BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011798
(477 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FN03|UVR8_ARATH Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1
SV=1
Length = 440
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/323 (33%), Positives = 164/323 (50%), Gaps = 44/323 (13%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
L I+ G H+ A+ S + +WG E GQLG G E R P ++ L + S++CGA
Sbjct: 18 LIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGAD 77
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVS 173
T A ++ S ++ WG +F RL G FTP I I Q++
Sbjct: 78 HTVAYSQ--------SGMEVYSWGWG---DFGRLGHGNSSDLFTPLPIKALHGIRIKQIA 126
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
CG H +A++ G +Q+WG N+ GQLG G T + L P+ I+ + E +I V
Sbjct: 127 CGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV-PQKIQAF--------EGIRIKMV 177
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
+ G H+AAV+E+G++Y WG G G LG L L+P RV + G + VACG
Sbjct: 178 AAGAEHTAAVTEDGDLYGWGWGRYGNLG---LGDRTDRLVPERVTSTGGEKMSMVACGWR 234
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG 353
H+ +++ GALY +G S+ GQLG G LIP++ + + + ++ G
Sbjct: 235 HTISVSYSGALYTYGWSKYGQLGHGDLED--HLIPHKLEALSNSF--------ISQISGG 284
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQ 376
HT+ DG+++GWG+N +GQ
Sbjct: 285 WRHTMALTSDGKLYGWGWNKFGQ 307
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 172/383 (44%), Gaps = 62/383 (16%)
Query: 26 WGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT-LF 84
WG GQ G E + P QL A + + + CG +HT A + G ++
Sbjct: 39 WGRGEDGQLGHGDAEDRPS-PTQLS-------ALDGHQIVSVTCGADHTVAYSQSGMEVY 90
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG-AHCTAAIAEPRENDGTISTSR 143
+WG +FG+LG G P +K L +K I+CG +HC A E G + +
Sbjct: 91 SWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTME-----GEVQS-- 143
Query: 144 LWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAWG 192
WG+NQ +L G + P I I V+ G+ H A++E G L WG
Sbjct: 144 ---WGRNQNG---QLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWG 197
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
+ YG LG G + L RV EK++ V+CG H+ +VS +G +YT+
Sbjct: 198 WGRYGNLGLGDRTDRLVPERVTSTGG---------EKMSMVACGWRHTISVSYSGALYTY 248
Query: 253 GLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQA 312
G GQLGH L+ L+P ++ AL FI ++ G H+ ALTS G LY WG ++
Sbjct: 249 GWSKYGQLGHGDLE---DHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKF 305
Query: 313 GQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPNGVQLV--ACGHSHTLVYMRDGRIHGW 369
GQ+G+G S P+ V P+ ++V +CG HTL + W
Sbjct: 306 GQVGVGNNLDQCS-------------PVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAW 352
Query: 370 GYNSYGQAANEKSTYAWYPSPVD 392
G + GQ +S +P ++
Sbjct: 353 GRGTNGQLGIGESVDRNFPKIIE 375
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 150/313 (47%), Gaps = 36/313 (11%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPE-LFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG+ G+ G G L P LP + L G R IACG H AV +G
Sbjct: 89 VYSWGWGDFGRLGH-GNSSDLFTP--LPIKALHGI------RIKQIACGDSHCLAVTMEG 139
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+ +WG N+ GQLG G E P+K++ + +K ++ GA TAA+ E DG +
Sbjct: 140 EVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE----DGDLYG 195
Query: 142 SRLWVWGQ----NQGSNFPRLFWGAFTPN--TIICQVSCGSVHVVALSECGLLQAWGYNE 195
W WG+ G RL T + V+CG H +++S G L +G+++
Sbjct: 196 ---WGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSK 252
Query: 196 YGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLG 255
YGQLG G + L ++ EA I+Q+S G H+ A++ +G++Y WG
Sbjct: 253 YGQLGHGDLEDHLIPHKL---------EALSNSFISQISGGWRHTMALTSDGKLYGWGWN 303
Query: 256 SVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQL 315
GQ+G + + + P +V D + V+CG H+ A+T + ++AWG GQL
Sbjct: 304 KFGQVG---VGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQL 360
Query: 316 GLGPQT-RSFSLI 327
G+G R+F I
Sbjct: 361 GIGESVDRNFPKI 373
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 115/242 (47%), Gaps = 23/242 (9%)
Query: 165 PNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
P + +S G+ H VAL ++ +WG E GQLG G E P + A
Sbjct: 13 PPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLS--------A 63
Query: 225 PELEKITQVSCGEYHSAAVSENG-EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
+ +I V+CG H+ A S++G EVY+WG G G+LGH + P + AL GI
Sbjct: 64 LDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGN---SSDLFTPLPIKALHGI 120
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
IK +ACG H A+T +G + +WG +Q GQLGLG S L+P + F I I
Sbjct: 121 RIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDS--LVPQKIQA-FEGIRI--- 174
Query: 344 PNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 403
++VA G HT DG ++GWG+ YG T P V GE + A
Sbjct: 175 ----KMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVA 230
Query: 404 GG 405
G
Sbjct: 231 CG 232
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 90/193 (46%), Gaps = 19/193 (9%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPR--RVVALDGIFIK 286
K+ +S G HS A+ V +WG G GQLGH GD E P ++ ALDG I
Sbjct: 16 KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGH-----GDAEDRPSPTQLSALDGHQIV 70
Query: 287 DVACGGVHSCALTSKGA-LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
V CG H+ A + G +Y+WG G+LG G + F+ +P ++ R
Sbjct: 71 SVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIR--------- 121
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAG 404
++ +ACG SH L +G + WG N GQ + + P + G ++ +AAG
Sbjct: 122 -IKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAG 180
Query: 405 GGHSAVLADACSL 417
H+A + + L
Sbjct: 181 AEHTAAVTEDGDL 193
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 12/124 (9%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y WG+N GQ G Q + P+ + + + ++CG HT A
Sbjct: 291 LTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPD--------DQKVVQVSCGWRHTLA 342
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V +F WG GQLG G R P+ ++ L + + G H ++ +P
Sbjct: 343 VTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVDG----ASGQHIESSNIDPSSGK 398
Query: 137 GTIS 140
+S
Sbjct: 399 SWVS 402
>sp|Q5GLZ8|HERC4_HUMAN Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4
PE=1 SV=1
Length = 1057
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 175/376 (46%), Gaps = 45/376 (11%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N R D+ CG HT V DGT++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRK--SDFF-----INKRVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLVGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
C+ P+++K QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 TDCKKQTSPQLLKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA----WYP 388
+N KS + WYP
Sbjct: 332 TSNRKSPFTVKGNWYP 347
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG FGQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGTDCKKQTS-----PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFV 310
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 126/256 (49%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLVGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG GT+ + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +T+++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTEIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + + + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GTDCKKQTSPQLLKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVAL-SECGLLQAWGYN 194
T +GQ N S+ PR + +I+ +++CG H A G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTEIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>sp|Q5PQN1|HERC4_RAT Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus
GN=Herc4 PE=2 SV=1
Length = 1057
Score = 142 bits (359), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 112/369 (30%), Positives = 173/369 (46%), Gaps = 41/369 (11%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRK--SDFF-----VNKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + ++SCG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLQGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
I C+ P++IK QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 IECQKQTSPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V +ACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA 385
+N KS +
Sbjct: 332 TSNRKSPFT 340
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG +GQLG G EE P K ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I VSCG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGIECQKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G +G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLQGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG G E + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQ++CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQIACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G E Q + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GIECQKQTSPQLIKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYN 194
T +GQ N S+ PR + +I+ Q++CG H A + G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>sp|Q6PAV2|HERC4_MOUSE Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4
PE=2 SV=2
Length = 1057
Score = 142 bits (358), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 112/369 (30%), Positives = 173/369 (46%), Gaps = 41/369 (11%)
Query: 26 WGYNHSGQTGRKGRERQLRI-PKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLF 84
WG GQ G G + ++ + P++ + F N + D+ CG HT V DGT++
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRR--SDFF-----VNKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 85 TWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND--GTISTS 142
T G N+ GQLG E+ RK PE+V L ++ + +++CG T A+ + + G S
Sbjct: 57 TCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDG 114
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
+L + G + PR + I QV+CG H +ALS+ + WG N+YGQLG G
Sbjct: 115 QLGLQGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
I C+ P++IK QV+ G HS ++ +G ++ WG GQLG
Sbjct: 173 IDCQKQTSPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG- 223
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
L + +P + +L I + CG H+ ALT +G ++ +G GQ LG +
Sbjct: 224 --LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNST 279
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM-RDGRIHGWGYNSYGQ----- 376
S + P + +I V VACG HT ++ GRI+ +G GQ
Sbjct: 280 SHEINPRKVFELMGSI--------VTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 377 AANEKSTYA 385
+N KS +
Sbjct: 332 TSNRKSPFT 340
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 83 LFTWGANEFGQLGDG--TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG +GQLG G EE P + ++ V+ + CG T + + DGT+
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLD----DGTVY 56
Query: 141 T---SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T + L G + P N I V+CG H +AL++ G + AWG + G
Sbjct: 57 TCGCNDLGQLGHEKSRKKPEQVVALDAQN--IVAVACGEAHTLALNDKGQVYAWGLDSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG + E ++ PR IK + +I QV+CG YHS A+S+ EV+ WG
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDI--------QIVQVACGYYHSLALSKASEVFCWGQNKY 166
Query: 258 GQLG---HCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG C Q+ P+ + +L GI VA GG HS LT GA++ WG ++ GQ
Sbjct: 167 GQLGLGIDCQKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LGL +E+D Y N+ + + + CG HT ++G + +G Y
Sbjct: 222 LGLN----------DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
GQ + +++ P V +G V ++A G H++
Sbjct: 272 GQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFV 310
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 43/256 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K +Y WG + GQ G +G E +R+P+ + + ++ + + +ACG+ H+ A++
Sbjct: 102 KGQVYAWGLDSDGQLGLQGSEECIRVPRNI-------KSLSDIQIVQVACGYYHSLALSK 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQS-EFVKSISCGAHCTAAIAEPRENDG 137
+F WG N++GQLG G + + + P+ +K L F++ + GAH
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVL--------- 205
Query: 138 TISTSRLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECG 186
T+S + ++ WG+N+ F +L + PN + I + CG H AL++ G
Sbjct: 206 TLSGA-IFGWGRNK---FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSE 245
+ +G YGQLG T + +V + +TQV+CG H++A V
Sbjct: 262 GVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI---------VTQVACGRQHTSAFVPS 312
Query: 246 NGEVYTWGLGSVGQLG 261
+G +Y++GLG GQLG
Sbjct: 313 SGRIYSFGLGGNGQLG 328
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S ++ WG N GQ G G + Q + QL L G P ++ +A G H+ +
Sbjct: 156 SEVFCWGQNKYGQLGL-GIDCQKQTSPQLIKSLLGIP------FMQVAAGGAHSFVLTLS 208
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
G +F WG N+FGQLG E R P +K L+S+ + I CG TAA+ + +G +
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK----EGGVF 264
Query: 141 TSRLWVWGQ---NQGSN--FPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYN 194
T +GQ N S+ PR + +I+ QV+CG H A + G + ++G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELM--GSIVTQVACGRQHTSAFVPSSGRIYSFGLG 322
Query: 195 EYGQLGRGITCEGLQGPRVIKG 216
GQLG G T + P +KG
Sbjct: 323 GNGQLGTGSTSNR-KSPFTVKG 343
>sp|Q15034|HERC3_HUMAN Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3
PE=1 SV=1
Length = 1050
Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 153/312 (49%), Gaps = 52/312 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G N GQ G ER+ P+Q+ A A+ + +ACG H+ A++ G
Sbjct: 55 VYTCGLNTKGQLGH---EREGNKPEQIG-------ALADQHIIHVACGESHSLALSDRGQ 104
Query: 83 LFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGA-HCTAAIAEPRENDGTIS 140
LF+WGA GQLG TE+ P +++L + + +SCG HC A A DG
Sbjct: 105 LFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA-----DG--- 156
Query: 141 TSRLWVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
+ + WG+N G FP +P + + QV+ G H ALS G
Sbjct: 157 --QFFTWGKNSHGQLGLGKEFP----SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 210
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ WG N GQLG + R + K L +K+ +SCGE H+A ++++G
Sbjct: 211 VFGWGMNNAGQLGLSD-----EKDRESPCHVKLL----RTQKVVYISCGEEHTAVLTKSG 261
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALT-SKGALYA 306
V+T+G GS GQLGH S+ + E+ PRRV+ L G + +ACG H+ A S G +YA
Sbjct: 262 GVFTFGAGSCGQLGHDSM---NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 307 WGGSQAGQLGLG 318
+G GQLG G
Sbjct: 319 FGCGARGQLGTG 330
Score = 125 bits (314), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 161/341 (47%), Gaps = 32/341 (9%)
Query: 83 LFTWGANEFGQLGDGTE-EG-RKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+ WG GQ G T +G P+ + VK ++CG + + + E DG +
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLE----DGEVY 56
Query: 141 TSRLWVWGQ---NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYG 197
T L GQ + N P GA II V+CG H +ALS+ G L +WG G
Sbjct: 57 TCGLNTKGQLGHEREGNKPEQI-GALADQHII-HVACGESHSLALSDRGQLFSWGAGSDG 114
Query: 198 QLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSV 257
QLG T + + PR+I+ + + I QVSCG +H A++ +G+ +TWG S
Sbjct: 115 QLGLMTTEDSVAVPRLIQKLNQ--------QTILQVSCGNWHCLALAADGQFFTWGKNSH 166
Query: 258 GQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GQLG + + P+RV +L+GI + VA GG HS AL+ GA++ WG + AGQLGL
Sbjct: 167 GQLGLG--KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+ ES + + L+ V ++CG HT V + G + +G S GQ
Sbjct: 225 SDEKD------RESPCHVK----LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQL 274
Query: 378 ANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADACSL 417
++ P V +G EV ++A G H+ + L
Sbjct: 275 GHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGL 315
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 35/252 (13%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
+ ++ WG GQ G E + +P+ + L ++CG+ H A+A+
Sbjct: 102 RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL-------NQQTILQVSCGNWHCLALAA 154
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG FTWG N GQLG G E + P++V+ L+ + ++ G + A++
Sbjct: 155 DGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-------- 206
Query: 139 ISTSRLWVWGQNQGSNF--------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQA 190
+ ++ WG N + +SCG H L++ G +
Sbjct: 207 -LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFT 265
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEV 249
+G GQLG + + RV++ ++TQ++CG H+ A V +G +
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGS---------EVTQIACGRQHTLAFVPSSGLI 316
Query: 250 YTWGLGSVGQLG 261
Y +G G+ GQLG
Sbjct: 317 YAFGCGARGQLG 328
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPE----LFGCPAGANSRWLDIACGHE 72
+ A + WG N GQ G G+E P Q P+ L G P +A G
Sbjct: 152 LAADGQFFTWGKNSHGQLGL-GKE----FPSQASPQRVRSLEGIPLA------QVAAGGA 200
Query: 73 HTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEP 132
H+ A++ G +F WG N GQLG E+ R+ P VK L+++ V ISCG TA + +
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260
Query: 133 --RENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQ 189
G S +L N N PR + + Q++CG H +A + GL+
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELM--GSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGY 217
A+G GQLG G TC ++ P +KGY
Sbjct: 318 AFGCGARGQLGTGHTC-NVKCPSPVKGY 344
>sp|P28745|RCC1_SCHPO Protein pim1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pim1 PE=1 SV=2
Length = 539
Score = 125 bits (315), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 119/444 (26%), Positives = 195/444 (43%), Gaps = 70/444 (15%)
Query: 10 TARPVDNIPA----KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+A+ ++ IP + +YV+G + G E + +L P L G +
Sbjct: 56 SAKRINKIPELPTERLNVYVFGSGSMNELGMGEEEMDVVYRPRLNPILSTDKVGV----V 111
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKH-------------PEKVKQLQ 112
D+A G H+AA++ DG ++TWG N+ LG T++ + P KV+
Sbjct: 112 DLAVGGMHSAALSHDGRVYTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGAL 171
Query: 113 SEF-VKSISCGAHCTAAIAEP---------RENDGTISTSRLWVWGQNQGSNFPRLFWGA 162
S V + C + TAAI + R +DG + S Q + + ++
Sbjct: 172 SHLRVTKVICSDNLTAAITDNGCCFTWGTFRCSDGVLGYSD----SQKRTAEPTQMRLPE 227
Query: 163 FTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG-ITCEGLQGPRVIKGYAKFL 221
ICQ++ G+ H++AL+ G + WG + QLGR + LQG
Sbjct: 228 ------ICQLATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQG---------LT 272
Query: 222 DEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE-----LLPRR 276
+ L+ I V G YHS A+ G VY WGL Q C ++ D+E P
Sbjct: 273 PQPLALKNIISVGAGSYHSFAIDNKGRVYAWGLNITRQ---CGIEVEDEEEGAVITKPTL 329
Query: 277 VVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNES-DTYF 335
V AL+G +K + G H+ AL G + AWG QLG+ +++ +E + Y+
Sbjct: 330 VDALEGYNVKSITGGEHHTLALLEDGRVLAWGRDDRHQLGIPDNALPETVVKDEKGNNYY 389
Query: 336 RNIPILV--VPNGVQLVACGHSHTLVYMRDGRIHGWGYN---SYGQAANEKSTYAWYPSP 390
+ P ++ + N +Q+V CG H L DG+++ WG GQ N++ P+
Sbjct: 390 LSTPTIIPGLTNVIQVV-CGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDEDVAV--PTL 446
Query: 391 V-DWCVGEVR-KLAAGGGHSAVLA 412
V + EV ++A GG +++A
Sbjct: 447 VRSKAIKEVAIRVAGAGGQFSIIA 470
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 18/111 (16%)
Query: 208 LQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQS 267
L P + G AK +++ PEL +E VY +G GS+ +LG +
Sbjct: 47 LPKPVRVPGSAKRINKIPELP---------------TERLNVYVFGSGSMNELGMGE-EE 90
Query: 268 GDKELLPRR--VVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLG 316
D PR +++ D + + D+A GG+HS AL+ G +Y WG + LG
Sbjct: 91 MDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRVYTWGVNDDYALG 141
>sp|Q9R0X5|RPGR_MOUSE X-linked retinitis pigmentosa GTPase regulator OS=Mus musculus
GN=Rpgr PE=1 SV=2
Length = 1001
Score = 125 bits (313), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 114/367 (31%), Positives = 173/367 (47%), Gaps = 62/367 (16%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++CG EHTA V + L+ +G+N +GQLG G++ P +K L+ E VK +CG + T
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 99
Query: 127 AAIAEPRENDGTISTSRLWVW---GQNQG----------SNFPRLFWGAFTPNTIICQVS 173
+ST V+ G N+G F ++ + FTP I Q+S
Sbjct: 100 L-----------VSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVF--FTPADTIKQLS 146
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
G+ AL+E G L WG N GQ+G V G + I+ +
Sbjct: 147 AGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVG-----------KPISWI 195
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL-----PRRVVALDGIFIKDV 288
SCG YHSA V+ +GE+YT+G G+LG + ELL P+RV+ + I+ V
Sbjct: 196 SCGYYHSAFVTMDGELYTFGEPENGKLGLPN------ELLMNHRSPQRVLGIPERVIQ-V 248
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
ACGG H+ LT K +YA+G Q GQLGLG +F +E R + +
Sbjct: 249 ACGGGHTVVLTEK-VVYAFGLGQFGQLGLG----TFLFETSEPKIIER-----IKDQKIC 298
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQ--AANEKSTYAWYPSP-VDWCVGEVRKLAAGG 405
++CG +HT + G ++ +G +G+ E T ++P+ ++ V+ +A GG
Sbjct: 299 HISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGG 358
Query: 406 GHSAVLA 412
H V A
Sbjct: 359 CHMLVFA 365
Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 124/278 (44%), Gaps = 29/278 (10%)
Query: 141 TSRLWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
T ++ +G+ + N P FW F + IC +SCG H ++ L +G N +GQL
Sbjct: 11 TGAVFTFGKTKFAENIPSKFW--FKNDIPIC-LSCGDEHTAIVTGNNKLYMFGSNNWGQL 67
Query: 200 GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ 259
G G + P IK A + EK+ +CG H+ ++ G VY G + GQ
Sbjct: 68 GLGSKA-AIIKPTCIK--------ALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQ 118
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LG + D++ + V IK ++ G S ALT G L+ WG + GQ+GL
Sbjct: 119 LGLGD--TDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGL-- 174
Query: 320 QTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ--A 377
+ +S IP+E + V + ++CG+ H+ DG ++ +G G+
Sbjct: 175 EDKSNVCIPHE----------VTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGL 224
Query: 378 ANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADAC 415
NE P V V ++A GGGH+ VL +
Sbjct: 225 PNELLMNHRSPQRVLGIPERVIQVACGGGHTVVLTEKV 262
Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 89/195 (45%), Gaps = 38/195 (19%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+++WG N GQ G + + + IP ++ G W I+CG+ H+A V DG
Sbjct: 161 LFMWGDNSEGQIGLEDK-SNVCIPHEV-------TVGKPISW--ISCGYYHSAFVTMDGE 210
Query: 83 LFTWGANEFGQLGDGTEEGRKH--PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
L+T+G E G+LG E H P++V + E V ++CG T + E
Sbjct: 211 LYTFGEPENGKLGLPNELLMNHRSPQRVLGI-PERVIQVACGGGHTVVLTE--------- 260
Query: 141 TSRLWVWGQNQGSNFPRLFWGAF-----TPNTI-------ICQVSCGSVHVVALSECGLL 188
++ +G Q F +L G F P I IC +SCG H ++E GLL
Sbjct: 261 -KVVYAFGLGQ---FGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLL 316
Query: 189 QAWGYNEYGQLGRGI 203
+G +G+LG G+
Sbjct: 317 YTFGDGRHGKLGLGM 331
>sp|Q9VR91|HERC2_DROME Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster
GN=HERC2 PE=1 SV=3
Length = 4912
Score = 122 bits (307), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 163/352 (46%), Gaps = 55/352 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y G +G+ G G + +P QLP + + + G +H A+ DG
Sbjct: 3040 VYACGEGTNGRLGL-GVTHNVPLPHQLP-----VLRQYVVKKVAVHSGGKHALALTLDGK 3093
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F+WG E G+LG G P V+ L+++ ++ ++CG+ +AAI+ S
Sbjct: 3094 VFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAIS---------SQG 3144
Query: 143 RLWVWGQNQ------GSNFPRLFWGAFT--PNTIICQVSCGS--VHVVALSECGLLQAWG 192
L+ WG + G N +L T + QV+CGS +AL+E G + +WG
Sbjct: 3145 ELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWG 3204
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTW 252
++G+LGRG EG P I+ + + Q+ CG S A++ GEV+TW
Sbjct: 3205 DGDFGKLGRG-GSEGSDTPHEIERLSGI--------GVVQIECGAQFSLALTRAGEVWTW 3255
Query: 253 GLGSVGQLGHCSLQSGDKELL-PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
G G +LGH GD+ + P+ + L G + VA G +H A+T G +YAWG +
Sbjct: 3256 GKGDYYRLGH----GGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDND 3311
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVY 360
GQ G G +T+ P LV+ V VACG SH++ +
Sbjct: 3312 HGQQGSG-------------NTFVNKKPALVIGLDAVFVNRVACGSSHSIAW 3350
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 136/286 (47%), Gaps = 35/286 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R PK L L G DIACG H+AA+ + G
Sbjct: 4157 VYAWGEGEDGKLGHGNRMSYDR-PK-LVEHLNGMSVA------DIACGSAHSAAITASGH 4208
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+ TWG +G+LG G E + P+ V+ L I+CG+ + +++
Sbjct: 4209 VLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDN------ 4262
Query: 143 RLWVWGQNQ-------GSNFPRLFWGAFTPNTI-ICQVSCGSVHVVALSECGLLQAWGYN 194
+W WG GS+ +L + + + + +V CGS VAL++ G + WG
Sbjct: 4263 -VWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKG 4321
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
++ +LG G + + ++ P+ + A + +KI ++ G H A S++GEVYTWG
Sbjct: 4322 DFHRLGHG-SVDHVRRPKKVA--------ALQGKKIISIATGSLHCVACSDSGEVYTWGD 4372
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
GQLG ++ + + PR V AL G I V CG H+ AL++
Sbjct: 4373 NDEGQLGDGTVTAIQR---PRLVAALQGKHIVKVTCGSAHTLALST 4415
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 164/410 (40%), Gaps = 92/410 (22%)
Query: 11 ARPVDNIPAKSAIYVWGYNHSGQTG-RKGRERQLRIPKQLPPELFGCPAGANSRWLDIAC 69
A P ++P + VWG N Q G KG + ++ Q L R + IA
Sbjct: 2978 AAPEQDLPC--TVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRL---------RPIHIAG 3026
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAI 129
G + V+ DG ++ G G+LG G P ++ L+ VK ++
Sbjct: 3027 GSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVA--------- 3077
Query: 130 AEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQ 189
V G H +AL+ G +
Sbjct: 3078 ------------------------------------------VHSGGKHALALTLDGKVF 3095
Query: 190 AWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEV 249
+WG E G+LG G L PR++ EA +KI V+CG HSAA+S GE+
Sbjct: 3096 SWGEGEDGKLGHG-NRTTLDKPRLV--------EALRAKKIRDVACGSSHSAAISSQGEL 3146
Query: 250 YTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALY 305
YTWGLG G+LGH GD +L P+ V AL G + VACG + ALT GA++
Sbjct: 3147 YTWGLGEYGRLGH-----GDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVF 3201
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
+WG G+LG G S + P+E + + GV + CG +L R G
Sbjct: 3202 SWGDGDFGKLGRGGSEGSDT--PHEIER--------LSGIGVVQIECGAQFSLALTRAGE 3251
Query: 366 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLADA 414
+ WG Y + + + P P+ G V +A G H + DA
Sbjct: 3252 VWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDA 3301
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 139/320 (43%), Gaps = 45/320 (14%)
