BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011801
(477 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1IAX|A Chain A, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAX|B Chain B, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAY|A Chain A, Crystal Structure Of Acc Synthase Complexed With Cofactor
Plp And Inhibitor Avg
Length = 428
Score = 675 bits (1741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/429 (72%), Positives = 369/429 (86%), Gaps = 4/429 (0%)
Query: 3 ILSKIATNNGHGEDSAYFDGWKAFDRNPFHPTQNPGGVIQLGLAENQLCFDLIKDWITKN 62
ILSK+ATN HGE+S YFDGWKA+D +PFHP +NP GVIQ+GLAENQLC DLI+DWI +N
Sbjct: 1 ILSKLATNEEHGENSPYFDGWKAYDSDPFHPLKNPNGVIQMGLAENQLCLDLIEDWIKRN 60
Query: 63 PYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATG 122
P SIC+ EG++ FK IA FQDYHGLPEFR+A+AKFM K RGGRV FDP+R+VM GGATG
Sbjct: 61 PKGSICS-EGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATG 119
Query: 123 ANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAY 182
ANE I+FCLA+PGDAFLVPSPYY AF+RDL WRTGVQ++P+HC+ SNNFKIT +A++ AY
Sbjct: 120 ANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAY 179
Query: 183 ERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPK 242
E AQ+++I +KGLI+TNPSNPLGTTLD+DTLKS++SF N NIHLVCDEIYAATVF +P+
Sbjct: 180 ENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQ 239
Query: 243 FTSVAEVIQEMD---CNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGL 299
F S+AE++ E + CN+DL+HI+YSLSKDMGLPGFRVGI+YSFND VVNC RKMSSFGL
Sbjct: 240 FVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARKMSSFGL 299
Query: 300 VSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMD 359
VS+QTQY LA+MLSD++FVDNFL E++ RL KRH +FT GLE VGI CLK+NAGLF WMD
Sbjct: 300 VSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVVGIKCLKNNAGLFCWMD 359
Query: 360 LRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNR 419
LR LL+E T + E++LWR I+NDVKLNVSPGSSF+C EPGWFRVCFANMDD T+ +AL R
Sbjct: 360 LRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALAR 419
Query: 420 IAAFVQQDK 428
I FV +K
Sbjct: 420 IRRFVGVEK 428
>pdb|1YNU|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
L-Vinylglycine
Length = 473
Score = 543 bits (1398), Expect = e-154, Method: Compositional matrix adjust.
Identities = 238/429 (55%), Positives = 322/429 (75%), Gaps = 5/429 (1%)
Query: 1 MGILSKIATNNGHGEDSAYFDGWKAFDRNPFHPTQNPGGVIQLGLAENQLCFDLIKDWIT 60
M +LS+ AT N HG+DS+YF GW+ +++NP+H N G+IQ+GLAENQLCFDL++ W+
Sbjct: 1 MRMLSRNATFNSHGQDSSYFLGWQEYEKNPYHEVHNTNGIIQMGLAENQLCFDLLESWLA 60
Query: 61 KNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGA 120
KNP A+ G +F ++A+FQDYHGLP F++A+ FM + RG +VTFDP+ +V+ GA
Sbjct: 61 KNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGA 120
Query: 121 TGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEA 180
T ANE +FCLA+PG+A L+P+PYY FDRDL WRTGV+IVP+HC SN F+IT ALE
Sbjct: 121 TSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEE 180
Query: 181 AYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSS 240
AY+ A++ ++ +KG+++TNPSNPLGTT+ R+ L L+SF+ DK IHL+ DEIY+ T FSS
Sbjct: 181 AYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSS 240
Query: 241 PKFTSVAEVIQEMDCNRD-----LIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMS 295
P F SV EV+++ +C+ + +H++YSLSKD+GLPGFRVG +YS +D VV KMS
Sbjct: 241 PSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS 300
Query: 296 SFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLF 355
SFGLVSSQTQ+LL++MLSD + N++ E KRL +R GL++ GI+CL NAGLF
Sbjct: 301 SFGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNGNAGLF 360
Query: 356 FWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQV 415
W+D+RHLL+ T E E+ LW+ IV +V LN+SPGSS CTEPGWFRVCFAN+ + TL +
Sbjct: 361 CWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDL 420
Query: 416 ALNRIAAFV 424
A+ R+ AFV
Sbjct: 421 AMQRLKAFV 429
>pdb|1M7Y|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L-
Aminoethoxyvinylglycine
pdb|1M4N|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
[2-(Amino-
Oxy)ethyl](5'-Deoxyadenosin-5'-Yl)(Methyl)sulfonium
Length = 435
Score = 542 bits (1397), Expect = e-154, Method: Compositional matrix adjust.
Identities = 238/431 (55%), Positives = 323/431 (74%), Gaps = 5/431 (1%)
Query: 1 MGILSKIATNNGHGEDSAYFDGWKAFDRNPFHPTQNPGGVIQLGLAENQLCFDLIKDWIT 60
M +LS+ AT N HG+DS+YF GW+ +++NP+H N G+IQ+GLAENQLCFDL++ W+
Sbjct: 1 MRMLSRNATFNSHGQDSSYFLGWQEYEKNPYHEVHNTNGIIQMGLAENQLCFDLLESWLA 60
Query: 61 KNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGA 120
KNP A+ G +F ++A+FQDYHGLP F++A+ FM + RG +VTFDP+ +V+ GA
Sbjct: 61 KNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGA 120
Query: 121 TGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEA 180
T ANE +FCLA+PG+A L+P+PYY FDRDL WRTGV+IVP+HC SN F+IT ALE
Sbjct: 121 TSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEE 180
Query: 181 AYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSS 240
AY+ A++ ++ +KG+++TNPSNPLGTT+ R+ L L+SF+ DK IHL+ DEIY+ T FSS
Sbjct: 181 AYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSS 240
Query: 241 PKFTSVAEVIQEMDCNRD-----LIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMS 295
P F SV EV+++ +C+ + +H++YSLSKD+GLPGFRVG +YS +D VV KMS
Sbjct: 241 PSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS 300
Query: 296 SFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLF 355
SFGLVSSQTQ+LL++MLSD + N++ E KRL +R GL++ GI+CL NAGLF
Sbjct: 301 SFGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNGNAGLF 360
Query: 356 FWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQV 415
W+D+RHLL+ T E E+ LW+ IV +V LN+SPGSS CTEPGWFRVCFAN+ + TL +
Sbjct: 361 CWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDL 420
Query: 416 ALNRIAAFVQQ 426
A+ R+ AFV +
Sbjct: 421 AMQRLKAFVGE 431
>pdb|1B8G|A Chain A, 1-aminocyclopropane-1-carboxylate Synthase
pdb|1B8G|B Chain B, 1-aminocyclopropane-1-carboxylate Synthase
Length = 429
Score = 541 bits (1394), Expect = e-154, Method: Compositional matrix adjust.
Identities = 237/429 (55%), Positives = 322/429 (75%), Gaps = 5/429 (1%)
Query: 3 ILSKIATNNGHGEDSAYFDGWKAFDRNPFHPTQNPGGVIQLGLAENQLCFDLIKDWITKN 62
+LS+ AT N HG+DS+YF GW+ +++NP+H N G+IQ+GLAENQLCFDL++ W+ KN
Sbjct: 1 MLSRNATFNSHGQDSSYFLGWQEYEKNPYHEVHNTNGIIQMGLAENQLCFDLLESWLAKN 60
Query: 63 PYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATG 122
P A+ G +F ++A+FQDYHGLP F++A+ FM + RG +VTFDP+ +V+ GAT
Sbjct: 61 PEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATS 120
Query: 123 ANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAY 182
ANE +FCLA+PG+A L+P+PYY FDRDL WRTGV+IVP+HC SN F+IT ALE AY
Sbjct: 121 ANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAY 180
Query: 183 ERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPK 242
+ A++ ++ +KG+++TNPSNPLGTT+ R+ L L+SF+ DK IHL+ DEIY+ T FSSP
Sbjct: 181 QEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPS 240
Query: 243 FTSVAEVIQEMDCNRD-----LIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSF 297
F SV EV+++ +C+ + +H++YSLSKD+GLPGFRVG +YS +D VV KMSSF
Sbjct: 241 FISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSF 300
Query: 298 GLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFW 357
GLVSSQTQ+LL++MLSD + N++ E KRL +R GL++ GI+CL NAGLF W
Sbjct: 301 GLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNGNAGLFCW 360
Query: 358 MDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVAL 417
+D+RHLL+ T E E+ LW+ IV +V LN+SPGSS CTEPGWFRVCFAN+ + TL +A+
Sbjct: 361 VDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAM 420
Query: 418 NRIAAFVQQ 426
R+ AFV +
Sbjct: 421 QRLKAFVGE 429
>pdb|3PIU|A Chain A, High-Resolution Structure Of Native Malus Domestica Acc
Synthase
Length = 410
Score = 516 bits (1329), Expect = e-146, Method: Compositional matrix adjust.
Identities = 228/410 (55%), Positives = 307/410 (74%), Gaps = 3/410 (0%)
Query: 18 AYFDGWKAFDRNPFHPTQNPGGVIQLGLAENQLCFDLIKDWITKNPYASICTAEGVEVFK 77
+YF GW+ +++NP+H N G+IQ+GLAENQLCFDL++ W+ KNP A+ G +F
Sbjct: 1 SYFLGWQEYEKNPYHEVHNTNGIIQMGLAENQLCFDLLESWLAKNPEAAAFKKNGESIFA 60
Query: 78 DIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDA 137
++A+FQDYHGLP F++A+ FM + RG +VTFDP+ +V+ GAT ANE +FCLA+PG+A
Sbjct: 61 ELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEA 120
Query: 138 FLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLII 197
L+P+PYY FDRDL WRTGV+IVP+HC SN F+IT ALE AY+ A++ ++ +KG+++
Sbjct: 121 VLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLV 180
Query: 198 TNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNR 257
TNPSNPLGTT+ R+ L L+SF+ DK IHL+ DEIY+ T FSSP F SV EV+++ R
Sbjct: 181 TNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDEVWQR 240
Query: 258 DLIHIIYSLS-KDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDE 316
+H++YSLS KD+GLPGFRVG +YS +D VV KMSSFGLVSSQTQ+LL++MLSD +
Sbjct: 241 --VHVVYSLSXKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDKK 298
Query: 317 FVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALW 376
N++ E KRL +R GL++ GI+CL NAGLF W+D+RHLL+ T E E+ LW
Sbjct: 299 LTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNGNAGLFCWVDMRHLLRSNTFEAEMELW 358
Query: 377 RTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQQ 426
+ IV +V LN+SPGSS CTEPGWFRVCFAN+ + TL +A+ R+ AFV +
Sbjct: 359 KKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAFVGE 408
>pdb|1O4S|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
pdb|1O4S|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
Length = 389
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 167/347 (48%), Gaps = 38/347 (10%)
Query: 82 FQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVP 141
+ D G+ E R+ +AK +G+ ++ PD++V+ GA A L +PGD +V
Sbjct: 74 YTDPRGIYELREGIAKRIGERYKKDIS--PDQVVVTNGAKQALFNAFMALLDPGDEVIVF 131
Query: 142 SPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPS 201
SP + ++ + G V V +S NF+ + E +E K ++I +P+
Sbjct: 132 SPVWVSYIPQIILAGGTVNV-VETFMSKNFQPSLEEVEGLLVG------KTKAVLINSPN 184
Query: 202 NPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIH 261
NP G R+ L+ LV +N +++ DE+Y + V++ +FTS+ +V + D
Sbjct: 185 NPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTD-EFTSILDVSEGFD------R 237
Query: 262 IIY--SLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSF--GLVSSQTQYLLASMLSDDEF 317
I+Y SK + G+RVG + S ++ V K+ S +++ QY L D
Sbjct: 238 IVYINGFSKSHSMTGWRVGYLIS-SEKVATAVSKIQSHTTSCINTVAQYAALKALEVD-- 294
Query: 318 VDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWR 377
++++V+T K +R + + L+++G+ ++ + + +R ++
Sbjct: 295 -NSYMVQTFK---ERKNFVVERLKKMGVKFVEPEGAFYLFFKVRG--------DDVKFCE 342
Query: 378 TIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFV 424
++ + K+ + PGS+F +PG+ R+ FA + L AL+RI F+
Sbjct: 343 RLLEEKKVALVPGSAF--LKPGFVRLSFAT-SIERLTEALDRIEDFL 386
>pdb|3TCM|A Chain A, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
pdb|3TCM|B Chain B, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
Length = 500
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 158/367 (43%), Gaps = 36/367 (9%)
Query: 83 QDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPS 142
Q HGL R A+A + G D D + G + G + ++ + N D LVP
Sbjct: 134 QGIHGL---RDAIASGIASRDGFPANAD-DIFLTDGASPGVHLMMQLLIRNEKDGILVPI 189
Query: 143 PYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSN 202
P Y + ++ G +VP + + S + + ++ E A+ IN++ L++ NP N
Sbjct: 190 PQYPLYSASIALHGGA-LVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGN 248
Query: 203 PLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVF-SSPKFTSVAEVIQEMDC-NRDLI 260
P G L + +V F ++ + L+ DE+Y ++ + KF S ++++ + DL
Sbjct: 249 PTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLP 308
Query: 261 HIIY-SLSKD-MGLPGFRVGI--VYSFNDTVVNCGRKMSSFGLVSSQTQYLLASML---- 312
+ Y S+SK G G R G + F+ V K++S L S+ T +LAS++
Sbjct: 309 LVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIYKIASVNLCSNITGQILASLVMNPP 368
Query: 313 --SDDEFV------DNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLL 364
SD+ + D L ++R H F K LE GI C ++ ++ + + L
Sbjct: 369 KASDESYASYKAEKDGILASLARRAKALEHAFNK-LE--GITCNEAEGAMYVFPQI--CL 423
Query: 365 KEKTLEGEIALWRT--------IVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVA 416
+K +E A + ++ + V PGS F W C +D +
Sbjct: 424 PQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPAV 483
Query: 417 LNRIAAF 423
++R F
Sbjct: 484 ISRFTVF 490
>pdb|2GB3|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|C Chain C, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|D Chain D, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|E Chain E, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|F Chain F, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
Length = 409
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 124/281 (44%), Gaps = 23/281 (8%)
Query: 78 DIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDA 137
++ + G+ E R+A A + R RV P+ +++ G + A +ANPGD
Sbjct: 71 EVVYYSHSAGIWELREAFASYYK--RRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDE 128
Query: 138 FLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLII 197
LV P+YA ++ + GV+++PV F I + ER KG+++
Sbjct: 129 ILVLEPFYANYN-AFAKIAGVKLIPVTRRXEEGFAIPQNLESFINERT-------KGIVL 180
Query: 198 TNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNR 257
+NP NP G +D + LV + L+ DE+Y+ VF E +
Sbjct: 181 SNPCNPTGVVYGKDEXRYLVEIAERHGLFLIVDEVYSEIVFR-------GEFASALSIES 233
Query: 258 DLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYL--LASMLSDD 315
D + +I S+S G RVG + + N+ +++ K++ L + + + + DD
Sbjct: 234 DKVVVIDSVSXKFSACGARVGCLITRNEELISHAXKLAQGRLAPPLLEQIGSVGLLNLDD 293
Query: 316 EFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFF 356
F D F+ ET + +R K LE+ G+ +G F+
Sbjct: 294 SFFD-FVRETYR---ERVETVLKKLEEHGLKRFTKPSGAFY 330
>pdb|1B5O|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
pdb|1B5O|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
Length = 385
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 148/346 (42%), Gaps = 46/346 (13%)
Query: 87 GLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYA 146
G+PE R+A+A+ + G VT + + IV GG+ L L +PGD +V SPY+
Sbjct: 69 GIPELREALAEKFRRENGLSVTPE-ETIVTVGGSQALFNLFQAIL-DPGDEVIVLSPYWV 126
Query: 147 AFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEA-SINIKGLIITNPSNPLG 205
++ + + GV +V V + E ER + A + K L++ +P+NP G
Sbjct: 127 SYPEMVRFAGGV-VVEVET-------LPEEGFVPDPERVRRAITPRTKALVVNSPNNPTG 178
Query: 206 TTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYS 265
++ L++L + + +LV DEIY ++ F S V E +
Sbjct: 179 AVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHF-SPGRVAPEHTLT------VNG 231
Query: 266 LSKDMGLPGFRVGIVYSFNDTVVNCGRK--MSSFGLVSSQT--------QYLLASMLSDD 315
+K + G+R+G CG K + + VSSQ+ Q+ L++
