Query 011801
Match_columns 477
No_of_seqs 323 out of 2787
Neff 8.7
Searched_HMMs 46136
Date Fri Mar 29 05:23:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011801.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011801hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0256 1-aminocyclopropane-1- 100.0 2E-106 4E-111 769.3 40.0 425 2-426 37-461 (471)
2 PLN02376 1-aminocyclopropane-1 100.0 7.5E-94 1.6E-98 747.0 48.6 469 1-475 9-496 (496)
3 PLN02607 1-aminocyclopropane-1 100.0 2.1E-78 4.6E-83 624.4 45.7 428 2-429 11-440 (447)
4 PLN02450 1-aminocyclopropane-1 100.0 2.4E-71 5.3E-76 576.0 46.6 450 1-452 1-467 (468)
5 COG0436 Aspartate/tyrosine/aro 100.0 2.3E-57 5E-62 459.3 38.7 355 38-426 28-391 (393)
6 PRK07366 succinyldiaminopimela 100.0 1.9E-52 4.1E-57 427.1 36.3 354 37-424 29-388 (388)
7 PRK08636 aspartate aminotransf 100.0 1.8E-51 3.9E-56 421.6 40.8 365 37-428 32-402 (403)
8 PRK07681 aspartate aminotransf 100.0 1.1E-51 2.4E-56 422.8 38.1 350 37-422 31-384 (399)
9 PRK06207 aspartate aminotransf 100.0 2.6E-51 5.7E-56 420.2 38.0 386 5-428 9-404 (405)
10 PRK06855 aminotransferase; Val 100.0 7E-51 1.5E-55 420.2 40.8 387 12-426 9-429 (433)
11 PTZ00377 alanine aminotransfer 100.0 1E-50 2.3E-55 424.3 42.4 345 79-427 108-476 (481)
12 PLN02187 rooty/superroot1 100.0 8.3E-51 1.8E-55 421.6 39.8 362 37-429 65-441 (462)
13 PRK09147 succinyldiaminopimela 100.0 8.2E-51 1.8E-55 416.0 38.9 351 38-425 29-395 (396)
14 PLN00175 aminotransferase fami 100.0 1.3E-50 2.9E-55 415.6 37.6 353 38-426 54-413 (413)
15 PRK09148 aminotransferase; Val 100.0 2.4E-50 5.3E-55 413.2 39.4 361 37-429 29-393 (405)
16 PRK13355 bifunctional HTH-doma 100.0 1.8E-50 3.9E-55 425.9 39.4 359 38-427 146-515 (517)
17 PLN02656 tyrosine transaminase 100.0 2.7E-50 5.9E-55 413.4 39.4 376 23-429 16-406 (409)
18 PRK07682 hypothetical protein; 100.0 7.7E-51 1.7E-55 413.8 34.4 354 38-427 20-377 (378)
19 PLN00143 tyrosine/nicotianamin 100.0 2.9E-50 6.4E-55 412.9 39.0 362 37-429 31-407 (409)
20 PRK08068 transaminase; Reviewe 100.0 1.4E-50 3.1E-55 413.2 36.5 352 37-423 31-386 (389)
21 TIGR03538 DapC_gpp succinyldia 100.0 3.4E-50 7.4E-55 411.0 38.7 352 38-424 28-393 (393)
22 TIGR03540 DapC_direct LL-diami 100.0 2.2E-50 4.7E-55 411.2 36.9 350 38-422 29-382 (383)
23 PLN00145 tyrosine/nicotianamin 100.0 5.5E-50 1.2E-54 412.7 39.5 362 37-429 51-427 (430)
24 PLN02231 alanine transaminase 100.0 1.6E-49 3.4E-54 416.5 42.7 343 79-426 161-527 (534)
25 PRK06348 aspartate aminotransf 100.0 4.5E-50 9.7E-55 408.8 37.4 347 39-423 30-382 (384)
26 PTZ00433 tyrosine aminotransfe 100.0 7.6E-50 1.6E-54 410.6 39.2 365 35-428 30-410 (412)
27 PRK09276 LL-diaminopimelate am 100.0 4.2E-50 9.2E-55 409.3 36.4 350 38-422 31-384 (385)
28 PRK05942 aspartate aminotransf 100.0 1.2E-49 2.5E-54 407.2 38.2 351 38-424 35-390 (394)
29 PRK06290 aspartate aminotransf 100.0 1.1E-49 2.5E-54 407.9 36.8 355 37-426 43-405 (410)
30 PRK08361 aspartate aminotransf 100.0 9.2E-50 2E-54 407.6 35.5 353 38-426 33-390 (391)
31 PRK07309 aromatic amino acid a 100.0 5E-49 1.1E-53 402.0 39.9 358 38-428 30-390 (391)
32 TIGR03537 DapC succinyldiamino 100.0 2.7E-49 5.8E-54 398.2 36.5 341 40-422 2-349 (350)
33 PRK07590 L,L-diaminopimelate a 100.0 1.4E-49 3.1E-54 408.3 35.1 351 37-423 33-408 (409)
34 PRK06107 aspartate aminotransf 100.0 4.1E-49 8.9E-54 404.0 37.2 359 37-426 32-400 (402)
35 PRK08960 hypothetical protein; 100.0 6.4E-49 1.4E-53 400.8 36.9 349 39-425 33-386 (387)
36 PRK12414 putative aminotransfe 100.0 4.7E-49 1E-53 401.2 35.7 348 39-422 30-383 (384)
37 PRK06108 aspartate aminotransf 100.0 8.2E-49 1.8E-53 399.5 36.9 352 38-425 24-381 (382)
38 PRK08912 hypothetical protein; 100.0 1.5E-48 3.3E-53 398.1 37.9 354 39-426 27-386 (387)
39 TIGR01264 tyr_amTase_E tyrosin 100.0 1.9E-48 4.1E-53 399.2 38.6 357 38-426 31-399 (401)
40 PRK05839 hypothetical protein; 100.0 1.1E-48 2.5E-53 396.8 36.6 341 39-425 25-373 (374)
41 PF00155 Aminotran_1_2: Aminot 100.0 1.9E-49 4E-54 401.4 29.5 358 39-420 2-363 (363)
42 PRK07337 aminotransferase; Val 100.0 2.3E-48 5.1E-53 396.9 36.8 353 38-424 30-387 (388)
43 PRK15481 transcriptional regul 100.0 3.1E-48 6.6E-53 401.1 36.1 341 38-425 85-430 (431)
44 PRK07683 aminotransferase A; V 100.0 5.2E-48 1.1E-52 393.9 37.2 352 38-426 28-383 (387)
45 PRK09082 methionine aminotrans 100.0 1.5E-48 3.2E-53 397.9 33.1 350 38-422 30-385 (386)
46 PRK09265 aminotransferase AlaT 100.0 1.6E-47 3.5E-52 392.6 39.6 359 38-427 33-402 (404)
47 PRK05957 aspartate aminotransf 100.0 1.1E-47 2.4E-52 391.8 37.7 353 39-427 28-386 (389)
48 PRK09275 aspartate aminotransf 100.0 5.3E-48 1.2E-52 399.8 33.4 357 38-429 100-520 (527)
49 TIGR01265 tyr_nico_aTase tyros 100.0 3.9E-47 8.5E-52 389.5 38.8 359 38-427 31-402 (403)
50 PRK08175 aminotransferase; Val 100.0 3.1E-47 6.8E-52 389.3 37.8 357 38-426 29-389 (395)
51 PRK07324 transaminase; Validat 100.0 2.5E-47 5.4E-52 386.8 36.7 344 36-427 24-371 (373)
52 PRK07550 hypothetical protein; 100.0 6E-47 1.3E-51 386.2 37.9 352 38-423 29-384 (386)
53 PRK08363 alanine aminotransfer 100.0 5.6E-47 1.2E-51 387.9 37.7 354 37-426 29-394 (398)
54 TIGR03542 DAPAT_plant LL-diami 100.0 2.5E-47 5.3E-52 390.9 34.6 349 37-423 32-401 (402)
55 PRK07568 aspartate aminotransf 100.0 1E-46 2.3E-51 386.0 38.9 353 38-428 30-394 (397)
56 COG1168 MalY Bifunctional PLP- 100.0 1.5E-46 3.2E-51 359.1 35.5 355 38-426 25-386 (388)
57 PRK07777 aminotransferase; Val 100.0 9.3E-47 2E-51 385.0 36.5 354 39-426 25-386 (387)
58 PRK06358 threonine-phosphate d 100.0 7.7E-47 1.7E-51 380.7 35.2 332 39-424 20-353 (354)
59 COG1167 ARO8 Transcriptional r 100.0 7.3E-47 1.6E-51 390.9 35.6 324 79-427 125-456 (459)
60 KOG0257 Kynurenine aminotransf 100.0 6.7E-48 1.5E-52 371.8 25.5 354 43-421 36-414 (420)
61 COG0079 HisC Histidinol-phosph 100.0 1.4E-46 3.1E-51 374.3 35.8 330 39-426 23-354 (356)
62 PRK05764 aspartate aminotransf 100.0 2.1E-46 4.5E-51 383.3 38.0 358 38-427 31-392 (393)
63 PRK09257 aromatic amino acid a 100.0 1.2E-46 2.5E-51 385.2 35.4 344 39-424 27-396 (396)
64 PLN02672 methionine S-methyltr 100.0 1.9E-46 4.1E-51 409.5 38.5 367 31-425 690-1079(1082)
65 PTZ00376 aspartate aminotransf 100.0 3E-46 6.5E-51 383.0 35.6 318 78-426 64-403 (404)
66 TIGR03801 asp_4_decarbox aspar 100.0 2.1E-46 4.5E-51 387.4 34.1 354 38-429 94-519 (521)
67 PRK01533 histidinol-phosphate 100.0 1.1E-46 2.4E-51 380.6 31.4 326 38-426 29-355 (366)
68 PRK08056 threonine-phosphate d 100.0 3.4E-46 7.3E-51 376.5 33.9 334 37-425 19-354 (356)
69 KOG0259 Tyrosine aminotransfer 100.0 2.3E-45 5E-50 348.0 35.1 331 78-428 95-435 (447)
70 PRK07392 threonine-phosphate d 100.0 1.5E-45 3.2E-50 372.4 36.2 333 37-425 21-358 (360)
71 PRK14809 histidinol-phosphate 100.0 9.9E-46 2.1E-50 373.4 34.7 327 37-425 29-356 (357)
72 PRK02610 histidinol-phosphate 100.0 2.2E-45 4.8E-50 372.9 37.0 340 39-426 29-371 (374)
73 PRK06425 histidinol-phosphate 100.0 1.5E-45 3.3E-50 368.2 34.3 315 39-424 17-331 (332)
74 PRK05166 histidinol-phosphate 100.0 1.9E-45 4E-50 373.1 35.3 334 37-424 35-369 (371)
75 PRK07865 N-succinyldiaminopime 100.0 2.2E-45 4.8E-50 371.8 34.3 335 35-421 24-363 (364)
76 PLN02368 alanine transaminase 100.0 2.9E-45 6.3E-50 373.4 33.9 280 79-361 100-396 (407)
77 PLN03026 histidinol-phosphate 100.0 1E-44 2.2E-49 368.4 36.1 328 37-423 51-379 (380)
78 PRK08637 hypothetical protein; 100.0 2.8E-44 6E-49 366.6 39.3 344 50-427 20-387 (388)
79 PRK09440 avtA valine--pyruvate 100.0 2.3E-45 5E-50 378.2 31.0 373 19-427 12-412 (416)
80 PRK04781 histidinol-phosphate 100.0 1.9E-44 4.2E-49 364.5 35.9 328 38-424 31-361 (364)
81 PRK03158 histidinol-phosphate 100.0 5.7E-45 1.2E-49 368.2 31.8 328 39-423 30-358 (359)
82 TIGR03539 DapC_actino succinyl 100.0 8.4E-45 1.8E-49 366.5 32.4 335 34-420 17-356 (357)
83 PRK06836 aspartate aminotransf 100.0 5.5E-44 1.2E-48 365.2 38.8 346 38-428 33-393 (394)
84 PRK03317 histidinol-phosphate 100.0 6.6E-44 1.4E-48 361.6 35.2 337 39-426 27-364 (368)
85 PRK01688 histidinol-phosphate 100.0 1.4E-44 2.9E-49 363.9 29.4 322 38-421 28-351 (351)
86 PRK04870 histidinol-phosphate 100.0 6.1E-44 1.3E-48 360.2 33.4 329 37-424 25-356 (356)
87 PRK08153 histidinol-phosphate 100.0 6.5E-44 1.4E-48 361.4 33.4 332 39-427 33-366 (369)
88 PRK07908 hypothetical protein; 100.0 1.1E-43 2.3E-48 357.4 34.4 324 38-425 22-346 (349)
89 PRK09105 putative aminotransfe 100.0 2.4E-43 5.2E-48 357.0 33.8 325 38-424 43-368 (370)
90 PLN02397 aspartate transaminas 100.0 4.7E-43 1E-47 360.6 36.5 315 79-425 84-420 (423)
91 PRK02731 histidinol-phosphate 100.0 3.1E-43 6.7E-48 356.6 33.5 334 37-425 31-365 (367)
92 PRK05387 histidinol-phosphate 100.0 4.9E-43 1.1E-47 353.3 33.2 325 38-425 24-352 (353)
93 PRK06225 aspartate aminotransf 100.0 1.2E-42 2.7E-47 353.7 35.8 347 36-428 26-378 (380)
94 PRK04635 histidinol-phosphate 100.0 7.1E-43 1.5E-47 352.0 30.8 320 38-423 31-352 (354)
95 PRK06959 putative threonine-ph 100.0 1.4E-42 3E-47 347.3 31.2 313 37-428 23-335 (339)
96 PRK03321 putative aminotransfe 100.0 4.2E-42 9E-47 346.4 31.7 340 26-425 10-350 (352)
97 PRK08354 putative aminotransfe 100.0 1E-41 2.3E-46 337.4 33.9 309 31-423 1-309 (311)
98 PRK14807 histidinol-phosphate 100.0 1.8E-41 3.9E-46 341.4 35.7 325 40-424 24-350 (351)
99 PRK05664 threonine-phosphate d 100.0 2.3E-41 4.9E-46 337.7 32.7 310 37-426 19-328 (330)
100 TIGR01141 hisC histidinol-phos 100.0 2.5E-41 5.4E-46 339.9 33.0 335 29-421 8-346 (346)
101 PRK00950 histidinol-phosphate 100.0 2.4E-41 5.2E-46 342.0 32.9 326 37-424 33-360 (361)
102 PRK14808 histidinol-phosphate 100.0 5E-41 1.1E-45 335.7 33.8 317 36-423 17-334 (335)
103 PRK03967 histidinol-phosphate 100.0 4.6E-41 1E-45 336.4 33.3 316 39-427 19-335 (337)
104 TIGR01140 L_thr_O3P_dcar L-thr 100.0 1.5E-40 3.2E-45 331.9 31.8 312 38-420 17-329 (330)
105 KOG0634 Aromatic amino acid am 100.0 7E-38 1.5E-42 302.1 31.5 341 78-427 92-467 (472)
106 cd00609 AAT_like Aspartate ami 100.0 1.7E-33 3.6E-38 282.4 36.5 318 79-421 29-349 (350)
107 KOG0258 Alanine aminotransfera 100.0 8.4E-34 1.8E-38 269.8 29.3 339 78-425 105-468 (475)
108 PLN02994 1-aminocyclopropane-1 100.0 2.4E-35 5.2E-40 257.7 10.0 146 2-147 7-153 (153)
109 PRK13238 tnaA tryptophanase/L- 100.0 2E-32 4.4E-37 282.6 32.0 317 80-426 72-433 (460)
110 KOG0633 Histidinol phosphate a 100.0 2.3E-33 4.9E-38 253.7 21.2 305 81-424 65-375 (375)
111 TIGR03576 pyridox_MJ0158 pyrid 100.0 7E-30 1.5E-34 255.3 32.9 282 88-424 56-345 (346)
112 PRK10534 L-threonine aldolase; 100.0 1.6E-30 3.4E-35 260.1 27.7 322 40-425 1-332 (333)
113 COG3977 Alanine-alpha-ketoisov 100.0 2.4E-30 5.1E-35 238.5 23.7 375 20-427 13-412 (417)
114 cd00617 Tnase_like Tryptophana 100.0 1.5E-28 3.3E-33 250.5 33.0 316 81-426 48-408 (431)
115 TIGR02539 SepCysS Sep-tRNA:Cys 100.0 3.8E-28 8.2E-33 246.2 32.9 300 88-426 53-368 (370)
116 PRK06939 2-amino-3-ketobutyrat 100.0 3.5E-28 7.5E-33 248.9 32.8 305 85-426 82-393 (397)
117 TIGR01822 2am3keto_CoA 2-amino 100.0 6.4E-28 1.4E-32 246.8 33.6 297 89-426 86-389 (393)
118 TIGR00858 bioF 8-amino-7-oxono 100.0 3.2E-28 6.9E-33 245.6 30.5 293 88-421 63-360 (360)
119 PLN02721 threonine aldolase 100.0 8.6E-28 1.9E-32 242.1 31.4 335 38-425 5-351 (353)
120 cd06502 TA_like Low-specificit 100.0 9.6E-28 2.1E-32 240.3 29.5 300 81-422 27-337 (338)
121 COG1448 TyrB Aspartate/tyrosin 100.0 8E-28 1.7E-32 230.7 27.1 347 31-423 20-395 (396)
122 PRK10874 cysteine sulfinate de 100.0 1.4E-27 3.1E-32 244.8 30.7 294 88-426 65-398 (401)
123 TIGR03392 FeS_syn_CsdA cystein 100.0 2.4E-27 5.2E-32 242.9 31.2 292 88-426 62-395 (398)
124 TIGR01825 gly_Cac_T_rel pyrido 100.0 3.4E-27 7.4E-32 240.7 32.2 341 37-426 32-381 (385)
125 PLN02822 serine palmitoyltrans 100.0 3.8E-27 8.3E-32 245.4 32.3 313 81-426 149-477 (481)
126 PLN02483 serine palmitoyltrans 100.0 1.2E-26 2.5E-31 242.2 35.3 343 37-426 99-466 (489)
127 cd00378 SHMT Serine-glycine hy 100.0 9E-27 1.9E-31 239.0 31.7 347 40-428 21-387 (402)
128 PF12897 Aminotran_MocR: Alani 100.0 1.4E-26 3E-31 222.6 30.0 321 78-425 60-414 (425)
129 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 1.6E-26 3.4E-31 233.8 31.9 299 88-424 46-360 (361)
130 PRK02627 acetylornithine amino 100.0 1.4E-26 2.9E-31 237.2 29.4 339 34-426 35-394 (396)
131 PRK13392 5-aminolevulinate syn 100.0 3.5E-26 7.6E-31 235.1 30.9 298 87-426 92-397 (410)
132 PRK05958 8-amino-7-oxononanoat 100.0 4.1E-26 8.9E-31 232.5 30.5 337 36-424 37-385 (385)
133 cd06451 AGAT_like Alanine-glyo 100.0 7.1E-26 1.5E-30 228.5 31.1 295 88-425 34-356 (356)
134 PRK02948 cysteine desulfurase; 100.0 1.6E-26 3.4E-31 235.5 26.1 295 88-427 45-375 (381)
135 cd06454 KBL_like KBL_like; thi 100.0 1.2E-25 2.6E-30 226.0 31.1 296 88-423 48-348 (349)
136 PRK07049 methionine gamma-lyas 99.9 3.7E-25 8E-30 227.2 33.6 225 79-343 77-311 (427)
137 TIGR01979 sufS cysteine desulf 99.9 2.7E-25 5.9E-30 228.1 32.3 294 87-426 63-401 (403)
138 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 2.5E-25 5.4E-30 224.2 31.3 295 88-423 33-354 (355)
139 TIGR00707 argD acetylornithine 99.9 1.6E-25 3.4E-30 228.0 28.3 330 35-423 24-378 (379)
140 TIGR02326 transamin_PhnW 2-ami 99.9 9.5E-25 2.1E-29 220.9 31.6 297 88-425 37-361 (363)
141 PRK09295 bifunctional cysteine 99.9 5.2E-25 1.1E-29 226.2 29.9 293 88-425 69-403 (406)
142 PLN02855 Bifunctional selenocy 99.9 3.7E-25 8.1E-30 228.5 28.3 298 88-428 78-420 (424)
143 cd06450 DOPA_deC_like DOPA dec 99.9 3.6E-25 7.7E-30 222.4 26.7 317 50-422 10-344 (345)
144 PRK07179 hypothetical protein; 99.9 1.8E-24 3.9E-29 222.2 32.3 293 87-426 100-398 (407)
145 PRK13479 2-aminoethylphosphona 99.9 2.3E-24 5E-29 218.6 31.5 301 88-427 39-364 (368)
146 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 4E-24 8.7E-29 218.0 31.4 306 87-426 64-381 (387)
147 PRK03244 argD acetylornithine 99.9 8.9E-25 1.9E-29 223.9 26.6 333 34-426 39-394 (398)
148 PRK01278 argD acetylornithine 99.9 2.2E-24 4.8E-29 220.3 29.3 281 111-426 88-388 (389)
149 TIGR01976 am_tr_V_VC1184 cyste 99.9 2.4E-24 5.2E-29 220.6 28.9 290 88-420 62-397 (397)
150 cd06453 SufS_like Cysteine des 99.9 1.8E-24 3.9E-29 219.7 27.0 289 87-420 44-373 (373)
151 PRK08247 cystathionine gamma-s 99.9 2.3E-24 4.9E-29 217.9 26.8 295 79-426 46-364 (366)
152 PRK09064 5-aminolevulinate syn 99.9 1E-23 2.2E-28 216.6 31.2 300 85-426 90-397 (407)
153 TIGR03403 nifS_epsilon cystein 99.9 1.2E-23 2.6E-28 214.4 30.7 302 86-428 39-377 (382)
154 TIGR01821 5aminolev_synth 5-am 99.9 1.1E-23 2.4E-28 216.1 30.3 297 88-426 92-396 (402)
155 PLN02242 methionine gamma-lyas 99.9 1.3E-23 2.9E-28 214.9 30.7 218 87-349 77-303 (418)
156 cd00610 OAT_like Acetyl ornith 99.9 5E-24 1.1E-28 219.4 27.7 346 35-424 33-413 (413)
157 PRK00011 glyA serine hydroxyme 99.9 1.7E-23 3.6E-28 215.7 31.1 285 109-426 86-389 (416)
158 PLN02409 serine--glyoxylate am 99.9 2.1E-23 4.6E-28 213.6 31.1 309 87-428 39-374 (401)
159 TIGR03402 FeS_nifS cysteine de 99.9 2.1E-23 4.5E-28 212.4 28.9 294 88-428 44-374 (379)
160 TIGR03812 tyr_de_CO2_Arch tyro 99.9 4.3E-23 9.4E-28 209.5 31.2 289 89-422 62-372 (373)
161 cd00613 GDC-P Glycine cleavage 99.9 2.4E-23 5.3E-28 213.2 28.9 326 39-420 21-398 (398)
162 PRK13520 L-tyrosine decarboxyl 99.9 6.3E-23 1.4E-27 208.1 31.4 291 90-425 63-370 (371)
163 TIGR01977 am_tr_V_EF2568 cyste 99.9 6.9E-23 1.5E-27 208.3 28.5 296 86-422 44-375 (376)
164 TIGR01437 selA_rel uncharacter 99.9 9.3E-23 2E-27 205.8 28.3 323 28-424 4-363 (363)
165 PRK06234 methionine gamma-lyas 99.9 4E-22 8.7E-27 203.6 31.6 215 80-343 59-284 (400)
166 PRK05093 argD bifunctional N-s 99.9 1.7E-22 3.8E-27 207.1 29.0 275 111-426 97-400 (403)
167 TIGR02080 O_succ_thio_ly O-suc 99.9 3.2E-22 6.8E-27 202.9 30.3 218 79-343 45-268 (382)
168 PRK13393 5-aminolevulinate syn 99.9 3.7E-22 8.1E-27 204.9 31.3 297 88-426 92-396 (406)
169 PRK02936 argD acetylornithine 99.9 3.5E-22 7.6E-27 203.2 29.6 334 34-424 25-377 (377)
170 PRK00451 glycine dehydrogenase 99.9 2.4E-22 5.3E-27 208.9 27.7 292 89-424 108-446 (447)
171 PRK08133 O-succinylhomoserine 99.9 9.4E-22 2E-26 200.2 30.3 209 88-343 63-277 (390)
172 PRK06767 methionine gamma-lyas 99.9 1.3E-21 2.8E-26 199.2 31.3 290 79-425 55-384 (386)
173 PRK08045 cystathionine gamma-s 99.9 2E-21 4.4E-26 197.1 32.0 218 79-343 46-269 (386)
174 PRK06460 hypothetical protein; 99.9 1.7E-21 3.7E-26 197.3 30.4 210 86-343 45-261 (376)
175 PLN03227 serine palmitoyltrans 99.9 3.4E-21 7.3E-26 196.4 32.7 313 82-426 39-382 (392)
176 PRK14012 cysteine desulfurase; 99.9 7.1E-22 1.5E-26 202.8 27.2 293 87-428 50-381 (404)
177 PRK04073 rocD ornithine--oxo-a 99.9 6.7E-22 1.5E-26 202.3 26.5 270 111-424 97-395 (396)
178 TIGR02006 IscS cysteine desulf 99.9 1.6E-21 3.4E-26 200.0 28.8 294 87-429 48-380 (402)
179 TIGR00713 hemL glutamate-1-sem 99.9 1.1E-21 2.3E-26 202.6 27.7 346 34-426 44-422 (423)
180 cd00614 CGS_like CGS_like: Cys 99.9 3E-21 6.6E-26 195.5 30.3 211 87-344 41-258 (369)
181 TIGR01325 O_suc_HS_sulf O-succ 99.9 5.2E-21 1.1E-25 194.3 30.7 216 80-343 49-270 (380)
182 PRK08088 4-aminobutyrate amino 99.9 2.5E-21 5.5E-26 199.7 28.7 312 91-426 85-423 (425)
183 PRK07504 O-succinylhomoserine 99.9 3.4E-21 7.3E-26 196.5 29.0 217 79-343 59-282 (398)
184 PRK08861 cystathionine gamma-s 99.9 9.8E-21 2.1E-25 191.7 31.9 218 79-343 47-270 (388)
185 PRK07582 cystathionine gamma-l 99.9 6.8E-21 1.5E-25 192.4 30.2 280 79-425 45-364 (366)
186 PRK04260 acetylornithine amino 99.9 5E-21 1.1E-25 194.6 29.0 290 88-423 68-374 (375)
187 PRK07811 cystathionine gamma-s 99.9 1.2E-20 2.7E-25 191.9 31.5 212 86-343 61-278 (388)
188 COG0520 csdA Selenocysteine ly 99.9 1.1E-20 2.4E-25 191.6 30.5 294 88-425 68-404 (405)
189 PRK08776 cystathionine gamma-s 99.9 1.8E-20 3.9E-25 191.2 32.0 216 80-343 55-277 (405)
190 PRK07810 O-succinylhomoserine 99.9 2.9E-21 6.2E-26 197.1 26.1 217 79-343 64-287 (403)
191 PRK07503 methionine gamma-lyas 99.9 1.4E-20 3.1E-25 192.2 31.0 215 80-343 60-283 (403)
192 TIGR01328 met_gam_lyase methio 99.9 1.7E-20 3.6E-25 191.0 31.0 215 80-343 54-277 (391)
193 PRK08249 cystathionine gamma-s 99.9 1E-20 2.3E-25 192.7 29.2 209 87-343 65-280 (398)
194 PRK07050 cystathionine beta-ly 99.9 1.2E-20 2.5E-25 192.2 29.3 217 79-343 59-282 (394)
195 PRK07505 hypothetical protein; 99.9 4.9E-20 1.1E-24 189.0 31.5 292 88-426 93-399 (402)
196 PRK12381 bifunctional succinyl 99.9 3.9E-20 8.5E-25 189.8 30.0 284 111-428 96-401 (406)
197 TIGR03235 DNA_S_dndA cysteine 99.9 3.7E-21 8E-26 194.0 21.3 279 88-413 44-345 (353)
198 COG0156 BioF 7-keto-8-aminopel 99.9 9.8E-20 2.1E-24 181.5 30.9 297 87-423 85-387 (388)
199 TIGR01326 OAH_OAS_sulfhy OAH/O 99.9 1.3E-19 2.9E-24 186.1 30.7 164 80-284 52-219 (418)
200 PTZ00125 ornithine aminotransf 99.9 8.9E-20 1.9E-24 187.1 29.1 283 112-428 89-397 (400)
201 PRK08574 cystathionine gamma-s 99.9 1.9E-19 4.2E-24 182.7 30.9 211 87-343 54-269 (385)
202 PRK00854 rocD ornithine--oxo-a 99.9 4.8E-20 1E-24 189.1 26.8 286 88-425 85-400 (401)
203 PRK05968 hypothetical protein; 99.9 2E-19 4.2E-24 183.2 30.2 280 88-426 65-386 (389)
204 PRK09028 cystathionine beta-ly 99.9 2.4E-19 5.1E-24 181.5 30.1 215 81-343 54-277 (394)
205 PRK08064 cystathionine beta-ly 99.9 1.2E-19 2.6E-24 184.7 28.1 278 88-426 56-382 (390)
206 PRK07269 cystathionine gamma-s 99.9 6.5E-20 1.4E-24 184.7 25.8 296 79-425 48-363 (364)
207 TIGR02379 ECA_wecE TDP-4-keto- 99.9 2.2E-19 4.8E-24 181.8 28.0 174 90-296 31-208 (376)
208 PLN00144 acetylornithine trans 99.9 1.7E-19 3.8E-24 183.2 27.2 288 90-426 57-380 (382)
209 PLN02651 cysteine desulfurase 99.9 6.7E-20 1.5E-24 185.6 24.1 280 88-414 45-364 (364)
210 PLN02955 8-amino-7-oxononanoat 99.9 6.8E-19 1.5E-23 179.4 31.3 296 79-426 142-461 (476)
211 PRK08248 O-acetylhomoserine am 99.9 4.4E-19 9.5E-24 182.2 30.3 156 88-283 66-225 (431)
212 PRK07671 cystathionine beta-ly 99.9 5.8E-19 1.3E-23 178.8 30.7 214 81-343 46-266 (377)
213 TIGR01329 cysta_beta_ly_E cyst 99.9 6.2E-19 1.3E-23 178.8 29.3 281 88-426 49-375 (378)
214 COG1104 NifS Cysteine sulfinat 99.8 3.8E-19 8.3E-24 174.4 25.9 298 87-429 45-380 (386)
215 PRK05939 hypothetical protein; 99.8 1.5E-18 3.3E-23 176.6 31.5 215 81-343 40-284 (397)
216 cd00615 Orn_deC_like Ornithine 99.8 4.3E-20 9.4E-25 181.3 19.5 169 88-284 61-235 (294)
217 PRK05937 8-amino-7-oxononanoat 99.8 1.6E-18 3.5E-23 175.8 30.9 292 87-428 57-352 (370)
218 PRK06702 O-acetylhomoserine am 99.8 1E-18 2.2E-23 178.4 28.9 211 87-343 62-310 (432)
219 cd00616 AHBA_syn 3-amino-5-hyd 99.8 1.2E-18 2.5E-23 175.5 28.7 285 85-421 17-352 (352)
220 KOG1412 Aspartate aminotransfe 99.8 1.5E-18 3.2E-23 161.5 25.9 359 30-428 23-407 (410)
221 PRK04366 glycine dehydrogenase 99.8 2.4E-18 5.1E-23 179.8 30.8 310 85-429 108-451 (481)
222 PRK06084 O-acetylhomoserine am 99.8 3E-18 6.6E-23 175.9 30.6 158 87-283 59-219 (425)
223 TIGR01324 cysta_beta_ly_B cyst 99.8 1.8E-18 3.9E-23 174.9 28.5 208 89-343 53-266 (377)
224 PRK11658 UDP-4-amino-4-deoxy-L 99.8 1.3E-18 2.8E-23 176.8 27.5 171 87-294 34-206 (379)
225 PRK06176 cystathionine gamma-s 99.8 3.7E-18 8E-23 173.1 30.6 215 80-343 45-266 (380)
226 TIGR00700 GABAtrnsam 4-aminobu 99.8 2.5E-18 5.5E-23 177.0 29.5 293 112-425 95-419 (420)
227 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.8 8E-19 1.7E-23 178.3 25.2 172 89-294 30-205 (375)
228 TIGR02618 tyr_phenol_ly tyrosi 99.8 4.9E-18 1.1E-22 171.0 30.0 320 81-427 66-427 (450)
229 PRK06918 4-aminobutyrate amino 99.8 6.2E-18 1.3E-22 175.6 31.8 360 31-428 47-445 (451)
230 PLN02509 cystathionine beta-ly 99.8 3.5E-18 7.6E-23 176.0 29.6 217 81-343 126-349 (464)
231 PF00266 Aminotran_5: Aminotra 99.8 2.8E-18 6.1E-23 174.2 28.0 285 88-416 45-371 (371)
232 TIGR03246 arg_catab_astC succi 99.8 1.4E-17 2.9E-22 170.5 31.0 274 111-426 92-395 (397)
233 PF04864 Alliinase_C: Allinase 99.8 4.5E-19 9.7E-24 168.9 17.8 289 88-424 45-363 (363)
234 PRK09792 4-aminobutyrate trans 99.8 4.8E-17 1E-21 167.4 33.2 289 112-425 102-420 (421)
235 PRK13034 serine hydroxymethylt 99.8 2.7E-17 5.8E-22 169.0 30.9 302 87-427 71-393 (416)
236 PLN02624 ornithine-delta-amino 99.8 1.4E-17 3E-22 173.5 29.0 296 88-426 119-444 (474)
237 COG2008 GLY1 Threonine aldolas 99.8 9.4E-18 2E-22 161.3 25.2 330 41-424 2-341 (342)
238 PRK13237 tyrosine phenol-lyase 99.8 6.2E-17 1.3E-21 163.5 31.9 321 81-427 73-434 (460)
239 KOG1411 Aspartate aminotransfe 99.8 2.4E-18 5.3E-23 162.2 20.2 351 31-426 46-425 (427)
240 PRK05967 cystathionine beta-ly 99.8 2.7E-17 5.8E-22 166.3 29.3 211 89-343 63-280 (395)
241 TIGR01885 Orn_aminotrans ornit 99.8 2.4E-17 5.3E-22 169.0 29.2 291 88-425 81-401 (401)
242 PRK08360 4-aminobutyrate amino 99.8 9.7E-17 2.1E-21 165.7 33.0 357 32-429 35-429 (443)
243 TIGR03588 PseC UDP-4-keto-6-de 99.8 3.4E-17 7.3E-22 166.8 28.7 177 86-294 29-209 (380)
244 PRK04612 argD acetylornithine 99.8 6.3E-17 1.4E-21 165.5 29.0 340 34-426 36-403 (408)
245 TIGR01814 kynureninase kynuren 99.8 4.2E-17 9.1E-22 167.6 27.4 275 109-424 84-405 (406)
246 PRK06777 4-aminobutyrate amino 99.8 3.1E-16 6.7E-21 161.4 33.1 291 111-425 101-420 (421)
247 PRK07495 4-aminobutyrate amino 99.8 2.6E-16 5.7E-21 161.8 32.4 356 33-427 35-422 (425)
248 TIGR03531 selenium_SpcS O-phos 99.8 1.1E-16 2.3E-21 163.4 29.0 310 88-423 103-443 (444)
