + QLG G + + I ++ L++ V+ VACG H++
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTN--------LLIKQVVE-VACGSHHSMA 142
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
DG + WGYN+ GQ + + P V C+ R + G ++ +A
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMA 195
>gi|422294826|gb|EKU22126.1| hect domain and rld 4, partial [Nannochloropsis gaditana CCMP526]
Length = 516
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/318 (31%), Positives = 146/318 (45%), Gaps = 33/318 (10%)
Query: 106 EKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTP 165
E+ + V+ I+CGA T A+ S + WG G +P +
Sbjct: 118 ERYVAEEDGLVQDIACGATFTIALT---------SRGVPYQWGTVNGRAYPEPSRVSLGV 168
Query: 166 NTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAP 225
QVSCG H +AL E G + +WG +GQLG+G + PR+I LD P
Sbjct: 169 PLRCLQVSCGRKHALALMEGGFVTSWGVGYFGQLGQGDNLSSDR-PRLIH----HLDP-P 222
Query: 226 EL--EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
L +++ V+CG HSA + V+ +G GQ+G Q+ +K PR V + GI
Sbjct: 223 RLGGDRVVAVACGGQHSAVHTAGQSVFCFGFNRYGQVGQG--QACNKISTPR-PVNMSGI 279
Query: 284 ---FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI 340
I+ + CG H+ LT KG +++WG S G+LGL P + +P E FR P+
Sbjct: 280 GSSQIRQLVCGRHHTSVLTDKGQVFSWGASSFGRLGL-PDPKKIVGLPTEVPA-FRCCPL 337
Query: 341 LVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVR 399
+ ACG H L DGR + WGY S GQ + + P PV+ G +
Sbjct: 338 AAL-------ACGDFHVLGLGVDGRAYAWGYGSEGQGGLGATLHLRTPRPVEGLEGSRIA 390
Query: 400 KLAAGGGHSAVLADACSL 417
++A G S V+ +A L
Sbjct: 391 QIACGAWWSMVVTEAGRL 408
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 162/393 (41%), Gaps = 70/393 (17%)
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVK--SISCGA 123
DIACG T A+ S G + WG T GR +PE + ++ +SCG
Sbjct: 130 DIACGATFTIALTSRGVPYQWG----------TVNGRAYPEPSRVSLGVPLRCLQVSCGR 179
Query: 124 HCTAAIAEPRENDGTISTSRLWVWGQ-----NQGSNFPRLFWGAFTPNT---IICQVSCG 175
A+ E G +++ + +GQ N S+ PRL P + V+CG
Sbjct: 180 KHALALME----GGFVTSWGVGYFGQLGQGDNLSSDRPRLIHHLDPPRLGGDRVVAVACG 235
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
H + + +G+N YGQ+G+G C + PR + +I Q+ C
Sbjct: 236 GQHSAVHTAGQSVFCFGFNRYGQVGQGQACNKISTPRPVN------MSGIGSSQIRQLVC 289
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKEL-LPRRVVALDGIFIKDVACGGVH 294
G +H++ +++ G+V++WG S G+LG L K + LP V A + +ACG H
Sbjct: 290 GRHHTSVLTDKGQVFSWGASSFGRLG---LPDPKKIVGLPTEVPAFRCCPLAALACGDFH 346
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGH 354
L G YAWG GQ GLG + P E R + +ACG
Sbjct: 347 VLGLGVDGRAYAWGYGSEGQGGLGATLHLRTPRPVEGLEGSR----------IAQIACGA 396
Query: 355 SHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSP----------------VDWCVG-- 396
++V GR++ WGY G E+++ Y P + C+
Sbjct: 397 WWSMVVTEAGRLYTWGYGDGGWLGLERASKLPYVEPCPPVTKYGATCSFDSDFNACLPAV 456
Query: 397 -------EVRKLAAGGGHSAVLADACSLKELCE 422
V K+ AGGGH+ ++A + LC+
Sbjct: 457 VSTLSHLRVEKVVAGGGHTIIMARRIQ-RRLCK 488
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 121/277 (43%), Gaps = 24/277 (8%)
Query: 51 PELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQ 110
PE G R L ++CG +H A+ G + +WG FGQLG G P +
Sbjct: 159 PEPSRVSLGVPLRCLQVSCGRKHALALMEGGFVTSWGVGYFGQLGQGDNLSSDRPRLIHH 218
Query: 111 LQS-----EFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSN---FPRLFWGA 162
L + V +++CG +A+ ++ +R GQ Q N PR +
Sbjct: 219 LDPPRLGGDRVVAVACGGQ-HSAVHTAGQSVFCFGFNRYGQVGQGQACNKISTPRPVNMS 277
Query: 163 FTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLD 222
++ I Q+ CG H L++ G + +WG + +G+L GL P+ I G
Sbjct: 278 GIGSSQIRQLVCGRHHTSVLTDKGQVFSWGASSFGRL-------GLPDPKKIVGLPT--- 327
Query: 223 EAPELE--KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL 280
E P + ++CG++H + +G Y WG GS GQ G L + PR V L
Sbjct: 328 EVPAFRCCPLAALACGDFHVLGLGVDGRAYAWGYGSEGQGG---LGATLHLRTPRPVEGL 384
Query: 281 DGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
+G I +ACG S +T G LY WG G LGL
Sbjct: 385 EGSRIAQIACGAWWSMVVTEAGRLYTWGYGDGGWLGL 421
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 132/320 (41%), Gaps = 70/320 (21%)
Query: 23 IYVWGYNHSGQTGRK---GRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+ WG + GQ G+ +R I PP L G R + +ACG +H+A +
Sbjct: 191 VTSWGVGYFGQLGQGDNLSSDRPRLIHHLDPPRLGG------DRVVAVACGGQHSAVHTA 244
Query: 80 DGTLFTWGANEFGQLGDG---TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
++F +G N +GQ+G G + P + + S ++ + CG H T+ + +
Sbjct: 245 GQSVFCFGFNRYGQVGQGQACNKISTPRPVNMSGIGSSQIRQLVCGRHHTSVLTD----- 299
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTII--------------CQVSCGSVHVVAL 182
+++ WG S+F RL G P I+ ++CG HV+ L
Sbjct: 300 ----KGQVFSWG---ASSFGRL--GLPDPKKIVGLPTEVPAFRCCPLAALACGDFHVLGL 350
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
G AWGY GQ G G T L+ PR ++G E +I Q++CG + S
Sbjct: 351 GVDGRAYAWGYGSEGQGGLGATLH-LRTPRPVEGL--------EGSRIAQIACGAWWSMV 401
Query: 243 VSENGEVYTWGLGSVGQLG---------------------HCSLQSGDKELLPRRVVALD 281
V+E G +YTWG G G LG CS S LP V L
Sbjct: 402 VTEAGRLYTWGYGDGGWLGLERASKLPYVEPCPPVTKYGATCSFDSDFNACLPAVVSTLS 461
Query: 282 GIFIKDVACGGVHSCALTSK 301
+ ++ V GG H+ + +
Sbjct: 462 HLRVEKVVAGGGHTIIMARR 481
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 59/144 (40%), Gaps = 25/144 (17%)
Query: 273 LPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESD 332
L R V DG+ ++D+ACG + ALTS+G Y WG T + P S
Sbjct: 117 LERYVAEEDGL-VQDIACGATFTIALTSRGVPYQWG------------TVNGRAYPEPSR 163
Query: 333 TYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ------AANEKSTYAW 386
L VP V+CG H L M G + WG +GQ ++++
Sbjct: 164 VS------LGVPLRCLQVSCGRKHALALMEGGFVTSWGVGYFGQLGQGDNLSSDRPRLIH 217
Query: 387 YPSPVDWCVGEVRKLAAGGGHSAV 410
+ P V +A GG HSAV
Sbjct: 218 HLDPPRLGGDRVVAVACGGQHSAV 241
>gi|358335048|dbj|GAA31002.2| E3 ubiquitin-protein ligase HERC4 [Clonorchis sinensis]
Length = 1185
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 115/430 (26%), Positives = 178/430 (41%), Gaps = 108/430 (25%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLG--DGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
+ACG++HT + +DG +++ G NEFGQLG D + R ++ L++ + I+CGA+
Sbjct: 47 VACGYKHTLFLNADGEVYSCGGNEFGQLGRSDSPSDFR----RITALENHTITDIACGAY 102
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQN-------QGSNFPRLFWGAFTPNTIICQVSCGSV 177
AAI+ T RL+ WG N +G + + + ++ QVS G
Sbjct: 103 HNAAIS---------YTGRLFTWGCNSNGQLGREGDDSSVKMIRSLAEHRVV-QVSLGLE 152
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H + L++ L +G N +GQLG G + P VI L P I +S G
Sbjct: 153 HSLVLTDTSRLFVFGSNIWGQLGLGFRSD---LPIVIPQQLMCLAGLP----IRCISAGG 205
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL------------------------ 273
HSA ++ +G +Y WG GQLG +++ E +
Sbjct: 206 VHSAVLTISGTLYVWGGNKYGQLGLEPIETVAAETVSGSRSSIENAPVWCGNKYGQLGLE 265
Query: 274 ---------------------------PRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
P V +L G V CG H+ LT +G ++
Sbjct: 266 PIETVAAETVSGSRSSIENAPQHSVSVPTAVRSLKGQRAVFVDCGESHTVVLTEEGGVFT 325
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD-GR 365
+GG+Q GQLG G ++S S+ +D ++ N VACG HTLV + G
Sbjct: 326 YGGNQFGQLGHGESSKSVSIPRKVAD---------LMDNPTTQVACGRMHTLVLVPSLGC 376
Query: 366 IHGWGYNSYGQAANEKSTYAWYPSPVD--WCVG---------------EVRKLAAGGGHS 408
++ +G S GQ +T + P+ V W EV +L AGG H+
Sbjct: 377 VYAFGAGSEGQLGTNTNTDSSRPTLVKGPWLTRGFSSNQSTNSPDVPLEVARLYAGGDHA 436
Query: 409 AVLADACSLK 418
L ++K
Sbjct: 437 YALTRKSTIK 446
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 145/363 (39%), Gaps = 83/363 (22%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A +Y G N GQ GR P + A N DIACG H AA++
Sbjct: 59 ADGEVYSCGGNEFGQLGRSDS----------PSDFRRITALENHTITDIACGAYHNAAIS 108
Query: 79 SDGTLFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG 137
G LFTWG N GQLG +G + K ++ L V +S G + + +
Sbjct: 109 YTGRLFTWGCNSNGQLGREGDDSSVK---MIRSLAEHRVVQVSLGLEHSLVLTD------ 159
Query: 138 TISTSRLWVWGQN----QGSNFPRLFWGAFTPNTIICQ-------VSCGSVHVVALSECG 186
TSRL+V+G N G F R P ++C +S G VH L+ G
Sbjct: 160 ---TSRLFVFGSNIWGQLGLGF-RSDLPIVIPQQLMCLAGLPIRCISAGGVHSAVLTISG 215
Query: 187 LLQAWGYNEYGQLG----RGITCEGLQGPR----------------------------VI 214
L WG N+YGQLG + E + G R +
Sbjct: 216 TLYVWGGNKYGQLGLEPIETVAAETVSGSRSSIENAPVWCGNKYGQLGLEPIETVAAETV 275
Query: 215 KGYAKFLDEAPEL-------------EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG 261
G ++ AP+ ++ V CGE H+ ++E G V+T+G GQLG
Sbjct: 276 SGSRSSIENAPQHSVSVPTAVRSLKGQRAVFVDCGESHTVVLTEEGGVFTYGGNQFGQLG 335
Query: 262 HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYAWGGSQAGQLGLGPQ 320
H +S +PR+V L VACG +H+ L S G +YA+G GQLG
Sbjct: 336 HG--ESSKSVSIPRKVADLMDNPTTQVACGRMHTLVLVPSLGCVYAFGAGSEGQLGTNTN 393
Query: 321 TRS 323
T S
Sbjct: 394 TDS 396
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 164/383 (42%), Gaps = 73/383 (19%)
Query: 83 LFTWGANEFGQLGDGTEEGRK--HPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
LF WGA + QLG ++ ++ P+ + + ++CG T + DG +
Sbjct: 9 LFGWGACDDNQLGPHEQDSQQISSPQPITVPNPWTIAHVACGYKHTLFL----NADGEVY 64
Query: 141 TSRLWVWGQ----NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
+ +GQ + S+F R+ N I ++CG+ H A+S G L WG N
Sbjct: 65 SCGGNEFGQLGRSDSPSDFRRI---TALENHTITDIACGAYHNAAISYTGRLFTWGCNSN 121
Query: 197 GQLGRGITCEGLQGP-RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
GQLGR EG ++I+ A+ ++ QVS G HS +++ ++ +G
Sbjct: 122 GQLGR----EGDDSSVKMIRSLAE--------HRVVQVSLGLEHSLVLTDTSRLFVFGSN 169
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
GQLG +S ++P++++ L G+ I+ ++ GGVHS LT G LY WGG++ GQL
Sbjct: 170 IWGQLG-LGFRSDLPIVIPQQLMCLAGLPIRCISAGGVHSAVLTISGTLYVWGGNKYGQL 228
Query: 316 GLGPQTRSFSLIPNESDTYFRNIPI----------------------------------- 340
GL P + + S + N P+
Sbjct: 229 GLEPIETVAAETVSGSRSSIENAPVWCGNKYGQLGLEPIETVAAETVSGSRSSIENAPQH 288
Query: 341 -LVVPNGVQ--------LVACGHSHTLVYMRDGRIHGWGYNSYGQAAN-EKSTYAWYPSP 390
+ VP V+ V CG SHT+V +G + +G N +GQ + E S P
Sbjct: 289 SVSVPTAVRSLKGQRAVFVDCGESHTVVLTEEGGVFTYGGNQFGQLGHGESSKSVSIPRK 348
Query: 391 V-DWCVGEVRKLAAGGGHSAVLA 412
V D ++A G H+ VL
Sbjct: 349 VADLMDNPTTQVACGRMHTLVLV 371
>gi|281344276|gb|EFB19860.1| hypothetical protein PANDA_001439 [Ailuropoda melanoleuca]
Length = 993
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 122/258 (47%), Gaps = 39/258 (15%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I Q++CG H +ALS+ G L AWG N +GQLG G + P+ ++ L P
Sbjct: 108 IIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEH----LSGVP--- 160
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
+ Q+S G+ HS A+S +G VY+WG +GQLG L D E P + LD ++ +
Sbjct: 161 -LVQISAGKAHSMALSMSGNVYSWGRNDLGQLG---LGHTDGEDFPSLIETLDNQQVEFL 216
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---N 345
ACGG H+ LT+ G ++ +G + GQLG N + R P LV N
Sbjct: 217 ACGGSHTALLTTDGLVFTFGAGKYGQLG-----------HNSTQNELR--PRLVTELAGN 263
Query: 346 GVQLVACGHSHTLVYMRD-GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRK---- 400
V +ACG HTL Y+ D G++ +G GQ N + P P+ E K
Sbjct: 264 RVTQIACGRRHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELKFESR 323
Query: 401 -------LAAGGGHSAVL 411
+ AGG S +L
Sbjct: 324 TSDKELVMIAGGNQSVLL 341
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 96/200 (48%), Gaps = 21/200 (10%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+ I Q++CG+YHS A+S+ GE++ WG GQLG L + P+ V L G+ +
Sbjct: 106 KSIIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPT--PQAVEHLSGVPLVQ 163
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP--- 344
++ G HS AL+ G +Y+WG + GQLGLG T + P L+
Sbjct: 164 ISAGKAHSMALSMSGNVYSWGRNDLGQLGLG-------------HTDGEDFPSLIETLDN 210
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAA 403
V+ +ACG SHT + DG + +G YGQ + + P V G V ++A
Sbjct: 211 QQVEFLACGGSHTALLTTDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQIAC 270
Query: 404 GGGHSAVLADACSLKELCEF 423
G H+ LA L ++ F
Sbjct: 271 GRRHT--LAYVSDLGKVFSF 288
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 101/210 (48%), Gaps = 32/210 (15%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISCGA 123
+ IACG H+ A++ G LF WG N GQLG G P+ V+ L + IS G
Sbjct: 109 IQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAGK 168
Query: 124 HCTAAIAEPRENDGTISTSRLWVWGQN----------QGSNFPRLFWGAFTPNTIICQVS 173
+ A++ + ++ WG+N G +FP L N + ++
Sbjct: 169 AHSMALS---------MSGNVYSWGRNDLGQLGLGHTDGEDFPSLI--ETLDNQQVEFLA 217
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
CG H L+ GL+ +G +YGQLG T L+ PR++ A ++TQ+
Sbjct: 218 CGGSHTALLTTDGLVFTFGAGKYGQLGHNSTQNELR-PRLVTELAG--------NRVTQI 268
Query: 234 SCGEYHSAA-VSENGEVYTWGLGSVGQLGH 262
+CG H+ A VS+ G+V+++G G GQLG+
Sbjct: 269 ACGRRHTLAYVSDLGKVFSFGSGKEGQLGN 298
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 87/186 (46%), Gaps = 19/186 (10%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G + P Q L G P + I+ G H+ A++ G
Sbjct: 127 LFAWGQNLHGQLGVGRLFASIPTP-QAVEHLSGVPL------VQISAGKAHSMALSMSGN 179
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+++WG N+ GQLG G +G P ++ L ++ V+ ++CG TA + DG + T
Sbjct: 180 VYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHTALLT----TDGLVFTF 235
Query: 143 RLWVWGQ-----NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYNEY 196
+GQ Q PRL + Q++CG H +A +S+ G + ++G +
Sbjct: 236 GAGKYGQLGHNSTQNELRPRLV--TELAGNRVTQIACGRRHTLAYVSDLGKVFSFGSGKE 293
Query: 197 GQLGRG 202
GQLG G
Sbjct: 294 GQLGNG 299
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD-G 81
++ +G GQ G + +LR P L AG +R IACG HT A SD G
Sbjct: 232 VFTFGAGKYGQLGHNSTQNELR------PRLVTELAG--NRVTQIACGRRHTLAYVSDLG 283
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVK 117
+F++G+ + GQLG+G + P +K +E +K
Sbjct: 284 KVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELK 319
>gi|224138854|ref|XP_002322918.1| predicted protein [Populus trichocarpa]
gi|222867548|gb|EEF04679.1| predicted protein [Populus trichocarpa]
Length = 467
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 164/378 (43%), Gaps = 65/378 (17%)
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEG-------RKHPEKVKQLQSEFVKSISCGAHCTAA 128
A A G L+TWG E LG +G + + K L +E V S A+
Sbjct: 112 AAADTGELYTWGWKECVPLGKFPRDGASWGALQKDNAAKQNVLSTEQVSS--------AS 163
Query: 129 IAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG------AFTPNTIICQVSCGSVHVVAL 182
+ R + + R+ + +N+ S + ++ + P I V+ G H +AL
Sbjct: 164 SDDKRNGEEIVKRRRVSLKEENENSEYGDEYFTVTPAIVSLGPGVRITSVAAGGRHTLAL 223
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK------------- 229
S+ G + WGY GQLG G + + P +I E P K
Sbjct: 224 SDTGQVWGWGYGGEGQLGLGSRVKMVSSPHLIP-----FTEQPTTGKHRSSVVHNGSTNL 278
Query: 230 -----------ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
+ +++CG HSA V++ G + T+G G GQ GH S + +L P +
Sbjct: 279 PAQVSNFPGSYVKEIACGGRHSAVVTDAGTLLTFGWGLYGQCGHGST---NDQLRPTSLP 335
Query: 279 ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
+L GI I+ +A G H+ +T G +Y +GG+Q GQLG G E+
Sbjct: 336 SLSGIQIERIAAGLWHTMCITIDGRVYVFGGNQFGQLGTGASQ-------GETLPRLLED 388
Query: 339 PILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPS--PVDWCVG 396
P L V++V+CG H+ + + DG++ WG+N YGQ S P+ P++ C
Sbjct: 389 PCL-ESKLVKMVSCGARHSAILLEDGQVFSWGWNKYGQLGVGDSIDRNTPTQVPIEGC-- 445
Query: 397 EVRKLAAGGGHSAVLADA 414
+ +A G H+ +LA+
Sbjct: 446 RPKMVACGWWHTLLLAET 463
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 138/309 (44%), Gaps = 62/309 (20%)
Query: 59 GANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS----E 114
G R +A G HT A++ G ++ WG GQLG G+ +VK + S
Sbjct: 205 GPGVRITSVAAGGRHTLALSDTGQVWGWGYGGEGQLGLGS--------RVKMVSSPHLIP 256
Query: 115 FVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSC 174
F + + G H ++ + N +N P + P + + +++C
Sbjct: 257 FTEQPTTGKHRSSVV-------------------HNGSTNLPAQV--SNFPGSYVKEIAC 295
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G H +++ G L +G+ YGQ G G T + L+ P + + +I +++
Sbjct: 296 GGRHSAVVTDAGTLLTFGWGLYGQCGHGSTNDQLR-PTSLPSLSGI--------QIERIA 346
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV--VALDGIFIKDVACGG 292
G +H+ ++ +G VY +G GQLG + Q E LPR + L+ +K V+CG
Sbjct: 347 AGLWHTMCITIDGRVYVFGGNQFGQLGTGASQG---ETLPRLLEDPCLESKLVKMVSCGA 403
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV--QLV 350
HS L G +++WG ++ GQLG+G D+ RN P V G ++V
Sbjct: 404 RHSAILLEDGQVFSWGWNKYGQLGVG-------------DSIDRNTPTQVPIEGCRPKMV 450
Query: 351 ACGHSHTLV 359
ACG HTL+
Sbjct: 451 ACGWWHTLL 459
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 89/213 (41%), Gaps = 45/213 (21%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIP-----------------------KQLPPELFGCPAG 59
++ WGY GQ G R + + P LP ++ P
Sbjct: 229 VWGWGYGGEGQLGLGSRVKMVSSPHLIPFTEQPTTGKHRSSVVHNGSTNLPAQVSNFPG- 287
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
S +IACG H+A V GTL T+G +GQ G G+ + P + L ++ I
Sbjct: 288 --SYVKEIACGGRHSAVVTDAGTLLTFGWGLYGQCGHGSTNDQLRPTSLPSLSGIQIERI 345
Query: 120 SCGAHCTAAIAEPRENDGTISTSRLWVWGQNQ----------GSNFPRLFWGAFTPNTII 169
+ G T I TI R++V+G NQ G PRL + ++
Sbjct: 346 AAGLWHTMCI--------TID-GRVYVFGGNQFGQLGTGASQGETLPRLLEDPCLESKLV 396
Query: 170 CQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
VSCG+ H L E G + +WG+N+YGQLG G
Sbjct: 397 KMVSCGARHSAILLEDGQVFSWGWNKYGQLGVG 429
>gi|224061683|ref|XP_002192615.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Taeniopygia
guttata]
Length = 4864
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 167/377 (44%), Gaps = 85/377 (22%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPP-------- 51
MD + T+RP D ++ K +Y+WG GQ GR + IP P
Sbjct: 3979 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMIPAAAPSFSPAQQVV 4036
Query: 52 -------------ELFGCPAGANSRW------------------------LDIACGHE-H 73
+ C G+ R L +CG + H
Sbjct: 4037 CGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGH 4096
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
+ A+ G +F+WG ++G+LG G + ++ P +++ LQ E V +SCG +A +
Sbjct: 4097 SMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTA-- 4154
Query: 134 ENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-----------ICQVSCGSVHVVAL 182
DG +L+ +G ++ RL G + + I QV+CG H VA+
Sbjct: 4155 --DG-----KLFTFGNG---DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAV 4204
Query: 183 SECG-LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
S G ++ A+G +YG+LG G P+ + I +V+CG S
Sbjct: 4205 STDGSMVWAFGDGDYGKLGLG-NSTAKSSPQKVDILCGI--------GIKKVACGTQFSV 4255
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A++++G VYT+G + L ++ ++ P++V L G+FI+D+A G H+ AL+S
Sbjct: 4256 ALTKDGHVYTFGQDRLIGLPEGRARNHNR---PQQVPLLAGVFIEDIAVGAEHTLALSST 4312
Query: 302 GALYAWGGSQAGQLGLG 318
G +YAWG + GQLGLG
Sbjct: 4313 GDVYAWGSNSEGQLGLG 4329
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 172/382 (45%), Gaps = 79/382 (20%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI--- 139
++ WGA GQL E GR + + CG +CT I + +GT+
Sbjct: 4002 VYLWGAGRHGQLA---EAGRNVMIPAAAPSFSPAQQVVCGQNCTFVI----QANGTVLAC 4054
Query: 140 ---STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQV--SCGSV-HVVALSECGLLQAWGY 193
S RL GQ + L + ++ Q+ SCGS H +AL+E G + +WG
Sbjct: 4055 GEGSYGRL---GQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4111
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
+YG+LG G + + PR I EA + E++ Q+SCG HSA V+ +G+++T+G
Sbjct: 4112 GDYGKLGHG-NSDRQRRPRQI--------EALQGEEVVQMSCGFKHSAVVTADGKLFTFG 4162
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL-YAWGGSQA 312
G G+LG L + + LP RV AL+G I VACG H+ A+++ G++ +A+G
Sbjct: 4163 NGDYGRLG---LGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDY 4219
Query: 313 GQLGLGPQTRSFSLIPNESDTY--------------------------FRNIPILVVPNG 346
G+LGLG T S P + D F ++ +P G
Sbjct: 4220 GKLGLGNSTAKSS--PQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4277
Query: 347 ------------------VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYP 388
++ +A G HTL G ++ WG NS GQ + + P
Sbjct: 4278 RARNHNRPQQVPLLAGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREP 4337
Query: 389 SPVDWCVGE-VRKLAAGGGHSA 409
+ V G+ VR+++AG HSA
Sbjct: 4338 TLVTVLQGKNVRQISAGRCHSA 4359
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 182/405 (44%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ P+L + A + I G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQ------PKLASSFSDAQT----IEAGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG----T 138
+ G +G+LG G + +K+L E +SI ++ + +DG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQS---TLKKLTFEPHRSIK-------KVSSSKGSDGHTLAF 473
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ ++ WG + +P+L G ++C VS G H A++E G L
Sbjct: 474 TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGEL 532
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G P ++K ++ + +VSCG H+ A+S++G
Sbjct: 533 YTWGEGDFGRLGHG-DSNSRNIPTLVK----------DIINVGEVSCGSSHTIALSKDGR 581
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ + AL G+FI+ V G S ALTS G +Y
Sbjct: 582 TVWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVY 636
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V ++ G SH L D
Sbjct: 637 AWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-ISIGDSHCLALSHDNE 685
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVGGLDGIAIQQISAGTSHS 730
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 142/307 (46%), Gaps = 43/307 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V +DG
Sbjct: 4106 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTADGK 4157
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG++
Sbjct: 4158 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVS----TDGSM--- 4210
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNT------IIC-----QVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T + I+C +V+CG+ VAL++ G + +
Sbjct: 4211 -VWAFGDG---DYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTF 4266
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ + A I ++ G H+ A+S G+VY
Sbjct: 4267 GQDRLIGLPEG-RARNHNRPQQVPLLAGVF--------IEDIAVGAEHTLALSSTGDVYA 4317
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWGGS 310
WG S GQLG L + P V L G ++ ++ G HS A T+ A G S
Sbjct: 4318 WGSNSEGQLG---LGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVS 4374
Query: 311 QAGQLGL 317
QLGL
Sbjct: 4375 VPLQLGL 4381
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDIIN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P I I +V GS +AL+ G + AW
Sbjct: 583 -VWSFG---GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I +S G+ H A+S + EVY
Sbjct: 639 GCG--ACLGCGSSEATALRPKLIEELAA--------TRIVDISIGDSHCLALSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDGI I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVGGLDGIAIQQISAGTSHSLAWTA 735
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 98/231 (42%), Gaps = 29/231 (12%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +GQL G V+ A AP QV CG+ + + NG V
Sbjct: 4005 WGAGRHGQLAEA-------GRNVMIPAA-----APSFSPAQQVVCGQNCTFVIQANGTVL 4052
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGALYAW 307
G GS G+LG + S D +L + AL G + + +CG HS ALT G +++W
Sbjct: 4053 ACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSW 4109
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G R R I L VQ+ +CG H+ V DG++
Sbjct: 4110 GDGDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTADGKLF 4159
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
+G YG+ ++ P V G ++ ++A G H+ ++ S+
Sbjct: 4160 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTDGSM 4210
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VSE EVY WG S QL G +E + + +A + + G + +++ G
Sbjct: 368 VSETCEVYVWGSNSSHQLVE-----GTQEKILQPKLASSFSDAQTIEAGQYCTFVISTDG 422
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ A G G+LGLG +L + + R+I + G HTL +
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RSIKKVSSSKG------SDGHTLAFTT 475
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+G + WG YG+ + S+ YP + + G+V ++AG HSA + +
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
>gi|301791658|ref|XP_002930797.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like, partial
[Ailuropoda melanoleuca]
Length = 348
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 141/304 (46%), Gaps = 39/304 (12%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V + +F +G N LG G + P+K++ L + +KS+S G+ ++ D
Sbjct: 37 VTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLST---ED 93
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQV---SCGSVHVVALSECGL 187
G + + WG N G+ + N +I QV +CGS H +AL+ G
Sbjct: 94 GVV-----YAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGE 148
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWGYN GQ+G G T PR + ++++ ++CG+ S AV +NG
Sbjct: 149 VFAWGYNNCGQVGSGST-TNQPTPRKVT-------NCLHIKRVVGIACGQTSSMAVLDNG 200
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
EVY WG GQLG L + +L P RV AL + + + CG H+ ALT +G LYAW
Sbjct: 201 EVYGWGYNGNGQLG---LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAW 257
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRI 366
G + GQLG G + S P + V++ AC +HT + G +
Sbjct: 258 GANTYGQLGTGNKNNLLS--PAHIMVEKERV--------VEIAACHSAHTSAAKTQGGHV 307
Query: 367 HGWG 370
+ WG
Sbjct: 308 YMWG 311
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 105/202 (51%), Gaps = 26/202 (12%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HV+ +E G++ AWG+N Y QLG G T +G+ +V ++++ +V+CG
Sbjct: 86 HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLL--------IKQVVEVACGS 137
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV---ACGGVH 294
+HS A++ +GEV+ WG + GQ+G S + PR+V + + IK V ACG
Sbjct: 138 HHSMALAADGEVFAWGYNNCGQVGS---GSTTNQPTPRKVT--NCLHIKRVVGIACGQTS 192
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGH 354
S A+ G +Y WG + GQLGLG + + R + V V + CG+
Sbjct: 193 SMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPV--------RVAALHSVC--VNQIVCGY 242
Query: 355 SHTLVYMRDGRIHGWGYNSYGQ 376
+HTL +G ++ WG N+YGQ
Sbjct: 243 AHTLALTDEGLLYAWGANTYGQ 264
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 112/243 (46%), Gaps = 37/243 (15%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG+N Q G G Q P Q+ L + +++ACG H+ A+A+DG
Sbjct: 95 VVYAWGHNGYSQLGN-GTTNQGIAPIQVCTNLL------IKQVVEVACGSHHSMALAADG 147
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+F WG N GQ+G G+ + P KV L + V I+CG + A+ + E G
Sbjct: 148 EVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYG--- 204
Query: 141 TSRLWVWGQN------QGSNFPRLFWGAFTPNTIIC--QVSCGSVHVVALSECGLLQAWG 192
WG N G+N +L +C Q+ CG H +AL++ GLL AWG
Sbjct: 205 ------WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G L ++ E E++ ++ +C H SAA ++ G VY
Sbjct: 259 ANTYGQLGTGNKNNLLSPAHIMV----------EKERVVEIAACHSAHTSAAKTQGGHVY 308
Query: 251 TWG 253
WG
Sbjct: 309 MWG 311
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 140/334 (41%), Gaps = 46/334 (13%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G +A + ++V+G N+S G G + +PK+L G + L
Sbjct: 26 VFGTSANEALYVTDNDEVFVFGLNYSNCLG-TGDNQSTLVPKKLEAL-----CGKKIKSL 79
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV-KQLQSEFVKSISCGAH 124
G H DG ++ WG N + QLG+GT P +V L + V ++CG+H
Sbjct: 80 SYGSG-PHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSH 138
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQ------GSN----FPRLFWGAFTPNTIICQVSC 174
+ A+A E ++ WG N GS PR ++ ++C
Sbjct: 139 HSMALAADGE---------VFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVV-GIAC 188
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G +A+ + G + WGYN GQLG G L RV A + Q+
Sbjct: 189 GQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRV---------AALHSVCVNQIV 239
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGG 292
CG H+ A+++ G +Y WG + GQLG +G+K L P ++ ++ AC
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLG-----TGNKNNLLSPAHIMVEKERVVEIAACHS 294
Query: 293 VH-SCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
H S A T G +Y WG + GQ + P FS
Sbjct: 295 AHTSAAKTQGGHVYMWGQCR-GQSVVLPHLTHFS 327
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 82/173 (47%), Gaps = 17/173 (9%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHSCALT 299
V++N EV+ +GL LG +GD + L+P+++ AL G IK ++ G G H T
Sbjct: 37 VTDNDEVFVFGLNYSNCLG-----TGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLST 91
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
G +YAWG + QLG G + + I ++ + V VACG H++
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQ---------VVEVACGSHHSMA 142
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
DG + WGYN+ GQ + +T P V C+ R + G ++ +A
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMA 195
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 20/151 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WGYN +GQ G QL P ++ C I CG+ HT A+ +G
Sbjct: 202 VYGWGYNGNGQLGLGNNGNQLT-PVRVAALHSVCVN-------QIVCGYAHTLALTDEGL 253
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
L+ WGAN +GQLG G + P + + V+ +C AH +AA +
Sbjct: 254 LYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQG--------- 304
Query: 142 SRLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 305 GHVYMWGQCRGQSVVLPHLTHFSCTDDVFAC 335
>gi|346972722|gb|EGY16174.1| RCC1 domain-containing protein [Verticillium dahliae VdLs.17]
Length = 665
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 117/433 (27%), Positives = 179/433 (41%), Gaps = 57/433 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIP-----KQLPPELFGCPAGANSRWLDIACGHEHTAAV 77
+YV+G SG+ G ++ + P ++ L P G + IACG H AA+
Sbjct: 238 VYVFGEGSSGELGLGSKKHDGKKPIDVKRPRINHNLARTPVGV----VQIACGGMHVAAL 293
Query: 78 ASDGTLFTWGANEFGQLGDGT--EEGRKHPEKVKQLQSEF------------------VK 117
D + TWG N+ G LG T + G + ++ S+ +
Sbjct: 294 THDNKILTWGVNDQGALGRDTNWDGGLRDADQASDSGSDDEDDDSGVNPRESTPTAVSAE 353
Query: 118 SISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSN----FPRLFWGAFTPNTI----- 168
+ A +A R++ WG + S+ F + TP I
Sbjct: 354 HFAPDAKFVQVVASDSATFALTEDGRVYGWGTFRSSDGILGFNQDIKIQMTPLYIPELKS 413
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I ++ GS H++AL G + AWG + QLGR I V +G P+ +
Sbjct: 414 IKALAAGSNHILALENKGNVLAWGCGQQNQLGRRIIERNKMSSLVPQGMG-----IPK-K 467
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE-----LLPRRVVALDGI 283
I +++CG+YHS A+ G VY WGL + + G ++ G E L P V +L+
Sbjct: 468 NIEKIACGQYHSFALDTKGRVYAWGLNNFAETG---IREGAGEDDAVILRPTIVDSLEEH 524
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRS-FSLIPNESDT-YFRNIPIL 341
I D+A G HS A T G L WG Q+G S LI +ES+ +P +
Sbjct: 525 KIVDIAGGQHHSLACTEDGKLLTWGRFDGFQVGFAESAVSEDDLIRDESNNARILAVPTV 584
Query: 342 V-VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRK 400
V P GV VA G + +DG+ + WG++S Q P+ +D +K
Sbjct: 585 VPSPEGVVRVAAGTDNNFAITKDGKAYSWGFSSNYQTGQGTIEDVEAPTLIDNTAVRGQK 644
Query: 401 L--AAGGGHSAVL 411
L A GG ++L
Sbjct: 645 LVSAGAGGQFSIL 657
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 79/203 (38%), Gaps = 51/203 (25%)
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELL----PR--RVVALDGIFIKDVACGGVHSCALTSK 301
+VY +G GS G+LG S + K+ + PR +A + + +ACGG+H ALT
Sbjct: 237 DVYVFGEGSSGELGLGSKKHDGKKPIDVKRPRINHNLARTPVGVVQIACGGMHVAALTHD 296
Query: 302 GALYAWGGSQAGQLGLGPQ-------------------TRSFSLIPNESDTYFRNIPILV 342
+ WG + G LG + P ES P V
Sbjct: 297 NKILTWGVNDQGALGRDTNWDGGLRDADQASDSGSDDEDDDSGVNPRES------TPTAV 350
Query: 343 -----VPNG--VQLVACGHSHTLVYMRDGRIHGWG-YNS------YGQAANEKSTYAWYP 388
P+ VQ+VA S T DGR++GWG + S + Q + T + P
Sbjct: 351 SAEHFAPDAKFVQVVAS-DSATFALTEDGRVYGWGTFRSSDGILGFNQDIKIQMTPLYIP 409
Query: 389 SPVDWCVGEVRKLAAGGGHSAVL 411
+ ++ LAAG H L
Sbjct: 410 E-----LKSIKALAAGSNHILAL 427
>gi|55832766|gb|AAV66896.1| truncated HERC6 [Homo sapiens]
Length = 364
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 123/242 (50%), Gaps = 19/242 (7%)
Query: 168 IICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL 227
I+ VSCG H +A+ G + AWG GQLG G E P+ I
Sbjct: 76 IVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDI------- 128
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
KI QVSCG YHS A+S++ +V++WG S GQLG + + P+RV +L+GI +
Sbjct: 129 -KIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQ 185
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN-G 346
VA GG HS AL+ G + WG + AGQL L + +P +S+ + + + + N G
Sbjct: 186 VAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRN-----VPVQSN---KPLSVGALKNLG 237
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGG 406
V ++CG +HT V +DG++ +G N GQ + P V+ G V ++ G
Sbjct: 238 VVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSY 297
Query: 407 HS 408
H+
Sbjct: 298 HT 299
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 159/365 (43%), Gaps = 55/365 (15%)
Query: 62 SRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC 121
+ L A G H+ + ++ + + G N GQLG + + PE ++ L++ V +SC
Sbjct: 23 AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSC 82
Query: 122 GAHCTAAIAEPRENDGTISTSRLWVW-----GQNQGSNFPRLFWGAFTPNTI-------I 169
G + A+ R++ W GQ F + +FTP I I
Sbjct: 83 GKEHSLAVCH---------KGRVFAWGAGSEGQLGIGEFKEI---SFTPKKIMTLNDIKI 130
Query: 170 CQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK 229
QVSCG H +ALS+ + +WG N +GQLG G P+ ++ L+ P
Sbjct: 131 IQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRS----LEGIP---- 182
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ QV+ G HS A+S G + WG S GQL + P V AL + + ++
Sbjct: 183 LAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYIS 242
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGV 347
CG H+ LT G ++ +G +++GQLG P T + P LV + V
Sbjct: 243 CGDAHTAVLTQDGKVFTFGDNRSGQLGYSP-------------TPEKRGPQLVERIDGLV 289
Query: 348 QLVACGHSHTLVYMR-DGRIHGWGYN-------SYGQAANEKSTYAWYPSPVDWCVGEVR 399
+ CG HTL Y+ G++ +G+ ++ +A E + S D+ +V+
Sbjct: 290 SQIDCGSYHTLAYVHTTGQVVSFGHGPSDTSKPTHPEALTENFDISCLISAEDFVDVQVK 349
Query: 400 KLAAG 404
+ AG
Sbjct: 350 HIFAG 354
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 142/316 (44%), Gaps = 62/316 (19%)
Query: 27 GYNHSGQTGRKGRER-QLRIPKQLPPELFGCPAGANSRWLD-IACGHEHTAAVASDGTLF 84
G N GQ GR+G +R +L P Q L +D ++CG EH+ AV G +F
Sbjct: 48 GDNSRGQLGRRGAQRGELPEPIQALETLI----------VDLVSCGKEHSLAVCHKGRVF 97
Query: 85 TWGANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSR 143
WGA GQLG G +E P+K+ L + +SCG + + A+++ S+
Sbjct: 98 AWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK---------DSQ 148
Query: 144 LWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQA 190
++ WG+N G FP +P + + QV+ G H ALS CG
Sbjct: 149 VFSWGKNSHGQLGLGKEFP----SQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFG 204
Query: 191 WGYNEYGQL---GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
WG N GQL GR + + + V G K L + +SCG+ H+A ++++G
Sbjct: 205 WGSNSAGQLALSGRNVPVQSNKPLSV--GALKNLG-------VVYISCGDAHTAVLTQDG 255
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
+V+T+G GQLG+ ++ P+ V +DG+ + + CG H+ A Y
Sbjct: 256 KVFTFGDNRSGQLGYSPT---PEKRGPQLVERIDGL-VSQIDCGSYHTLA-------YVH 304
Query: 308 GGSQAGQLGLGPQTRS 323
Q G GP S
Sbjct: 305 TTGQVVSFGHGPSDTS 320
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 95/186 (51%), Gaps = 14/186 (7%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
++ Q + GE HS + N V + G S GQLG Q G+ LP + AL+ + + V
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGE---LPEPIQALETLIVDLV 80
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
+CG HS A+ KG ++AWG GQLG+G + + S P + T +I I+
Sbjct: 81 SCGKEHSLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKIMT-LNDIKII------- 131
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGG 406
V+CGH H+L +D ++ WG NS+GQ K + P V G + ++AAGG
Sbjct: 132 QVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 191
Query: 407 HSAVLA 412
HS L+
Sbjct: 192 HSFALS 197
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 117/242 (48%), Gaps = 25/242 (10%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG GQ G + PK++ + + + ++CGH H+ A++
Sbjct: 93 KGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTL-------NDIKIIQVSCGHYHSLALSK 145
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISC-GAHCTA-AIAEPREND 136
D +F+WG N GQLG G E + P++V+ L+ + ++ GAH A ++
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW 205
Query: 137 GTISTSRLWVWGQN--QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
G+ S +L + G+N SN P L GA N + +SCG H L++ G + +G N
Sbjct: 206 GSNSAGQLALSGRNVPVQSNKP-LSVGALK-NLGVVYISCGDAHTAVLTQDGKVFTFGDN 263
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEVYTWG 253
GQLG T E +GP++++ ++Q+ CG YH+ A V G+V ++G
Sbjct: 264 RSGQLGYSPTPEK-RGPQLVERIDGL---------VSQIDCGSYHTLAYVHTTGQVVSFG 313
Query: 254 LG 255
G
Sbjct: 314 HG 315
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 58/144 (40%), Gaps = 12/144 (8%)
Query: 270 KELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPN 329
+EL RR G + A G HS L + + + G + GQLG R
Sbjct: 10 RELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQR------G 63
Query: 330 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ-AANEKSTYAWYP 388
E + + L+ V LV+CG H+L GR+ WG S GQ E ++ P
Sbjct: 64 ELPEPIQALETLI----VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTP 119
Query: 389 SPVDWCVGEVRKLAAGGGHSAVLA 412
+ + +++ + GH LA
Sbjct: 120 KKI-MTLNDIKIIQVSCGHYHSLA 142
>gi|344281808|ref|XP_003412669.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Loxodonta
africana]
Length = 551
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 114/227 (50%), Gaps = 22/227 (9%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H+V + G + WG+N Y QLG G T GL + + +++ +V+CG
Sbjct: 110 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCYISTNLSN--------KQVIEVACGS 161
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHSC 296
YHS ++ +GEV+ WG + GQ+G S + +PRRV L + ++ACG + S
Sbjct: 162 YHSLVLTSDGEVFAWGYNNSGQVGS---GSTANQPIPRRVTGCLQNKAVVNIACGQMCSM 218
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G +Y WG + GQLGLG T R + + VQ VACG++H
Sbjct: 219 AVVDAGEVYVWGYNGNGQLGLGSS--------GNQPTPCRVAALQGIH--VQRVACGYAH 268
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 403
TLV +G+++ WG NSYGQ + YP+P+ + ++AA
Sbjct: 269 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPISVEKDRIIEIAA 315
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 137/304 (45%), Gaps = 45/304 (14%)
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTAAIAEPRENDG 137
+ +F G N G LG G + P ++ L + + +S G+ H A E
Sbjct: 64 NNEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTE------ 117
Query: 138 TISTSRLWVWGQNQGSNFPR---------LFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG N S + N + +V+CGS H + L+ G +
Sbjct: 118 ----GEVFTWGHNAYSQLGNGTTNHGLVPCYISTNLSNKQVIEVACGSYHSLVLTSDGEV 173
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
AWGYN GQ+G G T PR + G + + + ++CG+ S AV + GE
Sbjct: 174 FAWGYNNSGQVGSGSTANQ-PIPRRVTG-------CLQNKAVVNIACGQMCSMAVVDAGE 225
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
VY WG GQLG L S + P RV AL GI ++ VACG H+ LT +G +YAWG
Sbjct: 226 VYVWGYNGNGQLG---LGSSGNQPTPCRVAALQGIHVQRVACGYAHTLVLTDEGQVYAWG 282
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG-VQLVACGHSHT-LVYMRDGRI 366
+ GQLG G N+S+ + PI V + +++ AC +HT + G +
Sbjct: 283 ANSYGQLGTG----------NKSNQSYPT-PISVEKDRIIEIAACHSTHTSAAKTQGGNV 331
Query: 367 HGWG 370
+ WG
Sbjct: 332 YMWG 335
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 115/242 (47%), Gaps = 37/242 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G +P + L +N + +++ACG H+ + SDG
Sbjct: 120 VFTWGHNAYSQLG-NGTTNHGLVPCYISTNL------SNKQVIEVACGSYHSLVLTSDGE 172
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P +V LQ++ V +I+CG C+ A+ + E
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKAVVNIACGQMCSMAVVDAGE------- 225
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N N P A + +V+CG H + L++ G + AWG
Sbjct: 226 --VYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIHVQRVACGYAHTLVLTDEGQVYAWGA 283
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVYT 251
N YGQLG G + + Y + + E ++I ++ +C H SAA ++ G VY
Sbjct: 284 NSYGQLG--------TGNKSNQSYPTPI--SVEKDRIIEIAACHSTHTSAAKTQGGNVYM 333
Query: 252 WG 253
WG
Sbjct: 334 WG 335
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 135/331 (40%), Gaps = 45/331 (13%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G + V + I+V G N G G + + P +G L
Sbjct: 50 VFGSASNEVLYTTVNNEIFVLGTNCCGCLGLGD------VQSTIEPRRLDSLSGKKIACL 103
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAH 124
G H ++G +FTWG N + QLG+GT P + L ++ V ++CG++
Sbjct: 104 SYGSG-PHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCYISTNLSNKQVIEVACGSY 162
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSN----------FPRLFWGAFTPNTIICQVSC 174
+ + +DG + + WG N PR G N + ++C
Sbjct: 163 HSLVLT----SDGEV-----FAWGYNNSGQVGSGSTANQPIPRRVTGCLQ-NKAVVNIAC 212
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G + +A+ + G + WGYN GQLG G + RV A + + +V+
Sbjct: 213 GQMCSMAVVDAGEVYVWGYNGNGQLGLGSSGNQPTPCRV---------AALQGIHVQRVA 263
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG 292
CG H+ +++ G+VY WG S GQLG +G+K + P + I+ AC
Sbjct: 264 CGYAHTLVLTDEGQVYAWGANSYGQLG-----TGNKSNQSYPTPISVEKDRIIEIAACHS 318
Query: 293 VH-SCALTSKGALYAWGGSQAGQLGLGPQTR 322
H S A T G +Y WG + + L TR
Sbjct: 319 THTSAAKTQGGNVYMWGQCRGQSVTLPHLTR 349
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 18/150 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G Q P A +ACG+ HT + +G
Sbjct: 226 VYVWGYNGNGQLGLGSSGNQ--------PTPCRVAALQGIHVQRVACGYAHTLVLTDEGQ 277
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WGAN +GQLG G + + +P + + ++ +C + T+A N
Sbjct: 278 VYAWGANSYGQLGTGNKSNQSYPTPISVEKDRIIEIAACHSTHTSAAKTQGGN------- 330
Query: 143 RLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 331 -VYMWGQCRGQSVTLPHLTRFSCTDDVFAC 359
>gi|190610056|gb|ACE79739.1| At5g60870 [Arabidopsis thaliana]
Length = 376
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 156/352 (44%), Gaps = 50/352 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+++WG G+ G G+E + +P P LF IA G H+ A+ G
Sbjct: 52 LWIWGKGDGGRLGF-GQENSVFVPNLNP--LF-----EEHSIRCIALGGLHSVALTHQGD 103
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+FTWG FG LG P +V + +I+ TAAI E E
Sbjct: 104 VFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGE-------- 155
Query: 143 RLWVWGQNQGSNFPRLFW--------GAFTPNTI------ICQVSCGSVHVVALSECGLL 188
L++WG+ +G L G P+ + + VSCG +AL++ G L
Sbjct: 156 -LYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASVSCGGFFTMALTKEGQL 214
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE--KITQVSCGEYHSAAVSEN 246
WG N +LGRG G + V P LE +ITQ++CG YHS A++E
Sbjct: 215 WNWGANSNYELGRGDNLGGWEPMPV-----------PSLEGVRITQIACGGYHSLALTEE 263
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
G+V +WG G GQLG SL++ + +P + AL I +A GG S A+T G L+
Sbjct: 264 GKVLSWGHGGHGQLGSSSLRN---QKVPTEIEALADKKIVFIASGGSSSAAITDGGELWM 320
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 358
WG ++ QLG+ P P E + F P+ V ++ G SH L
Sbjct: 321 WGNAKDFQLGV-PGLPEIQTTPVEVN--FLTEEDECQPHKVISISIGASHAL 369
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 145/330 (43%), Gaps = 51/330 (15%)
Query: 105 PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG--- 161
P ++ S F ISCG + G LW+WG+ G RL +G
Sbjct: 23 PGRIDADSSSFRIGISCGLF----------HSGLTIDGDLWIWGKGDGG---RLGFGQEN 69
Query: 162 -AFTPN--------TIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPR 212
F PN +I C ++ G +H VAL+ G + WGY +G LG + L R
Sbjct: 70 SVFVPNLNPLFEEHSIRC-IALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELVPRR 128
Query: 213 VIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL----GSVGQLGHCSLQSG 268
V D++ + KI+ ++ H+AA++E+GE+Y WG G +G G
Sbjct: 129 V--------DDSWDC-KISAIATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEG 179
Query: 269 DKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIP 328
+P +V AL + + V+CGG + ALT +G L+ WG + +LG G + +P
Sbjct: 180 GGLSVPSKVKALT-VPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMP 238
Query: 329 NESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYP 388
S R + +ACG H+L +G++ WG+ +GQ + P
Sbjct: 239 VPSLEGVR----------ITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVP 288
Query: 389 SPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
+ ++ ++ +A+GG SA + D L
Sbjct: 289 TEIEALADKKIVFIASGGSSSAAITDGGEL 318
>gi|211926988|dbj|BAG82722.1| hypothetical protein [uncultured bacterium]
Length = 782
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 168/386 (43%), Gaps = 61/386 (15%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A I WG+N GQ G P ++ G +G + +++ G EH+ A
Sbjct: 321 ADGGIQCWGWNEDGQLGDDSTTD-----AGAPVDVVGLASGVD----EVSLGEEHSCARI 371
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG + WG N GQLGD T++ R P V Q + GA T + A
Sbjct: 372 EDG-IQCWGNNNRGQLGDNTDDSRLTPVDVLQGGDVLAGISALGAGSTHSCA-------V 423
Query: 139 ISTSRLWVWGQNQGSNFPRLFWGAFTPNTI----------ICQVSCGSVHVVALSECGLL 188
++ + WG G++F +L G+ +T+ I V G H AL++ G +
Sbjct: 424 TNSGGILCWG---GNDFGQLGDGSTVTSTVAVEHSTLTSGIAAVGAGEDHTCALTDGGGV 480
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+ WG N GQLG G +++ ++ +D + ++ ++ G HS + + G
Sbjct: 481 KCWGRNSQGQLGNG---------KLVN-SSEPVDALLLSQGVSSLTTGGNHSCVLLDTGG 530
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
+ WG GQLG+ S + + + V L I +V+ G H+CA+TS GA+ WG
Sbjct: 531 IRCWGANGTGQLGNGSRSA---STVAQSVTGLTSGVI-NVSAGSSHTCAVTSSGAVKCWG 586
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS--HTLVYMRDGRI 366
+ GQ+G G T FR P+ VV G A HT M DGR+
Sbjct: 587 WNFYGQVGDGS-------------TDFRTEPVDVVGLGAGAAAVVAGRWHTCAIMDDGRV 633
Query: 367 HGWGYNSYGQAANEKSTYAWYPSPVD 392
WGYN YGQ + T P+PVD
Sbjct: 634 KCWGYNVYGQLGD--GTEDDSPTPVD 657
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 124/454 (27%), Positives = 165/454 (36%), Gaps = 99/454 (21%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+ WG N GQ G + P + G +G + I+ G HT A+ G
Sbjct: 121 AVLCWGNNFYGQLGDGTNDDSPS-----PVAVVGLESGVAA----ISAGGSHTCALTDGG 171
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+ WG N G +GDGT + R P V L S V +IS G T A+ +
Sbjct: 172 AVKCWGDNSAGAVGDGTGDDRNSPVDVDGLTSG-VAAISSGGGHTCALTD---------A 221
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPN---------------TIICQVSCGSVHVVALSECG 186
L WG N F G N T + VS G+ H AL E G
Sbjct: 222 GGLKCWGWN--------FRGQLGDNSEISRSSPVDVAGLSTGVTAVSSGAQHTCALLEEG 273
Query: 187 LLQAWGYNEYGQLGRGI-------------------------TC---------------E 206
+Q WG N QLG G TC +
Sbjct: 274 GVQCWGRNAENQLGDGTENGSLVPVDADGTEDAAGIHAGGFHTCITNADGGIQCWGWNED 333
Query: 207 GLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQ 266
G G +D + +VS GE HS A E+G + WG + GQLG
Sbjct: 334 GQLGDDSTTDAGAPVDVVGLASGVDEVSLGEEHSCARIEDG-IQCWGNNNRGQLGD---N 389
Query: 267 SGDKELLPRRVVALDGIF--IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSF 324
+ D L P V+ + I + G HSCA+T+ G + WGG+ GQLG G S
Sbjct: 390 TDDSRLTPVDVLQGGDVLAGISALGAGSTHSCAVTNSGGILCWGGNDFGQLGDGSTVTST 449
Query: 325 SLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTY 384
+ + + + +G+ V G HT G + WG NS GQ N K
Sbjct: 450 VAVEHST-----------LTSGIAAVGAGEDHTCALTDGGGVKCWGRNSQGQLGNGKLVN 498
Query: 385 AWYPSPVDWCVGEVRKLAAGGGHSAVLADACSLK 418
+ P V L GG HS VL D ++
Sbjct: 499 SSEPVDALLLSQGVSSLTTGGNHSCVLLDTGGIR 532
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 121/446 (27%), Positives = 175/446 (39%), Gaps = 83/446 (18%)
Query: 22 AIYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
A+ WG N +G G G +R P ++ G +G + I+ G HT A+
Sbjct: 172 AVKCWGDNSAGAVGDGTGDDRNS------PVDVDGLTSGVAA----ISSGGGHTCALTDA 221
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G L WG N GQLGD +E R P V L S V ++S GA T A+ E
Sbjct: 222 GGLKCWGWNFRGQLGDNSEISRSSPVDVAGL-STGVTAVSSGAQHTCALLEE-------- 272
Query: 141 TSRLWVWGQNQGSNFPR-LFWGAFTPNTIICQVSCGSVHVVALSEC-----GLLQAWGYN 194
+ WG+N + G+ P +H C G +Q WG+N
Sbjct: 273 -GGVQCWGRNAENQLGDGTENGSLVPVDADGTEDAAGIHAGGFHTCITNADGGIQCWGWN 331
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
E GQLG T + P + G A +DE VS GE HS A E+G + WG
Sbjct: 332 EDGQLGDDSTTD-AGAPVDVVGLASGVDE---------VSLGEEHSCARIEDG-IQCWGN 380
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIF--IKDVACGGVHSCALTSKGALYAWGGSQA 312
+ GQLG + D L P V+ + I + G HSCA+T+ G + WGG+
Sbjct: 381 NNRGQLGD---NTDDSRLTPVDVLQGGDVLAGISALGAGSTHSCAVTNSGGILCWGGNDF 437
Query: 313 GQLGLGPQTRSFSLIPNESDT------------------------YFRN----------- 337
GQLG G S + + + T + RN
Sbjct: 438 GQLGDGSTVTSTVAVEHSTLTSGIAAVGAGEDHTCALTDGGGVKCWGRNSQGQLGNGKLV 497
Query: 338 -----IPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVD 392
+ L++ GV + G +H+ V + G I WG N GQ N + + V
Sbjct: 498 NSSEPVDALLLSQGVSSLTTGGNHSCVLLDTGGIRCWGANGTGQLGNGSRSASTVAQSVT 557
Query: 393 WCVGEVRKLAAGGGHSAVLADACSLK 418
V ++AG H+ + + ++K
Sbjct: 558 GLTSGVINVSAGSSHTCAVTSSGAVK 583
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 121/457 (26%), Positives = 182/457 (39%), Gaps = 82/457 (17%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + + WG N SGQ G G +P +P S + ++ HT A
Sbjct: 66 VTSDGRVQCWGRNSSGQLG-NGSTADSALPITVP---------GLSDVVAVSASGFHTCA 115
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
G + WG N +GQLGDGT + P V L+S V +IS G T A+ +
Sbjct: 116 RTEAGAVLCWGNNFYGQLGDGTNDDSPSPVAVVGLESG-VAAISAGGSHTCALTD----- 169
Query: 137 GTISTSRLWVWGQNQGS----------NFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
+ WG N N P G + + +S G H AL++ G
Sbjct: 170 ----GGAVKCWGDNSAGAVGDGTGDDRNSPVDVDGLTSG---VAAISSGGGHTCALTDAG 222
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
L+ WG+N GQLG + +D A +T VS G H+ A+ E
Sbjct: 223 GLKCWGWNFRGQLGDNSEIS----------RSSPVDVAGLSTGVTAVSSGAQHTCALLEE 272
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA---CGGVHSCALTSKGA 303
G V WG + QLG + + L+P +D +D A GG H+C + G
Sbjct: 273 GGVQCWGRNAENQLGD---GTENGSLVP-----VDADGTEDAAGIHAGGFHTCITNADGG 324
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV--PNGVQLVACGHSHTLVYM 361
+ WG ++ GQLG + T P+ VV +GV V+ G H+ +
Sbjct: 325 IQCWGWNEDGQLG-------------DDSTTDAGAPVDVVGLASGVDEVSLGEEHSCARI 371
Query: 362 RDGRIHGWGYNSYGQAANEKSTYAWYPSPV----DWCVGEVRKLAAGGGHSAVLADACSL 417
DG I WG N+ GQ + P V D G + L AG HS + ++ +
Sbjct: 372 EDG-IQCWGNNNRGQLGDNTDDSRLTPVDVLQGGDVLAG-ISALGAGSTHSCAVTNSGGI 429
Query: 418 KELC----EF-RLAESVTLSNASEIEDVASRTGSEAL 449
LC +F +L + T+++ +E +G A+
Sbjct: 430 --LCWGGNDFGQLGDGSTVTSTVAVEHSTLTSGIAAV 464
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 147/357 (41%), Gaps = 60/357 (16%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ G +HT AV SDG + WG N GQLG+G+ P V L S+ V + G H
Sbjct: 56 FSAGEQHTCAVTSDGRVQCWGRNSSGQLGNGSTADSALPITVPGL-SDVVAVSASGFHTC 114
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAF-------TPNTI--------ICQ 171
A R G + WG N F+G +P+ + +
Sbjct: 115 A-----RTEAGAV-----LCWGNN--------FYGQLGDGTNDDSPSPVAVVGLESGVAA 156
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
+S G H AL++ G ++ WG N G +G G T + P + G +
Sbjct: 157 ISAGGSHTCALTDGGAVKCWGDNSAGAVGDG-TGDDRNSPVDVDGLTS---------GVA 206
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
+S G H+ A+++ G + WG GQLG S S P V L + V+ G
Sbjct: 207 AISSGGGHTCALTDAGGLKCWGWNFRGQLGDNSEIS---RSSPVDVAGLS-TGVTAVSSG 262
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVA 351
H+CAL +G + WG + QLG G T + SL+P ++D I
Sbjct: 263 AQHTCALLEEGGVQCWGRNAENQLGDG--TENGSLVPVDADGTEDAAGIHA--------- 311
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
G HT + DG I WG+N GQ ++ +T A P V V +++ G HS
Sbjct: 312 -GGFHTCITNADGGIQCWGWNEDGQLGDDSTTDAGAPVDVVGLASGVDEVSLGEEHS 367
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 150/385 (38%), Gaps = 61/385 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ I WG N GQ G G + + G A + G +HT A
Sbjct: 423 VTNSGGILCWGGNDFGQLG-DGSTVTSTVAVEHSTLTSGIAA--------VGAGEDHTCA 473
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ G + WG N GQLG+G P L S+ V S++ G + + +
Sbjct: 474 LTDGGGVKCWGRNSQGQLGNGKLVNSSEPVDALLL-SQGVSSLTTGGNHSCVL------- 525
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI----------ICQVSCGSVHVVALSECG 186
+ T + WG N +L G+ + +T+ + VS GS H A++ G
Sbjct: 526 --LDTGGIRCWGAN---GTGQLGNGSRSASTVAQSVTGLTSGVINVSAGSSHTCAVTSSG 580
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
++ WG+N YGQ+G G T + +D V G +H+ A+ ++
Sbjct: 581 AVKCWGWNFYGQVGDGST----------DFRTEPVDVVGLGAGAAAVVAGRWHTCAIMDD 630
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
G V WG GQLG + D P VV L + V G H+CALT +
Sbjct: 631 GRVKCWGYNVYGQLGD---GTEDDSPTPVDVVNLPSA-VTQVTVGDSHTCALTESDGILC 686
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRI 366
WG S +G+LG P D F ++ + GV +A G HT + G +
Sbjct: 687 WGLSSSGRLGGDP------------DPDFA--AVVGLGTGVTQIAGGDDHTCALIG-GNV 731
Query: 367 HGWGYNSYGQAANEKSTYAWYPSPV 391
WG N + Q + P+PV
Sbjct: 732 RCWGDNEFSQIGDGNVADRDEPAPV 756
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 104/249 (41%), Gaps = 30/249 (12%)
Query: 165 PNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
P T I S G H A++ G +Q WG N GQLG G T + +
Sbjct: 49 PLTDIATFSAGEQHTCAVTSDGRVQCWGRNSSGQLGNGSTAD-----------SALPITV 97
Query: 225 PELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF 284
P L + VS +H+ A +E G V WG GQLG + D P VV L+
Sbjct: 98 PGLSDVVAVSASGFHTCARTEAGAVLCWGNNFYGQLGD---GTNDDSPSPVAVVGLES-G 153
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-- 342
+ ++ GG H+CALT GA+ WG + AG +G G RN P+ V
Sbjct: 154 VAAISAGGSHTCALTDGGAVKCWGDNSAGAVGDGTGDD-------------RNSPVDVDG 200
Query: 343 VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLA 402
+ +GV ++ G HT G + WG+N GQ + P V V ++
Sbjct: 201 LTSGVAAISSGGGHTCALTDAGGLKCWGWNFRGQLGDNSEISRSSPVDVAGLSTGVTAVS 260
Query: 403 AGGGHSAVL 411
+G H+ L
Sbjct: 261 SGAQHTCAL 269
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 113/262 (43%), Gaps = 36/262 (13%)
Query: 212 RVIKGYAKFLDEAP----ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQS 267
R I G A +L A L I S GE H+ AV+ +G V WG S GQLG+ S
Sbjct: 32 RAIDG-APYLSPASVGVDPLTDIATFSAGEQHTCAVTSDGRVQCWGRNSSGQLGNGSTA- 89
Query: 268 GDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLI 327
LP V L + V+ G H+CA T GA+ WG + GQLG G S S
Sbjct: 90 --DSALPITVPGLSDVVA--VSASGFHTCARTEAGAVLCWGNNFYGQLGDGTNDDSPS-- 143
Query: 328 PNESDTYFRNIPILVV--PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYA 385
P+ VV +GV ++ G SHT G + WG NS G +
Sbjct: 144 -----------PVAVVGLESGVAAISAGGSHTCALTDGGAVKCWGDNSAGAVGDGTGDDR 192
Query: 386 WYPSPVDWCVGEVRKLAAGGGHSAVLADACSLKELC---EFR--LAESVTLSNASEIEDV 440
P VD V +++GGGH+ L DA LK C FR L ++ +S +S ++
Sbjct: 193 NSPVDVDGLTSGVAAISSGGGHTCALTDAGGLK--CWGWNFRGQLGDNSEISRSSPVDVA 250
Query: 441 ASRTGSEALA----RLCERLRE 458
TG A++ C L E
Sbjct: 251 GLSTGVTAVSSGAQHTCALLEE 272
>gi|119626423|gb|EAX06018.1| hect domain and RLD 6, isoform CRA_a [Homo sapiens]
Length = 385
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 123/242 (50%), Gaps = 19/242 (7%)
Query: 168 IICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL 227
I+ VSCG H +A+ G + AWG GQLG G E P+ I
Sbjct: 76 IVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDI------- 128
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
KI QVSCG YHS A+S++ +V++WG S GQLG + + P+RV +L+GI +
Sbjct: 129 -KIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQ 185
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN-G 346
VA GG HS AL+ G + WG + AGQL L + +P +S+ + + + + N G
Sbjct: 186 VAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRN-----VPVQSN---KPLSVGALKNLG 237
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGG 406
V ++CG +HT V +DG++ +G N GQ + P V+ G V ++ G
Sbjct: 238 VVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSY 297
Query: 407 HS 408
H+
Sbjct: 298 HT 299
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 159/365 (43%), Gaps = 55/365 (15%)
Query: 62 SRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC 121
+ L A G H+ + ++ + + G N GQLG + + PE ++ L++ V +SC
Sbjct: 23 AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSC 82
Query: 122 GAHCTAAIAEPRENDGTISTSRLWVW-----GQNQGSNFPRLFWGAFTPNTI-------I 169
G + A+ R++ W GQ F + +FTP I I
Sbjct: 83 GKEHSLAVCH---------KGRVFAWGAGSEGQLGIGEFKEI---SFTPKKIMTLNDIKI 130
Query: 170 CQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK 229
QVSCG H +ALS+ + +WG N +GQLG G P+ ++ L+ P
Sbjct: 131 IQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRS----LEGIP---- 182
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ QV+ G HS A+S G + WG S GQL + P V AL + + ++
Sbjct: 183 LAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYIS 242
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGV 347
CG H+ LT G ++ +G +++GQLG P T + P LV + V
Sbjct: 243 CGDAHTAVLTQDGKVFTFGDNRSGQLGYSP-------------TPEKRGPQLVERIDGLV 289
Query: 348 QLVACGHSHTLVYMR-DGRIHGWGYN-------SYGQAANEKSTYAWYPSPVDWCVGEVR 399
+ CG HTL Y+ G++ +G+ ++ +A E + S D+ +V+
Sbjct: 290 SQIDCGSYHTLAYVHTTGQVVSFGHGPSDTSKPTHPEALTENFDISCLISAEDFVDVQVK 349
Query: 400 KLAAG 404
+ AG
Sbjct: 350 HIFAG 354
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 142/316 (44%), Gaps = 62/316 (19%)
Query: 27 GYNHSGQTGRKGRER-QLRIPKQLPPELFGCPAGANSRWLD-IACGHEHTAAVASDGTLF 84
G N GQ GR+G +R +L P Q L +D ++CG EH+ AV G +F
Sbjct: 48 GDNSRGQLGRRGAQRGELPEPIQALETLI----------VDLVSCGKEHSLAVCHKGRVF 97
Query: 85 TWGANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSR 143
WGA GQLG G +E P+K+ L + +SCG + + A+++ S+
Sbjct: 98 AWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK---------DSQ 148
Query: 144 LWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQA 190
++ WG+N G FP +P + + QV+ G H ALS CG
Sbjct: 149 VFSWGKNSHGQLGLGKEFP----SQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFG 204
Query: 191 WGYNEYGQL---GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
WG N GQL GR + + + V G K L + +SCG+ H+A ++++G
Sbjct: 205 WGSNSAGQLALSGRNVPVQSNKPLSV--GALKNLG-------VVYISCGDAHTAVLTQDG 255
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
+V+T+G GQLG+ ++ P+ V +DG+ + + CG H+ A Y
Sbjct: 256 KVFTFGDNRSGQLGYSPT---PEKRGPQLVERIDGL-VSQIDCGSYHTLA-------YVH 304
Query: 308 GGSQAGQLGLGPQTRS 323
Q G GP S
Sbjct: 305 TTGQVVSFGHGPSDTS 320
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 95/186 (51%), Gaps = 14/186 (7%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
++ Q + GE HS + N V + G S GQLG Q G+ LP + AL+ + + V
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGE---LPEPIQALETLIVDLV 80
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
+CG HS A+ KG ++AWG GQLG+G + + S P + T +I I+
Sbjct: 81 SCGKEHSLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKIMT-LNDIKII------- 131
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGG 406
V+CGH H+L +D ++ WG NS+GQ K + P V G + ++AAGG
Sbjct: 132 QVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 191
Query: 407 HSAVLA 412
HS L+
Sbjct: 192 HSFALS 197
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 117/242 (48%), Gaps = 25/242 (10%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG GQ G + PK++ + + + ++CGH H+ A++
Sbjct: 93 KGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTL-------NDIKIIQVSCGHYHSLALSK 145
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISC-GAHCTA-AIAEPREND 136
D +F+WG N GQLG G E + P++V+ L+ + ++ GAH A ++
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW 205
Query: 137 GTISTSRLWVWGQN--QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
G+ S +L + G+N SN P L GA N + +SCG H L++ G + +G N
Sbjct: 206 GSNSAGQLALSGRNVPVQSNKP-LSVGALK-NLGVVYISCGDAHTAVLTQDGKVFTFGDN 263
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEVYTWG 253
GQLG T E +GP++++ ++Q+ CG YH+ A V G+V ++G
Sbjct: 264 RSGQLGYSPTPEK-RGPQLVERIDGL---------VSQIDCGSYHTLAYVHTTGQVVSFG 313
Query: 254 LG 255
G
Sbjct: 314 HG 315
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 58/144 (40%), Gaps = 12/144 (8%)
Query: 270 KELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPN 329
+EL RR G + A G HS L + + + G + GQLG R
Sbjct: 10 RELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQR------G 63
Query: 330 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ-AANEKSTYAWYP 388
E + + L+ V LV+CG H+L GR+ WG S GQ E ++ P
Sbjct: 64 ELPEPIQALETLI----VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTP 119
Query: 389 SPVDWCVGEVRKLAAGGGHSAVLA 412
+ + +++ + GH LA
Sbjct: 120 KKI-MTLNDIKIIQVSCGHYHSLA 142
>gi|356526924|ref|XP_003532065.1| PREDICTED: uncharacterized protein LOC100797527 [Glycine max]
Length = 1099
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 149/336 (44%), Gaps = 60/336 (17%)
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
+IACG EH A V G +F+WG G+LG G + HP+ ++ L + ++ ++CG +
Sbjct: 309 NIACGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSDVPHPKLIESLSNTNIELVACGEYH 368
Query: 126 TAAIAEPRENDGTISTSRLWVWGQ-----------NQGSNF-PRLFWGAFTPNTIICQVS 173
T A+ T+S L+ WG NQ S++ P+ G + +S
Sbjct: 369 TCAV--------TLSGD-LYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLE-GIHVSSIS 418
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
CG H ++ G L +G +G LG G + + PR I+ + Q
Sbjct: 419 CGPWHTAVVTSSGQLFTFGDGTFGVLGHGDR-KSVSLPREIESLKGL--------RTVQA 469
Query: 234 SCGEYHSAAVSE------------NGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVA 279
+CG +H+AAV E +G+++TWG G G+LGH GDKE L+P RVV
Sbjct: 470 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGH-----GDKESKLVPTRVVT 524
Query: 280 LDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIP 339
LD VACG + AL+ G +Y G G LG T++ +P +
Sbjct: 525 LDEPNFCQVACGHSMTVALSRLGHVYTMGSCVYGHLG---NTQADGKLPTPVEGKLSK-- 579
Query: 340 ILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
+ V+ +ACG H V + WG + G
Sbjct: 580 -----SFVEEIACGAYHVAVLTSRTEVFTWGKGANG 610
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 81/160 (50%), Gaps = 17/160 (10%)
Query: 219 KFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL-PRRV 277
K L+ A L+ + ++CG H+A V++ GEV++WG S G+LGH D ++ P+ +
Sbjct: 297 KALESAVVLD-VQNIACGGEHAAMVTKQGEVFSWGGESGGRLGH----GVDSDVPHPKLI 351
Query: 278 VALDGIFIKDVACGGVHSCALTSKGALYAWGGS--QAGQLGLGPQTRSFSLIPNESDTYF 335
+L I+ VACG H+CA+T G LY WG G LG G Q + +P +
Sbjct: 352 ESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHW--VPKRVNGPL 409
Query: 336 RNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
I V ++CG HT V G++ +G ++G
Sbjct: 410 EGI-------HVSSISCGPWHTAVVTSSGQLFTFGDGTFG 442
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 16/151 (10%)
Query: 272 LLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNES 331
LLP+ + + + ++++ACGG H+ +T +G +++WGG G+LG G +S
Sbjct: 294 LLPKALESAVVLDVQNIACGGEHAAMVTKQGEVFSWGGESGGRLGHGV----------DS 343
Query: 332 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWG---YNSYGQAANEKSTYAWYP 388
D + + ++LVACG HT G ++ WG YN YG + W P
Sbjct: 344 DVPHPKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYN-YGLLGHGNQVSHWVP 402
Query: 389 SPVDWCVG--EVRKLAAGGGHSAVLADACSL 417
V+ + V ++ G H+AV+ + L
Sbjct: 403 KRVNGPLEGIHVSSISCGPWHTAVVTSSGQL 433
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 30/197 (15%)
Query: 63 RWLDIACGHEHTAAVA------------SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQ 110
R + ACG HTAAV S G LFTWG + G+LG G +E + P +V
Sbjct: 465 RTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTRVVT 524
Query: 111 LQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQ----NQGSNFPRLFWGAFTPN 166
L ++CG T A++ G + T V+G P G +
Sbjct: 525 LDEPNFCQVACGHSMTVALSRL----GHVYTMGSCVYGHLGNTQADGKLPTPVEGKLS-K 579
Query: 167 TIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPE 226
+ + +++CG+ HV L+ + WG G LG G T + P ++ EA +
Sbjct: 580 SFVEEIACGAYHVAVLTSRTEVFTWGKGANGCLGHGDTND-RNTPTLV--------EALK 630
Query: 227 LEKITQVSCGEYHSAAV 243
+++ ++CG +AA+
Sbjct: 631 DKQVKSIACGTNFTAAI 647
>gi|327286813|ref|XP_003228124.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1-like [Anolis carolinensis]
Length = 4963
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 173/382 (45%), Gaps = 79/382 (20%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI--- 139
+F WGA GQL + P Q++ + CG +CT I + +GT+
Sbjct: 4090 VFLWGAGRHGQLAEAGRNAVSPPPSPSFCQAQ---QVICGQNCTFVI----QANGTVLAC 4142
Query: 140 ---STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQV--SCGSV-HVVALSECGLLQAWGY 193
S RL GQ + L + ++ Q+ SCGS H +AL+E G + +WG
Sbjct: 4143 GEGSYGRL---GQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4199
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
+YG+LG G + + PR I EA + E++ Q+SCG HSA V+ +G+++T+G
Sbjct: 4200 GDYGKLGHG-NSDRQRRPRQI--------EALQGEEVVQMSCGFKHSAVVTADGKLFTFG 4250
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL-YAWGGSQA 312
G G+LG L + + LP RV AL+G I +VACG H+ +++ G++ +A+G
Sbjct: 4251 NGDYGRLG---LGNTSNKKLPERVAALEGYQIGEVACGLNHTLVVSTDGSMVWAFGDGDY 4307
Query: 313 GQLGLGPQTRSFSLIPNESDTY--------------------------FRNIPILVVPNG 346
G+LGLG T S P + D F ++ +P G
Sbjct: 4308 GKLGLGNSTAKSS--PQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4365
Query: 347 ------------------VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYP 388
V+ +A G HTL G ++ WG NS GQ + + P
Sbjct: 4366 RARNHNRPQQVPALSGVFVEDIAVGAEHTLALSASGDVYAWGSNSEGQLGLGHTNHVREP 4425
Query: 389 SPVDWCVGE-VRKLAAGGGHSA 409
+ V G+ VR+++AG HSA
Sbjct: 4426 TLVTSLQGKSVRQISAGRCHSA 4447
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 182/405 (44%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ PK P + S I G T +++DG+
Sbjct: 376 VYVWGSNSSHQLVEGTQEKILQ-PKLAP---------SFSDAQTIEAGQYCTFVISTDGS 425
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG----T 138
+ G +G+LG G + +K+L E +SI ++ + +DG
Sbjct: 426 VRACGKGSYGRLGLGDSNNQS---TLKKLTFEPHRSIK-------KVSSSKGSDGHTLAF 475
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ ++ WG + +P+L G ++C VS G H A++E G L
Sbjct: 476 TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGEL 534
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G + P ++K ++ + +VSCG H+ A+S++G
Sbjct: 535 YTWGEGDFGRLGHGDS-NSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 583
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ + AL G+FI+ V G S ALTS G +Y
Sbjct: 584 TVWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVY 638
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V ++ G SH L D
Sbjct: 639 AWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-ISIGDSHCLALSHDNE 687
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 688 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHS 732
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 134/262 (51%), Gaps = 27/262 (10%)
Query: 65 LDIACGHE-HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA 123
L +CG + H+ A+ G +F+WG ++G+LG G + ++ P +++ LQ E V +SCG
Sbjct: 4175 LVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGF 4234
Query: 124 HCTAAIAEPRENDGTIST------SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSV 177
+A + DG + T RL + G P A I +V+CG
Sbjct: 4235 KHSAVVTA----DGKLFTFGNGDYGRLGL-GNTSNKKLPERV--AALEGYQIGEVACGLN 4287
Query: 178 HVVALSECG-LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG 236
H + +S G ++ A+G +YG+LG G P+ + I +V+CG
Sbjct: 4288 HTLVVSTDGSMVWAFGDGDYGKLGLG-NSTAKSSPQKVDILCGI--------GIKKVACG 4338
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSC 296
S A++++G VYT+G + L ++ ++ P++V AL G+F++D+A G H+
Sbjct: 4339 TQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNR---PQQVPALSGVFVEDIAVGAEHTL 4395
Query: 297 ALTSKGALYAWGGSQAGQLGLG 318
AL++ G +YAWG + GQLGLG
Sbjct: 4396 ALSASGDVYAWGSNSEGQLGLG 4417
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 143/307 (46%), Gaps = 43/307 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V +DG
Sbjct: 4194 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTADGK 4245
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T ++ DG++
Sbjct: 4246 LFTFGNGDYGRLGLGNTSNKKLPERVAALEGYQIGEVACGLNHTLVVS----TDGSM--- 4298
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNT------IIC-----QVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T + I+C +V+CG+ VAL++ G + +
Sbjct: 4299 -VWAFGDG---DYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTF 4354
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ + + + ++ G H+ A+S +G+VY
Sbjct: 4355 GQDRLIGLPEG-RARNHNRPQQVPALSGVF--------VEDIAVGAEHTLALSASGDVYA 4405
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWGGS 310
WG S GQLG L + P V +L G ++ ++ G HS A +S A G S
Sbjct: 4406 WGSNSEGQLG---LGHTNHVREPTLVTSLQGKSVRQISAGRCHSAAWSSPPVPPRAPGVS 4462
Query: 311 QAGQLGL 317
QLGL
Sbjct: 4463 VPLQLGL 4469
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV DG
Sbjct: 481 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVTEDGE 533
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 534 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 584
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P I I +V GS +AL+ G + AW
Sbjct: 585 -VWSFG---GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 640
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I +S G+ H A+S + EVY
Sbjct: 641 GCG--ACLGCGSSEATALRPKLIEELAA--------TRIVDISIGDSHCLALSHDNEVYA 690
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDG+ I+ ++ G HS A T+
Sbjct: 691 WGNNSMGQCGQGN--STGPITKPKKVSGLDGVAIQQISAGTSHSLAWTA 737
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 90/198 (45%), Gaps = 17/198 (8%)
Query: 224 APELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
+P + QV CG+ + + NG V G GS G+LG + S D +L + AL G
Sbjct: 4114 SPSFCQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVL-TVISALQGF 4170
Query: 284 FIKDV--ACGGV-HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI 340
+ + +CG HS ALT G +++WG G+LG G R R I
Sbjct: 4171 VVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDR---------QRRPRQIEA 4221
Query: 341 LVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVR 399
L VQ+ +CG H+ V DG++ +G YG+ ++ P V G ++
Sbjct: 4222 LQGEEVVQM-SCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVAALEGYQIG 4280
Query: 400 KLAAGGGHSAVLADACSL 417
++A G H+ V++ S+
Sbjct: 4281 EVACGLNHTLVVSTDGSM 4298
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 77/176 (43%), Gaps = 14/176 (7%)
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT 299
+ VSE EVY WG S Q L G +E + + +A + + G + ++
Sbjct: 367 APVVSETCEVYVWGSNSSHQ-----LVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVIS 421
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
+ G++ A G G+LGLG +L + + R+I + G HTL
Sbjct: 422 TDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RSIKKVSSSKG------SDGHTLA 474
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+ +G + WG YG+ + S+ YP + + G+V ++AG HSA + +
Sbjct: 475 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 530
>gi|321470134|gb|EFX81111.1| hypothetical protein DAPPUDRAFT_50378 [Daphnia pulex]
Length = 4502
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 109/413 (26%), Positives = 175/413 (42%), Gaps = 103/413 (24%)
Query: 12 RPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPK------QLPP-------------- 51
+P+ ++ +YVWG N Q G + ++++P+ L P
Sbjct: 2689 QPISSVSGAKRVYVWGLNDKEQLGGP-KGSKIKVPQAVDWTVSLQPISVAGGSKSLFLVT 2747
Query: 52 ---ELFGCPAGANSRW------------------------LDIACGHEHTAAVASDGTLF 84
+ + C G+N R + + G H A+ +DG +F
Sbjct: 2748 QSGKAYACGEGSNGRLGLGHSRNVNSPHQITALSQHVVRKVAVHSGGRHALALTADGRVF 2807
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRL 144
+WG + G+LG G P ++ L V+ ++ G++ +AA+ S+ L
Sbjct: 2808 SWGEGDDGKLGHGDVTSLDTPRCIEALNGFRVRDVAAGSNHSAAVT---------SSGEL 2858
Query: 145 WVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGS--VHVVALSECGLLQ 189
+ WG + G N +L TP + + QVSCGS +AL E GL+
Sbjct: 2859 YTWGLGEYGRLGHGDNLTQL-----TPKRVESLVGQRVVQVSCGSRDAQTLALVEGGLVY 2913
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
+WG ++G+LGRG EG P ++ + + V CG S A++ NG V
Sbjct: 2914 SWGDGDFGKLGRG-GSEGCSSPCLVDKLSGL--------GVCHVECGAQFSVALTCNGHV 2964
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
YTWG G +LGH S Q P V L G + V+ G +H A+T G ++AWG
Sbjct: 2965 YTWGKGDYFRLGHGSDQHVR---WPTLVEGLRGKKVIGVSVGALHCLAVTDAGQVFAWGD 3021
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVY 360
+ GQ G G S+ N T + I +G+++ VACG SH++ +
Sbjct: 3022 NDHGQQGNG------SITVNRRPTLVQGI------DGIKITRVACGSSHSVAW 3062
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 143/326 (43%), Gaps = 43/326 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G+ G +L + P + G + +D+ACG H+AA+ + G
Sbjct: 3722 VYSWG---EGEDGKLGHGNKLPCDR---PRIIESLRGKDV--VDVACGGAHSAAITALGE 3773
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG G + + P+ V+ L V ++CG+ A E GT+
Sbjct: 3774 LYTWGKGRYGRLGHGDSDDQLKPKLVEALLGYRVMDVACGSGDAQTCAITDEEGGTV--- 3830
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I I +V CGS VALS G + WG
Sbjct: 3831 --WSWGDGDYGKLGRGGSDGCKIPTKIESLSGLGIIKVECGSQFSVALSNNGSVYTWGKG 3888
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G+ E ++ P+ + + +K+ +S G H ++ GEVYTWG
Sbjct: 3889 DYHRLGHGVD-EHVRRPKKVMTL--------QGKKVISISTGALHCVVCTDQGEVYTWGD 3939
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + K PR V AL I V+CG H+ AW +
Sbjct: 3940 NDEGQLGDGTTTGIQK---PRLVAALQNKKINRVSCGSAHTV---------AWSTCKGCS 3987
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPI 340
+ +R + IP + D ++IPI
Sbjct: 3988 TPVAGSSRLPTSIPLQYD-LLKDIPI 4012
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 189/432 (43%), Gaps = 68/432 (15%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P C A + R + +A G + A+ SDG
Sbjct: 3616 IYGWGHNHRGQLG--GVEGAKVKVPTV-------CEALSALRPIQLAGGEQTLFAITSDG 3666
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
++ G G+LG G E P ++ LQ FVK ++ G HC A +E
Sbjct: 3667 RVYATGYGAGGRLGIGGAESVTVPSLLESLQHVFVKKVAVNSGGKHCLALSSE------- 3719
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG+ + PR+ + + V+CG H A++ G L
Sbjct: 3720 ---GEVYSWGEGEDGKLGHGNKLPCDRPRIIESLRGKDVV--DVACGGAHSAAITALGEL 3774
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVS-- 244
WG YG+LG G + + L+ P++++ + ++ V+C G+ + A++
Sbjct: 3775 YTWGKGRYGRLGHGDSDDQLK-PKLVEALLGY--------RVMDVACGSGDAQTCAITDE 3825
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
E G V++WG G G+LG D +P ++ +L G+ I V CG S AL++ G++
Sbjct: 3826 EGGTVWSWGDGDYGKLGR---GGSDGCKIPTKIESLSGLGIIKVECGSQFSVALSNNGSV 3882
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVAC--GHSHTLVYMR 362
Y WG +LG G D + R ++ G ++++ G H +V
Sbjct: 3883 YTWGKGDYHRLGHG------------VDEHVRRPKKVMTLQGKKVISISTGALHCVVCTD 3930
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLA--DACSLKE 419
G ++ WG N GQ + +T P V ++ +++ G H+ + CS
Sbjct: 3931 QGEVYTWGDNDEGQLGDGTTTGIQKPRLVAALQNKKINRVSCGSAHTVAWSTCKGCSTPV 3990
Query: 420 LCEFRLAESVTL 431
RL S+ L
Sbjct: 3991 AGSSRLPTSIPL 4002
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 148/345 (42%), Gaps = 40/345 (11%)
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G ++ WG N GQLG K P + L + ++ G AI +DG +
Sbjct: 3614 GQIYGWGHNHRGQLGGVEGAKVKVPTVCEALSALRPIQLAGGEQTLFAIT----SDGRVY 3669
Query: 141 TS-----RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNE 195
+ G + P L V+ G H +ALS G + +WG E
Sbjct: 3670 ATGYGAGGRLGIGGAESVTVPSLLESLQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEGE 3729
Query: 196 YGQLGRG--ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
G+LG G + C+ PR+I E+ + + V+CG HSAA++ GE+YTWG
Sbjct: 3730 DGKLGHGNKLPCD---RPRII--------ESLRGKDVVDVACGGAHSAAITALGELYTWG 3778
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSK--GALYAWGG 309
G G+LGH D +L P+ V AL G + DVACG +CA+T + G +++WG
Sbjct: 3779 KGRYGRLGH---GDSDDQLKPKLVEALLGYRVMDVACGSGDAQTCAITDEEGGTVWSWGD 3835
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGW 369
G+LG G IP + ++ + G+ V CG ++ +G ++ W
Sbjct: 3836 GDYGKLGRG--GSDGCKIPTKIES--------LSGLGIIKVECGSQFSVALSNNGSVYTW 3885