Sbjct: 232 AAKAFAMTGWRIGYA---------CGPKEVIKAMASVSSQSTTSPDTIAQWATLEALTNQ 282
Query: 316 EFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIAL 375
E F+ + +R +GL +G+ ++ + + MD + ++ E L
Sbjct: 283 EASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPDEVRAAERLL 342
Query: 376 WRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIA 421
+ + V PG+ F G R+ +A +++ L+ AL R A
Sbjct: 343 ------EAGVAVVPGTDFAAF--GHVRLSYATSEEN-LRKALERFA 379
>pdb|1BKG|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|C Chain C, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|D Chain D, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
Length = 385
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 147/346 (42%), Gaps = 46/346 (13%)
Query: 87 GLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYA 146
G+PE R+A+A+ + G VT + + +GG N + + +PGD +V SPY+
Sbjct: 69 GIPELREALAEKFRRENGLSVTPEETIVTVGGKQALFN--LFQAILDPGDEVIVLSPYWV 126
Query: 147 AFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEA-SINIKGLIITNPSNPLG 205
++ + + GV +V V + E ER + A + K L++ +P+NP G
Sbjct: 127 SYPEMVRFAGGV-VVEVET-------LPEEGFVPDPERVRRAITPRTKALVVNSPNNPTG 178
Query: 206 TTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYS 265
++ L++L + + +LV DEIY ++ F S V E +
Sbjct: 179 AVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHF-SPGRVAPEHTLT------VNG 231
Query: 266 LSKDMGLPGFRVGIVYSFNDTVVNCGRK--MSSFGLVSSQT--------QYLLASMLSDD 315
+K + G+R+G CG K + + VSSQ+ Q+ L++
Sbjct: 232 AAKAFAMTGWRIGYA---------CGPKEVIKAMASVSSQSTTSPDTIAQWATLEALTNQ 282
Query: 316 EFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIAL 375
E F+ + +R +GL +G+ ++ + + MD + ++ E L
Sbjct: 283 EASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPDEVRAAERLL 342
Query: 376 WRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIA 421
+ + V PG+ F G R+ +A +++ L+ AL R A
Sbjct: 343 ------EAGVAVVPGTDFAAF--GHVRLSYATSEEN-LRKALERFA 379
>pdb|5BJ3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
Length = 385
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 147/346 (42%), Gaps = 46/346 (13%)
Query: 87 GLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYA 146
G+PE R+A+A+ + G VT + + IV GG+ L L +PGD +V SPY+
Sbjct: 69 GIPELREALAEKFRRENGLSVTPE-ETIVTVGGSQALFNLFQAIL-DPGDEVIVLSPYWV 126
Query: 147 AFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEA-SINIKGLIITNPSNPLG 205
++ + + GV +V V + E ER + A + K L++ +P+NP G
Sbjct: 127 SYPEMVRFAGGV-VVEVET-------LPEEGFVPDPERVRRAITPRTKALVVNSPNNPTG 178
Query: 206 TTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYS 265
++ L++L + + +LV DEIY ++ F S V E +
Sbjct: 179 AVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHF-SPGRVAPEHTLT------VNG 231
Query: 266 LSKDMGLPGFRVGIVYSFNDTVVNCGRK--MSSFGLVSSQT--------QYLLASMLSDD 315
+K + G+R+G CG K + + VS Q+ Q+ L++
Sbjct: 232 AAKAFAMTGWRIGYA---------CGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQ 282
Query: 316 EFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIAL 375
E F+ + +R +GL +G+ ++ + + MD + ++ E L
Sbjct: 283 EASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPDEVRAAERLL 342
Query: 376 WRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIA 421
+ + V PG+ F G R+ +A +++ L+ AL R A
Sbjct: 343 ------EAGVAVVPGTDFAAF--GHVRLSYATSEEN-LRKALERFA 379
>pdb|1GC3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|E Chain E, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|F Chain F, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|G Chain G, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|H Chain H, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|5BJ4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
pdb|5BJ4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
Length = 385
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 147/346 (42%), Gaps = 46/346 (13%)
Query: 87 GLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYA 146
G+PE R+A+A+ + G VT + + IV GG+ L L +PGD +V SPY+
Sbjct: 69 GIPELREALAEKFRRENGLSVTPE-ETIVTVGGSQALFNLFQAIL-DPGDEVIVLSPYWV 126
Query: 147 AFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEA-SINIKGLIITNPSNPLG 205
++ + + GV +V V + E ER + A + K L++ +P+NP G
Sbjct: 127 SYPEMVRFAGGV-VVEVET-------LPEEGFVPDPERVRRAITPRTKALVVNSPNNPTG 178
Query: 206 TTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYS 265
++ L++L + + +LV DEIY ++ F S V E +
Sbjct: 179 AVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHF-SPGRVAPEHTLT------VNG 231
Query: 266 LSKDMGLPGFRVGIVYSFNDTVVNCGRK--MSSFGLVSSQT--------QYLLASMLSDD 315
+K + G+R+G CG K + + VS Q+ Q+ L++
Sbjct: 232 AAKAFAMTGWRIGYA---------CGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQ 282
Query: 316 EFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIAL 375
E F+ + +R +GL +G+ ++ + + MD + ++ E L
Sbjct: 283 EASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPDEVRAAERLL 342
Query: 376 WRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIA 421
+ + V PG+ F G R+ +A +++ L+ AL R A
Sbjct: 343 ------EAGVAVVPGTDFAAF--GHVRLSYATSEEN-LRKALERFA 379
>pdb|1GCK|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1GCK|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1B5P|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
pdb|1B5P|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
Length = 385
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 147/346 (42%), Gaps = 46/346 (13%)
Query: 87 GLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYA 146
G+PE R+A+A+ + G VT + + IV GG+ L L +PGD +V SPY+
Sbjct: 69 GIPELREALAEKFRRENGLSVTPE-ETIVTVGGSQALFNLFQAIL-DPGDEVIVLSPYWV 126
Query: 147 AFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEA-SINIKGLIITNPSNPLG 205
++ + + GV +V V + E ER + A + K L++ +P+NP G
Sbjct: 127 SYPEMVRFAGGV-VVEVET-------LPEEGFVPDPERVRRAITPRTKALVVNSPNNPTG 178
Query: 206 TTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYS 265
++ L++L + + +LV DEIY ++ F S V E +
Sbjct: 179 AVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHF-SPGRVAPEHTLT------VNG 231
Query: 266 LSKDMGLPGFRVGIVYSFNDTVVNCGRK--MSSFGLVSSQT--------QYLLASMLSDD 315
+K + G+R+G CG K + + VS Q+ Q+ L++
Sbjct: 232 AAKAFAMTGWRIGYA---------CGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQ 282
Query: 316 EFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIAL 375
E F+ + +R +GL +G+ ++ + + MD + ++ E L
Sbjct: 283 EASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPDEVRAAERLL 342
Query: 376 WRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIA 421
+ + V PG+ F G R+ +A +++ L+ AL R A
Sbjct: 343 ------EAGVAVVPGTDFAAF--GHVRLSYATSEEN-LRKALERFA 379
>pdb|1BJW|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus
pdb|1BJW|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus
Length = 382
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 146/346 (42%), Gaps = 46/346 (13%)
Query: 87 GLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYA 146
G+PE R+A+A+ + G VT + + +GG N + + +PGD +V SPY+
Sbjct: 69 GIPELREALAEKFRRENGLSVTPEETIVTVGGKQALFN--LFQAILDPGDEVIVLSPYWV 126
Query: 147 AFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEA-SINIKGLIITNPSNPLG 205
++ + + GV +V V + E ER + A + K L++ +P+NP G
Sbjct: 127 SYPEMVRFAGGV-VVEVET-------LPEEGFVPDPERVRRAITPRTKALVVNSPNNPTG 178
Query: 206 TTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYS 265
++ L++L + + +LV DEIY ++ F S V E +
Sbjct: 179 AVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHF-SPGRVAPEHTLT------VNG 231
Query: 266 LSKDMGLPGFRVGIVYSFNDTVVNCGRK--MSSFGLVSSQT--------QYLLASMLSDD 315
+ + G+R+G CG K + + VSSQ+ Q+ L++
Sbjct: 232 AAXAFAMTGWRIGYA---------CGPKEVIKAMASVSSQSTTSPDTIAQWATLEALTNQ 282
Query: 316 EFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIAL 375
E F+ + +R +GL +G+ ++ + + MD + ++ E L
Sbjct: 283 EASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPDEVRAAERLL 342
Query: 376 WRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIA 421
+ + V PG+ F G R+ +A +++ L+ AL R A
Sbjct: 343 ------EAGVAVVPGTDFAAF--GHVRLSYATSEEN-LRKALERFA 379
>pdb|1GDE|A Chain A, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GDE|B Chain B, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GD9|A Chain A, Crystall Structure Of Pyrococcus Protein-A1
pdb|1GD9|B Chain B, Crystall Structure Of Pyrococcus Protein-A1
Length = 389
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 159/353 (45%), Gaps = 40/353 (11%)
Query: 87 GLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLA---NPGDAFLVPSP 143
GL E R+A+A+ + K G + DP +M GAN+ + L+ G+ L+P+P
Sbjct: 64 GLLELREAIAEKLKKQNG--IEADPKTEIMV--LLGANQAFLMGLSAFLKDGEEVLIPTP 119
Query: 144 YYAAFDRDLSWRTGVQI-VPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSN 202
+ ++ + G + VP + + + F++ + L+ + + + LII +P N
Sbjct: 120 AFVSYAPAVILAGGKPVEVPTYEE--DEFRLNVDELK------KYVTDKTRALIINSPCN 171
Query: 203 PLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHI 262
P G L + L+ + F+ + ++ ++ DE+Y ++ + S+A +D +
Sbjct: 172 PTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIA----SLDGMFERTIT 227
Query: 263 IYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQ-----TQYLLASMLSDDEF 317
+ SK + G+R+G V + + + +M F + ++ QY A L DE
Sbjct: 228 VNGFSKTFAMTGWRLGFVAAPSWII----ERMVKFQMYNATCPVTFIQYAAAKALK-DER 282
Query: 318 VDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRH--LLKEKTLEGEIAL 375
+ E K +R K L ++G+ +K + + +R L +K E
Sbjct: 283 SWKAVEEMRKEYDRRRKLVWKRLNEMGLPTVKPKGAFYIFPRIRDTGLTSKKFSE----- 337
Query: 376 WRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQQDK 428
++ + ++ V PGS+F G+ R+ +A + L+ A++R+ +++ K
Sbjct: 338 --LMLKEARVAVVPGSAFGKAGEGYVRISYATA-YEKLEEAMDRMERVLKERK 387
>pdb|1DJU|A Chain A, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
pdb|1DJU|B Chain B, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
Length = 388
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 158/353 (44%), Gaps = 40/353 (11%)
Query: 87 GLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLA---NPGDAFLVPSP 143
GL E R+A+A+ + K G + DP +M GAN+ + L+ G+ L+P+P
Sbjct: 63 GLLELREAIAEKLKKQNG--IEADPKTEIMV--LLGANQAFLMGLSAFLKDGEEVLIPTP 118
Query: 144 YYAAFDRDLSWRTGVQI-VPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSN 202
+ ++ + G + VP + + + F++ + L+ + + + LII +P N
Sbjct: 119 AFVSYAPAVILAGGKPVEVPTYEE--DEFRLNVDELK------KYVTDKTRALIINSPCN 170
Query: 203 PLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHI 262
P G L + L+ + F+ + ++ ++ DE+Y ++ + S+A +D +
Sbjct: 171 PTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIA----SLDGMFERTIT 226
Query: 263 IYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQ-----TQYLLASMLSDDEF 317
+ SK + G+R+G V + + + +M F + ++ QY A L D+
Sbjct: 227 VNGFSKTFAMTGWRLGFVAAPSWII----ERMVKFQMYNATCPVTFIQYAAAKALKDERS 282
Query: 318 VDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRH--LLKEKTLEGEIAL 375
+ E K +R K L ++G+ +K + + +R L +K E
Sbjct: 283 WKA-VEEMRKEYDRRRKLVWKRLNEMGLPTVKPKGAFYIFPRIRDTGLTSKKFSE----- 336
Query: 376 WRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQQDK 428
++ + ++ V PGS+F G+ R+ +A + L+ A+ R+ +++ K
Sbjct: 337 --LMLKEARVAVVPGSAFGKAGEGYVRISYATA-YEKLEEAMERMERVLKERK 386
>pdb|2Z61|A Chain A, Crystal Structure Of Mj0684 From Methanococcus Jannaschii
Reveals Its Similarity In The Active Site To Kynurenine
Aminotransferases
Length = 370
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 153/365 (41%), Gaps = 53/365 (14%)
Query: 71 EGVEVFKDIAI-FQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMF 129
EG++ K+ + D G+ E R+ +++ + PD I++ GG++ +
Sbjct: 50 EGIKSLKEGKTHYTDSRGILELREKISELYKDKYKADII--PDNIIITGGSSLGLFFALS 107
Query: 130 CLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEAS 189
+ + GD L+ +P Y + + + G + PV CD T E+LE A S
Sbjct: 108 SIIDDGDEVLIQNPCYPCYKNFIRF-LGAK--PVFCDF------TVESLEEA------LS 152
Query: 190 INIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEV 249
K +II +PSNPLG +DR+ + F + +++ DEIY V+ ++++
Sbjct: 153 DKTKAIIINSPSNPLGEVIDRE----IYEFAYENIPYIISDEIYNGLVYEGKCYSAI--- 205
Query: 250 IQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLA 309
E D N + +I S + G+R+G V S ND ++ K+ +S+ T A
Sbjct: 206 --EFDENLEKTILINGFSXLYAMTGWRIGYVIS-NDEIIEAILKLQQNLFISAPTISQYA 262
Query: 310 SMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDL--------R 361
++ + ++ + + K +R K ++ G + + ++
Sbjct: 263 ALKAFEKETEREINSMIKEFDRRRRLVLKYVKDFGWEVNNPIGAYYVFPNIGEDGREFAY 322
Query: 362 HLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIA 421
LLKEK + ++PG F + R+ +AN + ++ L RI
Sbjct: 323 KLLKEKFVA----------------LTPGIGFGSKGKNYIRISYAN-SYENIKEGLERIK 365
Query: 422 AFVQQ 426
F+ +
Sbjct: 366 EFLNK 370
>pdb|2O1B|A Chain A, Structure Of Aminotransferase From Staphylococcus Aureus
Length = 404
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 135/343 (39%), Gaps = 37/343 (10%)
Query: 85 YHGLPEFRQAVAKFMGKGRGGRVTFDP-DRIVMGGGATGANELIMFCLANPGDAFLVPSP 143
+HG F+QA+ F R VT D D + + G + C+ NPGD L+P P
Sbjct: 84 FHGKEAFKQAIVDFYQ--RQYNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPDP 141
Query: 144 YYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLI-ITNPSN 202
Y + + G + VP++ + + + + I+ LI +T P+N
Sbjct: 142 GYTDYLAGVLLADG-KPVPLNLEPPHYL--------PDWSKVDSQIIDKTKLIYLTYPNN 192
Query: 203 PLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHI 262
P G+T ++ ++ + +V D Y A F + + +A + +D+
Sbjct: 193 PTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILAS-----ENGKDVAIE 247
Query: 263 IYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMS-----SFGLVSSQTQYLLASMLSDDEF 317
IYSLSK GFRVG D + + + FG + Y L
Sbjct: 248 IYSLSKGYNXSGFRVGFAVGNKDXIQALKKYQTHTNAGXFGALQDAAIYAL-------NH 300
Query: 318 VDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWR 377
D+FL E S R F L + + + + G++ W++ + E +
Sbjct: 301 YDDFLEEQSNVFKTRRDRFEAXLAKADLPFVHAKGGIYVWLETPPGYDSEQFE------Q 354
Query: 378 TIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRI 420
+V + + V+PG F + R+ A +DD L A R+
Sbjct: 355 FLVQEKSILVAPGKPFGENGNRYVRISLA-LDDQKLDEAAIRL 396
>pdb|3ELE|A Chain A, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|B Chain B, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|C Chain C, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|D Chain D, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
Length = 398
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 134/328 (40%), Gaps = 36/328 (10%)
Query: 86 HGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPG-DAFLVPSPY 144
G E R A+A+F+ G F+ D + GA + + L + D F+ +PY
Sbjct: 76 QGDVETRAAIAEFLNNTHGTH--FNADNLYXTXGAAASLSICFRALTSDAYDEFITIAPY 133
Query: 145 YAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPL 204
+ + + G ++V V D + +F+I +ALE + + + +G+II +P+NP
Sbjct: 134 FPEY-KVFVNAAGARLVEVPAD-TEHFQIDFDALE------ERINAHTRGVIINSPNNPS 185