249 PRK00062 glutamate-1-semialdeh 99.8 5.5E-17 1.2E-21 167.3 27.2 347 34-426 46-424 (426)
250 PRK05994 O-acetylhomoserine am 99.8 2.5E-16 5.3E-21 162.1 31.5 155 88-282 65-223 (427)
251 PTZ00094 serine hydroxymethylt 99.8 1.4E-16 2.9E-21 165.7 28.4 298 91-427 85-409 (452)
252 COG0075 Serine-pyruvate aminot 99.8 7.1E-16 1.5E-20 152.6 31.5 284 112-428 57-365 (383)
253 PRK13580 serine hydroxymethylt 99.8 4.2E-16 9.1E-21 159.3 29.1 351 39-426 50-445 (493)
254 cd01494 AAT_I Aspartate aminot 99.8 1.7E-17 3.7E-22 148.3 16.1 167 88-282 2-169 (170)
255 PRK07812 O-acetylhomoserine am 99.8 9.5E-16 2.1E-20 157.5 30.6 157 88-283 71-231 (436)
256 TIGR02407 ectoine_ectB diamino 99.8 7.4E-16 1.6E-20 158.1 29.7 354 32-426 29-412 (412)
257 PRK08134 O-acetylhomoserine am 99.8 8.7E-16 1.9E-20 157.9 30.2 156 88-282 66-224 (433)
258 KOG1368 Threonine aldolase [Am 99.8 3.2E-16 7E-21 145.4 23.7 336 39-426 22-369 (384)
259 PF01053 Cys_Met_Meta_PP: Cys/ 99.8 1.7E-15 3.7E-20 152.8 30.2 285 81-425 48-386 (386)
260 PRK08117 4-aminobutyrate amino 99.7 1.6E-15 3.4E-20 157.0 29.8 294 111-426 103-429 (433)
261 PLN02880 tyrosine decarboxylas 99.7 2.8E-15 6E-20 156.4 31.5 327 82-427 114-485 (490)
262 KOG1359 Glycine C-acetyltransf 99.7 3.3E-16 7.1E-21 145.0 21.5 304 71-428 99-414 (417)
263 COG1103 Archaea-specific pyrid 99.7 1.2E-15 2.7E-20 139.7 24.4 304 87-427 62-381 (382)
264 KOG1549 Cysteine desulfurase N 99.7 7.1E-16 1.5E-20 152.1 24.5 166 85-284 84-257 (428)
265 PRK06058 4-aminobutyrate amino 99.7 6.8E-15 1.5E-19 152.5 32.8 353 34-426 52-442 (443)
266 PLN02590 probable tyrosine dec 99.7 9.7E-15 2.1E-19 152.6 33.5 326 82-427 162-533 (539)
267 COG4992 ArgD Ornithine/acetylo 99.7 1.3E-15 2.8E-20 149.5 24.8 334 34-427 38-399 (404)
268 PRK02769 histidine decarboxyla 99.7 3.8E-15 8.3E-20 150.6 29.2 292 88-428 63-374 (380)
269 PRK15407 lipopolysaccharide bi 99.7 3.8E-15 8.2E-20 153.6 28.6 172 88-297 65-248 (438)
270 PRK08114 cystathionine beta-ly 99.7 6.1E-15 1.3E-19 149.0 28.9 208 88-343 64-280 (395)
271 COG0399 WecE Predicted pyridox 99.7 5.6E-15 1.2E-19 146.4 27.6 173 88-298 36-212 (374)
272 PLN02724 Molybdenum cofactor s 99.7 3.1E-15 6.7E-20 165.3 27.5 308 88-424 80-486 (805)
273 PRK09264 diaminobutyrate--2-ox 99.7 1.2E-14 2.6E-19 149.9 29.6 289 113-427 104-417 (425)
274 PLN02414 glycine dehydrogenase 99.7 7.9E-15 1.7E-19 161.6 29.5 315 76-428 551-909 (993)
275 PLN03226 serine hydroxymethylt 99.7 2.6E-14 5.6E-19 148.5 30.4 278 118-426 107-419 (475)
276 PRK06434 cystathionine gamma-l 99.7 3.8E-14 8.3E-19 143.3 30.1 207 87-343 65-278 (384)
277 PRK03715 argD acetylornithine 99.7 2E-14 4.3E-19 146.7 28.3 294 89-426 77-393 (395)
278 PRK05613 O-acetylhomoserine am 99.7 3.4E-14 7.4E-19 146.0 30.0 156 88-282 71-230 (437)
279 COG0626 MetC Cystathionine bet 99.7 5.9E-14 1.3E-18 140.0 30.6 282 87-426 64-394 (396)
280 COG0160 GabT 4-aminobutyrate a 99.7 4.2E-14 9.2E-19 142.8 29.8 359 31-426 49-445 (447)
281 cd00611 PSAT_like Phosphoserin 99.7 9.3E-15 2E-19 147.3 24.0 283 88-424 46-354 (355)
282 PRK05964 adenosylmethionine--8 99.7 3.9E-14 8.4E-19 146.2 29.1 344 34-426 38-422 (423)
283 TIGR00709 dat 2,4-diaminobutyr 99.7 8.8E-14 1.9E-18 144.0 31.4 358 31-426 32-435 (442)
284 TIGR01364 serC_1 phosphoserine 99.7 3.2E-14 6.9E-19 142.7 26.9 268 112-426 56-348 (349)
285 PRK06541 hypothetical protein; 99.7 4.6E-14 9.9E-19 146.5 28.8 353 34-426 48-455 (460)
286 PF01041 DegT_DnrJ_EryC1: DegT 99.7 4.2E-14 9.1E-19 143.1 27.8 172 88-297 27-202 (363)
287 TIGR02617 tnaA_trp_ase tryptop 99.7 1.1E-13 2.5E-18 138.3 29.2 361 25-427 29-442 (467)
288 PLN03032 serine decarboxylase; 99.7 7.5E-14 1.6E-18 140.3 28.3 286 87-422 63-372 (374)
289 PRK05769 4-aminobutyrate amino 99.7 2.2E-13 4.8E-18 140.9 31.3 309 90-426 97-439 (441)
290 PRK03080 phosphoserine aminotr 99.7 5.3E-14 1.1E-18 143.0 26.1 288 88-428 50-375 (378)
291 PRK08593 4-aminobutyrate amino 99.6 4.5E-13 9.8E-18 138.7 33.3 291 112-427 104-430 (445)
292 COG0112 GlyA Glycine/serine hy 99.6 1.7E-14 3.7E-19 139.7 20.7 349 40-428 28-392 (413)
293 PF01212 Beta_elim_lyase: Beta 99.6 6.5E-16 1.4E-20 150.1 10.2 188 81-290 24-215 (290)
294 PLN02271 serine hydroxymethylt 99.6 2.6E-13 5.6E-18 139.5 29.2 301 87-425 191-539 (586)
295 TIGR01788 Glu-decarb-GAD gluta 99.6 4.2E-13 9.2E-18 137.6 29.4 312 88-426 78-429 (431)
296 PF00464 SHMT: Serine hydroxym 99.6 1.7E-13 3.7E-18 137.3 25.5 297 88-418 64-397 (399)
297 COG0001 HemL Glutamate-1-semia 99.6 7.6E-13 1.6E-17 131.4 29.3 339 34-427 49-429 (432)
298 TIGR03799 NOD_PanD_pyr putativ 99.6 5.5E-13 1.2E-17 139.6 29.9 320 81-419 120-518 (522)
299 PRK11522 putrescine--2-oxoglut 99.6 5.9E-13 1.3E-17 138.0 29.8 342 35-427 79-452 (459)
300 TIGR03372 putres_am_tran putre 99.6 1.1E-12 2.5E-17 135.0 31.1 333 35-424 72-442 (442)
301 PRK05639 4-aminobutyrate amino 99.6 1.4E-12 3.1E-17 135.1 32.1 294 112-427 114-444 (457)
302 PRK05355 3-phosphoserine/phosp 99.6 1.4E-13 3E-18 138.8 23.7 284 89-426 51-358 (360)
303 PRK07678 aminotransferase; Val 99.6 3.4E-12 7.4E-17 132.4 31.6 295 112-427 106-450 (451)
304 KOG2862 Alanine-glyoxylate ami 99.6 4.8E-12 1E-16 118.6 28.3 283 111-426 68-382 (385)
305 PLN02263 serine decarboxylase 99.6 3.1E-12 6.6E-17 130.8 29.4 292 87-426 130-443 (470)
306 KOG0053 Cystathionine beta-lya 99.6 2.2E-12 4.9E-17 127.3 27.3 188 88-314 79-272 (409)
307 KOG1360 5-aminolevulinate synt 99.6 8.5E-13 1.8E-17 127.2 23.2 301 88-427 218-525 (570)
308 PF01276 OKR_DC_1: Orn/Lys/Arg 99.6 7E-14 1.5E-18 140.6 16.3 187 79-285 58-256 (417)
309 PRK05965 hypothetical protein; 99.6 5.9E-12 1.3E-16 130.8 30.8 305 90-427 90-448 (459)
310 TIGR01366 serC_3 phosphoserine 99.6 1.2E-12 2.5E-17 132.2 24.2 282 88-426 43-360 (361)
311 PRK04311 selenocysteine syntha 99.5 7.4E-12 1.6E-16 129.3 30.4 291 88-425 129-463 (464)
312 PLN02760 4-aminobutyrate:pyruv 99.5 8.9E-12 1.9E-16 130.5 30.4 349 34-427 85-492 (504)
313 PRK09221 beta alanine--pyruvat 99.5 1.2E-11 2.5E-16 128.1 30.5 348 34-426 45-443 (445)
314 PRK07482 hypothetical protein; 99.5 1.2E-11 2.7E-16 128.5 30.9 348 34-426 46-454 (461)
315 PRK13360 omega amino acid--pyr 99.5 1.4E-11 3E-16 127.5 31.0 348 34-426 42-440 (442)
316 PLN02482 glutamate-1-semialdeh 99.5 1.2E-11 2.6E-16 128.5 30.5 332 34-426 95-473 (474)
317 PRK06062 hypothetical protein; 99.5 8.3E-12 1.8E-16 129.5 29.1 347 34-428 49-447 (451)
318 PRK06943 adenosylmethionine--8 99.5 2.6E-11 5.7E-16 125.7 31.8 343 34-426 50-446 (453)
319 PRK00615 glutamate-1-semialdeh 99.5 9.5E-12 2.1E-16 128.1 27.8 345 34-426 49-428 (433)
320 PRK06917 hypothetical protein; 99.5 4E-11 8.6E-16 124.3 32.6 314 90-427 74-438 (447)
321 COG2873 MET17 O-acetylhomoseri 99.5 3.9E-12 8.5E-17 122.2 22.9 290 87-426 63-425 (426)
322 PRK04013 argD acetylornithine/ 99.5 8.2E-12 1.8E-16 125.6 26.6 264 111-426 81-360 (364)
323 PRK07046 aminotransferase; Val 99.5 1.5E-11 3.3E-16 127.4 29.1 332 34-426 71-450 (453)
324 PRK06105 aminotransferase; Pro 99.5 2.4E-11 5.1E-16 126.4 30.6 349 34-427 44-450 (460)
325 PRK08742 adenosylmethionine--8 99.5 2.8E-11 6.1E-16 125.9 30.0 292 111-427 129-468 (472)
326 PRK15029 arginine decarboxylas 99.5 7E-12 1.5E-16 135.0 26.1 177 88-282 207-399 (755)
327 PRK07986 adenosylmethionine--8 99.5 2.8E-11 6.2E-16 124.5 29.1 341 34-426 39-423 (428)
328 PRK12403 putative aminotransfe 99.5 5.5E-11 1.2E-15 123.7 31.5 291 111-427 115-453 (460)
329 PRK05367 glycine dehydrogenase 99.5 2.6E-11 5.6E-16 134.7 30.6 309 86-428 538-877 (954)
330 PRK12389 glutamate-1-semialdeh 99.5 8.9E-11 1.9E-15 121.2 32.1 339 34-426 49-427 (428)
331 PRK07481 hypothetical protein; 99.5 9.7E-11 2.1E-15 121.5 32.4 309 90-426 86-445 (449)
332 COG0076 GadB Glutamate decarbo 99.5 1.2E-11 2.5E-16 127.5 25.1 252 85-362 96-381 (460)
333 PRK06149 hypothetical protein; 99.5 7.4E-11 1.6E-15 133.1 33.5 352 35-426 582-970 (972)
334 PRK07036 hypothetical protein; 99.5 6.4E-11 1.4E-15 123.3 30.5 352 34-427 47-453 (466)
335 PRK06148 hypothetical protein; 99.5 4E-11 8.6E-16 135.4 30.8 353 35-426 621-1010(1013)
336 PRK07030 adenosylmethionine--8 99.5 9.2E-11 2E-15 122.0 30.9 303 90-427 90-447 (466)
337 PRK06082 4-aminobutyrate amino 99.5 1E-10 2.2E-15 121.6 31.2 303 90-427 113-452 (459)
338 PRK06938 diaminobutyrate--2-ox 99.5 9.1E-11 2E-15 122.0 30.6 292 113-426 128-460 (464)
339 PRK07483 hypothetical protein; 99.5 8.7E-11 1.9E-15 121.6 30.3 355 34-426 26-437 (443)
340 PRK07480 putative aminotransfe 99.5 2.4E-11 5.1E-16 126.2 26.1 350 34-427 46-449 (456)
341 PRK06916 adenosylmethionine--8 99.5 1.2E-10 2.5E-15 121.2 31.1 285 112-427 117-456 (460)
342 PRK05630 adenosylmethionine--8 99.4 8.7E-11 1.9E-15 120.8 28.7 337 34-426 36-420 (422)
343 PRK06173 adenosylmethionine--8 99.4 1.1E-10 2.4E-15 120.2 29.2 281 111-426 104-425 (429)
344 TIGR00508 bioA adenosylmethion 99.4 7.7E-11 1.7E-15 121.6 27.8 280 112-426 106-426 (427)
345 PRK06931 diaminobutyrate--2-ox 99.4 1.6E-10 3.5E-15 120.0 30.3 357 34-426 54-454 (459)
346 PRK15400 lysine decarboxylase 99.4 5E-11 1.1E-15 127.1 25.7 169 88-278 197-375 (714)
347 PRK12566 glycine dehydrogenase 99.4 8.3E-11 1.8E-15 127.9 27.6 320 74-428 524-878 (954)
348 TIGR00461 gcvP glycine dehydro 99.4 9.8E-11 2.1E-15 128.1 27.9 305 86-428 526-869 (939)
349 TIGR01365 serC_2 phosphoserine 99.4 6.9E-11 1.5E-15 118.9 24.7 274 113-424 60-371 (374)
350 TIGR00474 selA seryl-tRNA(sec) 99.4 1.1E-10 2.4E-15 120.3 26.7 285 88-420 124-453 (454)
351 KOG1357 Serine palmitoyltransf 99.4 6.2E-12 1.3E-16 123.3 15.8 297 88-424 184-500 (519)
352 PRK13578 ornithine decarboxyla 99.4 1.1E-10 2.3E-15 124.8 26.4 176 88-284 176-370 (720)
353 PF00282 Pyridoxal_deC: Pyrido 99.4 8.9E-11 1.9E-15 118.7 24.4 260 81-354 70-367 (373)
354 PRK15399 lysine decarboxylase 99.4 2.9E-10 6.2E-15 121.4 27.8 174 88-284 197-382 (713)
355 PRK06209 glutamate-1-semialdeh 99.3 6E-10 1.3E-14 115.1 26.4 331 32-427 42-406 (431)
356 PRK08297 L-lysine aminotransfe 99.3 8E-10 1.7E-14 114.4 26.6 278 111-426 110-441 (443)
357 PLN02414 glycine dehydrogenase 99.3 9.2E-10 2E-14 122.0 28.3 276 88-422 150-465 (993)
358 PRK05367 glycine dehydrogenase 99.3 8.3E-10 1.8E-14 122.8 28.1 276 88-421 123-437 (954)
359 TIGR00699 GABAtrns_euk 4-amino 99.2 2.6E-09 5.7E-14 110.5 24.8 278 112-424 123-464 (464)
360 COG3033 TnaA Tryptophanase [Am 99.2 3.8E-09 8.1E-14 101.2 23.3 326 79-427 72-445 (471)
361 KOG1404 Alanine-glyoxylate ami 99.2 6.7E-09 1.4E-13 100.7 24.8 358 21-420 24-432 (442)
362 PLN02452 phosphoserine transam 99.2 4.8E-09 1E-13 105.6 24.9 266 113-426 73-363 (365)
363 COG0161 BioA Adenosylmethionin 99.2 1.1E-08 2.4E-13 103.2 27.0 307 88-426 89-443 (449)
364 KOG1358 Serine palmitoyltransf 99.2 1.2E-09 2.7E-14 105.6 18.8 308 82-425 135-464 (467)
365 TIGR03251 LAT_fam L-lysine 6-t 99.2 7.5E-09 1.6E-13 107.0 26.2 276 111-422 103-430 (431)
366 COG1982 LdcC Arginine/lysine/o 99.2 1.1E-08 2.3E-13 105.5 26.7 170 88-284 72-247 (557)
367 PLN02974 adenosylmethionine-8- 99.2 3.7E-08 8E-13 108.0 31.3 215 190-424 583-816 (817)
368 TIGR03811 tyr_de_CO2_Ent tyros 99.1 2.3E-08 4.9E-13 106.1 25.4 199 82-291 115-405 (608)
369 PF06838 Met_gamma_lyase: Meth 99.1 4.1E-08 8.9E-13 95.2 24.0 192 76-298 43-253 (403)
370 PF00202 Aminotran_3: Aminotra 99.0 1.5E-08 3.2E-13 101.5 19.1 250 34-313 12-291 (339)
371 KOG1401 Acetylornithine aminot 99.0 1.4E-07 3.1E-12 92.3 23.8 299 89-427 101-431 (433)
372 PRK12462 phosphoserine aminotr 99.0 2.9E-07 6.3E-12 92.0 24.4 328 41-426 6-362 (364)
373 COG1003 GcvP Glycine cleavage 98.9 4.2E-07 9.2E-12 89.6 24.0 317 76-429 92-450 (496)
374 KOG0629 Glutamate decarboxylas 98.9 6.4E-07 1.4E-11 88.0 23.7 312 90-425 141-508 (510)
375 KOG1403 Predicted alanine-glyo 98.9 2.2E-07 4.8E-12 87.1 18.6 292 112-425 103-436 (452)
376 KOG1402 Ornithine aminotransfe 98.8 1E-06 2.3E-11 83.8 22.1 320 46-425 70-426 (427)
377 KOG2467 Glycine/serine hydroxy 98.8 1.4E-06 2.9E-11 84.1 20.8 283 109-425 101-425 (477)
378 TIGR00461 gcvP glycine dehydro 98.8 3.1E-06 6.6E-11 93.4 25.6 271 88-421 111-426 (939)
379 COG3844 Kynureninase [Amino ac 98.7 5E-06 1.1E-10 79.3 21.9 270 109-426 91-402 (407)
380 COG4100 Cystathionine beta-lya 98.7 1.9E-06 4.1E-11 81.1 17.8 194 76-298 54-264 (416)
381 KOG0628 Aromatic-L-amino-acid/ 98.7 7.3E-06 1.6E-10 81.5 22.3 315 85-426 108-471 (511)
382 PF05889 SLA_LP_auto_ag: Solub 98.6 4.5E-06 9.8E-11 82.7 20.8 297 112-425 75-389 (389)
383 KOG1383 Glutamate decarboxylas 98.6 1E-05 2.2E-10 80.7 21.8 304 86-429 116-449 (491)
384 COG1921 SelA Selenocysteine sy 98.5 1.7E-05 3.6E-10 78.8 20.8 178 110-313 82-267 (395)
385 COG0403 GcvP Glycine cleavage 98.5 0.00038 8.3E-09 69.2 28.3 277 90-423 124-447 (450)
386 PF02347 GDC-P: Glycine cleava 98.4 4.9E-05 1.1E-09 77.1 20.3 262 109-420 125-429 (429)
387 PF03841 SelA: L-seryl-tRNA se 98.2 2.1E-06 4.6E-11 84.3 5.5 162 111-293 62-235 (367)
388 KOG1405 4-aminobutyrate aminot 98.0 0.00073 1.6E-08 65.4 18.4 217 175-426 255-483 (484)
389 KOG2040 Glycine dehydrogenase 98.0 0.005 1.1E-07 64.1 25.1 314 76-428 565-920 (1001)
390 PRK12566 glycine dehydrogenase 97.9 0.0026 5.6E-08 70.5 23.3 270 89-421 127-439 (954)
391 PLN02672 methionine S-methyltr 97.6 0.0027 5.9E-08 71.7 17.7 205 79-306 419-640 (1082)
392 COG1932 SerC Phosphoserine ami 97.5 0.017 3.7E-07 56.7 19.6 332 39-427 5-364 (365)
393 KOG3843 Predicted serine hydro 97.2 0.018 3.8E-07 53.9 15.0 254 157-426 124-402 (432)
394 KOG3846 L-kynurenine hydrolase 96.7 0.2 4.4E-06 48.1 17.7 303 87-426 112-461 (465)
395 KOG2790 Phosphoserine aminotra 95.8 0.38 8.3E-06 45.8 14.5 334 37-427 5-369 (370)
396 KOG2040 Glycine dehydrogenase 95.0 2.1 4.6E-05 45.4 18.0 244 132-421 202-478 (1001)
397 KOG1201 Hydroxysteroid 17-beta 88.1 7.6 0.00017 37.6 11.4 140 109-274 36-182 (300)
398 PF00106 adh_short: short chai 84.4 14 0.00029 32.1 10.8 100 114-219 3-110 (167)
399 PRK08265 short chain dehydroge 81.5 25 0.00054 33.3 12.1 100 112-217 7-107 (261)
400 COG2102 Predicted ATPases of P 81.0 18 0.0004 33.5 10.1 99 114-228 4-116 (223)
401 PF05368 NmrA: NmrA-like famil 79.2 12 0.00025 34.9 8.8 96 114-228 1-98 (233)
402 PRK04296 thymidine kinase; Pro 77.1 37 0.0008 30.7 11.1 123 120-265 16-141 (190)
403 PRK07063 short chain dehydroge 75.8 45 0.00098 31.3 12.0 83 111-198 7-93 (260)
404 PRK05872 short chain dehydroge 75.4 41 0.0009 32.6 11.8 84 110-198 8-92 (296)
405 PRK12936 3-ketoacyl-(acyl-carr 74.6 51 0.0011 30.4 11.9 83 112-200 7-89 (245)
406 PRK06483 dihydromonapterin red 74.3 46 0.001 30.7 11.4 77 113-197 4-80 (236)
407 PRK06500 short chain dehydroge 73.8 53 0.0011 30.5 11.8 81 112-198 7-87 (249)
408 PRK12481 2-deoxy-D-gluconate 3 73.0 54 0.0012 30.8 11.7 82 112-200 9-91 (251)
409 PRK06463 fabG 3-ketoacyl-(acyl 72.9 55 0.0012 30.7 11.7 80 112-199 8-87 (255)
410 PRK06935 2-deoxy-D-gluconate 3 72.3 48 0.0011 31.1 11.2 81 111-198 15-98 (258)
411 PRK07067 sorbitol dehydrogenas 71.2 61 0.0013 30.4 11.6 81 112-198 7-87 (257)
412 PF08659 KR: KR domain; Inter 70.1 10 0.00022 34.1 5.5 99 114-218 3-110 (181)
413 TIGR01832 kduD 2-deoxy-D-gluco 70.0 79 0.0017 29.3 12.0 83 110-198 4-87 (248)
414 PRK05717 oxidoreductase; Valid 69.3 78 0.0017 29.6 11.9 83 110-198 9-91 (255)
415 PRK08589 short chain dehydroge 69.2 77 0.0017 30.1 11.9 81 112-200 7-90 (272)
416 PRK06194 hypothetical protein; 68.9 77 0.0017 30.3 11.9 81 112-198 7-90 (287)
417 PRK07231 fabG 3-ketoacyl-(acyl 68.2 77 0.0017 29.4 11.5 85 111-200 5-90 (251)
418 PRK05867 short chain dehydroge 67.8 92 0.002 29.1 12.0 81 112-198 10-93 (253)
419 PRK06841 short chain dehydroge 67.5 87 0.0019 29.2 11.8 82 112-199 16-97 (255)
420 PRK05876 short chain dehydroge 67.5 86 0.0019 30.0 11.9 101 111-218 6-112 (275)
421 PRK06139 short chain dehydroge 66.9 74 0.0016 31.6 11.5 82 111-198 7-91 (330)
422 PRK07523 gluconate 5-dehydroge 66.8 1E+02 0.0022 28.7 12.2 82 111-198 10-94 (255)
423 COG1087 GalE UDP-glucose 4-epi 66.4 25 0.00053 34.4 7.4 115 113-248 2-132 (329)
424 PRK08309 short chain dehydroge 66.3 73 0.0016 28.5 10.3 98 114-226 3-101 (177)
425 PRK08862 short chain dehydroge 65.4 72 0.0016 29.6 10.5 82 112-200 6-91 (227)
426 PF02662 FlpD: Methyl-viologen 65.3 25 0.00054 29.6 6.6 59 157-225 28-91 (124)
427 COG0329 DapA Dihydrodipicolina 64.7 1.4E+02 0.0031 29.2 12.8 108 89-232 56-167 (299)
428 PF13460 NAD_binding_10: NADH( 64.7 34 0.00074 30.2 8.0 90 114-225 1-90 (183)
429 PRK07825 short chain dehydroge 64.3 87 0.0019 29.7 11.2 80 112-198 6-85 (273)
430 PRK08278 short chain dehydroge 64.2 1.1E+02 0.0025 29.0 12.0 81 112-198 7-97 (273)
431 PRK06182 short chain dehydroge 64.1 94 0.002 29.4 11.4 97 113-218 5-103 (273)
432 PRK08063 enoyl-(acyl carrier p 64.0 88 0.0019 29.0 11.0 81 113-199 6-90 (250)
433 PRK07791 short chain dehydroge 63.7 86 0.0019 30.2 11.1 82 112-200 7-100 (286)
434 PRK08085 gluconate 5-dehydroge 63.6 1.2E+02 0.0025 28.4 11.8 102 111-218 9-115 (254)
435 COG4221 Short-chain alcohol de 63.3 76 0.0016 30.0 9.9 100 113-219 7-111 (246)
436 PRK07478 short chain dehydroge 63.0 78 0.0017 29.6 10.5 101 112-218 7-113 (254)
437 TIGR00290 MJ0570_dom MJ0570-re 62.5 1E+02 0.0022 28.9 10.6 99 114-228 4-115 (223)
438 cd02742 GH20_hexosaminidase Be 62.3 14 0.00031 36.2 5.3 67 150-228 23-89 (303)
439 PRK08277 D-mannonate oxidoredu 62.0 1.2E+02 0.0026 28.8 11.7 82 111-198 10-94 (278)
440 PRK08226 short chain dehydroge 61.8 1.4E+02 0.003 28.0 12.0 82 111-199 6-90 (263)
441 PF03652 UPF0081: Uncharacteri 61.8 25 0.00055 30.0 6.1 59 171-234 36-98 (135)
442 PRK05855 short chain dehydroge 61.5 1.6E+02 0.0035 31.3 13.8 124 89-218 279-421 (582)
443 PRK07097 gluconate 5-dehydroge 61.4 1.3E+02 0.0028 28.3 11.8 83 111-199 10-95 (265)
444 PRK08220 2,3-dihydroxybenzoate 61.3 1.3E+02 0.0028 27.9 11.7 77 110-198 7-83 (252)
445 PRK07109 short chain dehydroge 61.3 1E+02 0.0022 30.5 11.4 81 111-197 8-91 (334)
446 PRK06196 oxidoreductase; Provi 61.2 77 0.0017 31.0 10.4 81 111-198 26-106 (315)
447 PRK12859 3-ketoacyl-(acyl-carr 61.0 75 0.0016 29.9 10.0 101 111-218 6-125 (256)
448 PRK06079 enoyl-(acyl carrier p 60.8 53 0.0012 30.9 8.9 83 111-200 7-91 (252)
449 PRK06114 short chain dehydroge 60.8 1.1E+02 0.0025 28.5 11.2 82 111-198 8-93 (254)
450 PRK07024 short chain dehydroge 60.6 1.3E+02 0.0029 28.1 11.7 79 113-197 4-84 (257)
451 PRK08643 acetoin reductase; Va 60.5 1.2E+02 0.0026 28.2 11.4 81 113-199 4-87 (256)
452 PRK12935 acetoacetyl-CoA reduc 60.2 1.2E+02 0.0025 28.2 11.1 82 112-199 7-92 (247)
453 PF02230 Abhydrolase_2: Phosph 60.1 98 0.0021 28.3 10.4 128 88-223 83-215 (216)
454 cd06568 GH20_SpHex_like A subg 59.5 11 0.00025 37.4 4.1 68 150-228 25-92 (329)
455 PRK06128 oxidoreductase; Provi 59.3 99 0.0022 29.9 10.8 100 112-218 56-164 (300)
456 PRK07666 fabG 3-ketoacyl-(acyl 59.2 1.5E+02 0.0032 27.3 11.7 101 112-218 8-113 (239)
457 KOG1199 Short-chain alcohol de 59.0 52 0.0011 29.3 7.5 78 114-198 12-90 (260)
458 PRK12937 short chain dehydroge 58.8 1.2E+02 0.0026 27.9 10.9 82 111-198 5-90 (245)
459 TIGR00683 nanA N-acetylneurami 58.8 1.8E+02 0.0039 28.2 13.1 88 114-231 73-164 (290)
460 cd06569 GH20_Sm-chitobiase-lik 58.6 17 0.00037 37.9 5.3 78 150-228 29-114 (445)
461 COG2984 ABC-type uncharacteriz 58.6 1.6E+02 0.0036 29.0 11.5 127 81-232 66-196 (322)
462 smart00642 Aamy Alpha-amylase 58.5 41 0.00089 29.8 7.1 26 209-234 68-93 (166)
463 PRK06484 short chain dehydroge 58.4 93 0.002 32.8 11.1 80 112-197 6-85 (520)
464 cd00952 CHBPH_aldolase Trans-o 58.4 1.4E+02 0.0031 29.3 11.7 89 114-232 80-172 (309)
465 PRK06200 2,3-dihydroxy-2,3-dih 58.1 60 0.0013 30.6 8.8 81 111-197 6-86 (263)
466 PRK07792 fabG 3-ketoacyl-(acyl 58.1 1.8E+02 0.004 28.2 12.4 82 109-197 10-95 (306)
467 PRK08263 short chain dehydroge 57.9 1.2E+02 0.0027 28.7 11.0 100 113-218 5-106 (275)
468 KOG1200 Mitochondrial/plastidi 57.8 1.4E+02 0.0031 27.4 10.1 101 114-219 17-120 (256)
469 PRK09242 tropinone reductase; 57.8 1.6E+02 0.0035 27.4 11.8 102 112-218 10-117 (257)
470 PRK10538 malonic semialdehyde 57.7 1.3E+02 0.0029 27.9 11.1 79 114-198 3-81 (248)
471 cd06562 GH20_HexA_HexB-like Be 57.5 16 0.00035 36.7 4.8 63 150-228 25-87 (348)
472 PRK06482 short chain dehydroge 57.4 1.2E+02 0.0026 28.7 10.9 80 113-198 4-83 (276)
473 PRK06179 short chain dehydroge 57.3 1.5E+02 0.0032 27.9 11.5 95 113-218 6-102 (270)
474 PRK07856 short chain dehydroge 57.3 1.5E+02 0.0033 27.6 11.4 77 111-198 6-82 (252)
475 PRK08993 2-deoxy-D-gluconate 3 57.3 1.7E+02 0.0036 27.4 12.3 82 112-200 11-93 (253)
476 COG1105 FruK Fructose-1-phosph 57.2 1.8E+02 0.0039 28.7 11.7 62 170-234 108-169 (310)
477 PRK12743 oxidoreductase; Provi 57.0 1.2E+02 0.0026 28.4 10.6 80 113-198 4-87 (256)
478 TIGR03325 BphB_TodD cis-2,3-di 57.0 66 0.0014 30.3 8.9 81 111-197 5-85 (262)
479 PRK06484 short chain dehydroge 56.3 1.1E+02 0.0023 32.4 11.1 79 113-197 271-349 (520)
480 PRK12384 sorbitol-6-phosphate 55.9 1.5E+02 0.0032 27.7 11.1 81 113-198 4-88 (259)
481 PRK06124 gluconate 5-dehydroge 55.7 1.8E+02 0.0038 27.1 12.0 85 108-198 8-95 (256)
482 PRK05786 fabG 3-ketoacyl-(acyl 55.5 1.3E+02 0.0027 27.7 10.4 84 112-200 6-90 (238)
483 PRK07074 short chain dehydroge 55.5 1.7E+02 0.0036 27.3 11.4 82 113-199 4-85 (257)
484 PRK08303 short chain dehydroge 55.1 1.7E+02 0.0036 28.6 11.5 82 112-200 9-103 (305)
485 PRK13394 3-hydroxybutyrate deh 54.9 1.8E+02 0.0039 27.0 11.8 81 112-198 8-91 (262)
486 PRK06398 aldose dehydrogenase; 54.8 1.6E+02 0.0035 27.6 11.2 93 112-218 7-101 (258)
487 COG0505 CarA Carbamoylphosphat 54.8 30 0.00065 34.4 5.9 56 133-204 177-234 (368)
488 TIGR02415 23BDH acetoin reduct 54.7 1.5E+02 0.0034 27.4 11.0 86 114-205 3-91 (254)
489 PRK05693 short chain dehydroge 54.4 1.7E+02 0.0037 27.6 11.4 97 113-218 3-101 (274)
490 PRK05678 succinyl-CoA syntheta 53.9 50 0.0011 32.3 7.4 42 175-228 79-120 (291)
491 PRK12823 benD 1,6-dihydroxycyc 53.7 1.9E+02 0.0041 26.9 11.5 80 111-197 8-90 (260)
492 PRK07985 oxidoreductase; Provi 53.6 1.6E+02 0.0035 28.4 11.1 80 112-197 50-134 (294)
493 PRK08594 enoyl-(acyl carrier p 53.4 1.9E+02 0.004 27.3 11.3 84 111-200 7-95 (257)
494 PRK08267 short chain dehydroge 53.3 1.9E+02 0.004 27.1 11.3 81 113-198 3-84 (260)
495 PRK07890 short chain dehydroge 53.2 1.2E+02 0.0025 28.3 9.9 81 112-198 6-89 (258)
496 PRK07062 short chain dehydroge 53.0 2E+02 0.0043 27.0 12.0 82 111-197 8-93 (265)
497 PRK08339 short chain dehydroge 52.9 1.9E+02 0.0041 27.3 11.3 100 112-218 9-114 (263)
498 TIGR00289 conserved hypothetic 52.9 1.7E+02 0.0036 27.4 10.4 62 152-228 54-115 (222)
499 PRK07677 short chain dehydroge 52.6 1.8E+02 0.0038 27.1 11.0 100 113-218 3-107 (252)
500 PF00728 Glyco_hydro_20: Glyco 52.6 9.3 0.0002 38.2 2.2 65 151-228 26-90 (351)
No 1
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-106 Score=769.28 Aligned_cols=425 Identities=61% Similarity=1.096 Sum_probs=416.8
Q ss_pred ccccchhhccCCCCCCccchhhhhhcCCCCCCCCCCccccccccccccccHHHHHHHHHhCCCCcccccccccccccccc
Q 011801 2 GILSKIATNNGHGEDSAYFDGWKAFDRNPFHPTQNPGGVIQLGLAENQLCFDLIKDWITKNPYASICTAEGVEVFKDIAI 81 (477)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~n~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (477)
.+||++|.+++|||+|+||.||++|++||||+++||.|+||||++||++|+|++++|+.++|++..|+.+|...+++++.