Query: 51 PELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQ 110
P L G + + + G +H A+ ++G ++ WG E G+LG G P+ V+
Sbjct: 4125 PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEH 4184
Query: 111 LQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFW 160
L V I+CG+ +AAI ++ + WG+ + P+L
Sbjct: 4185 LNGMSVADIACGSAHSAAIT---------ASGHVLTWGKGRYGRLGHGDSEDQLRPKLVE 4235
Query: 161 GAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF 220
I G + +++ + +WG +YG+LGRG +G + P I+ A
Sbjct: 4236 ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG-GSDGCKLPYKIESLAGL 4294
Query: 221 LDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL 280
+ +V CG S A++++G VYTWG G +LGH S+ D P++V AL
Sbjct: 4295 --------GVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSV---DHVRRPKKVAAL 4343
Query: 281 DGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPI 340
G I +A G +H A + G +Y WG + GQLG G + T + +
Sbjct: 4344 QGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDG------------TVTAIQRPRL 4391
Query: 341 LVVPNGVQL--VACGHSHTL 358
+ G + V CG +HTL
Sbjct: 4392 VAALQGKHIVKVTCGSAHTL 4411
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 173/410 (42%), Gaps = 62/410 (15%)
Query: 21 SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
S IY WG+NH GQ G G E RI P C A + R + +A G + AV D
Sbjct: 4049 STIYGWGHNHRGQLG--GLEGS-RIKTPTP-----CEALSLLRPVQLAGGEQSLFAVTPD 4100
Query: 81 GTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDG 137
G LF G G+LG G + P + LQ FVK ++ G HC A E
Sbjct: 4101 GKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTE------ 4154
Query: 138 TISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGL 187
++ WG+ + P+L + ++CGS H A++ G
Sbjct: 4155 ----GEVYAWGEGEDGKLGHGNRMSYDRPKLV--EHLNGMSVADIACGSAHSAAITASGH 4208
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSE 245
+ WG YG+LG G + + L+ P++++ + + ++C G+ + +++
Sbjct: 4209 VLTWGKGRYGRLGHGDSEDQLR-PKLVEALLGY--------RAIDIACGSGDAQTLCITD 4259
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+ V++WG G G+LG D LP ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4260 DDNVWSWGDGDYGKLGR---GGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVY 4316
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSHTLVYMRD 363
WG +LG G S + R + G ++ +A G H +
Sbjct: 4317 TWGKGDFHRLGHG------------SVDHVRRPKKVAALQGKKIISIATGSLHCVACSDS 4364
Query: 364 GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLA 412
G ++ WG N GQ + T P V G+ + K+ G H+ L+
Sbjct: 4365 GEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4414
Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 171/412 (41%), Gaps = 53/412 (12%)
Query: 60 ANSRWLDIA--CGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVK 117
A+ ++ IA C H A+ S+ ++WG E +LG G R P K+ L+ V+
Sbjct: 612 AHDVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQ 671
Query: 118 SISCGAHCTAAIAEPRENDGTISTSRLWVWGQ----------NQGSNFPRLFWGAFTPNT 167
S+ CG +AAI L WG+ + + P L
Sbjct: 672 SVYCGCSYSAAIT---------CGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMV 722
Query: 168 IICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL 227
+ + G H +AL+ GL+ AWG +YG+LG G C G P +++ L
Sbjct: 723 VDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNG-NCNGSLQPILVES----------L 771
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKEL-LPRRVVALDGIFIK 286
++ +V G S A+S G++YTWG + LGH ++ + +PR V +L I
Sbjct: 772 PRVQRVFAGSQFSVALSSEGQLYTWGKATC--LGHQLVERSVQGCSVPRLVSSLQHKRIV 829
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV-VPN 345
DVA H AL+S G ++ WG + + Q + P + S S+ R PILV +P
Sbjct: 830 DVAVSVAHCLALSSSGEVFGWGRNDSQQ--ICPASVS-------SEPLLRT-PILVSLPT 879
Query: 346 -GVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAG 404
+AC + +LV+ + G + + T+ + C + +
Sbjct: 880 FPASGIACTSAQSLVWTQSSH-QGVPRRAPFVVDLGEPTFRLLDQLLGMCSSQDNR-QTP 937
Query: 405 GGHSAVLADACSLKELCEFRLAESVTLSNASEIEDVASRTGSEALARLCERL 456
S +A AC L FRL ++N E V +GS L L R+
Sbjct: 938 NQESECIAVAC----LNLFRLQLLALIANGVEPRQVGLASGSRLLCSLKTRI 985
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 80/191 (41%), Gaps = 34/191 (17%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
+I QV+C E +S+ G++YTW L + E LP VA D +FI
Sbjct: 573 QIKQVACCETQMLILSQEGKLYTWRLAK-----------PEAEPLPMEEVAHD-VFISIA 620
Query: 289 A-CGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP--- 344
C G H A+ S Y+WG + +LG G DT+ R +P +
Sbjct: 621 GHCEGRHFLAIDSNHNAYSWGTGEDHRLGHG-------------DTHARAVPTKIAALEQ 667
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV----DWCVGEVRK 400
+ VQ V CG S++ G + WG +Y + + S P+ V D V +V
Sbjct: 668 HCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDV-A 726
Query: 401 LAAGGGHSAVL 411
L +G HS L
Sbjct: 727 LGSGDAHSLAL 737
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 34/70 (48%)
Query: 63 RWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCG 122
R + +A G H AV G ++ WG N+ GQ G G K P V L + FV ++CG
Sbjct: 3284 RVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACG 3343
Query: 123 AHCTAAIAEP 132
+ + A P
Sbjct: 3344 SSHSIAWGLP 3353
>sp|Q9N1T2|RPGR_CANFA X-linked retinitis pigmentosa GTPase regulator OS=Canis familiaris
GN=RPGR PE=2 SV=1
Length = 1003
Score = 122 bits (306), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 109/351 (31%), Positives = 170/351 (48%), Gaps = 30/351 (8%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++CG EHTA V + L+ +G+N +GQLG G++ P VK L+ E VK +CG + T
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99
Query: 127 AAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSE 184
E + G + +L + + S F + + FT I Q+S GS AL+E
Sbjct: 100 LVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISF--FTSQRKIKQLSAGSNTSAALTE 157
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVS 244
G L WG N GQ+G +V G + I+ +SCG YHSA V+
Sbjct: 158 DGELFMWGDNSEGQIGLENVTNVCVPQQVTVG-----------KPISWISCGYYHSAFVT 206
Query: 245 ENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
G++YT+G G+LG Q +P+ V + G ++ VACGG H+ LT K A+
Sbjct: 207 TEGQLYTFGEPECGKLG-LPNQLLVNHRMPQPVPGIPGKVVQ-VACGGGHTVVLTEK-AV 263
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDG 364
Y +G Q GQLGLG T F ++ + ++ + +ACG +HT + G
Sbjct: 264 YTFGLGQFGQLGLG--TFLFETSVPKAIEHIKD-------QKISFIACGENHTALITDMG 314
Query: 365 RIHGWGYNSYGQ--AANEKSTYAWYPSP-VDWCVGEVRKLAAGGGHSAVLA 412
++ +G +G+ E ST + P+ ++ V+ ++ GG H+ V A
Sbjct: 315 LMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHTLVFA 365
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 124/286 (43%), Gaps = 51/286 (17%)
Query: 144 LWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
++ +G+ Q N P FW N + +SCG H ++ L +G N +GQLG G
Sbjct: 14 VFTFGKTQFAENIPSKFWFR---NDVPTFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLG 70
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
+ + P +K A + EK+ +CG H+ +E G+VY G + GQLG
Sbjct: 71 -SKSTVSKPTCVK--------ALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLG- 120
Query: 263 CSLQSGDKELLPRRVVALDGIF-----IKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GD E R L F IK ++ G S ALT G L+ WG + GQ+GL
Sbjct: 121 ----LGDTE--ERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGL 174
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQL------VACGHSHTLVYMRDGRIHGWGY 371
N+ + VP V + ++CG+ H+ +G+++ +G
Sbjct: 175 ------------------ENVTNVCVPQQVTVGKPISWISCGYYHSAFVTTEGQLYTFGE 216
Query: 372 NSYGQ--AANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLADAC 415
G+ N+ P PV G+V ++A GGGH+ VL +
Sbjct: 217 PECGKLGLPNQLLVNHRMPQPVPGIPGKVVQVACGGGHTVVLTEKA 262
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 103/233 (44%), Gaps = 47/233 (20%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+++WG N GQ G + + +P+Q+ G W I+CG+ H+A V ++G
Sbjct: 161 LFMWGDNSEGQIGLENV-TNVCVPQQV-------TVGKPISW--ISCGYYHSAFVTTEGQ 210
Query: 83 LFTWGANEFGQLGDGTEEGRKH--PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
L+T+G E G+LG + H P+ V + + V+ ++CG T + E
Sbjct: 211 LYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKVVQ-VACGGGHTVVLTE--------- 260
Query: 141 TSRLWVWGQNQGSNFPRLFWGAF-----TPNTI-------ICQVSCGSVHVVALSECGLL 188
++ +G Q F +L G F P I I ++CG H +++ GL+
Sbjct: 261 -KAVYTFGLGQ---FGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLM 316
Query: 189 QAWGYNEYGQLGRGITCEGLQG-PRVIKGYAKFLDEAPELEKITQVSCGEYHS 240
+G +G+LG G+ Q P + + +F+ + VSCG H+
Sbjct: 317 YTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFI--------VQLVSCGGCHT 361
>sp|F2Z461|HERC6_MOUSE E3 ISG15--protein ligase Herc6 OS=Mus musculus GN=Herc6 PE=2 SV=1
Length = 1003
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 118/237 (49%), Gaps = 17/237 (7%)
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
VSCG H VA+ G + AWG GQLG G E P IK A KI
Sbjct: 79 VSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGI--------KII 130
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
QVSCG YHS A+SE+G V++WG S GQLG ++ + +P++V +L+GI + VA G
Sbjct: 131 QVSCGHYHSLALSEDGHVFSWGRNSEGQLGLG--KNSRSQAIPQKVKSLEGIPLAQVAAG 188
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVA 351
G HS AL+ G + WG +++GQL L + S +N+ ++ + +
Sbjct: 189 GTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYI-------S 241
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHS 408
CG+ HT V +G++ +G NS GQ + P ++ G V ++ H+
Sbjct: 242 CGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQIECASYHT 298
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 125/269 (46%), Gaps = 32/269 (11%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
L A G H+ + S+ +++ G N +GQLG ++ + PE ++ L V +SCG
Sbjct: 25 LQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKE 84
Query: 125 CTAAIAEPRENDGTISTSRLWVWG-----QNQGSNFPRLFWGAFTPNTI-------ICQV 172
+ A+ +++ WG Q F + +F P I I QV
Sbjct: 85 HSVAVCH---------KGKVFAWGAGSEGQLGIGEFKEI---SFMPTKIKALAGIKIIQV 132
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
SCG H +ALSE G + +WG N GQLG G P+ +K L+ P + Q
Sbjct: 133 SCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKS----LEGIP----LAQ 184
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
V+ G HS A+S G + WG GQL + ++ P + AL + + ++CG
Sbjct: 185 VAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGY 244
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQT 321
H+ LT +G ++ +GG+ +GQL P++
Sbjct: 245 EHTAVLTEEGQVFTFGGNSSGQLQPSPRS 273
Score = 99.8 bits (247), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 124/270 (45%), Gaps = 33/270 (12%)
Query: 152 GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
GS PR A T + Q + G H + L + + G N +GQLG+ + + P
Sbjct: 8 GSRKPRRL-KAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQR-RDQSTERP 65
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
I+ + VSCG+ HS AV G+V+ WG GS GQLG + +
Sbjct: 66 EPIQALNDL--------HVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFK--EIS 115
Query: 272 LLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNES 331
+P ++ AL GI I V+CG HS AL+ G +++WG + GQLGLG +RS IP +
Sbjct: 116 FMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRS-QAIPQKV 174
Query: 332 DTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA---NEKSTYAWYP 388
+ IP+ VA G +H+ G GWG N GQ A N+ + P
Sbjct: 175 KS-LEGIPL-------AQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKP 226
Query: 389 SPVDWCVGEVRKLAA-----GGGHSAVLAD 413
+G ++ L+ G H+AVL +
Sbjct: 227 H----SIGALKNLSVIYISCGYEHTAVLTE 252
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 115/249 (46%), Gaps = 39/249 (15%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG GQ G G +++ +P ++ A A + + ++CGH H+ A++
Sbjct: 92 KGKVFAWGAGSEGQLG-IGEFKEISF---MPTKI---KALAGIKIIQVSCGHYHSLALSE 144
Query: 80 DGTLFTWGANEFGQLGDG-TEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGT 138
DG +F+WG N GQLG G + P+KVK L+ + ++ G + A++ + G
Sbjct: 145 DGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFG- 203
Query: 139 ISTSRLWVWGQNQGSNFP----RLFWGAFTPNTI-------ICQVSCGSVHVVALSECGL 187
WG N+ ++ + P++I + +SCG H L+E G
Sbjct: 204 --------WGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQ 255
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSEN 246
+ +G N GQL G +GP++I+G +++Q+ C YH+ A V
Sbjct: 256 VFTFGGNSSGQLQPS-PRSGQRGPQLIEGIGG---------RVSQIECASYHTIAYVYTT 305
Query: 247 GEVYTWGLG 255
G+V + G G
Sbjct: 306 GQVVSLGRG 314
>sp|Q92834|RPGR_HUMAN X-linked retinitis pigmentosa GTPase regulator OS=Homo sapiens
GN=RPGR PE=1 SV=2
Length = 1020
Score = 119 bits (299), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 161/354 (45%), Gaps = 49/354 (13%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIP---KQLPPELFGCPAGANSRWLDIACGHEH 73
+ + +Y++G N+ GQ G G + + P K L PE ACG H
Sbjct: 50 VTGNNKLYMFGSNNWGQLGL-GSKSAISKPTCVKALKPEKVKL----------AACGRNH 98
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF-VKSISCGAHCTAAIAEP 132
T G ++ G N GQLG G E R + SE +K +S G++ +AA+ E
Sbjct: 99 TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTE- 157
Query: 133 RENDGTISTSRLWVWGQN-QGSNFPRLFWGAFTPNTI-----ICQVSCGSVHVVALSECG 186
DG RL++WG N +G + P + + +SCG H ++ G
Sbjct: 158 ---DG-----RLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDG 209
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
L +G E G+LG + + L R + + E PE K+ QV+CG H+ ++EN
Sbjct: 210 ELYVFGEPENGKLG--LPNQLLGNHRT----PQLVSEIPE--KVIQVACGGEHTVVLTEN 261
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
VYT+GLG GQLG + E P+ + + I ++CG H+ +T G +Y
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSE--PKVIENIRDQTISYISCGENHTALITDIGLMYT 318
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+G + G+LGLG + + IP + R I V+LVACG H +V+
Sbjct: 319 FGDGRHGKLGLGLENFTNHFIPTLCSNFLRFI--------VKLVACGGCHMVVF 364
Score = 116 bits (290), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 178/393 (45%), Gaps = 51/393 (12%)
Query: 43 LRIPKQLPPE-----LFGCPAGA----------NSRWLDIACGHEHTAAVASDGTLFTWG 87
+R P++L P+ FG A N + ++CG EH+A V + L+ +G
Sbjct: 1 MREPEELMPDSGAVFTFGKSKFAENNPGKFWFKNDVPVHLSCGDEHSAVVTGNNKLYMFG 60
Query: 88 ANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE--NDGTISTSRLW 145
+N +GQLG G++ P VK L+ E VK +CG + T E G + +L
Sbjct: 61 SNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLG 120
Query: 146 VWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITC 205
+ + + F + + FT I Q+S GS AL+E G L WG N GQ+G
Sbjct: 121 LGDTEERNTFHVISF--FTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVS 178
Query: 206 EGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSL 265
+V G + ++ +SCG YHSA V+ +GE+Y +G G+LG +
Sbjct: 179 NVCVPQQVTIG-----------KPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQ 227
Query: 266 QSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP---QTR 322
G+ P+ V + I+ VACGG H+ LT + A+Y +G Q GQLGLG +T
Sbjct: 228 LLGNHR-TPQLVSEIPEKVIQ-VACGGEHTVVLT-ENAVYTFGLGQFGQLGLGTFLFETS 284
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ--AANE 380
+I N D + ++CG +HT + G ++ +G +G+ E
Sbjct: 285 EPKVIENIRD------------QTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLE 332
Query: 381 KSTYAWYPSPVDWCVGEVRKLAA-GGGHSAVLA 412
T + P+ + + KL A GG H V A
Sbjct: 333 NFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFA 365
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 121/284 (42%), Gaps = 51/284 (17%)
Query: 144 LWVWGQNQ-GSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
++ +G+++ N P FW N + +SCG H ++ L +G N +GQLG G
Sbjct: 14 VFTFGKSKFAENNPGKFWFK---NDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLG 70
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
+ + P +K A + EK+ +CG H+ +E G VY G + GQLG
Sbjct: 71 -SKSAISKPTCVK--------ALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGL 121
Query: 263 CSLQSGDKELLPRRVVALDGIF-----IKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GD E R + F IK ++ G S ALT G L+ WG + GQ+GL
Sbjct: 122 -----GDTE--ERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGL 174
Query: 318 GPQTRSFSLIPNESDTYFRNIPILVVPNGVQL------VACGHSHTLVYMRDGRIHGWGY 371
+N+ + VP V + ++CG+ H+ DG ++ +G
Sbjct: 175 ------------------KNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVFGE 216
Query: 372 NSYGQAANEKSTYAWYPSP--VDWCVGEVRKLAAGGGHSAVLAD 413
G+ + +P V +V ++A GG H+ VL +
Sbjct: 217 PENGKLGLPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTE 260
>sp|Q99LJ7|RCBT2_MOUSE RCC1 and BTB domain-containing protein 2 OS=Mus musculus GN=Rcbtb2
PE=2 SV=1
Length = 551
Score = 119 bits (299), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 116/233 (49%), Gaps = 24/233 (10%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H+V + G + WG+N Y QLG G T GL + + +++ +V+CG
Sbjct: 110 HIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN--------KQVIEVACGS 161
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHSC 296
YHS ++ +GEV+ WG + GQ+G S + + +PRRV L + ++ACG + S
Sbjct: 162 YHSLVLTSDGEVFAWGYNNSGQVGSGSTAN---QPIPRRVTGCLQNKVVMNIACGQMCSM 218
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G +Y WG + GQLGLG + + R VQ VACG++H
Sbjct: 219 AVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR----------VQRVACGYAH 268
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
TLV +G+I+ WG NSYGQ + YP+PV V + R + HSA
Sbjct: 269 TLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPV--VVEKDRIIEIAACHSA 319
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 135/298 (45%), Gaps = 39/298 (13%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F G N G LG G + P ++ L + + S+S G+ +A DG + T
Sbjct: 67 IFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLAT---TDGEVFT- 122
Query: 143 RLWVWGQNQGSNFPR---------LFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
WG N S N + +V+CGS H + L+ G + AWGY
Sbjct: 123 ----WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
N GQ+G G T PR + G + + + ++CG+ S AV + GEVY WG
Sbjct: 179 NNSGQVGSGSTANQ-PIPRRVTG-------CLQNKVVMNIACGQMCSMAVVDTGEVYVWG 230
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
GQLG L S + P RV AL GI ++ VACG H+ LT +G +YAWG + G
Sbjct: 231 YNGNGQLG---LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 287
Query: 314 QLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRIHGWG 370
QLG G N+S+ + ++ +++ AC +HT + G ++ WG
Sbjct: 288 QLGTG----------NKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 115/243 (47%), Gaps = 39/243 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G +P + L +N + +++ACG H+ + SDG
Sbjct: 120 VFTWGHNAYSQLG-NGTTNHGLVPCHISTNL------SNKQVIEVACGSYHSLVLTSDGE 172
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P +V LQ++ V +I+CG C+ A+ + T
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAV---------VDT 223
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N N P A + +V+CG H + L++ G + AWG
Sbjct: 224 GEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGA 283
Query: 194 NEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G + + P V+ E ++I ++ +C H SAA ++ G VY
Sbjct: 284 NSYGQLGTGNKSNQSYPTPVVV-----------EKDRIIEIAACHSAHTSAAKTQGGHVY 332
Query: 251 TWG 253
WG
Sbjct: 333 MWG 335
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 18/133 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G Q P A R +ACG+ HT + +G
Sbjct: 226 VYVWGYNGNGQLGLGSSGNQ--------PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 277
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
++ WGAN +GQLG G + + +P V + ++ +C AH +AA +
Sbjct: 278 IYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQG--------- 328
Query: 142 SRLWVWGQNQGSN 154
+++WGQ +G +
Sbjct: 329 GHVYMWGQCRGQS 341
>sp|Q6NXM2|RCBT1_MOUSE RCC1 and BTB domain-containing protein 1 OS=Mus musculus GN=Rcbtb1
PE=2 SV=1
Length = 531
Score = 119 bits (298), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 152/367 (41%), Gaps = 83/367 (22%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G +A + ++V+G N+S G G + +PK+L G + L
Sbjct: 26 VFGTSANEAIYVTDNDEVFVFGLNYSNCLG-TGDNQSTLVPKKLEA-----LCGKKIKSL 79
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHC 125
G H DG ++ WG N + QLG+GT P +V C
Sbjct: 80 SYGSG-PHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQV----------------C 122
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
T + + + +V+CGS H +AL+
Sbjct: 123 TNLLIKQ------------------------------------VIEVACGSHHSMALAAD 146
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G L AWGYN GQ+G G T PR + +++ ++CG+ S AV +
Sbjct: 147 GELFAWGYNNCGQVGSGSTANQ-PTPRKVT-------NCLHTKRVVNIACGQTSSMAVLD 198
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+GEVY WG GQLG L + +L P RV AL G+ + + CG H+ ALT +G LY
Sbjct: 199 SGEVYGWGYNGNGQLG---LGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLY 255
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV-QLVACGHSHT-LVYMRD 363
AWG + GQLG G + S P + I+V V ++ AC +HT +
Sbjct: 256 AWGANTYGQLGTGSKNNLLS--PTQ---------IMVEKERVIEIAACHSTHTSAAKTQG 304
Query: 364 GRIHGWG 370
G ++ WG
Sbjct: 305 GHVYMWG 311
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 28/203 (13%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
HV+ +E G++ AWG+N Y QLG G T +G+ +V ++++ +V+CG
Sbjct: 86 HVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLL--------IKQVIEVACGS 137
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHSC 296
+HS A++ +GE++ WG + GQ+G S + + PR+V L + ++ACG S
Sbjct: 138 HHSMALAADGELFAWGYNNCGQVGSGSTAN---QPTPRKVTNCLHTKRVVNIACGQTSSM 194
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLVACG 353
A+ G +Y WG + GQLGLG + P+ V V + CG
Sbjct: 195 AVLDSGEVYGWGYNGNGQLGLGNNGNQLT-------------PVRVAALHGMCVNQIVCG 241
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQ 376
++HTL +G ++ WG N+YGQ
Sbjct: 242 YAHTLALTDEGLLYAWGANTYGQ 264
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 81/173 (46%), Gaps = 17/173 (9%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHSCALT 299
V++N EV+ +GL LG +GD + L+P+++ AL G IK ++ G G H T
Sbjct: 37 VTDNDEVFVFGLNYSNCLG-----TGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTT 91
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
G +YAWG + QLG G + + + ++ + V VACG H++
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQ---------VIEVACGSHHSMA 142
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
DG + WGYN+ GQ + + P V C+ R + G ++ +A
Sbjct: 143 LAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMA 195
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 18/150 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WGYN +GQ G QL P ++ C I CG+ HT A+ +G
Sbjct: 202 VYGWGYNGNGQLGLGNNGNQLT-PVRVAALHGMCVN-------QIVCGYAHTLALTDEGL 253
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+ WGAN +GQLG G++ P ++ + ++ +C + T+A
Sbjct: 254 LYAWGANTYGQLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSA--------AKTQGG 305
Query: 143 RLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L T + C
Sbjct: 306 HVYMWGQCRGQSVILPHLTHFCCTDDVFAC 335
>sp|Q6P798|RCBT2_RAT RCC1 and BTB domain-containing protein 2 OS=Rattus norvegicus
GN=Rcbtb2 PE=2 SV=1
Length = 551
Score = 119 bits (297), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 115/233 (49%), Gaps = 24/233 (10%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H+V + G + WG+N Y QLG G T GL + + +++ +V+CG
Sbjct: 110 HIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN--------KQVIEVACGS 161
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA-LDGIFIKDVACGGVHSC 296
YHS ++ +GEV+ WG + GQ+G S + + +PRRV L + +ACG + S
Sbjct: 162 YHSLVLTSDGEVFAWGYNNSGQVGSGSTAN---QPIPRRVTGCLQNKVVMSIACGQMCSM 218
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G +Y WG + GQLGLG + + R VQ VACG++H
Sbjct: 219 AVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR----------VQRVACGYAH 268
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
TLV +G+I+ WG NSYGQ + YP+PV V + R + HSA
Sbjct: 269 TLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPV--VVEKDRIIEIAACHSA 319
Score = 115 bits (289), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 135/298 (45%), Gaps = 39/298 (13%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
+F G N G LG G + P ++ L + + S+S G+ +A DG + T
Sbjct: 67 IFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLAT---TDGEVFT- 122
Query: 143 RLWVWGQNQGSNFPR---------LFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
WG N S N + +V+CGS H + L+ G + AWGY
Sbjct: 123 ----WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
N GQ+G G T PR + G + + + ++CG+ S AV + GEVY WG
Sbjct: 179 NNSGQVGSGSTANQ-PIPRRVTG-------CLQNKVVMSIACGQMCSMAVVDTGEVYVWG 230
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAG 313
GQLG L S + P RV AL GI ++ VACG H+ LT +G +YAWG + G
Sbjct: 231 YNGNGQLG---LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 287
Query: 314 QLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRIHGWG 370
QLG G N+S+ + ++ +++ AC +HT + G ++ WG
Sbjct: 288 QLGTG----------NKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKSQGGHVYMWG 335
Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 115/243 (47%), Gaps = 39/243 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G +P + L +N + +++ACG H+ + SDG
Sbjct: 120 VFTWGHNAYSQLG-NGTTNHGLVPCHISTNL------SNKQVIEVACGSYHSLVLTSDGE 172
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P +V LQ++ V SI+CG C+ A+ + T
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAV---------VDT 223
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N N P A + +V+CG H + L++ G + AWG
Sbjct: 224 GEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGA 283
Query: 194 NEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G + + P V+ E ++I ++ +C H SAA S+ G VY
Sbjct: 284 NSYGQLGTGNKSNQSYPTPVVV-----------EKDRIIEIAACHSAHTSAAKSQGGHVY 332
Query: 251 TWG 253
WG
Sbjct: 333 MWG 335
Score = 95.9 bits (237), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 138/333 (41%), Gaps = 46/333 (13%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G V I+V G N SG G I + P G L
Sbjct: 50 VFGTAGNEVLYTTVNDEIFVLGTNCSGCLGVGD------IQSTIEPRRLDSLTGKKIASL 103
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK-QLQSEFVKSISCGAH 124
G H +DG +FTWG N + QLG+GT P + L ++ V ++CG++
Sbjct: 104 SYGSG-PHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSY 162
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSN----------FPRLFWGAFTPNTIICQVSC 174
+ + +DG + + WG N PR G N ++ ++C
Sbjct: 163 HSLVLT----SDGEV-----FAWGYNNSGQVGSGSTANQPIPRRVTGCLQ-NKVVMSIAC 212
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G + +A+ + G + WGYN GQLG G + RV A + ++ +V+
Sbjct: 213 GQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRV---------AALQGIRVQRVA 263
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDK--ELLPRRVVALDGIFIKDVACGG 292
CG H+ +++ G++Y WG S GQLG +G+K + P VV I+ AC
Sbjct: 264 CGYAHTLVLTDEGQIYAWGANSYGQLG-----TGNKSNQSYPTPVVVEKDRIIEIAACHS 318
Query: 293 VHSCALTSKGA-LYAWGGSQAGQLGLGPQTRSF 324