Query: 370 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
G Y + + + P V G +V ++ G H V D
Sbjct: 3886 GKGDYHRLGHGVDEHVRRPKKVMTLQGKKVISISTGALHCVVCTD 3930
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 115/244 (47%), Gaps = 30/244 (12%)
Query: 143 RLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
R++VWG N +GS +T + V+ GS + +++ G A G
Sbjct: 2699 RVYVWGLNDKEQLGGPKGSKIKVPQAVDWTVSLQPISVAGGSKSLFLVTQSGKAYACGEG 2758
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
G+LG G + + P I ++ + + K+ V G H+ A++ +G V++WG
Sbjct: 2759 SNGRLGLGHS-RNVNSPHQITALSQHV-----VRKVA-VHSGGRHALALTADGRVFSWGE 2811
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
G G+LGH + S D PR + AL+G ++DVA G HS A+TS G LY WG + G+
Sbjct: 2812 GDDGKLGHGDVTSLDT---PRCIEALNGFRVRDVAAGSNHSAAVTSSGELYTWGLGEYGR 2868
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRDGRIHGWGYN 372
LG G L P ++ +V V V+CG + TL + G ++ WG
Sbjct: 2869 LGHGDNLT--QLTPKRVES--------LVGQRVVQVSCGSRDAQTLALVEGGLVYSWGDG 2918
Query: 373 SYGQ 376
+G+
Sbjct: 2919 DFGK 2922
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 105/226 (46%), Gaps = 25/226 (11%)
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
WG N+ QLG G +G ++ + +D L+ I+ V+ G V+++G+
Sbjct: 2702 VWGLNDKEQLG------GPKGSKI--KVPQAVDWTVSLQPIS-VAGGSKSLFLVTQSGKA 2752
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAW 307
Y G GS G+LG ++ + P ++ AL ++ VA GG H+ ALT+ G +++W
Sbjct: 2753 YACGEGSNGRLGLGHSRNVNS---PHQITALSQHVVRKVAVHSGGRHALALTADGRVFSW 2809
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G T + E+ FR V+ VA G +H+ G ++
Sbjct: 2810 GEGDDGKLGHGDVTSLDTPRCIEALNGFR----------VRDVAAGSNHSAAVTSSGELY 2859
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
WG YG+ + + P V+ VG+ V +++ G + LA
Sbjct: 2860 TWGLGEYGRLGHGDNLTQLTPKRVESLVGQRVVQVSCGSRDAQTLA 2905
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 75/181 (41%), Gaps = 18/181 (9%)
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV---VALDGIFIKDVACGGVHSCA 297
++VS VY WGL QLG G K +P+ V V+L I VA G
Sbjct: 2692 SSVSGAKRVYVWGLNDKEQLGG---PKGSKIKVPQAVDWTVSLQPI---SVAGGSKSLFL 2745
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT 357
+T G YA G G+LGLG S P++ +++ V V G H
Sbjct: 2746 VTQSGKAYACGEGSNGRLGLGHSRNVNS--PHQITALSQHVVRKVA------VHSGGRHA 2797
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACS 416
L DGR+ WG G+ + T P ++ G VR +AAG HSA + +
Sbjct: 2798 LALTADGRVFSWGEGDDGKLGHGDVTSLDTPRCIEALNGFRVRDVAAGSNHSAAVTSSGE 2857
Query: 417 L 417
L
Sbjct: 2858 L 2858
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 8/110 (7%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG + G G ++ +R P L L G + + ++ G H AV G
Sbjct: 2964 VYTWGKGDYFRLGH-GSDQHVRWPT-LVEGLRG------KKVIGVSVGALHCLAVTDAGQ 3015
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
+F WG N+ GQ G+G+ + P V+ + + ++CG+ + A P
Sbjct: 3016 VFAWGDNDHGQQGNGSITVNRRPTLVQGIDGIKITRVACGSSHSVAWTAP 3065
>gi|301610125|ref|XP_002934599.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Xenopus
(Silurana) tropicalis]
Length = 4842
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 178/405 (43%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ P+L C + A + I G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQ------PKLAPCFSDAQT----IEAGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA----HCTAAIAEPRENDGT 138
+ G +G+LG G + +K+ +K +S H A E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE------- 476
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG + +P+L G ++C VS G H A++E G L
Sbjct: 477 ---GEVFSWGDGDYGKLGHGNSSTQKYPKLIQGTLQGKVVVC-VSAGYRHSAAVTEDGEL 532
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G + P ++K ++ + +VSCG H+ A+S++G
Sbjct: 533 YTWGEGDFGRLGHGDS-NSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 581
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ V AL G+F + V G S ALTS G +Y
Sbjct: 582 TVWSFGGGDNGKLGH-----GDTNRVYKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVY 636
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V ++ G SH L D
Sbjct: 637 AWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-ISIGDSHCLALSHDNE 685
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHS 730
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 118/449 (26%), Positives = 186/449 (41%), Gaps = 126/449 (28%)
Query: 10 TARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIA 68
T++P D ++ K +++WG GQ GR + IP AG+ S+ +
Sbjct: 3966 TSKPEDWHLGGKCDVFLWGAGRHGQLAEAGR--NVMIPSG---------AGSFSQAQQVI 4014
Query: 69 CGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI--SCGAHCT 126
CG T + ++GT+ G +G+LG G + + LQ V + SCG+
Sbjct: 4015 CGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGS--- 4071
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
DG H +AL+E G
Sbjct: 4072 ---------DG----------------------------------------HSMALTESG 4082
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ +WG +YG+LG G + + PR I EA + E++ Q+SCG HSA V+ +
Sbjct: 4083 EVFSWGDGDYGKLGHG-NSDRQRRPRQI--------EALQGEEVVQMSCGFKHSAVVTAD 4133
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL-Y 305
G+++T+G G G+LG L + + LP RV AL+G+ I VACG H+ A+++ G+L +
Sbjct: 4134 GKLFTFGNGDYGRLG---LGNTSNKKLPERVTALEGLHIGQVACGLNHTLAVSADGSLVW 4190
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTY--------------------------FRNIP 339
A+G G+LGLG T S P + D F
Sbjct: 4191 AFGDGDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4248
Query: 340 ILVVPNG------------------VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEK 381
++ +P G + +A G HTL G ++ WG NS GQ
Sbjct: 4249 LIGLPEGRARNHNRPQLVPVLLGIFIDDIAVGAEHTLALSASGEVYAWGSNSEGQLGLGH 4308
Query: 382 STYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
+ + P+ V G+ +R+++AG HSA
Sbjct: 4309 TNHVREPTLVTALQGKNIRQISAGRCHSA 4337
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 141/291 (48%), Gaps = 46/291 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V +DG
Sbjct: 4084 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTADGK 4135
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG++
Sbjct: 4136 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGLHIGQVACGLNHTLAVSA----DGSL--- 4188
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNT------IIC-----QVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T + ++C +V+CG+ VAL++ G + +
Sbjct: 4189 -VWAFGDG---DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4244
Query: 192 GYNEYGQL--GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
G + L GR Q V+ G F+D+ ++ G H+ A+S +GEV
Sbjct: 4245 GQDRLIGLPEGRARNHNRPQLVPVLLGI--FIDD---------IAVGAEHTLALSASGEV 4293
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
Y WG S GQLG L + P V AL G I+ ++ G HS A T+
Sbjct: 4294 YAWGSNSEGQLG---LGHTNHVREPTLVTALQGKNIRQISAGRCHSAAWTA 4341
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 141/311 (45%), Gaps = 48/311 (15%)
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAHCTAAIAE 131
HT A ++G +F+WG ++G+LG G +K+P+ ++ LQ + V +S G +AA+ E
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGTLQGKVVVCVSAGYRHSAAVTE 528
Query: 132 PRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI---------ICQVSCGSVHVVAL 182
DG L+ WG+ +F RL G I + +VSCGS H +AL
Sbjct: 529 ----DG-----ELYTWGEG---DFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIAL 576
Query: 183 SECG-LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
S+ G + ++G + G+LG G T + P+V++ +V G S
Sbjct: 577 SKDGRTVWSFGGGDNGKLGHGDT-NRVYKPKVVEALQGMFTR--------KVCAGSQSSL 627
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A++ G+VY WG G+ G S L P+ + L I D++ G H AL+
Sbjct: 628 ALTSTGQVYAWGCGACLGCG----SSEATALRPKLIEELAATRIVDISIGDSHCLALSHD 683
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
+YAWG + GQ G G T + S + +Q ++ G SH+L +
Sbjct: 684 NEVYAWGNNSMGQCGQGNSTGPITKPKKVSG---------LDGVAIQQISAGTSHSLAWT 734
Query: 362 ---RDGRIHGW 369
RD ++ W
Sbjct: 735 ALPRDRQVVAW 745
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 131/291 (45%), Gaps = 47/291 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGTLQG------KVVVCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNF----------PRL---FWGAFTPNTIICQVSCGSVHVVALSECGLLQ 189
+W +G P++ G FT +V GS +AL+ G +
Sbjct: 583 -VWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFTR-----KVCAGSQSSLALTSTGQVY 636
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
AWG LG G + P++I+ A +I +S G+ H A+S + EV
Sbjct: 637 AWGCG--ACLGCGSSEATALRPKLIEELAA--------TRIVDISIGDSHCLALSHDNEV 686
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
Y WG S+GQ G + S P++V LDG+ I+ ++ G HS A T+
Sbjct: 687 YAWGNNSMGQCGQGN--STGPITKPKKVSGLDGVAIQQISAGTSHSLAWTA 735
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 123/290 (42%), Gaps = 36/290 (12%)
Query: 134 ENDGTISTSRLWVWGQNQGSNF-----PRLFWGAFTPNTIICQ-VSCGSVHVVALSECGL 187
EN T ++VWG N ++ P Q + G +S G
Sbjct: 364 ENPVVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPCFSDAQTIEAGQYCTFVISTDGS 423
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPE--LEKITQVSCGEYHSAAVSE 245
++A G YG+LG G + + K L P ++K++ + H+ A +
Sbjct: 424 VRACGKGSYGRLGLGDSNN--------QSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 475
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHSCALTSKGAL 304
GEV++WG G G+LGH + + P+ + L G + V+ G HS A+T G L
Sbjct: 476 EGEVFSWGDGDYGKLGH---GNSSTQKYPKLIQGTLQGKVVVCVSAGYRHSAAVTEDGEL 532
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRD 363
Y WG G+LG G D+ RNIP LV + V V+CG SHT+ +D
Sbjct: 533 YTWGEGDFGRLGHG-------------DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKD 579
Query: 364 GR-IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 411
GR + +G G+ + + + P V+ G RK+ AG S L
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFTRKVCAGSQSSLAL 629
>gi|395541970|ref|XP_003772909.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC6 [Sarcophilus harrisii]
Length = 1032
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 174/420 (41%), Gaps = 87/420 (20%)
Query: 24 YVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGAN---SRWLDIACGHEHTAAVASD 80
Y WG N Q G R P + C GA+ + + ACG H+ + +D
Sbjct: 3 YCWGDNSFRQLGINAGRRA-------SPRVVRCREGASLGGQQIVQAACGERHSLLLLAD 55
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
GT+++ G N +GQLG + K P ++ L+++
Sbjct: 56 GTVWSCGNNSYGQLGRKNIKKSKRPAPIQALETQ-------------------------- 89
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLG 200
++ VSCG H +A+ + G + +WG GQLG
Sbjct: 90 ---------------------------VVVSVSCGKEHSLAICKTGRIYSWGSGSRGQLG 122
Query: 201 RGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQL 260
+ P+ I ++ +KI QVSCG YHS A++++G+V++WG GQL
Sbjct: 123 IKEVKDQCSIPKNIAALSR--------DKIIQVSCGHYHSIALTQDGKVFSWGDNDHGQL 174
Query: 261 GHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQ 320
G + + + P+RV +LDGI + VA GG HS AL+ G Y WG ++ GQL L +
Sbjct: 175 GLGT--NFPSQASPQRVNSLDGIPLAQVAAGGSHSFALSLSGTSYGWGRNKEGQLALSGK 232
Query: 321 TRSFSLI------PNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
S I E+ T R+ I +L+ + DG++ +G N+
Sbjct: 233 NASVVSINYCIWHEAEALTCKRSNSIKEFQGLKELLNRSRQ-----IADGKVLTFGSNNS 287
Query: 375 GQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADACSLKELCEFRLAESVTLSNA 434
GQ + T P V+ E+ A G H LA AC+ ++ F L+N+
Sbjct: 288 GQLGHGLITKPRGPQIVE--SAELFSQIACGSHHT-LAYACTSGQVLSFGCGSQRHLTNS 344
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 142/316 (44%), Gaps = 54/316 (17%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
IY WG GQ G K + Q IPK + A + + + ++CGH H+ A+ DG
Sbjct: 110 IYSWGSGSRGQLGIKEVKDQCSIPKNI-------AALSRDKIIQVSCGHYHSIALTQDGK 162
Query: 83 LFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP-------RE 134
+F+WG N+ GQLG GT + P++V L + ++ G + A++ R
Sbjct: 163 VFSWGDNDHGQLGLGTNFPSQASPQRVNSLDGIPLAQVAAGGSHSFALSLSGTSYGWGRN 222
Query: 135 NDGTISTSRLWVWGQNQG-SNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC-------- 185
+G ++ S G+N + W + C+ S L E
Sbjct: 223 KEGQLALS-----GKNASVVSINYCIWHE--AEALTCKRSNSIKEFQGLKELLNRSRQIA 275
Query: 186 -GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G + +G N GQLG G+ + +GP+++ E+ EL +Q++CG +H+ A +
Sbjct: 276 DGKVLTFGSNNSGQLGHGLITKP-RGPQIV--------ESAEL--FSQIACGSHHTLAYA 324
Query: 245 -ENGEVYTWGLGSVGQLGHCSLQSGDKEL---LPRRVVALD--GIFIKDVACGG----VH 294
+G+V ++G GS L + SLQ G E + + + D G+ +KD+ G V
Sbjct: 325 CTSGQVLSFGCGSQRHLTN-SLQQGSLEQNFNISNLISSNDFTGVRVKDIFAGANSNFVT 383
Query: 295 SCALTSKGALYAWGGS 310
+ L +LYA G S
Sbjct: 384 TIQLEDASSLYATGRS 399
>gi|387541132|gb|AFJ71193.1| RCC1 and BTB domain-containing protein 2 [Macaca mulatta]
Length = 551
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 113/227 (49%), Gaps = 22/227 (9%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H+V + G + WG+N Y QLG G T GL ++ + +++ +V+CG
Sbjct: 110 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSN--------KQVIEVACGS 161
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHSC 296
YHS ++ +GEV+ WG + GQ+G S + + +PRRV L + +ACG +
Sbjct: 162 YHSLVLTSDGEVFAWGYNNSGQVGSGSTVN---QPIPRRVTGCLQNKVVVTIACGQMCCM 218
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G +Y WG + GQLGLG + + R VQ VACG++H
Sbjct: 219 AVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR----------VQRVACGYAH 268
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 403
TLV +G+++ WG NSYGQ + YP+PV + ++AA
Sbjct: 269 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTMEKDRIIEIAA 315
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 135/303 (44%), Gaps = 49/303 (16%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTAAIAEPRENDGTIS 140
+F G N G LG G + P ++ L + + S+S G+ H A E
Sbjct: 67 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTE--------- 117
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVS------------CGSVHVVALSECGLL 188
++ WG N + +L G + CQ+S CGS H + L+ G +
Sbjct: 118 -GEVFTWGHNA---YSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEV 173
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
AWGYN GQ+G G T PR + G + + + ++CG+ AV + GE
Sbjct: 174 FAWGYNNSGQVGSGSTVNQ-PIPRRVTG-------CLQNKVVVTIACGQMCCMAVVDTGE 225
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
VY WG GQLG L S + P RV AL GI ++ VACG H+ LT +G +YAWG
Sbjct: 226 VYVWGYNGNGQLG---LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRIH 367
+ GQLG G N+S+ + + +++ AC +HT + G ++
Sbjct: 283 ANSYGQLGTG----------NKSNQSYPTPVTMEKDRIIEIAACHSTHTSAAKTQGGHVY 332
Query: 368 GWG 370
WG
Sbjct: 333 MWG 335
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 114/243 (46%), Gaps = 39/243 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G +P Q+ L +N + +++ACG H+ + SDG
Sbjct: 120 VFTWGHNAYSQLG-NGTTNHGLVPCQISTNL------SNKQVIEVACGSYHSLVLTSDGE 172
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P +V LQ++ V +I+CG C A+ + T
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAV---------VDT 223
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N N P A + +V+CG H + L++ G + AWG
Sbjct: 224 GEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 283
Query: 194 NEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G + + P + E ++I ++ +C H SAA ++ G VY
Sbjct: 284 NSYGQLGTGNKSNQSYPTPVTM-----------EKDRIIEIAACHSTHTSAAKTQGGHVY 332
Query: 251 TWG 253
WG
Sbjct: 333 MWG 335
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 18/150 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G Q P A R +ACG+ HT + +G
Sbjct: 226 VYVWGYNGNGQLGLGSSGNQ--------PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 277
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WGAN +GQLG G + + +P V + ++ +C + T+A
Sbjct: 278 VYAWGANSYGQLGTGNKSNQSYPTPVTMEKDRIIEIAACHSTHTSA--------AKTQGG 329
Query: 143 RLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 330 HVYMWGQCRGQSVILPHLTHFSCTDDVFAC 359
>gi|344293366|ref|XP_003418394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Loxodonta
africana]
Length = 4858
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 114/382 (29%), Positives = 172/382 (45%), Gaps = 79/382 (20%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI--- 139
++ WGA GQL E GR + + CG +CT I + +GT+
Sbjct: 3996 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVI----QANGTVLAC 4048
Query: 140 ---STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQV--SCGSV-HVVALSECGLLQAWGY 193
S RL GQ + L + ++ Q+ SCGS H +AL+E G + +WG
Sbjct: 4049 GEGSYGRL---GQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4105
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
+YG+LG G + + PR I EA + E++ Q+SCG HSA V+ +G+++T+G
Sbjct: 4106 GDYGKLGHG-NSDRQRRPRQI--------EALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4156
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL-YAWGGSQA 312
G G+LG L + + LP RV AL+G I VACG H+ A++S G++ +A+G
Sbjct: 4157 NGDYGRLG---LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSSDGSMVWAFGDGDY 4213
Query: 313 GQLGLGPQTRSFSLIPNESDTY--------------------------FRNIPILVVPNG 346
G+LGLG T S P + D F ++ +P G
Sbjct: 4214 GKLGLGNSTAKSS--PQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4271
Query: 347 ------------------VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYP 388
++ VA G HTL G ++ WG NS GQ + + P
Sbjct: 4272 RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREP 4331
Query: 389 SPVDWCVGE-VRKLAAGGGHSA 409
+ V G+ VR+++AG HSA
Sbjct: 4332 TLVTVLQGKNVRQISAGRCHSA 4353
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 186/405 (45%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ P+L P+ ++++ I G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQ------PKL--APSFSDAQ--TIEAGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG----T 138
+ G +G+LG G + +K+L E +SI ++ + +DG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQS---TLKKLTFEPHRSIR-------KVSSSKGSDGHTLAF 473
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ ++ WG + +P+L G ++C VS G H A++E G L
Sbjct: 474 TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGEL 532
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G + P ++K ++ + +VSCG H+ A+S++G
Sbjct: 533 YTWGEGDFGRLGHGDS-NSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 581
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ + AL G+FI+ V G S ALTS G +Y
Sbjct: 582 TVWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVY 636
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V ++ G SH L D
Sbjct: 637 AWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-ISIGDSHCLALSHDNE 685
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 168/379 (44%), Gaps = 89/379 (23%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPP-------- 51
MD + T+RP D ++ K +Y+WG GQ GR + +P P
Sbjct: 3973 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMVPAAAPSFSQAQQVI 4030
Query: 52 -------------ELFGCPAGANSRW------------------------LDIACGHE-H 73
+ C G+ R L +CG + H
Sbjct: 4031 CGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGH 4090
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
+ A+ G +F+WG ++G+LG G + ++ P +++ LQ E V +SCG +A +
Sbjct: 4091 SMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT--- 4147
Query: 134 ENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-----------ICQVSCGSVHVVAL 182
+DG +L+ +G ++ RL G + + I QV+CG H +A+
Sbjct: 4148 -SDG-----KLFTFGNG---DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV 4198
Query: 183 SECG-LLQAWGYNEYGQLGRGITC--EGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
S G ++ A+G +YG+LG G + Q V+ G I +V+CG
Sbjct: 4199 SSDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-----------IKKVACGTQF 4247
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT 299
S A++++G VYT+G + L ++ ++ P+++ L G+ I+DVA G H+ AL
Sbjct: 4248 SVALTKDGHVYTFGQDRLIGLPEGRARNHNR---PQQIPVLAGVVIEDVAVGAEHTLALA 4304
Query: 300 SKGALYAWGGSQAGQLGLG 318
S G +YAWG + GQLGLG
Sbjct: 4305 STGDVYAWGSNSEGQLGLG 4323
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 144/307 (46%), Gaps = 43/307 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V SDG
Sbjct: 4100 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTSDGK 4151
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ +DG++
Sbjct: 4152 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS----SDGSM--- 4204
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNT------IIC-----QVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T + ++C +V+CG+ VAL++ G + +
Sbjct: 4205 -VWAFGDG---DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4260
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ I A + I V+ G H+ A++ G+VY
Sbjct: 4261 GQDRLIGLPEG-RARNHNRPQQIPVLAGVV--------IEDVAVGAEHTLALASTGDVYA 4311
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWGGS 310
WG S GQLG L + P V L G ++ ++ G HS A T+ A G S
Sbjct: 4312 WGSNSEGQLG---LGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVS 4368
Query: 311 QAGQLGL 317
QLGL
Sbjct: 4369 VPLQLGL 4375
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P I I +V GS +AL+ G + AW
Sbjct: 583 -VWSFG---GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I +S G+ H A+S + EVY
Sbjct: 639 GCG--ACLGCGSSEATALRPKLIEELAA--------TRIVDISIGDSHCLALSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDGI I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 99/231 (42%), Gaps = 29/231 (12%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +GQL G V+ A AP + QV CG+ + + NG V
Sbjct: 3999 WGAGRHGQLAEA-------GRNVMVPAA-----APSFSQAQQVICGQNCTFVIQANGTVL 4046
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGALYAW 307
G GS G+LG + S D +L + AL G + + +CG HS ALT G +++W
Sbjct: 4047 ACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSW 4103
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G R R I L VQ+ +CG H+ V DG++
Sbjct: 4104 GDGDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLF 4153
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
+G YG+ ++ P V G ++ ++A G H+ ++ S+
Sbjct: 4154 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSSDGSM 4204
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VSE EVY WG S QL G +E + + +A + + G + +++ G
Sbjct: 368 VSETCEVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ A G G+LGLG +L + + R+I + G HTL +
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RSIRKVSSSKG------SDGHTLAFTT 475
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+G + WG YG+ + S+ YP + + G+V ++AG HSA + +
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
>gi|297603248|ref|NP_001053665.2| Os04g0583700 [Oryza sativa Japonica Group]
gi|255675724|dbj|BAF15579.2| Os04g0583700 [Oryza sativa Japonica Group]
Length = 1065
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 170/374 (45%), Gaps = 59/374 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLD---IACGHEHTAAVAS 79
+++WG G + IPK LP L G +++ LD IACG H A +
Sbjct: 232 VFLWGSVLGSMLGSED------IPKSLP-RLVG-----SAKMLDVQSIACGENHAAIITK 279
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE----N 135
G ++TWG+ G+L P+ V+ L S VK+++ G+ T AI E
Sbjct: 280 QGEVYTWGSYSSGRLDQKVNVNASCPKMVESLASVHVKAVAFGSKHTCAITVSGELFEWG 339
Query: 136 DGTISTSRLWVW-GQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
+G S + W G+NQ FP F G N + +++CG H ++ G L +G
Sbjct: 340 EGAHSLGLMNDWYGRNQW--FPHKFLGPMD-NISVSKIACGEWHTAIITSSGQLFTYGDG 396
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE--------- 245
+G LG G T +G+ P+ + E+ + ++ V+CG +H+AA+ E
Sbjct: 397 TFGVLGHGDT-QGVARPKEV--------ESLKGSRVKSVACGPWHTAAIVEVMSSFKGNA 447
Query: 246 -NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
+G+++TWG G+LGH + +LLP V +L + V+CG + LT G +
Sbjct: 448 PSGKLFTWGDADRGKLGHADRK---MKLLPTCVDSLTAYDLIQVSCGTAVTVVLTVTGMV 504
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNES--DTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
+ G S+ GQLG P+ S+ E T F V+ ++ G SH V
Sbjct: 505 FTIGSSRHGQLG-NPKADGESICSVEGPLKTEF-----------VREISSGSSHVAVLTM 552
Query: 363 DGRIHGWGYNSYGQ 376
G++ WG + GQ
Sbjct: 553 SGKVFTWGKGAEGQ 566
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 120/246 (48%), Gaps = 31/246 (12%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
IACG HTA + S G LFT+G FG LG G +G P++V+ L+ VKS++CG T
Sbjct: 374 IACGEWHTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESLKGSRVKSVACGPWHT 433
Query: 127 AAIAEPREN-DGTISTSRLWVWGQ---------NQGSNFPRLFWGAFTPNTIICQVSCGS 176
AAI E + G + +L+ WG ++ + T +I QVSCG+
Sbjct: 434 AAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSLTAYDLI-QVSCGT 492
Query: 177 VHVVALSECGLLQAWGYNEYGQLGR----GITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
V L+ G++ G + +GQLG G + ++GP + E + +
Sbjct: 493 AVTVVLTVTGMVFTIGSSRHGQLGNPKADGESICSVEGPL-------------KTEFVRE 539
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
+S G H A ++ +G+V+TWG G+ GQLG L P V AL+G ++ V CG
Sbjct: 540 ISSGSSHVAVLTMSGKVFTWGKGAEGQLG---LGDYSNRSSPTLVEALEGRDVESVVCGF 596
Query: 293 VHSCAL 298
+ A+
Sbjct: 597 NFTAAI 602
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 35/215 (16%)
Query: 211 PRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK 270
PR++ G AK LD + ++CGE H+A +++ GEVYTWG S G+L +
Sbjct: 253 PRLV-GSAKMLD-------VQSIACGENHAAIITKQGEVYTWGSYSSGRLDQ---KVNVN 301
Query: 271 ELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNE 330
P+ V +L + +K VA G H+CA+T G L+ WG A LGL
Sbjct: 302 ASCPKMVESLASVHVKAVAFGSKHTCAITVSGELFEWGEG-AHSLGL------------M 348
Query: 331 SDTYFRNI--------PILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKS 382
+D Y RN P+ + V +ACG HT + G++ +G ++G + +
Sbjct: 349 NDWYGRNQWFPHKFLGPMDNI--SVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDT 406
Query: 383 TYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACS 416
P V+ G V+ +A G H+A + + S
Sbjct: 407 QGVARPKEVESLKGSRVKSVACGPWHTAAIVEVMS 441
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%)
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
+I+ G H A + G +FTWG GQLG G R P V+ L+ V+S+ CG +
Sbjct: 539 EISSGSSHVAVLTMSGKVFTWGKGAEGQLGLGDYSNRSSPTLVEALEGRDVESVVCGFNF 598
Query: 126 TAAI 129
TAAI
Sbjct: 599 TAAI 602
>gi|403353979|gb|EJY76535.1| hypothetical protein OXYTRI_01950 [Oxytricha trifallax]
Length = 761
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 148/313 (47%), Gaps = 39/313 (12%)
Query: 21 SAIYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
S +YV+G Q G + +++ P+++P +F ++ L I CG HT A++S
Sbjct: 2 SLVYVFGSGECEQLGLGDDQPFEIKKPRRIP--MFDMGGLVGNKILKIVCGGMHTVALSS 59
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
G ++TWG N+ G LG +E P +V + I+ G T A +
Sbjct: 60 AGRVYTWGCNDEGALGRPGQENT--PIEVADTMKIPITDITAGDCHTVAYNQ-------- 109
Query: 140 STSRLWVWGQNQGSNFPRLFWGAFTPNTI------------ICQVSCGSVHVVALSECGL 187
+ +++++WG + + R + P I I ++ GS H +AL+ G
Sbjct: 110 NLNQVFLWGLYRNAMTGRTYEPVKEPTRIGQELFNKQTKNFIQKIKSGSHHTLALTTDGE 169
Query: 188 LQAWGYNEYGQLGRGITC--EGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
+ WG E G++GR + + Q R+ K +AK K+ V CG +HS V++
Sbjct: 170 VYGWGDPESGKIGRMLKTRNKNEQALRIEKIHAK---------KVRDVFCGNHHSFYVND 220
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
G+VY+WGL + GQLG + + P + LD + +A G HS A+T++G +Y
Sbjct: 221 KGQVYSWGLNNHGQLG---IGHKENTATPTHIPELDNQHVSVIAGGEHHSIAVTAEGKVY 277
Query: 306 AWGGSQAGQLGLG 318
WG + Q GLG
Sbjct: 278 CWGRNDESQCGLG 290
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 136/309 (44%), Gaps = 41/309 (13%)
Query: 83 LFTWGANEFGQLGDGTEEGR--KHPEKVKQ-----LQSEFVKSISCGAHCTAAIAEPREN 135
++ +G+ E QLG G ++ K P ++ L + I CG T A++
Sbjct: 4 VYVFGSGECEQLGLGDDQPFEIKKPRRIPMFDMGGLVGNKILKIVCGGMHTVALS----- 58
Query: 136 DGTISTSRLWVWGQNQGSNFPRL------FWGAFTPNTIICQVSCGSVHVVALSECGLLQ 189
S R++ WG N R A T I ++ G H VA ++ L Q
Sbjct: 59 ----SAGRVYTWGCNDEGALGRPGQENTPIEVADTMKIPITDITAGDCHTVAYNQ-NLNQ 113
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
+ + Y G T E ++ P I G F + I ++ G +H+ A++ +GEV
Sbjct: 114 VFLWGLYRNAMTGRTYEPVKEPTRI-GQELFNKQTKNF--IQKIKSGSHHTLALTTDGEV 170
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
Y WG G++G L++ +K R+ + ++DV CG HS + KG +Y+WG
Sbjct: 171 YGWGDPESGKIGRM-LKTRNKNEQALRIEKIHAKKVRDVFCGNHHSFYVNDKGQVYSWGL 229
Query: 310 SQAGQLGLGPQ--TRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
+ GQLG+G + T + + IP + + V ++A G H++ +G+++
Sbjct: 230 NNHGQLGIGHKENTATPTHIPELDNQH------------VSVIAGGEHHSIAVTAEGKVY 277
Query: 368 GWGYNSYGQ 376
WG N Q
Sbjct: 278 CWGRNDESQ 286
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 116/268 (43%), Gaps = 34/268 (12%)
Query: 155 FPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVI 214
P G N I+ ++ CG +H VALS G + WG N+ G LGR
Sbjct: 31 IPMFDMGGLVGNKIL-KIVCGGMHTVALSSAGRVYTWGCNDEGALGR------------- 76
Query: 215 KGYAKFLDEAPELEKI--TQVSCGEYHSAAVSEN-GEVYTWGLGSVGQLGHCSLQSGD-- 269
G E + KI T ++ G+ H+ A ++N +V+ WGL G +
Sbjct: 77 PGQENTPIEVADTMKIPITDITAGDCHTVAYNQNLNQVFLWGLYRNAMTGRTYEPVKEPT 136
Query: 270 ---KELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSL 326
+EL ++ FI+ + G H+ ALT+ G +Y WG ++G++G +TR
Sbjct: 137 RIGQELFNKQTKN----FIQKIKSGSHHTLALTTDGEVYGWGDPESGKIGRMLKTR---- 188
Query: 327 IPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAW 386
N+++ R I V+ V CG+ H+ G+++ WG N++GQ
Sbjct: 189 --NKNEQALRIEKIHA--KKVRDVFCGNHHSFYVNDKGQVYSWGLNNHGQLGIGHKENTA 244
Query: 387 YPSPVDWCVGEVRKLAAGGGHSAVLADA 414
P+ + + + AGG H ++ A
Sbjct: 245 TPTHIPELDNQHVSVIAGGEHHSIAVTA 272
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG N+ GQ G G + P +P EL N IA G H+ AV +
Sbjct: 221 KGQVYSWGLNNHGQLGI-GHKENTATPTHIP-EL------DNQHVSVIAGGEHHSIAVTA 272
Query: 80 DGTLFTWGANEFGQLGDG 97
+G ++ WG N+ Q G G
Sbjct: 273 EGKVYCWGRNDESQCGLG 290
>gi|326926479|ref|XP_003209427.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Meleagris
gallopavo]
Length = 4334
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 167/377 (44%), Gaps = 85/377 (22%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPP-------- 51
MD + T+RP D ++ K +Y+WG GQ GR + +P P
Sbjct: 3449 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMVPVAAPSFSQAQQVV 3506
Query: 52 -------------ELFGCPAGANSRW------------------------LDIACGHE-H 73
+ C G+ R L +CG + H
Sbjct: 3507 CGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGH 3566
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
+ A+ G +F+WG ++G+LG G + ++ P +++ LQ E V +SCG +A +
Sbjct: 3567 SMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTA-- 3624
Query: 134 ENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-----------ICQVSCGSVHVVAL 182
DG +L+ +G ++ RL G + + I QV+CG H VA+
Sbjct: 3625 --DG-----KLFTFGNG---DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAV 3674
Query: 183 SECG-LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
S G ++ A+G +YG+LG G P+ + I +V+CG S
Sbjct: 3675 SMDGSMVWAFGDGDYGKLGLG-NSTAKSSPQKVDILCGI--------GIKKVACGTQFSV 3725
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A++++G VYT+G + L ++ ++ P++V L G+FI+D+A G H+ AL+S
Sbjct: 3726 ALTKDGHVYTFGQDRLIGLPEGRARNHNR---PQQVPVLSGVFIEDIAVGAEHTLALSST 3782
Query: 302 GALYAWGGSQAGQLGLG 318
G +YAWG + GQLGLG
Sbjct: 3783 GDVYAWGSNSEGQLGLG 3799
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 185/405 (45%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ P+L P+ ++++ I G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQ------PKL--APSFSDAQ--TIEAGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG----T 138
+ G +G+LG G + +K+L E +SI ++ + +DG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQS---TLKKLTFEPHRSIK-------KVSSSKGSDGHTLAF 473
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ ++ WG + +P+L G ++C VS G H A++E G L
Sbjct: 474 TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGEL 532
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G P ++K ++ + +VSCG H+ A+S++G
Sbjct: 533 YTWGEGDFGRLGHG-DSNSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 581
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ + AL G+FI+ V G S ALTS G +Y
Sbjct: 582 TVWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVY 636
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V ++ G SH L D
Sbjct: 637 AWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-ISIGDSHCLALSHDNE 685
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVSIQQISAGTSHS 730
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 146/309 (47%), Gaps = 47/309 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V +DG
Sbjct: 3576 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTADGK 3627
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG++
Sbjct: 3628 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVS----MDGSM--- 3680
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNT------IIC-----QVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T + I+C +V+CG+ VAL++ G + +
Sbjct: 3681 -VWAFGDG---DYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTF 3736
Query: 192 GYNEYGQL--GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
G + L GR Q V+ G F+++ ++ G H+ A+S G+V
Sbjct: 3737 GQDRLIGLPEGRARNHNRPQQVPVLSGV--FIED---------IAVGAEHTLALSSTGDV 3785
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWG 308
Y WG S GQLG L + P + L G I+ ++ G HS A T+ A G
Sbjct: 3786 YAWGSNSEGQLG---LGHTNHVREPTLITVLQGKNIRQISAGRCHSAAWTAPPVPPRAPG 3842
Query: 309 GSQAGQLGL 317
S QLGL
Sbjct: 3843 VSVPLQLGL 3851
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P I I +V GS +AL+ G + AW
Sbjct: 583 -VWSFG---GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I +S G+ H A+S + EVY
Sbjct: 639 GCG--ACLGCGSSEATALRPKLIEELAA--------TRIVDISIGDSHCLALSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDG+ I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGVSIQQISAGTSHSLAWTA 735
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 97/226 (42%), Gaps = 29/226 (12%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +GQL G V+ A AP + QV CG+ + + NG V
Sbjct: 3475 WGAGRHGQLAEA-------GRNVMVPVA-----APSFSQAQQVVCGQNCTFVIQANGTVL 3522
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGALYAW 307
G GS G+LG + S D +L + AL G + + +CG HS ALT G +++W
Sbjct: 3523 ACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSW 3579
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G R R I L VQ+ +CG H+ V DG++
Sbjct: 3580 GDGDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTADGKLF 3629
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLA 412
+G YG+ ++ P V G ++ ++A G H+ ++
Sbjct: 3630 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVS 3675
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VSE EVY WG S Q L G +E + + +A + + G + +++ G
Sbjct: 368 VSETCEVYVWGSNSSHQ-----LVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ A G G+LGLG +L + + R+I + G HTL +
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RSIKKVSSSKG------SDGHTLAFTT 475
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+G + WG YG+ + S+ YP + + G+V ++AG HSA + +
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
>gi|224079652|ref|XP_002305904.1| predicted protein [Populus trichocarpa]
gi|222848868|gb|EEE86415.1| predicted protein [Populus trichocarpa]
Length = 1078
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 140/287 (48%), Gaps = 29/287 (10%)
Query: 23 IYVWGYN-HSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++VWG N + G + R +P+Q+ L G ++ACG HTAAV+S G
Sbjct: 378 LFVWGENKYGGNLVCEERTGSQWLPRQISGPLAGVSIS------NVACGDWHTAAVSSSG 431
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS- 140
LFT+G FG LG G + HP++V+ L+ +VKS++CG+ TAAI + + +
Sbjct: 432 QLFTYGDGTFGVLGHGNLQSVSHPKEVESLKGLWVKSVACGSWHTAAIVDVIFDRFKFNG 491
Query: 141 -TSRLWVWGQ-NQGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+L+ WG ++G P + QVSCG + VAL+ G +
Sbjct: 492 VGGKLFTWGDGDKGRLGHADLEKKLQPTCVAQLVEHDFVQVSCGRMLTVALTRTGKIYTM 551
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + +GQLG P+ ++ + E + ++S G YH AA++ G VYT
Sbjct: 552 GSSVHGQLG---------NPQAKNKSIAIVEGKLKEEFVKEISSGSYHVAALTSGGSVYT 602
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
WG G+ GQLG L + + +P V AL ++ +ACG + A+
Sbjct: 603 WGKGTNGQLG---LGNVEDRNVPTLVEALRDRQVQSIACGSNLTAAI 646
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 144/336 (42%), Gaps = 59/336 (17%)
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
+I+ G H A + G +F WG G+LG + P V+ L VK ++CG +
Sbjct: 309 NISLGRNHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPTIVESLDGFLVKFVACGEYQ 368
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQ-GSN-----------FPRLFWGAFTPNTIICQVS 173
T A+ + E L+VWG+N+ G N PR G I V+
Sbjct: 369 TCALTDSGE---------LFVWGENKYGGNLVCEERTGSQWLPRQISGPLA-GVSISNVA 418
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
CG H A+S G L +G +G LG G + + P+ ++ + V
Sbjct: 419 CGDWHTAAVSSSGQLFTYGDGTFGVLGHG-NLQSVSHPKEVESLKGLW--------VKSV 469
Query: 234 SCGEYHSAAVSE-----------NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG 282
+CG +H+AA+ + G+++TWG G G+LGH L +K+L P V L
Sbjct: 470 ACGSWHTAAIVDVIFDRFKFNGVGGKLFTWGDGDKGRLGHADL---EKKLQPTCVAQLVE 526
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQ--TRSFSLIPNESDTYFRNIPI 340
V+CG + + ALT G +Y G S GQLG PQ +S +++ + F
Sbjct: 527 HDFVQVSCGRMLTVALTRTGKIYTMGSSVHGQLG-NPQAKNKSIAIVEGKLKEEF----- 580
Query: 341 LVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
V+ ++ G H G ++ WG + GQ
Sbjct: 581 ------VKEISSGSYHVAALTSGGSVYTWGKGTNGQ 610
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 92/196 (46%), Gaps = 13/196 (6%)
Query: 221 LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKEL-LPRRVVA 279
L E + + +S G H+A +++ GEV+ WG GS G+LGH D ++ P V +
Sbjct: 298 LLEPTVMLDVRNISLGRNHAALITKRGEVFCWGEGSRGKLGH----KVDMDVSSPTIVES 353
Query: 280 LDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIP 339
LDG +K VACG +CALT G L+ WG ++ G + + +P R I
Sbjct: 354 LDGFLVKFVACGEYQTCALTDSGELFVWGENKYGGNLVCEERTGSQWLP-------RQIS 406
Query: 340 ILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-V 398
+ + VACG HT G++ +G ++G + +P V+ G V
Sbjct: 407 GPLAGVSISNVACGDWHTAAVSSSGQLFTYGDGTFGVLGHGNLQSVSHPKEVESLKGLWV 466
Query: 399 RKLAAGGGHSAVLADA 414
+ +A G H+A + D
Sbjct: 467 KSVACGSWHTAAIVDV 482
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 70/162 (43%), Gaps = 20/162 (12%)
Query: 262 HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQT 321
H +LQ LLP+ + + +++++ G H+ +T +G ++ WG G+LG
Sbjct: 286 HSTLQVDS--LLPKLLEPTVMLDVRNISLGRNHAALITKRGEVFCWGEGSRGKLG----- 338
Query: 322 RSFSLIPNESDTYFRNIPILVVPNG--VQLVACGHSHTLVYMRDGRIHGWGYNSYG--QA 377
++ D + I+ +G V+ VACG T G + WG N YG
Sbjct: 339 -------HKVDMDVSSPTIVESLDGFLVKFVACGEYQTCALTDSGELFVWGENKYGGNLV 391
Query: 378 ANEKSTYAWYPSPVDWCVG--EVRKLAAGGGHSAVLADACSL 417
E++ W P + + + +A G H+A ++ + L
Sbjct: 392 CEERTGSQWLPRQISGPLAGVSISNVACGDWHTAAVSSSGQL 433
>gi|125821491|ref|XP_698091.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
rerio]
Length = 4846
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 117/405 (28%), Positives = 178/405 (43%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ PK P + S I G T ++SDG+
Sbjct: 369 VYVWGSNSSHQLVEGTQEKILQ-PKLAP---------SFSDAQTIEAGQYCTFVISSDGS 418
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA----HCTAAIAEPRENDGT 138
+ G +G+LG G + +K+ +K +S H A +E
Sbjct: 419 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTSE------- 471
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG + +P+L G ++C VS G H A+SE G L
Sbjct: 472 ---GEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVSEDGEL 527
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G + P ++K ++ + +VSCG H+ A+S++G
Sbjct: 528 YTWGEGDFGRLGHGDS-NSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 576
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ V AL G+FI+ V G S ALTS G +Y
Sbjct: 577 TVWSFGGGDNGKLGH-----GDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVY 631
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V ++ G SH L D
Sbjct: 632 AWGCGAC--LGCG-SSEATALRP-------KLIEELATTRVVD-ISIGDSHCLALSHDNE 680
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 681 VYAWGNNSMGQCGQGNSTGPITKPKKVIGLDGVAIQQISAGTSHS 725
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 140/266 (52%), Gaps = 41/266 (15%)
Query: 68 ACGHE-HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+CG + H+ A+ G +F+WG ++G+LG G + ++ P +++ LQ E V +SCG +
Sbjct: 4072 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4131
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-----------ICQVSCG 175
A + +DG +L+ +G ++ RL G + + + QV+CG
Sbjct: 4132 AVVT----SDG-----KLFSFGNG---DYGRLGLGNTSNKKLPERVSALEGHQVGQVACG 4179
Query: 176 SVHVVALSECGL-LQAWGYNEYGQLGRGITC--EGLQGPRVIKGYAKFLDEAPELEKITQ 232
H +A+S G+ + A+G +YG+LG G + Q V+ G I +
Sbjct: 4180 LNHTLAVSADGMTVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-----------IKK 4228
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
V+CG S A++++G VYT+G + L ++ ++ P++V AL G+FI+DVA G
Sbjct: 4229 VACGTQFSVALTKDGNVYTFGQDRLIGLPEGRARNHNR---PQQVPALTGVFIEDVAVGA 4285
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLG 318
H+ L+S G +YAWG + GQLGLG
Sbjct: 4286 EHTLTLSSTGDVYAWGSNSEGQLGLG 4311
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 122/428 (28%), Positives = 192/428 (44%), Gaps = 66/428 (15%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
MD + T+RP D ++ K +++WG GQ GR + +P P
Sbjct: 3961 MDEQVMSWATSRPEDWHLGGKCDVFLWGAGRHGQLAEAGR--NILVPTLAP--------- 4009
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
+ S+ + CG T + ++GT+ G +G+LG G + + LQ V +
Sbjct: 4010 SFSQAQQVVCGQNCTFVIQANGTVSACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQM 4069
Query: 120 --SCGAH-CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI---- 168
SCG+ + A+ E E ++ WG ++ +L G P I
Sbjct: 4070 VTSCGSDGHSMALTESGE---------VFSWGDG---DYGKLGHGNSDRQRRPRQIEALQ 4117
Query: 169 ---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAP 225
+ Q+SCG H ++ G L ++G +YG+LG G T RV A
Sbjct: 4118 GEEVVQMSCGFKHSAVVTSDGKLFSFGNGDYGRLGLGNTSNKKLPERV---------SAL 4168
Query: 226 ELEKITQVSCGEYHSAAVSENG-EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF 284
E ++ QV+CG H+ AVS +G V+ +G G G+LG L + + P++V L GI
Sbjct: 4169 EGHQVGQVACGLNHTLAVSADGMTVWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCGIG 4225
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP 344
IK VACG S ALT G +Y +G Q +GL P+ R+ + + +P L
Sbjct: 4226 IKKVACGTQFSVALTKDGNVYTFG--QDRLIGL-PEGRA------RNHNRPQQVPAL--- 4273
Query: 345 NGVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKL 401
GV + VA G HTL G ++ WG NS GQ + + P+ + G+ ++++
Sbjct: 4274 TGVFIEDVAVGAEHTLTLSSTGDVYAWGSNSEGQLGLGHTNHVREPTLISALQGKNIQQI 4333
Query: 402 AAGGGHSA 409
+AG HSA
Sbjct: 4334 SAGRCHSA 4341
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 136/289 (47%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV+ DG
Sbjct: 474 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVSEDGE 526
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 527 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 577
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P + I +V GS +AL+ G + AW
Sbjct: 578 -VWSFG---GGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAW 633
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A ++ +S G+ H A+S + EVY
Sbjct: 634 GCG--ACLGCGSSEATALRPKLIEELAT--------TRVVDISIGDSHCLALSHDNEVYA 683
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V+ LDG+ I+ ++ G HS A T+
Sbjct: 684 WGNNSMGQCGQGN--STGPITKPKKVIGLDGVAIQQISAGTSHSLAWTA 730
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 142/307 (46%), Gaps = 43/307 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V SDG
Sbjct: 4088 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTSDGK 4139
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LF++G ++G+LG G +K PE+V L+ V ++CG + T A++ DG
Sbjct: 4140 LFSFGNGDYGRLGLGNTSNKKLPERVSALEGHQVGQVACGLNHTLAVSA----DG----- 4190
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNT------IIC-----QVSCGSVHVVALSECGLLQAW 191
+ VW G ++ +L G T + ++C +V+CG+ VAL++ G + +
Sbjct: 4191 -MTVWAFGDG-DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGNVYTF 4248
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G + +V F+++ V+ G H+ +S G+VY
Sbjct: 4249 GQDRLIGLPEGRARNHNRPQQVPALTGVFIED---------VAVGAEHTLTLSSTGDVYA 4299
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWGGS 310
WG S GQLG L + P + AL G I+ ++ G HS A T+ A G S
Sbjct: 4300 WGSNSEGQLG---LGHTNHVREPTLISALQGKNIQQISAGRCHSAAWTAPPVPPRAPGSS 4356
Query: 311 QAGQLGL 317
QLGL
Sbjct: 4357 VPLQLGL 4363
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 101/235 (42%), Gaps = 36/235 (15%)
Query: 191 WGYNEYGQL---GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
WG +GQL GR I L AP + QV CG+ + + NG
Sbjct: 3987 WGAGRHGQLAEAGRNILVPTL---------------APSFSQAQQVVCGQNCTFVIQANG 4031
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGAL 304
V G GS G+LG + S D +L + AL G + + +CG HS ALT G +
Sbjct: 4032 TVSACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQMVTSCGSDGHSMALTESGEV 4088
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 364
++WG G+LG G R R I L VQ+ +CG H+ V DG
Sbjct: 4089 FSWGDGDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDG 4138
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLADACSL 417
++ +G YG+ ++ P V G +V ++A G H+ AV AD ++
Sbjct: 4139 KLFSFGNGDYGRLGLGNTSNKKLPERVSALEGHQVGQVACGLNHTLAVSADGMTV 4193
Score = 44.7 bits (104), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 78/176 (44%), Gaps = 14/176 (7%)
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT 299
+A VSE EVY WG S QL G +E + + +A + + G + ++
Sbjct: 360 AAMVSETCEVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVIS 414
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
S G++ A G G+LGLG +L + + R I + G HTL
Sbjct: 415 SDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RAIKKVSSSKG------SDGHTLA 467
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+ +G + WG YG+ + S+ YP + + G+V ++AG HSA +++
Sbjct: 468 FTSEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSE 523
>gi|125549477|gb|EAY95299.1| hypothetical protein OsI_17124 [Oryza sativa Indica Group]
Length = 1042
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 170/374 (45%), Gaps = 59/374 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLD---IACGHEHTAAVAS 79
+++WG G + IPK LP L G +++ LD IACG H A +
Sbjct: 233 VFLWGSVLGSMLGSED------IPKSLP-RLVG-----SAKMLDVQSIACGENHAAIITK 280
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE----N 135
G ++TWG+ G+L P+ V+ L S VK+++ G+ T AI E
Sbjct: 281 QGEVYTWGSYSSGRLDQKVNVNASCPKMVESLASVHVKAVAFGSKHTCAITVSGELFEWG 340
Query: 136 DGTISTSRLWVW-GQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
+G S + W G+NQ FP F G N + +++CG H ++ G L +G
Sbjct: 341 EGAHSLGLMNDWYGRNQW--FPHKFLGPMD-NISVSKIACGEWHTAIITSSGQLFTYGDG 397
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE--------- 245
+G LG G T +G+ P+ + E+ + ++ V+CG +H+AA+ E
Sbjct: 398 TFGVLGHGDT-QGVARPKEV--------ESLKGSRVKSVACGPWHTAAIVEVMSSFKGNA 448
Query: 246 -NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
+G+++TWG G+LGH + +LLP V +L + V+CG + LT G +
Sbjct: 449 PSGKLFTWGDADRGKLGHADRK---MKLLPTCVDSLTAYDLIQVSCGTAVTVVLTVTGMV 505
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNES--DTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
+ G S+ GQLG P+ S+ E T F V+ ++ G SH V
Sbjct: 506 FTIGSSRHGQLG-NPKADGESICSVEGPLKTEF-----------VREISSGSSHVAVLTM 553
Query: 363 DGRIHGWGYNSYGQ 376
G++ WG + GQ
Sbjct: 554 SGKVFTWGKGAEGQ 567
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 120/246 (48%), Gaps = 31/246 (12%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
IACG HTA + S G LFT+G FG LG G +G P++V+ L+ VKS++CG T
Sbjct: 375 IACGEWHTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESLKGSRVKSVACGPWHT 434
Query: 127 AAIAEPREN-DGTISTSRLWVWGQ---------NQGSNFPRLFWGAFTPNTIICQVSCGS 176
AAI E + G + +L+ WG ++ + T +I QVSCG+
Sbjct: 435 AAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSLTAYDLI-QVSCGT 493
Query: 177 VHVVALSECGLLQAWGYNEYGQLGR----GITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
V L+ G++ G + +GQLG G + ++GP + E + +
Sbjct: 494 AVTVVLTVTGMVFTIGSSRHGQLGNPKADGESICSVEGPL-------------KTEFVRE 540
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
+S G H A ++ +G+V+TWG G+ GQLG L P V AL+G ++ V CG
Sbjct: 541 ISSGSSHVAVLTMSGKVFTWGKGAEGQLG---LGDYSNRSSPTLVEALEGRDVESVVCGF 597
Query: 293 VHSCAL 298
+ A+
Sbjct: 598 NFTAAI 603
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 35/215 (16%)
Query: 211 PRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK 270
PR++ G AK LD + ++CGE H+A +++ GEVYTWG S G+L +
Sbjct: 254 PRLV-GSAKMLD-------VQSIACGENHAAIITKQGEVYTWGSYSSGRLDQ---KVNVN 302
Query: 271 ELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNE 330
P+ V +L + +K VA G H+CA+T G L+ WG A LGL
Sbjct: 303 ASCPKMVESLASVHVKAVAFGSKHTCAITVSGELFEWGEG-AHSLGL------------M 349
Query: 331 SDTYFRNI--------PILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKS 382
+D Y RN P+ + V +ACG HT + G++ +G ++G + +
Sbjct: 350 NDWYGRNQWFPHKFLGPMDNI--SVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDT 407
Query: 383 TYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACS 416
P V+ G V+ +A G H+A + + S
Sbjct: 408 QGVARPKEVESLKGSRVKSVACGPWHTAAIVEVMS 442
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%)
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
+I+ G H A + G +FTWG GQLG G R P V+ L+ V+S+ CG +
Sbjct: 540 EISSGSSHVAVLTMSGKVFTWGKGAEGQLGLGDYSNRSSPTLVEALEGRDVESVVCGFNF 599
Query: 126 TAAI 129
TAAI
Sbjct: 600 TAAI 603
>gi|340505322|gb|EGR31664.1| hypothetical protein IMG5_104860 [Ichthyophthirius multifiliis]
Length = 1126
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 142/295 (48%), Gaps = 51/295 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
IACGH HT + + L+++G + G LG+ E K P+++ L+ +FV+ ++CGA +
Sbjct: 26 IACGHHHTLIIDENNQLYSFGMGKTGLLGNEHLEDVKIPQQLN-LKQKFVQ-VACGATHS 83
Query: 127 AAIAEPRENDGTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQ-VSCGSVHV 179
A+ TIS ++ WG+N G+ L N II + + CG H
Sbjct: 84 LAL--------TIS-GIIFSWGKNLRGQLGHGNQNDCLKPKEVIQNDIIAEYIDCGDQHS 134
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
+S+ L WG +Y +LG G+T + L +V+ E +T VSCG H
Sbjct: 135 AFVSKNKELYTWGNGQYYRLGHGVTTDELIPKKVV---------VLEDYYVTHVSCGMNH 185
Query: 240 SAAVSENGEVYTWGLGSVGQLG---HCSLQSGDKELLPRRVVALDGIFIKD-----VACG 291
+ V+ G VY WG G G+LG C Q+ LP RV + F K+ VA G
Sbjct: 186 TLIVTGEGFVYAWGDGMYGKLGVSEDCKTQT-----LPTRVGMICKKFRKNKMYYQVAAG 240
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLG-----------PQTRSFSLIPNESDTYF 335
+HS AL++ G ++ WG S++G LG+G PQ S L +++ +F
Sbjct: 241 SMHSLALSTNGQIFTWGSSKSGNLGIGYNKDIQDYYTQPQKISIKLNKDKNLQFF 295
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 134/295 (45%), Gaps = 46/295 (15%)
Query: 110 QLQSEFVKSISCGAHCTAAIAEPRE-------NDGTISTSRLWVWGQNQGSNFPRLFWGA 162
+LQ + + I+CG H T I E + G + L Q N + F
Sbjct: 17 ELQDKEIIYIACGHHHTLIIDENNQLYSFGMGKTGLLGNEHLEDVKIPQQLNLKQKF--- 73
Query: 163 FTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKG--YAKF 220
QV+CG+ H +AL+ G++ +WG N GQLG G + L+ VI+ A++
Sbjct: 74 -------VQVACGATHSLALTISGIIFSWGKNLRGQLGHGNQNDCLKPKEVIQNDIIAEY 126
Query: 221 LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL 280
+D CG+ HSA VS+N E+YTWG G +LGH EL+P++VV L
Sbjct: 127 ID------------CGDQHSAFVSKNKELYTWGNGQYYRLGHGVTTD---ELIPKKVVVL 171
Query: 281 DGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTY---FRN 337
+ ++ V+CG H+ +T +G +YAWG G+LG+ ++ +L P FR
Sbjct: 172 EDYYVTHVSCGMNHTLIVTGEGFVYAWGDGMYGKLGVSEDCKTQTL-PTRVGMICKKFRK 230
Query: 338 IPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ--AANEKSTYAWYPSP 390
+ VA G H+L +G+I WG + G K +Y P
Sbjct: 231 NKMYY------QVAAGSMHSLALSTNGQIFTWGSSKSGNLGIGYNKDIQDYYTQP 279
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 121/259 (46%), Gaps = 43/259 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRE--RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHT 74
I + +Y +G G+TG G E ++IP+QL +++ +ACG H+
Sbjct: 36 IDENNQLYSFG---MGKTGLLGNEHLEDVKIPQQL---------NLKQKFVQVACGATHS 83
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFV-KSISCGAHCTAAIAEPR 133
A+ G +F+WG N GQLG G + P++V +Q++ + + I CG +A +++ +
Sbjct: 84 LALTISGIIFSWGKNLRGQLGHGNQNDCLKPKEV--IQNDIIAEYIDCGDQHSAFVSKNK 141
Query: 134 ENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-----------ICQVSCGSVHVVAL 182
E L+ WG Q + RL G T I + VSCG H + +
Sbjct: 142 E---------LYTWGNGQ---YYRLGHGVTTDELIPKKVVVLEDYYVTHVSCGMNHTLIV 189
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
+ G + AWG YG+LG C+ P + K + + + QV+ G HS A
Sbjct: 190 TGEGFVYAWGDGMYGKLGVSEDCKTQTLPTRVGMICK---KFRKNKMYYQVAAGSMHSLA 246
Query: 243 VSENGEVYTWGLGSVGQLG 261
+S NG+++TWG G LG
Sbjct: 247 LSTNGQIFTWGSSKSGNLG 265
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 118/253 (46%), Gaps = 36/253 (14%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I ++CG H + + E L ++G + G LG E ++ P+ + KF+
Sbjct: 23 IIYIACGHHHTLIIDENNQLYSFGMGKTGLLGNE-HLEDVKIPQQLNLKQKFV------- 74
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIK 286
QV+CG HS A++ +G +++WG GQLGH G++ L P+ V+ D I +
Sbjct: 75 ---QVACGATHSLALTISGIIFSWGKNLRGQLGH-----GNQNDCLKPKEVIQND-IIAE 125
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
+ CG HS ++ LY WG Q +LG G T LIP + +++
Sbjct: 126 YIDCGDQHSAFVSKNKELYTWGNGQYYRLGHGVTTDE--LIPKK--------VVVLEDYY 175
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQA-ANEKSTYAWYPSPVDWCVGEVRK----- 400
V V+CG +HTL+ +G ++ WG YG+ +E P+ V + RK
Sbjct: 176 VTHVSCGMNHTLIVTGEGFVYAWGDGMYGKLGVSEDCKTQTLPTRVGMICKKFRKNKMYY 235
Query: 401 -LAAGGGHSAVLA 412
+AAG HS L+
Sbjct: 236 QVAAGSMHSLALS 248
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 117/257 (45%), Gaps = 22/257 (8%)
Query: 135 NDGTISTSRLWVWGQNQGSN--------FPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
N +I + +L + + +N F R F + N II +SC +H +A+S+ G
Sbjct: 388 NQNSIVSKKLKQQAKTKNTNEIDTDLNDFNRPFQIQYFKNNIIRYISCSYLHAIAISQKG 447
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
WG N Y QLG G +C P+ ++G E + I +C + SA +++
Sbjct: 448 QAYVWGKNIYYQLGVGYSCNYNYIPQKLQG-------ILETKTIIMSACSDKFSALLTDK 500
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS-KGALY 305
GEV+T+G G LGH Q + ++P + D + +ACG ++++ K LY
Sbjct: 501 GEVWTFGTSDCGVLGH---QEKNYYVVPEPKMVNDIPQMIYIACGPQGMVSISAHKRQLY 557
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI-LVVPNGVQL--VACGHSHTLVYMR 362
AWG + GQLG+ ++ + D + + P VQ+ V G H++
Sbjct: 558 AWGNNIYGQLGIKIYRTEMNVNEYDEDKNGKQQNNEQIKPEEVQIKSVDMGMFHSVAIDN 617
Query: 363 DGRIHGWGYNSYGQAAN 379
+G+I+ G Y AN
Sbjct: 618 NGKIYSCGLRIYSGQAN 634
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 96/437 (21%), Positives = 173/437 (39%), Gaps = 75/437 (17%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
I+ WG N GQ G + L+ P E+ A ++D CG +H+A V+ +
Sbjct: 92 IFSWGKNLRGQLGHGNQNDCLK-----PKEVIQNDIIA--EYID--CGDQHSAFVSKNKE 142
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST- 141
L+TWG ++ +LG G P+KV L+ +V +SCG + T + +G +
Sbjct: 143 LYTWGNGQYYRLGHGVTTDELIPKKVVVLEDYYVTHVSCGMNHTLIVT----GEGFVYAW 198
Query: 142 -----SRLWVWGQNQGSNFPR---LFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
+L V + P + F N + QV+ GS+H +ALS G + WG
Sbjct: 199 GDGMYGKLGVSEDCKTQTLPTRVGMICKKFRKNKMYYQVAAGSMHSLALSTNGQIFTWGS 258
Query: 194 NEYGQLGRGITCEGLQGPRVIKGY---AKFLDEAPELEKITQVSCGEYHSAAVS------ 244
++ G LG G + I+ Y + + +K Q +Y+ A ++
Sbjct: 259 SKSGNLGIGYN-------KDIQDYYTQPQKISIKLNKDKNLQFFSLQYYQAELNNKLTKA 311
Query: 245 --------------ENGEVYTWGLGSVGQLGHCSLQSGDKELLPR---------RVVALD 281
+N EV + ++ L DK+L+ R + +
Sbjct: 312 KNNNKNQINLNDSLDNIEVIQF------KIDMYPLYIIDKQLIQRGPPSNIIFCQASQNN 365
Query: 282 GIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL 341
F+ + G + +C KG + +L +T++ + I + + + R I
Sbjct: 366 SFFLAN--NGQIFACGSVKKGIKLNQNSIVSKKLKQQAKTKNTNEIDTDLNDFNRPFQIQ 423
Query: 342 VVPNG-VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKS-TYAWYPSPVDWCVGEVR 399
N ++ ++C + H + + G+ + WG N Y Q S Y + P + + E +
Sbjct: 424 YFKNNIIRYISCSYLHAIAISQKGQAYVWGKNIYYQLGVGYSCNYNYIPQKLQGIL-ETK 482
Query: 400 KL---AAGGGHSAVLAD 413
+ A SA+L D
Sbjct: 483 TIIMSACSDKFSALLTD 499
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 133/325 (40%), Gaps = 55/325 (16%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKH-PEKVK-QLQSEFVKSISCGAH 124
I+C + H A++ G + WG N + QLG G + P+K++ L+++ + +C
Sbjct: 433 ISCSYLHAIAISQKGQAYVWGKNIYYQLGVGYSCNYNYIPQKLQGILETKTIIMSACSDK 492
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSNF----PRLFWGAFTPNTIICQVSCGSVHVV 180
+A + + E T TS V G + + + P++ P I ++CG +V
Sbjct: 493 FSALLTDKGE-VWTFGTSDCGVLGHQEKNYYVVPEPKMVND--IPQMIY--IACGPQGMV 547
Query: 181 ALS-ECGLLQAWGYNEYGQLGRGITCEGL-------------QGPRVIKGYAKFLDEAPE 226
++S L AWG N YGQLG I + Q IK PE
Sbjct: 548 SISAHKRQLYAWGNNIYGQLGIKIYRTEMNVNEYDEDKNGKQQNNEQIK---------PE 598
Query: 227 LEKITQVSCGEYHSAAVSENGEVYTWGLGSV-GQLGHCSLQSG---DKELLPRRVVALDG 282
+I V G +HS A+ NG++Y+ GL GQ +++ D + + R L
Sbjct: 599 EVQIKSVDMGMFHSVAIDNNGKIYSCGLRIYSGQANVFNVEDAKGIDDQFILIRTNELQN 658
Query: 283 IFIKDVACGGVHSCALT--------SKGALYAWGGSQAGQL------GLGPQTRSFSLIP 328
V+C H+ AL+ ++ +YAWG G L + + P
Sbjct: 659 QQFIQVSCSEYHTLALSIQEQGEEQAQQYVYAWGLCNLGNLIFENSQDIVKYYQQLKQKP 718
Query: 329 NES---DTYFRNIPILVVPNGVQLV 350
+S + Y IL+ P + L+
Sbjct: 719 QKSQDLNKYISQKQILLPPTNISLI 743
>gi|154339233|ref|XP_001562308.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062891|emb|CAM39338.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 1720
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 107/329 (32%), Positives = 146/329 (44%), Gaps = 48/329 (14%)
Query: 62 SRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQ------SEF 115
+R IACG T V DG L++ G + GQLG G R V +LQ +E
Sbjct: 591 ARVAQIACGLAVTYVVTVDGVLYSCGRADNGQLGIGGRSMRYAHAGVSKLQRVLFKDNER 650
Query: 116 VKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQN---QGSNFPRLFWGAFTPNTI---- 168
V I+ G C A+A R+N L+ WG N Q P TP +
Sbjct: 651 VTRIAAGTAC--AVALTRDNA-------LYCWGHNVYGQCLKMPDASR-VLTPVRLKAGV 700
Query: 169 --ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQ---GPRVIKGYAKFLD- 222
I V G V L + G++ WG LG ++ +GL+ P K + +
Sbjct: 701 HKILDVCFGQFFGVLLFDDGVMGTWGIAS--MLGCNMSDKGLEHSLAPDQCKCARQVVHL 758
Query: 223 EAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG 282
+ V G +H+ A+S+ GEVYTWG+GS G+LGH + S E PR V L
Sbjct: 759 RVGTSNPMAAVRAGPWHALAISQKGEVYTWGVGSNGRLGHGTDSS---EAKPRLVEGLRS 815
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
F+ D +C VHS LTS GA+Y +GG+ GQLGL L P R +P +V
Sbjct: 816 SFVVDASCSHVHSAVLTSTGAVYVFGGNAEGQLGL------RGLAP-------RRLPTMV 862
Query: 343 -VPNGVQLVACGHSHTLVYMRDGRIHGWG 370
+P V C HT + + DG + G
Sbjct: 863 PLPIKAVAVMCAREHTCILLADGDVVACG 891
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 94/408 (23%), Positives = 162/408 (39%), Gaps = 78/408 (19%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+YV+G N GQ G +G + R+P +P + + + + C EHT + +DG
Sbjct: 836 AVYVFGGNAEGQLGLRGLAPR-RLPTMVPLPI---------KAVAVMCAREHTCILLADG 885
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQ------LQSEFVKSISCGAHCTAAI-----A 130
+ G+ +G G P ++ L S +++ ++ H A+ +
Sbjct: 886 DVVACGSYRMCGIGLGYGRRFCAPMRILTNYVTLVLHSGYLQGMAGVVHRRTAVMVLGHS 945
Query: 131 EPRENDGTISTS-RLWVWGQNQGSNFPRLFW----------------------------- 160
+E S S R V G+ F + W
Sbjct: 946 TIKEVSRVPSLSVRNGVRCAASGAGFLVVLWENNTLVAIGRGERGQLGIGDCMKSYRSDD 1005
Query: 161 ----GAFT----PNTIICQ-VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
AF+ P+ +I Q V CG +AL ECG++ WG N++ +L + + P
Sbjct: 1006 VTVASAFSEVHIPSDVIIQHVRCGPDFALALDECGVVYGWGSNDHQKLCQPAGVAHIFTP 1065
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQS---G 268
+ YA E+I Q+ CG A++ +GEV G LG + + G
Sbjct: 1066 VRVDAYAS--------ERIVQIVCGGTFVVALTVDGEVLAHGEAMYCGLGVSTSPAKAKG 1117
Query: 269 DKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIP 328
+P RV L I VA G H+ A+T+ +++AWG G LG G + + + P
Sbjct: 1118 SDVSVPIRVAGLRDIVA--VAAGCRHAVAMTASCSVFAWG---VGVLGTG--SNADTTDP 1170
Query: 329 NESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
S + + + ++ + CG ++ +G + WG N +G+
Sbjct: 1171 ASSASVVLTPVRVALSQTIRSIGCGPHNSFAINDEGELWVWGMNKFGE 1218
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 110/283 (38%), Gaps = 54/283 (19%)
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
N R IA G A+ D L+ WG N +GQ K P+ + L +K+
Sbjct: 648 NERVTRIAAGTACAVALTRDNALYCWGHNVYGQC-------LKMPDASRVLTPVRLKA-- 698
Query: 121 CGAHCTAAIAEPRE------NDGTISTSRLWVWGQNQGSNFP-RLFWGAFTPNTIICQ-- 171
G H + + +DG + T W G N + + P+ C
Sbjct: 699 -GVHKILDVCFGQFFGVLLFDDGVMGT---WGIASMLGCNMSDKGLEHSLAPDQCKCARQ 754
Query: 172 --------------VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGY 217
V G H +A+S+ G + WG G+LG G T PR+++G
Sbjct: 755 VVHLRVGTSNPMAAVRAGPWHALAISQKGEVYTWGVGSNGRLGHG-TDSSEAKPRLVEGL 813
Query: 218 AKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV 277
+ SC HSA ++ G VY +G + GQLG + L PRR+
Sbjct: 814 RSSF--------VVDASCSHVHSAVLTSTGAVYVFGGNAEGQLGL-------RGLAPRRL 858
Query: 278 VALDGIFIKDVA--CGGVHSCALTSKGALYAWGGSQAGQLGLG 318
+ + IK VA C H+C L + G + A G + +GLG
Sbjct: 859 PTMVPLPIKAVAVMCAREHTCILLADGDVVACGSYRMCGIGLG 901
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 124/327 (37%), Gaps = 48/327 (14%)
Query: 59 GANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKS 118
G ++ + G H A++ G ++TWG G+LG GT+ P V+ L+S FV
Sbjct: 761 GTSNPMAAVRAGPWHALAISQKGEVYTWGVGSNGRLGHGTDSSEAKPRLVEGLRSSFVVD 820
Query: 119 ISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNF------PRLFWGAFTPNTIICQV 172
SC +H +A+ ST ++V+G N PR V
Sbjct: 821 ASC-SHVHSAV--------LTSTGAVYVFGGNAEGQLGLRGLAPRRLPTMVPLPIKAVAV 871
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
C H L G + A G +G G R++ Y + + L+ +
Sbjct: 872 MCAREHTCILLADGDVVACGSYRMCGIGLGYGRRFCAPMRILTNYVTLVLHSGYLQGM-- 929
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL---DGIFIKDVA 289
G H +V LGH ++ KE+ RV +L +G ++ A
Sbjct: 930 --AGVVHRRT-------------AVMVLGHSTI----KEV--SRVPSLSVRNG--VRCAA 966
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFR--NIPILVVPNGV 347
G L L A G + GQLG+G +S+ + F +IP V+ +
Sbjct: 967 SGAGFLVVLWENNTLVAIGRGERGQLGIGDCMKSYRSDDVTVASAFSEVHIPSDVI---I 1023
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSY 374
Q V CG L G ++GWG N +
Sbjct: 1024 QHVRCGPDFALALDECGVVYGWGSNDH 1050
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 89/215 (41%), Gaps = 19/215 (8%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAK-----FLDE 223
+ Q++CG ++ G+L + G + GQLG G G G +K F D
Sbjct: 593 VAQIACGLAVTYVVTVDGVLYSCGRADNGQLGIG----GRSMRYAHAGVSKLQRVLFKDN 648
Query: 224 APELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
E++T+++ G + A++ + +Y WG GQ + + L P R+ A G+
Sbjct: 649 ----ERVTRIAAGTACAVALTRDNALYCWGHNVYGQC--LKMPDASRVLTPVRLKA--GV 700
Query: 284 F-IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
I DV G L G + WG + + + SL P++ + + + V
Sbjct: 701 HKILDVCFGQFFGVLLFDDGVMGTWGIASMLGCNMSDKGLEHSLAPDQCKCARQVVHLRV 760
Query: 343 -VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
N + V G H L + G ++ WG S G+
Sbjct: 761 GTSNPMAAVRAGPWHALAISQKGEVYTWGVGSNGR 795
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 80/205 (39%), Gaps = 20/205 (9%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKH---PEKVKQLQSEFVKSISCGA 123
+ CG + A+ G ++ WG+N+ +L G H P +V SE + I CG
Sbjct: 1026 VRCGPDFALALDECGVVYGWGSNDHQKLCQ--PAGVAHIFTPVRVDAYASERIVQIVCGG 1083
Query: 124 HCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-------ICQVSCGS 176
A+ DG + ++ S P G+ I I V+ G
Sbjct: 1084 TFVVALTV----DGEVLAHGEAMYCGLGVSTSPAKAKGSDVSVPIRVAGLRDIVAVAAGC 1139
Query: 177 VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG 236
H VA++ + AWG G T + V+ + + I + CG
Sbjct: 1140 RHAVAMTASCSVFAWGVGVLGTGSNADTTDPASSASVVLTPVRVALS----QTIRSIGCG 1195
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLG 261
++S A+++ GE++ WG+ G+ G
Sbjct: 1196 PHNSFAINDEGELWVWGMNKFGECG 1220
>gi|432856462|ref|XP_004068433.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Oryzias latipes]
Length = 4777
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 166/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + IY G +G+ G ++IP+Q+ + + + + G H A
Sbjct: 2969 VTVEGKIYACGEATNGRLGLGLSSGTIQIPRQI-----SALSNYVVKKVAVHSGGRHAMA 3023
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AAI
Sbjct: 3024 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT------ 3077
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 3078 ---SSGELYSWGLGE---YGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALT 3131
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 3132 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 3182
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH + K P+ V L G I VA G +H A+T G
Sbjct: 3183 TKSGVVWTWGKGDYFRLGHGTDVHVRK---PQIVEGLRGKKIVHVAVGALHCLAVTDSGQ 3239
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 3240 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3286
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3030 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAAITSSGE 3081
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L++WG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 3082 LYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEG------- 3134
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 3135 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3191
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P++++G +KI V+ G H AV+++G+VY
Sbjct: 3192 GKGDYFRLGHGTDVH-VRKPQIVEGLRG--------KKIVHVAVGALHCLAVTDSGQVYA 3242
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3243 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3288
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 179/412 (43%), Gaps = 69/412 (16%)
Query: 20 KSAIYVWGYNHSGQTG-RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
++ ++VWG N Q G KG + ++ P + N + +A G + AV
Sbjct: 2920 RTKVFVWGLNDKDQLGGLKGSKIKV-------PSFSETLSALNV--VQVAGGSKSLFAVT 2970
Query: 79 SDGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRE 134
+G ++ G G+LG G G + P ++ L + VK ++ G H A
Sbjct: 2971 VEGKIYACGEATNGRLGLGLSSGTIQIPRQISALSNYVVKKVAVHSGGRHAMALTV---- 3026
Query: 135 NDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSE 184
DG +++ WG+ PRL T I ++CGS H A++
Sbjct: 3027 -DG-----KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAAITS 3078
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGP--RVIKGYAKFLDEAPELEKITQVSCG--EYHS 240
G L +WG EYG+LG G L+ +V+ G+ ++ QV+CG + +
Sbjct: 3079 SGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGH-----------RVIQVACGSRDAQT 3127
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
A+++ G V++WG G G+LG + + +P+ + L+G + + CG S ALT
Sbjct: 3128 LALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTK 3184
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTL 358
G ++ WG +LG G +D + R I+ G ++V A G H L
Sbjct: 3185 SGVVWTWGKGDYFRLGHG------------TDVHVRKPQIVEGLRGKKIVHVAVGALHCL 3232
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
G+++ WG N +GQ N +T P+ V G+ + ++A G HS
Sbjct: 3233 AVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3284
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 127/283 (44%), Gaps = 35/283 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +DIA G H+A + + G
Sbjct: 4003 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRGVEV--VDIAAGGAHSACITASGE 4054
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFTWG +G+LG G E + P+ V LQ V ++CG+ + ++
Sbjct: 4055 LFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDD------- 4107
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
+W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 4108 MVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4167
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 4168 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4218
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
GQLG + + + PR V AL G I VACG H+ A
Sbjct: 4219 NDEGQLGDGTTNAIQR---PRLVAALQGKKINRVACGSAHTLA 4258
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 137/310 (44%), Gaps = 53/310 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ G +H A++S+G +++WG E G+LG G P ++ L+ V I+ G +
Sbjct: 3987 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHS 4046
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCG 175
A I ++ L+ WG+ + + RL G P + + V+CG
Sbjct: 4047 ACIT---------ASGELFTWGKGR---YGRLGHGDSEDQLKPKLVDALQGHRVIDVACG 4094
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + L++ ++ +WG +YG+LGRG +G + P I + +V
Sbjct: 4095 SGDAQTLCLTDDDMVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVKV 4145
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G VYTWG G +LGH S D PR+V L G + +A G +
Sbjct: 4146 ECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSL 4202
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLV 350
H T G +Y WG + GQLG G T P LV + V
Sbjct: 4203 HCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKINRV 4249
Query: 351 ACGHSHTLVY 360
ACG +HTL +
Sbjct: 4250 ACGSAHTLAW 4259
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 176/412 (42%), Gaps = 76/412 (18%)
Query: 22 AIYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
IY WG+NH GQ G G E ++++P P E A A R + + G + AV +D
Sbjct: 3896 TIYGWGHNHRGQLG--GIEGAKVKVPT--PTE-----ALATLRPVQLIGGEQTLFAVTAD 3946
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDG 137
G L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 3947 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE------ 4000
Query: 138 TISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
++ WG+ + PR+ + ++ G H ++ G
Sbjct: 4001 ----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GVEVVDIAAGGAHSACITASGE 4054
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAVSE 245
L WG YG+LG G + + L+ P+++ +A + ++ V+CG + + +++
Sbjct: 4055 LFTWGKGRYGRLGHGDSEDQLK-PKLV--------DALQGHRVIDVACGSGDAQTLCLTD 4105
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+ V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4106 DDMVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVY 4162
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHT 357
WG +LG G SD + R P VQ +A G H
Sbjct: 4163 TWGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHC 4204
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
+ DG ++ WG N GQ + + P V G ++ ++A G H+
Sbjct: 4205 VCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 4256
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 126/253 (49%), Gaps = 30/253 (11%)
Query: 134 ENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
E+ +I T +++VWG N +GS + + QV+ GS + A++
Sbjct: 2914 ESAASIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2972
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + A G G+LG G++ +Q PR I + ++ K V G H+ A++
Sbjct: 2973 GKIYACGEATNGRLGLGLSSGTIQIPRQISALSNYV------VKKVAVHSGGRHAMALTV 3026
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS A+TS G LY
Sbjct: 3027 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAAITSSGELY 3083
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRD 363
+WG + G+LG G T L P + + +L+ +Q VACG + TL +
Sbjct: 3084 SWGLGEYGRLGHGDNTT--QLRP-------KLVKVLLGHRVIQ-VACGSRDAQTLALTDE 3133
Query: 364 GRIHGWGYNSYGQ 376
G + WG +G+
Sbjct: 3134 GLVFSWGDGDFGK 3146
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 138/277 (49%), Gaps = 46/277 (16%)
Query: 59 GANSRWLDIACGH---EHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV-----KQ 110
G +SR + H +H A+++ G +++WG + G+LG G + P + KQ
Sbjct: 440 GLSSRKIVKLAAHPDGQHFLALSTSGEVYSWGCGDGGRLGHGDATYLEEPALITTFSGKQ 499
Query: 111 LQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGA----FTPN 166
+ V+ I+CG+ +AA+ DG L+ WG+ N+ RL G+ TP
Sbjct: 500 TGKQVVQ-IACGSTYSAAVTA----DG-----ELYTWGRG---NYGRLGHGSSEDVTTPM 546
Query: 167 TI-------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGY 217
+ + V+CGS +A++E G + +WG +YG+LGRG +G + P++++
Sbjct: 547 LVTALKGQKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLVEKL 605
Query: 218 AKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV 277
I +V CG S A++++G+VYTWG G +LGH + + P+ +
Sbjct: 606 QDL--------DIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGH---GTDEHVRYPKLL 654
Query: 278 VALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+L G + D+A G H ALT +G +++WG + Q
Sbjct: 655 DSLQGKKVVDIAVGSTHCLALTDEGEVHSWGSNDKLQ 691
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 125/275 (45%), Gaps = 27/275 (9%)
Query: 146 VWGQNQGSNF--PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGI 203
V+ QN S P L G + + H +ALS G + +WG + G+LG G
Sbjct: 423 VYTQNYKSTTLAPMLIHGLSSRKIVKLAAHPDGQHFLALSTSGEVYSWGCGDGGRLGHG- 481
Query: 204 TCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHC 263
L+ P +I ++ +++ Q++CG +SAAV+ +GE+YTWG G+ G+LGH
Sbjct: 482 DATYLEEPALITTFSG----KQTGKQVVQIACGSTYSAAVTADGELYTWGRGNYGRLGH- 536
Query: 264 SLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQT 321
S + P V AL G + DVACG + A+T G +++WG G+LG G
Sbjct: 537 --GSSEDVTTPMLVTALKGQKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD 594
Query: 322 --RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAAN 379
++ L+ D + V CG ++ +DG+++ WG + +
Sbjct: 595 GCKTPKLVEKLQDL------------DIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGH 642
Query: 380 EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ YP +D G +V +A G H L D
Sbjct: 643 GTDEHVRYPKLLDSLQGKKVVDIAVGSTHCLALTD 677
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 99/212 (46%), Gaps = 28/212 (13%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ Q++CGS + A++ G L WG YG+LG G + E + P ++ +
Sbjct: 504 VVQIACGSTYSAAVTADGELYTWGRGNYGRLGHG-SSEDVTTPMLVTALKG--------Q 554
Query: 229 KITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
K+ V+CG + + AV+ENG+V++WG G G+LG D P+ V L + I
Sbjct: 555 KVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR---GGSDGCKTPKLVEKLQDLDIV 611
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
V CG S ALT G +Y WG +LG G +D + R +L G
Sbjct: 612 KVCCGSQFSVALTKDGQVYTWGKGDNQRLGHG------------TDEHVRYPKLLDSLQG 659
Query: 347 VQLV--ACGHSHTLVYMRDGRIHGWGYNSYGQ 376
++V A G +H L +G +H WG N Q
Sbjct: 660 KKVVDIAVGSTHCLALTDEGEVHSWGSNDKLQ 691
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 133/290 (45%), Gaps = 39/290 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANS--RWLDIACGHEHTAAVASD 80
+Y WG G+ G G L P L +G + + + IACG ++AAV +D
Sbjct: 467 VYSWGCGDGGRLGH-GDATYLE-----EPALITTFSGKQTGKQVVQIACGSTYSAAVTAD 520
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G L+TWG +G+LG G+ E P V L+ + V ++CG+ +A
Sbjct: 521 GELYTWGRGNYGRLGHGSSEDVTTPMLVTALKGQKVVDVACGSGDAQTLA-------VTE 573
Query: 141 TSRLWVWGQ----------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
++W WG + G P+L + I +V CGS VAL++ G +
Sbjct: 574 NGQVWSWGDGDYGKLGRGGSDGCKTPKLV--EKLQDLDIVKVCCGSQFSVALTKDGQVYT 631
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG + +LG G T E ++ Y K LD + +K+ ++ G H A+++ GEV+
Sbjct: 632 WGKGDNQRLGHG-TDEHVR-------YPKLLDSL-QGKKVVDIAVGSTHCLALTDEGEVH 682
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
+W GS +L H +K+ P+ + L+ I ++CG S A +S
Sbjct: 683 SW--GSNDKLQHFDTLFPNKK-QPKALPGLNSKHIVGISCGPGQSFAWSS 729
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 139/340 (40%), Gaps = 30/340 (8%)
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEP 132
T + GT++ WG N GQLG K P + L + V+ I A A+
Sbjct: 3888 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADG 3947
Query: 133 RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
+ G + + P L V+ G H +ALS G + +WG