T Consensus 37 ~~lS~~~~~~~~~e~S~yf~g~~~y~~npy~~~~Np~GiIQmGlaENqlc~DL~~~wl~k~~~~~~~~~eg~~~f~~la~ 116 (471)
T KOG0256|consen 37 NLLSSKAVDDKHGEDSSYFYGWKAYEKNPYDPIKNPLGIIQMGLAENQLCFDLIESWLSKNPEASNCTREGQSSFDELAM 116 (471)
T ss_pred hhcccccccccccccchHHHHHHhcccCCCCCCCCchHHHHhhhhhhHHHHHHHHHHHHhChhhhhcccccccchhhHhh
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEE
Q 011801 82 FQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIV 161 (477)
Q Consensus 82 Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~ 161 (477)
|+||+|++.+|+++|+||.+.+|+++.++|+++++++|+|.|++++++||++|||++|||+|+|++|++.++|++|++++
T Consensus 117 fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~rTgveiv 196 (471)
T KOG0256|consen 117 FQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRWRTGVEIV 196 (471)
T ss_pred cccccCchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccceeccCceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCC
Q 011801 162 PVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSP 241 (477)
Q Consensus 162 ~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~ 241 (477)
||.|.++++|++|.++||++++++++.+.++|+|+++||+||.|++++++++..+++||.++|+|||+||+|++.+|+..
T Consensus 197 pv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~ 276 (471)
T KOG0256|consen 197 PVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFDKS 276 (471)
T ss_pred EEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhcccCCCchHHHHHHHHhcCChhhHHHH
Q 011801 242 KFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNF 321 (477)
Q Consensus 242 ~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~~~~~vs~~~q~~~~~~L~~~~~~~~~ 321 (477)
.|.|+.++..+.+..++++|+++|+||+||+||+|+|.|++.|+.++.++++|++|+.+|+++|+.++.+|+|..|+++|
T Consensus 277 ~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~kmssf~~vSs~tQ~~la~LLSD~~f~~~y 356 (471)
T KOG0256|consen 277 EFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMSSFGLVSSQTQYLLASLLSDEEFTREY 356 (471)
T ss_pred CceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHHHhhccCCcHHHHHHHHHHhchHHHHHHH
Confidence 99999999875544679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEE
Q 011801 322 LVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWF 401 (477)
Q Consensus 322 ~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~ 401 (477)
++++.+|++.|++++.++|+++||+|.++++|+|+|+++++.++..+++.|++||++++.+.||+++||++|+|.+||||
T Consensus 357 l~en~~Rl~~rh~~~~~gLk~lgI~cl~s~AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnlSpG~s~~C~EpGWF 436 (471)
T KOG0256|consen 357 LRENNKRLRIRHRYIVEGLKALGIPCLKSNAGLFCWVDLRKLLTSLTFEGELELWERILDNVKLNLSPGSSCHCHEPGWF 436 (471)
T ss_pred HHHHHHHHHHHHHHHHhhHHhcCCceeecCCeeEEEEEhHHhcCcCChHHHHHHHHHHHHhhccccCCCCcceecCCCeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeccCCHHHHHHHHHHHHHHHhh
Q 011801 402 RVCFANMDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 402 Rl~~~~~~~e~l~~~l~~l~~~~~~ 426 (477)
|+||+++.++.++.+++||+.++.+
T Consensus 437 RvcFAn~~~~t~~~am~Ri~~~~~~ 461 (471)
T KOG0256|consen 437 RVCFANMSEETLEVAMRRLKQFLDS 461 (471)
T ss_pred EEEeccCCHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999984
No 2
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=7.5e-94 Score=747.01 Aligned_cols=469 Identities=69% Similarity=1.187 Sum_probs=423.4
Q ss_pred CccccchhhccCCCCCCccchhhhhhcCCCCCCCCCCccccccccccccccHHHHHHHHHhCCCCccccccccccccccc
Q 011801 1 MGILSKIATNNGHGEDSAYFDGWKAFDRNPFHPTQNPGGVIQLGLAENQLCFDLIKDWITKNPYASICTAEGVEVFKDIA 80 (477)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~n~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (477)
|++||++|++++|||+|+||+||++|+++|||+..||+|+|+|+++||++++|++++|+++++++.+|..+++..+.++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~np~g~i~l~~aEN~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (496)
T PLN02376 9 GAILSKIATNDQHGENSEYFDGWKAYDKDPFHLSRNPHGIIQMGLAENQLCLDLIKDWVKENPEASICTLEGIHQFSDIA 88 (496)
T ss_pred hhhhhhhhcccccCCCCchHHHHHHHhCCCCCcccCCCceEEeecchhhhhHHHHHHHHHhCchhhccccccccccchhh
Confidence 35899999999999999999999999999999999999999999999999999999999999999999988888888899
Q ss_pred ccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEE
Q 011801 81 IFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQI 160 (477)
Q Consensus 81 ~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~ 160 (477)
.|++++|.++||++||+|+++.+|.++.++|++|++|+|+++|+++++++|++|||.|++++|+|++|...+++..|+++
T Consensus 89 ~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~v 168 (496)
T PLN02376 89 NFQDYHGLKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEI 168 (496)
T ss_pred ccCCCCCcHHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhhCCCEE
Confidence 99999999999999999999988877889999999999999999999999999999999999999999998886559999
Q ss_pred EEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCC
Q 011801 161 VPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSS 240 (477)
Q Consensus 161 ~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~ 240 (477)
++++++.+++|++|+++++++++++.+.+.++|+|++||||||||++++.+++++|+++|++++++||+||+|++++|++
T Consensus 169 v~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~ 248 (496)
T PLN02376 169 IPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAG 248 (496)
T ss_pred EEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCC
Confidence 99999877789999999999987765556789999999999999999999999999999999999999999999999988
Q ss_pred CCcccHHHhhhhcc---CCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhcccCCCchHHHHHHHHhcCChhh
Q 011801 241 PKFTSVAEVIQEMD---CNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEF 317 (477)
Q Consensus 241 ~~~~s~~~~~~~~~---~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~~~~~vs~~~q~~~~~~L~~~~~ 317 (477)
+.+.++.++..+.+ ++.+++++++||||+||+||+|+||++++++.+....+++..++.+|+++|.+++.+|++++|
T Consensus 249 ~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~~~~~~~~~~~~vs~~~Q~a~~~~L~d~~~ 328 (496)
T PLN02376 249 GDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVSCARKMSSFGLVSSQTQLMLASMLSDDQF 328 (496)
T ss_pred CCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHHHHHHHHHhhcCCCCHHHHHHHHHHhCChhH
Confidence 78888887754211 123578889999999999999999999988888888888888888999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchhhc-cCchHHHHHHHHHHHhcCeEEeCCCCCCCC
Q 011801 318 VDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKE-KTLEGEIALWRTIVNDVKLNVSPGSSFQCT 396 (477)
Q Consensus 318 ~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~-~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~ 396 (477)
+++++++.+++++++++.+.+.|++.|+++.++++|+|+|++++..+.. .+++.|.++++.+++++||.|.||+.|++.
T Consensus 329 ~~~~l~~~r~~l~~r~~~l~~~L~~~gi~~~~~~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~ 408 (496)
T PLN02376 329 VDNFLMESSRRLGIRHKVFTTGIKKADIACLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCT 408 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCccccCCC
Confidence 8899999999999999999999999999999999999999999876544 556677899999999999999999999988
Q ss_pred CCCEEEEEeccCCHHHHHHHHHHHHHHHhhhhcCcc--------------cccccc-ccceeeeccccccccccCCCCCC
Q 011801 397 EPGWFRVCFANMDDDTLQVALNRIAAFVQQDKESEK--------------PTKKRW-QQNLRVSFSSRIYEQGVMSPHMM 461 (477)
Q Consensus 397 ~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~~~~~~~--------------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 461 (477)
+++||||||+.+++++++++++||++++.++++... .++++| +++||||| .|++|+. +|
T Consensus 409 ~~g~~Ri~fa~~~~~~l~~al~rl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-----~~ 482 (496)
T PLN02376 409 EPGWFRICFANMDDDTLHVALGRIQDFVSKNKNKIVEKASENDQVIQNKNAKKLKWRQSNLRLSF-RRLYEDG-----LS 482 (496)
T ss_pred CCCEEEEEeeCCCHHHHHHHHHHHHHHHHHhhhcccccccccccccchhhcchhhhhccceeecc-chhhhcc-----cc
Confidence 899999999988899999999999999976554211 125779 46799998 4568875 57
Q ss_pred CCCCCCCCCccccc
Q 011801 462 SPHSPIPQSPLVRA 475 (477)
Q Consensus 462 ~~~~~~~~~~~~~~ 475 (477)
|||+|+||||||||
T Consensus 483 ~~~~~~~~~~~~~~ 496 (496)
T PLN02376 483 SPGIMSPHSPLLRA 496 (496)
T ss_pred CCCCCCCCCcccCC
Confidence 99999999999997
No 3
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=2.1e-78 Score=624.37 Aligned_cols=428 Identities=58% Similarity=1.032 Sum_probs=391.8
Q ss_pred ccccchhhccCCCCCCccchhhhhhcCCCCCCCCCCccccccccccccccHHHHHHHHHhCCCCcccccccccccccccc
Q 011801 2 GILSKIATNNGHGEDSAYFDGWKAFDRNPFHPTQNPGGVIQLGLAENQLCFDLIKDWITKNPYASICTAEGVEVFKDIAI 81 (477)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~n~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (477)
.+||+.++++.|+++++||.||++|..||||+..||+|+|+||++||.++.|++.+|++++++.++|...+...+.++..
T Consensus 11 ~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~np~g~i~l~~aeN~l~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (447)
T PLN02607 11 VGLSKVAVSETHGEDSPYFAGWKAYDEDPYDESHNPSGVIQMGLAENQVSFDLLEEYLKQHPEASSWGGKGAPGFRENAL 90 (447)
T ss_pred hhhhhhhhhcccCCCchHHHHHHHhcCCCCCcccCCCceEEEechhhhhhHHHHHHHHHhCchhhccccccccccchhhc
Confidence 48999999999999999999999999999999999999999999999999999999999999887776556556677888
Q ss_pred cCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEE
Q 011801 82 FQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIV 161 (477)
Q Consensus 82 Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~ 161 (477)
|+++.|.++||+++|+|+++.++..++++|++|++|+|+++|++++++++++|||.|++++|+|++|...+.++.|++++
T Consensus 91 y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv 170 (447)
T PLN02607 91 FQDYHGLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGVKIV 170 (447)
T ss_pred cCCCcchHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCcEEE
Confidence 99999999999999999998888767899999999999999999999999999999999999999999988876699999
Q ss_pred EEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCC
Q 011801 162 PVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSP 241 (477)
Q Consensus 162 ~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~ 241 (477)
+|+++++++|.+++++++++++++++.+.++|+|+++|||||||.+++++++++|+++|+++|++||+||+|++++|+.+
T Consensus 171 ~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~ 250 (447)
T PLN02607 171 PIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSAS 250 (447)
T ss_pred EEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCC
Confidence 99998778899999999999998888888999999999999999999999999999999999999999999999889887
Q ss_pred CcccHHHhhhhcc-C-CCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhcccCCCchHHHHHHHHhcCChhhHH
Q 011801 242 KFTSVAEVIQEMD-C-NRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVD 319 (477)
Q Consensus 242 ~~~s~~~~~~~~~-~-~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~~~~~vs~~~q~~~~~~L~~~~~~~ 319 (477)
+|.|+.+++.+.+ . ..+++|+++||||+||+||+|+||+++.++.+...++++..+..+|+++|.+++.+|++++|++
T Consensus 251 ~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~~l~~~~~~~~~~~~~s~~~q~~~~~~L~d~~~~~ 330 (447)
T PLN02607 251 EFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFTLVSSQTQHLLASMLSDEEFTE 330 (447)
T ss_pred CcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcCHHHHHHHHHHhhcCCCCHHHHHHHHHHhCCchhHH
Confidence 8889887754321 1 2578999999999999999999999998887877777777777789999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCC
Q 011801 320 NFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPG 399 (477)
Q Consensus 320 ~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~ 399 (477)
+++++++++++++++.+++.|++.|+++.++++|+|+|++++..+...+.+.|.++|..+++++||.|.||+.|++.++|
T Consensus 331 ~~l~~~r~~l~~~~~~~~~~L~~~gi~~~~~~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g 410 (447)
T PLN02607 331 NYIRTNRERLRKRYEMIVQGLRRAGIECLKGNAGLFCWMNLSPLLETPTREGELALWDSILREVKLNISPGSSCHCSEPG 410 (447)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCeeEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcCccccCCCCCC
Confidence 89999999999999999999999999999999999999999876554455667789999998889999999999988899
Q ss_pred EEEEEeccCCHHHHHHHHHHHHHHHhhhhc
Q 011801 400 WFRVCFANMDDDTLQVALNRIAAFVQQDKE 429 (477)
Q Consensus 400 ~~Rl~~~~~~~e~l~~~l~~l~~~~~~~~~ 429 (477)
||||||+.+++++++++++||++++++++.
T Consensus 411 ~fRi~fa~~~~~~l~~gl~Ri~~~l~~~~~ 440 (447)
T PLN02607 411 WFRVCFANMSEDTLEVALKRIHRFMDRRKT 440 (447)
T ss_pred EEEEEeccCCHHHHHHHHHHHHHHHHHHHh
Confidence 999999987899999999999999987554
No 4
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=2.4e-71 Score=576.01 Aligned_cols=450 Identities=58% Similarity=1.052 Sum_probs=388.2
Q ss_pred CccccchhhccCCCCCCccchhhhhhcCCCCCCCCCCccccccccccccccHHHHHHHHHhCCCCccccccccccccccc
Q 011801 1 MGILSKIATNNGHGEDSAYFDGWKAFDRNPFHPTQNPGGVIQLGLAENQLCFDLIKDWITKNPYASICTAEGVEVFKDIA 80 (477)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~n~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (477)
|..||..+++..++++.+||+||.+|..++|++..||.|+|+|+.+||+++.+.+.++++.+++...+...+......+.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~p~g~i~L~~~En~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 80 (468)
T PLN02450 1 MKLLSRKATCNSHGQDSSYFLGWEEYEKNPYDEIKNPSGIIQMGLAENQLSFDLIESWLAKNPDAAGLKRNGQSIFRELA 80 (468)
T ss_pred CcccchhhcccccCCCCchHHHHHHHhcCCCCcccCCCeeEEeehhHhHhhHHHHHHHHHhCchhhhcccccccchhhhh
Confidence 77899999999999999999999999999999999999999999999999999999999887553222211112223567
Q ss_pred ccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEE
Q 011801 81 IFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQI 160 (477)
Q Consensus 81 ~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~ 160 (477)
.|+++.|.++||++||+|+++.++.++.+++++|++|+|+++++..++.++++|||.|++++|+|+.|...+....|+++
T Consensus 81 ~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~ 160 (468)
T PLN02450 81 LFQDYHGLPAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEI 160 (468)
T ss_pred cCCCCCChHHHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhhcCCcEE
Confidence 79999999999999999999888877778999999999999999999999999999999999999999888875449999
Q ss_pred EEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCC
Q 011801 161 VPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSS 240 (477)
Q Consensus 161 ~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~ 240 (477)
++++++.+++|.+++++++++++++.+.+.++|+|++||||||||.+++.+++++|+++|++++++||+||+|+++.|++
T Consensus 161 v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~ 240 (468)
T PLN02450 161 VPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDS 240 (468)
T ss_pred EEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCC
Confidence 99999877889999999999998766666789999999999999999999999999999999999999999999988887
Q ss_pred CCcccHHHhhhhccC----CCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhcccCCCchHHHHHHHHhcCChh
Q 011801 241 PKFTSVAEVIQEMDC----NRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDE 316 (477)
Q Consensus 241 ~~~~s~~~~~~~~~~----~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~~~~~vs~~~q~~~~~~L~~~~ 316 (477)
+.+.++.....+..+ ..+++++++||||+||+||+|+||++++++.+.....+...++.+|+++|.++..+|++++
T Consensus 241 ~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~ 320 (468)
T PLN02450 241 PGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVVSAATKMSSFGLVSSQTQYLLSALLSDKK 320 (468)
T ss_pred CCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHHHHHHHHhhcCCCCHHHHHHHHHHhCCch
Confidence 667776655421100 2578999999999999999999999998877766666666666689999999999999988
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCC
Q 011801 317 FVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCT 396 (477)
Q Consensus 317 ~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~ 396 (477)
+.+.++++.+++++++++.+.+.|++.|+.+.++++|+|+|++++..++...++.+.+++..++++.||.|.||+.|++.
T Consensus 321 ~~~~~l~~~~~~l~~rr~~l~~~L~~~gi~~~~~~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~ 400 (468)
T PLN02450 321 FTKNYLEENQKRLKQRQKKLVSGLEAAGIKCLKSNAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHCT 400 (468)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCCC
Confidence 76668899999999999999999999999998999999999999876665566777789999999899999999999887
Q ss_pred CCCEEEEEeccCCHHHHHHHHHHHHHHHhhhhc-----Cc--------cccccccccceeeeccccccc
Q 011801 397 EPGWFRVCFANMDDDTLQVALNRIAAFVQQDKE-----SE--------KPTKKRWQQNLRVSFSSRIYE 452 (477)
Q Consensus 397 ~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~~~~-----~~--------~~~~~~~~~~~~~~~~~~~~~ 452 (477)
+++||||||+..+++++++++++|++++.+... .. ++...+| ..||+|.+|..|
T Consensus 401 ~~g~~Rl~f~~~~~~~l~~~l~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 467 (468)
T PLN02450 401 EPGWFRVCFANMSEETLDLAMKRLKSFVESDSGRRINKSSHQRLKNLRRKTVSKW--VFRLSFHDREPE 467 (468)
T ss_pred CCCEEEEEecCCCHHHHHHHHHHHHHHHHhccccccccchhcccccccchhhhcc--ceEEeeccCCcC
Confidence 889999999977899999999999999965331 10 1115678 588998887544
No 5
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-57 Score=459.33 Aligned_cols=355 Identities=27% Similarity=0.495 Sum_probs=308.3
Q ss_pred cccccccccccccc-HHHHHHHHHhCCCCccccccccccccccc-ccCCCCCcHHHHHHHHHHHhcccCCCCccCCCc-E
Q 011801 38 GGVIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIA-IFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDR-I 114 (477)
Q Consensus 38 ~~~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~-i 114 (477)
.++|+|+++++.++ ++.+.+++.+... ... .|.+..|.++||++||+++.+.+| +.+++++ |
T Consensus 28 ~~vi~l~iG~Pd~~~p~~i~~a~~~a~~-------------~~~~~Y~~~~G~~~LReaia~~~~~~~~--~~~~~~~ei 92 (393)
T COG0436 28 EDVIDLSIGEPDFPTPEHIIEAAIEALE-------------EGGTHYTPSAGIPELREAIAEKYKRRYG--LDVDPEEEI 92 (393)
T ss_pred CCEEEeCCCCCCCCCCHHHHHHHHHHHh-------------cccCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCeE
Confidence 67999999998775 4556666555321 111 677999999999999999999887 6678877 9
Q ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCC-CCcccCHHHHHHHHHHHHHhCCCee
Q 011801 115 VMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDIS-NNFKITREALEAAYERAQEASINIK 193 (477)
Q Consensus 115 ~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~-~~f~i~~~~l~~~~~~~~~~~~~~k 193 (477)
++|+|+++|+..++.++++|||.|++++|+|+.|...+... |.++++++++.. ++|.+|+++|++++.+ ++|
T Consensus 93 ivt~Ga~~al~~~~~a~~~pGDeVlip~P~Y~~y~~~~~~~-gg~~v~v~l~~~~~~f~~d~~~l~~~i~~------ktk 165 (393)
T COG0436 93 IVTAGAKEALFLAFLALLNPGDEVLIPDPGYPSYEAAVKLA-GGKPVPVPLDEEENGFKPDLEDLEAAITP------KTK 165 (393)
T ss_pred EEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHHhc-CCEEEEEeCCcCccCCcCCHHHHHhhcCc------cce
Confidence 99999999999999999999999999999999999999987 999999998655 5999999999999875 899
Q ss_pred EEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCC
Q 011801 194 GLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLP 273 (477)
Q Consensus 194 ~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~ 273 (477)
+|+++|||||||.+++++++++|+++|++|+++||+||+|.+++|++..+.|+.++.. ..++++.++||||.++|+
T Consensus 166 ~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~----~~~~~i~i~s~SK~~~mt 241 (393)
T COG0436 166 AIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAG----ARDRTITINSFSKTYGMT 241 (393)
T ss_pred EEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCC----CcceEEEEeccccccccc
Confidence 9999999999999999999999999999999999999999999999876788877643 358899999999999999
Q ss_pred CceEEEEEeCCHHHHHHHHHhccc--CCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEec-
Q 011801 274 GFRVGIVYSFNDTVVNCGRKMSSF--GLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLK- 349 (477)
Q Consensus 274 G~RvG~i~~~~~~i~~~~~~~~~~--~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~- 349 (477)
|||+||++++++.+.+.+.+.... ...+.+.|.++..+|+..+. ...++..++.+++||+.+.+.|.+. |+.+..
T Consensus 242 GwRvG~~v~~~~~l~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~-~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~ 320 (393)
T COG0436 242 GWRIGWVVGPPEELIAALRKLKSYLTSCAPTPAQYAAIAALNGPQS-DEVVEEMREEYRERRDLLVEALNEIGGLSVVKP 320 (393)
T ss_pred ccceeEeecChHHHHHHHHHHHHhcccCCCHHHHHHHHHHhcCccc-hHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccC
Confidence 999999999866666666544332 34778999999999998743 4557777789999999999999988 599888
Q ss_pred CCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCC-CCCEEEEEeccCCHHHHHHHHHHHHHHHhh
Q 011801 350 SNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCT-EPGWFRVCFANMDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 350 ~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~-~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~ 426 (477)
++|++|+|++++.. .+..+++..++++.||.|.||+.|+.. +.++||++++. +++++++++++|.++++.
T Consensus 321 p~Ga~Y~~~~i~~~------~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~-~~~~l~~a~~rl~~~~~~ 391 (393)
T COG0436 321 PEGAFYLFPKIPEL------LDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLAT-SEETLEEALRRLARFLAE 391 (393)
T ss_pred CCeeEEEEeecCCC------CCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEec-CHHHHHHHHHHHHHHHHh
Confidence 88999999999965 223479999999999999999999985 78999999997 669999999999999876
No 6
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=1.9e-52 Score=427.06 Aligned_cols=354 Identities=21% Similarity=0.347 Sum_probs=286.5
Q ss_pred Ccccccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCC-cE
Q 011801 37 PGGVIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPD-RI 114 (477)
Q Consensus 37 ~~~~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~-~i 114 (477)
+.++|+|+.+++.++ ++.+.+.+.+.... .....|++..|.++||++||+|+.+.+| +.++++ +|
T Consensus 29 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~Y~~~~G~~~lr~aia~~~~~~~g--~~~~~~~~I 95 (388)
T PRK07366 29 GKELIDLSLGSSDLPAPAHALEAIAQSLHD-----------PSTHGYLLFHGTLDFREAAAQWYEQRFG--LAVDPETEV 95 (388)
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHhC-----------cccCCCCCCCCCHHHHHHHHHHHHHhhC--CcCCCcCeE
Confidence 456899999999886 45566666542110 1235799889999999999999987776 557898 69
Q ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeE
Q 011801 115 VMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKG 194 (477)
Q Consensus 115 ~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~ 194 (477)
++|+|+++|+.++++++++|||.|++++|+|+.|...++.. |+++++++++.+++|.+|++++++.+.+ ++|+
T Consensus 96 ~it~Gs~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~k~ 168 (388)
T PRK07366 96 LPLIGSQEGTAHLPLAVLNPGDFALLLDPGYPSHAGGVYLA-GGQIYPMPLRAENDFLPVFADIPTEVLA------QARL 168 (388)
T ss_pred EECCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhc-CCEEEEEECCCccCCCCCHHHHHHhhcc------cceE
Confidence 99999999999999999999999999999999999988877 9999999998777889999998876643 6889
Q ss_pred EEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCC-cccHHHhhhhccCCCCcEEEEecCCcccCCC
Q 011801 195 LIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPK-FTSVAEVIQEMDCNRDLIHIIYSLSKDMGLP 273 (477)
Q Consensus 195 vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~-~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~ 273 (477)
|+++|||||||.+++.+++++|+++|++++++||+||+|.++.|++.. ..++..... ..+++++++||||.||+|
T Consensus 169 i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~----~~~~vi~~~SfSK~~g~~ 244 (388)
T PRK07366 169 MVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADP----EKSVSIEFFTLSKSYNMG 244 (388)
T ss_pred EEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCC----CcccEEEEeecccccCCc
Confidence 999999999999999999999999999999999999999998886643 455555432 335789999999999999
Q ss_pred CceEEEEEeCCHHHHHHHHHhccc---CCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecC
Q 011801 274 GFRVGIVYSFNDTVVNCGRKMSSF---GLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKS 350 (477)
Q Consensus 274 G~RvG~i~~~~~~i~~~~~~~~~~---~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~ 350 (477)
|+|+||++++++ +.+.+.+.... +..+.+.|.+++.+..+ ++++++.++.++++++.+.+.|++.|+.+..+
T Consensus 245 GlRiG~~v~~~~-li~~l~~~~~~~~~~~~~~~~~~a~~~l~~~----~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~p 319 (388)
T PRK07366 245 GFRIGFAIGNAQ-LIQALRQVKAVVDFNQYRGILNGAIAALTGP----QATVQQTVQIFRQRRDAFINALHQIGWPVPLP 319 (388)
T ss_pred chhheehcCCHH-HHHHHHHHHhhcccCCCHHHHHHHHHHHhCc----HHHHHHHHHHHHHHHHHHHHHHHHCCCcccCC
Confidence 999999998555 44444444332 22233445555555443 35678889999999999999999999887778
Q ss_pred CceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHH
Q 011801 351 NAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFV 424 (477)
Q Consensus 351 ~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~ 424 (477)
++|+|+|++++..... +..+++..++++.||.|.||+.|+...++|+||+|+. +++++++++++|++++
T Consensus 320 ~~g~f~~~~~~~~~~~----~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~~l~rl~~~l 388 (388)
T PRK07366 320 EATMYVWAKLPEPWQG----NSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALVH-DPDILEEAVERIAAFL 388 (388)
T ss_pred CeeEEEEEECCcccCC----CHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEecC-CHHHHHHHHHHHHHhC
Confidence 9999999999853211 1235777888888999999999976567899999985 7999999999999864
No 7
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-51 Score=421.56 Aligned_cols=365 Identities=20% Similarity=0.346 Sum_probs=292.1
Q ss_pred Ccccccccccccccc--HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCC-c
Q 011801 37 PGGVIQLGLAENQLC--FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPD-R 113 (477)
Q Consensus 37 ~~~~i~l~~~~n~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~-~ 113 (477)
+.++++|+.+..... ...++...+.... .....|++..|.++||+++|+|+.+.+| +.++++ +
T Consensus 32 ~~~~~~l~~g~p~~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~G~~~lR~~ia~~l~~~~~--~~~~~~~~ 97 (403)
T PRK08636 32 GEDIIDFSMGNPDGPTPQHIIDKLCESAQK------------PKTHGYSVSKGIYKLRLAICNWYKRKYN--VDLDPETE 97 (403)
T ss_pred CCCEEEcCCcCCCCCCCHHHHHHHHHHhcC------------CccCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCe
Confidence 556789988754432 2234333332110 1346899999999999999999987766 557787 7
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHh-CCCe
Q 011801 114 IVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEA-SINI 192 (477)
Q Consensus 114 i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~-~~~~ 192 (477)
|++|+|+++|+.+++++|++|||.|++++|+|+.+...++.. |+++++++++.+++|++|++++.+.+++..++ ..++
T Consensus 98 I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~ 176 (403)
T PRK08636 98 VVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPIHSQAFILA-GGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKP 176 (403)
T ss_pred EEECCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhc-CCEEEEEeccccccCccChhhhhhHHHHHHhhccCCc
Confidence 999999999999999999999999999999999999888877 99999999865567899988776555543322 3578
Q ss_pred eEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCC
Q 011801 193 KGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGL 272 (477)
Q Consensus 193 k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~ 272 (477)
++++++|||||||.+++.+++++|+++|++|+++||+||+|+++.|++..+.++..+.. ..+++++++||||.+|+
T Consensus 177 ~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~----~~~~~i~~~S~SK~~~~ 252 (403)
T PRK08636 177 KYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEG----AKDVAVESYTLSKSYNM 252 (403)
T ss_pred eEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCC----ccccEEEEEecccccCC
Confidence 99999999999999999999999999999999999999999998887655556555422 34678889999999999
Q ss_pred CCceEEEEEeCCHHHHHHHHHhcc--cCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecC
Q 011801 273 PGFRVGIVYSFNDTVVNCGRKMSS--FGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKS 350 (477)
Q Consensus 273 ~G~RvG~i~~~~~~i~~~~~~~~~--~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~ 350 (477)
||+|+||++++++.+ ..+.+... ...++++.|.++..+++.. +.++++.++.++++++.+.+.|++.|+.+..+
T Consensus 253 ~GlRiG~iv~~~~li-~~~~~~~~~~~~~~~~~~q~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p 328 (403)
T PRK08636 253 AGWRVGFVVGNKKLV-GALKKIKSWLDYGMFTPIQVAATIALDGD---QSCVEEIRETYRKRRDVLIESFANAGWELQKP 328 (403)
T ss_pred ccceeeeeeCCHHHH-HHHHHHHHHhcccCChHHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHHHHHHHCCCcccCC
Confidence 999999999866544 44433332 2346678888887777543 45688888999999999999999989888889
Q ss_pred CceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhhhh
Q 011801 351 NAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQQDK 428 (477)
Q Consensus 351 ~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~~~ 428 (477)
++|+|+|++++..... ..+.+++..++++.||.|.||..|+..+++|+||+|+ .+++++++++++|++++++++
T Consensus 329 ~~g~~~~~~l~~~~~~---~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~-~~~~~l~~~~~rl~~~l~~~~ 402 (403)
T PRK08636 329 RASMFVWAKIPEPARH---LGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALI-ENENRIRQAARNIKKFLKELE 402 (403)
T ss_pred CcceEEEEECCCccCC---CCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEec-CCHHHHHHHHHHHHHHHHhhc
Confidence 9999999999854321 1134677888888899999999998766789999998 589999999999999997643
No 8
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-51 Score=422.78 Aligned_cols=350 Identities=22% Similarity=0.359 Sum_probs=290.9
Q ss_pred Ccccccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCC-CcE
Q 011801 37 PGGVIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDP-DRI 114 (477)
Q Consensus 37 ~~~~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~-~~i 114 (477)
..++|+|+.+++.++ ++.+.+.+.+.... .....|+ ..|.++||++||+|+++.+| +.+++ ++|
T Consensus 31 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~-----------~~~~~y~-~~G~~~lr~aia~~~~~~~g--~~~~~~~~I 96 (399)
T PRK07681 31 GHKMIDLSIGNPDMPPADFVREEMVHTANQ-----------KESYGYT-LSGIQEFHEAVTEYYNNTHN--VILNADKEV 96 (399)
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHhc-----------cccCCCC-CCCcHHHHHHHHHHHHHHhC--CCCCCCCeE
Confidence 446899999988764 45566665542110 0122354 37999999999999998777 55788 899
Q ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeE
Q 011801 115 VMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKG 194 (477)
Q Consensus 115 ~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~ 194 (477)
++|+|+++++.+++.+++++||.|++++|+|+.|...++.. |+++++++++.+++|.+|++++++++.+ ++|+
T Consensus 97 ~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~-G~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~k~ 169 (399)
T PRK07681 97 LLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYETGIQMA-GATSYYMPLKKENDFLPDLELIPEEIAD------KAKM 169 (399)
T ss_pred EECCCcHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhc-CCEEEEEecCCCCCCcCCHHHHHHhccc------cceE
Confidence 99999999999999999999999999999999999988877 9999999998777899999999888753 7899
Q ss_pred EEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCC
Q 011801 195 LIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPG 274 (477)
Q Consensus 195 vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G 274 (477)
|+++|||||||.+++.+++++|+++|+++|++||+||+|.++.|++..+.++.++.. ..+++++++||||.||+||
T Consensus 170 v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~----~~~~~i~~~S~SK~~~~~G 245 (399)
T PRK07681 170 MILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPG----AKEVGVEINSLSKSYSLAG 245 (399)
T ss_pred EEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCC----CcccEEEEeecccccCCcc
Confidence 999999999999999999999999999999999999999998887665566555432 3468999999999999999
Q ss_pred ceEEEEEeCCHHHHHHHHHhc--ccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCc
Q 011801 275 FRVGIVYSFNDTVVNCGRKMS--SFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNA 352 (477)
Q Consensus 275 ~RvG~i~~~~~~i~~~~~~~~--~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~ 352 (477)
+|+||++++++ +.+.+.+.. ..+.++.+.|.++..+|.+++ .++++.++.++++++.+.+.|++.|+++..+.+
T Consensus 246 lRiG~~i~~~~-l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~---~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p~~ 321 (399)
T PRK07681 246 SRIGYMIGNEE-IVRALTQFKSNTDYGVFLPIQKAACAALRNGA---AFCEKNRGIYQERRDTLVDGFRTFGWNVDKPAG 321 (399)
T ss_pred ceeEEEecCHH-HHHHHHHHHhhcccCCCHHHHHHHHHHHhCcH---HHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCe
Confidence 99999998654 444444332 234588899999999998753 467788889999999999999999998877889
Q ss_pred eEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHH
Q 011801 353 GLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAA 422 (477)
Q Consensus 353 g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~ 422 (477)
|+|+|++++.... ..+++..+++++||.|.||+.|+..+++|+||+|+. +++++++++++|++
T Consensus 322 g~f~~~~l~~~~~------~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~~~~~l~~l~~ 384 (399)
T PRK07681 322 SMFVWAEIPKGWT------SLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALVQ-DEEVLQQAVENIRN 384 (399)
T ss_pred eeEEEEECCCCCC------HHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEecC-CHHHHHHHHHHHHH
Confidence 9999999985322 235788888878999999999986667899999984 78999999999998
No 9
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.6e-51 Score=420.17 Aligned_cols=386 Identities=18% Similarity=0.334 Sum_probs=302.5
Q ss_pred cchhhccCCCCCCc-cchhhhhhcCCCCCCCCCCcccccccccc-ccc-cHHHHHHHHHhCCCCcccccccccccccccc
Q 011801 5 SKIATNNGHGEDSA-YFDGWKAFDRNPFHPTQNPGGVIQLGLAE-NQL-CFDLIKDWITKNPYASICTAEGVEVFKDIAI 81 (477)
Q Consensus 5 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~l~~~~-n~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (477)
.++-|+|..|++.. .-.|.++.-+. ..-|.++|+|+.+. ++. +++.+.+.+.+.-. ......