H+ A S+G +Y WG + GQ + P F
Sbjct: 319 AHTSAAKSQGGHVYMWGQCR-GQSVILPHLTHF 350
Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 20/151 (13%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G Q P A R +ACG+ HT + +G
Sbjct: 226 VYVWGYNGNGQLGLGSSGNQ--------PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 277
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC-GAHCTAAIAEPRENDGTIST 141
++ WGAN +GQLG G + + +P V + ++ +C AH +AA ++
Sbjct: 278 IYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKSQ---------G 328
Query: 142 SRLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L T + C
Sbjct: 329 GHVYMWGQCRGQSVILPHLTHFCCTDDVFAC 359
>sp|Q4U2R1|HERC2_MOUSE E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=3
Length = 4836
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 179/412 (43%), Gaps = 69/412 (16%)
Query: 20 KSAIYVWGYNHSGQTG-RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
++ ++VWG N Q G KG + ++ P + N + +A G + AV
Sbjct: 2959 RTKVFVWGLNDKDQLGGLKGSKIKV-------PSFSETLSALNV--VQVAGGSKSLFAVT 3009
Query: 79 SDGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRE 134
+G +++ G G+LG G G P ++ L S VK ++ G H TA
Sbjct: 3010 VEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV---- 3065
Query: 135 NDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSE 184
DG +++ WG+ PRL T I ++CGS H AL+
Sbjct: 3066 -DG-----KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTS 3117
Query: 185 CGLLQAWGYNEYGQLGRGITCEGLQGP--RVIKGYAKFLDEAPELEKITQVSCG--EYHS 240
G L WG EYG+LG G L+ +V+ G+ ++ QV+CG + +
Sbjct: 3118 SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-----------RVIQVACGSRDAQT 3166
Query: 241 AAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
A+++ G V++WG G G+LG + + +P+ + L+G + + CG S ALT
Sbjct: 3167 LALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTK 3223
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTL 358
G ++ WG +LG G SD + R ++ G ++V A G H L
Sbjct: 3224 SGVVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRGKKIVHVAVGALHCL 3271
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
G+++ WG N +GQ N +T P+ V G+ + ++A G HS
Sbjct: 3272 AVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3323
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3069 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 3120
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 3121 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 3173
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 3174 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3230
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV+++G+VY
Sbjct: 3231 GKGDYFRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDSGQVYA 3281
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3282 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3327
Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 3008 VTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQI-----TALSSYVVKKVAVHSGGRHATA 3062
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+
Sbjct: 3063 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------ 3116
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 3117 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3170
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 3171 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 3221
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH S K P+ V L G I VA G +H A+T G
Sbjct: 3222 TKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDSGQ 3278
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 3279 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3325
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 144/327 (44%), Gaps = 50/327 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +D+A G H+A V + G
Sbjct: 4062 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRGIEV--VDVAAGGAHSACVTAAGD 4113
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG E + P+ V+ LQ V I+CG+ + +D T+
Sbjct: 4114 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLC--LTDDDTV--- 4168
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 4169 --WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4226
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 4227 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4277
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G + VACG H+ AW S+
Sbjct: 4278 NDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAWSTSKPAS 4325
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPIL 341
G P + +P E + + + IPI+
Sbjct: 4326 AGKLP-----AQVPMEYN-HLQEIPII 4346
Score = 106 bits (264), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 174/411 (42%), Gaps = 76/411 (18%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P C A A R + + G + AV +DG
Sbjct: 3956 IYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALATLRPVQLIGGEQTLFAVTADG 4006
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 4007 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE------- 4059
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG+ + PR+ + V+ G H ++ G L
Sbjct: 4060 ---GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLR--GIEVVDVAAGGAHSACVTAAGDL 4114
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSEN 246
WG YG+LG + + L+ P+++ EA + ++ ++C G+ + ++++
Sbjct: 4115 YTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVIDIACGSGDAQTLCLTDD 4165
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4166 DTVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 4222
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTL 358
WG +LG G SD + R P VQ +A G H +
Sbjct: 4223 WGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCV 4264
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
DG ++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4265 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4315
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 128/276 (46%), Gaps = 25/276 (9%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N P+L G + N + H +AL+ G + +WG + G+LG G
Sbjct: 472 RVYTQAYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG 531
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P+VI ++ + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 532 DTVP-LEEPKVISAFSG----KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 586
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + E +P V L G+ + DVACG + A+T G +++WG G+LG G
Sbjct: 587 ---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 643
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D V V CG ++ +DG+++ WG +
Sbjct: 644 DGCKTPKLIEKLQDL------------DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 691
Query: 379 NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ + YP ++ G +V +AAG H L +
Sbjct: 692 HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 124/253 (49%), Gaps = 30/253 (11%)
Query: 134 ENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N +GS + + QV+ GS + A++
Sbjct: 2953 ESTATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + + G G+LG G++ + PR I + ++ K V G H+ A++
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYV------VKKVAVHSGGRHATALTV 3065
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS ALTS G LY
Sbjct: 3066 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELY 3122
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRD 363
WG + G+LG G T L P + + +L+ +Q VACG + TL +
Sbjct: 3123 TWGLGEYGRLGHGDNTT--QLKP-------KMVKVLLGHRVIQ-VACGSRDAQTLALTDE 3172
Query: 364 GRIHGWGYNSYGQ 376
G + WG +G+
Sbjct: 3173 GLVFSWGDGDFGK 3185
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 134/310 (43%), Gaps = 53/310 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHC 125
+ G +H A++S+G +++WG E G+LG G P ++ L+ E V + GAH
Sbjct: 4046 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4105
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCG 175
A L+ WG+ + P+L A + +I ++CG
Sbjct: 4106 ACVTA----------AGDLYTWGKGRYGRLGHSDSEDQLKPKLV-EALQGHRVI-DIACG 4153
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + L++ + +WG +YG+LGRG +G + P I + +V
Sbjct: 4154 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVKV 4204
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G VYTWG G +LGH S D PR+V L G + +A G +
Sbjct: 4205 ECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSL 4261
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLV 350
H T G +Y WG + GQLG G T P LV V V
Sbjct: 4262 HCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRV 4308
Query: 351 ACGHSHTLVY 360
ACG +HTL +
Sbjct: 4309 ACGSAHTLAW 4318
Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 45/285 (15%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+L A N + H A+A+ G +++WG + G+LG G + P+ +
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVI 542
Query: 109 KQLQ----SEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT 164
+ V I+CG+ +AAI E L+ WG+ N+ RL G+
Sbjct: 543 SAFSGKQAGKHVVHIACGSTYSAAITAEGE---------LYTWGRG---NYGRLGHGSSE 590
Query: 165 PNTI-----------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
I + V+CGS +A++E G + +WG +YG+LGRG +G + P
Sbjct: 591 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTP 649
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
++I+ + +V CG S A++++G+VY+WG G +LGH G +E
Sbjct: 650 KLIEKLQDL--------DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH-----GTEE 696
Query: 272 LL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ P+ + L G + DVA G H ALT +++WG + Q
Sbjct: 697 HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 92.4 bits (228), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 137/295 (46%), Gaps = 37/295 (12%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG G+ G G L PK + G AG + + IACG ++AA
Sbjct: 511 LAATGEVYSWGCGDGGRLGH-GDTVPLEEPKVIS-AFSGKQAGKHV--VHIACGSTYSAA 566
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E P V L+ V ++CG+ +A
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA------ 620
Query: 137 GTISTSRLWVWGQ----------NQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
++W WG + G P+L + I +V CGS +AL++ G
Sbjct: 621 -VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVI--KVRCGSQFSIALTKDG 677
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ +WG + +LG G T E ++ P++++G + +K+ V+ G H A++E+
Sbjct: 678 QVYSWGKGDNQRLGHG-TEEHVRYPKLLEGL--------QGKKVIDVAAGSTHCLALTED 728
Query: 247 GEVYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
EV++W GS Q H +L+ E P + LD I +ACG S A +S
Sbjct: 729 SEVHSW--GSNDQCQHFDTLRVTKPE--PTALPGLDSKHIVGIACGPAQSFAWSS 779
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 97/212 (45%), Gaps = 28/212 (13%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ ++CGS + A++ G L WG YG+LG G + E P ++ G
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-SSEDEAIPMLVAGLKGL-------- 604
Query: 229 KITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
K+ V+CG + + AV+ENG+V++WG G G+LG D P+ + L + +
Sbjct: 605 KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR---GGSDGCKTPKLIEKLQDLDVI 661
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
V CG S ALT G +Y+WG +LG G ++ + R +L G
Sbjct: 662 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG------------TEEHVRYPKLLEGLQG 709
Query: 347 VQL--VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
++ VA G +H L D +H WG N Q
Sbjct: 710 KKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 100/219 (45%), Gaps = 46/219 (21%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ QV+C + LS G + YN + P++++G A + +
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNS-----------DMLAPQLVQGLA-----SRNIV 497
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGI--- 283
KI S G +H A++ GEVY+WG G G+LGH GD L P+ + A G
Sbjct: 498 KIAAHSDG-HHYLALAATGEVYSWGCGDGGRLGH-----GDTVPLEEPKVISAFSGKQAG 551
Query: 284 -FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
+ +ACG +S A+T++G LY WG G+LG G + IP+LV
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-------------SSEDEAIPMLV 598
Query: 343 V-PNGVQL--VAC--GHSHTLVYMRDGRIHGWGYNSYGQ 376
G+++ VAC G + TL +G++ WG YG+
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Score = 72.4 bits (176), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 110/281 (39%), Gaps = 69/281 (24%)
Query: 186 GLLQAWGYNEYGQLGRGI---------TCEGLQGPRVIK--------------------G 216
G + WG+N GQLG GI CE L R ++ G
Sbjct: 3954 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4012
Query: 217 Y----------AKFLDEAPELEKITQ-------VSCGEYHSAAVSENGEVYTWGLGSVGQ 259
Y + + LE I V+ G H A+S GEVY+WG G+
Sbjct: 4013 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4072
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LGH + D+ PR + +L GI + DVA GG HS +T+ G LY WG + G+LG
Sbjct: 4073 LGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG--- 4126
Query: 320 QTRSFSLIPNESDTYFRNIPILVVP---NGVQLVAC--GHSHTLVYMRDGRIHGWGYNSY 374
SD+ + P LV + V +AC G + TL D + WG Y
Sbjct: 4127 ----------HSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDY 4176
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADA 414
G+ S P +D G V K+ G S L +
Sbjct: 4177 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4217
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG + G G + +R P+Q+ + + IA G H DG
Sbjct: 4219 AVYTWGKGDYHRLGH-GSDDHVRRPRQVQ-------GLQGKKVIAIATGSLHCVCCTEDG 4270
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
++TWG N+ GQLGDGT + P V LQ + V ++CG+ T A
Sbjct: 4271 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4317
Score = 52.4 bits (124), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 83/224 (37%), Gaps = 39/224 (17%)
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G+ Y + I CEGL V+ QV+C E +S NG VYT
Sbjct: 433 GWKYYANVIGPIQCEGLASLGVM-----------------QVACAEKRFLILSRNGRVYT 475
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWGG 309
S L P+ V L I +A G H AL + G +Y+WG
Sbjct: 476 QAYNS-------------DMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGC 522
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGW 369
G+LG G +P E V +ACG +++ +G ++ W
Sbjct: 523 GDGGRLGHG------DTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTW 576
Query: 370 GYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLA 412
G +YG+ + S P V G +V +A G G + LA
Sbjct: 577 GRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 620
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 82/218 (37%), Gaps = 62/218 (28%)
Query: 246 NGEVYTWGLGSVGQLG--------------------HCSLQSGDKELL------------ 273
+G +Y WG GQLG L G++ L
Sbjct: 3953 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4012
Query: 274 -----------------PRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWGGSQAGQ 314
P + ++ +FIK VA GG H AL+S+G +Y+WG ++ G+
Sbjct: 4013 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4072
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LG G RS P ++ R I ++ VA G +H+ G ++ WG Y
Sbjct: 4073 LGHG--NRSPCDRPRVIES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRY 4122
Query: 375 GQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
G+ + S P V+ G V +A G G + L
Sbjct: 4123 GRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTL 4160
>sp|Q8IVU3|HERC6_HUMAN Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens GN=HERC6
PE=2 SV=2
Length = 1022
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 123/242 (50%), Gaps = 19/242 (7%)
Query: 168 IICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL 227
I+ VSCG H +A+ G + AWG GQLG G E P+ I
Sbjct: 76 IVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDI------- 128
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
KI QVSCG YHS A+S++ +V++WG S GQLG + + P+RV +L+GI +
Sbjct: 129 -KIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG--KEFPSQASPQRVRSLEGIPLAQ 185
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN-G 346
VA GG HS AL+ G + WG + AGQL L + +P +S+ + + + + N G
Sbjct: 186 VAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRN-----VPVQSN---KPLSVGALKNLG 237
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGG 406
V ++CG +HT V +DG++ +G N GQ + P V+ G V ++ G
Sbjct: 238 VVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSY 297
Query: 407 HS 408
H+
Sbjct: 298 HT 299
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 160/362 (44%), Gaps = 55/362 (15%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAH 124
L A G H+ + ++ + + G N GQLG + + PE ++ L++ V +SCG
Sbjct: 26 LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKE 85
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQ-NQGS----NFPRLFWGAFTPNTI-------ICQV 172
+ A+ R++ WG ++G F + +FTP I I QV
Sbjct: 86 HSLAVCH---------KGRVFAWGAGSEGQLGIGEFKEI---SFTPKKIMTLNDIKIIQV 133
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
SCG H +ALS+ + +WG N +GQLG G P+ ++ L+ P + Q
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRS----LEGIP----LAQ 185
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
V+ G HS A+S G + WG S GQL + P V AL + + ++CG
Sbjct: 186 VAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGD 245
Query: 293 VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV--VPNGVQLV 350
H+ LT G ++ +G +++GQLG P T + P LV + V +
Sbjct: 246 AHTAVLTQDGKVFTFGDNRSGQLGYSP-------------TPEKRGPQLVERIDGLVSQI 292
Query: 351 ACGHSHTLVYMR-DGRIHGWGYN-------SYGQAANEKSTYAWYPSPVDWCVGEVRKLA 402
CG HTL Y+ G++ +G+ ++ +A E + S D+ +V+ +
Sbjct: 293 DCGSYHTLAYVHTTGQVVSFGHGPSDTSKPTHPEALTENFDISCLISAEDFVDVQVKHIF 352
Query: 403 AG 404
AG
Sbjct: 353 AG 354
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 142/315 (45%), Gaps = 60/315 (19%)
Query: 27 GYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLD-IACGHEHTAAVASDGTLFT 85
G N GQ GR+G +R +LP + + +D ++CG EH+ AV G +F
Sbjct: 48 GDNSRGQLGRRGAQR-----GELPEPI----QALETLIVDLVSCGKEHSLAVCHKGRVFA 98
Query: 86 WGANEFGQLGDGT-EEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRL 144
WGA GQLG G +E P+K+ L + +SCG + + A+++ S++
Sbjct: 99 WGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK---------DSQV 149
Query: 145 WVWGQNQ------GSNFPRLFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+ WG+N G FP +P + + QV+ G H ALS CG W
Sbjct: 150 FSWGKNSHGQLGLGKEFP----SQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW 205
Query: 192 GYNEYGQL---GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
G N GQL GR + + + V G K L + +SCG+ H+A ++++G+
Sbjct: 206 GSNSAGQLALSGRNVPVQSNKPLSV--GALKNLG-------VVYISCGDAHTAVLTQDGK 256
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
V+T+G GQLG+ ++ P+ V +DG+ + + CG H+ A Y
Sbjct: 257 VFTFGDNRSGQLGY---SPTPEKRGPQLVERIDGL-VSQIDCGSYHTLA-------YVHT 305
Query: 309 GSQAGQLGLGPQTRS 323
Q G GP S
Sbjct: 306 TGQVVSFGHGPSDTS 320
Score = 92.0 bits (227), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 95/186 (51%), Gaps = 14/186 (7%)
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
++ Q + GE HS + N V + G S GQLG Q G+ LP + AL+ + + V
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGE---LPEPIQALETLIVDLV 80
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ 348
+CG HS A+ KG ++AWG GQLG+G + + S P + T +I I+
Sbjct: 81 SCGKEHSLAVCHKGRVFAWGAGSEGQLGIG-EFKEISFTPKKIMT-LNDIKIIQ------ 132
Query: 349 LVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAW-YPSPVDWCVG-EVRKLAAGGG 406
V+CGH H+L +D ++ WG NS+GQ K + P V G + ++AAGG
Sbjct: 133 -VSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 191
Query: 407 HSAVLA 412
HS L+
Sbjct: 192 HSFALS 197
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 117/242 (48%), Gaps = 25/242 (10%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
K ++ WG GQ G + PK++ + + + ++CGH H+ A++
Sbjct: 93 KGRVFAWGAGSEGQLGIGEFKEISFTPKKIM-------TLNDIKIIQVSCGHYHSLALSK 145
Query: 80 DGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISC-GAHCTA-AIAEPREND 136
D +F+WG N GQLG G E + P++V+ L+ + ++ GAH A ++
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGW 205
Query: 137 GTISTSRLWVWGQN--QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYN 194
G+ S +L + G+N SN P L GA N + +SCG H L++ G + +G N
Sbjct: 206 GSNSAGQLALSGRNVPVQSNKP-LSVGALK-NLGVVYISCGDAHTAVLTQDGKVFTFGDN 263
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA-VSENGEVYTWG 253
GQLG T E +GP++++ ++Q+ CG YH+ A V G+V ++G
Sbjct: 264 RSGQLGYSPTPEK-RGPQLVERIDGL---------VSQIDCGSYHTLAYVHTTGQVVSFG 313
Query: 254 LG 255
G
Sbjct: 314 HG 315
Score = 41.6 bits (96), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 58/144 (40%), Gaps = 12/144 (8%)
Query: 270 KELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPN 329
+EL RR G + A G HS L + + + G + GQLG R
Sbjct: 10 RELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQR------G 63
Query: 330 ESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQ-AANEKSTYAWYP 388
E + + L+ V LV+CG H+L GR+ WG S GQ E ++ P
Sbjct: 64 ELPEPIQALETLI----VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTP 119
Query: 389 SPVDWCVGEVRKLAAGGGHSAVLA 412
+ + +++ + GH LA
Sbjct: 120 KKI-MTLNDIKIIQVSCGHYHSLA 142
>sp|O95714|HERC2_HUMAN E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=2
Length = 4834
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 176/411 (42%), Gaps = 67/411 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVAS 79
++ ++VWG N Q G L+ K P + N + +A G + AV
Sbjct: 2958 RTKVFVWGLNDKDQLG------GLKGSKIKVPSFSETLSALNV--VQVAGGSKSLFAVTV 3009
Query: 80 DGTLFTWGANEFGQLGDGTEEGR-KHPEKVKQLQSEFVKSISC---GAHCTAAIAEPREN 135
+G ++ G G+LG G G P ++ L S VK ++ G H TA
Sbjct: 3010 EGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV----- 3064
Query: 136 DGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
DG +++ WG+ PRL T I ++CGS H AL+
Sbjct: 3065 DG-----KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSS 3117
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGP--RVIKGYAKFLDEAPELEKITQVSCG--EYHSA 241
G L WG EYG+LG G L+ +V+ G+ ++ QV+CG + +
Sbjct: 3118 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-----------RVIQVACGSRDAQTL 3166
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A+++ G V++WG G G+LG + + +P+ + L+G + + CG S ALT
Sbjct: 3167 ALTDEGLVFSWGDGDFGKLGRGGSEGCN---IPQNIERLNGQGVCQIECGAQFSLALTKS 3223
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV--ACGHSHTLV 359
G ++ WG +LG G SD + R ++ G ++V A G H L
Sbjct: 3224 GVVWTWGKGDYFRLGHG------------SDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3271
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSA 409
G+++ WG N +GQ N +T P+ V G+ + ++A G HS
Sbjct: 3272 VTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3322
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G G+ G ++ K P L A R DIACG H+AA+ S G
Sbjct: 3068 VFSWG---EGDDGKLGHFSRMNCDK---PRLI--EALKTKRIRDIACGSSHSAALTSSGE 3119
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG E+G+LG G + P+ VK L V ++CG+ +A E
Sbjct: 3120 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG------- 3172
Query: 143 RLWVWGQNQGSNFPRL----FWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
++ WG +F +L G P I +CQ+ CG+ +AL++ G++ W
Sbjct: 3173 LVFSWGDG---DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3229
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G +Y +LG G ++ P+V++G +KI V+ G H AV+++G+VY
Sbjct: 3230 GKGDYFRLGHGSDVH-VRKPQVVEGLRG--------KKIVHVAVGALHCLAVTDSGQVYA 3280
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG GQ G+ + K P V L+G I VACG HS A T+
Sbjct: 3281 WGDNDHGQQGNGTTTVNRK---PTLVQGLEGQKITRVACGSSHSVAWTT 3326
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 165/357 (46%), Gaps = 52/357 (14%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ + +Y G +G+ G + IP+Q+ + + + + G H A
Sbjct: 3007 VTVEGKVYACGEATNGRLGLGISSGTVPIPRQI-----TALSSYVVKKVAVHSGGRHATA 3061
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ DG +F+WG + G+LG + P ++ L+++ ++ I+CG+ +AA+
Sbjct: 3062 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------ 3115
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGS--VHVVALS 183
S+ L+ WG + + RL G T P + + QV+CGS +AL+
Sbjct: 3116 ---SSGELYTWGLGE---YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3169
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
+ GL+ +WG ++G+LGRG EG P+ I E + + Q+ CG S A+
Sbjct: 3170 DEGLVFSWGDGDFGKLGRG-GSEGCNIPQNI--------ERLNGQGVCQIECGAQFSLAL 3220
Query: 244 SENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA 303
+++G V+TWG G +LGH S K P+ V L G I VA G +H A+T G
Sbjct: 3221 TKSGVVWTWGKGDYFRLGHGSDVHVRK---PQVVEGLRGKKIVHVAVGALHCLAVTDSGQ 3277
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+YAWG + GQ G G T N T + + + VACG SH++ +
Sbjct: 3278 VYAWGDNDHGQQGNGTTTV------NRKPTLVQGLE----GQKITRVACGSSHSVAW 3324
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 144/327 (44%), Gaps = 50/327 (15%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+Y WG G+ G R R P + G +D+A G H+A V + G
Sbjct: 4060 VYSWGEAEDGKLGHGNRSPCDR------PRVIESLRGIEV--VDVAAGGAHSACVTAAGD 4111
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +G+LG E + P+ V+ LQ V I+CG+ + +D T+
Sbjct: 4112 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC--LTDDDTV--- 4166
Query: 143 RLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLLQAWGYN 194
W WG R G P I + +V CGS VAL++ G + WG
Sbjct: 4167 --WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4224
Query: 195 EYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL 254
+Y +LG G + + ++ PR ++G + +K+ ++ G H +E+GEVYTWG
Sbjct: 4225 DYHRLGHG-SDDHVRRPRQVQGL--------QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4275
Query: 255 GSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
GQLG + + + PR V AL G + VACG H+ AW S+
Sbjct: 4276 NDEGQLGDGTTNAIQR---PRLVAALQGKKVNRVACGSAHT---------LAWSTSKPAS 4323
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPIL 341
G P + +P E + + + IPI+
Sbjct: 4324 AGKLP-----AQVPMEYN-HLQEIPII 4344
Score = 106 bits (264), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 174/411 (42%), Gaps = 76/411 (18%)
Query: 23 IYVWGYNHSGQTGRKGRE-RQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
IY WG+NH GQ G G E ++++P C A A R + + G + AV +DG
Sbjct: 3954 IYGWGHNHRGQLG--GIEGAKVKVPTP-------CEALATLRPVQLIGGEQTLFAVTADG 4004
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC---GAHCTAAIAEPRENDGT 138
L+ G G+LG G E P ++ +Q F+K ++ G HC A +E
Sbjct: 4005 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE------- 4057
Query: 139 ISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
++ WG+ + PR+ + V+ G H ++ G L
Sbjct: 4058 ---GEVYSWGEAEDGKLGHGNRSPCDRPRVIES--LRGIEVVDVAAGGAHSACVTAAGDL 4112
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSEN 246
WG YG+LG + + L+ P+++ EA + ++ ++C G+ + ++++
Sbjct: 4113 YTWGKGRYGRLGHSDSEDQLK-PKLV--------EALQGHRVVDIACGSGDAQTLCLTDD 4163