Sbjct: 3948 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4007
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
E G+LG G PRVI+ ++ ++ G HSA ++ +GE++TW
Sbjct: 4008 EAEDGKLGHG-NRSPCDRPRVIESLRGV--------EVVDIAAGGAHSACITASGELFTW 4058
Query: 253 GLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWG 308
G G G+LGH GD E L P+ V AL G + DVACG + LT +++WG
Sbjct: 4059 GKGRYGRLGH-----GDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWG 4113
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHG 368
G+LG G +P + D+ + GV V CG ++ + G ++
Sbjct: 4114 DGDYGKLGRG--GSDGCKVPMKIDS--------LTGLGVVKVECGSQFSVALTKSGAVYT 4163
Query: 369 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGH 407
WG Y + + + P V G +V +A G H
Sbjct: 4164 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4203
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 111/247 (44%), Gaps = 23/247 (9%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
Q+ G + A++ G L A GY G+LG G T E + P +++ ++K+
Sbjct: 3932 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGT-ESVSTPTLLESIQHVF-----IKKV 3985
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
V+ G H A+S GEVY+WG G+LGH + D+ PR + +L G+ + D+A
Sbjct: 3986 A-VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGVEVVDIAA 4041
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
GG HS +T+ G L+ WG + G+LG G + D + + + V V
Sbjct: 4042 GGAHSACITASGELFTWGKGRYGRLGHG----------DSEDQLKPKLVDALQGHRVIDV 4091
Query: 351 AC--GHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGH 407
AC G + TL D + WG YG+ S P +D G V K+ G
Sbjct: 4092 ACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQF 4151
Query: 408 SAVLADA 414
S L +
Sbjct: 4152 SVALTKS 4158
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 93/227 (40%), Gaps = 54/227 (23%)
Query: 174 CGSVHVVALSECGLLQAWGYNE-----------YGQLGRGITCEGLQGPRVIKGYAKFLD 222
CG +H ALS G+ Q + Y Q + T P +I G +
Sbjct: 391 CGPIHCKALSSTGVTQIVCSEKVFLILSRSGAVYTQNYKSTTL----APMLIHGLSS--- 443
Query: 223 EAPELEKITQVSCGE--YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVV 278
KI +++ H A+S +GEVY+WG G G+LGH GD L P +
Sbjct: 444 -----RKIVKLAAHPDGQHFLALSTSGEVYSWGCGDGGRLGH-----GDATYLEEPALIT 493
Query: 279 ALDGIF----IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTY 334
G + +ACG +S A+T+ G LY WG G+LG G + D
Sbjct: 494 TFSGKQTGKQVVQIACGSTYSAAVTADGELYTWGRGNYGRLGHG----------SSEDV- 542
Query: 335 FRNIPILVVP---NGVQLVAC--GHSHTLVYMRDGRIHGWGYNSYGQ 376
P+LV V VAC G + TL +G++ WG YG+
Sbjct: 543 --TTPMLVTALKGQKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGK 587
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 31/172 (18%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ GR G + ++P ++ L G + + CG + + A+ G
Sbjct: 4109 VWSWGDGDYGKLGRGGSD-GCKVPMKID-SLTGLGV------VKVECGSQFSVALTKSGA 4160
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIST 141
++TWG ++ +LG G+++ + P +V+ LQ + V +I+ G+ HC DG + T
Sbjct: 4161 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT-----EDGEVYT 4215
Query: 142 SRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALS 183
WG N PRL A I +V+CGS H +A S
Sbjct: 4216 -----WGDNDEGQLGDGTTNAIQRPRLV--AALQGKKINRVACGSAHTLAWS 4260
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 76/192 (39%), Gaps = 34/192 (17%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+TQ+ C E +S +G VYT S L P + L I +A
Sbjct: 404 VTQIVCSEKVFLILSRSGAVYTQNYKST-------------TLAPMLIHGLSSRKIVKLA 450
Query: 290 C--GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
G H AL++ G +Y+WG G+LG G TY ++ +G
Sbjct: 451 AHPDGQHFLALSTSGEVYSWGCGDGGRLGHG------------DATYLEEPALITTFSGK 498
Query: 348 QL------VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRK 400
Q +ACG +++ DG ++ WG +YG+ + S P V G+ V
Sbjct: 499 QTGKQVVQIACGSTYSAAVTADGELYTWGRGNYGRLGHGSSEDVTTPMLVTALKGQKVVD 558
Query: 401 LAAGGGHSAVLA 412
+A G G + LA
Sbjct: 559 VACGSGDAQTLA 570
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 11/178 (6%)
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
+A S +V+ WGL QLG G K +P L + + VA G A+T
Sbjct: 2915 SAASIRTKVFVWGLNDKDQLGGL---KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTV 2971
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+G +YA G + G+LGLG + + IP + + V V G H +
Sbjct: 2972 EGKIYACGEATNGRLGLGLSSGTIQ-IPRQISALSNYVVKKVA------VHSGGRHAMAL 3024
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWC-VGEVRKLAAGGGHSAVLADACSL 417
DG++ WG G+ + P ++ +R +A G HSA + + L
Sbjct: 3025 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGEL 3082
>gi|42568678|ref|NP_200895.2| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|10176914|dbj|BAB10107.1| unnamed protein product [Arabidopsis thaliana]
gi|332010005|gb|AED97388.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 445
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 156/352 (44%), Gaps = 50/352 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+++WG G+ G G+E + +P P LF IA G H+ A+ G
Sbjct: 121 LWIWGKGDGGRLGF-GQENSVFVPNLNP--LF-----EEHSIRCIALGGLHSVALTHQGD 172
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+FTWG FG LG P +V + +I+ TAAI E E
Sbjct: 173 VFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGE-------- 224
Query: 143 RLWVWGQNQGSNFPRLFW--------GAFTPNTI------ICQVSCGSVHVVALSECGLL 188
L++WG+ +G L G P+ + + VSCG +AL++ G L
Sbjct: 225 -LYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASVSCGGFFTMALTKEGQL 283
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE--KITQVSCGEYHSAAVSEN 246
WG N +LGRG G + V P LE +ITQ++CG YHS A++E
Sbjct: 284 WNWGANSNYELGRGDNLGGWEPMPV-----------PSLEGVRITQIACGGYHSLALTEE 332
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
G+V +WG G GQLG SL++ + +P + AL I +A GG S A+T G L+
Sbjct: 333 GKVLSWGHGGHGQLGSSSLRN---QKVPTEIEALADKKIVFIASGGSSSAAITDGGELWM 389
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 358
WG ++ QLG+ P P E + F P+ V ++ G SH L
Sbjct: 390 WGNAKDFQLGV-PGLPEIQTTPVEVN--FLTEEDECQPHKVISISIGASHAL 438
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 104/372 (27%), Positives = 159/372 (42%), Gaps = 71/372 (19%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQL--------------------QSEFVKSISCG 122
LF+WG GQLG G EE R +P V L S F ISCG
Sbjct: 50 LFSWGRGASGQLGGGIEEIRMYPSPVANLLFRSDQSFSLAQTPGRIDADSSSFRIGISCG 109
Query: 123 AHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPN--------TIIC 170
+ G LW+WG+ G RL +G F PN +I C
Sbjct: 110 LF----------HSGLTIDGDLWIWGKGDGG---RLGFGQENSVFVPNLNPLFEEHSIRC 156
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
++ G +H VAL+ G + WGY +G LG + L RV D++ + KI
Sbjct: 157 -IALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELVPRRV--------DDSWDC-KI 206
Query: 231 TQVSCGEYHSAAVSENGEVYTWGL----GSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
+ ++ H+AA++E+GE+Y WG G +G G +P +V AL + +
Sbjct: 207 SAIATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALT-VPVA 265
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
V+CGG + ALT +G L+ WG + +LG G + +P S R
Sbjct: 266 SVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVR---------- 315
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGG 405
+ +ACG H+L +G++ WG+ +GQ + P+ ++ ++ +A+GG
Sbjct: 316 ITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGG 375
Query: 406 GHSAVLADACSL 417
SA + D L
Sbjct: 376 SSSAAITDGGEL 387
>gi|222619121|gb|EEE55253.1| hypothetical protein OsJ_03147 [Oryza sativa Japonica Group]
Length = 954
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 166/390 (42%), Gaps = 65/390 (16%)
Query: 14 VDNIPAKSAIYVWG------YNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLD- 66
D+I + +YVWG G T + + IPK L ++ LD
Sbjct: 209 TDDIESLGDVYVWGEVWTDVTPSDGHTSSSCSKVDVLIPKPLESDVV----------LDV 258
Query: 67 --IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
IACG H A G +FTWG G+LG GT+ P+ V+ L V ISCG
Sbjct: 259 NQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDLISCGEF 318
Query: 125 CTAAIAEPRE----NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVV 180
T A+ + DG+ + L G P+ G ++ V+CGS H
Sbjct: 319 HTCAVTTSGDLFNWGDGSYNVGLLGC-GTEVSYWLPKKVSGPLEGLQVL-SVACGSWHSA 376
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
+ G L +G +G LG G E L P+ ++ + F K +V+CG +HS
Sbjct: 377 LTTSSGKLYTFGDGTFGVLGHGDR-ETLAYPKEVEALSGF--------KTIKVACGIWHS 427
Query: 241 AAVSE----------NGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDV 288
AA+ E + ++YTWG G +LGH GDKE L+P+ V AL +
Sbjct: 428 AAIVEVTNQTGANVMSKKLYTWGDGDKNRLGH-----GDKEPRLVPKCVQALLEYNFHQL 482
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQT--RSFSLIPNESDTYFRNIPILVVPNG 346
ACG + AL + G ++ G S GQLG P++ + L+ + +
Sbjct: 483 ACGHNMTVALATSGRVFTMGSSSNGQLG-NPKSDGKQPCLVQDR-----------LASEL 530
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
V+ ++CG SH V ++ WG + G+
Sbjct: 531 VEEISCGASHVTVLTSRSEVYTWGMGANGR 560
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 118/268 (44%), Gaps = 37/268 (13%)
Query: 38 GRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDG 97
G E +PK++ L G L +ACG H+A S G L+T+G FG LG G
Sbjct: 345 GTEVSYWLPKKVSGPLEGLQV------LSVACGSWHSALTTSSGKLYTFGDGTFGVLGHG 398
Query: 98 TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG-TISTSRLWVWGQ------N 150
E +P++V+ L ++CG +AAI E G + + +L+ WG
Sbjct: 399 DRETLAYPKEVEALSGFKTIKVACGIWHSAAIVEVTNQTGANVMSKKLYTWGDGDKNRLG 458
Query: 151 QGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGI 203
G PRL P + Q++CG VAL+ G + G + GQLG
Sbjct: 459 HGDKEPRL-----VPKCVQALLEYNFHQLACGHNMTVALATSGRVFTMGSSSNGQLG--- 510
Query: 204 TCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHC 263
P+ + + E + ++SCG H ++ EVYTWG+G+ G+LGH
Sbjct: 511 ------NPKSDGKQPCLVQDRLASELVEEISCGASHVTVLTSRSEVYTWGMGANGRLGHG 564
Query: 264 SLQSGDKELLPRRVVALDGIFIKDVACG 291
L+ K L V AL +K ++CG
Sbjct: 565 DLKDRKKPCL---VEALKDRHVKSISCG 589
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 60/126 (47%), Gaps = 14/126 (11%)
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
+I+CG H + S ++TWG G+LG G + RK P V+ L+ VKSISCG++
Sbjct: 533 EISCGASHVTVLTSRSEVYTWGMGANGRLGHGDLKDRKKPCLVEALKDRHVKSISCGSNF 592
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGS-NFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
T I + WV G +Q R +G FT C +CG VH A S
Sbjct: 593 TTCICIHK-----------WVSGADQSVCTGCRQAFG-FTRKRHDC-YNCGLVHCHACSS 639
Query: 185 CGLLQA 190
+L+A
Sbjct: 640 RKVLKA 645
>gi|149730315|ref|XP_001489590.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Equus
caballus]
Length = 551
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 116/245 (47%), Gaps = 23/245 (9%)
Query: 148 GQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEG 207
G Q + PR + T + C HVV + G + WG+N Y QLG G T G
Sbjct: 81 GDVQSTIEPRRL-DSLTGKKVACLSYGSGPHVVLATSEGEVFTWGHNAYSQLGNGTTNHG 139
Query: 208 LQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQS 267
L + + +++ +V+CG YHS ++ +GEV+ WG + GQ+G S
Sbjct: 140 LVPCHISTNLSN--------KRVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGS---GS 188
Query: 268 GDKELLPRRVV-ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSL 326
+ +PRRV L + ++ACG + S A+ G +Y WG S GQLGLG +
Sbjct: 189 TANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYSGNGQLGLGGSGNQPTP 248
Query: 327 IPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAW 386
+ R VQ ACG++HTLV +G+++ WG NSYGQ +
Sbjct: 249 CRVAALQGIR----------VQRAACGYAHTLVLTDEGQVYVWGANSYGQLGTGNKSNQP 298
Query: 387 YPSPV 391
YP+P+
Sbjct: 299 YPTPI 303
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 131/300 (43%), Gaps = 43/300 (14%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTAAIAEPRENDGTIS 140
+F G N G LG G + P ++ L + V +S G+ H A +E
Sbjct: 67 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLTGKKVACLSYGSGPHVVLATSE--------- 117
Query: 141 TSRLWVWGQNQGSNFPR---------LFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
++ WG N S N + +V+CGS H + L+ G + AW
Sbjct: 118 -GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKRVIEVACGSYHSLVLTSDGEVFAW 176
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
GYN GQ+G G T PR + G + + + ++CG+ S AV + GEVY
Sbjct: 177 GYNNSGQVGSGSTANQ-PIPRRVTG-------CLQNKVVVNIACGQMCSMAVVDTGEVYV 228
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG GQLG L + P RV AL GI ++ ACG H+ LT +G +Y WG +
Sbjct: 229 WGYSGNGQLG---LGGSGNQPTPCRVAALQGIRVQRAACGYAHTLVLTDEGQVYVWGANS 285
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRIHGWG 370
GQLG G N+S+ + I+ +++ AC +HT + G ++ WG
Sbjct: 286 YGQLGTG----------NKSNQPYPTPIIVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 113/243 (46%), Gaps = 39/243 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G +P + L +N R +++ACG H+ + SDG
Sbjct: 120 VFTWGHNAYSQLG-NGTTNHGLVPCHISTNL------SNKRVIEVACGSYHSLVLTSDGE 172
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P +V LQ++ V +I+CG C+ A+ + T
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAV---------VDT 223
Query: 142 SRLWVWGQNQG--------SNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG + N P A + + +CG H + L++ G + WG
Sbjct: 224 GEVYVWGYSGNGQLGLGGSGNQPTPCRVAALQGIRVQRAACGYAHTLVLTDEGQVYVWGA 283
Query: 194 NEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G + + P ++ E ++I ++ +C H SAA ++ G VY
Sbjct: 284 NSYGQLGTGNKSNQPYPTPIIV-----------EKDRIIEIAACHSTHTSAAKTQGGHVY 332
Query: 251 TWG 253
WG
Sbjct: 333 MWG 335
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 78/175 (44%), Gaps = 21/175 (12%)
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHSCALTSK 301
N E++ G G LG +QS + PRR+ +L G K VAC G H TS+
Sbjct: 64 NDEIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLTG---KKVACLSYGSGPHVVLATSE 117
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
G ++ WG + QLG G T + L+P T N ++ V ACG H+LV
Sbjct: 118 GEVFTWGHNAYSQLGNG--TTNHGLVPCHISTNLSNKRVIEV-------ACGSYHSLVLT 168
Query: 362 RDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE--VRKLAAGGGHSAVLADA 414
DG + WGYN+ GQ + + P V C+ V +A G S + D
Sbjct: 169 SDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDT 223
>gi|256077780|ref|XP_002575178.1| ubiquitin ligase [Schistosoma mansoni]
gi|360043621|emb|CCD81167.1| putative hect E3 ubiquitin ligase [Schistosoma mansoni]
Length = 1175
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 121/463 (26%), Positives = 188/463 (40%), Gaps = 105/463 (22%)
Query: 19 AKSAIYVWGYNHSGQ-TGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAV 77
A ++ WG GQ T K Q+ IPK L ++ P + I CG+ HT +
Sbjct: 5 ATEELFAWGSCEEGQLTLDKNDAYQILIPKAL--DVRNLPT-----LIQITCGYTHTVFL 57
Query: 78 ASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG 137
DG +++ G NEF QLG G G+ KV L+ + S++CGA+ AAI
Sbjct: 58 TIDGEVYSCGCNEFQQLGHGQSGGQL--AKVVALEHYRIISVACGAYHNAAIT------- 108
Query: 138 TISTSRLWVWGQNQGSNFPR-------LFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
L+ WG N R A + + ++ QVS G H + L++ + A
Sbjct: 109 --YNGLLFTWGCNSNGQLGREGDDTGVKLVRALSDHKVV-QVSLGVEHTLVLTDTARVFA 165
Query: 191 WGYNEYGQLGRGITCE-GLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
+G N GQLG G + E + P+ I + + ++ G +HS ++ +G +
Sbjct: 166 FGSNLKGQLGLGYSSEQSVSIPQQILCLSGL--------PVRRIVAGGWHSFVLTVSGSL 217
Query: 250 YTWGLGSVGQLG-------------HCSLQSG--------------------DKEL---- 272
Y WG + GQLG +L+ G D L
Sbjct: 218 YAWGSNNYGQLGLSYFGSSPNDHQNELTLKCGSVGSTSVDDEQSKNRPFSPLDTSLSNVS 277
Query: 273 LPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESD 332
+P V L G + +ACG H+ ALT G ++ +G + GQLG T S +P +
Sbjct: 278 IPTFVKTLRGCEVVYLACGETHTVALTRDGGVFTFGAGRYGQLGHNESTIGIS-VPRKIT 336
Query: 333 TYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
+ N+ V +ACG HTL + + GR+ +G + Q + P PV
Sbjct: 337 EFMGNV--------VTQIACGRFHTLALVPKTGRLFAFGQGTNAQLGMGDTKNRLLPCPV 388
Query: 392 D--WC-----------VGE---------VRKLAAGGGHSAVLA 412
W VG +R++ +GG H+ +LA
Sbjct: 389 KGHWVSSHKSSSNESTVGTDSSSSKPYIIRRIFSGGDHTYLLA 431
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 107/233 (45%), Gaps = 27/233 (11%)
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
L AWG E GQL T + +++ K LD L + Q++CG H+ ++ +G
Sbjct: 9 LFAWGSCEEGQL----TLDKNDAYQIL--IPKALD-VRNLPTLIQITCGYTHTVFLTIDG 61
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
EVY+ G QLGH QSG + +VVAL+ I VACG H+ A+T G L+ W
Sbjct: 62 EVYSCGCNEFQQLGHG--QSGGQL---AKVVALEHYRIISVACGAYHNAAITYNGLLFTW 116
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G + GQLG L+ SD + V V+ G HTLV R+
Sbjct: 117 GCNSNGQLGREGDDTGVKLVRALSD------------HKVVQVSLGVEHTLVLTDTARVF 164
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVD-WCVG--EVRKLAAGGGHSAVLADACSL 417
+G N GQ S+ P C+ VR++ AGG HS VL + SL
Sbjct: 165 AFGSNLKGQLGLGYSSEQSVSIPQQILCLSGLPVRRIVAGGWHSFVLTVSGSL 217
>gi|296203907|ref|XP_002806938.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like, partial [Callithrix jacchus]
Length = 4774
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3008 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 3059
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 3060 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 3112
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 3113 LVFSWGDG---DFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3169
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV+++G+VY
Sbjct: 3170 GKGDYFRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDSGQVYA 3220
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3221 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3266
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 2947 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQI-----TALSSYMVKKVAVHSGGRHATA 3001
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+
Sbjct: 3002 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------ 3055
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 3056 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3109
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 3110 DEGLVFSWGDGDFGKLGRG-GSEGCNVPQNI--------ERLNGQGVCQIECGAQFSLAL 3160
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH S K P+ V L G I VA G +H A+T G
Sbjct: 3161 TKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDSGQ 3217
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 3218 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3264
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 143/326 (43%), Gaps = 50/326 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +D+A G H+A V + G
Sbjct: 4000 VYSWGEAEDGKLGHGSRSPCDR------PRVIESLRGVEV--VDVAAGGAHSACVTAAGD 4051
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG E + P+ V+ LQ V I+CG+ + +D T+
Sbjct: 4052 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC--LTDDDTV--- 4106
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 4107 --WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4164
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 4165 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4215
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G + VACG H+ AW S+
Sbjct: 4216 NDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAWSTSKPTS 4263
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPI 340
G P + +P E + + + IPI
Sbjct: 4264 AGKLP-----AQVPMECN-HLQEIPI 4283
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 167/393 (42%), Gaps = 69/393 (17%)
Query: 68 ACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTA 127
A G E TA + + +F WG N+ QLG K P + L + V ++ G+
Sbjct: 2888 AAGLESTATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLF 2945
Query: 128 AIAEPREND--GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
A+ + G + RL + + PR + V G H AL+
Sbjct: 2946 AVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVD 3005
Query: 186 GLLQAWGYNEYGQLGR--GITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
G + +WG + G+LG + C+ PR+I EA + ++I ++CG HSAA+
Sbjct: 3006 GKVFSWGEGDDGKLGHFSRMNCDK---PRLI--------EALKTKRIRDIACGSSHSAAL 3054
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHSCALT 299
+ +GE+YTWGLG G+LGH GD +L P+ V L G + VACG + ALT
Sbjct: 3055 TSSGELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3109
Query: 300 SKGALYAWGGSQAGQLGLG-------PQT---------------RSFSLIPNES------ 331
+G +++WG G+LG G PQ FSL +S
Sbjct: 3110 DEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3169
Query: 332 ------------DTYFRNIPILVVPNGVQLV--ACGHSHTLVYMRDGRIHGWGYNSYGQA 377
D + R ++ G ++V A G H L G+++ WG N +GQ
Sbjct: 3170 GKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQ 3229
Query: 378 ANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
N +T P+ V G+ + ++A G HS
Sbjct: 3230 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3262
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 177/412 (42%), Gaps = 78/412 (18%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P C A A R + + G + AV +DG
Sbjct: 3894 IYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALATLRPVQLIGGEQTLFAVTADG 3944
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 3945 KLYATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSE------- 3997
Query: 139 ISTSRLWVWGQNQGSNFPRLFWGAFTP-----------NTIICQVSCGSVHVVALSECGL 187
++ WG+ + +L G+ +P + V+ G H ++ G
Sbjct: 3998 ---GEVYSWGEAEDG---KLGHGSRSPCDRPRVIESLRGVEVVDVAAGGAHSACVTAAGD 4051
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSE 245
L WG YG+LG + + L+ P+++ EA + ++ ++C G+ + +++
Sbjct: 4052 LYTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVVDIACGSGDAQTLCLTD 4102
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+ V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4103 DDTVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVY 4159
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHT 357
WG +LG G SD + R P VQ +A G H
Sbjct: 4160 TWGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHC 4201
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
+ DG ++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4202 VCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4253
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 135/310 (43%), Gaps = 53/310 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHC 125
+ G +H A++S+G +++WG E G+LG G+ P ++ L+ E V + GAH
Sbjct: 3984 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGVEVVDVAAGGAHS 4043
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCG 175
A L+ WG+ + P+L A + ++ ++CG
Sbjct: 4044 ACVTA----------AGDLYTWGKGRYGRLGHSDSEDQLKPKLV-EALQGHRVV-DIACG 4091
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + L++ + +WG +YG+LGRG +G + P I + +V
Sbjct: 4092 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVKV 4142
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G VYTWG G +LGH S D PR+V L G + +A G +
Sbjct: 4143 ECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSL 4199
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLV 350
H T G +Y WG + GQLG G T P LV V V
Sbjct: 4200 HCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRV 4246
Query: 351 ACGHSHTLVY 360
ACG +HTL +
Sbjct: 4247 ACGSAHTLAW 4256
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 129/285 (45%), Gaps = 45/285 (15%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+L A N + H A+A+ G +++WG + G+LG G + P+ +
Sbjct: 413 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVI 472
Query: 109 KQLQ----SEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT 164
+ V I+CG+ +AAI E L+ WG+ N+ RL G
Sbjct: 473 SAFSGKQAGKHVVHIACGSTYSAAITAEGE---------LYTWGRG---NYXRLDHGRSA 520
Query: 165 PNTIICQV-----------SCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
N I+ + SCG +A E G + +WG +YG+LGRG +G + P
Sbjct: 521 MNEILIMISGLDRQKFIYKSCGIRFAQTLAFYENGQVWSWGDGDYGKLGRG-GSDGCKTP 579
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
++I+ + +V CG S A++++G+VY+WG G +LGH G +E
Sbjct: 580 KLIEKLQDL--------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH-----GTEE 626
Query: 272 LL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ P+ + L G + DVA G H ALT +++WG + Q
Sbjct: 627 HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 671
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 138/338 (40%), Gaps = 26/338 (7%)
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEP 132
T + GT++ WG N GQLG K P + L + V+ I A A+
Sbjct: 3885 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 3944
Query: 133 RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
+ G + + P L V+ G H +ALS G + +WG
Sbjct: 3945 KLYATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4004
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
E G+LG G + PRVI+ ++ V+ G HSA V+ G++YTW
Sbjct: 4005 EAEDGKLGHG-SRSPCDRPRVIESLRGV--------EVVDVAAGGAHSACVTAAGDLYTW 4055
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGS 310
G G G+LGH + +L P+ V AL G + D+ACG + LT +++WG
Sbjct: 4056 GKGRYGRLGH---SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDG 4112
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWG 370
G+LG G +P + D+ + GV V CG ++ + G ++ WG
Sbjct: 4113 DYGKLGRG--GSDGCKVPMKIDS--------LTGLGVVKVECGSQFSVALTKSGAVYTWG 4162
Query: 371 YNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGH 407
Y + + + P V G +V +A G H
Sbjct: 4163 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4200
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 120/275 (43%), Gaps = 25/275 (9%)
Query: 144 LWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGI 203
++ N + P+L G + N + H +AL+ G + +WG + G+LG G
Sbjct: 403 VYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD 462
Query: 204 TCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHC 263
T L+ P+VI ++ + + ++CG +SAA++ GE+YTWG G+ +L H
Sbjct: 463 TVP-LEEPKVISAFSG----KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYXRLDHG 517
Query: 264 SLQSGDKELLPRRVVALDGIFIKDVACG--GVHSCALTSKGALYAWGGSQAGQLGLGPQT 321
+S E+L + LD +CG + A G +++WG G+LG G
Sbjct: 518 --RSAMNEIL-IMISGLDRQKFIYKSCGIRFAQTLAFYENGQVWSWGDGDYGKLGRGGSD 574
Query: 322 --RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAAN 379
++ LI D V V CG ++ +DG+++ WG + +
Sbjct: 575 GCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 622
Query: 380 EKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ YP ++ G +V +AAG H L +
Sbjct: 623 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 657
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 129/293 (44%), Gaps = 33/293 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG G+ G G L PK + G AG + + IACG ++AA
Sbjct: 441 LAATGEVYSWGCGDGGRLGH-GDTVPLEEPKVIS-AFSGKQAGKHV--VHIACGSTYSAA 496
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG + +L G + + L + SCG +A
Sbjct: 497 ITAEGELYTWGRGNYXRLDHGRSAMNEILIMISGLDRQKFIYKSCGIRFAQTLA------ 550
Query: 137 GTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
++W WG R G TP I + +V CGS +AL++ G +
Sbjct: 551 -FYENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQV 609
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG + +LG G T E ++ P++++G + +K+ V+ G H A++E+ E
Sbjct: 610 YSWGKGDNQRLGHG-TEEHVRYPKLLEGL--------QGKKVIDVAAGSTHCLALTEDSE 660
Query: 249 VYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
V++W GS Q H +L+ E P + LD I +ACG S A +S
Sbjct: 661 VHSW--GSNDQCQHFDTLRVTKPE--PAALPGLDTKHIVGIACGPAQSFAWSS 709
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 130/340 (38%), Gaps = 63/340 (18%)
Query: 56 CPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
C AN IAC + ++ +G ++T N P+ V+ L S
Sbjct: 376 CEGLANLGVTQIACAEKRFLILSRNGCVYTQAYNS----------DTLAPQLVQGLASRN 425
Query: 116 VKSISCGA--HCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAF 163
+ I+ + H A+A +T ++ WG G P++ AF
Sbjct: 426 IVKIAAHSDGHHYLALA---------ATGEVYSWGCGDGGRLGHGDTVPLEEPKVI-SAF 475
Query: 164 TPNTI---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF 220
+ + ++CGS + A++ G L WG Y +L G R
Sbjct: 476 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYXRLDHG---------RSAMNEILI 526
Query: 221 LDEAPELEKITQVSCGEY--HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
+ + +K SCG + A ENG+V++WG G G+LG D P+ +
Sbjct: 527 MISGLDRQKFIYKSCGIRFAQTLAFYENGQVWSWGDGDYGKLGR---GGSDGCKTPKLIE 583
Query: 279 ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
L + + V CG S ALT G +Y+WG +LG G ++ + R
Sbjct: 584 KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG------------TEEHVRYP 631
Query: 339 PILVVPNGVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+L G ++ VA G +H L D +H WG N Q
Sbjct: 632 KLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 671
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 119/272 (43%), Gaps = 39/272 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGAN-SRWLDIACG--HEH 73
I A+ +Y WG +G +L + E+ +G + +++ +CG
Sbjct: 497 ITAEGELYTWG---------RGNYXRLDHGRSAMNEILIMISGLDRQKFIYKSCGIRFAQ 547
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
T A +G +++WG ++G+LG G +G K P+ +++LQ V + CG+ + A+ +
Sbjct: 548 TLAFYENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTK-- 605
Query: 134 ENDGTISTSRLWVWGQNQG--------SNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
DG + + W G NQ +P+L G I V+ GS H +AL+E
Sbjct: 606 --DGQVYS---WGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVI--DVAAGSTHCLALTED 658
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
+ +WG N+ C+ RV K L + + I ++CG S A S
Sbjct: 659 SEVHSWGSND--------QCQHFDTLRVTKPEPAAL-PGLDTKHIVGIACGPAQSFAWSS 709
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV 277
E ++ GL + CS+ +LL R+V
Sbjct: 710 CSE-WSIGLRVPFVVDICSMTFEQLDLLLRQV 740
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG + G G + +R P+Q+ + + IA G H DG
Sbjct: 4157 AVYTWGKGDYHRLGH-GSDDHVRRPRQVQ-------GLQGKKVIAIATGSLHCVCCTEDG 4208
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
++TWG N+ GQLGDGT + P V LQ + V ++CG+ T A
Sbjct: 4209 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4255
>gi|260832820|ref|XP_002611355.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
gi|229296726|gb|EEN67365.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
Length = 1187
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 152/326 (46%), Gaps = 53/326 (16%)
Query: 51 PELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQ 110
P L + + + + G +H A++S+G +F+WG E G+LG G P ++
Sbjct: 378 PTLLESIQHVHIKKVAVNSGGKHCLALSSEGEVFSWGEAEDGKLGHGNRNSCDRPRVIES 437
Query: 111 LQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPN 166
L+ + V I+ G +A I ST L+ WG+ + + RL G P
Sbjct: 438 LRGKEVVDIAAGGAHSACIT---------STGELFTWGKGR---YGRLGHGDSEDQMKPK 485
Query: 167 TI-------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGY 217
+ + V+CGS + +++ + +WG +YG+LGRG +G + P+ +
Sbjct: 486 LVEALKGVRVIDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRG-GSDGCKIPQKV--- 541
Query: 218 AKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV 277
EA + + +V CG S A++++G VYTWG G +LGH S D PR+V
Sbjct: 542 -----EALIGQGVVKVECGSQFSVALTKSGCVYTWGKGDYHRLGH---GSDDHVRRPRKV 593
Query: 278 VALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRN 337
AL G + +A G +H A T +G ++ WG + GQLG G S S IP
Sbjct: 594 AALQGKNVISIATGSLHCVACTDQGEVFTWGDNDEGQLGDG----STSAIPR-------- 641
Query: 338 IPILVVP---NGVQLVACGHSHTLVY 360
P LV + VACG +H+L +
Sbjct: 642 -PRLVAALQGKKINRVACGSAHSLAW 666
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 147/342 (42%), Gaps = 50/342 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ ++ ++ WG G+ G R R P + G +DIA G H+A
Sbjct: 404 LSSEGEVFSWGEAEDGKLGHGNRNSCDR------PRVIESLRGKEV--VDIAAGGAHSAC 455
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ S G LFTWG +G+LG G E + P+ V+ L+ V ++CG+ +
Sbjct: 456 ITSTGELFTWGKGRYGRLGHGDSEDQMKPKLVEALKGVRVIDVACGSGDAQTLC------ 509
Query: 137 GTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
+W WG R G P + + +V CGS VAL++ G +
Sbjct: 510 -ITDDDSVWSWGDGDYGKLGRGGSDGCKIPQKVEALIGQGVVKVECGSQFSVALTKSGCV 568
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG +Y +LG G + + ++ PR + A + + + ++ G H A ++ GE
Sbjct: 569 YTWGKGDYHRLGHG-SDDHVRRPRKVA--------ALQGKNVISIATGSLHCVACTDQGE 619
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
V+TWG GQLG S + + PR V AL G I VACG HS AW
Sbjct: 620 VFTWGDNDEGQLGDGSTSAIPR---PRLVAALQGKKINRVACGSAHS---------LAWS 667
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
S+ G P +P E + + +NI + V+ N + L+
Sbjct: 668 TSKPVNAGKLPVQ-----VPMEYN-HLQNITMPVLRNRLVLL 703
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 113/247 (45%), Gaps = 29/247 (11%)
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
V+ G H +ALS G + +WG E G+LG G PRVI E+ +++
Sbjct: 394 VNSGGKHCLALSSEGEVFSWGEAEDGKLGHG-NRNSCDRPRVI--------ESLRGKEVV 444
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVA 289
++ G HSA ++ GE++TWG G G+LGH GD E + P+ V AL G+ + DVA
Sbjct: 445 DIAAGGAHSACITSTGELFTWGKGRYGRLGH-----GDSEDQMKPKLVEALKGVRVIDVA 499
Query: 290 CGG--VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
CG + +T ++++WG G+LG G IP + + ++ GV
Sbjct: 500 CGSGDAQTLCITDDDSVWSWGDGDYGKLGRG--GSDGCKIPQKVEA--------LIGQGV 549
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGG 406
V CG ++ + G ++ WG Y + + + P V G+ V +A G
Sbjct: 550 VKVECGSQFSVALTKSGCVYTWGKGDYHRLGHGSDDHVRRPRKVAALQGKNVISIATGSL 609
Query: 407 HSAVLAD 413
H D
Sbjct: 610 HCVACTD 616
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 90/192 (46%), Gaps = 22/192 (11%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
K V+ G H A+S GEV++WG G+LGH + S D+ PR + +L G + D+
Sbjct: 390 KKVAVNSGGKHCLALSSEGEVFSWGEAEDGKLGHGNRNSCDR---PRVIESLRGKEVVDI 446
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGV 347
A GG HS +TS G L+ WG + G+LG G D+ + P LV GV
Sbjct: 447 AAGGAHSACITSTGELFTWGKGRYGRLGHG-------------DSEDQMKPKLVEALKGV 493
Query: 348 QL--VAC--GHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLA 402
++ VAC G + TL D + WG YG+ S P V+ +G+ V K+
Sbjct: 494 RVIDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKIPQKVEALIGQGVVKVE 553
Query: 403 AGGGHSAVLADA 414
G S L +
Sbjct: 554 CGSQFSVALTKS 565
>gi|383319179|ref|YP_005380020.1| Alpha-tubulin suppressor and related RCC1 domain-containing protein
[Methanocella conradii HZ254]
gi|379320549|gb|AFC99501.1| Alpha-tubulin suppressor and related RCC1 domain-containing protein
[Methanocella conradii HZ254]
Length = 453
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 146/308 (47%), Gaps = 45/308 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N G+ G E P Q+ AG + + I+ H A+ DGT
Sbjct: 101 VWGWGDNEFGELGDGTNEETSLEPVQV--------AGLHDI-IAISTSGTHCLALRRDGT 151
Query: 83 LFTWGANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
++ WG N GQLG GT EG P +V L +K IS G C+ AI + DG
Sbjct: 152 VWAWGWNVAGQLGIGTTSEGEYTPVQVPGLSD--IKIISAGYQCSMAI----DKDG---- 201
Query: 142 SRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNE 195
RLW WG N G+ RL+ + +I + H +AL + G + AWG+N+
Sbjct: 202 -RLWAWGSNGRGKLGDGTTITRLYPIQVPIDDVIDVAASEGAHTLALKKDGTVWAWGWNQ 260
Query: 196 YGQLG--RGITCEGLQ---GPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
+LG G + ++ P ++KG ++ + VS + +S A+ +G V+
Sbjct: 261 ENELGFVSGSSVNSVKECHTPVMVKG----------VDSVVSVSTTDSNSIALRSDGTVW 310
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
WG G G+LG+ +L D P++V L+ + +A G H A+T G++YAWG +
Sbjct: 311 IWGNGQQGRLGNGALYGADSAT-PQQVPGLENVVA--IAGGSAHIMAMTGDGSVYAWGDN 367
Query: 311 QAGQLGLG 318
Q GQ+G G
Sbjct: 368 QGGQIGNG 375
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 143/325 (44%), Gaps = 47/325 (14%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCGAHC 125
++ G+ + +DGT++ WG NEFG+LGDGT EE P +V L S S G HC
Sbjct: 85 VSAGNFFVLFLKNDGTVWGWGDNEFGELGDGTNEETSLEPVQVAGLHDIIAISTS-GTHC 143
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNF--PRLFWGAFTPNTI-----ICQVSCGSVH 178
A DGT+ W WG N G +TP + I +S G
Sbjct: 144 LA-----LRRDGTV-----WAWGWNVAGQLGIGTTSEGEYTPVQVPGLSDIKIISAGYQC 193
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE- 237
+A+ + G L AWG N G+LG G T L +V ++ + V+ E
Sbjct: 194 SMAIDKDGRLWAWGSNGRGKLGDGTTITRLYPIQV------------PIDDVIDVAASEG 241
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGD--KEL-LPRRVVALDGIFIKDVACGGVH 294
H+ A+ ++G V+ WG +LG S S + KE P V +D + V+ +
Sbjct: 242 AHTLALKKDGTVWAWGWNQENELGFVSGSSVNSVKECHTPVMVKGVDSVV--SVSTTDSN 299
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGH 354
S AL S G ++ WG Q G+LG G + S P + +P L V +A G
Sbjct: 300 SIALRSDGTVWIWGNGQQGRLGNGALYGADSATPQQ-------VPGL---ENVVAIAGGS 349
Query: 355 SHTLVYMRDGRIHGWGYNSYGQAAN 379
+H + DG ++ WG N GQ N
Sbjct: 350 AHIMAMTGDGSVYAWGDNQGGQIGN 374
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 116/267 (43%), Gaps = 43/267 (16%)
Query: 113 SEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQG--SNFPRLFWGAFTPNTI-- 168
S V +I G H + A+ ++DGT+ WG G N + F+ + TP +
Sbjct: 29 SSKVVAIDAGGHLSLAL----KDDGTVM-----AWGTMMGFLPNRGKPFFQSSTPVVVNI 79
Query: 169 --ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPE 226
+ VS G+ V+ L G + WG NE+G+LG G E P + G
Sbjct: 80 TDVSAVSAGNFFVLFLKNDGTVWGWGDNEFGELGDGTNEETSLEPVQVAG---------- 129
Query: 227 LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
L I +S H A+ +G V+ WG GQLG + G E P +V L IK
Sbjct: 130 LHDIIAISTSGTHCLALRRDGTVWAWGWNVAGQLGIGTTSEG--EYTPVQVPGLSD--IK 185
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPN 345
++ G S A+ G L+AWG + G+LG G T R PI V + +
Sbjct: 186 IISAGYQCSMAIDKDGRLWAWGSNGRGKLGDGT-------------TITRLYPIQVPIDD 232
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYN 372
+ + A +HTL +DG + WG+N
Sbjct: 233 VIDVAASEGAHTLALKKDGTVWAWGWN 259
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 107/249 (42%), Gaps = 39/249 (15%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ + G +AL + G + AWG + G +G F P +
Sbjct: 32 VVAIDAGGHLSLALKDDGTVMAWGT--------------MMGFLPNRGKPFFQSSTPVVV 77
Query: 229 KITQVSC---GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFI 285
IT VS G + + +G V+ WG G+LG + + + L P +V L I
Sbjct: 78 NITDVSAVSAGNFFVLFLKNDGTVWGWGDNEFGELGDGTNE--ETSLEPVQVAGLHDIIA 135
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
++ G H AL G ++AWG + AGQLG+G + E + +P L +
Sbjct: 136 --ISTSGTHCLALRRDGTVWAWGWNVAGQLGIGTTS--------EGEYTPVQVPGL---S 182
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYP--SPVDWCVGEVRKLAA 403
+++++ G+ ++ +DGR+ WG N G+ + + YP P+D +V +AA
Sbjct: 183 DIKIISAGYQCSMAIDKDGRLWAWGSNGRGKLGDGTTITRLYPIQVPID----DVIDVAA 238
Query: 404 G-GGHSAVL 411
G H+ L
Sbjct: 239 SEGAHTLAL 247
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 22/102 (21%)
Query: 276 RVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYF 335
+VVA+D GG S AL G + AWG +PN +F
Sbjct: 31 KVVAID--------AGGHLSLALKDDGTVMAWG-------------TMMGFLPNRGKPFF 69
Query: 336 RN-IPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
++ P++V V V+ G+ L DG + GWG N +G+
Sbjct: 70 QSSTPVVVNITDVSAVSAGNFFVLFLKNDGTVWGWGDNEFGE 111
>gi|38346811|emb|CAD41378.2| OSJNBa0088A01.18 [Oryza sativa Japonica Group]
gi|125591414|gb|EAZ31764.1| hypothetical protein OsJ_15916 [Oryza sativa Japonica Group]
Length = 1041
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 170/374 (45%), Gaps = 59/374 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLD---IACGHEHTAAVAS 79
+++WG G + IPK LP L G +++ LD IACG H A +
Sbjct: 232 VFLWGSVLGSMLGSED------IPKSLP-RLVG-----SAKMLDVQSIACGENHAAIITK 279
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE----N 135
G ++TWG+ G+L P+ V+ L S VK+++ G+ T AI E
Sbjct: 280 QGEVYTWGSYSSGRLDQKVNVNASCPKMVESLASVHVKAVAFGSKHTCAITVSGELFEWG 339
Query: 136 DGTISTSRLWVW-GQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
+G S + W G+NQ FP F G N + +++CG H ++ G L +G
Sbjct: 340 EGAHSLGLMNDWYGRNQW--FPHKFLGPMD-NISVSKIACGEWHTAIITSSGQLFTYGDG 396
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE--------- 245
+G LG G T +G+ P+ + E+ + ++ V+CG +H+AA+ E
Sbjct: 397 TFGVLGHGDT-QGVARPKEV--------ESLKGSRVKSVACGPWHTAAIVEVMSSFKGNA 447
Query: 246 -NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
+G+++TWG G+LGH + +LLP V +L + V+CG + LT G +
Sbjct: 448 PSGKLFTWGDADRGKLGHADRK---MKLLPTCVDSLTAYDLIQVSCGTAVTVVLTVTGMV 504
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNES--DTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
+ G S+ GQLG P+ S+ E T F V+ ++ G SH V
Sbjct: 505 FTIGSSRHGQLG-NPKADGESICSVEGPLKTEF-----------VREISSGSSHVAVLTM 552
Query: 363 DGRIHGWGYNSYGQ 376
G++ WG + GQ
Sbjct: 553 SGKVFTWGKGAEGQ 566
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 120/246 (48%), Gaps = 31/246 (12%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
IACG HTA + S G LFT+G FG LG G +G P++V+ L+ VKS++CG T
Sbjct: 374 IACGEWHTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESLKGSRVKSVACGPWHT 433
Query: 127 AAIAEPREN-DGTISTSRLWVWGQ---------NQGSNFPRLFWGAFTPNTIICQVSCGS 176
AAI E + G + +L+ WG ++ + T +I QVSCG+
Sbjct: 434 AAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSLTAYDLI-QVSCGT 492
Query: 177 VHVVALSECGLLQAWGYNEYGQLGR----GITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
V L+ G++ G + +GQLG G + ++GP + E + +
Sbjct: 493 AVTVVLTVTGMVFTIGSSRHGQLGNPKADGESICSVEGPL-------------KTEFVRE 539
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
+S G H A ++ +G+V+TWG G+ GQLG L P V AL+G ++ V CG
Sbjct: 540 ISSGSSHVAVLTMSGKVFTWGKGAEGQLG---LGDYSNRSSPTLVEALEGRDVESVVCGF 596
Query: 293 VHSCAL 298
+ A+
Sbjct: 597 NFTAAI 602
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 35/215 (16%)
Query: 211 PRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK 270
PR++ G AK LD + ++CGE H+A +++ GEVYTWG S G+L +
Sbjct: 253 PRLV-GSAKMLD-------VQSIACGENHAAIITKQGEVYTWGSYSSGRLDQ---KVNVN 301
Query: 271 ELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNE 330
P+ V +L + +K VA G H+CA+T G L+ WG A LGL
Sbjct: 302 ASCPKMVESLASVHVKAVAFGSKHTCAITVSGELFEWGEG-AHSLGL------------M 348
Query: 331 SDTYFRNI--------PILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKS 382
+D Y RN P+ + V +ACG HT + G++ +G ++G + +
Sbjct: 349 NDWYGRNQWFPHKFLGPMDNI--SVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDT 406
Query: 383 TYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACS 416
P V+ G V+ +A G H+A + + S
Sbjct: 407 QGVARPKEVESLKGSRVKSVACGPWHTAAIVEVMS 441
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%)
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
+I+ G H A + G +FTWG GQLG G R P V+ L+ V+S+ CG +
Sbjct: 539 EISSGSSHVAVLTMSGKVFTWGKGAEGQLGLGDYSNRSSPTLVEALEGRDVESVVCGFNF 598
Query: 126 TAAI 129
TAAI
Sbjct: 599 TAAI 602
>gi|456888932|gb|EMF99869.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
borgpetersenii str. 200701203]
Length = 482
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 169/395 (42%), Gaps = 94/395 (23%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHC 125
++ G H+ + +G ++T G N FGQLG G G ++ + + +L S + SI +
Sbjct: 107 LSAGGAHSGFL-KNGEVYTVGRNNFGQLGTGNSTGDENNDVIVKLNSISNIFSIHFNQNN 165
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQ------GSNF-----PRLFWGAFTPNTIICQV-- 172
+ AIA+ R++ WG N G+N PR G P T++ +
Sbjct: 166 SMAIAK---------NGRVYTWGNNAKGQLGIGNNNTNPANPRAA-GNRQPPTLVPGIND 215
Query: 173 ----SCGSVHVVALSECGLLQAWGYNEYGQLGRG---ITCEGL-QGPRVIKGYAKFLDEA 224
+ G H + L G + A+G N GQLG G + + P + G
Sbjct: 216 AVMGAYGFNHALILKSDGTVVAFGQNNVGQLGNGANDLNADSFSMDPVAVVG-------- 267
Query: 225 PELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK-ELLPRRVVALDGI 283
L + QV G HSAA++ENGEVY WG G LG+ L + + + P +V L G
Sbjct: 268 --LSDVIQVIAGSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAIQSTPVKVEGLSG- 324
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQ----------------------- 320
IK +A G H AL S G +Y+WG + +GQLG+G
Sbjct: 325 -IKQIANGRDHILALASNGRIYSWGLNASGQLGIGGNGSPNPTPNPTQILNITNASSVWA 383
Query: 321 --TRSFSLIPN------------------ESDT---YFRNIPILVVPNGVQLVACGHSHT 357
T+SFS++ N E++T Y N ++ + N + CG +H
Sbjct: 384 GGTQSFSILKNGEVKGWGANGNTANLAIGETNTLKVYEPNKAVVGIDNVIHF-GCGATHN 442
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKSTYAW-YPSPV 391
+ DG I+GWG+N G + W P+PV
Sbjct: 443 FALLGDGEIYGWGWNFKGSLGRQDLQANWGAPNPV 477
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 130/322 (40%), Gaps = 49/322 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPK----QLPPELFGCPAGANSRWLDIACGHE 72
I +Y WG N GQ G P+ + PP L G N + A G
Sbjct: 169 IAKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLV---PGINDAVMG-AYGFN 224
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHP---EKVKQLQSEFVKSISCGAHCTAAI 129
H + SDGT+ +G N GQLG+G + + V + V + G+ +AA+
Sbjct: 225 HALILKSDGTVVAFGQNNVGQLGNGANDLNADSFSMDPVAVVGLSDVIQVIAGSEHSAAL 284
Query: 130 AEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAF-----TPNTI-----ICQVSCGSVHV 179
E E ++VWG+NQ N A TP + I Q++ G H+
Sbjct: 285 TENGE---------VYVWGRNQYGNLGNGRLSAANAIQSTPVKVEGLSGIKQIANGRDHI 335
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
+AL+ G + +WG N GQLG G G P + L+ + + V G
Sbjct: 336 LALASNGRIYSWGLNASGQLGIG----GNGSPNPTPNPTQILN----ITNASSVWAGGTQ 387
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLP-----RRVVALDGIFIKDVACGGVH 294
S ++ +NGEV WG +L G+ L + VV +D + CG H
Sbjct: 388 SFSILKNGEVKGWGANG----NTANLAIGETNTLKVYEPNKAVVGIDNVI--HFGCGATH 441
Query: 295 SCALTSKGALYAWGGSQAGQLG 316
+ AL G +Y WG + G LG
Sbjct: 442 NFALLGDGEIYGWGWNFKGSLG 463
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 109/274 (39%), Gaps = 56/274 (20%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + + +G N+ GQ G + P + G S + + G EH+AA
Sbjct: 229 LKSDGTVVAFGQNNVGQLGNGANDLNADSFSMDPVAVVGL-----SDVIQVIAGSEHSAA 283
Query: 77 VASDGTLFTWGANEFGQLGDGTEEG----RKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
+ +G ++ WG N++G LG+G + P KV+ L +K I+ G A+A
Sbjct: 284 LTENGEVYVWGRNQYGNLGNGRLSAANAIQSTPVKVEGLSG--IKQIANGRDHILALA-- 339
Query: 133 RENDGTISTSRLWVWGQN---------QGSNFPRLFWGAFTPN-TIICQVS------CGS 176
S R++ WG N GS P TPN T I ++ G
Sbjct: 340 -------SNGRIYSWGLNASGQLGIGGNGSPNP-------TPNPTQILNITNASSVWAGG 385
Query: 177 VHVVALSECGLLQAWGYNEYG---QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
++ + G ++ WG N +G T + + + + G ++ +
Sbjct: 386 TQSFSILKNGEVKGWGANGNTANLAIGETNTLKVYEPNKAVVG----------IDNVIHF 435
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQS 267
CG H+ A+ +GE+Y WG G LG LQ+
Sbjct: 436 GCGATHNFALLGDGEIYGWGWNFKGSLGRQDLQA 469
>gi|449522972|ref|XP_004168499.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Cucumis
sativus]
Length = 806
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 159/373 (42%), Gaps = 69/373 (18%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
I+ WG G+ G G E + PK + +G N +ACG HT AV G
Sbjct: 311 IFSWGEESGGRLGH-GVEADVSHPK-----IIDTLSGTNVEL--VACGEYHTCAVTLSGD 362
Query: 83 LFTWG--ANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAHCTAAIAEPRE----N 135
L+TWG + +G LG G+E P+KV Q++ V ISCGA TA + +
Sbjct: 363 LYTWGDGTHNYGLLGHGSEVSHWIPQKVSGQMEGIRVSYISCGAWHTAVVTSAGQLFTFG 422
Query: 136 DGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-------LSECGL- 187
DG+ G + SNFPR T +V+CG H A LS+ G
Sbjct: 423 DGSFGA---LGHGDHITSNFPREVETLRGLRTT--KVACGVWHTAAAVEAINELSDSGTS 477
Query: 188 -------LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
L WG + G+LG G PR++ L E E+I QV+CG +
Sbjct: 478 ASPSSRKLYTWGDGDKGRLGHGD-----NEPRLVPECVAALME----ERICQVACGNDLT 528
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHSCALT 299
A++ G VYT G + GQLG + LP V + F+++VACG H LT
Sbjct: 529 VALTTAGRVYTMGSTAYGQLGSATANGK----LPTCVEGEIANSFVEEVACGSYHVAVLT 584
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV---VPNGVQLVACGHSH 356
SK +Y WG GQLG G D RN P +V V+ VACG
Sbjct: 585 SKNEVYTWGKGLNGQLGHG-------------DNNHRNTPTIVDVLKDKQVKNVACGSKF 631
Query: 357 TLVYMRDGRIHGW 369
T+V IH W
Sbjct: 632 TVVIC----IHKW 640
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 110/372 (29%), Positives = 163/372 (43%), Gaps = 58/372 (15%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
IACG H V G +F+WG G+LG G E HP+ + L V+ ++CG + T
Sbjct: 295 IACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDTLSGTNVELVACGEYHT 354
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGA----FTPNTI--------ICQVSC 174
A+ T+S L+ WG N+ L G+ + P + + +SC
Sbjct: 355 CAV--------TLS-GDLYTWGDGT-HNYGLLGHGSEVSHWIPQKVSGQMEGIRVSYISC 404
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRG--IT------CEGLQGPRVIKGYAKFLDEAPE 226
G+ H ++ G L +G +G LG G IT E L+G R K A
Sbjct: 405 GAWHTAVVTSAGQLFTFGDGSFGALGHGDHITSNFPREVETLRGLRTTKVACGVWHTAAA 464
Query: 227 LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIF 284
+E I ++S + ++A + ++YTWG G G+LGH GD E L+P V AL
Sbjct: 465 VEAINELS--DSGTSASPSSRKLYTWGDGDKGRLGH-----GDNEPRLVPECVAALMEER 517
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-- 342
I VACG + ALT+ G +Y G + GQLG S T +P V
Sbjct: 518 ICQVACGNDLTVALTTAGRVYTMGSTAYGQLG--------------SATANGKLPTCVEG 563
Query: 343 -VPNG-VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVR 399
+ N V+ VACG H V ++ WG GQ + + + P+ VD +V+
Sbjct: 564 EIANSFVEEVACGSYHVAVLTSKNEVYTWGKGLNGQLGHGDNNHRNTPTIVDVLKDKQVK 623
Query: 400 KLAAGGGHSAVL 411
+A G + V+
Sbjct: 624 NVACGSKFTVVI 635
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 23/184 (12%)
Query: 247 GEVYTWGLGS--------VGQLG-HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
G+VY WG G V ++G CSL S LLP+ + + + + +ACGG H+
Sbjct: 245 GDVYIWGEGIGDGLLGGGVNKVGSQCSLNSKLDALLPKALESTVVLDVHGIACGGRHAVL 304
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT 357
+T +G +++WG G+LG G E+D I + V+LVACG HT
Sbjct: 305 VTRQGEIFSWGEESGGRLGHGV----------EADVSHPKIIDTLSGTNVELVACGEYHT 354
Query: 358 LVYMRDGRIHGW--GYNSYGQAANEKSTYAWYPSPVDWCVGEVR--KLAAGGGHSAVLAD 413
G ++ W G ++YG + W P V + +R ++ G H+AV+
Sbjct: 355 CAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVSGQMEGIRVSYISCGAWHTAVVTS 414
Query: 414 ACSL 417
A L
Sbjct: 415 AGQL 418
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 76/176 (43%), Gaps = 31/176 (17%)
Query: 18 PAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAV 77
P+ +Y WG G+ G E +L PE A R +ACG++ T A+
Sbjct: 480 PSSRKLYTWGDGDKGRLGHGDNE------PRLVPECVA--ALMEERICQVACGNDLTVAL 531
Query: 78 ASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAHCTAAIAEPREND 136
+ G ++T G+ +GQLG T G K P V+ ++ + FV+ ++CG++ A + E
Sbjct: 532 TTAGRVYTMGSTAYGQLGSATANG-KLPTCVEGEIANSFVEEVACGSYHVAVLTSKNE-- 588
Query: 137 GTISTSRLWVWGQ----------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVAL 182
++ WG+ N N P + + + V+CGS V +
Sbjct: 589 -------VYTWGKGLNGQLGHGDNNHRNTPTIV--DVLKDKQVKNVACGSKFTVVI 635
>gi|429859855|gb|ELA34615.1| ran exchange factor prp20 pim1 [Colletotrichum gloeosporioides Nara
gc5]
Length = 672
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 118/440 (26%), Positives = 184/440 (41%), Gaps = 75/440 (17%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
IYV+G SG+ G + + ++ P L + + IACG H AA+ D
Sbjct: 228 IYVFGEGSSGELGLGSKHKPKKVTDVKRPRLNPFLDAKDVGVVQIACGGMHAAALTKDNK 287
Query: 83 LFTWGANEFGQLG-----------------------DGTEEGRKHPEKVKQL----QSEF 115
+ TWG N+ G LG G P V +++F
Sbjct: 288 ILTWGVNDQGALGRETTWEGGVRDVDDEEDEENDEDSGVNPRESTPTAVDSTHFAPEAKF 347
Query: 116 VKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSN----FPRLFWGAFTPNTI--- 168
+ ++ + T A+ E DG R++ WG + S+ F TP I
Sbjct: 348 TQVVASDS-ATFALTE----DG-----RVYGWGTFRSSDGILGFTEKISIQMTPMFIPSL 397
Query: 169 --ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIK--GYAKFLDEA 224
I ++ GS H++AL G + AWG + QLGR RVI+ A + ++
Sbjct: 398 KNITALAAGSNHILALDNKGTVLAWGCGQQNQLGR----------RVIERNKLASLVPQS 447
Query: 225 PELEK--ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVAL 280
L K I +++CG YHS A+ ++G V+ WGL + + G S D ++ P V +L
Sbjct: 448 MGLPKNRINRIACGSYHSFAMDKDGVVWAWGLNNFAETGISSGAGEDDAVILRPTIVESL 507
Query: 281 DGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLG-PQTRSFSLIPNESDTYFRNIP 339
IK +A G HS A T KG L WG Q+G+ + + +I +ES +N
Sbjct: 508 KDYKIKHIAGGEHHSLACTEKGQLLTWGRLDGHQVGIPIEELDAEDVIKDES----QNPR 563
Query: 340 ILVVPNGVQ------LVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDW 393
IL P V+ VA G + + G H WG+++ Q + P+ +D
Sbjct: 564 ILSKPTIVEDVANCVFVAAGVDNNIAVDSKGIAHSWGFSANYQTGQGTTDDIETPTTIDN 623
Query: 394 CVGEVRKL--AAGGGHSAVL 411
+ +K+ A GG +VL
Sbjct: 624 SAVKDKKIIFAGAGGQYSVL 643
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 90/229 (39%), Gaps = 49/229 (21%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K + WG Q GR+ ER L P+ G P +R IACG H+ A+
Sbjct: 416 KGTVLAWGCGQQNQLGRRVIERNKL--ASLVPQSMGLPKNRINR---IACGSYHSFAMDK 470
Query: 80 DGTLFTWGANEFGQLGDGTEEGRK-----HPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
DG ++ WG N F + G + G P V+ L+ +K I+ G H + A E
Sbjct: 471 DGVVWAWGLNNFAETGISSGAGEDDAVILRPTIVESLKDYKIKHIAGGEHHSLACTE--- 527
Query: 135 NDGTISTSRLWVWGQNQG-------------------SNFPRLFWGAFTPNTII------ 169
+L WG+ G S PR+ + TI+
Sbjct: 528 ------KGQLLTWGRLDGHQVGIPIEELDAEDVIKDESQNPRI----LSKPTIVEDVANC 577
Query: 170 CQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYA 218
V+ G + +A+ G+ +WG++ Q G+G T + ++ P I A
Sbjct: 578 VFVAAGVDNNIAVDSKGIAHSWGFSANYQTGQG-TTDDIETPTTIDNSA 625
>gi|220916168|ref|YP_002491472.1| chromosome condensation regulator RCC1 [Anaeromyxobacter
dehalogenans 2CP-1]
gi|219954022|gb|ACL64406.1| regulator of chromosome condensation RCC1 [Anaeromyxobacter
dehalogenans 2CP-1]
Length = 717
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 175/398 (43%), Gaps = 85/398 (21%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTA 75
+ A + + WG N SGQ G + + I P+ P ++ PA + + +A G HT
Sbjct: 207 VKADGSAWTWGSNTSGQLG----DGSIAITPRTTPVQVL--PASSAAD---VAAGAAHTV 257
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
+ SDG+L WGAN GQLGDGT GR+ P + V I+ A+ TAA+
Sbjct: 258 VLRSDGSLLAWGANGDGQLGDGTTTGRRTPVA---MGFGGVVQIAATANHTAAL----RA 310
Query: 136 DGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
DGT LW G N+ + +L G F + QV+ GS H+ A++ G
Sbjct: 311 DGT-----LWTCGANE---YGQLGDGTFASRSAFTRIGSGFAQVAAGSRHMAAIATDGSR 362
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
AWG +++GQ G G +V G+A+ V+ G HS V +G
Sbjct: 363 WAWGNDDFGQAGDGSWSRSAVATQVGSGFAR-------------VAAGFGHSLGVKTDGT 409
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD-GIFIKDVACGGVHSCALTSKGALYAW 307
++ WGL +G Q+GD P+R + G +VA G HS A+ + G L++W
Sbjct: 410 LWGWGLNDLG-------QAGDGTDAPQRGAPIRIGEGFAEVAAGYQHSLAVAADGTLWSW 462
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFR-----------------------------NI 338
G + +GQLG+ + +F P + + F +
Sbjct: 463 GSNFSGQLGV--PSIAFRSTPGQIGSGFAHAAAGRWHSAGVKTDGTLWLWGGDVSGSFDT 520
Query: 339 PILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
P+ V +G VA GH HT+ DG + WG N +GQ
Sbjct: 521 PVQ-VGSGFVEVAAGHEHTVALAEDGTLWTWGNNLFGQ 557
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 136/326 (41%), Gaps = 60/326 (18%)
Query: 64 WLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA 123
W I+ H+ A+A DGTL+ WG N GQLGDGT R P ++ S + G
Sbjct: 46 WARISAPASHSVAIAKDGTLWAWGDNASGQLGDGTFVDRATPVRI----GTGFASAAAGT 101
Query: 124 HCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHV---- 179
T A+ + DGT LW WG N G Q+ G V
Sbjct: 102 GYTLAV----KADGT-----LWSWGDNASGQLGD---GTTILRAAPVQIGTGFAQVAASR 149
Query: 180 -------VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
+A+ G L AWG N GQ+G G + ++ G+ T+
Sbjct: 150 NWLQPVSLAIKTDGTLWAWGSNRNGQVGDGSGLDQHAPVQIGTGF-------------TR 196
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRR--VVALDGIFIKDVAC 290
++ G++H+AAV +G +TWG + GQLG S+ + PR V L DVA
Sbjct: 197 IAVGDWHAAAVKADGSAWTWGSNTSGQLGDGSI-----AITPRTTPVQVLPASSAADVAA 251
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
G H+ L S G+L AWG + GQLG G T R P+ + GV +
Sbjct: 252 GAAHTVVLRSDGSLLAWGANGDGQLGDGTTTG-------------RRTPVAMGFGGVVQI 298
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQ 376
A +HT DG + G N YGQ
Sbjct: 299 AATANHTAALRADGTLWTCGANEYGQ 324
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 116/419 (27%), Positives = 160/419 (38%), Gaps = 110/419 (26%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I ++ WG N SGQ G + + P + + + A G +T A
Sbjct: 59 IAKDGTLWAWGDNASGQLGDG-----TFVDRATPVRI-------GTGFASAAAGTGYTLA 106
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V +DGTL++WG N GQLGDGT R P ++ ++ S + + AI + D
Sbjct: 107 VKADGTLWSWGDNASGQLGDGTTILRAAPVQIGTGFAQVAASRNWLQPVSLAI----KTD 162
Query: 137 GTISTSRLWVWGQNQ------------------GSNFPRL-----------------FWG 161
GT LW WG N+ G+ F R+ WG
Sbjct: 163 GT-----LWAWGSNRNGQVGDGSGLDQHAPVQIGTGFTRIAVGDWHAAAVKADGSAWTWG 217
Query: 162 ------------AFTPNTIICQV---------SCGSVHVVALSECGLLQAWGYNEYGQLG 200
A TP T QV + G+ H V L G L AWG N GQLG
Sbjct: 218 SNTSGQLGDGSIAITPRTTPVQVLPASSAADVAAGAAHTVVLRSDGSLLAWGANGDGQLG 277
Query: 201 RGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQL 260
G T G + P V G+ + Q++ H+AA+ +G ++T G GQL
Sbjct: 278 DG-TTTGRRTP-VAMGFG----------GVVQIAATANHTAALRADGTLWTCGANEYGQL 325
Query: 261 GHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQ 320
GD R G VA G H A+ + G+ +AWG GQ G G
Sbjct: 326 -------GDGTFASRSAFTRIGSGFAQVAAGSRHMAAIATDGSRWAWGNDDFGQAGDG-- 376
Query: 321 TRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAAN 379
++ R+ V +G VA G H+L DG + GWG N GQA +
Sbjct: 377 ------------SWSRSAVATQVGSGFARVAAGFGHSLGVKTDGTLWGWGLNDLGQAGD 423
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 162/365 (44%), Gaps = 72/365 (19%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ ++ WG N GQ G G + R G P + ++A G++H+ A
Sbjct: 404 VKTDGTLWGWGLNDLGQAG-DGTDAPQR----------GAPIRIGEGFAEVAAGYQHSLA 452
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
VA+DGTL++WG+N GQLG + R P Q+ S F + + H + D
Sbjct: 453 VAADGTLWSWGSNFSGQLGVPSIAFRSTP---GQIGSGFAHAAAGRWHSAGV-----KTD 504
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI---ICQVSCGSVHVVALSECGLLQAWGY 193
GT LW+WG + +F TP + +V+ G H VAL+E G L WG
Sbjct: 505 GT-----LWLWGGDVSGSFD-------TPVQVGSGFVEVAAGHEHTVALAEDGTLWTWGN 552
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL--EKITQVSCGEYHSAAVSENGEVYT 251
N +GQL C+G RV AP T VS G YH+ A+ +G ++
Sbjct: 553 NLFGQL-----CDGTLDQRV----------APVQVGTGFTHVSAGAYHTMAMKADGTLWA 597
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
G GQLG + S +E+L V L G F V+ G H+ A+ + G +++WG
Sbjct: 598 CGENGAGQLGDGTTTS--REVL----VGLGGGFAA-VSAGETHTVAIKADGTVWSWGSGI 650
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGY 371
G+L G F +R+ P V Q+ A SHTL+ DG + +G
Sbjct: 651 RGELADG----GFG---------WRSAPAQVGAGAAQVAAG-GSHTLIVKADGTLWSFGQ 696
Query: 372 NSYGQ 376
+++GQ
Sbjct: 697 SAFGQ 701
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 148/366 (40%), Gaps = 61/366 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I ++ WG N +GQ G G P Q+ + + IA G H AA
Sbjct: 159 IKTDGTLWAWGSNRNGQVG-DGSGLDQHAPVQI-----------GTGFTRIAVGDWHAAA 206
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V +DG+ +TWG+N GQLGDG+ V+ L + ++ GA T + +D
Sbjct: 207 VKADGSAWTWGSNTSGQLGDGSIAITPRTTPVQVLPASSAADVAAGAAHTVVL----RSD 262
Query: 137 GTISTSRLWVWGQN-QGSNFPRLFWGAFTPNTI----ICQVSCGSVHVVALSECGLLQAW 191
G+ L WG N G G TP + + Q++ + H AL G L
Sbjct: 263 GS-----LLAWGANGDGQLGDGTTTGRRTPVAMGFGGVVQIAATANHTAALRADGTLWTC 317
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G NEYGQLG G R+ G+A QV+ G H AA++ +G +
Sbjct: 318 GANEYGQLGDGTFASRSAFTRIGSGFA-------------QVAAGSRHMAAIATDGSRWA 364
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALD-GIFIKDVACGGVHSCALTSKGALYAWGGS 310
WG GQ G S R VA G VA G HS + + G L+ WG +
Sbjct: 365 WGNDDFGQAGDGSWS--------RSAVATQVGSGFARVAAGFGHSLGVKTDGTLWGWGLN 416
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWG 370
GQ G G +D R PI + G VA G+ H+L DG + WG
Sbjct: 417 DLGQAGDG------------TDAPQRGAPIR-IGEGFAEVAAGYQHSLAVAADGTLWSWG 463
Query: 371 YNSYGQ 376
N GQ
Sbjct: 464 SNFSGQ 469
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 121/447 (27%), Positives = 176/447 (39%), Gaps = 123/447 (27%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++ WG N GQ G G R P + FG + IA HTAA+ +DG
Sbjct: 264 SLLAWGANGDGQLG-DGTTTGRRTPVAMG---FGGV-------VQIAATANHTAALRADG 312
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP--------- 132
TL+T GANE+GQLGDGT R ++ S F + ++ G+ AAIA
Sbjct: 313 TLWTCGANEYGQLGDGTFASR---SAFTRIGSGFAQ-VAAGSRHMAAIATDGSRWAWGND 368
Query: 133 ---RENDGTISTS---------------------------RLWVWGQNQ------GSNFP 156
+ DG+ S S LW WG N G++ P
Sbjct: 369 DFGQAGDGSWSRSAVATQVGSGFARVAAGFGHSLGVKTDGTLWGWGLNDLGQAGDGTDAP 428
Query: 157 RLFWGAFTPNTI---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLG------------- 200
+ GA P I +V+ G H +A++ G L +WG N GQLG
Sbjct: 429 QR--GA--PIRIGEGFAEVAAGYQHSLAVAADGTLWSWGSNFSGQLGVPSIAFRSTPGQI 484
Query: 201 --------------RGITCEG---LQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
G+ +G L G V F +V+ G H+ A+
Sbjct: 485 GSGFAHAAAGRWHSAGVKTDGTLWLWGGDV---SGSFDTPVQVGSGFVEVAAGHEHTVAL 541
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+E+G ++TWG GQL +L D+ + P +V G V+ G H+ A+ + G
Sbjct: 542 AEDGTLWTWGNNLFGQLCDGTL---DQRVAPVQV----GTGFTHVSAGAYHTMAMKADGT 594
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 363
L+A G + AGQLG G T L+ + G V+ G +HT+ D
Sbjct: 595 LWACGENGAGQLGDGTTTSREVLVG--------------LGGGFAAVSAGETHTVAIKAD 640
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSP 390
G + WG G+ A+ + W +P
Sbjct: 641 GTVWSWGSGIRGELADGG--FGWRSAP 665
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 107/232 (46%), Gaps = 40/232 (17%)
Query: 54 FGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS 113
F P S ++++A GHEHT A+A DGTL+TWG N FGQL DGT + R P Q+ +
Sbjct: 518 FDTPVQVGSGFVEVAAGHEHTVALAEDGTLWTWGNNLFGQLCDGTLDQRVAP---VQVGT 574
Query: 114 EFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTII---- 169
F +S GA+ T A+ + DGT LW G+N G T ++
Sbjct: 575 GFTH-VSAGAYHTMAM----KADGT-----LWACGENGAGQLGD---GTTTSREVLVGLG 621
Query: 170 ---CQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPE 226
VS G H VA+ G + +WG G+L G G+ A
Sbjct: 622 GGFAAVSAGETHTVAIKADGTVWSWGSGIRGELADG-------------GFGWRSAPAQV 668
Query: 227 LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
QV+ G H+ V +G ++++G + GQLG ++ + L+P RVV
Sbjct: 669 GAGAAQVAAGGSHTLIVKADGTLWSFGQSAFGQLGDGTVSA----LVPVRVV 716
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 117/294 (39%), Gaps = 72/294 (24%)
Query: 164 TPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDE 223
TP ++S + H VA+++ G L AWG N GQLG G + R+ G+A
Sbjct: 41 TPAVEWARISAPASHSVAIAKDGTLWAWGDNASGQLGDGTFVDRATPVRIGTGFAS---- 96
Query: 224 APELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSL------------------ 265
+ G ++ AV +G +++WG + GQLG +
Sbjct: 97 ---------AAAGTGYTLAVKADGTLWSWGDNASGQLGDGTTILRAAPVQIGTGFAQVAA 147
Query: 266 ---------------------------QSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
Q GD L + G +A G H+ A+
Sbjct: 148 SRNWLQPVSLAIKTDGTLWAWGSNRNGQVGDGSGLDQHAPVQIGTGFTRIAVGDWHAAAV 207
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHT 357
+ G+ + WG + +GQLG G S ++ P R P+ V+P + VA G +HT
Sbjct: 208 KADGSAWTWGSNTSGQLGDG----SIAITP-------RTTPVQVLPASSAADVAAGAAHT 256
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
+V DG + WG N GQ + +T +PV G V ++AA H+A L
Sbjct: 257 VVLRSDGSLLAWGANGDGQLGDGTTTG--RRTPVAMGFGGVVQIAATANHTAAL 308
>gi|449442447|ref|XP_004138993.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101222790 [Cucumis sativus]
Length = 982
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 110/372 (29%), Positives = 163/372 (43%), Gaps = 58/372 (15%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
IACG H V G +F+WG G+LG G E HP+ + L V+ ++CG + T
Sbjct: 295 IACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDTLSGTNVELVACGEYHT 354
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGA----FTPNTI--------ICQVSC 174
A+ T+S L+ WG N+ L G+ + P + + +SC
Sbjct: 355 CAV--------TLS-GDLYTWGDGT-HNYGLLGHGSEVSHWIPQKVGGQMEGIRVSYISC 404
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRG--IT------CEGLQGPRVIKGYAKFLDEAPE 226
G+ H ++ G L +G +G LG G IT E L+G R K A
Sbjct: 405 GAWHTAVVTSAGQLFTFGDGSFGALGHGDHITSNFPREVETLRGLRTTKVACGVWHTAAA 464
Query: 227 LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIF 284
+E I ++S + ++A + ++YTWG G G+LGH GD E L+P V AL
Sbjct: 465 VEAINELS--DSGTSASPSSRKLYTWGDGDKGRLGH-----GDNEPRLVPECVAALIEER 517
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-- 342
I VACG + ALT+ G +Y G + GQLG S T +P V
Sbjct: 518 ICQVACGNDLTVALTTAGRVYTMGSTAYGQLG--------------SATANGKLPTCVEG 563
Query: 343 -VPNG-VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVR 399
+ N V+ VACG H V ++ WG GQ + + + P+ VD +V+
Sbjct: 564 EIANSFVEEVACGSYHVAVLTSKNEVYTWGKGLNGQLGHGDNNHRNTPTIVDVLKDKQVK 623
Query: 400 KLAAGGGHSAVL 411
+A G + V+
Sbjct: 624 NVACGSKFTVVI 635
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 159/373 (42%), Gaps = 69/373 (18%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
I+ WG G+ G G E + PK + +G N +ACG HT AV G
Sbjct: 311 IFSWGEESGGRLGH-GVEADVSHPK-----IIDTLSGTNVEL--VACGEYHTCAVTLSGD 362
Query: 83 LFTWG--ANEFGQLGDGTEEGRKHPEKV-KQLQSEFVKSISCGAHCTAAIAEPRE----N 135
L+TWG + +G LG G+E P+KV Q++ V ISCGA TA + +
Sbjct: 363 LYTWGDGTHNYGLLGHGSEVSHWIPQKVGGQMEGIRVSYISCGAWHTAVVTSAGQLFTFG 422
Query: 136 DGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-------LSECGL- 187
DG+ G + SNFPR T +V+CG H A LS+ G
Sbjct: 423 DGSFGA---LGHGDHITSNFPREVETLRGLRTT--KVACGVWHTAAAVEAINELSDSGTS 477
Query: 188 -------LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
L WG + G+LG G PR++ L E E+I QV+CG +
Sbjct: 478 ASPSSRKLYTWGDGDKGRLGHGD-----NEPRLVPECVAALIE----ERICQVACGNDLT 528
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHSCALT 299
A++ G VYT G + GQLG + LP V + F+++VACG H LT
Sbjct: 529 VALTTAGRVYTMGSTAYGQLGSATANGK----LPTCVEGEIANSFVEEVACGSYHVAVLT 584
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV---VPNGVQLVACGHSH 356
SK +Y WG GQLG G D RN P +V V+ VACG
Sbjct: 585 SKNEVYTWGKGLNGQLGHG-------------DNNHRNTPTIVDVLKDKQVKNVACGSKF 631
Query: 357 TLVYMRDGRIHGW 369
T+V IH W
Sbjct: 632 TVVIC----IHKW 640
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 23/184 (12%)
Query: 247 GEVYTWGLGS--------VGQLG-HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
G+VY WG G V ++G CSL S LLP+ + + + + +ACGG H+
Sbjct: 245 GDVYIWGEGIGDGLLGGGVNKVGSQCSLNSKLDALLPKALESTVVLDVHGIACGGRHAVL 304
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT 357
+T +G +++WG G+LG G E+D I + V+LVACG HT
Sbjct: 305 VTRQGEIFSWGEESGGRLGHGV----------EADVSHPKIIDTLSGTNVELVACGEYHT 354
Query: 358 LVYMRDGRIHGW--GYNSYGQAANEKSTYAWYPSPVDWCVGEVR--KLAAGGGHSAVLAD 413
G ++ W G ++YG + W P V + +R ++ G H+AV+
Sbjct: 355 CAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVGGQMEGIRVSYISCGAWHTAVVTS 414
Query: 414 ACSL 417
A L
Sbjct: 415 AGQL 418
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 76/176 (43%), Gaps = 31/176 (17%)
Query: 18 PAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAV 77
P+ +Y WG G+ G E +L PE A R +ACG++ T A+
Sbjct: 480 PSSRKLYTWGDGDKGRLGHGDNE------PRLVPECVA--ALIEERICQVACGNDLTVAL 531
Query: 78 ASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAHCTAAIAEPREND 136
+ G ++T G+ +GQLG T G K P V+ ++ + FV+ ++CG++ A + E
Sbjct: 532 TTAGRVYTMGSTAYGQLGSATANG-KLPTCVEGEIANSFVEEVACGSYHVAVLTSKNE-- 588
Query: 137 GTISTSRLWVWGQ----------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVAL 182
++ WG+ N N P + + + V+CGS V +
Sbjct: 589 -------VYTWGKGLNGQLGHGDNNHRNTPTIV--DVLKDKQVKNVACGSKFTVVI 635
>gi|402901988|ref|XP_003913913.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Papio anubis]
gi|355754693|gb|EHH58594.1| hypothetical protein EGM_08474 [Macaca fascicularis]
Length = 556
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 112/227 (49%), Gaps = 22/227 (9%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H+V + G + WG+N Y QLG G T GL ++ + +++ +V+CG
Sbjct: 115 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSN--------KQVIEVACGS 166
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHSC 296
YHS ++ +GEV+ WG + GQ+G S + +PRRV L + +ACG +
Sbjct: 167 YHSLVLTSDGEVFAWGYNNSGQVGS---GSTVNQPIPRRVTGCLQNKVVVTIACGQMCCM 223
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G +Y WG + GQLGLG + + R VQ VACG++H
Sbjct: 224 AVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR----------VQRVACGYAH 273
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 403
TLV +G+++ WG NSYGQ + YP+PV + ++AA
Sbjct: 274 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA 320
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 135/303 (44%), Gaps = 49/303 (16%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTAAIAEPRENDGTIS 140
+F G N G LG G + P ++ L + + S+S G+ H A E
Sbjct: 72 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTE--------- 122
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVS------------CGSVHVVALSECGLL 188
++ WG N + +L G + CQ+S CGS H + L+ G +
Sbjct: 123 -GEVFTWGHNA---YSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEV 178
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
AWGYN GQ+G G T PR + G + + + ++CG+ AV + GE
Sbjct: 179 FAWGYNNSGQVGSGSTVNQ-PIPRRVTG-------CLQNKVVVTIACGQMCCMAVVDTGE 230
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
VY WG GQLG L S + P RV AL GI ++ VACG H+ LT +G +YAWG
Sbjct: 231 VYVWGYNGNGQLG---LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 287
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRIH 367
+ GQLG G N+S+ + + +++ AC +HT + G ++
Sbjct: 288 ANSYGQLGTG----------NKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVY 337
Query: 368 GWG 370
WG
Sbjct: 338 MWG 340
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 114/243 (46%), Gaps = 39/243 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G +P Q+ L +N + +++ACG H+ + SDG
Sbjct: 125 VFTWGHNAYSQLG-NGTTNHGLVPCQISTNL------SNKQVIEVACGSYHSLVLTSDGE 177
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P +V LQ++ V +I+CG C A+ + T
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAV---------VDT 228
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N N P A + +V+CG H + L++ G + AWG
Sbjct: 229 GEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 288
Query: 194 NEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G + + P + E ++I ++ +C H SAA ++ G VY
Sbjct: 289 NSYGQLGTGNKSNQSYPTPVTV-----------EKDRIIEIAACHSTHTSAAKTQGGHVY 337
Query: 251 TWG 253
WG
Sbjct: 338 MWG 340
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 72/151 (47%), Gaps = 13/151 (8%)
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG-GVHSCALTSKGAL 304
N E++ G G LG +QS + PRR+ +L G I ++ G G H T++G +
Sbjct: 69 NDEIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEV 125
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 364
+ WG + QLG G T + L+P + T N ++ V ACG H+LV DG
Sbjct: 126 FTWGHNAYSQLGNG--TTNHGLVPCQISTNLSNKQVIEV-------ACGSYHSLVLTSDG 176
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 395
+ WGYN+ GQ + + P V C+
Sbjct: 177 EVFAWGYNNSGQVGSGSTVNQPIPRRVTGCL 207
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 18/150 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G Q P A R +ACG+ HT + +G
Sbjct: 231 VYVWGYNGNGQLGLGSSGNQ--------PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 282
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WGAN +GQLG G + + +P V + ++ +C + T+A
Sbjct: 283 VYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSA--------AKTQGG 334
Query: 143 RLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 335 HVYMWGQCRGQSVILPHLTHFSCTDDVFAC 364
>gi|440907021|gb|ELR57214.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Bos grunniens
mutus]
Length = 4874
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 128/430 (29%), Positives = 194/430 (45%), Gaps = 60/430 (13%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
MD + T+RP D ++ K +Y+WG GQ GR + +P P
Sbjct: 3978 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMVPAAAP--------- 4026
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
+ S+ + CG T + ++GT+ G +G+LG G + + LQ V +
Sbjct: 4027 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQL 4086
Query: 120 --SCGAH-CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI---- 168
SCG+ + A+ E E ++ WG ++ +L G P I
Sbjct: 4087 VTSCGSDGHSMALTESGE---------VFSWGDG---DYGKLGHGNSDRQRRPRQIEALQ 4134
Query: 169 ---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV--IKGYAKFLDE 223
+ Q+SCG H ++ G L +G +YG+LG G T RV ++GY
Sbjct: 4135 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQAR 4194
Query: 224 APELEKITQVSCGEYHSAAVSENGE-VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG 282
L QV+CG H+ AVS +G V+ +G G G+LG L + + P++V L G
Sbjct: 4195 NNTL-FFLQVACGLNHTLAVSADGSMVWAFGDGDYGKLG---LGNSTAKSSPQKVDVLCG 4250
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL- 341
I IK VACG S ALT G +Y +G Q +GL P+ R+ + + IP+L
Sbjct: 4251 IGIKKVACGTQFSVALTKDGHVYTFG--QDRLIGL-PEGRA------RNHNRPQQIPVLA 4301
Query: 342 -VVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VR 399
VV ++ VA G HTL G ++ WG NS GQ + + P+ V G+ VR
Sbjct: 4302 GVV---IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVR 4358
Query: 400 KLAAGGGHSA 409
+++AG HSA
Sbjct: 4359 QISAGRCHSA 4368
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 181/405 (44%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ PK P + S I G T +++DG+
Sbjct: 372 VYVWGSNSSHQLVEGTQEKILQ-PKLAP---------SFSDAQTIEAGQYCTFVISTDGS 421
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG----T 138
+ G +G+LG G + +K+L E +SI ++ + +DG
Sbjct: 422 VRACGKGSYGRLGLGDSNNQS---TLKKLTFEPHRSIK-------KVSSSKGSDGHTLAF 471
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ ++ WG + +P+L G ++C VS G H A++E G L
Sbjct: 472 TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGEL 530
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G P ++K ++ + +VSCG H+ A+S++G
Sbjct: 531 YTWGEGDFGRLGHG-DSNSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 579
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ + AL G+FI+ V G S ALTS G +Y
Sbjct: 580 TVWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVY 634
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V ++ G SH L D
Sbjct: 635 AWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-ISIGDSHCLALSHDNE 683
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 684 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 728
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV DG
Sbjct: 477 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVTEDGE 529
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 530 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 580
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P I I +V GS +AL+ G + AW
Sbjct: 581 -VWSFG---GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 636
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I +S G+ H A+S + EVY
Sbjct: 637 GCG--ACLGCGSSEATALRPKLIEELAA--------TRIVDISIGDSHCLALSHDNEVYA 686
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDGI I+ ++ G HS A T+
Sbjct: 687 WGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 733
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 37 KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGD 96
+GR R P+Q+P A D+A G EHT A+AS G ++ WG+N GQLG
Sbjct: 4285 EGRARNHNRPQQIP-------VLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL 4337
Query: 97 GTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
G + P V LQ + V+ IS G +AA P
Sbjct: 4338 GHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTAP 4373
>gi|297722325|ref|NP_001173526.1| Os03g0599600 [Oryza sativa Japonica Group]
gi|255674682|dbj|BAH92254.1| Os03g0599600, partial [Oryza sativa Japonica Group]
Length = 91
Score = 115 bits (287), Expect = 7e-23, Method: Composition-based stats.