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~i~l~~g~~~~~~p~~~~~~~~~~~~~-----------~~~~~~ 73 (405)
T PRK06207 9 ARLGTDNAPGQEVRQSAAGLEALLRG----EPLPGRPVDFSHGDVDAHEPTPGAFELFSAGVE-----------RGGVQA 73 (405)
T ss_pred HHhCCCCCCcHHHHhhhhhhhhhhcC----CcCCCCceecCCcCCCCCCCCHHHHHHHHHHHh-----------cCCCcc
Confidence 35567777777643 13445444333 23456789999865 433 33444444433100 012357
Q ss_pred cCCCCCcHHHHHHHHHHHhcccCCCCccCC-CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEE
Q 011801 82 FQDYHGLPEFRQAVAKFMGKGRGGRVTFDP-DRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQI 160 (477)
Q Consensus 82 Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~-~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~ 160 (477)
|++..|.++||++||+++.+.+| +.+++ ++|++|+|+++++..++.+++++||.|++++|+|+.+...++.. |+++
T Consensus 74 Y~~~~G~~~LR~aia~~l~~~~g--~~~~~~~~I~it~Ga~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~-g~~v 150 (405)
T PRK06207 74 YTEYRGDADIRELLAARLAAFTG--APVDAADELIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVEFF-EGEM 150 (405)
T ss_pred CCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHc-CCEE
Confidence 99999999999999999988777 45678 89999999999999999999999999999999999999888877 9999
Q ss_pred EEEecc---CCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccc
Q 011801 161 VPVHCD---ISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATV 237 (477)
Q Consensus 161 ~~v~~~---~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~ 237 (477)
++++++ .+++|.+|+++|++++++ ++++|+++|||||||.+++.+++++|+++|+++|++||+||+|.++.
T Consensus 151 ~~v~~~~~~~~~~~~~d~~~l~~~~~~------~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~ 224 (405)
T PRK06207 151 VPVQLDYLSADKRAGLDLDQLEEAFKA------GVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLL 224 (405)
T ss_pred EEEeccccCcccCCCcCHHHHHHhhhh------cCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccc
Confidence 999986 335789999999998865 68899999999999999999999999999999999999999999988
Q ss_pred cCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhccc--CCCchHHHHHHHHhcCCh
Q 011801 238 FSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSF--GLVSSQTQYLLASMLSDD 315 (477)
Q Consensus 238 ~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~~~--~~vs~~~q~~~~~~L~~~ 315 (477)
|++..+.++..+.. ..+++++++||||.+|+||+|+||++++++ +.+.+.+.... ...+.++|.++..+|+++
T Consensus 225 ~~~~~~~~~~~~~~----~~~~vi~i~SfSK~~~lpGlRiG~ii~~~~-l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~ 299 (405)
T PRK06207 225 YDGTSYTHLRALPI----DPENVITIMGPSKTESLSGYRLGVAFGSPA-IIDRMEKLQAIVSLRAAGYSQAVLRTWFSEP 299 (405)
T ss_pred cCCCCCCchhcCCC----CcCcEEEEecchhhccCcccceEEEEcCHH-HHHHHHHHHhHhccCCCHHHHHHHHHHHhCc
Confidence 87655555544321 458999999999999999999999998654 44444443322 235678999999999764
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCC
Q 011801 316 EFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQ 394 (477)
Q Consensus 316 ~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~ 394 (477)
. .++++..++++++++.+.+.|++. ++.+.++++|+|+|++++.... +..++++.+++++||.|.||+.|+
T Consensus 300 ~---~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~fl~~~l~~~~~-----~~~~~~~~l~~~~gV~v~pG~~F~ 371 (405)
T PRK06207 300 D---GWMKDRIARHQAIRDDLLRVLRGVEGVFVRAPQAGSYLFPRLPRLAV-----SLHDFVKILRLQAGVIVTPGTEFS 371 (405)
T ss_pred H---HHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEeCcccCC-----CHHHHHHHHHHhcCEEEeCchHhC
Confidence 1 234555566777888899999887 7888889999999999985210 123577888777899999999998
Q ss_pred CCCCCEEEEEeccCCHHHHHHHHHHHHHHHhhhh
Q 011801 395 CTEPGWFRVCFANMDDDTLQVALNRIAAFVQQDK 428 (477)
Q Consensus 395 ~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~~~ 428 (477)
...++||||||+. ++++++++++||++++++++
T Consensus 372 ~~~~~~~Ris~~~-~~~~l~~al~rl~~~l~~~~ 404 (405)
T PRK06207 372 PHTADSIRLNFSQ-DHAAAVAAAERIAQLIERYR 404 (405)
T ss_pred CCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHhh
Confidence 7667899999996 88999999999999997643
No 10
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=7e-51 Score=420.20 Aligned_cols=387 Identities=21% Similarity=0.302 Sum_probs=300.0
Q ss_pred CCCCCCccchhhhhhcCCCCCCCCCCccccccccccc---cc-cHHHHHHHHHhCCCCcccccccccccccccccCCCCC
Q 011801 12 GHGEDSAYFDGWKAFDRNPFHPTQNPGGVIQLGLAEN---QL-CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHG 87 (477)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~n---~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G 87 (477)
+.||-...+..|....... .....+++++++++. .+ +++.+.+.+.+.... .....|++..|
T Consensus 9 ~~~~~~~~~~~~~~~~~~~---~~~g~~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~-----------~~~~~Y~~~~G 74 (433)
T PRK06855 9 GAGELTYEIRNIVAVAKKL---EKLGVKITWENIGDPIAKGEKIPDWMKEIVAELVMD-----------DKSYGYCPTKG 74 (433)
T ss_pred CcHHHHHHHHHHHHHHHHH---HhccccccccccCCCcccCCCCCHHHHHHHHHHhhc-----------CCCCCCCCCCC
Confidence 4455555554443333221 122346788888765 23 345555555442110 13457999999
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccC
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDI 167 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~ 167 (477)
.++||+++|+|+.+.+| +.+++++|++|+|+++|+.+++. +++|||.|++++|+|+.|........|+++++++++.
T Consensus 75 ~~~LReaia~~~~~~~g--~~~~~~~I~it~G~~~al~~~~~-l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~ 151 (433)
T PRK06855 75 VLETREFLAELNNKRGG--AQITPDDIIFFNGLGDAIAKIYG-LLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDP 151 (433)
T ss_pred CHHHHHHHHHHHHhccC--CCCCHhHEEEcCcHHHHHHHHHH-hcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEeccc
Confidence 99999999999998776 56789999999999999999985 7899999999999999887543333388999999887
Q ss_pred CCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHH
Q 011801 168 SNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVA 247 (477)
Q Consensus 168 ~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~ 247 (477)
+++|.+|+++|++++++ +.++++++++|||||||.+++.+++++|+++|+++|++||+||+|.++.|++..+.++.
T Consensus 152 ~~~~~~d~~~l~~~~~~----~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~ 227 (433)
T PRK06855 152 ENNWYPDLDDLENKVKY----NPSIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLS 227 (433)
T ss_pred ccCCCCCHHHHHHHHhc----CCCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHH
Confidence 67899999999998863 23678999999999999999999999999999999999999999999888776667777
Q ss_pred HhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCC----HHHHHHHHHh----cccCCCchHHHHHHHHhcCChhhHH
Q 011801 248 EVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFN----DTVVNCGRKM----SSFGLVSSQTQYLLASMLSDDEFVD 319 (477)
Q Consensus 248 ~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~----~~i~~~~~~~----~~~~~vs~~~q~~~~~~L~~~~~~~ 319 (477)
++.. ..++++++||||.+++||+|+||+++++ +.+....+.+ .....+++++|.++..+|.++++ +
T Consensus 228 ~~~~-----~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~~-~ 301 (433)
T PRK06855 228 EVIG-----DVPGIALKGISKELPWPGSRCGWIEVYNADKDEVFKKYINSILNAKMIEVCSTTLPQMAIPRIMSHPEY-K 301 (433)
T ss_pred HHcC-----cCCeEEEecCccccCCCcceEEEEEEeCCchhhHHHHHHHHHHHhhccccCCChHHHHHHHHhhcCCcH-H
Confidence 6642 1367899999999999999999999842 2222222221 12234678999999999998776 7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhC-CCeEecCCceEEEEeeccchhhc------------cC---------chHHHHHHH
Q 011801 320 NFLVETSKRLAKRHHNFTKGLEQV-GINCLKSNAGLFFWMDLRHLLKE------------KT---------LEGEIALWR 377 (477)
Q Consensus 320 ~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~~~~g~~~~~~l~~~~~~------------~~---------~~~e~~l~~ 377 (477)
+++++.++.+++|++.+.+.|++. |+.+.++++|+|+|++++..... .. .....+++.
T Consensus 302 ~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (433)
T PRK06855 302 NYLKERNKRYEKRSNIAYEKLKDVPGLKVNRTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVY 381 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCeeccCCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHH
Confidence 889999999999999999999887 78888899999999999864200 00 001336777
Q ss_pred HHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhh
Q 011801 378 TIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 378 ~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~ 426 (477)
.++++.||.+.||+.|+.. ..++||||+..+++++++++++|++++++
T Consensus 382 ~l~~~~gV~v~PG~~F~~~-~~~~Rls~~~~~~~~i~~~~~~l~~~~~~ 429 (433)
T PRK06855 382 YLLASTGICVVPLSSFCTE-LNGFRVTLLERDEEKFEWIYQTLAEKIEE 429 (433)
T ss_pred HHHHHcCEEEecCCcCCCC-CCceEEEECCCcHHHHHHHHHHHHHHHHH
Confidence 8888899999999999743 34599999987999999999999999875
No 11
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=1e-50 Score=424.31 Aligned_cols=345 Identities=23% Similarity=0.397 Sum_probs=279.7
Q ss_pred ccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhc-CCCCeEEEcCCCccchHHHHhhhCC
Q 011801 79 IAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLA-NPGDAFLVPSPYYAAFDRDLSWRTG 157 (477)
Q Consensus 79 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~-~~Gd~vlv~~P~y~~~~~~~~~~~g 157 (477)
...|++..|.++||++||+|+++.+| +.+++++|++|+|+++++.+++++++ +|||.|++++|+|+.|...++.. |
T Consensus 108 ~~~Y~~~~G~~~LR~aia~~~~~~~g--~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~P~y~~y~~~~~~~-g 184 (481)
T PTZ00377 108 TGAYTDSAGYPFVRKAVAAFIERRDG--VPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIPIPQYPLYSAAITLL-G 184 (481)
T ss_pred ccCcCcccCCHHHHHHHHHHHHHhcC--CCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEECCCCchhHHHHHHHc-C
Confidence 45699999999999999999998776 56789999999999999999999998 79999999999999999998887 9
Q ss_pred cEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccc
Q 011801 158 VQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATV 237 (477)
Q Consensus 158 ~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~ 237 (477)
.++++++++++++|.+|+++|++++.+..+++.++|+|+++|||||||.+++.+++++|+++|++++++||+||+|.+++
T Consensus 185 ~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~ 264 (481)
T PTZ00377 185 GKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENI 264 (481)
T ss_pred CEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhc
Confidence 99999999877889999999999997655555689999999999999999999999999999999999999999999988
Q ss_pred cCC-CCcccHHHhhhhccCC---CCcEEEEecCCcc-cCCCCceEEEEEe--CCHHHHHHHHHhc-ccCCCchHHHHHHH
Q 011801 238 FSS-PKFTSVAEVIQEMDCN---RDLIHIIYSLSKD-MGLPGFRVGIVYS--FNDTVVNCGRKMS-SFGLVSSQTQYLLA 309 (477)
Q Consensus 238 ~~~-~~~~s~~~~~~~~~~~---~~~viiv~SlSK~-~g~~G~RvG~i~~--~~~~i~~~~~~~~-~~~~vs~~~q~~~~ 309 (477)
|++ ..+.++.....+.+.. ..++++++||||. +|+||+|+||+++ .++.+.+.+.+.. ....++.++|.++.
T Consensus 265 ~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li~~l~~~~~~~~~~~~~~Q~a~~ 344 (481)
T PTZ00377 265 YDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQIYKLASINLCSNVVGQLMTG 344 (481)
T ss_pred cCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHHHHHHHHhheecCCChHHHHHHH
Confidence 853 4566765543321101 1368999999997 6999999999987 2455555554443 33457889999999
Q ss_pred HhcCCh-----hh--HHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEecCCceEEEEeecc--chhhc----cCchHHHHH
Q 011801 310 SMLSDD-----EF--VDNFLVETSKRLAKRHHNFTKGLEQV-GINCLKSNAGLFFWMDLR--HLLKE----KTLEGEIAL 375 (477)
Q Consensus 310 ~~L~~~-----~~--~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~~~~g~~~~~~l~--~~~~~----~~~~~e~~l 375 (477)
.+|.+. .+ ..+++++.++.+++|++.+.+.|+++ |+.+..+++|+|+|++++ ..... ..+..+.++
T Consensus 345 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~ 424 (481)
T PTZ00377 345 LMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVSCQPVEGAMYAFPRIELPEKAIQEAKERGLAPDVLY 424 (481)
T ss_pred HHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCeeEEEEeeccCchhhHHHHHhcCCCcHHHH
Confidence 999642 11 12334444556899999999999988 899999999999998764 21110 001123356
Q ss_pred HHHHHHhcCeEEeCCCCCCCC-CCCEEEEEeccCCHHHHHHHHHHHHHHHhhh
Q 011801 376 WRTIVNDVKLNVSPGSSFQCT-EPGWFRVCFANMDDDTLQVALNRIAAFVQQD 427 (477)
Q Consensus 376 ~~~ll~~~gI~v~pg~~f~~~-~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~~ 427 (477)
+..++++.||.|.||+.|+.. ++++||+||+ .+++++++++++|++++++.
T Consensus 425 ~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~-~~~e~l~~~l~rl~~~~~~~ 476 (481)
T PTZ00377 425 CLELLESTGIVVVPGSGFGQKPGTYHFRITIL-PPEEQIEEMVKKIKEFHESF 476 (481)
T ss_pred HHHHHHHcCEEEeCCcccCCCCCCCEEEEEEC-CCHHHHHHHHHHHHHHHHHH
Confidence 778888899999999999853 4569999999 68899999999999998763
No 12
>PLN02187 rooty/superroot1
Probab=100.00 E-value=8.3e-51 Score=421.64 Aligned_cols=362 Identities=19% Similarity=0.338 Sum_probs=289.7
Q ss_pred Cccccccccccccc-----cHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCC
Q 011801 37 PGGVIQLGLAENQL-----CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDP 111 (477)
Q Consensus 37 ~~~~i~l~~~~n~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~ 111 (477)
..++|+|+.++... +++.+.+.+.+.-. . .....|++..|.++||++||+|+++.++ +.++|
T Consensus 65 ~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~------~-----~~~~~Y~~~~G~~~lR~aiA~~~~~~~~--~~~~~ 131 (462)
T PLN02187 65 NKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLR------S-----GKGNSYGPGAGILPARRAVADYMNRDLP--HKLTP 131 (462)
T ss_pred CCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHh------C-----CCCCCCCCCCChHHHHHHHHHHHHHhcC--CCCCc
Confidence 34789999986542 22334444443211 0 1235798889999999999999987766 45789
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCC
Q 011801 112 DRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASIN 191 (477)
Q Consensus 112 ~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~ 191 (477)
++|++|+|+++|+.+++.++++|||.|++++|+|+.|...++.. |++++.+++.++++|.+|+++|++++++ +
T Consensus 132 ~~I~it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~-g~~~~~~~l~~~~~~~~d~~~l~~~~~~------~ 204 (462)
T PLN02187 132 EDIFLTAGCNQGIEIVFESLARPNANILLPRPGFPHYDARAAYS-GLEVRKFDLLPEKEWEIDLEGIEAIADE------N 204 (462)
T ss_pred ccEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCccHHHHHHHc-CCEEEEEeCccccCCccCHHHHHHhcCC------C
Confidence 99999999999999999999999999999999999998888776 9999999987667899999999987753 6
Q ss_pred eeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccC
Q 011801 192 IKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMG 271 (477)
Q Consensus 192 ~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g 271 (477)
+++++++|||||||.+++.+++++|+++|+++|++||+||+|.+++|++..+.++..+. ...++++++||||.|+
T Consensus 205 ~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~-----~~~~vi~l~SfSK~f~ 279 (462)
T PLN02187 205 TVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFA-----SIVPVLTLAGISKGWV 279 (462)
T ss_pred cEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhc-----cCCcEEEEecchhhcC
Confidence 78999999999999999999999999999999999999999999988776666766553 2246999999999999
Q ss_pred CCCceEEEEEeCCH-HHH---HHHHHhcccC----CCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 011801 272 LPGFRVGIVYSFND-TVV---NCGRKMSSFG----LVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV 343 (477)
Q Consensus 272 ~~G~RvG~i~~~~~-~i~---~~~~~~~~~~----~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~ 343 (477)
+||+|+||++++++ .+. +.+....... .++.+.|.++..+|++.+ +.++++.++.++++++.+.+.|++.
T Consensus 280 ~pGlRiG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~--~~~l~~~~~~l~~~r~~l~~~L~~~ 357 (462)
T PLN02187 280 VPGWKIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKAD--KNFFAKKNKILKHNVDLVCDRLKDI 357 (462)
T ss_pred CccceeEEEEecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCc--HHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 99999999998543 222 2333332222 247899999999997532 4678888999999999999999987
Q ss_pred CC-e-EecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHH
Q 011801 344 GI-N-CLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIA 421 (477)
Q Consensus 344 gi-~-~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~ 421 (477)
+. . +..|++|+|+|++++.... ..+.++.+++..++.+.||.|.||+.|+ .++||||+|+. +++.++++++||+
T Consensus 358 ~~~~~~~~P~gg~fl~~~l~~~~~-~~~~~~~~~~~~ll~~~gV~v~pG~~fg--~~~~iRis~~~-~~e~l~~al~rL~ 433 (462)
T PLN02187 358 PCVVCPKKPESCTYLLTKLELSLM-DNIKDDIDFCVKLAREENLVFLPGDALG--LKNWMRITIGV-EAHMLEDALERLK 433 (462)
T ss_pred CCCcCCCCCCEeEEEEeecChhhC-CCCCCHHHHHHHHHhhCCEEEECccccC--CCCeEEEEeCC-CHHHHHHHHHHHH
Confidence 53 3 2367889999998863211 1111234677888888999999999996 37899999985 7899999999999
Q ss_pred HHHhhhhc
Q 011801 422 AFVQQDKE 429 (477)
Q Consensus 422 ~~~~~~~~ 429 (477)
++++++..
T Consensus 434 ~~l~~~~~ 441 (462)
T PLN02187 434 GFCTRHAK 441 (462)
T ss_pred HHHHHhhh
Confidence 99987654
No 13
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=8.2e-51 Score=415.99 Aligned_cols=351 Identities=22% Similarity=0.327 Sum_probs=285.4
Q ss_pred cccccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCc-cCCC-cE
Q 011801 38 GGVIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVT-FDPD-RI 114 (477)
Q Consensus 38 ~~~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~-~~~~-~i 114 (477)
.++|+|+.++++++ ++.+.+.+.+. +.....|++..|.++||++||+|+.+.+| +. ++++ +|
T Consensus 29 ~~~i~l~~~~p~~~~~~~~~~~~~~~-------------~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g--~~~~~~~~~i 93 (396)
T PRK09147 29 LPPISLSIGEPKHPTPAFIKDALAAN-------------LDGLASYPTTAGLPALREAIAAWLERRYG--LPALDPATQV 93 (396)
T ss_pred CCeEecCCCCCCCCCCHHHHHHHHHH-------------hhhhcCCCCCCCCHHHHHHHHHHHHHHhC--CCcCCccceE
Confidence 46799999998875 45566666553 12456799999999999999999988777 55 6775 89
Q ss_pred EEeCChHHHHHHHHHHhcCC---CCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCC
Q 011801 115 VMGGGATGANELIMFCLANP---GDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASIN 191 (477)
Q Consensus 115 ~~t~G~t~al~~i~~~l~~~---Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~ 191 (477)
++|+|+++++.++++++++| ||.|++++|+|+.|...++.. |++++++|++.+++|.+|++++++++.+ +
T Consensus 94 ~it~G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~-g~~~~~vp~~~~~~~~~d~~~l~~~~~~------~ 166 (396)
T PRK09147 94 LPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEGAALLA-GAEPYFLNCDPANNFAPDFDAVPAEVWA------R 166 (396)
T ss_pred EECCChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchHHHHHhc-CCEEEEeccCccccCccCHHHHHHHHhh------c
Confidence 99999999999999999999 999999999999999888876 9999999998777899999999887754 7
Q ss_pred eeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCC-CcccHHHhhhhcc-CCCCcEEEEecCCcc
Q 011801 192 IKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSP-KFTSVAEVIQEMD-CNRDLIHIIYSLSKD 269 (477)
Q Consensus 192 ~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~-~~~s~~~~~~~~~-~~~~~viiv~SlSK~ 269 (477)
+|++++||||||||.+++.+++++|+++|++++++||+||+|.++.|++. ...+........+ ...+++++++||||.