Query: 205 GTTLDRDTLKSLVSFINDKN------IHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRD 258
GT +T+K L + K+ I ++ DE Y V+ K V + D
Sbjct: 186 GTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYY-------D 238
Query: 259 LIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFV 318
+ YS SK + LPG R+G V D V + ++ Y+ A L V
Sbjct: 239 NTLVCYSYSKSLSLPGERIGYVL-VPDEVYDKAELYAAVCGAGRALGYVCAPSLFQKXIV 297
Query: 319 DNFLVETSKRLAKRHHNFT-KGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWR 377
K + + +GL ++G +C K + + ++ K LE + +
Sbjct: 298 KCQGATGDINAYKENRDLLYEGLTRIGYHCFKPDGAFYXFV--------KALEDDSNAFC 349
Query: 378 TIVNDVKLNVSPGSSFQCTEPGWFRVCF 405
+ + + F C PGW R+ +
Sbjct: 350 EKAKEEDVLIVAADGFGC--PGWVRISY 375
>pdb|1V2D|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
pdb|1V2E|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2E|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2F|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
pdb|1V2F|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
Length = 381
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 145/354 (40%), Gaps = 49/354 (13%)
Query: 87 GLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYA 146
GLP R+A+A+ +P+ +V+ GAT A +++ L PGD +V P++
Sbjct: 62 GLPALREALAE--------EFAVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFD 113
Query: 147 AFDRDLSWRTGVQIVPVHCDIS-NNFKITREALEAAYERAQEASINIKGLIITNPSNPLG 205
+ D ++ G + V D++ F++ ALE A + + L++ P NP G
Sbjct: 114 VYLPD-AFLAGAKARLVRLDLTPEGFRLDLSALEKAL------TPRTRALLLNTPMNPTG 166
Query: 206 TTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSS-PKFTSVAEVIQEMDCNRDLIHIIY 264
L+++ ++ L+ DE+Y + P+ ++E R +
Sbjct: 167 LVFGERELEAIARLARAHDLFLISDEVYDELYYGERPR------RLREFAPERTF--TVG 218
Query: 265 SLSKDMGLPGFRVGIVYSFNDTVVNCG--RKMSSFGLVSS-QTQYLLASMLSDDEFVDNF 321
S K + G+RVG + + + R+ +SF + Q A L+ E
Sbjct: 219 SAGKRLEATGYRVGWIVGPKEFMPRLAGMRQWTSFSAPTPLQAGVAEALKLARREGFYEA 278
Query: 322 LVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRT--I 379
L E +R R GL +G+ G +F M E+ W +
Sbjct: 279 LREGYRR---RRDLLAGGLRAMGLRVYVPE-GTYFLM------------AELPGWDAFRL 322
Query: 380 VNDVKLNVSPGSSFQCTEPG--WFRVCFANMDDDTLQVALNRIAAFVQQDKESE 431
V + ++ + P S+F +P FR F +++ L +AL R+ V +E+E
Sbjct: 323 VEEARVALIPASAFYLEDPPKDLFRFAFCKTEEE-LHLALERLGRVVNSPREAE 375
>pdb|1XI9|A Chain A, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|B Chain B, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|C Chain C, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|D Chain D, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
Length = 406
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 151/361 (41%), Gaps = 48/361 (13%)
Query: 82 FQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVP 141
+ D GLPE R+A+ + + G +T PD + + T A +LI L +PGD LVP
Sbjct: 74 YGDSEGLPELRKAIVEREKRKNGVDIT--PDDVRVTAAVTEALQLIFGALLDPGDEILVP 131
Query: 142 SPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASIN-IKGLIITNP 200
P Y + + + G PV I E + + ++ + K + + NP
Sbjct: 132 GPSYPPYTGLVKFYGG---KPVEYRT-----IEEEDWQPDIDDIRKKITDRTKAIAVINP 183
Query: 201 SNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLI 260
+NP G D+ TL+ +++ + I ++ DEIY + E I +D+
Sbjct: 184 NNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYE-------GEHISPGSLTKDVP 236
Query: 261 HIIYS-LSKDMGLPGFRVGIVYSFN-----DTVVNCGRKMSSFGLV-SSQTQYLLASMLS 313
I+ + LSK G+R+G +Y + V +++ L ++ Q+ + L+
Sbjct: 237 VIVMNGLSKVYFATGWRLGYMYFVDPENKLSEVREAIDRLARIRLCPNTPAQFAAIAGLT 296
Query: 314 DDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLKSNAGLFFWMDLRHLLKEKTLEGE 372
++L E K+L +R K L ++ GI+ K + + + E
Sbjct: 297 GPM---DYLKEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPKI-----------E 342
Query: 373 IALWRT-------IVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQ 425
+ W+ ++++ + GS F G FR F + L+ A++R F++
Sbjct: 343 VGPWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLP-PIEILEEAMDRFEKFMK 401
Query: 426 Q 426
+
Sbjct: 402 E 402
>pdb|2X5D|A Chain A, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|B Chain B, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|C Chain C, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|D Chain D, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
Length = 412
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 157/374 (41%), Gaps = 47/374 (12%)
Query: 67 ICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANEL 126
+CT E D + G+P R+A++ + ++ + + IV G G L
Sbjct: 59 LCTVAQRE---DTHGYSTSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHL 115
Query: 127 IMFCLANPGDAFLVPSP-----YYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAA 181
++ L + GD LVP+P Y A R+ V +VP D N
Sbjct: 116 MLATLDH-GDTILVPNPSYPIHIYGAVIAGAQVRS-VPLVP-GIDFFNEL---------- 162
Query: 182 YERAQEASI-NIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSS 240
ERA SI + +I+ PSNP ++ D + +V+ ++ +V D YA V+
Sbjct: 163 -ERAIRESIPKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDG 221
Query: 241 PKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMS--SFG 298
K S+ +V +D+ ++LSK + G+R+G + + V R S +G
Sbjct: 222 WKAPSIMQV----PGAKDIAVEFFTLSKSYNMAGWRIGFMVGNPELVSALARIKSYHDYG 277
Query: 299 LVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWM 358
+ +A++ D + V + +++ +R KGL + G A ++ W
Sbjct: 278 TFTPLQVAAIAALEGDQQCVRDI----ARQYQQRRDVLVKGLREAGWMVENPKASMYVWA 333
Query: 359 DL----RHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDD-DTL 413
+ HL G + + ++ D K++VSPG F + G V FA +++ D L
Sbjct: 334 KIPEPYAHL-------GSLEFAKKLLQDAKVSVSPGIGF--GDYGDDHVRFALIENRDRL 384
Query: 414 QVALNRIAAFVQQD 427
+ A+ I A + D
Sbjct: 385 RQAVRGIKAMFRAD 398
>pdb|3H14|A Chain A, Crystal Structure Of A Putative Aminotransferase From
Silicibacter Pomeroyi
Length = 391
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 145/347 (41%), Gaps = 35/347 (10%)
Query: 87 GLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYA 146
GLP RQ +A+ G+ G V DP R+V+ G++G L L + GD + +P Y
Sbjct: 69 GLPALRQRIARLYGEWYG--VDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYP 126
Query: 147 AFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGT 206
++ + L + +VPV + ++ + + A + A +++ GL + +P+NP GT
Sbjct: 127 SYRQILR---ALGLVPVDLPTAPENRL--QPVPADF-----AGLDLAGLXVASPANPTGT 176
Query: 207 TLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSL 266
LD +L+ + + DEIY + + T++ E+ E C ++I S
Sbjct: 177 XLDHAAXGALIEAAQAQGASFISDEIYHGIEYEAKAVTAL-ELTDE--C-----YVINSF 228
Query: 267 SKDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYL--LASMLSDDEFVDNFLVE 324
SK G+RVG D V R + + + + LA++ D E N V
Sbjct: 229 SKYFSXTGWRVGWXVVPEDQVRVVERIAQNXFICAPHASQVAALAALDCDAELQANLDVY 288
Query: 325 TSKRLAKRHHNFTKGLEQVGINCLKSNAGLFF-WMDLRHLLKEKTLEGEIALWRTIVNDV 383
+ R L + G + G F+ + D+ L + A I+
Sbjct: 289 KANRKLXLER-----LPKAGFTRIAPPDGAFYVYADVSDLTDDSR-----AFAAEILEKA 338
Query: 384 KLNVSPGSSFQCTE-PGWFRVCFANMDDDTLQVALNRIAAFVQQDKE 429
+ V+PG F G R +A D ++ L+R+ AF Q E
Sbjct: 339 GVAVTPGLDFDPERGAGTLRFSYARATAD-IEEGLDRLEAFXQARGE 384
>pdb|1J32|A Chain A, Aspartate Aminotransferase From Phormidium Lapideum
pdb|1J32|B Chain B, Aspartate Aminotransferase From Phormidium Lapideum
Length = 388
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/342 (19%), Positives = 145/342 (42%), Gaps = 27/342 (7%)
Query: 87 GLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYA 146
G P R+A+A+ + + G + + D I++ G + +M + PGD ++P+P++
Sbjct: 68 GEPRLREAIAQKLQRDNG--LCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWV 125
Query: 147 AFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGT 206
++ + G ++ + + FK++ E + Q + K L+ PSNP G
Sbjct: 126 SYPEMVKLAEGTPVI-LPTTVETQFKVSPEQIR------QAITPKTKLLVFNTPSNPTGM 178
Query: 207 TLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSL 266
D ++++ + + ++ DEIY ++ + S+ E R + +
Sbjct: 179 VYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEA-YERSV--VCSGF 235
Query: 267 SKDMGLPGFRVGIVYSFNDTVVNCGRKMS--SFGLVSSQTQY-LLASMLSDDEFVDNFLV 323
+K + G+RVG + + +V K+ S V + QY +A+ + + V L
Sbjct: 236 AKTYAMTGWRVGFL-AGPVPLVKAATKIQGHSTSNVCTFAQYGAIAAYENSQDCVQEMLA 294
Query: 324 ETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDV 383
++R R + G+ C K + + + + KT + +++
Sbjct: 295 AFAER---RRYMLDALNAMPGLECPKPDGAFYMFPSI-----AKTGRSSLDFCSELLDQH 346
Query: 384 KLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQ 425
++ PG++F + R+ +A D DT++ + R+ F+
Sbjct: 347 QVATVPGAAFGADD--CIRLSYAT-DLDTIKRGMERLEKFLH 385
>pdb|1X0M|A Chain A, A Human Kynurenine Aminotransferase Ii Homologue From
Pyrococcus Horikoshii Ot3
Length = 403
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 159/366 (43%), Gaps = 29/366 (7%)
Query: 70 AEGVEVFKDIAI-FQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIM 128
E +E + D A+ + G R+ + K++GK G ++ D D I++ G+ A +LI
Sbjct: 56 VEIMEKYADKALQYGTTKGFTPLRETLMKWLGKRYG--ISQDND-IMITSGSQQALDLIG 112
Query: 129 FCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEA 188
NPGD +V +P Y A + ++ Q + + D K+ E LE + +
Sbjct: 113 RVFLNPGDIVVVEAPTYLAALQAFNFYEP-QYIQIPLD-DEGMKV--EILEEKLKELKSQ 168
Query: 189 SINIKGLIITNPS--NPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSV 246
+K ++ T P+ NP G T++ D K L+ ++ + +V D+ Y +S +
Sbjct: 169 GKKVK-VVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSG----NP 223
Query: 247 AEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQY 306
+ I+ +D +I+ + + SK + PGFR+G + + S L ++
Sbjct: 224 EKKIKALDNEGRVIY-LGTFSKILA-PGFRIGWMVGDPGIIRKMEIAKQSTDLCTNVFGQ 281
Query: 307 LLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV---GINCLKSNAGLFFWMDLRHL 363
++A D +++ + E K R + LE+ G+ K G+F W+ L
Sbjct: 282 VVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWVTLPDG 341
Query: 364 LKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTE--PGWFRVCFANMDDDTLQVALNRIA 421
+ K + L R I V PG +F R+ F +D+D + + R+A
Sbjct: 342 IDSKKM-----LERAIKKGVAY--VPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLA 394
Query: 422 AFVQQD 427
++++
Sbjct: 395 ETIKEE 400
>pdb|3AOV|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOV|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOW|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3AOW|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3ATH|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3ATH|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3AV7|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
pdb|3AV7|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
Length = 448
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 159/366 (43%), Gaps = 29/366 (7%)
Query: 70 AEGVEVFKDIAI-FQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIM 128
E +E + D A+ + G R+ + K++GK G ++ D D I++ G+ A +LI
Sbjct: 101 VEIMEKYADKALQYGTTKGFTPLRETLMKWLGKRYG--ISQDND-IMITSGSQQALDLIG 157
Query: 129 FCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEA 188
NPGD +V +P Y A + ++ Q + + D K+ E LE + +
Sbjct: 158 RVFLNPGDIVVVEAPTYLAALQAFNFYEP-QYIQIPLD-DEGMKV--EILEEKLKELKSQ 213
Query: 189 SINIKGLIITNPS--NPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSV 246
+K ++ T P+ NP G T++ D K L+ ++ + +V D+ Y +S +
Sbjct: 214 GKKVK-VVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSG----NP 268
Query: 247 AEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQY 306
+ I+ +D +I+ + + SK + PGFR+G + + S L ++
Sbjct: 269 EKKIKALDNEGRVIY-LGTFSKILA-PGFRIGWMVGDPGIIRKMEIAKQSTDLCTNVFGQ 326
Query: 307 LLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV---GINCLKSNAGLFFWMDLRHL 363
++A D +++ + E K R + LE+ G+ K G+F W+ L
Sbjct: 327 VVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWVTLPDG 386
Query: 364 LKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTE--PGWFRVCFANMDDDTLQVALNRIA 421
+ K + L R I V PG +F R+ F +D+D + + R+A
Sbjct: 387 IDSKKM-----LERAIKKGVAY--VPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLA 439
Query: 422 AFVQQD 427
++++
Sbjct: 440 ETIKEE 445
>pdb|3PDX|A Chain A, Crystal Structural Of Mouse Tyrosine Aminotransferase
Length = 402
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 140/329 (42%), Gaps = 42/329 (12%)
Query: 114 IVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKI 173
+++ G + A EL + LANPG L+P P ++ + R L+ G+++ + +++I
Sbjct: 98 VILTSGCSQAIELCLAVLANPGQNILIPRPGFSLY-RTLAESMGIEVKLYNLLPEKSWEI 156
Query: 174 TREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIY 233
+ LE+ + L++ NPSNP G+ + L+ +++ + + ++ DEIY
Sbjct: 157 DLKQLESLIDEKTAC------LVVNNPSNPCGSVFSKRHLQKILAVAERQCVPILADEIY 210
Query: 234 AATVFSSPKFTSVAEV---IQEMDCNRDLIHIIYSLSKDMGLPGFRVG--IVYSFNDTVV 288
VFS K+ +A + + + C L+ +PG+R+G +++ D
Sbjct: 211 GDMVFSDCKYEPMATLSTNVPILSCG--------GLAXRWLVPGWRLGWILIHDRRDIFG 262
Query: 289 NCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCL 348
N R GLV +Q +L + + L T + + +F K + L
Sbjct: 263 NEIRD----GLV-KLSQRILGPCTIVQGALKSILQRTPQEFYQDTLSFLKSNADLCYGAL 317
Query: 349 KSNAG-----------LFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTE 397
+ G L +++ H E ++ ++ + ++ P + F+
Sbjct: 318 SAIPGLQPVRPSGAMYLMVGIEMEHF---PEFENDVEFTERLIAEQSVHCLPATCFE--Y 372
Query: 398 PGWFRVCFANMDDDTLQVALNRIAAFVQQ 426
P +FRV + L+ A +RI F +Q
Sbjct: 373 PNFFRVVITVPEVMMLE-ACSRIQEFCEQ 400
>pdb|3OP7|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 1.70
A Resolution
pdb|3P6K|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
pdb|3P6K|B Chain B, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
Length = 375
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 92/217 (42%), Gaps = 24/217 (11%)
Query: 86 HGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYY 145
G P F+++V++ P++I+ GATGAN L+++ L PGD + P Y
Sbjct: 63 EGSPAFKKSVSQLY-------TGVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTY 115
Query: 146 AAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLG 205
D+ G ++ + N + E L Q K + I N +NP G
Sbjct: 116 QQL-YDIPKSLGAEVDLWQIEEENGWLPDLEKLR------QLIRPTTKXICINNANNPTG 168
Query: 206 TTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYS 265
DR L+ LV ++ +++ DE+Y + FS S+ EV + + S
Sbjct: 169 AVXDRTYLEELVEIASEVGAYILSDEVYRS--FSELDVPSIIEVYDKGIA-------VNS 219
Query: 266 LSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSS 302
LS LPG R+G V + N V + R + + +
Sbjct: 220 LSXTYSLPGIRIGWV-AANHQVTDILRDYRDYTXICA 255
>pdb|3DYD|A Chain A, Human Tyrosine Aminotransferase
pdb|3DYD|B Chain B, Human Tyrosine Aminotransferase
Length = 427
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 137/326 (42%), Gaps = 36/326 (11%)
Query: 114 IVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKI 173
+++ G + A +L + LANPG LVP P ++ + + L+ G+++ + +++I
Sbjct: 121 VILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLY-KTLAESMGIEVKLYNLLPEKSWEI 179
Query: 174 TREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIY 233