Identities = 56/72 (77%), Positives = 63/72 (87%)
Query: 394 CVGEVRKLAAGGGHSAVLADACSLKELCEFRLAESVTLSNASEIEDVASRTGSEALARLC 453
CVGEVR+LAAGGGHSAVL DACSLKELCEF+LAE+V +SNA IEDVASRTG +ALARLC
Sbjct: 4 CVGEVRRLAAGGGHSAVLTDACSLKELCEFKLAETVNMSNALLIEDVASRTGGDALARLC 63
Query: 454 ERLREHSLHGDE 465
E+LREH + E
Sbjct: 64 EKLREHLVEQGE 75
>gi|357137056|ref|XP_003570117.1| PREDICTED: uncharacterized protein LOC100825305 isoform 2
[Brachypodium distachyon]
Length = 940
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 154/327 (47%), Gaps = 42/327 (12%)
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
+++CG +H A V G +F+WG + G+LG G HP+ ++ L VK+I+ GA
Sbjct: 207 NVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKVSVGVLHPKIIESLAFTHVKAIAFGAKH 266
Query: 126 TAAIAEPRE----NDGTISTSRLWVW-GQNQGSN-FPRLFWGAFTPNTIICQVSCGSVHV 179
T A+A E +GT S L VW Q Q S +P +G +++ +++CG H
Sbjct: 267 TCALAISGELFEWGEGTHS---LGVWDDQCQRSQWYPHKLFGPLEGVSVV-KMACGQWHT 322
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
+S G L +G +G LG G T + P+ ++ ++ V+CG +H
Sbjct: 323 AIISSSGQLFTYGDGTFGVLGHGDT-SSVARPKEVESLKGL--------RVKAVACGPWH 373
Query: 240 SAAVSE----------NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+AA+ E +G+++TWG G+LGH +S +L+P V AL V+
Sbjct: 374 TAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKES---KLVPTCVKALTDSDFAQVS 430
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
C + ALT G ++ G + GQLG S L D+ ++ + V+
Sbjct: 431 CAKALTVALTITGVVFTIGSKEHGQLG------SHRL----DDSSICSVEGPLKTEFVRE 480
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
++ G SH V +G++ WG + GQ
Sbjct: 481 ISSGSSHVAVLTMNGKVFTWGKGTEGQ 507
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 127/262 (48%), Gaps = 31/262 (11%)
Query: 50 PPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK 109
P +LFG G + + +ACG HTA ++S G LFT+G FG LG G P++V+
Sbjct: 300 PHKLFGPLEGVSV--VKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGDTSSVARPKEVE 357
Query: 110 QLQSEFVKSISCGAHCTAAIAEPRENDGTISTS----RLWVWGQ---------NQGSNFP 156
L+ VK+++CG TAAI E GT+ ++ +L+ WG ++ S
Sbjct: 358 SLKGLRVKAVACGPWHTAAIVEIL---GTVKSNAPSGKLFTWGDADRGKLGHSDKESKLV 414
Query: 157 RLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKG 216
A T ++ QVSC VAL+ G++ G E+GQLG R+
Sbjct: 415 PTCVKALT-DSDFAQVSCAKALTVALTITGVVFTIGSKEHGQLG---------SHRLDDS 464
Query: 217 YAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRR 276
++ + E + ++S G H A ++ NG+V+TWG G+ GQLG L + P
Sbjct: 465 SICSVEGPLKTEFVREISSGSSHVAVLTMNGKVFTWGKGTEGQLG---LGNYVDRSSPTL 521
Query: 277 VVALDGIFIKDVACGGVHSCAL 298
V AL+ + +ACG + A+
Sbjct: 522 VEALEDKQVDSIACGSNFTVAV 543
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 93/197 (47%), Gaps = 17/197 (8%)
Query: 221 LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL 280
L + ++ + VSCGE H+A V++ GEV++WG G+LGH + L P+ + +L
Sbjct: 196 LLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGH---KVSVGVLHPKIIESL 252
Query: 281 DGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLG---PQTRSFSLIPNESDTYFRN 337
+K +A G H+CAL G L+ WG G LG Q + P++
Sbjct: 253 AFTHVKAIAFGAKHTCALAISGELFEWG---EGTHSLGVWDDQCQRSQWYPHKLFGPLEG 309
Query: 338 IPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG- 396
+ ++ +ACG HT + G++ +G ++G + ++ P V+ G
Sbjct: 310 VSVV-------KMACGQWHTAIISSSGQLFTYGDGTFGVLGHGDTSSVARPKEVESLKGL 362
Query: 397 EVRKLAAGGGHSAVLAD 413
V+ +A G H+A + +
Sbjct: 363 RVKAVACGPWHTAAIVE 379
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%)
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
+I+ G H A + +G +FTWG GQLG G R P V+ L+ + V SI+CG++
Sbjct: 480 EISSGSSHVAVLTMNGKVFTWGKGTEGQLGLGNYVDRSSPTLVEALEDKQVDSIACGSNF 539
Query: 126 TAAIAEPRENDG 137
T A+ R G
Sbjct: 540 TVAVCLHRSISG 551
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 77/178 (43%), Gaps = 23/178 (12%)
Query: 248 EVYTWG--LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+++ WG LGSV S + LPR + + + +++V+CG H+ +T +G ++
Sbjct: 169 DIFVWGDVLGSVLDDRDTSKANVS---LPRLLNSTQILDVQNVSCGEKHAAIVTKQGEVF 225
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
+WG G+LG ES + V+ +A G HT G
Sbjct: 226 SWGKEDGGRLGHKVSVGVLHPKIIESLAF----------THVKAIAFGAKHTCALAISGE 275
Query: 366 IHGW--GYNSYGQAANEKSTYAWYPS----PVDWCVGEVRKLAAGGGHSAVLADACSL 417
+ W G +S G ++ WYP P++ V K+A G H+A+++ + L
Sbjct: 276 LFEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEGV--SVVKMACGQWHTAIISSSGQL 331
>gi|344298015|ref|XP_003420690.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Loxodonta africana]
Length = 4838
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 3009 VTVEGKVYACGEATNGRLGLGLSSGTVPIPRQI-----TALSSYVVKKVAVHSGGRHATA 3063
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AAI
Sbjct: 3064 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT------ 3117
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 3118 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3171
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 3172 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 3222
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH S K P+ V L G I VA G +H A+T G
Sbjct: 3223 TKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDAGQ 3279
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 3280 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3326
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 134/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3070 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAAITSSGE 3121
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 3122 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 3174
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 3175 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3231
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV++ G+VY
Sbjct: 3232 GKGDYFRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDAGQVYA 3282
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3283 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3328
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 144/327 (44%), Gaps = 50/327 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +D+A G H+A V + G
Sbjct: 4064 VYSWGEAEDGKLGHGNRSPCDR------PRVVESLRGIEV--VDVAAGGAHSACVTAAGD 4115
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG E + P+ V+ LQ V I+CG+ + +D T+
Sbjct: 4116 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC--LTDDDTV--- 4170
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 4171 --WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4228
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 4229 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4279
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G + VACG H+ AW S+
Sbjct: 4280 NDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAWSTSKPTS 4327
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPIL 341
G P + +P E + + + IP++
Sbjct: 4328 TGKLP-----AQVPMEYN-HLQEIPMI 4348
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 130/276 (47%), Gaps = 25/276 (9%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N + P+L G + N I H +AL+ G + +WG + G+LG G
Sbjct: 472 RVYTQAYNSDALAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG 531
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P+VI ++ + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 532 DTVP-LEEPKVISAFSG----KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 586
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + E++P V L G+ + DVACG + A+T G +++WG G+LG G
Sbjct: 587 ---GSSEDEVIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 643
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D V V CG ++ +DG+++ WG +
Sbjct: 644 DGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 691
Query: 379 NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ + YP ++ G +V +AAG H L +
Sbjct: 692 HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 166/393 (42%), Gaps = 69/393 (17%)
Query: 68 ACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTA 127
A G E A + + +F WG N+ QLG K P + L + V ++ G+
Sbjct: 2950 AAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLF 3007
Query: 128 AIAEPREND--GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
A+ + G + RL + + PR + V G H AL+
Sbjct: 3008 AVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVD 3067
Query: 186 GLLQAWGYNEYGQLGR--GITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
G + +WG + G+LG + C+ PR+I EA + ++I ++CG HSAA+
Sbjct: 3068 GKVFSWGEGDDGKLGHFSRMNCDK---PRLI--------EALKTKRIRDIACGSSHSAAI 3116
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHSCALT 299
+ +GE+YTWGLG G+LGH GD +L P+ V L G + VACG + ALT
Sbjct: 3117 TSSGELYTWGLGEYGRLGH-----GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3171
Query: 300 SKGALYAWGGSQAGQLGLG-------PQT---------------RSFSLIPNES------ 331
+G +++WG G+LG G PQ FSL +S
Sbjct: 3172 DEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3231
Query: 332 ------------DTYFRNIPILVVPNGVQLV--ACGHSHTLVYMRDGRIHGWGYNSYGQA 377
D + R ++ G ++V A G H L G+++ WG N +GQ
Sbjct: 3232 GKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQ 3291
Query: 378 ANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
N +T P+ V G+ + ++A G HS
Sbjct: 3292 GNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3324
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 174/411 (42%), Gaps = 76/411 (18%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P C A A R + + G + AV +DG
Sbjct: 3958 IYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALAALRPVQLIGGEQTLFAVTADG 4008
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 4009 KLYATGYGAGGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSSE------- 4061
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG+ + PR+ + V+ G H ++ G L
Sbjct: 4062 ---GEVYSWGEAEDGKLGHGNRSPCDRPRVVESLR--GIEVVDVAAGGAHSACVTAAGDL 4116
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSEN 246
WG YG+LG + + L+ P+++ EA + ++ ++C G+ + ++++
Sbjct: 4117 YTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVVDIACGSGDAQTLCLTDD 4167
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4168 DTVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 4224
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTL 358
WG +LG G SD + R P VQ +A G H +
Sbjct: 4225 WGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCV 4266
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
DG ++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4267 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4317
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 134/310 (43%), Gaps = 53/310 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHC 125
+ G +H A++S+G +++WG E G+LG G P V+ L+ E V + GAH
Sbjct: 4048 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDVAAGGAHS 4107
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCG 175
A L+ WG+ + P+L A + ++ ++CG
Sbjct: 4108 ACVTA----------AGDLYTWGKGRYGRLGHSDSEDQLKPKLV-EALQGHRVV-DIACG 4155
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + L++ + +WG +YG+LGRG +G + P I + +V
Sbjct: 4156 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVKV 4206
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G VYTWG G +LGH S D PR+V L G + +A G +
Sbjct: 4207 ECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSL 4263
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLV 350
H T G +Y WG + GQLG G T P LV V V
Sbjct: 4264 HCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRV 4310
Query: 351 ACGHSHTLVY 360
ACG +HTL +
Sbjct: 4311 ACGSAHTLAW 4320
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 45/285 (15%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+L A N + H A+A+ G +++WG + G+LG G + P+ +
Sbjct: 483 LAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVI 542
Query: 109 KQLQ----SEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT 164
+ V I+CG+ +AAI E L+ WG+ N+ RL G+
Sbjct: 543 SAFSGKQAGKHVVHIACGSTYSAAITAEGE---------LYTWGRG---NYGRLGHGSSE 590
Query: 165 PNTI-----------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
I + V+CGS +A++E G + +WG +YG+LGRG +G + P
Sbjct: 591 DEVIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTP 649
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
++I+ + +V CG S A++++G+VY+WG G +LGH G +E
Sbjct: 650 KLIEKLQDL--------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH-----GTEE 696
Query: 272 LL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ P+ + L G + DVA G H ALT +++WG + Q
Sbjct: 697 HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 136/293 (46%), Gaps = 33/293 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG G+ G G L PK + G AG + + IACG ++AA
Sbjct: 511 LAATGEVYSWGCGDGGRLGH-GDTVPLEEPKVIS-AFSGKQAGKHV--VHIACGSTYSAA 566
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E P V L+ V ++CG+ +A
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEVIPVLVAGLKGLKVIDVACGSGDAQTLA------ 620
Query: 137 GTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
++W WG R G TP I + +V CGS +AL++ G +
Sbjct: 621 -VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQV 679
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG + +LG G T E ++ P++++G + +K+ V+ G H A++E+ E
Sbjct: 680 YSWGKGDNQRLGHG-TEEHVRYPKLLEGL--------QGKKVIDVAAGSTHCLALTEDSE 730
Query: 249 VYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
V++W GS Q H +L+ E P + LD I +ACG S A +S
Sbjct: 731 VHSW--GSNDQCQHFDTLRVTKPE--PSALPGLDTKHIVGIACGPAQSFAWSS 779
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 137/338 (40%), Gaps = 26/338 (7%)
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEP 132
T + GT++ WG N GQLG K P + L + V+ I A A+
Sbjct: 3949 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADG 4008
Query: 133 RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
+ G + + P L V+ G H +ALS G + +WG
Sbjct: 4009 KLYATGYGAGGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4068
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
E G+LG G PRV++ ++ V+ G HSA V+ G++YTW
Sbjct: 4069 EAEDGKLGHG-NRSPCDRPRVVESLRGI--------EVVDVAAGGAHSACVTAAGDLYTW 4119
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGS 310
G G G+LGH + +L P+ V AL G + D+ACG + LT +++WG
Sbjct: 4120 GKGRYGRLGH---SDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDG 4176
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWG 370
G+LG G +P + D+ + GV V CG ++ + G ++ WG
Sbjct: 4177 DYGKLGRG--GSDGCKVPMKIDS--------LTGLGVVKVECGSQFSVALTKSGAVYTWG 4226
Query: 371 YNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGH 407
Y + + + P V G +V +A G H
Sbjct: 4227 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4264
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 97/212 (45%), Gaps = 28/212 (13%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ ++CGS + A++ G L WG YG+LG G + E P ++ G
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-SSEDEVIPVLVAGLKGL-------- 604
Query: 229 KITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
K+ V+CG + + AV+ENG+V++WG G G+LG D P+ + L + +
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR---GGSDGCKTPKLIEKLQDLDVV 661
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
V CG S ALT G +Y+WG +LG G ++ + R +L G
Sbjct: 662 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG------------TEEHVRYPKLLEGLQG 709
Query: 347 VQL--VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
++ VA G +H L D +H WG N Q
Sbjct: 710 KKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 98/219 (44%), Gaps = 46/219 (21%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ Q++C + LS G + YN P++++G A + +
Sbjct: 454 VTQIACAEKRFLILSRSGRVYTQAYNSDAL-----------APQLVQGLA-----SRNII 497
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI--- 283
KI S G +H A++ GEVY+WG G G+LGH GD L P+ + A G
Sbjct: 498 KIAAHSDG-HHYLALAATGEVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAG 551
Query: 284 -FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
+ +ACG +S A+T++G LY WG G+LG G IP+LV
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEV-------------IPVLV 598
Query: 343 V-PNGVQL--VAC--GHSHTLVYMRDGRIHGWGYNSYGQ 376
G+++ VAC G + TL +G++ WG YG+
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG + G G + +R P+Q+ + + IA G H DG
Sbjct: 4221 AVYTWGKGDYHRLGH-GSDDHVRRPRQVQ-------GLQGKKVIAIATGSLHCVCCTEDG 4272
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
++TWG N+ GQLGDGT + P V LQ + V ++CG+ T A
Sbjct: 4273 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4319
>gi|115439409|ref|NP_001043984.1| Os01g0700200 [Oryza sativa Japonica Group]
gi|56784719|dbj|BAD81868.1| zinc finger protein-like [Oryza sativa Japonica Group]
gi|56785284|dbj|BAD82210.1| zinc finger protein-like [Oryza sativa Japonica Group]
gi|113533515|dbj|BAF05898.1| Os01g0700200 [Oryza sativa Japonica Group]
gi|215704825|dbj|BAG94853.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1044
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 166/390 (42%), Gaps = 65/390 (16%)
Query: 14 VDNIPAKSAIYVWG------YNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLD- 66
D+I + +YVWG G T + + IPK L ++ LD
Sbjct: 209 TDDIESLGDVYVWGEVWTDVTPSDGHTSSSCSKVDVLIPKPLESDVV----------LDV 258
Query: 67 --IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
IACG H A G +FTWG G+LG GT+ P+ V+ L V ISCG
Sbjct: 259 NQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDLISCGEF 318
Query: 125 CTAAIAEPRE----NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVV 180
T A+ + DG+ + L G P+ G ++ V+CGS H
Sbjct: 319 HTCAVTTSGDLFNWGDGSYNVGLLGC-GTEVSYWLPKKVSGPLEGLQVL-SVACGSWHSA 376
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
+ G L +G +G LG G E L P+ ++ + F K +V+CG +HS
Sbjct: 377 LTTSSGKLYTFGDGTFGVLGHGDR-ETLAYPKEVEALSGF--------KTIKVACGIWHS 427
Query: 241 AAVSE----------NGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDV 288
AA+ E + ++YTWG G +LGH GDKE L+P+ V AL +
Sbjct: 428 AAIVEVTNQTGANVMSKKLYTWGDGDKNRLGH-----GDKEPRLVPKCVQALLEYNFHQL 482
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQT--RSFSLIPNESDTYFRNIPILVVPNG 346
ACG + AL + G ++ G S GQLG P++ + L+ + +
Sbjct: 483 ACGHNMTVALATSGRVFTMGSSSNGQLG-NPKSDGKQPCLVQDR-----------LASEL 530
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
V+ ++CG SH V ++ WG + G+
Sbjct: 531 VEEISCGASHVTVLTSRSEVYTWGMGANGR 560
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 116/257 (45%), Gaps = 33/257 (12%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
LP ++ G G + L +ACG H+A S G L+T+G FG LG G E +P++V
Sbjct: 352 LPKKVSGPLEGL--QVLSVACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEV 409
Query: 109 KQLQSEFVKSISCGAHCTAAIAEPRENDG-TISTSRLWVWGQ------NQGSNFPRLFWG 161
+ L ++CG +AAI E G + + +L+ WG G PRL
Sbjct: 410 EALSGFKTIKVACGIWHSAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRL--- 466
Query: 162 AFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVI 214
P + Q++CG VAL+ G + G + GQLG P+
Sbjct: 467 --VPKCVQALLEYNFHQLACGHNMTVALATSGRVFTMGSSSNGQLG---------NPKSD 515
Query: 215 KGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLP 274
+ + E + ++SCG H ++ EVYTWG+G+ G+LGH L+ K L
Sbjct: 516 GKQPCLVQDRLASELVEEISCGASHVTVLTSRSEVYTWGMGANGRLGHGDLKDRKKPCL- 574
Query: 275 RRVVALDGIFIKDVACG 291
V AL +K ++CG
Sbjct: 575 --VEALKDRHVKSISCG 589
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 60/126 (47%), Gaps = 14/126 (11%)
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
+I+CG H + S ++TWG G+LG G + RK P V+ L+ VKSISCG++
Sbjct: 533 EISCGASHVTVLTSRSEVYTWGMGANGRLGHGDLKDRKKPCLVEALKDRHVKSISCGSNF 592
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGS-NFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
T I + WV G +Q R +G FT C +CG VH A S
Sbjct: 593 TTCICIHK-----------WVSGADQSVCTGCRQAFG-FTRKRHDC-YNCGLVHCHACSS 639
Query: 185 CGLLQA 190
+L+A
Sbjct: 640 RKVLKA 645
>gi|426379401|ref|XP_004056386.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gorilla
gorilla gorilla]
Length = 4502
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 173/382 (45%), Gaps = 79/382 (20%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI--- 139
++ WGA GQL E GR + + CG +CT I + +GT+
Sbjct: 3640 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVI----QANGTVLAC 3692
Query: 140 ---STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQV--SCGSV-HVVALSECGLLQAWGY 193
S RL GQ + L + ++ Q+ SCGS H +AL+E G + +WG
Sbjct: 3693 GEGSYGRL---GQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 3749
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
+YG+LG G + + PR I EA + E++ Q+SCG HSA V+ +G+++T+G
Sbjct: 3750 GDYGKLGHG-NSDRQRRPRQI--------EALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 3800
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL-YAWGGSQA 312
G G+LG L + + LP RV AL+G I VACG H+ A+++ G++ +A+G
Sbjct: 3801 NGDYGRLG---LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 3857
Query: 313 GQLGLGPQTRSFSLIPNESDTY--------------------------FRNIPILVVPNG 346
G+LGLG T S P + D F ++ +P G
Sbjct: 3858 GKLGLGNSTAKSS--PQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 3915
Query: 347 ------------------VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYP 388
++ VA G HTL +G ++ WG NS GQ + + P
Sbjct: 3916 RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP 3975
Query: 389 SPVDWCVGE-VRKLAAGGGHSA 409
+ V G+ VR+++AG HSA
Sbjct: 3976 TVVTGLQGKNVRQISAGRCHSA 3997
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 185/405 (45%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ P+L P+ ++++ I G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQ------PKL--APSFSDAQ--TIEAGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG----T 138
+ G +G+LG G + +K+L E +SI ++ + +DG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQS---TLKKLTFEPHRSIK-------KVSSSKGSDGHTLAF 473
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ ++ WG + +P+L G ++C VS G H A++E G L
Sbjct: 474 TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGEL 532
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G P ++K ++ + +VSCG H+ A+S++G
Sbjct: 533 YTWGEGDFGRLGHG-DSNSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 581
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ + AL G+FI+ V G S ALTS G +Y
Sbjct: 582 TVWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVY 636
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V V+ G SH L D
Sbjct: 637 AWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-VSIGDSHCLALSHDNE 685
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 166/377 (44%), Gaps = 85/377 (22%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPP-------- 51
MD + T+RP D ++ K +Y+WG GQ GR + +P P
Sbjct: 3617 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMVPAAAPSFSQAQQVI 3674
Query: 52 -------------ELFGCPAGANSRW------------------------LDIACGHE-H 73
+ C G+ R L +CG + H
Sbjct: 3675 CGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGH 3734
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
+ A+ G +F+WG ++G+LG G + ++ P +++ LQ E V +SCG +A +
Sbjct: 3735 SMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT--- 3791
Query: 134 ENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-----------ICQVSCGSVHVVAL 182
+DG +L+ +G ++ RL G + + I QV+CG H +A+
Sbjct: 3792 -SDG-----KLFTFGNG---DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV 3842
Query: 183 SECG-LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
S G ++ A+G +YG+LG G P+ I I +V+CG S
Sbjct: 3843 SADGSMVWAFGDGDYGKLGLG-NSTAKSSPQKIDVLCGI--------GIKKVACGTQFSV 3893
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A++++G VYT+G + L ++ ++ P+++ L G+ I+DVA G H+ AL S
Sbjct: 3894 ALTKDGHVYTFGQDRLIGLPEGRARNHNR---PQQIPVLAGVIIEDVAVGAEHTLALASN 3950
Query: 302 GALYAWGGSQAGQLGLG 318
G +YAWG + GQLGLG
Sbjct: 3951 GDVYAWGSNSEGQLGLG 3967
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 143/307 (46%), Gaps = 43/307 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V SDG
Sbjct: 3744 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTSDGK 3795
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG++
Sbjct: 3796 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA----DGSM--- 3848
Query: 143 RLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T P I I +V+CG+ VAL++ G + +
Sbjct: 3849 -VWAFGDG---DYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTF 3904
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ I A + I V+ G H+ A++ NG+VY
Sbjct: 3905 GQDRLIGLPEG-RARNHNRPQQIPVLAGVI--------IEDVAVGAEHTLALASNGDVYA 3955
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWGGS 310
WG S GQLG L + P V L G ++ ++ G HS A T+ A G S
Sbjct: 3956 WGSNSEGQLG---LGHTNHVREPTVVTGLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVS 4012
Query: 311 QAGQLGL 317
QLGL
Sbjct: 4013 VPLQLGL 4019
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P I I +V GS +AL+ G + AW
Sbjct: 583 -VWSFG---GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I VS G+ H A+S + EVY
Sbjct: 639 GCG--ACLGCGSSEATALRPKLIEELAA--------TRIVDVSIGDSHCLALSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDGI I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VSE EVY WG S QL G +E + + +A + + G + +++ G
Sbjct: 368 VSETCEVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ A G G+LGLG +L + + R+I + G HTL +
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RSIKKVSSSKG------SDGHTLAFTT 475
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+G + WG YG+ + S+ YP + + G+V ++AG HSA + +
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
>gi|418719204|ref|ZP_13278404.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
borgpetersenii str. UI 09149]
gi|421094338|ref|ZP_15555056.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
borgpetersenii str. 200801926]
gi|410362760|gb|EKP13795.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
borgpetersenii str. 200801926]
gi|410744357|gb|EKQ93098.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
borgpetersenii str. UI 09149]
Length = 506
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 169/395 (42%), Gaps = 94/395 (23%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHC 125
++ G H+ + +G ++T G N FGQLG G G ++ + + +L S + SI +
Sbjct: 131 LSAGGAHSGFL-KNGEVYTVGRNNFGQLGTGNSTGDENNDVIVKLNSISNIFSIHFNQNN 189
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQ------GSNF-----PRLFWGAFTPNTIICQV-- 172
+ AIA+ R++ WG N G+N PR G P T++ +
Sbjct: 190 SMAIAK---------NGRVYTWGNNAKGQLGIGNNNTNPANPRA-AGNRQPPTLVPGIND 239
Query: 173 ----SCGSVHVVALSECGLLQAWGYNEYGQLGRG---ITCEGL-QGPRVIKGYAKFLDEA 224
+ G H + L G + A+G N GQLG G + + P + G
Sbjct: 240 AVMGAYGFNHALILKSDGTVVAFGQNNVGQLGNGANDLNADSFSMDPVAVVG-------- 291
Query: 225 PELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK-ELLPRRVVALDGI 283
L + QV G HSAA++ENGEVY WG G LG+ L + + + P +V L G
Sbjct: 292 --LSDVIQVIAGSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAIQSTPVKVEGLSG- 348
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQ----------------------- 320
IK +A G H AL S G +Y+WG + +GQLG+G
Sbjct: 349 -IKQIANGRDHILALASNGRIYSWGLNASGQLGIGGNGSPNPTPNPTQILNITNASSVWA 407
Query: 321 --TRSFSLIPN------------------ESDT---YFRNIPILVVPNGVQLVACGHSHT 357
T+SFS++ N E++T Y N ++ + N + CG +H
Sbjct: 408 GGTQSFSILKNGEVKGWGANGNTANLAIGETNTLKVYEPNKAVVGIDNVIHF-GCGATHN 466
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKSTYAW-YPSPV 391
+ DG I+GWG+N G + W P+PV
Sbjct: 467 FALLGDGEIYGWGWNFKGSLGRQDLQANWGAPNPV 501
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 130/322 (40%), Gaps = 49/322 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPK----QLPPELFGCPAGANSRWLDIACGHE 72
I +Y WG N GQ G P+ + PP L G N + A G
Sbjct: 193 IAKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLV---PGINDAVMG-AYGFN 248
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHP---EKVKQLQSEFVKSISCGAHCTAAI 129
H + SDGT+ +G N GQLG+G + + V + V + G+ +AA+
Sbjct: 249 HALILKSDGTVVAFGQNNVGQLGNGANDLNADSFSMDPVAVVGLSDVIQVIAGSEHSAAL 308
Query: 130 AEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAF-----TPNTI-----ICQVSCGSVHV 179
E E ++VWG+NQ N A TP + I Q++ G H+
Sbjct: 309 TENGE---------VYVWGRNQYGNLGNGRLSAANAIQSTPVKVEGLSGIKQIANGRDHI 359
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
+AL+ G + +WG N GQLG G G P + L+ + + V G
Sbjct: 360 LALASNGRIYSWGLNASGQLGIG----GNGSPNPTPNPTQILN----ITNASSVWAGGTQ 411
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLP-----RRVVALDGIFIKDVACGGVH 294
S ++ +NGEV WG +L G+ L + VV +D + CG H
Sbjct: 412 SFSILKNGEVKGWGANG----NTANLAIGETNTLKVYEPNKAVVGIDNVI--HFGCGATH 465
Query: 295 SCALTSKGALYAWGGSQAGQLG 316
+ AL G +Y WG + G LG
Sbjct: 466 NFALLGDGEIYGWGWNFKGSLG 487
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 109/274 (39%), Gaps = 56/274 (20%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + + +G N+ GQ G + P + G S + + G EH+AA
Sbjct: 253 LKSDGTVVAFGQNNVGQLGNGANDLNADSFSMDPVAVVGL-----SDVIQVIAGSEHSAA 307
Query: 77 VASDGTLFTWGANEFGQLGDGTEEG----RKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
+ +G ++ WG N++G LG+G + P KV+ L +K I+ G A+A
Sbjct: 308 LTENGEVYVWGRNQYGNLGNGRLSAANAIQSTPVKVEGLSG--IKQIANGRDHILALA-- 363
Query: 133 RENDGTISTSRLWVWGQN---------QGSNFPRLFWGAFTPN-TIICQVS------CGS 176
S R++ WG N GS P TPN T I ++ G
Sbjct: 364 -------SNGRIYSWGLNASGQLGIGGNGSPNP-------TPNPTQILNITNASSVWAGG 409
Query: 177 VHVVALSECGLLQAWGYNEYG---QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
++ + G ++ WG N +G T + + + + G ++ +
Sbjct: 410 TQSFSILKNGEVKGWGANGNTANLAIGETNTLKVYEPNKAVVG----------IDNVIHF 459
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQS 267
CG H+ A+ +GE+Y WG G LG LQ+
Sbjct: 460 GCGATHNFALLGDGEIYGWGWNFKGSLGRQDLQA 493
>gi|402901986|ref|XP_003913912.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Papio anubis]
Length = 551
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 113/227 (49%), Gaps = 22/227 (9%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H+V + G + WG+N Y QLG G T GL ++ + +++ +V+CG
Sbjct: 110 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSN--------KQVIEVACGS 161
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHSC 296
YHS ++ +GEV+ WG + GQ+G S + + +PRRV L + +ACG +
Sbjct: 162 YHSLVLTSDGEVFAWGYNNSGQVGSGSTVN---QPIPRRVTGCLQNKVVVTIACGQMCCM 218
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G +Y WG + GQLGLG + + R VQ VACG++H
Sbjct: 219 AVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR----------VQRVACGYAH 268
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 403
TLV +G+++ WG NSYGQ + YP+PV + ++AA
Sbjct: 269 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA 315
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 135/303 (44%), Gaps = 49/303 (16%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTAAIAEPRENDGTIS 140
+F G N G LG G + P ++ L + + S+S G+ H A E
Sbjct: 67 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTE--------- 117
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVS------------CGSVHVVALSECGLL 188
++ WG N + +L G + CQ+S CGS H + L+ G +
Sbjct: 118 -GEVFTWGHNA---YSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEV 173
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
AWGYN GQ+G G T PR + G + + + ++CG+ AV + GE
Sbjct: 174 FAWGYNNSGQVGSGSTVNQ-PIPRRVTG-------CLQNKVVVTIACGQMCCMAVVDTGE 225
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
VY WG GQLG L S + P RV AL GI ++ VACG H+ LT +G +YAWG
Sbjct: 226 VYVWGYNGNGQLG---LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRIH 367
+ GQLG G N+S+ + + +++ AC +HT + G ++
Sbjct: 283 ANSYGQLGTG----------NKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVY 332
Query: 368 GWG 370
WG
Sbjct: 333 MWG 335
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 114/243 (46%), Gaps = 39/243 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G +P Q+ L +N + +++ACG H+ + SDG
Sbjct: 120 VFTWGHNAYSQLG-NGTTNHGLVPCQISTNL------SNKQVIEVACGSYHSLVLTSDGE 172
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P +V LQ++ V +I+CG C A+ + T
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAV---------VDT 223
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N N P A + +V+CG H + L++ G + AWG
Sbjct: 224 GEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 283
Query: 194 NEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G + + P + E ++I ++ +C H SAA ++ G VY
Sbjct: 284 NSYGQLGTGNKSNQSYPTPVTV-----------EKDRIIEIAACHSTHTSAAKTQGGHVY 332
Query: 251 TWG 253
WG
Sbjct: 333 MWG 335
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 72/151 (47%), Gaps = 13/151 (8%)
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG-GVHSCALTSKGAL 304
N E++ G G LG +QS + PRR+ +L G I ++ G G H T++G +
Sbjct: 64 NDEIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEV 120
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 364
+ WG + QLG G T + L+P + T N ++ V ACG H+LV DG
Sbjct: 121 FTWGHNAYSQLGNG--TTNHGLVPCQISTNLSNKQVIEV-------ACGSYHSLVLTSDG 171
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 395
+ WGYN+ GQ + + P V C+
Sbjct: 172 EVFAWGYNNSGQVGSGSTVNQPIPRRVTGCL 202
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 18/150 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G Q P A R +ACG+ HT + +G
Sbjct: 226 VYVWGYNGNGQLGLGSSGNQ--------PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 277
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WGAN +GQLG G + + +P V + ++ +C + T+A
Sbjct: 278 VYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSA--------AKTQGG 329
Query: 143 RLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 330 HVYMWGQCRGQSVILPHLTHFSCTDDVFAC 359
>gi|332233498|ref|XP_003265939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
[Nomascus leucogenys]
Length = 984
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 120/238 (50%), Gaps = 19/238 (7%)
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
VSCG H +A+ G + AWG GQLG G E P+ I KI
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEISFTPKKITTLNGI--------KII 131
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
QVSCG YHS A+S++ +V++WG S GQLG + + P+RV +L+GI + VA G
Sbjct: 132 QVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAG 189
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN-GVQLV 350
G HS AL+ G + WG + AGQL L + +P +S+ + + + + N GV +
Sbjct: 190 GAHSFALSLCGTSFGWGSNSAGQLALSGRN-----VPVQSN---KPLSVGALKNLGVVYI 241
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
+CG HT V +DG++ +G N GQ + P V+ G V ++ G H+
Sbjct: 242 SCGAEHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVEIIDGLVSQVDCGSYHT 299
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 140/319 (43%), Gaps = 42/319 (13%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
L A G H+ + ++ + + G N GQLG + PE ++ L++ V +SCG
Sbjct: 26 LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDLVSCGKE 85
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSNFP--RLFWGAFTPNTI-------ICQVSCG 175
+ A+ R++ WG L +FTP I I QVSCG
Sbjct: 86 HSLAVCH---------KGRVFAWGAGSEGQLGIGELKEISFTPKKITTLNGIKIIQVSCG 136
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
H +ALS+ + +WG N +GQLG G P+ ++ L+ P + QV+
Sbjct: 137 HYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRS----LEGIP----LAQVAA 188
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
G HS A+S G + WG S GQL + P V AL + + ++CG H+
Sbjct: 189 GGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHT 248
Query: 296 CALTSKGALYAWGGSQAGQLGLG--PQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG 353
LT G ++ +G +++GQLG P+ R L+ ++ V V CG
Sbjct: 249 AVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVE-------------IIDGLVSQVDCG 295
Query: 354 HSHTLVYMR-DGRIHGWGY 371
HTL Y+ G++ +G+
Sbjct: 296 SYHTLAYVHTTGQVVSFGH 314
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 136/310 (43%), Gaps = 58/310 (18%)
Query: 27 GYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTW 86
G N GQ GR+G P+ PE N ++CG EH+ AV G +F W
Sbjct: 48 GDNSRGQLGRRG------APRGELPEPIQALETLNVDL--VSCGKEHSLAVCHKGRVFAW 99
Query: 87 GANEFGQLGDG-TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLW 145
GA GQLG G +E P+K+ L + +SCG + + A+++ S+++
Sbjct: 100 GAGSEGQLGIGELKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK---------DSQVF 150
Query: 146 VWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWG 192
WG+N G FP +P + + QV+ G H ALS CG WG
Sbjct: 151 SWGKNSHGQLGLGKEFP----SQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWG 206
Query: 193 YNEYGQL---GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
N GQL GR + + + V G K L + +SCG H+A ++++G+V
Sbjct: 207 SNSAGQLALSGRNVPVQSNKPLSV--GALKNLG-------VVYISCGAEHTAVLTQDGKV 257
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
+T+G GQLG+ ++ P+ V +DG+ + V CG H+ A Y
Sbjct: 258 FTFGDNRSGQLGY---SPTPEKRGPQLVEIIDGL-VSQVDCGSYHTLA-------YVHTT 306
Query: 310 SQAGQLGLGP 319
Q G GP
Sbjct: 307 GQVVSFGHGP 316
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 121/242 (50%), Gaps = 25/242 (10%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG GQ G G +++ + L G + + ++CGH H+ A++
Sbjct: 93 KGRVFAWGAGSEGQLG-IGELKEISFTPKKITTLNGI------KIIQVSCGHYHSLALSK 145
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISC-GAHCTA-AIAEPREND 136
D +F+WG N GQLG G E + P++V+ L+ + ++ GAH A ++
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW 205
Query: 137 GTISTSRLWVWGQN--QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
G+ S +L + G+N SN P L GA N + +SCG+ H L++ G + +G N
Sbjct: 206 GSNSAGQLALSGRNVPVQSNKP-LSVGALK-NLGVVYISCGAEHTAVLTQDGKVFTFGDN 263
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEVYTWG 253
GQLG T E +GP+++ + +D ++QV CG YH+ A V G+V ++G
Sbjct: 264 RSGQLGYSPTPEK-RGPQLV----EIIDGL-----VSQVDCGSYHTLAYVHTTGQVVSFG 313
Query: 254 LG 255
G
Sbjct: 314 HG 315
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 60/146 (41%), Gaps = 14/146 (9%)
Query: 270 KELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPN 329
+EL RR G + A G HS L + + + G + GQLG R +P
Sbjct: 10 RELQRRRTEGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPR--GELPE 67
Query: 330 ESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ-AANEKSTYAWY 387
PI + V LV+CG H+L GR+ WG S GQ E ++
Sbjct: 68 ---------PIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEISFT 118
Query: 388 PSPVDWCVG-EVRKLAAGGGHSAVLA 412
P + G ++ +++ G HS L+
Sbjct: 119 PKKITTLNGIKIIQVSCGHYHSLALS 144
>gi|302784100|ref|XP_002973822.1| hypothetical protein SELMODRAFT_100519 [Selaginella moellendorffii]
gi|300158154|gb|EFJ24777.1| hypothetical protein SELMODRAFT_100519 [Selaginella moellendorffii]
Length = 413
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 164/371 (44%), Gaps = 60/371 (16%)
Query: 20 KSAIYVWGYNHSGQTGRK-GRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
K ++ G N SGQ G RE P E+ G P + IA G H+AA+
Sbjct: 79 KGRVFATGLNSSGQLGVPLKRESSFD-----PVEVHGFP----DPCVHIAAGRYHSAAIT 129
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKH--PEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
S G + WG N GQLG G + P+K++ L +K+++ G + +AE +
Sbjct: 130 SSGETYVWGRNSEGQLGLGKRAKSVYITPQKMESLAGMRLKALALGTDHSLGLAETGQVL 189
Query: 137 GTISTSRLWVWGQNQGSNFPRLF--WGAFTPNTIIC-------QVSCGSVHVVALSECGL 187
+ T+R G + + F F +TP I C VS G VH + G
Sbjct: 190 -SWGTNRFGCLGHGEMTGFFDFFKDTNEYTPRIIHCLEKLQIRSVSAGLVHSACADDSGT 248
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ ++G QLG G + Q P I P+L +++ +SCG YH+ A++++G
Sbjct: 249 IYSFGQGSMCQLGLGNNNDASQ-PCPI----------PDLPRVSSISCGGYHTGAITQDG 297
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
++YTWG G LG ++ K P R+ +L F+ +++CG H+ A+ S G +++W
Sbjct: 298 DIYTWGSNEHGCLG-SGFRASSK---PLRLESLAEAFMSEISCGWKHTAAI-SDGYIFSW 352
Query: 308 G------------GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHS 355
G S GQLG+G F +P E D + V+CG +
Sbjct: 353 GWGGSYGTYATQAESSGGQLGVGTDFDFFEPVPIEMDDRLSALH----------VSCGFN 402
Query: 356 HTLVYMRDGRI 366
HT + + I
Sbjct: 403 HTAAILEEIEI 413
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 159/374 (42%), Gaps = 49/374 (13%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K + +WG +G GR G Q P L C A + ++CG HT +
Sbjct: 27 KRWVALWG---NGDQGRLGLSES---GSQFEPVL--CRALESHEPCSVSCGGAHTLILTD 78
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
G +F G N GQLG + E P +V V I+ G + +AAI
Sbjct: 79 KGRVFATGLNSSGQLGVPLKRESSFDPVEVHGFPDPCVH-IAAGRYHSAAIT-------- 129
Query: 139 ISTSRLWVWGQNQGSNF---PRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
S+ +VWG+N R TP + + ++ G+ H + L+E G +
Sbjct: 130 -SSGETYVWGRNSEGQLGLGKRAKSVYITPQKMESLAGMRLKALALGTDHSLGLAETGQV 188
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG N +G LG G + Y + E +I VS G HSA ++G
Sbjct: 189 LSWGTNRFGCLGHGEMTGFFDFFKDTNEYTPRIIHCLEKLQIRSVSAGLVHSACADDSGT 248
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
+Y++G GS+ QLG L + + P + L + ++CGG H+ A+T G +Y WG
Sbjct: 249 IYSFGQGSMCQLG---LGNNNDASQPCPIPDLP--RVSSISCGGYHTGAITQDGDIYTWG 303
Query: 309 GSQAGQLGLGPQTRSFSL-IPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
++ G LG G + S L + + ++ + I +CG HT + DG I
Sbjct: 304 SNEHGCLGSGFRASSKPLRLESLAEAFMSEI------------SCGWKHTAA-ISDGYIF 350
Query: 368 GWGY-NSYGQAANE 380
WG+ SYG A +
Sbjct: 351 SWGWGGSYGTYATQ 364
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 113/242 (46%), Gaps = 12/242 (4%)
Query: 170 CQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK 229
C VSCG H + L++ G + A G N GQLG + E P + G+ +
Sbjct: 64 CSVSCGGAHTLILTDKGRVFATGLNSSGQLGVPLKRESSFDPVEVHGFP---------DP 114
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
++ G YHSAA++ +GE Y WG S GQLG ++ + P+++ +L G+ +K +A
Sbjct: 115 CVHIAAGRYHSAAITSSGETYVWGRNSEGQLG-LGKRAKSVYITPQKMESLAGMRLKALA 173
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
G HS L G + +WG ++ G LG G T F + ++ R I L ++
Sbjct: 174 LGTDHSLGLAETGQVLSWGTNRFGCLGHGEMTGFFDFFKDTNEYTPRIIHCLEKLQ-IRS 232
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
V+ G H+ G I+ +G S Q + A P P+ + V ++ GG H+
Sbjct: 233 VSAGLVHSACADDSGTIYSFGQGSMCQLGLGNNNDASQPCPIP-DLPRVSSISCGGYHTG 291
Query: 410 VL 411
+
Sbjct: 292 AI 293
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 130/316 (41%), Gaps = 70/316 (22%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I + YVWG N GQ G R + + I Q L A R +A G +H+
Sbjct: 128 ITSSGETYVWGRNSEGQLGLGKRAKSVYITPQKMESL------AGMRLKALALGTDHSLG 181
Query: 77 VASDGTLFTWGANEFGQLGDGTEEG---------RKHPEKVKQLQSEFVKSISCG-AHCT 126
+A G + +WG N FG LG G G P + L+ ++S+S G H
Sbjct: 182 LAETGQVLSWGTNRFGCLGHGEMTGFFDFFKDTNEYTPRIIHCLEKLQIRSVSAGLVHSA 241
Query: 127 AAIAEPRENDGTI------STSRLWVWGQNQGS------NFPRLFWGAFTPNTIICQVSC 174
A ++ GTI S +L + N S + PR + +SC
Sbjct: 242 CA-----DDSGTIYSFGQGSMCQLGLGNNNDASQPCPIPDLPR-----------VSSISC 285
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G H A+++ G + WG NE+G LG G P ++ A+ ++++S
Sbjct: 286 GGYHTGAITQDGDIYTWGSNEHGCLGSGFRAS--SKPLRLESLAEAF--------MSEIS 335
Query: 235 CGEYHSAAVSENGEVYTWGLG------------SVGQLGHCSLQSGDKELLPRRVVALDG 282
CG H+AA+S+ G +++WG G S GQLG + + P + D
Sbjct: 336 CGWKHTAAISD-GYIFSWGWGGSYGTYATQAESSGGQLG---VGTDFDFFEPVPIEMDDR 391
Query: 283 IFIKDVACGGVHSCAL 298
+ V+CG H+ A+
Sbjct: 392 LSALHVSCGFNHTAAI 407
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 117/265 (44%), Gaps = 35/265 (13%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG + G+LG ++ G Q + L A E + VSCG H+ +++ G V+
Sbjct: 33 WGNGDQGRLG--LSESGSQ-------FEPVLCRALESHEPCSVSCGGAHTLILTDKGRVF 83
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
GL S GQLG L+ + P V + +A G HS A+TS G Y WG +
Sbjct: 84 ATGLNSSGQLG-VPLKR-ESSFDPVEVHGFPDPCVH-IAAGRYHSAAITSSGETYVWGRN 140
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWG 370
GQLGLG + +S + P + ++ + ++ +A G H+L G++ WG
Sbjct: 141 SEGQLGLGKRAKSVYITPQKMES--------LAGMRLKALALGTDHSLGLAETGQVLSWG 192
Query: 371 YNSYGQAANEKSTYAW--------YPSPVDWCVG--EVRKLAAGGGHSAVLADACSLK-- 418
N +G + + T + Y + C+ ++R ++AG HSA D+ ++
Sbjct: 193 TNRFGCLGHGEMTGFFDFFKDTNEYTPRIIHCLEKLQIRSVSAGLVHSACADDSGTIYSF 252
Query: 419 ---ELCEFRLAESVTLSNASEIEDV 440
+C+ L + S I D+
Sbjct: 253 GQGSMCQLGLGNNNDASQPCPIPDL 277
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 76/168 (45%), Gaps = 16/168 (9%)
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
V WG G G+LG L + P AL+ V+CGG H+ LT KG ++A G
Sbjct: 30 VALWGNGDQGRLG---LSESGSQFEPVLCRALESHEPCSVSCGGAHTLILTDKGRVFATG 86
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHG 368
+ +GQLG +P + ++ F + + P+ +A G H+ G +
Sbjct: 87 LNSSGQLG----------VPLKRESSFDPVEVHGFPDPCVHIAAGRYHSAAITSSGETYV 136
Query: 369 WGYNSYGQAANEKSTYAWYPSP--VDWCVG-EVRKLAAGGGHSAVLAD 413
WG NS GQ K + Y +P ++ G ++ LA G HS LA+
Sbjct: 137 WGRNSEGQLGLGKRAKSVYITPQKMESLAGMRLKALALGTDHSLGLAE 184
>gi|302753472|ref|XP_002960160.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
gi|300171099|gb|EFJ37699.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
Length = 435
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 159/360 (44%), Gaps = 65/360 (18%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A+ ++VWG G+ G Q + + P + R + G H A+
Sbjct: 102 AEQDVFVWGKGDGGRLGIDTEFNQYK--PYVNPRI--------KRVQMASAGGLHNIALT 151
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
G ++TWG FG LG G+ E P ++ + + +S G TAA+ E E
Sbjct: 152 EVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHTAAVTESGE---- 207
Query: 139 ISTSRLWVWGQNQGS------NFPRLFWGAFT-PNTI------ICQVSCGSVHVVALSEC 185
L+ WG+++G N + GA + P + I V CG +AL++
Sbjct: 208 -----LYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDVPIALVYCGGFFTMALTKS 262
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G L +WG N +LG G + P+V+ A E + QV+CG +H+AA+++
Sbjct: 263 GQLWSWGGNANHELGHGTRANNWK-PKVVA--------ALEDVTLVQVACGGFHAAALTQ 313
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V TWG G GQLGH +L++G + P V A+ +ACG + A+T G LY
Sbjct: 314 DGKVITWGYGGNGQLGHGTLENGKE---PAIVEAMADKTCTYIACGPAWTAAITENGDLY 370
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV---------VPNGVQLVACGHSH 356
WG ++ QLG IP D P+LV P V V+CG +H
Sbjct: 371 TWGKNRDYQLG----------IPGLKDEQLD--PVLVQFPQALHEKTPVEVLGVSCGANH 418
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 153/316 (48%), Gaps = 47/316 (14%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAI-AEPRENDGTIS- 140
++ WG GQ+G G+E+ K P + L+ + + + A + A+PR + ++
Sbjct: 37 VWAWGRGTHGQVGHGSEDTEKLPVLISTLK---LAAFTGMAPIQGRMPAKPRLGNVGVTC 93
Query: 141 ---------TSRLWVWGQNQGSNF-PRLFWGAFTP--NTIICQV---SCGSVHVVALSEC 185
++VWG+ G + + P N I +V S G +H +AL+E
Sbjct: 94 GLFHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKPYVNPRIKRVQMASAGGLHNIALTEV 153
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + WGY +G LG G + E PR+++G P ++I VS G H+AAV+E
Sbjct: 154 GNVYTWGYGAFGALGHG-SYERELLPRLLEG--------PWKDRIVHVSAGGSHTAAVTE 204
Query: 246 NGEVYTWGLGS-VGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKG 302
+GE+YTWG G+LGH + D+ L P +V ALD + I V CGG + ALT G
Sbjct: 205 SGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALD-VPIALVYCGGFFTMALTKSG 263
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLVY 360
L++WGG+ +LG G TR+ + P ++ V LV ACG H
Sbjct: 264 QLWSWGGNANHELGHG--TRANNWKPK----------VVAALEDVTLVQVACGGFHAAAL 311
Query: 361 MRDGRIHGWGYNSYGQ 376
+DG++ WGY GQ
Sbjct: 312 TQDGKVITWGYGGNGQ 327
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 162/386 (41%), Gaps = 73/386 (18%)
Query: 18 PAKSAIYVWGYNHSGQTGRKGRERQLRIP-----------KQLPPELFGCPAGANSRWLD 66
PA+ ++ WG GQ G G E ++P + P PA +
Sbjct: 32 PAELEVWAWGRGTHGQVGH-GSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGNVG 90
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ CG H+ A +F WG + G+LG TE + P +++ V+ S G
Sbjct: 91 VTCGLFHSVLFAEQ-DVFVWGKGDGGRLGIDTEFNQYKPYVNPRIKR--VQMASAGGLHN 147
Query: 127 AAIAEPRENDGTISTSRLWVWGQN------QGSN----FPRLFWGAFTPNTIICQVSCGS 176
A+ E ++ WG GS PRL G + I VS G
Sbjct: 148 IALTE---------VGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDR--IVHVSAGG 196
Query: 177 VHVVALSECGLLQAWGYNE-YGQLGRG---ITCEG-LQGPRVIKGYAKFLDEAPELEKIT 231
H A++E G L WG +E G+LG G I EG L P ++ + P I
Sbjct: 197 SHTAAVTESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQAL-----DVP----IA 247
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
V CG + + A++++G++++WG + +LGH + + K P+ V AL+ + + VACG
Sbjct: 248 LVYCGGFFTMALTKSGQLWSWGGNANHELGHGTRANNWK---PKVVAALEDVTLVQVACG 304
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGL-----GPQTRSFSLIPNESDTYFRNIPILVVPNG 346
G H+ ALT G + WG GQLG G + + +++ TY
Sbjct: 305 GFHAAALTQDGKVITWGYGGNGQLGHGTLENGKEPAIVEAMADKTCTY------------ 352
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYN 372
+ACG + T +G ++ WG N
Sbjct: 353 ---IACGPAWTAAITENGDLYTWGKN 375
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 116/244 (47%), Gaps = 27/244 (11%)
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
V+CG H V +E + WG + G+LG I E Q Y +++ P ++++
Sbjct: 91 VTCGLFHSVLFAEQDVF-VWGKGDGGRLG--IDTEFNQ-------YKPYVN--PRIKRVQ 138
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
S G H+ A++E G VYTWG G+ G LGH S + +ELLPR + I V+ G
Sbjct: 139 MASAGGLHNIALTEVGNVYTWGYGAFGALGHGSYE---RELLPRLLEGPWKDRIVHVSAG 195
Query: 292 GVHSCALTSKGALYAWGGSQA-GQLGLG-PQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
G H+ A+T G LY WG + G+LG G P + + ++PI L
Sbjct: 196 GSHTAAVTESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDVPI-------AL 248
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVR--KLAAGGGH 407
V CG T+ + G++ WG N+ + + W P V + +V ++A GG H
Sbjct: 249 VYCGGFFTMALTKSGQLWSWGGNANHELGHGTRANNWKPKVVA-ALEDVTLVQVACGGFH 307
Query: 408 SAVL 411
+A L
Sbjct: 308 AAAL 311
>gi|403364753|gb|EJY82151.1| RCC1 domain containing protein [Oxytricha trifallax]
Length = 1344
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 158/367 (43%), Gaps = 70/367 (19%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV---KQLQSEFVKSISCGA 123
+ACG H A+ D LF+WG+ ++G LG GT + P + K+ + F++ I+CG
Sbjct: 294 VACGSAHILAITEDSELFSWGSGQYGALGFGTRDDIFEPRHLIIEKKDYTYFIEGIACGK 353
Query: 124 HCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVS 173
+ + + + ++ WGQ QG P+ + I +S
Sbjct: 354 YHSMCLTRKK---------KILTWGQGQGGRLGHGDEDDVLVPKEIYDLSKKKPIF--IS 402
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGI-TCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
G H A+SE L WG YG+LG G+ T E + P++I+ ++ +I
Sbjct: 403 AGESHSAAISEKLNLYTWGTGTYGRLGHGMDTSE--KKPKLIEDLDQY--------EIIH 452
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV------VALDGIFIK 286
VSCG +H+ A++ G VY +G G G+LG Q P ++ V + ++
Sbjct: 453 VSCGAFHTLAITGQGTVYAFGQGKYGKLGINRKQREGVFSRPEKISFYKVGVEPQEMLVQ 512
Query: 287 D------VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFS--------LIPNESD 332
D A G HS L G +Y+WG + G LG + + F IP E
Sbjct: 513 DKNEAILAAAGYNHSLCLAKSGKIYSWGYNGKGLLG---RQKGFEEHLPIEIGQIPGELI 569
Query: 333 TYFRNIPILV----------VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEK- 381
NI L+ V VACG +T+ G ++ +G N+YGQ A +K
Sbjct: 570 GKIPNIDELIQRGDLKQEETFSYEVIQVACGVLNTVSLTNGGEVYVFGSNAYGQLAKDKD 629
Query: 382 -STYAWY 387
+T+ Y
Sbjct: 630 QTTFRKY 636
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 141/302 (46%), Gaps = 43/302 (14%)
Query: 116 VKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGA----FTPNTIICQ 171
+ ++CG+ AI E E L+ WG Q + L +G F P +I +
Sbjct: 291 ITQVACGSAHILAITEDSE---------LFSWGSGQ---YGALGFGTRDDIFEPRHLIIE 338
Query: 172 ----------VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFL 221
++CG H + L+ + WG + G+LG G + L P+ I +K
Sbjct: 339 KKDYTYFIEGIACGKYHSMCLTRKKKILTWGQGQGGRLGHGDEDDVL-VPKEIYDLSK-- 395
Query: 222 DEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD 281
+K +S GE HSAA+SE +YTWG G+ G+LGH + + +K+ P+ + LD
Sbjct: 396 ------KKPIFISAGESHSAAISEKLNLYTWGTGTYGRLGH-GMDTSEKK--PKLIEDLD 446
Query: 282 GIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFR----- 336
I V+CG H+ A+T +G +YA+G + G+LG+ + R E ++++
Sbjct: 447 QYEIIHVSCGAFHTLAITGQGTVYAFGQGKYGKLGINRKQREGVFSRPEKISFYKVGVEP 506
Query: 337 NIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG 396
++ N L A G++H+L + G+I+ WGYN G +K P + G
Sbjct: 507 QEMLVQDKNEAILAAAGYNHSLCLAKSGKIYSWGYNGKGLLGRQKGFEEHLPIEIGQIPG 566
Query: 397 EV 398
E+
Sbjct: 567 EL 568
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 157/384 (40%), Gaps = 80/384 (20%)
Query: 19 AKS-AIYVWGYNHSGQTGR-KGRERQLRIPK-QLPPELFGCPAGANS------------- 62
AKS IY WGYN G GR KG E L I Q+P EL G +
Sbjct: 531 AKSGKIYSWGYNGKGLLGRQKGFEEHLPIEIGQIPGELIGKIPNIDELIQRGDLKQEETF 590
Query: 63 --RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
+ +ACG +T ++ + G ++ +G+N +GQL + Q+ F K
Sbjct: 591 SYEVIQVACGVLNTVSLTNGGEVYVFGSNAYGQLAKDKD------------QTTFRKYKK 638
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVV 180
+ ++ ++ +S + FP G T I ++CG H+
Sbjct: 639 QDQNNNNDNSQALDSSEQMSLIK-----------FP----GETTVR--INYIACGGEHIF 681
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
A+S L WG N+ GQLG G + P +I+ A + I ++CG+ +S
Sbjct: 682 AISRMNELFGWGRNDEGQLGLGFVSDFTAEPTLIRQIAH--------KNIQMIACGDNYS 733
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL-- 298
AAVS GE++ G G+LG Q+ K L + + IK VACG H A+
Sbjct: 734 AAVSAFGELFVTGNLENGKLGLG--QALKKGFLLSFTLIQNLAPIKSVACGPNHMLAIAD 791
Query: 299 ------TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIP--ILVVPNGVQLV 350
G Y+WG + GQLG+G + S N+P I + V
Sbjct: 792 YNPDHPIKDGMCYSWGRNWKGQLGIGSKEDS-------------NVPKKIHNAKERFKKV 838
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSY 374
ACG ++ +++ WG N Y
Sbjct: 839 ACGQDFSIGLTYGNQVYLWGNNKY 862
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 113/467 (24%), Positives = 182/467 (38%), Gaps = 104/467 (22%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLD-IACGHEHTA 75
I S ++ WG G G R+ P+ L E + +++ IACG H+
Sbjct: 304 ITEDSELFSWGSGQYGALGFGTRDDIFE-PRHLIIE-----KKDYTYFIEGIACGKYHSM 357
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
+ + TWG + G+LG G E+ P+++ L + IS G +AAI+E
Sbjct: 358 CLTRKKKILTWGQGQGGRLGHGDEDDVLVPKEIYDLSKKKPIFISAGESHSAAISEKL-- 415
Query: 136 DGTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGSVHVVALSE 184
L+ WG + RL G T P I I VSCG+ H +A++
Sbjct: 416 -------NLYTWG---TGTYGRLGHGMDTSEKKPKLIEDLDQYEIIHVSCGAFHTLAITG 465
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQG----PRVIKGYAKFLDEAPEL----EKITQVSCG 236
G + A+G +YG+L GI + +G P I Y ++ L + + G
Sbjct: 466 QGTVYAFGQGKYGKL--GINRKQREGVFSRPEKISFYKVGVEPQEMLVQDKNEAILAAAG 523
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFI----------- 285
HS ++++G++Y+WG G LG Q G +E LP + + G I
Sbjct: 524 YNHSLCLAKSGKIYSWGYNGKGLLGR---QKGFEEHLPIEIGQIPGELIGKIPNIDELIQ 580
Query: 286 --------------KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSF------- 324
VACG +++ +LT+ G +Y +G + GQL +F
Sbjct: 581 RGDLKQEETFSYEVIQVACGVLNTVSLTNGGEVYVFGSNAYGQLAKDKDQTTFRKYKKQD 640
Query: 325 -----------------SLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
SLI +T R + +ACG H R +
Sbjct: 641 QNNNNDNSQALDSSEQMSLIKFPGETTVR----------INYIACGGEHIFAISRMNELF 690
Query: 368 GWGYNSYGQ-AANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GWG N GQ S + P+ + + ++ +A G +SA ++
Sbjct: 691 GWGRNDEGQLGLGFVSDFTAEPTLIRQIAHKNIQMIACGDNYSAAVS 737
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 162/400 (40%), Gaps = 54/400 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLR----------------IPKQLPPELFGCPAGANSRWLD 66
+YV+G N GQ + + R + L P R
Sbjct: 613 VYVFGSNAYGQLAKDKDQTTFRKYKKQDQNNNNDNSQALDSSEQMSLIKFPGETTVRINY 672
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDG-TEEGRKHPEKVKQLQSEFVKSISCGAHC 125
IACG EH A++ LF WG N+ GQLG G + P ++Q+ + ++ I+CG +
Sbjct: 673 IACGGEHIFAISRMNELFGWGRNDEGQLGLGFVSDFTAEPTLIRQIAHKNIQMIACGDNY 732
Query: 126 TAAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFT--PNTI-ICQVSCGSVHVV 180
+AA++ E G + +L + G + F +FT N I V+CG H++
Sbjct: 733 SAAVSAFGELFVTGNLENGKLGL-----GQALKKGFLLSFTLIQNLAPIKSVACGPNHML 787
Query: 181 ALSEC--------GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
A+++ G+ +WG N GQLG G + E P+ I AK E+ +
Sbjct: 788 AIADYNPDHPIKDGMCYSWGRNWKGQLGIG-SKEDSNVPKKIHN-AK--------ERFKK 837
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
V+CG+ S ++ +VY WG C + +P+ + AL+ IKD+AC
Sbjct: 838 VACGQDFSIGLTYGNQVYLWGNNKY----FCDSKITKDVDIPQLLQALEQAQIKDIACSY 893
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVAC 352
L KG + WG ++ + S ++ P+ ++ ++
Sbjct: 894 KFCSVLNDKGEILIWGSYLTDRIKQNQKKDKKS----QNHLAITKFPMRKFDFLMETISA 949
Query: 353 GHSHTLVYMRDGRIHGWGYNSYGQ-AANEKSTYAWYPSPV 391
G +H+ ++ WG+ G+ NEK P+
Sbjct: 950 GQNHSAAVSVKRSLYTWGHAEGGRLGLNEKEYKNAKIEPI 989
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 106/475 (22%), Positives = 185/475 (38%), Gaps = 97/475 (20%)
Query: 17 IPAKSAIYVWGYNHSGQTG--RKGRERQLRIPKQL--------PPELFGCPAGANSRWLD 66
I + +Y +G G+ G RK RE P+++ P E+ + +
Sbjct: 463 ITGQGTVYAFGQGKYGKLGINRKQREGVFSRPEKISFYKVGVEPQEML---VQDKNEAIL 519
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
A G+ H+ +A G +++WG N G LG P ++ Q+ E + I
Sbjct: 520 AAAGYNHSLCLAKSGKIYSWGYNGKGLLGRQKGFEEHLPIEIGQIPGELIGKI------- 572
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
I E + G + + + + QV+CG ++ V+L+ G
Sbjct: 573 PNIDELIQR-GDLKQEETFSYE--------------------VIQVACGVLNTVSLTNGG 611
Query: 187 LLQAWGYNEYGQLGRGITCEGLQG-----PRVIKGYAKFLDEAPELE----------KIT 231
+ +G N YGQL + + ++ LD + ++ +I
Sbjct: 612 EVYVFGSNAYGQLAKDKDQTTFRKYKKQDQNNNNDNSQALDSSEQMSLIKFPGETTVRIN 671
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
++CG H A+S E++ WG GQLG + E R +A I + +ACG
Sbjct: 672 YIACGGEHIFAISRMNELFGWGRNDEGQLGLGFVSDFTAEPTLIRQIAHKNIQM--IACG 729
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTR-----SFSLIPNESDTYFRNIPILVVPNG 346
+S A+++ G L+ G + G+LGLG + SF+LI N + P
Sbjct: 730 DNYSAAVSAFGELFVTGNLENGKLGLGQALKKGFLLSFTLIQN------------LAP-- 775
Query: 347 VQLVACGHSHTLVY--------MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEV 398
++ VACG +H L ++DG + WG N GQ + P +
Sbjct: 776 IKSVACGPNHMLAIADYNPDHPIKDGMCYSWGRNWKGQLGIGSKEDSNVPKKIHNAKERF 835
Query: 399 RKLAAGGGHSAVLADACSL------KELCEFRLAESVTLSN------ASEIEDVA 441
+K+A G S L + K C+ ++ + V + ++I+D+A
Sbjct: 836 KKVACGQDFSIGLTYGNQVYLWGNNKYFCDSKITKDVDIPQLLQALEQAQIKDIA 890
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQL----GDGTEEGRKHPEKVKQLQSEF-VKSISC 121
I+ G H+A + G L+ WG N+ QL D T R K+K E+ KS+ C
Sbjct: 7 ISAGFSHSAIINQKGNLYVWGDNKNQQLTSYFSDQTILERPGHVKLKYKTQEYKAKSVVC 66
Query: 122 GAHCTAAIAEPREN 135
G T IA+ ++N
Sbjct: 67 GPTYTFVIAQNKQN 80
>gi|296213415|ref|XP_002753260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
[Callithrix jacchus]
gi|390468428|ref|XP_003733941.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 2
[Callithrix jacchus]
Length = 4860
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 173/382 (45%), Gaps = 79/382 (20%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI--- 139
++ WGA GQL E GR + + CG +CT I + +GT+
Sbjct: 3998 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVI----QANGTVLAC 4050
Query: 140 ---STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQV--SCGSV-HVVALSECGLLQAWGY 193
S RL GQ + L + ++ Q+ SCGS H +AL+E G + +WG
Sbjct: 4051 GEGSYGRL---GQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4107
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
+YG+LG G + + PR I EA + E++ Q+SCG HSA V+ +G+++T+G
Sbjct: 4108 GDYGKLGHG-NSDRQRRPRQI--------EALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4158
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL-YAWGGSQA 312
G G+LG L + + LP RV AL+G I VACG H+ A+++ G++ +A+G
Sbjct: 4159 NGDYGRLG---LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4215
Query: 313 GQLGLGPQTRSFSLIPNESDTY--------------------------FRNIPILVVPNG 346
G+LGLG T S P + D F ++ +P G
Sbjct: 4216 GKLGLGNSTAKSS--PQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4273
Query: 347 ------------------VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYP 388
++ VA G HTL +G ++ WG NS GQ + + P
Sbjct: 4274 RARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP 4333
Query: 389 SPVDWCVGE-VRKLAAGGGHSA 409
+ V G+ VR+++AG HSA
Sbjct: 4334 TLVTGLQGKNVRQISAGRCHSA 4355
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 181/405 (44%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ PK P + S I G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQ-PKLAP---------SFSDAQTIEAGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG----T 138
+ G +G+LG G + +K+L E +SI ++ + +DG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQS---TLKKLTFEPHRSIK-------KVSSSKGSDGHTLAF 473
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ ++ WG + +P+L G ++C VS G H A++E G L
Sbjct: 474 TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGEL 532
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G P ++K ++ + +VSCG H+ A+S++G
Sbjct: 533 YTWGEGDFGRLGHG-DSNSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 581
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ + AL G+FI+ V G S ALTS G +Y
Sbjct: 582 TVWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVY 636
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V V+ G SH L D
Sbjct: 637 AWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-VSIGDSHCLALSHDNE 685
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 168/379 (44%), Gaps = 89/379 (23%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPP-------- 51
MD + T+RP D ++ K +Y+WG GQ GR + +P P
Sbjct: 3975 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMVPAAAPSFSQAQQVI 4032
Query: 52 -------------ELFGCPAGANSRW------------------------LDIACGHE-H 73
+ C G+ R L +CG + H
Sbjct: 4033 CGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGH 4092
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
+ A+ G +F+WG ++G+LG G + ++ P +++ LQ E V +SCG +A +
Sbjct: 4093 SMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT--- 4149
Query: 134 ENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-----------ICQVSCGSVHVVAL 182
+DG +L+ +G ++ RL G + + I QV+CG H +A+
Sbjct: 4150 -SDG-----KLFTFGNG---DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV 4200
Query: 183 SECG-LLQAWGYNEYGQLGRGITC--EGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
S G ++ A+G +YG+LG G + Q V+ G I +V+CG
Sbjct: 4201 SADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG-----------IKKVACGTQF 4249
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT 299
S A++++G VYT+G + L ++ ++ P++V L G+ I+DVA G H+ AL
Sbjct: 4250 SVALTKDGHVYTFGQDRLIGLPEGRARNHNR---PQQVPVLAGVVIEDVAVGAEHTLALA 4306
Query: 300 SKGALYAWGGSQAGQLGLG 318
S G +YAWG + GQLGLG
Sbjct: 4307 SNGDVYAWGSNSEGQLGLG 4325
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 144/309 (46%), Gaps = 47/309 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V SDG
Sbjct: 4102 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTSDGK 4153
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG++
Sbjct: 4154 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA----DGSM--- 4206
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNT------IIC-----QVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T + ++C +V+CG+ VAL++ G + +
Sbjct: 4207 -VWAFGDG---DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4262
Query: 192 GYNEYGQL--GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
G + L GR Q V+ G I V+ G H+ A++ NG+V
Sbjct: 4263 GQDRLIGLPEGRARNHNRPQQVPVLAGVV-----------IEDVAVGAEHTLALASNGDV 4311
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWG 308
Y WG S GQLG L + P V L G ++ ++ G HS A T+ A G
Sbjct: 4312 YAWGSNSEGQLG---LGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPVPPRAPG 4368
Query: 309 GSQAGQLGL 317
S QLGL
Sbjct: 4369 VSVPLQLGL 4377
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P I I +V GS +AL+ G + AW
Sbjct: 583 -VWSFG---GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I VS G+ H A+S + EVY
Sbjct: 639 GCG--ACLGCGSSEATALRPKLIEELAA--------TRIVDVSIGDSHCLALSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDGI I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 30/228 (13%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +GQL G V+ A AP + QV CG+ + + NG V
Sbjct: 4001 WGAGRHGQLAEA-------GRNVMVPAA-----APSFSQAQQVICGQNCTFVIQANGTVL 4048
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGALYAW 307
G GS G+LG + S D +L + AL G + + +CG HS ALT G +++W
Sbjct: 4049 ACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSW 4105
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G R R I L VQ+ +CG H+ V DG++
Sbjct: 4106 GDGDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLF 4155
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
+G YG+ ++ P V G ++ ++A G H+ AV AD
Sbjct: 4156 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 4203
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VSE EVY WG S QL G +E + + +A + + G + +++ G
Sbjct: 368 VSETCEVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ A G G+LGLG +L + + R+I + G HTL +
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RSIKKVSSSKG------SDGHTLAFTT 475
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+G + WG YG+ + S+ YP + + G+V ++AG HSA + +
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
>gi|418738679|ref|ZP_13295072.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
borgpetersenii serovar Castellonis str. 200801910]
gi|410745377|gb|EKQ98287.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
borgpetersenii serovar Castellonis str. 200801910]
Length = 506
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 169/395 (42%), Gaps = 94/395 (23%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHC 125
++ G H+ + +G ++T G N FGQLG G G ++ + + +L S + SI +
Sbjct: 131 LSAGGAHSGFL-KNGEVYTVGRNNFGQLGTGNSTGDENNDVIVKLNSISNIFSIHFNQNN 189
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQ------GSNF-----PRLFWGAFTPNTIICQV-- 172
+ AIA+ R++ WG N G+N PR G P T++ +
Sbjct: 190 SMAIAK---------NGRVYTWGNNAKGQLGIGNNNTNPANPRA-AGNRQPPTLVPGIND 239
Query: 173 ----SCGSVHVVALSECGLLQAWGYNEYGQLGRG---ITCEGL-QGPRVIKGYAKFLDEA 224
+ G H + L G + A+G N GQLG G + + P + G
Sbjct: 240 AVMGAYGFNHALILKSDGTVVAFGQNNVGQLGNGANDLNADSFSMDPVAVVG-------- 291
Query: 225 PELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK-ELLPRRVVALDGI 283
L + QV G HSAA++ENGEVY WG G LG+ L + + + P +V L G
Sbjct: 292 --LSDVIQVIAGSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAIQSTPVKVEGLSG- 348
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQ----------------------- 320
IK +A G H AL S G +Y+WG + +GQLG+G
Sbjct: 349 -IKQIANGRDHILALASDGRIYSWGLNASGQLGIGGNGSPNPTPNPTQILNIKNASSVWA 407
Query: 321 --TRSFSLIPN------------------ESDT---YFRNIPILVVPNGVQLVACGHSHT 357
T+SFS++ N E++T Y N ++ + N + CG +H
Sbjct: 408 GGTQSFSILKNGEVKGWGANGNTANLAIGETNTLKVYEPNKAVVGIDNVIHF-GCGATHN 466
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKSTYAW-YPSPV 391
+ DG I+GWG+N G + W P+PV
Sbjct: 467 FALLGDGEIYGWGWNFKGSLGRQDLQANWGAPNPV 501
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 131/322 (40%), Gaps = 49/322 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPK----QLPPELFGCPAGANSRWLDIACGHE 72
I +Y WG N GQ G P+ + PP L G N + A G
Sbjct: 193 IAKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLV---PGINDAVMG-AYGFN 248
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHP---EKVKQLQSEFVKSISCGAHCTAAI 129
H + SDGT+ +G N GQLG+G + + V + V + G+ +AA+
Sbjct: 249 HALILKSDGTVVAFGQNNVGQLGNGANDLNADSFSMDPVAVVGLSDVIQVIAGSEHSAAL 308
Query: 130 AEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAF-----TPNTI-----ICQVSCGSVHV 179
E E ++VWG+NQ N A TP + I Q++ G H+
Sbjct: 309 TENGE---------VYVWGRNQYGNLGNGRLSAANAIQSTPVKVEGLSGIKQIANGRDHI 359
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
+AL+ G + +WG N GQLG G G P + L+ ++ + V G
Sbjct: 360 LALASDGRIYSWGLNASGQLGIG----GNGSPNPTPNPTQILN----IKNASSVWAGGTQ 411
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLP-----RRVVALDGIFIKDVACGGVH 294
S ++ +NGEV WG +L G+ L + VV +D + CG H
Sbjct: 412 SFSILKNGEVKGWGANG----NTANLAIGETNTLKVYEPNKAVVGIDNVI--HFGCGATH 465
Query: 295 SCALTSKGALYAWGGSQAGQLG 316
+ AL G +Y WG + G LG
Sbjct: 466 NFALLGDGEIYGWGWNFKGSLG 487
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 108/274 (39%), Gaps = 56/274 (20%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + + +G N+ GQ G + P + G S + + G EH+AA
Sbjct: 253 LKSDGTVVAFGQNNVGQLGNGANDLNADSFSMDPVAVVGL-----SDVIQVIAGSEHSAA 307
Query: 77 VASDGTLFTWGANEFGQLGDGTEEG----RKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
+ +G ++ WG N++G LG+G + P KV+ L +K I+ G A+A
Sbjct: 308 LTENGEVYVWGRNQYGNLGNGRLSAANAIQSTPVKVEGLSG--IKQIANGRDHILALA-- 363
Query: 133 RENDGTISTSRLWVWGQN---------QGSNFPRLFWGAFTPN-TIICQVS------CGS 176
S R++ WG N GS P TPN T I + G
Sbjct: 364 -------SDGRIYSWGLNASGQLGIGGNGSPNP-------TPNPTQILNIKNASSVWAGG 409
Query: 177 VHVVALSECGLLQAWGYNEYG---QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
++ + G ++ WG N +G T + + + + G ++ +
Sbjct: 410 TQSFSILKNGEVKGWGANGNTANLAIGETNTLKVYEPNKAVVG----------IDNVIHF 459
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQS 267
CG H+ A+ +GE+Y WG G LG LQ+
Sbjct: 460 GCGATHNFALLGDGEIYGWGWNFKGSLGRQDLQA 493
>gi|380792513|gb|AFE68132.1| RCC1 and BTB domain-containing protein 2, partial [Macaca mulatta]
Length = 369
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 112/227 (49%), Gaps = 22/227 (9%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H+V + G + WG+N Y QLG G T GL ++ + +++ +V+CG
Sbjct: 110 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSN--------KQVIEVACGS 161
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHSC 296
YHS ++ +GEV+ WG + GQ+G S + +PRRV L + +ACG +
Sbjct: 162 YHSLVLTSDGEVFAWGYNNSGQVGS---GSTVNQPIPRRVTGCLQNKVVVTIACGQMCCM 218
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G +Y WG + GQLGLG + + R VQ VACG++H
Sbjct: 219 AVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR----------VQRVACGYAH 268
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 403
TLV +G+++ WG NSYGQ + YP+PV + ++AA
Sbjct: 269 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTMEKDRIIEIAA 315
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 135/303 (44%), Gaps = 49/303 (16%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTAAIAEPRENDGTIS 140
+F G N G LG G + P ++ L + + S+S G+ H A E
Sbjct: 67 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTE--------- 117
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVS------------CGSVHVVALSECGLL 188
++ WG N + +L G + CQ+S CGS H + L+ G +
Sbjct: 118 -GEVFTWGHNA---YSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEV 173
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
AWGYN GQ+G G T PR + G + + + ++CG+ AV + GE
Sbjct: 174 FAWGYNNSGQVGSGSTVN-QPIPRRVTG-------CLQNKVVVTIACGQMCCMAVVDTGE 225
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
VY WG GQLG L S + P RV AL GI ++ VACG H+ LT +G +YAWG
Sbjct: 226 VYVWGYNGNGQLG---LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRIH 367
+ GQLG G N+S+ + + +++ AC +HT + G ++
Sbjct: 283 ANSYGQLGTG----------NKSNQSYPTPVTMEKDRIIEIAACHSTHTSAAKTQGGHVY 332
Query: 368 GWG 370
WG
Sbjct: 333 MWG 335
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 114/242 (47%), Gaps = 37/242 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G +P Q+ L +N + +++ACG H+ + SDG
Sbjct: 120 VFTWGHNAYSQLG-NGTTNHGLVPCQISTNL------SNKQVIEVACGSYHSLVLTSDGE 172
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P +V LQ++ V +I+CG C A+ + T
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAV---------VDT 223
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N N P A + +V+CG H + L++ G + AWG
Sbjct: 224 GEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 283
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVYT 251
N YGQLG G + + Y + E ++I ++ +C H SAA ++ G VY
Sbjct: 284 NSYGQLGT--------GNKSNQSYPTPVTM--EKDRIIEIAACHSTHTSAAKTQGGHVYM 333
Query: 252 WG 253
WG
Sbjct: 334 WG 335
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 20/151 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G Q P A R +ACG+ HT + +G
Sbjct: 226 VYVWGYNGNGQLGLGSSGNQ--------PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 277
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
++ WGAN +GQLG G + + +P V + ++ +C H +AA +
Sbjct: 278 VYAWGANSYGQLGTGNKSNQSYPTPVTMEKDRIIEIAACHSTHTSAAKTQ---------G 328
Query: 142 SRLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 329 GHVYMWGQCRGQSVILPHLTHFSCTDDVFAC 359
>gi|356539788|ref|XP_003538375.1| PREDICTED: uncharacterized protein LOC100794953 [Glycine max]
Length = 1046
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 155/344 (45%), Gaps = 44/344 (12%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+L A + +IA G +H A V G +F WG ++G+LG + P+ V
Sbjct: 293 LVPKLLESTAMLDVH--NIALGGKHAALVTKQGEVFCWGQGKWGRLGQKIDMDISSPKIV 350
Query: 109 KQLQSEFVKSISCGAHCTAAIAEPRE-----NDGTISTSRLWVWGQNQGSNFPRLFWGAF 163
L VK+++CG + T A+ + E ND + + L G+ + P+ G
Sbjct: 351 DSLNGLHVKTVACGEYHTCALTDSGEVYTWGND--VCCADLLNEGRTRSQWIPQRLGGPL 408
Query: 164 TPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDE 223
I V+CG H +S CG L +G +G LG G P+ ++
Sbjct: 409 D-GISISSVACGEWHTAIVSSCGRLFTYGDGTFGVLGHG-DLRSYSSPKEVESLNGL--- 463
Query: 224 APELEKITQVSCGEYHSAAVSE-----------NGEVYTWGLGSVGQLGHCSLQSGDKEL 272
++ +CG +H+AA+ E +G+++TWG G G+LGH + +G+K +
Sbjct: 464 -----RVRSAACGSWHTAAIVEVMFDRFRYNSASGKLFTWGDGDEGRLGH--VDNGNK-I 515
Query: 273 LPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESD 332
+P RV L V+CG + + ALT+ G ++A G ++ GQLG P R +I
Sbjct: 516 VPTRVTQLVDYDFVQVSCGRMLTVALTNMGKVFAMGSAKYGQLG-NPHARDKVVI----- 569
Query: 333 TYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+ + V++++ G H V G ++ WG GQ
Sbjct: 570 -----VEGQLKQEFVKVISTGSYHVAVLTSAGSVYTWGRGEIGQ 608
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 131/287 (45%), Gaps = 30/287 (10%)
Query: 23 IYVWGYNHS-GQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG + +GR R IP++L L G + +ACG HTA V+S G
Sbjct: 377 VYTWGNDVCCADLLNEGRTRSQWIPQRLGGPLDGISISS------VACGEWHTAIVSSCG 430
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
LFT+G FG LG G P++V+ L V+S +CG+ TAAI E + ++
Sbjct: 431 RLFTYGDGTFGVLGHGDLRSYSSPKEVESLNGLRVRSAACGSWHTAAIVEVMFDRFRYNS 490
Query: 142 S--RLWVWGQNQGSNFPRLFWG-AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+ +L+ WG + G P + QVSCG + VAL+ G + A
Sbjct: 491 ASGKLFTWGDGDEGRLGHVDNGNKIVPTRVTQLVDYDFVQVSCGRMLTVALTNMGKVFAM 550
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +YGQLG + + +++G K E + +S G YH A ++ G VYT
Sbjct: 551 GSAKYGQLGNPHARDKVV---IVEGQLK-------QEFVKVISTGSYHVAVLTSAGSVYT 600
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
WG G +GQLG L + P V AL + + CG + A+
Sbjct: 601 WGRGEIGQLG---LGDTEDRYTPCFVEALRDRQVNTITCGPSFTAAI 644
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 100/217 (46%), Gaps = 18/217 (8%)
Query: 202 GITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG 261
GI E P + K L+ L+ + ++ G H+A V++ GEV+ WG G G+LG
Sbjct: 279 GIVNERFVHPGIYSLVPKLLESTAMLD-VHNIALGGKHAALVTKQGEVFCWGQGKWGRLG 337
Query: 262 HCSLQSGDKEL-LPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ--AGQLGLG 318
Q D ++ P+ V +L+G+ +K VACG H+CALT G +Y WG A L G
Sbjct: 338 ----QKIDMDISSPKIVDSLNGLHVKTVACGEYHTCALTDSGEVYTWGNDVCCADLLNEG 393
Query: 319 PQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
+TRS IP I I VACG HT + GR+ +G ++G
Sbjct: 394 -RTRS-QWIPQRLGGPLDGISI-------SSVACGEWHTAIVSSCGRLFTYGDGTFGVLG 444
Query: 379 NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADA 414
+ P V+ G VR A G H+A + +
Sbjct: 445 HGDLRSYSSPKEVESLNGLRVRSAACGSWHTAAIVEV 481
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 78/176 (44%), Gaps = 25/176 (14%)
Query: 248 EVYTWGLGS---VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
+V WG G VG + + G L+P+ + + + + ++A GG H+ +T +G +
Sbjct: 266 DVMIWGGGIGCLVGIVNERFVHPGIYSLVPKLLESTAMLDVHNIALGGKHAALVTKQGEV 325
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG--VQLVACGHSHTLVYMR 362
+ WG + G+LG + D + I+ NG V+ VACG HT
Sbjct: 326 FCWGQGKWGRLG------------QKIDMDISSPKIVDSLNGLHVKTVACGEYHTCALTD 373
Query: 363 DGRIHGWGYN-SYGQAANEKSTYA-WYPS----PVDWCVGEVRKLAAGGGHSAVLA 412
G ++ WG + NE T + W P P+D + +A G H+A+++
Sbjct: 374 SGEVYTWGNDVCCADLLNEGRTRSQWIPQRLGGPLDGI--SISSVACGEWHTAIVS 427
>gi|332233496|ref|XP_003265938.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
[Nomascus leucogenys]
Length = 1020
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 120/238 (50%), Gaps = 19/238 (7%)
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
VSCG H +A+ G + AWG GQLG G E P+ I KI
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEISFTPKKITTLNGI--------KII 131
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
QVSCG YHS A+S++ +V++WG S GQLG + + P+RV +L+GI + VA G
Sbjct: 132 QVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAG 189
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN-GVQLV 350
G HS AL+ G + WG + AGQL L + +P +S+ + + + + N GV +
Sbjct: 190 GAHSFALSLCGTSFGWGSNSAGQLALSGRN-----VPVQSN---KPLSVGALKNLGVVYI 241
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
+CG HT V +DG++ +G N GQ + P V+ G V ++ G H+
Sbjct: 242 SCGAEHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVEIIDGLVSQVDCGSYHT 299
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 140/318 (44%), Gaps = 40/318 (12%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
L A G H+ + ++ + + G N GQLG + PE ++ L++ V +SCG
Sbjct: 26 LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDLVSCGKE 85
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSNFP--RLFWGAFTPNTI-------ICQVSCG 175
+ A+ R++ WG L +FTP I I QVSCG
Sbjct: 86 HSLAVCH---------KGRVFAWGAGSEGQLGIGELKEISFTPKKITTLNGIKIIQVSCG 136
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
H +ALS+ + +WG N +GQLG G P+ ++ L+ P + QV+
Sbjct: 137 HYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRS----LEGIP----LAQVAA 188
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
G HS A+S G + WG S GQL + P V AL + + ++CG H+
Sbjct: 189 GGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHT 248
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG-VQLVACGH 354
LT G ++ +G +++GQLG P R ++ + +G V V CG
Sbjct: 249 AVLTQDGKVFTFGDNRSGQLGYSPTPEK------------RGPQLVEIIDGLVSQVDCGS 296
Query: 355 SHTLVYMR-DGRIHGWGY 371
HTL Y+ G++ +G+
Sbjct: 297 YHTLAYVHTTGQVVSFGH 314
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 136/310 (43%), Gaps = 58/310 (18%)
Query: 27 GYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTW 86
G N GQ GR+G P+ PE N ++CG EH+ AV G +F W
Sbjct: 48 GDNSRGQLGRRG------APRGELPEPIQALETLNVDL--VSCGKEHSLAVCHKGRVFAW 99
Query: 87 GANEFGQLGDG-TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLW 145
GA GQLG G +E P+K+ L + +SCG + + A+++ S+++
Sbjct: 100 GAGSEGQLGIGELKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK---------DSQVF 150
Query: 146 VWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWG 192
WG+N G FP +P + + QV+ G H ALS CG WG
Sbjct: 151 SWGKNSHGQLGLGKEFP----SQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWG 206
Query: 193 YNEYGQL---GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
N GQL GR + + + V G K L + +SCG H+A ++++G+V
Sbjct: 207 SNSAGQLALSGRNVPVQSNKPLSV--GALKNLG-------VVYISCGAEHTAVLTQDGKV 257
Query: 250 YTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGG 309
+T+G GQLG+ ++ P+ V +DG+ + V CG H+ A Y
Sbjct: 258 FTFGDNRSGQLGY---SPTPEKRGPQLVEIIDGL-VSQVDCGSYHTLA-------YVHTT 306
Query: 310 SQAGQLGLGP 319
Q G GP
Sbjct: 307 GQVVSFGHGP 316
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 121/242 (50%), Gaps = 25/242 (10%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG GQ G G +++ + L G + + ++CGH H+ A++
Sbjct: 93 KGRVFAWGAGSEGQLG-IGELKEISFTPKKITTLNGI------KIIQVSCGHYHSLALSK 145
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISC-GAHCTA-AIAEPREND 136
D +F+WG N GQLG G E + P++V+ L+ + ++ GAH A ++
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW 205
Query: 137 GTISTSRLWVWGQN--QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
G+ S +L + G+N SN P L GA N + +SCG+ H L++ G + +G N
Sbjct: 206 GSNSAGQLALSGRNVPVQSNKP-LSVGALK-NLGVVYISCGAEHTAVLTQDGKVFTFGDN 263
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEVYTWG 253
GQLG T E +GP+++ + +D ++QV CG YH+ A V G+V ++G
Sbjct: 264 RSGQLGYSPTPEK-RGPQLV----EIIDGL-----VSQVDCGSYHTLAYVHTTGQVVSFG 313
Query: 254 LG 255
G
Sbjct: 314 HG 315
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 60/146 (41%), Gaps = 14/146 (9%)
Query: 270 KELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPN 329
+EL RR G + A G HS L + + + G + GQLG R +P
Sbjct: 10 RELQRRRTEGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPR--GELPE 67
Query: 330 ESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ-AANEKSTYAWY 387
PI + V LV+CG H+L GR+ WG S GQ E ++
Sbjct: 68 ---------PIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEISFT 118
Query: 388 PSPVDWCVG-EVRKLAAGGGHSAVLA 412
P + G ++ +++ G HS L+
Sbjct: 119 PKKITTLNGIKIIQVSCGHYHSLALS 144
>gi|218188915|gb|EEC71342.1| hypothetical protein OsI_03406 [Oryza sativa Indica Group]
Length = 848
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 166/390 (42%), Gaps = 65/390 (16%)
Query: 14 VDNIPAKSAIYVWG------YNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLD- 66
D+I + +YVWG G T + + IPK L ++ LD
Sbjct: 209 TDDIESLGDVYVWGEVWTDVTPSDGHTSSSCSKVDVLIPKPLESDVV----------LDV 258
Query: 67 --IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
IACG H A G +FTWG G+LG GT+ P+ V+ L V ISCG
Sbjct: 259 NQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDLISCGEF 318
Query: 125 CTAAIAEPRE----NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVV 180
T A+ + DG+ + L G P+ G ++ V+CGS H
Sbjct: 319 HTCAVTTSGDLFNWGDGSYNVGLLGC-GTEVSYWLPKKVSGPLEGLQVL-SVACGSWHSA 376
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
+ G L +G +G LG G E L P+ ++ + F K +V+CG +HS
Sbjct: 377 LTTSSGKLYTFGDGTFGVLGHGDR-ETLAYPKEVEALSGF--------KTIKVACGIWHS 427
Query: 241 AAVSE----------NGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDV 288
AA+ E + ++YTWG G +LGH GDKE L+P+ V AL +
Sbjct: 428 AAIVEVTNQTGANVMSKKLYTWGDGDKNRLGH-----GDKEPRLVPKCVQALLEYDFHQL 482
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQT--RSFSLIPNESDTYFRNIPILVVPNG 346
ACG + AL + G ++ G S GQLG P++ + L+ + +
Sbjct: 483 ACGHNMTVALATSGRVFTMGSSSNGQLG-NPKSDGKQPCLVQDR-----------LASEL 530
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
V+ ++CG SH V ++ WG + G+
Sbjct: 531 VEEISCGASHVTVLTSRSEVYTWGMGANGR 560
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 118/268 (44%), Gaps = 37/268 (13%)
Query: 38 GRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDG 97
G E +PK++ L G L +ACG H+A S G L+T+G FG LG G
Sbjct: 345 GTEVSYWLPKKVSGPLEGLQV------LSVACGSWHSALTTSSGKLYTFGDGTFGVLGHG 398
Query: 98 TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG-TISTSRLWVWGQ------N 150
E +P++V+ L ++CG +AAI E G + + +L+ WG
Sbjct: 399 DRETLAYPKEVEALSGFKTIKVACGIWHSAAIVEVTNQTGANVMSKKLYTWGDGDKNRLG 458
Query: 151 QGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGI 203
G PRL P + Q++CG VAL+ G + G + GQLG
Sbjct: 459 HGDKEPRL-----VPKCVQALLEYDFHQLACGHNMTVALATSGRVFTMGSSSNGQLG--- 510
Query: 204 TCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHC 263
P+ + + E + ++SCG H ++ EVYTWG+G+ G+LGH
Sbjct: 511 ------NPKSDGKQPCLVQDRLASELVEEISCGASHVTVLTSRSEVYTWGMGANGRLGHG 564
Query: 264 SLQSGDKELLPRRVVALDGIFIKDVACG 291
L+ K P V AL +K ++CG
Sbjct: 565 DLKDRKK---PCLVEALKDRHVKSISCG 589
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 60/126 (47%), Gaps = 14/126 (11%)
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
+I+CG H + S ++TWG G+LG G + RK P V+ L+ VKSISCG++
Sbjct: 533 EISCGASHVTVLTSRSEVYTWGMGANGRLGHGDLKDRKKPCLVEALKDRHVKSISCGSNF 592
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGS-NFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
T I + WV G +Q R +G FT C +CG VH A S
Sbjct: 593 TTCICIHK-----------WVSGADQSVCTGCRQAFG-FTRKRHDC-YNCGLVHCHACSS 639
Query: 185 CGLLQA 190
+L+A
Sbjct: 640 RKVLKA 645
>gi|328715082|ref|XP_001946768.2| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Acyrthosiphon
pisum]
Length = 4404
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 135/289 (46%), Gaps = 35/289 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R + P+L + ++ +DIACG H+AA++ G
Sbjct: 3654 VYAWGDGDDGKLGLGNRVTHSK------PQL--VQSLSDKCIIDIACGGFHSAAISRYGH 3705
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG G E +P+ V+ L + V ++CG+ + S
Sbjct: 3706 LYTWGKGRYGRLGHGDYEDYLYPKLVQGLINYHVVKVACGSGDAQTMC-------VTSDD 3758
Query: 143 RLWVWGQ-NQGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
+W WG + G + P I I Q+ CGS VALS G L WG
Sbjct: 3759 NVWSWGDGDYGKLGHNISESCKLPCKIESLSGKGIIQIDCGSQFSVALSANGTLYTWGKG 3818
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + E ++ P+ + G + +KI Q S G H A++++GEVY WG
Sbjct: 3819 DYFRLGHG-SSEHVRKPKPVSGL--------QGKKIVQFSTGSLHVLALTDDGEVYAWGD 3869
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
GQLG + + PR + AL G I+ V+CG HS A S+ A
Sbjct: 3870 NDEGQLGDGTAHPIAR---PRPIAALKGKRIQQVSCGSAHSFAWASEEA 3915
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 157/358 (43%), Gaps = 51/358 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y GY SG+ G + P + P+L N + + G H A+++ G
Sbjct: 3598 VYASGYTESGRLGIGPYNP--KNPYVVTPQL--VQGLNNIIKVAVNSGGRHCLALSTTGE 3653
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WG + G+LG G P+ V+ L + + I+CG +AAI+
Sbjct: 3654 VYAWGDGDDGKLGLGNRVTHSKPQLVQSLSDKCIIDIACGGFHSAAISR---------YG 3704
Query: 143 RLWVWGQNQGSN----------FPRLFWGAFTPNTIICQVSCGS--VHVVALSECGLLQA 190
L+ WG+ + +P+L G N + +V+CGS + ++ + +
Sbjct: 3705 HLYTWGKGRYGRLGHGDYEDYLYPKLVQGLI--NYHVVKVACGSGDAQTMCVTSDDNVWS 3762
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +YG+LG I+ E + P I+ + + I Q+ CG S A+S NG +Y
Sbjct: 3763 WGDGDYGKLGHNIS-ESCKLPCKIESLSG--------KGIIQIDCGSQFSVALSANGTLY 3813
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
TWG G +LGH S + K P+ V L G I + G +H ALT G +YAWG +
Sbjct: 3814 TWGKGDYFRLGHGSSEHVRK---PKPVSGLQGKKIVQFSTGSLHVLALTDDGEVYAWGDN 3870
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIH 367
GQLG G + R PI + +Q V+CG +H+ + + H
Sbjct: 3871 DEGQLGDGT-----------AHPIARPRPIAALKGKRIQQVSCGSAHSFAWASEEACH 3917
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 174/416 (41%), Gaps = 66/416 (15%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+YVWG+NH GQ Q++ P C + + + + G + AV S G
Sbjct: 3545 VVYVWGHNHRGQLACMDSS-QVKKP-------LACDSLSVLKPTQVIGGEQTMFAVTSYG 3596
Query: 82 TLFTWGANEFGQLGDGTEEGRK----HPEKVKQLQSEFVKSI-SCGAHCTAAIAEPREND 136
++ G E G+LG G + P+ V+ L + ++ S G HC A
Sbjct: 3597 KVYASGYTESGRLGIGPYNPKNPYVVTPQLVQGLNNIIKVAVNSGGRHCLALS------- 3649
Query: 137 GTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
+T ++ WG P+L + I ++CG H A+S G
Sbjct: 3650 ---TTGEVYAWGDGDDGKLGLGNRVTHSKPQLVQSL--SDKCIIDIACGGFHSAAISRYG 3704
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAVS 244
L WG YG+LG G E P++++G + + +V+CG + + V+
Sbjct: 3705 HLYTWGKGRYGRLGHG-DYEDYLYPKLVQGLINY--------HVVKVACGSGDAQTMCVT 3755
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
+ V++WG G G+LGH +S LP ++ +L G I + CG S AL++ G L
Sbjct: 3756 SDDNVWSWGDGDYGKLGHNISESCK---LPCKIESLSGKGIIQIDCGSQFSVALSANGTL 3812
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLVYMR 362
Y WG +LG G S + R + G ++V + G H L
Sbjct: 3813 YTWGKGDYFRLGHG------------SSEHVRKPKPVSGLQGKKIVQFSTGSLHVLALTD 3860
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA--DAC 415
DG ++ WG N GQ + + P P+ G+ +++++ G HS A +AC
Sbjct: 3861 DGEVYAWGDNDEGQLGDGTAHPIARPRPIAALKGKRIQQVSCGSAHSFAWASEEAC 3916
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 140/308 (45%), Gaps = 49/308 (15%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ G +H A++ DG + +WG E G+LG G P+ + L ++ V I+CG+ +
Sbjct: 2685 VHSGGKHAMALSLDGKVLSWGDGEDGKLGHGDILTLDTPKLIDSLLAKRVFYIACGSAHS 2744
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQ----------GSNFPRLFWGAFTPNTIICQVSCGS 176
AAI S L+ WGQ Q + P+L N I QV+CGS
Sbjct: 2745 AAIT---------SDGELYTWGQGQYGRLGHSDEVSQHTPKLVKEFVGKN--ITQVACGS 2793
Query: 177 --VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
+AL G + +WG ++G+LGRG +G P+ ++ ++ Q+
Sbjct: 2794 RDAQTLALDSEGNVYSWGDGDFGKLGRG-GSDGCCTPQKVERLVG--------HRVVQIE 2844
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVH 294
CG S A++ G+V+TWG G +LG L G+ P V L + I +A G +H
Sbjct: 2845 CGAQFSVALTATGQVWTWGKGEYYRLG---LGRGEHVRRPTLVNQLKLVTIDHIAVGTLH 2901
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQ--TRSFSLIPNESDTYFRNIPILVVPNGVQLVAC 352
A++++G +Y WG + GQ G G + L+ N F NI I V C
Sbjct: 2902 CIAVSTQGDVYCWGDNDHGQQGNGTTNANQEPRLVTN-----FNNIKI-------NRVGC 2949
Query: 353 GHSHTLVY 360
G S ++ +
Sbjct: 2950 GSSQSIAW 2957
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 125/283 (44%), Gaps = 41/283 (14%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFT 85
WG G+ G G L PK + L R IACG H+AA+ SDG L+T
Sbjct: 2704 WGDGEDGKLGH-GDILTLDTPKLIDSLL-------AKRVFYIACGSAHSAAITSDGELYT 2755
Query: 86 WGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLW 145
WG ++G+LG E + P+ VK+ + + ++CG+ +A E + ++
Sbjct: 2756 WGQGQYGRLGHSDEVSQHTPKLVKEFVGKNITQVACGSRDAQTLALDSEGN-------VY 2808
Query: 146 VWGQNQGSNFPRLFWGAF----TPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
WG +F +L G TP + + Q+ CG+ VAL+ G + WG
Sbjct: 2809 SWGD---GDFGKLGRGGSDGCCTPQKVERLVGHRVVQIECGAQFSVALTATGQVWTWGKG 2865
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
EY +LG G E ++ P ++ +L I ++ G H AVS G+VY WG
Sbjct: 2866 EYYRLGLG-RGEHVRRPTLVNQL--------KLVTIDHIAVGTLHCIAVSTQGDVYCWGD 2916
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
GQ G+ + + + PR V + I I V CG S A
Sbjct: 2917 NDHGQQGNGTTNANQE---PRLVTNFNNIKINRVGCGSSQSIA 2956
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 157/377 (41%), Gaps = 55/377 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ ++ A+YVWG N GQ G + R P A + ++I G +
Sbjct: 2589 VDSEYAVYVWGLNDKGQLGGLNGSKVKR------PTF--NEALTALKPIEIVGGSKSLFI 2640
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V+++G +F G + G+LG P ++ L +K+++ H A D
Sbjct: 2641 VSNEGKVFVCGDSSGGRLGIPFCGKVSSPRQIPGLSQFVIKTVA--VHSGGKHAMALSLD 2698
Query: 137 GTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
G + + WG + P+L + ++CGS H A++ G
Sbjct: 2699 GKVLS-----WGDGEDGKLGHGDILTLDTPKLIDSLLAKR--VFYIACGSAHSAAITSDG 2751
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAVS 244
L WG +YG+LG P+++K + + ITQV+CG + + A+
Sbjct: 2752 ELYTWGQGQYGRLGHSDEVSQ-HTPKLVKEFVG--------KNITQVACGSRDAQTLALD 2802
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
G VY+WG G G+LG D P++V L G + + CG S ALT+ G +
Sbjct: 2803 SEGNVYSWGDGDFGKLGR---GGSDGCCTPQKVERLVGHRVVQIECGAQFSVALTATGQV 2859
Query: 305 YAWGGSQAGQLGLG--PQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
+ WG + +LGLG R +L+ + ++ + + +A G H +
Sbjct: 2860 WTWGKGEYYRLGLGRGEHVRRPTLV--------NQLKLVTIDH----IAVGTLHCIAVST 2907
Query: 363 DGRIHGWGYNSYGQAAN 379
G ++ WG N +GQ N
Sbjct: 2908 QGDVYCWGDNDHGQQGN 2924
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 116/259 (44%), Gaps = 33/259 (12%)
Query: 72 EHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
E V S+ ++ WG N+ GQLG K P + L + I G+ ++
Sbjct: 2584 ESKIRVDSEYAVYVWGLNDKGQLGGLNGSKVKRPTFNEALTALKPIEIVGGSKSLFIVS- 2642
Query: 132 PRENDGTISTSRLWVWGQNQGSNFPRLFWGAF-TPNTI---------ICQVSCGSVHVVA 181
N+G +++V G + G F G +P I V G H +A
Sbjct: 2643 ---NEG-----KVFVCGDSSGGRLGIPFCGKVSSPRQIPGLSQFVIKTVAVHSGGKHAMA 2694
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
LS G + +WG E G+LG G L P++I +++ ++CG HSA
Sbjct: 2695 LSLDGKVLSWGDGEDGKLGHG-DILTLDTPKLIDSLLA--------KRVFYIACGSAHSA 2745
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALT 299
A++ +GE+YTWG G G+LGH S + P+ V G I VACG + AL
Sbjct: 2746 AITSDGELYTWGQGQYGRLGHSDEVS---QHTPKLVKEFVGKNITQVACGSRDAQTLALD 2802
Query: 300 SKGALYAWGGSQAGQLGLG 318
S+G +Y+WG G+LG G
Sbjct: 2803 SEGNVYSWGDGDFGKLGRG 2821
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 125/284 (44%), Gaps = 39/284 (13%)
Query: 144 LWVWGQN--------QGSNFPR-LFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
++VWG N GS R F A T I ++ GS + +S G + G +
Sbjct: 2595 VYVWGLNDKGQLGGLNGSKVKRPTFNEALTALKPI-EIVGGSKSLFIVSNEGKVFVCGDS 2653
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
G+LG C + PR I G ++F+ K V G H+ A+S +G+V +WG
Sbjct: 2654 SGGRLGIPF-CGKVSSPRQIPGLSQFVI------KTVAVHSGGKHAMALSLDGKVLSWGD 2706
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
G G+LGH + + D P+ + +L + +ACG HS A+TS G LY WG Q G+