T Consensus 167 ~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~ 246 (396)
T PRK09147 167 TQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKR 246 (396)
T ss_pred cEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccc
Confidence 89999999999999999999999999999999999999999999877653 2222221111010 024789999999999
Q ss_pred cCCCCceEEEEEeCCHHHHHHHHHhcc--cCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeE
Q 011801 270 MGLPGFRVGIVYSFNDTVVNCGRKMSS--FGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINC 347 (477)
Q Consensus 270 ~g~~G~RvG~i~~~~~~i~~~~~~~~~--~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~ 347 (477)
+|+||+|+||++++++.+ +.+.+... .+.++++.|.++...+.+. .++++.++.++++++.+.+.|.+. +.+
T Consensus 247 ~~~~GlRiG~~~~~~~l~-~~~~~~~~~~~~~~~~~~q~a~~~~~~~~----~~~~~~~~~~~~~~~~~~~~L~~~-~~~ 320 (396)
T PRK09147 247 SNVPGLRSGFVAGDAALL-KKFLLYRTYHGCAMPPAVQAASIAAWNDE----AHVRENRALYREKFDAVTPILAPV-LDV 320 (396)
T ss_pred cCCccceeeeecCCHHHH-HHHHHHhhhcccCCCHHHHHHHHHHhcch----hHHHHHHHHHHHHHHHHHHHHHHh-cCC
Confidence 999999999999966544 43433332 2357888999987777654 357888899999999999999875 666
Q ss_pred ecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCC------CCCCEEEEEeccCCHHHHHHHHHHHH
Q 011801 348 LKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQC------TEPGWFRVCFANMDDDTLQVALNRIA 421 (477)
Q Consensus 348 ~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~------~~~~~~Rl~~~~~~~e~l~~~l~~l~ 421 (477)
..+++|+|+|++++ .. +.+++..+++++||.+.||+.|+. .+.+++||+|+. +++++++++++|+
T Consensus 321 ~~p~~g~f~~~~~~--~~------~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~-~~~~l~~~l~rl~ 391 (396)
T PRK09147 321 QLPDAGFYLWAKVP--GD------DTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVA-PLAECVEAAERIV 391 (396)
T ss_pred CCCCeeEEEEEECC--CC------HHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecC-CHHHHHHHHHHHH
Confidence 77889999999998 11 235788888888999999999863 235799999996 7889999999999
Q ss_pred HHHh
Q 011801 422 AFVQ 425 (477)
Q Consensus 422 ~~~~ 425 (477)
++++
T Consensus 392 ~~~~ 395 (396)
T PRK09147 392 DFCR 395 (396)
T ss_pred HHhc
Confidence 9874
No 14
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=1.3e-50 Score=415.59 Aligned_cols=353 Identities=22% Similarity=0.411 Sum_probs=292.3
Q ss_pred cccccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCC-cEE
Q 011801 38 GGVIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPD-RIV 115 (477)
Q Consensus 38 ~~~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~-~i~ 115 (477)
.++|+|+.+....+ ++.+.+.+.+.-+ +....|++..|.++||+++++++++.+| +.++++ +|+
T Consensus 54 ~~~i~l~~G~P~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~G~~~Lr~aia~~~~~~~g--~~~~~~~~I~ 119 (413)
T PLN00175 54 HGAINLGQGFPNFDGPDFVKEAAIQAIR------------DGKNQYARGFGVPELNSAIAERFKKDTG--LVVDPEKEVT 119 (413)
T ss_pred CCeEecCCCCCCCCCCHHHHHHHHHHHh------------cCCCCcCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCCEE
Confidence 37899999886664 4555665544211 1235799999999999999999998766 557887 799
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEE
Q 011801 116 MGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGL 195 (477)
Q Consensus 116 ~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~v 195 (477)
+|+|+++|+.+++.++++|||.|++++|+|+.+...++.. |+++++++++.+ +|.+|+++|++++.+ ++|+|
T Consensus 120 vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~-g~~~~~v~~~~~-~~~~~~~~l~~~~~~------~~k~i 191 (413)
T PLN00175 120 VTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMA-GAKIKTVTLRPP-DFAVPEDELKAAFTS------KTRAI 191 (413)
T ss_pred EeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHc-CCEEEEEECCcc-cCCCCHHHHHHhcCc------CceEE
Confidence 9999999999999999999999999999999999888877 999999998754 489999999988754 78999
Q ss_pred EEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCc
Q 011801 196 IITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGF 275 (477)
Q Consensus 196 ii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~ 275 (477)
+++|||||||.+++.+++++|+++|++++++||+||+|.++.|++. +.++.++.. ..+++++++||||.||+||+
T Consensus 192 ~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~-~~s~~~~~~----~~~~vi~i~SfSK~~~~~G~ 266 (413)
T PLN00175 192 LINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGD-HISMASLPG----MYERTVTMNSLGKTFSLTGW 266 (413)
T ss_pred EecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCc-ccChhhCCC----CcCcEEEEecchhhccCcch
Confidence 9999999999999999999999999999999999999999888653 456555432 35789999999999999999
Q ss_pred eEEEEEeCCHHHHHHHHHhc--ccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCce
Q 011801 276 RVGIVYSFNDTVVNCGRKMS--SFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAG 353 (477)
Q Consensus 276 RvG~i~~~~~~i~~~~~~~~--~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g 353 (477)
|+||++++++.+.. +.+.. ....++.+.|.++..+|.++ +.++++.++.++++++.+.+.|++.|+.+..+++|
T Consensus 267 RiG~~v~~~~l~~~-l~~~~~~~~~~~s~~~Q~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p~g~ 342 (413)
T PLN00175 267 KIGWAIAPPHLTWG-VRQAHSFLTFATATPMQWAAVAALRAP---ESYYEELKRDYSAKKDILVEGLKEVGFKVYPSSGT 342 (413)
T ss_pred heeeeEeCHHHHHH-HHHHHhhccCCCCHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCee
Confidence 99999996654443 33332 23457889999999999875 34688889999999999999999999999999999
Q ss_pred EEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCC---CCCEEEEEeccCCHHHHHHHHHHHHHHHhh
Q 011801 354 LFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCT---EPGWFRVCFANMDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 354 ~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~---~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~ 426 (477)
+|+|++++.. ....+.+++..+++++||.+.||+.|+.. +++++||+|+. +++++++++++|++++++
T Consensus 343 ~f~~~~~~~~----~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~-~~e~l~~~~~rL~~~~~~ 413 (413)
T PLN00175 343 YFVMVDHTPF----GFENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCK-DEETLRAAVERMKTKLKR 413 (413)
T ss_pred EEEEEecccc----CCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcC-CHHHHHHHHHHHHHHHhC
Confidence 9999998531 11123468888888889999999999642 35799999996 899999999999998763
No 15
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=2.4e-50 Score=413.22 Aligned_cols=361 Identities=22% Similarity=0.362 Sum_probs=289.7
Q ss_pred Ccccccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCC-cE
Q 011801 37 PGGVIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPD-RI 114 (477)
Q Consensus 37 ~~~~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~-~i 114 (477)
..++|+|+.+++.++ ++.+.+.+.+.... .....|++..|.++||+++|+|+++.+| +.++++ +|
T Consensus 29 ~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~-----------~~~~~Y~~~~G~~~lr~aia~~~~~~~g--~~~~~~~~I 95 (405)
T PRK09148 29 GADIIDLGMGNPDLPTPQHIVDKLCETAQD-----------PRTHRYSASKGIPGLRRAQAAYYARRFG--VKLNPDTQV 95 (405)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHcC-----------cccCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCcE
Confidence 456899999987664 33333334332100 1246799999999999999999987666 446787 89
Q ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeE
Q 011801 115 VMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKG 194 (477)
Q Consensus 115 ~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~ 194 (477)
++|+|+++++.+++.+++++||+|++++|+|+.|...+... |+++++++++.+++|. ++++++++.. ..++++
T Consensus 96 ~it~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~-g~~v~~v~~~~~~~~~---~~l~~~~~~~---~~~~~~ 168 (405)
T PRK09148 96 VATLGSKEGFANMAQAITAPGDVILCPNPSYPIHAFGFIMA-GGVIRSVPAEPDEEFF---PALERAVRHS---IPKPIA 168 (405)
T ss_pred EEcCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHhc-CCEEEEEeCCCCCCCc---cCHHHHHhhc---cccceE
Confidence 99999999999999999999999999999999998888876 9999999987655554 3444544321 237889
Q ss_pred EEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCC
Q 011801 195 LIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPG 274 (477)
Q Consensus 195 vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G 274 (477)
|+++|||||||.+++.+++++|+++|++++++||+||+|.++.|++..+.++..+.. ..+++++++||||.+|+||
T Consensus 169 v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~----~~~~~i~~~SfSK~~~~pG 244 (405)
T PRK09148 169 LIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPG----AKDVTVEFTSMSKTFSMAG 244 (405)
T ss_pred EEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCC----ccCcEEEEeccccccCCcc
Confidence 999999999999999999999999999999999999999998787655556554321 3467888999999999999
Q ss_pred ceEEEEEeCCHHHHHHHHHhcc--cCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCc
Q 011801 275 FRVGIVYSFNDTVVNCGRKMSS--FGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNA 352 (477)
Q Consensus 275 ~RvG~i~~~~~~i~~~~~~~~~--~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~ 352 (477)
+|+||++++++ +.+.+.+... ...+++++|.++..+|++. +.++++.++.++++++.+.+.|++.|+.+..+++
T Consensus 245 lR~G~~v~~~~-~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~~---~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~ 320 (405)
T PRK09148 245 WRMGFAVGNER-LIAALTRVKSYLDYGAFTPIQVAATAALNGP---QDCIAEMRELYKKRRDVLVESFGRAGWDIPPPAA 320 (405)
T ss_pred hheeeeeCCHH-HHHHHHHHHHHhccCCChHHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCCe
Confidence 99999999555 4455544433 2347789999999999864 4567888899999999999999999988778899
Q ss_pred eEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhhhhc
Q 011801 353 GLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQQDKE 429 (477)
Q Consensus 353 g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~~~~ 429 (477)
|+|+|++++..... ..+.+++..++++.||.|.||+.|+..+++|+||+++ .+++++.+++++|.+++.++.+
T Consensus 321 g~f~~~~l~~~~~~---~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~-~~~~~l~~al~~l~~~l~~~~~ 393 (405)
T PRK09148 321 SMFAWAPIPEAFRH---LGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALV-ENEQRIRQAARNIKRFLSSADE 393 (405)
T ss_pred eEEEEEECCCccCC---CCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec-CCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999853321 1234688888888899999999997666789999998 5899999999999999987665
No 16
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=1.8e-50 Score=425.92 Aligned_cols=359 Identities=21% Similarity=0.351 Sum_probs=286.2
Q ss_pred ccccccccc-ccccc---HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCc
Q 011801 38 GGVIQLGLA-ENQLC---FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDR 113 (477)
Q Consensus 38 ~~~i~l~~~-~n~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~ 113 (477)
.++|+|+.+ ++++. ++.+.+.+.+. ......|++..|.++||++||+|+.+..+ ..+++++
T Consensus 146 ~~~i~l~~G~p~~~~~~~p~~~~~~~~~~-------------~~~~~~Y~~~~G~~~lReaia~~~~~~~~--~~~~~~~ 210 (517)
T PRK13355 146 THILKLNIGNPAPFGFRTPDEVVYDMAQQ-------------LTDTEGYSDSKGLFSARKAIMQYAQLKGL--PNVDVDD 210 (517)
T ss_pred CCeEEecCcCCCcCCCCCCHHHHHHHHHH-------------hhcCCCCCCCcChHHHHHHHHHHHHhcCC--CCCChhH
Confidence 468999985 34332 33333333332 11234799999999999999999976543 3478999
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCee
Q 011801 114 IVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIK 193 (477)
Q Consensus 114 i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k 193 (477)
|++|+|+++++.+++.+|+++||.|++++|+|+.|...++.. |++++.++++++++|.+|++++++++.. ++|
T Consensus 211 I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~~~-g~~~v~~~~~~~~~~~~d~~~l~~~~~~------~~k 283 (517)
T PRK13355 211 IYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNLA-GGTAVHYRCDEQSEWYPDIDDIRSKITS------RTK 283 (517)
T ss_pred EEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHHHC-CCEEEEeecCcccCCCCCHHHHHHhcCc------Cce
Confidence 999999999999999999999999999999999999888877 9999999998777899999999988754 789
Q ss_pred EEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCC
Q 011801 194 GLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLP 273 (477)
Q Consensus 194 ~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~ 273 (477)
+|+++|||||||.+++.+++++|+++|++|+++||+||+|.+++|++..+.++..+.. ...+++++||||.+++|
T Consensus 284 ~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~-----~~~vi~~~S~SK~~~~~ 358 (517)
T PRK13355 284 AIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAP-----DLFCVTFSGLSKSHMIA 358 (517)
T ss_pred EEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCC-----CCeEEEEecchhhccCc
Confidence 9999999999999999999999999999999999999999998888766677766532 23477789999999999
Q ss_pred CceEEEEEeC-CHH----HHHHHHHhcc-cCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCe
Q 011801 274 GFRVGIVYSF-NDT----VVNCGRKMSS-FGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GIN 346 (477)
Q Consensus 274 G~RvG~i~~~-~~~----i~~~~~~~~~-~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~ 346 (477)
|+|+||++++ +.. +...+..... ...++.++|.++..+|.+.+..+.++.+.+ ++.++++.+.+.|.++ |++
T Consensus 359 G~RiG~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~~-~~~~~r~~l~~~L~~~~g~~ 437 (517)
T PRK13355 359 GYRIGWMILSGNKRIAKDYIEGLNMLANMRLCSNVPAQSIVQTALGGHQSVKDYLVPGG-RVYEQRELVYNALNAIPGIS 437 (517)
T ss_pred ccceEEEEeeCchhhHHHHHHHHHHHhcCcCCcChHHHHHHHHHhcCCccHHHHHHHHH-HHHHHHHHHHHHHhcCCCcc
Confidence 9999999964 222 2222222222 234778999999999976433355666543 4455679999999988 899
Q ss_pred EecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhh
Q 011801 347 CLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 347 ~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~ 426 (477)
+.++++|||+|++++.... .+..+.+++..++.+.||.|.||+.|+...++||||+|+ .+++++++++++|++++++
T Consensus 438 ~~~p~g~fy~~~~l~~~~~--~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~-~~~~~l~~a~~rl~~~~~~ 514 (517)
T PRK13355 438 AVKPKAAFYIFPKIDVKKF--NIHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYL-PRLEDLEDAMDRLADFFSY 514 (517)
T ss_pred cCCCCeeeEEEeecCcccC--CCCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeC-CCHHHHHHHHHHHHHHHHH
Confidence 9999999999999874210 011233577778888899999999998767899999997 5899999999999999976
Q ss_pred h
Q 011801 427 D 427 (477)
Q Consensus 427 ~ 427 (477)
+
T Consensus 515 ~ 515 (517)
T PRK13355 515 Y 515 (517)
T ss_pred h
Confidence 4
No 17
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=2.7e-50 Score=413.40 Aligned_cols=376 Identities=21% Similarity=0.359 Sum_probs=300.4
Q ss_pred hhhhcCCCCCCCCCCcccccccccccc----c-cHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHH
Q 011801 23 WKAFDRNPFHPTQNPGGVIQLGLAENQ----L-CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAK 97 (477)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~i~l~~~~n~----~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 97 (477)
|-.-..+.+....++.++|+|+++++. . +++.+.+.+.+.-. -.....|++..|.++||+++++
T Consensus 16 ~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~Y~~~~G~~~lr~~ia~ 84 (409)
T PLN02656 16 ILSLLMESIDDEENGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQ-----------SNKFNGYAPTVGLPQARRAIAE 84 (409)
T ss_pred HHHHHHHhccccccCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHh-----------cCCCCCCCCCCCCHHHHHHHHH
Confidence 333333344455678899999999885 2 34555665544211 0134579999999999999999
Q ss_pred HHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHH
Q 011801 98 FMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREA 177 (477)
Q Consensus 98 ~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~ 177 (477)
|+++.+| +.+++++|++|+|+++|+.+++.+++++||.|++++|+|+.+...+... |++++.++++.+++|.+|+++
T Consensus 85 ~~~~~~g--~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~i~~~~~~~~~~d~~~ 161 (409)
T PLN02656 85 YLSRDLP--YKLSLDDVFITSGCTQAIDVALSMLARPGANILLPRPGFPIYELCAAFR-HLEVRYVDLLPEKGWEVDLDA 161 (409)
T ss_pred HHHHhcC--CCCCcccEEEeCChHHHHHHHHHHHhCCCCeEEEeCCCCCcHHHHHHHc-CCEEEEEeCCCcCCCCCCHHH
Confidence 9998766 4578999999999999999999999999999999999999998777776 999999998766689999999
Q ss_pred HHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCC
Q 011801 178 LEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNR 257 (477)
Q Consensus 178 l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~ 257 (477)
+++++++ ++++|+++|||||||.+++.+++++|+++|++++++||+||+|.++.|++..+.++..+ . ..
T Consensus 162 l~~~~~~------~~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~-~----~~ 230 (409)
T PLN02656 162 VEALADQ------NTVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVF-G----SI 230 (409)
T ss_pred HHHHhcc------CceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHh-c----cc
Confidence 9988754 67899999999999999999999999999999999999999999988877655665544 2 34
Q ss_pred CcEEEEecCCcccCCCCceEEEEEeCC-------HHHHHHHHHhc-ccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHH
Q 011801 258 DLIHIIYSLSKDMGLPGFRVGIVYSFN-------DTVVNCGRKMS-SFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRL 329 (477)
Q Consensus 258 ~~viiv~SlSK~~g~~G~RvG~i~~~~-------~~i~~~~~~~~-~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l 329 (477)
+++++++||||.|++||+|+||+++++ ..+.+.+.+.. ....++.++|.++..+|++.. +.++++.++++
T Consensus 231 ~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~--~~~~~~~~~~~ 308 (409)
T PLN02656 231 VPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFRDPKIVERIKKYFDILGGPATFIQAAVPTILEQTD--ESFFKKTINIL 308 (409)
T ss_pred CcEEEEcccchhccCcceeEEEEEEeCcccccccHHHHHHHHHHHhhhcCCCHHHHHHHHHHHhcCc--HHHHHHHHHHH
Confidence 679999999999999999999999953 34555444432 234578899999999997532 45688889999
Q ss_pred HHHHHHHHHHHhhCC-Ce-EecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEecc
Q 011801 330 AKRHHNFTKGLEQVG-IN-CLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFAN 407 (477)
Q Consensus 330 ~~r~~~l~~~L~~~g-i~-~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~ 407 (477)
+++++.+.+.|++.+ +. +..+++|+|+|++++..... ....+.+++..++.+.||.+.||+.|+. ++||||||+.
T Consensus 309 ~~~r~~~~~~L~~~~~~~~~~~p~gg~~~w~~l~~~~~~-~~~~~~~~~~~~l~~~gV~v~pg~~fg~--~~~iRi~~~~ 385 (409)
T PLN02656 309 KQSSDICCDRIKEIPCITCPHKPEGSMAVMVKLNLSLLE-DISDDIDFCFKLAREESVIILPGTAVGL--KNWLRITFAA 385 (409)
T ss_pred HHHHHHHHHHHhhCCCCcCCcCCCeEEEEEEecchhhcC-CCCCHHHHHHHHHHhCCEEEecchhcCC--CCeEEEEeCC
Confidence 999999999998873 33 34788999999999742111 1111234666777788999999999963 6899999995
Q ss_pred CCHHHHHHHHHHHHHHHhhhhc
Q 011801 408 MDDDTLQVALNRIAAFVQQDKE 429 (477)
Q Consensus 408 ~~~e~l~~~l~~l~~~~~~~~~ 429 (477)
+++++++++++|++++.++..
T Consensus 386 -~~e~l~eal~rl~~~~~~~~~ 406 (409)
T PLN02656 386 -DPSSLEEALGRIKSFYLRHSK 406 (409)
T ss_pred -CHHHHHHHHHHHHHHHHHhcc
Confidence 899999999999999986543
No 18
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=7.7e-51 Score=413.78 Aligned_cols=354 Identities=24% Similarity=0.445 Sum_probs=291.8
Q ss_pred ccccccccccccccH-HHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCC-cEE
Q 011801 38 GGVIQLGLAENQLCF-DLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPD-RIV 115 (477)
Q Consensus 38 ~~~i~l~~~~n~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~-~i~ 115 (477)
.++|+|+.+++.+++ +.+.+.+.+... .....|++..|.++||+++|+|+++.+| +.++++ +|+
T Consensus 20 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~~~i~ 85 (378)
T PRK07682 20 EGVISLGVGEPDFVTPWNVREASIRSLE------------QGYTSYTANAGLLELRQEIAKYLKKRFA--VSYDPNDEII 85 (378)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCCCCCcEE
Confidence 578999999988753 334444433210 1245698888999999999999998776 456775 799
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEE
Q 011801 116 MGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGL 195 (477)
Q Consensus 116 ~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~v 195 (477)
+|+|+++|+.+++.++++|||.|++++|+|+.|...++.. |.++++++++.+++|.+|++++++++.+ ++++|
T Consensus 86 ~t~G~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~v 158 (378)
T PRK07682 86 VTVGASQALDVAMRAIINPGDEVLIVEPSFVSYAPLVTLA-GGVPVPVATTLENEFKVQPAQIEAAITA------KTKAI 158 (378)
T ss_pred EeCChHHHHHHHHHHhCCCCCEEEEeCCCchhhHHHHHHc-CCEEEEeecCCccCCCCCHHHHHhhcCc------ccEEE
Confidence 9999999999999999999999999999999998888876 9999999987666789999999998754 78999
Q ss_pred EEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCc
Q 011801 196 IITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGF 275 (477)
Q Consensus 196 ii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~ 275 (477)
+++|||||||.+++.+++++|+++|+++++++|+||+|.++.|+++ +.++..+.. ..+++++++||||.||+||+
T Consensus 159 ~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~----~~~~~i~~~S~SK~~~~~Gl 233 (378)
T PRK07682 159 LLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEA-YTSFASIKG----MRERTILISGFSKGFAMTGW 233 (378)
T ss_pred EEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCC-CCChhhccc----ccCCEEEEecCcccccChhh
Confidence 9999999999999999999999999999999999999999888653 345444432 34689999999999999999
Q ss_pred eEEEEEeCCHHHHHHHHHhc--ccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCce
Q 011801 276 RVGIVYSFNDTVVNCGRKMS--SFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAG 353 (477)
Q Consensus 276 RvG~i~~~~~~i~~~~~~~~--~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g 353 (477)
|+||++++++ +.+.+.+.. ..+.++.++|.++..+|++++ .++++.++.++++++.+.+.|++.|+.+..+++|
T Consensus 234 R~G~~~~~~~-~i~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p~g~ 309 (378)
T PRK07682 234 RLGFIAAPVY-FSEAMLKIHQYSMMCAPTMAQFAALEALRAGN---DDVIRMRDSYRKRRNFFVTSFNEIGLTCHVPGGA 309 (378)
T ss_pred hhhhhhcCHH-HHHHHHHHHHhhccCCCHHHHHHHHHHHhCCh---HHHHHHHHHHHHHHHHHHHHHHHCCCccCCCCee
Confidence 9999999665 444443332 234478899999999998753 2477788899999999999999999988889999
Q ss_pred EEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhhh
Q 011801 354 LFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQQD 427 (477)
Q Consensus 354 ~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~~ 427 (477)
+|+|++++... . ...++++.+++++||.+.||..|+..+++|+|||++. +++++++++++|++++++.
T Consensus 310 ~~~~~~~~~~~----~-~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~l~~~ 377 (378)
T PRK07682 310 FYAFPSISSTG----L-SSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYAT-SLEQLQEAMKRMKRFVENK 377 (378)
T ss_pred EEEEEeccCCC----C-CHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeCC-CHHHHHHHHHHHHHHHhhc
Confidence 99999886311 1 1235778888778999999999976667899999996 7899999999999998763
No 19
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=2.9e-50 Score=412.94 Aligned_cols=362 Identities=20% Similarity=0.357 Sum_probs=287.5
Q ss_pred Ccccccccccccc----c-cHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCC
Q 011801 37 PGGVIQLGLAENQ----L-CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDP 111 (477)
Q Consensus 37 ~~~~i~l~~~~n~----~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~ 111 (477)
..++|+|+.++.. + +++.+.+.+.+.-+. .....|++..|.++||++||+|+.+.+| +.+++
T Consensus 31 ~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~-----------~~~~~Y~~~~G~~~lr~aia~~~~~~~g--~~~~~ 97 (409)
T PLN00143 31 HRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRS-----------AKFNSYAPTGGILPARRAIADYLSNDLP--YQLSP 97 (409)
T ss_pred CCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhC-----------cCCCCCCCCCCCHHHHHHHHHHHHhhcC--CCCCH
Confidence 4568999998875 3 445565655442110 1235698889999999999999988766 55789
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCC
Q 011801 112 DRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASIN 191 (477)
Q Consensus 112 ~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~ 191 (477)
++|++|+|+++++.+++.+++++||.|++++|+|+.|...++.. |++++.++++.+++|.+|+++|++++++ +
T Consensus 98 ~~I~it~G~~~al~~~~~~l~~~gd~v~v~~P~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~ 170 (409)
T PLN00143 98 DDVYLTLGCKHAAEIIIKVLARPEANILLPRPGFPDVETYAIFH-HLEIRHFDLLPEKGWEVDLDAVEAIADE------N 170 (409)
T ss_pred hhEEEecChHHHHHHHHHHHcCCCCEEEEcCCCCcCHHHHHHHc-CCEEEEEeccCCCCCcCCHHHHHHhccc------C
Confidence 99999999999999999999999999999999999999888877 9999999986567899999999887753 6
Q ss_pred eeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccC
Q 011801 192 IKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMG 271 (477)
Q Consensus 192 ~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g 271 (477)
++.++++|||||||.+++.+++++|+++|++++++||+||+|.++.|++..+.++..+. ..+++++++||||.|+
T Consensus 171 ~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~-----~~~~vi~~~SfSK~f~ 245 (409)
T PLN00143 171 TIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFA-----SIVPVITLGSISKRWM 245 (409)
T ss_pred CEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhc-----ccCcEEEEccchhhcC
Confidence 88999999999999999999999999999999999999999999888765555554432 3468999999999999
Q ss_pred CCCceEEEEEeC-CHHH------HHHHHHhcc-cCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 011801 272 LPGFRVGIVYSF-NDTV------VNCGRKMSS-FGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV 343 (477)
Q Consensus 272 ~~G~RvG~i~~~-~~~i------~~~~~~~~~-~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~ 343 (477)
+||+|+||++++ ++.+ ...+.+... ...++.++|.++..+|.+.. +.++++.+++++++++.+.+.|.++
T Consensus 246 ~pGlRvG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~L~~~ 323 (409)
T PLN00143 246 IPGWGLGWLVTCDPSGLLQICEIADSIKKALNPAPFPPTFIQAAIPEILEKTT--EDFFSKTINILRAALAFCYDKLKEI 323 (409)
T ss_pred CCccceEEEEeeCchhhhhhHHHHHHHHHHHhccCCCCchHHHHHHHHHhcCh--HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999984 3322 222222221 22357799999999997632 3456777788888888899999887
Q ss_pred CC-eE-ecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHH
Q 011801 344 GI-NC-LKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIA 421 (477)
Q Consensus 344 gi-~~-~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~ 421 (477)
+. .+ ..+++|+|+|++++..... ....+.+++..++.+.||.+.||+.|+. ++|+||+|+. ++++++++++||+
T Consensus 324 ~~~~~~~~p~gg~f~w~~l~~~~~~-~~~~~~~~~~~ll~~~gV~v~pg~~f~~--~~~iRi~~~~-~~~~l~~al~rl~ 399 (409)
T PLN00143 324 PCIMCPQKAEGAFFALVKLNLLLLE-DIEDDMEFCLKLAKEESLIILPGVTVGL--KNWLRITFAV-EQSSLEDGLGRLK 399 (409)
T ss_pred CCCCCCCCCCeeEEEEEecchhhcC-CCCCHHHHHHHHHHhCCEEEeCccccCC--CCeEEEEEcC-CHHHHHHHHHHHH
Confidence 43 32 3578999999999852111 1112346777788888999999999963 7899999994 7899999999999
Q ss_pred HHHhhhhc
Q 011801 422 AFVQQDKE 429 (477)
Q Consensus 422 ~~~~~~~~ 429 (477)
++++++..
T Consensus 400 ~~l~~~~~ 407 (409)
T PLN00143 400 SFCGRHAK 407 (409)
T ss_pred HHHHHhcc
Confidence 99986543
No 20
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=1.4e-50 Score=413.23 Aligned_cols=352 Identities=22% Similarity=0.353 Sum_probs=285.2
Q ss_pred Ccccccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCC-cE
Q 011801 37 PGGVIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPD-RI 114 (477)
Q Consensus 37 ~~~~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~-~i 114 (477)
..++|+|+.+....+ ++.+.+.+.+.-.. .....|++..|.++||+++|+|+++.+| +.++++ +|
T Consensus 31 ~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~-----------~~~~~Y~~~~g~~~lr~aia~~~~~~~g--~~~~~~~~i 97 (389)
T PRK08068 31 GHDVINLGQGNPDQPTPEHIVEALQEAAEN-----------PANHKYSPFRGYPFLKEAAADFYKREYG--VTLDPETEV 97 (389)
T ss_pred CCCeEEecCCCCCCCCCHHHHHHHHHHHhC-----------CCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCccE
Confidence 346799998865553 34555555542110 1245798889999999999999987766 457788 89
Q ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeE
Q 011801 115 VMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKG 194 (477)
Q Consensus 115 ~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~ 194 (477)
++|+|+++++..++.+++++||.|++++|+|+.|...++.. |+++++++++.+++|.+|++++++++.+ ++++
T Consensus 98 ~it~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~-g~~~~~i~~~~~~~~~~d~~~l~~~~~~------~~~~ 170 (389)
T PRK08068 98 AILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYLSGVALA-RAQFETMPLIAENNFLPDYTKIPEEVAE------KAKL 170 (389)
T ss_pred EEcCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhc-CCEEEEeecccccCCCCCHHHHHHhccc------cceE
Confidence 99999999999999999999999999999999999888877 9999999998667899999999988753 7899
Q ss_pred EEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCC
Q 011801 195 LIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPG 274 (477)
Q Consensus 195 vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G 274 (477)
|+++|||||||.+++.+++++|+++|++++++||+||+|.++.|++....+...... ..+++++++||||.||+||
T Consensus 171 v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~----~~~~~i~~~S~SK~~g~~G 246 (389)
T PRK08068 171 MYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPG----AKDVGIELYTLSKTFNMAG 246 (389)
T ss_pred EEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCC----ccCCEEEEecchhccCCcc
Confidence 999999999999999999999999999999999999999988776544445443322 3467899999999999999
Q ss_pred ceEEEEEeCCHHHHHHHHHhcccC--CCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCc
Q 011801 275 FRVGIVYSFNDTVVNCGRKMSSFG--LVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNA 352 (477)
Q Consensus 275 ~RvG~i~~~~~~i~~~~~~~~~~~--~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~ 352 (477)
+|+||++++++ +.+.+.+..... ..++..|.++..++.+. .+++++.+++++++++.+.+.|++.|+.+.++.+
T Consensus 247 lRiG~~~~~~~-l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~r~~~~~~L~~~g~~~~~~~g 322 (389)
T PRK08068 247 WRVAFAVGNES-VIEAINLLQDHLFVSLFGAIQDAAIEALLSD---QSCVAELVARYESRRNAFISACREIGWEVDAPKG 322 (389)
T ss_pred ceeEeEecCHH-HHHHHHHHHhhccCCCChHHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCe
Confidence 99999998554 444444433322 23456788877777653 2457888899999999999999999998888999
Q ss_pred eEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHH
Q 011801 353 GLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAF 423 (477)
Q Consensus 353 g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~ 423 (477)
|+|+|++++...+ ..++++.+++++||.|.||+.|+..+++|+||+++. +++.+.+++++|+++
T Consensus 323 ~~~~~v~~~~~~~------~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~al~~l~~~ 386 (389)
T PRK08068 323 SFFAWMPVPKGYT------SEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLLT-DEERLREAVERIGKL 386 (389)
T ss_pred eEEEEEECCCCCC------HHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEcC-CHHHHHHHHHHHHHh
Confidence 9999999985322 235788888778999999999987667899999985 788999999998764
No 21
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=3.4e-50 Score=410.99 Aligned_cols=352 Identities=21% Similarity=0.338 Sum_probs=284.5
Q ss_pred cccccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCC-cEE
Q 011801 38 GGVIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPD-RIV 115 (477)
Q Consensus 38 ~~~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~-~i~ 115 (477)
.++|+|+.+++++. ++.+.+.+++.. .....|++..|.++||+++|+|+.+.+|....++++ +|+
T Consensus 28 ~~~i~l~~~~p~~~~~~~~~~a~~~~~-------------~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~ 94 (393)
T TIGR03538 28 KPPIALSIGEPKHPTPAFVLEALRENL-------------HGLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVL 94 (393)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHh-------------hccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEE
Confidence 46799999998875 456666666531 235679999999999999999998877643336785 899
Q ss_pred EeCChHHHHHHHHHHhcCCCCe--EEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCee
Q 011801 116 MGGGATGANELIMFCLANPGDA--FLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIK 193 (477)
Q Consensus 116 ~t~G~t~al~~i~~~l~~~Gd~--vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k 193 (477)
+|+|+++++.++++++++|||. |++++|+|+.|...++.. |+++++++++++++|.+|.+++++++.+ ++|
T Consensus 95 it~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~k 167 (393)
T TIGR03538 95 PVNGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEGAALLA-GAEPYFLNCTAENGFLPDFDAVPESVWR------RCQ 167 (393)
T ss_pred ECCCcHHHHHHHHHHHcCCCCcceEEecCCCCcchHHHHHhc-CCeEEEeeccccCCCCCCHHHHHHHHhh------cce
Confidence 9999999999999999999986 999999999999888776 9999999998777899999999988754 789
Q ss_pred EEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCC-CcccHHHhhhhcc-CCCCcEEEEecCCcccC
Q 011801 194 GLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSP-KFTSVAEVIQEMD-CNRDLIHIIYSLSKDMG 271 (477)
Q Consensus 194 ~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~-~~~s~~~~~~~~~-~~~~~viiv~SlSK~~g 271 (477)
+|+++|||||||.+++.+++++|+++|+++|++||+||+|.++.+++. .+.+........+ ...+++++++||||.++
T Consensus 168 ~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~ 247 (393)
T TIGR03538 168 LLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSN 247 (393)
T ss_pred EEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcC
Confidence 999999999999999999999999999999999999999998777632 2333322211111 02478999999999999
Q ss_pred CCCceEEEEEeCCHHHHHHHHHhcc--cCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEec
Q 011801 272 LPGFRVGIVYSFNDTVVNCGRKMSS--FGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLK 349 (477)
Q Consensus 272 ~~G~RvG~i~~~~~~i~~~~~~~~~--~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~ 349 (477)
+||+|+||++++++.+ +.+.+... ...++++.|.++...+.+. +++++.++.++++++.+.+.|.+. +.+..
T Consensus 248 ~~GlRvG~~i~~~~l~-~~~~~~~~~~~~~~~~~~q~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~ 321 (393)
T TIGR03538 248 LPGLRSGFVAGDAEIL-KAFLRYRTYHGCAMPIPTQLASIAAWNDE----QHVRENRALYREKFAAVLEILGQV-LDLEL 321 (393)
T ss_pred CcccceEEEecCHHHH-HHHHHHHHhhccCcCHHHHHHHHHHhcCh----HHHHHHHHHHHHHHHHHHHHHHhh-CcccC
Confidence 9999999999966544 33333332 2347888999988888653 457788889999999999999875 55667
Q ss_pred CCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCC------CCCCEEEEEeccCCHHHHHHHHHHHHHH
Q 011801 350 SNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQC------TEPGWFRVCFANMDDDTLQVALNRIAAF 423 (477)
Q Consensus 350 ~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~------~~~~~~Rl~~~~~~~e~l~~~l~~l~~~ 423 (477)
+++|+|+|++++ . ++.++++.+++++||.|.||+.|+. .+++++||+|+. +++++++++++|+++
T Consensus 322 p~gg~f~~~~~~--~------~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~-~~~~l~~~l~~l~~~ 392 (393)
T TIGR03538 322 PDAGFYLWPKVP--G------DDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVA-PLEECVEAAERIRSF 392 (393)
T ss_pred CCeeEEEEEECC--C------CHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecC-CHHHHHHHHHHHHHh
Confidence 899999999998 1 1235788888888999999999862 235799999986 789999999999886
Q ss_pred H
Q 011801 424 V 424 (477)
Q Consensus 424 ~ 424 (477)
+
T Consensus 393 ~ 393 (393)
T TIGR03538 393 I 393 (393)
T ss_pred C
Confidence 3
No 22
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=2.2e-50 Score=411.21 Aligned_cols=350 Identities=25% Similarity=0.381 Sum_probs=288.2
Q ss_pred cccccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCC-cEE
Q 011801 38 GGVIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPD-RIV 115 (477)
Q Consensus 38 ~~~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~-~i~ 115 (477)
.++++|+.+++.+. ++.+.+.+.+.... .....|+++.|.++||+++|+|+++.+| +.++++ +|+
T Consensus 29 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~Y~~~~G~~~lr~~ia~~~~~~~~--~~~~~~~~vi 95 (383)
T TIGR03540 29 VDVISLGIGDPDLPTPKHIVEALCKAAEN-----------PENHRYPSYEGMLAYRQAVADWYKRRFG--VELDPETEVL 95 (383)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhC-----------CCCCCCCCCCCCHHHHHHHHHHHHHhhC--CCCCCCCeEE
Confidence 36799999988774 45555555442110 1245799999999999999999987766 446676 699
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEE
Q 011801 116 MGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGL 195 (477)
Q Consensus 116 ~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~v 195 (477)
+|+|+++++..++++++++||.|++++|+|+.+...++.. |+++++++++.+++|.+|++++++++.+ ++++|
T Consensus 96 ~t~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~-G~~v~~v~~~~~~g~~~d~~~l~~~~~~------~~~~v 168 (383)
T TIGR03540 96 SLIGSKEGIAHIPLAFVNPGDIVLVPDPGYPVYRIGTLFA-GGEPYEMPLKEENGFLPDFDAIPEDIAK------KAKLM 168 (383)
T ss_pred ECCCcHHHHHHHHHHhCCCCCEEEEeCCCCcchHHHHHhc-CCEEEEEecCcccCCccCHHHHHhhccc------cceEE
Confidence 9999999999999999999999999999999999888876 9999999998667789999999888753 78999
Q ss_pred EEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCc
Q 011801 196 IITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGF 275 (477)
Q Consensus 196 ii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~ 275 (477)
+++|||||||.+++.+++++|+++|+++|++||+||+|.++.|++....++..+.. ..+++++++||||.||+||+
T Consensus 169 ~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~----~~~~~i~~~SfSK~~g~~Gl 244 (383)
T TIGR03540 169 FINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDG----AKDVGIEFHSLSKTYNMTGW 244 (383)
T ss_pred EEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCC----cccCEEEEEecccccCCccc
Confidence 99999999999999999999999999999999999999988886655555554421 23678999999999999999
Q ss_pred eEEEEEeCCHHHHHHHHHhcc--cCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCce
Q 011801 276 RVGIVYSFNDTVVNCGRKMSS--FGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAG 353 (477)
Q Consensus 276 RvG~i~~~~~~i~~~~~~~~~--~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g 353 (477)
|+||++++++.+ +.+..... ...++.+.|.++..+|.+. ++++++.++.++++++.+.+.|++.|+.+.++++|
T Consensus 245 RiG~~i~~~~l~-~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~ 320 (383)
T TIGR03540 245 RIGMAVGNADLI-AGLGKVKTNVDSGVFQAIQYAAIAALNGP---QDVVKEIRKIYQRRRDLLLEALKKIGIDVEKPKAT 320 (383)
T ss_pred eeeEEeCCHHHH-HHHHHHHHhcccCCChHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCCcc
Confidence 999999865544 43333222 2346778999999999874 45678888999999999999999999999889999
Q ss_pred EEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHH
Q 011801 354 LFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAA 422 (477)
Q Consensus 354 ~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~ 422 (477)
+|+|++++...+ ..+++..+++++||.|.||+.|+..+++++||+|+ .+++++++++++|++
T Consensus 321 ~~~~~~l~~~~~------~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~-~~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 321 FYVWVPVPEGYT------SAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLT-VPDERLEEAVARIKK 382 (383)
T ss_pred eEEEEECCCCCC------HHHHHHHHHHHCCEEEecchhhCccCCCeEEEEec-CCHHHHHHHHHHHhh
Confidence 999999985322 23578888888899999999997655789999998 478999999999875
No 23
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=5.5e-50 Score=412.71 Aligned_cols=362 Identities=20% Similarity=0.373 Sum_probs=293.0
Q ss_pred Cccccccccccccc-----cHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCC
Q 011801 37 PGGVIQLGLAENQL-----CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDP 111 (477)
Q Consensus 37 ~~~~i~l~~~~n~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~ 111 (477)
...+|+|+.++... .++.+.+.+.+.-. ......|++..|++++|+++|+++++.++ +.+++
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~-----------~~~~~~Y~~~~G~~~lr~aia~~~~~~~~--~~~~~ 117 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALR-----------SGKYNSYSTCVGLLPARRAIAEYLSRDLP--YELST 117 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHH-----------cCcCCCCCCCccCHHHHHHHHHHHhhccC--CCCCh
Confidence 34699999997642 23445555443210 01234799989999999999999987766 55789
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCC
Q 011801 112 DRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASIN 191 (477)
Q Consensus 112 ~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~ 191 (477)
++|++|+|+++|+.+++.+|.+|||.|++++|+|+.|...+... |++++.+++.++++|.+|++++++++.+ +
T Consensus 118 ~~v~it~G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~ 190 (430)
T PLN00145 118 DDIYLTAGCAQAIEIIMSVLAQPGANILLPRPGYPLYEARAVFS-GLEVRHFDLLPERGWEVDLEGVEALADE------N 190 (430)
T ss_pred hhEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHc-CCEEEEeeCCcccCCcCCHHHHHHHhCc------C
Confidence 99999999999999999999999999999999999998877776 9999999987677899999999987754 7
Q ss_pred eeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccC
Q 011801 192 IKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMG 271 (477)
Q Consensus 192 ~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g 271 (477)
+++++++|||||||.+++.+++++|+++|+++|++||+||+|.++.|++..+.++..+. ..+++++++||||.|+
T Consensus 191 ~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~-----~~~~vi~~~S~SK~~~ 265 (430)
T PLN00145 191 TVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFG-----EVAPVLTLGSISKRWV 265 (430)
T ss_pred ceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhc-----ccCcEEEEeccccccC
Confidence 88999999999999999999999999999999999999999999888776666765542 3468999999999999
Q ss_pred CCCceEEEEEeC-CHHHH------HHHHHhcccC-CCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 011801 272 LPGFRVGIVYSF-NDTVV------NCGRKMSSFG-LVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV 343 (477)
Q Consensus 272 ~~G~RvG~i~~~-~~~i~------~~~~~~~~~~-~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~ 343 (477)
+||+|+||++++ ++.+. ..++.....+ ..+++.|.++..+|.+.. +.++++.++.++++++.+.+.|++.