+ LE + LI+ NPSNP G+ + L+ +++ + + ++ DEIY
Sbjct: 180 DLKQLEYLIDEKTAC------LIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIY 233
Query: 234 AATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVG--IVYSFNDTVVNCG 291
VFS K+ +A + ++ I L+K +PG+R+G +++ D N
Sbjct: 234 GDMVFSDCKYEPLATLSTDVP-----ILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEI 288
Query: 292 RKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSN 351
R GLV +Q +L + + L T +F K + L +
Sbjct: 289 RD----GLV-KLSQRILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAI 343
Query: 352 AG-----------LFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGW 400
G L +++ H E ++ +V + ++ P + F+ P +
Sbjct: 344 PGLRPVRPSGAMYLMVGIEMEHF---PEFENDVEFTERLVAEQSVHCLPATCFE--YPNF 398
Query: 401 FRVCFANMDDDTLQVALNRIAAFVQQ 426
RV + L+ A +RI F +Q
Sbjct: 399 IRVVITVPEVMMLE-ACSRIQEFCEQ 423
>pdb|3IHJ|A Chain A, Human Alanine Aminotransferase 2 In Complex With Plp
Length = 498
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 12/208 (5%)
Query: 86 HGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPG----DAFLVP 141
G+ R+ VA ++ + R G V DPD I + GA+ I+ L + G ++P
Sbjct: 129 QGVNCIREDVAAYITR-RDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIP 187
Query: 142 SPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPS 201
P Y + +S +Q V + D N + + L A + A++ + K L I NP
Sbjct: 188 IPQYPLYSAVISELDAIQ-VNYYLDEENCWALNVNELRRAVQEAKD-HCDPKVLCIINPG 245
Query: 202 NPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSP-KFTSVAEVIQEM----DCN 256
NP G R ++ ++ F ++ + L+ DE+Y V+S +F S +V+ EM N
Sbjct: 246 NPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSN 305
Query: 257 RDLIHIIYSLSKDMGLPGFRVGIVYSFN 284
+L + MG G+R G + N
Sbjct: 306 VELASFHSTSKGYMGECGYRGGYMEVIN 333
>pdb|1BW0|A Chain A, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
pdb|1BW0|B Chain B, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
Length = 416
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 95/421 (22%), Positives = 177/421 (42%), Gaps = 63/421 (14%)
Query: 33 PTQNPGGVIQLGLAENQLCFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGL---- 88
P+ +P +I+L + + L +L+ +A ++ K+ Q+ +G
Sbjct: 28 PSPSPKPIIKLSVGDPTLDKNLLT------------SAAQIKKLKEAIDSQECNGYFPTV 75
Query: 89 --PEFRQAVA-----KFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVP 141
PE R+AVA F+ K + T D +V+ G + + + + + GD LVP
Sbjct: 76 GSPEAREAVATWWRNSFVHKEEL-KSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVP 134
Query: 142 SPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPS 201
P + ++ + G+ + +C N+++ + + + K LI+TNPS
Sbjct: 135 QPGFPHYE-TVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDD------KTKLLIVTNPS 187
Query: 202 NPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFS----SPKFTSVAEVIQEMDCNR 257
NP G+ R ++ +V + + L DEIYA VF + FTSVA+ E R
Sbjct: 188 NPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADF--ETTVPR 245
Query: 258 DLIHIIYSLSKDMGLPGFRVG-IVY--------SFNDTVVNCGRKMSSFGLVSSQTQYLL 308
I+ + ++ +PG+R+G ++Y SF + + G M G + L
Sbjct: 246 V---ILGGTAXNLVVPGWRLGWLLYVDPHGNGPSFLEGLKRVG--MLVCGPCTVVQAALG 300
Query: 309 ASML-SDDEFVDNFL--VETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLK 365
++L + E +D + +E S H GL G + M L K
Sbjct: 301 EALLNTPQEHLDQIVAKIEESAMYLYNHIGECIGLAPT------MPRGAMYLMSRIDLEK 354
Query: 366 EKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQ 425
+ ++ ++ + ++ + + V PG+ F PG+ R+ + + A+ RI AF Q
Sbjct: 355 YRDIKTDVEFFEKLLEEENVQVLPGTIFHA--PGFTRLT-TTRPVEVYREAVERIKAFCQ 411
Query: 426 Q 426
+
Sbjct: 412 R 412
>pdb|3B46|A Chain A, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
pdb|3B46|B Chain B, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
Length = 447
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 135/325 (41%), Gaps = 34/325 (10%)
Query: 121 TGANELIMFCLA---NPGDAFLVPSPYYAAFDRDLSWRTG-VQIVPVHCDISNNFKITR- 175
TGANE I+ CL N GD +V P++ + ++ G V VP++ + + TR
Sbjct: 125 TGANEGILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRG 184
Query: 176 EALEAAYERAQEA-SINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYA 234
E +E+ ++A + K +II P NP+G R+ L +L + N+ ++ DE+Y
Sbjct: 185 EEWTIDFEQFEKAITSKTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYE 244
Query: 235 ATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKM 294
F+ FT +A + E+ L + S G+R+G V S N +++ K
Sbjct: 245 HLYFTD-SFTRIATLSPEIG---QLTLTVGSAGXSFAATGWRIGWVLSLNAELLSYAAKA 300
Query: 295 SSFGLVSSQTQYLLASMLS-DDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAG 353
+ +S + A S +D + + + + FT +++G+
Sbjct: 301 HTRICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDELGLPYTAPEGT 360
Query: 354 LFFWMDLRHL-----------LKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPG--- 399
F +D + + K + I+ W ++N++ + P + F E
Sbjct: 361 YFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHW--LINELGVVAIPPTEFYIKEHEKAA 418
Query: 400 ----WFRVCFANMDDDTLQVALNRI 420
F VC DD L+ A+ R+
Sbjct: 419 ENLLRFAVC---KDDAYLENAVERL 440
>pdb|2ZC0|A Chain A, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|B Chain B, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|C Chain C, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|D Chain D, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
Length = 407
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/357 (21%), Positives = 144/357 (40%), Gaps = 34/357 (9%)
Query: 81 IFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLV 140
++ +G+PE R+ +A F+ K + P+ IV+ G TGA +L+ L +PGD +
Sbjct: 70 MYTPANGIPELREELAAFLKKYD--HLEVSPENIVITIGGTGALDLLGRVLIDPGDVVIT 127
Query: 141 PSPYYA----AFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLI 196
+P Y AF++ ++ VPV D + E ++ + Q+ LI
Sbjct: 128 ENPSYINTLLAFEQ---LGAKIEGVPVDND-GMRVDLLEEKIKELKAKGQKVK-----LI 178
Query: 197 ITNPS--NPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMD 254
T P+ NP+G T+ + K+L+ + ++ ++ D Y + ++ +D
Sbjct: 179 YTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVP----LKALD 234
Query: 255 CNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQ-TQYLLASMLS 313
N + + +LSK +G GFR+G + + + + + + +QY+ L
Sbjct: 235 -NEGRVIVAGTLSKVLGT-GFRIGWIIAEGEILKKVLMQKQPIDFCAPAISQYIALEYLK 292
Query: 314 DDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINC--LKSNAGLFFWMDLRHLLKEKTLEG 371
F L ++ K LE N K AG+F L +
Sbjct: 293 RGYFEKYHLEGALLGYKEKRDIMLKALENHLPNAEFTKPIAGMFVMFFLPEGADGISFAN 352
Query: 372 EIALWRTIVNDVKLNVSPGSSFQCTEPG--WFRVCFANMDDDTLQVALNRIAAFVQQ 426
E+ +V V PG F E G R+ F+ + + + + ++A ++
Sbjct: 353 ELMEREGVV------VVPGKPFYTDESGKNAIRLNFSRPSKEEIPIGIKKLAKLYKE 403
>pdb|3JTX|A Chain A, Crystal Structure Of Aminotransferase (np_283882.1) From
Neisseria Meningitidis Z2491 At 1.91 A Resolution
pdb|3JTX|B Chain B, Crystal Structure Of Aminotransferase (np_283882.1) From
Neisseria Meningitidis Z2491 At 1.91 A Resolution
Length = 396
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/339 (20%), Positives = 131/339 (38%), Gaps = 32/339 (9%)
Query: 61 KNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGA 120
K+P + T ++ + GLPE RQA A ++ K R +T D D ++
Sbjct: 41 KHPTPKVITDALTASLHELEKYPLTAGLPELRQACANWL-KRRYDGLTVDADNEILP--V 97
Query: 121 TGANELI---MFCLANP-----GDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFK 172
G+ E + + + NP A + P+P+Y ++ + G +I +C +
Sbjct: 98 LGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYE-GATLLGGGEIHFANCPAPSFNP 156
Query: 173 ITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEI 232
R E ++R K + + +P+NP G+ LD D K + + + DE
Sbjct: 157 DWRSISEEVWKRT-------KLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDEC 209
Query: 233 YAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGR 292
Y+ F K + ++ +R + SLS +PG R G V + + N
Sbjct: 210 YSEIYFDGNKPLGCLQAAAQLGRSRQKLLXFTSLSXRSNVPGLRSGFVAGDAELLKNFLL 269
Query: 293 KMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNA 352
+ G S + DDE +++ + ++ L+QV + +A
Sbjct: 270 YRTYHGSAXSIPVQRASIAAWDDE---QHVIDNRRLYQEKFERVIPILQQV-FDVKLPDA 325
Query: 353 GLFFWMDLRHLLKEKTLEG-EIALWRTIVNDVKLNVSPG 390
+ W+ K +G ++A R + + V PG
Sbjct: 326 SFYIWL--------KVPDGDDLAFARNLWQKAAIQVLPG 356
>pdb|3B1C|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1D|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1E|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
Length = 392
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/286 (19%), Positives = 110/286 (38%), Gaps = 50/286 (17%)
Query: 84 DYHGLPEFRQAVAKFMGKGRGG--------------------RVTFDPDRIVMGGGATGA 123
D+ +PE +QA+ + + G + +FD + IV G A
Sbjct: 42 DFEVMPEVKQAIHDYAEQLVYGYTYASDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPA 101
Query: 124 NELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYE 183
+ + G+A L+ SP Y F R + + SN+ K + +E
Sbjct: 102 ISIAIQAFTKEGEAVLINSPVYPPFARSVRLNNRKLV-------SNSLKEENGLFQIDFE 154
Query: 184 RAQEASI--NIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSP 241
+ + + ++K ++ NP NP G +R+ L+ + ++ LV DEI+
Sbjct: 155 QLENDIVENDVKLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGH 214
Query: 242 KFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDT---------VVNCGR 292
+ S V + +D ++ S +K + G + N T +VN
Sbjct: 215 EHVSFNTVSPDF---KDFALVLSSATKTFNIAGTKNSYAIIENPTLCAQFKHQQLVNNHH 271
Query: 293 KMSSFGLVSSQTQY---------LLASMLSDDEFVDNFLVETSKRL 329
++SS G ++++T Y L A + + +F + + + RL
Sbjct: 272 EVSSLGYIATETAYRYGKPWLVALKAVLEENIQFAVEYFAQEAPRL 317
>pdb|1W7N|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Pmp Form
Length = 422
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 120/290 (41%), Gaps = 29/290 (10%)
Query: 87 GLPEFRQAVAKFMGKGRGGRVTFDPDR-IVMGGGATGANELIMFCLANPGDAFLVPSPYY 145
G P + +A F G+ G + DP R +++ G GA L + GD ++ P++
Sbjct: 68 GYPPLTKILASFFGELLGQEI--DPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFF 125
Query: 146 AAFDRDLSWRTGVQIV------PVH---CDISNNFKITREALEAAYERAQEASINIKGLI 196
++ G + P+ S+N+++ E A + + K L+
Sbjct: 126 DCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLD------PMELAGKFTSRTKALV 179
Query: 197 ITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCN 256
+ P+NPLG R+ L+ + S ++ + DE+Y V+ + S+A + +
Sbjct: 180 LNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWE-- 237
Query: 257 RDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKM--SSFGLVSSQTQYLLASMLSD 314
R L I S K G++VG V D ++ R + +S +Q+Q +A
Sbjct: 238 RTL--TIGSAGKTFSATGWKVGWVLG-PDHIMKHLRTVHQNSVFHCPTQSQAAVAESFER 294
Query: 315 DEFV----DNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDL 360
++ + ++ V+ + + + + + L+ VG+ L F D+
Sbjct: 295 EQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVGLKPLIPQGSYFLITDI 344
>pdb|1WST|A Chain A, Crystal Structure Of Multiple Substrate Aminotransferase
(Msat) From Thermococcus Profundus
Length = 417
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/348 (20%), Positives = 140/348 (40%), Gaps = 27/348 (7%)
Query: 87 GLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYA 146
G R A+A++M K + I+ G+ A +LI NPGD +V +P Y
Sbjct: 84 GFTPLRLALARWMEKRYD--IPMSKVEIMTVAGSQQALDLIGRVFLNPGDPIVVEAPTYL 141
Query: 147 AFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGT 206
A + + + + + D ++ + R Q + I + T NP G
Sbjct: 142 AAIQAFKYYDP-EFISIPLD-DKGMRVDLLEEKLEELRKQGKRVKIVYTVSTF-QNPAGV 198
Query: 207 TLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIY-- 264
T+ D K L+ N+ + +V D Y+ +S I+ D D +IY
Sbjct: 199 TMSVDRRKKLLELANEYDFLIVEDGPYSELRYSG----EPTPPIKHFD---DYGRVIYLG 251
Query: 265 SLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVE 324
+ SK + PGFR+G V + + S L ++ +A ++ ++D + +
Sbjct: 252 TFSKILA-PGFRIGWVAAHPHLIRKMEIAKQSIDLCTNTFGQAIAWKYVENGYLDEHIPK 310
Query: 325 TSKRLAKRHHNFTKGLEQV---GINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVN 381
+ R + LE+ G+ K G+F + L + ++ ++ + R +
Sbjct: 311 IIEFYKPRRDAMLEALEEYMPEGVEWTKPEGGMFVRVTL-----PEGIDTKLMMERAVAK 365
Query: 382 DVKLNVSPGSSF--QCTEPGWFRVCFANMDDDTLQVALNRIAAFVQQD 427
V PG +F + R+ F + ++T++ + R+A ++++
Sbjct: 366 GVAY--VPGEAFFVHRDKKNTMRLNFTYVPEETIREGVRRLAETIKEE 411
>pdb|3ASA|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
pdb|3ASB|A Chain A, Crystal Structure Of Plp-Bound Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
Length = 400
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 23/193 (11%)
Query: 87 GLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYA 146
GLP RQ +++ +G D I + GA + + P + P Y
Sbjct: 76 GLPALRQKLSEDFYRG-----FVDAKEIFISDGAK-VDLFRLLSFFGPNQTVAIQDPSYP 129
Query: 147 AFDRDLSWRTGV-QIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLG 205
A+ D++ TG +I+ + C N F E ++ I+I L + +P+NP G
Sbjct: 130 AY-LDIARLTGAKEIIALPCLQENAF---------FPEFPEDTHIDI--LCLCSPNNPTG 177
Query: 206 TTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYS 265
T L++D L+++V + + I ++ D Y +T S P S+ + I E+ R I S
Sbjct: 178 TVLNKDQLRAIVHYAIEHEILILFDAAY-STFISDP---SLPKSIFEIPDARFCAIEINS 233
Query: 266 LSKDMGLPGFRVG 278
SK +G G R+G
Sbjct: 234 FSKPLGFAGIRLG 246
>pdb|1W7L|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
pdb|1W7M|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With L-Phe
Length = 422
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/290 (20%), Positives = 119/290 (41%), Gaps = 29/290 (10%)
Query: 87 GLPEFRQAVAKFMGKGRGGRVTFDPDR-IVMGGGATGANELIMFCLANPGDAFLVPSPYY 145
G P + +A F G+ G + DP R +++ G GA L + GD ++ P++
Sbjct: 68 GYPPLTKILASFFGELLGQEI--DPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFF 125
Query: 146 AAFDRDLSWRTGVQIV------PVH---CDISNNFKITREALEAAYERAQEASINIKGLI 196
++ G + P+ S+N+++ E A + + K L+
Sbjct: 126 DCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLD------PMELAGKFTSRTKALV 179
Query: 197 ITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCN 256
+ P+NPLG R+ L+ + S ++ + DE+Y V+ + S+A + +
Sbjct: 180 LNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWE-- 237
Query: 257 RDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKM--SSFGLVSSQTQYLLASMLSD 314
R L I S G++VG V D ++ R + +S +Q+Q +A
Sbjct: 238 RTL--TIGSAGXTFSATGWKVGWVLG-PDHIMKHLRTVHQNSVFHCPTQSQAAVAESFER 294
Query: 315 DEFV----DNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDL 360
++ + ++ V+ + + + + + L+ VG+ L F D+
Sbjct: 295 EQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVGLKPLIPQGSYFLITDI 344
>pdb|3L8A|A Chain A, Crystal Structure Of Metc From Streptococcus Mutans
pdb|3L8A|B Chain B, Crystal Structure Of Metc From Streptococcus Mutans
Length = 421
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 122/314 (38%), Gaps = 27/314 (8%)
Query: 114 IVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKI 173
I+ G A + + + GDA L+ SP Y F R + H + N+ +I
Sbjct: 122 ILFIDGVVPAISIALQAFSEKGDAVLINSPVYYPFARTIRLND-------HRLVENSLQI 174