Sbjct: 2707 GEDGKLGHGDILTLDT---PKLIDSLLAKRVFYIACGSAHSAAITSDGELYTWGQGQYGR 2763
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILV---VPNGVQLVACG--HSHTLVYMRDGRIHGW 369
LG SD ++ P LV V + VACG + TL +G ++ W
Sbjct: 2764 LG-------------HSDEVSQHTPKLVKEFVGKNITQVACGSRDAQTLALDSEGNVYSW 2810
Query: 370 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLA 412
G +G+ S P V+ VG V ++ G S L
Sbjct: 2811 GDGDFGKLGRGGSDGCCTPQKVERLVGHRVVQIECGAQFSVALT 2854
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 113/235 (48%), Gaps = 36/235 (15%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACG--HEHTAAVA 78
+AI +G+ ++ GR GR L P+L N + +ACG T V
Sbjct: 3698 AAISRYGHLYTWGKGRYGRLGHGDYEDYLYPKL--VQGLINYHVVKVACGSGDAQTMCVT 3755
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
SD +++WG ++G+LG E K P K++ L + + I CG+ + A++ +GT
Sbjct: 3756 SDDNVWSWGDGDYGKLGHNISESCKLPCKIESLSGKGIIQIDCGSQFSVALSA----NGT 3811
Query: 139 ISTSRLWVWGQNQGSNFPRLFWGAF----TPNTI-------ICQVSCGSVHVVALSECGL 187
L+ WG+ ++ RL G+ P + I Q S GS+HV+AL++ G
Sbjct: 3812 -----LYTWGK---GDYFRLGHGSSEHVRKPKPVSGLQGKKIVQFSTGSLHVLALTDDGE 3863
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
+ AWG N+ GQLG G T + PR I A + ++I QVSCG HS A
Sbjct: 3864 VYAWGDNDEGQLGDG-TAHPIARPRPIA--------ALKGKRIQQVSCGSAHSFA 3909
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 106/247 (42%), Gaps = 39/247 (15%)
Query: 72 EHTAAVASDGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIA 130
E AV G +++WG NEFG LG G + PE + V +SCG AA+
Sbjct: 502 ETYLAVTQKGEVYSWGVNEFGALGHGQKYSSFPTPEPIVAFSKLIVVMVSCGKDFCAAVT 561
Query: 131 EPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-------ICQVSCGSV--HVVA 181
E DG +L++WG+ S+ +TP + + +VSCGS + +A
Sbjct: 562 E----DG-----KLYMWGKILHSSN-----CCYTPELVKSISEWHVSKVSCGSSINNTLA 607
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
LS G + ++ EY RG + L VI F E I + C +A
Sbjct: 608 LSREGYVFSF---EYRNSDRGCDDKSLN---VIPSMIVFDYE------IVSIYCHNDVNA 655
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
+ V+TWG G+ LGH + ++ P+ V L G + ++ + ALT
Sbjct: 656 VIDCANNVFTWGRGNNNMLGHNNSFRVNR---PKEVKFLSGKQVTSLSLADDYILALTDT 712
Query: 302 GALYAWG 308
G +Y WG
Sbjct: 713 GQVYCWG 719
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 99/238 (41%), Gaps = 33/238 (13%)
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
+A+++ G + +WG NE+G LG G P I ++K + + VSCG+
Sbjct: 505 LAVTQKGEVYSWGVNEFGALGHGQKYSSFPTPEPIVAFSKLI--------VVMVSCGKDF 556
Query: 240 SAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV--HSCA 297
AAV+E+G++Y WG L S + P V ++ + V+CG ++ A
Sbjct: 557 CAAVTEDGKLYMWGK---------ILHSSNCCYTPELVKSISEWHVSKVSCGSSINNTLA 607
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT 357
L+ +G ++++ + + G +S ++IP+ ++V + + C +
Sbjct: 608 LSREGYVFSFEYRNSDR---GCDDKSLNVIPS----------MIVFDYEIVSIYCHNDVN 654
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADA 414
V + WG + + S P V + G +V L+ + L D
Sbjct: 655 AVIDCANNVFTWGRGNNNMLGHNNSFRVNRPKEVKFLSGKQVTSLSLADDYILALTDT 712
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 96/244 (39%), Gaps = 38/244 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL--DIACGHEHT 74
+ K +Y WG N G G + P+ P A S+ + ++CG +
Sbjct: 507 VTQKGEVYSWGVNEFGALGHGQKYSSFPTPE---------PIVAFSKLIVVMVSCGKDFC 557
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
AAV DG L+ WG T PE VK + V +SCG+ +A RE
Sbjct: 558 AAVTEDGKLYMWGKILHSSNCCYT------PELVKSISEWHVSKVSCGSSINNTLALSRE 611
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVH----VVALSECG-LLQ 189
R ++G + L P+ I+ S++ V A+ +C +
Sbjct: 612 GYVFSFEYR----NSDRGCDDKSL---NVIPSMIVFDYEIVSIYCHNDVNAVIDCANNVF 664
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
WG LG + + P+ + KFL +++T +S + + A+++ G+V
Sbjct: 665 TWGRGNNNMLGHNNSFR-VNRPKEV----KFLSG----KQVTSLSLADDYILALTDTGQV 715
Query: 250 YTWG 253
Y WG
Sbjct: 716 YCWG 719
>gi|126131099|ref|NP_003913.3| probable E3 ubiquitin-protein ligase HERC1 [Homo sapiens]
gi|296434522|sp|Q15751.2|HERC1_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC1; AltName:
Full=HECT domain and RCC1-like domain-containing protein
1; AltName: Full=p532; AltName: Full=p619
gi|119598061|gb|EAW77655.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
sapiens]
gi|119598062|gb|EAW77656.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
sapiens]
Length = 4861
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 173/382 (45%), Gaps = 79/382 (20%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI--- 139
++ WGA GQL E GR + + CG +CT I + +GT+
Sbjct: 3999 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVI----QANGTVLAC 4051
Query: 140 ---STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQV--SCGSV-HVVALSECGLLQAWGY 193
S RL GQ + L + ++ Q+ SCGS H +AL+E G + +WG
Sbjct: 4052 GEGSYGRL---GQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
+YG+LG G + + PR I EA + E++ Q+SCG HSA V+ +G+++T+G
Sbjct: 4109 GDYGKLGHG-NSDRQRRPRQI--------EALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4159
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL-YAWGGSQA 312
G G+LG L + + LP RV AL+G I VACG H+ A+++ G++ +A+G
Sbjct: 4160 NGDYGRLG---LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4216
Query: 313 GQLGLGPQTRSFSLIPNESDTY--------------------------FRNIPILVVPNG 346
G+LGLG T S P + D F ++ +P G
Sbjct: 4217 GKLGLGNSTAKSS--PQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4274
Query: 347 ------------------VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYP 388
++ VA G HTL +G ++ WG NS GQ + + P
Sbjct: 4275 RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP 4334
Query: 389 SPVDWCVGE-VRKLAAGGGHSA 409
+ V G+ VR+++AG HSA
Sbjct: 4335 TLVTGLQGKNVRQISAGRCHSA 4356
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 182/405 (44%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ PK P + S I G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQ-PKLAP---------SFSDAQTIEAGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG----T 138
+ G +G+LG G + +K+L E +SI ++ + +DG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQS---TLKKLTFEPHRSIK-------KVSSSKGSDGHTLAF 473
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ ++ WG + +P+L G ++C VS G H A++E G L
Sbjct: 474 TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGEL 532
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G + P ++K ++ + +VSCG H+ A+S++G
Sbjct: 533 YTWGEGDFGRLGHGDS-NSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 581
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ + AL G+FI+ V G S ALTS G +Y
Sbjct: 582 TVWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVY 636
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V V+ G SH L D
Sbjct: 637 AWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-VSIGDSHCLALSHDNE 685
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 166/377 (44%), Gaps = 85/377 (22%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPP-------- 51
MD + T+RP D ++ K +Y+WG GQ GR + +P P
Sbjct: 3976 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMVPAAAPSFSQAQQVI 4033
Query: 52 -------------ELFGCPAGANSRW------------------------LDIACGHE-H 73
+ C G+ R L +CG + H
Sbjct: 4034 CGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGH 4093
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
+ A+ G +F+WG ++G+LG G + ++ P +++ LQ E V +SCG +A +
Sbjct: 4094 SMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT--- 4150
Query: 134 ENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-----------ICQVSCGSVHVVAL 182
+DG +L+ +G ++ RL G + + I QV+CG H +A+
Sbjct: 4151 -SDG-----KLFTFGNG---DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV 4201
Query: 183 SECG-LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
S G ++ A+G +YG+LG G P+ I I +V+CG S
Sbjct: 4202 SADGSMVWAFGDGDYGKLGLG-NSTAKSSPQKIDVLCGI--------GIKKVACGTQFSV 4252
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A++++G VYT+G + L ++ ++ P+++ L G+ I+DVA G H+ AL S
Sbjct: 4253 ALTKDGHVYTFGQDRLIGLPEGRARNHNR---PQQIPVLAGVIIEDVAVGAEHTLALASN 4309
Query: 302 GALYAWGGSQAGQLGLG 318
G +YAWG + GQLGLG
Sbjct: 4310 GDVYAWGSNSEGQLGLG 4326
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 143/307 (46%), Gaps = 43/307 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V SDG
Sbjct: 4103 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTSDGK 4154
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG++
Sbjct: 4155 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA----DGSM--- 4207
Query: 143 RLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T P I I +V+CG+ VAL++ G + +
Sbjct: 4208 -VWAFGDG---DYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4263
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ I A + I V+ G H+ A++ NG+VY
Sbjct: 4264 GQDRLIGLPEG-RARNHNRPQQIPVLAGVI--------IEDVAVGAEHTLALASNGDVYA 4314
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWGGS 310
WG S GQLG L + P V L G ++ ++ G HS A T+ A G S
Sbjct: 4315 WGSNSEGQLG---LGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVS 4371
Query: 311 QAGQLGL 317
QLGL
Sbjct: 4372 VPLQLGL 4378
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P I I +V GS +AL+ G + AW
Sbjct: 583 -VWSFG---GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I VS G+ H A+S + EVY
Sbjct: 639 GCG--ACLGCGSSEATALRPKLIEELAA--------TRIVDVSIGDSHCLALSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDGI I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 30/228 (13%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +GQL G V+ A AP + QV CG+ + + NG V
Sbjct: 4002 WGAGRHGQLAEA-------GRNVMVPAA-----APSFSQAQQVICGQNCTFVIQANGTVL 4049
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGALYAW 307
G GS G+LG + S D +L + AL G + + +CG HS ALT G +++W
Sbjct: 4050 ACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSW 4106
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G R R I L VQ+ +CG H+ V DG++
Sbjct: 4107 GDGDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLF 4156
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
+G YG+ ++ P V G ++ ++A G H+ AV AD
Sbjct: 4157 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 4204
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VSE EVY WG S QL G +E + + +A + + G + +++ G
Sbjct: 368 VSETCEVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ A G G+LGLG +L + + R+I + G HTL +
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RSIKKVSSSKG------SDGHTLAFTT 475
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+G + WG YG+ + S+ YP + + G+V ++AG HSA + +
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
>gi|47214126|emb|CAG01384.1| unnamed protein product [Tetraodon nigroviridis]
Length = 4628
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + IY G +G+ G + IP+Q+ + + + + G H A
Sbjct: 2778 VTVEGKIYACGEATNGRLGLGLSSGTIPIPRQI-----TALSNYVVKKVAVHSGGRHAMA 2832
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AAI
Sbjct: 2833 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKAKRIRDIACGSSHSAAIT------ 2886
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 2887 ---SSGELYSWGLGE---YGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALT 2940
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 2941 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 2991
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH + K P+ V L G I VA G +H A+T G
Sbjct: 2992 TKSGVVWTWGKGDYFRLGHGTDVHVRK---PQMVEGLRGKKIVHVAVGALHCLAVTDTGQ 3048
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 3049 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3095
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 134/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 2839 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKAKRIRDIACGSSHSAAITSSGE 2890
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L++WG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 2891 LYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEG------- 2943
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 2944 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3000
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P++++G +KI V+ G H AV++ G+VY
Sbjct: 3001 GKGDYFRLGHGTDVH-VRKPQMVEGLRG--------KKIVHVAVGALHCLAVTDTGQVYA 3051
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3052 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3097
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 175/409 (42%), Gaps = 63/409 (15%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
++ ++VWG N Q G L+ K P + N + +A G + AV
Sbjct: 2729 RTKVFVWGLNDKDQLG------GLKGSKIKVPSFSETLSALNV--VQVAGGSKSLFAVTV 2780
Query: 80 DGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPREN 135
+G ++ G G+LG G G P ++ L + VK ++ G H A
Sbjct: 2781 EGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTV----- 2835
Query: 136 DGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
DG +++ WG+ PRL I ++CGS H A++
Sbjct: 2836 DG-----KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKAKR--IRDIACGSSHSAAITSS 2888
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAV 243
G L +WG EYG+LG G L+ P+++K ++ QV+CG + + A+
Sbjct: 2889 GELYSWGLGEYGRLGHGDNTTQLR-PKLVKVLLG--------HRVIQVACGSRDAQTLAL 2939
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
++ G V++WG G G+LG + + +P+ + L+G + + CG S ALT G
Sbjct: 2940 TDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTKSGV 2996
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLVYM 361
++ WG +LG G +D + R ++ G ++V A G H L
Sbjct: 2997 VWTWGKGDYFRLGHG------------TDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVT 3044
Query: 362 RDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
G+++ WG N +GQ N +T P+ V G+ + ++A G HS
Sbjct: 3045 DTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3093
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 128/260 (49%), Gaps = 41/260 (15%)
Query: 72 EHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQ----SEFVKSISCGAHCTA 127
+H A++S+G +F+WG + G+LG G + P + + V I+CG+ +A
Sbjct: 468 QHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPTMIAAFNGKQAGKHVVHIACGSTYSA 527
Query: 128 AIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGA----FTPNTI-------ICQVSCGS 176
AI DG L+ WG+ N+ RL G+ TP + + V+CGS
Sbjct: 528 AITV----DG-----ELYTWGRG---NYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGS 575
Query: 177 --VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
+A++E G + +WG +YG+LGRG +G + P++++ I +V
Sbjct: 576 GDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLVEKLQDL--------DIVKVC 626
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVH 294
CG S A++++G+VYTWG G +LGH + + P+ + L G + DVA G H
Sbjct: 627 CGSQFSVALTKDGQVYTWGKGDNQRLGH---GTDEHVRFPKLLDTLQGKKVVDVAVGSTH 683
Query: 295 SCALTSKGALYAWGGSQAGQ 314
ALT G +++WG + Q
Sbjct: 684 CLALTDDGEVHSWGSNDKLQ 703
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 126/253 (49%), Gaps = 30/253 (11%)
Query: 134 ENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
E+ GTI T +++VWG N +GS + + QV+ GS + A++
Sbjct: 2723 ESAGTIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2781
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + A G G+LG G++ + PR I + ++ K V G H+ A++
Sbjct: 2782 GKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYV------VKKVAVHSGGRHAMALTV 2835
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS A+TS G LY
Sbjct: 2836 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKAKRIRDIACGSSHSAAITSSGELY 2892
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRD 363
+WG + G+LG G T L P + + +L+ +Q VACG + TL +
Sbjct: 2893 SWGLGEYGRLGHGDNTT--QLRP-------KLVKVLLGHRVIQ-VACGSRDAQTLALTDE 2942
Query: 364 GRIHGWGYNSYGQ 376
G + WG +G+
Sbjct: 2943 GLVFSWGDGDFGK 2955
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 131/306 (42%), Gaps = 52/306 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ ++ +Y WG G+ G R R P + G +DIA G H+A
Sbjct: 3859 LSSEGEVYSWGEAEDGKLGHGNRSPCDR------PRVIESLRGVEV--VDIAAGGAHSAC 3910
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ + G LFTWG +G+LG G E + P+ V LQ V ++CG+ + ++
Sbjct: 3911 ITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDD- 3969
Query: 137 GTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
+W WG R G TP I + +V CGS VAL++ G +
Sbjct: 3970 ------MVWSWGDGDYGKLGRGGSDGCKTPMKIDSLTGLGVIKVECGSQFSVALTKSGAV 4023
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN-- 246
WG +Y +LG G + + ++ PR ++G + +K+ ++ G H +E+
Sbjct: 4024 YTWGKGDYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGR 4074
Query: 247 ---------------GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
GEVYTWG GQLG + + + PR V AL G I VACG
Sbjct: 4075 IKVFQWGLPRWSLGLGEVYTWGDNDEGQLGDGTTNAIQR---PRLVAALQGKKINRVACG 4131
Query: 292 GVHSCA 297
H+ +
Sbjct: 4132 SAHTLS 4137
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 116/241 (48%), Gaps = 25/241 (10%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H +ALS G + +WG + G+LG G T L+ P +I + + + + ++CG
Sbjct: 469 HYLALSSNGEVFSWGCGDGGRLGHGDTTY-LEEPTMIAAF----NGKQAGKHVVHIACGS 523
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHS 295
+SAA++ +GE+YTWG G+ G+LGH S + + P V AL G+ + DVACG +
Sbjct: 524 TYSAAITVDGELYTWGRGNYGRLGH---GSSEDQTTPMLVTALKGLKVVDVACGSGDAQT 580
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQT--RSFSLIPNESDTYFRNIPILVVPNGVQLVACG 353
A+T G +++WG G+LG G ++ L+ D + V CG
Sbjct: 581 LAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDL------------DIVKVCCG 628
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLA 412
++ +DG+++ WG + + + +P +D G +V +A G H L
Sbjct: 629 SQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALT 688
Query: 413 D 413
D
Sbjct: 689 D 689
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 108/429 (25%), Positives = 176/429 (41%), Gaps = 93/429 (21%)
Query: 22 AIYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
IY WG+NH GQ G G E ++++P P E A A R + + G + AV +D
Sbjct: 3758 TIYGWGHNHRGQLG--GIEGAKVKVPT--PTE-----ALATLRPVQLIGGEQTLFAVTAD 3808
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDG 137
G L+ G G+LG G E P ++ +Q F++ ++ G HC A +E
Sbjct: 3809 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSE------ 3862
Query: 138 TISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
++ WG+ + PR+ + ++ G H ++ G
Sbjct: 3863 ----GEVYSWGEAEDGKLGHGNRSPCDRPRVIES--LRGVEVVDIAAGGAHSACITASGE 3916
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSE 245
L WG YG+LG G + + L+ P+++ +A + ++ V+C G+ + +++
Sbjct: 3917 LFTWGKGRYGRLGHGDSEDQLK-PKLV--------DALQGHRVIDVACGSGDAQTLCLTD 3967
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+ V++WG G G+LG D P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 3968 DDMVWSWGDGDYGKLGR---GGSDGCKTPMKIDSLTGLGVIKVECGSQFSVALTKSGAVY 4024
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHT 357
WG +LG G SD + R P VQ +A G H
Sbjct: 4025 TWGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHC 4066
Query: 358 LVYMRDGRI-----------------HGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVR 399
+ DGRI + WG N GQ + + P V G ++
Sbjct: 4067 VCCTEDGRIKVFQWGLPRWSLGLGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKIN 4126
Query: 400 KLAAGGGHS 408
++A G H+
Sbjct: 4127 RVACGSAHT 4135
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 138/329 (41%), Gaps = 70/329 (21%)
Query: 63 RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG 122
R + + G +H A++S+G +++WG E G+LG G P ++ L+ V I+ G
Sbjct: 3845 RKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAG 3904
Query: 123 AHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQ 171
+A I ++ L+ WG+ + + RL G P + +
Sbjct: 3905 GAHSACIT---------ASGELFTWGKGR---YGRLGHGDSEDQLKPKLVDALQGHRVID 3952
Query: 172 VSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK 229
V+CGS + L++ ++ +WG +YG+LGRG +G + P I
Sbjct: 3953 VACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG-GSDGCKTPMKIDSLTGL--------G 4003
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ +V CG S A++++G VYTWG G +LGH S D PR+V L G + +A
Sbjct: 4004 VIKVECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIA 4060
Query: 290 CGGVHSCALTSKGAL-----------------YAWGGSQAGQLGLGPQTRSFSLIPNESD 332
G +H T G + Y WG + GQLG G
Sbjct: 4061 TGSLHCVCCTEDGRIKVFQWGLPRWSLGLGEVYTWGDNDEGQLGDG-------------T 4107
Query: 333 TYFRNIPILVVP---NGVQLVACGHSHTL 358
T P LV + VACG +HTL
Sbjct: 4108 TNAIQRPRLVAALQGKKINRVACGSAHTL 4136
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 136/289 (47%), Gaps = 37/289 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G G L P + G AG + + IACG ++AA+ DG
Sbjct: 479 VFSWGCGDGGRLGH-GDTTYLEEPTMIA-AFNGKQAGKHV--VHIACGSTYSAAITVDGE 534
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG G+ E + P V L+ V ++CG+ +A
Sbjct: 535 LYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLA-------VTENG 587
Query: 143 RLWVWGQ----------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
++W WG + G P+L + I +V CGS VAL++ G + WG
Sbjct: 588 QVWSWGDGDYGKLGRGGSDGCKTPKLV--EKLQDLDIVKVCCGSQFSVALTKDGQVYTWG 645
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
+ +LG G T E ++ P+++ + + +K+ V+ G H A++++GEV++W
Sbjct: 646 KGDNQRLGHG-TDEHVRFPKLL--------DTLQGKKVVDVAVGSTHCLALTDDGEVHSW 696
Query: 253 GLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
GS +L H +L S K+ P+ + L+ I ++CG S A +S
Sbjct: 697 --GSNDKLQHFDTLFSNKKQ--PKALPGLNSKHIVGISCGPGQSFAWSS 741
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 138/340 (40%), Gaps = 30/340 (8%)
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEP 132
T + GT++ WG N GQLG K P + L + V+ I A A+
Sbjct: 3750 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADG 3809
Query: 133 RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
+ G + + P L V+ G H +ALS G + +WG
Sbjct: 3810 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWG 3869
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
E G+LG G PRVI+ ++ ++ G HSA ++ +GE++TW
Sbjct: 3870 EAEDGKLGHG-NRSPCDRPRVIESLRGV--------EVVDIAAGGAHSACITASGELFTW 3920
Query: 253 GLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWG 308
G G G+LGH GD E L P+ V AL G + DVACG + LT +++WG
Sbjct: 3921 GKGRYGRLGH-----GDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWG 3975
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHG 368
G+LG G + + +S T GV V CG ++ + G ++
Sbjct: 3976 DGDYGKLGRGGSDGCKTPMKIDSLTGL----------GVIKVECGSQFSVALTKSGAVYT 4025
Query: 369 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGH 407
WG Y + + + P V G +V +A G H
Sbjct: 4026 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4065
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 110/247 (44%), Gaps = 23/247 (9%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
Q+ G + A++ G L A GY G+LG G T E + P +++ + K+
Sbjct: 3794 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGT-ESVSTPTLLESIQHVF-----IRKV 3847
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
V+ G H A+S GEVY+WG G+LGH + D+ PR + +L G+ + D+A
Sbjct: 3848 A-VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGVEVVDIAA 3903
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
GG HS +T+ G L+ WG + G+LG G + D + + + V V
Sbjct: 3904 GGAHSACITASGELFTWGKGRYGRLGHG----------DSEDQLKPKLVDALQGHRVIDV 3953
Query: 351 AC--GHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGH 407
AC G + TL D + WG YG+ S P +D G V K+ G
Sbjct: 3954 ACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKTPMKIDSLTGLGVIKVECGSQF 4013
Query: 408 SAVLADA 414
S L +
Sbjct: 4014 SVALTKS 4020
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 77/192 (40%), Gaps = 34/192 (17%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+TQ+ C E +S +G VYT S L P + +L + +A
Sbjct: 416 VTQIVCSEKGFLILSSSGAVYTQNYKST-------------TLAPMLIHSLSSRKMVKLA 462
Query: 290 C--GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
G H AL+S G +++WG G+LG G TY ++ NG
Sbjct: 463 AHPDGQHYLALSSNGEVFSWGCGDGGRLGHG------------DTTYLEEPTMIAAFNGK 510
Query: 348 QL------VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRK 400
Q +ACG +++ DG ++ WG +YG+ + S P V G +V
Sbjct: 511 QAGKHVVHIACGSTYSAAITVDGELYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVD 570
Query: 401 LAAGGGHSAVLA 412
+A G G + LA
Sbjct: 571 VACGSGDAQTLA 582
>gi|297274438|ref|XP_001101212.2| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
[Macaca mulatta]
Length = 519
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 113/227 (49%), Gaps = 22/227 (9%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H+V + G + WG+N Y QLG G T GL ++ + +++ +V+CG
Sbjct: 110 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSN--------KQVIEVACGS 161
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHSC 296
YHS ++ +GEV+ WG + GQ+G S + + +PRRV L + +ACG +
Sbjct: 162 YHSLVLTSDGEVFAWGYNNSGQVGSGSTVN---QPIPRRVTGCLQNKVVVTIACGQMCCM 218
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G +Y WG + GQLGLG + + R VQ VACG++H
Sbjct: 219 AVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR----------VQRVACGYAH 268
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 403
TLV +G+++ WG NSYGQ + YP+PV + ++AA
Sbjct: 269 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA 315
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 135/303 (44%), Gaps = 49/303 (16%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTAAIAEPRENDGTIS 140
+F G N G LG G + P ++ L + + S+S G+ H A E
Sbjct: 67 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTE--------- 117
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVS------------CGSVHVVALSECGLL 188
++ WG N + +L G + CQ+S CGS H + L+ G +
Sbjct: 118 -GEVFTWGHNA---YSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEV 173
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
AWGYN GQ+G G T PR + G + + + ++CG+ AV + GE
Sbjct: 174 FAWGYNNSGQVGSGSTVNQ-PIPRRVTG-------CLQNKVVVTIACGQMCCMAVVDTGE 225
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
VY WG GQLG L S + P RV AL GI ++ VACG H+ LT +G +YAWG
Sbjct: 226 VYVWGYNGNGQLG---LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRIH 367
+ GQLG G N+S+ + + +++ AC +HT + G ++
Sbjct: 283 ANSYGQLGTG----------NKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVY 332
Query: 368 GWG 370
WG
Sbjct: 333 MWG 335
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 114/243 (46%), Gaps = 39/243 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G +P Q+ L +N + +++ACG H+ + SDG
Sbjct: 120 VFTWGHNAYSQLGN-GTTNHGLVPCQISTNL------SNKQVIEVACGSYHSLVLTSDGE 172
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P +V LQ++ V +I+CG C A+ + T
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAV---------VDT 223
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N N P A + +V+CG H + L++ G + AWG
Sbjct: 224 GEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 283
Query: 194 NEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G + + P + E ++I ++ +C H SAA ++ G VY
Sbjct: 284 NSYGQLGTGNKSNQSYPTPVTV-----------EKDRIIEIAACHSTHTSAAKTQGGHVY 332
Query: 251 TWG 253
WG
Sbjct: 333 MWG 335
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 72/151 (47%), Gaps = 13/151 (8%)
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG-GVHSCALTSKGAL 304
N E++ G G LG +QS + PRR+ +L G I ++ G G H T++G +
Sbjct: 64 NDEIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEV 120
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 364
+ WG + QLG G T + L+P + T N ++ V ACG H+LV DG
Sbjct: 121 FTWGHNAYSQLGNG--TTNHGLVPCQISTNLSNKQVIEV-------ACGSYHSLVLTSDG 171
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 395
+ WGYN+ GQ + + P V C+
Sbjct: 172 EVFAWGYNNSGQVGSGSTVNQPIPRRVTGCL 202
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 18/150 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G Q P A R +ACG+ HT + +G
Sbjct: 226 VYVWGYNGNGQLGLGSSGNQ--------PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 277
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WGAN +GQLG G + + +P V + ++ +C + T+A
Sbjct: 278 VYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSA--------AKTQGG 329
Query: 143 RLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 330 HVYMWGQCRGQSVILPHLTHFSCTDDVFAC 359
>gi|403355850|gb|EJY77515.1| RCC1 and BTB domain-containing protein, putative [Oxytricha
trifallax]
Length = 546
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 130/482 (26%), Positives = 210/482 (43%), Gaps = 93/482 (19%)
Query: 23 IYVWGYNHSGQTGRKG-------------RERQLRIPKQLPPELFGCPAGANSRWLDIAC 69
+Y GYN G + +G R QL++ ++L G N + +
Sbjct: 22 VYSGGYNEMGNSLSQGPNAMSQNNNNNNTRTGQLKLVEKLR--------GKNIVKIFASN 73
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAA 128
G EH A+ ++G +F++G N GQLG G + P++V+ L +FV ++ C H +
Sbjct: 74 GCEHVIALTNNGKVFSFGFNVKGQLGHGDQTSINSPKQVEALSRKFVTAVGCSYYHTIFS 133
Query: 129 IAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAF----TPNTI-------ICQVSCGSV 177
A+ E ++ G+N ++ +L G +P I I + CG
Sbjct: 134 CADEME---------IYSCGRN---DYGQLGLGNLDDKNSPTLIEALNGKRIVSIGCGQY 181
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H V S G + ++G N+ GQLG + + P+ +K K TQ++CG
Sbjct: 182 HSVVSSIDGEIFSFGRNDSGQLGITGSDGNISLPKEVKNL-----------KSTQIACGY 230
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
YH+ A++ NG++Y+WG GQLG + S KE+LP V L+ I VACG H+ A
Sbjct: 231 YHTVAIN-NGQLYSWGKNDSGQLG-IGIYSA-KEILPTLVRDLEDQEIVSVACGCYHTLA 287
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV---VPNGVQLVACGH 354
L G L+++G + GQLG G S P+L+ + V +A G
Sbjct: 288 LGYAGQLFSFGRNSHGQLGDGTTNNSCK-------------PLLIQGLIDKKVCQIAAGF 334
Query: 355 SHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADA 414
H++V + + I + Q N + S V + V E +KL A H +L
Sbjct: 335 YHSIV-LANPVIRNPLVEDFKQLLNNQEL-----SDVTFIV-EGKKLYA---HRCILMAR 384
Query: 415 CS-LKELCEFRLAESVTLSNASEIEDVASRTGSEALARLCERLREHSLHG-DEFDCDDDT 472
C L+ + + E+ L +IED T + L E L + ++F+ D T
Sbjct: 385 CEPLERMVNGHMREAFDLQ--IQIED----TSYQCFYSLLEYLYTEQVEALNQFETDIMT 438
Query: 473 RN 474
+N
Sbjct: 439 KN 440
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 108/235 (45%), Gaps = 62/235 (26%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYG-------------------QLGRGITCEGLQ 209
+ QV+ G+ H + L++CG + + GYNE G + G+ E L+
Sbjct: 3 VIQVAAGNEHTLILTDCGDVYSGGYNEMGNSLSQGPNAMSQNNNNNNTRTGQLKLVEKLR 62
Query: 210 GPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGD 269
G ++K +A S G H A++ NG+V+++G GQLGH GD
Sbjct: 63 GKNIVKIFA---------------SNGCEHVIALTNNGKVFSFGFNVKGQLGH-----GD 102
Query: 270 KELL--PRRVVALDGIFIKDVACGGVH---SCALTSKGALYAWGGSQAGQLGLGPQTRSF 324
+ + P++V AL F+ V C H SCA + +Y+ G + GQLGLG
Sbjct: 103 QTSINSPKQVEALSRKFVTAVGCSYYHTIFSCA--DEMEIYSCGRNDYGQLGLG------ 154
Query: 325 SLIPNESDTYFRNIPILV-VPNGVQLVA--CGHSHTLVYMRDGRIHGWGYNSYGQ 376
N D +N P L+ NG ++V+ CG H++V DG I +G N GQ
Sbjct: 155 ----NLDD---KNSPTLIEALNGKRIVSIGCGQYHSVVSSIDGEIFSFGRNDSGQ 202
>gi|348688462|gb|EGZ28276.1| hypothetical protein PHYSODRAFT_476799 [Phytophthora sojae]
Length = 1699
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 140/306 (45%), Gaps = 36/306 (11%)
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
+ G L++ G N +G+LG G + R V + ++ + G A + N+G
Sbjct: 326 ASGELYSCGQNSYGELGTGDDIERHQLTSVSLCGWDDIRQVVSGNETLAVLT----NEGV 381
Query: 139 ISTSRLWVWGQNQGSNFP------RLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
+ T L GQ +F R + S G H++AL++ GL +WG
Sbjct: 382 VLTCGLNKSGQCGQGHFDERVMMLRPVQALRSQRVKFIAASNGCEHMIALTDTGLAYSWG 441
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
YN+ GQLG + P++I E+ + +K+ S +HSA +++ GE+YT+
Sbjct: 442 YNDRGQLGHENLATKIHVPKLI--------ESLKDKKLGFASVSYHHSAVITDAGELYTF 493
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G+ GQLG L + P+ V +L+ + VACG H+ T+ G L+ G +
Sbjct: 494 GMNDCGQLG---LDHTQHQSTPQLVKSLEATEVSMVACGLYHTIICTAAGELFTCGKNDY 550
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPN-GVQLVACGHSHTLVYMRDGRIHGWG 370
GQLGL R L P LV +PN V VACG+ H++V GR +G
Sbjct: 551 GQLGLA-HNRQIKL------------PTLVALPNEMVSFVACGYYHSVVVSTGGRAFSFG 597
Query: 371 YNSYGQ 376
N YGQ
Sbjct: 598 RNDYGQ 603
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 153/344 (44%), Gaps = 49/344 (14%)
Query: 64 WLDI---ACGHEHTAAVASDGTLFTWGANEFGQLGDG-TEEGRKHPEKVKQLQSEFVKSI 119
W DI G+E A + ++G + T G N+ GQ G G +E V+ L+S+ VK I
Sbjct: 360 WDDIRQVVSGNETLAVLTNEGVVLTCGLNKSGQCGQGHFDERVMMLRPVQALRSQRVKFI 419
Query: 120 SCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNF--PRLFWGAFTPNTI-------IC 170
+ C IA T + WG N L P I +
Sbjct: 420 AASNGCEHMIA-------LTDTGLAYSWGYNDRGQLGHENLATKIHVPKLIESLKDKKLG 472
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
S H +++ G L +G N+ GQLG T + P+++K E ++
Sbjct: 473 FASVSYHHSAVITDAGELYTFGMNDCGQLGLDHT-QHQSTPQLVKSL--------EATEV 523
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
+ V+CG YH+ + GE++T G GQLG + ++++ +VAL + VAC
Sbjct: 524 SMVACGLYHTIICTAAGELFTCGKNDYGQLG----LAHNRQIKLPTLVALPNEMVSFVAC 579
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIP-ILVVPNGVQL 349
G HS +++ G +++G + GQLG+G + +N+P ++ + + ++
Sbjct: 580 GYYHSVVVSTGGRAFSFGRNDYGQLGIGSKVH-------------QNVPNVVALSSNTRM 626
Query: 350 V--ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
V CG HT++ G+++ +G N+ GQ N S A P P+
Sbjct: 627 VRATCGCYHTVLLSEQGQVYVFGRNNKGQLGNRGSADALLPVPL 670
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 116/249 (46%), Gaps = 38/249 (15%)
Query: 24 YVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIA-CGHEHTAAVASDGT 82
Y WGYN GQ G + ++ +PK + + L A + H+A + G
Sbjct: 438 YSWGYNDRGQLGHENLATKIHVPKLI--------ESLKDKKLGFASVSYHHSAVITDAGE 489
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH----CTAAIAEPRENDGT 138
L+T+G N+ GQLG + + P+ VK L++ V ++CG + CTAA G
Sbjct: 490 LYTFGMNDCGQLGLDHTQHQSTPQLVKSLEATEVSMVACGLYHTIICTAA--------GE 541
Query: 139 ISTSRLWVWGQ-----NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
+ T +GQ N+ P L PN ++ V+CG H V +S G ++G
Sbjct: 542 LFTCGKNDYGQLGLAHNRQIKLPTL---VALPNEMVSFVACGYYHSVVVSTGGRAFSFGR 598
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
N+YGQLG G P V+ + ++ + +CG YH+ +SE G+VY +G
Sbjct: 599 NDYGQLGIGSKVHQ-NVPNVVALSSN--------TRMVRATCGCYHTVLLSEQGQVYVFG 649
Query: 254 LGSVGQLGH 262
+ GQLG+
Sbjct: 650 RNNKGQLGN 658
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 22/134 (16%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPK--QLPPELFGCPAGANSRWLDIACGHEHTAA 76
A ++ G N GQ G RQ+++P LP E+ +ACG+ H+
Sbjct: 538 AAGELFTCGKNDYGQLGL-AHNRQIKLPTLVALPNEMVSF----------VACGYYHSVV 586
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V++ G F++G N++GQLG G++ + P V + + +CG + T ++E
Sbjct: 587 VSTGGRAFSFGRNDYGQLGIGSKVHQNVPNVVALSSNTRMVRATCGCYHTVLLSE----- 641
Query: 137 GTISTSRLWVWGQN 150
+++V+G+N
Sbjct: 642 ----QGQVYVFGRN 651
>gi|402874534|ref|XP_003901090.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
anubis]
Length = 3314
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 173/382 (45%), Gaps = 79/382 (20%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI--- 139
++ WGA GQL E GR + + CG +CT I + +GT+
Sbjct: 2452 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVI----QANGTVLAC 2504
Query: 140 ---STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQV--SCGSV-HVVALSECGLLQAWGY 193
S RL GQ + L + ++ Q+ SCGS H +AL+E G + +WG
Sbjct: 2505 GEGSYGRL---GQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 2561
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
+YG+LG G + + PR I EA + E++ Q+SCG HSA V+ +G+++T+G
Sbjct: 2562 GDYGKLGHG-NSDRQRRPRQI--------EALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 2612
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL-YAWGGSQA 312
G G+LG L + + LP RV AL+G I VACG H+ A+++ G++ +A+G
Sbjct: 2613 NGDYGRLG---LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 2669
Query: 313 GQLGLGPQTRSFSLIPNESDTY--------------------------FRNIPILVVPNG 346
G+LGLG T S P + D F ++ +P G
Sbjct: 2670 GKLGLGNSTAKSS--PQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 2727
Query: 347 ------------------VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYP 388
++ VA G HTL +G ++ WG NS GQ + + P
Sbjct: 2728 RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP 2787
Query: 389 SPVDWCVGE-VRKLAAGGGHSA 409
+ V G+ VR+++AG HSA
Sbjct: 2788 TLVTGLQGKNVRQISAGRCHSA 2809
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 164/377 (43%), Gaps = 85/377 (22%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPP-------- 51
MD + T+RP D ++ K +Y+WG GQ GR + +P P
Sbjct: 2429 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMVPAAAPSFSQAQQVI 2486
Query: 52 -------------ELFGCPAGANSRW------------------------LDIACGHE-H 73
+ C G+ R L +CG + H
Sbjct: 2487 CGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGH 2546
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
+ A+ G +F+WG ++G+LG G + ++ P +++ LQ E V +SCG +A +
Sbjct: 2547 SMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT--- 2603
Query: 134 ENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-----------ICQVSCGSVHVVAL 182
S +L+ +G ++ RL G + + I QV+CG H +A+
Sbjct: 2604 ------SDGKLFTFGNG---DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV 2654
Query: 183 SECG-LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
S G ++ A+G +YG+LG G P+ I I +V+CG S
Sbjct: 2655 SADGSMVWAFGDGDYGKLGLG-NSTAKSSPQKIDVLCGI--------GIKKVACGTQFSV 2705
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A++++G VYT+G + L ++ ++ P+++ L G+ I+DVA G H+ AL S
Sbjct: 2706 ALTKDGHVYTFGQDRLIGLPEGRARNHNR---PQQIPVLAGMIIEDVAVGAEHTLALASN 2762
Query: 302 GALYAWGGSQAGQLGLG 318
G +YAWG + GQLGLG
Sbjct: 2763 GDVYAWGSNSEGQLGLG 2779
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 143/307 (46%), Gaps = 43/307 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V SDG
Sbjct: 2556 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTSDGK 2607
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG++
Sbjct: 2608 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA----DGSM--- 2660
Query: 143 RLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T P I I +V+CG+ VAL++ G + +
Sbjct: 2661 -VWAFGDG---DYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTF 2716
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ I A + I V+ G H+ A++ NG+VY
Sbjct: 2717 GQDRLIGLPEG-RARNHNRPQQIPVLAGMI--------IEDVAVGAEHTLALASNGDVYA 2767
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWGGS 310
WG S GQLG L + P V L G ++ ++ G HS A T+ A G S
Sbjct: 2768 WGSNSEGQLG---LGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVS 2824
Query: 311 QAGQLGL 317
QLGL
Sbjct: 2825 VPLQLGL 2831
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 30/228 (13%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +GQL G V+ A AP + QV CG+ + + NG V
Sbjct: 2455 WGAGRHGQLAEA-------GRNVMVPAA-----APSFSQAQQVICGQNCTFVIQANGTVL 2502
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGALYAW 307
G GS G+LG + S D +L + AL G + + +CG HS ALT G +++W
Sbjct: 2503 ACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSW 2559
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G R R I L VQ+ +CG H+ V DG++
Sbjct: 2560 GDGDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLF 2609
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
+G YG+ ++ P V G ++ ++A G H+ AV AD
Sbjct: 2610 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 2657
>gi|330836206|ref|YP_004410847.1| chromosome condensation regulator RCC1 [Sphaerochaeta coccoides DSM
17374]
gi|329748109|gb|AEC01465.1| regulator of chromosome condensation RCC1 [Sphaerochaeta coccoides
DSM 17374]
Length = 374
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 170/382 (44%), Gaps = 73/382 (19%)
Query: 53 LFGCPA--GANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQ 110
L CP +++ I+ G HT + +DGTL+ G N +GQLGDGT+E + P +V
Sbjct: 22 LTACPGEPKPSAKVTAISAGLYHTMILKNDGTLWATGDNWYGQLGDGTDEDKYTPVRVM- 80
Query: 111 LQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAF------T 164
V ++S G T + +NDGT LW G+N F +L GA T
Sbjct: 81 ---TDVAAVSAGNSHTMIL----KNDGT-----LWATGKNF---FGQLGDGATDQADKNT 125
Query: 165 PNTI---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFL 221
P I + VS G+ H + + + G L GYN GQLG G + ++
Sbjct: 126 PVQIMTDVASVSAGNEHTMIVKKDGTLWGTGYNTPGQLGDGTWINKVTPEQI-------- 177
Query: 222 DEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD 281
+ + VS G H+ + ++G ++ G + GQLG + S D P +++
Sbjct: 178 -----MTDVASVSAGYAHTMILKKDGTLWATGRNNDGQLGDGTWSSKDT---PEQIMT-- 227
Query: 282 GIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPIL 341
+ V G H+ + L+A G + AGQLG G T +N P+
Sbjct: 228 --DVAAVFAGYAHTMIVKKDDTLWATGQNNAGQLGDGSMTS-------------KNTPVQ 272
Query: 342 VVPNG--VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA----NEKSTYAWYPSPVDWCV 395
V G V V+ G +HT++ +DG + GYN YGQ +KST PV +
Sbjct: 273 VSSMGSDVATVSVGDNHTMILKKDGTLLATGYNYYGQLGIGNNEDKST------PVQ-VM 325
Query: 396 GEVRKLAAGGGHSAVLADACSL 417
+V ++AGG H+ +L +L
Sbjct: 326 TDVASVSAGGSHTMILKKDGTL 347
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 140/317 (44%), Gaps = 46/317 (14%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++ G+ HT + +DGTL+ G N FGQLGDG + V+ + V S+S G T
Sbjct: 86 VSAGNSHTMILKNDGTLWATGKNFFGQLGDGATDQADKNTPVQIMTD--VASVSAGNEHT 143
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFW-GAFTPNTI---ICQVSCGSVHVVAL 182
+ + DGT LW G N W TP I + VS G H + L
Sbjct: 144 MIV----KKDGT-----LWGTGYNTPGQLGDGTWINKVTPEQIMTDVASVSAGYAHTMIL 194
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
+ G L A G N GQLG G T P I + + V G H+
Sbjct: 195 KKDGTLWATGRNNDGQLGDG-TWSSKDTPEQI------------MTDVAAVFAGYAHTMI 241
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
V ++ ++ G + GQLG S+ S + P +V ++ G + V+ G H+ L G
Sbjct: 242 VKKDDTLWATGQNNAGQLGDGSMTSKNT---PVQVSSM-GSDVATVSVGDNHTMILKKDG 297
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
L A G + GQLG+G N D ++ P+ V+ + V V+ G SHT++ +
Sbjct: 298 TLLATGYNYYGQLGIG----------NNED---KSTPVQVMTD-VASVSAGGSHTMILKK 343
Query: 363 DGRIHGWGYNSYGQAAN 379
DG + G GYN GQ N
Sbjct: 344 DGTLWGTGYNIEGQLGN 360
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 113/256 (44%), Gaps = 34/256 (13%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++ G+EHT V DGTL+ G N GQLGDGT + PE Q+ ++ V S+S G T
Sbjct: 136 VSAGNEHTMIVKKDGTLWGTGYNTPGQLGDGTWINKVTPE---QIMTD-VASVSAGYAHT 191
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAF-TPNTIICQVSC---GSVHVVAL 182
+ + DGT LW G+N W + TP I+ V+ G H + +
Sbjct: 192 MIL----KKDGT-----LWATGRNNDGQLGDGTWSSKDTPEQIMTDVAAVFAGYAHTMIV 242
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
+ L A G N GQLG G + P + + VS G+ H+
Sbjct: 243 KKDDTLWATGQNNAGQLGDG-SMTSKNTPVQVSSMG---------SDVATVSVGDNHTMI 292
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
+ ++G + G GQLG + + + + P +V+ + V+ GG H+ L G
Sbjct: 293 LKKDGTLLATGYNYYGQLG---IGNNEDKSTPVQVMT----DVASVSAGGSHTMILKKDG 345
Query: 303 ALYAWGGSQAGQLGLG 318
L+ G + GQLG G
Sbjct: 346 TLWGTGYNIEGQLGNG 361
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 81/186 (43%), Gaps = 28/186 (15%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++ G N+ GQ G G P+Q+ ++ + G+ HT V D
Sbjct: 199 TLWATGRNNDGQLG-DGTWSSKDTPEQIMTDVAA-----------VFAGYAHTMIVKKDD 246
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
TL+ G N GQLGDG+ + P +V + S+ V ++S G + T + + DGT+
Sbjct: 247 TLWATGQNNAGQLGDGSMTSKNTPVQVSSMGSD-VATVSVGDNHTMIL----KKDGTLLA 301
Query: 142 SRLWVWGQ-----NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
+ +GQ N+ + P T + VS G H + L + G L GYN
Sbjct: 302 TGYNYYGQLGIGNNEDKSTPVQVM------TDVASVSAGGSHTMILKKDGTLWGTGYNIE 355
Query: 197 GQLGRG 202
GQLG G
Sbjct: 356 GQLGNG 361
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 12/82 (14%)
Query: 27 GYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTW 86
GYN+ GQ G E + P Q+ ++ AG + HT + DGTL+
Sbjct: 303 GYNYYGQLGIGNNEDK-STPVQVMTDVASVSAGGS-----------HTMILKKDGTLWGT 350
Query: 87 GANEFGQLGDGTEEGRKHPEKV 108
G N GQLG+GT + P K+
Sbjct: 351 GYNIEGQLGNGTPDDTSTPVKI 372
>gi|224099911|ref|XP_002311672.1| predicted protein [Populus trichocarpa]
gi|222851492|gb|EEE89039.1| predicted protein [Populus trichocarpa]
Length = 1109
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 97/303 (32%), Positives = 142/303 (46%), Gaps = 48/303 (15%)
Query: 23 IYVWG--YNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
++ WG N+SG G G + IPK++ L G + L IACG H+A S+
Sbjct: 338 LFTWGDGSNNSGLLGH-GTDVSHWIPKRVSGPLEGL------QVLSIACGTWHSALATSN 390
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT-I 139
G LFT+G FG LG G + P++++ L ++CG TAAI E G+ I
Sbjct: 391 GKLFTFGDGTFGALGHGDRKSVSSPKELQSLNGLKTIKVACGVWHTAAIVEVMSQSGSNI 450
Query: 140 STSRLWVWGQNQGSNFPRLFWGAFTPNTIIC--------QVSCGSVHVVALSECGLLQAW 191
S+ +L+ WG A+ T + Q++CG VAL+ G +
Sbjct: 451 SSRKLFTWGDGDKHRLGHGNKDAYLLPTCVSSLIDYNFQQLACGHTMTVALTTSGHVFTM 510
Query: 192 GYNEYGQLGR-----GITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
G + YGQLG I C L R++ +F++E +SCG YH+A ++
Sbjct: 511 GGSAYGQLGNPSSNGKIPC--LVQDRLV---GEFVEE---------ISCGAYHTAVLTSR 556
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
EV+TWG G+ GQLGH GD E LP V AL +K+++CG TS +
Sbjct: 557 SEVFTWGRGANGQLGH-----GDTEDRKLPTLVEALKERHVKNLSCGA----NFTSSICI 607
Query: 305 YAW 307
+ W
Sbjct: 608 HKW 610
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 146/338 (43%), Gaps = 66/338 (19%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
I+CG H A V G +FTWG G+LG G E+ HP+ V+ L + ++CG + T
Sbjct: 270 ISCGVRHVALVTRQGEVFTWGEESGGRLGHGIEDHFTHPKLVESLAVTNIDYVACGEYHT 329
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSN--------------FPRLFWGAFTPNTIICQV 172
AI+ ++ L+ WG GSN P+ G + +
Sbjct: 330 CAIS---------TSGDLFTWG--DGSNNSGLLGHGTDVSHWIPKRVSGPLE-GLQVLSI 377
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
+CG+ H + G L +G +G LG G + + P+ ++ K +
Sbjct: 378 ACGTWHSALATSNGKLFTFGDGTFGALGHG-DRKSVSSPKELQSLNGL--------KTIK 428
Query: 233 VSCGEYHSAAVSE----------NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG 282
V+CG +H+AA+ E + +++TWG G +LGH + D LLP V +L
Sbjct: 429 VACGVWHTAAIVEVMSQSGSNISSRKLFTWGDGDKHRLGHG---NKDAYLLPTCVSSLID 485
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
+ +ACG + ALT+ G ++ GGS GQLG P + IP LV
Sbjct: 486 YNFQQLACGHTMTVALTTSGHVFTMGGSAYGQLG-NPSSNG-------------KIPCLV 531
Query: 343 ----VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
V V+ ++CG HT V + WG + GQ
Sbjct: 532 QDRLVGEFVEEISCGAYHTAVLTSRSEVFTWGRGANGQ 569
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 136/325 (41%), Gaps = 65/325 (20%)
Query: 116 VKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTP 165
V ISCG A + E ++ WG+ G P+L
Sbjct: 267 VHQISCGVRHVALVTRQGE---------VFTWGEESGGRLGHGIEDHFTHPKLVESLAVT 317
Query: 166 NTIICQVSCGSVHVVALSECGLLQAWG--YNEYGQLGRGITCEGLQGPRVIKGYAKFLDE 223
N I V+CG H A+S G L WG N G LG G P+ + G + L
Sbjct: 318 N--IDYVACGEYHTCAISTSGDLFTWGDGSNNSGLLGHGTDVSHWI-PKRVSGPLEGL-- 372
Query: 224 APELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALD 281
++ ++CG +HSA + NG+++T+G G+ G LGH GD++ + P+ + +L+
Sbjct: 373 -----QVLSIACGTWHSALATSNGKLFTFGDGTFGALGH-----GDRKSVSSPKELQSLN 422
Query: 282 GIFIKDVACGGVHSCALT----------SKGALYAWGGSQAGQLGLGPQTRSFSLIPNES 331
G+ VACG H+ A+ S L+ WG +LG G
Sbjct: 423 GLKTIKVACGVWHTAAIVEVMSQSGSNISSRKLFTWGDGDKHRLGHG-----------NK 471
Query: 332 DTYFRNIPILV---VPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYP 388
D Y +P V + Q +ACGH+ T+ G + G ++YGQ N S
Sbjct: 472 DAYL--LPTCVSSLIDYNFQQLACGHTMTVALTTSGHVFTMGGSAYGQLGNPSSNGKIPC 529
Query: 389 SPVDWCVGE-VRKLAAGGGHSAVLA 412
D VGE V +++ G H+AVL
Sbjct: 530 LVQDRLVGEFVEEISCGAYHTAVLT 554
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 159/379 (41%), Gaps = 62/379 (16%)
Query: 11 ARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACG 70
R V + + ++ WG G+ G G E PK L A N + +ACG
Sbjct: 274 VRHVALVTRQGEVFTWGEESGGRLGH-GIEDHFTHPK-----LVESLAVTNIDY--VACG 325
Query: 71 HEHTAAVASDGTLFTWG--ANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGA-HCT 126
HT A+++ G LFTWG +N G LG GT+ P++V L+ V SI+CG H
Sbjct: 326 EYHTCAISTSGDLFTWGDGSNNSGLLGHGTDVSHWIPKRVSGPLEGLQVLSIACGTWHSA 385
Query: 127 AAIAEPRE---NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALS 183
A + + DGT G + + P+ TI +V+CG H A+
Sbjct: 386 LATSNGKLFTFGDGTFGA---LGHGDRKSVSSPKELQSLNGLKTI--KVACGVWHTAAIV 440
Query: 184 EC----------GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
E L WG + +LG G + P + + Q+
Sbjct: 441 EVMSQSGSNISSRKLFTWGDGDKHRLGHG-NKDAYLLPTCVSSLIDY--------NFQQL 491
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
+CG + A++ +G V+T G + GQLG+ S L+ R+V G F+++++CG
Sbjct: 492 ACGHTMTVALTTSGHVFTMGGSAYGQLGNPSSNGKIPCLVQDRLV---GEFVEEISCGAY 548
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV---VPNGVQLV 350
H+ LTS+ ++ WG GQLG G DT R +P LV V+ +
Sbjct: 549 HTAVLTSRSEVFTWGRGANGQLGHG-------------DTEDRKLPTLVEALKERHVKNL 595
Query: 351 ACGHSHTLVYMRDGRIHGW 369
+CG + T IH W
Sbjct: 596 SCGANFTSSIC----IHKW 610
>gi|110638698|ref|YP_678907.1| alpha-tubulin suppressor [Cytophaga hutchinsonii ATCC 33406]
gi|110281379|gb|ABG59565.1| alpha-tubulin suppressor [Cytophaga hutchinsonii ATCC 33406]
Length = 461
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 162/381 (42%), Gaps = 67/381 (17%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++ WG N+ GQ G G +P Q+ G + W I+ H + A+ +DG
Sbjct: 42 TLWGWGLNNQGQLGN-GTLVNKTVPTQI---------GTATNWSQISAAHNFSTALKNDG 91
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
T++ WG N FGQL DGT + P ++ + +S+S G + AA+A S
Sbjct: 92 TIWAWGDNTFGQLADGTTTNKTAPIQIGTATNW--QSVSAGYNHIAALA---------SD 140
Query: 142 SRLWVWGQN------QGSNFPRLFWGAFTPNTIICQ----VSCGSVHVVALSECGLLQAW 191
+ +W+WG N G+N + +P I + GS + +AL G L W
Sbjct: 141 ATIWLWGNNYSGQLGDGTNTDKK-----SPLQIGTNEWKAIHAGSGYTIALKTDGTLWTW 195
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G N G LG G + R G + A + +KI A+ + ++
Sbjct: 196 GNNTSGNLGNGTLAD-----RNTPGK---IGTAADWQKIYSAPM------AMKADSLLWG 241
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG GQLG+ S + P ++ A K+V+ G H+ + G L+AWG ++
Sbjct: 242 WGYNGYGQLGNGLNGSLNNLKNPAQIGA---SHWKEVSPSGTHTLGIKGNGTLWAWGYNE 298
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQLVACGHSHTLVYMRDGRIHGWG 370
G+LG G QT R++P + + ++V + HT+ DG + WG
Sbjct: 299 NGKLGDGTQTD-------------RSLPTQIGTDSDWKMVNANYYHTMAIKTDGSLWAWG 345
Query: 371 YNSYGQAANEKSTYAWYPSPV 391
NS GQ + P+PV
Sbjct: 346 TNSNGQLGDGTKISKSSPTPV 366
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 103/253 (40%), Gaps = 44/253 (17%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + + I++WG N+SGQ G G + P Q+ + W I G +T A
Sbjct: 137 LASDATIWLWGNNYSGQLG-DGTNTDKKSPLQI----------GTNEWKAIHAGSGYTIA 185
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ +DGTL+TWG N G LG+GT R P K I A + P
Sbjct: 186 LKTDGTLWTWGNNTSGNLGNGTLADRNTPGK-----------IGTAADWQKIYSAPMAMK 234
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAF----TPNTIIC----QVSCGSVHVVALSECGLL 188
+ S LW WG N G+ P I +VS H + + G L
Sbjct: 235 ---ADSLLWGWGYNGYGQLGNGLNGSLNNLKNPAQIGASHWKEVSPSGTHTLGIKGNGTL 291
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
AWGYNE G+LG +G Q R + + V+ YH+ A+ +G
Sbjct: 292 WAWGYNENGKLG-----DGTQTDRSLP------TQIGTDSDWKMVNANYYHTMAIKTDGS 340
Query: 249 VYTWGLGSVGQLG 261
++ WG S GQLG
Sbjct: 341 LWAWGTNSNGQLG 353
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 12/121 (9%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I ++ WGYN +G+ G G + +P Q+ G +S W + + HT A
Sbjct: 285 IKGNGTLWAWGYNENGKLG-DGTQTDRSLPTQI---------GTDSDWKMVNANYYHTMA 334
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ +DG+L+ WG N GQLGDGT+ + P V S SI+ + TA P +
Sbjct: 335 IKTDGSLWAWGTNSNGQLGDGTKISKSSPTPVA--CSGIALSINTSLNETAIEVYPNPSQ 392
Query: 137 G 137
G
Sbjct: 393 G 393
>gi|355694501|gb|AER99690.1| hect domain and RLD 5 [Mustela putorius furo]
Length = 675
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 86/259 (33%), Positives = 131/259 (50%), Gaps = 43/259 (16%)
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAI 129
G EH ++SDG F + + +H LQ + + I+CG + + A+
Sbjct: 15 GAEHMLILSSDGKPFEYNYS------------IEHARFQCILQEKSIIQITCGDYHSLAL 62
Query: 130 AEPRENDGTISTSRLWVWGQNQGSNFP--RLFWGAFTPNTI-------ICQVSCGSVHVV 180
++ E L+ WGQN RLF TP + + Q+S G H +
Sbjct: 63 SKGGE---------LFAWGQNLHGQLGIGRLFASIPTPQLVEHLSGVPLVQISAGKAHSM 113
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
ALS G + +WG N+ GQLG G T +G + P ++ EA + +K+ ++CG H+
Sbjct: 114 ALSMSGNIYSWGRNDLGQLGLGHT-DGEEFPSLV--------EALDSQKVEFLACGGSHT 164
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
A ++E+G+V+T+G G GQLGH S Q+ EL PR V L GI + VACG H+ A S
Sbjct: 165 ALLTEDGQVFTFGAGKHGQLGHNSTQN---ELRPRLVTELTGIRVTQVACGRRHTLAYVS 221
Query: 301 K-GALYAWGGSQAGQLGLG 318
G ++++G + GQLG G
Sbjct: 222 DLGKVFSFGSGKEGQLGNG 240
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 97/197 (49%), Gaps = 15/197 (7%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+ I Q++CG+YHS A+S+ GE++ WG GQLG L + P+ V L G+ +
Sbjct: 47 KSIIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFASIPT--PQLVEHLSGVPLVQ 104
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
++ G HS AL+ G +Y+WG + GQLGLG + F ++ + V
Sbjct: 105 ISAGKAHSMALSMSGNIYSWGRNDLGQLGLG----------HTDGEEFPSLVEALDSQKV 154
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGG 406
+ +ACG SHT + DG++ +G +GQ + + P V G V ++A G
Sbjct: 155 EFLACGGSHTALLTEDGQVFTFGAGKHGQLGHNSTQNELRPRLVTELTGIRVTQVACGRR 214
Query: 407 HSAVLADACSLKELCEF 423
H+ LA L ++ F
Sbjct: 215 HT--LAYVSDLGKVFSF 229
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISCGA 123
+ I CG H+ A++ G LF WG N GQLG G P+ V+ L + IS G
Sbjct: 50 IQITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFASIPTPQLVEHLSGVPLVQISAGK 109
Query: 124 HCTAAIAEPRENDGTISTSRLWVWGQN----------QGSNFPRLFWGAFTPNTIICQVS 173
+ A++ + ++ WG+N G FP L + ++
Sbjct: 110 AHSMALS---------MSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKVEF--LA 158
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
CG H L+E G + +G ++GQLG T L+ PR++ ++TQV
Sbjct: 159 CGGSHTALLTEDGQVFTFGAGKHGQLGHNSTQNELR-PRLVTELTGI--------RVTQV 209
Query: 234 SCGEYHSAA-VSENGEVYTWGLGSVGQLGH 262
+CG H+ A VS+ G+V+++G G GQLG+
Sbjct: 210 ACGRRHTLAYVSDLGKVFSFGSGKEGQLGN 239
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 89/186 (47%), Gaps = 19/186 (10%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G + P QL L G P + I+ G H+ A++ G
Sbjct: 68 LFAWGQNLHGQLGIGRLFASIPTP-QLVEHLSGVPL------VQISAGKAHSMALSMSGN 120
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+++WG N+ GQLG G +G + P V+ L S+ V+ ++CG TA + E DG + T
Sbjct: 121 IYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKVEFLACGGSHTALLTE----DGQVFTF 176
Query: 143 RLWVWGQ-----NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYNEY 196
GQ Q PRL + QV+CG H +A +S+ G + ++G +
Sbjct: 177 GAGKHGQLGHNSTQNELRPRLV--TELTGIRVTQVACGRRHTLAYVSDLGKVFSFGSGKE 234
Query: 197 GQLGRG 202
GQLG G
Sbjct: 235 GQLGNG 240
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD-G 81
++ +G GQ G + +LR +L EL G R +ACG HT A SD G
Sbjct: 173 VFTFGAGKHGQLGHNSTQNELR--PRLVTELTGI------RVTQVACGRRHTLAYVSDLG 224
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVK 117
+F++G+ + GQLG+G + P +K +E +K
Sbjct: 225 KVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEDLK 260
>gi|430813410|emb|CCJ29231.1| unnamed protein product [Pneumocystis jirovecii]
Length = 506
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 123/451 (27%), Positives = 192/451 (42%), Gaps = 73/451 (16%)
Query: 14 VDNIPA----KSAIYVWGYNHSGQTGRKGRERQLRIPKQ------LPPELFGCPAGANSR 63
++ IP K +YV+G + G G E R+ K+ LP + G
Sbjct: 82 INEIPVLKQQKLCVYVFGTGSMSELGL-GPEPTGRVVKRPRLNPLLPYDTIGI------- 133
Query: 64 WLDIACGHEHTAAVASDGTLFTWGANEFGQLG------------DGTEEGRKHPE----- 106
+D+A G HTAA+ +G ++TWG N+ G LG D +E +P+
Sbjct: 134 -VDVAVGGMHTAAIDYEGNVYTWGVNDQGALGRDTTWDVNRADLDSDDEQMLNPKDSVPG 192
Query: 107 KVKQLQSEF-VKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSN----FPRLFWG 161
KV+ + V ++CG + AI + +++ WG + S+ F
Sbjct: 193 KVEGMPDGVKVVKMACGDSISVAITD---------KGQVYAWGSFRCSDGILGFSPQIKI 243
Query: 162 AFTPNTI-----ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKG 216
A P + I V CG+ HV+AL+ G + +WG + QLG + V +
Sbjct: 244 ARQPVHLKELNNIVSVVCGTDHVLALTAYGSVFSWGNGQQFQLGHRVVERTRLNALVPRE 303
Query: 217 YAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--P 274
+ L+KI + G YHS A+S +G V++WGL GQ G S D ++ P
Sbjct: 304 FG--------LKKIKAIGAGSYHSFAISHDGRVFSWGLNQFGQCGIESSGGEDGAVVSSP 355
Query: 275 RRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTY 334
V +LD I + G HS ALT +G L WG A QLG+ P+T ++
Sbjct: 356 THVQSLDPYNIVCITGGEHHSAALTQEGELLVWGRLDANQLGI-PRTYLPQYTIYDASNR 414
Query: 335 FRNIPILVVPNGVQLVA---CGHSHTLVYMR-DGRIHGWGY-NSYGQAANEKSTYAWYPS 389
R +PI G+ +++ CG H L + DG + WG+ SY P+
Sbjct: 415 PRFVPIPTKVPGIPIISQIYCGTHHNLAITKDDGSVWSWGFGESYQVGQGPSGNDVEVPT 474
Query: 390 PVDWCVGEVRKLAAG--GGHSAVLADACSLK 418
+D + + AG GG +VL S++
Sbjct: 475 KIDNTAIRGKVIVAGGAGGQFSVLLGIPSVE 505
>gi|297696825|ref|XP_002825580.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1 [Pongo abelii]
Length = 4864
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 173/382 (45%), Gaps = 79/382 (20%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI--- 139
++ WGA GQL E GR + + CG +CT I + +GT+
Sbjct: 4002 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVI----QANGTVLAC 4054
Query: 140 ---STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQV--SCGSV-HVVALSECGLLQAWGY 193
S RL GQ + L + ++ Q+ SCGS H +AL+E G + +WG
Sbjct: 4055 GEGSYGRL---GQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4111
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
+YG+LG G + + PR I EA + E++ Q+SCG HSA V+ +G+++T+G
Sbjct: 4112 GDYGKLGHG-NSDRQRRPRQI--------EALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4162
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL-YAWGGSQA 312
G G+LG L + + LP RV AL+G I VACG H+ A+++ G++ +A+G
Sbjct: 4163 NGDYGRLG---LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4219
Query: 313 GQLGLGPQTRSFSLIPNESDTY--------------------------FRNIPILVVPNG 346
G+LGLG T S P + D F ++ +P G
Sbjct: 4220 GKLGLGNSTAKSS--PQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4277
Query: 347 ------------------VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYP 388
++ VA G HTL +G ++ WG NS GQ + + P
Sbjct: 4278 RARNHNRPQQIPLLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP 4337
Query: 389 SPVDWCVGE-VRKLAAGGGHSA 409
+ V G+ VR+++AG HSA
Sbjct: 4338 TLVTGLQGKNVRQISAGRCHSA 4359
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 182/405 (44%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ PK P + S I G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQ-PKLAP---------SFSDAQTIEAGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG----T 138
+ G +G+LG G + +K+L E +SI ++ + +DG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQS---TLKKLTFEPHRSIK-------KVSSSKGSDGHTLAF 473
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ ++ WG + +P+L G ++C VS G H A++E G L
Sbjct: 474 TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGEL 532
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G + P ++K ++ + +VSCG H+ A+S++G
Sbjct: 533 YTWGEGDFGRLGHGDS-NSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 581
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ + AL G+FI+ V G S ALTS G +Y
Sbjct: 582 TVWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVY 636
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V V+ G SH L D
Sbjct: 637 AWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-VSIGDSHCLALSHDNE 685
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 166/377 (44%), Gaps = 85/377 (22%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPP-------- 51
MD + T+RP D ++ K +Y+WG GQ GR + +P P
Sbjct: 3979 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMVPAAAPSFSQAQQVI 4036
Query: 52 -------------ELFGCPAGANSRW------------------------LDIACGHE-H 73
+ C G+ R L +CG + H
Sbjct: 4037 CGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGH 4096
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
+ A+ G +F+WG ++G+LG G + ++ P +++ LQ E V +SCG +A +
Sbjct: 4097 SMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT--- 4153
Query: 134 ENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-----------ICQVSCGSVHVVAL 182
+DG +L+ +G ++ RL G + + I QV+CG H +A+
Sbjct: 4154 -SDG-----KLFTFGNG---DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV 4204
Query: 183 SECG-LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
S G ++ A+G +YG+LG G P+ I I +V+CG S
Sbjct: 4205 SADGSMVWAFGDGDYGKLGLG-NSTAKSSPQKIDVLCGI--------GIKKVACGTQFSV 4255
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A++++G VYT+G + L ++ ++ P+++ L G+ I+DVA G H+ AL S
Sbjct: 4256 ALTKDGHVYTFGQDRLIGLPEGRARNHNR---PQQIPLLAGVIIEDVAVGAEHTLALASN 4312
Query: 302 GALYAWGGSQAGQLGLG 318
G +YAWG + GQLGLG
Sbjct: 4313 GDVYAWGSNSEGQLGLG 4329
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 143/307 (46%), Gaps = 43/307 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V SDG
Sbjct: 4106 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTSDGK 4157
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG++
Sbjct: 4158 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA----DGSM--- 4210
Query: 143 RLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T P I I +V+CG+ VAL++ G + +
Sbjct: 4211 -VWAFGDG---DYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4266
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ I A + I V+ G H+ A++ NG+VY
Sbjct: 4267 GQDRLIGLPEG-RARNHNRPQQIPLLAGVI--------IEDVAVGAEHTLALASNGDVYA 4317
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWGGS 310
WG S GQLG L + P V L G ++ ++ G HS A T+ A G S
Sbjct: 4318 WGSNSEGQLG---LGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVS 4374
Query: 311 QAGQLGL 317
QLGL
Sbjct: 4375 VPLQLGL 4381
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P I I +V GS +AL+ G + AW
Sbjct: 583 -VWSFG---GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I VS G+ H A+S + EVY
Sbjct: 639 GCG--ACLGCGSSEATALRPKLIEELAA--------TRIVDVSIGDSHCLALSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDGI I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 30/228 (13%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +GQL G V+ A AP + QV CG+ + + NG V
Sbjct: 4005 WGAGRHGQLAEA-------GRNVMVPAA-----APSFSQAQQVICGQNCTFVIQANGTVL 4052
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGALYAW 307
G GS G+LG + S D +L + AL G + + +CG HS ALT G +++W
Sbjct: 4053 ACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSW 4109
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G R R I L VQ+ +CG H+ V DG++
Sbjct: 4110 GDGDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLF 4159
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
+G YG+ ++ P V G ++ ++A G H+ AV AD
Sbjct: 4160 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 4207
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VSE EVY WG S QL G +E + + +A + + G + +++ G
Sbjct: 368 VSETCEVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ A G G+LGLG +L + + R+I + G HTL +
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RSIKKVSSSKG------SDGHTLAFTT 475
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+G + WG YG+ + S+ YP + + G+V ++AG HSA + +
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
>gi|1477565|gb|AAD12586.1| p532 [Homo sapiens]
Length = 4861
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 173/382 (45%), Gaps = 79/382 (20%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI--- 139
++ WGA GQL E GR + + CG +CT I + +GT+
Sbjct: 3999 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVI----QANGTVLAC 4051
Query: 140 ---STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQV--SCGSV-HVVALSECGLLQAWGY 193
S RL GQ + L + ++ Q+ SCGS H +AL+E G + +WG
Sbjct: 4052 GEGSYGRL---GQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
+YG+LG G + + PR I EA + E++ Q+SCG HSA V+ +G+++T+G
Sbjct: 4109 GDYGKLGHG-NSDRQRRPRQI--------EALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4159
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL-YAWGGSQA 312
G G+LG L + + LP RV AL+G I VACG H+ A+++ G++ +A+G
Sbjct: 4160 NGDYGRLG---LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4216
Query: 313 GQLGLGPQTRSFSLIPNESDTY--------------------------FRNIPILVVPNG 346
G+LGLG T S P + D F ++ +P G
Sbjct: 4217 GKLGLGNSTAKSS--PQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4274
Query: 347 ------------------VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYP 388
++ VA G HTL +G ++ WG NS GQ + + P
Sbjct: 4275 RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP 4334
Query: 389 SPVDWCVGE-VRKLAAGGGHSA 409
+ V G+ VR+++AG HSA
Sbjct: 4335 TLVTGLQGKNVRQISAGRCHSA 4356
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 182/405 (44%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ PK P + S I G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQ-PKLAP---------SFSDAQTIEAGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG----T 138
+ G +G+LG G + +K+L E +SI ++ + +DG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQS---TLKKLTFEPHRSIK-------KVSSSKGSDGHTLAF 473
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ ++ WG + +P+L G ++C VS G H A++E G L
Sbjct: 474 TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGEL 532
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G + P ++K ++ + +VSCG H+ A+S++G
Sbjct: 533 YTWGEGDFGRLGHGDS-NSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 581
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ + AL G+FI+ V G S ALTS G +Y
Sbjct: 582 TVWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVY 636
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V V+ G SH L D
Sbjct: 637 AWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-VSIGDSHCLALSHDNE 685
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 166/377 (44%), Gaps = 85/377 (22%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPP-------- 51
MD + T+RP D ++ K +Y+WG GQ GR + +P P
Sbjct: 3976 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMVPAAAPSFSQAQQVI 4033
Query: 52 -------------ELFGCPAGANSRW------------------------LDIACGHE-H 73
+ C G+ R L +CG + H
Sbjct: 4034 CGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGH 4093
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
+ A+ G +F+WG ++G+LG G + ++ P +++ LQ E V +SCG +A +
Sbjct: 4094 SMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT--- 4150
Query: 134 ENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-----------ICQVSCGSVHVVAL 182
+DG +L+ +G ++ RL G + + I QV+CG H +A+
Sbjct: 4151 -SDG-----KLFTFGNG---DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV 4201
Query: 183 SECG-LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
S G ++ A+G +YG+LG G P+ I I +V+CG S
Sbjct: 4202 SADGSMVWAFGDGDYGKLGLG-NSTAKSSPQKIDVLCGI--------GIKKVACGTQFSV 4252
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A++++G VYT+G + L ++ ++ P+++ L G+ I+DVA G H+ AL S
Sbjct: 4253 ALTKDGHVYTFGQDRLIGLPEGRARNHNR---PQQIPVLAGVIIEDVAVGAEHTLALASN 4309
Query: 302 GALYAWGGSQAGQLGLG 318
G +YAWG + GQLGLG
Sbjct: 4310 GDVYAWGSNSEGQLGLG 4326
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 143/307 (46%), Gaps = 43/307 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V SDG
Sbjct: 4103 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTSDGK 4154
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG++
Sbjct: 4155 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA----DGSM--- 4207
Query: 143 RLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T P I I +V+CG+ VAL++ G + +
Sbjct: 4208 -VWAFGDG---DYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4263
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ I A + I V+ G H+ A++ NG+VY
Sbjct: 4264 GQDRLIGLPEG-RARNHNRPQQIPVLAGVI--------IEDVAVGAEHTLALASNGDVYA 4314
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWGGS 310
WG S GQLG L + P V L G ++ ++ G HS A T+ A G S
Sbjct: 4315 WGSNSEGQLG---LGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVS 4371
Query: 311 QAGQLGL 317
QLGL
Sbjct: 4372 VPLQLGL 4378
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P I I +V GS +AL+ G + AW
Sbjct: 583 -VWSFG---GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I VS G+ H A+S + EVY
Sbjct: 639 GCG--ACLGCGSSEATALRPKLIEELAA--------TRIVDVSIGDSHCLALSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDGI I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 30/228 (13%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +GQL G V+ A AP + QV CG+ + + NG V
Sbjct: 4002 WGAGRHGQLAEA-------GRNVMVPAA-----APSFSQAQQVICGQNCTFVIQANGTVL 4049
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGALYAW 307
G GS G+LG + S D +L + AL G + + +CG HS ALT G +++W
Sbjct: 4050 ACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSW 4106
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G R R I L VQ+ +CG H+ V DG++
Sbjct: 4107 GDGDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLF 4156
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
+G YG+ ++ P V G ++ ++A G H+ AV AD
Sbjct: 4157 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 4204
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VSE EVY WG S QL G +E + + +A + + G + +++ G
Sbjct: 368 VSETCEVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ A G G+LGLG +L + + R+I + G HTL +
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RSIKKVSSSKG------SDGHTLAFTT 475
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+G + WG YG+ + S+ YP + + G+V ++AG HSA + +
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
>gi|328865201|gb|EGG13587.1| hypothetical protein DFA_11348 [Dictyostelium fasciculatum]
Length = 628
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 144/354 (40%), Gaps = 84/354 (23%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
IY WGYN+ GQ + +++P ++ + R L +A G H A+ G
Sbjct: 98 IYSWGYNYFGQCASNS-QSIIQLPTRVEQLI-----NMQLRVLAMASGDSHVLAIVHPGN 151
Query: 83 -LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
++ WG N +GQLG G + R P + AIA P
Sbjct: 152 QVYAWGCNRWGQLGTGDQTNRATPTPI-------------------AIATP--------- 183
Query: 142 SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGR 201
T+ VSCG+ H +ALS G L +WG G+ G
Sbjct: 184 -------------------------TVFTSVSCGAQHSMALSNYGELYSWGCGTGGRTGH 218
Query: 202 GITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG 261
G L P+V+ ++IT ++ G HSAA G VYTWG GQLG
Sbjct: 219 GSEAPSLS-PQVVSALVG--------KQITSMAGGMLHSAATDLRGSVYTWGWNKYGQLG 269
Query: 262 HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQT 321
+ + K L P ++ ++ + V CG H+ LT++G +Y++G + GQLG+G
Sbjct: 270 N---NTAKKHLSPNKLRDMEKHHVVKVTCGKNHTHLLTAEGHIYSFGFNVCGQLGVGGYA 326
Query: 322 RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
S P + D +P + G+ HTL G ++ WGY S G
Sbjct: 327 DSQQ--PKKVD----------LPEHAVDIVSGYYHTLCLTNKGNVYSWGYMSDG 368
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 104/210 (49%), Gaps = 25/210 (11%)
Query: 169 ICQVSCGSVHVVALSECG-LLQAWGYNEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPE 226
+ ++ G HV+A+ G + AWG N +GQLG G T P I F
Sbjct: 133 VLAMASGDSHVLAIVHPGNQVYAWGCNRWGQLGTGDQTNRATPTPIAIATPTVF------ 186
Query: 227 LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
T VSCG HS A+S GE+Y+WG G+ G+ GH S L P+ V AL G I
Sbjct: 187 ----TSVSCGAQHSMALSNYGELYSWGCGTGGRTGHGSEA---PSLSPQVVSALVGKQIT 239
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
+A G +HS A +G++Y WG ++ GQLG + S PN+ R++ +
Sbjct: 240 SMAGGMLHSAATDLRGSVYTWGWNKYGQLGNNTAKKHLS--PNK----LRDME----KHH 289
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
V V CG +HT + +G I+ +G+N GQ
Sbjct: 290 VVKVTCGKNHTHLLTAEGHIYSFGFNVCGQ 319
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 141/337 (41%), Gaps = 69/337 (20%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG N GQ G G + P P P + + ++CG +H+ A+++ G
Sbjct: 153 VYAWGCNRWGQLG-TGDQTNRATPT---PIAIATP----TVFTSVSCGAQHSMALSNYGE 204
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L++WG G+ G G+E P+ V L + + S++ G +AA T
Sbjct: 205 LYSWGCGTGGRTGHGSEAPSLSPQVVSALVGKQITSMAGGMLHSAA---------TDLRG 255
Query: 143 RLWVWGQNQ----GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG N+ G+N + +PN + + +V+CG H L+ G + ++
Sbjct: 256 SVYTWGWNKYGQLGNNTAKKH---LSPNKLRDMEKHHVVKVTCGKNHTHLLTAEGHIYSF 312
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G+N GQLG G + Q +V + P E + G YH+ ++ G VY+
Sbjct: 313 GFNVCGQLGVGGYADSQQPKKV---------DLP--EHAVDIVSGYYHTLCLTNKGNVYS 361
Query: 252 WGLGSVGQLGHCSL--QSGDKELLPRRVV------ALD-------------------GIF 284
WG S G LG + +L+P + ++D G
Sbjct: 362 WGYMSDGALGLGDIAGHQSKPKLIPLSHIRHNYSDSMDSYNSIYESGGEGTNPRYAKGDV 421
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQT 321
+ +A G +S +T+ G LY +G + ++G G T
Sbjct: 422 AEKIAAGAWNSAIITTSGKLYCFGFGDSYRIGNGTNT 458
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 73/166 (43%), Gaps = 17/166 (10%)
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK--DVACGGVHSCALTSKG-AL 304
++Y+WG GQ C+ S LP RV L + ++ +A G H A+ G +
Sbjct: 97 QIYSWGYNYFGQ---CASNSQSIIQLPTRVEQLINMQLRVLAMASGDSHVLAIVHPGNQV 153
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 364
YAWG ++ GQLG G QT + P + P V+CG H++ G
Sbjct: 154 YAWGCNRWGQLGTGDQTNRATPTP----------IAIATPTVFTSVSCGAQHSMALSNYG 203
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSA 409
++ WG + G+ + + P V VG ++ +A G HSA
Sbjct: 204 ELYSWGCGTGGRTGHGSEAPSLSPQVVSALVGKQITSMAGGMLHSA 249
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+ ++Y WG+N GQ G ++ L K E + + CG HT + +
Sbjct: 254 RGSVYTWGWNKYGQLGNNTAKKHLSPNKLRDME--------KHHVVKVTCGKNHTHLLTA 305
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
+G ++++G N GQLG G + P+KV
Sbjct: 306 EGHIYSFGFNVCGQLGVGGYADSQQPKKV 334
>gi|428171675|gb|EKX40590.1| hypothetical protein GUITHDRAFT_75473, partial [Guillardia theta
CCMP2712]
Length = 413
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 165/353 (46%), Gaps = 47/353 (13%)
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
D +F G N G+LG T + V+ L+ + + ++ G+ + + E +G +
Sbjct: 39 DCGVFACGQNRKGELGHSTFREQVEMSLVQSLRRKRIVKVAAGSETSYFLTE----EGKV 94
Query: 140 STSRLWVWGQ-----NQGS-NFPRLF------WGAFTPNTIICQVSC--GSVHVVALSEC 185
L GQ +QGS N + + P+ + QVSC G+ HV+ ++
Sbjct: 95 YCCGLNSTGQLARETHQGSANRSKEYSSDIELMEGLPPDCKVVQVSCFNGAEHVLVVTSA 154
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + + G N +GQLG G T P ++ L E+ + ++ SC +HS VS
Sbjct: 155 GQVYSCGCNNHGQLGLGST---KMSPSLL------LVESLKHVRVLSASCSYHHSVVVSS 205
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G +++GL GQLG + + +LLP RV ++ ACG H+ LT +G ++
Sbjct: 206 DGSAFSFGLNDCGQLG---IGTRPNQLLPHRVELPSPHLVRLAACGQYHTIFLTEEGMVF 262
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVYMR 362
+ G + GQLGLG ++ + N+P L+ ++ACG+SHT V +
Sbjct: 263 SCGKNLNGQLGLGSRSST-------------NVPTLIAALQERPASMIACGYSHTCVVLE 309
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADA 414
DG++ +GYN GQ + P V+ +V K++ G + VL+++
Sbjct: 310 DGKLFTFGYNHQGQLGLGHTDSVSSPMQVETLRNVKVVKISCGTHFTCVLSES 362
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 134/294 (45%), Gaps = 31/294 (10%)
Query: 11 ARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACG 70
A V + + +Y G N+ GQ G ++ P L + + R L +C
Sbjct: 145 AEHVLVVTSAGQVYSCGCNNHGQLGLG--------STKMSPSLLLVESLKHVRVLSASCS 196
Query: 71 HEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIA 130
+ H+ V+SDG+ F++G N+ GQLG GT + P +V+ V+ +CG + T +
Sbjct: 197 YHHSVVVSSDGSAFSFGLNDCGQLGIGTRPNQLLPHRVELPSPHLVRLAACGQYHTIFLT 256
Query: 131 EPRENDGTISTSRLWVWGQ-----NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
E +G + + + GQ +N P L A ++CG H + E
Sbjct: 257 E----EGMVFSCGKNLNGQLGLGSRSSTNVPTLI--AALQERPASMIACGYSHTCVVLED 310
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G L +GYN GQLG G T + + P ++ K+ ++SCG + + +SE
Sbjct: 311 GKLFTFGYNHQGQLGLGHT-DSVSSPMQVETLRNV--------KVVKISCGTHFTCVLSE 361
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT 299
+GE++++G GQLG L L+P V ++ + ++ACG H A++
Sbjct: 362 SGELWSFGCNCHGQLG---LGDSTDRLVPVLVPSMTKKNLSEIACGFHHLVAIS 412
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 158/347 (45%), Gaps = 42/347 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPE---LFGCPAGANSRWLDIAC--GHEHTAAV 77
+Y G N +GQ R+ + K+ + + G P + + + ++C G EH V
Sbjct: 94 VYCCGLNSTGQLARETHQGSANRSKEYSSDIELMEGLPP--DCKVVQVSCFNGAEHVLVV 151
Query: 78 ASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG 137
S G +++ G N GQLG G+ + V+ L+ V S SC H + ++ +DG
Sbjct: 152 TSAGQVYSCGCNNHGQLGLGSTKMSPSLLLVESLKHVRVLSASCSYHHSVVVS----SDG 207
Query: 138 TISTSRLWVWGQNQGSNFPR--LFWGAFTPNTIICQVS-CGSVHVVALSECGLLQAWGYN 194
+ + L GQ P L P+ + +++ CG H + L+E G++ + G N
Sbjct: 208 SAFSFGLNDCGQLGIGTRPNQLLPHRVELPSPHLVRLAACGQYHTIFLTEEGMVFSCGKN 267
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
GQLG G + P +I L E P + ++CG H+ V E+G+++T+G
Sbjct: 268 LNGQLGLG-SRSSTNVPTLIAA----LQERPA----SMIACGYSHTCVVLEDGKLFTFGY 318
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG L D P +V L + + ++CG +C L+ G L+++G + GQ
Sbjct: 319 NHQGQLG---LGHTDSVSSPMQVETLRNVKVVKISCGTHFTCVLSESGELWSFGCNCHGQ 375
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILV---VPNGVQLVACGHSHTL 358
LGLG D+ R +P+LV + +ACG H +
Sbjct: 376 LGLG-------------DSTDRLVPVLVPSMTKKNLSEIACGFHHLV 409
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 149/379 (39%), Gaps = 40/379 (10%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ G N G+ G Q+ E+ + R + +A G E + + +G
Sbjct: 42 VFACGQNRKGELGHSTFREQV--------EMSLVQSLRRKRIVKVAAGSETSYFLTEEGK 93
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI--SCGAHCTAAIAEPRENDGTIS 140
++ G N GQL T +G + K E ++ + C + S
Sbjct: 94 VYCCGLNSTGQLARETHQGSANRSKEYSSDIELMEGLPPDCKVVQVSCFNGAEHVLVVTS 153
Query: 141 TSRLWVWGQNQGSNF--------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
+++ G N P L + + SC H V +S G ++G
Sbjct: 154 AGQVYSCGCNNHGQLGLGSTKMSPSLLLVESLKHVRVLSASCSYHHSVVVSSDGSAFSFG 213
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
N+ GQLG G L RV E P + +CG+YH+ ++E G V++
Sbjct: 214 LNDCGQLGIGTRPNQLLPHRV---------ELPSPHLVRLAACGQYHTIFLTEEGMVFSC 264
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G GQLG L S +P + AL +ACG H+C + G L+ +G +
Sbjct: 265 GKNLNGQLG---LGSRSSTNVPTLIAALQERPASMIACGYSHTCVVLEDGKLFTFGYNHQ 321
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYN 372
GQLGLG T S S P + +T RN+ ++ + +CG T V G + +G N
Sbjct: 322 GQLGLG-HTDSVS-SPMQVET-LRNVKVVKI-------SCGTHFTCVLSESGELWSFGCN 371
Query: 373 SYGQAANEKSTYAWYPSPV 391
+GQ ST P V
Sbjct: 372 CHGQLGLGDSTDRLVPVLV 390
>gi|383422561|gb|AFH34494.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4853
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 173/382 (45%), Gaps = 79/382 (20%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI--- 139
++ WGA GQL E GR + + CG +CT I + +GT+
Sbjct: 3991 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVI----QANGTVLAC 4043
Query: 140 ---STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQV--SCGSV-HVVALSECGLLQAWGY 193
S RL GQ + L + ++ Q+ SCGS H +AL+E G + +WG
Sbjct: 4044 GEGSYGRL---GQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4100
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
+YG+LG G + + PR I EA + E++ Q+SCG HSA V+ +G+++T+G
Sbjct: 4101 GDYGKLGHG-NSDRQRRPRQI--------EALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4151
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL-YAWGGSQA 312
G G+LG L + + LP RV AL+G I VACG H+ A+++ G++ +A+G
Sbjct: 4152 NGDYGRLG---LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4208
Query: 313 GQLGLGPQTRSFSLIPNESDTY--------------------------FRNIPILVVPNG 346
G+LGLG T S P + D F ++ +P G
Sbjct: 4209 GKLGLGNSTAKSS--PQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4266
Query: 347 ------------------VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYP 388
++ VA G HTL +G ++ WG NS GQ + + P
Sbjct: 4267 RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP 4326
Query: 389 SPVDWCVGE-VRKLAAGGGHSA 409
+ V G+ VR+++AG HSA
Sbjct: 4327 TLVTGLQGKNVRQISAGRCHSA 4348
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 182/405 (44%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ PK P + S I G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQ-PKLAP---------SFSDAQTIEAGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG----T 138
+ G +G+LG G + +K+L E +SI ++ + +DG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQS---TLKKLTFEPHRSIK-------KVSSSKGSDGHTLAF 473
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ ++ WG + +P+L G ++C VS G H A++E G L
Sbjct: 474 TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGEL 532
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G + P ++K ++ + +VSCG H+ A+S++G
Sbjct: 533 YTWGEGDFGRLGHGDS-NSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 581
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ + AL G+FI+ V G S ALTS G +Y
Sbjct: 582 TVWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVY 636
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V V+ G SH L D
Sbjct: 637 AWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-VSIGDSHCLALSHDNE 685
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 166/377 (44%), Gaps = 85/377 (22%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPP-------- 51
MD + T+RP D ++ K +Y+WG GQ GR + +P P
Sbjct: 3968 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMVPAAAPSFSQAQQVI 4025
Query: 52 -------------ELFGCPAGANSRW------------------------LDIACGHE-H 73
+ C G+ R L +CG + H
Sbjct: 4026 CGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGH 4085
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
+ A+ G +F+WG ++G+LG G + ++ P +++ LQ E V +SCG +A +
Sbjct: 4086 SMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT--- 4142
Query: 134 ENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-----------ICQVSCGSVHVVAL 182
+DG +L+ +G ++ RL G + + I QV+CG H +A+
Sbjct: 4143 -SDG-----KLFTFGNG---DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV 4193
Query: 183 SECG-LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
S G ++ A+G +YG+LG G P+ I I +V+CG S
Sbjct: 4194 SADGSMVWAFGDGDYGKLGLG-NSTAKSSPQKIDVLCGI--------GIKKVACGTQFSV 4244
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A++++G VYT+G + L ++ ++ P+++ L G+ I+DVA G H+ AL S
Sbjct: 4245 ALTKDGHVYTFGQDRLIGLPEGRARNHNR---PQQIPVLAGMIIEDVAVGAEHTLALASN 4301
Query: 302 GALYAWGGSQAGQLGLG 318
G +YAWG + GQLGLG
Sbjct: 4302 GDVYAWGSNSEGQLGLG 4318
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 143/307 (46%), Gaps = 43/307 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V SDG
Sbjct: 4095 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTSDGK 4146
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG++
Sbjct: 4147 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA----DGSM--- 4199
Query: 143 RLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T P I I +V+CG+ VAL++ G + +
Sbjct: 4200 -VWAFGDG---DYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4255
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ I A + I V+ G H+ A++ NG+VY
Sbjct: 4256 GQDRLIGLPEG-RARNHNRPQQIPVLAGMI--------IEDVAVGAEHTLALASNGDVYA 4306
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWGGS 310
WG S GQLG L + P V L G ++ ++ G HS A T+ A G S
Sbjct: 4307 WGSNSEGQLG---LGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVS 4363
Query: 311 QAGQLGL 317
QLGL
Sbjct: 4364 VPLQLGL 4370
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P I I +V GS +AL+ G + AW
Sbjct: 583 -VWSFG---GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I VS G+ H A+S + EVY
Sbjct: 639 GCG--ACLGCGSSEATALRPKLIEELAA--------TRIVDVSIGDSHCLALSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDGI I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 30/228 (13%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +GQL G V+ A AP + QV CG+ + + NG V
Sbjct: 3994 WGAGRHGQLAEA-------GRNVMVPAA-----APSFSQAQQVICGQNCTFVIQANGTVL 4041
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGALYAW 307
G GS G+LG + S D +L + AL G + + +CG HS ALT G +++W
Sbjct: 4042 ACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSW 4098
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G R R I L VQ+ +CG H+ V DG++
Sbjct: 4099 GDGDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLF 4148
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
+G YG+ ++ P V G ++ ++A G H+ AV AD
Sbjct: 4149 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 4196
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VSE EVY WG S QL G +E + + +A + + G + +++ G
Sbjct: 368 VSETCEVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ A G G+LGLG +L + + R+I + G HTL +
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RSIKKVSSSKG------SDGHTLAFTT 475
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+G + WG YG+ + S+ YP + + G+V ++AG HSA + +
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
>gi|357137054|ref|XP_003570116.1| PREDICTED: uncharacterized protein LOC100825305 isoform 1
[Brachypodium distachyon]
Length = 1005
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 154/327 (47%), Gaps = 42/327 (12%)
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
+++CG +H A V G +F+WG + G+LG G HP+ ++ L VK+I+ GA
Sbjct: 272 NVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKVSVGVLHPKIIESLAFTHVKAIAFGAKH 331
Query: 126 TAAIAEPRE----NDGTISTSRLWVW-GQNQGSN-FPRLFWGAFTPNTIICQVSCGSVHV 179
T A+A E +GT S L VW Q Q S +P +G +++ +++CG H
Sbjct: 332 TCALAISGELFEWGEGTHS---LGVWDDQCQRSQWYPHKLFGPLEGVSVV-KMACGQWHT 387
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
+S G L +G +G LG G T + P+ ++ ++ V+CG +H
Sbjct: 388 AIISSSGQLFTYGDGTFGVLGHGDT-SSVARPKEVESLKGL--------RVKAVACGPWH 438
Query: 240 SAAVSE----------NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+AA+ E +G+++TWG G+LGH +S +L+P V AL V+
Sbjct: 439 TAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKES---KLVPTCVKALTDSDFAQVS 495
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
C + ALT G ++ G + GQLG S L D+ ++ + V+
Sbjct: 496 CAKALTVALTITGVVFTIGSKEHGQLG------SHRL----DDSSICSVEGPLKTEFVRE 545
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
++ G SH V +G++ WG + GQ
Sbjct: 546 ISSGSSHVAVLTMNGKVFTWGKGTEGQ 572
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 127/262 (48%), Gaps = 31/262 (11%)
Query: 50 PPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK 109
P +LFG G + + +ACG HTA ++S G LFT+G FG LG G P++V+
Sbjct: 365 PHKLFGPLEGVSV--VKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGDTSSVARPKEVE 422
Query: 110 QLQSEFVKSISCGAHCTAAIAEPRENDGTISTS----RLWVWGQ---------NQGSNFP 156
L+ VK+++CG TAAI E GT+ ++ +L+ WG ++ S
Sbjct: 423 SLKGLRVKAVACGPWHTAAIVEIL---GTVKSNAPSGKLFTWGDADRGKLGHSDKESKLV 479
Query: 157 RLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKG 216
A T ++ QVSC VAL+ G++ G E+GQLG R+
Sbjct: 480 PTCVKALT-DSDFAQVSCAKALTVALTITGVVFTIGSKEHGQLG---------SHRLDDS 529
Query: 217 YAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRR 276
++ + E + ++S G H A ++ NG+V+TWG G+ GQLG L + P
Sbjct: 530 SICSVEGPLKTEFVREISSGSSHVAVLTMNGKVFTWGKGTEGQLG---LGNYVDRSSPTL 586
Query: 277 VVALDGIFIKDVACGGVHSCAL 298
V AL+ + +ACG + A+
Sbjct: 587 VEALEDKQVDSIACGSNFTVAV 608
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 93/197 (47%), Gaps = 17/197 (8%)
Query: 221 LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL 280
L + ++ + VSCGE H+A V++ GEV++WG G+LGH + L P+ + +L
Sbjct: 261 LLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGH---KVSVGVLHPKIIESL 317
Query: 281 DGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLG---PQTRSFSLIPNESDTYFRN 337
+K +A G H+CAL G L+ WG G LG Q + P++
Sbjct: 318 AFTHVKAIAFGAKHTCALAISGELFEWG---EGTHSLGVWDDQCQRSQWYPHKLFGPLEG 374
Query: 338 IPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG- 396
+ ++ +ACG HT + G++ +G ++G + ++ P V+ G
Sbjct: 375 VSVVK-------MACGQWHTAIISSSGQLFTYGDGTFGVLGHGDTSSVARPKEVESLKGL 427
Query: 397 EVRKLAAGGGHSAVLAD 413
V+ +A G H+A + +
Sbjct: 428 RVKAVACGPWHTAAIVE 444
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%)
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
+I+ G H A + +G +FTWG GQLG G R P V+ L+ + V SI+CG++
Sbjct: 545 EISSGSSHVAVLTMNGKVFTWGKGTEGQLGLGNYVDRSSPTLVEALEDKQVDSIACGSNF 604
Query: 126 TAAIAEPRENDG 137
T A+ R G
Sbjct: 605 TVAVCLHRSISG 616
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 77/178 (43%), Gaps = 23/178 (12%)
Query: 248 EVYTWG--LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+++ WG LGSV S + LPR + + + +++V+CG H+ +T +G ++
Sbjct: 234 DIFVWGDVLGSVLDDRDTSKANVS---LPRLLNSTQILDVQNVSCGEKHAAIVTKQGEVF 290
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
+WG G+LG ES + V+ +A G HT G
Sbjct: 291 SWGKEDGGRLGHKVSVGVLHPKIIESLAF----------THVKAIAFGAKHTCALAISGE 340
Query: 366 IHGW--GYNSYGQAANEKSTYAWYPS----PVDWCVGEVRKLAAGGGHSAVLADACSL 417
+ W G +S G ++ WYP P++ V K+A G H+A+++ + L
Sbjct: 341 LFEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEGV--SVVKMACGQWHTAIISSSGQL 396
>gi|449673459|ref|XP_002164132.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Hydra
magnipapillata]
Length = 2284
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 161/353 (45%), Gaps = 53/353 (15%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
+ ++ GY ++GQ G E P L N + + + G H A++SD
Sbjct: 1494 ALVFATGYGNNGQLGLGYSE------TVTSPRLLESIKHINIKKISVHSGGRHCLALSSD 1547
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F+WG E G+LG G + P++++ + + +I G +AAI E
Sbjct: 1548 GEVFSWGEGEDGKLGHGNRQTSSQPKRIEFFCGKIITNICAGGSHSAAIGLNGE------ 1601
Query: 141 TSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGS--VHVVALSECGL 187
L+ WG+ + + RL G P + + V+CGS + ++
Sbjct: 1602 ---LYTWGKGR---YGRLGHGDSDDQLKPKQVEALQFFFVLDVACGSGDAQTLCITNDDN 1655
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ +WG +YG+LGRG +G + P +I+ + + I +V CG S A+++ G
Sbjct: 1656 VWSWGDGDYGKLGRG-GSDGCKVPMIIEDLSG--------KGIVKVECGSQFSMALTKYG 1706
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
+YTWG G +LGH + + + P V AL + ++CG +H T +G +Y W
Sbjct: 1707 VLYTWGKGDYYRLGHGTEEHVRR---PMMVTALFNKIVTSISCGSLHCVVCTDEGEVYCW 1763
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
G + GQLG G ++I ++ T + ++ + ++CG +HT+ +
Sbjct: 1764 GDNDEGQLGDG------TIIARQTPT----LNTFLLNKKIDRISCGSAHTIAW 1806
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 144/320 (45%), Gaps = 69/320 (21%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
+ + G H A+ SDG F+WG E GQLG G P ++ + V ISCG+
Sbjct: 649 VSVHSGGNHVMALTSDGLAFSWGDGENGQLGHGNLMSCSKPHLIEAFVGKIVTDISCGSA 708
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVS 173
+AAI E + L+ WG +F RL G P + + QVS
Sbjct: 709 HSAAIVENK---------YLYTWGL---GDFGRLGHGDEETILQPKFVTHFLGYNVVQVS 756
Query: 174 CGS--VHVVALSECGLLQAWGYNEYGQLGRG--------ITCEGLQGPRVIKGYAKFLDE 223
CGS V +++ + +WG ++G+LGRG + E L+G ++ K
Sbjct: 757 CGSRDAQTVCITDDDKVWSWGDGDFGKLGRGGSERCLIPVEVEQLRGLQICK-------- 808
Query: 224 APELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
+ CG + A+++ G V+TWG G +LGH + + P+ V L G
Sbjct: 809 ---------ILCGAQFTVALTKTGTVWTWGKGDFYRLGHGTDIHVRQ---PKLVEGLRGK 856
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
+ D+A G +H A+T G +++WG + GQLG G +T + +P L+
Sbjct: 857 HVIDIAVGALHCLAVTQDGEVFSWGDNDHGQLGTG-------------ETDVKKVPNLIT 903
Query: 344 ---PNGVQLVACGHSHTLVY 360
+ ++ VACG SH++ +
Sbjct: 904 GLHNHRIKYVACGSSHSIAW 923
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 145/336 (43%), Gaps = 39/336 (11%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE--NDGTIS 140
+F WG N+ QLG K P L S K I+ G+ T I + + G S
Sbjct: 560 VFMWGLNDKDQLGGLKGSKVKSPTLCDHLSSLQCKFIAGGSKSTFFITNKGKLYSCGESS 619
Query: 141 TSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLG 200
+L + PRL G V G HV+AL+ GL +WG E GQLG
Sbjct: 620 FGKLGIGDITGNVTSPRLVTGLNQLIVTKVSVHSGGNHVMALTSDGLAFSWGDGENGQLG 679
Query: 201 RG--ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVG 258
G ++C P +I+ + + +T +SCG HSAA+ EN +YTWGLG G
Sbjct: 680 HGNLMSC---SKPHLIEAFVG--------KIVTDISCGSAHSAAIVENKYLYTWGLGDFG 728
Query: 259 QLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQ 314
+LGH GD+E L P+ V G + V+CG + +T +++WG G+
Sbjct: 729 RLGH-----GDEETILQPKFVTHFLGYNVVQVSCGSRDAQTVCITDDDKVWSWGDGDFGK 783
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGRIHGWGYN 372
LG G R LIP E + G+Q+ + CG T+ + G + WG
Sbjct: 784 LGRGGSER--CLIPVEVEQL----------RGLQICKILCGAQFTVALTKTGTVWTWGKG 831