T Consensus 266 ~pG~RlG~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~L~~~ 343 (430)
T PLN00145 266 VPGWRLGWIATCDPNGILKETKVVDSIRNYLNISTDPATFVQGAIPQIIANTK--EEFFTKTLGLLKETADICYEKIKEI 343 (430)
T ss_pred CCCeeEEEEEEecchhhhhhhHHHHHHHHHhcccCCCCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999974 22222 2233333222 356799999999998642 5678888999999999999999987
Q ss_pred -CCeEe-cCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHH
Q 011801 344 -GINCL-KSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIA 421 (477)
Q Consensus 344 -gi~~~-~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~ 421 (477)
|+.+. .|++|+|+|++++...-. .+.++.+++..++++.||.+.||+.|+. ++|+||+|+. +++++++++++|+
T Consensus 344 ~g~~~~~~P~ga~y~~v~l~~~~~~-~~~~~~~~~~~ll~~~gV~v~pG~~fg~--~~~lRis~~~-~~~~l~~al~rl~ 419 (430)
T PLN00145 344 KCITCPHKPEGSMFVMVKLDLSCLS-GIKDDMDFCCKLAKEESVVVLPGSALGM--KNWLRITFAI-DPPSLEDGLERLK 419 (430)
T ss_pred CCCCCCcCCCeeeEEEeccChhhcC-CCCCHHHHHHHHHHhCCEEEeCccccCC--CCeEEEEeCC-CHHHHHHHHHHHH
Confidence 77764 689999999999742100 1112346888899999999999999974 6899999995 8999999999999
Q ss_pred HHHhhhhc
Q 011801 422 AFVQQDKE 429 (477)
Q Consensus 422 ~~~~~~~~ 429 (477)
+++.+++.
T Consensus 420 ~~~~~~~~ 427 (430)
T PLN00145 420 SFCLRHAK 427 (430)
T ss_pred HHHHHhcc
Confidence 99987654
No 24
>PLN02231 alanine transaminase
Probab=100.00 E-value=1.6e-49 Score=416.48 Aligned_cols=343 Identities=22% Similarity=0.411 Sum_probs=278.5
Q ss_pred ccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhc-CCCCeEEEcCCCccchHHHHhhhCC
Q 011801 79 IAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLA-NPGDAFLVPSPYYAAFDRDLSWRTG 157 (477)
Q Consensus 79 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~-~~Gd~vlv~~P~y~~~~~~~~~~~g 157 (477)
...|++..|.++||++||+|+.+.+| +.+++++|++|+|+++|+.+++++|+ .+||.|+++.|+|+.|...++.. |
T Consensus 161 ~~~Y~~s~G~~~lReaIA~~~~~r~g--~~~~pe~I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~~~~~~-g 237 (534)
T PLN02231 161 TGAYSHSQGIKGLRDAIAAGIEARDG--FPADPNDIFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYPLYSASIALH-G 237 (534)
T ss_pred ccCcCCCCCcHHHHHHHHHHHHhccC--CCCCcccEEEeCCHHHHHHHHHHHhccCCCCEEEEeCCCChhHHHHHHHc-C
Confidence 45699999999999999999988766 66889999999999999999999998 48999999999999999988877 9
Q ss_pred cEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccc
Q 011801 158 VQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATV 237 (477)
Q Consensus 158 ~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~ 237 (477)
.++++++++++++|.+|+++|++++++....+.++|+|+++|||||||.+++.+++++|+++|+++|++||+||+|.+++
T Consensus 238 ~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~ 317 (534)
T PLN02231 238 GTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENV 317 (534)
T ss_pred CEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcc
Confidence 99999999877789999999999998765556689999999999999999999999999999999999999999999998
Q ss_pred cC-CCCcccHHHhhhhccC--CCCcEEEEecCCccc-CCCCceEEEEEeC--CHHHHHHHHHhcccC-CCchHHHHHHHH
Q 011801 238 FS-SPKFTSVAEVIQEMDC--NRDLIHIIYSLSKDM-GLPGFRVGIVYSF--NDTVVNCGRKMSSFG-LVSSQTQYLLAS 310 (477)
Q Consensus 238 ~~-~~~~~s~~~~~~~~~~--~~~~viiv~SlSK~~-g~~G~RvG~i~~~--~~~i~~~~~~~~~~~-~vs~~~q~~~~~ 310 (477)
|+ +..+.++..+..+.+. ...++++++||||.+ |+||+|+||++++ ++.+.+.+.+..... ..+...|.++..
T Consensus 318 y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l~~~l~k~~~~~~~s~~~~Q~~~~~ 397 (534)
T PLN02231 318 YVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDVREQIYKVASVNLCSNISGQILASL 397 (534)
T ss_pred cCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEecCCHHHHHHHHHHHhhhcCCChHHHHHHHH
Confidence 95 4566777766432111 123689999999975 8999999999874 455666554443332 245578888888
Q ss_pred hcCC-----hhhHHHHHH---HHHHHHHHHHHHHHHHHhhC-CCeEecCCceEEEEeec--cch-hhcc---CchHHHHH
Q 011801 311 MLSD-----DEFVDNFLV---ETSKRLAKRHHNFTKGLEQV-GINCLKSNAGLFFWMDL--RHL-LKEK---TLEGEIAL 375 (477)
Q Consensus 311 ~L~~-----~~~~~~~~~---~~~~~l~~r~~~l~~~L~~~-gi~~~~~~~g~~~~~~l--~~~-~~~~---~~~~e~~l 375 (477)
+++. ..+ +.+++ +.++.+++|++.+.+.|+++ |+.|.+++||+|+|+++ +.. .... ....+..+
T Consensus 398 ~l~~p~~~~~~y-~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~~~~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~ 476 (534)
T PLN02231 398 VMSPPKPGDESY-ESYMAEKDGILSSLARRAKTLEDALNSLEGVTCNKAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFY 476 (534)
T ss_pred HhCCCCCCcchH-HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeeEEeccccCcHHHHHHHhhcCCCcHHHH
Confidence 8864 233 44443 45788999999999999998 89999999999999655 321 1100 00112346
Q ss_pred HHHHHHhcCeEEeCCCCCCCC-CCCEEEEEeccCCHHHHHHHHHHHHHHHhh
Q 011801 376 WRTIVNDVKLNVSPGSSFQCT-EPGWFRVCFANMDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 376 ~~~ll~~~gI~v~pg~~f~~~-~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~ 426 (477)
+..++++.||.+.||+.|+.. +..+||++|+ .++++++++++||++++++
T Consensus 477 ~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~~-~~~e~l~eal~RL~~~~~~ 527 (534)
T PLN02231 477 CKRLLNATGIVVVPGSGFGQVPGTWHFRCTIL-PQEDKIPAIVSRLTEFHKS 527 (534)
T ss_pred HHHHHHhcCEEEeCCcccCCCCCCCeEEEEeC-CCHHHHHHHHHHHHHHHHH
Confidence 777888899999999999853 3457999996 4899999999999998865
No 25
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.5e-50 Score=408.82 Aligned_cols=347 Identities=20% Similarity=0.382 Sum_probs=286.8
Q ss_pred cccccccccccccH-HH-HHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEE
Q 011801 39 GVIQLGLAENQLCF-DL-IKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVM 116 (477)
Q Consensus 39 ~~i~l~~~~n~~~~-~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~ 116 (477)
++|+|+.+++.+++ +. +++.+.... .....|++..|.++||+++|+|+.+.+| +.+++++|++
T Consensus 30 ~~i~l~~g~p~~~~~~~~~~~~~~~~~-------------~~~~~Y~~~~G~~~lr~~ia~~~~~~~~--~~~~~~~i~i 94 (384)
T PRK06348 30 DIIDLSLGDPDLITDESIINAAFEDAK-------------KGHTRYTDSGGDVELIEEIIKYYSKNYD--LSFKRNEIMA 94 (384)
T ss_pred CcEEcCCCCCCCCCCHHHHHHHHHHHh-------------cCCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCChhhEEE
Confidence 57999999888753 32 333333211 1346799999999999999999987766 5578999999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEE
Q 011801 117 GGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLI 196 (477)
Q Consensus 117 t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vi 196 (477)
|+|+++|+.+++.+++++||.|++++|+|+.+...++.. |.++++++++..++|.+|+++|+++++. ++++|+
T Consensus 95 t~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~v~ 167 (384)
T PRK06348 95 TVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQIEMV-GGKPIILETYEEDGFQINVKKLEALITS------KTKAII 167 (384)
T ss_pred cCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHc-CCEEEEecCCcCcCCcCCHHHHHHhhCc------CccEEE
Confidence 999999999999999999999999999999999998887 9999999986556889999999988753 788999
Q ss_pred EeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCce
Q 011801 197 ITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFR 276 (477)
Q Consensus 197 i~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~R 276 (477)
+++||||||.+++.+++++|+++|++++++||+||+|.++.|+. .+.++..+.. ..+++++++||||.+|+||+|
T Consensus 168 l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~----~~~~vi~~~SfSK~~~l~GlR 242 (384)
T PRK06348 168 LNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYE-DFVPMATLAG----MPERTITFGSFSKDFAMTGWR 242 (384)
T ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCC-CccchhhcCC----CcCcEEEEecchhccCCcccc
Confidence 99999999999999999999999999999999999999987764 3345444421 257899999999999999999
Q ss_pred EEEEEeCCHHHHHHHHHhcc--cCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEecCCce
Q 011801 277 VGIVYSFNDTVVNCGRKMSS--FGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLKSNAG 353 (477)
Q Consensus 277 vG~i~~~~~~i~~~~~~~~~--~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~~~~g 353 (477)
+||++++++ +...+..... ...++++.|.++..+|.+. ++++++.++.++++++.+.+.|++. ++.+.++++|
T Consensus 243 iG~~v~~~~-~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg 318 (384)
T PRK06348 243 IGYVIAPDY-IIETAKIINEGICFSAPTISQRAAIYALKHR---DTIVPLIKEEFQKRLEYAYKRIESIPNLSLHPPKGS 318 (384)
T ss_pred ceeeecCHH-HHHHHHHHHHhccCCCCHHHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCee
Confidence 999999655 4444443322 2347889999999999753 4567788889999999999999887 7788889999
Q ss_pred EEEEeeccc-hhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHH
Q 011801 354 LFFWMDLRH-LLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAF 423 (477)
Q Consensus 354 ~~~~~~l~~-~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~ 423 (477)
+|+|++++. ... ..+++..++++.||.|.||+.|+..+++++|||++ .+++++++++++|+++
T Consensus 319 ~~~~~~~~~~~~~------~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~-~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 319 IYAFINIKKTGLS------SVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACT-VGIEVLEEAFNRIEKM 382 (384)
T ss_pred EEEEEecccCCCC------HHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEec-CCHHHHHHHHHHHHhh
Confidence 999999973 221 23577888888899999999998666789999998 4899999999999864
No 26
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=7.6e-50 Score=410.61 Aligned_cols=365 Identities=21% Similarity=0.383 Sum_probs=296.3
Q ss_pred CCCcccccccccccc-----ccHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccC----C
Q 011801 35 QNPGGVIQLGLAENQ-----LCFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRG----G 105 (477)
Q Consensus 35 ~~~~~~i~l~~~~n~-----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g----~ 105 (477)
.+..++|+|+.+... .+++.+.+.+.+.-.. .....|++..|.++||++||+|+++.++ .
T Consensus 30 ~~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~-----------~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~ 98 (412)
T PTZ00433 30 PSPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDS-----------QECNGYPPTVGSPEAREAVATYWRNSFVHKESL 98 (412)
T ss_pred CCCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhc-----------CCCCCCCCCCCcHHHHHHHHHHHHhhccccccc
Confidence 356689999998754 3556666666553110 1346799999999999999999987532 1
Q ss_pred CCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHH
Q 011801 106 RVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERA 185 (477)
Q Consensus 106 ~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~ 185 (477)
++.+++++|++|+|+++++.+++.+++++||.|+++.|+|+.+...++.. |++++.++++.+++|.+|++++++++++
T Consensus 99 ~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~-g~~~~~i~~~~~~~~~~d~~~l~~~~~~- 176 (412)
T PTZ00433 99 KSTIKKDNVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAY-GIEMRFYNCRPEKDWEADLDEIRRLVDD- 176 (412)
T ss_pred cCCCChhhEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHHHc-CCEEEEEecCccccCcCCHHHHHHHhcc-
Confidence 35578999999999999999999999999999999999999999888877 9999999998667899999999887754
Q ss_pred HHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEec
Q 011801 186 QEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYS 265 (477)
Q Consensus 186 ~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~S 265 (477)
++++|+++|||||||.+++.+++++|+++|+++|++||+||+|.++.|++..+.++..+.. ..++++++|
T Consensus 177 -----~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-----~~~~i~~~S 246 (412)
T PTZ00433 177 -----RTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDT-----TVPRVILGG 246 (412)
T ss_pred -----CceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccC-----CCceEEEcc
Confidence 7899999999999999999999999999999999999999999998887655556555422 235789999
Q ss_pred CCcccCCCCceEEEEEeCC-----HHHHHHHHHhcc-cCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHH
Q 011801 266 LSKDMGLPGFRVGIVYSFN-----DTVVNCGRKMSS-FGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKG 339 (477)
Q Consensus 266 lSK~~g~~G~RvG~i~~~~-----~~i~~~~~~~~~-~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~ 339 (477)
|||.||+||+|+||+++++ +.+...+++... .+.+++++|.++..++.+. . +.++++.++.++++++.+.+.
T Consensus 247 fSK~~~~pGlRlG~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~-~-~~~~~~~~~~~~~~r~~l~~~ 324 (412)
T PTZ00433 247 TAKNLVVPGWRLGWLLLVDPHGNGGDFLDGMKRLGMLVCGPCSVVQAALGEALLNT-P-QEHLEQIVAKLEEGAMVLYNH 324 (412)
T ss_pred chhhcCCCCeeEEEEEEeCCcccHHHHHHHHHHHhhccCCCChHHHHHHHHHHhcC-c-HHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999721 334444444333 3458999999999999763 2 567888899999999999999
Q ss_pred HhhC-CCeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHH
Q 011801 340 LEQV-GINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALN 418 (477)
Q Consensus 340 L~~~-gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~ 418 (477)
|++. |+.+..+++|+|+|++++...-. ....+.++++.+++++||.|.||+.|+. ++|+||||+. ++++++++++
T Consensus 325 L~~~~~~~~~~p~gg~f~~~~l~~~~~~-~~~~~~~~~~~ll~~~gV~v~pg~~f~~--~~~iRis~~~-~~e~l~~al~ 400 (412)
T PTZ00433 325 IGECIGLSPTMPRGSMFLMSRLDLEKFR-DIKSDVEFYEKLLEEENVQVLPGEIFHM--PGFTRLTISR-PVEVLREAVE 400 (412)
T ss_pred HhcCCCCcccCCCeeEEEEEEechhhcC-CCCCHHHHHHHHHHhcCEEEeCccccCC--CCeEEEEecC-CHHHHHHHHH
Confidence 9885 78888899999999998741100 0112236888888778999999999964 6899999986 6889999999
Q ss_pred HHHHHHhhhh
Q 011801 419 RIAAFVQQDK 428 (477)
Q Consensus 419 ~l~~~~~~~~ 428 (477)
+|++++++++
T Consensus 401 ~l~~~~~~~~ 410 (412)
T PTZ00433 401 RIKAFCERHK 410 (412)
T ss_pred HHHHHHHHhc
Confidence 9999997643
No 27
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=4.2e-50 Score=409.35 Aligned_cols=350 Identities=24% Similarity=0.367 Sum_probs=287.1
Q ss_pred cccccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCC-cEE
Q 011801 38 GGVIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPD-RIV 115 (477)
Q Consensus 38 ~~~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~-~i~ 115 (477)
.++|+|+.+++++. ++.+.+.+.+.-.. .....|++..|+++||+++|+|+++.+| +.++++ +|+
T Consensus 31 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~Y~~~~G~~~lr~aia~~~~~~~g--~~~~~~~~ii 97 (385)
T PRK09276 31 VDVISLGIGDPDLPTPDHIIEAMCKAVED-----------PENHQYPSYEGMLEFRKAVADWYKRRFG--VELDPETEVI 97 (385)
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHhC-----------CCCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCCCCCcEE
Confidence 35799999988774 45556655542110 1245799999999999999999987766 456777 599
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEE
Q 011801 116 MGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGL 195 (477)
Q Consensus 116 ~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~v 195 (477)
+|+|+++++..++.++++|||.|++++|+|+.|...++.. |+++++++++.+++|.+|++++++++.+ ++++|
T Consensus 98 ~t~G~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~~~-g~~~~~v~~~~~~g~~~d~~~l~~~~~~------~~~~v 170 (385)
T PRK09276 98 SLIGSKEGIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFA-GGEPYFMPLKEENGFLPDLDAIPEDVAK------KAKLM 170 (385)
T ss_pred EccCcHHHHHHHHHHhCCCCCEEEEcCCCCcChHHHHHHc-CCEEEEEecCCCCCCcCCHHHHHHhccc------cceEE
Confidence 9999999999999999999999999999999999888877 9999999997666789999999887653 78999
Q ss_pred EEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCc
Q 011801 196 IITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGF 275 (477)
Q Consensus 196 ii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~ 275 (477)
+++|||||||.+++.+++++|+++|+++|++||+||+|.++.|++....++..+.. ..+++++++||||.||+||+
T Consensus 171 ~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~----~~~~~i~~~S~SK~~g~~Gl 246 (385)
T PRK09276 171 FINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPG----AKDVGIEFHSLSKTYNMTGW 246 (385)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCC----CcCCEEEEecchhhcCCcch
Confidence 99999999999999999999999999999999999999988776555555554421 24678999999999999999
Q ss_pred eEEEEEeCCHHHHHHHHHhcc--cCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCce
Q 011801 276 RVGIVYSFNDTVVNCGRKMSS--FGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAG 353 (477)
Q Consensus 276 RvG~i~~~~~~i~~~~~~~~~--~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g 353 (477)
|+||++++++. .+.+.+... ...++.+.|.++..+|.+. +.++++.+++++++++.+.+.|++.|+++..+++|
T Consensus 247 RiG~~i~~~~l-~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 322 (385)
T PRK09276 247 RIGFAVGNADL-IAGLGKVKSNVDSGVFQAIQEAGIAALNGP---QEVVEELRKIYQERRDILVEGLRKLGLEVEPPKAT 322 (385)
T ss_pred hheeeeCCHHH-HHHHHHHHhhccCCCCHHHHHHHHHHHcCc---HHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcc
Confidence 99999986554 444433322 2235668899999999753 45678888999999999999999999988888999
Q ss_pred EEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHH
Q 011801 354 LFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAA 422 (477)
Q Consensus 354 ~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~ 422 (477)
+|+|++++...+ ..++++.+++++||.|.||..|+..+++|+||+|+. +++++.+++++|++
T Consensus 323 ~~~~v~~~~~~~------~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~ 384 (385)
T PRK09276 323 FYVWAPVPKGYT------SAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALTV-PDERIEEAVERIKK 384 (385)
T ss_pred eEEEEECCCCCC------HHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeCC-CHHHHHHHHHHHhh
Confidence 999999985432 235788888888999999999986667899999984 88999999999875
No 28
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-49 Score=407.15 Aligned_cols=351 Identities=25% Similarity=0.366 Sum_probs=283.8
Q ss_pred ccccccccccccccH-H-HHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCC-cE
Q 011801 38 GGVIQLGLAENQLCF-D-LIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPD-RI 114 (477)
Q Consensus 38 ~~~i~l~~~~n~~~~-~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~-~i 114 (477)
.++|+|+.+....++ + .++........ .....|++..|.++||+++|+|+++.+| +.++++ +|
T Consensus 35 ~~~i~l~~g~p~~~~p~~~~~~~~~~~~~------------~~~~~Y~~~~G~~~lr~aia~~~~~~~~--~~~~~~~~i 100 (394)
T PRK05942 35 LDLIDLGMGNPDGAAPQPVIEAAIAALAD------------PQNHGYPPFEGTASFRQAITDWYHRRYG--VELDPDSEA 100 (394)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhC------------CCCccCCCCCCCHHHHHHHHHHHHHHHC--CCcCCCCeE
Confidence 457999877433322 2 33333332100 1245799999999999999999987766 557788 48
Q ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeE
Q 011801 115 VMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKG 194 (477)
Q Consensus 115 ~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~ 194 (477)
++|+|+++++..++.++++|||.|++++|+|+.+...+... |+++++++++.+++|.+|++++++++.+ ++|+
T Consensus 101 ~vt~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~k~ 173 (394)
T PRK05942 101 LPLLGSKEGLTHLALAYVNPGDVVLVPSPAYPAHFRGPLIA-GAQIYPIILKPENDWLIDLSSIPEEVAQ------QAKI 173 (394)
T ss_pred EEccChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHc-CCEEEEeecCCccCCccCHHHHHHhccc------cceE
Confidence 99999999999999999999999999999999998877766 9999999998777899999999988754 7899
Q ss_pred EEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCC
Q 011801 195 LIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPG 274 (477)
Q Consensus 195 vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G 274 (477)
|+++|||||||.+++.+++++|+++|+++|++||+||+|.++.+++....++..+.. ..+++++++||||.||+||
T Consensus 174 i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~----~~~~~i~~~SfSK~~~~~G 249 (394)
T PRK05942 174 LYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPG----AKDIGVEFHTLSKTYNMAG 249 (394)
T ss_pred EEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCC----ccccEEEEecchhccCChh
Confidence 999999999999999999999999999999999999999988776655455554421 2456788999999999999
Q ss_pred ceEEEEEeCCHHHHHHHHHhcc--cCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCc
Q 011801 275 FRVGIVYSFNDTVVNCGRKMSS--FGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNA 352 (477)
Q Consensus 275 ~RvG~i~~~~~~i~~~~~~~~~--~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~ 352 (477)
+|+||++++++ +.+.++.... ...+++++|.++..+|+.. ++++++.+++++++++.+.+.|++.|+.+.++++
T Consensus 250 lRiG~i~~~~~-l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~ 325 (394)
T PRK05942 250 WRVGFVVGNRH-IIQGLRTLKTNLDYGIFSALQKAAETALQLP---DSYLQQVQERYRTRRDFLIQGLGELGWNIPPTKA 325 (394)
T ss_pred hheeeeecCHH-HHHHHHHHHhhcccCCCHHHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCe
Confidence 99999998654 5454444332 2347788999999999743 4567888899999999999999998998888999
Q ss_pred eEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHH
Q 011801 353 GLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFV 424 (477)
Q Consensus 353 g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~ 424 (477)
|+|+|++++.... ..+++..+++++||.|.||+.|+..+++|+|||++. +.+.+.+++++|+++-
T Consensus 326 ~~f~~~~~~~~~~------~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~~ 390 (394)
T PRK05942 326 TMYLWVPCPVGMG------STDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLIA-DCDRLGEALDRLKQAG 390 (394)
T ss_pred eeEEEEECCCCCC------HHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEecC-CHHHHHHHHHHHHHhh
Confidence 9999999985322 124667778888999999999976667899999984 6788888888887653
No 29
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-49 Score=407.89 Aligned_cols=355 Identities=20% Similarity=0.287 Sum_probs=288.2
Q ss_pred Ccccccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCc-cCCC-c
Q 011801 37 PGGVIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVT-FDPD-R 113 (477)
Q Consensus 37 ~~~~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~-~~~~-~ 113 (477)
+.++|+|+.+++++. ++.+.+.+.+.-.. .....|++ .|.++||+++|+|+.+.+| +. ++++ +
T Consensus 43 ~~~~i~L~~g~p~~~~~~~~~~~l~~~~~~-----------~~~~~Y~~-~G~~~lr~aia~~~~~~~g--~~~~~~~~~ 108 (410)
T PRK06290 43 DMELIDMGVGEPDEMADESVVEVLCEEAKK-----------PENRGYAD-NGIQEFKEAAARYMEKVFG--VKDIDPVTE 108 (410)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHhC-----------CCCCCCCC-CCcHHHHHHHHHHHHHHcC--CCcCCCcce
Confidence 446899999998875 45555555542100 12346876 7999999999999987766 55 6786 7
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCee
Q 011801 114 IVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIK 193 (477)
Q Consensus 114 i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k 193 (477)
|++|+|+++++..++++++++||.|++++|+|+.|...++.. |+++++++++.+++|.+|++++++++.+ ++|
T Consensus 109 I~it~Gs~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~-g~~v~~v~~~~~~~~~~d~~~l~~~~~~------~~k 181 (410)
T PRK06290 109 VIHSIGSKPALAMLPSCFINPGDVTLMTVPGYPVTGTHTKYY-GGEVYNLPLLEENNFLPDLDSIPKDIKE------KAK 181 (410)
T ss_pred EEEccCHHHHHHHHHHHhCCCCCEEEEeCCCCccHHHHHHHc-CCEEEEEecCCCcCCcCCHHHHHHhhcc------cce
Confidence 999999999999999999999999999999999999888887 9999999998777899999999888754 789
Q ss_pred EEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCC
Q 011801 194 GLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLP 273 (477)
Q Consensus 194 ~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~ 273 (477)
+|+++|||||||.+++.+++++|+++|+++|++||+||+|.++.|++. +.++..+.. ..+++++++||||.+|+|
T Consensus 182 ~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~-~~s~~~~~~----~~~~~I~i~SfSK~~g~~ 256 (410)
T PRK06290 182 LLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGK-PLSFLSVPG----AKEVGVEIHSLSKAYNMT 256 (410)
T ss_pred EEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCC-CcChhcCCC----ccccEEEEeechhhcCCc
Confidence 999999999999999999999999999999999999999998877653 345444422 346789999999999999
Q ss_pred CceEEEEEeCCHHHHHHHHHhccc--CCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCC
Q 011801 274 GFRVGIVYSFNDTVVNCGRKMSSF--GLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSN 351 (477)
Q Consensus 274 G~RvG~i~~~~~~i~~~~~~~~~~--~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~ 351 (477)
|+|+||++++++ +...+.+.... ..++.++|.++..+|+++++ +++.++.++++++.+.+.|++.|+.+.+++
T Consensus 257 GlRiG~ii~~~~-l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~g~~~~~p~ 331 (410)
T PRK06290 257 GWRLAFVVGNEL-IVKAFATVKDNNDSGQFIAIQKAGIYALDHPEI----TEKIREKYSRRLDKLVKILNEVGFKAEMPG 331 (410)
T ss_pred hhheEeEEeCHH-HHHHHHHHHhccccCCcHHHHHHHHHHhhCcHH----HHHHHHHHHHHHHHHHHHHHhCCCeecCCC
Confidence 999999999655 44444443332 23456899999999988654 677788899999999999999999988899
Q ss_pred ceEEEEeeccchhhc-cCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccC--CHHHHHHHHHHHHHHHhh
Q 011801 352 AGLFFWMDLRHLLKE-KTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANM--DDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 352 ~g~~~~~~l~~~~~~-~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~--~~e~l~~~l~~l~~~~~~ 426 (477)
+|+|+|++++..... ....+..++++.++++.+|.+.||+.|+ +|+||+++.. ++++.+++++.|++.+.+
T Consensus 332 g~f~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~~----~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~ 405 (410)
T PRK06290 332 GTFYLYVKAPKGTKSGIKFENAEEFSQYLIKEKLISTVPWDDAG----HFLRFSVTFEAKDEEEEDRILEEIKRRLSD 405 (410)
T ss_pred eeeEEEEECCCccccCCCCCCHHHHHHHHHHhCCEEEECCcccc----CeEEEEEEcccccccchhHHHHHHHHHHhh
Confidence 999999999864311 0112334688889988788888998763 6999999864 789999999999998875
No 30
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=9.2e-50 Score=407.56 Aligned_cols=353 Identities=22% Similarity=0.373 Sum_probs=295.5
Q ss_pred cccccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEE
Q 011801 38 GGVIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVM 116 (477)
Q Consensus 38 ~~~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~ 116 (477)
.++|+|+.+++.++ ++.+.+.+.+... .....|.+..|.++||+++|+++++.+| +.+++++|++
T Consensus 33 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~~i~~ 98 (391)
T PRK08361 33 ENVISLGIGEPDFDTPKNIKEAAKRALD------------EGWTHYTPNAGIPELREAIAEYYKKFYG--VDVDVDNVIV 98 (391)
T ss_pred cCeEEcCCCCCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCCcccEEE
Confidence 46899999998875 4555555554211 1234688888999999999999987666 4578999999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEE
Q 011801 117 GGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLI 196 (477)
Q Consensus 117 t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vi 196 (477)
|+|+++++.+++.+++++||.|++++|+|+.+...+... |+++++++++.+++|.+|++++++++++ ++++|+
T Consensus 99 t~G~~~al~~~~~~l~~~g~~Vlv~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~i~~------~~~~v~ 171 (391)
T PRK08361 99 TAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVEDAKIA-EAKPIRIPLREENEFQPDPDELLELITK------RTRMIV 171 (391)
T ss_pred eCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHHc-CCEEEEEecCCccCCCCCHHHHHHhccc------ccEEEE
Confidence 999999999999999999999999999999999888876 9999999998777899999999998864 688999
Q ss_pred EeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCce
Q 011801 197 ITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFR 276 (477)
Q Consensus 197 i~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~R 276 (477)
++||+||||.+++.+++++|+++|+++++++|+||+|+++.|++....++... ..+++++++||||.+|+||+|
T Consensus 172 i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~------~~~~~i~~~s~SK~~~~~GlR 245 (391)
T PRK08361 172 INYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKY------APDNTILANSFSKTFAMTGWR 245 (391)
T ss_pred EeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhc------CCCCEEEEecCchhcCCcHhh
Confidence 99999999999999999999999999999999999999887765544554443 346899999999999999999
Q ss_pred EEEEEeCCHHHHHHHHHhc--ccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEecCCce
Q 011801 277 VGIVYSFNDTVVNCGRKMS--SFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLKSNAG 353 (477)
Q Consensus 277 vG~i~~~~~~i~~~~~~~~--~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~~~~g 353 (477)
+||++++++.+.. +.+.. ..+.++++.|.++..+|+++++ .+++++.+++++++++.+.+.|++. |+.+..+++|
T Consensus 246 iG~~~~~~~~~~~-~~~~~~~~~~~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~g~ 323 (391)
T PRK08361 246 LGFVIAPEQVIKD-MIKLHAYIIGNVASFVQIAGIEALRSKES-WKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPKGA 323 (391)
T ss_pred hhhhccCHHHHHH-HHHHHhhhccCCChHHHHHHHHHhcCCcc-cHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCEE
Confidence 9999996655443 33332 2355788999999999988765 4578888999999999999999987 8888899999
Q ss_pred EEEEeeccc-hhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhh
Q 011801 354 LFFWMDLRH-LLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 354 ~~~~~~l~~-~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~ 426 (477)
+|+|++++. ..+ ..++...+++++||.|.||+.|+..+++||||+++. +++++++++++|++++++
T Consensus 324 ~~~~~~l~~~~~~------~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~al~~l~~~l~~ 390 (391)
T PRK08361 324 FYVFANIDETGMS------SEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYAT-SKEKLIEAMERMEKALEE 390 (391)
T ss_pred EEEEEECCCCCCC------HHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHhc
Confidence 999999984 111 235777777778999999999987667899999995 788999999999998864
No 31
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=5e-49 Score=401.97 Aligned_cols=358 Identities=22% Similarity=0.422 Sum_probs=293.4
Q ss_pred cccccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCC-CcEE
Q 011801 38 GGVIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDP-DRIV 115 (477)
Q Consensus 38 ~~~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~-~~i~ 115 (477)
.++|+|+.+++++. ++.+.+.+.+... .....|++..|.++||+++++++++.++ +.+++ ++|+
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~g~~~lr~~ia~~~~~~~~--~~~~~~~~i~ 95 (391)
T PRK07309 30 PGILKLTLGEPDFTTPDHVKEAAKRAID------------ANQSHYTGMAGLLELRQAAADFVKEKYN--LDYAPENEIL 95 (391)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCCCCCcEE
Confidence 46899999998875 4556666554211 1234698889999999999999987666 44554 7899
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEE
Q 011801 116 MGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGL 195 (477)
Q Consensus 116 ~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~v 195 (477)
+|+|+++|+.+++.+++++||.|++++|+|+++...++.. |.+++.++++. ++|.+|++++++++++. ..++++|
T Consensus 96 it~G~~~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~-g~~~~~~~~~~-~~~~~d~~~l~~~~~~~---~~~~~~i 170 (391)
T PRK07309 96 VTIGATEALSASLTAILEPGDKVLLPAPAYPGYEPIVNLV-GAEIVEIDTTE-NDFVLTPEMLEKAILEQ---GDKLKAV 170 (391)
T ss_pred EeCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHc-CCEEEEEecCC-cCCcCCHHHHHHHhhcc---CCCeEEE
Confidence 9999999999999999999999999999999999888877 99999999764 56889999999988642 2368999
Q ss_pred EEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCc
Q 011801 196 IITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGF 275 (477)
Q Consensus 196 ii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~ 275 (477)
++++|+||||.+++.+++++|+++|+++|+++|+||+|+++.|++..+.++.+. ..+++++++||||.||+||+
T Consensus 171 ~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~------~~~~~i~~~S~SK~~g~~Gl 244 (391)
T PRK07309 171 ILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEY------LPDQTILINGLSKSHAMTGW 244 (391)