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYA 306
V++WG G G+LG D +P ++ +L G+ + V CG S ALT GA+Y
Sbjct: 4164 DTVWSWGDGDYGKLGR---GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 4220
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQ--------LVACGHSHTL 358
WG +LG G SD + R P VQ +A G H +
Sbjct: 4221 WGKGDYHRLGHG------------SDDHVRR------PRQVQGLQGKKVIAIATGSLHCV 4262
Query: 359 VYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS 408
DG ++ WG N GQ + + P V G +V ++A G H+
Sbjct: 4263 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHT 4313
Score = 106 bits (264), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 129/276 (46%), Gaps = 25/276 (9%)
Query: 143 RLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
R++ N + P+L G + N + H +AL+ G + +WG + G+LG G
Sbjct: 471 RVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG 530
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
T L+ P+VI ++ + + ++CG +SAA++ GE+YTWG G+ G+LGH
Sbjct: 531 DTVP-LEEPKVISAFSG----KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 585
Query: 263 CSLQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQ 320
S + E +P V L G+ + DVACG + A+T G +++WG G+LG G
Sbjct: 586 ---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 642
Query: 321 T--RSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
++ LI D V V CG ++ +DG+++ WG +
Sbjct: 643 DGCKTPKLIEKLQDL------------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 690
Query: 379 NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLAD 413
+ + YP ++ G +V +AAG H L +
Sbjct: 691 HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726
Score = 102 bits (255), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 124/253 (49%), Gaps = 30/253 (11%)
Query: 134 ENDGTISTSRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
E+ TI T +++VWG N +GS + + QV+ GS + A++
Sbjct: 2952 ESAATIRT-KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G + A G G+LG GI+ + PR I + ++ K V G H+ A++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYV------VKKVAVHSGGRHATALTV 3064
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
+G+V++WG G G+LGH S + DK PR + AL I+D+ACG HS ALTS G LY
Sbjct: 3065 DGKVFSWGEGDDGKLGHFSRMNCDK---PRLIEALKTKRIRDIACGSSHSAALTSSGELY 3121
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG--HSHTLVYMRD 363
WG + G+LG G T L P + + +L+ +Q VACG + TL +
Sbjct: 3122 TWGLGEYGRLGHGDNTT--QLKP-------KMVKVLLGHRVIQ-VACGSRDAQTLALTDE 3171
Query: 364 GRIHGWGYNSYGQ 376
G + WG +G+
Sbjct: 3172 GLVFSWGDGDFGK 3184
Score = 99.0 bits (245), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 134/310 (43%), Gaps = 53/310 (17%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQS-EFVKSISCGAHC 125
+ G +H A++S+G +++WG E G+LG G P ++ L+ E V + GAH
Sbjct: 4044 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4103
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAFTPNTIICQVSCG 175
A L+ WG+ + P+L A + ++ ++CG
Sbjct: 4104 ACVTA----------AGDLYTWGKGRYGRLGHSDSEDQLKPKLV-EALQGHRVV-DIACG 4151
Query: 176 S--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
S + L++ + +WG +YG+LGRG +G + P I + +V
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGL--------GVVKV 4202
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGV 293
CG S A++++G VYTWG G +LGH S D PR+V L G + +A G +
Sbjct: 4203 ECGSQFSVALTKSGAVYTWGKGDYHRLGH---GSDDHVRRPRQVQGLQGKKVIAIATGSL 4259
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP---NGVQLV 350
H T G +Y WG + GQLG G T P LV V V
Sbjct: 4260 HCVCCTEDGEVYTWGDNDEGQLGDG-------------TTNAIQRPRLVAALQGKKVNRV 4306
Query: 351 ACGHSHTLVY 360
ACG +HTL +
Sbjct: 4307 ACGSAHTLAW 4316
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 45/285 (15%)
Query: 49 LPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV 108
L P+L A N + H A+A+ G +++WG + G+LG G + P+ +
Sbjct: 482 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVI 541
Query: 109 KQLQ----SEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT 164
+ V I+CG+ +AAI E L+ WG+ N+ RL G+
Sbjct: 542 SAFSGKQAGKHVVHIACGSTYSAAITAEGE---------LYTWGRG---NYGRLGHGSSE 589
Query: 165 PNTI-----------ICQVSCGS--VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
I + V+CGS +A++E G + +WG +YG+LGRG +G + P
Sbjct: 590 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTP 648
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE 271
++I+ + +V CG S A++++G+VY+WG G +LGH G +E
Sbjct: 649 KLIEKLQDL--------DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH-----GTEE 695
Query: 272 LL--PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQ 314
+ P+ + L G + DVA G H ALT +++WG + Q
Sbjct: 696 HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 136/293 (46%), Gaps = 33/293 (11%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ A +Y WG G+ G G L PK + G AG + + IACG ++AA
Sbjct: 510 LAATGEVYSWGCGDGGRLGH-GDTVPLEEPKVIS-AFSGKQAGKHV--VHIACGSTYSAA 565
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ ++G L+TWG +G+LG G+ E P V L+ V ++CG+ +A
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA------ 619
Query: 137 GTISTSRLWVWGQNQGSNFPR-LFWGAFTPNTI-------ICQVSCGSVHVVALSECGLL 188
++W WG R G TP I + +V CGS +AL++ G +
Sbjct: 620 -VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQV 678
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
+WG + +LG G T E ++ P++++G + +K+ V+ G H A++E+ E
Sbjct: 679 YSWGKGDNQRLGHG-TEEHVRYPKLLEGL--------QGKKVIDVAAGSTHCLALTEDSE 729
Query: 249 VYTWGLGSVGQLGHC-SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
V++W GS Q H +L+ E P + LD I +ACG S A +S
Sbjct: 730 VHSW--GSNDQCQHFDTLRVTKPE--PAALPGLDTKHIVGIACGPAQSFAWSS 778
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 139/340 (40%), Gaps = 63/340 (18%)
Query: 56 CPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF 115
C AN IAC + ++ +G ++T N P+ V+ L S
Sbjct: 445 CEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRN 494
Query: 116 VKSISCGA--HCTAAIAEPRENDGTISTSRLWVWGQNQGSNF----------PRLFWGAF 163
+ I+ + H A+A +T ++ WG G P++ AF
Sbjct: 495 IVKIAAHSDGHHYLALA---------ATGEVYSWGCGDGGRLGHGDTVPLEEPKVI-SAF 544
Query: 164 TPNTI---ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKF 220
+ + ++CGS + A++ G L WG YG+LG G + E P ++ G
Sbjct: 545 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-SSEDEAIPMLVAGLKGL 603
Query: 221 LDEAPELEKITQVSCG--EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV 278
K+ V+CG + + AV+ENG+V++WG G G+LG D P+ +
Sbjct: 604 --------KVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGR---GGSDGCKTPKLIE 652
Query: 279 ALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNI 338
L + + V CG S ALT G +Y+WG +LG G ++ + R
Sbjct: 653 KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG------------TEEHVRYP 700
Query: 339 PILVVPNGVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+L G ++ VA G +H L D +H WG N Q
Sbjct: 701 KLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 110/281 (39%), Gaps = 69/281 (24%)
Query: 186 GLLQAWGYNEYGQLGRGI---------TCEGLQGPRVIK--------------------G 216
G + WG+N GQLG GI CE L R ++ G
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010
Query: 217 Y----------AKFLDEAPELEKITQ-------VSCGEYHSAAVSENGEVYTWGLGSVGQ 259
Y + + LE I V+ G H A+S GEVY+WG G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LGH + D+ PR + +L GI + DVA GG HS +T+ G LY WG + G+LG
Sbjct: 4071 LGHGNRSPCDR---PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG--- 4124
Query: 320 QTRSFSLIPNESDTYFRNIPILVVP---NGVQLVAC--GHSHTLVYMRDGRIHGWGYNSY 374
SD+ + P LV + V +AC G + TL D + WG Y
Sbjct: 4125 ----------HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDY 4174
Query: 375 GQAANEKSTYAWYPSPVDWCVGE-VRKLAAGGGHSAVLADA 414
G+ S P +D G V K+ G S L +
Sbjct: 4175 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4215
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
A+Y WG + G G + +R P+Q+ + + IA G H DG
Sbjct: 4217 AVYTWGKGDYHRLGH-GSDDHVRRPRQVQ-------GLQGKKVIAIATGSLHCVCCTEDG 4268
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
++TWG N+ GQLGDGT + P V LQ + V ++CG+ T A
Sbjct: 4269 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 74/186 (39%), Gaps = 22/186 (11%)
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
+TQ++C E +S NG VYT S L P+ V L I +A
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------------DTLAPQLVQGLASRNIVKIA 499
Query: 290 C--GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
G H AL + G +Y+WG G+LG G +P E V
Sbjct: 500 AHSDGHHYLALAATGEVYSWGCGDGGRLGHG------DTVPLEEPKVISAFSGKQAGKHV 553
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGG 406
+ACG +++ +G ++ WG +YG+ + S P V G +V +A G G
Sbjct: 554 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSG 613
Query: 407 HSAVLA 412
+ LA
Sbjct: 614 DAQTLA 619
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 82/218 (37%), Gaps = 62/218 (28%)
Query: 246 NGEVYTWGLGSVGQLG--------------------HCSLQSGDKELL------------ 273
+G +Y WG GQLG L G++ L
Sbjct: 3951 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010
Query: 274 -----------------PRRVVALDGIFIKDVAC--GGVHSCALTSKGALYAWGGSQAGQ 314
P + ++ +FIK VA GG H AL+S+G +Y+WG ++ G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070
Query: 315 LGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
LG G RS P ++ R I ++ VA G +H+ G ++ WG Y
Sbjct: 4071 LGHG--NRSPCDRPRVIES-LRGIEVVD-------VAAGGAHSACVTAAGDLYTWGKGRY 4120
Query: 375 GQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVL 411
G+ + S P V+ G V +A G G + L
Sbjct: 4121 GRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTL 4158
>sp|Q9UII4|HERC5_HUMAN E3 ISG15--protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=2
Length = 1024
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/258 (34%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I Q++CG H +ALS+ G L AWG N +GQLG G P++++ A
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGV-------- 191
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
+ Q+S GE HS A+S +G +Y+WG GQLG +S D P + LD ++ V
Sbjct: 192 PLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDD---PSLIEGLDNQKVEFV 248
Query: 289 ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV---VPN 345
ACGG HS LT G L+ +G + GQLG N + R P LV V
Sbjct: 249 ACGGSHSALLTQDGLLFTFGAGKHGQLG-----------HNSTQNELR--PCLVAELVGY 295
Query: 346 GVQLVACGHSHTLVYMRD-GRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL--- 401
V +ACG HTL Y+ D G++ +G GQ N + P PV E KL
Sbjct: 296 RVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESH 355
Query: 402 --------AAGGGHSAVL 411
AGG S +L
Sbjct: 356 TSEKELIMIAGGNQSILL 373
Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 94/185 (50%), Gaps = 19/185 (10%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+KI Q++CG+YHS A+S+ GE++ WG GQLG + P+ V L G+ +
Sbjct: 138 KKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG--RKFPSTTTPQIVEHLAGVPLAQ 195
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV---P 344
++ G HS AL+ G +Y+WG ++ GQLGLG T ++ P L+
Sbjct: 196 ISAGEAHSMALSMSGNIYSWGKNECGQLGLG-------------HTESKDDPSLIEGLDN 242
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAA 403
V+ VACG SH+ + +DG + +G +GQ + + P V VG V ++A
Sbjct: 243 QKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIAC 302
Query: 404 GGGHS 408
G H+
Sbjct: 303 GRWHT 307
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 36/215 (16%)
Query: 62 SRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSIS 120
+ + I CG H+ A++ G LF WG N GQLG G + P+ V+ L + IS
Sbjct: 138 KKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQIS 197
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQN----------QGSNFPRLFWGAFTPNTIIC 170
G + A++ + ++ WG+N + + P L G N +
Sbjct: 198 AGEAHSMALS---------MSGNIYSWGKNECGQLGLGHTESKDDPSLIEG--LDNQKVE 246
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRV--IKGYAKFLDEAPELE 228
V+CG H L++ GLL +G ++GQLG T L+ V + GY
Sbjct: 247 FVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGY----------- 295
Query: 229 KITQVSCGEYHSAA-VSENGEVYTWGLGSVGQLGH 262
++TQ++CG +H+ A VS+ G+V+++G G GQLG+
Sbjct: 296 RVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGN 330
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 91/190 (47%), Gaps = 15/190 (7%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG N GQ G GR+ Q+ L G P I+ G H+ A++ G
Sbjct: 159 LFAWGQNLHGQLGV-GRKFPSTTTPQIVEHLAGVPLA------QISAGEAHSMALSMSGN 211
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTIST- 141
+++WG NE GQLG G E + P ++ L ++ V+ ++CG +A + + DG + T
Sbjct: 212 IYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQ----DGLLFTF 267
Query: 142 --SRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA-LSECGLLQAWGYNEYGQ 198
+ G N N R A + Q++CG H +A +S+ G + ++G + GQ
Sbjct: 268 GAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQ 327
Query: 199 LGRGITCEGL 208
LG G T + L
Sbjct: 328 LGNGGTRDQL 337
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD-G 81
++ +G GQ G + +LR L EL G R IACG HT A SD G
Sbjct: 264 LFTFGAGKHGQLGHNSTQNELR--PCLVAELVG------YRVTQIACGRWHTLAYVSDLG 315
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVK 117
+F++G+ + GQLG+G + P VK SE +K
Sbjct: 316 KVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELK 351
>sp|Q8NDN9|RCBT1_HUMAN RCC1 and BTB domain-containing protein 1 OS=Homo sapiens GN=RCBTB1
PE=2 SV=1
Length = 531
Score = 115 bits (289), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 141/304 (46%), Gaps = 39/304 (12%)
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
V + +F +G N LG G + P+K++ L + +KS+S G+ ++ D
Sbjct: 37 VTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLST---ED 93
Query: 137 GTISTSRLWVWGQN------QGSNFPRLFWGAFTPNTIICQV---SCGSVHVVALSECGL 187
G + + WG N G+ + N +I QV +CGS H +AL+ G
Sbjct: 94 GVV-----YAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGE 148
Query: 188 LQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENG 247
+ AWGYN GQ+G G T PR + ++++ ++CG+ S AV +NG
Sbjct: 149 VFAWGYNNCGQVGSGSTANQ-PTPRKVT-------NCLHIKRVVGIACGQTSSMAVLDNG 200
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAW 307
EVY WG GQLG L + +L P RV AL + + + CG H+ ALT +G LYAW
Sbjct: 201 EVYGWGYNGNGQLG---LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAW 257
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRI 366
G + GQLG G + S P + V++ AC +HT + G +
Sbjct: 258 GANTYGQLGTGNKNNLLS--PAHIMVEKERV--------VEIAACHSAHTSAAKTQGGHV 307
Query: 367 HGWG 370
+ WG
Sbjct: 308 YMWG 311
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 126/269 (46%), Gaps = 37/269 (13%)
Query: 148 GQNQGSNFPRLFWGAFTPNTIICQVSCGS-VHVVALSECGLLQAWGYNEYGQLGRGITCE 206
G NQ + P+ G I +S GS HV+ +E G++ AWG+N Y QLG G T +
Sbjct: 57 GDNQSTLVPKKLEGLCGKK--IKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQ 114
Query: 207 GLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQ 266
G+ +V ++++ +V+CG +HS A++ +GEV+ WG + GQ+G S
Sbjct: 115 GIAPVQVCTNLL--------IKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTA 166
Query: 267 SGDKELLPRRVVALDGIFIKDV---ACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRS 323
+ + PR+V + + IK V ACG S A+ G +Y WG + GQLGLG
Sbjct: 167 N---QPTPRKVT--NCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ 221
Query: 324 FSLIPNESDTYFRNIPILVVPNG---VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANE 380
+ P+ V V + CG++HTL +G ++ WG N+YGQ
Sbjct: 222 LT-------------PVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268
Query: 381 KSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
SP V + R + HSA
Sbjct: 269 NKNNLL--SPAHIMVEKERVVEIAACHSA 295
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 113/452 (25%), Positives = 177/452 (39%), Gaps = 69/452 (15%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+Y WG+N Q G G Q P Q+ C + +++ACG H+ A+A+DG
Sbjct: 95 VVYAWGHNGYSQLGN-GTTNQGIAPVQV------CTNLLIKQVVEVACGSHHSMALAADG 147
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIS 140
+F WG N GQ+G G+ + P KV L + V I+CG + A+ + E G
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYG--- 204
Query: 141 TSRLWVWGQN------QGSNFPRLFWGAFTPNTIIC--QVSCGSVHVVALSECGLLQAWG 192
WG N G+N +L +C Q+ CG H +AL++ GLL AWG
Sbjct: 205 ------WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Query: 193 YNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G L ++ E E++ ++ +C H SAA ++ G VY
Sbjct: 259 ANTYGQLGTGNKNNLLSPAHIM----------VEKERVVEIAACHSAHTSAAKTQGGHVY 308
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC-GGVHSCALTSKGALYAWGG 309
W G C G +LP + +C V +C T +
Sbjct: 309 MW--------GQC---RGQSVILPH---------LTHFSCTDDVFACFATPAVSWRLLSV 348
Query: 310 SQAGQLGLGPQTRSFSLIPNESDTYFR-NIPILVVPNGVQLVACGHSHTLVYMRDGRIHG 368
L + + P +D FR + + V V + C H ++
Sbjct: 349 EHEDFLTVAESLKKEFDSPETADLKFRIDGKYIHVHKAVLKIRCEHFRSMFQSY------ 402
Query: 369 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL----AAGGGHSAVLADACSLKELCEFR 424
W + ++ +Y Y + + + + L A G A LK+LC+
Sbjct: 403 WNEDMKEVIEIDQFSYPVYRAFLQYLYTDTVDLPPEDAIGLLDLATSYCENRLKKLCQHI 462
Query: 425 LAESVTLSNASEIEDVASRTGSEALARLCERL 456
+ +T+ NA + A R +E L C +
Sbjct: 463 IKRGITVENAFSLFSAAVRYDAEDLEEFCFKF 494
Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 140/334 (41%), Gaps = 46/334 (13%)
Query: 6 IIGETARPVDNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWL 65
+ G +A + ++V+G N+S G G + +PK+L G + L
Sbjct: 26 VFGTSASEALYVTDNDEVFVFGLNYSNCLG-TGDNQSTLVPKKLEG-----LCGKKIKSL 79
Query: 66 DIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV-KQLQSEFVKSISCGAH 124
G H DG ++ WG N + QLG+GT P +V L + V ++CG+H
Sbjct: 80 SYGSG-PHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSH 138
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQ------GSN----FPRLFWGAFTPNTIICQVSC 174
+ A+A E ++ WG N GS PR ++ ++C
Sbjct: 139 HSMALAADGE---------VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVV-GIAC 188
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G +A+ + G + WGYN GQLG G L RV A + Q+
Sbjct: 189 GQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRV---------AALHSVCVNQIV 239
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACGG 292
CG H+ A+++ G +Y WG + GQLG +G+K L P ++ ++ AC
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLG-----TGNKNNLLSPAHIMVEKERVVEIAACHS 294
Query: 293 VH-SCALTSKGALYAWGGSQAGQLGLGPQTRSFS 325
H S A T G +Y WG + GQ + P FS
Sbjct: 295 AHTSAAKTQGGHVYMWGQCR-GQSVILPHLTHFS 327
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 17/173 (9%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKE--LLPRRVVALDGIFIKDVACG-GVHSCALT 299
V++N EV+ +GL LG +GD + L+P+++ L G IK ++ G G H T
Sbjct: 37 VTDNDEVFVFGLNYSNCLG-----TGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLST 91
Query: 300 SKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLV 359
G +YAWG + QLG G + + + ++ L++ V+ VACG H++
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTN--------LLIKQVVE-VACGSHHSMA 142
Query: 360 YMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLA 412
DG + WGYN+ GQ + + P V C+ R + G ++ +A
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMA 195
>sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1
PE=1 SV=2
Length = 4861
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 173/382 (45%), Gaps = 79/382 (20%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI--- 139
++ WGA GQL E GR + + CG +CT I + +GT+
Sbjct: 3999 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVI----QANGTVLAC 4051
Query: 140 ---STSRLWVWGQNQGSNFPRLFWGAFTPNTIICQV--SCGSV-HVVALSECGLLQAWGY 193
S RL GQ + L + ++ Q+ SCGS H +AL+E G + +WG
Sbjct: 4052 GEGSYGRL---GQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 4108
Query: 194 NEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG 253
+YG+LG G + + PR I EA + E++ Q+SCG HSA V+ +G+++T+G
Sbjct: 4109 GDYGKLGHG-NSDRQRRPRQI--------EALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4159
Query: 254 LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL-YAWGGSQA 312
G G+LG L + + LP RV AL+G I VACG H+ A+++ G++ +A+G
Sbjct: 4160 NGDYGRLG---LGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4216
Query: 313 GQLGLGPQTRSFSLIPNESDTY--------------------------FRNIPILVVPNG 346
G+LGLG T S P + D F ++ +P G
Sbjct: 4217 GKLGLGNSTAKSS--PQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4274
Query: 347 ------------------VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYP 388
++ VA G HTL +G ++ WG NS GQ + + P
Sbjct: 4275 RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP 4334
Query: 389 SPVDWCVGE-VRKLAAGGGHSA 409
+ V G+ VR+++AG HSA
Sbjct: 4335 TLVTGLQGKNVRQISAGRCHSA 4356
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 182/405 (44%), Gaps = 67/405 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWG N S Q +E+ L+ PK P + S I G T +++DG+
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQ-PKLAP---------SFSDAQTIEAGQYCTFVISTDGS 423
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDG----T 138
+ G +G+LG G + +K+L E +SI ++ + +DG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQS---TLKKLTFEPHRSIK-------KVSSSKGSDGHTLAF 473
Query: 139 ISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLL 188
+ ++ WG + +P+L G ++C VS G H A++E G L
Sbjct: 474 TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGEL 532
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG ++G+LG G + P ++K ++ + +VSCG H+ A+S++G
Sbjct: 533 YTWGEGDFGRLGHGDS-NSRNIPTLVK----------DISNVGEVSCGSSHTIALSKDGR 581
Query: 249 -VYTWGLGSVGQLGHCSLQSGDKELL--PRRVVALDGIFIKDVACGGVHSCALTSKGALY 305
V+++G G G+LGH GD + P+ + AL G+FI+ V G S ALTS G +Y
Sbjct: 582 TVWSFGGGDNGKLGH-----GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVY 636
Query: 306 AWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGR 365
AWG LG G + + +L P + I L V V+ G SH L D
Sbjct: 637 AWGCGAC--LGCG-SSEATALRP-------KLIEELAATRIVD-VSIGDSHCLALSHDNE 685
Query: 366 IHGWGYNSYGQAANEKST-YAWYPSPVDWCVG-EVRKLAAGGGHS 408
++ WG NS GQ ST P V G +++++AG HS
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 166/377 (44%), Gaps = 85/377 (22%)
Query: 1 MDINEIIGETARPVD-NIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPP-------- 51
MD + T+RP D ++ K +Y+WG GQ GR + +P P
Sbjct: 3976 MDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLAEAGR--NVMVPAAAPSFSQAQQVI 4033
Query: 52 -------------ELFGCPAGANSRW------------------------LDIACGHE-H 73
+ C G+ R L +CG + H
Sbjct: 4034 CGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGH 4093
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
+ A+ G +F+WG ++G+LG G + ++ P +++ LQ E V +SCG +A +
Sbjct: 4094 SMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT--- 4150
Query: 134 ENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI-----------ICQVSCGSVHVVAL 182
+DG +L+ +G ++ RL G + + I QV+CG H +A+
Sbjct: 4151 -SDG-----KLFTFGNG---DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV 4201
Query: 183 SECG-LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
S G ++ A+G +YG+LG G P+ I I +V+CG S
Sbjct: 4202 SADGSMVWAFGDGDYGKLGLG-NSTAKSSPQKIDVLCGI--------GIKKVACGTQFSV 4252
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSK 301
A++++G VYT+G + L ++ ++ P+++ L G+ I+DVA G H+ AL S
Sbjct: 4253 ALTKDGHVYTFGQDRLIGLPEGRARNHNR---PQQIPVLAGVIIEDVAVGAEHTLALASN 4309
Query: 302 GALYAWGGSQAGQLGLG 318
G +YAWG + GQLGLG
Sbjct: 4310 GDVYAWGSNSEGQLGLG 4326
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 143/307 (46%), Gaps = 43/307 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G +RQ R P+Q+ A + ++CG +H+A V SDG
Sbjct: 4103 VFSWGDGDYGKLGHGNSDRQRR-PRQIE-------ALQGEEVVQMSCGFKHSAVVTSDGK 4154
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
LFT+G ++G+LG G +K PE+V L+ + ++CG + T A++ DG++
Sbjct: 4155 LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA----DGSM--- 4207
Query: 143 RLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G ++ +L G T P I I +V+CG+ VAL++ G + +
Sbjct: 4208 -VWAFGDG---DYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4263
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G + L G P+ I A + I V+ G H+ A++ NG+VY
Sbjct: 4264 GQDRLIGLPEG-RARNHNRPQQIPVLAGVI--------IEDVAVGAEHTLALASNGDVYA 4314
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGA-LYAWGGS 310
WG S GQLG L + P V L G ++ ++ G HS A T+ A G S
Sbjct: 4315 WGSNSEGQLG---LGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVS 4371
Query: 311 QAGQLGL 317
QLGL
Sbjct: 4372 VPLQLGL 4378
Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG G+ G Q + PK + L G + ++ G+ H+AAV DG
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQG------KVVVCVSAGYRHSAAVTEDGE 531
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
L+TWG +FG+LG G R P VK + + V +SCG+ T A+++ DG
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSK----DGRT--- 582
Query: 143 RLWVWGQNQGSNFPRLFWG----AFTPNTI-------ICQVSCGSVHVVALSECGLLQAW 191
+W +G G + +L G + P I I +V GS +AL+ G + AW
Sbjct: 583 -VWSFG---GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
G LG G + P++I+ A +I VS G+ H A+S + EVY
Sbjct: 639 GCG--ACLGCGSSEATALRPKLIEELAA--------TRIVDVSIGDSHCLALSHDNEVYA 688
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS 300
WG S+GQ G + S P++V LDGI I+ ++ G HS A T+
Sbjct: 689 WGNNSMGQCGQGN--STGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 30/228 (13%)
Query: 191 WGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVY 250
WG +GQL G V+ A AP + QV CG+ + + NG V
Sbjct: 4002 WGAGRHGQLAEA-------GRNVMVPAA-----APSFSQAQQVICGQNCTFVIQANGTVL 4049
Query: 251 TWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV--ACGGV-HSCALTSKGALYAW 307
G GS G+LG + S D +L + AL G + + +CG HS ALT G +++W
Sbjct: 4050 ACGEGSYGRLGQGN--SDDLHVL-TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSW 4106
Query: 308 GGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIH 367
G G+LG G R R I L VQ+ +CG H+ V DG++
Sbjct: 4107 GDGDYGKLGHGNSDR---------QRRPRQIEALQGEEVVQM-SCGFKHSAVVTSDGKLF 4156
Query: 368 GWGYNSYGQAANEKSTYAWYPSPVDWCVG-EVRKLAAGGGHS-AVLAD 413
+G YG+ ++ P V G ++ ++A G H+ AV AD
Sbjct: 4157 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 4204
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKG 302
VSE EVY WG S QL G +E + + +A + + G + +++ G
Sbjct: 368 VSETCEVYVWGSNSSHQLVE-----GTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMR 362
++ A G G+LGLG +L + + R+I + G HTL +
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH-RSIKKVSSSKG------SDGHTLAFTT 475
Query: 363 DGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV-GEVRK-LAAGGGHSAVLAD 413
+G + WG YG+ + S+ YP + + G+V ++AG HSA + +
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
>sp|Q5RCZ7|RCBT2_PONAB RCC1 and BTB domain-containing protein 2 OS=Pongo abelii GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 112/227 (49%), Gaps = 22/227 (9%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H+V + G + WG+N Y QLG G T GL + + +++ +V+CG