Query: 373 SYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGH 407
+ + + + P V+ G+ V +A G H
Sbjct: 832 DFYRLGHGTDIHVRQPKLVEGLRGKHVIDIAVGALH 867
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 182/440 (41%), Gaps = 67/440 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+++WG N Q G L+ K P L C ++ + IA G + T + + G
Sbjct: 560 VFMWGLNDKDQLG------GLKGSKVKSPTL--CDHLSSLQCKFIAGGSKSTFFITNKGK 611
Query: 83 LFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
L++ G + FG+LG G G P V L V +S G H A + DG
Sbjct: 612 LYSCGESSFGKLGIGDITGNVTSPRLVTGLNQLIVTKVSVHSGGNHVMALTS-----DGL 666
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ WG + P L AF I+ +SCGS H A+ E L
Sbjct: 667 A-----FSWGDGENGQLGHGNLMSCSKPHLI-EAFV-GKIVTDISCGSAHSAAIVENKYL 719
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAVSEN 246
WG ++G+LG G E + P+ + + + + QVSCG + + ++++
Sbjct: 720 YTWGLGDFGRLGHGDE-ETILQPKFVTHFLGY--------NVVQVSCGSRDAQTVCITDD 770
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
+V++WG G G+LG ++ L+P V L G+ I + CG + ALT G ++
Sbjct: 771 DKVWSWGDGDFGKLGR---GGSERCLIPVEVEQLRGLQICKILCGAQFTVALTKTGTVWT 827
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLVYMRDG 364
WG +LG G +D + R ++ G ++ A G H L +DG
Sbjct: 828 WGKGDFYRLGHG------------TDIHVRQPKLVEGLRGKHVIDIAVGALHCLAVTQDG 875
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSA----VLADACSLKE 419
+ WG N +GQ ++ P+ + ++ +A G HS + AC + +
Sbjct: 876 EVFSWGDNDHGQLGTGETDVKKVPNLITGLHNHRIKYVACGSSHSIAWTEITTSACIIDK 935
Query: 420 LCEFRLAESVTLSNASEIED 439
F + +N ++++
Sbjct: 936 PLSFEVNYDPMATNLVKVKE 955
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 134/299 (44%), Gaps = 55/299 (18%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G R+ + PK++ E F N I G H+AA+ +G
Sbjct: 1550 VFSWGEGEDGKLGHGNRQTSSQ-PKRI--EFFCGKIITN-----ICAGGSHSAAIGLNGE 1601
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG G + + P++V+ LQ FV ++CG+ + +++
Sbjct: 1602 LYTWGKGRYGRLGHGDSDDQLKPKQVEALQFFFVLDVACGSGDAQTLCITNDDN------ 1655
Query: 143 RLWVWGQNQ-------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
+W WG GS+ G P I I +V CGS +AL++ G+L
Sbjct: 1656 -VWSWGDGDYGKLGRGGSD------GCKVPMIIEDLSGKGIVKVECGSQFSMALTKYGVL 1708
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG +Y +LG G T E ++ P ++ + +T +SCG H ++ GE
Sbjct: 1709 YTWGKGDYYRLGHG-TEEHVRRPMMVTALFN--------KIVTSISCGSLHCVVCTDEGE 1759
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF----IKDVACGGVHSCALTSKGA 303
VY WG GQL GD ++ R+ L+ I ++CG H+ A ++ A
Sbjct: 1760 VYCWGDNDEGQL-------GDGTIIARQTPTLNTFLLNKKIDRISCGSAHTIAWSTSKA 1811
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 144/352 (40%), Gaps = 51/352 (14%)
Query: 74 TAAVASDGTL-FTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAI 129
T + +DG L F G GQLG G E P ++ ++ +K IS G HC A
Sbjct: 1486 TVCITTDGALVFATGYGNNGQLGLGYSETVTSPRLLESIKHINIKKISVHSGGRHCLAL- 1544
Query: 130 AEPRENDGTISTSRLWVWGQ----------NQGSNFPRLFWGAFTPNTIICQVSCGSVHV 179
+DG + + WG+ Q S+ P+ F II + G H
Sbjct: 1545 ----SSDGEV-----FSWGEGEDGKLGHGNRQTSSQPKRI--EFFCGKIITNICAGGSHS 1593
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--E 237
A+ G L WG YG+LG G + + L+ +V EA + + V+CG +
Sbjct: 1594 AAIGLNGELYTWGKGRYGRLGHGDSDDQLKPKQV---------EALQFFFVLDVACGSGD 1644
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
+ ++ + V++WG G G+LG D +P + L G I V CG S A
Sbjct: 1645 AQTLCITNDDNVWSWGDGDYGKLGR---GGSDGCKVPMIIEDLSGKGIVKVECGSQFSMA 1701
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT 357
LT G LY WG +LG G T P F I V ++CG H
Sbjct: 1702 LTKYGVLYTWGKGDYYRLGHG--TEEHVRRPMMVTALFNKI--------VTSISCGSLHC 1751
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
+V +G ++ WG N GQ + P+ + + ++ +++ G H+
Sbjct: 1752 VVCTDEGEVYCWGDNDEGQLGDGTIIARQTPTLNTFLLNKKIDRISCGSAHT 1803
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 70/167 (41%), Gaps = 11/167 (6%)
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
+V+ WGL QLG G K P L + K +A G + +T+KG LY+
Sbjct: 559 DVFMWGLNDKDQLGGL---KGSKVKSPTLCDHLSSLQCKFIAGGSKSTFFITNKGKLYSC 615
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G S G+LG+G T + + S + L+V V G +H + DG
Sbjct: 616 GESSFGKLGIGDITGNVT-----SPRLVTGLNQLIVTKVS--VHSGGNHVMALTSDGLAF 668
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLAD 413
WG GQ + P ++ VG+ V ++ G HSA + +
Sbjct: 669 SWGDGENGQLGHGNLMSCSKPHLIEAFVGKIVTDISCGSAHSAAIVE 715
>gi|225438323|ref|XP_002273073.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
gi|296082630|emb|CBI21635.3| unnamed protein product [Vitis vinifera]
Length = 420
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/387 (28%), Positives = 167/387 (43%), Gaps = 47/387 (12%)
Query: 7 IGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLD 66
+G R + P K +WG G+ G E Q R P + C A + +
Sbjct: 19 LGFCRRLSSSEPRKRFAALWGNGDFGRLGLGSLESQWR------PAV--CSAFDHHSLVA 70
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEG-RKHPEKVKQLQSEFVKSISCGAHC 125
IACG HT + G ++ G N+FGQLG ++ P +V L + + I+ G +
Sbjct: 71 IACGGAHTLFLTESGCVYAAGLNDFGQLGVSVDKNYTTEPLEVSALPKKIIH-IAAGYYH 129
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNF---PRLFWGAFTPNTIIC-------QVSCG 175
+AAI E L++WG+N + P+ + C V+ G
Sbjct: 130 SAAITADGE---------LYMWGKNSNGQLGLGKKAANAVSVPSKVECLNGISIKMVALG 180
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
S H VA ++ G +WG G+LG G L R Y L E K+ V+
Sbjct: 181 SEHSVAATDQGEALSWGAGGSGRLGHGHESSLLGFFRTSSEYRPRLIRRLEGIKVKNVAA 240
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
G HSA + ENG V+ +G ++ + G + P + L + K VACGG H+
Sbjct: 241 GLLHSACIDENGSVFIFGERAMDKFG---FREAKNATAPSMISELP--YSKQVACGGYHT 295
Query: 296 CALTSKGALYAWGGSQAGQLGLG-PQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGH 354
C ++S G L+ WG ++ G LG+G +T F P + F P V V+CG
Sbjct: 296 CVISSSGELFTWGSNENGCLGMGFMETIHF---PERIEGPFSKNP-------VSQVSCGW 345
Query: 355 SHTLVYMRDGRIHGWGY-NSYGQAANE 380
HT + +G + WG+ SYG +++
Sbjct: 346 KHTAA-ISEGNVFTWGWGGSYGTFSDD 371
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 141/312 (45%), Gaps = 60/312 (19%)
Query: 17 IPAKSAIYVWGYNHSGQTGR-KGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTA 75
I A +Y+WG N +GQ G K + +P ++ C G + + +A G EH+
Sbjct: 133 ITADGELYMWGKNSNGQLGLGKKAANAVSVPSKVE-----CLNGISIKM--VALGSEHSV 185
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEG---------RKHPEKVKQLQSEFVKSISCGAHCT 126
A G +WGA G+LG G E P +++L+ VK+++ G +
Sbjct: 186 AATDQGEALSWGAGGSGRLGHGHESSLLGFFRTSSEYRPRLIRRLEGIKVKNVAAGLLHS 245
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFP-RLFWGAFTPNTII-----CQVSCGSVHVV 180
A I E +G++ +++G+ F R A P+ I QV+CG H
Sbjct: 246 ACIDE----NGSV-----FIFGERAMDKFGFREAKNATAPSMISELPYSKQVACGGYHTC 296
Query: 181 ALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKG-YAKFLDEAPELEKITQVSCGEYH 239
+S G L WG NE G LG G E + P I+G ++K ++QVSCG H
Sbjct: 297 VISSSGELFTWGSNENGCLGMGFM-ETIHFPERIEGPFSK--------NPVSQVSCGWKH 347
Query: 240 SAAVSENGEVYTWGLG------------SVGQLGHCSLQSGDKE-LLPRRVVALDGIFIK 286
+AA+SE G V+TWG G S GQLG Q D + + P+ V + +
Sbjct: 348 TAAISE-GNVFTWGWGGSYGTFSDDGHSSGGQLG----QGSDVDHIKPKMVEFEESVRAL 402
Query: 287 DVACGGVHSCAL 298
V+CG H+ A+
Sbjct: 403 QVSCGFNHTGAI 414
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 105/246 (42%), Gaps = 51/246 (20%)
Query: 26 WGYNHSGQTGRKGRERQL----RIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
WG SG+ G G E L R + P L G + ++A G H+A + +G
Sbjct: 196 WGAGGSGRLGH-GHESSLLGFFRTSSEYRPRLIRRLEGIKVK--NVAAGLLHSACIDENG 252
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
++F +G + G + P + +L + K ++CG + T I+ S+
Sbjct: 253 SVFIFGERAMDKFGFREAKNATAPSMISEL--PYSKQVACGGYHTCVIS---------SS 301
Query: 142 SRLWVWGQNQGS----------NFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
L+ WG N+ +FP G F+ N + QVSCG H A+SE G + W
Sbjct: 302 GELFTWGSNENGCLGMGFMETIHFPERIEGPFSKNPV-SQVSCGWKHTAAISE-GNVFTW 359
Query: 192 G------------YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
G ++ GQLG+G + ++ P+++ E E + QVSCG H
Sbjct: 360 GWGGSYGTFSDDGHSSGGQLGQGSDVDHIK-PKMV--------EFEESVRALQVSCGFNH 410
Query: 240 SAAVSE 245
+ A+ E
Sbjct: 411 TGAILE 416
>gi|21741206|emb|CAD41017.1| OSJNBb0086G13.15 [Oryza sativa Japonica Group]
Length = 256
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 111/212 (52%), Gaps = 21/212 (9%)
Query: 165 PNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
P + VS G+ H VAL +L +WG E GQLG G + L P V+ G F A
Sbjct: 20 PPPAVVLVSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLV-PTVLSG---FDAAA 75
Query: 225 PELEKITQVSCGEYHSAAVSEN-GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
P IT V CG H+ A SE+ +VY+WG G G+LGH + P+ V AL GI
Sbjct: 76 P---GITSVICGADHTTAYSEDEQQVYSWGWGDFGRLGH---GNSSDVFTPQPVKALQGI 129
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
IK +ACG H A+T G + +WG +Q GQLGLG T SL+P + + F +
Sbjct: 130 KIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLG--TTEDSLLPQKIQS-FEGVC---- 182
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
V+++A G HT DG ++GWG+ YG
Sbjct: 183 ---VKMIAAGAEHTAAVTEDGDLYGWGWGRYG 211
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 115/233 (49%), Gaps = 36/233 (15%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF--VKSISCGAH 124
++ G H+ A+ + L +WG E GQLG G E R P + + + S+ CGA
Sbjct: 27 VSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPGITSVICGAD 86
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVS 173
T A +E + W WG +F RL G FTP + I Q++
Sbjct: 87 HTTAYSEDEQQ------VYSWGWG-----DFGRLGHGNSSDVFTPQPVKALQGIKIKQIA 135
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
CG H +A++ G +Q+WG N+ GQLG G T + L P+ I+ + E + +
Sbjct: 136 CGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLL-PQKIQSF--------EGVCVKMI 186
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
+ G H+AAV+E+G++Y WG G G LG L + L+P +V +++ +F+K
Sbjct: 187 AAGAEHTAAVTEDGDLYGWGWGRYGNLG---LGDRNDRLVPEKVSSVENMFLK 236
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 84/194 (43%), Gaps = 26/194 (13%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A + + WG GQ G E +L +P L G A A + CG +HT A +
Sbjct: 39 AGNVLCSWGRGEDGQLGHGDAEDRL-----VPTVLSGFDAAAPGI-TSVICGADHTTAYS 92
Query: 79 SD-GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPREND 136
D +++WG +FG+LG G P+ VK LQ +K I+CG +HC A
Sbjct: 93 EDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGIKIKQIACGDSHCLAVTM------ 146
Query: 137 GTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTIIC--QVSCGSVHVVALSECGLL 188
+ WG+NQ G+ L +C ++ G+ H A++E G L
Sbjct: 147 ----AGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSFEGVCVKMIAAGAEHTAAVTEDGDL 202
Query: 189 QAWGYNEYGQLGRG 202
WG+ YG LG G
Sbjct: 203 YGWGWGRYGNLGLG 216
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 85/190 (44%), Gaps = 21/190 (11%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIF--I 285
+ VS G HS A+ + +WG G GQLGH GD E L+P + D I
Sbjct: 24 VVLVSAGASHSVALLAGNVLCSWGRGEDGQLGH-----GDAEDRLVPTVLSGFDAAAPGI 78
Query: 286 KDVACGGVHSCALT-SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP 344
V CG H+ A + + +Y+WG G+LG G + F+ P ++ + I I
Sbjct: 79 TSVICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKA---LQGIKI---- 131
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAA 403
+ +ACG SH L G + WG N GQ + + P + G V+ +AA
Sbjct: 132 ---KQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSFEGVCVKMIAA 188
Query: 404 GGGHSAVLAD 413
G H+A + +
Sbjct: 189 GAEHTAAVTE 198
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+ WG N +GQ G E L +P+++ C IA G EHTAAV DG
Sbjct: 150 VQSWGRNQNGQLGLGTTEDSL-LPQKIQSFEGVCVK-------MIAAGAEHTAAVTEDGD 201
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVK 117
L+ WG +G LG G R PEKV +++ F+K
Sbjct: 202 LYGWGWGRYGNLGLGDRNDRLVPEKVSSVENMFLK 236
>gi|432118039|gb|ELK37976.1| E3 ubiquitin-protein ligase HERC2 [Myotis davidii]
Length = 4285
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 134/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 2772 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 2823
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 2824 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 2876
Query: 143 RLWVWGQNQGSNFPRLFWGAF----TPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 2877 LVFSWGDG---DFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 2933
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV++ G+VY
Sbjct: 2934 GKGDYFRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDAGQVYA 2984
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 2985 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3030
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 2711 VTVEGKVYACGEATNGRLGLGMSSGTVPIPRQV-----TALSSYVVKKVAVHSGGRHATA 2765
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+
Sbjct: 2766 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------ 2819
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 2820 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 2873
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 2874 DEGLVFSWGDGDFGKLGRG-GSEGCNVPQNI--------ERLNGQGVCQIECGAQFSLAL 2924
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH S K P+ V L G I VA G +H A+T G
Sbjct: 2925 TKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDAGQ 2981
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 2982 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3028
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 159/365 (43%), Gaps = 59/365 (16%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSI---S 120
+ +A G + AV +G ++ G G+LG G G P +V L S VK + S
Sbjct: 2699 VQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTVPIPRQVTALSSYVVKKVAVHS 2758
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIIC 170
G H TA + +++ WG+ PRL T I
Sbjct: 2759 GGRHATALTVD----------GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IR 2806
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP--RVIKGYAKFLDEAPELE 228
++CGS H AL+ G L WG EYG+LG G L+ +V+ G+
Sbjct: 2807 DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH----------- 2855
Query: 229 KITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
++ QV+CG + + A+++ G V++WG G G+LG + + +P+ + L+G +
Sbjct: 2856 RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN---VPQNIERLNGQGVC 2912
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
+ CG S ALT G ++ WG +LG G SD + R ++ G
Sbjct: 2913 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRG 2960
Query: 347 VQLV--ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAA 403
++V A G H L G+++ WG N +GQ N +T P+ V G+ + ++A
Sbjct: 2961 KKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVAC 3020
Query: 404 GGGHS 408
G HS
Sbjct: 3021 GSSHS 3025
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 128/276 (46%), Gaps = 25/276 (9%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N + P+L G + N + H +AL+ G + +WG + G+LG G
Sbjct: 472 RVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG 531
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P+VI ++ + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 532 DTVP-LEEPKVISAFSG----KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 586
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + E +P V L G+ + DVACG A+T G +++WG G+LG G
Sbjct: 587 ---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQPLAVTDNGQVWSWGDGDYGKLGRGGS 643
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D V V CG ++ +DG+++ WG +
Sbjct: 644 DGCKTPKLIEKLQDL------------DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLG 691
Query: 379 NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ + YP ++ G +V +AAG H L +
Sbjct: 692 HGTEEHVRYPKLLEALQGKKVIDVAAGSTHCLALTE 727
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 106/210 (50%), Gaps = 21/210 (10%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ QV+ GS + A++ G + A G G+LG G++ + PR + + ++
Sbjct: 2698 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTVPIPRQVTALSSYV------V 2751
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
K V G H+ A++ +G+V++WG G G+LGH S + DK PR + AL I+D+
Sbjct: 2752 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDI 2808
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
ACG HS ALTS G LY WG + G+LG G T + + +L+ +Q
Sbjct: 2809 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK---------PKMVKVLLGHRVIQ 2859
Query: 349 LVACG--HSHTLVYMRDGRIHGWGYNSYGQ 376
VACG + TL +G + WG +G+
Sbjct: 2860 -VACGSRDAQTLALTDEGLVFSWGDGDFGK 2888
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 133/285 (46%), Gaps = 45/285 (15%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+L A N + H A+A+ G +++WG + G+LG G + P+ +
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVI 542
Query: 109 KQLQ----SEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT 164
+ V I+CG+ +AAI E L+ WG+ N+ RL G+
Sbjct: 543 SAFSGKQAGKHVVHIACGSTYSAAITAEGE---------LYTWGRG---NYGRLGHGSSE 590
Query: 165 PNTI-----------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
I + V+CGS +A+++ G + +WG +YG+LGRG +G + P
Sbjct: 591 DEAIPMLVAGLKGLKVIDVACGSGDAQPLAVTDNGQVWSWGDGDYGKLGRG-GSDGCKTP 649
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
++I+ + +V CG S A++++G+VY+WG G +LGH G +E
Sbjct: 650 KLIEKLQDL--------DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGH-----GTEE 696
Query: 272 LL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ P+ + AL G + DVA G H ALT +++WG + Q
Sbjct: 697 HVRYPKLLEALQGKKVIDVAAGSTHCLALTEDSEVHSWGNNDQCQ 741
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 134/293 (45%), Gaps = 33/293 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG G+ G G L PK + G AG + + IACG ++AA
Sbjct: 511 LAATGEVYSWGCGDGGRLGH-GDTVPLEEPKVIS-AFSGKQAGKHV--VHIACGSTYSAA 566
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E P V L+ V ++CG+ +A
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQPLA------ 620
Query: 137 GTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
++W WG R G TP I + +V CGS VAL++ G +
Sbjct: 621 -VTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQV 679
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG + +LG G T E ++ P+++ EA + +K+ V+ G H A++E+ E
Sbjct: 680 YSWGKGDNQRLGHG-TEEHVRYPKLL--------EALQGKKVIDVAAGSTHCLALTEDSE 730
Query: 249 VYTWGLGSVGQLGHCSLQSG-DKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
V++WG Q Q+ + LLP LD I +ACG S A +S
Sbjct: 731 VHSWGNNDQCQHFDTLHQTKPEPSLLP----GLDTKHIVGIACGPAQSFAWSS 779
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 122/283 (43%), Gaps = 30/283 (10%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G + +DIA G H+A V S G
Sbjct: 3739 VYSWGEAEDGKLGHGNRSPCDR------PRVVESLRG--TEVVDIAAGGAHSACVTSAGD 3790
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG E + P+ V+ LQ V ++CG+ + +D T+
Sbjct: 3791 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLC--LTDDDTV--- 3845
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGR 201
W WG R G P + + G S L G +Y +LG
Sbjct: 3846 --WSWGDGDYGKLGRGGSDGCKVPMKVPLSLRVGRPSTPPPS-WPRLDVGGKGDYHRLGH 3902
Query: 202 GITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG 261
G + + ++ PR ++G + +K+ ++ G H +E GEVYTWG GQLG
Sbjct: 3903 G-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEEGEVYTWGDNDEGQLG 3953
Query: 262 HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA-LTSKGA 303
+ + + PR V AL G + VACG H+ A TSK A
Sbjct: 3954 DGTTNAIQR---PRLVAALQGRKVNRVACGSAHTLAWSTSKPA 3993
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 28/212 (13%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ ++CGS + A++ G L WG YG+LG G + E P ++ G
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-SSEDEAIPMLVAGLKGL-------- 604
Query: 229 KITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
K+ V+CG + AV++NG+V++WG G G+LG D P+ + L + +
Sbjct: 605 KVIDVACGSGDAQPLAVTDNGQVWSWGDGDYGKLGR---GGSDGCKTPKLIEKLQDLDVV 661
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
V CG S ALT G +Y+WG +LG G ++ + R +L G
Sbjct: 662 KVRCGSQFSVALTKDGQVYSWGKGDNQRLGHG------------TEEHVRYPKLLEALQG 709
Query: 347 VQL--VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
++ VA G +H L D +H WG N Q
Sbjct: 710 KKVIDVAAGSTHCLALTEDSEVHSWGNNDQCQ 741
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 158/398 (39%), Gaps = 103/398 (25%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P C A A R + + G + AV +DG
Sbjct: 3633 IYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALATLRPVQLIGGEQTLFAVTADG 3683
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI---SCGAHCTAAIAEPRENDGT 138
L+ G G+LG G E P ++ +Q F++ + S G HC A +E
Sbjct: 3684 KLYATGYGAGGRLGVGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSE------- 3736
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG+ + PR+ T + ++ G H ++ G L
Sbjct: 3737 ---GEVYSWGEAEDGKLGHGNRSPCDRPRVVESLR--GTEVVDIAAGGAHSACVTSAGDL 3791
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSEN 246
WG YG+LG + + L+ P+++ EA + ++ V+C G+ + ++++
Sbjct: 3792 YTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVVDVACGSGDAQTLCLTDD 3842
Query: 247 GEVYTWGLGSVGQLGH-------------CSLQSG------------------------- 268
V++WG G G+LG SL+ G
Sbjct: 3843 DTVWSWGDGDYGKLGRGGSDGCKVPMKVPLSLRVGRPSTPPPSWPRLDVGGKGDYHRLGH 3902
Query: 269 ---DKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
D PR+V L G + +A G +H T +G +Y WG + GQLG G
Sbjct: 3903 GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEEGEVYTWGDNDEGQLGDG------- 3955
Query: 326 LIPNESDTYFRNIPILVVP---NGVQLVACGHSHTLVY 360
T P LV V VACG +HTL +
Sbjct: 3956 ------TTNAIQRPRLVAALQGRKVNRVACGSAHTLAW 3987
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 99/211 (46%), Gaps = 28/211 (13%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
Q+ G + A++ G L A GY G+LG G T E + P +++ + K+
Sbjct: 3668 QLIGGEQTLFAVTADGKLYATGYGAGGRLGVGGT-ESVSAPTLLESIQHVF-----IRKV 3721
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
V+ G H A+S GEVY+WG G+LGH + D+ PR V +L G + D+A
Sbjct: 3722 A-VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDR---PRVVESLRGTEVVDIAA 3777
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGV 347
GG HS +TS G LY WG + G+LG SD+ + P LV + V
Sbjct: 3778 GGAHSACVTSAGDLYTWGKGRYGRLG-------------HSDSEDQLKPKLVEALQGHRV 3824
Query: 348 QLVACG--HSHTLVYMRDGRIHGWGYNSYGQ 376
VACG + TL D + WG YG+
Sbjct: 3825 VDVACGSGDAQTLCLTDDDTVWSWGDGDYGK 3855
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 99/222 (44%), Gaps = 46/222 (20%)
Query: 166 NTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAP 225
N + Q++C + LS G + YN P++++G A +
Sbjct: 451 NLGVTQIACAEKRFLILSRNGRVYTQAYNS-----------DTLAPQLVQGLA-----SR 494
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI 283
+ KI S G +H A++ GEVY+WG G G+LGH GD L P+ + A G
Sbjct: 495 NIVKIAAHSDG-HHYLALAATGEVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGK 548
Query: 284 ----FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIP 339
+ +ACG +S A+T++G LY WG G+LG G + IP
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-------------SSEDEAIP 595
Query: 340 ILVV-PNGVQL--VAC--GHSHTLVYMRDGRIHGWGYNSYGQ 376
+LV G+++ VAC G + L +G++ WG YG+
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQPLAVTDNGQVWSWGDGDYGK 637
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 105/229 (45%), Gaps = 25/229 (10%)
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + WG+N GQLG GI ++ P + A + Q+ GE AV+
Sbjct: 3631 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATL--------RPVQLIGGEQTLFAVTA 3681
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHSCALTSKGA 303
+G++Y G G+ G+LG +S P + ++ +FI+ VA GG H AL+S+G
Sbjct: 3682 DGKLYATGYGAGGRLGVGGTESVSA---PTLLESIQHVFIRKVAVNSGGKHCLALSSEGE 3738
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 363
+Y+WG ++ G+LG G RS P ++ R ++ + A G +H+
Sbjct: 3739 VYSWGEAEDGKLGHG--NRSPCDRPRVVES-LRGTEVVDI-------AAGGAHSACVTSA 3788
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
G ++ WG YG+ + S P V+ G V +A G G + L
Sbjct: 3789 GDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTL 3837
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 74/186 (39%), Gaps = 22/186 (11%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+TQ++C E +S NG VYT S L P+ V L I +A
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------------DTLAPQLVQGLASRNIVKIA 500
Query: 290 C--GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
G H AL + G +Y+WG G+LG G +P E V
Sbjct: 501 AHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPLEEPKVISAFSGKQAGKHV 554
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGG 406
+ACG +++ +G ++ WG +YG+ + S P V G +V +A G G
Sbjct: 555 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSG 614
Query: 407 HSAVLA 412
+ LA
Sbjct: 615 DAQPLA 620
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 74/176 (42%), Gaps = 18/176 (10%)
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G +Y WG GQLG G K +P AL + + G A+T+ G LY
Sbjct: 3630 SGTIYGWGHNHRGQLGGIE---GAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLY 3686
Query: 306 AWGGSQAGQLGLGPQTRSFS---LIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
A G G+LG+G T S S L+ + + R + V G H L
Sbjct: 3687 ATGYGAGGRLGVG-GTESVSAPTLLESIQHVFIRKVA----------VNSGGKHCLALSS 3735
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
+G ++ WG G+ + + P V+ G EV +AAGG HSA + A L
Sbjct: 3736 EGEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGTEVVDIAAGGAHSACVTSAGDL 3791
>gi|302696855|ref|XP_003038106.1| hypothetical protein SCHCODRAFT_72210 [Schizophyllum commune H4-8]
gi|300111803|gb|EFJ03204.1| hypothetical protein SCHCODRAFT_72210, partial [Schizophyllum
commune H4-8]
Length = 418
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 158/352 (44%), Gaps = 54/352 (15%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEK------VKQLQS---EFVK 117
+A G H+ V GT++T G N+ LG T+ +PEK V +L S
Sbjct: 37 VASGGLHSVFVDERGTVWTCGVNDDAALGRVTQN-VPNPEKPNEFLDVDELTSYPHPIQS 95
Query: 118 SISCGAHCTAAIAEPRENDGTISTSRLWVWGQ---NQGS-NFPRLFWGAFTPNTI----- 168
+ G +A N L +WG N+GS F + F P +
Sbjct: 96 LVDEGFRAVKVVAGDSINAALSDAGELRLWGSFRANEGSLGFSKALKHQFNPVPVTMDLI 155
Query: 169 --------ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQ----GPRVIKG 216
I V+CG H++AL+ G + WG E QLGR + EG + PR IK
Sbjct: 156 NKPGDYEKIASVACGGNHILALTTYGNIFTWGAGEQCQLGRKV-LEGRKIDGTTPRKIKV 214
Query: 217 YAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE-LLPR 275
+ + AP L + G YHS AV+E G+VY WGL ++GQ G + D E +LP+
Sbjct: 215 GKR--NNAPVL-----IGAGMYHSFAVTEKGDVYGWGLNTMGQTGTGYYRPSDSEVVLPK 267
Query: 276 RVVA-----LDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNE 330
V+ LDG + + G H+ L S G ++A G S GQLGL +F +
Sbjct: 268 PVIGLHPDDLDGARVIKIVGGEHHTLFLISDGRVFACGRSNVGQLGLPDDHEAFQ---DR 324
Query: 331 SDTYFRNIPILV-VP-----NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
D+ F ++P+ V +P + V ++CG + RDG ++ WG + G+
Sbjct: 325 EDSDFVDVPVQVPMPDEHDDDPVVDISCGPHSNMAVTRDGALYSWGQGTQGE 376
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 131/335 (39%), Gaps = 84/335 (25%)
Query: 46 PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHP 105
P + +L P G + +ACG H A+ + G +FTWGA E QLG EGRK
Sbjct: 147 PVPVTMDLINKP-GDYEKIASVACGGNHILALTTYGNIFTWGAGEQCQLGRKVLEGRKI- 204
Query: 106 EKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTP 165
DGT + ++ V +N N P L
Sbjct: 205 ------------------------------DGT-TPRKIKVGKRN---NAPVL------- 223
Query: 166 NTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGI----TCEGLQGPRVIKGYAKFL 221
+ G H A++E G + WG N GQ G G E + VI + L
Sbjct: 224 ------IGAGMYHSFAVTEKGDVYGWGLNTMGQTGTGYYRPSDSEVVLPKPVIGLHPDDL 277
Query: 222 DEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG----HCSLQS---GDKELLP 274
D A ++ ++ GE+H+ + +G V+ G +VGQLG H + Q D +P
Sbjct: 278 DGA----RVIKIVGGEHHTLFLISDGRVFACGRSNVGQLGLPDDHEAFQDREDSDFVDVP 333
Query: 275 RRVVALD---GIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNES 331
+V D + D++CG + A+T GALY+WG G+LG+
Sbjct: 334 VQVPMPDEHDDDPVVDISCGPHSNMAVTRDGALYSWGQGTQGELGV-------------P 380
Query: 332 DTYFRNIPILVVPNG----VQLVACGHSHTLVYMR 362
D R +V G VACG HT+ R
Sbjct: 381 DVEVRTPRQIVRREGGSWAAVTVACGGQHTIGLFR 415
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 77/195 (39%), Gaps = 44/195 (22%)
Query: 17 IPAKSAIYVWGYNHSGQTGR---KGRERQLRIPKQL----PPELFGCPAGANSRWLDIAC 69
+ K +Y WG N GQTG + + ++ +PK + P +L G +R + I
Sbjct: 234 VTEKGDVYGWGLNTMGQTGTGYYRPSDSEVVLPKPVIGLHPDDLDG------ARVIKIVG 287
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLG--DGTE--EGRKHPEKV---------KQLQSEFV 116
G HT + SDG +F G + GQLG D E + R+ + V + + V
Sbjct: 288 GEHHTLFLISDGRVFACGRSNVGQLGLPDDHEAFQDREDSDFVDVPVQVPMPDEHDDDPV 347
Query: 117 KSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTII------- 169
ISCG H A+ DG L+ WGQ TP I+
Sbjct: 348 VDISCGPHSNMAVTR----DGA-----LYSWGQGTQGELGVPDVEVRTPRQIVRREGGSW 398
Query: 170 --CQVSCGSVHVVAL 182
V+CG H + L
Sbjct: 399 AAVTVACGGQHTIGL 413
Score = 38.5 bits (88), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 60/158 (37%), Gaps = 21/158 (13%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKEL------------LPRRV 277
I V+ G HS V E G V+T G+ LG + + E P +
Sbjct: 34 IESVASGGLHSVFVDERGTVWTCGVNDDAALGRVTQNVPNPEKPNEFLDVDELTSYPHPI 93
Query: 278 VAL--DGIFIKDVACGGVHSCALTSKGALYAWGGSQA--GQLGLGPQTR-SFSLIPNESD 332
+L +G V G + AL+ G L WG +A G LG + F+ +P D
Sbjct: 94 QSLVDEGFRAVKVVAGDSINAALSDAGELRLWGSFRANEGSLGFSKALKHQFNPVPVTMD 153
Query: 333 TYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWG 370
N P + VACG +H L G I WG
Sbjct: 154 LI--NKPGDY--EKIASVACGGNHILALTTYGNIFTWG 187
>gi|297296624|ref|XP_002804832.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Macaca
mulatta]
Length = 4824
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 173/382 (45%), Gaps = 79/382 (20%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI--- 139
++ WGA GQL E GR + + CG +CT I + +GT+
Sbjct: 3962 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVI----QANGTVLAC 4014
Query: 140 ---STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQV--SCGSV-HVVALSECGLLQAWGY 193
S RL GQ + L + ++ Q+ SCGS H +AL+E G + +WG
Sbjct: 4015 GEGSYGRL---GQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4071
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
+YG+LG G + + PR I EA + E++ Q+SCG HSA V+ +G+++T+G
Sbjct: 4072 GDYGKLGHG-NSDRQRRPRQI--------EALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4122
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL-YAWGGSQA 312
G G+LG L + + LP RV AL+G I VACG H+ A+++ G++ +A+G
Sbjct: 4123 NGDYGRLG---LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4179
Query: 313 GQLGLGPQTRSFSLIPNESDTY--------------------------FRNIPILVVPNG 346
G+LGLG T S P + D F ++ +P G
Sbjct: 4180 GKLGLGNSTAKSS--PQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4237
Query: 347 ------------------VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYP 388
++ VA G HTL +G ++ WG NS GQ + + P
Sbjct: 4238 RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP 4297
Query: 389 SPVDWCVGE-VRKLAAGGGHSA 409
+ V G+ VR+++AG HSA
Sbjct: 4298 TLVTGLQGKNVRQISAGRCHSA 4319
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 180/405 (44%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ P+L P+ ++++ I G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQ------PKL--APSFSDAQ--TIEAGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA----HCTAAIAEPRENDGT 138
+ G +G+LG G + +K+ +K +S H A E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE------- 476
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG + +P+L G ++C VS G H A++E G L
Sbjct: 477 ---GEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGEL 532
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G P ++K ++ + +VSCG H+ A+S++G
Sbjct: 533 YTWGEGDFGRLGHG-DSNSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 581
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ + AL G+FI+ V G S ALTS G +Y
Sbjct: 582 TVWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVY 636
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V V+ G SH L D
Sbjct: 637 AWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-VSIGDSHCLALSHDNE 685
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 166/377 (44%), Gaps = 85/377 (22%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPP-------- 51
MD + T+RP D ++ K +Y+WG GQ GR + +P P
Sbjct: 3939 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMVPAAAPSFSQAQQVI 3996
Query: 52 -------------ELFGCPAGANSRW------------------------LDIACGHE-H 73
+ C G+ R L +CG + H
Sbjct: 3997 CGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGH 4056
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
+ A+ G +F+WG ++G+LG G + ++ P +++ LQ E V +SCG +A +
Sbjct: 4057 SMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT--- 4113
Query: 134 ENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-----------ICQVSCGSVHVVAL 182
+DG +L+ +G ++ RL G + + I QV+CG H +A+
Sbjct: 4114 -SDG-----KLFTFGNG---DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV 4164
Query: 183 SECG-LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
S G ++ A+G +YG+LG G P+ I I +V+CG S
Sbjct: 4165 SADGSMVWAFGDGDYGKLGLG-NSTAKSSPQKIDVLCGI--------GIKKVACGTQFSV 4215
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A++++G VYT+G + L ++ ++ P+++ L G+ I+DVA G H+ AL S
Sbjct: 4216 ALTKDGHVYTFGQDRLIGLPEGRARNHNR---PQQIPVLAGMIIEDVAVGAEHTLALASN 4272
Query: 302 GALYAWGGSQAGQLGLG 318
G +YAWG + GQLGLG
Sbjct: 4273 GDVYAWGSNSEGQLGLG 4289
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 143/307 (46%), Gaps = 43/307 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V SDG
Sbjct: 4066 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTSDGK 4117
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG++
Sbjct: 4118 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA----DGSM--- 4170
Query: 143 RLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T P I I +V+CG+ VAL++ G + +
Sbjct: 4171 -VWAFGDG---DYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4226
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ I A + I V+ G H+ A++ NG+VY
Sbjct: 4227 GQDRLIGLPEG-RARNHNRPQQIPVLAGMI--------IEDVAVGAEHTLALASNGDVYA 4277
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWGGS 310
WG S GQLG L + P V L G ++ ++ G HS A T+ A G S
Sbjct: 4278 WGSNSEGQLG---LGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVS 4334
Query: 311 QAGQLGL 317
QLGL
Sbjct: 4335 VPLQLGL 4341
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P I I +V GS +AL+ G + AW
Sbjct: 583 -VWSFG---GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I VS G+ H A+S + EVY
Sbjct: 639 GCG--ACLGCGSSEATALRPKLIEELAA--------TRIVDVSIGDSHCLALSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDGI I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 30/228 (13%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +GQL G V+ A AP + QV CG+ + + NG V
Sbjct: 3965 WGAGRHGQLAEA-------GRNVMVPAA-----APSFSQAQQVICGQNCTFVIQANGTVL 4012
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGALYAW 307
G GS G+LG + S D +L + AL G + + +CG HS ALT G +++W
Sbjct: 4013 ACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSW 4069
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G R R I L VQ+ +CG H+ V DG++
Sbjct: 4070 GDGDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLF 4119
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
+G YG+ ++ P V G ++ ++A G H+ AV AD
Sbjct: 4120 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 4167
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VSE EVY WG S QL G +E + + +A + + G + +++ G
Sbjct: 368 VSETCEVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ A G G+LGLG +L + + R+I + G HTL +
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RSIKKVSSSKG------SDGHTLAFTT 475
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+G + WG YG+ + S+ YP + + G+V ++AG HSA + +
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
>gi|383422563|gb|AFH34495.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4846
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 173/382 (45%), Gaps = 79/382 (20%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI--- 139
++ WGA GQL E GR + + CG +CT I + +GT+
Sbjct: 3984 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVI----QANGTVLAC 4036
Query: 140 ---STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQV--SCGSV-HVVALSECGLLQAWGY 193
S RL GQ + L + ++ Q+ SCGS H +AL+E G + +WG
Sbjct: 4037 GEGSYGRL---GQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4093
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
+YG+LG G + + PR I EA + E++ Q+SCG HSA V+ +G+++T+G
Sbjct: 4094 GDYGKLGHG-NSDRQRRPRQI--------EALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4144
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL-YAWGGSQA 312
G G+LG L + + LP RV AL+G I VACG H+ A+++ G++ +A+G
Sbjct: 4145 NGDYGRLG---LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4201
Query: 313 GQLGLGPQTRSFSLIPNESDTY--------------------------FRNIPILVVPNG 346
G+LGLG T S P + D F ++ +P G
Sbjct: 4202 GKLGLGNSTAKSS--PQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4259
Query: 347 ------------------VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYP 388
++ VA G HTL +G ++ WG NS GQ + + P
Sbjct: 4260 RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP 4319
Query: 389 SPVDWCVGE-VRKLAAGGGHSA 409
+ V G+ VR+++AG HSA
Sbjct: 4320 TLVTGLQGKNVRQISAGRCHSA 4341
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 182/405 (44%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ PK P + S I G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQ-PKLAP---------SFSDAQTIEAGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG----T 138
+ G +G+LG G + +K+L E +SI ++ + +DG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQS---TLKKLTFEPHRSIK-------KVSSSKGSDGHTLAF 473
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ ++ WG + +P+L G ++C VS G H A++E G L
Sbjct: 474 TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGEL 532
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G + P ++K ++ + +VSCG H+ A+S++G
Sbjct: 533 YTWGEGDFGRLGHGDS-NSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 581
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ + AL G+FI+ V G S ALTS G +Y
Sbjct: 582 TVWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVY 636
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V V+ G SH L D
Sbjct: 637 AWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-VSIGDSHCLALSHDNE 685
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 166/377 (44%), Gaps = 85/377 (22%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPP-------- 51
MD + T+RP D ++ K +Y+WG GQ GR + +P P
Sbjct: 3961 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMVPAAAPSFSQAQQVI 4018
Query: 52 -------------ELFGCPAGANSRW------------------------LDIACGHE-H 73
+ C G+ R L +CG + H
Sbjct: 4019 CGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGH 4078
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
+ A+ G +F+WG ++G+LG G + ++ P +++ LQ E V +SCG +A +
Sbjct: 4079 SMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT--- 4135
Query: 134 ENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-----------ICQVSCGSVHVVAL 182
+DG +L+ +G ++ RL G + + I QV+CG H +A+
Sbjct: 4136 -SDG-----KLFTFGNG---DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV 4186
Query: 183 SECG-LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
S G ++ A+G +YG+LG G P+ I I +V+CG S
Sbjct: 4187 SADGSMVWAFGDGDYGKLGLG-NSTAKSSPQKIDVLCGI--------GIKKVACGTQFSV 4237
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A++++G VYT+G + L ++ ++ P+++ L G+ I+DVA G H+ AL S
Sbjct: 4238 ALTKDGHVYTFGQDRLIGLPEGRARNHNR---PQQIPVLAGMIIEDVAVGAEHTLALASN 4294
Query: 302 GALYAWGGSQAGQLGLG 318
G +YAWG + GQLGLG
Sbjct: 4295 GDVYAWGSNSEGQLGLG 4311
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 143/307 (46%), Gaps = 43/307 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V SDG
Sbjct: 4088 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTSDGK 4139
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG++
Sbjct: 4140 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA----DGSM--- 4192
Query: 143 RLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T P I I +V+CG+ VAL++ G + +
Sbjct: 4193 -VWAFGDG---DYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4248
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ I A + I V+ G H+ A++ NG+VY
Sbjct: 4249 GQDRLIGLPEG-RARNHNRPQQIPVLAGMI--------IEDVAVGAEHTLALASNGDVYA 4299
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWGGS 310
WG S GQLG L + P V L G ++ ++ G HS A T+ A G S
Sbjct: 4300 WGSNSEGQLG---LGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVS 4356
Query: 311 QAGQLGL 317
QLGL
Sbjct: 4357 VPLQLGL 4363
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P I I +V GS +AL+ G + AW
Sbjct: 583 -VWSFG---GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I VS G+ H A+S + EVY
Sbjct: 639 GCG--ACLGCGSSEATALRPKLIEELAA--------TRIVDVSIGDSHCLALSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDGI I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 30/228 (13%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +GQL G V+ A AP + QV CG+ + + NG V
Sbjct: 3987 WGAGRHGQLAEA-------GRNVMVPAA-----APSFSQAQQVICGQNCTFVIQANGTVL 4034
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGALYAW 307
G GS G+LG + S D +L + AL G + + +CG HS ALT G +++W
Sbjct: 4035 ACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSW 4091
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G R R I L VQ+ +CG H+ V DG++
Sbjct: 4092 GDGDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLF 4141
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
+G YG+ ++ P V G ++ ++A G H+ AV AD
Sbjct: 4142 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 4189
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VSE EVY WG S QL G +E + + +A + + G + +++ G
Sbjct: 368 VSETCEVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ A G G+LGLG +L + + R+I + G HTL +
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RSIKKVSSSKG------SDGHTLAFTT 475
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+G + WG YG+ + S+ YP + + G+V ++AG HSA + +
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
>gi|410920940|ref|XP_003973941.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Takifugu rubripes]
Length = 4822
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 164/357 (45%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + IY G +G+ G + IP+Q+ + + + + G H A
Sbjct: 2993 VTVEGKIYACGEATNGRLGLGLSSGTIPIPRQI-----TALSNYVVKKVAVHSGGRHAMA 3047
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AAI
Sbjct: 3048 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT------ 3101
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G P + + QV+CGS +AL+
Sbjct: 3102 ---SSGELYSWGLGE---YGRLGHGDNATQLRPKLVKVLLGHRVIQVACGSRDAQTLALT 3155
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 3156 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 3206
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH + K P+ V L G I VA G +H A+T G
Sbjct: 3207 TKSGVVWTWGKGDYFRLGHGTDVHVRK---PQMVEGLRGKKIVHVAVGALHCLAVTDTGQ 3263
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 3264 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3310
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 134/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3054 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAAITSSGE 3105
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L++WG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 3106 LYSWGLGEYGRLGHGDNATQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEG------- 3158
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 3159 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3215
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P++++G +KI V+ G H AV++ G+VY
Sbjct: 3216 GKGDYFRLGHGTDVH-VRKPQMVEGLRG--------KKIVHVAVGALHCLAVTDTGQVYA 3266
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3267 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3312
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 176/411 (42%), Gaps = 67/411 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
++ ++VWG N Q G L+ K P + N + +A G + AV
Sbjct: 2944 RTKVFVWGLNDKDQLG------GLKGSKIKVPSFSETLSALNV--VQVAGGSKSLFAVTV 2995
Query: 80 DGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPREN 135
+G ++ G G+LG G G P ++ L + VK ++ G H A
Sbjct: 2996 EGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTV----- 3050
Query: 136 DGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
DG +++ WG+ PRL T I ++CGS H A++
Sbjct: 3051 DG-----KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAAITSS 3103
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGP--RVIKGYAKFLDEAPELEKITQVSCG--EYHSA 241
G L +WG EYG+LG G L+ +V+ G+ ++ QV+CG + +
Sbjct: 3104 GELYSWGLGEYGRLGHGDNATQLRPKLVKVLLGH-----------RVIQVACGSRDAQTL 3152
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A+++ G V++WG G G+LG + + +P+ + L+G + + CG S ALT
Sbjct: 3153 ALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTKS 3209
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLV 359
G ++ WG +LG G +D + R ++ G ++V A G H L
Sbjct: 3210 GVVWTWGKGDYFRLGHG------------TDVHVRKPQMVEGLRGKKIVHVAVGALHCLA 3257
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
G+++ WG N +GQ N +T P+ V G+ + ++A G HS
Sbjct: 3258 VTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3308
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 127/283 (44%), Gaps = 35/283 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +DIA G H+A + + G
Sbjct: 4048 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRGVEV--VDIAAGGAHSACITASGE 4099
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFTWG +G+LG G E + P+ V LQ V ++CG+ + ++
Sbjct: 4100 LFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDD------- 4152
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
+W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 4153 MVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGVTKVECGSQFSVALTKSGAVYTWGKG 4212
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 4213 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4263
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
GQLG + + + PR V AL G I VACG H+ A
Sbjct: 4264 NDEGQLGDGTTNAIQR---PRLVAALQGKKINRVACGSAHTLA 4303
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 140/314 (44%), Gaps = 53/314 (16%)
Query: 63 RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG 122
R + + G +H A++S+G +++WG E G+LG G P ++ L+ V I+ G
Sbjct: 4028 RKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAG 4087
Query: 123 AHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQ 171
+A I ++ L+ WG+ + + RL G P + +
Sbjct: 4088 GAHSACIT---------ASGELFTWGKGR---YGRLGHGDSEDQLKPKLVDALQGHRVID 4135
Query: 172 VSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK 229
V+CGS + L++ ++ +WG +YG+LGRG +G + P I
Sbjct: 4136 VACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG-GSDGCKIPMKIDSLTGL--------G 4186
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+T+V CG S A++++G VYTWG G +LGH S D PR+V L G + +A
Sbjct: 4187 VTKVECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIA 4243
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NG 346
G +H T G +Y WG + GQLG G T P LV
Sbjct: 4244 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKK 4290
Query: 347 VQLVACGHSHTLVY 360
+ VACG +HTL +
Sbjct: 4291 INRVACGSAHTLAW 4304
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 176/412 (42%), Gaps = 76/412 (18%)
Query: 22 AIYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
IY WG+NH GQ G G E ++++P P E A A R + + G + AV +D
Sbjct: 3941 TIYGWGHNHRGQLG--GIEGAKVKVPT--PTE-----ALATLRPVQLIGGEQTLFAVTAD 3991
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDG 137
G L+ G G+LG G E P ++ +Q F++ ++ G HC A +E
Sbjct: 3992 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSE------ 4045
Query: 138 TISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
++ WG+ + PR+ + ++ G H ++ G
Sbjct: 4046 ----GEVYSWGEAEDGKLGHGNRSPCDRPRVIES--LRGVEVVDIAAGGAHSACITASGE 4099
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAAVSE 245
L WG YG+LG G + + L+ P+++ +A + ++ V+CG + + +++
Sbjct: 4100 LFTWGKGRYGRLGHGDSEDQLK-PKLV--------DALQGHRVIDVACGSGDAQTLCLTD 4150
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+ V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4151 DDMVWSWGDGDYGKLGR---GGSDGCKIPMKIDSLTGLGVTKVECGSQFSVALTKSGAVY 4207
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHT 357
WG +LG G SD + R P VQ +A G H
Sbjct: 4208 TWGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHC 4249
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
+ DG ++ WG N GQ + + P V G ++ ++A G H+
Sbjct: 4250 VCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 4301
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 30/253 (11%)
Query: 134 ENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
E+ GTI T +++VWG N +GS + + QV+ GS + A++
Sbjct: 2938 ESAGTIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2996
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + A G G+LG G++ + PR I + ++ K V G H+ A++
Sbjct: 2997 GKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYV------VKKVAVHSGGRHAMALTV 3050
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS A+TS G LY
Sbjct: 3051 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAAITSSGELY 3107
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRD 363
+WG + G+LG G N + + + +L+ +Q VACG + TL +
Sbjct: 3108 SWGLGEYGRLGHG---------DNATQLRPKLVKVLLGHRVIQ-VACGSRDAQTLALTDE 3157
Query: 364 GRIHGWGYNSYGQ 376
G + WG +G+
Sbjct: 3158 GLVFSWGDGDFGK 3170
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 127/260 (48%), Gaps = 41/260 (15%)
Query: 72 EHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQ----SEFVKSISCGAHCTA 127
+H A++S+G +F+WG + G+LG G + P + + V I+CG+ +A
Sbjct: 491 QHYLALSSNGEVFSWGCGDGGRLGHGDATYLEEPTMIAAFNGKQAGKHVVHIACGSTYSA 550
Query: 128 AIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGA----FTPNTI-------ICQVSCGS 176
I DG L+ WG+ N+ RL G+ TP + + V+CGS
Sbjct: 551 VIT----IDG-----ELYTWGRG---NYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGS 598
Query: 177 --VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
+A++E G + +WG +YG+LGRG +G + P++++ I +V
Sbjct: 599 GDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLVEKLQDL--------DIVKVC 649
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVH 294
CG S A++++G+VYTWG G +LGH + + P+ + L G + DVA G H
Sbjct: 650 CGSQFSVALTKDGQVYTWGKGDNQRLGH---GTDEHVRFPKLLDTLQGKKVVDVAVGSTH 706
Query: 295 SCALTSKGALYAWGGSQAGQ 314
ALT G +++WG + Q
Sbjct: 707 CLALTDDGEVHSWGSNDKLQ 726
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 114/241 (47%), Gaps = 25/241 (10%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H +ALS G + +WG + G+LG G L+ P +I + + + + ++CG
Sbjct: 492 HYLALSSNGEVFSWGCGDGGRLGHG-DATYLEEPTMIAAF----NGKQAGKHVVHIACGS 546
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG--VHS 295
+SA ++ +GE+YTWG G+ G+LGH S + + P V AL G+ + DVACG +
Sbjct: 547 TYSAVITIDGELYTWGRGNYGRLGH---GSSEDQTTPMLVTALKGLKVVDVACGSGDAQT 603
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQT--RSFSLIPNESDTYFRNIPILVVPNGVQLVACG 353
A+T G +++WG G+LG G ++ L+ D + V CG
Sbjct: 604 LAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDL------------DIVKVCCG 651
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLA 412
++ +DG+++ WG + + + +P +D G +V +A G H L
Sbjct: 652 SQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALT 711
Query: 413 D 413
D
Sbjct: 712 D 712
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 139/340 (40%), Gaps = 30/340 (8%)
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEP 132
T + GT++ WG N GQLG K P + L + V+ I A A+
Sbjct: 3933 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADG 3992
Query: 133 RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
+ G + + P L V+ G H +ALS G + +WG
Sbjct: 3993 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWG 4052
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
E G+LG G PRVI+ ++ ++ G HSA ++ +GE++TW
Sbjct: 4053 EAEDGKLGHG-NRSPCDRPRVIESLRGV--------EVVDIAAGGAHSACITASGELFTW 4103
Query: 253 GLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWG 308
G G G+LGH GD E L P+ V AL G + DVACG + LT +++WG
Sbjct: 4104 GKGRYGRLGH-----GDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWG 4158
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHG 368
G+LG G IP + D+ + GV V CG ++ + G ++
Sbjct: 4159 DGDYGKLGRG--GSDGCKIPMKIDS--------LTGLGVTKVECGSQFSVALTKSGAVYT 4208
Query: 369 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGH 407
WG Y + + + P V G +V +A G H
Sbjct: 4209 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4248
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 132/288 (45%), Gaps = 38/288 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G G L P + G AG + + IACG ++A + DG
Sbjct: 502 VFSWGCGDGGRLGH-GDATYLEEPTMIA-AFNGKQAGKHV--VHIACGSTYSAVITIDGE 557
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG G+ E + P V L+ V ++CG+ +A
Sbjct: 558 LYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLA-------VTENG 610
Query: 143 RLWVWGQ----------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
++W WG + G P+L + I +V CGS VAL++ G + WG
Sbjct: 611 QVWSWGDGDYGKLGRGGSDGCKTPKLV--EKLQDLDIVKVCCGSQFSVALTKDGQVYTWG 668
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
+ +LG G T E ++ P+++ + + +K+ V+ G H A++++GEV++W
Sbjct: 669 KGDNQRLGHG-TDEHVRFPKLL--------DTLQGKKVVDVAVGSTHCLALTDDGEVHSW 719
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
GS +L H S K+ P+ + L I ++CG S A +S
Sbjct: 720 --GSNDKLQHFDTLSNKKQ--PKALPGLKHIV--GISCGPGQSFAWSS 761
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 110/247 (44%), Gaps = 23/247 (9%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
Q+ G + A++ G L A GY G+LG G T E + P +++ + K+
Sbjct: 3977 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGT-ESVSTPTLLESIQHVF-----IRKV 4030
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
V+ G H A+S GEVY+WG G+LGH + D+ PR + +L G+ + D+A
Sbjct: 4031 A-VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGVEVVDIAA 4086
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
GG HS +T+ G L+ WG + G+LG G + D + + + V V
Sbjct: 4087 GGAHSACITASGELFTWGKGRYGRLGHG----------DSEDQLKPKLVDALQGHRVIDV 4136
Query: 351 AC--GHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGH 407
AC G + TL D + WG YG+ S P +D G V K+ G
Sbjct: 4137 ACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGVTKVECGSQF 4196
Query: 408 SAVLADA 414
S L +
Sbjct: 4197 SVALTKS 4203
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 78/192 (40%), Gaps = 34/192 (17%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+TQ+ C E +S +G VYT S L P + +L I +A
Sbjct: 439 VTQIVCSEKGFLILSSSGAVYTQNYKST-------------TLAPMLIHSLSSRKIVKLA 485
Query: 290 C--GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
G H AL+S G +++WG G+LG G TY ++ NG
Sbjct: 486 AHPDGQHYLALSSNGEVFSWGCGDGGRLGHG------------DATYLEEPTMIAAFNGK 533
Query: 348 QL------VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRK 400
Q +ACG +++ V DG ++ WG +YG+ + S P V G +V
Sbjct: 534 QAGKHVVHIACGSTYSAVITIDGELYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVD 593
Query: 401 LAAGGGHSAVLA 412
+A G G + LA
Sbjct: 594 VACGSGDAQTLA 605
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 83/193 (43%), Gaps = 36/193 (18%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ GR G + +IP ++ L G + CG + + A+ G
Sbjct: 4154 VWSWGDGDYGKLGRGGSD-GCKIPMKID-SLTGLGVTK------VECGSQFSVALTKSGA 4205
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIST 141
++TWG ++ +LG G+++ + P +V+ LQ + V +I+ G+ HC DG +
Sbjct: 4206 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT-----EDGEV-- 4258
Query: 142 SRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALS-----ECG 186
+ WG N PRL A I +V+CGS H +A S G
Sbjct: 4259 ---YTWGDNDEGQLGDGTTNAIQRPRLV--AALQGKKINRVACGSAHTLAWSTSKPTNAG 4313
Query: 187 LLQAWGYNEYGQL 199
L A EY L
Sbjct: 4314 KLPAQVPMEYNHL 4326
>gi|380817672|gb|AFE80710.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4854
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 173/382 (45%), Gaps = 79/382 (20%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI--- 139
++ WGA GQL E GR + + CG +CT I + +GT+
Sbjct: 3992 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVI----QANGTVLAC 4044
Query: 140 ---STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQV--SCGSV-HVVALSECGLLQAWGY 193
S RL GQ + L + ++ Q+ SCGS H +AL+E G + +WG
Sbjct: 4045 GEGSYGRL---GQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4101
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
+YG+LG G + + PR I EA + E++ Q+SCG HSA V+ +G+++T+G
Sbjct: 4102 GDYGKLGHG-NSDRQRRPRQI--------EALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4152
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL-YAWGGSQA 312
G G+LG L + + LP RV AL+G I VACG H+ A+++ G++ +A+G
Sbjct: 4153 NGDYGRLG---LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4209
Query: 313 GQLGLGPQTRSFSLIPNESDTY--------------------------FRNIPILVVPNG 346
G+LGLG T S P + D F ++ +P G
Sbjct: 4210 GKLGLGNSTAKSS--PQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4267
Query: 347 ------------------VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYP 388
++ VA G HTL +G ++ WG NS GQ + + P
Sbjct: 4268 RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP 4327
Query: 389 SPVDWCVGE-VRKLAAGGGHSA 409
+ V G+ VR+++AG HSA
Sbjct: 4328 TLVTGLQGKNVRQISAGRCHSA 4349
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 182/405 (44%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ PK P + S I G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQ-PKLAP---------SFSDAQTIEAGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG----T 138
+ G +G+LG G + +K+L E +SI ++ + +DG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQS---TLKKLTFEPHRSIK-------KVSSSKGSDGHTLAF 473
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ ++ WG + +P+L G ++C VS G H A++E G L
Sbjct: 474 TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGEL 532
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G + P ++K ++ + +VSCG H+ A+S++G
Sbjct: 533 YTWGEGDFGRLGHGDS-NSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 581
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ + AL G+FI+ V G S ALTS G +Y
Sbjct: 582 TVWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVY 636
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V V+ G SH L D
Sbjct: 637 AWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-VSIGDSHCLALSHDNE 685
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 166/377 (44%), Gaps = 85/377 (22%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPP-------- 51
MD + T+RP D ++ K +Y+WG GQ GR + +P P
Sbjct: 3969 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMVPAAAPSFSQAQQVI 4026
Query: 52 -------------ELFGCPAGANSRW------------------------LDIACGHE-H 73
+ C G+ R L +CG + H
Sbjct: 4027 CGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGH 4086
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
+ A+ G +F+WG ++G+LG G + ++ P +++ LQ E V +SCG +A +
Sbjct: 4087 SMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT--- 4143
Query: 134 ENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-----------ICQVSCGSVHVVAL 182
+DG +L+ +G ++ RL G + + I QV+CG H +A+
Sbjct: 4144 -SDG-----KLFTFGNG---DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV 4194
Query: 183 SECG-LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
S G ++ A+G +YG+LG G P+ I I +V+CG S
Sbjct: 4195 SADGSMVWAFGDGDYGKLGLG-NSTAKSSPQKIDVLCGI--------GIKKVACGTQFSV 4245
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A++++G VYT+G + L ++ ++ P+++ L G+ I+DVA G H+ AL S
Sbjct: 4246 ALTKDGHVYTFGQDRLIGLPEGRARNHNR---PQQIPVLAGMIIEDVAVGAEHTLALASN 4302
Query: 302 GALYAWGGSQAGQLGLG 318
G +YAWG + GQLGLG
Sbjct: 4303 GDVYAWGSNSEGQLGLG 4319
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 143/307 (46%), Gaps = 43/307 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V SDG
Sbjct: 4096 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTSDGK 4147
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG++
Sbjct: 4148 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA----DGSM--- 4200
Query: 143 RLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T P I I +V+CG+ VAL++ G + +
Sbjct: 4201 -VWAFGDG---DYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4256
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ I A + I V+ G H+ A++ NG+VY
Sbjct: 4257 GQDRLIGLPEG-RARNHNRPQQIPVLAGMI--------IEDVAVGAEHTLALASNGDVYA 4307
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWGGS 310
WG S GQLG L + P V L G ++ ++ G HS A T+ A G S
Sbjct: 4308 WGSNSEGQLG---LGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVS 4364
Query: 311 QAGQLGL 317
QLGL
Sbjct: 4365 VPLQLGL 4371
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P I I +V GS +AL+ G + AW
Sbjct: 583 -VWSFG---GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I VS G+ H A+S + EVY
Sbjct: 639 GCG--ACLGCGSSEATALRPKLIEELAA--------TRIVDVSIGDSHCLALSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDGI I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 30/228 (13%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +GQL G V+ A AP + QV CG+ + + NG V
Sbjct: 3995 WGAGRHGQLAEA-------GRNVMVPAA-----APSFSQAQQVICGQNCTFVIQANGTVL 4042
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGALYAW 307
G GS G+LG + S D +L + AL G + + +CG HS ALT G +++W
Sbjct: 4043 ACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSW 4099
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G R R I L VQ+ +CG H+ V DG++
Sbjct: 4100 GDGDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLF 4149
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
+G YG+ ++ P V G ++ ++A G H+ AV AD
Sbjct: 4150 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 4197
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VSE EVY WG S QL G +E + + +A + + G + +++ G
Sbjct: 368 VSETCEVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ A G G+LGLG +L + + R+I + G HTL +
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RSIKKVSSSKG------SDGHTLAFTT 475
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+G + WG YG+ + S+ YP + + G+V ++AG HSA + +
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
>gi|380788265|gb|AFE66008.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4861
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 173/382 (45%), Gaps = 79/382 (20%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI--- 139
++ WGA GQL E GR + + CG +CT I + +GT+
Sbjct: 3999 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVI----QANGTVLAC 4051
Query: 140 ---STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQV--SCGSV-HVVALSECGLLQAWGY 193
S RL GQ + L + ++ Q+ SCGS H +AL+E G + +WG
Sbjct: 4052 GEGSYGRL---GQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
+YG+LG G + + PR I EA + E++ Q+SCG HSA V+ +G+++T+G
Sbjct: 4109 GDYGKLGHG-NSDRQRRPRQI--------EALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4159
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL-YAWGGSQA 312
G G+LG L + + LP RV AL+G I VACG H+ A+++ G++ +A+G
Sbjct: 4160 NGDYGRLG---LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4216
Query: 313 GQLGLGPQTRSFSLIPNESDTY--------------------------FRNIPILVVPNG 346
G+LGLG T S P + D F ++ +P G
Sbjct: 4217 GKLGLGNSTAKSS--PQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4274
Query: 347 ------------------VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYP 388
++ VA G HTL +G ++ WG NS GQ + + P
Sbjct: 4275 RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP 4334
Query: 389 SPVDWCVGE-VRKLAAGGGHSA 409
+ V G+ VR+++AG HSA
Sbjct: 4335 TLVTGLQGKNVRQISAGRCHSA 4356
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 186/405 (45%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ P+L P+ ++++ I G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQ------PKL--APSFSDAQ--TIEAGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG----T 138
+ G +G+LG G + +K+L E +SI ++ + +DG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQS---TLKKLTFEPHRSIK-------KVSSSKGSDGHTLAF 473
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ ++ WG + +P+L G ++C VS G H A++E G L
Sbjct: 474 TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGEL 532
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G + P ++K ++ + +VSCG H+ A+S++G
Sbjct: 533 YTWGEGDFGRLGHGDS-NSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 581
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ + AL G+FI+ V G S ALTS G +Y
Sbjct: 582 TVWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVY 636
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V V+ G SH L D
Sbjct: 637 AWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-VSIGDSHCLALSHDNE 685
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 166/377 (44%), Gaps = 85/377 (22%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPP-------- 51
MD + T+RP D ++ K +Y+WG GQ GR + +P P
Sbjct: 3976 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMVPAAAPSFSQAQQVI 4033
Query: 52 -------------ELFGCPAGANSRW------------------------LDIACGHE-H 73
+ C G+ R L +CG + H
Sbjct: 4034 CGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGH 4093
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
+ A+ G +F+WG ++G+LG G + ++ P +++ LQ E V +SCG +A +
Sbjct: 4094 SMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT--- 4150
Query: 134 ENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-----------ICQVSCGSVHVVAL 182
+DG +L+ +G ++ RL G + + I QV+CG H +A+
Sbjct: 4151 -SDG-----KLFTFGNG---DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV 4201
Query: 183 SECG-LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
S G ++ A+G +YG+LG G P+ I I +V+CG S
Sbjct: 4202 SADGSMVWAFGDGDYGKLGLG-NSTAKSSPQKIDVLCGI--------GIKKVACGTQFSV 4252
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A++++G VYT+G + L ++ ++ P+++ L G+ I+DVA G H+ AL S
Sbjct: 4253 ALTKDGHVYTFGQDRLIGLPEGRARNHNR---PQQIPVLAGMIIEDVAVGAEHTLALASN 4309
Query: 302 GALYAWGGSQAGQLGLG 318
G +YAWG + GQLGLG
Sbjct: 4310 GDVYAWGSNSEGQLGLG 4326
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 143/307 (46%), Gaps = 43/307 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V SDG
Sbjct: 4103 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTSDGK 4154
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG++
Sbjct: 4155 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA----DGSM--- 4207
Query: 143 RLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T P I I +V+CG+ VAL++ G + +
Sbjct: 4208 -VWAFGDG---DYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4263
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ I A + I V+ G H+ A++ NG+VY
Sbjct: 4264 GQDRLIGLPEG-RARNHNRPQQIPVLAGMI--------IEDVAVGAEHTLALASNGDVYA 4314
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWGGS 310
WG S GQLG L + P V L G ++ ++ G HS A T+ A G S
Sbjct: 4315 WGSNSEGQLG---LGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVS 4371
Query: 311 QAGQLGL 317
QLGL
Sbjct: 4372 VPLQLGL 4378
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P I I +V GS +AL+ G + AW
Sbjct: 583 -VWSFG---GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I VS G+ H A+S + EVY
Sbjct: 639 GCG--ACLGCGSSEATALRPKLIEELAA--------TRIVDVSIGDSHCLALSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDGI I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 30/228 (13%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +GQL G V+ A AP + QV CG+ + + NG V
Sbjct: 4002 WGAGRHGQLAEA-------GRNVMVPAA-----APSFSQAQQVICGQNCTFVIQANGTVL 4049
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGALYAW 307
G GS G+LG + S D +L + AL G + + +CG HS ALT G +++W
Sbjct: 4050 ACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSW 4106
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G R R I L VQ+ +CG H+ V DG++
Sbjct: 4107 GDGDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLF 4156
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
+G YG+ ++ P V G ++ ++A G H+ AV AD
Sbjct: 4157 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 4204
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VSE EVY WG S QL G +E + + +A + + G + +++ G
Sbjct: 368 VSETCEVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ A G G+LGLG +L + + R+I + G HTL +
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RSIKKVSSSKG------SDGHTLAFTT 475
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+G + WG YG+ + S+ YP + + G+V ++AG HSA + +
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
>gi|114595107|ref|XP_001160807.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
[Pan troglodytes]
Length = 984
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 121/238 (50%), Gaps = 19/238 (7%)
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
VSCG H +A+ G + AWG GQLG G E P+ I KI
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGI--------KII 131
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
QVSCG YHS A+S++ +V++WG S GQLG + + P+RV +L+GI + VA G
Sbjct: 132 QVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAG 189
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN-GVQLV 350
G HS AL+ G + WG + +GQL L + +P +S+ + + + + N GV +
Sbjct: 190 GAHSFALSLCGTSFGWGSNSSGQLALSGRN-----VPVQSN---KPLSVGALKNLGVVYI 241
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
+CG +HT V +DG++ +G N GQ + P V+ G V ++ G H+
Sbjct: 242 SCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHT 299
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 151/336 (44%), Gaps = 51/336 (15%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
L A G H+ + ++ + + G N GQLG + + PE ++ L++ V +SCG
Sbjct: 26 LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKE 85
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQ-NQGS----NFPRLFWGAFTPNTI-------ICQV 172
+ A+ R++ WG ++G F + +FTP I I QV
Sbjct: 86 HSLAVCH---------KGRVFAWGAGSEGQLGIGEFKEI---SFTPKKITTLNGIKIIQV 133
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
SCG H +ALS+ + +WG N +GQLG G P+ ++ L+ P + Q
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRS----LEGIP----LAQ 185
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
V+ G HS A+S G + WG S GQL + P V AL + + ++CG
Sbjct: 186 VAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGD 245
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLV 350
H+ LT G ++ +G +++GQLG P T + P LV + V +
Sbjct: 246 AHTAVLTQDGKVFTFGDNRSGQLGYSP-------------TPEKRGPQLVERIDGLVSQI 292
Query: 351 ACGHSHTLVYMR-DGRIHGWGYNSYGQAANEKSTYA 385
CG HTL Y+ G++ +G +G + K T++
Sbjct: 293 DCGSYHTLAYVHTTGQVVSFG---HGPSDTSKPTHS 325
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 152/350 (43%), Gaps = 63/350 (18%)
Query: 27 GYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLD-IACGHEHTAAVASDGTLFT 85
G N GQ GR+G +R +LP + + +D ++CG EH+ AV G +F
Sbjct: 48 GDNSRGQLGRRGAQR-----GELPEPI----QALETLTVDLVSCGKEHSLAVCHKGRVFA 98
Query: 86 WGANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRL 144
WGA GQLG G +E P+K+ L + +SCG + + A+++ S++
Sbjct: 99 WGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK---------DSQV 149
Query: 145 WVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+ WG+N G FP +P + + QV+ G H ALS CG W
Sbjct: 150 FSWGKNSHGQLGLGKEFP----SQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW 205
Query: 192 GYNEYGQL---GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
G N GQL GR + + + V G K L + +SCG+ H+A ++++G+
Sbjct: 206 GSNSSGQLALSGRNVPVQSNKPLSV--GALKNLG-------VVYISCGDAHTAVLTQDGK 256
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
V+T+G GQLG+ ++ P+ V +DG+ + + CG H+ A Y
Sbjct: 257 VFTFGDNRSGQLGY---SPTPEKRGPQLVERIDGL-VSQIDCGSYHTLA-------YVHT 305
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 358
Q G GP S P S+ N I + + LV H
Sbjct: 306 TGQVVSFGHGPSDTS---KPTHSEALTENFDISCLISAEDLVDVHVKHIF 352
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 119/242 (49%), Gaps = 25/242 (10%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG GQ G G +++ + L G + + ++CGH H+ A++
Sbjct: 93 KGRVFAWGAGSEGQLG-IGEFKEISFTPKKITTLNGI------KIIQVSCGHYHSLALSK 145
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISC-GAHCTA-AIAEPREND 136
D +F+WG N GQLG G E + P++V+ L+ + ++ GAH A ++
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW 205
Query: 137 GTISTSRLWVWGQN--QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
G+ S+ +L + G+N SN P L GA N + +SCG H L++ G + +G N
Sbjct: 206 GSNSSGQLALSGRNVPVQSNKP-LSVGALK-NLGVVYISCGDAHTAVLTQDGKVFTFGDN 263
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEVYTWG 253
GQLG T E +GP++++ ++Q+ CG YH+ A V G+V ++G
Sbjct: 264 RSGQLGYSPTPEK-RGPQLVERIDGL---------VSQIDCGSYHTLAYVHTTGQVVSFG 313
Query: 254 LG 255
G
Sbjct: 314 HG 315
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 61/149 (40%), Gaps = 14/149 (9%)
Query: 267 SGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSL 326
+ +EL RR G + A G HS L + + + G + GQLG R
Sbjct: 7 TDSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQR--GE 64
Query: 327 IPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ-AANEKSTY 384
+P PI + V LV+CG H+L GR+ WG S GQ E
Sbjct: 65 LPE---------PIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI 115
Query: 385 AWYPSPVDWCVG-EVRKLAAGGGHSAVLA 412
++ P + G ++ +++ G HS L+
Sbjct: 116 SFTPKKITTLNGIKIIQVSCGHYHSLALS 144
>gi|410211612|gb|JAA03025.1| hect domain and RLD 6 [Pan troglodytes]
Length = 1020
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 121/238 (50%), Gaps = 19/238 (7%)
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
VSCG H +A+ G + AWG GQLG G E P+ I KI
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGI--------KII 131
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
QVSCG YHS A+S++ +V++WG S GQLG + + P+RV +L+GI + VA G
Sbjct: 132 QVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAG 189
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN-GVQLV 350
G HS AL+ G + WG + +GQL L + +P +S+ + + + + N GV +
Sbjct: 190 GAHSFALSLCGTSFGWGSNSSGQLALSGRN-----VPVQSN---KPLSVGALKNLGVVYI 241
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
+CG +HT V +DG++ +G N GQ + P V+ G V ++ G H+
Sbjct: 242 SCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHT 299
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 151/336 (44%), Gaps = 51/336 (15%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
L A G H+ + ++ + + G N GQLG + + PE ++ L++ V +SCG
Sbjct: 26 LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKE 85
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQ-NQGS----NFPRLFWGAFTPNTI-------ICQV 172
+ A+ R++ WG ++G F + +FTP I I QV
Sbjct: 86 HSLAVCH---------KGRVFAWGAGSEGQLGIGEFKEI---SFTPKKITTLNGIKIIQV 133
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
SCG H +ALS+ + +WG N +GQLG G P+ ++ L+ P + Q
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRS----LEGIP----LAQ 185
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
V+ G HS A+S G + WG S GQL + P V AL + + ++CG
Sbjct: 186 VAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGD 245
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLV 350
H+ LT G ++ +G +++GQLG P T + P LV + V +
Sbjct: 246 AHTAVLTQDGKVFTFGDNRSGQLGYSP-------------TPEKRGPQLVERIDGLVSQI 292
Query: 351 ACGHSHTLVYMR-DGRIHGWGYNSYGQAANEKSTYA 385
CG HTL Y+ G++ +G +G + K T++
Sbjct: 293 DCGSYHTLAYVHTTGQVVSFG---HGPSDTSKPTHS 325
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 152/350 (43%), Gaps = 63/350 (18%)
Query: 27 GYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLD-IACGHEHTAAVASDGTLFT 85
G N GQ GR+G +R +LP + + +D ++CG EH+ AV G +F
Sbjct: 48 GDNSRGQLGRRGAQR-----GELPEPI----QALETLTVDLVSCGKEHSLAVCHKGRVFA 98
Query: 86 WGANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRL 144
WGA GQLG G +E P+K+ L + +SCG + + A+++ S++
Sbjct: 99 WGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK---------DSQV 149
Query: 145 WVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+ WG+N G FP +P + + QV+ G H ALS CG W
Sbjct: 150 FSWGKNSHGQLGLGKEFP----SQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW 205
Query: 192 GYNEYGQL---GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
G N GQL GR + + + V G K L + +SCG+ H+A ++++G+
Sbjct: 206 GSNSSGQLALSGRNVPVQSNKPLSV--GALKNLG-------VVYISCGDAHTAVLTQDGK 256
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
V+T+G GQLG+ ++ P+ V +DG+ + + CG H+ A Y
Sbjct: 257 VFTFGDNRSGQLGY---SPTPEKRGPQLVERIDGL-VSQIDCGSYHTLA-------YVHT 305
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 358
Q G GP S P S+ N I + + LV H
Sbjct: 306 TGQVVSFGHGPSDTS---KPTHSEALTENFDISCLISAEDLVDVHVKHIF 352
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 119/242 (49%), Gaps = 25/242 (10%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG GQ G G +++ + L G + + ++CGH H+ A++
Sbjct: 93 KGRVFAWGAGSEGQLG-IGEFKEISFTPKKITTLNGI------KIIQVSCGHYHSLALSK 145
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISC-GAHCTA-AIAEPREND 136
D +F+WG N GQLG G E + P++V+ L+ + ++ GAH A ++
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW 205
Query: 137 GTISTSRLWVWGQN--QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
G+ S+ +L + G+N SN P L GA N + +SCG H L++ G + +G N
Sbjct: 206 GSNSSGQLALSGRNVPVQSNKP-LSVGALK-NLGVVYISCGDAHTAVLTQDGKVFTFGDN 263
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEVYTWG 253
GQLG T E +GP++++ ++Q+ CG YH+ A V G+V ++G
Sbjct: 264 RSGQLGYSPTPEK-RGPQLVERIDGL---------VSQIDCGSYHTLAYVHTTGQVVSFG 313
Query: 254 LG 255
G
Sbjct: 314 HG 315
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 61/149 (40%), Gaps = 14/149 (9%)
Query: 267 SGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSL 326
+ +EL RR G + A G HS L + + + G + GQLG R
Sbjct: 7 TDSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQR--GE 64
Query: 327 IPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA-ANEKSTY 384
+P PI + V LV+CG H+L GR+ WG S GQ E
Sbjct: 65 LPE---------PIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI 115
Query: 385 AWYPSPVDWCVG-EVRKLAAGGGHSAVLA 412
++ P + G ++ +++ G HS L+
Sbjct: 116 SFTPKKITTLNGIKIIQVSCGHYHSLALS 144
>gi|326668760|ref|XP_686789.5| PREDICTED: e3 ubiquitin-protein ligase HERC2, partial [Danio rerio]
Length = 3645
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 178/410 (43%), Gaps = 65/410 (15%)
Query: 20 KSAIYVWGYNHSGQTG-RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
++ ++VWG N Q G KG + ++ P + N + +A G + AV
Sbjct: 1767 RTKVFVWGLNDKDQLGGLKGSKIKV-------PSFSETLSALNV--VQVAGGSKSLFAVT 1817
Query: 79 SDGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRE 134
++G ++ G G+LG G G P ++ L + VK ++ G H A
Sbjct: 1818 AEGKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTV---- 1873
Query: 135 NDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSE 184
DG +++ WG+ PRL T I ++CGS H A++
Sbjct: 1874 -DG-----KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAAITS 1925
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAA 242
G L +WG EYG+LG G L+ P+++K ++ QV+CG + + A
Sbjct: 1926 SGELYSWGLGEYGRLGHGDNTTQLR-PKLVKVLLG--------HRVVQVACGSRDAQTLA 1976
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
+++ G V++WG G G+LG + + +P+ + L+G + + CG S ALT G
Sbjct: 1977 LTDEGMVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTKSG 2033
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLVY 360
++ WG +LG G +D + R ++ G ++V A G H L
Sbjct: 2034 VVWTWGKGDYFRLGHG------------TDVHVRKPQMVEGLRGKKIVHVAVGALHCLAV 2081
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
G++ WG N +GQ N +T P+ V G+ + ++A G HS
Sbjct: 2082 TETGQVFAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 2131
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 166/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A+ +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 1816 VTAEGKVYACGEATNGRLGLGLSSGTIPIPRQI-----SALSNYVVKKVAVHSGGRHAMA 1870
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AAI
Sbjct: 1871 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT------ 1924
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 1925 ---SSGELYSWGLGE---YGRLGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALT 1978
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ G++ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 1979 DEGMVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 2029
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH + K P+ V L G I VA G +H A+T G
Sbjct: 2030 TKSGVVWTWGKGDYFRLGHGTDVHVRK---PQMVEGLRGKKIVHVAVGALHCLAVTETGQ 2086
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
++AWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 2087 VFAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 2133
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 134/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 1877 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAAITSSGE 1928
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L++WG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 1929 LYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEG------- 1981
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 1982 MVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 2038
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P++++G +KI V+ G H AV+E G+V+
Sbjct: 2039 GKGDYFRLGHGTDVH-VRKPQMVEGLRG--------KKIVHVAVGALHCLAVTETGQVFA 2089
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 2090 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 2135
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 128/283 (45%), Gaps = 35/283 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +DIA G H+A + + G
Sbjct: 2871 LYSWGEAEDGKLGHGNRSPCDR------PRVIESLRGVEV--VDIAAGGAHSACITASGE 2922
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG G E + P+ V+ LQ V ++CG+ + ++
Sbjct: 2923 LYTWGKGRYGRLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDD------- 2975
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
+W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 2976 MVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 3035
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 3036 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 3086
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
GQLG + + + PR V AL G I VACG H+ A
Sbjct: 3087 NDEGQLGDGTTNAIQR---PRLVAALQGKKINRVACGSAHTLA 3126
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 139/314 (44%), Gaps = 53/314 (16%)
Query: 63 RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG 122
R + + G +H A++S+G L++WG E G+LG G P ++ L+ V I+ G
Sbjct: 2851 RKVAVNSGGKHCLALSSEGELYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAG 2910
Query: 123 AHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQ 171
+A I ++ L+ WG+ + + RL G P + +
Sbjct: 2911 GAHSACIT---------ASGELYTWGKGR---YGRLGHGDSEDQLKPKLVEALQGHRVID 2958
Query: 172 VSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK 229
V+CGS + L++ ++ +WG +YG+LGRG +G + P I
Sbjct: 2959 VACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------G 3009
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+ +V CG S A++++G VYTWG G +LGH S D PR+V L G + +A
Sbjct: 3010 VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIA 3066
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NG 346
G +H T G +Y WG + GQLG G T P LV
Sbjct: 3067 TGSLHCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKK 3113
Query: 347 VQLVACGHSHTLVY 360
+ VACG +HTL +
Sbjct: 3114 INRVACGSAHTLAW 3127
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 176/412 (42%), Gaps = 76/412 (18%)
Query: 22 AIYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
IY WG+NH GQ G G E ++++P P E A A R + + G + AV +D
Sbjct: 2764 TIYGWGHNHRGQLG--GIEGAKVKVPT--PTE-----ALATLRPVQLIGGEQTLFAVTAD 2814
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDG 137
G L+ G G+LG G E P ++ +Q F++ ++ G HC A +E
Sbjct: 2815 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSE------ 2868
Query: 138 TISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
L+ WG+ + PR+ + ++ G H ++ G
Sbjct: 2869 ----GELYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GVEVVDIAAGGAHSACITASGE 2922
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSE 245
L WG YG+LG G + + L+ P+++ EA + ++ V+C G+ + +++
Sbjct: 2923 LYTWGKGRYGRLGHGDSEDQLK-PKLV--------EALQGHRVIDVACGSGDAQTLCLTD 2973
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+ V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 2974 DDMVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVY 3030
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHT 357
WG +LG G SD + R P VQ +A G H
Sbjct: 3031 TWGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHC 3072
Query: 358 LVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
+ DG ++ WG N GQ + + P V G ++ ++A G H+
Sbjct: 3073 VCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 3124
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 124/253 (49%), Gaps = 30/253 (11%)
Query: 134 ENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N +GS + + QV+ GS + A++
Sbjct: 1761 ESAATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTAE 1819
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + A G G+LG G++ + PR I + ++ K V G H+ A++
Sbjct: 1820 GKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYV------VKKVAVHSGGRHAMALTV 1873
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS A+TS G LY
Sbjct: 1874 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAAITSSGELY 1930
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRD 363
+WG + G+LG G N + + + +L+ VQ VACG + TL +
Sbjct: 1931 SWGLGEYGRLGHG---------DNTTQLRPKLVKVLLGHRVVQ-VACGSRDAQTLALTDE 1980
Query: 364 GRIHGWGYNSYGQ 376
G + WG +G+
Sbjct: 1981 GMVFSWGDGDFGK 1993
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 139/340 (40%), Gaps = 30/340 (8%)
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEP 132
T + GT++ WG N GQLG K P + L + V+ I A A+
Sbjct: 2756 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADG 2815
Query: 133 RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWG 192
+ G + + P L V+ G H +ALS G L +WG
Sbjct: 2816 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWG 2875
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
E G+LG G PRVI+ ++ ++ G HSA ++ +GE+YTW
Sbjct: 2876 EAEDGKLGHG-NRSPCDRPRVIESLRGV--------EVVDIAAGGAHSACITASGELYTW 2926
Query: 253 GLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWG 308
G G G+LGH GD E L P+ V AL G + DVACG + LT +++WG
Sbjct: 2927 GKGRYGRLGH-----GDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWG 2981
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHG 368
G+LG G +P + D+ + GV V CG ++ + G ++
Sbjct: 2982 DGDYGKLGRG--GSDGCKVPMKIDS--------LTGLGVVKVECGSQFSVALTKSGAVYT 3031
Query: 369 WGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGH 407
WG Y + + + P V G +V +A G H
Sbjct: 3032 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 3071
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 110/247 (44%), Gaps = 23/247 (9%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
Q+ G + A++ G L A GY G+LG G T E + P +++ + K+
Sbjct: 2800 QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGT-ESVSTPTLLESIQHVF-----IRKV 2853
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
V+ G H A+S GE+Y+WG G+LGH + D+ PR + +L G+ + D+A
Sbjct: 2854 A-VNSGGKHCLALSSEGELYSWGEAEDGKLGHGNRSPCDR---PRVIESLRGVEVVDIAA 2909
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
GG HS +T+ G LY WG + G+LG G + D + + + V V
Sbjct: 2910 GGAHSACITASGELYTWGKGRYGRLGHG----------DSEDQLKPKLVEALQGHRVIDV 2959
Query: 351 AC--GHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGH 407
AC G + TL D + WG YG+ S P +D G V K+ G
Sbjct: 2960 ACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQF 3019
Query: 408 SAVLADA 414
S L +
Sbjct: 3020 SVALTKS 3026
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 36/193 (18%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ GR G + ++P ++ L G + + CG + + A+ G
Sbjct: 2977 VWSWGDGDYGKLGRGGSD-GCKVPMKID-SLTGLGV------VKVECGSQFSVALTKSGA 3028
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIST 141
++TWG ++ +LG G+++ + P +V+ LQ + V +I+ G+ HC DG +
Sbjct: 3029 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCT-----EDGEV-- 3081
Query: 142 SRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALS-----ECG 186
+ WG N PRL A I +V+CGS H +A S G
Sbjct: 3082 ---YTWGDNDEGQLGDGTTNAIQRPRLV--AALQGKKINRVACGSAHTLAWSTSKPTNAG 3136
Query: 187 LLQAWGYNEYGQL 199
L A EY L
Sbjct: 3137 KLPAQVPMEYNHL 3149
>gi|114595105|ref|XP_001160851.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
[Pan troglodytes]
Length = 1020
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 121/238 (50%), Gaps = 19/238 (7%)
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
VSCG H +A+ G + AWG GQLG G E P+ I KI
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGI--------KII 131
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
QVSCG YHS A+S++ +V++WG S GQLG + + P+RV +L+GI + VA G
Sbjct: 132 QVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAG 189
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN-GVQLV 350
G HS AL+ G + WG + +GQL L + +P +S+ + + + + N GV +
Sbjct: 190 GAHSFALSLCGTSFGWGSNSSGQLALSGRN-----VPVQSN---KPLSVGALKNLGVVYI 241
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
+CG +HT V +DG++ +G N GQ + P V+ G V ++ G H+
Sbjct: 242 SCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHT 299
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 151/336 (44%), Gaps = 51/336 (15%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
L A G H+ + ++ + + G N GQLG + + PE ++ L++ V +SCG
Sbjct: 26 LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKE 85
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQ-NQGS----NFPRLFWGAFTPNTI-------ICQV 172
+ A+ R++ WG ++G F + +FTP I I QV
Sbjct: 86 HSLAVCH---------KGRVFAWGAGSEGQLGIGEFKEI---SFTPKKITTLNGIKIIQV 133
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
SCG H +ALS+ + +WG N +GQLG G P+ ++ L+ P + Q
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRS----LEGIP----LAQ 185
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
V+ G HS A+S G + WG S GQL + P V AL + + ++CG
Sbjct: 186 VAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGD 245
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLV 350
H+ LT G ++ +G +++GQLG P T + P LV + V +
Sbjct: 246 AHTAVLTQDGKVFTFGDNRSGQLGYSP-------------TPEKRGPQLVERIDGLVSQI 292
Query: 351 ACGHSHTLVYMR-DGRIHGWGYNSYGQAANEKSTYA 385
CG HTL Y+ G++ +G +G + K T++
Sbjct: 293 DCGSYHTLAYVHTTGQVVSFG---HGPSDTSKPTHS 325
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 152/350 (43%), Gaps = 63/350 (18%)
Query: 27 GYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLD-IACGHEHTAAVASDGTLFT 85
G N GQ GR+G +R +LP + + +D ++CG EH+ AV G +F
Sbjct: 48 GDNSRGQLGRRGAQR-----GELPEPI----QALETLTVDLVSCGKEHSLAVCHKGRVFA 98
Query: 86 WGANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRL 144
WGA GQLG G +E P+K+ L + +SCG + + A+++ S++
Sbjct: 99 WGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK---------DSQV 149
Query: 145 WVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+ WG+N G FP +P + + QV+ G H ALS CG W
Sbjct: 150 FSWGKNSHGQLGLGKEFP----SQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW 205
Query: 192 GYNEYGQL---GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
G N GQL GR + + + V G K L + +SCG+ H+A ++++G+
Sbjct: 206 GSNSSGQLALSGRNVPVQSNKPLSV--GALKNLG-------VVYISCGDAHTAVLTQDGK 256
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
V+T+G GQLG+ ++ P+ V +DG+ + + CG H+ A Y
Sbjct: 257 VFTFGDNRSGQLGY---SPTPEKRGPQLVERIDGL-VSQIDCGSYHTLA-------YVHT 305
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTL 358
Q G GP S P S+ N I + + LV H
Sbjct: 306 TGQVVSFGHGPSDTS---KPTHSEALTENFDISCLISAEDLVDVHVKHIF 352
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 119/242 (49%), Gaps = 25/242 (10%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG GQ G G +++ + L G + + ++CGH H+ A++
Sbjct: 93 KGRVFAWGAGSEGQLG-IGEFKEISFTPKKITTLNGI------KIIQVSCGHYHSLALSK 145