T ss_pred EEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHh------ccCCEEEEecChhhccCccc
Confidence 999999999999999999999999999999999999999988866555666554 34789999999999999999
Q ss_pred eEEEEEeCCHHHHHHHHHhc-ccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceE
Q 011801 276 RVGIVYSFNDTVVNCGRKMS-SFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGL 354 (477)
Q Consensus 276 RvG~i~~~~~~i~~~~~~~~-~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~ 354 (477)
|+||++++++.+........ ....++.++|.++..+|++..+ +....++.++++++.+.+.|++.|+.+..+++|+
T Consensus 245 RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~gg~ 321 (391)
T PRK07309 245 RIGLIFAPAEFTAQLIKSHQYLVTAATTMAQFAAVEALTNGKD---DALPMKKEYIKRRDYIIEKMTDLGFKIIKPDGAF 321 (391)
T ss_pred eeEEEEeCHHHHHHHHHHHhhcccCCChHHHHHHHHHHhCChh---HHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeE
Confidence 99999997665544433221 2235788999999999987643 1345677888999999999999999999999999
Q ss_pred EEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhhhh
Q 011801 355 FFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQQDK 428 (477)
Q Consensus 355 ~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~~~ 428 (477)
|+|++++.... .++.++++.++++.||.|.||+.|+..+++||||+++. +.+++++++++|++++++.+
T Consensus 322 ~~~~~l~~~~~----~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~~i~~l~~~~~~~~ 390 (391)
T PRK07309 322 YIFAKIPAGYN----QDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYAA-SMETIKEAMKRLKEYMEEHA 390 (391)
T ss_pred EEEEECCCCCC----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHHhhc
Confidence 99999985421 12335777778788999999999987778899999986 78999999999999997643
No 32
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=2.7e-49 Score=398.23 Aligned_cols=341 Identities=22% Similarity=0.370 Sum_probs=281.2
Q ss_pred cccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCC-cEEEe
Q 011801 40 VIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPD-RIVMG 117 (477)
Q Consensus 40 ~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~-~i~~t 117 (477)
+|+|+.+.+.++ ++.+.+.+++.. .....|+++.|.++||+++++|+++.+| +.++++ +|++|
T Consensus 2 ~~~~~~g~p~~~~~~~~~~~~~~~~-------------~~~~~Y~~~~G~~~lr~aia~~~~~~~g--~~~~~~~~Iiit 66 (350)
T TIGR03537 2 LFDFGTGDPKEPTPPFIRKALIDAV-------------PEVSQYPSALGTKALREAISGWFERRFG--VKLDPDAQVLPS 66 (350)
T ss_pred eEeccCCCCCCCCCHHHHHHHHHHH-------------hccCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCcEEEc
Confidence 578888877665 566666666531 2356799999999999999999988777 567888 99999
Q ss_pred CChHHHHHHHHHHhcCCC---CeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeE
Q 011801 118 GGATGANELIMFCLANPG---DAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKG 194 (477)
Q Consensus 118 ~G~t~al~~i~~~l~~~G---d~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~ 194 (477)
+|+++++..++.+++++| |.|++++|+|+.|...++.. |+++++++++.+++|++|++++++++++ ++|+
T Consensus 67 ~Gs~~ai~~~~~~~~~~g~~~d~Vl~~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~~~ 139 (350)
T TIGR03537 67 AGSKEAIFHFPLVFIDPEEDRRRVIFGTPGYPVYERGALFA-GGEPTAVKLKKEDGFLLRLEKVEKSILE------ETKI 139 (350)
T ss_pred CChHHHHHHHHHHHcCCCCCCceEEEcCCCCcchHHHHHhc-CCEEEEcccCcccCCccCHHHHHHhhhh------ccEE
Confidence 999999999999999887 69999999999999999887 9999999997667899999999998865 7899
Q ss_pred EEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCC
Q 011801 195 LIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPG 274 (477)
Q Consensus 195 vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G 274 (477)
+++++||||||.+++.+++++|+++|+++|++||+||+|..+.++. ...++... ..+++++++||||.+|+||
T Consensus 140 i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~------~~~~~i~~~s~SK~~g~~G 212 (350)
T TIGR03537 140 VWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGE-PPHSALEV------GIENVLAFHSLSKRSGMTG 212 (350)
T ss_pred EEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCC-CCCchhhc------CcCCEEEEeecccccCCcc
Confidence 9999999999999999999999999999999999999999876654 33444332 3478999999999999999
Q ss_pred ceEEEEEeCCHHHHHHHHHhc-ccC-CCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCc
Q 011801 275 FRVGIVYSFNDTVVNCGRKMS-SFG-LVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNA 352 (477)
Q Consensus 275 ~RvG~i~~~~~~i~~~~~~~~-~~~-~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~ 352 (477)
+|+||++++++ +...++... .++ ..+.+.|.++..++.+.+ ++++.+++++++++.+.+.|++.|+++.++++
T Consensus 213 lRiG~~~~~~~-~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~----~~~~~r~~l~~~~~~~~~~l~~~g~~~~~~~g 287 (350)
T TIGR03537 213 YRSGFVAGDEK-LISFLRKLRANFGVASPDFVQAAAKAAWSDDN----HVLERRKIFKRKRDLFIEFFNKVGLEYLYPDA 287 (350)
T ss_pred ccceeeecCHH-HHHHHHHHHHhhccCCCHHHHHHHHHHhCCcH----HHHHHHHHHHHHHHHHHHHHHHCCCcccCCCe
Confidence 99999998544 444444433 232 234467888877777644 46677889999999999999999998889999
Q ss_pred eEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHH
Q 011801 353 GLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAA 422 (477)
Q Consensus 353 g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~ 422 (477)
|+|+|++++...+ ..++++.+++ +||.|.||+.|+...+++||++++ .+++++++++++|++
T Consensus 288 ~~~~~~~~~~~~~------~~~l~~~L~~-~gv~v~~g~~f~~~~~~~~Ri~~~-~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 288 TFYLWVKVPSGID------AKDYALRLLE-NGIVVAPGENFGSGEEGYVRVALV-PTLEECEEALRLWER 349 (350)
T ss_pred EEEEEEECCCCCC------HHHHHHHHHH-CCEEEcCchhhCCCCCCEEEEEec-CCHHHHHHHHHHHhc
Confidence 9999999985322 2357777765 599999999998766789999997 588999999999875
No 33
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=1.4e-49 Score=408.28 Aligned_cols=351 Identities=19% Similarity=0.281 Sum_probs=279.6
Q ss_pred Ccccccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEE
Q 011801 37 PGGVIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIV 115 (477)
Q Consensus 37 ~~~~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~ 115 (477)
..++|+|+.++++.+ ++.+.+.+.+.-... ........|++..|.++||+++|+|+.+.+| +.+++++|+
T Consensus 33 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g--~~~~~~~I~ 103 (409)
T PRK07590 33 EAKIIRLGIGDVTQPLPPAVIEAMHKAVDEM-------GTAETFRGYGPEQGYDFLREKIAENDYQARG--CDISADEIF 103 (409)
T ss_pred CCceEEecCcCCCCCCCHHHHHHHHHHHhcc-------cccCCccCCCCCCCCHHHHHHHHHHHHHhcC--CcCChhhEE
Confidence 346899999998875 355555555421100 0001346798889999999999999877766 568899999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcE-----------EEEEeccCCCCcccCHHHHHHHHHH
Q 011801 116 MGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQ-----------IVPVHCDISNNFKITREALEAAYER 184 (477)
Q Consensus 116 ~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~-----------~~~v~~~~~~~f~i~~~~l~~~~~~ 184 (477)
+|+|+++++.+++ .+++|||+|++++|+|+.|...++.. |.+ +++++++.+++|.++.++
T Consensus 104 it~Ga~~al~~l~-~~~~~gd~V~v~~P~Y~~~~~~~~~~-g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~------- 174 (409)
T PRK07590 104 ISDGAKCDTGNIL-DIFGPDNTIAVTDPVYPVYVDTNVMA-GRTGEANEDGRYSGIVYLPCTAENNFVPELPE------- 174 (409)
T ss_pred ECCCHHHHHHHHH-HhcCCCCEEEEeCCCCcchHHHHHHc-CCcccccccccccceeEeecccccCCcccCcc-------
Confidence 9999999999875 45689999999999999999888877 886 899998766667666431
Q ss_pred HHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEe
Q 011801 185 AQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIY 264 (477)
Q Consensus 185 ~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~ 264 (477)
.++|+|++||||||||.+++.+++++|+++|+++|++||+||+|.++.+++....++..+.. ..+++++++
T Consensus 175 -----~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~----~~~~vi~~~ 245 (409)
T PRK07590 175 -----EKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEG----ARECAIEFR 245 (409)
T ss_pred -----cCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCC----cccceEEEe
Confidence 27899999999999999999999999999999999999999999988776543345544321 236799999
Q ss_pred cCCcccCCCCceEEEEEeCCHHHHH-----------HHH-H-hcccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHH
Q 011801 265 SLSKDMGLPGFRVGIVYSFNDTVVN-----------CGR-K-MSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAK 331 (477)
Q Consensus 265 SlSK~~g~~G~RvG~i~~~~~~i~~-----------~~~-~-~~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~ 331 (477)
||||.+|+||+|+||++++++.+.. ... + ...+..+|.++|.++..++.+.. ..++++.++.+++
T Consensus 246 SfSK~~~~pGlRiG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~--~~~~~~~~~~~~~ 323 (409)
T PRK07590 246 SFSKTAGFTGTRCAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEG--KAQIKELIDYYME 323 (409)
T ss_pred cCccccCCcCceeEEEEcCHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCc--HHHHHHHHHHHHH
Confidence 9999999999999999997765531 111 1 12334578899999999887643 3568888999999
Q ss_pred HHHHHHHHHhhCCCeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHH
Q 011801 332 RHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDD 411 (477)
Q Consensus 332 r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e 411 (477)
+++.+.+.|++.|+.+..+.+|+|+|++++.... ..+++..+++++||.+.||+.|+..+.+|+||+++. +++
T Consensus 324 ~r~~l~~~L~~~~~~~~~~~g~~f~wi~~~~~~~------~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~ 396 (409)
T PRK07590 324 NAKIIREGLESAGFEVYGGVNAPYIWVKTPDGMS------SWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAFG-SRE 396 (409)
T ss_pred HHHHHHHHHHhcCCceecCCcceEEEEECCCCCC------HHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEccC-CHH
Confidence 9999999999999888888899999999985322 235778888888999999999986667899999753 899
Q ss_pred HHHHHHHHHHHH
Q 011801 412 TLQVALNRIAAF 423 (477)
Q Consensus 412 ~l~~~l~~l~~~ 423 (477)
++++++++|+++
T Consensus 397 ~l~~~l~rl~~~ 408 (409)
T PRK07590 397 NVLEAMERIKKA 408 (409)
T ss_pred HHHHHHHHHHhh
Confidence 999999999875
No 34
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.1e-49 Score=404.03 Aligned_cols=359 Identities=24% Similarity=0.398 Sum_probs=295.0
Q ss_pred Ccccccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEE
Q 011801 37 PGGVIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIV 115 (477)
Q Consensus 37 ~~~~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~ 115 (477)
+.++|+|+.+.+.++ ++.+.+.+.+... +....|++..|.++||+++++++.+.+| +.+++++|+
T Consensus 32 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~G~~~lr~~ia~~l~~~~g--~~~~~~~i~ 97 (402)
T PRK06107 32 GRSIVDLTVGEPDFDTPDHIKQAAVAAIE------------RGETKYTLVNGTPALRKAIIAKLERRNG--LHYADNEIT 97 (402)
T ss_pred cCCEEEcCCCCCCCCCCHHHHHHHHHHHH------------cCCCCCCCCCCCHHHHHHHHHHHHHhcC--CCCChhhEE
Confidence 346899999988775 3555555554211 1235799999999999999999987766 456789999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEE
Q 011801 116 MGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGL 195 (477)
Q Consensus 116 ~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~v 195 (477)
+|+|+++|+..++.+++++||.|++++|+|+.|...+... |.+++.++++.+++|.+|++++++++++ ++++|
T Consensus 98 ~t~G~~~al~~~~~~~~~~gd~vl~~~p~y~~y~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~~------~~~~v 170 (402)
T PRK06107 98 VGGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMVLAN-DGTPVIVACPEEQGFKLTPEALEAAITP------RTRWL 170 (402)
T ss_pred EeCCHHHHHHHHHHHhcCCCCEEEEecCCCcCHHHHHHHc-CCEEEEecCCcccCCCCCHHHHHhhcCc------CceEE
Confidence 9999999999999999999999999999999998877766 8888888887566789999999988753 78899
Q ss_pred EEeCCCCCcccCCCHHHHHHHHHHHHhc-CeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCC
Q 011801 196 IITNPSNPLGTTLDRDTLKSLVSFINDK-NIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPG 274 (477)
Q Consensus 196 ii~nP~NPtG~~~~~~~l~~l~~~~~~~-~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G 274 (477)
+++||+||||.+++.+++++|+++|+++ ++++|+||+|+++.|.+..+.++.....+ ..+++++++||||.||+||
T Consensus 171 ~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~---~~~~vi~~~S~SK~~~~pG 247 (402)
T PRK06107 171 ILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPE---LRDRVLVTNGVSKTYAMTG 247 (402)
T ss_pred EEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcC---ccCCEEEEeccchhhcCcc
Confidence 9999999999999999999999999998 99999999999888877666666655331 2468999999999999999
Q ss_pred ceEEEEEeCCHHHHHHHHHhc--ccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEecCC
Q 011801 275 FRVGIVYSFNDTVVNCGRKMS--SFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLKSN 351 (477)
Q Consensus 275 ~RvG~i~~~~~~i~~~~~~~~--~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~~~ 351 (477)
+|+||++++++ +.+.+.... ....++.++|.++..+|.++ +.++++.++.++++++.+.+.|++. |+.+.+++
T Consensus 248 lRiG~~~~~~~-~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~p~ 323 (402)
T PRK06107 248 WRIGYAAGPAD-LIAAINKLQSQSSSCPSSISQAAAAAALNGD---QSFVTESVAVYKQRRDYALALLNAIPGLSCLVPD 323 (402)
T ss_pred cceeeeecCHH-HHHHHHHHHHhcccCCChHHHHHHHHHhcCC---hHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCC
Confidence 99999999655 444444433 23458899999999999754 3567888889999999999999987 88888899
Q ss_pred ceEEEEeeccchhhc---cC--chHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhh
Q 011801 352 AGLFFWMDLRHLLKE---KT--LEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 352 ~g~~~~~~l~~~~~~---~~--~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~ 426 (477)
+|+|+|++++...+. .. ...+.+++..+++++||.+.||+.|+. ++|+||+|+. +++++++++++|++++++
T Consensus 324 gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~--~~~iRis~~~-~~e~l~~~l~~l~~~l~~ 400 (402)
T PRK06107 324 GAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGL--SPYFRLSIAT-SLETLEEACARIERAVAA 400 (402)
T ss_pred cceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCccccCC--CCeEEEEeCC-CHHHHHHHHHHHHHHHHh
Confidence 999999998643111 11 123456888888889999999999964 6799999996 899999999999999865
No 35
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=6.4e-49 Score=400.83 Aligned_cols=349 Identities=24% Similarity=0.363 Sum_probs=288.2
Q ss_pred ccccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEe
Q 011801 39 GVIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMG 117 (477)
Q Consensus 39 ~~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t 117 (477)
++|+|+.+++..+ ++.+.+.+.+.-. .....|++..|.+++|+++|+|+++.+| +.+++++|++|
T Consensus 33 ~~i~l~~g~~~~~~~~~v~~a~~~~~~------------~~~~~Y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~~i~it 98 (387)
T PRK08960 33 DVIHLEIGEPDFTTAEPIVAAGQAALA------------AGHTRYTAARGLPALREAIAGFYAQRYG--VDVDPERILVT 98 (387)
T ss_pred CeEEeCCCCCCCCCCHHHHHHHHHHHh------------cCCCccCCCCCCHHHHHHHHHHHHHHhC--CCCChhhEEEc
Confidence 5799999998864 5556666555311 1234688889999999999999987766 55789999999
Q ss_pred CChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEE
Q 011801 118 GGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLII 197 (477)
Q Consensus 118 ~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii 197 (477)
+|+++++.+++.++++|||.|++++|+|+.+...+... |.+++.++++.+++|.+|++++++++++ +++++++
T Consensus 99 ~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~~~i~i 171 (387)
T PRK08960 99 PGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLRLV-EGAAQLVPVGPDSRYQLTPALVERHWNA------DTVGALV 171 (387)
T ss_pred cCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhc-CCeEEEEecCcccCCCCCHHHHHHHhCc------cceEEEE
Confidence 99999999999999999999999999999999888877 9999999998777899999999988764 6788999
Q ss_pred eCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceE
Q 011801 198 TNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRV 277 (477)
Q Consensus 198 ~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~Rv 277 (477)
++||||||.+++.+++++|+++|+++|+++|+||+|.++.|++. ..++.. ..+++++++||||.+|+||+|+
T Consensus 172 ~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~-~~~~~~-------~~~~vi~~~S~SK~~g~~GlRi 243 (387)
T PRK08960 172 ASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVD-AASVLE-------VDDDAFVLNSFSKYFGMTGWRL 243 (387)
T ss_pred ECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCC-CCChhh-------ccCCEEEEeecccccCCcccEE
Confidence 99999999999999999999999999999999999998877543 344332 2367999999999999999999
Q ss_pred EEEEeCCHHHHHHHHHhcc--cCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeE-ecCCceE
Q 011801 278 GIVYSFNDTVVNCGRKMSS--FGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINC-LKSNAGL 354 (477)
Q Consensus 278 G~i~~~~~~i~~~~~~~~~--~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~-~~~~~g~ 354 (477)
||++++++. .+.+.+... ...+|.+.|.++..+|.+. . ++++++.++.++++++.+.+.|++.|+.+ ..+.+|+
T Consensus 244 G~~~~~~~~-~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~-~-~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~ 320 (387)
T PRK08960 244 GWLVAPPAA-VPELEKLAQNLYISASTPAQHAALACFEPE-T-LAILEARRAEFARRRDFLLPALRELGFGIAVEPQGAF 320 (387)
T ss_pred EEEEcCHHH-HHHHHHHHhhhccCCCHHHHHHHHHHhhcC-c-HHHHHHHHHHHHHHHHHHHHHHHhcCCcCCcCCCeeE
Confidence 999997654 444444332 2346889999999998753 2 56788889999999999999999988765 4688999
Q ss_pred EEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCC-CCCEEEEEeccCCHHHHHHHHHHHHHHHh
Q 011801 355 FFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCT-EPGWFRVCFANMDDDTLQVALNRIAAFVQ 425 (477)
Q Consensus 355 ~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~-~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~ 425 (477)
|+|++++.... +..++++.+++++||.|.||+.|+.. .++|+||||+. +.+.+.+++++|+++++
T Consensus 321 f~~~~~~~~~~-----~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~-~~~~l~~al~~l~~~~~ 386 (387)
T PRK08960 321 YLYADISAFGG-----DAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQ-SLPRLQEAVERIARGLR 386 (387)
T ss_pred EEEEeccccCC-----CHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHh
Confidence 99999985211 12367788888889999999999753 35799999996 78999999999998875
No 36
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=4.7e-49 Score=401.18 Aligned_cols=348 Identities=19% Similarity=0.325 Sum_probs=283.8
Q ss_pred ccccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCC-CcEEE
Q 011801 39 GVIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDP-DRIVM 116 (477)
Q Consensus 39 ~~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~-~~i~~ 116 (477)
++|+|+.+++.++ ++.+.+.+.+... .....|++..|.++||+++++++.+.+| +.+++ ++|++
T Consensus 30 ~~i~l~~g~p~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~G~~~lr~~ia~~l~~~~g--~~~~~~~~i~i 95 (384)
T PRK12414 30 DALNLSQGAPNFAPDPALVEGVARAMR------------DGHNQYAPMAGIAALREALAEKTERLYG--ARYDPASEVTV 95 (384)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHHH------------hCCCCcCCCCCcHHHHHHHHHHHHHHhC--CCCCCCCcEEE
Confidence 5799999998875 4556665554210 1235799999999999999999988777 34455 68999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEE
Q 011801 117 GGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLI 196 (477)
Q Consensus 117 t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vi 196 (477)
|+|+++++..+++++++|||.|+++.|+|..+...++.. |+++++++++. ++|.+|+++|++++++ ++|+|+
T Consensus 96 t~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~v~~~~-~~~~~d~~~l~~~l~~------~~~~v~ 167 (384)
T PRK12414 96 IASASEGLYAAISALVHPGDEVIYFEPSFDSYAPIVRLQ-GATPVAIKLSP-EDFRVNWDEVAAAITP------RTRMII 167 (384)
T ss_pred ECChHHHHHHHHHHhcCCCCEEEEeCCCccchHHHHHHc-CCEEEEEecCc-cccccCHHHHHhhcCc------ccEEEE
Confidence 999999999999999999999999999999998888877 99999999874 4688999999988753 789999
Q ss_pred EeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCce
Q 011801 197 ITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFR 276 (477)
Q Consensus 197 i~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~R 276 (477)
++|||||||.+++.+++++|+++|+++|+++|+||+|.++.|++..+.++..... ..+++++++||||.||+||+|
T Consensus 168 i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~----~~~~~i~~~SfSK~~~~pGlR 243 (384)
T PRK12414 168 VNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRE----LAERSVIVSSFGKSYHVTGWR 243 (384)
T ss_pred EcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcC----ccCcEEEEecccccccCccce
Confidence 9999999999999999999999999999999999999998887654445443321 246899999999999999999
Q ss_pred EEEEEeCCHHHHHHHHHhc--ccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceE
Q 011801 277 VGIVYSFNDTVVNCGRKMS--SFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGL 354 (477)
Q Consensus 277 vG~i~~~~~~i~~~~~~~~--~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~ 354 (477)
+||++++++.+ +.+.+.. ....++.++|.++..+|.++.+ ..+.++.++++++.+.+.|++.|+.+.++.+|+
T Consensus 244 iG~~v~~~~l~-~~l~~~~~~~~~~~s~~~q~a~~~~l~~~~~----~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~gg~ 318 (384)
T PRK12414 244 VGYCLAPAELM-DEIRKVHQFMVFSADTPMQHAFAEALAEPAS----YLGLGAFYQRKRDLLARELAGSRFELLPSEGSF 318 (384)
T ss_pred EEEEecCHHHH-HHHHHHHhheecCCCcHHHHHHHHHhcCChH----HHHHHHHHHHHHHHHHHHHHhCCCeecCCCcce
Confidence 99999976544 4444333 2344788999999999988654 234677889999999999999999888999999
Q ss_pred EEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCC--CCEEEEEeccCCHHHHHHHHHHHHH
Q 011801 355 FFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTE--PGWFRVCFANMDDDTLQVALNRIAA 422 (477)
Q Consensus 355 ~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~--~~~~Rl~~~~~~~e~l~~~l~~l~~ 422 (477)
|+|++++..... .+.+++..++.++||.|.||+.|+..+ .+|+||+|+. +++++++++++|.+
T Consensus 319 ~~~~~~~~~~~~----~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~-~~~~~~~~~~rl~~ 383 (384)
T PRK12414 319 FMLARFRHFSDE----SDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSK-DDATLVEGARRLCS 383 (384)
T ss_pred EEEEcccccCCC----CHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecC-CHHHHHHHHHHHhh
Confidence 999998753211 122567677888899999999996433 5799999997 79999999999975
No 37
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=8.2e-49 Score=399.50 Aligned_cols=352 Identities=24% Similarity=0.440 Sum_probs=291.4
Q ss_pred cccccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEE
Q 011801 38 GGVIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVM 116 (477)
Q Consensus 38 ~~~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~ 116 (477)
.++|+|+.++++++ ++.+.+.+.+.-. .....|++..|.++||+++|+++.+.+| +.+++++|++
T Consensus 24 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~G~~~lr~~la~~~~~~~~--~~~~~~~i~~ 89 (382)
T PRK06108 24 EGVLPLWFGESDLPTPDFIRDAAAAALA------------DGETFYTHNLGIPELREALARYVSRLHG--VATPPERIAV 89 (382)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCcCcceEEE
Confidence 36899999999886 4666666655311 1123599989999999999999987766 4578999999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCC-CCcccCHHHHHHHHHHHHHhCCCeeEE
Q 011801 117 GGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDIS-NNFKITREALEAAYERAQEASINIKGL 195 (477)
Q Consensus 117 t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~-~~f~i~~~~l~~~~~~~~~~~~~~k~v 195 (477)
|+|+++++..++.+++++||.|++++|+|+.+...++.. |++++.++++.+ ++|.+|++++++++.+ ++++|
T Consensus 90 t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~~d~~~l~~~~~~------~~~~i 162 (382)
T PRK06108 90 TSSGVQALMLAAQALVGPGDEVVAVTPLWPNLVAAPKIL-GARVVCVPLDFGGGGWTLDLDRLLAAITP------RTRAL 162 (382)
T ss_pred eCChHHHHHHHHHHhcCCCCEEEEeCCCccchHHHHHHC-CCEEEEeeCCCCCCCccCCHHHHHHhcCc------cceEE
Confidence 999999999999999999999999999999999888876 999999998753 5788999999988753 78899
Q ss_pred EEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccC-CCCcccHHHhhhhccCCCCcEEEEecCCcccCCCC
Q 011801 196 IITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFS-SPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPG 274 (477)
Q Consensus 196 ii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~-~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G 274 (477)
++++||||||.+++.+++++|+++|+++|+++|+||+|+++.++ +....++..+.. ..+++++++||||.||++|
T Consensus 163 ~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~----~~~~~i~~~S~SK~~g~~G 238 (382)
T PRK06108 163 FINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAE----PDDRIIFVNSFSKNWAMTG 238 (382)
T ss_pred EEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCC----CcCCEEEEeechhhccCcc
Confidence 99999999999999999999999999999999999999998776 333344444432 2468999999999999999
Q ss_pred ceEEEEEeCCHHHHHHHHHhcc--cCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEecCC
Q 011801 275 FRVGIVYSFNDTVVNCGRKMSS--FGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLKSN 351 (477)
Q Consensus 275 ~RvG~i~~~~~~i~~~~~~~~~--~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~~~ 351 (477)
+|+||++++++.+ +.+.+... ...++.+.|.++..+|.+. +.++++.+++++++++.+.+.|++. |+.+..++
T Consensus 239 ~RiG~~~~~~~~~-~~~~~~~~~~~~~~~~~~q~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~ 314 (382)
T PRK06108 239 WRLGWLVAPPALG-QVLEKLIEYNTSCVAQFVQRAAVAALDEG---EDFVAELVARLRRSRDHLVDALRALPGVEVAKPD 314 (382)
T ss_pred cceeeeeCCHHHH-HHHHHHHHhcccCCChHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCC
Confidence 9999999966544 43433322 2347889999999999875 3456778889999999999999887 88888899
Q ss_pred ceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHh
Q 011801 352 AGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQ 425 (477)
Q Consensus 352 ~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~ 425 (477)
+|+|+|++++...+ ..++++.+++++||.+.||+.|+..+++++|++++. +++++++++++|+++++
T Consensus 315 ~g~~~~~~l~~~~~------~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 315 GAMYAFFRIPGVTD------SLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFAR-DPARLDEAVERLRRFLA 381 (382)
T ss_pred eeEEEEEeCCCCCC------HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHh
Confidence 99999999985321 235788888888999999999976667899999997 99999999999999875
No 38
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=1.5e-48 Score=398.10 Aligned_cols=354 Identities=26% Similarity=0.402 Sum_probs=285.4
Q ss_pred cccccccccccccH-HHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCC-cEEE
Q 011801 39 GVIQLGLAENQLCF-DLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPD-RIVM 116 (477)
Q Consensus 39 ~~i~l~~~~n~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~-~i~~ 116 (477)
++|+|+.+.+..+. +.+.+.+.+... .....|++..|.++||+++|+++++.+| +.++++ +|++
T Consensus 27 ~~i~l~~g~p~~~~p~~~~~~~~~~~~------------~~~~~Y~~~~G~~~lr~~ia~~~~~~~g--~~~~~~~~i~~ 92 (387)
T PRK08912 27 GAINLGQGFPDDPGPEDVRRAAADALL------------DGSNQYPPMMGLPELRQAVAAHYARFQG--LDLDPETEVMV 92 (387)
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCCCcccEEE
Confidence 57999887755532 223333332100 1235799999999999999999987766 557888 9999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEE
Q 011801 117 GGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLI 196 (477)
Q Consensus 117 t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vi 196 (477)
|+|+++++.+++..++++||.|++++|+|+.+...++.. |++++.++++. ++|.+|++++++++.+ ++|+|+
T Consensus 93 t~G~~~al~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~~~~~~-~~~~~~~~~l~~~~~~------~~~~v~ 164 (387)
T PRK08912 93 TSGATEALAAALLALVEPGDEVVLFQPLYDAYLPLIRRA-GGVPRLVRLEP-PHWRLPRAALAAAFSP------RTKAVL 164 (387)
T ss_pred eCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHc-CCEEEEEecCc-ccCcCCHHHHHHHhCc------cceEEE
Confidence 999999999999999999999999999999999988877 99999999864 4688999999988753 789999
Q ss_pred EeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCce
Q 011801 197 ITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFR 276 (477)
Q Consensus 197 i~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~R 276 (477)
++|||||||.+++.+++++|+++|++++++||+||+|.++.|++..+.++..+.. ..+++++++||||.||+||+|
T Consensus 165 l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~----~~~~~i~~~S~SK~~g~~GlR 240 (387)
T PRK08912 165 LNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPG----MRERTVKIGSAGKIFSLTGWK 240 (387)
T ss_pred EeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCC----ccCceEEEeechhhccCcCce
Confidence 9999999999999999999999999999999999999988887655556554321 246899999999999999999
Q ss_pred EEEEEeCCHHHHHHHHHhccc--CCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceE
Q 011801 277 VGIVYSFNDTVVNCGRKMSSF--GLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGL 354 (477)
Q Consensus 277 vG~i~~~~~~i~~~~~~~~~~--~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~ 354 (477)
+||++++++.+ +.+...... +.+++..|.++...|... ++++++.+++++++++.+.+.|++.|+.+.++++|+
T Consensus 241 iG~~~~~~~~~-~~l~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~g~~ 316 (387)
T PRK08912 241 VGFVCAAPPLL-RVLAKAHQFLTFTTPPNLQAAVAYGLGKP---DDYFEGMRADLARSRDRLAAGLRRIGFPVLPSQGTY 316 (387)
T ss_pred eEEEecCHHHH-HHHHHHHhhccccCChHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcce
Confidence 99999966544 434333222 345667888887777532 345678888999999999999999999988999999
Q ss_pred EEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCC--CCCEEEEEeccCCHHHHHHHHHHHHHHHhh
Q 011801 355 FFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCT--EPGWFRVCFANMDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 355 ~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~--~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~ 426 (477)
|+|++++..... .++.++++.++++.||.|.||..|+.. .++|+||+|+. +++.+++++++|++++++
T Consensus 317 ~l~~~l~~~~~~---~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~-~~~~l~~~l~rl~~~l~~ 386 (387)
T PRK08912 317 FLTVDLAPLGLA---EDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAK-RDATLDEAVERLAAARRR 386 (387)
T ss_pred EEEecccccCCC---CCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeC-CHHHHHHHHHHHHHHHhc
Confidence 999999852110 123468888888889999999999643 35899999996 789999999999998865
No 39
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=1.9e-48 Score=399.20 Aligned_cols=357 Identities=21% Similarity=0.328 Sum_probs=288.5
Q ss_pred cccccccccccc----c-cHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCC
Q 011801 38 GGVIQLGLAENQ----L-CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPD 112 (477)
Q Consensus 38 ~~~i~l~~~~n~----~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ 112 (477)
.++|+|+.++.. + +++.+.+.+.+.-.. .....|++..|.++||+++|+++++. + ..++++
T Consensus 31 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~Y~~~~g~~~lr~aia~~~~~~-~--~~~~~~ 96 (401)
T TIGR01264 31 KPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDS-----------GKYNGYAPTVGALSAREAIASYYHNP-D--GPIEAD 96 (401)
T ss_pred CCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhc-----------cCCCCCCCCCCCHHHHHHHHHHHhhc-C--CCCCHH
Confidence 367999988753 3 345555555442110 12356988899999999999999863 3 347899
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCe
Q 011801 113 RIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINI 192 (477)
Q Consensus 113 ~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~ 192 (477)
+|++|+|+++++.+++.+++++||.|++++|+|+.+...++.. |+++++++++.+++|++|++++++++++ ++
T Consensus 97 ~i~~t~G~~~al~~~~~~l~~~gd~v~i~~P~y~~~~~~~~~~-g~~v~~~~~~~~~~~~~d~~~l~~~~~~------~~ 169 (401)
T TIGR01264 97 DVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYETLAESM-GIEVKLYNLLPDKSWEIDLKQLESLIDE------KT 169 (401)