Sbjct: 110 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN--------KQVIEVACGS 161
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHSC 296
YHS ++ +GEV+ WG + GQ+G S + + +PRRV L + +ACG +
Sbjct: 162 YHSLVLTSDGEVFAWGYNNSGQVGSGSTVN---QPIPRRVTGCLQNKVVVTIACGQMCCM 218
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G +Y WG + GQLGLG + + R VQ VACG++H
Sbjct: 219 AVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR----------VQRVACGYAH 268
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 403
TLV +G+++ WG NSYGQ + YP+PV + ++AA
Sbjct: 269 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA 315
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 131/300 (43%), Gaps = 43/300 (14%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTAAIAEPRENDGTIS 140
+F G N G LG G + P ++ L + + +S G+ H A E
Sbjct: 67 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTE--------- 117
Query: 141 TSRLWVWGQNQGSNFPR---------LFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
++ WG N S N + +V+CGS H + L+ G + AW
Sbjct: 118 -GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAW 176
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
GYN GQ+G G T PR + G + + + ++CG+ AV + GEVY
Sbjct: 177 GYNNSGQVGSGSTVNQ-PIPRRVTG-------CLQNKVVVTIACGQMCCMAVVDTGEVYV 228
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG GQLG L + + P RV AL GI ++ VACG H+ LT +G +YAWG +
Sbjct: 229 WGYNGNGQLG---LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 285
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRIHGWG 370
GQLG G N+S+ + + +++ AC +HT + G ++ WG
Sbjct: 286 YGQLGTG----------NKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 113/243 (46%), Gaps = 39/243 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G +P + L +N + +++ACG H+ + SDG
Sbjct: 120 VFTWGHNAYSQLG-NGTTNHGLVPCHISTNL------SNKQVIEVACGSYHSLVLTSDGE 172
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P +V LQ++ V +I+CG C A+ + T
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAV---------VDT 223
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N N P A + +V+CG H + L++ G + AWG
Sbjct: 224 GEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 283
Query: 194 NEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G + + P + E ++I ++ +C H SAA ++ G VY
Sbjct: 284 NSYGQLGTGNKSNQSYPTPVTV-----------EKDRIIEIAACHSTHTSAAKTQGGHVY 332
Query: 251 TWG 253
WG
Sbjct: 333 MWG 335
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 72/154 (46%), Gaps = 19/154 (12%)
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHSCALTSK 301
N E++ G G LG +QS + PRR+ +L+G K +AC G H T++
Sbjct: 64 NDEIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLNG---KKIACLSYGSGPHIVLATTE 117
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
G ++ WG + QLG G T + L+P T N ++ V ACG H+LV
Sbjct: 118 GEVFTWGHNAYSQLGNG--TTNHGLVPCHISTNLSNKQVIEV-------ACGSYHSLVLT 168
Query: 362 RDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 395
DG + WGYN+ GQ + + P V C+
Sbjct: 169 SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCL 202
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 18/150 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G Q P A R +ACG+ HT + +G
Sbjct: 226 VYVWGYNGNGQLGLGNSGNQ--------PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 277
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WGAN +GQLG G + + +P V + ++ +C + T+A
Sbjct: 278 VYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSA--------AKTQGG 329
Query: 143 RLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 330 HVYMWGQCRGQSVILPHLTHFSCTDDVFAC 359
>sp|O95199|RCBT2_HUMAN RCC1 and BTB domain-containing protein 2 OS=Homo sapiens GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 112/227 (49%), Gaps = 22/227 (9%)
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGE 237
H+V + G + WG+N Y QLG G T GL + + +++ +V+CG
Sbjct: 110 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN--------KQVIEVACGS 161
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVV-ALDGIFIKDVACGGVHSC 296
YHS ++ +GEV+ WG + GQ+G S + + +PRRV L + +ACG +
Sbjct: 162 YHSLVLTSDGEVFAWGYNNSGQVGSGSTVN---QPIPRRVTGCLQNKVVVTIACGQMCCM 218
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
A+ G +Y WG + GQLGLG + + R VQ VACG++H
Sbjct: 219 AVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR----------VQRVACGYAH 268
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAA 403
TLV +G+++ WG NSYGQ + YP+PV + ++AA
Sbjct: 269 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA 315
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 131/300 (43%), Gaps = 43/300 (14%)
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA--HCTAAIAEPRENDGTIS 140
+F G N G LG G + P ++ L + + +S G+ H A E
Sbjct: 67 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTE--------- 117
Query: 141 TSRLWVWGQNQGSNFPR---------LFWGAFTPNTIICQVSCGSVHVVALSECGLLQAW 191
++ WG N S N + +V+CGS H + L+ G + AW
Sbjct: 118 -GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAW 176
Query: 192 GYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYT 251
GYN GQ+G G T PR + G + + + ++CG+ AV + GEVY
Sbjct: 177 GYNNSGQVGSGSTVNQ-PIPRRVTG-------CLQNKVVVTIACGQMCCMAVVDTGEVYV 228
Query: 252 WGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQ 311
WG GQLG L + + P RV AL GI ++ VACG H+ LT +G +YAWG +
Sbjct: 229 WGYNGNGQLG---LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 285
Query: 312 AGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHT-LVYMRDGRIHGWG 370
GQLG G N+S+ + + +++ AC +HT + G ++ WG
Sbjct: 286 YGQLGTG----------NKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 113/243 (46%), Gaps = 39/243 (16%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++ WG+N Q G G +P + L +N + +++ACG H+ + SDG
Sbjct: 120 VFTWGHNAYSQLG-NGTTNHGLVPCHISTNL------SNKQVIEVACGSYHSLVLTSDGE 172
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQ-LQSEFVKSISCGAHCTAAIAEPRENDGTIST 141
+F WG N GQ+G G+ + P +V LQ++ V +I+CG C A+ + T
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAV---------VDT 223
Query: 142 SRLWVWGQN--------QGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGY 193
++VWG N N P A + +V+CG H + L++ G + AWG
Sbjct: 224 GEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 283
Query: 194 NEYGQLGRG-ITCEGLQGPRVIKGYAKFLDEAPELEKITQV-SCGEYH-SAAVSENGEVY 250
N YGQLG G + + P + E ++I ++ +C H SAA ++ G VY
Sbjct: 284 NSYGQLGTGNKSNQSYPTPVTV-----------EKDRIIEIAACHSTHTSAAKTQGGHVY 332
Query: 251 TWG 253
WG
Sbjct: 333 MWG 335
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 72/154 (46%), Gaps = 19/154 (12%)
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC----GGVHSCALTSK 301
N E++ G G LG +QS + PRR+ +L+G K +AC G H T++
Sbjct: 64 NDEIFVLGTNCCGCLGLGDVQS---TIEPRRLDSLNG---KKIACLSYGSGPHIVLATTE 117
Query: 302 GALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYM 361
G ++ WG + QLG G T + L+P T N ++ V ACG H+LV
Sbjct: 118 GEVFTWGHNAYSQLGNG--TTNHGLVPCHISTNLSNKQVIEV-------ACGSYHSLVLT 168
Query: 362 RDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV 395
DG + WGYN+ GQ + + P V C+
Sbjct: 169 SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCL 202
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 18/150 (12%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
+YVWGYN +GQ G Q P A R +ACG+ HT + +G
Sbjct: 226 VYVWGYNGNGQLGLGNSGNQ--------PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 277
Query: 83 LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTS 142
++ WGAN +GQLG G + + +P V + ++ +C + T+A
Sbjct: 278 VYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSA--------AKTQGG 329
Query: 143 RLWVWGQNQGSN--FPRLFWGAFTPNTIIC 170
+++WGQ +G + P L + T + C
Sbjct: 330 HVYMWGQCRGQSVILPHLTHFSCTDDVFAC 359
>sp|Q3MHW0|SRGEF_BOVIN Secretion-regulating guanine nucleotide exchange factor OS=Bos
taurus GN=SERGEF PE=2 SV=1
Length = 464
Score = 105 bits (262), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 128/478 (26%), Positives = 188/478 (39%), Gaps = 47/478 (9%)
Query: 15 DNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHT 74
+ +P +A++ WG N GQ G +E L +QL C +G R I G H+
Sbjct: 9 EAVPTAAALFAWGANSYGQLGLGHKEDVLSA-QQLSDF---CKSGCIKR---ITGGGGHS 61
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
A V +G+LF G N+ GQLG G E + K L ++ ++CG T + E
Sbjct: 62 AVVTDEGSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGWDFTIILTE--- 118
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI------ICQVSCGSVHVVALSECGLL 188
+G + + +GQ + PR P I + ++ G H +A + G +
Sbjct: 119 -NGQVLSCGSNSFGQLGVPHGPRR---CVIPQAIELLREKVVSIAAGLRHALAATASGTV 174
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
WG GR + C G P + E + V G HSA++++ GE
Sbjct: 175 FQWGTG-LASSGRRL-CPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDAGE 232
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVA--LDGIFIKDVACGGVHSCALTSKGALYA 306
+Y WG GQL LLP+R+ A I V G H A T G ++
Sbjct: 233 LYVWGSNKHGQLA----SQAAFLLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGKVFT 288
Query: 307 WGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN------GVQLVACGHSHTLVY 360
WG + GQLG +TR + + + P P+ G ++CG H L
Sbjct: 289 WGRADYGQLGRTVETREGWESEKQDPSLPGSGPQKGTPSCLPCLTGATEISCGSEHNLAV 348
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVD---WCVGEVRKLAAGGGHSAVLADACSL 417
+ G H WG+N +G + W P PV + +G + G GHS L C L
Sbjct: 349 I-GGVCHSWGWNEHGMCGDGTEADVWAPKPVPGLRFFLG--LHVGCGAGHSLAL---CQL 402
Query: 418 KELCEFRLAESVTLSNASEIEDVASRTGSEALARLCERLREHSLHGDEFDCDDDTRNG 475
L SVT + ++ S+ E ER E S D RNG
Sbjct: 403 PALPALGQHPSVTSPSPDATKEARSQEAMEQERNQKERHAETSPQAQ----SDRFRNG 456
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 66/140 (47%), Gaps = 14/140 (10%)
Query: 238 YHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL-DGIFIKDVACGGVHSC 296
+ S AV ++ WG S GQLG L + L +++ IK + GG HS
Sbjct: 6 HSSEAVPTAAALFAWGANSYGQLG---LGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSA 62
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
+T +G+L+ G ++ GQLGLG P +S ++ +Q VACG
Sbjct: 63 VVTDEGSLFVCGLNKDGQLGLGHTEEVLYFTPCKS----------LLGCAIQQVACGWDF 112
Query: 357 TLVYMRDGRIHGWGYNSYGQ 376
T++ +G++ G NS+GQ
Sbjct: 113 TIILTENGQVLSCGSNSFGQ 132
>sp|Q80YD6|SRGEF_MOUSE Secretion-regulating guanine nucleotide exchange factor OS=Mus
musculus GN=Sergef PE=2 SV=2
Length = 464
Score = 99.8 bits (247), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 172/415 (41%), Gaps = 46/415 (11%)
Query: 15 DNIPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHT 74
+ + A + ++ WG N GQ G G + + +P+QL C AG + G H+
Sbjct: 9 ETVSAAAVLFAWGANSYGQLGL-GHKEDVFLPQQLSDF---CQAGCIK---SVTGGGGHS 61
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
A V G LF G N+ GQLG G E K L+ ++ ++CG T + E
Sbjct: 62 AVVTDGGDLFVCGLNKDGQLGLGHTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTE--- 118
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQ------VSCGSVHVVALSECGLL 188
G + + +GQ + PR P I C V+ G H +A + G +
Sbjct: 119 -KGQVLSCGSNAFGQLGVPHGPR---KCVVPQAIECLREKVVCVAAGLRHALATTATGSV 174
Query: 189 QAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSC--GEYHSAAVSEN 246
WG GR + C G P + AK LE T V G HSA++++
Sbjct: 175 FQWGTG-LASSGRRL-CPGQNLPLFLT--AKEPSRVTGLENSTAVCAVAGSDHSASLTDT 230
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVA--LDGIFIKDVACGGVHSCALTSKGAL 304
GE+Y WG GQL ++ LP+R+ A + V G H A T G +
Sbjct: 231 GELYVWGRNKHGQLASRAV----FLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKV 286
Query: 305 YAWGGSQAGQLG--LGPQTRSFSLIPNESDTYFRNIPILVVPN------GVQLVACGHSH 356
+ WG + GQLG L P + + +S F+ P VP+ G ++CG H
Sbjct: 287 FTWGRADYGQLGRRLEP-PEAQKPVEQDSSLAFQG-PQNSVPSPLHCLTGATEISCGSEH 344
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKL---AAGGGHS 408
L +RD + WG+N +G + + W P+PV +L G GHS
Sbjct: 345 NLAVIRD-KCCSWGWNEHGMCGDGTESNVWTPTPVQALPPSPSRLLLVGCGAGHS 398
Score = 89.7 bits (221), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 161/372 (43%), Gaps = 78/372 (20%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGT 82
++V G N GQ G E LR P L GCP +ACG + T + G
Sbjct: 70 LFVCGLNKDGQLGLGHTEEVLRFTICKP--LRGCPI------RQVACGWDFTIMLTEKGQ 121
Query: 83 LFTWGANEFGQLGDGTEEGRKH---PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTI 139
+ + G+N FGQLG G + P+ ++ L+ + V C AA R T
Sbjct: 122 VLSCGSNAFGQLG--VPHGPRKCVVPQAIECLREKVV--------CVAAGL--RHALATT 169
Query: 140 STSRLWVWGQN---------QGSNFPRLFWGAFTPN--------TIICQVSCGSVHVVAL 182
+T ++ WG G N P LF A P+ T +C V+ GS H +L
Sbjct: 170 ATGSVFQWGTGLASSGRRLCPGQNLP-LFLTAKEPSRVTGLENSTAVCAVA-GSDHSASL 227
Query: 183 SECGLLQAWGYNEYGQLG-RGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
++ G L WG N++GQL R + L P+ I+ + F DE K+T V G H
Sbjct: 228 TDTGELYVWGRNKHGQLASRAVF---LPLPQRIEAH-YFQDE-----KVTAVWSGWTHLV 278
Query: 242 AVSENGEVYTWGLGSVGQLGH--------------CSLQ-SGDKELLPRRVVALDGIFIK 286
A +E G+V+TWG GQLG SL G + +P + L G
Sbjct: 279 AKTETGKVFTWGRADYGQLGRRLEPPEAQKPVEQDSSLAFQGPQNSVPSPLHCLTG--AT 336
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
+++CG H+ A+ + +WG ++ G G G ++ ++ P ++ + P+
Sbjct: 337 EISCGSEHNLAVI-RDKCCSWGWNEHGMCGDGTESNVWTPTPVQA--------LPPSPSR 387
Query: 347 VQLVACGHSHTL 358
+ LV CG H+L
Sbjct: 388 LLLVGCGAGHSL 399
Score = 86.3 bits (212), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 162/384 (42%), Gaps = 71/384 (18%)
Query: 68 ACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQL-QSEFVKSISCGAHCT 126
+C E +A A LF WGAN +GQLG G +E P+++ Q+ +KS++ G +
Sbjct: 5 SCASETVSAAA---VLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHS 61
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQ------GSNFPRLFWGAFTP--NTIICQVSCGSVH 178
A + DG L+V G N+ G L + P I QV+CG
Sbjct: 62 AVV-----TDG----GDLFVCGLNKDGQLGLGHTEEVLRFTICKPLRGCPIRQVACGWDF 112
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPR--VIKGYAKFLDEAPELEKITQVSCG 236
+ L+E G + + G N +GQLG GPR V+ + L EK+ V+ G
Sbjct: 113 TIMLTEKGQVLSCGSNAFGQLGVP------HGPRKCVVPQAIECLR-----EKVVCVAAG 161
Query: 237 EYHSAAVSENGEVYTW--GLGSVGQLGHCSLQSGDKELL---PRRVVALDGIFIKDVACG 291
H+ A + G V+ W GL S G+ C Q+ L P RV L+ G
Sbjct: 162 LRHALATTATGSVFQWGTGLASSGRR-LCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAG 220
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDT-YFRNIPILVVPNGVQLV 350
HS +LT G LY WG ++ GQL F +P + YF++ V V
Sbjct: 221 SDHSASLTDTGELYVWGRNKHGQLA---SRAVFLPLPQRIEAHYFQD-------EKVTAV 270
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQ------------AANEKSTYAW------YPSPVD 392
G +H + G++ WG YGQ + S+ A+ PSP+
Sbjct: 271 WSGWTHLVAKTETGKVFTWGRADYGQLGRRLEPPEAQKPVEQDSSLAFQGPQNSVPSPLH 330
Query: 393 WCVGEVRKLAAGGGHS-AVLADAC 415
C+ +++ G H+ AV+ D C
Sbjct: 331 -CLTGATEISCGSEHNLAVIRDKC 353
>sp|Q5DX34|RPGRH_CAEEL X-linked retinitis pigmentosa GTPase regulator homolog
OS=Caenorhabditis elegans GN=glo-4 PE=1 SV=1
Length = 1392
Score = 99.8 bits (247), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 151/383 (39%), Gaps = 94/383 (24%)
Query: 47 KQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPE 106
+Q P + P G R IACG EH ++S G L WG N FGQ G G H
Sbjct: 764 EQHLPRVLEYPGG---RPRAIACGAEHILVLSSSGQLSAWGGNRFGQCGVG------HSF 814
Query: 107 KVKQLQS-----EFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQ-------NQGSN 154
++ L ++ I+CG +A I +DG++ T VWGQ N
Sbjct: 815 RIANLHQVDGDWPAIEKIACGQFHSAFIC----SDGSLWTFGWGVWGQLGHGGRNNSNQL 870
Query: 155 FPRLFWGAFTPNTIIC---QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGP 211
P N +IC Q++CG H V L++ G + G YGQ+G
Sbjct: 871 VPTRV------NGLICKVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDD------- 917
Query: 212 RVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWG---------LGSVGQLGH 262
IK F ++ ++ YHS ++E+ V+ WG + + ++
Sbjct: 918 --IKKVFAFTPLPLGPLRVRDIATHYYHSICITEDNRVFEWGRNPQELKMRMFVMKKIRS 975
Query: 263 CSLQSGD-------------------------KELLPRRVVA--LDGIFIKDVACGGVHS 295
L++ + +E L R V LDG + VACG HS
Sbjct: 976 AQLKNTEDPSSPSPSTNGSTPRVNLNLPAEIPREDLGLREVKHFLDGNIVS-VACGLSHS 1034
Query: 296 CALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACG 353
+TS+G LY WG QLG G + E F PNG + V+ G
Sbjct: 1035 ALITSEGTLYTWGKGLDYQLGHGNKNERM-----EPHQVFE-------PNGAKWVNVSLG 1082
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQ 376
++HT+ DG + WG N +GQ
Sbjct: 1083 NNHTIASTDDGSVFAWGKNDFGQ 1105
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 124/297 (41%), Gaps = 66/297 (22%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKH--PEKVKQLQSEFVKSISCGAH 124
IACG H+A + SDG+L+T+G +GQLG G P +V L + V I+CG
Sbjct: 832 IACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLICK-VTQIACGRA 890
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQ------GSNFPRLFWGAFTPNTI----ICQVSC 174
T + + T R+ V G + ++F AFTP + + ++
Sbjct: 891 HTVVLTD---------TGRVLVCGSGSYGQMGVDDDIKKVF--AFTPLPLGPLRVRDIAT 939
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQG--------------------PRV- 213
H + ++E + WG N R + ++ PRV
Sbjct: 940 HYYHSICITEDNRVFEWGRNPQELKMRMFVMKKIRSAQLKNTEDPSSPSPSTNGSTPRVN 999
Query: 214 -------------IKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQL 260
++ FLD I V+CG HSA ++ G +YTWG G QL
Sbjct: 1000 LNLPAEIPREDLGLREVKHFLDG-----NIVSVACGLSHSALITSEGTLYTWGKGLDYQL 1054
Query: 261 GHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL 317
GH + ++ + P +V +G +V+ G H+ A T G+++AWG + GQ G+
Sbjct: 1055 GH---GNKNERMEPHQVFEPNGAKWVNVSLGNNHTIASTDDGSVFAWGKNDFGQCGV 1108
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 83/186 (44%), Gaps = 22/186 (11%)
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQ--LGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
++CG H +S +G++ WG GQ +GH + + V D I+ +AC
Sbjct: 781 IACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFRIANLHQ------VDGDWPAIEKIAC 834
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
G HS + S G+L+ +G GQLG G + S L+P + V +
Sbjct: 835 GQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLI---------CKVTQI 885
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQAANE---KSTYAWYPSPVDWCVGEVRKLAAGGGH 407
ACG +HT+V GR+ G SYGQ + K +A+ P P+ VR +A H
Sbjct: 886 ACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPL--RVRDIATHYYH 943
Query: 408 SAVLAD 413
S + +
Sbjct: 944 SICITE 949
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 14/144 (9%)
Query: 273 LPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESD 332
LPR V+ G + +ACG H L+S G L AWGG++ GQ G+G R +L + D
Sbjct: 767 LPR-VLEYPGGRPRAIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFRIANLHQVDGD 825
Query: 333 TYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAAN--EKSTYAWYPSP 390
++ +ACG H+ DG + +G+ +GQ + ++ P+
Sbjct: 826 W-----------PAIEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTR 874
Query: 391 VDWCVGEVRKLAAGGGHSAVLADA 414
V+ + +V ++A G H+ VL D
Sbjct: 875 VNGLICKVTQIACGRAHTVVLTDT 898
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I ++ +Y WG Q G + ++ P ++F P GA +W++++ G+ HT A
Sbjct: 1037 ITSEGTLYTWGKGLDYQLGHGNKNERME-----PHQVFE-PNGA--KWVNVSLGNNHTIA 1088
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQL 111
DG++F WG N+FGQ G T++ + K+
Sbjct: 1089 STDDGSVFAWGKNDFGQCGVLTKKNGNSADVTKKF 1123
Score = 52.4 bits (124), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 106/290 (36%), Gaps = 63/290 (21%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
+++ +G+ GQ G GR QL P G + IACG HT + G
Sbjct: 847 SLWTFGWGVWGQLGHGGRNNS----NQLVPTRVN---GLICKVTQIACGRAHTVVLTDTG 899
Query: 82 TLFTWGANEFGQLGDG--------------------------------TEEGR-----KH 104
+ G+ +GQ+G TE+ R ++
Sbjct: 900 RVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLRVRDIATHYYHSICITEDNRVFEWGRN 959
Query: 105 PEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGA-- 162
P+++K K S T + P + ST R+ N + PR G
Sbjct: 960 PQELKMRMFVMKKIRSAQLKNTEDPSSPSPSTNG-STPRV---NLNLPAEIPREDLGLRE 1015
Query: 163 ---FTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAK 219
F I+ V+CG H ++ G L WG QLG G E ++ +V +
Sbjct: 1016 VKHFLDGNIV-SVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVFE---- 1070
Query: 220 FLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGD 269
P K VS G H+ A +++G V+ WG GQ G + ++G+
Sbjct: 1071 -----PNGAKWVNVSLGNNHTIASTDDGSVFAWGKNDFGQCGVLTKKNGN 1115
>sp|Q6NYE2|RCC2_DANRE Protein RCC2 homolog OS=Danio rerio GN=rcc2 PE=2 SV=1
Length = 495
Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 113/453 (24%), Positives = 190/453 (41%), Gaps = 85/453 (18%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLP-----PELFGCPAGANSRWLDIACGHEH 73
K + ++G + GRK +Q + L P +GC + + H
Sbjct: 75 VKGQLLIFGATNWDLIGRKEVPKQQAAFRNLGQNLWGPHRYGCLSDVQVSCVVSGPCAAH 134
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
+ + ++G L++WG N+ GQLG G + + P+ ++ L E + + +CG + T A+ E
Sbjct: 135 SLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTE-- 192
Query: 134 ENDGTIST---SRLWVWGQNQGSNFPRLFWGAFTPNTI------ICQVSCGSVHVVALSE 184
+GT+ T ++L GQ ++ +P TI I +V+CG+ + +
Sbjct: 193 --NGTVYTFGENKLGQLGQGNQTD------AVLSPATIQYNGQPIVKVACGAEFSMIVDC 244
Query: 185 CGLLQAWGYNEYGQLGRG-------------ITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
G L ++G EYGQLG CE + PR + A F+++ + + +
Sbjct: 245 KGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELI--PRRV---AIFIEKTKDGQVLP 299
Query: 232 -------QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD--G 282
V+CG H+ + V++WG G G+LGH + E++PR V D G
Sbjct: 300 VPNVVARDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD---EMVPRLVKLFDFPG 356
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILV 342
+ CG S AL+ G L+ WG + + ES Y + + L
Sbjct: 357 RGATQIYCGYQCSFALSEMGGLFFWGVTNTSR---------------ESTMYPKAVQDLC 401
Query: 343 VPNGVQLVACGHSHTLVYMRDGRIHGWGYNS------YGQAANEKSTYAWYPSPVDWCVG 396
++ +ACG S +V D I WG + YG + ST A +D
Sbjct: 402 GWK-IRSLACGKSSIIVAADDSTI-SWGPSPTFGELGYGDNKPKSSTTAQEVKTLDGVYS 459
Query: 397 EVRKLAAGGGHSAVLA------DACSLKELCEF 423
E ++ G HS V+A + LK+L E+
Sbjct: 460 E--QVVMGYSHSLVIARQDTEQEKEKLKKLPEY 490
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 155/373 (41%), Gaps = 63/373 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I + ++ WG N GQ G G ++L PK + E G + ACG HT A
Sbjct: 138 ITTEGKLWSWGRNDKGQLGH-GDTKRLEAPKLI--EGLG-----EEVIVAAACGRNHTLA 189
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ +GT++T+G N+ GQLG G + Q + + ++CGA + I + + N
Sbjct: 190 LTENGTVYTFGENKLGQLGQGNQTDAVLSPATIQYNGQPIVKVACGAEFS-MIVDCKGNL 248
Query: 137 GTISTSRLWVWGQNQGSNF--------------PR---LFWGAF-------TPNTIICQV 172
+ G N F PR +F PN + V
Sbjct: 249 YSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVARDV 308
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
+CG+ H + L + +WG+ YG+LG + + PR++K L + P TQ
Sbjct: 309 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMV-PRLVK-----LFDFPG-RGATQ 361
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
+ CG S A+SE G ++ WG+ + S + + P+ V L G I+ +ACG
Sbjct: 362 IYCGYQCSFALSEMGGLFFWGVTNT---------SRESTMYPKAVQDLCGWKIRSLACGK 412
Query: 293 VHSCALTSKGALYAWGGSQA-GQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV--QL 349
S + + + +WG S G+LG G S E T +GV +
Sbjct: 413 -SSIIVAADDSTISWGPSPTFGELGYGDNKPKSSTTAQEVKTL----------DGVYSEQ 461
Query: 350 VACGHSHTLVYMR 362
V G+SH+LV R
Sbjct: 462 VVMGYSHSLVIAR 474
>sp|Q7ZZC8|NEK9_XENLA Serine/threonine-protein kinase Nek9 OS=Xenopus laevis GN=nek9 PE=2
SV=1
Length = 944
Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 109/438 (24%), Positives = 180/438 (41%), Gaps = 81/438 (18%)
Query: 10 TARPVDNIPAKSA-IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIA 68
T P+ + ++S+ +YVWG G K ++L + K G +R +
Sbjct: 317 TEAPIAVVTSRSSEVYVWG-------GGKTTPQKLDVFK----------GGWRAR--QVC 357
Query: 69 CGHEHTAAVASDGTLFTW-----GANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA 123
G H A V + L+TW G+ GQLG G + P+ V++LQ + V+ +SCG+
Sbjct: 358 AGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPKHVEKLQGKSVQKVSCGS 417
Query: 124 HCTAAIAEPRENDGTISTSRLWVWG-----QNQGSNFPRLFWGAFTPNTIICQVSCGSVH 178
T I + +G + + +G Q+ GS F N + QVSCG H
Sbjct: 418 DFTVCITD----EGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDSH 473
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK---ITQVSC 235
++AL+ + +WG EYG+LG + + + P+ + E+++ I V C
Sbjct: 474 IMALTRSKSVYSWGCGEYGRLGLD-SEDDVYSPQKV-----------EVQRGLCIVNVCC 521
Query: 236 GEYHSAAVSENGEVYTWGLGSVGQLG----------HCSLQSGDKELLPRRVVALDGIFI 285
G S ++ G+V GL +LG H + Q L I
Sbjct: 522 GSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKI 581
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
+ ++ G H+ A+ +G L +G ++ GQLG+G + I +L P
Sbjct: 582 RSISPGRTHTAAIDERGRLLTFGSNKCGQLGVGDYRKHL------------GINLLGGPL 629
Query: 346 G---VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA---NEK----STYAWYPSPVDWCV 395
G V V+CG T D I WG G+ A NE+ +P P+ +
Sbjct: 630 GGKQVIRVSCGDEFTTAATADNHIFAWGNGGNGRLAMTPNERPQGSDICTSWPRPIFGSL 689
Query: 396 GEVRKLAAGGGHSAVLAD 413
V L+ G H+ ++ +
Sbjct: 690 HHVTDLSCRGWHTILIVE 707
>sp|Q8TD19|NEK9_HUMAN Serine/threonine-protein kinase Nek9 OS=Homo sapiens GN=NEK9 PE=1
SV=2
Length = 979
Score = 95.1 bits (235), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 174/440 (39%), Gaps = 85/440 (19%)
Query: 10 TARPVDNIPAK-SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIA 68
T P+ + ++ S +YVWG G K ++L + K GC A +
Sbjct: 335 TEAPIAVVTSRTSEVYVWG-------GGKSTPQKLDVIKS------GCSAR------QVC 375
Query: 69 CGHEHTAAVASDGTLFTW-----GANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA 123
G+ H A V + L+TW G GQLG G + + P+ V++LQ + ++ +SCG
Sbjct: 376 AGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGD 435
Query: 124 HCTAAIAEPRENDGTISTSRLWVWGQN----------QGSNFPRLFWGAFTPNTIICQVS 173
T + + +L+ +G + G F + + QVS
Sbjct: 436 DFTVCVTD---------EGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLSNPVEQVS 486
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
CG HVV L+ + +WG EYG+LG + E P+ + + P+ I V
Sbjct: 487 CGDNHVVVLTRNKEVYSWGCGEYGRLGLD-SEEDYYTPQKV--------DVPKALIIVAV 537
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF--------- 284
CG + ++++G+V GL +LG SG V F
Sbjct: 538 QCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFY 597
Query: 285 -IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
I+ +A G H+ A+ +G L +G ++ GQLG+G + I +L
Sbjct: 598 KIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRL------------GINLLGG 645
Query: 344 PNG---VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTY-------AWYPSPVDW 393
P G V V+CG T+ D I WG G+ A + +P P+
Sbjct: 646 PLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFG 705
Query: 394 CVGEVRKLAAGGGHSAVLAD 413
+ V L+ G H+ ++ +
Sbjct: 706 SLHHVPDLSCRGWHTILIVE 725
>sp|Q8K1R7|NEK9_MOUSE Serine/threonine-protein kinase Nek9 OS=Mus musculus GN=Nek9 PE=1