Query: 174 TREALEAAYERAQEASI--NIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDE 231
E +E+ ++ I N+K ++ +P NP G D D L + + LV DE
Sbjct: 175 INGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDE 234
Query: 232 IYAATVFSSPKFTSVAEVIQEMDCN-RDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNC 290
I+ F + + +D + +D I+ S +K + G + N+++
Sbjct: 235 IHQDLAL----FGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESL--- 287
Query: 291 GRKMSSFGLVSSQTQYLLASMLSDD---EFVDNFLVETSKRLAKRHHNFTKGLE-QVGIN 346
RK L ++Q + M++ ++ +L E + K LE + I
Sbjct: 288 RRKFQYRQLANNQHEVPTVGMIATQAAFQYGKPWLEELKTVIEGNIKLVIKELEAKTKIK 347
Query: 347 CLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFA 406
++ W+D + L + N+ K+ ++ G+ F E +F
Sbjct: 348 VMEPEGTYLVWLDF-----SAYAIAQPQLSEKLQNEAKVVLNDGAHF-GKEGKYFARLNV 401
Query: 407 NMDDDTLQVALNRI 420
+T+Q AL+RI
Sbjct: 402 ATPKNTVQEALSRI 415
>pdb|3FVS|A Chain A, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVS|B Chain B, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVU|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVU|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVX|A Chain A, Human Kynurenine Aminotransferase I In Complex With Tris
pdb|3FVX|B Chain B, Human Kynurenine Aminotransferase I In Complex With Tris
Length = 422
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/290 (20%), Positives = 119/290 (41%), Gaps = 29/290 (10%)
Query: 87 GLPEFRQAVAKFMGKGRGGRVTFDPDR-IVMGGGATGANELIMFCLANPGDAFLVPSPYY 145
G P + +A F G+ G + DP R +++ G GA L + GD ++ P++
Sbjct: 68 GYPPLTKILASFFGELLGQEI--DPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFF 125
Query: 146 AAFDRDLSWRTGVQIV------PVH---CDISNNFKITREALEAAYERAQEASINIKGLI 196
++ G + P+ S+N+++ E A + + K L+
Sbjct: 126 DCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLD------PMELAGKFTSRTKALV 179
Query: 197 ITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCN 256
+ P+NPLG R+ L+ + S ++ + DE+Y V+ + S+A + +
Sbjct: 180 LNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWE-- 237
Query: 257 RDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKM--SSFGLVSSQTQYLLASMLSD 314
R L I S G++VG V D ++ R + +S +Q+Q +A
Sbjct: 238 RTL--TIGSAGXTFSATGWKVGWVLG-PDHIMKHLRTVHQNSVFHCPTQSQAAVAESFER 294
Query: 315 DEFV----DNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDL 360
++ + ++ V+ + + + + + L+ VG+ + F D+
Sbjct: 295 EQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVGLKPIIPQGSYFLITDI 344
>pdb|2O0R|A Chain A, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
pdb|2O0R|B Chain B, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
Length = 411
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 122/333 (36%), Gaps = 31/333 (9%)
Query: 107 VTFDPD-RIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQI-VPVH 164
V +DP+ +++ GAT A + L PG L+ P+Y ++ ++ ++ VP+
Sbjct: 81 VDYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLV 140
Query: 165 CDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKN 224
D F + +AL A + + LII +P NP G L L ++ N
Sbjct: 141 PD-GRGFALDADALRRA------VTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAAN 193
Query: 225 IHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFN 284
+ ++ DE+Y VF + +A D + I S + G+++G
Sbjct: 194 LVVITDEVYEHLVFDHARHLPLA----GFDGMAERTITISSAAXMFNCTGWKIGWACGPA 249
Query: 285 DTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVG 344
+ + V ++ D E D ++ L R GL ++G
Sbjct: 250 ELIAGVRAAKQYLSYVGGAPFQPAVALALDTE--DAWVAALRNSLRARRDRLAAGLTEIG 307
Query: 345 INCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPG----- 399
S F D R L + + E AL V + P S+F G
Sbjct: 308 FAVHDSYGTYFLCADPRPLGYDDSTEFCAAL----PEKVGVAAIPMSAFCDPAAGQASQQ 363
Query: 400 ---W---FRVCFANMDDDTLQVALNRIAAFVQQ 426
W R F DDTL A+ R++ ++
Sbjct: 364 ADVWNHLVRFTFCKR-DDTLDEAIRRLSVLAER 395
>pdb|4DGT|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630 Crystallized With
Magnesium Formate
pdb|4DGT|B Chain B, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630 Crystallized With
Magnesium Formate
pdb|4DQ6|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630
pdb|4DQ6|B Chain B, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630
Length = 391
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 77/390 (19%), Positives = 151/390 (38%), Gaps = 58/390 (14%)
Query: 53 DLIKDWITKNPY-ASICTAEGVEVFKDIAIFQDYHGLPE-FRQAVAKFMGKGRGGRVTFD 110
DL+ W+ + A+ C + ++ + I+ Y P+ + +++ ++ + ++
Sbjct: 33 DLLPMWVADMDFKAAPCIIDSLKNRLEQEIY-GYTTRPDSYNESIVNWLYRRHNWKIK-- 89
Query: 111 PDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNN 170
+ ++ G A L++ L D ++ P Y+ F+ + I+ + N
Sbjct: 90 SEWLIYSPGVIPAISLLINELTKANDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENG 149
Query: 171 FKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCD 230
I YE + ++K I+ NP NP+G +D LK L N+ ++ D
Sbjct: 150 NYIM------DYEDIENKIKDVKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISD 203
Query: 231 EIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIV-------YSF 283
EI++ + K +A + +E + N + +K + G + V Y
Sbjct: 204 EIHSDIILKKHKHIPMASISKEFEKN---TITCMAPTKTFNIAGLQSSYVVLPDEKDYKL 260
Query: 284 ND---TVVNCGRKMSSFGLVSSQTQY---------LLASMLSDDEFVDNFLVETSKRLAK 331
D T ++ R + F LV+++ Y L + S+ +F ++ E +L
Sbjct: 261 LDDAFTRIDIKRN-NCFSLVATEASYNNGESWLESFLEYLESNIDFAIKYINENMPKLKV 319
Query: 332 RHHNFTKGLEQVGINCLKSNAGLFFWMDLRHL-LKEKTLEGEIALWRTIVNDVKLNVSPG 390
R K W+D L L ++ LE +V K+ ++ G
Sbjct: 320 R----------------KPEGTYLLWVDFSALGLSDEELES------ILVQKGKVALNQG 357
Query: 391 SSFQCTEPGWFRVCFANMDDDTLQVALNRI 420
+SF G+ R+ A L+ AL RI
Sbjct: 358 NSFGIGGSGYQRINLA-CPRSMLEEALIRI 386
>pdb|3FTB|A Chain A, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|B Chain B, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|D Chain D, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|E Chain E, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
Length = 361
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 102/241 (42%), Gaps = 38/241 (15%)
Query: 114 IVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKI 173
IV+G GA+ EL + + L+ P YA ++ + + + GV +V + D
Sbjct: 81 IVLGNGASEIIELSISLF----EKILIIVPSYAEYEIN-AKKHGVSVVFSYLD------- 128
Query: 174 TREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIY 233
E + YE ++ +II NP+NP G ++++ ++ +K ++ DE
Sbjct: 129 --ENMCIDYEDIISKIDDVDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDE-- 184
Query: 234 AATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTV------ 287
A F+ +S I+ C + II +++K +PG R G + N +
Sbjct: 185 AFIEFTGDPSSSFVGEIKNYSC----LFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKA 240
Query: 288 ------VNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETS-----KRLAKRHHNF 336
+NC +M++ + T Y+ S+L + F+ E + KR+ H NF
Sbjct: 241 KQNPWNINCFAEMAAINCL-KDTNYIEESLLWIKKERKRFIEELNKIGFIKRVFSPHANF 299
Query: 337 T 337
Sbjct: 300 V 300
>pdb|1YIY|A Chain A, Aedes Aegypti Kynurenine Aminotransferase
pdb|1YIY|B Chain B, Aedes Aegypti Kynurenine Aminotransferase
pdb|2R5C|B Chain B, Aedes Kynurenine Aminotransferase In Complex With Cysteine
pdb|2R5E|A Chain A, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
pdb|2R5E|B Chain B, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
Length = 429
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 137/360 (38%), Gaps = 48/360 (13%)
Query: 87 GLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYA 146
G P QA++K + R +++ GA A + + GD ++ P++
Sbjct: 78 GHPRLVQALSKLYSQ-LVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFD 136
Query: 147 AFDRDLSWRTGV-QIVPVHCD------ISNNFKITREALEAAYERAQEASINIKGLIITN 199
++ + G+ + +P+ + S ++ + LEA + K +II
Sbjct: 137 CYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNE------KTKMIIINT 190
Query: 200 PSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDL 259
P NPLG +DR L+ + + N+ V DE+Y VF F + R +
Sbjct: 191 PHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEP--FEHIRICTLPGMWERTI 248
Query: 260 IHIIYSLSKDMGLPGFRVGIVYS-----------FNDTVVNCGRKMSSFGLVSSQTQYLL 308
I S K L G+++G Y + V C + V +T+ L
Sbjct: 249 --TIGSAGKTFSLTGWKIGWAYGPEALLKNLQMVHQNCVYTCATPIQEAIAVGFETE--L 304
Query: 309 ASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFF---WMDLRH--- 362
+ S + + ++ + + +AKR + L +VG+N G F W L
Sbjct: 305 KRLKSPECYFNSI---SGELMAKRDY-MASFLAEVGMNPTVPQGGYFMVADWSSLDSKVD 360
Query: 363 LLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPG------WFRVCFANMDDDTLQVA 416
L +E + + + V L P S+F +EP + R CF D++ + A
Sbjct: 361 LTQETDARKDYRFTKWMTKSVGLQGIPPSAFY-SEPNKHLGEDFVRYCFFKKDENLQKAA 419
>pdb|2ZY2|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
Length = 544
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 105/228 (46%), Gaps = 30/228 (13%)
Query: 161 VPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFI 220
VP+H D N ++ + +A ++ ++ + I NPSNP +D+ +L + + +
Sbjct: 220 VPIHADPDNGWQYS----DAELDKLKDPDVKI--FFCVNPSNPPSVKMDQRSLDRVRAIV 273
Query: 221 NDK--NIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVG 278
++ ++ ++ D++Y + +F S+ V C R+ + ++YS SK G G+R+G
Sbjct: 274 AEQRPDLLILTDDVYGTF---ADEFQSLFSV-----CPRNTL-LVYSFSKYFGATGWRLG 324
Query: 279 IVYSFNDTVVNCGRKM---SSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHN 335
++ + D V + S+ + + + LL + S +F+D LV S+ +A H
Sbjct: 325 VIAAHKDNVFDHALSQLPESAKKALDHRYRSLLPDVRS-LKFIDR-LVADSRVVALNHTA 382
Query: 336 FTKGLEQVGINCLKSNAGLFFWMD----LRHLLKEKTLEGEIALWRTI 379
+QV + LF MD + LK+ E L+R +
Sbjct: 383 GLSTPQQVQMVLFS----LFALMDEADAYKQALKQLIRRREATLYREL 426
>pdb|2DOU|A Chain A, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
pdb|2DOU|B Chain B, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
Length = 376
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 106/264 (40%), Gaps = 31/264 (11%)
Query: 101 KGRGGRVTFDPDR--IVMGGGATGANELIMFCLANPGDAFLVPS---PYYAAFDRDLSWR 155
+GR G V DP R + + G G L++ L P D L+P P Y R S R
Sbjct: 77 EGRYG-VGLDPRREALALIGSQEGLAHLLL-ALTEPEDLLLLPEVAYPSYFGAARVASLR 134
Query: 156 TGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKS 215
T ++P+ D + K E + +EA + L++ P+NP G D +
Sbjct: 135 T--FLIPLREDGLADLKAVPEGV------WREAKV----LLLNYPNNPTGAVADWGYFEE 182
Query: 216 LVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGF 275
+ + L+ D Y V+ + +A + ++ + ++SLSK L GF
Sbjct: 183 ALGLARKHGLWLIHDNPYVDQVYEGEAPSPLA-----LPGAKERVVELFSLSKSYNLAGF 237
Query: 276 RVGIVYSFNDTVVNCGR--KMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRH 333
R+G + + R + F + + + ++ + E V + ++ +R
Sbjct: 238 RLGFALGSEEALARLERVKGVIDFNQYAGVLRMGVEALKTPKEVVRGY----ARVYRERA 293
Query: 334 HNFTKGLEQVGINCLKSNAGLFFW 357
+ L+ V ++ L A ++ W
Sbjct: 294 LGMAEALKGV-LSLLPPRATMYLW 316
>pdb|3E2Z|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|3E2Y|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
pdb|3E2Y|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
Length = 410
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 116/285 (40%), Gaps = 14/285 (4%)
Query: 87 GLPEFRQAVAKFMGKGRGGRVTFDP-DRIVMGGGATGANELIMFCLANPGDAFLVPSPYY 145
G P +A++ GK ++ DP + I++ GA G+ + L +PGD ++ P+Y
Sbjct: 62 GHPALVKALSCLYGKIYQRQI--DPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFY 119
Query: 146 AAFDRDLSWRTGVQI-VPVHCDISNNFKITREALE-AAYERAQEASINIKGLIITNPSNP 203
++ + V + +P+ ++ K T E + S K +I+ P NP
Sbjct: 120 DCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNP 179
Query: 204 LGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHII 263
LG R L+ + + + DE+Y V++ +A + + R + I
Sbjct: 180 LGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWE--RTI--TI 235
Query: 264 YSLSKDMGLPGFRVGIVYSFNDTVVNCGR-KMSSFGLVSSQTQYLLA-SMLSDDEFVDN- 320
S K + G+++G + + + +SF ++ Q LA + D + +D+
Sbjct: 236 GSAGKTFSVTGWKLGWSIGPAHLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDP 295
Query: 321 --FLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHL 363
+ K L + + L VG+ + + G F D+ L
Sbjct: 296 ECYFNSLPKELEVKRDRMVRLLNSVGLKPIVPDGGYFIIADVSSL 340
>pdb|1YIZ|A Chain A, Aedes Aegypti Kynurenine Aminotrasferase
pdb|1YIZ|B Chain B, Aedes Aegypti Kynurenine Aminotrasferase
pdb|2R5C|A Chain A, Aedes Kynurenine Aminotransferase In Complex With Cysteine
Length = 429
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/360 (20%), Positives = 136/360 (37%), Gaps = 48/360 (13%)
Query: 87 GLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYA 146
G P QA++K + R +++ GA A + + GD ++ P++
Sbjct: 78 GHPRLVQALSKLYSQ-LVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFD 136
Query: 147 AFDRDLSWRTGV-QIVPVHCD------ISNNFKITREALEAAYERAQEASINIKGLIITN 199
++ + G+ + +P+ + S ++ + LEA + K +II
Sbjct: 137 CYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNE------KTKMIIINT 190
Query: 200 PSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDL 259
P NPLG +DR L+ + + N+ V DE+Y VF F + R +
Sbjct: 191 PHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEP--FEHIRICTLPGMWERTI 248
Query: 260 IHIIYSLSKDMGLPGFRVGIVYS-----------FNDTVVNCGRKMSSFGLVSSQTQYLL 308
I S L G+++G Y + V C + V +T+ L
Sbjct: 249 --TIGSAGXTFSLTGWKIGWAYGPEALLKNLQMVHQNCVYTCATPIQEAIAVGFETE--L 304
Query: 309 ASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFF---WMDLRH--- 362
+ S + + ++ + + +AKR + L +VG+N G F W L
Sbjct: 305 KRLKSPECYFNSI---SGELMAKRDY-MASFLAEVGMNPTVPQGGYFMVADWSSLDSKVD 360
Query: 363 LLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPG------WFRVCFANMDDDTLQVA 416
L +E + + + V L P S+F +EP + R CF D++ + A
Sbjct: 361 LTQETDARKDYRFTKWMTKSVGLQGIPPSAFY-SEPNKHLGEDFVRYCFFKKDENLQKAA 419
>pdb|3E2F|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2F|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2Z|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|2ZJG|A Chain A, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
pdb|2ZJG|B Chain B, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
Length = 410
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 71/166 (42%), Gaps = 5/166 (3%)
Query: 87 GLPEFRQAVAKFMGKGRGGRVTFDP-DRIVMGGGATGANELIMFCLANPGDAFLVPSPYY 145
G P +A++ GK ++ DP + I++ GA G+ + L +PGD ++ P+Y
Sbjct: 62 GHPALVKALSCLYGKIYQRQI--DPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFY 119
Query: 146 AAFDRDLSWRTGVQI-VPVHCDISNNFKITREALE-AAYERAQEASINIKGLIITNPSNP 203
++ + V + +P+ ++ K T E + S K +I+ P NP
Sbjct: 120 DCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNP 179
Query: 204 LGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEV 249
LG R L+ + + + DE+Y V++ +A +
Sbjct: 180 LGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATL 225
>pdb|3F6T|A Chain A, Crystal Structure Of Aspartate Aminotransferase (E.C.
2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus
Ncfm At 2.15 A Resolution
pdb|3F6T|B Chain B, Crystal Structure Of Aspartate Aminotransferase (E.C.