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISC-GAHCTA-AIAEPREND 136
D +F+WG N GQLG G E + P++V+ L+ + ++ GAH A ++
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW 205
Query: 137 GTISTSRLWVWGQN--QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
G+ S+ +L + G+N SN P L GA N + +SCG H L++ G + +G N
Sbjct: 206 GSNSSGQLALSGRNVPVQSNKP-LSVGALK-NLGVVYISCGDAHTAVLTQDGKVFTFGDN 263
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEVYTWG 253
GQLG T E +GP++++ ++Q+ CG YH+ A V G+V ++G
Sbjct: 264 RSGQLGYSPTPEK-RGPQLVERIDGL---------VSQIDCGSYHTLAYVHTTGQVVSFG 313
Query: 254 LG 255
G
Sbjct: 314 HG 315
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 61/149 (40%), Gaps = 14/149 (9%)
Query: 267 SGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSL 326
+ +EL RR G + A G HS L + + + G + GQLG R
Sbjct: 7 TDSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQR--GE 64
Query: 327 IPNESDTYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA-ANEKSTY 384
+P PI + V LV+CG H+L GR+ WG S GQ E
Sbjct: 65 LPE---------PIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI 115
Query: 385 AWYPSPVDWCVG-EVRKLAAGGGHSAVLA 412
++ P + G ++ +++ G HS L+
Sbjct: 116 SFTPKKITTLNGIKIIQVSCGHYHSLALS 144
>gi|198415420|ref|XP_002129368.1| PREDICTED: similar to regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 1 [Ciona
intestinalis]
Length = 554
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 125/260 (48%), Gaps = 30/260 (11%)
Query: 148 GQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEG 207
G N S PRL +F+ II + HV+ L++ G + +WG+N Y QLG G T G
Sbjct: 81 GDNSSSLEPRLL-ESFSGQKIISLSAGSGPHVLVLTQDGGVYSWGHNSYMQLGNGGTSPG 139
Query: 208 LQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQS 267
+ + + K+ Q++CG +HS A++ GEVYTWG + GQ+G S +
Sbjct: 140 TSPSLLSRNISN---------KVVQIACGSHHSMALTTEGEVYTWGYNNCGQIGSGSTAN 190
Query: 268 GDKELLPRRVVALDG-IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSL 326
PR+V A G I D+ CG S +T G +Y+WG + GQLG+G
Sbjct: 191 QGS---PRKVTACIGNKRIIDITCGQTTSLCVTDSGEVYSWGYNGNGQLGVGNNV----- 242
Query: 327 IPNESDTYFRNIPILVVP-NGVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKST 383
N+++ P V GV + V CG++H L +G + GWG NSYGQ +
Sbjct: 243 --NQTN------PCRVAALQGVVIAQVVCGYAHALALTDNGVVFGWGANSYGQLGSGNKA 294
Query: 384 YAWYPSPVDWCVGEVRKLAA 403
P V +G V LAA
Sbjct: 295 NTCTPLQVATRIGRVVCLAA 314
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 138/303 (45%), Gaps = 44/303 (14%)
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
D +++ G N G LG G P ++ + + S+S G+ + DG +
Sbjct: 64 DEKVYSLGTNTSGCLGVGDNSSSLEPRLLESFSGQKIISLSAGSGPHVLVLT---QDGGV 120
Query: 140 STSRLWVWGQNQGSNFPRLFWGAFTPNT-----------IICQVSCGSVHVVALSECGLL 188
+ WG N ++ +L G +P T + Q++CGS H +AL+ G +
Sbjct: 121 -----YSWGHN---SYMQLGNGGTSPGTSPSLLSRNISNKVVQIACGSHHSMALTTEGEV 172
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WGYN GQ+G G T +G + + ++I ++CG+ S V+++GE
Sbjct: 173 YTWGYNNCGQIGSGSTAN--------QGSPRKVTACIGNKRIIDITCGQTTSLCVTDSGE 224
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
VY+WG GQLG + + + P RV AL G+ I V CG H+ ALT G ++ WG
Sbjct: 225 VYSWGYNGNGQLG---VGNNVNQTNPCRVAALQGVVIAQVVCGYAHALALTDNGVVFGWG 281
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH-TLVYMRDGRIH 367
+ GQLG G ++ + P + T + V L A +SH + + G I+
Sbjct: 282 ANSYGQLGSG--NKANTCTPLQVATRIGRV--------VCLAATHYSHSSAARNQSGHIY 331
Query: 368 GWG 370
WG
Sbjct: 332 MWG 334
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 129/317 (40%), Gaps = 48/317 (15%)
Query: 7 IGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLD 66
G++A V +Y G N SG G L P L +G L
Sbjct: 51 FGQSATEVIFTTLDEKVYSLGTNTSGCLGVGDNSSSLE------PRLLESFSGQKIISLS 104
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
G H + DG +++WG N + QLG+G P + + S V I+CG+H +
Sbjct: 105 AGSG-PHVLVLTQDGGVYSWGHNSYMQLGNGGTSPGTSPSLLSRNISNKVVQIACGSHHS 163
Query: 127 AAIAEPRENDGTISTSRLWVWG------------QNQGSNFPRLFWGAFTPNTIICQVSC 174
A+ E ++ WG NQGS PR A N I ++C
Sbjct: 164 MALTTEGE---------VYTWGYNNCGQIGSGSTANQGS--PRKV-TACIGNKRIIDITC 211
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G + +++ G + +WGYN GQLG G RV A + I QV
Sbjct: 212 GQTTSLCVTDSGEVYSWGYNGNGQLGVGNNVNQTNPCRV---------AALQGVVIAQVV 262
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG 292
CG H+ A+++NG V+ WG S GQLG SG+K P +V G + A
Sbjct: 263 CGYAHALALTDNGVVFGWGANSYGQLG-----SGNKANTCTPLQVATRIGRVVCLAATHY 317
Query: 293 VHSCALTSK-GALYAWG 308
HS A ++ G +Y WG
Sbjct: 318 SHSSAARNQSGHIYMWG 334
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 120/270 (44%), Gaps = 41/270 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG+N Q G G P P L +++ + IACG H+ A+ ++G
Sbjct: 120 VYSWGHNSYMQLGNGGTS-----PGTSPSLL---SRNISNKVVQIACGSHHSMALTTEGE 171
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRE--NDGTI 139
++TWG N GQ+G G+ + P KV + ++ + I+CG + + + E + G
Sbjct: 172 VYTWGYNNCGQIGSGSTANQGSPRKVTACIGNKRIIDITCGQTTSLCVTDSGEVYSWGYN 231
Query: 140 STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
+L V +N R+ A +I QV CG H +AL++ G++ WG N YGQL
Sbjct: 232 GNGQLGVGNNVNQTNPCRV---AALQGVVIAQVVCGYAHALALTDNGVVFGWGANSYGQL 288
Query: 200 GRG---ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEY--HSAAVSENGEVYTWGL 254
G G TC LQ A + ++ ++ Y SAA +++G +Y W
Sbjct: 289 GSGNKANTCTPLQ-------------VATRIGRVVCLAATHYSHSSAARNQSGHIYMW-- 333
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIF 284
GQL Q E P L+ +F
Sbjct: 334 ---GQL----RQQATPEPKPTNFTDLNAVF 356
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 74/166 (44%), Gaps = 16/166 (9%)
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG-GVHSCALTSKGALYA 306
+VY+ G + G LG + L PR + + G I ++ G G H LT G +Y+
Sbjct: 66 KVYSLGTNTSGCLG---VGDNSSSLEPRLLESFSGQKIISLSAGSGPHVLVLTQDGGVYS 122
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYF-RNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
WG + QLG G + P S + RNI N V +ACG H++ +G
Sbjct: 123 WGHNSYMQLGNGGTS------PGTSPSLLSRNIS-----NKVVQIACGSHHSMALTTEGE 171
Query: 366 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVL 411
++ WGYN+ GQ + + P V C+G R + G + L
Sbjct: 172 VYTWGYNNCGQIGSGSTANQGSPRKVTACIGNKRIIDITCGQTTSL 217
>gi|115476524|ref|NP_001061858.1| Os08g0430700 [Oryza sativa Japonica Group]
gi|38175475|dbj|BAD01172.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
gi|113623827|dbj|BAF23772.1| Os08g0430700 [Oryza sativa Japonica Group]
gi|215734996|dbj|BAG95718.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640598|gb|EEE68730.1| hypothetical protein OsJ_27407 [Oryza sativa Japonica Group]
Length = 395
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 167/404 (41%), Gaps = 75/404 (18%)
Query: 13 PVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHE 72
P ++P +A+ WG GQ G G E + + A + G
Sbjct: 5 PASSLP--TAVLAWGSGEDGQLGMGGYEEEDWARGVAALDALAVSA--------VVAGSR 54
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIA 130
++ A+ +DG LFTWG N+ G LG E + P V L V++ G HC A
Sbjct: 55 NSLAICADGRLFTWGWNQRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGGWHCLA--- 111
Query: 131 EPRENDGTISTSRLWVWGQNQ----GSNFPRLFWGAFT------------PNTIICQVSC 174
R + WG N+ G R G P + QV+
Sbjct: 112 -------VDDKGRAYAWGGNEYGQCGEEAERKEDGTRALRRDIPIPQGCAPKLKVRQVAA 164
Query: 175 GSVHVVALSECGLLQAWGY----NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
G H V L++ G + WG + Q+ + +GL+ +VI
Sbjct: 165 GGTHSVVLTQDGHVWTWGQPWPPGDIKQISTPVRVQGLENVKVI---------------- 208
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
+ G +H+ A++E+G ++ WG GQLG Q + P RV L + + D+A
Sbjct: 209 ---AVGAFHNLALTEDGILWAWGNNEYGQLGTGDTQPRSQ---PIRVEGLSDLSLVDIAA 262
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
GG HS ALT +G +YAWG + G+LG G +S ++P + + L+ + V
Sbjct: 263 GGWHSTALTKEGEVYAWGRGEHGRLGFG-DDKSSHMVPQKVE--------LLAGEDIIQV 313
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPS--PVD 392
+CG +H++ RDGR+ +G +G+ + +P P+D
Sbjct: 314 SCGGTHSVALTRDGRMFSYGRGDHGRLGYGRKVTTGHPMEVPID 357
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 131/303 (43%), Gaps = 50/303 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQ--LRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAV 77
K Y WG N GQ G + ++ R ++ P GC R +A G H+ +
Sbjct: 115 KGRAYAWGGNEYGQCGEEAERKEDGTRALRRDIPIPQGCAPKLKVR--QVAAGGTHSVVL 172
Query: 78 ASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG 137
DG ++TWG G + P +V+ L E VK I+ GA A+ E DG
Sbjct: 173 TQDGHVWTWGQ----PWPPGDIKQISTPVRVQGL--ENVKVIAVGAFHNLALTE----DG 222
Query: 138 TISTSRLWVWGQNQGSNFPRLFWGAFTPNT-----------IICQVSCGSVHVVALSECG 186
LW WG N+ + +L G P + + ++ G H AL++ G
Sbjct: 223 I-----LWAWGNNE---YGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTKEG 274
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ AWG E+G+LG G P+ ++ A E I QVSCG HS A++ +
Sbjct: 275 EVYAWGRGEHGRLGFGDDKSSHMVPQKVELLAG--------EDIIQVSCGGTHSVALTRD 326
Query: 247 GEVYTWGLGSVGQLGHC-SLQSGDK-----ELLPRRVVALDG---IFIKDVACGGVHSCA 297
G ++++G G G+LG+ + +G +L P D + VACGG H+ A
Sbjct: 327 GRMFSYGRGDHGRLGYGRKVTTGHPMEVPIDLPPPGTSGGDSGGQWQARYVACGGRHTLA 386
Query: 298 LTS 300
+ +
Sbjct: 387 IAT 389
>gi|55249804|gb|AAH85921.1| Herc6 protein, partial [Rattus norvegicus]
Length = 1034
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 146/355 (41%), Gaps = 78/355 (21%)
Query: 58 AGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVK 117
AG + L A G H+ + S+ +++ G N GQLG + + K P
Sbjct: 24 AGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRP------------ 71
Query: 118 SISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSV 177
EP + T+ I VSCG
Sbjct: 72 -------------EPIQALSTVH----------------------------IDLVSCGKE 90
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H VA+ G + WG GQLG G + E P I A KI QVSCG
Sbjct: 91 HSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGI--------KIIQVSCGH 142
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGH----CSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
YHS A+SE+G+V++WG GQLG CS S P++V +L+GI + VA GG
Sbjct: 143 YHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQAS------PQKVKSLEGIPLAQVAAGGT 196
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG 353
HS AL+ G + WG +++GQL L + + S + + V ++CG
Sbjct: 197 HSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTL-------NVVYISCG 249
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
+ HT V DG++ +G +S Q + + P ++ G V ++ G H+
Sbjct: 250 YEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYHT 304
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 96/189 (50%), Gaps = 20/189 (10%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
K+ + + GE HS + N VY+ G S GQLG S QS + P + AL + I V
Sbjct: 29 KLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKR---PEPIQALSTVHIDLV 85
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
+CG HS A+ +G ++ WG GQLG+G +++ S +P + ++ G++
Sbjct: 86 SCGKEHSVAVCHQGRVFTWGAGSEGQLGIG-ESKEISFMPTKINSL----------AGIK 134
Query: 349 L--VACGHSHTLVYMRDGRIHGWGYNSYGQ--AANEKSTYAWYPSPVDWCVG-EVRKLAA 403
+ V+CGH H+L DG++ WG N GQ N + A P V G + ++AA
Sbjct: 135 IIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQA-SPQKVKSLEGIPLAQVAA 193
Query: 404 GGGHSAVLA 412
GG HS L+
Sbjct: 194 GGTHSFALS 202
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 78/191 (40%), Gaps = 29/191 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G P+++ L G P +A G H+ A++ GT
Sbjct: 154 VFSWGSNRQGQLGLGNNLCSQASPQKV-KSLEGIPLA------QVAAGGTHSFALSLMGT 206
Query: 83 LFTWGANEFGQL---GDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
F WG N GQL G+ +E P + L++ V ISCG T+ + E DG +
Sbjct: 207 SFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTE----DGQV 262
Query: 140 -----STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
S+S G P+L G + Q+ CGS H +A +
Sbjct: 263 FTFGGSSSEQLQHSPRSGRGGPQLIEGI---GGHVSQIECGSYHTIAY-------VYTTG 312
Query: 195 EYGQLGRGITC 205
+ LGRG +C
Sbjct: 313 QVVSLGRGPSC 323
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 66/144 (45%), Gaps = 16/144 (11%)
Query: 274 PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG-LGPQTRSFSLIPNESD 332
PRR+ A G+ + A G HS L S +Y+ G + GQLG PQ+
Sbjct: 19 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTK--------- 69
Query: 333 TYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ-AANEKSTYAWYPSP 390
R PI + + LV+CG H++ GR+ WG S GQ E ++ P+
Sbjct: 70 ---RPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTK 126
Query: 391 VDWCVG-EVRKLAAGGGHSAVLAD 413
++ G ++ +++ G HS L++
Sbjct: 127 INSLAGIKIIQVSCGHYHSLALSE 150
>gi|332841362|ref|XP_003314204.1| PREDICTED: RCC1 and BTB domain-containing protein 2, partial [Pan
troglodytes]
Length = 552
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 112/227 (49%), Gaps = 22/227 (9%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H+V + G + WG+N Y QLG G T GL + + +++ +V+CG
Sbjct: 113 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN--------KQVIEVACGS 164
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHSC 296
YHS ++ +GEV+ WG + GQ+G S + + +PRRV L + +ACG +
Sbjct: 165 YHSLVLTSDGEVFAWGYNNSGQVGSGSTVN---QPIPRRVTGCLQNKVVVTIACGQMCCM 221
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G +Y WG + GQLGLG + + R VQ VACG++H
Sbjct: 222 AVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR----------VQRVACGYAH 271
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 403
TLV +G+++ WG NSYGQ + YP+PV + ++AA
Sbjct: 272 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA 318
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 131/300 (43%), Gaps = 43/300 (14%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTAAIAEPRENDGTIS 140
+F G N G LG G + P ++ L + + +S G+ H A E
Sbjct: 70 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTE--------- 120
Query: 141 TSRLWVWGQNQGSNFPR---------LFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
++ WG N S N + +V+CGS H + L+ G + AW
Sbjct: 121 -GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAW 179
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
GYN GQ+G G T PR + G + + + ++CG+ AV + GEVY
Sbjct: 180 GYNNSGQVGSGSTVNQ-PIPRRVTG-------CLQNKVVVTIACGQMCCMAVVDTGEVYV 231
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG GQLG L + + P RV AL GI ++ VACG H+ LT +G +YAWG +
Sbjct: 232 WGYNGNGQLG---LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 288
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRIHGWG 370
GQLG G N+S+ + + +++ AC +HT + G ++ WG
Sbjct: 289 YGQLGTG----------NKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 338
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 113/243 (46%), Gaps = 39/243 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G +P + L +N + +++ACG H+ + SDG
Sbjct: 123 VFTWGHNAYSQLG-NGTTNHGLVPCHISTNL------SNKQVIEVACGSYHSLVLTSDGE 175
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P +V LQ++ V +I+CG C A+ + T
Sbjct: 176 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAV---------VDT 226
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N N P A + +V+CG H + L++ G + AWG
Sbjct: 227 GEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 286
Query: 194 NEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G + + P + E ++I ++ +C H SAA ++ G VY
Sbjct: 287 NSYGQLGTGNKSNQSYPTPVTV-----------EKDRIIEIAACHSTHTSAAKTQGGHVY 335
Query: 251 TWG 253
WG
Sbjct: 336 MWG 338
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 72/154 (46%), Gaps = 19/154 (12%)
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHSCALTSK 301
N E++ G G LG +QS + PRR+ +L+G K +AC G H T++
Sbjct: 67 NDEIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLNG---KKIACLSYGSGPHIVLATTE 120
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
G ++ WG + QLG G T + L+P T N ++ V ACG H+LV
Sbjct: 121 GEVFTWGHNAYSQLGNG--TTNHGLVPCHISTNLSNKQVIEV-------ACGSYHSLVLT 171
Query: 362 RDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 395
DG + WGYN+ GQ + + P V C+
Sbjct: 172 SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCL 205
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 18/150 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G Q P A R +ACG+ HT + +G
Sbjct: 229 VYVWGYNGNGQLGLGNSGNQ--------PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 280
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WGAN +GQLG G + + +P V + ++ +C + T+A
Sbjct: 281 VYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSA--------AKTQGG 332
Query: 143 RLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 333 HVYMWGQCRGQSVILPHLTHFSCTDDVFAC 362
>gi|332241905|ref|XP_003270125.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Nomascus leucogenys]
Length = 556
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 111/227 (48%), Gaps = 22/227 (9%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H+V + G + WG+N Y QLG G T GL + + +++ +V+CG
Sbjct: 115 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN--------KQVIEVACGS 166
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHSC 296
YHS ++ +GEV+ WG + GQ+G S + +PRRV L + +ACG +
Sbjct: 167 YHSLVLTSDGEVFAWGYNNSGQVGS---GSTVNQPIPRRVTGCLQNKVVVTIACGQMCCM 223
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G +Y WG + GQLGLG + + R VQ VACG++H
Sbjct: 224 AVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR----------VQRVACGYAH 273
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 403
TLV +G+++ WG NSYGQ + YP+PV + ++AA
Sbjct: 274 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA 320
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 131/300 (43%), Gaps = 43/300 (14%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTAAIAEPRENDGTIS 140
+F G N G LG G + P ++ L + + +S G+ H A E
Sbjct: 72 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTE--------- 122
Query: 141 TSRLWVWGQNQGSNFPR---------LFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
++ WG N S N + +V+CGS H + L+ G + AW
Sbjct: 123 -GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAW 181
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
GYN GQ+G G T PR + G + + + ++CG+ AV + GEVY
Sbjct: 182 GYNNSGQVGSGSTVNQ-PIPRRVTG-------CLQNKVVVTIACGQMCCMAVVDTGEVYV 233
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG GQLG L + + P RV AL GI ++ VACG H+ LT +G +YAWG +
Sbjct: 234 WGYNGNGQLG---LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 290
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRIHGWG 370
GQLG G N+S+ + + +++ AC +HT + G ++ WG
Sbjct: 291 YGQLGTG----------NKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 113/243 (46%), Gaps = 39/243 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G +P + L +N + +++ACG H+ + SDG
Sbjct: 125 VFTWGHNAYSQLG-NGTTNHGLVPCHISTNL------SNKQVIEVACGSYHSLVLTSDGE 177
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P +V LQ++ V +I+CG C A+ + T
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAV---------VDT 228
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N N P A + +V+CG H + L++ G + AWG
Sbjct: 229 GEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 288
Query: 194 NEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G + + P + E ++I ++ +C H SAA ++ G VY
Sbjct: 289 NSYGQLGTGNKSNQSYPTPVTV-----------EKDRIIEIAACHSTHTSAAKTQGGHVY 337
Query: 251 TWG 253
WG
Sbjct: 338 MWG 340
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 72/154 (46%), Gaps = 19/154 (12%)
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHSCALTSK 301
N E++ G G LG +QS + PRR+ +L+G K +AC G H T++
Sbjct: 69 NDEIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLNG---KKIACLSYGSGPHIVLATTE 122
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
G ++ WG + QLG G T + L+P T N ++ V ACG H+LV
Sbjct: 123 GEVFTWGHNAYSQLGNG--TTNHGLVPCHISTNLSNKQVIEV-------ACGSYHSLVLT 173
Query: 362 RDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 395
DG + WGYN+ GQ + + P V C+
Sbjct: 174 SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCL 207
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 18/150 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G Q P A R +ACG+ HT + +G
Sbjct: 231 VYVWGYNGNGQLGLGNSGNQ--------PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 282
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WGAN +GQLG G + + +P V + ++ +C + T+A
Sbjct: 283 VYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSA--------AKTQGG 334
Query: 143 RLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 335 HVYMWGQCRGQSVILPHLTHFSCTDDVFAC 364
>gi|340368103|ref|XP_003382592.1| PREDICTED: hypothetical protein LOC100632986 [Amphimedon
queenslandica]
Length = 2287
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 120/249 (48%), Gaps = 22/249 (8%)
Query: 166 NTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAP 225
+TII +SCG H +ALS G L AWG N GQLG T + + P ++ P
Sbjct: 1326 DTIITSISCGVKHSLALSSDGSLYAWGDNSEGQLGLK-TLQPICKPSIL--------SLP 1376
Query: 226 ELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFI 285
+ Q +CG++H+ A++++G V++WG + QLGH + + L P ++ L +
Sbjct: 1377 FGRPVVQAACGDHHTLALTQDGRVFSWGKNTTSQLGHS--KGLSRVLAPTQITHLISTPV 1434
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
+ CG HS ALT G ++ WG ++ Q G G T S P ++ R
Sbjct: 1435 VKLICGSNHSAALTVSGGVFLWGDNRRAQCGFGHVTTKISY-PTLNEFMGR--------Y 1485
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAAN-EKSTYAWYPSPV-DWCVGEVRKLAA 403
V VACG HT+ ++ G I+ G N YGQ + P+P+ V+++
Sbjct: 1486 AVSHVACGTDHTVFQVQSGHIYTVGSNEYGQLGRGARGAVYSRPAPIMQLMTVVVQQVVC 1545
Query: 404 GGGHSAVLA 412
G H+ +LA
Sbjct: 1546 GRYHTTLLA 1554
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 135/302 (44%), Gaps = 55/302 (18%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++Y WG N GQ G K + + P + P G + ACG HT A+ DG
Sbjct: 1347 SLYAWGDNSEGQLGLKTLQPICK------PSILSLPFGRP--VVQAACGDHHTLALTQDG 1398
Query: 82 TLFTWGANEFGQLGDGTEEGRK-HPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+F+WG N QLG R P ++ L S V + CG++ +AA+ T+S
Sbjct: 1399 RVFSWGKNTTSQLGHSKGLSRVLAPTQITHLISTPVVKLICGSNHSAAL--------TVS 1450
Query: 141 TSRLWVWGQNQGS-----------NFPRL--FWGAFTPNTIICQVSCGSVHVVALSECGL 187
+++WG N+ + ++P L F G + + V+CG+ H V + G
Sbjct: 1451 GG-VFLWGDNRRAQCGFGHVTTKISYPTLNEFMGRYA----VSHVACGTDHTVFQVQSGH 1505
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE-N 246
+ G NEYGQLGRG P I + + QV CG YH+ +++
Sbjct: 1506 IYTVGSNEYGQLGRGARGAVYSRPAPIMQLMTVV--------VQQVVCGRYHTTLLAKYT 1557
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELL-------PRRVV----ALDGIFIKDVACGGVHS 295
G++ T+G G +GQLG+ + S ++ + P+R + + +K V GG H+
Sbjct: 1558 GDLITFGQGLMGQLGNGTTFSSEQSIPVMGRWSSPKRYLRSPRPANSNVVKGVFAGGNHT 1617
Query: 296 CA 297
A
Sbjct: 1618 FA 1619
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 150/362 (41%), Gaps = 46/362 (12%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLD---------IACGH 71
S ++ WG H G G +E+ + + P FG +D I+CG
Sbjct: 1279 SVMFCWGEAHDGALGLDVKEKCVM--EARPNTAFGDKKIKYIAHIDTFDDTIITSISCGV 1336
Query: 72 EHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
+H+ A++SDG+L+ WG N GQLG T + P + V +CG H T A+ +
Sbjct: 1337 KHSLALSSDGSLYAWGDNSEGQLGLKTLQPICKPSILSLPFGRPVVQAACGDHHTLALTQ 1396
Query: 132 PRENDGTISTSRLWVWGQNQGSNF--PRLFWGAFTPNTI-------ICQVSCGSVHVVAL 182
DG R++ WG+N S + P I + ++ CGS H AL
Sbjct: 1397 ----DG-----RVFSWGKNTTSQLGHSKGLSRVLAPTQITHLISTPVVKLICGSNHSAAL 1447
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
+ G + WG N Q G G + P + + ++ ++ V+CG H+
Sbjct: 1448 TVSGGVFLWGDNRRAQCGFGHVTTKISYPTLNEFMGRY--------AVSHVACGTDHTVF 1499
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS-K 301
++G +YT G GQLG + G P ++ L + ++ V CG H+ L
Sbjct: 1500 QVQSGHIYTVGSNEYGQLGRGA--RGAVYSRPAPIMQLMTVVVQQVVCGRYHTTLLAKYT 1557
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIP-----NESDTYFRNIPILVVPNGVQLVACGHSH 356
G L +G GQLG G S IP + Y R+ P N V+ V G +H
Sbjct: 1558 GDLITFGQGLMGQLGNGTTFSSEQSIPVMGRWSSPKRYLRS-PRPANSNVVKGVFAGGNH 1616
Query: 357 TL 358
T
Sbjct: 1617 TF 1618
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 101/223 (45%), Gaps = 37/223 (16%)
Query: 212 RVIKGYAKFLDEAPE------LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG---- 261
+V+K + F++ A L+ + ++ Y +S ++ WG G LG
Sbjct: 1241 KVLKEFLSFMNMASSGSTRSGLDSVQRILKFYYERNRLSV---MFCWGEAHDGALGLDVK 1297
Query: 262 -HCSLQS------GDKEL-LPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
C +++ GDK++ + D I ++CG HS AL+S G+LYAWG + G
Sbjct: 1298 EKCVMEARPNTAFGDKKIKYIAHIDTFDDTIITSISCGVKHSLALSSDGSLYAWGDNSEG 1357
Query: 314 QLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLVYMRDGRIHGWGY 371
QLGL ++ I S IL +P G +V ACG HTL +DGR+ WG
Sbjct: 1358 QLGL----KTLQPICKPS--------ILSLPFGRPVVQAACGDHHTLALTQDGRVFSWGK 1405
Query: 372 NSYGQAANEKS-TYAWYPSPVDWCVG-EVRKLAAGGGHSAVLA 412
N+ Q + K + P+ + + V KL G HSA L
Sbjct: 1406 NTTSQLGHSKGLSRVLAPTQITHLISTPVVKLICGSNHSAALT 1448
>gi|62088666|dbj|BAD92780.1| RCC1-like G exchanging factor RLG variant [Homo sapiens]
Length = 556
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 112/227 (49%), Gaps = 22/227 (9%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H+V + G + WG+N Y QLG G T GL + + +++ +V+CG
Sbjct: 115 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN--------KQVIEVACGS 166
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHSC 296
YHS ++ +GEV+ WG + GQ+G S + + +PRRV L + +ACG +
Sbjct: 167 YHSLVLTSDGEVFAWGYNNSGQVGSGSTVN---QPIPRRVTGCLQNKVVVTIACGQMCCM 223
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G +Y WG + GQLGLG + + R VQ VACG++H
Sbjct: 224 AVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR----------VQRVACGYAH 273
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 403
TLV +G+++ WG NSYGQ + YP+PV + ++AA
Sbjct: 274 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA 320
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 131/300 (43%), Gaps = 43/300 (14%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTAAIAEPRENDGTIS 140
+F G N G LG G + P ++ L + + +S G+ H A E
Sbjct: 72 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTE--------- 122
Query: 141 TSRLWVWGQNQGSNFPR---------LFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
++ WG N S N + +V+CGS H + L+ G + AW
Sbjct: 123 -GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAW 181
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
GYN GQ+G G T PR + G + + + ++CG+ AV + GEVY
Sbjct: 182 GYNNSGQVGSGSTVNQ-PIPRRVTG-------CLQNKVVVTIACGQMCCMAVVDTGEVYV 233
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG GQLG L + + P RV AL GI ++ VACG H+ LT +G +YAWG +
Sbjct: 234 WGYNGNGQLG---LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 290
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRIHGWG 370
GQLG G N+S+ + + +++ AC +HT + G ++ WG
Sbjct: 291 YGQLGTG----------NKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 113/243 (46%), Gaps = 39/243 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G +P + L +N + +++ACG H+ + SDG
Sbjct: 125 VFTWGHNAYSQLG-NGTTNHGLVPCHISTNL------SNKQVIEVACGSYHSLVLTSDGE 177
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P +V LQ++ V +I+CG C A+ + T
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAV---------VDT 228
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N N P A + +V+CG H + L++ G + AWG
Sbjct: 229 GEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 288
Query: 194 NEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G + + P + E ++I ++ +C H SAA ++ G VY
Sbjct: 289 NSYGQLGTGNKSNQSYPTPVTV-----------EKDRIIEIAACHSTHTSAAKTQGGHVY 337
Query: 251 TWG 253
WG
Sbjct: 338 MWG 340
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 72/154 (46%), Gaps = 19/154 (12%)
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHSCALTSK 301
N E++ G G LG +QS + PRR+ +L+G K +AC G H T++
Sbjct: 69 NDEIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLNG---KKIACLSYGSGPHIVLATTE 122
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
G ++ WG + QLG G T + L+P T N ++ V ACG H+LV
Sbjct: 123 GEVFTWGHNAYSQLGNG--TTNHGLVPCHISTNLSNKQVIEV-------ACGSYHSLVLT 173
Query: 362 RDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 395
DG + WGYN+ GQ + + P V C+
Sbjct: 174 SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCL 207
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 18/150 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G Q P A R +ACG+ HT + +G
Sbjct: 231 VYVWGYNGNGQLGLGNSGNQ--------PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 282
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WGAN +GQLG G + + +P V + ++ +C + T+A
Sbjct: 283 VYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSA--------AKTQGG 334
Query: 143 RLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 335 HVYMWGQCRGQSVILPHLTHFSCTDDVFAC 364
>gi|403303292|ref|XP_003942270.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Saimiri boliviensis boliviensis]
Length = 551
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 111/227 (48%), Gaps = 22/227 (9%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H+V + G + WG+N Y QLG G T GL + + +++ +V+CG
Sbjct: 110 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN--------KQVIEVACGS 161
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHSC 296
YHS ++ +GEV+ WG + GQ+G S + +PRRV L + +ACG +
Sbjct: 162 YHSLVLTSDGEVFAWGYNNSGQVGS---GSTINQPIPRRVTGCLQNKVVVTIACGQMCCM 218
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G +Y WG + GQLGLG + + R VQ VACG++H
Sbjct: 219 AVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR----------VQRVACGYAH 268
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 403
TLV +G+++ WG NSYGQ + YP+PV + ++AA
Sbjct: 269 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA 315
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 132/300 (44%), Gaps = 43/300 (14%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTAAIAEPRENDGTIS 140
+F G N G LG G + P ++ L + + +S G+ H A E
Sbjct: 67 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTE--------- 117
Query: 141 TSRLWVWGQNQGSNFPR---------LFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
++ WG N S N + +V+CGS H + L+ G + AW
Sbjct: 118 -GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAW 176
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
GYN GQ+G G T PR + G + + + ++CG+ AV ++GEVY
Sbjct: 177 GYNNSGQVGSGSTINQ-PIPRRVTG-------CLQNKVVVTIACGQMCCMAVVDSGEVYV 228
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG GQLG L + + P RV AL GI ++ VACG H+ LT +G +YAWG +
Sbjct: 229 WGYNGNGQLG---LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 285
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRIHGWG 370
GQLG G N+S+ + + +++ AC +HT + G ++ WG
Sbjct: 286 YGQLGTG----------NKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 113/243 (46%), Gaps = 39/243 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G +P + L +N + +++ACG H+ + SDG
Sbjct: 120 VFTWGHNAYSQLG-NGTTNHGLVPCHISTNL------SNKQVIEVACGSYHSLVLTSDGE 172
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P +V LQ++ V +I+CG C A+ + E
Sbjct: 173 VFAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGE------- 225
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N N P A + +V+CG H + L++ G + AWG
Sbjct: 226 --VYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 283
Query: 194 NEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G + + P + E ++I ++ +C H SAA ++ G VY
Sbjct: 284 NSYGQLGTGNKSNQSYPTPVTV-----------EKDRIIEIAACHSTHTSAAKTQGGHVY 332
Query: 251 TWG 253
WG
Sbjct: 333 MWG 335
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 71/154 (46%), Gaps = 19/154 (12%)
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHSCALTSK 301
N E++ G G LG +QS + PRR+ +L G K +AC G H T++
Sbjct: 64 NDEIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLSG---KKIACLSYGSGPHIVLATTE 117
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
G ++ WG + QLG G T + L+P T N ++ V ACG H+LV
Sbjct: 118 GEVFTWGHNAYSQLGNG--TTNHGLVPCHISTNLSNKQVIEV-------ACGSYHSLVLT 168
Query: 362 RDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 395
DG + WGYN+ GQ + + P V C+
Sbjct: 169 SDGEVFAWGYNNSGQVGSGSTINQPIPRRVTGCL 202
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 18/150 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G Q P A R +ACG+ HT + +G
Sbjct: 226 VYVWGYNGNGQLGLGNSGNQ--------PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 277
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WGAN +GQLG G + + +P V + ++ +C + T+A
Sbjct: 278 VYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSA--------AKTQGG 329
Query: 143 RLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 330 HVYMWGQCRGQSVILPHLTHFSCTDDVFAC 359
>gi|427797227|gb|JAA64065.1| Putative alpha-tubulin suppressor, partial [Rhipicephalus
pulchellus]
Length = 606
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 137/308 (44%), Gaps = 48/308 (15%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTAAIAEPRE 134
V D +F G+N G LG G G P KV L + + +++ G+ H A+ E E
Sbjct: 113 VTQDDDVFALGSNSSGCLGLGDTHGSLEPRKVDALCRKGIHALAYGSGPH-VLAVTESGE 171
Query: 135 NDGTISTSRLWVWGQN----QGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALS 183
L WG N G+N P++I + QV+CGS H +AL+
Sbjct: 172 ---------LLSWGHNGYCQLGNNCNT---QGLVPSSISAGLSHRVAQVACGSHHSLALT 219
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
G + AWG N GQ+G G T +V G + V+CG+ S AV
Sbjct: 220 TNGDVYAWGQNNCGQVGSGSTTNQPTPRKVSSGIGG--------RRCIGVACGQTSSMAV 271
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
ENGEV+ WG GQLG L + + P RV L G+ I V CG H+ AL+ +G
Sbjct: 272 MENGEVFGWGYNGNGQLG---LGNNVNQTSPCRVTNLQGVVIHKVVCGYAHTMALSDEGV 328
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH-TLVYMR 362
LY WG + GQLG G + S +D + V++ A ++H + V +
Sbjct: 329 LYTWGANSYGQLGTGNKANQVSPFKMPTD----------IGRIVEIAASHYNHISAVMTQ 378
Query: 363 DGRIHGWG 370
R++ WG
Sbjct: 379 TSRVYMWG 386
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 117/229 (51%), Gaps = 27/229 (11%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HV+A++E G L +WG+N Y QLG +GL + G + ++ QV+CG
Sbjct: 162 HVLAVTESGELLSWGHNGYCQLGNNCNTQGLVPSSISAGLS---------HRVAQVACGS 212
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHSC 296
+HS A++ NG+VY WG + GQ+G S + PR+V + + G VACG S
Sbjct: 213 HHSLALTTNGDVYAWGQNNCGQVGS---GSTTNQPTPRKVSSGIGGRRCIGVACGQTSSM 269
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G ++ WG + GQLGLG + S N+ +V+ V CG++H
Sbjct: 270 AVMENGEVFGWGYNGNGQLGLGNN------VNQTSPCRVTNLQGVVI----HKVVCGYAH 319
Query: 357 TLVYMRDGRIHGWGYNSYGQ--AANEKSTYAWYPSPVDWCVGEVRKLAA 403
T+ +G ++ WG NSYGQ N+ + + + P D +G + ++AA
Sbjct: 320 TMALSDEGVLYTWGANSYGQLGTGNKANQVSPFKMPTD--IGRIVEIAA 366
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 105/239 (43%), Gaps = 38/239 (15%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFT 85
WG+N Q G + L +P + AG + R +ACG H+ A+ ++G ++
Sbjct: 175 WGHNGYCQLGNNCNTQGL-VPSSIS-------AGLSHRVAQVACGSHHSLALTTNGDVYA 226
Query: 86 WGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTISTSRL 144
WG N GQ+G G+ + P KV + ++CG + A+ E E G
Sbjct: 227 WGQNNCGQVGSGSTTNQPTPRKVSSGIGGRRCIGVACGQTSSMAVMENGEVFG------- 279
Query: 145 WVWGQN------QGSNFPRLFWGAFT--PNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
WG N G+N + T +I +V CG H +ALS+ G+L WG N Y
Sbjct: 280 --WGYNGNGQLGLGNNVNQTSPCRVTNLQGVVIHKVVCGYAHTMALSDEGVLYTWGANSY 337
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH--SAAVSENGEVYTWG 253
GQLG G + ++ ++ +I +++ Y+ SA +++ VY WG
Sbjct: 338 GQLGTGNKANQVSPFKM----------PTDIGRIVEIAASHYNHISAVMTQTSRVYMWG 386
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 106/251 (42%), Gaps = 41/251 (16%)
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
H AV G L +WG N + QLG+ P + S V ++CG+H + A+
Sbjct: 162 HVLAVTESGELLSWGHNGYCQLGNNCNTQGLVPSSISAGLSHRVAQVACGSHHSLALT-- 219
Query: 133 RENDGTISTSRLWVWGQNQ------GSN----FPRLFWGAFTPNTIICQVSCGSVHVVAL 182
+ ++ WGQN GS PR I V+CG +A+
Sbjct: 220 -------TNGDVYAWGQNNCGQVGSGSTTNQPTPRKVSSGIGGRRCI-GVACGQTSSMAV 271
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRV--IKGYAKFLDEAPELEKITQVSCGEYHS 240
E G + WGYN GQLG G RV ++G I +V CG H+
Sbjct: 272 MENGEVFGWGYNGNGQLGLGNNVNQTSPCRVTNLQGVV-----------IHKVVCGYAHT 320
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGGVH-SCA 297
A+S+ G +YTWG S GQLG +G+K ++ P ++ G ++ A H S
Sbjct: 321 MALSDEGVLYTWGANSYGQLG-----TGNKANQVSPFKMPTDIGRIVEIAASHYNHISAV 375
Query: 298 LTSKGALYAWG 308
+T +Y WG
Sbjct: 376 MTQTSRVYMWG 386
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 18/131 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WGYN +GQ G Q P + + + CG+ HT A++ +G
Sbjct: 277 VFGWGYNGNGQLGLGNNVNQTS-----PCRVTNLQGVVIHK---VVCGYAHTMALSDEGV 328
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVK-SISCGAHCTAAIAEPRENDGTIST 141
L+TWGAN +GQLG G + + P K+ V+ + S H +A + + T
Sbjct: 329 LYTWGANSYGQLGTGNKANQVSPFKMPTDIGRIVEIAASHYNHISAVMTQ---------T 379
Query: 142 SRLWVWGQNQG 152
SR+++WGQ +G
Sbjct: 380 SRVYMWGQCRG 390
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 59/128 (46%), Gaps = 16/128 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG N+ GQ G G P+++ + G R + +ACG + AV +G
Sbjct: 224 VYAWGQNNCGQVG-SGSTTNQPTPRKVSSGIGG------RRCIGVACGQTSSMAVMENGE 276
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F WG N GQLG G + P +V LQ + + CG T A+++ +G
Sbjct: 277 VFGWGYNGNGQLGLGNNVNQTSPCRVTNLQGVVIHKVVCGYAHTMALSD----EGV---- 328
Query: 143 RLWVWGQN 150
L+ WG N
Sbjct: 329 -LYTWGAN 335
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 78/171 (45%), Gaps = 14/171 (8%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG-GVHSCALTSK 301
V+++ +V+ G S G LG L L PR+V AL I +A G G H A+T
Sbjct: 113 VTQDDDVFALGSNSSGCLG---LGDTHGSLEPRKVDALCRKGIHALAYGSGPHVLAVTES 169
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
G L +WG + QLG T+ L+P+ + + V VACG H+L
Sbjct: 170 GELLSWGHNGYCQLGNNCNTQG--LVPSSISAG--------LSHRVAQVACGSHHSLALT 219
Query: 362 RDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
+G ++ WG N+ GQ + +T P V +G R + G ++ +A
Sbjct: 220 TNGDVYAWGQNNCGQVGSGSTTNQPTPRKVSSGIGGRRCIGVACGQTSSMA 270
>gi|297598384|ref|NP_001045490.2| Os01g0964800 [Oryza sativa Japonica Group]
gi|255674106|dbj|BAF07404.2| Os01g0964800, partial [Oryza sativa Japonica Group]
Length = 496
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 178/418 (42%), Gaps = 50/418 (11%)
Query: 15 DNIPAKSAIYVWGY---NHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGH 71
D+ + +YVWG ++S +TG R L P+ ++ +D CG
Sbjct: 29 DDCDSSGDVYVWGEVICDNSVRTGSDTVVRSTVRTDVLRPKPLESNLVLDAYHVD--CGV 86
Query: 72 EHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
+H+A V +G +FTWG G+LG G+ E HP ++ L V ++CG T A+
Sbjct: 87 KHSALVTKNGEVFTWGEESGGRLGHGSREDSIHPRLIESLAVCNVDIVACGEFHTCAVTT 146
Query: 132 PRE----NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
E DGT + L G++ P+ GA + VSCG+ H ++ G
Sbjct: 147 AGELYTWGDGTHNVGLLG-HGKDVSHWIPKRIAGAL-EGLAVAYVSCGTWHTALITTMGQ 204
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE-- 245
L +G +G LG G E + P+ ++ + K V+CG +H+AA+ E
Sbjct: 205 LFTFGDGTFGVLGHGNR-ESISCPKEVESLSGL--------KTISVACGVWHTAAIVEVI 255
Query: 246 ---------NGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVH 294
+G+++TWG G +LGH GDKE L P V +L +ACG
Sbjct: 256 VTQSSSSISSGKLFTWGDGDKHRLGH-----GDKEPRLKPTCVASLIDYDFHRIACGHSL 310
Query: 295 SCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGH 354
+ LT+ G + + G + GQLG RS IP + +V V VACG
Sbjct: 311 TVGLTTSGKVLSMGNTVYGQLG---NPRSDGKIPCLVEE--------IVGENVVQVACGS 359
Query: 355 SHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 411
H V + WG + G+ + P+ V+ VR +A G +A +
Sbjct: 360 YHVAVLTIKSEVFTWGKGANGRLGHGDIEDRKIPTLVEALRDRSVRHIACGANFTAAI 417
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 60/121 (49%), Gaps = 16/121 (13%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
+ +ACG H A + +FTWG G+LG G E RK P V+ L+ V+ I+CGA+
Sbjct: 353 VQVACGSYHVAVLTIKSEVFTWGKGANGRLGHGDIEDRKIPTLVEALRDRSVRHIACGAN 412
Query: 125 CTAAIAEPRENDGTISTSRLWVWG--QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVAL 182
TAAI + + WV G Q+Q ++ + F FT C +CG VH A
Sbjct: 413 FTAAICQHK-----------WVSGAEQSQCASCRQPF--GFTRKRHNCH-NCGLVHCNAC 458
Query: 183 S 183
+
Sbjct: 459 T 459
>gi|4079811|gb|AAD08658.1| Herc2 [Mus musculus]
Length = 4836
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 177/410 (43%), Gaps = 65/410 (15%)
Query: 20 KSAIYVWGYNHSGQTG-RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
++ ++VWG N Q G KG + ++ P + N + +A G + AV
Sbjct: 2959 RTKVFVWGLNDKDQLGGLKGSKIKV-------PSFSETLSALNV--VQVAGGSKSLFAVT 3009
Query: 79 SDGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRE 134
+G +++ G G+LG G G P ++ L S VK ++ G H TA
Sbjct: 3010 VEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV---- 3065
Query: 135 NDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSE 184
DG +++ WG+ PRL T I ++ GS H L+
Sbjct: 3066 -DG-----KVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKR--IRDIAYGSSHSAPLTS 3117
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAA 242
G L WG EYG+LG G L+ P+++K ++ QV+CG + + A
Sbjct: 3118 SGELYTWGLGEYGRLGHGDNTTQLK-PKMVKVLLG--------HRVIQVACGSRDAQTLA 3168
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
+++ G V++WG G G+LG + + +P+ + L+G + + CG S ALT G
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTKSG 3225
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLVY 360
++ WG +LG G SD + R ++ G ++V A G H L
Sbjct: 3226 VVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3273
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
G+++ WG N +GQ N +T P+ V G+ + ++A G HS
Sbjct: 3274 TDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3323
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 144/327 (44%), Gaps = 50/327 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +D+A G H+A V + G
Sbjct: 4062 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRGIEV--VDVAAGGAHSACVTAAGD 4113
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG E + P+ V+ LQ V I+CG+ + +D T+
Sbjct: 4114 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLC--LTDDDTV--- 4168
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 4169 --WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4226
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 4227 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4277
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G + VACG H+ AW S+
Sbjct: 4278 NDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAWSTSKPAS 4325
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPIL 341
G P + +P E + + + IPI+
Sbjct: 4326 AGKLP-----AQVPMEYN-HLQEIPII 4346
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 133/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIA G H+A + S G
Sbjct: 3069 VFSWG---EGDDGKLGHFSRMNCDK---PRLIQ--ALKTKRIRDIAYGSSHSAPLTSSGE 3120
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 3121 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 3173
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 3174 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3230
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV+++G+VY
Sbjct: 3231 GKGDYFRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDSGQVYA 3281
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3282 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3327
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 163/357 (45%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 3008 VTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQI-----TALSSYVVKKVAVHSGGRHATA 3062
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+ G+ +A +
Sbjct: 3063 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLT------ 3116
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 3117 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3170
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 3171 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 3221
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH S K P+ V L G I VA G +H A+T G
Sbjct: 3222 TKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDSGQ 3278
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 3279 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3325
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 129/276 (46%), Gaps = 25/276 (9%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N P+L G + N + H +AL+ G + +WG + G+LG G
Sbjct: 472 RVYTQAYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG 531
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P+VI ++ + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 532 DTVP-LEEPKVISAFSG----KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 586
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + E +P V L G+ + DVACG + A+T G +++WG G+LG G
Sbjct: 587 ---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 643
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D V V CG ++ +DG+++ WG +
Sbjct: 644 DGCKTPKLIEKLQDL------------DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 691
Query: 379 NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ + YP ++ G +V +AAG H VL +
Sbjct: 692 HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTE 727
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 174/411 (42%), Gaps = 76/411 (18%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P C A A R + + G + AV +DG
Sbjct: 3956 IYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALATLRPVQLIGGEQTLFAVTADG 4006
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 4007 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE------- 4059
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG+ + PR+ + V+ G H ++ G L
Sbjct: 4060 ---GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAGDL 4114
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSEN 246
WG YG+LG + + L+ P+++ EA + ++ ++C G+ + ++++
Sbjct: 4115 YTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVIDIACGSGDAQTLCLTDD 4165
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4166 DTVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 4222
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTL 358
WG +LG G SD + R P VQ +A G H +
Sbjct: 4223 WGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCV 4264
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
DG ++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4265 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4315
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 134/310 (43%), Gaps = 53/310 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHC 125
+ G +H A++S+G +++WG E G+LG G P ++ L+ E V + GAH
Sbjct: 4046 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4105
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCG 175
A L+ WG+ + P+L A + +I ++CG
Sbjct: 4106 ACVTA----------AGDLYTWGKGRYGRLGHSDSEDQLKPKLV-EALQGHRVI-DIACG 4153
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + L++ + +WG +YG+LGRG +G + P I + +V
Sbjct: 4154 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVKV 4204
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G VYTWG G +LGH S D PR+V L G + +A G +
Sbjct: 4205 ECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSL 4261
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLV 350
H T G +Y WG + GQLG G T P LV V V
Sbjct: 4262 HCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRV 4308
Query: 351 ACGHSHTLVY 360
ACG +HTL +
Sbjct: 4309 ACGSAHTLAW 4318
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 120/253 (47%), Gaps = 30/253 (11%)
Query: 134 ENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N +GS + + QV+ GS + A++
Sbjct: 2953 ESTATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + + G G+LG G++ + PR I + ++ K V G H+ A++
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYV------VKKVAVHSGGRHATALTV 3065
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+A G HS LTS G LY
Sbjct: 3066 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIQALKTKRIRDIAYGSSHSAPLTSSGELY 3122
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRD 363
WG + G+LG G T + + +L+ +Q VACG + TL +
Sbjct: 3123 TWGLGEYGRLGHGDNTTQLKP---------KMVKVLLGHRVIQ-VACGSRDAQTLALTDE 3172
Query: 364 GRIHGWGYNSYGQ 376
G + WG +G+
Sbjct: 3173 GLVFSWGDGDFGK 3185
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 131/285 (45%), Gaps = 45/285 (15%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+L A N + H A+A+ G +++WG + G+LG G + P+ +
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVI 542
Query: 109 KQLQ----SEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT 164
+ V I+CG+ +AAI E L+ WG+ N+ RL G+
Sbjct: 543 SAFSGKQAGKHVVHIACGSTYSAAITAEGE---------LYTWGRG---NYGRLGHGSSE 590
Query: 165 PNTI-----------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
I + V+CGS +A++E G + +WG +YG+LGRG +G + P
Sbjct: 591 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTP 649
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
++I+ + +V CG S A++++G+VY+WG G +LGH G +E
Sbjct: 650 KLIEKLQDL--------DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH-----GTEE 696
Query: 272 LL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ P+ + L G + DVA G H LT +++WG + Q
Sbjct: 697 HVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSNDQCQ 741
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 133/294 (45%), Gaps = 35/294 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG G+ G G L PK + G AG + + IACG ++AA
Sbjct: 511 LAATGEVYSWGCGDGGRLGH-GDTVPLEEPKVIS-AFSGKQAGKHV--VHIACGSTYSAA 566
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E P V L+ V ++CG+ +A
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA------ 620
Query: 137 GTISTSRLWVWGQ----------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
++W WG + G P+L + I +V CGS +AL++ G
Sbjct: 621 -VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVI--KVRCGSQFSIALTKDG 677
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ +WG + +LG G T E ++ P++++G + +K+ V+ G H ++E+
Sbjct: 678 QVYSWGKGDNQRLGHG-TEEHVRYPKLLEGL--------QGKKVIDVAAGSTHCLVLTED 728
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
EV++W GS Q H G + P LD I +ACG S A +S
Sbjct: 729 SEVHSW--GSNDQCQHFD-TLGVTKPEPTAFPGLDSKHIVGIACGPAQSFAWSS 779
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 98/212 (46%), Gaps = 28/212 (13%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ ++CGS + A++ G L WG YG+LG G + E P ++ G
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-SSEDEAIPMLVAGLKGL-------- 604
Query: 229 KITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
K+ V+CG + + AV+ENG+V++WG G G+LG D P+ + L + +
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR---GGSDGCKTPKLIEKLQDLDVI 661
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
V CG S ALT G +Y+WG +LG G ++ + R +L G
Sbjct: 662 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG------------TEEHVRYPKLLEGLQG 709
Query: 347 VQL--VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
++ VA G +H LV D +H WG N Q
Sbjct: 710 KKVIDVAAGSTHCLVLTEDSEVHSWGSNDQCQ 741
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 100/219 (45%), Gaps = 46/219 (21%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ QV+C + LS G + YN + P++++G A + +
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNS-----------DMLAPQLVQGLA-----SRNIV 497
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI--- 283
KI S G +H A++ GEVY+WG G G+LGH GD L P+ + A G
Sbjct: 498 KIAAHSDG-HHYLALAATGEVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAG 551
Query: 284 -FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
+ +ACG +S A+T++G LY WG G+LG G + IP+LV
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-------------SSEDEAIPMLV 598
Query: 343 V-PNGVQL--VAC--GHSHTLVYMRDGRIHGWGYNSYGQ 376
G+++ VAC G + TL +G++ WG YG+
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 110/281 (39%), Gaps = 69/281 (24%)
Query: 186 GLLQAWGYNEYGQLGRGI---------TCEGLQGPRVIK--------------------G 216
G + WG+N GQLG GI CE L R ++ G
Sbjct: 3954 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4012
Query: 217 Y----------AKFLDEAPELEKITQ-------VSCGEYHSAAVSENGEVYTWGLGSVGQ 259
Y + + LE I V+ G H A+S GEVY+WG G+
Sbjct: 4013 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4072
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LGH + D+ PR + +L GI + DVA GG HS +T+ G LY WG + G+LG
Sbjct: 4073 LGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG--- 4126
Query: 320 QTRSFSLIPNESDTYFRNIPILVVP---NGVQLVAC--GHSHTLVYMRDGRIHGWGYNSY 374
SD+ + P LV + V +AC G + TL D + WG Y
Sbjct: 4127 ----------HSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDY 4176
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADA 414
G+ S P +D G V K+ G S L +
Sbjct: 4177 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4217
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG + G G + +R P+Q+ + + IA G H DG
Sbjct: 4219 AVYTWGKGDYHRLGH-GSDDHVRRPRQVQ-------GLQGKKVIAIATGSLHCVCCTEDG 4270
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
++TWG N+ GQLGDGT + P V LQ + V ++CG+ T A
Sbjct: 4271 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4317
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 83/224 (37%), Gaps = 39/224 (17%)
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G+ Y + I CEGL V+ QV+C E +S NG VYT
Sbjct: 433 GWKYYANVIGPIQCEGLASLGVM-----------------QVACAEKRFLILSRNGRVYT 475
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWGG 309
S L P+ V L I +A G H AL + G +Y+WG
Sbjct: 476 QAYNS-------------DMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGC 522
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGW 369
G+LG G +P E V +ACG +++ +G ++ W
Sbjct: 523 GDGGRLGHG------DTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTW 576
Query: 370 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLA 412
G +YG+ + S P V G +V +A G G + LA
Sbjct: 577 GRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 620
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 82/218 (37%), Gaps = 62/218 (28%)
Query: 246 NGEVYTWGLGSVGQLG--------------------HCSLQSGDKELL------------ 273
+G +Y WG GQLG L G++ L
Sbjct: 3953 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4012
Query: 274 -----------------PRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWGGSQAGQ 314
P + ++ +FIK VA GG H AL+S+G +Y+WG ++ G+
Sbjct: 4013 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4072
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LG G RS P ++ R I ++ VA G +H+ G ++ WG Y
Sbjct: 4073 LGHG--NRSPCDRPRVIES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRY 4122
Query: 375 GQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
G+ + S P V+ G V +A G G + L
Sbjct: 4123 GRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTL 4160
>gi|397480406|ref|XP_003811475.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2 [Pan
paniscus]
gi|426375451|ref|XP_004054552.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 3
[Gorilla gorilla gorilla]
gi|194376922|dbj|BAG63022.1| unnamed protein product [Homo sapiens]
Length = 556
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 111/227 (48%), Gaps = 22/227 (9%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H+V + G + WG+N Y QLG G T GL + + +++ +V+CG
Sbjct: 115 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN--------KQVIEVACGS 166
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHSC 296
YHS ++ +GEV+ WG + GQ+G S + +PRRV L + +ACG +
Sbjct: 167 YHSLVLTSDGEVFAWGYNNSGQVGS---GSTVNQPIPRRVTGCLQNKVVVTIACGQMCCM 223
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G +Y WG + GQLGLG + + R VQ VACG++H
Sbjct: 224 AVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR----------VQRVACGYAH 273
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 403
TLV +G+++ WG NSYGQ + YP+PV + ++AA
Sbjct: 274 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA 320
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 131/300 (43%), Gaps = 43/300 (14%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTAAIAEPRENDGTIS 140
+F G N G LG G + P ++ L + + +S G+ H A E
Sbjct: 72 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTE--------- 122
Query: 141 TSRLWVWGQNQGSNFPR---------LFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
++ WG N S N + +V+CGS H + L+ G + AW
Sbjct: 123 -GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAW 181
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
GYN GQ+G G T PR + G + + + ++CG+ AV + GEVY
Sbjct: 182 GYNNSGQVGSGSTVNQ-PIPRRVTG-------CLQNKVVVTIACGQMCCMAVVDTGEVYV 233
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG GQLG L + + P RV AL GI ++ VACG H+ LT +G +YAWG +
Sbjct: 234 WGYNGNGQLG---LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 290
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRIHGWG 370
GQLG G N+S+ + + +++ AC +HT + G ++ WG
Sbjct: 291 YGQLGTG----------NKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 113/243 (46%), Gaps = 39/243 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G +P + L +N + +++ACG H+ + SDG
Sbjct: 125 VFTWGHNAYSQLG-NGTTNHGLVPCHISTNL------SNKQVIEVACGSYHSLVLTSDGE 177
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P +V LQ++ V +I+CG C A+ + T
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAV---------VDT 228
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N N P A + +V+CG H + L++ G + AWG
Sbjct: 229 GEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 288
Query: 194 NEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G + + P + E ++I ++ +C H SAA ++ G VY
Sbjct: 289 NSYGQLGTGNKSNQSYPTPVTV-----------EKDRIIEIAACHSTHTSAAKTQGGHVY 337
Query: 251 TWG 253
WG
Sbjct: 338 MWG 340
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 72/154 (46%), Gaps = 19/154 (12%)
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHSCALTSK 301
N E++ G G LG +QS + PRR+ +L+G K +AC G H T++
Sbjct: 69 NDEIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLNG---KKIACLSYGSGPHIVLATTE 122
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
G ++ WG + QLG G T + L+P T N ++ V ACG H+LV
Sbjct: 123 GEVFTWGHNAYSQLGNG--TTNHGLVPCHISTNLSNKQVIEV-------ACGSYHSLVLT 173
Query: 362 RDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 395
DG + WGYN+ GQ + + P V C+
Sbjct: 174 SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCL 207
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 18/150 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G Q P A R +ACG+ HT + +G
Sbjct: 231 VYVWGYNGNGQLGLGNSGNQ--------PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 282
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WGAN +GQLG G + + +P V + ++ +C + T+A
Sbjct: 283 VYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSA--------AKTQGG 334
Query: 143 RLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 335 HVYMWGQCRGQSVILPHLTHFSCTDDVFAC 364
>gi|324502986|gb|ADY41305.1| E3 ubiquitin-protein ligase HERC4 [Ascaris suum]
Length = 1038
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 170/398 (42%), Gaps = 56/398 (14%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRER--QLRIPKQLPPELFGCPA---GANSRWLDIACGHEH 73
+ +Y +GY GQ G +G I K P + G P G + R IA G H
Sbjct: 23 VRRQLYAFGYGGDGQLGNRGFLNGDDGNIVKT-PQVVVGAPTSHDGVSVR--AIATGERH 79
Query: 74 TAAVASDGTLFTWGANEFGQLGDG-TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
T +A DG +++ G+NE G+LG G +EG V + I+ G A+A+
Sbjct: 80 TLFLADDGKVWSCGSNENGELGRGGCQEGSFTIYPVLLSGGVNIVQIAAGRAHNMAVAD- 138
Query: 133 RENDGTISTSRLWVWGQNQGSNF--PRLFWGAFTPNTII-----CQVSCGSVHVVALSEC 185
DG RL+ WG N P P ++ QV+CG+ H +A+ E
Sbjct: 139 ---DG-----RLFAWGSNSHGQLALPSNITSTDIPKRVVSLTETVQVACGTDHTIAIVES 190
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + WG G++ L P+ I+ + + QV+ G + A++
Sbjct: 191 GRIFVWGLQPDGRV--------LYAPKEIEFFMAL--------PVVQVNAGSDYYVALTV 234
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKE-LLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
+G ++ WG GQLG S +KE P V L + + VACG H+ ALT +G L
Sbjct: 235 SGAMFVWGSNEYGQLG----TSDNKERTTPAEVTTLHSLNVVHVACGHSHTVALTHEGRL 290
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 364
+ G GQLG G + S + + ++ ++ V VACG HTL + G
Sbjct: 291 FVCGSDSCGQLGSGRKVPSQNTMLAVTE---------MLGTHVTRVACGRCHTLA-LAGG 340
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLA 402
+++ +G NS GQ + P P+D V A
Sbjct: 341 KMYAFGLNSSGQLGSGNVRSQVTPRPIDALTDVVSVFA 378
>gi|426375449|ref|XP_004054551.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 2
[Gorilla gorilla gorilla]
Length = 527
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 111/227 (48%), Gaps = 22/227 (9%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H+V + G + WG+N Y QLG G T GL + + +++ +V+CG
Sbjct: 86 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN--------KQVIEVACGS 137
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHSC 296
YHS ++ +GEV+ WG + GQ+G S + +PRRV L + +ACG +
Sbjct: 138 YHSLVLTSDGEVFAWGYNNSGQVGS---GSTVNQPIPRRVTGCLQNKVVVTIACGQMCCM 194
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G +Y WG + GQLGLG + + R VQ VACG++H
Sbjct: 195 AVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR----------VQRVACGYAH 244
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 403
TLV +G+++ WG NSYGQ + YP+PV + ++AA
Sbjct: 245 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA 291
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 131/300 (43%), Gaps = 43/300 (14%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTAAIAEPRENDGTIS 140
+F G N G LG G + P ++ L + + +S G+ H A E
Sbjct: 43 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTE--------- 93
Query: 141 TSRLWVWGQNQGSNFPR---------LFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
++ WG N S N + +V+CGS H + L+ G + AW
Sbjct: 94 -GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAW 152
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
GYN GQ+G G T PR + G + + + ++CG+ AV + GEVY
Sbjct: 153 GYNNSGQVGSGSTVNQ-PIPRRVTG-------CLQNKVVVTIACGQMCCMAVVDTGEVYV 204
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG GQLG L + + P RV AL GI ++ VACG H+ LT +G +YAWG +
Sbjct: 205 WGYNGNGQLG---LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 261
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRIHGWG 370
GQLG G N+S+ + + +++ AC +HT + G ++ WG
Sbjct: 262 YGQLGTG----------NKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 113/243 (46%), Gaps = 39/243 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G +P + L +N + +++ACG H+ + SDG
Sbjct: 96 VFTWGHNAYSQLG-NGTTNHGLVPCHISTNL------SNKQVIEVACGSYHSLVLTSDGE 148
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P +V LQ++ V +I+CG C A+ + T
Sbjct: 149 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAV---------VDT 199
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N N P A + +V+CG H + L++ G + AWG
Sbjct: 200 GEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 259
Query: 194 NEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G + + P + E ++I ++ +C H SAA ++ G VY
Sbjct: 260 NSYGQLGTGNKSNQSYPTPVTV-----------EKDRIIEIAACHSTHTSAAKTQGGHVY 308
Query: 251 TWG 253
WG
Sbjct: 309 MWG 311
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 72/154 (46%), Gaps = 19/154 (12%)
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHSCALTSK 301
N E++ G G LG +QS + PRR+ +L+G K +AC G H T++
Sbjct: 40 NDEIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLNG---KKIACLSYGSGPHIVLATTE 93
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
G ++ WG + QLG G T + L+P T N ++ V ACG H+LV
Sbjct: 94 GEVFTWGHNAYSQLGNG--TTNHGLVPCHISTNLSNKQVIEV-------ACGSYHSLVLT 144
Query: 362 RDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 395
DG + WGYN+ GQ + + P V C+
Sbjct: 145 SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCL 178
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 18/150 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G Q P A R +ACG+ HT + +G
Sbjct: 202 VYVWGYNGNGQLGLGNSGNQ--------PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 253
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WGAN +GQLG G + + +P V + ++ +C + T+A
Sbjct: 254 VYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSA--------AKTQGG 305
Query: 143 RLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 306 HVYMWGQCRGQSVILPHLTHFSCTDDVFAC 335
>gi|15233306|ref|NP_191117.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|7076801|emb|CAB75916.1| Regulator of chromosome condensation-like protein [Arabidopsis
thaliana]
gi|332645883|gb|AEE79404.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 488
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 157/373 (42%), Gaps = 60/373 (16%)
Query: 38 GRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANE------- 90
G+ + P LPPE+ C A + W H AV + ++TWG E
Sbjct: 102 GKHGETPEPFPLPPEV--CVQKAEAGW-------AHCVAVTENQQVYTWGWRECIPTGRV 152
Query: 91 FGQL-GDGTEEGRKHP-EKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWG 148
FGQ+ GD E E+V S + IS S+
Sbjct: 153 FGQVDGDSCERNISFSTEQVSSSSQGKKSSGGTSSQVEGRGGGEPTKKRRISPSKQAAEN 212
Query: 149 QNQGSN-----FPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGI 203
+Q N P L + P I V+ G H +ALS+ G + WGY GQLG G
Sbjct: 213 SSQSDNIDLSALPCLV--SLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS 270
Query: 204 TCEGLQGPRVI-----KGYAKFLDEAPELEKITQ-----------VSCGEYHSAAVSENG 247
+ P I Y K + + Q ++CG HSA +++ G
Sbjct: 271 RVRLVSSPHPIPCIEPSSYGKATSSGVNMSSVVQCGRVLGSYVKKIACGGRHSAVITDTG 330
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
+ T+G G GQ C S D EL P V +L GI I++VA G H+ +S G +YA+
Sbjct: 331 ALLTFGWGLYGQ---CGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAF 387
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN----GVQLVACGHSHTLVYMRD 363
GG+Q GQLG G ++++T + +L PN V+ ++CG HT V +
Sbjct: 388 GGNQFGQLGTG---------CDQAETLPK---LLEAPNLENVNVKTISCGARHTAVITDE 435
Query: 364 GRIHGWGYNSYGQ 376
GR+ WG+N YGQ
Sbjct: 436 GRVFCWGWNKYGQ 448
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 133/301 (44%), Gaps = 57/301 (18%)
Query: 63 RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG 122
R + +A G HT A++ G ++ WG GQLG G+ +V+ + S I C
Sbjct: 235 RIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS--------RVRLVSSPH--PIPC- 283
Query: 123 AHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVAL 182
EP S+ G N + + + +++CG H +
Sbjct: 284 -------IEPSSYGKATSS----------GVNMSSVVQCGRVLGSYVKKIACGGRHSAVI 326
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
++ G L +G+ YGQ G+G T + L P + +I +V+ G +H+
Sbjct: 327 TDTGALLTFGWGLYGQCGQGSTDDELS-PTCVSSLLGI--------RIEEVAAGLWHTTC 377
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA--LDGIFIKDVACGGVHSCALTS 300
S +G+VY +G GQLG Q+ E LP+ + A L+ + +K ++CG H+ +T
Sbjct: 378 ASSDGDVYAFGGNQFGQLGTGCDQA---ETLPKLLEAPNLENVNVKTISCGARHTAVITD 434
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIP--ILVVPNGVQLVACGHSHTL 358
+G ++ WG ++ GQLG+G D RN P + + + +ACG HTL
Sbjct: 435 EGRVFCWGWNKYGQLGIG-------------DVIDRNAPAEVRIKDCFPKNIACGWWHTL 481
Query: 359 V 359
+
Sbjct: 482 L 482
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 99/241 (41%), Gaps = 38/241 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLP---PELFG--------------CPAGANSRWL 65
++ WGY GQ G R R + P +P P +G C S
Sbjct: 255 VWGWGYGGEGQLGLGSRVRLVSSPHPIPCIEPSSYGKATSSGVNMSSVVQCGRVLGSYVK 314
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA-H 124
IACG H+A + G L T+G +GQ G G+ + P V L ++ ++ G H
Sbjct: 315 KIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWH 374
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQ-----NQGSNFPRLFWGAFTPNTIICQVSCGSVHV 179
T A +DG + +GQ +Q P+L N + +SCG+ H
Sbjct: 375 TTCA-----SSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPNLENVNVKTISCGARHT 429
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
+++ G + WG+N+YGQLG G + R + D P+ ++CG +H
Sbjct: 430 AVITDEGRVFCWGWNKYGQLGIGDVID-----RNAPAEVRIKDCFPK-----NIACGWWH 479
Query: 240 S 240
+
Sbjct: 480 T 480
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 7/110 (6%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y +G N GQ G G ++ +PK L P N I+CG HTA + +G
Sbjct: 384 VYAFGGNQFGQLG-TGCDQAETLPK-----LLEAPNLENVNVKTISCGARHTAVITDEGR 437
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
+F WG N++GQLG G R P +V+ ++ F K+I+CG T + +P
Sbjct: 438 VFCWGWNKYGQLGIGDVIDRNAPAEVR-IKDCFPKNIACGWWHTLLLGQP 486
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 156/419 (37%), Gaps = 97/419 (23%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIA---CGHEH 73
+ ++ +Y+WGY G Q R P P E+ P S W D++ CG
Sbjct: 27 VVSQRVVYMWGY-------LPGASPQ-RSPLMSPVEV-KIPPAVESSWKDVSGGGCGF-- 75
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
A A G L TWG+ + LG KH E EP
Sbjct: 76 AMATAESGKLITWGSTD--DLGQSYVTSGKHGET----------------------PEP- 110
Query: 134 ENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
FP P + + G H VA++E + WG+
Sbjct: 111 ---------------------FP------LPPEVCVQKAEAGWAHCVAVTENQQVYTWGW 143
Query: 194 NEYGQLGR------GITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
E GR G +CE R I + + + + +K + + + E
Sbjct: 144 RECIPTGRVFGQVDGDSCE-----RNISFSTEQVSSSSQGKKSSGGTSSQVEGRGGGEPT 198
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKEL--LPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+ + Q S QS + +L LP V G+ I VA GG H+ AL+ G ++
Sbjct: 199 KKRR--ISPSKQAAENSSQSDNIDLSALPCLVSLAPGVRIVSVAAGGRHTLALSDIGQVW 256
Query: 306 AWGGSQAGQLGLGPQTRSFS---LIP-NESDTYFR------NIPILV-----VPNGVQLV 350
WG GQLGLG + R S IP E +Y + N+ +V + + V+ +
Sbjct: 257 GWGYGGEGQLGLGSRVRLVSSPHPIPCIEPSSYGKATSSGVNMSSVVQCGRVLGSYVKKI 316
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
ACG H+ V G + +G+ YGQ + P+ V +G + ++AAG H+
Sbjct: 317 ACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHT 375
>gi|302804446|ref|XP_002983975.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
gi|300148327|gb|EFJ14987.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
Length = 435
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 159/360 (44%), Gaps = 65/360 (18%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
A+ ++VWG G+ G Q + + P + R + G H A+
Sbjct: 102 AEQDVFVWGKGDGGRLGIDTEFNQYK--PYVNPRI--------KRVQMASAGGLHNIALT 151
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
G ++TWG FG LG G+ E P ++ + + +S G +AA+ E E
Sbjct: 152 EVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHSAAVTESGE---- 207
Query: 139 ISTSRLWVWGQNQGS------NFPRLFWGAFT-PNTI------ICQVSCGSVHVVALSEC 185
L+ WG+++G N + GA + P + I V CG +AL++
Sbjct: 208 -----LYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDVPIASVYCGGFFTMALTKS 262
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G L +WG N +LG G + P+V+ A E + QV+CG +H+AA+++
Sbjct: 263 GQLWSWGGNANHELGHGTRANNWK-PKVVA--------ALEDVTLVQVACGGFHAAALTQ 313
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V TWG G GQLGH +L++G + P V A+ +ACG + A+T G LY
Sbjct: 314 DGKVITWGYGGNGQLGHGTLENGKE---PAIVEAMADKTCTYIACGPAWTAAITENGDLY 370
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV---------VPNGVQLVACGHSH 356
WG ++ QLG IP D P+LV P V V+CG +H
Sbjct: 371 TWGKNRDYQLG----------IPGLKDEQLD--PVLVQFPQALHEKTPVEVLGVSCGANH 418
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 101/316 (31%), Positives = 153/316 (48%), Gaps = 47/316 (14%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAI-AEPRENDGTIS- 140
++ WG GQ+G G+E+ K P + L+ + + + A + A+PR + ++
Sbjct: 37 VWAWGRGTHGQVGHGSEDTEKLPVLISTLK---LAAFTGMAPIQGRMPAKPRLGNVGVTC 93
Query: 141 ---------TSRLWVWGQNQGSNF-PRLFWGAFTP--NTIICQV---SCGSVHVVALSEC 185
++VWG+ G + + P N I +V S G +H +AL+E
Sbjct: 94 GLFHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKPYVNPRIKRVQMASAGGLHNIALTEV 153
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + WGY +G LG G + E PR+++G P ++I VS G HSAAV+E
Sbjct: 154 GNVYTWGYGAFGALGHG-SYERELLPRLLEG--------PWKDRIVHVSAGGSHSAAVTE 204
Query: 246 NGEVYTWGLGS-VGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKG 302
+GE+YTWG G+LGH + D+ L P +V ALD + I V CGG + ALT G
Sbjct: 205 SGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALD-VPIASVYCGGFFTMALTKSG 263
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLVY 360
L++WGG+ +LG G TR+ + P ++ V LV ACG H
Sbjct: 264 QLWSWGGNANHELGHG--TRANNWKPK----------VVAALEDVTLVQVACGGFHAAAL 311
Query: 361 MRDGRIHGWGYNSYGQ 376
+DG++ WGY GQ
Sbjct: 312 TQDGKVITWGYGGNGQ 327
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 162/386 (41%), Gaps = 73/386 (18%)
Query: 18 PAKSAIYVWGYNHSGQTGRKGRERQLRIP-----------KQLPPELFGCPAGANSRWLD 66
PA+ ++ WG GQ G G E ++P + P PA +
Sbjct: 32 PAELEVWAWGRGTHGQVGH-GSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGNVG 90
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ CG H+ A +F WG + G+LG TE + P +++ V+ S G
Sbjct: 91 VTCGLFHSVLFAEQ-DVFVWGKGDGGRLGIDTEFNQYKPYVNPRIKR--VQMASAGGLHN 147
Query: 127 AAIAEPRENDGTISTSRLWVWGQN------QGSN----FPRLFWGAFTPNTIICQVSCGS 176
A+ E ++ WG GS PRL G + I VS G
Sbjct: 148 IALTE---------VGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDR--IVHVSAGG 196
Query: 177 VHVVALSECGLLQAWGYNE-YGQLGRG---ITCEG-LQGPRVIKGYAKFLDEAPELEKIT 231
H A++E G L WG +E G+LG G I EG L P ++ + P I
Sbjct: 197 SHSAAVTESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQAL-----DVP----IA 247
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
V CG + + A++++G++++WG + +LGH + + K P+ V AL+ + + VACG
Sbjct: 248 SVYCGGFFTMALTKSGQLWSWGGNANHELGHGTRANNWK---PKVVAALEDVTLVQVACG 304
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGL-----GPQTRSFSLIPNESDTYFRNIPILVVPNG 346
G H+ ALT G + WG GQLG G + + +++ TY
Sbjct: 305 GFHAAALTQDGKVITWGYGGNGQLGHGTLENGKEPAIVEAMADKTCTY------------ 352
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYN 372
+ACG + T +G ++ WG N
Sbjct: 353 ---IACGPAWTAAITENGDLYTWGKN 375
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 115/244 (47%), Gaps = 27/244 (11%)
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
V+CG H V +E + WG + G+LG I E Q Y +++ P ++++
Sbjct: 91 VTCGLFHSVLFAEQDVF-VWGKGDGGRLG--IDTEFNQ-------YKPYVN--PRIKRVQ 138
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
S G H+ A++E G VYTWG G+ G LGH S + +ELLPR + I V+ G
Sbjct: 139 MASAGGLHNIALTEVGNVYTWGYGAFGALGHGSYE---RELLPRLLEGPWKDRIVHVSAG 195
Query: 292 GVHSCALTSKGALYAWGGSQA-GQLGLG-PQTRSFSLIPNESDTYFRNIPILVVPNGVQL 349
G HS A+T G LY WG + G+LG G P + + ++PI V
Sbjct: 196 GSHSAAVTESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDVPIASV------ 249
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVR--KLAAGGGH 407
CG T+ + G++ WG N+ + + W P V + +V ++A GG H
Sbjct: 250 -YCGGFFTMALTKSGQLWSWGGNANHELGHGTRANNWKPKVVA-ALEDVTLVQVACGGFH 307
Query: 408 SAVL 411
+A L
Sbjct: 308 AAAL 311
>gi|4557445|ref|NP_001259.1| RCC1 and BTB domain-containing protein 2 [Homo sapiens]
gi|197099869|ref|NP_001125174.1| RCC1 and BTB domain-containing protein 2 isoform 1 [Pongo abelii]
gi|332241903|ref|XP_003270124.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Nomascus leucogenys]
gi|397480404|ref|XP_003811474.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Pan
paniscus]
gi|426375447|ref|XP_004054550.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 1
[Gorilla gorilla gorilla]
gi|74739686|sp|O95199.1|RCBT2_HUMAN RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; Short=CHC1-L;
AltName: Full=RCC1-like G exchanging factor; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|75042250|sp|Q5RCZ7.1|RCBT2_PONAB RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|3789799|gb|AAC79987.1| RCC1-like G exchanging factor RLG [Homo sapiens]
gi|20810515|gb|AAH29052.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Homo sapiens]
gi|32891797|gb|AAP88928.1| chromosome condensation 1-like [Homo sapiens]
gi|55727208|emb|CAH90360.1| hypothetical protein [Pongo abelii]
gi|119629204|gb|EAX08799.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_a [Homo sapiens]
gi|123979830|gb|ABM81744.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [synthetic construct]
gi|124000595|gb|ABM87806.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [synthetic construct]
gi|189055081|dbj|BAG38065.1| unnamed protein product [Homo sapiens]
Length = 551
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 112/227 (49%), Gaps = 22/227 (9%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H+V + G + WG+N Y QLG G T GL + + +++ +V+CG
Sbjct: 110 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN--------KQVIEVACGS 161
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHSC 296
YHS ++ +GEV+ WG + GQ+G S + + +PRRV L + +ACG +
Sbjct: 162 YHSLVLTSDGEVFAWGYNNSGQVGSGSTVN---QPIPRRVTGCLQNKVVVTIACGQMCCM 218
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G +Y WG + GQLGLG + + R VQ VACG++H
Sbjct: 219 AVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR----------VQRVACGYAH 268
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 403
TLV +G+++ WG NSYGQ + YP+PV + ++AA
Sbjct: 269 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA 315
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 131/300 (43%), Gaps = 43/300 (14%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTAAIAEPRENDGTIS 140
+F G N G LG G + P ++ L + + +S G+ H A E
Sbjct: 67 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTE--------- 117
Query: 141 TSRLWVWGQNQGSNFPR---------LFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
++ WG N S N + +V+CGS H + L+ G + AW
Sbjct: 118 -GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAW 176
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
GYN GQ+G G T PR + G + + + ++CG+ AV + GEVY
Sbjct: 177 GYNNSGQVGSGSTVNQ-PIPRRVTG-------CLQNKVVVTIACGQMCCMAVVDTGEVYV 228
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG GQLG L + + P RV AL GI ++ VACG H+ LT +G +YAWG +
Sbjct: 229 WGYNGNGQLG---LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 285
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRIHGWG 370
GQLG G N+S+ + + +++ AC +HT + G ++ WG
Sbjct: 286 YGQLGTG----------NKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 113/243 (46%), Gaps = 39/243 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G +P + L +N + +++ACG H+ + SDG
Sbjct: 120 VFTWGHNAYSQLG-NGTTNHGLVPCHISTNL------SNKQVIEVACGSYHSLVLTSDGE 172
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P +V LQ++ V +I+CG C A+ + T
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAV---------VDT 223
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N N P A + +V+CG H + L++ G + AWG
Sbjct: 224 GEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 283
Query: 194 NEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G + + P + E ++I ++ +C H SAA ++ G VY
Sbjct: 284 NSYGQLGTGNKSNQSYPTPVTV-----------EKDRIIEIAACHSTHTSAAKTQGGHVY 332
Query: 251 TWG 253
WG
Sbjct: 333 MWG 335
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 72/154 (46%), Gaps = 19/154 (12%)
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHSCALTSK 301
N E++ G G LG +QS + PRR+ +L+G K +AC G H T++
Sbjct: 64 NDEIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLNG---KKIACLSYGSGPHIVLATTE 117
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
G ++ WG + QLG G T + L+P T N ++ V ACG H+LV
Sbjct: 118 GEVFTWGHNAYSQLGNG--TTNHGLVPCHISTNLSNKQVIEV-------ACGSYHSLVLT 168
Query: 362 RDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 395
DG + WGYN+ GQ + + P V C+
Sbjct: 169 SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCL 202
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 18/150 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G Q P A R +ACG+ HT + +G
Sbjct: 226 VYVWGYNGNGQLGLGNSGNQ--------PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 277
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WGAN +GQLG G + + +P V + ++ +C + T+A
Sbjct: 278 VYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSA--------AKTQGG 329
Query: 143 RLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 330 HVYMWGQCRGQSVILPHLTHFSCTDDVFAC 359
>gi|392347372|ref|XP_342701.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
norvegicus]
Length = 1185
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 146/355 (41%), Gaps = 78/355 (21%)
Query: 58 AGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVK 117
AG + L A G H+ + S+ +++ G N GQLG + + K P
Sbjct: 175 AGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRP------------ 222
Query: 118 SISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSV 177
EP + T+ I VSCG
Sbjct: 223 -------------EPIQALSTVH----------------------------IDLVSCGKE 241
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H VA+ G + WG GQLG G + E P I A KI QVSCG
Sbjct: 242 HSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGI--------KIIQVSCGH 293
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGH----CSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
YHS A+SE+G+V++WG GQLG CS S P++V +L+GI + VA GG
Sbjct: 294 YHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQAS------PQKVKSLEGIPLAQVAAGGT 347
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG 353
HS AL+ G + WG +++GQL L + + S + + V ++CG
Sbjct: 348 HSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTL-------NVVYISCG 400
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
+ HT V DG++ +G +S Q + + P ++ G V ++ G H+
Sbjct: 401 YEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYHT 455
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 96/189 (50%), Gaps = 20/189 (10%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
K+ + + GE HS + N VY+ G S GQLG S QS + P + AL + I V
Sbjct: 180 KLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKR---PEPIQALSTVHIDLV 236
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
+CG HS A+ +G ++ WG GQLG+G +++ S +P + ++ G++
Sbjct: 237 SCGKEHSVAVCHQGRVFTWGAGSEGQLGIG-ESKEISFMPTKINSL----------AGIK 285
Query: 349 L--VACGHSHTLVYMRDGRIHGWGYNSYGQ--AANEKSTYAWYPSPVDWCVG-EVRKLAA 403
+ V+CGH H+L DG++ WG N GQ N + A P V G + ++AA
Sbjct: 286 IIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQA-SPQKVKSLEGIPLAQVAA 344
Query: 404 GGGHSAVLA 412
GG HS L+
Sbjct: 345 GGTHSFALS 353
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 78/191 (40%), Gaps = 29/191 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G P+++ L G P +A G H+ A++ GT
Sbjct: 305 VFSWGSNRQGQLGLGNNLCSQASPQKV-KSLEGIPLA------QVAAGGTHSFALSLMGT 357
Query: 83 LFTWGANEFGQL---GDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
F WG N GQL G+ +E P + L++ V ISCG T+ + E DG +
Sbjct: 358 SFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTE----DGQV 413
Query: 140 -----STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
S+S G P+L G + Q+ CGS H +A +
Sbjct: 414 FTFGGSSSEQLQHSPRSGRGGPQLIEGI---GGHVSQIECGSYHTIAY-------VYTTG 463
Query: 195 EYGQLGRGITC 205
+ LGRG +C
Sbjct: 464 QVVSLGRGPSC 474
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 66/144 (45%), Gaps = 16/144 (11%)
Query: 274 PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL-GPQTRSFSLIPNESD 332
PRR+ A G+ + A G HS L S +Y+ G + GQLG PQ+
Sbjct: 170 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTK--------- 220
Query: 333 TYFRNIPILVVPN-GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ-AANEKSTYAWYPSP 390
R PI + + LV+CG H++ GR+ WG S GQ E ++ P+
Sbjct: 221 ---RPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTK 277
Query: 391 VDWCVG-EVRKLAAGGGHSAVLAD 413
++ G ++ +++ G HS L++
Sbjct: 278 INSLAGIKIIQVSCGHYHSLALSE 301
>gi|355778100|gb|EHH63136.1| hypothetical protein EGM_16043 [Macaca fascicularis]
Length = 4862
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 173/382 (45%), Gaps = 79/382 (20%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI--- 139
++ WGA GQL E GR + + CG +CT I + +GT+
Sbjct: 3999 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVI----QANGTVLAC 4051
Query: 140 ---STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQV--SCGSV-HVVALSECGLLQAWGY 193
S RL GQ + L + ++ Q+ SCGS H +AL+E G + +WG
Sbjct: 4052 GEGSYGRL---GQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
+YG+LG G + + PR I EA + E++ Q+SCG HSA V+ +G+++T+G
Sbjct: 4109 GDYGKLGHG-NSDRQRRPRQI--------EALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4159
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL-YAWGGSQA 312
G G+LG L + + LP RV AL+G I VACG H+ A+++ G++ +A+G
Sbjct: 4160 NGDYGRLG---LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4216
Query: 313 GQLGLGPQTRSFSLIPNESDTY--------------------------FRNIPILVVPNG 346
G+LGLG T S P + D F ++ +P G
Sbjct: 4217 GKLGLGNSTAKSS--PQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4274
Query: 347 ------------------VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYP 388
++ VA G HTL +G ++ WG NS GQ + + P
Sbjct: 4275 RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP 4334
Query: 389 SPVDWCVGE-VRKLAAGGGHSA 409
+ V G+ +R+++AG HSA
Sbjct: 4335 TLVTGLQGKNIRQISAGRCHSA 4356
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 186/405 (45%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ P+L P+ ++++ I G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQ------PKL--APSFSDAQ--TIEAGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG----T 138
+ G +G+LG G + +K+L E +SI ++ + +DG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQS---TLKKLTFEPHRSIK-------KVSSSKGSDGHTLAF 473
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ ++ WG + +P+L G ++C VS G H A++E G L
Sbjct: 474 TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGEL 532
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G + P ++K ++ + +VSCG H+ A+S++G
Sbjct: 533 YTWGEGDFGRLGHGDS-NSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 581
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ + AL G+FI+ V G S ALTS G +Y
Sbjct: 582 TVWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVY 636
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V V+ G SH L D
Sbjct: 637 AWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-VSIGDSHCLALSHDNE 685
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 166/377 (44%), Gaps = 85/377 (22%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPP-------- 51
MD + T+RP D ++ K +Y+WG GQ GR + +P P
Sbjct: 3976 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMVPAAAPSFSQAQQVI 4033
Query: 52 -------------ELFGCPAGANSRW------------------------LDIACGHE-H 73
+ C G+ R L +CG + H
Sbjct: 4034 CGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGH 4093
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
+ A+ G +F+WG ++G+LG G + ++ P +++ LQ E V +SCG +A +
Sbjct: 4094 SMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT--- 4150
Query: 134 ENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-----------ICQVSCGSVHVVAL 182
+DG +L+ +G ++ RL G + + I QV+CG H +A+
Sbjct: 4151 -SDG-----KLFTFGNG---DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV 4201
Query: 183 SECG-LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
S G ++ A+G +YG+LG G P+ I I +V+CG S
Sbjct: 4202 SADGSMVWAFGDGDYGKLGLG-NSTAKSSPQKIDVLCGI--------GIKKVACGTQFSV 4252
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A++++G VYT+G + L ++ ++ P+++ L G+ I+DVA G H+ AL S
Sbjct: 4253 ALTKDGHVYTFGQDRLIGLPEGRARNHNR---PQQIPVLAGMIIEDVAVGAEHTLALASN 4309
Query: 302 GALYAWGGSQAGQLGLG 318
G +YAWG + GQLGLG
Sbjct: 4310 GDVYAWGSNSEGQLGLG 4326
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 143/307 (46%), Gaps = 43/307 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V SDG
Sbjct: 4103 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTSDGK 4154
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG++
Sbjct: 4155 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA----DGSM--- 4207
Query: 143 RLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T P I I +V+CG+ VAL++ G + +
Sbjct: 4208 -VWAFGDG---DYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4263
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ I A + I V+ G H+ A++ NG+VY
Sbjct: 4264 GQDRLIGLPEG-RARNHNRPQQIPVLAGMI--------IEDVAVGAEHTLALASNGDVYA 4314
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWGGS 310
WG S GQLG L + P V L G I+ ++ G HS A T+ A G S
Sbjct: 4315 WGSNSEGQLG---LGHTNHVREPTLVTGLQGKNIRQISAGRCHSAAWTAPPVPPRAPGVS 4371
Query: 311 QAGQLGL 317
QLGL
Sbjct: 4372 VPLQLGL 4378
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P I I +V GS +AL+ G + AW
Sbjct: 583 -VWSFG---GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I VS G+ H A+S + EVY
Sbjct: 639 GCG--ACLGCGSSEATALRPKLIEELAA--------TRIVDVSIGDSHCLALSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDGI I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 30/228 (13%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +GQL G V+ A AP + QV CG+ + + NG V
Sbjct: 4002 WGAGRHGQLAEA-------GRNVMVPAA-----APSFSQAQQVICGQNCTFVIQANGTVL 4049
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGALYAW 307
G GS G+LG + S D +L + AL G + + +CG HS ALT G +++W
Sbjct: 4050 ACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSW 4106
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G R R I L VQ+ +CG H+ V DG++
Sbjct: 4107 GDGDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLF 4156
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
+G YG+ ++ P V G ++ ++A G H+ AV AD
Sbjct: 4157 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 4204
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VSE EVY WG S QL G +E + + +A + + G + +++ G
Sbjct: 368 VSETCEVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ A G G+LGLG +L + + R+I + G HTL +
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RSIKKVSSSKG------SDGHTLAFTT 475
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+G + WG YG+ + S+ YP + + G+V ++AG HSA + +
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
>gi|55725019|emb|CAH89377.1| hypothetical protein [Pongo abelii]
Length = 451
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 112/227 (49%), Gaps = 22/227 (9%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H+V + G + WG+N Y QLG G T GL + + +++ +V+CG
Sbjct: 115 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN--------KQVIEVACGS 166
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHSC 296
YHS ++ +GEV+ WG + GQ+G S + + +PRRV L + +ACG +
Sbjct: 167 YHSLVLTSDGEVFAWGYNNSGQVGSGSTVN---QPIPRRVTGCLQNKVVVTIACGQMCCM 223
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G +Y WG + GQLGLG + + R VQ VACG++H
Sbjct: 224 AVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR----------VQRVACGYAH 273
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 403
TLV +G+++ WG NSYGQ + YP+PV + ++AA
Sbjct: 274 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA 320
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 139/319 (43%), Gaps = 44/319 (13%)
Query: 64 WLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA 123
W+ + G+E +D +F G N G LG G + P ++ L + + +S G+
Sbjct: 54 WVFGSAGNEVLYTTVND-EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGS 112
Query: 124 --HCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPR---------LFWGAFTPNTIICQV 172
H A E ++ WG N S N + +V
Sbjct: 113 GPHIVLATTE----------GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV 162
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
+CGS H + L+ G + AWGYN GQ+G G T PR + G + + +
Sbjct: 163 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRVTG-------CLQNKVVVT 214
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
++CG+ AV + GEVY WG GQLG L + + P RV AL GI ++ VACG
Sbjct: 215 IACGQMCCMAVVDTGEVYVWGYNGNGQLG---LGNSGNQPTPCRVAALQGIRVQRVACGY 271
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVAC 352
H+ LT +G +YAWG + GQLG G N+S+ + + +++ AC
Sbjct: 272 AHTLVLTDEGQVYAWGANSYGQLGTG----------NKSNQSYPTPVTVEKDRIIEIAAC 321
Query: 353 GHSHT-LVYMRDGRIHGWG 370
+HT + G ++ WG
Sbjct: 322 HSTHTSAAKTQGGHVYMWG 340
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 113/243 (46%), Gaps = 39/243 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G +P + L +N + +++ACG H+ + SDG
Sbjct: 125 VFTWGHNAYSQLG-NGTTNHGLVPCHISTNL------SNKQVIEVACGSYHSLVLTSDGE 177
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P +V LQ++ V +I+CG C A+ + T
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAV---------VDT 228
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N N P A + +V+CG H + L++ G + AWG
Sbjct: 229 GEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 288
Query: 194 NEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G + + P + E ++I ++ +C H SAA ++ G VY
Sbjct: 289 NSYGQLGTGNKSNQSYPTPVTV-----------EKDRIIEIAACHSTHTSAAKTQGGHVY 337
Query: 251 TWG 253
WG