SV=2
Length = 984
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 171/440 (38%), Gaps = 85/440 (19%)
Query: 10 TARPVDNIPAK-SAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIA 68
T P+ + ++ S +YVWG G K ++L + K GC A +
Sbjct: 335 TEAPIAVVTSRTSEVYVWG-------GGKSTPQKLDVIKS------GCSAR------QVC 375
Query: 69 CGHEHTAAVASDGTLFTW-----GANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA 123
G+ H A V + L+TW G GQLG G + + P+ V++LQ + + +SCG
Sbjct: 376 AGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGD 435
Query: 124 HCTAAIAEPRENDGTISTSRLWVWGQN----------QGSNFPRLFWGAFTPNTIICQVS 173
T + + +L+ +G + G F + + QVS
Sbjct: 436 DFTVCVTD---------EGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVS 486
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
CG HVV L+ + +WG EYG+LG + RV + P+ I V
Sbjct: 487 CGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRV---------DVPKALIIVAV 537
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF--------- 284
CG + ++++G+V GL +LG SG V F
Sbjct: 538 QCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFY 597
Query: 285 -IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
I+ +A G H+ A+ +G L +G ++ GQLG+G + I +L
Sbjct: 598 KIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRL------------GINLLGG 645
Query: 344 PNG---VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTY-------AWYPSPVDW 393
P G V V+CG T+ D I WG G+ A + +P P+
Sbjct: 646 PLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFG 705
Query: 394 CVGEVRKLAAGGGHSAVLAD 413
+ V L+ G H+ ++ +
Sbjct: 706 SLHHVPDLSCRGWHTILIVE 725
>sp|Q9P258|RCC2_HUMAN Protein RCC2 OS=Homo sapiens GN=RCC2 PE=1 SV=2
Length = 522
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 107/432 (24%), Positives = 181/432 (41%), Gaps = 73/432 (16%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLP-----PELFGCPAGANSRWLDIACGHEHT 74
K + ++G + GRK +Q + L P +GC AG R + H+
Sbjct: 103 KGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAAHS 162
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
+ ++G L++WG NE GQLG G + + P ++ L E + S +CG + T A+ E
Sbjct: 163 LLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTE--- 219
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGAFT-----PNTI------ICQVSCGSVHVVALS 183
T ++ +G+N+ +L G T P I I +++CG+ + +
Sbjct: 220 ------TGSVFAFGENK---MGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMIMD 270
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVI--------KGYAKFLDEAPELE------- 228
G L ++G EYGQLG + + + I + A F+++ + +
Sbjct: 271 CKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNV 330
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD--GIFIK 286
+ V+CG H+ + V++WG G G+LGH + E++PR V D G
Sbjct: 331 VVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD---EMVPRLVKLFDFPGRGAS 387
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
+ G S A++ G L+ WG + + ES Y + + L
Sbjct: 388 QIYAGYTCSFAVSEVGGLFFWGATNTSR---------------ESTMYPKAVQDLCGWR- 431
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNS------YGQAANEKSTYAWYPSPVDWCVGEVRK 400
++ +ACG S +V + I WG + YG + ST A +D E +
Sbjct: 432 IRSLACGKSSIIVAADESTIS-WGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSE--Q 488
Query: 401 LAAGGGHSAVLA 412
+A G HS V+A
Sbjct: 489 VAMGYSHSLVIA 500
Score = 82.4 bits (202), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 153/374 (40%), Gaps = 63/374 (16%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I + ++ WG N GQ G G +++ P+ + ++ + ACG HT A
Sbjct: 165 ITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIE-------GLSHEVIVSAACGRNHTLA 216
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+ G++F +G N+ GQLG G + + + ++CGA + I + + N
Sbjct: 217 LTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSM-IMDCKGNL 275
Query: 137 GTISTSRLWVWGQNQGSNF--------------PR---LFWGAF-------TPNTIICQV 172
+ G N F PR +F PN ++ V
Sbjct: 276 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 335
Query: 173 SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQ 232
+CG+ H + L + +WG+ YG+LG + + PR++K L + P +Q
Sbjct: 336 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMV-PRLVK-----LFDFPG-RGASQ 388
Query: 233 VSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGG 292
+ G S AVSE G ++ WG + S + + P+ V L G I+ +ACG
Sbjct: 389 IYAGYTCSFAVSEVGGLFFWGATNT---------SRESTMYPKAVQDLCGWRIRSLACGK 439
Query: 293 VHSCALTSKGALYAWGGSQA-GQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV--QL 349
S + + + +WG S G+LG G S E T +G+ +
Sbjct: 440 -SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTL----------DGIFSEQ 488
Query: 350 VACGHSHTLVYMRD 363
VA G+SH+LV RD
Sbjct: 489 VAMGYSHSLVIARD 502
>sp|Q9UGK8|SRGEF_HUMAN Secretion-regulating guanine nucleotide exchange factor OS=Homo
sapiens GN=SERGEF PE=1 SV=2
Length = 458
Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 120/462 (25%), Positives = 175/462 (37%), Gaps = 43/462 (9%)
Query: 29 NHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGA 88
N GQ G G + + +P+QL F P I G H+A V G LF G
Sbjct: 23 NSYGQLGL-GHKEDVLLPQQL--NDFCKPRSVRR----ITGGGGHSAVVTDGGDLFVCGL 75
Query: 89 NEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWG 148
N+ GQLG G E + K L ++ ++CG T + E +G + + +G
Sbjct: 76 NKDGQLGLGHTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTE----NGQVLSCGSNSFG 131
Query: 149 QNQGSNFPRLFWGAFTPNTI------ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRG 202
Q + PR P I + ++ G H VA + G++ WG GR
Sbjct: 132 QLGVPHGPRR---CVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQWGTG-LASCGRR 187
Query: 203 ITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
+ C G P E K V G HSA++++ GEVY WG GQL +
Sbjct: 188 L-CPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLAN 246
Query: 263 CSLQSGDKELLPRRVVA--LDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQ 320
+P+++ A + + G H A T G ++ WG + GQLG +
Sbjct: 247 ----EAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLE 302
Query: 321 TRSFSLIPNESDTYFRNIPILVVPN------GVQLVACGHSHTLVYMRDGRIHGWGYNSY 374
T + + + P +P+ G V+CG H L + G + WG+N +
Sbjct: 303 TYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTGATEVSCGSEHNLAII-GGVCYSWGWNEH 361
Query: 375 GQAANEKSTYAWYPSPVDWCVGEVRKLAA-GGGHSAVLADACSLKELCEFRLAESVTLSN 433
G + W P PV + L G GHS L C L VT +
Sbjct: 362 GMCGDGTEANVWAPKPVQALLSSSGLLVGCGAGHSLAL---CQLPAHPALVQDPKVTYLS 418
Query: 434 ASEIEDVASRTGSEALARLCERLREHSLHGDEFDCDDDTRNG 475
IED S+ + ER E S D +RNG
Sbjct: 419 PDAIEDTESQKAMDKERNWKERQSETSTQSQ----SDWSRNG 456
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 9/117 (7%)
Query: 23 IYVWGYNHSGQTGRK-------GRERQLR-IPKQLPPELFGCPAGANSRWLDIACGHEHT 74
++ WG GQ GRK E+Q +P PP + +++CG EH
Sbjct: 286 MFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTGATEVSCGSEHN 345
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
A+ G ++WG NE G GDGTE P+ V+ L S + CGA + A+ +
Sbjct: 346 LAIIG-GVCYSWGWNEHGMCGDGTEANVWAPKPVQALLSSSGLLVGCGAGHSLALCQ 401
>sp|P18754|RCC1_HUMAN Regulator of chromosome condensation OS=Homo sapiens GN=RCC1 PE=1
SV=1
Length = 421
Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 117/455 (25%), Positives = 187/455 (41%), Gaps = 83/455 (18%)
Query: 1 MDINEIIGETARPVDNIPAKSAIYVWGYNHSGQTGR-----KGRERQL----RIPKQLPP 51
M I + P D IP + V +HS + G +G QL + ++ P
Sbjct: 1 MSPKRIAKRRSPPADAIPKSKKVKVSHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKP 60
Query: 52 ELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLG-DGTEEGRKHPEKVKQ 110
L P + G HT ++ G ++++G N+ G LG D + EG + +
Sbjct: 61 ALVSIPEDV----VQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE 116
Query: 111 LQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSN----FPRLFWGAFTPN 166
LQ + V+ +S G TAA+ +DG R+++WG + +N + P
Sbjct: 117 LQEKVVQ-VSAGDSHTAALT----DDG-----RVFLWGSFRDNNGVIGLLEPMKKSMVPV 166
Query: 167 TI-----ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITC----------EGLQGP 211
+ + +V+ G+ H+V L+ G L G E GQLGR E L P
Sbjct: 167 QVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVP 226
Query: 212 RVI-------KGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCS 264
+ + +G+ +F D CG Y + A+S G VY +GL + QLG
Sbjct: 227 KCVMLKSRGSRGHVRFQD----------AFCGAYFTFAISHEGHVYGFGLSNYHQLGTPG 276
Query: 265 LQSGDKELLPRRVVALDGIFIKDVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQTR 322
+S +P+ + + V G H+ + S+G Y+ G ++ G+LGLG
Sbjct: 277 TESC---FIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAE 333
Query: 323 SFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKS 382
S IP T +P V VACG S +DGR+ WG + Q +
Sbjct: 334 EKS-IP----TLISRLP------AVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQD 382
Query: 383 TYAWYPSPVDWCVGE-----VRKLAAGGGHSAVLA 412
AW SPV+ + V +++GG H+ +L
Sbjct: 383 EDAW--SPVEMMGKQLENRVVLSVSSGGQHTVLLV 415
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 120/263 (45%), Gaps = 37/263 (14%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ Q G +H V LS+ G + ++G N+ G LGR + EG + ++ G + E
Sbjct: 69 VVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSE---MVPGKVELQ------E 119
Query: 229 KITQVSCGEYHSAAVSENGEVYTWG--LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
K+ QVS G+ H+AA++++G V+ WG + G +G L+ K ++P + V LD +K
Sbjct: 120 KVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIG--LLEPMKKSMVPVQ-VQLDVPVVK 176
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
VA G H LT+ G LY G + GQLG P+ L N + + L+VP
Sbjct: 177 -VASGNDHLVMLTADGDLYTLGCGEQGQLGRVPE-----LFANRGGR--QGLERLLVPKC 228
Query: 347 VQLVA-------------CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDW 393
V L + CG T +G ++G+G ++Y Q + + P +
Sbjct: 229 VMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTS 288
Query: 394 CVGEVRKLA--AGGGHSAVLADA 414
+ +GG H V D+
Sbjct: 289 FKNSTKSWVGFSGGQHHTVCMDS 311
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 47 KQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPE 106
K +P + PA ++ +ACG AV DG +F WG QLG G +E P
Sbjct: 335 KSIPTLISRLPAVSS-----VACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPV 389
Query: 107 KV--KQLQSEFVKSISCGAHCTAAIAEPREN 135
++ KQL++ V S+S G T + + +E
Sbjct: 390 EMMGKQLENRVVLSVSSGGQHTVLLVKDKEQ 420
>sp|Q4R828|RCCD1_MACFA RCC1 domain-containing protein 1 OS=Macaca fascicularis GN=RCCD1
PE=2 SV=1
Length = 376
Score = 92.0 bits (227), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 32/208 (15%)
Query: 224 APELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
APEL + Q+ G H+ + G+V++WG G GQLGH +L++ EL PR + AL G+
Sbjct: 155 APEL-RARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEA---ELEPRLLEALQGL 210
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL----------------------GPQT 321
+ +VA GG HS ++ G +Y WG +++GQL L G Q
Sbjct: 211 TMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATGLNEDGSQV 270
Query: 322 RSFSLIPNESDTYF---RNIPILV-VPNGVQLV--ACGHSHTLVYMRDGRIHGWGYNSYG 375
+ + + + F + P L+ +P G V +CG HT V R G ++ WG+ YG
Sbjct: 271 KRTGRVEDGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGELYTWGWGKYG 330
Query: 376 QAANEKSTYAWYPSPVDWCVGEVRKLAA 403
Q +E +T +P V++ V + ++ A
Sbjct: 331 QLGHEDTTSLDWPRRVEYFVDKQLQVKA 358
Score = 82.8 bits (203), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 107/247 (43%), Gaps = 37/247 (14%)
Query: 50 PPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK 109
PP F P R + G EH + + G +F+WG GQLG GT E P ++
Sbjct: 148 PP--FYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLE 205
Query: 110 QLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTII 169
LQ + ++ G + ++E T +++WG N+
Sbjct: 206 ALQGLTMAEVAAGGWHSVCVSE---------TGDIYIWGWNESG---------------- 240
Query: 170 CQVSCGSVHVVALSECGLLQAWGYNEYG-QLGR-GITCEGLQGPRV-IKGYAKFLDEAPE 226
Q++ + ++ E +A G NE G Q+ R G +G P + ++ + LD P
Sbjct: 241 -QLALPTRNLAEDGETVAREATGLNEDGSQVKRTGRVEDGAPAPFIAVQPFPALLD-LPL 298
Query: 227 LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL--DGIF 284
+VSCG H+A V+ GE+YTWG G GQLGH S D PRRV +
Sbjct: 299 GSDAVKVSCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLD---WPRRVEYFVDKQLQ 355
Query: 285 IKDVACG 291
+K V CG
Sbjct: 356 VKAVTCG 362
>sp|Q8BTU7|RCCD1_MOUSE RCC1 domain-containing protein 1 OS=Mus musculus GN=Rccd1 PE=2 SV=2
Length = 377
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 107/218 (49%), Gaps = 33/218 (15%)
Query: 224 APELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
APEL ++ Q+ G H + G+V++WG G GQLGH +L++ EL PR + AL G+
Sbjct: 158 APEL-RVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEA---ELEPRLLEALQGL 213
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDT---------- 333
+ VA GG HS L+ G +Y WG +++GQL L ++ + + E T
Sbjct: 214 RMAKVAAGGWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEE 273
Query: 334 ----------YFRNI----PILVVPNGVQLV--ACGHSHTLVYMRDGRIHGWGYNSYGQA 377
+F I +L +P G V +CG HT V R G ++ WG+ YGQ
Sbjct: 274 LAVADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQL 333
Query: 378 ANEKSTYAWYPSPVDWCVG---EVRKLAAGGGHSAVLA 412
++ ST P V++ V EVR + G ++ V A
Sbjct: 334 GHKDSTSLDRPCCVEYFVERQLEVRAVTCGPWNTYVYA 371
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 93/242 (38%), Gaps = 27/242 (11%)
Query: 50 PPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK 109
P F P R + G EH + + G +F+WGA GQLG GT E P ++
Sbjct: 149 PEPPFCQPLAPELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLE 208
Query: 110 QLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTII 169
LQ + ++ G + ++E T +++WG N+ P
Sbjct: 209 ALQGLRMAKVAAGGWHSVCLSE---------TGDIYIWGWNESGQLA-------LPTRSG 252
Query: 170 CQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK 229
+ L+E GL + + G I I+ + LD P
Sbjct: 253 TENKAEREEATELNEDGLKEELAVADAGAPAHFI---------AIQPFPALLD-LPLGSD 302
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
SCG H+A V+ GE+YTWG G GQLGH S D+ V + ++ V
Sbjct: 303 AVMASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVEYFVERQ-LEVRAVT 361
Query: 290 CG 291
CG
Sbjct: 362 CG 363
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 59/146 (40%), Gaps = 36/146 (24%)
Query: 23 IYVWGYNHSGQTG---RKGRERQLR---------------------------IPKQLPPE 52
IY+WG+N SGQ R G E + I Q P
Sbjct: 234 IYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEELAVADAGAPAHFIAIQPFPA 293
Query: 53 LFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHP---EKVK 109
L P G+++ + +CG HTA V G L+TWG ++GQLG P E
Sbjct: 294 LLDLPLGSDA--VMASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVEYFV 351
Query: 110 QLQSEFVKSISCGAHCTAAIAEPREN 135
+ Q E V++++CG T A R+
Sbjct: 352 ERQLE-VRAVTCGPWNTYVYAMERDK 376
>sp|A6NED2|RCCD1_HUMAN RCC1 domain-containing protein 1 OS=Homo sapiens GN=RCCD1 PE=1 SV=1
Length = 376
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 101/208 (48%), Gaps = 32/208 (15%)
Query: 224 APELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
APEL + Q+ G H+ + G+V++WG G GQLGH +L++ EL PR + AL G+
Sbjct: 155 APEL-RARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEA---ELEPRLLEALQGL 210
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGL----------------------GPQT 321
+ +VA GG HS ++ G +Y WG +++GQL L G Q
Sbjct: 211 VMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQV 270
Query: 322 RSFSLIPNESDTYFRNI----PILVVPNGVQLV--ACGHSHTLVYMRDGRIHGWGYNSYG 375
+ + + F + +L +P G V +CG HT V R G ++ WG+ YG
Sbjct: 271 KRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYG 330
Query: 376 QAANEKSTYAWYPSPVDWCVGEVRKLAA 403
Q +E +T P V++ V + ++ A
Sbjct: 331 QLGHEDTTSLDRPRRVEYFVDKQLQVKA 358
Score = 68.9 bits (167), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 93/237 (39%), Gaps = 52/237 (21%)
Query: 159 FWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYA 218
F+ P Q+ G+ H + L G + +WG +GQLG G T E PR+++
Sbjct: 150 FYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHG-TLEAELEPRLLEALQ 208
Query: 219 KFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQ-SGDKELLPRRV 277
+ + +V+ G +HS VSE G++Y WG GQL + + D E + R
Sbjct: 209 GLV--------MAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREA 260
Query: 278 VAL--DGIFIK--------------------------------DVACGGVHSCALTSKGA 303
L DG +K +CG H+ +T G
Sbjct: 261 TELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGE 320
Query: 304 LYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
LY WG + GQLG + SL YF + + V+ V CG +T VY
Sbjct: 321 LYTWGWGKYGQLG---HEDTTSLDRPRRVEYFVDKQLQ-----VKAVTCGPWNTYVY 369
Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 97/274 (35%), Gaps = 89/274 (32%)
Query: 50 PPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVK 109
P F P R + G EH + + G +F+WG GQLG GT E
Sbjct: 146 PRAPFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEA-------- 197
Query: 110 QLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTII 169
+L+ ++++ ++
Sbjct: 198 ELEPRLLEALQ---------------------------------------------GLVM 212
Query: 170 CQVSCGSVHVVALSECGLLQAWGYNEYGQLG----------------------------- 200
+V+ G H V +SE G + WG+NE GQL
Sbjct: 213 AEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQVKR 272
Query: 201 RGITCEGLQGPRV-IKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ 259
G +G P + ++ + LD P + SCG H+A V+ GE+YTWG G GQ
Sbjct: 273 TGGAEDGAPAPFIAVQPFPALLD-LPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQ 331
Query: 260 LGHCSLQSGDKELLPRRVVAL--DGIFIKDVACG 291
LGH S D+ PRRV + +K V CG
Sbjct: 332 LGHEDTTSLDR---PRRVEYFVDKQLQVKAVTCG 362
>sp|Q8BK67|RCC2_MOUSE Protein RCC2 OS=Mus musculus GN=Rcc2 PE=2 SV=1
Length = 520
Score = 89.4 bits (220), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 110/474 (23%), Positives = 194/474 (40%), Gaps = 91/474 (19%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLP-----PELFGCPAGANSRWLDIACGHEHT 74
K + ++G + GRK +Q + L P +GC +G R + H+
Sbjct: 101 KGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHS 160
Query: 75 AAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPRE 134
+ ++G L++WG NE GQLG G + + P ++ L E + +CG + T A+ +
Sbjct: 161 LLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTD--- 217
Query: 135 NDGTISTSRLWVWGQNQGSNFPRLFWGAFT-----PNTI------ICQVSCGSVHVVALS 183
T ++ +G+N+ +L G T P I I +++CG+ + +
Sbjct: 218 ------TGSVFAFGENK---MGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMLMD 268
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVI--------KGYAKFLDEAPELE------- 228
G L ++G EYGQLG + + + I + A F+++ + +
Sbjct: 269 CKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNV 328
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD--GIFIK 286
+ V+CG H+ + V++WG G G+LGH + E++PR V D G
Sbjct: 329 VVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD---EMVPRLVKLFDFPGRGAT 385
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
+ G S A++ G L+ WG + + ES Y + + L
Sbjct: 386 QIYAGYTCSFAVSEVGGLFFWGATNTSR---------------ESTMYPKAVQDLCGWR- 429
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGG 406
++ +ACG S +V A ++ST +W PSP GE+ G
Sbjct: 430 IRSLACGKSSIIV------------------AADESTISWGPSPT---FGEL----GYGD 464
Query: 407 HSAVLADACSLKELCEFRLAESVTLSNASEIEDVASRTGSEALARLCERLREHS 460
H + A + + +E V + + + V +R SEA +RL E++
Sbjct: 465 HKPKSSTAAQEVKTLDGIFSEQVAMGYSHSL--VIARDESEAEKEKLQRLPEYT 516
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 154/380 (40%), Gaps = 75/380 (19%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
I + ++ WG N GQ G G +++ P+ + A ++ + ACG HT A
Sbjct: 163 ITTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLI-------EALSHEAIVLAACGRNHTLA 214
Query: 77 VASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTA--------- 127
+ G++F +G N+ GQLG G + + + ++CGA +
Sbjct: 215 LTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMLMDCKGNLY 274
Query: 128 -------------------AIAEPRENDGTISTSR--LWVWGQNQGSNFPRLFWGAFTPN 166
A A+ E D + R +++ G P PN
Sbjct: 275 SFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILP-------VPN 327
Query: 167 TIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPE 226
++ V+CG+ H + L + +WG+ YG+LG + + PR++K L + P
Sbjct: 328 VVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMV-PRLVK-----LFDFPG 381
Query: 227 LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
TQ+ G S AVSE G ++ WG + S + + P+ V L G I+
Sbjct: 382 -RGATQIYAGYTCSFAVSEVGGLFFWGATNT---------SRESTMYPKAVQDLCGWRIR 431
Query: 287 DVACGGVHSCALTSKGALYAWGGSQA-GQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
+AC G S + + + +WG S G+LG G S E T +
Sbjct: 432 SLAC-GKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTL----------D 480
Query: 346 GV--QLVACGHSHTLVYMRD 363
G+ + VA G+SH+LV RD
Sbjct: 481 GIFSEQVAMGYSHSLVIARD 500
>sp|Q52KW8|RCC2_XENLA Protein RCC2 homolog OS=Xenopus laevis GN=rcc2 PE=2 SV=1
Length = 513
Score = 88.6 bits (218), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 108/450 (24%), Positives = 187/450 (41%), Gaps = 79/450 (17%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLP-----PELFGCPAGANSRWLDIACGHEH 73
AK + ++G + GRK +Q + L P +GC G R + H
Sbjct: 93 AKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLTGVQVRSVASGSCAAH 152
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPR 133
+ + +G L++WG N+ GQLG G + P+ ++ L+ E +CG + T A+ E
Sbjct: 153 SLLITVEGKLWSWGRNDKGQLGHGDIKRIDVPKLIESLKGEVFVHAACGRNHTLALTE-- 210
Query: 134 ENDGTISTSRLWVWGQNQGSNFPRLFWGAFT-----PNTI------ICQVSCGSVHVVAL 182
+G++ + +G+N+ +L G T P I I +V+CG+ + +
Sbjct: 211 --NGSV-----YAFGENK---MGQLGLGNKTDAVPSPAQILYNGQPITKVACGAEFSMIM 260
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVI--------KGYAKFLDEAPELE------ 228
G L ++G EYGQLG + + + I + A F+++ + +
Sbjct: 261 DCKGNLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVPN 320
Query: 229 -KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD--GIFI 285
+ ++CG HS + V++WG G G+LGH + E++PR V D G
Sbjct: 321 VVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRD---EMVPRLVKLFDFPGRGA 377
Query: 286 KDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPN 345
+ G S A++ G L+ WG + + +S Y + + L
Sbjct: 378 AQIYAGATCSFAVSEMGGLFFWGATNTSR---------------DSTMYPKAVQDLCGWK 422
Query: 346 GVQLVACGHSHTLVYMRDGRIHGWGYNS------YGQAANEKSTYAWYPSPVDWCVGEVR 399
V+ +ACG S +V + I WG + YG + ST A +D +
Sbjct: 423 -VRSLACGKSSIIVAADESTIS-WGPSPTFGELGYGDNKAKSSTTAQEVKTLDGIYSD-- 478
Query: 400 KLAAGGGHSAVLA------DACSLKELCEF 423
++ G H+ V+A D LK+L E+
Sbjct: 479 QVIMGNSHTLVVARDETEQDKEKLKKLPEY 508
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 157/384 (40%), Gaps = 83/384 (21%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPK---QLPPELFGCPAGANSRWLDIACGHEH 73
I + ++ WG N GQ G G +++ +PK L E+F + ACG H
Sbjct: 156 ITVEGKLWSWGRNDKGQLGH-GDIKRIDVPKLIESLKGEVF----------VHAACGRNH 204
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTA----- 127
T A+ +G+++ +G N+ GQLG G + + P ++ + + ++CGA +
Sbjct: 205 TLALTENGSVYAFGENKMGQLGLGNKTDAVPSPAQI-LYNGQPITKVACGAEFSMIMDCK 263
Query: 128 -----------------------AIAEPRENDGTISTSRLWVWGQ--NQGSNFPRLFWGA 162
A A+ E D + R+ ++ + G P
Sbjct: 264 GNLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILP------ 317
Query: 163 FTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLD 222
PN ++ ++CG H + L + +WG+ YG+LG + + PR++K L
Sbjct: 318 -VPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMV-PRLVK-----LF 370
Query: 223 EAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG 282
+ P Q+ G S AVSE G ++ WG + S D + P+ V L G
Sbjct: 371 DFPG-RGAAQIYAGATCSFAVSEMGGLFFWG---------ATNTSRDSTMYPKAVQDLCG 420
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQA-GQLGLGPQTRSFSLIPNESDTYFRNIPIL 341
++ +AC G S + + + +WG S G+LG G S E T
Sbjct: 421 WKVRSLAC-GKSSIIVAADESTISWGPSPTFGELGYGDNKAKSSTTAQEVKTL------- 472
Query: 342 VVPNGV--QLVACGHSHTLVYMRD 363
+G+ V G+SHTLV RD
Sbjct: 473 ---DGIYSDQVIMGNSHTLVVARD 493
>sp|Q8SSY6|SPKUL_DICDI Bifunctional serine/threonine-protein kinase/NEDD4-like E3
ubiquitin-protein ligase OS=Dictyostelium discoideum
GN=DDB_G0276527 PE=3 SV=2
Length = 1887
Score = 88.6 bits (218), Expect = 1e-16, Method: Composition-based stats.
Identities = 81/347 (23%), Positives = 139/347 (40%), Gaps = 94/347 (27%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
I+ G H++ + G L+T+G G+LG G E P+ V+ Q++
Sbjct: 193 ISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTK------------ 240
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
P+ + ++ G H +AL+ CG
Sbjct: 241 --------------------------------------PSLRVVSIANGGKHSLALTICG 262
Query: 187 LLQAWGYNEYGQLG--RGITCEGLQGPRVIKGYAKFL-------------------DEAP 225
+ +WG N+ QLG G + P++I + D A
Sbjct: 263 KVYSWGGNDSCQLGLGNGSSSSYYSLPQLINFNISYNNNNNNNNNNSTNNNNNNNNDGAQ 322
Query: 226 ELE-------------KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKEL 272
+ KI ++SCG SA +++ G ++T+G G G+LG G++ L
Sbjct: 323 QQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLG-----LGEQSL 377
Query: 273 L----PRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIP 328
L P+ V +L G FI D++ GG HS LT+KG ++++G + GQLG+G + IP
Sbjct: 378 LMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQ-QTIP 436
Query: 329 NESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWGYNSYG 375
+ + + P + V+ G H++ + + WG + YG
Sbjct: 437 KQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDNNDTYAWGRSDYG 483
Score = 85.9 bits (211), Expect = 6e-16, Method: Composition-based stats.
Identities = 66/258 (25%), Positives = 106/258 (41%), Gaps = 58/258 (22%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEE--GRKHPEKVKQLQSEFVKSISCG 122
+ ++CG +A + G LFT+G + G+LG G + + P+ V+ LQ F
Sbjct: 341 VKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHF------- 393
Query: 123 AHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVAL 182
I +S G H + L
Sbjct: 394 ----------------------------------------------IIDMSSGGGHSLVL 407
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
+ GL+ ++G N+ GQLG G P+ I+ + + + I +VS G YHS A
Sbjct: 408 TNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIA 467
Query: 243 VSENGEVYTWGLGSVGQLGHCSLQSGDKE---LLPRRVVALDGIFIKDVACGGVHSCALT 299
+S+N + Y WG G LG GD+ L+ V +D + DV+ G H+ A++
Sbjct: 468 ISDNNDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDNVKFIDVSSGFQHNVAMS 527
Query: 300 SKGALYAWGGSQAGQLGL 317
G+LY+WG + +LG
Sbjct: 528 IDGSLYSWGCNAGQRLGF 545
Score = 71.2 bits (173), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/91 (39%), Positives = 55/91 (60%)
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKD 287
+KI +S G HS+ +++ G +YT+G G +G+LGH +L+S L + +
Sbjct: 188 QKIVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVS 247
Query: 288 VACGGVHSCALTSKGALYAWGGSQAGQLGLG 318
+A GG HS ALT G +Y+WGG+ + QLGLG
Sbjct: 248 IANGGKHSLALTICGKVYSWGGNDSCQLGLG 278
Score = 59.7 bits (143), Expect = 5e-08, Method: Composition-based stats.