2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus
Ncfm At 2.15 A Resolution
Length = 533
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 21/154 (13%)
Query: 131 LANPGDAFLVPSPYYAAFDR--DLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEA 188
L GD + P + + R +L V+ V +H N+++I +E + +
Sbjct: 189 LLKKGDKIAINEPIFTPYLRIPELKDYELVE-VDLHSYEKNDWEIEPNEIEKLKDPS--- 244
Query: 189 SINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKN--IHLVCDEIYAATVFSSPKFTSV 246
IK LI+ NP+NP D + L ++ + +KN + ++ DE+Y A V P F S+
Sbjct: 245 ---IKALIVVNPTNPTSKEFDTNALNAIKQAV-EKNPKLXIISDEVYGAFV---PNFKSI 297
Query: 247 AEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIV 280
V+ ++YS S G G+R+G++
Sbjct: 298 YSVVPYN------TXLVYSYSXLFGCTGWRLGVI 325
>pdb|1VP4|A Chain A, Crystal Structure Of A Putative Aminotransferase (Tm1131)
From Thermotoga Maritima Msb8 At 1.82 A Resolution
pdb|1VP4|B Chain B, Crystal Structure Of A Putative Aminotransferase (Tm1131)
From Thermotoga Maritima Msb8 At 1.82 A Resolution
Length = 425
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/305 (20%), Positives = 119/305 (39%), Gaps = 25/305 (8%)
Query: 71 EGVEVFKDIAIFQDYH---------GLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGAT 121
E E+ K+I I ++YH G P +Q + K + + G D D ++ G+
Sbjct: 62 ELAEIAKEI-IEKEYHYTLQYSTTEGDPVLKQQILKLLERXYG-ITGLDEDNLIFTVGSQ 119
Query: 122 GANELIMFCLANPGDAFLVPSP-YYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEA 180
A +LI + ++ P Y A + + +VP+ D + + L
Sbjct: 120 QALDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPLEDD-GXDLNVLERKLSE 178
Query: 181 AYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSS 240
+ + + +++N NP G T + K+LV ++ +V D+ Y A +
Sbjct: 179 FDKNGKIKQVKFI-YVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEG 237
Query: 241 PKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLV 300
+ ++ + + ++ + SK + PG R+G V + + + S L
Sbjct: 238 ETVDPIFKI-----GGPERVVLLNTFSKVLA-PGLRIGXVAGSKEFIRKIVQAKQSADLC 291
Query: 301 SSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-----GINCLKSNAGLF 355
S + LA+ + + L T + ++ LE+ G+ +KS GLF
Sbjct: 292 SPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVXLNALEEYFSDIPGVKWVKSEGGLF 351
Query: 356 FWMDL 360
W+ L
Sbjct: 352 IWLTL 356
>pdb|1LKC|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Salmonella Enterica
pdb|1LC5|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica In Its Apo State
pdb|1LC7|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With A
Substrate
pdb|1LC8|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With Its
Reaction Intermediate
Length = 364
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 97/224 (43%), Gaps = 38/224 (16%)
Query: 73 VEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLA 132
+E + D F + L Q A + I+ G G T + +F +A
Sbjct: 53 IERYPDADYFHLHQALARHHQVPASW---------------ILAGNGETES----IFTVA 93
Query: 133 N---PGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEAS 189
+ P A +V +P +A + R L+ ++G +I ++ +++T LEA +
Sbjct: 94 SGLKPRRAMIV-TPGFAEYGRALA-QSGCEIRRWSLREADGWQLTDAILEAL-------T 144
Query: 190 INIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEV 249
++ L + P+NP G +R L+++ NI+L+ DE + + P T
Sbjct: 145 PDLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFI---PHETGFIPA 201
Query: 250 IQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRK 293
+++ I ++ SL+K +PG R+G + + +D + R+
Sbjct: 202 LKD----NPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRR 241
>pdb|2ZY3|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|B Chain B, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|C Chain C, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|D Chain D, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|E Chain E, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|F Chain F, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|B Chain B, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|C Chain C, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|D Chain D, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|E Chain E, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|F Chain F, Dodecameric L-Aspartate Beta-Decarboxylase
Length = 546
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 103/233 (44%), Gaps = 32/233 (13%)
Query: 157 GVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSL 216
++ V ++ D S N++ L+ + A IK NPSNP +D+ +L+ +
Sbjct: 217 ALEEVAINADPSLNWQYPDSELDKLKDPA------IKIFFCVNPSNPPSVKMDQRSLERV 270
Query: 217 VSFINDK--NIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPG 274
+ + + ++ ++ D++Y + F S+ + C + + ++YS SK G G
Sbjct: 271 RNIVAEHRPDLMILTDDVYGTF---ADDFQSLFAI-----CPENTL-LVYSFSKYFGATG 321
Query: 275 FRVGIVYSFNDTVVNCG-RKMSSFGLVSSQTQYLLASMLSDD---EFVDNFLVETSKRLA 330
+R+G+V + V + K+ V+ +Y S+L D +F+D LV S+ +A
Sbjct: 322 WRLGVVAAHQQNVFDLALDKLQESEKVALDHRY--RSLLPDVRSLKFIDR-LVADSRAVA 378
Query: 331 KRHHNFTKGLEQVGINCLKSNAGLFFWMD----LRHLLKEKTLEGEIALWRTI 379
H +QV + LF MD +H LK+ E L+R +
Sbjct: 379 LNHTAGLSTPQQVQMALF----SLFALMDEADEYKHTLKQLIRRRETTLYREL 427
>pdb|1U08|A Chain A, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function.
pdb|1U08|B Chain B, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function
Length = 386
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 130/347 (37%), Gaps = 44/347 (12%)
Query: 87 GLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYA 146
G+ R+A+A+ + G + D D I + GAT A + L GD + P Y
Sbjct: 68 GVQALREAIAQKTERLYGYQPDADSD-ITVTAGATEALYAAITALVRNGDEVICFDPSYD 126
Query: 147 AFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYER------AQEASINIKGLIITNP 200
++ ++ G+ + R AL+ + R A S + +I+ P
Sbjct: 127 SYAPAIALSGGI--------------VKRMALQPPHFRVDWQEFAALLSERTRLVILNTP 172
Query: 201 SNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLI 260
NP T + +L I I ++ DE+Y FS SV Q R+
Sbjct: 173 HNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQL----RERA 228
Query: 261 HIIYSLSKDMGLPGFRVGIVYSFNDTVVNCG-RKMSSFGLVSSQT--QYLLASMLSDDEF 317
+ S K + G++VG Y ++ RK+ + S T Q LA ML +
Sbjct: 229 VAVSSFGKTYHMTGWKVG--YCVAPAPISAEIRKVHQYLTFSVNTPAQLALADMLRAEP- 285
Query: 318 VDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEG-EIALW 376
+++L KR L + + L F +D + TL+ E W
Sbjct: 286 -EHYLALPDFYRQKR-DILVNALNESRLEILPCEGTYFLLVDYSAV---STLDDVEFCQW 340
Query: 377 RTIVNDVKLNVSPGSSFQCTEP---GWFRVCFANMDDDTLQVALNRI 420
T + V P S F C +P R+CFA + TL A R+
Sbjct: 341 LTQEHGVA--AIPLSVF-CADPFPHKLIRLCFAK-KESTLLAAAERL 383
>pdb|2ZY5|A Chain A, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|B Chain B, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|C Chain C, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|D Chain D, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|E Chain E, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|F Chain F, R487a Mutant Of L-Aspartate Beta-Decarboxylase
Length = 546
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 103/233 (44%), Gaps = 32/233 (13%)
Query: 157 GVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSL 216
++ V ++ D S N++ L+ + A IK NPSNP +D+ +L+ +
Sbjct: 217 ALEEVAINADPSLNWQYPDSELDKLKDPA------IKIFFCVNPSNPPSVKMDQRSLERV 270
Query: 217 VSFINDK--NIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPG 274
+ + + ++ ++ D++Y + F S+ + C + + ++YS SK G G
Sbjct: 271 RNIVAEHRPDLMILTDDVYGTF---ADDFQSLFAI-----CPENTL-LVYSFSKYFGATG 321
Query: 275 FRVGIVYSFNDTVVNCG-RKMSSFGLVSSQTQYLLASMLSDD---EFVDNFLVETSKRLA 330
+R+G+V + V + K+ V+ +Y S+L D +F+D LV S+ +A
Sbjct: 322 WRLGVVAAHQQNVFDLALDKLQESEKVALDHRY--RSLLPDVRSLKFIDR-LVADSRAVA 378
Query: 331 KRHHNFTKGLEQVGINCLKSNAGLFFWMD----LRHLLKEKTLEGEIALWRTI 379
H +QV + LF MD +H LK+ E L+R +
Sbjct: 379 LNHTAGLSTPQQVQMALF----SLFALMDEADEYKHTLKQLIRRRETTLYREL 427
>pdb|3T32|A Chain A, Crystal Structure Of A Putative C-S Lyase From Bacillus
Anthracis
pdb|3T32|B Chain B, Crystal Structure Of A Putative C-S Lyase From Bacillus
Anthracis
Length = 383
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 58/140 (41%), Gaps = 6/140 (4%)
Query: 114 IVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKI 173
IV G A + ++ LV P Y F ++ V ++ + I
Sbjct: 85 IVFSAGIVPALSTSIQAFTKENESVLVQPPIYPPFFEXVTTNNRQLCVSPLQKQNDTYAI 144
Query: 174 TREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIY 233
E LE +++ +K ++ +P NP+G ++ L L S N+ +V DEI+
Sbjct: 145 DFEHLEKQFQQG------VKLXLLCSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIH 198
Query: 234 AATVFSSPKFTSVAEVIQEM 253
+ +++ T A + +E+
Sbjct: 199 SDIIYADHTHTPFASLSEEL 218
>pdb|3LY1|A Chain A, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|B Chain B, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|C Chain C, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|D Chain D, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
Length = 354
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 76/188 (40%), Gaps = 14/188 (7%)
Query: 169 NNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLV 228
+N+ E L+AA SI + + NP+NP GT D ++ ++ N +
Sbjct: 123 DNWAFDIEGLKAAVAAYSGPSI----VYLVNPNNPTGTITPADVIEPWIAS-KPANTXFI 177
Query: 229 CDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVV 288
DE YA V + P+F S++ I + N I ++ + SK G RVG + +
Sbjct: 178 VDEAYAEFV-NDPRFRSISPXITQGAEN---IILLKTFSKIHAXAGXRVGYAVAHPTVIA 233
Query: 289 NCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCL 348
GR ++ + S LAS +D F+ + K K LE + + L
Sbjct: 234 LXGRYVAGEKINFSGVDAALASX-NDSAFI----TYSKKSNDVSRQILLKALEDLKLPYL 288
Query: 349 KSNAGLFF 356
S F
Sbjct: 289 PSEGNFVF 296
>pdb|3FDB|A Chain A, Crystal Structure Of A Putative Plp-Dependent
Beta-Cystathionase (Aecd, Dip1736) From Corynebacterium
Diphtheriae At 1.99 A Resolution
Length = 377
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 95/246 (38%), Gaps = 34/246 (13%)
Query: 193 KGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQE 252
+ +++ NP NPLG + L L + + ++ DEI+A VF + T A V
Sbjct: 152 RSILLCNPYNPLGXVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDG-QHTVAAGV--- 207
Query: 253 MDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKM--------SSFGLVSSQT 304
D + I + S + G + + N + +++ S+ GL++++
Sbjct: 208 SDTAASVCITITAPSXAWNIAGLKCAQIIFSNPSDAEHWQQLSPVIKDGASTLGLIAAEA 267
Query: 305 QYLLASMLSDDEFVDNFLVETSKRLAKRH----HNFTKGLEQVGINCLKSNAGLFFWMDL 360
Y + +FL + L H H K + G A W+D
Sbjct: 268 AY---------RYGTDFLNQEVAYLKNNHDFLLHEIPKRIP--GAKITPXQATYLXWIDF 316
Query: 361 RHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRI 420
R + T+EG + + K+ + G+ F G+ R+ FA + L+ A++R
Sbjct: 317 R----DTTIEGSPS--EFFIEKAKVAXNDGAWFGEDGTGFCRLNFAT-SREVLEEAIDRX 369
Query: 421 AAFVQQ 426
A V
Sbjct: 370 AKAVSH 375
>pdb|1FG3|A Chain A, Crystal Structure Of L-Histidinol Phosphate
Aminotransferase Complexed With L-Histidinol
pdb|1FG7|A Chain A, Crystal Structure Of L-Histidinol Phosphate
Aminotransferase With Pyridoxal-5'-Phosphate
Length = 356
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 84/209 (40%), Gaps = 21/209 (10%)
Query: 111 PDRIVMGGGATGANELIMFCLANPG-DAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISN 169
P+++++ GA EL++ PG DA L P Y + + + V C
Sbjct: 75 PEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGXYS------VSAETIGVECRTVP 128
Query: 170 NFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVC 229
+ L+ ++ +K + + +P+NP G ++ ++L+ K I +V
Sbjct: 129 TLDNWQLDLQGISDKLD----GVKVVYVCSPNNPTGQLINPQDFRTLLELTRGKAI-VVA 183
Query: 230 DEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVN 289
DE Y + +AE + I+ +LSK L G R G + N+ V+N
Sbjct: 184 DEAYIEFCPQASLAGWLAEYPH--------LAILRTLSKAFALAGLRCGFTLA-NEEVIN 234
Query: 290 CGRKMSSFGLVSSQTQYLLASMLSDDEFV 318
K+ + +S+ + A LS V
Sbjct: 235 LLXKVIAPYPLSTPVADIAAQALSPQGIV 263
>pdb|3DZZ|A Chain A, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
pdb|3DZZ|B Chain B, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
Length = 391
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 66/165 (40%), Gaps = 12/165 (7%)
Query: 85 YHGLP-EFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSP 143
Y +P E+ +AVA + R D V G A + +PGD LV P
Sbjct: 60 YESVPAEYYKAVADWEEIEHRARPK--EDWCVFASGVVPAISAXVRQFTSPGDQILVQEP 117
Query: 144 YYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNP 203
Y F + G +++ N ++ ++ A + A+ +++ + NP NP
Sbjct: 118 VYNXFYSVIE-GNGRRVISSDLIYEN----SKYSVNWADLEEKLATPSVRXXVFCNPHNP 172
Query: 204 LGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFS----SPKFT 244
+G + +K + + L+ DEI+ V + +P FT
Sbjct: 173 IGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFT 217
>pdb|1GEW|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With Pyridoxal 5'-Phosphate
pdb|1GEX|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With Histidinol-Phosphate
pdb|1GEY|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With N-(5'-Phosphopyridoxyl)-L-Glutamate
pdb|1IJI|A Chain A, Crystal Structure Of L-histidinol Phosphate
Aminotransferase With Plp
Length = 356
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 87/212 (41%), Gaps = 27/212 (12%)
Query: 111 PDRIVMGGGATGANELIMFCLANPG-DAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDIS- 168
P+++++ GA EL++ PG DA L P Y + + + V C
Sbjct: 75 PEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYS------VSAETIGVECRTVP 128
Query: 169 --NNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIH 226
+N+++ + + + +K + + +P+NP G ++ ++L+ K I
Sbjct: 129 TLDNWQLDLQGISDKLD-------GVKVVYVCSPNNPTGQLINPQDFRTLLELTRGKAI- 180
Query: 227 LVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDT 286
+V DE Y + +AE + I+ +LSK L G R G + N+
Sbjct: 181 VVADEAYIEFCPQASLAGWLAEYPH--------LAILRTLSKAFALAGLRCGFTLA-NEE 231
Query: 287 VVNCGRKMSSFGLVSSQTQYLLASMLSDDEFV 318
V+N K+ + +S+ + A LS V
Sbjct: 232 VINLLMKVIAPYPLSTPVADIAAQALSPQGIV 263
>pdb|3FDD|A Chain A, The Crystal Structure Of The Pseudomonas Dacunhae
Aspartate-Beta- Decarboxylase Reveals A Novel Oligomeric
Assembly For A Pyridoxal-5- Phosphate Dependent Enzyme
Length = 533
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 83/196 (42%), Gaps = 22/196 (11%)
Query: 192 IKGLIITNPSNPLGTTLDRDTLKSLVSFINDK--NIHLVCDEIYAATVFSSPKFTSVAEV 249
IK NPSNP +D +L+ + + + ++ ++ D++Y + F S+ +
Sbjct: 246 IKIFFCVNPSNPPSVKMDERSLERVRKIVAEHRPDLMILTDDVYGTF---ADGFQSLFAI 302
Query: 250 IQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVN--CGRKMSSFGLVSSQTQYL 307
C + + ++YS SK G G+R+G+V + + + + GR S
Sbjct: 303 -----CPANTL-LVYSFSKYFGATGWRLGVVAAHKENIFDLALGRLPESEKTALDDRYRS 356
Query: 308 LASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMD----LRHL 363
L + +F+D LV S+ +A H +QV + LF MD +H
Sbjct: 357 LLPDVRSLKFLDR-LVADSRAVALNHTAGLSTPQQVQMTLFS----LFALMDESDQYKHT 411
Query: 364 LKEKTLEGEIALWRTI 379
LK+ E L+R +
Sbjct: 412 LKQLIRRREATLYREL 427
>pdb|3NRA|A Chain A, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
pdb|3NRA|B Chain B, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
Length = 407
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 73/171 (42%), Gaps = 8/171 (4%)
Query: 112 DRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNF 171
D +++ G GA L + GD + P Y A + + + G + VPV D +