Sbjct: 338 MWG 340
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 72/154 (46%), Gaps = 19/154 (12%)
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHSCALTSK 301
N E++ G G LG +QS + PRR+ +L+G K +AC G H T++
Sbjct: 69 NDEIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLNG---KKIACLSYGSGPHIVLATTE 122
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
G ++ WG + QLG G T + L+P T N ++ V ACG H+LV
Sbjct: 123 GEVFTWGHNAYSQLGNG--TTNHGLVPCHISTNLSNKQVIEV-------ACGSYHSLVLT 173
Query: 362 RDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 395
DG + WGYN+ GQ + + P V C+
Sbjct: 174 SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCL 207
>gi|413942403|gb|AFW75052.1| putative regulator of chromosome condensation (RCC1) family
protein, partial [Zea mays]
Length = 688
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 120/420 (28%), Positives = 175/420 (41%), Gaps = 67/420 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQL----RIPKQLPPELFGCPAGANSRWLDI---ACGHEHTA 75
+YVWG + R G + + RI LP L ++ LD+ CG +H A
Sbjct: 37 VYVWGEVVCDTSVRTGSDTVISSTGRIDILLPKPL------ESNLVLDVYHVDCGVKHAA 90
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE- 134
V +G +FTWG + G+LG GT E P V+ L V ++CG T A+ E
Sbjct: 91 LVMKNGEVFTWGEDSGGRLGHGTREDCVRPRLVESLTVSNVDFVACGEFHTCAVTTTGEL 150
Query: 135 ---NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
DGT + L G + G P+ GA + VSCG+ H ++ G L +
Sbjct: 151 YTWGDGTYNVGLLG-HGNDVGHWIPKRISGALE-GLQVAYVSCGTWHTALITSMGQLFTF 208
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE------ 245
G +G LG G + + PR ++ + K V+CG +H+AA+ E
Sbjct: 209 GDGSFGVLGHG-DLKSVSYPREVESLSGL--------KTIAVACGVWHTAAIVEVIVTRS 259
Query: 246 -------NGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHSC 296
G+++TWG G +LGH GDKE L P V L VACG +
Sbjct: 260 SSSVKLSAGKLFTWGDGDKHRLGH-----GDKETRLKPTCVATLIDHDFYRVACGHSLTV 314
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV----VPNGVQLVAC 352
ALT+ G + + G + GQLG P + IP LV V V +AC
Sbjct: 315 ALTTSGQVLSMGNAVYGQLG-NPHSDG-------------RIPCLVEDKIVGEQVLQIAC 360
Query: 353 GHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVL 411
G H V + WG + G+ + + P+ V+ VR +A G +A +
Sbjct: 361 GSYHVAVLTNRSEVFTWGKGANGRLGHGDTEDRKVPTLVEALKDRAVRYIACGANFTAAI 420
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 135/302 (44%), Gaps = 43/302 (14%)
Query: 23 IYVWG---YNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+Y WG YN G G G + IPK++ L G ++CG HTA + S
Sbjct: 150 LYTWGDGTYN-VGLLGH-GNDVGHWIPKRISGALEGLQVAY------VSCGTWHTALITS 201
Query: 80 DGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE---PREND 136
G LFT+G FG LG G + +P +V+ L +++CG TAAI E R +
Sbjct: 202 MGQLFTFGDGSFGVLGHGDLKSVSYPREVESLSGLKTIAVACGVWHTAAIVEVIVTRSSS 261
Query: 137 GT-ISTSRLWVWGQ------NQGSNFPRL--FWGAFTPNTIICQVSCGSVHVVALSECGL 187
+S +L+ WG G RL A + +V+CG VAL+ G
Sbjct: 262 SVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLIDHDFYRVACGHSLTVALTTSGQ 321
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ + G YGQLG P +++ E++ Q++CG YH A ++
Sbjct: 322 VLSMGNAVYGQLG---------NPHSDGRIPCLVEDKIVGEQVLQIACGSYHVAVLTNRS 372
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
EV+TWG G+ G+LGH GD E +P V AL ++ +ACG + A+ Y
Sbjct: 373 EVFTWGKGANGRLGH-----GDTEDRKVPTLVEALKDRAVRYIACGANFTAAICQ----Y 423
Query: 306 AW 307
W
Sbjct: 424 KW 425
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 67/137 (48%), Gaps = 22/137 (16%)
Query: 44 RIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRK 103
RIP + ++ G + L IACG H A + + +FTWG G+LG G E RK
Sbjct: 341 RIPCLVEDKIVG------EQVLQIACGSYHVAVLTNRSEVFTWGKGANGRLGHGDTEDRK 394
Query: 104 HPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWG--QNQGSNFPRLFWG 161
P V+ L+ V+ I+CGA+ TAAI + + WV G Q+Q S+ + F
Sbjct: 395 VPTLVEALKDRAVRYIACGANFTAAICQYK-----------WVSGADQSQCSSCRQPF-- 441
Query: 162 AFTPNTIICQVSCGSVH 178
FT C +CG VH
Sbjct: 442 GFTRKRRNC-YNCGLVH 457
>gi|344292741|ref|XP_003418084.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Loxodonta africana]
Length = 1100
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/317 (31%), Positives = 153/317 (48%), Gaps = 37/317 (11%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++CG EHTA + + L+ +G+N +GQLG G++ P VK L+SE VK +CG + T
Sbjct: 36 LSCGDEHTALITGNNKLYMFGSNNWGQLGLGSKSAVYRPICVKALKSEKVKLAACGRNHT 95
Query: 127 AAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
E G + +L + + ++F + + FT I Q+S G+ AL+E
Sbjct: 96 LVSTEGGNVYATGGNNEGQLGLGDTEERNSFHLISF--FTSRHKIKQLSAGANISAALTE 153
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G L WG N GQ+G +V G + I+ +SCG YHSA V+
Sbjct: 154 DGELFMWGDNSEGQIGLNSISNVYVPRQVTVG-----------KPISWISCGYYHSAFVT 202
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK--DVACGGVHSCALTSKG 302
G++YT+G G+LG S Q + R+ + GI K VACGG H+ LT K
Sbjct: 203 MEGKLYTFGEPECGKLGLPSEQL----INHRKPQLVSGISEKVIQVACGGGHTVVLTEK- 257
Query: 303 ALYAWGGSQAGQLGLGP---QTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
A+Y +G + GQLGLG Q +++ + D R+I +CG +HT +
Sbjct: 258 AVYTFGQGRFGQLGLGSFIFQAPEPAILEHVKDQKIRHI------------SCGENHTAL 305
Query: 360 YMRDGRIHGWGYNSYGQ 376
G ++ +G +G+
Sbjct: 306 ITDVGHMYTFGDGRHGK 322
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 156/355 (43%), Gaps = 51/355 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIA-CGHEHTA 75
I + +Y++G N+ GQ G + R C S + +A CG HT
Sbjct: 46 ITGNNKLYMFGSNNWGQLGLGSKSAVYRPI---------CVKALKSEKVKLAACGRNHTL 96
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF-VKSISCGAHCTAAIAEPRE 134
G ++ G N GQLG G E R + S +K +S GA+ +AA+ E
Sbjct: 97 VSTEGGNVYATGGNNEGQLGLGDTEERNSFHLISFFTSRHKIKQLSAGANISAALTE--- 153
Query: 135 NDGTISTSRLWVWGQN-QGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECGLL 188
DG L++WG N +G + P + I +SCG H ++ G L
Sbjct: 154 -DG-----ELFMWGDNSEGQIGLNSISNVYVPRQVTVGKPISWISCGYYHSAFVTMEGKL 207
Query: 189 QAWGYNEYGQLGRGITCEGL---QGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
+G E G+LG + E L + P+++ G + EK+ QV+CG H+ ++E
Sbjct: 208 YTFGEPECGKLG--LPSEQLINHRKPQLVSGIS---------EKVIQVACGGGHTVVLTE 256
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
VYT+G G GQLG S E P + + I+ ++CG H+ +T G +Y
Sbjct: 257 KA-VYTFGQGRFGQLGLGSFIFQAPE--PAILEHVKDQKIRHISCGENHTALITDVGHMY 313
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+G + G+LGLG + + +P + + I + LVACG H L++
Sbjct: 314 TFGDGRHGKLGLGLENFTNQFVPTLCSHFSKFI--------IHLVACGGCHMLIF 360
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 123/280 (43%), Gaps = 39/280 (13%)
Query: 144 LWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
++ +G+ + N P FW N + +SCG H ++ L +G N +GQLG G
Sbjct: 10 VFTFGKTRLAENIPSKFW---FKNDVPIYLSCGDEHTALITGNNKLYMFGSNNWGQLGLG 66
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
+ + P +K A + EK+ +CG H+ +E G VY G + GQLG
Sbjct: 67 -SKSAVYRPICVK--------ALKSEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLG- 116
Query: 263 CSLQSGDKELLPRRVVALDGIF-----IKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GD E R L F IK ++ G S ALT G L+ WG + GQ+GL
Sbjct: 117 ----LGDTE--ERNSFHLISFFTSRHKIKQLSAGANISAALTEDGELFMWGDNSEGQIGL 170
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+ + +P + + V + ++CG+ H+ +G+++ +G G+
Sbjct: 171 NSISNVY--VPRQ----------VTVGKPISWISCGYYHSAFVTMEGKLYTFGEPECGKL 218
Query: 378 A--NEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADAC 415
+E+ P V +V ++A GGGH+ VL +
Sbjct: 219 GLPSEQLINHRKPQLVSGISEKVIQVACGGGHTVVLTEKA 258
>gi|194206384|ref|XP_001917973.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase HERC2
[Equus caballus]
Length = 4840
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 134/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3072 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 3123
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 3124 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 3176
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 3177 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3233
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV++ G+VY
Sbjct: 3234 GKGDYFRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDAGQVYA 3284
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3285 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3330
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 3011 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQV-----TALSSYVVKKVAVHSGGRHATA 3065
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+
Sbjct: 3066 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------ 3119
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 3120 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3173
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 3174 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 3224
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH S K P+ V L G I VA G +H A+T G
Sbjct: 3225 TKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDAGQ 3281
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 3282 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3328
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 160/366 (43%), Gaps = 59/366 (16%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC-- 121
+ +A G + AV +G ++ G G+LG G G P +V L S VK ++
Sbjct: 2999 VQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQVTALSSYVVKKVAVHS 3058
Query: 122 -GAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIIC 170
G H TA DG +++ WG+ PRL T I
Sbjct: 3059 GGRHATALTV-----DG-----KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IR 3106
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP--RVIKGYAKFLDEAPELE 228
++CGS H AL+ G L WG EYG+LG G L+ +V+ G+
Sbjct: 3107 DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH----------- 3155
Query: 229 KITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
++ QV+CG + + A+++ G V++WG G G+LG + + +P+ + L+G +
Sbjct: 3156 RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVC 3212
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
+ CG S ALT G ++ WG +LG G SD + R ++ G
Sbjct: 3213 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRG 3260
Query: 347 VQLV--ACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAA 403
++V A G H L G+++ WG N +GQ N +T P+ V G+ + ++A
Sbjct: 3261 KKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVAC 3320
Query: 404 GGGHSA 409
G HS
Sbjct: 3321 GSSHSV 3326
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 144/327 (44%), Gaps = 50/327 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +D+A G H+A V + G
Sbjct: 4066 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRGIE--LVDVAAGGAHSACVTAAGD 4117
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG E + P+ V+ LQ V ++CG+ + +D T+
Sbjct: 4118 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLC--LTDDDTV--- 4172
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 4173 --WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4230
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 4231 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4281
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G + VACG H+ AW S+
Sbjct: 4282 NDEGQLGDGTTNAIQR---PRLVPALQGKKVNRVACGSAHT---------LAWSTSKPAS 4329
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPIL 341
G P + +P E + + + IPI+
Sbjct: 4330 AGKLP-----TQVPMEYN-HLQEIPII 4350
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 174/411 (42%), Gaps = 76/411 (18%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P C A A R + + G + AV +DG
Sbjct: 3960 IYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALATLRPVQLIGGEQTLFAVTADG 4010
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 4011 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE------- 4063
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG+ + PR+ + V+ G H ++ G L
Sbjct: 4064 ---GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIELVDVAAGGAHSACVTAAGDL 4118
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSEN 246
WG YG+LG + + L+ P+++ EA + ++ V+C G+ + ++++
Sbjct: 4119 YTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVVDVACGSGDAQTLCLTDD 4169
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4170 DTVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 4226
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTL 358
WG +LG G SD + R P VQ +A G H +
Sbjct: 4227 WGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCV 4268
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
DG ++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4269 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVPALQGKKVNRVACGSAHT 4319
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 129/276 (46%), Gaps = 25/276 (9%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N + P+L G + N + H +AL+ G + +WG + G+LG G
Sbjct: 472 RVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG 531
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P+VI ++ + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 532 DTVP-LEEPKVISAFSG----KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 586
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + E +P V L G+ + DVACG + A+T G +++WG G+LG G
Sbjct: 587 ---GSSEDEAVPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 643
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D V V CG ++ +DG+++ WG +
Sbjct: 644 DGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 691
Query: 379 NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ + YP ++ G +V +AAG H L +
Sbjct: 692 HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 135/307 (43%), Gaps = 47/307 (15%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHC 125
+ G +H A++S+G +++WG E G+LG G P ++ L+ E V + GAH
Sbjct: 4050 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIELVDVAAGGAHS 4109
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCG 175
A L+ WG+ + P+L A + ++ V+CG
Sbjct: 4110 ACVTA----------AGDLYTWGKGRYGRLGHSDSEDQLKPKLV-EALQGHRVV-DVACG 4157
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + L++ + +WG +YG+LGRG +G + P I + +V
Sbjct: 4158 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVKV 4208
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G VYTWG G +LGH S D PR+V L G + +A G +
Sbjct: 4209 ECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSL 4265
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG 353
H T G +Y WG + GQLG G + R +P L V VACG
Sbjct: 4266 HCVCCTEDGEVYTWGDNDEGQLGDG---------TTNAIQRPRLVPAL-QGKKVNRVACG 4315
Query: 354 HSHTLVY 360
+HTL +
Sbjct: 4316 SAHTLAW 4322
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 106/210 (50%), Gaps = 21/210 (10%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ QV+ GS + A++ G + A G G+LG GI+ + PR + + ++
Sbjct: 2998 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQVTALSSYV------V 3051
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
K V G H+ A++ +G+V++WG G G+LGH S + DK PR + AL I+D+
Sbjct: 3052 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDI 3108
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
ACG HS ALTS G LY WG + G+LG G T + + +L+ +Q
Sbjct: 3109 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKP---------KMVKVLLGHRVIQ 3159
Query: 349 LVACG--HSHTLVYMRDGRIHGWGYNSYGQ 376
VACG + TL +G + WG +G+
Sbjct: 3160 -VACGSRDAQTLALTDEGLVFSWGDGDFGK 3188
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 132/285 (46%), Gaps = 45/285 (15%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+L A N + H A+A+ G +++WG + G+LG G + P+ +
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVI 542
Query: 109 KQLQ----SEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT 164
+ V I+CG+ +AAI E L+ WG+ N+ RL G+
Sbjct: 543 SAFSGKQAGKHVVHIACGSTYSAAITAEGE---------LYTWGRG---NYGRLGHGSSE 590
Query: 165 PNTI-----------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
+ + V+CGS +A++E G + +WG +YG+LGRG +G + P
Sbjct: 591 DEAVPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTP 649
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
++I+ + +V CG S A++++G+VY+WG G +LGH G +E
Sbjct: 650 KLIEKLQDL--------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH-----GTEE 696
Query: 272 LL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ P+ + L G + DVA G H ALT +++WG + Q
Sbjct: 697 HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 136/293 (46%), Gaps = 33/293 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG G+ G G L PK + G AG + + IACG ++AA
Sbjct: 511 LAATGEVYSWGCGDGGRLGH-GDTVPLEEPKVIS-AFSGKQAGKHV--VHIACGSTYSAA 566
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E P V L+ V ++CG+ +A
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAVPMLVAGLKGLKVIDVACGSGDAQTLA------ 620
Query: 137 GTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
++W WG R G TP I + +V CGS +AL++ G +
Sbjct: 621 -VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQV 679
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG + +LG G T E ++ P++++G + +K+ V+ G H A++E+ E
Sbjct: 680 YSWGKGDNQRLGHG-TEEHVRYPKLLEGL--------QGKKVIDVAAGSTHCLALTEDSE 730
Query: 249 VYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
V++W GS Q H +L+ E P + LD I +ACG S A +S
Sbjct: 731 VHSW--GSNDQCQHFDTLRVTKPE--PSALPGLDTKHIVGIACGPAQSFAWSS 779
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 139/340 (40%), Gaps = 63/340 (18%)
Query: 56 CPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
C AN IAC + ++ +G ++T N P+ V+ L S
Sbjct: 446 CEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRN 495
Query: 116 VKSISCGA--HCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAF 163
+ I+ + H A+A +T ++ WG G P++ AF
Sbjct: 496 IVKIAAHSDGHHYLALA---------ATGEVYSWGCGDGGRLGHGDTVPLEEPKVI-SAF 545
Query: 164 TPNTI---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF 220
+ + ++CGS + A++ G L WG YG+LG G + E P ++ G
Sbjct: 546 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-SSEDEAVPMLVAGLKGL 604
Query: 221 LDEAPELEKITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
K+ V+CG + + AV+ENG+V++WG G G+LG D P+ +
Sbjct: 605 --------KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR---GGSDGCKTPKLIE 653
Query: 279 ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
L + + V CG S ALT G +Y+WG +LG G ++ + R
Sbjct: 654 KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG------------TEEHVRYP 701
Query: 339 PILVVPNGVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+L G ++ VA G +H L D +H WG N Q
Sbjct: 702 KLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 110/281 (39%), Gaps = 69/281 (24%)
Query: 186 GLLQAWGYNEYGQLGRGI---------TCEGLQGPRVIK--------------------G 216
G + WG+N GQLG GI CE L R ++ G
Sbjct: 3958 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4016
Query: 217 Y----------AKFLDEAPELEKITQ-------VSCGEYHSAAVSENGEVYTWGLGSVGQ 259
Y + + LE I V+ G H A+S GEVY+WG G+
Sbjct: 4017 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4076
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LGH + D+ PR + +L GI + DVA GG HS +T+ G LY WG + G+LG
Sbjct: 4077 LGHGNRSPCDR---PRVIESLRGIELVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG--- 4130
Query: 320 QTRSFSLIPNESDTYFRNIPILVVP---NGVQLVAC--GHSHTLVYMRDGRIHGWGYNSY 374
SD+ + P LV + V VAC G + TL D + WG Y
Sbjct: 4131 ----------HSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDY 4180
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADA 414
G+ S P +D G V K+ G S L +
Sbjct: 4181 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4221
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG + G G + +R P+Q+ + + IA G H DG
Sbjct: 4223 AVYTWGKGDYHRLGH-GSDDHVRRPRQVQ-------GLQGKKVIAIATGSLHCVCCTEDG 4274
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
++TWG N+ GQLGDGT + P V LQ + V ++CG+ T A
Sbjct: 4275 EVYTWGDNDEGQLGDGTTNAIQRPRLVPALQGKKVNRVACGSAHTLA 4321
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 74/186 (39%), Gaps = 22/186 (11%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+TQ++C E +S NG VYT S L P+ V L I +A
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------------DTLAPQLVQGLASRNIVKIA 500
Query: 290 C--GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
G H AL + G +Y+WG G+LG G +P E V
Sbjct: 501 AHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPLEEPKVISAFSGKQAGKHV 554
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGG 406
+ACG +++ +G ++ WG +YG+ + S P V G +V +A G G
Sbjct: 555 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAVPMLVAGLKGLKVIDVACGSG 614
Query: 407 HSAVLA 412
+ LA
Sbjct: 615 DAQTLA 620
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 83/220 (37%), Gaps = 66/220 (30%)
Query: 246 NGEVYTWGLGSVGQLG--------------------HCSLQSGDKELL------------ 273
+G +Y WG GQLG L G++ L
Sbjct: 3957 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4016
Query: 274 -----------------PRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWGGSQAGQ 314
P + ++ +FIK VA GG H AL+S+G +Y+WG ++ G+
Sbjct: 4017 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4076
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRDGRIHGWGYN 372
LG G ++ P + ++ G++L VA G +H+ G ++ WG
Sbjct: 4077 LGHGNRS------PCDRPRVIESL------RGIELVDVAAGGAHSACVTAAGDLYTWGKG 4124
Query: 373 SYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
YG+ + S P V+ G V +A G G + L
Sbjct: 4125 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTL 4164
>gi|188038845|gb|ACD47036.1| ASL1/Herc2 fusion protein [Mus musculus]
Length = 4746
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 177/410 (43%), Gaps = 65/410 (15%)
Query: 20 KSAIYVWGYNHSGQTG-RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
++ ++VWG N Q G KG + ++ P + N + +A G + AV
Sbjct: 2869 RTKVFVWGLNDKDQLGGLKGSKIKV-------PSFSETLSALNV--VQVAGGSKSLFAVT 2919
Query: 79 SDGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRE 134
+G +++ G G+LG G G P ++ L S VK ++ G H TA
Sbjct: 2920 VEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV---- 2975
Query: 135 NDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSE 184
DG +++ WG+ PRL T I ++ GS H L+
Sbjct: 2976 -DG-----KVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKR--IRDIAYGSSHSAPLTS 3027
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG--EYHSAA 242
G L WG EYG+LG G L+ P+++K ++ QV+CG + + A
Sbjct: 3028 SGELYTWGLGEYGRLGHGDNTTQLK-PKMVKVLLG--------HRVIQVACGSRDAQTLA 3078
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
+++ G V++WG G G+LG + + +P+ + L+G + + CG S ALT G
Sbjct: 3079 LTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTKSG 3135
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLVY 360
++ WG +LG G SD + R ++ G ++V A G H L
Sbjct: 3136 VVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3183
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
G+++ WG N +GQ N +T P+ V G+ + ++A G HS
Sbjct: 3184 TDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3233
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 144/327 (44%), Gaps = 50/327 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +D+A G H+A V + G
Sbjct: 3972 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRGIEV--VDVAAGGAHSACVTAAGD 4023
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG E + P+ V+ LQ V I+CG+ + +D T+
Sbjct: 4024 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLC--LTDDDTV--- 4078
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 4079 --WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4136
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 4137 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4187
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G + VACG H+ AW S+
Sbjct: 4188 NDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAWSTSKPAS 4235
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPIL 341
G P + +P E + + + IPI+
Sbjct: 4236 AGKLP-----AQVPMEYN-HLQEIPII 4256
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 133/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIA G H+A + S G
Sbjct: 2979 VFSWG---EGDDGKLGHFSRMNCDK---PRLIQ--ALKTKRIRDIAYGSSHSAPLTSSGE 3030
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 3031 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 3083
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 3084 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3140
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV+++G+VY
Sbjct: 3141 GKGDYFRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDSGQVYA 3191
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3192 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3237
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 163/357 (45%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 2918 VTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQI-----TALSSYVVKKVAVHSGGRHATA 2972
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+ G+ +A +
Sbjct: 2973 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLT------ 3026
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 3027 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3080
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 3081 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 3131
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH S K P+ V L G I VA G +H A+T G
Sbjct: 3132 TKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDSGQ 3188
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 3189 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3235
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 129/276 (46%), Gaps = 25/276 (9%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N P+L G + N + H +AL+ G + +WG + G+LG G
Sbjct: 382 RVYTQAYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG 441
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P+VI ++ + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 442 DTVP-LEEPKVISAFSG----KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 496
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + E +P V L G+ + DVACG + A+T G +++WG G+LG G
Sbjct: 497 ---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 553
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D V V CG ++ +DG+++ WG +
Sbjct: 554 DGCKTPKLIEKLQDL------------DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 601
Query: 379 NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ + YP ++ G +V +AAG H VL +
Sbjct: 602 HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTE 637
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 174/411 (42%), Gaps = 76/411 (18%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P C A A R + + G + AV +DG
Sbjct: 3866 IYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALATLRPVQLIGGEQTLFAVTADG 3916
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 3917 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE------- 3969
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG+ + PR+ + V+ G H ++ G L
Sbjct: 3970 ---GEVYSWGEAEDGKLGHGNRSPCDRPRVIES--LRGIEVVDVAAGGAHSACVTAAGDL 4024
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSEN 246
WG YG+LG + + L+ P+++ EA + ++ ++C G+ + ++++
Sbjct: 4025 YTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVIDIACGSGDAQTLCLTDD 4075
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4076 DTVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 4132
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTL 358
WG +LG G SD + R P VQ +A G H +
Sbjct: 4133 WGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCV 4174
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
DG ++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4175 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4225
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 134/310 (43%), Gaps = 53/310 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHC 125
+ G +H A++S+G +++WG E G+LG G P ++ L+ E V + GAH
Sbjct: 3956 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4015
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCG 175
A L+ WG+ + P+L A + +I ++CG
Sbjct: 4016 ACVTA----------AGDLYTWGKGRYGRLGHSDSEDQLKPKLV-EALQGHRVI-DIACG 4063
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + L++ + +WG +YG+LGRG +G + P I + +V
Sbjct: 4064 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVKV 4114
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G VYTWG G +LGH S D PR+V L G + +A G +
Sbjct: 4115 ECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSL 4171
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLV 350
H T G +Y WG + GQLG G T P LV V V
Sbjct: 4172 HCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRV 4218
Query: 351 ACGHSHTLVY 360
ACG +HTL +
Sbjct: 4219 ACGSAHTLAW 4228
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 131/285 (45%), Gaps = 45/285 (15%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+L A N + H A+A+ G +++WG + G+LG G + P+ +
Sbjct: 393 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVI 452
Query: 109 KQLQ----SEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT 164
+ V I+CG+ +AAI E L+ WG+ N+ RL G+
Sbjct: 453 SAFSGKQAGKHVVHIACGSTYSAAITAEGE---------LYTWGRG---NYGRLGHGSSE 500
Query: 165 PNTI-----------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
I + V+CGS +A++E G + +WG +YG+LGRG +G + P
Sbjct: 501 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTP 559
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
++I+ + +V CG S A++++G+VY+WG G +LGH G +E
Sbjct: 560 KLIEKLQDL--------DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH-----GTEE 606
Query: 272 LL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ P+ + L G + DVA G H LT +++WG + Q
Sbjct: 607 HVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSNDQCQ 651
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 122/253 (48%), Gaps = 30/253 (11%)
Query: 134 ENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N +GS + + QV+ GS + A++
Sbjct: 2863 ESTATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2921
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + + G G+LG G++ + PR I + ++ K V G H+ A++
Sbjct: 2922 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYV------VKKVAVHSGGRHATALTV 2975
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+A G HS LTS G LY
Sbjct: 2976 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIQALKTKRIRDIAYGSSHSAPLTSSGELY 3032
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRD 363
WG + G+LG G T L P + + +L+ +Q VACG + TL +
Sbjct: 3033 TWGLGEYGRLGHGDNTT--QLKP-------KMVKVLLGHRVIQ-VACGSRDAQTLALTDE 3082
Query: 364 GRIHGWGYNSYGQ 376
G + WG +G+
Sbjct: 3083 GLVFSWGDGDFGK 3095
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 133/294 (45%), Gaps = 35/294 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG G+ G G L PK + G AG + + IACG ++AA
Sbjct: 421 LAATGEVYSWGCGDGGRLGH-GDTVPLEEPKVIS-AFSGKQAGKHV--VHIACGSTYSAA 476
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E P V L+ V ++CG+ +A
Sbjct: 477 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA------ 530
Query: 137 GTISTSRLWVWGQ----------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
++W WG + G P+L + I +V CGS +AL++ G
Sbjct: 531 -VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVI--KVRCGSQFSIALTKDG 587
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ +WG + +LG G T E ++ P++++G + +K+ V+ G H ++E+
Sbjct: 588 QVYSWGKGDNQRLGHG-TEEHVRYPKLLEGL--------QGKKVIDVAAGSTHCLVLTED 638
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
EV++W GS Q H G + P LD I +ACG S A +S
Sbjct: 639 SEVHSW--GSNDQCQHFD-TLGVTKPEPTAFPGLDSKHIVGIACGPAQSFAWSS 689
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 98/212 (46%), Gaps = 28/212 (13%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ ++CGS + A++ G L WG YG+LG G + E P ++ G
Sbjct: 464 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-SSEDEAIPMLVAGLKGL-------- 514
Query: 229 KITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
K+ V+CG + + AV+ENG+V++WG G G+LG D P+ + L + +
Sbjct: 515 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR---GGSDGCKTPKLIEKLQDLDVI 571
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
V CG S ALT G +Y+WG +LG G ++ + R +L G
Sbjct: 572 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG------------TEEHVRYPKLLEGLQG 619
Query: 347 VQL--VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
++ VA G +H LV D +H WG N Q
Sbjct: 620 KKVIDVAAGSTHCLVLTEDSEVHSWGSNDQCQ 651
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 100/219 (45%), Gaps = 46/219 (21%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ QV+C + LS G + YN + P++++G A + +
Sbjct: 364 VMQVACAEKRFLILSRNGRVYTQAYNS-----------DMLAPQLVQGLA-----SRNIV 407
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI--- 283
KI S G +H A++ GEVY+WG G G+LGH GD L P+ + A G
Sbjct: 408 KIAAHSDG-HHYLALAATGEVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAG 461
Query: 284 -FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
+ +ACG +S A+T++G LY WG G+LG G + IP+LV
Sbjct: 462 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-------------SSEDEAIPMLV 508
Query: 343 V-PNGVQL--VAC--GHSHTLVYMRDGRIHGWGYNSYGQ 376
G+++ VAC G + TL +G++ WG YG+
Sbjct: 509 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 547
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 110/281 (39%), Gaps = 69/281 (24%)
Query: 186 GLLQAWGYNEYGQLGRGI---------TCEGLQGPRVIK--------------------G 216
G + WG+N GQLG GI CE L R ++ G
Sbjct: 3864 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3922
Query: 217 Y----------AKFLDEAPELEKITQ-------VSCGEYHSAAVSENGEVYTWGLGSVGQ 259
Y + + LE I V+ G H A+S GEVY+WG G+
Sbjct: 3923 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3982
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LGH + D+ PR + +L GI + DVA GG HS +T+ G LY WG + G+LG
Sbjct: 3983 LGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG--- 4036
Query: 320 QTRSFSLIPNESDTYFRNIPILVVP---NGVQLVAC--GHSHTLVYMRDGRIHGWGYNSY 374
SD+ + P LV + V +AC G + TL D + WG Y
Sbjct: 4037 ----------HSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDY 4086
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADA 414
G+ S P +D G V K+ G S L +
Sbjct: 4087 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4127
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG + G G + +R P+Q+ + + IA G H DG
Sbjct: 4129 AVYTWGKGDYHRLGH-GSDDHVRRPRQVQ-------GLQGKKVIAIATGSLHCVCCTEDG 4180
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
++TWG N+ GQLGDGT + P V LQ + V ++CG+ T A
Sbjct: 4181 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4227
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 83/224 (37%), Gaps = 39/224 (17%)
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G+ Y + I CEGL V+ QV+C E +S NG VYT
Sbjct: 343 GWKYYANVIGPIQCEGLASLGVM-----------------QVACAEKRFLILSRNGRVYT 385
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWGG 309
S L P+ V L I +A G H AL + G +Y+WG
Sbjct: 386 QAYNS-------------DMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGC 432
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGW 369
G+LG G +P E V +ACG +++ +G ++ W
Sbjct: 433 GDGGRLGHG------DTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTW 486
Query: 370 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLA 412
G +YG+ + S P V G +V +A G G + LA
Sbjct: 487 GRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 530
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 82/218 (37%), Gaps = 62/218 (28%)
Query: 246 NGEVYTWGLGSVGQLG--------------------HCSLQSGDKELL------------ 273
+G +Y WG GQLG L G++ L
Sbjct: 3863 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3922
Query: 274 -----------------PRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWGGSQAGQ 314
P + ++ +FIK VA GG H AL+S+G +Y+WG ++ G+
Sbjct: 3923 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3982
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LG G RS P ++ R I ++ VA G +H+ G ++ WG Y
Sbjct: 3983 LGHG--NRSPCDRPRVIES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRY 4032
Query: 375 GQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
G+ + S P V+ G V +A G G + L
Sbjct: 4033 GRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTL 4070
>gi|58533115|gb|AAW78912.1| putative chromosome condensation factor [Triticum turgidum]
Length = 882
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 173/426 (40%), Gaps = 66/426 (15%)
Query: 15 DNIPAKSAIYVWGYNHSGQTGRKGRERQLR--------IPKQLPPELFGCPAGANSRWLD 66
D+ + +YVWG + R + +R +PK L L LD
Sbjct: 29 DDCDSLGDVYVWGEVVCDNSARTSSDTVIRSTGKTDFLLPKPLESNLV----------LD 78
Query: 67 I---ACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA 123
+ CG H + V +G +FTWG + G+LG GT E HP V+ L + + ++CG
Sbjct: 79 VYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGE 138
Query: 124 HCTAAIAEPRE----NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHV 179
T A+ E DGT + L G + G PR G I VSCG+ H
Sbjct: 139 FHTCAVTTTGELYTWGDGTHNVG-LLGHGTDVGHWIPRRISGPL-EGLQIAYVSCGTWHT 196
Query: 180 VALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYH 239
++ G L +G +G LG G + + PR ++ + K V+CG +H
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHG-DLKSISCPREVESLSGL--------KTIAVACGVWH 247
Query: 240 SAAVSE-----------NGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIK 286
+AA+ E G+++TWG G +LGH GDKE L P V +L
Sbjct: 248 TAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGH-----GDKEARLKPTCVASLIDYDFY 302
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
VACG + LT+ G ++ G S GQLG L+ ++ +
Sbjct: 303 RVACGHSLTVGLTTSGKVWTMGNSVYGQLGNLNSDGRPCLVEDK-----------IASEH 351
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGG 405
V +ACG H V + WG + G+ + P+ V+ VR +A G
Sbjct: 352 VLQIACGSYHVAVLTSRSEVFTWGKGANGRLGHGDIEDRKVPTTVEALRDRAVRHIACGA 411
Query: 406 GHSAVL 411
+A +
Sbjct: 412 NFTAAI 417
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 126/300 (42%), Gaps = 64/300 (21%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++CG HTA + S G LFT+G FG LG G + P +V+ L +++CG T
Sbjct: 189 VSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGVWHT 248
Query: 127 AAIAEP--RENDGTISTSRLWVWGQN------QGSNFPRL--FWGAFTPNTIICQVSCGS 176
AAI E ++ T+S +L+ WG G RL A + +V+CG
Sbjct: 249 AAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFYRVACGH 308
Query: 177 VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG 236
V L+ G + G + YGQLG + G +++ E + Q++CG
Sbjct: 309 SLTVGLTTSGKVWTMGNSVYGQLGNLNS----------DGRPCLVEDKIASEHVLQIACG 358
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG---- 292
YH A ++ EV+TWG G+ G+LGH ++ D+++ P V AL ++ +ACG
Sbjct: 359 SYHVAVLTSRSEVFTWGKGANGRLGHGDIE--DRKV-PTTVEALRDRAVRHIACGANFTA 415
Query: 293 -------------------------------------VHSCALTSKGALYAWGGSQAGQL 315
VH A TS+ AL A G+L
Sbjct: 416 AICLHKWVSGADQSQCSSCRQPFGFTRKRHNCYNCGLVHCNACTSRKALRAALAPSPGKL 475
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 69/144 (47%), Gaps = 16/144 (11%)
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
A+ L IACG H A + S +FTWG G+LG G E RK P V+ L+ V+ I
Sbjct: 348 ASEHVLQIACGSYHVAVLTSRSEVFTWGKGANGRLGHGDIEDRKVPTTVEALRDRAVRHI 407
Query: 120 SCGAHCTAAIAEPRENDGTISTSRLWVWG--QNQGSNFPRLFWGAFTPNTIICQVSCGSV 177
+CGA+ TAAI + WV G Q+Q S+ + F FT C +CG V
Sbjct: 408 ACGANFTAAICLHK-----------WVSGADQSQCSSCRQPF--GFTRKRHNC-YNCGLV 453
Query: 178 HVVALSECGLLQAWGYNEYGQLGR 201
H A + L+A G+L R
Sbjct: 454 HCNACTSRKALRAALAPSPGKLHR 477
>gi|193785714|dbj|BAG51149.1| unnamed protein product [Homo sapiens]
Length = 551
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 112/227 (49%), Gaps = 22/227 (9%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H+V + G + WG+N Y QLG G T GL + + +++ +V+CG
Sbjct: 110 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN--------KQVIEVACGS 161
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHSC 296
YHS ++ +GEV+ WG + GQ+G S + + +PRRV L + +ACG +
Sbjct: 162 YHSLVLTSDGEVFAWGYNNSGQVGSGSTVN---QPIPRRVTGCLQNKVVVTIACGQMCCM 218
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G +Y WG + GQLGLG + + R VQ VACG++H
Sbjct: 219 AVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR----------VQRVACGYAH 268
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 403
TLV +G+++ WG NSYGQ + YP+PV + ++AA
Sbjct: 269 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA 315
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 131/300 (43%), Gaps = 43/300 (14%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTAAIAEPRENDGTIS 140
+F G N G LG G + P ++ L + + +S G+ H A E
Sbjct: 67 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTE--------- 117
Query: 141 TSRLWVWGQNQGSNFPR---------LFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
++ WG N S N + +V+CGS H + L+ G + AW
Sbjct: 118 -GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAW 176
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
GYN GQ+G G T PR + G + + + ++CG+ AV + GEVY
Sbjct: 177 GYNNSGQVGSGSTVNQ-PIPRRVTG-------CLQNKVVVTIACGQMCCMAVVDTGEVYV 228
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG GQLG L + + P RV AL GI ++ VACG H+ LT +G +YAWG +
Sbjct: 229 WGYNGNGQLG---LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 285
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRIHGWG 370
GQLG G N+S+ + + +++ AC +HT + G ++ WG
Sbjct: 286 YGQLGTG----------NKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 113/243 (46%), Gaps = 39/243 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G +P + L +N + +++ACG H+ + SDG
Sbjct: 120 VFTWGHNAYSQLG-NGTTNHGLVPCHISTNL------SNKQVIEVACGSYHSLVLTSDGE 172
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P +V LQ++ V +I+CG C A+ + T
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAV---------VDT 223
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N N P A + +V+CG H + L++ G + AWG
Sbjct: 224 GEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 283
Query: 194 NEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G + + P + E ++I ++ +C H SAA ++ G VY
Sbjct: 284 NSYGQLGTGNKSNQSYPTPVTV-----------EKDRIIEIAACHSTHTSAAKTQGGHVY 332
Query: 251 TWG 253
WG
Sbjct: 333 MWG 335
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 72/154 (46%), Gaps = 19/154 (12%)
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHSCALTSK 301
N E++ G G LG +QS + PRR+ +L+G K +AC G H T++
Sbjct: 64 NDEIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLNG---KKIACLSYGSGPHIVLATTE 117
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
G ++ WG + QLG G T + L+P T N ++ V ACG H+LV
Sbjct: 118 GEVFTWGHNAYSQLGNG--TTNHGLVPCHISTNLSNKQVIEV-------ACGSYHSLVLT 168
Query: 362 RDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 395
DG + WGYN+ GQ + + P V C+
Sbjct: 169 SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCL 202
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 18/138 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G Q P A R +ACG+ HT + +G
Sbjct: 226 VYVWGYNGNGQLGLGNSGNQ--------PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 277
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WGAN +GQLG G + + +P V + ++ +C + T+A
Sbjct: 278 VYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSA--------AKTQGG 329
Query: 143 RLWVWGQNQGSN--FPRL 158
+++WGQ +G + P L
Sbjct: 330 HVYMWGQCRGQSVILPHL 347
>gi|47219890|emb|CAF97160.1| unnamed protein product [Tetraodon nigroviridis]
Length = 4588
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 145/292 (49%), Gaps = 27/292 (9%)
Query: 35 GRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHE-HTAAVASDGTLFTWGANEFGQ 93
G+ GR Q P + G L +CG + H+ A+ G +F+WG +FG+
Sbjct: 3738 GQYGRLGQGNSDDLFVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDFGK 3797
Query: 94 LGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST------SRLWVW 147
LG G E ++ P++++ LQ E V ++CG +A + DG + T RL
Sbjct: 3798 LGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVTA----DGKLFTFGSGESGRL--- 3850
Query: 148 GQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGL-LQAWGYNEYGQLGRGITCE 206
GQ SN + A + QVSCG H + LS G+ + A+G +YG+LG G +
Sbjct: 3851 GQRSTSNKMQPERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGSS-- 3908
Query: 207 GLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQ 266
K Y + +++ + + +V CG S ++ +G VYT+G + L L+
Sbjct: 3909 ------TAKYYPQKVEQLCN-KGMKKVCCGAQFSVVLATDGHVYTFGQERLIGLPDSMLK 3961
Query: 267 SGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLG 318
+ P+ V +L+G+FI+D+A G H AL+S G +YAWG + GQLGLG
Sbjct: 3962 NRSN---PQVVPSLEGLFIEDIAVGCEHVLALSSTGDIYAWGCNSEGQLGLG 4010
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 130/266 (48%), Gaps = 42/266 (15%)
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAHCTAAIAE 131
HT A+ DG +F+WG E+G+LG G +K+P+ V+ L S+ V S S G +AA+
Sbjct: 435 HTLAITVDGEVFSWGDGEYGKLGHGNSATQKYPKIVQGPLFSKIVVSASAGYRHSAAVT- 493
Query: 132 PRENDGTISTSRLWVWGQ----------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA 181
NDG L+ WG+ +Q N P L + + QV+CGS H +A
Sbjct: 494 ---NDG-----ELYTWGEGDFGRLGHSDSQSRNTPTLVKDI----SGVGQVACGSSHTIA 541
Query: 182 LSECG-LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
+++ G + ++G + G+LG G T + P+VI+ F+ I +V G S
Sbjct: 542 VAQDGRTMWSFGGGDNGKLGHGDT-NRVYRPKVIEALHGFI--------IRKVCAGSQSS 592
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
A++ G+V+ WG GS G S L PR V L I D++CG H AL+
Sbjct: 593 LALTSAGQVFAWGCGSCLGCG----SSETTSLRPRFVEDLSITKIIDISCGDSHCLALSH 648
Query: 301 KGALYAWGGSQAGQLGLG----PQTR 322
+ +YAWG + GQ G G P TR
Sbjct: 649 ENEVYAWGNNTMGQCGQGHTSTPITR 674
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 109/407 (26%), Positives = 179/407 (43%), Gaps = 69/407 (16%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+YVWG N S Q E K L P+L + A + I G T +V++DG
Sbjct: 339 TVYVWGSNSSHQLAEGTLE------KILLPKLTQGFSDAQT----IEAGQYCTFSVSTDG 388
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKV-----KQLQSEFVKSISCGAHCTAAIAEPREND 136
++ G +G+LG G + P+K+ + ++ F S G H A D
Sbjct: 389 SVKACGKGSYGRLGLGDSNNQSMPKKLVLEPHRNIKKVFSSKGSDG-HTLAITV-----D 442
Query: 137 GTISTSRLWVWGQNQ----------GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
G + + WG + +P++ G + I+ S G H A++ G
Sbjct: 443 GEV-----FSWGDGEYGKLGHGNSATQKYPKIVQGPLF-SKIVVSASAGYRHSAAVTNDG 496
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
L WG ++G+LG + + P ++K ++ + QV+CG H+ AV+++
Sbjct: 497 ELYTWGEGDFGRLGHSDS-QSRNTPTLVK----------DISGVGQVACGSSHTIAVAQD 545
Query: 247 GE-VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGA 303
G ++++G G G+LGH GD + P+ + AL G I+ V G S ALTS G
Sbjct: 546 GRTMWSFGGGDNGKLGH-----GDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQ 600
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRD 363
++AWG LG G + + SL P + ++ I + + ++CG SH L +
Sbjct: 601 VFAWGCGSC--LGCG-SSETTSLRPR----FVEDLSITKIID----ISCGDSHCLALSHE 649
Query: 364 GRIHGWGYNSYGQAAN-EKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG N+ GQ ST P V G ++++ AG HS
Sbjct: 650 NEVYAWGNNTMGQCGQGHTSTPITRPKKVLGLEGVSIQQITAGTSHS 696
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 147/307 (47%), Gaps = 35/307 (11%)
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
QV CG + G + A G +YG+LG+G + L P +I + ++ +
Sbjct: 3715 QVVCGQNCSFLIQSNGAVMAVGEGQYGRLGQG-NSDDLFVPTIISAFQGYV--------V 3765
Query: 231 TQV--SCG-EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
TQ+ SCG + HS A++E GEV++WG G G+LGH + +++ P+++ AL G +
Sbjct: 3766 TQLVTSCGSDGHSMALTETGEVFSWGDGDFGKLGH---GNNERQRRPKQIEALQGEDVVQ 3822
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
+ACG HS +T+ G L+ +G ++G+LG ++ S + P + G
Sbjct: 3823 LACGFRHSAVVTADGKLFTFGSGESGRLG--QRSTSNKMQPER----------VAALEGY 3870
Query: 348 QL--VACGHSHTLVYMRDGR-IHGWGYNSYGQAANEKSTYAWYPSPVD-WCVGEVRKLAA 403
+ V+CG +HTLV DG + +G YG+ ST +YP V+ C ++K+
Sbjct: 3871 HVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGSSTAKYYPQKVEQLCNKGMKKVCC 3930
Query: 404 GGGHSAVLADACSLKELCEFRLA--ESVTLSNASEIEDVASRTG--SEALARLCERLREH 459
G S VLA + + RL L N S + V S G E +A CE +
Sbjct: 3931 GAQFSVVLATDGHVYTFGQERLIGLPDSMLKNRSNPQVVPSLEGLFIEDIAVGCEHVLAL 3990
Query: 460 SLHGDEF 466
S GD +
Sbjct: 3991 SSTGDIY 3997
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 156/374 (41%), Gaps = 89/374 (23%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAG 59
MD + ARP D KS +Y+WG GQ G L P L C
Sbjct: 3660 MDEQLMSWANARPEDWQEGGKSDVYLWGNGRYGQLAGTGTNLTL-------PTLAPCL-- 3710
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI 119
S+ + CG + + S+G + G ++G+LG G + P + Q V +
Sbjct: 3711 --SQTQQVVCGQNCSFLIQSNGAVMAVGEGQYGRLGQGNSDDLFVPTIISAFQGYVVTQL 3768
Query: 120 --SCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSV 177
SCG+ DG
Sbjct: 3769 VTSCGS------------DG---------------------------------------- 3776
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H +AL+E G + +WG ++G+LG G E + P+ I EA + E + Q++CG
Sbjct: 3777 HSMALTETGEVFSWGDGDFGKLGHG-NNERQRRPKQI--------EALQGEDVVQLACGF 3827
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA 297
HSA V+ +G+++T+G G G+LG +S ++ P RV AL+G + V+CG H+
Sbjct: 3828 RHSAVVTADGKLFTFGSGESGRLGQ---RSTSNKMQPERVAALEGYHVGQVSCGLNHTLV 3884
Query: 298 LTSKG-ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
L+ G A++A+G G+LG G T + Y + + L G++ V CG
Sbjct: 3885 LSLDGMAVWAFGDGDYGKLGAGSSTAKY---------YPQKVEQL-CNKGMKKVCCGAQF 3934
Query: 357 TLVYMRDGRIHGWG 370
++V DG ++ +G
Sbjct: 3935 SVVLATDGHVYTFG 3948
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 136/305 (44%), Gaps = 46/305 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I ++ WG G+ G Q + PK + LF + + + G+ H+AA
Sbjct: 439 ITVDGEVFSWGDGEYGKLGHGNSATQ-KYPKIVQGPLF------SKIVVSASAGYRHSAA 491
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V +DG L+TWG +FG+LG + R P VK + V ++CG+ T A+A+ D
Sbjct: 492 VTNDGELYTWGEGDFGRLGHSDSQSRNTPTLVKDISG--VGQVACGSSHTIAVAQ----D 545
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWG----AFTPNT-------IICQVSCGSVHVVALSEC 185
G +W +G G + +L G + P II +V GS +AL+
Sbjct: 546 GRT----MWSFG---GGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSA 598
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + AWG +C G +F+++ + KI +SCG+ H A+S
Sbjct: 599 GQVFAWGCG---------SCLGCGSSETTSLRPRFVEDL-SITKIIDISCGDSHCLALSH 648
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT---SKG 302
EVY WG ++GQ G + P++V+ L+G+ I+ + G HS A T +
Sbjct: 649 ENEVYAWGNNTMGQCGQGHTSTPITR--PKKVLGLEGVSIQQITAGTSHSLAWTAVPTDR 706
Query: 303 ALYAW 307
L AW
Sbjct: 707 QLVAW 711
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 100/320 (31%), Positives = 147/320 (45%), Gaps = 57/320 (17%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G ERQ R PKQ+ A + +ACG H+A V +DG
Sbjct: 3787 VFSWGDGDFGKLGHGNNERQRR-PKQIE-------ALQGEDVVQLACGFRHSAVVTADGK 3838
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G+ E G+LG + + PE+V L+ V +SCG + T ++ DG
Sbjct: 3839 LFTFGSGESGRLGQRSTSNKMQPERVAALEGYHVGQVSCGLNHTLVLSL----DG----- 3889
Query: 143 RLWVWGQNQGSNFPRLFWGAFT----PNTI--IC-----QVSCGSVHVVALSECGLLQAW 191
+ VW G ++ +L G+ T P + +C +V CG+ V L+ G + +
Sbjct: 3890 -MAVWAFGDG-DYGKLGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVLATDGHVYTF 3947
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK--ITQVSCGEYHSAAVSENGEV 249
G L + + P+V+ P LE I ++ G H A+S G++
Sbjct: 3948 GQERLIGLPDSM-LKNRSNPQVV----------PSLEGLFIEDIAVGCEHVLALSSTGDI 3996
Query: 250 YTWGLGSVGQ--LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCA----LTSKGA 303
Y WG S GQ LGHC+L KE P + AL G IK ++ G HS A TSK +
Sbjct: 3997 YAWGCNSEGQLGLGHCNLV---KE--PTLITALQGKNIKQISAGRCHSSAWTAPSTSKNS 4051
Query: 304 LY--AWGGSQAGQLGLGPQT 321
GG + QLGL PQ+
Sbjct: 4052 ALCPCQGGPGSVQLGL-PQS 4070
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 124/285 (43%), Gaps = 40/285 (14%)
Query: 144 LWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N P+L G TI G ++S G ++A G
Sbjct: 340 VYVWGSNSSHQLAEGTLEKILLPKLTQGFSDAQTI----EAGQYCTFSVSTDGSVKACGK 395
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
YG+LG G + +++ L+ ++K+ + H+ A++ +GEV++WG
Sbjct: 396 GSYGRLGLGDSNNQSMPKKLV------LEPHRNIKKVFSSKGSDGHTLAITVDGEVFSWG 449
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G G+LGH + + P+ V L + + G HS A+T+ G LY WG
Sbjct: 450 DGEYGKLGH---GNSATQKYPKIVQGPLFSKIVVSASAGYRHSAAVTNDGELYTWGEGDF 506
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIH-GWG 370
G+LG SD+ RN P LV +GV VACG SHT+ +DGR +G
Sbjct: 507 GRLG-------------HSDSQSRNTPTLVKDISGVGQVACGSSHTIAVAQDGRTMWSFG 553
Query: 371 YNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADA 414
G+ + + + P ++ G +RK+ AG S L A
Sbjct: 554 GGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSA 598
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 96/229 (41%), Gaps = 35/229 (15%)
Query: 191 WGYNEYGQL---GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
WG YGQL G +T L AP L + QV CG+ S + NG
Sbjct: 3686 WGNGRYGQLAGTGTNLTLPTL---------------APCLSQTQQVVCGQNCSFLIQSNG 3730
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGAL 304
V G G G+LG + D +P + A G + + +CG HS ALT G +
Sbjct: 3731 AVMAVGEGQYGRLGQ---GNSDDLFVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEV 3787
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 364
++WG G+LG G NE + I L + VQL ACG H+ V DG
Sbjct: 3788 FSWGDGDFGKLGHG---------NNERQRRPKQIEALQGEDVVQL-ACGFRHSAVVTADG 3837
Query: 365 RIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLA 412
++ +G G+ ++ P V G V +++ G H+ VL+
Sbjct: 3838 KLFTFGSGESGRLGQRSTSNKMQPERVAALEGYHVGQVSCGLNHTLVLS 3886
>gi|381206474|ref|ZP_09913545.1| regulator of chromosome condensation, RCC1, partial [SAR324 cluster
bacterium JCVI-SC AAA005]
Length = 436
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 138/327 (42%), Gaps = 47/327 (14%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
I+ G +HT A+ +G+ WG N +GQLG G + + P V L S+ V SIS G +
Sbjct: 135 ISVGDDHTCAMLDNGSAVCWGGNAYGQLGIGNTDNKSLPTLVSGLNSDNVTSISSGGKHS 194
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPN---------TIICQVSCGSV 177
A+ R + WG+N + +L T N T + ++S G
Sbjct: 195 CALLRNRT---------IKCWGENY---YGQLGDNTTTDNLSATLVVGITNVTKISTGGA 242
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H A+ + + WG N GQLG G T + P +I P L +T +S G+
Sbjct: 243 HTCAILDNQSIACWGKNSSGQLGIGNT-DNRSEPNII----------PSLNNVTNISAGK 291
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHC----------SLQSGDKELLPRRVVALDGIFIKD 287
H+ NG+ WG GQLG S SG P V L +K
Sbjct: 292 DHTCVTFGNGQAKCWGENYYGQLGSALSGNSSQNEHSYNSGTDNSTPVLVSGL--TNVKG 349
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFS---LIPNESDTYFRNIPILVVP 344
++ GG +CA G WG + GQLG+G Q + S ++ N ++ + +
Sbjct: 350 ISAGGYQTCATFDNGTAKCWGRNSEGQLGVGSQYDNSSVPVVVDNLTNIRLQPKASSLSS 409
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGY 371
+ + ++ G +H+ M +G WGY
Sbjct: 410 SIGETLSVGENHSCAAMDNGSTMCWGY 436
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 139/322 (43%), Gaps = 54/322 (16%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
I+ G ++ AV +G+ WG N G+LGD T + R P KV L + V SIS G T
Sbjct: 34 ISSGLDYNCAVLDNGSAMCWGDNNHGKLGDNTTQRRNTPTKVVGL--DNVSSISAGKSHT 91
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGS-----------NFPRLFWGAFTPNTIICQVSCG 175
A+ ++ WG+N+ S P L GA + +S G
Sbjct: 92 CAV---------LNNGSAMCWGRNEYSKLGDSTNVDNRTLPALVSGASN----VKGISVG 138
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
H A+ + G WG N YGQLG G T + P ++ G + +T +S
Sbjct: 139 DDHTCAMLDNGSAVCWGGNAYGQLGIGNT-DNKSLPTLVSGLNS--------DNVTSISS 189
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
G HS A+ N + WG GQLG + L VV + + ++ GG H+
Sbjct: 190 GGKHSCALLRNRTIKCWGENYYGQLGD---NTTTDNLSATLVVGI--TNVTKISTGGAHT 244
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIP-ILVVPNGVQLVACGH 354
CA+ ++ WG + +GQLG+G +T R+ P I+ N V ++ G
Sbjct: 245 CAILDNQSIACWGKNSSGQLGIG-------------NTDNRSEPNIIPSLNNVTNISAGK 291
Query: 355 SHTLVYMRDGRIHGWGYNSYGQ 376
HT V +G+ WG N YGQ
Sbjct: 292 DHTCVTFGNGQAKCWGENYYGQ 313
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 111/249 (44%), Gaps = 32/249 (12%)
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
+S G + A+ + G WG N +G+LG T + P + G L+ ++
Sbjct: 34 ISSGLDYNCAVLDNGSAMCWGDNNHGKLGDNTT-QRRNTPTKVVG----------LDNVS 82
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
+S G+ H+ AV NG WG +LG + + D LP V + K ++ G
Sbjct: 83 SISAGKSHTCAVLNNGSAMCWGRNEYSKLGDST--NVDNRTLPALVSGASNV--KGISVG 138
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV---PNGVQ 348
H+CA+ G+ WGG+ GQLG+G +T +++P LV + V
Sbjct: 139 DDHTCAMLDNGSAVCWGGNAYGQLGIG-------------NTDNKSLPTLVSGLNSDNVT 185
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
++ G H+ +R+ I WG N YGQ + +T + V + V K++ GG H+
Sbjct: 186 SISSGGKHSCALLRNRTIKCWGENYYGQLGDNTTTDNLSATLV-VGITNVTKISTGGAHT 244
Query: 409 AVLADACSL 417
+ D S+
Sbjct: 245 CAILDNQSI 253
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 81/242 (33%), Gaps = 58/242 (23%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I +I WG N SGQ G + R + P L + +I+ G +HT
Sbjct: 247 ILDNQSIACWGKNSSGQLGIGNTDN--RSEPNIIPSL--------NNVTNISAGKDHTCV 296
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+G WG N +GQLG E N
Sbjct: 297 TFGNGQAKCWGENYYGQLGSALSGNSSQNEH-------------------------SYNS 331
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
GT +++ + V G T + +S G A + G + WG N
Sbjct: 332 GTDNSTPVLVSGL-----------------TNVKGISAGGYQTCATFDNGTAKCWGRNSE 374
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ-----VSCGEYHSAAVSENGEVYT 251
GQLG G + P V+ + P+ ++ +S GE HS A +NG
Sbjct: 375 GQLGVGSQYDNSSVPVVVDNLTNIRLQ-PKASSLSSSIGETLSVGENHSCAAMDNGSTMC 433
Query: 252 WG 253
WG
Sbjct: 434 WG 435
>gi|55730398|emb|CAH91921.1| hypothetical protein [Pongo abelii]
Length = 527
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 111/227 (48%), Gaps = 22/227 (9%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H+V + G + WG+N Y QLG G T GL + + +++ +V+CG
Sbjct: 86 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN--------KQVIEVACGS 137
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHSC 296
YHS ++ +GEV+ WG + GQ+G S + +PRRV L + +ACG +
Sbjct: 138 YHSLVLTSDGEVFAWGYNNSGQVGS---GSTVNQPIPRRVTGCLQNKVVVTIACGQMCCM 194
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G +Y WG + GQLGLG + + R VQ VACG++H
Sbjct: 195 AVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR----------VQRVACGYAH 244
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 403
TLV +G+++ WG NSYGQ + YP+PV + ++AA
Sbjct: 245 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA 291
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 130/300 (43%), Gaps = 43/300 (14%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTAAIAEPRENDGTIS 140
+F G N G LG G P ++ L + + +S G+ H A E
Sbjct: 43 IFVLGTNCCGCLGLGDVRSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTE--------- 93
Query: 141 TSRLWVWGQNQGSNFPR---------LFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
++ WG N S N + +V+CGS H + L+ G + AW
Sbjct: 94 -GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAW 152
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
GYN GQ+G G T PR + G + + + ++CG+ AV + GEVY
Sbjct: 153 GYNNSGQVGSGSTVNQ-PIPRRVTG-------CLQNKVVVTIACGQMCCMAVVDTGEVYV 204
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG GQLG L + + P RV AL GI ++ VACG H+ LT +G +YAWG +
Sbjct: 205 WGYNGNGQLG---LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 261
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRIHGWG 370
GQLG G N+S+ + + +++ AC +HT + G ++ WG
Sbjct: 262 YGQLGTG----------NKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 113/243 (46%), Gaps = 39/243 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G +P + L +N + +++ACG H+ + SDG
Sbjct: 96 VFTWGHNAYSQLG-NGTTNHGLVPCHISTNL------SNKQVIEVACGSYHSLVLTSDGE 148
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P +V LQ++ V +I+CG C A+ + T
Sbjct: 149 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAV---------VDT 199
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N N P A + +V+CG H + L++ G + AWG
Sbjct: 200 GEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 259
Query: 194 NEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G + + P + E ++I ++ +C H SAA ++ G VY
Sbjct: 260 NSYGQLGTGNKSNQSYPTPVTV-----------EKDRIIEIAACHSTHTSAAKTQGGHVY 308
Query: 251 TWG 253
WG
Sbjct: 309 MWG 311
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 19/154 (12%)
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHSCALTSK 301
N E++ G G LG ++S + PRR+ +L+G K +AC G H T++
Sbjct: 40 NDEIFVLGTNCCGCLGLGDVRS---TIEPRRLDSLNG---KKIACLSYGSGPHIVLATTE 93
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
G ++ WG + QLG G T + L+P T N ++ V ACG H+LV
Sbjct: 94 GEVFTWGHNAYSQLGNG--TTNHGLVPCHISTNLSNKQVIEV-------ACGSYHSLVLT 144
Query: 362 RDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 395
DG + WGYN+ GQ + + P V C+
Sbjct: 145 SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCL 178
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 18/150 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G Q P A R +ACG+ HT + +G
Sbjct: 202 VYVWGYNGNGQLGLGNSGNQ--------PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 253
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WGAN +GQLG G + + +P V + ++ +C + T+A
Sbjct: 254 VYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSA--------AKTQGG 305
Query: 143 RLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 306 HVYMWGQCRGQSVILPHLTHFSCTDDVFAC 335
>gi|171681784|ref|XP_001905835.1| hypothetical protein [Podospora anserina S mat+]
gi|170940851|emb|CAP66501.1| unnamed protein product [Podospora anserina S mat+]
Length = 592
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 167/395 (42%), Gaps = 58/395 (14%)
Query: 62 SRWLDIACGHEHTAAVASDGTLFTWGANEFGQLG-DGTEEG------------------R 102
S + IACG H AA+ D +FTWG N+ G LG D T +G
Sbjct: 204 SNVVQIACGGMHVAALTKDNKIFTWGVNDQGALGRDTTWDGGLRDVEDEDDDSDDEDDTG 263
Query: 103 KHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWG---QNQGS-NFPRL 158
+P++ + + + G +A +T +++ WG N+G F R
Sbjct: 264 MNPKESTPAEID-TSGLPEGIEWVQVVASDSATFALTTTGQVYGWGTFRSNEGVLGFSRS 322
Query: 159 FWGAFTPNTI-----ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV 213
TP + I Q++ G H++AL E + AWG + QL R + L+
Sbjct: 323 VGIQRTPAHVPELSKIKQLAAGLNHILALDEKNKIYAWGAGQQAQLARRL----LERDDT 378
Query: 214 IKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSL--QSGDKE 271
Y + P K +++CG YH + G V +WGL + + GH G
Sbjct: 379 AALYPAGVGSLPGRAKAVKLACGSYHCFVIDTKGRVISWGLNNYAECGHEDSVGVDGGYV 438
Query: 272 LLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG---GSQAGQLGLGPQTRSFSLIP 328
+ P+ V +L G I D+A G HS A T+ G L WG G Q GQ T SF+
Sbjct: 439 MRPQIVESLSGYEIADIAGGEHHSLACTTDGKLLTWGRIDGHQVGQ-----PTGSFT--- 490
Query: 329 NESDTYF--RNIP-ILVVP------NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAAN 379
E +T + R P ILVVP V VA G H+ +DG+++ WG+++ Q
Sbjct: 491 -EDNTIYDDRQKPRILVVPTEIPEVKDVVQVAAGTDHSFAVTKDGKVYSWGFSANYQTGQ 549
Query: 380 EKSTYAWYPSPVDWCVGEVRKL--AAGGGHSAVLA 412
+ P+ +D RK+ A GG ++A
Sbjct: 550 GTTDDIESPTLIDNTAIRDRKIVFAGAGGQYGIVA 584
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 153/380 (40%), Gaps = 79/380 (20%)
Query: 23 IYVWGYNHSGQTGRKGR-ERQLRI-----------------PKQLPP---ELFGCPAGAN 61
I+ WG N G GR + LR PK+ P + G P G
Sbjct: 225 IFTWGVNDQGALGRDTTWDGGLRDVEDEDDDSDDEDDTGMNPKESTPAEIDTSGLPEGI- 283
Query: 62 SRWLDIACGHEHTAAVASDGTLFTWG---ANEFGQLGDGTEEG-RKHPEKVKQLQSEFVK 117
W+ + T A+ + G ++ WG +NE G LG G ++ P V +L +K
Sbjct: 284 -EWVQVVASDSATFALTTTGQVYGWGTFRSNE-GVLGFSRSVGIQRTPAHVPELSK--IK 339
Query: 118 SISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFW-------------GAFT 164
++ G + A+ E ++++ WG Q + R G+
Sbjct: 340 QLAAGLNHILALDE---------KNKIYAWGAGQQAQLARRLLERDDTAALYPAGVGSLP 390
Query: 165 PNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGR----GITCEGLQGPRVIKGYAKF 220
+++CGS H + G + +WG N Y + G G+ + P++++ + +
Sbjct: 391 GRAKAVKLACGSYHCFVIDTKGRVISWGLNNYAECGHEDSVGVDGGYVMRPQIVESLSGY 450
Query: 221 LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL------P 274
+I ++ GE+HS A + +G++ TWG Q+G + + + P
Sbjct: 451 --------EIADIAGGEHHSLACTTDGKLLTWGRIDGHQVGQPTGSFTEDNTIYDDRQKP 502
Query: 275 RRVVALDGI-FIKD---VACGGVHSCALTSKGALYAWGGSQAGQLGLGP--QTRSFSLIP 328
R +V I +KD VA G HS A+T G +Y+WG S Q G G S +LI
Sbjct: 503 RILVVPTEIPEVKDVVQVAAGTDHSFAVTKDGKVYSWGFSANYQTGQGTTDDIESPTLID 562
Query: 329 NESDTYFRNIPILVVPNGVQ 348
N T R+ I+ G Q
Sbjct: 563 N---TAIRDRKIVFAGAGGQ 579
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 89/219 (40%), Gaps = 43/219 (19%)
Query: 225 PELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSG---------------- 268
P + + Q++CG H AA++++ +++TWG+ G LG + G
Sbjct: 201 PNVSNVVQIACGGMHVAALTKDNKIFTWGVNDQGALGRDTTWDGGLRDVEDEDDDSDDED 260
Query: 269 -----DKELLPRRVVAL---DGIFIKDVACGGVHSCALTSKGALYAWGG--SQAGQLGLG 318
KE P + +GI V + ALT+ G +Y WG S G LG
Sbjct: 261 DTGMNPKESTPAEIDTSGLPEGIEWVQVVASDSATFALTTTGQVYGWGTFRSNEGVLGF- 319
Query: 319 PQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
+RS + + ++P L + ++ +A G +H L +I+ WG Q A
Sbjct: 320 --SRSVGIQRTPA-----HVPEL---SKIKQLAAGLNHILALDEKNKIYAWGAGQQAQLA 369
Query: 379 ----NEKSTYAWYPSPVDWCVGEVR--KLAAGGGHSAVL 411
T A YP+ V G + KLA G H V+
Sbjct: 370 RRLLERDDTAALYPAGVGSLPGRAKAVKLACGSYHCFVI 408
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 93/226 (41%), Gaps = 41/226 (18%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K+ IY WG Q R+ ER L P G G ++ + +ACG H + +
Sbjct: 354 KNKIYAWGAGQQAQLARRLLERDDT--AALYPAGVGSLPG-RAKAVKLACGSYHCFVIDT 410
Query: 80 DGTLFTWGANEFGQLGDGTEEGRK-----HPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
G + +WG N + + G G P+ V+ L + I+ G H + A
Sbjct: 411 KGRVISWGLNNYAECGHEDSVGVDGGYVMRPQIVESLSGYEIADIAGGEHHSLACT---- 466
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGAFTP-NTI---------------------ICQV 172
DG +L WG+ G + G+FT NTI + QV
Sbjct: 467 TDG-----KLLTWGRIDGHQVGQPT-GSFTEDNTIYDDRQKPRILVVPTEIPEVKDVVQV 520
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYA 218
+ G+ H A+++ G + +WG++ Q G+G T + ++ P +I A
Sbjct: 521 AAGTDHSFAVTKDGKVYSWGFSANYQTGQG-TTDDIESPTLIDNTA 565
>gi|229442453|gb|AAI72909.1| guanine nucleotide exchange factor p532 [synthetic construct]
Length = 2440
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 179/405 (44%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E K L P+L P+ ++++ I G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQE------KILQPKL--APSFSDAQ--TIEAGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA----HCTAAIAEPRENDGT 138
+ G +G+LG G + +K+ +K +S H A E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE------- 476
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG + +P+L G ++C VS G H A++E G L
Sbjct: 477 ---GEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGEL 532
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G P ++K ++ + +VSCG H+ A+S++G
Sbjct: 533 YTWGEGDFGRLGHG-DSNSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 581
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ + AL G+FI+ V G S ALTS G +Y
Sbjct: 582 TVWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVY 636
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V V+ G SH L D
Sbjct: 637 AWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-VSIGDSHCLALSHDNE 685
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P I I +V GS +AL+ G + AW
Sbjct: 583 -VWSFG---GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I VS G+ H A+S + EVY
Sbjct: 639 GCG--ACLGCGSSEATALRPKLIEELAA--------TRIVDVSIGDSHCLALSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDGI I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VSE EVY WG S QL G +E + + +A + + G + +++ G
Sbjct: 368 VSETCEVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ A G G+LGLG +L + + R+I + G HTL +
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RSIKKVSSSKG------SDGHTLAFTT 475
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+G + WG YG+ + S+ YP + + G+V ++AG HSA + +
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
>gi|145495055|ref|XP_001433521.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400639|emb|CAK66124.1| unnamed protein product [Paramecium tetraurelia]
Length = 447
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 159/361 (44%), Gaps = 56/361 (15%)
Query: 43 LRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGR 102
++IPKQL + A + W SD +F G+N+ G+LG
Sbjct: 64 IQIPKQLELQDIEQIAASKEHWF-----------AWSDTQVFGCGSNKQGKLGMNNSVNT 112
Query: 103 KHPEKVKQLQSEF---VKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQN--QGSNFPR 157
+ S++ ++ I+ G + A+ E E + +++VWG N Q F
Sbjct: 113 PTLFDIFSEASQYGWQLQKIAVGLDHSVALIEVEEEN------KIFVWGSNAYQQLGFDA 166
Query: 158 LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQG 210
P+ + I + + +A+ E G L +WG NE+G+LG+ + ++
Sbjct: 167 SEQFVAIPHQLDSDNLPRIVDIYAQHNYTMAIDEEGRLFSWGSNEFGRLGQNAFAKCMKL 226
Query: 211 PRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK 270
P I KI +++ G +H A+ G +Y+WG G GQLGH + K
Sbjct: 227 PSPITSLGNL--------KIAKLALGTFHVLAIDTQGNLYSWGRGLQGQLGHGTSNDCSK 278
Query: 271 ELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNE 330
P ++ +L I +DVACG HS AL + G++Y +G Q GQLGLG
Sbjct: 279 ---PNQISSLSSI--RDVACGEAHSMALQNNGSVYVFGSGQFGQLGLG------------ 321
Query: 331 SDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSP 390
D ++ P ++ +G +++ACG H+ V ++G + +G N Q E Y +P
Sbjct: 322 -DYKQQDAPQMLQIHG-EMIACGRHHSAVLTKNGALFMFGNNESSQLGLECGKSGAYSTP 379
Query: 391 V 391
+
Sbjct: 380 L 380
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 128/301 (42%), Gaps = 77/301 (25%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ ++ I+VWG N Q G E+ + IP QL + P R +DI H +T A
Sbjct: 145 VEEENKIFVWGSNAYQQLGFDASEQFVAIPHQLDSD--NLP-----RIVDIYAQHNYTMA 197
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ +G LF+WG+NEFG+LG Q+ F K + + T+
Sbjct: 198 IDEEGRLFSWGSNEFGRLG----------------QNAFAKCMKLPSPITS--------- 232
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEY 196
N I +++ G+ HV+A+ G L +WG
Sbjct: 233 ---------------------------LGNLKIAKLALGTFHVLAIDTQGNLYSWGRGLQ 265
Query: 197 GQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGS 256
GQLG G T P I L I V+CGE HS A+ NG VY +G G
Sbjct: 266 GQLGHG-TSNDCSKPNQISS----------LSSIRDVACGEAHSMALQNNGSVYVFGSGQ 314
Query: 257 VGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
GQLG + D +++ + G + +ACG HS LT GAL+ +G +++ QLG
Sbjct: 315 FGQLGLGDYKQQDAP----QMLQIHG---EMIACGRHHSAVLTKNGALFMFGNNESSQLG 367
Query: 317 L 317
L
Sbjct: 368 L 368
>gi|403303294|ref|XP_003942271.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Saimiri boliviensis boliviensis]
Length = 556
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 111/227 (48%), Gaps = 22/227 (9%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H+V + G + WG+N Y QLG G T GL + + +++ +V+CG
Sbjct: 115 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN--------KQVIEVACGS 166
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHSC 296
YHS ++ +GEV+ WG + GQ+G S + +PRRV L + +ACG +
Sbjct: 167 YHSLVLTSDGEVFAWGYNNSGQVGS---GSTINQPIPRRVTGCLQNKVVVTIACGQMCCM 223
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G +Y WG + GQLGLG + + R VQ VACG++H
Sbjct: 224 AVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR----------VQRVACGYAH 273
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 403
TLV +G+++ WG NSYGQ + YP+PV + ++AA
Sbjct: 274 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA 320
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 132/300 (44%), Gaps = 43/300 (14%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTAAIAEPRENDGTIS 140
+F G N G LG G + P ++ L + + +S G+ H A E
Sbjct: 72 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTE--------- 122
Query: 141 TSRLWVWGQNQGSNFPR---------LFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
++ WG N S N + +V+CGS H + L+ G + AW
Sbjct: 123 -GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAW 181
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
GYN GQ+G G T PR + G + + + ++CG+ AV ++GEVY
Sbjct: 182 GYNNSGQVGSGSTINQ-PIPRRVTG-------CLQNKVVVTIACGQMCCMAVVDSGEVYV 233
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG GQLG L + + P RV AL GI ++ VACG H+ LT +G +YAWG +
Sbjct: 234 WGYNGNGQLG---LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 290
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRIHGWG 370
GQLG G N+S+ + + +++ AC +HT + G ++ WG
Sbjct: 291 YGQLGTG----------NKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 113/243 (46%), Gaps = 39/243 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G +P + L +N + +++ACG H+ + SDG
Sbjct: 125 VFTWGHNAYSQLG-NGTTNHGLVPCHISTNL------SNKQVIEVACGSYHSLVLTSDGE 177
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P +V LQ++ V +I+CG C A+ + E
Sbjct: 178 VFAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGE------- 230
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N N P A + +V+CG H + L++ G + AWG
Sbjct: 231 --VYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 288
Query: 194 NEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G + + P + E ++I ++ +C H SAA ++ G VY
Sbjct: 289 NSYGQLGTGNKSNQSYPTPVTV-----------EKDRIIEIAACHSTHTSAAKTQGGHVY 337
Query: 251 TWG 253
WG
Sbjct: 338 MWG 340
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 71/154 (46%), Gaps = 19/154 (12%)
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHSCALTSK 301
N E++ G G LG +QS + PRR+ +L G K +AC G H T++
Sbjct: 69 NDEIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLSG---KKIACLSYGSGPHIVLATTE 122
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
G ++ WG + QLG G T + L+P T N ++ V ACG H+LV
Sbjct: 123 GEVFTWGHNAYSQLGNG--TTNHGLVPCHISTNLSNKQVIEV-------ACGSYHSLVLT 173
Query: 362 RDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 395
DG + WGYN+ GQ + + P V C+
Sbjct: 174 SDGEVFAWGYNNSGQVGSGSTINQPIPRRVTGCL 207
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 18/150 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G Q P A R +ACG+ HT + +G
Sbjct: 231 VYVWGYNGNGQLGLGNSGNQ--------PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 282
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WGAN +GQLG G + + +P V + ++ +C + T+A
Sbjct: 283 VYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSA--------AKTQGG 334
Query: 143 RLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 335 HVYMWGQCRGQSVILPHLTHFSCTDDVFAC 364
>gi|110637219|ref|YP_677426.1| alpha-tubulin suppressor [Cytophaga hutchinsonii ATCC 33406]
gi|110279900|gb|ABG58086.1| alpha-tubulin suppressor [Cytophaga hutchinsonii ATCC 33406]
Length = 461
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 164/386 (42%), Gaps = 62/386 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A S ++ WG N SGQ G + + IP Q F G WL I+ G+ H
Sbjct: 36 MKADSTLWSWGSNSSGQLGDNTTDNK-SIPSQ-----FNTAKG----WLKISSGNSHCIG 85
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG+++TWG N GQLG+G+ P ++ + ++++ ++S G + T AI +N+
Sbjct: 86 LKKDGSIWTWGWNSEGQLGNGSLTKMLVPTQIG-VDNDWM-AVSAGQYNTFAI----KNN 139
Query: 137 GTISTSRLWVWGQN---------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
GT LW G+N GSN T VS G+ H +A+ G
Sbjct: 140 GT-----LWGCGRNFEGQLGKGTTGSNVKTFI--QIGTATDWAYVSVGAFHTMAIKTDGS 192
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
L AWG N G+LG G T K + A + + + A+ +G
Sbjct: 193 LWAWGSNNNGRLGIGTTTT--------KNAPTKVGTATNWKSVYAAGSNTF---AIKTDG 241
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
++ WG G LG + L P ++ D + K ++ G S AL S G L+ W
Sbjct: 242 SLWAWGYNYAGVLGDGTTT---DRLSPVQI-GTDNNW-KTISSDGNTSFALKSDGTLWVW 296
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQLVACGHSHTLVYMRDGRI 366
G + +GQ G G T S +PI + N Q ++ +S L DG +
Sbjct: 297 GDNNSGQFGNGTTTNS-------------TLPIQIGTDNQWQHISINYSFLLAIKTDGSL 343
Query: 367 HGWGYNSYGQAANEKSTYAWYPSPVD 392
WGYN GQ N +T P VD
Sbjct: 344 WTWGYNYSGQLGNGTTTNTNLPVLVD 369
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 104/247 (42%), Gaps = 33/247 (13%)
Query: 170 CQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK 229
Q+ GS V+A+ L +WG N GQLG T K + A K
Sbjct: 24 LQIEAGSSFVIAMKADSTLWSWGSNSSGQLGDNTTDN--------KSIPSQFNTAKGWLK 75
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
I S G H + ++G ++TWG S GQLG+ SL K L+P ++ +D ++ V+
Sbjct: 76 I---SSGNSHCIGLKKDGSIWTWGWNSEGQLGNGSLT---KMLVPTQI-GVDNDWMA-VS 127
Query: 290 CGGVHSCALTSKGALYAWGGSQAGQLG---LGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
G ++ A+ + G L+ G + GQLG G ++F I +D +
Sbjct: 128 AGQYNTFAIKNNGTLWGCGRNFEGQLGKGTTGSNVKTFIQIGTATDWAY----------- 176
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGG 406
V+ G HT+ DG + WG N+ G+ +T P+ V AAG
Sbjct: 177 ---VSVGAFHTMAIKTDGSLWAWGSNNNGRLGIGTTTTKNAPTKVGTATNWKSVYAAGSN 233
Query: 407 HSAVLAD 413
A+ D
Sbjct: 234 TFAIKTD 240
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 125/352 (35%), Gaps = 92/352 (26%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPE---------------------LFGC---- 56
+I+ WG+N GQ G G ++ +P Q+ + L+GC
Sbjct: 91 SIWTWGWNSEGQLGN-GSLTKMLVPTQIGVDNDWMAVSAGQYNTFAIKNNGTLWGCGRNF 149
Query: 57 -------PAGANSR----------WLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTE 99
G+N + W ++ G HT A+ +DG+L+ WG+N G+LG GT
Sbjct: 150 EGQLGKGTTGSNVKTFIQIGTATDWAYVSVGAFHTMAIKTDGSLWAWGSNNNGRLGIGTT 209
Query: 100 EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQN------QGS 153
+ P KV + KS+ T AI + DG+ LW WG N G+
Sbjct: 210 TTKNAPTKVGTATNW--KSVYAAGSNTFAI----KTDGS-----LWAWGYNYAGVLGDGT 258
Query: 154 NFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV 213
RL + +S AL G L WG N GQ G G T
Sbjct: 259 TTDRLSPVQIGTDNNWKTISSDGNTSFALKSDGTLWVWGDNNSGQFGNGTTTN------- 311
Query: 214 IKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG------------ 261
+ + + +S A+ +G ++TWG GQLG
Sbjct: 312 ----STLPIQIGTDNQWQHISINYSFLLAIKTDGSLWTWGYNYSGQLGNGTTTNTNLPVL 367
Query: 262 ---------HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
H ++ S + + P I IK+ A +H + S G +
Sbjct: 368 VDCNLSLKVHEAISSENIVVYPNPTAGELTIKIKNQAAQNIHITIMNSVGQI 419
>gi|355692784|gb|EHH27387.1| hypothetical protein EGK_17574 [Macaca mulatta]
Length = 4862
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 173/382 (45%), Gaps = 79/382 (20%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI--- 139
++ WGA GQL E GR + + CG +CT I + +GT+
Sbjct: 3999 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVI----QANGTVLAC 4051
Query: 140 ---STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQV--SCGSV-HVVALSECGLLQAWGY 193
S RL GQ + L + ++ Q+ SCGS H +AL+E G + +WG
Sbjct: 4052 GEGSYGRL---GQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
+YG+LG G + + PR I EA + E++ Q+SCG HSA V+ +G+++T+G
Sbjct: 4109 GDYGKLGHG-NSDRQRRPRQI--------EALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4159
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL-YAWGGSQA 312
G G+LG L + + LP RV AL+G I VACG H+ A+++ G++ +A+G
Sbjct: 4160 NGDYGRLG---LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4216
Query: 313 GQLGLGPQTRSFSLIPNESDTY--------------------------FRNIPILVVPNG 346
G+LGLG T S P + D F ++ +P G
Sbjct: 4217 GKLGLGNSTAKSS--PQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4274
Query: 347 ------------------VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYP 388
++ VA G HTL +G ++ WG NS GQ + + P
Sbjct: 4275 RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP 4334
Query: 389 SPVDWCVGE-VRKLAAGGGHSA 409
+ V G+ +R+++AG HSA
Sbjct: 4335 TLVTGLQGKNIRQISAGRCHSA 4356
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 186/405 (45%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ P+L P+ ++++ I G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQ------PKL--APSFSDAQ--TIEAGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG----T 138
+ G +G+LG G + +K+L E +SI ++ + +DG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQS---TLKKLTFEPHRSIK-------KVSSSKGSDGHTLAF 473
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ ++ WG + +P+L G ++C VS G H A++E G L
Sbjct: 474 TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGEL 532
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G + P ++K ++ + +VSCG H+ A+S++G
Sbjct: 533 YTWGEGDFGRLGHGDS-NSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 581
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ + AL G+FI+ V G S ALTS G +Y
Sbjct: 582 TVWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVY 636
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V V+ G SH L D
Sbjct: 637 AWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-VSIGDSHCLALSHDNE 685
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 166/377 (44%), Gaps = 85/377 (22%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPP-------- 51
MD + T+RP D ++ K +Y+WG GQ GR + +P P
Sbjct: 3976 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMVPAAAPSFSQAQQVI 4033
Query: 52 -------------ELFGCPAGANSRW------------------------LDIACGHE-H 73
+ C G+ R L +CG + H
Sbjct: 4034 CGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGH 4093
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
+ A+ G +F+WG ++G+LG G + ++ P +++ LQ E V +SCG +A +
Sbjct: 4094 SMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT--- 4150
Query: 134 ENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-----------ICQVSCGSVHVVAL 182
+DG +L+ +G ++ RL G + + I QV+CG H +A+
Sbjct: 4151 -SDG-----KLFTFGNG---DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV 4201
Query: 183 SECG-LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
S G ++ A+G +YG+LG G P+ I I +V+CG S
Sbjct: 4202 SADGSMVWAFGDGDYGKLGLG-NSTAKSSPQKIDVLCGI--------GIKKVACGTQFSV 4252
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A++++G VYT+G + L ++ ++ P+++ L G+ I+DVA G H+ AL S
Sbjct: 4253 ALTKDGHVYTFGQDRLIGLPEGRARNHNR---PQQIPVLAGMIIEDVAVGAEHTLALASN 4309
Query: 302 GALYAWGGSQAGQLGLG 318
G +YAWG + GQLGLG
Sbjct: 4310 GDVYAWGSNSEGQLGLG 4326
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 143/307 (46%), Gaps = 43/307 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V SDG
Sbjct: 4103 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTSDGK 4154
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG++
Sbjct: 4155 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA----DGSM--- 4207
Query: 143 RLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T P I I +V+CG+ VAL++ G + +
Sbjct: 4208 -VWAFGDG---DYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4263
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ I A + I V+ G H+ A++ NG+VY
Sbjct: 4264 GQDRLIGLPEG-RARNHNRPQQIPVLAGMI--------IEDVAVGAEHTLALASNGDVYA 4314
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWGGS 310
WG S GQLG L + P V L G I+ ++ G HS A T+ A G S
Sbjct: 4315 WGSNSEGQLG---LGHTNHVREPTLVTGLQGKNIRQISAGRCHSAAWTAPPVPPRAPGVS 4371
Query: 311 QAGQLGL 317
QLGL
Sbjct: 4372 VPLQLGL 4378
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P I I +V GS +AL+ G + AW
Sbjct: 583 -VWSFG---GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I VS G+ H A+S + EVY
Sbjct: 639 GCG--ACLGCGSSEATALRPKLIEELAA--------TRIVDVSIGDSHCLALSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDGI I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 30/228 (13%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +GQL G V+ A AP + QV CG+ + + NG V
Sbjct: 4002 WGAGRHGQLAEA-------GRNVMVPAA-----APSFSQAQQVICGQNCTFVIQANGTVL 4049
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGALYAW 307
G GS G+LG + S D +L + AL G + + +CG HS ALT G +++W
Sbjct: 4050 ACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSW 4106
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G R R I L VQ+ +CG H+ V DG++
Sbjct: 4107 GDGDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLF 4156
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
+G YG+ ++ P V G ++ ++A G H+ AV AD
Sbjct: 4157 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 4204
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VSE EVY WG S QL G +E + + +A + + G + +++ G
Sbjct: 368 VSETCEVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ A G G+LGLG +L + + R+I + G HTL +
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RSIKKVSSSKG------SDGHTLAFTT 475
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+G + WG YG+ + S+ YP + + G+V ++AG HSA + +
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
>gi|395770833|ref|ZP_10451348.1| hypothetical protein Saci8_13710 [Streptomyces acidiscabies 84-104]
Length = 393
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 152/373 (40%), Gaps = 49/373 (13%)
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
T+ +WGA GQLG+GT P V L V +S G +A D T+
Sbjct: 31 TVLSWGAGRTGQLGNGTLSDSLSPASVTSLFRGDVDQMSAGGTSSADSFTLARTDKTVK- 89
Query: 142 SRLWVWGQN------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNE 195
WG N G N + T + ++ G H +AL G + +WG N
Sbjct: 90 ----AWGHNSAGQLGNGGNTNQAVPTTVPRLTNVKDIAAGGKHALALDTSGQVYSWGDNS 145
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
YGQLG T + P ++G + K Q+S G S A+ ENG+VY WG G
Sbjct: 146 YGQLGNNRTGDSRTVPDRVQG----------MPKAKQISAGCDFSLALLENGKVYAWGRG 195
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
GQLG + + +PR+V L+ I D C H+ A+T+ + +WG + GQL
Sbjct: 196 IHGQLGTGNRATSS---VPRQVTGLEDIVKIDAGC--YHALAITADNTVKSWGYNLYGQL 250
Query: 316 GLGPQTRSFSLIPNESDTYFRNIPILVV-PNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
G S T +P+ V V + G H D ++GWG N Y
Sbjct: 251 G-------------NSATKSSTVPVDVDWLTDVSDIEAGAWHNYAMTSDSHVYGWGNNQY 297
Query: 375 G------QAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA--DACSLKELCEFRL 425
G QA + + +PV+ E V+ LAAG H + D + E +L
Sbjct: 298 GQLLEGDQADGDNISRTNRTAPVEIPRLEGVQHLAAGARHGVAVTADDVFTWGNNSEGQL 357
Query: 426 AESVTLSNASEIE 438
T+S ++
Sbjct: 358 GNGTTVSRFDSVK 370
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 138/321 (42%), Gaps = 55/321 (17%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+ WG+N +GQ G G Q +P +P L DIA G +H A+ + G
Sbjct: 88 VKAWGHNSAGQLGNGGNTNQA-VPTTVP-RLTNVK--------DIAAGGKHALALDTSGQ 137
Query: 83 LFTWGANEFGQLGDG-TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+++WG N +GQLG+ T + R P++V+ + K IS G + A+ E
Sbjct: 138 VYSWGDNSYGQLGNNRTGDSRTVPDRVQGMPK--AKQISAGCDFSLALLE---------N 186
Query: 142 SRLWVWGQ----------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
+++ WG+ S+ PR G I ++ G H +A++ +++W
Sbjct: 187 GKVYAWGRGIHGQLGTGNRATSSVPRQVTGLED----IVKIDAGCYHALAITADNTVKSW 242
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
GYN YGQLG T + + L ++ + G +H+ A++ + VY
Sbjct: 243 GYNLYGQLGNSATKS-----------STVPVDVDWLTDVSDIEAGAWHNYAMTSDSHVYG 291
Query: 252 WGLGSVGQLGHCSLQSGD-----KELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
WG GQL GD P + L+G ++ +A G H A+T+ ++
Sbjct: 292 WGNNQYGQLLEGDQADGDNISRTNRTAPVEIPRLEG--VQHLAAGARHGVAVTAD-DVFT 348
Query: 307 WGGSQAGQLGLGPQTRSFSLI 327
WG + GQLG G F +
Sbjct: 349 WGNNSEGQLGNGTTVSRFDSV 369
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 81/209 (38%), Gaps = 40/209 (19%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG GQ G R +P ++ G + I G H A+ +D T
Sbjct: 189 VYAWGRGIHGQLGTGNRA-----TSSVPRQVTGL-----EDIVKIDAGCYHALAITADNT 238
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ +WG N +GQLG+ + P V L V I GA A+ S S
Sbjct: 239 VKSWGYNLYGQLGNSATKSSTVPVDVDWLTD--VSDIEAGAWHNYAM---------TSDS 287
Query: 143 RLWVWGQNQ-----------GSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECG 186
++ WG NQ G N R A P I + ++ G+ H VA++
Sbjct: 288 HVYGWGNNQYGQLLEGDQADGDNISRTNRTA--PVEIPRLEGVQHLAAGARHGVAVTADD 345
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIK 215
+ WG N GQLG G T ++++
Sbjct: 346 VF-TWGNNSEGQLGNGTTVSRFDSVKILQ 373
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 53/125 (42%), Gaps = 28/125 (22%)
Query: 17 IPAKSAIYVWGYNHSGQ-----------TGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ + S +Y WG N GQ R R + IP+ L G
Sbjct: 283 MTSDSHVYGWGNNQYGQLLEGDQADGDNISRTNRTAPVEIPR-----LEGVQ-------- 329
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSI--SCGA 123
+A G H AV +D +FTWG N GQLG+GT R K+ Q + +K++ S G
Sbjct: 330 HLAAGARHGVAVTAD-DVFTWGNNSEGQLGNGTTVSRFDSVKILQ-EGSAIKNVTASLGG 387
Query: 124 HCTAA 128
+ T A
Sbjct: 388 NTTYA 392
>gi|330800861|ref|XP_003288451.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
gi|325081510|gb|EGC35023.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
Length = 1909
Score = 114 bits (284), Expect = 2e-22, Method: Composition-based stats.
Identities = 100/360 (27%), Positives = 153/360 (42%), Gaps = 56/360 (15%)
Query: 73 HTAAVASDGT--LFTWGANEFGQLG---DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTA 127
H +A+ D + L TWG+ +LG E+ + PE++ + SIS G++ +A
Sbjct: 588 HRSAIHLDTSRGLMTWGSASNCKLGFKVASKEQSQPTPERLPNFNVSDICSISSGSYYSA 647
Query: 128 AIAEPRENDGTISTSRLWVWGQNQGSNFP-----------RLFWGAFTPNTIICQVSCGS 176
A+ E +++WG+ N P +L T I VS G
Sbjct: 648 ALTE---------NGDVYMWGRGSVKNPPVPVLGIPQIEDQLLPIKLESLTDIVVVSIGF 698
Query: 177 VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCG 236
H A+ G L WG E GQLG G T ++ P+VI+ F ITQV CG
Sbjct: 699 YHSAAVRANGELLTWGVGEEGQLGHGDTQNQVE-PKVIQSLTSFW--------ITQVQCG 749
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSC 296
E H+ +++NG+VYTWG GQLG L + P V AL+ + +A G H
Sbjct: 750 EKHTICLTKNGKVYTWGSSEYGQLG---LGDTTRYCKPMPVTALEKYNVLQIASGSTHCA 806
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
LT+ + +G A +G +L+P S Y + + CGH
Sbjct: 807 VLTNSKEVLVFGNGAA--MGAASIISIPTLVP--SLKYLH----------IDKLCCGHYS 852
Query: 357 TLVYMRDGRIHGWGY-NSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADA 414
T G ++ WG G N+ + P V+ + +R+++ GG H+A L D+
Sbjct: 853 TAAISECGDVYTWGTGQELGHGNNQTES---TPKLVEALRNQSIRQISCGGRHTAFLTDS 909
Score = 107 bits (267), Expect = 1e-20, Method: Composition-based stats.
Identities = 76/261 (29%), Positives = 121/261 (46%), Gaps = 41/261 (15%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++ G H+AAV ++G L TWG E GQLG G + + P+ ++ L S ++ + CG T
Sbjct: 694 VSIGFYHSAAVRANGELLTWGVGEEGQLGHGDTQNQVEPKVIQSLTSFWITQVQCGEKHT 753
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT------PNTI-----ICQVSCG 175
+ + +++ WG S + +L G T P T + Q++ G
Sbjct: 754 ICLTK---------NGKVYTWGS---SEYGQLGLGDTTRYCKPMPVTALEKYNVLQIASG 801
Query: 176 SVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC 235
S H L+ + +G G + + + K+L I ++ C
Sbjct: 802 STHCAVLTNSKEVLVFGN------GAAMGAASIISIPTLVPSLKYL-------HIDKLCC 848
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHS 295
G Y +AA+SE G+VYTWG G +LGH + Q+ E P+ V AL I+ ++CGG H+
Sbjct: 849 GHYSTAAISECGDVYTWGTGQ--ELGHGNNQT---ESTPKLVEALRNQSIRQISCGGRHT 903
Query: 296 CALTSKGALYAWGGSQAGQLG 316
LT G ++ G GQLG
Sbjct: 904 AFLTDSGRIFTSGKDSFGQLG 924
Score = 102 bits (253), Expect = 6e-19, Method: Composition-based stats.
Identities = 78/290 (26%), Positives = 130/290 (44%), Gaps = 44/290 (15%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL-DIACGHEHTA 75
+ A + WG GQ G + Q+ PK + S W+ + CG +HT
Sbjct: 704 VRANGELLTWGVGEEGQLGHGDTQNQVE-PKVI--------QSLTSFWITQVQCGEKHTI 754
Query: 76 AVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREN 135
+ +G ++TWG++E+GQLG G P V L+ V I+ G+ A + +E
Sbjct: 755 CLTKNGKVYTWGSSEYGQLGLGDTTRYCKPMPVTALEKYNVLQIASGSTHCAVLTNSKE- 813
Query: 136 DGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
+ V+G + P + I ++ CG A+SECG +
Sbjct: 814 --------VLVFGNGAAMGAASII---SIPTLVPSLKYLHIDKLCCGHYSTAAISECGDV 862
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG + +LG G + P+++ EA + I Q+SCG H+A ++++G
Sbjct: 863 YTWGTGQ--ELGHG-NNQTESTPKLV--------EALRNQSIRQISCGGRHTAFLTDSGR 911
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
++T G S GQLGH Q+GD+ P+++ +L V+CG ++ AL
Sbjct: 912 IFTSGKDSFGQLGH---QAGDQN-KPKKIESLTKTTFISVSCGENYNIAL 957
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.135 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,064,689,754
Number of Sequences: 23463169
Number of extensions: 348272386
Number of successful extensions: 925374
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4247
Number of HSP's successfully gapped in prelim test: 1497
Number of HSP's that attempted gapping in prelim test: 788439
Number of HSP's gapped (non-prelim): 41803
length of query: 477
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 331
effective length of database: 8,933,572,693
effective search space: 2957012561383
effective search space used: 2957012561383
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 79 (35.0 bits)