Identities = 69/300 (23%), Positives = 122/300 (40%), Gaps = 74/300 (24%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
I +S G++H +++ G L +G G+LG G E P+++ +F P L
Sbjct: 190 IVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHG-NLESYSSPKLV----EFFQTKPSL- 243
Query: 229 KITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV----------- 277
++ ++ G HS A++ G+VY+WG QLG + S LP+ +
Sbjct: 244 RVVSIANGGKHSLALTICGKVYSWGGNDSCQLGLGNGSSSSYYSLPQLINFNISYNNNNN 303
Query: 278 ------------VALDG-----------------IFIKDVACGGVHSCALTSKGALYAWG 308
DG I I ++CG S +T KG L+ +G
Sbjct: 304 NNNNNSTNNNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDKGLLFTFG 363
Query: 309 GSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHG 368
G+LGLG Q SL+ + +++ + + ++ G H+LV G +
Sbjct: 364 RGDHGRLGLGEQ----SLLMQSTPKLVQSLQGHFIID----MSSGGGHSLVLTNKGLVFS 415
Query: 369 WGYNSYGQA-----ANEKS----------TYAWYPSPVDWCVGEVRKLAAGGGHSAVLAD 413
+G N GQ +N+++ + P++ + K++AGG HS ++D
Sbjct: 416 FGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPIN-----IIKVSAGGYHSIAISD 470
Score = 43.5 bits (101), Expect = 0.004, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 32/47 (68%)
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEK 107
N +++D++ G +H A++ DG+L++WG N +LG ++E + P+K
Sbjct: 510 NVKFIDVSSGFQHNVAMSIDGSLYSWGCNAGQRLGFKSDENQLTPKK 556
Score = 33.9 bits (76), Expect = 3.2, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Query: 20 KSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANS-RWLDIACGHEHTAAVA 78
K ++ +G N GQ G Q IPKQ+ + ++ G H+ A++
Sbjct: 410 KGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAIS 469
Query: 79 SDGTLFTWGANEFGQLG 95
+ + WG +++G LG
Sbjct: 470 DNNDTYAWGRSDYGVLG 486
>sp|Q8VE37|RCC1_MOUSE Regulator of chromosome condensation OS=Mus musculus GN=Rcc1 PE=1
SV=1
Length = 421
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 160/370 (43%), Gaps = 54/370 (14%)
Query: 69 CGHEHTAAVASDGTLFTWGANEFGQLG-DGTEEGRKHPEKVKQLQSEFVKSISCGAHCTA 127
G HT ++ G ++++G N+ G LG D + EG + +LQ + V+ +S G TA
Sbjct: 74 AGGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQ-VSAGDSHTA 132
Query: 128 AIAEPRENDGTISTSRLWVWGQNQGSN----FPRLFWGAFTPNTI-----ICQVSCGSVH 178
A+ E DG R+++WG + +N + P + + +V+ G+ H
Sbjct: 133 ALTE----DG-----RVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDAPVVKVASGNDH 183
Query: 179 VVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK--------- 229
+V L+ G L G E GQLGR +G R +G + L L K
Sbjct: 184 LVMLTNDGDLYTLGCGEQGQLGRVPELFANRGGR--QGLGRLLVPRCVLLKSRGTRGRVR 241
Query: 230 ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVA 289
CG Y + A+S G VY +GL + QLG S +P+ + + V
Sbjct: 242 FQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSC---FIPQNLTSFKNSTKSWVG 298
Query: 290 CGG--VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGV 347
G H+ + S+G Y+ G ++ G+LGLG S IP T +P+ V
Sbjct: 299 FSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKS-IP----TLISRLPV------V 347
Query: 348 QLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-----VRKLA 402
VACG S +DGR+ WG + Q + AW SPV+ + V ++
Sbjct: 348 SSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAW--SPVEMTGKQLENRVVLTVS 405
Query: 403 AGGGHSAVLA 412
+GG H+ +L
Sbjct: 406 SGGQHTVLLV 415
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 121/263 (46%), Gaps = 37/263 (14%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ Q G +H V LS+ G + ++G N+ G LGR + EG + ++ G + E
Sbjct: 69 VVQAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSE---MVPGKVELQ------E 119
Query: 229 KITQVSCGEYHSAAVSENGEVYTWG--LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
K+ QVS G+ H+AA++E+G V+ WG + G +G L+ K ++P + V LD +K
Sbjct: 120 KVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGL--LEPMKKSMVPVQ-VQLDAPVVK 176
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
VA G H LT+ G LY G + GQLG P+ L N + + L+VP
Sbjct: 177 -VASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPE-----LFANRGGR--QGLGRLLVPRC 228
Query: 347 VQLVA-------------CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDW 393
V L + CG T R+G ++G+G ++Y Q + + P +
Sbjct: 229 VLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTS 288
Query: 394 CVGEVRKLA--AGGGHSAVLADA 414
+ +GG H V D+
Sbjct: 289 FKNSTKSWVGFSGGQHHTVCMDS 311
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 109/258 (42%), Gaps = 38/258 (14%)
Query: 23 IYVWG--YNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
+++WG +++G G ++ +P Q+ ++ + +A G++H + +D
Sbjct: 140 VFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ---------LDAPVVKVASGNDHLVMLTND 190
Query: 81 GTLFTWGANEFGQLGDGTE-----EGRKHPEKVKQLQSEFVKS-----------ISCGAH 124
G L+T G E GQLG E GR+ ++ + +KS CGA+
Sbjct: 191 GDLYTLGCGEQGQLGRVPELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAY 250
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTII-CQVSCGSVHVVALS 183
T AI+ G ++ + GS F +F +T S G H V +
Sbjct: 251 FTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMD 310
Query: 184 ECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAV 243
G + G EYG+LG G E P +I L ++ V+CG AV
Sbjct: 311 SEGKAYSLGRAEYGRLGLGEGAEEKSIPTLIS----------RLPVVSSVACGASVGYAV 360
Query: 244 SENGEVYTWGLGSVGQLG 261
S++G V+ WG+G+ QLG
Sbjct: 361 SKDGRVFAWGMGTNYQLG 378
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 28/137 (20%)
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQ--LGDGTEEGRKHPEKVKQLQSEFVK 117
+ W+ + G HT + S+G ++ G E+G+ LG+G EE + P + +L V
Sbjct: 292 STKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEE-KSIPTLISRL--PVVS 348
Query: 118 SISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNF------------PRLFWGAFTP 165
S++CGA A+++ DG R++ WG G+N+ P G
Sbjct: 349 SVACGASVGYAVSK----DG-----RVFAWG--MGTNYQLGTGQDEDAWSPVEMTGKQLE 397
Query: 166 NTIICQVSCGSVHVVAL 182
N ++ VS G H V L
Sbjct: 398 NRVVLTVSSGGQHTVLL 414
Score = 40.4 bits (93), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV--KQLQSEFVKSISCGAH 124
+ACG AV+ DG +F WG QLG G +E P ++ KQL++ V ++S G
Sbjct: 350 VACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQ 409
Query: 125 CTAAIAE 131
T + +
Sbjct: 410 HTVLLVK 416
>sp|P23800|RCC1_MESAU Regulator of chromosome condensation OS=Mesocricetus auratus
GN=RCC1 PE=1 SV=1
Length = 421
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 162/371 (43%), Gaps = 56/371 (15%)
Query: 69 CGHEHTAAVASDGTLFTWGANEFGQLG-DGTEEGRKH-PEKVKQLQSEFVKSISCGAHCT 126
G HT + G ++++G N+ G LG D + EG + P KV +LQ + V+ +S G T
Sbjct: 74 AGGMHTVCLNQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKV-ELQEKVVQ-VSAGDSHT 131
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSN----FPRLFWGAFTPNTI-----ICQVSCGSV 177
AA+ E DG R+++WG + +N + P + + +V+ G+
Sbjct: 132 AALTE----DG-----RVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDMPVVKVASGND 182
Query: 178 HVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEK-------- 229
H+V L+ G L G E GQLGR +G R +G + L L K
Sbjct: 183 HLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGR--QGLERLLVPKCVLLKSRGSRGRV 240
Query: 230 -ITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDV 288
CG Y + A+S G VY +GL + QLG S +P+ + + V
Sbjct: 241 RFQDAFCGAYLTFAISREGHVYGFGLSNYHQLGTPGTASC---FIPQNLTSFKNSTKSWV 297
Query: 289 ACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
G H+ + S+G Y+ G ++ G+LGLG S IP T +P+
Sbjct: 298 GFSGGQHHTICMDSEGKAYSLGRAEYGRLGLGEGAEEKS-IP----TLISRLPV------ 346
Query: 347 VQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGE-----VRKL 401
V VACG S +DGR+ WG + Q + AW SPV+ + V +
Sbjct: 347 VSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAW--SPVEMTGKQLENRVVLTV 404
Query: 402 AAGGGHSAVLA 412
++GG H+ +L
Sbjct: 405 SSGGQHTVLLV 415
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 112/235 (47%), Gaps = 35/235 (14%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELE 228
+ Q G +H V L++ G + ++G N+ G LGR + EG + ++ G + E
Sbjct: 69 VVQAEAGGMHTVCLNQSGQVYSFGCNDEGALGRDTSVEGSE---MVPGKVELQ------E 119
Query: 229 KITQVSCGEYHSAAVSENGEVYTWG--LGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
K+ QVS G+ H+AA++E+G V+ WG + G +G L+ K ++P + V LD +K
Sbjct: 120 KVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGL--LEPMKKSMVPVQ-VQLDMPVVK 176
Query: 287 DVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG 346
VA G H LT+ G LY G + GQLG P+ L N + + L+VP
Sbjct: 177 -VASGNDHLVMLTTDGDLYTLGCGEQGQLGRVPE-----LFANRGGR--QGLERLLVPKC 228
Query: 347 VQLVA-------------CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYP 388
V L + CG T R+G ++G+G ++Y Q + + P
Sbjct: 229 VLLKSRGSRGRVRFQDAFCGAYLTFAISREGHVYGFGLSNYHQLGTPGTASCFIP 283
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 116/274 (42%), Gaps = 70/274 (25%)
Query: 23 IYVWG--YNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASD 80
+++WG +++G G ++ +P Q+ ++ P + +A G++H + +D
Sbjct: 140 VFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDM---PV------VKVASGNDHLVMLTTD 190
Query: 81 GTLFTWGANEFGQLGDGTEE-----GRKHPEKVKQLQSEFVKS-----------ISCGAH 124
G L+T G E GQLG E GR+ E++ + +KS CGA+
Sbjct: 191 GDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCGAY 250
Query: 125 CTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQV------------ 172
T AI+ RE ++ +G SN+ +L TP T C +
Sbjct: 251 LTFAIS--REG-------HVYGFGL---SNYHQLG----TPGTASCFIPQNLTSFKNSTK 294
Query: 173 -----SCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPEL 227
S G H + + G + G EYG+LG G E P +I L
Sbjct: 295 SWVGFSGGQHHTICMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLIS----------RL 344
Query: 228 EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG 261
++ V+CG AVS++G V+ WG+G+ QLG
Sbjct: 345 PVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLG 378
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV--KQLQSEFVKSISCGAH 124
+ACG AV+ DG +F WG QLG G +E P ++ KQL++ V ++S G
Sbjct: 350 VACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQ 409
Query: 125 CTAAIAEPREN 135
T + + +E
Sbjct: 410 HTVLLVKDKEQ 420
>sp|P25183|RCC1_XENLA Regulator of chromosome condensation OS=Xenopus laevis GN=rcc1 PE=2
SV=1
Length = 424
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 162/371 (43%), Gaps = 55/371 (14%)
Query: 68 ACGHEHTAAVASDGTLFTWGANEFGQLG-DGTEEGRK-HPEKVKQLQSEFVKSISCGAHC 125
A G HT + + G+++T+G N+ G LG D +EEG + P KV+ +E V +S G
Sbjct: 79 AAGGMHTVCLGASGSIYTFGCNDEGALGRDTSEEGSEMQPGKVE--LAEKVVQVSAGDSH 136
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSN----FPRLFWGAFTP-----NTIICQVSCGS 176
TAA+ E DG R++V+G + +N + P NT + +++ G+
Sbjct: 137 TAALTE----DG-----RVFVFGSFRDNNGVIGLLEPMKKSMVPVQVQINTPVIKIASGN 187
Query: 177 VHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT----- 231
H+V L+ G L G E GQLGR +G R KG + L P+ +
Sbjct: 188 DHLVLLTVDGDLYTSGCGEQGQLGRVPERFTNRGGR--KGLERLL--VPQCIHLKAKGSG 243
Query: 232 -----QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIK 286
V CG Y + AVS+ G VY +GL + QLG + Q+ P+ + +
Sbjct: 244 RVHFQDVFCGAYFTFAVSQEGHVYGFGLSNYHQLGTKNTQAC---YAPQNLTSFKNSTKS 300
Query: 287 DVACGG--VHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP 344
+ G H+ + S+G Y+ G ++ G+LGLG S PI +P
Sbjct: 301 WIGFSGGQHHTVCVDSEGKAYSLGRAEYGRLGLGENAEEQS----------EPTPIPDLP 350
Query: 345 NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVD---WCVGEVRKL 401
+ VA G S + DG + WG + Q + W P + EV +
Sbjct: 351 K-INSVASGASVSYAVSTDGCVFAWGMGTNLQLGTGEEEDVWSPEQMTGKHLEDREVLSV 409
Query: 402 AAGGGHSAVLA 412
++GG H+ +L
Sbjct: 410 SSGGQHTVLLV 420
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 119/265 (44%), Gaps = 42/265 (15%)
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEG--LQGPRVIKGYAKFLDEAPE 226
I Q + G +H V L G + +G N+ G LGR + EG +Q +V E
Sbjct: 75 IVQAAAGGMHTVCLGASGSIYTFGCNDEGALGRDTSEEGSEMQPGKV------------E 122
Query: 227 L-EKITQVSCGEYHSAAVSENGEVYTWG--LGSVGQLGHCSLQSGDKELLPRRVVALDGI 283
L EK+ QVS G+ H+AA++E+G V+ +G + G +G L+ K ++P + V ++
Sbjct: 123 LAEKVVQVSAGDSHTAALTEDGRVFVFGSFRDNNGVIG--LLEPMKKSMVPVQ-VQINTP 179
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
IK +A G H LT G LY G + GQLG P+ N + + L+V
Sbjct: 180 VIK-IASGNDHLVLLTVDGDLYTSGCGEQGQLGRVPER-----FTNRGGR--KGLERLLV 231
Query: 344 PNGVQL------------VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
P + L V CG T ++G ++G+G ++Y Q + + + P +
Sbjct: 232 PQCIHLKAKGSGRVHFQDVFCGAYFTFAVSQEGHVYGFGLSNYHQLGTKNTQACYAPQNL 291
Query: 392 DWCVGEVRKLA--AGGGHSAVLADA 414
+ +GG H V D+
Sbjct: 292 TSFKNSTKSWIGFSGGQHHTVCVDS 316
Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 116/261 (44%), Gaps = 35/261 (13%)
Query: 61 NSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEE-----GRKHPEKVKQLQSEF 115
N+ + IA G++H + DG L+T G E GQLG E GRK E++ Q
Sbjct: 177 NTPVIKIASGNDHLVLLTVDGDLYTSGCGEQGQLGRVPERFTNRGGRKGLERLLVPQCIH 236
Query: 116 VKS----------ISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTP 165
+K+ + CGA+ T A+++ G ++ + +N + + +F
Sbjct: 237 LKAKGSGRVHFQDVFCGAYFTFAVSQEGHVYGFGLSNYHQLGTKNTQACYAPQNLTSFKN 296
Query: 166 NTII-CQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
+T S G H V + G + G EYG+LG G E P I
Sbjct: 297 STKSWIGFSGGQHHTVCVDSEGKAYSLGRAEYGRLGLGENAEEQSEPTPI---------- 346
Query: 225 PELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELL--PRRVVA--L 280
P+L KI V+ G S AVS +G V+ WG+G+ QLG +G++E + P ++ L
Sbjct: 347 PDLPKINSVASGASVSYAVSTDGCVFAWGMGTNLQLG-----TGEEEDVWSPEQMTGKHL 401
Query: 281 DGIFIKDVACGGVHSCALTSK 301
+ + V+ GG H+ L K
Sbjct: 402 EDREVLSVSSGGQHTVLLVRK 422
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 18/134 (13%)
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIF--IKDVACGGVHSC 296
H + + G+V T G G VGQLG ++++ R+ AL + I A GG+H+
Sbjct: 33 HPSHGTVGGQVLTLGQGDVGQLGL------GEDIMERKKPALVTLTEDIVQAAAGGMHTV 86
Query: 297 ALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSH 356
L + G++Y +G + G LG + P + + + V V+ G SH
Sbjct: 87 CLGASGSIYTFGCNDEGALGRDTSEEGSEMQPGKVE----------LAEKVVQVSAGDSH 136
Query: 357 TLVYMRDGRIHGWG 370
T DGR+ +G
Sbjct: 137 TAALTEDGRVFVFG 150
Score = 40.0 bits (92), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKV--KQLQSEFVKSISCGAH 124
+A G + AV++DG +F WG QLG G EE PE++ K L+ V S+S G
Sbjct: 355 VASGASVSYAVSTDGCVFAWGMGTNLQLGTGEEEDVWSPEQMTGKHLEDREVLSVSSGGQ 414
Query: 125 CTAAIAEPR 133
T + R
Sbjct: 415 HTVLLVRKR 423
>sp|Q86SG6|NEK8_HUMAN Serine/threonine-protein kinase Nek8 OS=Homo sapiens GN=NEK8 PE=1
SV=1
Length = 692
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 135/313 (43%), Gaps = 40/313 (12%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ACG TA + G + T+G+ G LG G+ P V+ L + ++CGA
Sbjct: 396 VACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHV 455
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGA-----------FTPNTIICQVSCG 175
A++ RE L+ WG+ RL G P +V CG
Sbjct: 456 LALSTERE---------LFAWGRGDSG---RLGLGTRESHSCPQQVPMPPGQEAQRVVCG 503
Query: 176 SVHVVALSECGLLQAWGYNEYGQLG---RGITCEGLQGPRVIKGYA-KFLDEAP-ELEKI 230
+ L+ G A G N + +LG + E + +V + + L AP + E +
Sbjct: 504 IDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPL 563
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVAC 290
+ G HSAAV+ +G+ YT+G GQLG + + G + P +V L+GI + VAC
Sbjct: 564 LSIDLGTAHSAAVTASGDCYTFGSNQHGQLG-TNTRRGSRA--PCKVQGLEGIKMAMVAC 620
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
G + A+ ++ +Y+WG G+LG + +T+ P V V
Sbjct: 621 GDAFTVAIGAESEVYSWGKGARGRLGRRDEDAGLPRPVQLDETH---------PYTVTSV 671
Query: 351 ACGHSHTLVYMRD 363
+C H +TL+ +R
Sbjct: 672 SCCHGNTLLAVRS 684
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 116/253 (45%), Gaps = 28/253 (11%)
Query: 142 SRLWVWGQNQGS--NFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
S ++ WG G+ P L NT + QV+ G ++ G L W G
Sbjct: 312 SSVYAWGGGLGTPLRLPML-------NTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAG 364
Query: 200 GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ 259
G + ++ P+ + ++FL E I V+CG++ +A +++ G + T+G GS G
Sbjct: 365 GGSLLPGAVEQPQP-QFISRFL-EGQSGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGC 422
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LGH SL + P V AL G + VACG H AL+++ L+AWG +G+LGLG
Sbjct: 423 LGHGSLTDISQ---PTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDSGRLGLG- 478
Query: 320 QTRSFSLIPNESDTYFRNIPILVVPNG--VQLVACGHSHTLVYMRDGRIHGWGYNSYGQA 377
TR ES + + +P+ P G Q V CG +++ G+ G N + +
Sbjct: 479 -TR-------ESHSCPQQVPM---PPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKL 527
Query: 378 ANEKSTYAWYPSP 390
+ + P P
Sbjct: 528 GLDHLSLGEEPVP 540
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 157/412 (38%), Gaps = 96/412 (23%)
Query: 18 PAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAV 77
P S++Y WG G LR+P N+ + +A G A V
Sbjct: 309 PPLSSVYAWG---------GGLGTPLRLPM------------LNTEVVQVAAGRTQKAGV 347
Query: 78 ASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFV------------KSISCGAHC 125
G L W A G G G P V+Q Q +F+ K ++CG
Sbjct: 348 TRSGRLILWEAPPLGAGG-----GSLLPGAVEQPQPQFISRFLEGQSGVTIKHVACGDFF 402
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFT----PNTI-------ICQVSC 174
TA + T R + GSN L G+ T P + + QV+C
Sbjct: 403 TACL-----------TDRGIIMTFGSGSNG-CLGHGSLTDISQPTIVEALLGYEMVQVAC 450
Query: 175 GSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVS 234
G+ HV+ALS L AWG + G+LG G T E P+ + P ++ +V
Sbjct: 451 GASHVLALSTERELFAWGRGDSGRLGLG-TRESHSCPQQVP--------MPPGQEAQRVV 501
Query: 235 CGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV-----------VALDGI 283
CG S ++ G+ G +LG L G++ + ++V LD
Sbjct: 502 CGIDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQE 561
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
+ + G HS A+T+ G Y +G +Q GQLG TR S P +
Sbjct: 562 PLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGT--NTRRGSRAPCKVQGL--------- 610
Query: 344 PNGVQL--VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDW 393
G+++ VACG + T+ + ++ WG + G+ + A P PV
Sbjct: 611 -EGIKMAMVACGDAFTVAIGAESEVYSWGKGARGRLGR-RDEDAGLPRPVQL 660
>sp|Q90XC2|NEK8_DANRE Serine/threonine-protein kinase Nek8 OS=Danio rerio GN=nek8 PE=2
SV=1
Length = 697
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 115/260 (44%), Gaps = 21/260 (8%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
++CG T + G + T+G+ G LG G P+ V+ L + +SCGA
Sbjct: 403 VSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYELVQVSCGASHV 462
Query: 127 AAIAEPRE--NDGTISTSRLWVWGQNQGSNFPRL--FWGAFTPNTIICQVSCGSVHVVAL 182
A+ RE + G RL + Q+ N P+ F ++C V C + +
Sbjct: 463 LAVTNEREVFSWGRGDNGRLGLATQD-SHNCPQQVSLPADFEAQRVLCGVDCSMI----M 517
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVI-----KGYAKFLDEAP-ELEKITQVSCG 236
S + A G N + +LG G + P + + AP EKI + G
Sbjct: 518 STQHQILACGNNRFNKLGLD-KVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYIDIG 576
Query: 237 EYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSC 296
HS AV+E G+ +T+G GQLG CS + + +P +V L GI + ACG +
Sbjct: 577 TAHSVAVTEKGQCFTFGSNQHGQLG-CSHRRSSR--VPYQVSGLQGITM--AACGDAFTL 631
Query: 297 ALTSKGALYAWGGSQAGQLG 316
A+ ++G +Y WG G+LG
Sbjct: 632 AIGAEGEVYTWGKGARGRLG 651
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 26/211 (12%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEF-VKSISCGA 123
+ ++CG H AV ++ +F+WG + G+LG T++ P++V L ++F + + CG
Sbjct: 453 VQVSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVS-LPADFEAQRVLCGV 511
Query: 124 HCTAAIAEPREN-------------DGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIIC 170
C+ ++ + D T + Q + + +L A I
Sbjct: 512 DCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKIV 571
Query: 171 QVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKI 230
+ G+ H VA++E G +G N++GQLG C + RV + L+ I
Sbjct: 572 YIDIGTAHSVAVTEKGQCFTFGSNQHGQLG----CSHRRSSRVPY-------QVSGLQGI 620
Query: 231 TQVSCGEYHSAAVSENGEVYTWGLGSVGQLG 261
T +CG+ + A+ GEVYTWG G+ G+LG
Sbjct: 621 TMAACGDAFTLAIGAEGEVYTWGKGARGRLG 651
Score = 68.9 bits (167), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 152/398 (38%), Gaps = 83/398 (20%)
Query: 22 AIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDG 81
++Y WG G LR+P N+ + ++ G V G
Sbjct: 321 SVYTWG---------SGISTPLRLPM------------LNTEVIQVSLGRTQKMGVTKSG 359
Query: 82 TLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFV------------KSISCGAHCTAAI 129
L TW A G G+ T P V+Q+Q +F+ KS+SCG T +
Sbjct: 360 RLITWEAPSVGS-GEPT-----LPGAVEQMQPQFISRFLEGQSGVTIKSVSCGDLFTTCL 413
Query: 130 AEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI---ICQVSCGSVHVVALSECG 186
+ G I T G NF + + + QVSCG+ HV+A++
Sbjct: 414 TD----RGIIMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYELVQVSCGASHVLAVTNER 469
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
+ +WG + G+LG T + P+ + A F + +V CG S +S
Sbjct: 470 EVFSWGRGDNGRLGLA-TQDSHNCPQQVSLPADF--------EAQRVLCGVDCSMIMSTQ 520
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDK-------------ELLPRRVVALDGIFIKDVACGGV 293
++ G +LG + ++ +L+ + + I D+ G
Sbjct: 521 HQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYIDI--GTA 578
Query: 294 HSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACG 353
HS A+T KG + +G +Q GQLG R S +P + G+ + ACG
Sbjct: 579 HSVAVTEKGQCFTFGSNQHGQLGCS--HRRSSRVPYQVSGL----------QGITMAACG 626
Query: 354 HSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPV 391
+ TL +G ++ WG + G+ ++ + P PV
Sbjct: 627 DAFTLAIGAEGEVYTWGKGARGRLGRKEEDFG-IPKPV 663
Score = 40.4 bits (93), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 11/106 (10%)
Query: 17 IPAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+ K + +G N GQ G R R R+P Q+ +G + ACG T A
Sbjct: 583 VTEKGQCFTFGSNQHGQLGCSHR-RSSRVPYQV--------SGLQGITMA-ACGDAFTLA 632
Query: 77 VASDGTLFTWGANEFGQLGDGTEE-GRKHPEKVKQLQSEFVKSISC 121
+ ++G ++TWG G+LG E+ G P ++ + + V S++C
Sbjct: 633 IGAEGEVYTWGKGARGRLGRKEEDFGIPKPVQLDESHAFTVTSVAC 678
>sp|Q91ZR4|NEK8_MOUSE Serine/threonine-protein kinase Nek8 OS=Mus musculus GN=Nek8 PE=1
SV=1
Length = 698
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 135/312 (43%), Gaps = 38/312 (12%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
+ACG TA + G + T+G+ G LG G P V+ L + ++CGA
Sbjct: 402 VACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEALLGYEMVQVACGASHV 461
Query: 127 AAIAEPRENDGTISTSRLWVWG----------QNQGSNFPRLFWGAFTPNTIICQVSCGS 176
A++ DG L+ WG + N P+ A P +V CG
Sbjct: 462 LALS----TDG-----ELFAWGRGDGGRLGLGTRESHNCPQQVPVA--PGQEAQRVVCGI 510
Query: 177 VHVVALSECGLLQAWGYNEYGQLGR---GITCEGLQGPRVIKGYA-KFLDEAP-ELEKIT 231
+ L+ G + A G N + +LG + E + +V + + L AP + E +
Sbjct: 511 DSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQEPLL 570
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
V G HSAA++ +G+ YT+G GQLG S + P RV L+GI + VACG
Sbjct: 571 CVDLGTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRA---PCRVQGLEGIKMVMVACG 627
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVA 351
+ A+ ++G +Y+WG G+LG + +T+ P V V+
Sbjct: 628 DAFTVAVGAEGEVYSWGKGTRGRLGRRDEDAGLPRPVQLDETH---------PYMVTSVS 678
Query: 352 CGHSHTLVYMRD 363
C H +TL+ +R
Sbjct: 679 CCHGNTLLAVRS 690
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 111/252 (44%), Gaps = 26/252 (10%)
Query: 142 SRLWVWGQNQGS--NFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQL 199
S ++ WG S P L NT + QV+ G ++ G L W G
Sbjct: 318 SSVYAWGGGLSSPLRLPML-------NTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAG 370
Query: 200 GRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ 259
G + ++ P+ + ++FL E I V+CG+ +A +++ G + T+G GS G
Sbjct: 371 GGTLLPGAVELPQP-QFVSRFL-EGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGC 428
Query: 260 LGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGP 319
LGH +L + P V AL G + VACG H AL++ G L+AWG G+LGL
Sbjct: 429 LGHGNLTDISQ---PTIVEALLGYEMVQVACGASHVLALSTDGELFAWGRGDGGRLGL-- 483
Query: 320 QTRSFSLIPNESDTYFRNIPILVVP-NGVQLVACGHSHTLVYMRDGRIHGWGYNSYGQAA 378
TR ES + +P V P Q V CG +++ GR+ G N + +
Sbjct: 484 GTR-------ESHNCPQQVP--VAPGQEAQRVVCGIDSSMILTSPGRVLACGSNRFNKLG 534
Query: 379 NEKSTYAWYPSP 390
+ + P P
Sbjct: 535 LDHLSLDEEPVP 546
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 152/402 (37%), Gaps = 76/402 (18%)
Query: 18 PAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAV 77
P S++Y WG G LR+P N+ + +A G A V
Sbjct: 315 PPLSSVYAWG---------GGLSSPLRLPM------------LNTEVVQVAAGRTQKAGV 353
Query: 78 ASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFV------------KSISCGAHC 125
G L W A G G G P V+ Q +FV K ++CG
Sbjct: 354 TRSGRLILWEAPPLGAGG-----GTLLPGAVELPQPQFVSRFLEGQSGVTIKHVACGDLF 408
Query: 126 TAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSEC 185
TA + + R T + G ++ + + QV+CG+ HV+ALS
Sbjct: 409 TACLTD-RGIIMTFGSGSNGCLGHGNLTDISQPTIVEALLGYEMVQVACGASHVLALSTD 467
Query: 186 GLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSE 245
G L AWG + G+ T E P+ + AP E +V CG S ++
Sbjct: 468 GELFAWGRGDGGR-LGLGTRESHNCPQQVP-------VAPGQEA-QRVVCGIDSSMILTS 518
Query: 246 NGEVYTWGLGSVGQLG--HCSLQSGDKELLPRRVV------------ALDGIFIKDVACG 291
G V G +LG H SL D+E +P + V LD + V G
Sbjct: 519 PGRVLACGSNRFNKLGLDHLSL---DEEPVPYQQVEEALSFTPLGSAPLDQEPLLCVDLG 575
Query: 292 GVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVA 351
HS A+T+ G Y +G +Q GQLG +R S P I ++ +VA
Sbjct: 576 TAHSAAITASGDCYTFGSNQHGQLGTS--SRRVSRAPCRVQG-LEGIKMV-------MVA 625
Query: 352 CGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDW 393
CG + T+ +G ++ WG + G+ + A P PV
Sbjct: 626 CGDAFTVAVGAEGEVYSWGKGTRGRLGR-RDEDAGLPRPVQL 666
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 53/111 (47%)
Query: 64 WLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGA 123