Sbjct: 103 DGLIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVEFFEG-EXVPVQLDYVSAD 161
Query: 172 KITREALE-AAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCD 230
+ TR L+ E A +A + + +NP+NP G + + + + ++ D
Sbjct: 162 E-TRAGLDLTGLEEAFKAGARV--FLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIAD 218
Query: 231 EIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVY 281
++Y+ ++ +T + E + + + I S L G+R+G+ +
Sbjct: 219 QLYSRLRYAGASYT---HLRAEAAVDAENVVTIXGPSXTESLSGYRLGVAF 266
>pdb|3G7Q|A Chain A, Crystal Structure Of Valine-Pyruvate Aminotransferase Avta
(Np_462565.1) From Salmonella Typhimurium Lt2 At 1.80 A
Resolution
Length = 417
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 195 LIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMD 254
+ ++ P+NP G + + L L N NI LV D Y F F+ +
Sbjct: 184 ICVSRPTNPTGNVITDEELXKLDRLANQHNIPLVIDNAYGVP-FPGIIFSEARPL----- 237
Query: 255 CNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVV 288
N ++I + SLSK +GLPG R GI+ + + T+
Sbjct: 238 WNPNII-LCXSLSK-LGLPGSRCGIIIANDKTIT 269
>pdb|3EZS|A Chain A, Crystal Structure Of Aminotransferase Aspb (Np_207418.1)
From Helicobacter Pylori 26695 At 2.19 A Resolution
pdb|3EZS|B Chain B, Crystal Structure Of Aminotransferase Aspb (Np_207418.1)
From Helicobacter Pylori 26695 At 2.19 A Resolution
Length = 376
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 14/156 (8%)
Query: 126 LIMFCLANPGDAFLVPSPYYAAFDRDLSW-RTGVQIVPVHCDISNNFKITREALEAAYER 184
++F NP A+ P+P+Y ++ + + + P+ + N+F + E
Sbjct: 101 FVLFDYQNPTIAY--PNPFYQIYEGAAKFIKAKSLLXPLTKE--NDFTPSLNEKEL---- 152
Query: 185 AQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFT 244
QE + +I+ +P+NP G TL + L S V + L+ DE Y+ ++P +
Sbjct: 153 -QEVDL----VILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPS 207
Query: 245 SVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIV 280
+ + + +I+SLSK PG R G +
Sbjct: 208 LLEACXLAGNEAFKNVLVIHSLSKRSSAPGLRSGFI 243
>pdb|3GET|A Chain A, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Np_281508.1) From Campylobacter Jejuni
At 2.01 A Resolution
pdb|3GET|B Chain B, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Np_281508.1) From Campylobacter Jejuni
At 2.01 A Resolution
Length = 365
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 100/233 (42%), Gaps = 27/233 (11%)
Query: 112 DRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNF 171
+ I++G G+ E + N +AFL +A ++ + + G + I++N
Sbjct: 83 ENIIIGAGSDQVIEFAIHSKLNSKNAFLQAGVTFAXYEI-YAKQCGAKCYKTQ-SITHNL 140
Query: 172 KITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDE 231
+ + YE ++ IK + + P+NPLG LD + +N+ + +V D
Sbjct: 141 ----DEFKKLYETHKDE---IKLIFLCLPNNPLGECLDASEATEFIKGVNEDCL-VVIDA 192
Query: 232 IYA--ATVFSSPKFTSVAEVIQEMDCNRDLIHIIY--SLSKDMGLPGFRVGIVYSFNDTV 287
Y A+ S K E+I+E D +++Y + S GL G R+G + N +
Sbjct: 193 AYNEFASFKDSKKHLEPCELIKEFD------NVLYLGTFSXLYGLGGLRIGYGIA-NANI 245
Query: 288 VNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFL------VETSKRLAKRHH 334
++ K+ + VS+ + DDEF + L E K AK+H+
Sbjct: 246 ISAFYKLRAPFNVSNLALKAAVAAXDDDEFTEKTLENNFSQXELYKEFAKKHN 298
>pdb|1C7N|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|B Chain B, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|C Chain C, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|D Chain D, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|E Chain E, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|F Chain F, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|G Chain G, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|H Chain H, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7O|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|B Chain B, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|C Chain C, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|D Chain D, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|E Chain E, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|F Chain F, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|G Chain G, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|H Chain H, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
Length = 399
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 85/218 (38%), Gaps = 31/218 (14%)
Query: 34 TQNP---GGVIQLGLAENQLCFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPE 90
+QNP V+ L +A+ + KNP I EG++ + D + E
Sbjct: 24 SQNPEVGNEVVPLSVADMEF----------KNPPELI---EGLKKYLDETVLGYTGPTEE 70
Query: 91 FRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDR 150
+++ V K+M K R + D I+ G A + PGD ++ +P Y F
Sbjct: 71 YKKTVKKWM-KDRH-QWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFM 128
Query: 151 DLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDR 210
+ + I + + I + LE + N K L+ +P NP+G +
Sbjct: 129 AIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDK-----NNKALLFCSPHNPVGRVWKK 183
Query: 211 DTLKSLVSFINDKNIHLVCDEI--------YAATVFSS 240
D L+ + + ++ L DEI Y TVF S
Sbjct: 184 DELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQS 221
>pdb|3RQ1|A Chain A, Crystal Structure Of Aminotransferase Class I And Ii From
Veillonella Parvula
pdb|3RQ1|B Chain B, Crystal Structure Of Aminotransferase Class I And Ii From
Veillonella Parvula
pdb|3RQ1|C Chain C, Crystal Structure Of Aminotransferase Class I And Ii From
Veillonella Parvula
pdb|3RQ1|D Chain D, Crystal Structure Of Aminotransferase Class I And Ii From
Veillonella Parvula
Length = 418
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 111/297 (37%), Gaps = 45/297 (15%)
Query: 87 GLPEFRQAVAK-FMGKGRGGRVTFDPD---RIVMGGGATGANELIMFCLANPGDAFLVPS 142
G+P+F A K G F P+ R + G TG ++ PGD L
Sbjct: 81 GIPDFLCAAEKECFG-------NFRPEGHIRSIATAGGTGGIHHLIHNYTEPGDEVLTAD 133
Query: 143 PYYAAFDRDLSWRTGVQIVPVHC-DISNNFKITREALEAAYERAQEASINIKGLIITNPS 201
Y+ A+ R + TG +V D NNF EA + N+ + T +
Sbjct: 134 WYWGAY-RVICSDTGRTLVTYSLFDEHNNF--NHEAFQNRVNELAAKQTNVVVIFNTPGN 190
Query: 202 NPLGTTLDRDTLKSLVSFIND------KNIHLVCDEIYAATVFSSPK------FTSVAEV 249
NP G +++ S+++F+ D N+ + D Y +S K F + +
Sbjct: 191 NPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLD--YSGEKDEVRAFFNKFSHL 248
Query: 250 IQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDT--------VVNCGRKMSSFGLVS 301
+E+ L + YSLSK G RVG +D VN +++ +
Sbjct: 249 PKEI-----LTCVCYSLSKGFTXYGQRVGAXIGISDDEEIADEFFEVNKSTSRATWSNIC 303
Query: 302 SQTQYLLASMLSDDEFVDNFLVETS---KRLAKRHHNFTKGLEQVGINCLKSNAGLF 355
A++++D + E + + + R F + QVG+ L G F
Sbjct: 304 RPAXRTXANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQVGLPXLPYRGGFF 360
>pdb|3P1T|A Chain A, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|B Chain B, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|C Chain C, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|D Chain D, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
Length = 337
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 65/158 (41%), Gaps = 19/158 (12%)
Query: 195 LIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMD 254
+++ NPSNP G L L L + L+ DE Y +SS + +A E+
Sbjct: 139 VVLANPSNPTGQALSAGELDQL----RQRAGKLLIDETY--VDYSSFRARGLAYGENEL- 191
Query: 255 CNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSD 314
+ S SK GL G R+G ++ ++ + RK F V + + L + L +
Sbjct: 192 -------VFRSFSKSYGLAGLRLGALFGPSELIAAXKRKQ-WFCNVGTLDLHALEAALDN 243
Query: 315 DEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNA 352
D + + +T LA+R L +G S A
Sbjct: 244 DRAREAHIAKT---LAQR-RRVADALRGLGYRVASSEA 277
>pdb|3FKD|A Chain A, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
pdb|3FKD|B Chain B, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
pdb|3FKD|C Chain C, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
pdb|3FKD|D Chain D, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
Length = 350
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 13/91 (14%)
Query: 197 ITNPSNPLGTTLDRDTLKSLVSFINDK-NIHLVCDEIYAATVFSSPKFTSVAEVIQEMDC 255
+ NP+NP G L R ++ +ND + V D+ Y + FT+ EVI+ D
Sbjct: 135 LCNPNNPDGRLLQR---TEILRLLNDHPDTTFVLDQSYVS-------FTT-EEVIRPADI 183
Query: 256 N-RDLIHIIYSLSKDMGLPGFRVGIVYSFND 285
R + +YS S G+PG R+G + + D
Sbjct: 184 KGRKNLVXVYSFSHAYGIPGLRIGYIVANKD 214
>pdb|4GE7|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE7|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 81/391 (20%), Positives = 146/391 (37%), Gaps = 67/391 (17%)
Query: 72 GVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDP------DRIVMGGGATGANE 125
G E+ K + G+PE + + K P D V G G +
Sbjct: 64 GEEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLXK 123
Query: 126 LIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYER- 184
+ + NPGD L+ P Y+ + L G I+ V D S I ++L R
Sbjct: 124 VFEMII-NPGDNVLLDEPAYSGTLQSLH-PLGCNIINVASDESG---IVPDSLRDILSRW 178
Query: 185 ----AQEASINIKGLIITNPS--NPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVF 238
A+ N + T P+ NP G +L + K + + ++ D+ Y F
Sbjct: 179 KPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQF 238
Query: 239 SS---PKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMS 295
+S P F S MD + +I S SK + G R+G + + +
Sbjct: 239 NSGRVPTFLS-------MDVDGRVIR-ADSFSKIIS-SGLRIGFLTGPKPLIERVILHIQ 289
Query: 296 SFGL-VSSQTQYLLASMLSD----------DEFVDNFLVETSKRLAKRHHNFTKGLEQVG 344
L S+ Q +++ +L + D +D + + LA T GL +
Sbjct: 290 VSTLHPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLT-GLAEWH 348
Query: 345 INCLKSNAGLFFWM------DLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSF--QCT 396
+ AG+F W+ D++ L++EK ++ + + PG++F +
Sbjct: 349 VPA----AGMFLWIKVKGINDVKELIEEKAVKMGVLML------------PGNAFYVDSS 392
Query: 397 EPG-WFRVCFANMDDDTLQVALNRIAAFVQQ 426
P + R F++ + + VA +A +++
Sbjct: 393 APSPYLRASFSSASPEQMDVAFQVLAQLIKE 423
>pdb|4FL0|A Chain A, Crystal Structure Of Ald1 From Arabidopsis Thaliana
pdb|4FL0|B Chain B, Crystal Structure Of Ald1 From Arabidopsis Thaliana
Length = 456
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 91/237 (38%), Gaps = 35/237 (14%)
Query: 195 LIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVF-SSPKFTSVAEVIQEM 253
+ +P+NP G R L LV F ++ D YAA + SP+ I E+
Sbjct: 216 IFFCSPNNPTGYVASRKQLHQLVDFAKTNGSIIIFDSAYAAFIEDGSPR------SIYEI 269
Query: 254 DCNRDLIHIIYSLSKDMGLPGFRVG-------IVYSFNDTVVNCGRKM--SSFGLVSSQT 304
R++ + S SK G G R+G ++YS ++N ++ +SF S+
Sbjct: 270 PGAREVAIEVSSFSKFAGFTGVRLGWSIIPDELLYSNGFPIINDFHRIVTTSFNGASNIA 329
Query: 305 QY-----LLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMD 359
Q L + L + V+N+ E K L L +G+ + W+
Sbjct: 330 QAGGLACLSSGGLKEIRSVNNYYKENRKILMDT-------LVSLGLKVYGGVNAPYLWV- 381
Query: 360 LRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVA 416
H K+ + ++ I+ + + PGS F + R+ D ++ +
Sbjct: 382 --HFKGSKSWD----VFNEILENTHIITVPGSGFGPGGEEYLRISGFGRRDHIVEAS 432
>pdb|3IF2|A Chain A, Crystal Structure Of Putative Amino-Acid Aminotransferase
(Yp_265399.1) From Psychrobacter Arcticum 273-4 At 2.50
A Resolution
pdb|3IF2|B Chain B, Crystal Structure Of Putative Amino-Acid Aminotransferase
(Yp_265399.1) From Psychrobacter Arcticum 273-4 At 2.50
A Resolution
Length = 444
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Query: 192 IKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQ 251
I + + P+NP G L + L +I L+ D Y F ++
Sbjct: 207 IGAICCSRPTNPTGNVLTDEEXAHLAEIAKRYDIPLIIDNAYGX------PFPNIIYSDA 260
Query: 252 EMDCNRDLIHIIYSLSKDMGLPGFRVGIV 280
++ + + I + +SLSK +GLPG R GI+
Sbjct: 261 HLNWDNNTI-LCFSLSK-IGLPGXRTGII 287
>pdb|3QGU|A Chain A, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
pdb|3QGU|B Chain B, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
Length = 449
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Query: 195 LIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMD 254
+ +P+NP G R L LV+F LV D YA + S+P + I E+
Sbjct: 213 IFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYI-SNP---DCPKTIYEIP 268
Query: 255 CNRDLIHIIYSLSKDMGLPGFRVG 278
++ S SK G G R+G
Sbjct: 269 GADEVAIETCSFSKYAGFTGVRLG 292
>pdb|3RCH|A Chain A, Crystal Structure Of Human Aromatic L-Amino Acid
Decarboxylase (Aadc) In The Open Conformation With Llp
And Plp Bound To Chain-A And Chain- B Respectively
Length = 480
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Query: 157 GVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTT--LDRDTLK 214
GV++ + D NF + AL+ A ER + A GLI LGTT D L
Sbjct: 203 GVKLKAIPSD--GNFAMRASALQEALERDKAA-----GLIPFFMVATLGTTTCCSFDNLL 255
Query: 215 SLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMD 254
+ N ++I L D YA + F P+F + ++ D
Sbjct: 256 EVGPICNKEDIWLHVDAAYAGSAFICPEFRHLLNGVEFAD 295
>pdb|3RBF|A Chain A, Crystal Structure Of Human Aromatic L-Amino Acid
Decarboxylase (Aadc) In The Apo Form
pdb|3RBF|B Chain B, Crystal Structure Of Human Aromatic L-Amino Acid
Decarboxylase (Aadc) In The Apo Form
pdb|3RBL|A Chain A, Crystal Structure Of Human Aromatic L-Amino Acid
Decarboxylase (Aadc) In The Apo Form
pdb|3RBL|B Chain B, Crystal Structure Of Human Aromatic L-Amino Acid
Decarboxylase (Aadc) In The Apo Form
pdb|3RCH|B Chain B, Crystal Structure Of Human Aromatic L-Amino Acid
Decarboxylase (Aadc) In The Open Conformation With Llp
And Plp Bound To Chain-A And Chain- B Respectively
Length = 480
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Query: 157 GVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTT--LDRDTLK 214
GV++ + D NF + AL+ A ER + A GLI LGTT D L
Sbjct: 203 GVKLKAIPSD--GNFAMRASALQEALERDKAA-----GLIPFFMVATLGTTTCCSFDNLL 255
Query: 215 SLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMD 254
+ N ++I L D YA + F P+F + ++ D
Sbjct: 256 EVGPICNKEDIWLHVDAAYAGSAFICPEFRHLLNGVEFAD 295
>pdb|4E1O|A Chain A, Human Histidine Decarboxylase Complex With Histidine
Methyl Ester (Hme)
pdb|4E1O|B Chain B, Human Histidine Decarboxylase Complex With Histidine
Methyl Ester (Hme)
pdb|4E1O|C Chain C, Human Histidine Decarboxylase Complex With Histidine
Methyl Ester (Hme)
pdb|4E1O|D Chain D, Human Histidine Decarboxylase Complex With Histidine
Methyl Ester (Hme)
pdb|4E1O|E Chain E, Human Histidine Decarboxylase Complex With Histidine
Methyl Ester (Hme)
pdb|4E1O|F Chain F, Human Histidine Decarboxylase Complex With Histidine
Methyl Ester (Hme)
Length = 481
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 7/90 (7%)
Query: 167 ISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTT--LDRDTLKSLVSFINDKN 224
+ +NF + EAL+ A E ++ +GL+ LGTT D L L +
Sbjct: 217 VDDNFSLRGEALQKAIEEDKQ-----RGLVPVFVCATLGTTGVCAFDXLSELGPICAREG 271
Query: 225 IHLVCDEIYAATVFSSPKFTSVAEVIQEMD 254
+ L D YA T F P+F + I+ D
Sbjct: 272 LWLHIDAAYAGTAFLCPEFRGFLKGIEYAD 301
>pdb|1FMT|A Chain A, Methionyl-Trnafmet Formyltransferase From Escherichia Coli
pdb|1FMT|B Chain B, Methionyl-Trnafmet Formyltransferase From Escherichia Coli
pdb|2FMT|A Chain A, Methionyl-Trnafmet Formyltransferase Complexed With
Formyl- Methionyl-Trnafmet
pdb|2FMT|B Chain B, Methionyl-Trnafmet Formyltransferase Complexed With
Formyl- Methionyl-Trnafmet
Length = 314
Score = 32.0 bits (71), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 63/153 (41%), Gaps = 22/153 (14%)
Query: 250 IQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLA 309
I +MD D ++Y LS P + D + G + GL+++ Q LA
Sbjct: 138 IMQMDVGLDTGDMLYKLS----CPITAEDTSGTLYDKLAELGPQ----GLITTLKQ--LA 187
Query: 310 SMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGIN-CLKS-NAGLFFWMDLRHLLKEK 367
+ E D LV +++L+K L + C+++ N W+++
Sbjct: 188 DGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEI------- 240
Query: 368 TLEGE-IALWRTIVNDVKLNVSPGSSFQCTEPG 399
EG+ + +W+ V D N +PG+ + + G
Sbjct: 241 --EGQPVKVWKASVIDTATNAAPGTILEANKQG 271
>pdb|2IKQ|A Chain A, Crystal Structure Of Mouse Sts-1 Pgm Domain In Complex
With Phosphate
pdb|2IKQ|B Chain B, Crystal Structure Of Mouse Sts-1 Pgm Domain In Complex
With Phosphate
pdb|2IKQ|M Chain M, Crystal Structure Of Mouse Sts-1 Pgm Domain In Complex
With Phosphate
Length = 270
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 294 MSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAG 353
++ FG + Q + + ++L + +D+ S R + HN KGL+Q ++ G
Sbjct: 62 ITVFGCM--QARLVGEALLESNTVIDHVYCSPSLRCVQTAHNILKGLQQDNHLKIRVEPG 119
Query: 354 LFFW 357
LF W
Sbjct: 120 LFEW 123
>pdb|2H0Q|A Chain A, Crystal Structure Of The Pgm Domain Of The Suppressor Of
T-Cell Receptor (Sts-1)
pdb|2H0Q|B Chain B, Crystal Structure Of The Pgm Domain Of The Suppressor Of
T-Cell Receptor (Sts-1)
pdb|2H0Q|C Chain C, Crystal Structure Of The Pgm Domain Of The Suppressor Of
T-Cell Receptor (Sts-1)
Length = 261
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 294 MSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAG 353
++ FG + Q + + ++L + +D+ S R + HN KGL+Q ++ G
Sbjct: 58 ITVFGCM--QARLVGEALLESNTVIDHVYCSPSLRCVQTAHNILKGLQQDNHLKIRVEPG 115
Query: 354 LFFW 357
LF W
Sbjct: 116 LFEW 119
>pdb|3MBK|A Chain A, The 1.35 A Structure Of The Phosphatase Domain Of The
Suppressor Of T Cell Receptor Signalling Protein In
Complex With Sulphate
pdb|3MBK|B Chain B, The 1.35 A Structure Of The Phosphatase Domain Of The
Suppressor Of T Cell Receptor Signalling Protein In
Complex With Sulphate
Length = 264
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 294 MSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAG 353
++ FG + Q + + ++L + +D+ S R + HN KGL+Q ++ G
Sbjct: 58 ITVFGCM--QARLVGEALLESNTVIDHVYCSPSLRCVQTAHNILKGLQQDNHLKIRVEPG 115
Query: 354 LFFW 357
LF W
Sbjct: 116 LFEW 119
>pdb|3CQ4|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum
pdb|3CQ4|B Chain B, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum
Length = 376
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 116/283 (40%), Gaps = 49/283 (17%)
Query: 90 EFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCL---ANPGDAFLVPSPYYA 146
E R +A ++ K G VT D A G+NE++ L PG L P Y+
Sbjct: 70 ELRDELAAYITKQTGVAVTRD-----NLWAANGSNEILQQLLQAFGGPGRTALGFQPSYS 124
Query: 147 AFDRDLSWRTGVQIVPVHCDISNNFKITRE-ALEAAYERAQEASINIKGLIITNPSNPLG 205
L+ T + + V +F+I + ALE RA++ I + +T P+NP G
Sbjct: 125 -MHPILAKGTHTEFIAVSR--GADFRIDMDVALEEI--RAKQPDI----VFVTTPNNPTG 175
Query: 206 TTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFS-SPKFTSVAEVIQEMDCNRDLIHIIY 264
D +L + IN ++ DE YA FS SP T++ E + +
Sbjct: 176 ---DVTSLDDVERIINVAPGIVIVDEAYAE--FSPSPSATTLLEKYPTK------LVVSR 224
Query: 265 SLSKDMGLPGFRVGIVY---SFNDTV--VNCGRKMSSFGLVSSQTQYLLASMLSDDEF-- 317
++SK G R+G +F D V V +S+ SQ ++A S D
Sbjct: 225 TMSKAFDFAGGRLGYFVANPAFIDAVMLVRLPYHLSAL----SQAAAIVALRHSADTLGT 280
Query: 318 VDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDL 360
V+ VE R+A R LE++G + S + F+ D
Sbjct: 281 VEKLSVE-RVRVAAR-------LEELGYAVVPSESNFVFFGDF 315
>pdb|3CQ5|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
pdb|3CQ5|B Chain B, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
pdb|3CQ5|C Chain C, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
Length = 369
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 116/283 (40%), Gaps = 49/283 (17%)
Query: 90 EFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCL---ANPGDAFLVPSPYYA 146
E R +A ++ K G VT D A G+NE++ L PG L P Y+
Sbjct: 73 ELRDELAAYITKQTGVAVTRD-----NLWAANGSNEILQQLLQAFGGPGRTALGFQPSYS 127
Query: 147 AFDRDLSWRTGVQIVPVHCDISNNFKITRE-ALEAAYERAQEASINIKGLIITNPSNPLG 205
L+ T + + V +F+I + ALE RA++ I + +T P+NP G
Sbjct: 128 -MHPILAKGTHTEFIAVSR--GADFRIDMDVALEEI--RAKQPDI----VFVTTPNNPTG 178
Query: 206 TTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFS-SPKFTSVAEVIQEMDCNRDLIHIIY 264
D +L + IN ++ DE YA FS SP T++ E + +
Sbjct: 179 ---DVTSLDDVERIINVAPGIVIVDEAYAE--FSPSPSATTLLEKYPTK------LVVSR 227
Query: 265 SLSKDMGLPGFRVGIVY---SFNDTV--VNCGRKMSSFGLVSSQTQYLLASMLSDDEF-- 317
++SK G R+G +F D V V +S+ SQ ++A S D
Sbjct: 228 TMSKAFDFAGGRLGYFVANPAFIDAVMLVRLPYHLSAL----SQAAAIVALRHSADTLGT 283
Query: 318 VDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDL 360
V+ VE R+A R LE++G + S + F+ D
Sbjct: 284 VEKLSVE-RVRVAAR-------LEELGYAVVPSESNFVFFGDF 318
>pdb|1JS3|A Chain A, Crystal Structure Of Dopa Decarboxylase In Complex With
The Inhibitor Carbidopa
pdb|1JS3|B Chain B, Crystal Structure Of Dopa Decarboxylase In Complex With
The Inhibitor Carbidopa
pdb|1JS6|A Chain A, Crystal Structure Of Dopa Decarboxylase
pdb|1JS6|B Chain B, Crystal Structure Of Dopa Decarboxylase
Length = 486
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Query: 157 GVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTT--LDRDTLK 214
GV++ + D F + AL+ A ER + A GLI LGTT D L
Sbjct: 203 GVKLKAIPSD--GKFAMRASALQEALERDKAA-----GLIPFFVVATLGTTSCCSFDNLL 255
Query: 215 SLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMD 254
+ ++++I L D YA + F P+F + ++ D
Sbjct: 256 EVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFAD 295
>pdb|2Z1Z|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|2Z1Z|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|3EI5|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI5|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI6|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI6|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI7|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
pdb|3EI7|B Chain B, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
Length = 432
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 7/85 (8%)
Query: 195 LIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVF-SSPKFTSVAEVIQEM 253
+ +P+NP G R+ L LV F +V D YA + +P+ I E+
Sbjct: 202 IFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPR------SIFEI 255
Query: 254 DCNRDLIHIIYSLSKDMGLPGFRVG 278
++ S SK G G R+G
Sbjct: 256 PGAEEVAMETASFSKYAGFTGVRLG 280
>pdb|2Z20|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
pdb|2Z20|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
Length = 432
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 7/85 (8%)
Query: 195 LIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVF-SSPKFTSVAEVIQEM 253
+ +P+NP G R+ L LV F +V D YA +P+ I E+
Sbjct: 202 IFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAXYXSDDNPR------SIFEI 255
Query: 254 DCNRDLIHIIYSLSKDMGLPGFRVG 278
++ S SK G G R+G
Sbjct: 256 PGAEEVAXETASFSKYAGFTGVRLG 280
>pdb|4EMY|A Chain A, Crystal Structure Of Aminotransferase From Anaerococcus
Prevotii Dsm 20548.
pdb|4EMY|B Chain B, Crystal Structure Of Aminotransferase From Anaerococcus
Prevotii Dsm 20548.
pdb|4EMY|C Chain C, Crystal Structure Of Aminotransferase From Anaerococcus
Prevotii Dsm 20548.
pdb|4EMY|D Chain D, Crystal Structure Of Aminotransferase From Anaerococcus
Prevotii Dsm 20548
Length = 413
Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 49/256 (19%), Positives = 92/256 (35%), Gaps = 19/256 (7%)
Query: 119 GATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREAL 178
G TGA +F + GD + Y+A + R + G +++F +
Sbjct: 109 GGTGAIRSAIFSYLDEGDPLICHDYYWAPY-RKICEEFGRNFKTFEF-FTDDFAFNIDVY 166
Query: 179 EAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFI------NDKNIHLVCDEI 232
+ A + S I LI + +NP G +L + +++F+ DK I L+ D
Sbjct: 167 KEAIDEGIRDSDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVA 226
Query: 233 YAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVG----------IVYS 282
Y + E + N + + +S SK G R G I+
Sbjct: 227 YLEFAGDGDQQRKFFEKFSNLPRNL-FVVVAFSXSKSHTAYGLRSGAAVGISSSKEIIEE 285
Query: 283 FNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQ 342
F ++ + R S G ++Q + + + + LV+ L R F ++
Sbjct: 286 FEASLAHSARCNWSNGTHAAQNILIELERAENKKIYEQELVDLRNXLKSRADVFVTAAKE 345
Query: 343 VGINCLKSNAGLFFWM 358
+ + G F ++
Sbjct: 346 NKLTXIPYFGGFFTFI 361
>pdb|1EA9|C Chain C, Cyclomaltodextrinase
pdb|1EA9|D Chain D, Cyclomaltodextrinase
Length = 583
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 209 DRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHI 262
D+DTLK LV +++ I ++ D ++ + + P F V + E +D HI
Sbjct: 217 DKDTLKKLVDLCHERGIRVLLDAVFNHSGRTFPPFVDVLKN-GEKSKYKDWFHI 269
>pdb|3CQ6|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
pdb|3CQ6|C Chain C, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
pdb|3CQ6|E Chain E, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
Length = 369
Score = 28.9 bits (63), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 72/164 (43%), Gaps = 24/164 (14%)
Query: 90 EFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCL---ANPGDAFLVPSPYYA 146
E R +A ++ K G VT D A G+NE++ L PG L P Y+
Sbjct: 73 ELRDELAAYITKQTGVAVTRD-----NLWAANGSNEILQQLLQAFGGPGRTALGFQPSYS 127
Query: 147 AFDRDLSWRTGVQIVPVHCDISNNFKITRE-ALEAAYERAQEASINIKGLIITNPSNPLG 205
L+ T + + V +F+I + ALE RA++ I + +T P+NP G
Sbjct: 128 -MHPILAKGTHTEFIAVSR--GADFRIDMDVALEEI--RAKQPDI----VFVTTPNNPTG 178
Query: 206 TTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFS-SPKFTSVAE 248
D +L + IN ++ DE YA FS SP T++ E
Sbjct: 179 ---DVTSLDDVERIINVAPGIVIVDEAYAE--FSPSPSATTLLE 217
>pdb|3EIA|A Chain A, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
pdb|3EIA|B Chain B, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
Length = 432
Score = 28.5 bits (62), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 7/85 (8%)
Query: 195 LIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVF-SSPKFTSVAEVIQEM 253
+ +P+NP G R+ L LV F +V D YA + +P+ I E+
Sbjct: 202 IFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPR------SIFEI 255
Query: 254 DCNRDLIHIIYSLSKDMGLPGFRVG 278
++ S S+ G G R+G
Sbjct: 256 PGAEEVAMETASFSQYAGFTGVRLG 280
>pdb|3FUO|A Chain A, The Crystal Structure Of Receptor Binding Domain Of
Botulinum Neurotoxin Serotype A
Length = 426
Score = 28.5 bits (62), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 297 FGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAG 353
F L SS+ + +L + + + +NF R+ K ++ + E INC+++N+G
Sbjct: 47 FNLESSKIEVILKNAIVYNSMYENFSTSFWIRIPKYFNSISLNNEYTIINCMENNSG 103
>pdb|2VDC|G Chain G, The 9.5 A Resolution Structure Of Glutamate Synthase From
Cryo-Electron Microscopy And Its Oligomerization
Behavior In Solution: Functional Implications.
pdb|2VDC|H Chain H, The 9.5 A Resolution Structure Of Glutamate Synthase From
Cryo-Electron Microscopy And Its Oligomerization
Behavior In Solution: Functional Implications.
pdb|2VDC|I Chain I, The 9.5 A Resolution Structure Of Glutamate Synthase From
Cryo-Electron Microscopy And Its Oligomerization
Behavior In Solution: Functional Implications.
pdb|2VDC|J Chain J, The 9.5 A Resolution Structure Of Glutamate Synthase From
Cryo-Electron Microscopy And Its Oligomerization
Behavior In Solution: Functional Implications.
pdb|2VDC|K Chain K, The 9.5 A Resolution Structure Of Glutamate Synthase From
Cryo-Electron Microscopy And Its Oligomerization
Behavior In Solution: Functional Implications.
pdb|2VDC|L Chain L, The 9.5 A Resolution Structure Of Glutamate Synthase From
Cryo-Electron Microscopy And Its Oligomerization
Behavior In Solution: Functional Implications
Length = 456
Score = 28.5 bits (62), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
Query: 157 GVQIVPVHCDISNN----FKITREA-LEAAYERAQ 186
GV VHC +SNN K+T E LE AYE +Q
Sbjct: 26 GVPFCQVHCPVSNNIPDWLKLTSEGRLEEAYEVSQ 60
>pdb|3V0C|A Chain A, 4.3 Angstrom Crystal Structure Of An Inactive BontA
(E224qR363AY366F)
Length = 1312
Score = 28.5 bits (62), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 297 FGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAG 353
F L SS+ + +L + + + +NF R+ K ++ + E INC+++N+G
Sbjct: 917 FNLESSKIEVILKNAIVYNSMYENFSTSFWIRIPKYFNSISLNNEYTIINCMENNSG 973
>pdb|2VU9|A Chain A, Crystal Structure Of Botulinum Neurotoxin Serotype A
Binding Domain In Complex With Gt1b
pdb|2VUA|A Chain A, Crystal Structure Of The Botulinum Neurotoxin Serotype A
Binding Domain
Length = 444
Score = 28.5 bits (62), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 297 FGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAG 353
F L SS+ + +L + + + +NF R+ K ++ + E INC+++N+G
Sbjct: 64 FNLESSKIEVILKNAIVYNSMYENFSTSFWIRIPKYFNSISLNNEYTIINCMENNSG 120
>pdb|3EI8|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI8|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI9|A Chain A, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EI9|B Chain B, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EIB|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
pdb|3EIB|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
Length = 432
Score = 28.5 bits (62), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 195 LIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYA 234
+ +P+NP G R+ L LV F +V D YA
Sbjct: 202 IFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYA 241
>pdb|3V0A|A Chain A, 2.7 Angstrom Crystal Structure Of BontAI IN COMPLEX WITH
NTNHA
pdb|3V0B|A Chain A, 3.9 Angstrom Crystal Structure Of BontAI IN COMPLEX WITH
NTNHA
Length = 1296
Score = 28.5 bits (62), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 297 FGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAG 353
F L SS+ + +L + + + +NF R+ K ++ + E INC+++N+G
Sbjct: 917 FNLESSKIEVILKNAIVYNSMYENFSTSFWIRIPKYFNSISLNNEYTIINCMENNSG 973
>pdb|3BTA|A Chain A, Crystal Structure Of Botulinum Neurotoxin Serotype A
pdb|2NYY|A Chain A, Crystal Structure Of Botulinum Neurotoxin Type A Complexed
With Monoclonal Antibody Cr1
pdb|2NZ9|A Chain A, Crystal Structure Of Botulinum Neurotoxin Type A Complexed
With Monoclonal Antibody Ar2
pdb|2NZ9|B Chain B, Crystal Structure Of Botulinum Neurotoxin Type A Complexed
With Monoclonal Antibody Ar2
Length = 1295
Score = 28.5 bits (62), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 297 FGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAG 353
F L SS+ + +L + + + +NF R+ K ++ + E INC+++N+G
Sbjct: 916 FNLESSKIEVILKNAIVYNSMYENFSTSFWIRIPKYFNSISLNNEYTIINCMENNSG 972
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,356,709
Number of Sequences: 62578
Number of extensions: 604537
Number of successful extensions: 1613
Number of sequences better than 100.0: 98
Number of HSP's better than 100.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 1480
Number of HSP's gapped (non-prelim): 101
length of query: 477
length of database: 14,973,337
effective HSP length: 102
effective length of query: 375
effective length of database: 8,590,381
effective search space: 3221392875
effective search space used: 3221392875
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)