L + G H+AA+ + G +T+G+N+ GQLG + + P +V+ L+ + ++CG
Sbjct: 569 LLCVDLGTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMVMVACGD 628
Query: 124 HCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSC 174
T A+ E +R + +++ + PR T ++ VSC
Sbjct: 629 AFTVAVGAEGEVYSWGKGTRGRLGRRDEDAGLPRPVQLDETHPYMVTSVSC 679
>sp|Q9CYF5|WBS16_MOUSE Williams-Beuren syndrome chromosomal region 16 protein homolog
OS=Mus musculus GN=Wbscr16 PE=2 SV=1
Length = 461
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 145/366 (39%), Gaps = 53/366 (14%)
Query: 20 KSAIYVWGY--NHSGQTG----RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEH 73
K VWG N Q G RK + R + P ++ L ++CG H
Sbjct: 123 KDVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPLPLDRPQETKVLQVSCGRAH 182
Query: 74 TAAVASDGTLFTWGANEFGQLGDGTEEGRKHPE--KVKQLQSEF---VKSISCGAHCTAA 128
+ + +F+ G N GQ G E + E KV ++Q +F V + CG +
Sbjct: 183 SLVLTDREGVFSMGNNSHGQCGRKVVEDEVYSESHKVHRMQ-DFDGQVVQVVCGQDHSLF 241
Query: 129 IAEPRE-------NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA 181
+ + E DG G ++ P G T++ QV+ +A
Sbjct: 242 LTDKGEVYSCGWGADGQTGL------GHYNITSTPSKLGGDLAGVTVV-QVATYGDCCLA 294
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSA 241
LS G + WG +EY QL + PR + + K+ QV+CG A
Sbjct: 295 LSADGGVFGWGNSEYLQLASVTDSTQVNVPRCLPFSG--------VGKVKQVACGGTGCA 346
Query: 242 AVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG----IFIKDVACGGVHSCA 297
++ G V+ WG G +G+ G L++ E++P + L + + + CG H A
Sbjct: 347 VLNAEGHVFVWGYGILGK-GPKLLETAIPEMIPPTLFGLTEFNPEVQVSQIRCGLSHFAA 405
Query: 298 LTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL-VACGHSH 356
LT+KG L+ WG + G LG+G D YF P V G + VACG H
Sbjct: 406 LTNKGELFVWGKNIRGCLGIG----------RLEDQYF---PWRVTMPGEPVDVACGVDH 452
Query: 357 TLVYMR 362
+ +
Sbjct: 453 MVTLAK 458
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 26/215 (12%)
Query: 167 TIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPE 226
T + QVSCG H + L++ + + G N +GQ GR + + + + D
Sbjct: 171 TKVLQVSCGRAHSLVLTDREGVFSMGNNSHGQCGRKVVEDEVYSESHKVHRMQDFDG--- 227
Query: 227 LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQ--LGHCSLQSGDKELLPRRVVALDGIF 284
++ QV CG+ HS +++ GEVY+ G G+ GQ LGH ++ S +L L G+
Sbjct: 228 --QVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGD----LAGVT 281
Query: 285 IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVP 344
+ VA G AL++ G ++ WG S+ QL + +D+ N+P +
Sbjct: 282 VVQVATYGDCCLALSADGGVFGWGNSEYLQLA------------SVTDSTQVNVPRCLPF 329
Query: 345 NGV---QLVACGHSHTLVYMRDGRIHGWGYNSYGQ 376
+GV + VACG + V +G + WGY G+
Sbjct: 330 SGVGKVKQVACGGTGCAVLNAEGHVFVWGYGILGK 364
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Query: 19 AKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPA-GANSRWLDIACGHEHTAAV 77
A+ ++VWGY G G+ + + IP+ +PP LFG + I CG H AA+
Sbjct: 350 AEGHVFVWGY---GILGKGPKLLETAIPEMIPPTLFGLTEFNPEVQVSQIRCGLSHFAAL 406
Query: 78 ASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
+ G LF WG N G LG G E + P +V + E V ++CG +A+
Sbjct: 407 TNKGELFVWGKNIRGCLGIGRLEDQYFPWRVT-MPGEPV-DVACGVDHMVTLAK 458
>sp|P52499|RCC1_CANAX Protein RCC1 OS=Candida albicans GN=RCC1 PE=3 SV=1
Length = 464
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 137/322 (42%), Gaps = 58/322 (18%)
Query: 65 LDIACGHEHTAAVASDGTLFTWGA---NEFGQLGDGTEEGR--KHPEKVKQLQSEFVKSI 119
+ +A +AA+ S+G +++WG NE G LG +E + K P K+K+L+
Sbjct: 147 VQLAATDNLSAALLSNGDVYSWGCFRCNE-GLLGFLRDEIKLQKTPLKIKELKK------ 199
Query: 120 SCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNF-------PRLFWGAFTPNTI---- 168
HC I + S+ W+ G N G + R + + P
Sbjct: 200 ----HC--PIMRSVKIILLALDSKEWMPGVN-GQQYQLGRRILERHRYRSLEPQQFGLYN 252
Query: 169 ICQVSCGSVHVVALSECGLLQAWGYNEYGQLG-RGITCEGLQGPRVIKGYAKFLDEAPEL 227
I ++ G H A+ + AWG N+YGQ G E G ++K PEL
Sbjct: 253 IKYIASGDFHCFAIDHSHNVYAWGLNQYGQCALTGDNGELEDGSVLMKPTL-----IPEL 307
Query: 228 --EKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALD---- 281
+ I +++ GE+H+ A++E+G+VY WG + ++G K+ LP+ ++
Sbjct: 308 SHKGIKEIAAGEHHTLALTEDGQVYAWGRYDMKEIGI------PKDKLPKSTFKINTGTH 361
Query: 282 ----------GIFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNES 331
+ IK + G HS A+T G +YAWG ++ GLGP
Sbjct: 362 GSFSFLQNLFAVKIKTIGVGSHHSFAVTEDGVVYAWGFAETYGPGLGPSIDDVEKPTRIV 421
Query: 332 DTYFRNIPILVVPNGVQLVACG 353
+T +N IL++ G Q G
Sbjct: 422 NTATKNEDILLIGAGGQFSVSG 443
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 8/156 (5%)
Query: 227 LEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLG----HCSLQSGDKELLPRRVVALDG 282
L I ++ G++H A+ + VY WGL GQ + L+ G + P + L
Sbjct: 250 LYNIKYIASGDFHCFAIDHSHNVYAWGLNQYGQCALTGDNGELEDGSVLMKPTLIPELSH 309
Query: 283 IFIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTY--FRNIPI 340
IK++A G H+ ALT G +YAWG ++G+ S + T+ F +
Sbjct: 310 KGIKEIAAGEHHTLALTEDGQVYAWGRYDMKEIGIPKDKLPKSTFKINTGTHGSFSFLQN 369
Query: 341 LVVPNGVQLVACGHSHTLVYMRDGRIHGWGY-NSYG 375
L ++ + G H+ DG ++ WG+ +YG
Sbjct: 370 LFAVK-IKTIGVGSHHSFAVTEDGVVYAWGFAETYG 404
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 108/285 (37%), Gaps = 95/285 (33%)
Query: 167 TIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVI------------ 214
T I + G +H +AL + +WG N+ LGR TC+ + + I
Sbjct: 65 TKIVDFAVGGMHTLALDGKNRIWSWGGNDSEVLGRD-TCQAKEVLKDIDGKNGNDDDDDD 123
Query: 215 --------KGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGL-----GSVGQL- 260
+ ++ PE E I Q++ + SAA+ NG+VY+WG G +G L
Sbjct: 124 EDGDLNEAESTPALVENLPEGE-IVQLAATDNLSAALLSNGDVYSWGCFRCNEGLLGFLR 182
Query: 261 ----------------GHCSLQSG---------DKELLP----------RRVV------A 279
HC + KE +P RR++ +
Sbjct: 183 DEIKLQKTPLKIKELKKHCPIMRSVKIILLALDSKEWMPGVNGQQYQLGRRILERHRYRS 242
Query: 280 LD----GIF-IKDVACGGVHSCALTSKGALYAWGGSQAGQLGL---------GPQTRSFS 325
L+ G++ IK +A G H A+ +YAWG +Q GQ L G +
Sbjct: 243 LEPQQFGLYNIKYIASGDFHCFAIDHSHNVYAWGLNQYGQCALTGDNGELEDGSVLMKPT 302
Query: 326 LIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVYMRDGRIHGWG 370
LIP S G++ +A G HTL DG+++ WG
Sbjct: 303 LIPELSH------------KGIKEIAAGEHHTLALTEDGQVYAWG 335
Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 88/208 (42%), Gaps = 42/208 (20%)
Query: 33 QTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVASDGTLFTWGANEFG 92
Q GR+ ER + L P+ FG N ++ IA G H A+ ++ WG N++G
Sbjct: 229 QLGRRILERHRY--RSLEPQQFGL---YNIKY--IASGDFHCFAIDHSHNVYAWGLNQYG 281
Query: 93 Q---LGDG--TEEGR--KHPEKVKQLQSEFVKSISCGAHCTAAIAEPRENDGTISTSRLW 145
Q GD E+G P + +L + +K I+ G H T A+ E DG + +
Sbjct: 282 QCALTGDNGELEDGSVLMKPTLIPELSHKGIKEIAAGEHHTLALTE----DGQV-----Y 332
Query: 146 VWGQNQ----GSNFPRLFWGAFTPNT---------------IICQVSCGSVHVVALSECG 186
WG+ G +L F NT I + GS H A++E G
Sbjct: 333 AWGRYDMKEIGIPKDKLPKSTFKINTGTHGSFSFLQNLFAVKIKTIGVGSHHSFAVTEDG 392
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVI 214
++ AWG+ E G G + + ++ P I
Sbjct: 393 VVYAWGFAETYGPGLGPSIDDVEKPTRI 420
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 61/142 (42%), Gaps = 31/142 (21%)
Query: 23 IYVWGYNHSGQTGRKGRERQLR-----IPKQLPPELFGCPAGANSRWLDIACGHEHTAAV 77
+Y WG N GQ G +L + L PEL ++ +IA G HT A+
Sbjct: 272 VYAWGLNQYGQCALTGDNGELEDGSVLMKPTLIPEL------SHKGIKEIAAGEHHTLAL 325
Query: 78 ASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQ--------LQSEF---VKSISCGAHCT 126
DG ++ WG + ++G ++ K K+ LQ+ F +K+I G+H +
Sbjct: 326 TEDGQVYAWGRYDMKEIGIPKDKLPKSTFKINTGTHGSFSFLQNLFAVKIKTIGVGSHHS 385
Query: 127 AAIAEPRENDGTISTSRLWVWG 148
A+ E DG + + WG
Sbjct: 386 FAVTE----DGVV-----YAWG 398
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRV------VALDGIFIKDVACGG 292
++ A S +V+ WG GS+ +LG + +KE+ R+ L G I D A GG
Sbjct: 16 YAKAKSTPLDVFVWGTGSMCELG-LGPSAKNKEVKRPRLNPYLTEEKLGGTKIVDFAVGG 74
Query: 293 VHSCALTSKGALYAWGGSQAGQLG 316
+H+ AL K +++WGG+ + LG
Sbjct: 75 MHTLALDGKNRIWSWGGNDSEVLG 98
Score = 33.5 bits (75), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 11/99 (11%)
Query: 2 DINEIIGETARPVDNIPAKSAIYVWGYNHSGQTGR--KGRERQLRIPKQLPPELFGCPAG 59
+INE + P+D ++VWG + G + ++++ P+ L P L G
Sbjct: 12 NINEYAKAKSTPLD-------VFVWGTGSMCELGLGPSAKNKEVKRPR-LNPYLTEEKLG 63
Query: 60 ANSRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGT 98
++ +D A G HT A+ +++WG N+ LG T
Sbjct: 64 G-TKIVDFAVGGMHTLALDGKNRIWSWGGNDSEVLGRDT 101
>sp|Q54VW7|GACGG_DICDI Rho GTPase-activating protein gacGG OS=Dictyostelium discoideum
GN=gacGG PE=3 SV=1
Length = 1203
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 134/330 (40%), Gaps = 74/330 (22%)
Query: 70 GHEHTAAVASDGTLFTWGANEFGQLGDGTE-EGRKHPEKVKQLQSEFVKSISCGAHCTAA 128
G+ H+ A+ G L+ WG N QL P K++ + ++ VKSISCG + +AA
Sbjct: 42 GYNHSLALTETGELYGWGDNRHHQLSSNKAITSIDKPIKIQVIPNQRVKSISCGGNFSAA 101
Query: 129 IAEPRENDGTISTSRLWVWGQNQGSNFPRLFWG-----AFTPNTIICQVSCGSV-----H 178
I E L+VWG L G + T ++ V+C S+
Sbjct: 102 IME---------NGLLYVWGT--------LIEGGKCTESPTKVDLLKGVTCVSIGINHCA 144
Query: 179 VVALS----ECGLLQAWGYNEYGQLG---RGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
VVA S E + WG N GQLG IT PR + +K +
Sbjct: 145 VVADSPTTPEKRSVYTWGTNRKGQLGVVGDSIT----NAPRRVTLGSKAIS--------- 191
Query: 232 QVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACG 291
V CGE +AA+ E EV+ WG Q+ CS + E++ V G I +++C
Sbjct: 192 -VCCGEEFTAAIVEGNEVFVWGYNKSRQI--CS--NNSDEIISIPVKPFLGRDIVELSCT 246
Query: 292 GVHSCALTSKGALYAWGGS-QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLV 350
+ A + G + WG + Q ++G D F N P N ++ +
Sbjct: 247 KNYIAARSGVGNVCVWGSNEQVCRIG---------------DDKFINFP-----NKIKQI 286
Query: 351 ACGHSHTLVYMRDGRIHGWGYNSYGQAANE 380
+ SH LV G I WG + Q +++
Sbjct: 287 SASTSHILVLSEKGEIFSWGNSEDNQLSHK 316
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 100/252 (39%), Gaps = 56/252 (22%)
Query: 144 LWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGI 203
L+ WG ++ S P + PN IC + G H +AL+E G L WG N + QL
Sbjct: 16 LYCWG-DKFSGKPT--FNPLIPN--ICFMDNGYNHSLALTETGELYGWGDNRHHQLSSNK 70
Query: 204 TCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHC 263
+ P I+ +++ +SCG SAA+ ENG +Y WG G G C
Sbjct: 71 AITSIDKPIKIQVIPN--------QRVKSISCGGNFSAAIMENGLLYVWGTLIEG--GKC 120
Query: 264 SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTS-------KGALYAWGGSQAGQLG 316
+ P +V L G+ + G++ CA+ + K ++Y WG ++ GQLG
Sbjct: 121 TES-------PTKVDLLKGVTCVSI---GINHCAVVADSPTTPEKRSVYTWGTNRKGQLG 170
Query: 317 LGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL------VACGHSHTLVYMRDGRIHGWG 370
+ + I P V L V CG T + + WG
Sbjct: 171 VVGDS------------------ITNAPRRVTLGSKAISVCCGEEFTAAIVEGNEVFVWG 212
Query: 371 YNSYGQAANEKS 382
YN Q + S
Sbjct: 213 YNKSRQICSNNS 224
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 89/209 (42%), Gaps = 42/209 (20%)
Query: 67 IACGHEHTAAVASDGT------LFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSIS 120
++ G H A VA T ++TWG N GQLG + P +V L S+ + S+
Sbjct: 136 VSIGINHCAVVADSPTTPEKRSVYTWGTNRKGQLGVVGDSITNAPRRVT-LGSKAI-SVC 193
Query: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQNQG-----SNFPRLFWGAFTP--NTIICQVS 173
CG TAAI E E ++VWG N+ +N + P I ++S
Sbjct: 194 CGEEFTAAIVEGNE---------VFVWGYNKSRQICSNNSDEIISIPVKPFLGRDIVELS 244
Query: 174 CGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQV 233
C ++ A S G + WG NE Q R+ G KF++ KI Q+
Sbjct: 245 CTKNYIAARSGVGNVCVWGSNE-------------QVCRI--GDDKFINFP---NKIKQI 286
Query: 234 SCGEYHSAAVSENGEVYTWGLGSVGQLGH 262
S H +SE GE+++WG QL H
Sbjct: 287 SASTSHILVLSEKGEIFSWGNSEDNQLSH 315
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 84/189 (44%), Gaps = 27/189 (14%)
Query: 18 PAKSAIYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAV 77
P K ++Y WG N GQ G G + P+++ S+ + + CG E TAA+
Sbjct: 153 PEKRSVYTWGTNRKGQLGVVG-DSITNAPRRV---------TLGSKAISVCCGEEFTAAI 202
Query: 78 ASDGTLFTWGANEFGQL-GDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAEPREND 136
+F WG N+ Q+ + ++E P VK + +SC + AA R
Sbjct: 203 VEGNEVFVWGYNKSRQICSNNSDEIISIP--VKPFLGRDIVELSCTKNYIAA----RSGV 256
Query: 137 GTISTSRLWVWGQNQGSNFPRLFWGAFT--PNTIICQVSCGSVHVVALSECGLLQAWGYN 194
G + VWG N+ R+ F PN I Q+S + H++ LSE G + +WG +
Sbjct: 257 GNVC-----VWGSNE--QVCRIGDDKFINFPNK-IKQISASTSHILVLSEKGEIFSWGNS 308
Query: 195 EYGQLGRGI 203
E QL +
Sbjct: 309 EDNQLSHKL 317
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 58/130 (44%), Gaps = 18/130 (13%)
Query: 291 GGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG-VQL 349
G HS ALT G LY WG ++ QL S + I I V+PN V+
Sbjct: 42 GYNHSLALTETGELYGWGDNRHHQLSSNKAITSID----------KPIKIQVIPNQRVKS 91
Query: 350 VACGHSHTLVYMRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSA 409
++CG + + M +G ++ WG G E P+ VD G V ++ G H A
Sbjct: 92 ISCGGNFSAAIMENGLLYVWGTLIEGGKCTES------PTKVDLLKG-VTCVSIGINHCA 144
Query: 410 VLADACSLKE 419
V+AD+ + E
Sbjct: 145 VVADSPTTPE 154
Score = 39.3 bits (90), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 27/116 (23%)
Query: 301 KGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQLVACGHSHTLVY 360
+G LY WG +G+ P LIPN + + G++H+L
Sbjct: 13 QGVLYCWGDKFSGKPTFNP------LIPN-----------------ICFMDNGYNHSLAL 49
Query: 361 MRDGRIHGWGYNSYGQAANEKSTYAWYPSPVDWCV---GEVRKLAAGGGHSAVLAD 413
G ++GWG N + Q ++ K+ + P+ V V+ ++ GG SA + +
Sbjct: 50 TETGELYGWGDNRHHQLSSNKAITS-IDKPIKIQVIPNQRVKSISCGGNFSAAIME 104
>sp|Q8IS20|GEFC_DICDI Ras guanine nucleotide exchange factor C OS=Dictyostelium
discoideum GN=gefC PE=2 SV=1
Length = 1457
Score = 75.1 bits (183), Expect = 1e-12, Method: Composition-based stats.
Identities = 69/262 (26%), Positives = 107/262 (40%), Gaps = 65/262 (24%)
Query: 67 IACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCT 126
IA G ++TAA+ G L+ WG NE G+LG G R+ P +V +L++E V +I+C + +
Sbjct: 419 IATGVKNTAALTEWGELYMWGINEHGELGLGDTIDRRTPTRVIRLKNEVVSTIACSSTHS 478
Query: 127 AAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAF-----------TPNTI------- 168
A E + +++VWGQ+ + + +PN
Sbjct: 479 ACYTE---------SGKMYVWGQSDETGKIQAIPSPLPIHSYLDREIKSPNGGGVGGFFG 529
Query: 169 ----ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEA 224
I Q++CG + L++ G + W I G L A
Sbjct: 530 GGGKIKQLACGQRCIAVLTQMGEVFMWE---------------------IPGIPIPLRNA 568
Query: 225 PELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVAL---- 280
E + + G +H ++++GEV T G GQLG D E P V L
Sbjct: 569 LENHSVRNIVMGNFHLVCLTDSGEVVTIGRNKTGQLGRT-----DAENEPGIVKQLSFDP 623
Query: 281 DGI----FIKDVACGGVHSCAL 298
DG+ F+ +A G HS AL
Sbjct: 624 DGLNSDEFVVSIAAGEFHSVAL 645
Score = 68.9 bits (167), Expect = 8e-11, Method: Composition-based stats.
Identities = 58/204 (28%), Positives = 84/204 (41%), Gaps = 55/204 (26%)
Query: 220 FLDEAPELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHC---------------- 263
FL+ +P L I QV+ G YH ++E G V+TWG S GQLG+
Sbjct: 326 FLENSP-LNTIKQVALGNYHIVLLTEGGNVWTWGSNSNGQLGYLVDTQQQQQQQLQQQQS 384
Query: 264 -------------SLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWGGS 310
S S P+ V + +K +A G ++ ALT G LY WG +
Sbjct: 385 MSSLQPSASSSSPSSSSLQTTCTPKMV---EIKCVKYIATGVKNTAALTEWGELYMWGIN 441
Query: 311 QAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV---PNGVQLVACGHSHTLVYMRDGRIH 367
+ G+LGLG DT R P V+ V +AC +H+ Y G+++
Sbjct: 442 EHGELGLG-------------DTIDRRTPTRVIRLKNEVVSTIACSSTHSACYTESGKMY 488
Query: 368 GWGYNSYGQAANEKSTYAWYPSPV 391
WG ++E PSP+
Sbjct: 489 VWG------QSDETGKIQAIPSPL 506
Score = 67.8 bits (164), Expect = 2e-10, Method: Composition-based stats.
Identities = 48/182 (26%), Positives = 74/182 (40%), Gaps = 53/182 (29%)
Query: 164 TPNTIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGI-------------------- 203
+P I QV+ G+ H+V L+E G + WG N GQLG +
Sbjct: 330 SPLNTIKQVALGNYHIVLLTEGGNVWTWGSNSNGQLGYLVDTQQQQQQQLQQQQSMSSLQ 389
Query: 204 ---------------TCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSENGE 248
TC P+++ E++ + ++ G ++AA++E GE
Sbjct: 390 PSASSSSPSSSSLQTTCT----PKMV-----------EIKCVKYIATGVKNTAALTEWGE 434
Query: 249 VYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCALTSKGALYAWG 308
+Y WG+ G+LG L P RV+ L + +AC HS T G +Y WG
Sbjct: 435 LYMWGINEHGELG---LGDTIDRRTPTRVIRLKNEVVSTIACSSTHSACYTESGKMYVWG 491
Query: 309 GS 310
S
Sbjct: 492 QS 493
Score = 57.4 bits (137), Expect = 2e-07, Method: Composition-based stats.
Identities = 54/244 (22%), Positives = 99/244 (40%), Gaps = 50/244 (20%)
Query: 23 IYVWGYNHSGQTG------RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAA 76
+Y+WG N G+ G R+ R +R+ ++ IAC H+A
Sbjct: 435 LYMWGINEHGELGLGDTIDRRTPTRVIRLKNEVVST--------------IACSSTHSAC 480
Query: 77 VASDGTLFTWG-ANEFGQLGDGTEEGRKHPEKVKQLQS-------------EFVKSISCG 122
G ++ WG ++E G++ H ++++S +K ++CG
Sbjct: 481 YTESGKMYVWGQSDETGKIQAIPSPLPIHSYLDREIKSPNGGGVGGFFGGGGKIKQLACG 540
Query: 123 AHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVAL 182
C A + + E +++W + P A N + + G+ H+V L
Sbjct: 541 QRCIAVLTQMGE---------VFMW---EIPGIPIPLRNALE-NHSVRNIVMGNFHLVCL 587
Query: 183 SECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAA 242
++ G + G N+ GQLGR + P ++K + D E + ++ GE+HS A
Sbjct: 588 TDSGEVVTIGRNKTGQLGR---TDAENEPGIVKQLSFDPDGLNSDEFVVSIAAGEFHSVA 644
Query: 243 VSEN 246
+ EN
Sbjct: 645 LVEN 648
Score = 55.5 bits (132), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 20/147 (13%)
Query: 172 VSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKIT 231
++ G + AL+E G L WG NE+G+LG G T + RVI+ + E ++
Sbjct: 419 IATGVKNTAALTEWGELYMWGINEHGELGLGDTIDRRTPTRVIR---------LKNEVVS 469
Query: 232 QVSCGEYHSAAVSENGEVYTWGLG-SVGQLGHCSLQSGDKELLPRRVVALDGIF------ 284
++C HSA +E+G++Y WG G++ L R + + +G
Sbjct: 470 TIACSSTHSACYTESGKMYVWGQSDETGKIQAIPSPLPIHSYLDREIKSPNGGGVGGFFG 529
Query: 285 ----IKDVACGGVHSCALTSKGALYAW 307
IK +ACG LT G ++ W
Sbjct: 530 GGGKIKQLACGQRCIAVLTQMGEVFMW 556
>sp|Q96I51|WBS16_HUMAN Williams-Beuren syndrome chromosomal region 16 protein OS=Homo
sapiens GN=WBSCR16 PE=1 SV=2
Length = 464
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 144/361 (39%), Gaps = 53/361 (14%)
Query: 25 VWGY--NHSGQTG----RKGRERQLRIPKQLPPELFGCPAGANSRWLDIACGHEHTAAVA 78
VWG N Q G RK + R + P +R L ++CG H+ +
Sbjct: 131 VWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVSLPLDRPQETRVLQVSCGRAHSLVLT 190
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPE--KVKQLQSEF---VKSISCGAHCTAAIAEPR 133
+F+ G N +GQ G E + E +V ++Q +F V ++CG + + +
Sbjct: 191 DREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQ-DFDGQVVQVACGQDHSLFLTDKG 249
Query: 134 E-------NDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVALSECG 186
E DG G ++ P G +I QV+ +A+S G
Sbjct: 250 EVYSCGWGADGQTGL------GHYNITSSPTKLGGDLAGVNVI-QVATYGDCCLAVSADG 302
Query: 187 LLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPELEKITQVSCGEYHSAAVSEN 246
L WG +EY QL + PR + + K+ Q +CG A ++
Sbjct: 303 GLFGWGNSEYLQLASVTDSTQVNVPRCL--------HFSGVGKVRQAACGGTGCAVLNGE 354
Query: 247 GEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDG----IFIKDVACGGVHSCALTSKG 302
G V+ WG G +G+ G ++S E++P + L I + + CG H ALT+KG
Sbjct: 355 GHVFVWGYGILGK-GPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLSHFAALTNKG 413
Query: 303 ALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL-VACGHSHTLVYM 361
L+ WG + G LG+G D YF P V G + VACG H +
Sbjct: 414 ELFVWGKNIRGCLGIG----------RLEDQYF---PWRVTMPGEPVDVACGVDHMVTLA 460
Query: 362 R 362
+
Sbjct: 461 K 461
Score = 72.0 bits (175), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 104/219 (47%), Gaps = 28/219 (12%)
Query: 167 TIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDEAPE 226
T + QVSCG H + L++ + + G N YGQ GR + I + + +
Sbjct: 174 TRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVV------ENEIYSESHRVHRMQD 227
Query: 227 LE-KITQVSCGEYHSAAVSENGEVYTWGLGSVGQ--LGHCSLQSGDKELLPRRVVALDGI 283
+ ++ QV+CG+ HS +++ GEVY+ G G+ GQ LGH ++ S +L L G+
Sbjct: 228 FDGQVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKLGGD----LAGV 283
Query: 284 FIKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVV 343
+ VA G A+++ G L+ WG S+ QL + +D+ N+P +
Sbjct: 284 NVIQVATYGDCCLAVSADGGLFGWGNSEYLQLA------------SVTDSTQVNVPRCLH 331
Query: 344 PNGVQLV---ACGHSHTLVYMRDGRIHGWGYNSYGQAAN 379
+GV V ACG + V +G + WGY G+ N
Sbjct: 332 FSGVGKVRQAACGGTGCAVLNGEGHVFVWGYGILGKGPN 370
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 12/113 (10%)
Query: 23 IYVWGYNHSGQTGRKGRERQLRIPKQLPPELFGC----PAGANSRWLDIACGHEHTAAVA 78
++VWGY G G+ + +P+ +PP LFG P SR I CG H AA+
Sbjct: 357 VFVWGY---GILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSR---IRCGLSHFAALT 410
Query: 79 SDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISCGAHCTAAIAE 131
+ G LF WG N G LG G E + P +V + E V ++CG +A+
Sbjct: 411 NKGELFVWGKNIRGCLGIGRLEDQYFPWRVT-MPGEPV-DVACGVDHMVTLAK 461
>sp|P21827|RCC1_YEAST Guanine nucleotide exchange factor SRM1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SRM1 PE=1 SV=1
Length = 482
Score = 72.4 bits (176), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 115/296 (38%), Gaps = 45/296 (15%)
Query: 148 GQNQGSNFPRLFWGAFTPN--TIICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITC 205
+N+ PRL F P I + G +H +AL E + +WG N+ G LGR +
Sbjct: 65 AKNKEVKRPRL--NPFLPRDEAKIISFAVGGMHTLALDEESNVWSWGCNDVGALGRDTSN 122
Query: 206 --EGLQGPRVIKGYAKFLDEAPELE------------------KITQVSCGEYHSAAVSE 245
E L+ + ELE K+ Q++ + S A+
Sbjct: 123 AKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLAEGHKVVQLAATDNMSCALFS 182
Query: 246 NGEVYTWGLGSVGQLGHCSLQSGDK-ELLPRRVVALDGIFIKDVACGGVHSCALTSKGAL 304
NGEVY WG + Q K + P +V I +A G H L +G +
Sbjct: 183 NGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMV 242
Query: 305 YAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNG---VQLVACGHSHTLVYM 361
+AWG Q QLG R FR + P G V+ +A G +H
Sbjct: 243 FAWGNGQQNQLGRKVMER------------FRLKTLDPRPFGLRHVKYIASGENHCFALT 290
Query: 362 RDGRIHGWGYNSYGQ--AANEKSTYAWYPSPVDWCVGE---VRKLAAGGGHSAVLA 412
+D ++ WG N +GQ + + A P + + +R +AAG HS +L+
Sbjct: 291 KDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNVVIRSIAAGEHHSLILS 346
Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 139/369 (37%), Gaps = 60/369 (16%)
Query: 62 SRWLDIACGHEHTAAVASDGTLFTWGANEFGQLGDGTEEGRKHPEKVKQLQSEFVKSISC 121
++ + A G HT A+ + +++WG N+ G LG T ++ + + S +
Sbjct: 84 AKIISFAVGGMHTLALDEESNVWSWGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDL 143
Query: 122 GAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTIICQVSCGSVHVVA 181
+ PRE+ FP L G + Q++ A
Sbjct: 144 NELESTPAKIPRES-------------------FPPLAEGH-----KVVQLAATDNMSCA 179
Query: 182 LSECGLLQAWGYNEYGQLGRGITCEGLQ---GPRVIKGYAKFLDEAPELEKITQVSCGEY 238
L G + AWG + G + ++ P + ++K+ I Q++ G+
Sbjct: 180 LFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKY--------NIVQLAPGKD 231
Query: 239 HSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPRRVVALDGIFIKDVACGGVHSCAL 298
H + E G V+ WG G QLG ++ + L R L +K +A G H AL
Sbjct: 232 HILFLDEEGMVFAWGNGQQNQLGRKVMERFRLKTLDPRPFGLR--HVKYIASGENHCFAL 289
Query: 299 TSKGALYAWGGSQAGQLGLGPQTRSFSLIPNESDTYFRNIPILVVPNGVQL--VACGHSH 356
T L +WG +Q GQ G+ +L+ L +P+ V + +A G H
Sbjct: 290 TKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKR--------LALPDNVVIRSIAAGEHH 341
Query: 357 TLVYMRDGRIHGWGYNSYGQAANEKSTYAWY------------PSPVDW-CVGEVRKLAA 403
+L+ +DG ++ G + K Y P P V + + +AA
Sbjct: 342 SLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVPKFKSVAA 401
Query: 404 GGGHSAVLA 412
G HS +A
Sbjct: 402 GSHHSVAVA 410
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 149/385 (38%), Gaps = 73/385 (18%)
Query: 20 KSAIYVWGYNHSGQTGR--KGRERQLR--------------------IPKQLPPELFGCP 57
+S ++ WG N G GR + QL+ P ++P E F P
Sbjct: 102 ESNVWSWGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFP-P 160
Query: 58 AGANSRWLDIACGHEHTAAVASDGTLFTWGA---NEFGQLGDGTEEGR--KHPEKVKQLQ 112
+ + +A + A+ S+G ++ WG NE G LG ++ + K P KV
Sbjct: 161 LAEGHKVVQLAATDNMSCALFSNGEVYAWGTFRCNE-GILGFYQDKIKIQKTPWKVPTFS 219
Query: 113 SEFVKSISCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNFPRLFWGAFTPNTI---- 168
+ ++ G + E ++ WG Q + R F T+
Sbjct: 220 KYNIVQLAPGKDHILFLDE---------EGMVFAWGNGQQNQLGRKVMERFRLKTLDPRP 270
Query: 169 -----ICQVSCGSVHVVALSECGLLQAWGYNEYGQLGRGITCEGLQGPRVIKGYAKFLDE 223
+ ++ G H AL++ L +WG N++GQ G E G V K L
Sbjct: 271 FGLRHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVE--DGALVTKPKRLAL-- 326
Query: 224 APELEKITQVSCGEYHSAAVSENGEVYTWGLGSVGQLGHCSLQSGDKELLPR-------- 275
P+ I ++ GE+HS +S++G++Y+ G + ++G K+ LP
Sbjct: 327 -PDNVVIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGI------PKDNLPEYTYKDVHG 379
Query: 276 --RVVALDGIF-----IKDVACGGVHSCALTSKGALYAWGGSQAGQLGLGPQTRSFSLIP 328
R V L K VA G HS A+ G Y+WG + +GLGP +
Sbjct: 380 KARAVPLPTKLNNVPKFKSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLGPFEDDTEVPT 439
Query: 329 NESDTYFRNIPILVVPNGVQLVACG 353
+T ++ I++V G Q G
Sbjct: 440 RIKNTATQDHNIILVGCGGQFSVSG 464
Score = 38.5 bits (88), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 248 EVYTWGLGSVGQLGHCSLQSGDKELLPRR--VVALDGIFIKDVACGGVHSCALTSKGALY 305
+++ WG GS+ +LG L + PR + D I A GG+H+ AL + ++
Sbjct: 47 DIFCWGTGSMCELGLGPLAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDEESNVW 106
Query: 306 AWGGSQAGQLG 316
+WG + G LG
Sbjct: 107 SWGCNDVGALG 117
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 190,663,273
Number of Sequences: 539616
Number of extensions: 8254937
Number of successful extensions: 18704
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 16704
Number of HSP's gapped (non-prelim): 554
length of query: 477
length of database: 191,569,459
effective HSP length: 121
effective length of query: 356
effective length of database: 126,275,923
effective search space: 44954228588
effective search space used: 44954228588
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)