T ss_pred HEEECcChHHHHHHHHHHhCCCCCEEEEeCCCChhHHHHHHHc-CCEEEEeecCCccCCCCCHHHHHHHhcc------Cc
Confidence 9999999999999999999999999999999999999888877 9999999987666789999999987754 67
Q ss_pred eEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCC
Q 011801 193 KGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGL 272 (477)
Q Consensus 193 k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~ 272 (477)
++|+++|||||||.+++.+++++|+++|+++|++||+||+|.++.|++..+.++..+.. ..++++++||||.|++
T Consensus 170 ~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-----~~~vi~~~SfSK~~~~ 244 (401)
T TIGR01264 170 AALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSS-----TVPILSCGGLAKRWLV 244 (401)
T ss_pred eEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCC-----CCcEEEEccCcccCCC
Confidence 89999999999999999999999999999999999999999998887655566665532 2358999999999999
Q ss_pred CCceEEEEEeCCH-----HHHHHHHHhc-ccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CC
Q 011801 273 PGFRVGIVYSFND-----TVVNCGRKMS-SFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GI 345 (477)
Q Consensus 273 ~G~RvG~i~~~~~-----~i~~~~~~~~-~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi 345 (477)
||+|+||+++++. .+.+.++++. ..+.+++++|.++..+|.+. . +.++++.++.++++++.+.+.|+++ |+
T Consensus 245 ~GlRiG~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~-~-~~~l~~~~~~~~~~r~~l~~~L~~~~~~ 322 (401)
T TIGR01264 245 PGWRLGWIIIHDRRGILRDIRDGLVKLSQRILGPCTIVQGALPSILLRT-P-QEYFDGTLSVLESNAMLCYGALAAVPGL 322 (401)
T ss_pred ccceEEEEEecCcchhHHHHHHHHHHHhhccCCCCcHHHHHHHHHHHhC-c-HHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999998752 2333333332 23457889999999999763 2 5678888999999999999999988 77
Q ss_pred eEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHh
Q 011801 346 NCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQ 425 (477)
Q Consensus 346 ~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~ 425 (477)
.+..+++|+|+|++++..... ....+.+++..+++++||.|.||+.|+ .++++|++|+. +++++++++++|+++++
T Consensus 323 ~~~~p~~g~f~~~~~~~~~~~-~~~~~~~~~~~l~~~~gI~v~pg~~f~--~~~~iRis~~~-~~~~l~~~l~rl~~~~~ 398 (401)
T TIGR01264 323 RPVMPSGAMYMMVGIEMEHFP-EFKNDVEFTERLVAEQSVFCLPGSCFE--YPGFFRVVLTV-PVVMMEEACSRIQEFCE 398 (401)
T ss_pred cccCCCeeeEEEEEecccccC-CCCCHHHHHHHHHHhCCEEEeCchhcC--CCCeEEEEEcC-CHHHHHHHHHHHHHHHh
Confidence 777789999999998642000 111234678888878899999999986 37899999986 78999999999999987
Q ss_pred h
Q 011801 426 Q 426 (477)
Q Consensus 426 ~ 426 (477)
+
T Consensus 399 ~ 399 (401)
T TIGR01264 399 R 399 (401)
T ss_pred c
Confidence 5
No 40
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-48 Score=396.84 Aligned_cols=341 Identities=18% Similarity=0.258 Sum_probs=272.6
Q ss_pred ccccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEe
Q 011801 39 GVIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMG 117 (477)
Q Consensus 39 ~~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t 117 (477)
++|+|+.++++++ ++.+.+.+.+.. .....|++..|.++||+++|+|+++.+| +.+++++|++|
T Consensus 25 ~~i~l~~~~p~~~~~~~~~~a~~~~~-------------~~~~~Y~~~~G~~~lr~aia~~l~~~~g--~~~~~~~I~it 89 (374)
T PRK05839 25 KGLDLTIGEPQFETPKFIQDALKNNA-------------HLLNKYPKSAGEESLREAQRGFFKRRFK--IELKENELIPT 89 (374)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHh-------------hccCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCcceEEEe
Confidence 7899999998875 355666665531 2356799999999999999999988777 55789999999
Q ss_pred CChHHHHHHHHHHhc--CCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEE
Q 011801 118 GGATGANELIMFCLA--NPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGL 195 (477)
Q Consensus 118 ~G~t~al~~i~~~l~--~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~v 195 (477)
+|+++++..++..++ .+||.|++++|+|+.|...++.. |+++++++++.+++|.+|..+.+ ++ ++|+|
T Consensus 90 ~G~~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~-g~~v~~v~~~~~~~~~~d~~~~~--~~-------~~k~v 159 (374)
T PRK05839 90 FGTREVLFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIAS-RAKVLLMPLTKENDFTPSLNEKE--LQ-------EVDLV 159 (374)
T ss_pred cCcHHHHHHHHHHHhcCCCCCEEEECCCCchhhHHHHHhc-CCEEEEeecccccCCcCCcchhh--hc-------cccEE
Confidence 999999999888764 57999999999999999998876 99999999987778888865532 21 68899
Q ss_pred EEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhc-cCCCCcEEEEecCCcccCCCC
Q 011801 196 IITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEM-DCNRDLIHIIYSLSKDMGLPG 274 (477)
Q Consensus 196 ii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~-~~~~~~viiv~SlSK~~g~~G 274 (477)
+++|||||||++++.+++++|+++|+++|++||+||+|.++.++. .+.++....... ....+++++++||||.||+||
T Consensus 160 ~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~-~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~G 238 (374)
T PRK05839 160 ILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENT-PPPSLLEASILVGNESFKNVLVINSISKRSSAPG 238 (374)
T ss_pred EEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCC-CCCCHhhhhcccCccccCcEEEEeccccccCCcc
Confidence 999999999999999999999999999999999999999864433 344544322100 013478999999999999999
Q ss_pred ceEEEEEeCCHHHHHHHHHhcc--cCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCc
Q 011801 275 FRVGIVYSFNDTVVNCGRKMSS--FGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNA 352 (477)
Q Consensus 275 ~RvG~i~~~~~~i~~~~~~~~~--~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~ 352 (477)
+|+||++++++ +.+.+.+... .+.++.++|.++..++.+.+ ++++.+++++++++.+.+.| ++. .+++
T Consensus 239 lRiG~ii~~~~-~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~~l---~~~--~p~g 308 (374)
T PRK05839 239 LRSGFIAGDAS-ILKKYKAYRTYLGCASPLPLQKAAAVAWLDDE----HAEFFRNIYAKNLKLAREIL---GIT--IPPA 308 (374)
T ss_pred ceeEEEecCHH-HHHHHHHHHhhcCCCCChHHHHHHHHHhccch----HHHHHHHHHHHHHHHHHHhc---CCC--CCCe
Confidence 99999999654 4444444332 23478889999888887644 45667788888888887766 443 6788
Q ss_pred eEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCC--CCCEEEEEeccCCHHHHHHHHHHHHHHHh
Q 011801 353 GLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCT--EPGWFRVCFANMDDDTLQVALNRIAAFVQ 425 (477)
Q Consensus 353 g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~--~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~ 425 (477)
|+|+|++++. +.++++.+++++||.|.||+.|+.. +++|+|||++. +++++.+++++|+++++
T Consensus 309 g~fi~~~~~~---------~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~-~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 309 TFYVWLPVDN---------DEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVY-DTPKLEKALEIIKTYLE 373 (374)
T ss_pred eEEEEEeCCC---------hHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecC-CHHHHHHHHHHHHHHhh
Confidence 9999999872 1357888887789999999988753 36899999985 79999999999999885
No 41
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=1.9e-49 Score=401.40 Aligned_cols=358 Identities=32% Similarity=0.558 Sum_probs=300.1
Q ss_pred ccccccccccccc--HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCC-cEE
Q 011801 39 GVIQLGLAENQLC--FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPD-RIV 115 (477)
Q Consensus 39 ~~i~l~~~~n~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~-~i~ 115 (477)
.+|+|+.+.+... .+.+++++++..+ +.........|+++.|.++||+++|+|+++..| +.++++ +|+
T Consensus 2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~--~~~~~~~~i~ 72 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPPPPAAIKAAIR-------GAATSSSFLGYPPPQGYPELREAIADFLGRRYG--VPVDPEANIL 72 (363)
T ss_dssp TEEESSSSSTSSTTSSHHHHHHHHHHHH-------HHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHT--HHTTGGEGEE
T ss_pred CEEEEECCCCCCcccccchHHHHHHHHH-------HhhcccccccCCCchhhHHHHHHHHHHhhhccC--cccccceEEE
Confidence 4799999887764 2334444433211 011124567899999999999999999996655 667889 999
Q ss_pred EeCChHHHHHHHHHHh-cCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeE
Q 011801 116 MGGGATGANELIMFCL-ANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKG 194 (477)
Q Consensus 116 ~t~G~t~al~~i~~~l-~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~ 194 (477)
+++|+++++..++.++ .++||+|++++|+|+.+...++.. |.++++++++..++|.+|+++|++.+++.+.++.++++
T Consensus 73 ~~~G~~~~~~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~ 151 (363)
T PF00155_consen 73 VTSGAQAALFLLLRLLKINPGDTVLVPDPCYPSYIEAARLL-GAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKA 151 (363)
T ss_dssp EESHHHHHHHHHHHHHHSSTTSEEEEEESSSTHHHHHHHHT-TSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEE
T ss_pred EecccccchhhhhhcccccccccceecCCcccccccccccc-Cceeeeccccccccccccccccccccccccccccccce
Confidence 9999999999999999 899999999999999999999987 99999999987789999999999999876555546789
Q ss_pred EEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCC
Q 011801 195 LIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPG 274 (477)
Q Consensus 195 vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G 274 (477)
|+++||+||||.+++.+++++|+++|+++|++||+||+|+++.+..+.+.+....++ ...++++++||||.||+||
T Consensus 152 v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~----~~~~vi~~~S~SK~~g~~G 227 (363)
T PF00155_consen 152 VLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLD----EDDNVIVVGSLSKSFGLPG 227 (363)
T ss_dssp EEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHT----TTSTEEEEEESTTTTTSGG
T ss_pred eeecccccccccccccccccchhhhhcccccceeeeeceeccccCCCccCccccccc----ccccceeeeeccccccccc
Confidence 999999999999999999999999999999999999999998887665444333333 3345999999999999999
Q ss_pred ceEEEEEeCCHHHHHHHHHhcccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceE
Q 011801 275 FRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGL 354 (477)
Q Consensus 275 ~RvG~i~~~~~~i~~~~~~~~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~ 354 (477)
+|+||+++ ++.+.+.++.+...+..+++.|.++..++.+.....+++++.+++++++++.+.+.|++.|+.+.++++|+
T Consensus 228 lRvG~i~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~ 306 (363)
T PF00155_consen 228 LRVGYIVA-PPELIERLRRFQRSGLSSSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEIGITVLPPEAGF 306 (363)
T ss_dssp GTEEEEEE-EHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSEEEHHSBSS
T ss_pred cccccccc-hhhhhhhhhhccccccccchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhhhheeeccCcc
Confidence 99999999 55666666666555556889999999999987755668999999999999999999999999999999999
Q ss_pred EEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHH
Q 011801 355 FFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRI 420 (477)
Q Consensus 355 ~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l 420 (477)
|+|+.++.. ++.++++.++++.||.+.||..|+. ++|+|++++..+++++++++++|
T Consensus 307 ~~~~~~~~~-------~~~~l~~~L~~~~gi~v~pg~~~~~--~~~iRi~~a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 307 FLWVRLDPN-------DAEELAQELLEEYGILVRPGSYFGV--PGYIRISLASHSEEDLEEALERL 363 (363)
T ss_dssp EEEEEESHH-------HHHHHHHHHHHHHTEEEEEGGGGTS--TTEEEEEGGCSCHHHHHHHHHHH
T ss_pred EEEEEcccc-------hHHHHHHHHHHhCCEEEEecCCCCC--CCEEEEEeccCCHHHHHHHHhhC
Confidence 999999864 3447889999888999999999987 88999999667999999999987
No 42
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=2.3e-48 Score=396.87 Aligned_cols=353 Identities=22% Similarity=0.383 Sum_probs=286.1
Q ss_pred cccccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEE
Q 011801 38 GGVIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVM 116 (477)
Q Consensus 38 ~~~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~ 116 (477)
.++|+|+.+++.++ ++.+.+.+.+.-. .....|++..|.++||+++|+|+++.+| +.+++++|++
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~g~~~lr~~ia~~~~~~~~--~~~~~~~i~~ 95 (388)
T PRK07337 30 RDIIHMGIGEPDFTAPEPVVEAAARALR------------RGVTQYTSALGLAPLREAIAAWYARRFG--LDVAPERIVV 95 (388)
T ss_pred CCEEEeCCcCCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCCChHhEEE
Confidence 46899999988764 4555555554211 1345699888999999999999987766 4578999999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEE
Q 011801 117 GGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLI 196 (477)
Q Consensus 117 t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vi 196 (477)
|+|+++|+.+++.+++++||.|++++|+|+.+...++.. |.++++++++.+++|.+|++++++.+.+ ++++|+
T Consensus 96 t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~ 168 (388)
T PRK07337 96 TAGASAALLLACLALVERGDEVLMPDPSYPCNRHFVAAA-EGRPVLVPSGPAERFQLTAADVEAAWGE------RTRGVL 168 (388)
T ss_pred ecCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHc-CCEEEEeecCCccCCcCCHHHHHhhcCc------cceEEE
Confidence 999999999999999999999999999999998888776 9999999998667899999999988754 788999
Q ss_pred EeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCce
Q 011801 197 ITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFR 276 (477)
Q Consensus 197 i~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~R 276 (477)
++|||||||.+++.+++++|+++|+++++++|+||+|.++.|.+. +.+... ..+++++++||||.+|+||+|
T Consensus 169 l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~-------~~~~vi~~~S~SK~~~~~G~R 240 (388)
T PRK07337 169 LASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAA-PVSALS-------LGDDVITINSFSKYFNMTGWR 240 (388)
T ss_pred EECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCC-CcChhh-------ccCCEEEEEechhhcCCchhh
Confidence 999999999999999999999999999999999999998777543 233332 236789999999999999999
Q ss_pred EEEEEeCCHHHHHHHHHhc-c-cCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeE-ecCCce
Q 011801 277 VGIVYSFNDTVVNCGRKMS-S-FGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINC-LKSNAG 353 (477)
Q Consensus 277 vG~i~~~~~~i~~~~~~~~-~-~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~-~~~~~g 353 (477)
+||++++++.+ +.+.+.. . ...++.+.|.++..++.+..+ + ++++.++.++++++.+.+.|++.|+.+ ..+++|
T Consensus 241 iG~~~~~~~l~-~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~-~-~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g 317 (388)
T PRK07337 241 LGWLVVPEALV-GTFEKLAQNLFICASALAQHAALACFEPDTL-A-IYERRRAEFKRRRDFIVPALESLGFKVPVMPDGA 317 (388)
T ss_pred eeeeecCHHHH-HHHHHHHHHhccCCChHHHHHHHHHhccCch-H-HHHHHHHHHHHHHHHHHHHHHhcCCccccCCCee
Confidence 99999976544 4343332 2 234788999999999876543 2 356778899999999999999988765 467899
Q ss_pred EEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCC-CCCEEEEEeccCCHHHHHHHHHHHHHHH
Q 011801 354 LFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCT-EPGWFRVCFANMDDDTLQVALNRIAAFV 424 (477)
Q Consensus 354 ~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~-~~~~~Rl~~~~~~~e~l~~~l~~l~~~~ 424 (477)
+|+|++++....... ..+.+++..+++++||.|.||+.|+.. .++||||||+. +++.+++++++|++++
T Consensus 318 ~f~~~~~~~~~~~~~-~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~-~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 318 FYVYADCRGVAHPAA-GDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYAT-SMSRLEEAVARLGKLF 387 (388)
T ss_pred EEEEEecccccCCCC-CCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecC-CHHHHHHHHHHHHHHh
Confidence 999999985321111 123367788888889999999999753 36899999996 7999999999999875
No 43
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=3.1e-48 Score=401.13 Aligned_cols=341 Identities=21% Similarity=0.297 Sum_probs=276.1
Q ss_pred cccccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEE
Q 011801 38 GGVIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVM 116 (477)
Q Consensus 38 ~~~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~ 116 (477)
.++++|+.+....+ ++.+.+.+.+.. .....|++..|.++||+++++|+++..+ .+++|++
T Consensus 85 ~~~i~L~~g~p~~~~~p~~~~~~~~~~-------------~~~~~Y~~~~g~~~lr~~ia~~~~~~~~-----~~~~Iii 146 (431)
T PRK15481 85 TPLHDLAGGNPDPQRLPDLSRYFARLS-------------RTPRLYGDAPVSPELHAWAARWLRDDCP-----VAFEIDL 146 (431)
T ss_pred chhhhhhcCCCChhHhHHHHHHHHHhh-------------hhhhhcCCcCCCHHHHHHHHHHHhhccC-----CcCeEEE
Confidence 35788988754433 244555444421 1245799999999999999999985322 3569999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEE
Q 011801 117 GGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLI 196 (477)
Q Consensus 117 t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vi 196 (477)
|+|+++|+.++++++++|||.|++++|+|+.|...++.. |+++++++++.+ .+|+++|++++++ ++|+++
T Consensus 147 t~G~~~al~~~~~~l~~pgd~Vlv~~P~y~~~~~~~~~~-g~~~~~v~~~~~---g~~~~~l~~~~~~------~~k~i~ 216 (431)
T PRK15481 147 TSGAIDAIERLLCAHLLPGDSVAVEDPCFLSSINMLRYA-GFSASPVSVDAE---GMQPEKLERALAQ------GARAVI 216 (431)
T ss_pred ecCcHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHc-CCeEEeeccCCC---CCCHHHHHHHHhc------CCCEEE
Confidence 999999999999999999999999999999999999887 999999998643 3789999988864 678888
Q ss_pred Ee-CCCCCcccCCCHHHHHHHHHHHHhc-CeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCC
Q 011801 197 IT-NPSNPLGTTLDRDTLKSLVSFINDK-NIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPG 274 (477)
Q Consensus 197 i~-nP~NPtG~~~~~~~l~~l~~~~~~~-~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G 274 (477)
++ |||||||.+++.+++++|+++|+++ +++||+||+|.++.+.. +.+.... ..+++++++||||.|| ||
T Consensus 217 ~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~--~~~~~~~------~~~~vi~~~SfSK~~~-~G 287 (431)
T PRK15481 217 LTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSP--YHSVIPQ------TTQRWALIRSVSKALG-PD 287 (431)
T ss_pred ECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCC--CCCCCcC------CCCCEEEEeeeccccC-CC
Confidence 87 9999999999999999999999999 99999999999876543 1222111 3468999999999999 99
Q ss_pred ceEEEEEeCCHHHHHHHHHhcc-cCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCce
Q 011801 275 FRVGIVYSFNDTVVNCGRKMSS-FGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAG 353 (477)
Q Consensus 275 ~RvG~i~~~~~~i~~~~~~~~~-~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g 353 (477)
+|+||++++++.+......... ...+|.++|.++..+|+++++ ++++++.++.++++++.+.+.|++.|+.+..+++|
T Consensus 288 lRiG~~i~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~-~~~l~~~~~~~~~~r~~~~~~L~~~~~~~~~p~gg 366 (431)
T PRK15481 288 LRLAFVASDSATSARLRLRLNSGTQWVSHLLQDLVYACLTDPEY-QARLAQARLFYAQRRQKLARALQQYGIAIPSPGDG 366 (431)
T ss_pred ceeEEEeCCHHHHHHHHHHHhccccCCCHHHHHHHHHHHhCccH-HHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCe
Confidence 9999999966544333222222 134789999999999999877 77889999999999999999999999888788999
Q ss_pred EEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCC-CCEEEEEeccCCHHHHHHHHHHHHHHHh
Q 011801 354 LFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTE-PGWFRVCFANMDDDTLQVALNRIAAFVQ 425 (477)
Q Consensus 354 ~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~-~~~~Rl~~~~~~~e~l~~~l~~l~~~~~ 425 (477)
+|+|++++.. ..+++..+. ++||.|.||+.|+... .+|+||||+..+++++++++++|++++.
T Consensus 367 ~f~~~~l~~~--------~~~~~~~l~-~~gV~v~pg~~f~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 367 LNLWLPLDTD--------SQATALTLA-KSGWLVREGEAFGVSAPSHGLRITLSTLNDAEINRLAADLHQALN 430 (431)
T ss_pred EEEEEECCCC--------HHHHHHHHH-HCCcEEecCCccccCCCCCeEEEEcCCCChHHHHHHHHHHHHHhc
Confidence 9999999841 124666665 5699999999996532 4689999998889999999999999875
No 44
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=5.2e-48 Score=393.90 Aligned_cols=352 Identities=25% Similarity=0.445 Sum_probs=289.2
Q ss_pred cccccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCC-cEE
Q 011801 38 GGVIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPD-RIV 115 (477)
Q Consensus 38 ~~~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~-~i~ 115 (477)
+++|+|+.+.+.++ ++.+.+.+.+..+ .....|++..|.++||+++|+++++.+| +.++++ +|+
T Consensus 28 ~~~i~l~~~~p~~~~~~~~~~a~~~~~~------------~~~~~Y~~~~g~~~lr~~ia~~l~~~~g--~~~~~~~~I~ 93 (387)
T PRK07683 28 DNLISLTIGQPDFPTPSHVKEAAKRAIT------------ENYTSYTHNAGLLELRKAACNFVKDKYD--LHYSPESEII 93 (387)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCcEE
Confidence 46799999976554 3555565555211 1245798889999999999999987666 557888 999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEE
Q 011801 116 MGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGL 195 (477)
Q Consensus 116 ~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~v 195 (477)
+|+|+++|+.+++.+++++||.|++++|+|+.+...++.. |+++++++.+. ++|.+|.+++++.+.+ +++++
T Consensus 94 ~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~~~~~~-~~~~~~~~~l~~~~~~------~~~~i 165 (387)
T PRK07683 94 VTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPIIRLC-GAKPVFIDTRS-TGFRLTAEALENAITE------KTRCV 165 (387)
T ss_pred EeCChHHHHHHHHHHhCCCCCEEEEcCCCccchHHHHHHc-CCEEEEeecCc-ccCCCCHHHHHHhcCc------CceEE
Confidence 9999999999999999999999999999999999888877 99999999874 5788899999887753 78999
Q ss_pred EEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCc
Q 011801 196 IITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGF 275 (477)
Q Consensus 196 ii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~ 275 (477)
+++|||||||.+++.+++++|+++|+++|++||+||+|+++.|+++ ..++.+..+ .++++++++||||.+|+||+
T Consensus 166 ~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~----~~~~vi~~~s~SK~~~~pGl 240 (387)
T PRK07683 166 VLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQP-HTSIAHFPE----MREKTIVINGLSKSHSMTGW 240 (387)
T ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCC-cCChhhccC----CcCCeEEEeeccccccCccc
Confidence 9999999999999999999999999999999999999998877654 345554422 35789999999999999999
Q ss_pred eEEEEEeCCHHHHHHHHHhcc--cCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCce
Q 011801 276 RVGIVYSFNDTVVNCGRKMSS--FGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAG 353 (477)
Q Consensus 276 RvG~i~~~~~~i~~~~~~~~~--~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g 353 (477)
|+||++++++.+.. +.+... ...++++.|.++..+|.+++ .++++.+++++++++.+.+.|.+.|+.+.++++|
T Consensus 241 RiG~i~~~~~l~~~-~~~~~~~~~~~~~~~~q~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 316 (387)
T PRK07683 241 RIGFLFAPSYLAKH-ILKVHQYNVTCASSISQYAALEALTAGK---DDAKMMRHQYKKRRDYVYNRLISMGLDVEKPTGA 316 (387)
T ss_pred eeEEEEcCHHHHHH-HHHHHHhccCCCChHHHHHHHHHHhCCh---HHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCee
Confidence 99999996654443 333222 33467889999999998753 3567778889999999999999989888899999
Q ss_pred EEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhh
Q 011801 354 LFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 354 ~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~ 426 (477)
+|+|+.++... ..+.++...+++++||.|.||+.|+..++++|||+++. +++++.+++++|++++++
T Consensus 317 ~~~~~~~~~~~-----~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~~-~~~~~~~al~~l~~~l~~ 383 (387)
T PRK07683 317 FYLFPSIGHFT-----MSSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYAY-SIETLKEGLDRLEAFLQQ 383 (387)
T ss_pred EEEEEecccCC-----CCHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHh
Confidence 99999987421 11225667778888999999999987667899999996 899999999999999865
No 45
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=1.5e-48 Score=397.87 Aligned_cols=350 Identities=21% Similarity=0.335 Sum_probs=287.3
Q ss_pred cccccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCC-cEE
Q 011801 38 GGVIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPD-RIV 115 (477)
Q Consensus 38 ~~~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~-~i~ 115 (477)
.++|+|+.+++.++ ++.+.+.+.+.-. .....|++..|.+++|+++++++.+.+| +..+++ +|+
T Consensus 30 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~G~~~lr~~~a~~l~~~~~--~~~~~~~~i~ 95 (386)
T PRK09082 30 HGAINLSQGFPDFDGPPYLVEALAYAMA------------AGHNQYPPMTGVAALREAIAAKTARLYG--RQYDADSEIT 95 (386)
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHH------------cCCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCCCCCcEE
Confidence 35799999887764 3555555554210 1235798889999999999999988776 445665 899
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEE
Q 011801 116 MGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGL 195 (477)
Q Consensus 116 ~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~v 195 (477)
+|+|+++|+..++.+++++||+|++++|+|+.+...++.. |.++++++++. .+|.+|++++++++++ ++++|
T Consensus 96 ~t~G~~~al~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~-g~~~~~~~~~~-~~~~~d~~~l~~~~~~------~~~~v 167 (386)
T PRK09082 96 VTAGATEALFAAILALVRPGDEVIVFDPSYDSYAPAIELA-GGRAVRVALQP-PDFRVDWQRFAAAISP------RTRLI 167 (386)
T ss_pred EeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhhHHHHHHc-CCEEEEEecCc-ccccCCHHHHHHhcCc------cceEE
Confidence 9999999999999999999999999999999999988877 99999999874 3689999999988854 78999
Q ss_pred EEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCc
Q 011801 196 IITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGF 275 (477)
Q Consensus 196 ii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~ 275 (477)
++++||||||.+++.+++++|+++|+++++++|+||+|.++.|++..+.++..... ..+++++++||||.+|+||+
T Consensus 168 ~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~----~~~~~i~~~S~SK~~~~~G~ 243 (386)
T PRK09082 168 ILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPE----LRERAFVVSSFGKTYHVTGW 243 (386)
T ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcC----ccCcEEEEeechhhccchhh
Confidence 99999999999999999999999999999999999999998887655566655432 35789999999999999999
Q ss_pred eEEEEEeCCHHHHHHHHHhc--ccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCce
Q 011801 276 RVGIVYSFNDTVVNCGRKMS--SFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAG 353 (477)
Q Consensus 276 RvG~i~~~~~~i~~~~~~~~--~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g 353 (477)
|+||++++++ +...+++.. ....++.+.|.+++.++... +.++++.++.++++++.+.+.|++.|+++.++++|
T Consensus 244 RiG~iv~~~~-l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~g~ 319 (386)
T PRK09082 244 KVGYCVAPAA-LSAEFRKVHQYNTFTVNTPAQLALADYLRAE---PEHYLELPAFYQAKRDRFRAALANSRFKLLPCEGT 319 (386)
T ss_pred hhhhhhCCHH-HHHHHHHHHhhhcCCCChHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCee
Confidence 9999999755 444444332 22347889999999999732 34577788899999999999999999999899999
Q ss_pred EEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCC--CCCCEEEEEeccCCHHHHHHHHHHHHH
Q 011801 354 LFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQC--TEPGWFRVCFANMDDDTLQVALNRIAA 422 (477)
Q Consensus 354 ~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~--~~~~~~Rl~~~~~~~e~l~~~l~~l~~ 422 (477)
+|+|++++.... . +..+++..+++++||.+.||+.|+. .++++||+|++. +++++++++++|++
T Consensus 320 ~~~~~~~~~~~~---~-~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~~-~~~~l~~~~~rl~~ 385 (386)
T PRK09082 320 YFQLVDYSAISD---L-DDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFAK-QEETLDAAAERLCQ 385 (386)
T ss_pred EEEEEeccccCC---C-CHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEecC-CHHHHHHHHHHHhh
Confidence 999999984211 1 1236778888889999999999863 346799999996 89999999999975
No 46
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=1.6e-47 Score=392.62 Aligned_cols=359 Identities=21% Similarity=0.345 Sum_probs=281.8
Q ss_pred ccccccccc-cccc---cHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCc
Q 011801 38 GGVIQLGLA-ENQL---CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDR 113 (477)
Q Consensus 38 ~~~i~l~~~-~n~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~ 113 (477)
.++|+|+.+ ++++ +++.+.+.+.+. ......|++..|.++||+++|+|+.+... ..+++++
T Consensus 33 ~~~i~l~~g~p~~~~~~~~~~i~~~~~~~-------------~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~--~~~~~~~ 97 (404)
T PRK09265 33 HKILKLNIGNPAPFGFEAPDEILRDVIRN-------------LPTAQGYSDSKGLFSARKAIMQYYQQKGI--PDVDVDD 97 (404)
T ss_pred CCeEEecCCCCCcCCCCCCHHHHHHHHHH-------------hhcCCCCCCCCCcHHHHHHHHHHHhccCC--CCCCccc
Confidence 467999885 3332 233344433331 11345799999999999999999975322 2478999
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCee
Q 011801 114 IVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIK 193 (477)
Q Consensus 114 i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k 193 (477)
|++|+|+++++.+++.+++++||.|++++|+|+.+...++.. |.+++.++++.+++|.+|++++++++.+ +++
T Consensus 98 i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~v~~~~~~~~~~~~d~~~l~~~~~~------~~~ 170 (404)
T PRK09265 98 IYIGNGVSELIVMAMQALLNNGDEVLVPAPDYPLWTAAVSLS-GGKPVHYLCDEEAGWFPDLDDIRSKITP------RTK 170 (404)
T ss_pred EEEeCChHHHHHHHHHHhCCCCCEEEEeCCCCcChHHHHHHc-CCEEEEEecccccCCCCCHHHHHHhccc------cce
Confidence 999999999999999999999999999999999999888876 9999999887666789999999988753 789
Q ss_pred EEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCC
Q 011801 194 GLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLP 273 (477)
Q Consensus 194 ~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~ 273 (477)
+|+++|||||||.+++.+++++|+++|+++|++||+||+|.++.|++..+.++..+. ...++++++||||.+|+|
T Consensus 171 ~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-----~~~~vi~~~S~SK~~~~p 245 (404)
T PRK09265 171 AIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLA-----PDLLCVTFNGLSKAYRVA 245 (404)
T ss_pred EEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcC-----CCceEEEEecchhhccCc
Confidence 999999999999999999999999999999999999999999888765556665542 224689999999999999
Q ss_pred CceEEEEEeC-CHH----HHHHHHHhc-ccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCe
Q 011801 274 GFRVGIVYSF-NDT----VVNCGRKMS-SFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GIN 346 (477)
Q Consensus 274 G~RvG~i~~~-~~~----i~~~~~~~~-~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~ 346 (477)
|+|+||++++ +.. +.+.+.... ....++.++|.++..+|.+.+..+.+++. .+++.++++.+.+.|+++ |++
T Consensus 246 GlRiG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~-~~~~~~~r~~~~~~L~~~~~~~ 324 (404)
T PRK09265 246 GFRVGWMVLSGPKKHAKGYIEGLDMLASMRLCANVPAQHAIQTALGGYQSINELILP-GGRLYEQRDRAWELLNAIPGVS 324 (404)
T ss_pred ccceEEEEEeCchHHHHHHHHHHHHHhccccCCCcHHHHHHHHHhcCchhHHHHHHH-HHHHHHHHHHHHHHHhcCCCCc
Confidence 9999999963 332 222222221 22347889999999999765443444433 346777889999999887 888
Q ss_pred EecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhh
Q 011801 347 CLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 347 ~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~ 426 (477)
+..+++|+|+|++++..... ...+.+++..++.++||.|.||+.|++..++|+|++++ .+++++++++++|++++++
T Consensus 325 ~~~p~~g~~l~~~~~~~~~~--~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~-~~~e~l~~~l~rl~~~l~~ 401 (404)
T PRK09265 325 CVKPKGALYAFPKLDPKVYP--IHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTL-PRVDDLEEAIGRIGRFLSG 401 (404)
T ss_pred ccCCCcceEEEEEecccccC--CCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeC-CCHHHHHHHHHHHHHHHHH
Confidence 88899999999999853211 11123455667778899999999998767889999996 5899999999999999976
Q ss_pred h
Q 011801 427 D 427 (477)
Q Consensus 427 ~ 427 (477)
+
T Consensus 402 ~ 402 (404)
T PRK09265 402 Y 402 (404)
T ss_pred h
Confidence 4
No 47
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-47 Score=391.83 Aligned_cols=353 Identities=18% Similarity=0.349 Sum_probs=287.5
Q ss_pred cccccccccccc-cHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccC-CCcEEE
Q 011801 39 GVIQLGLAENQL-CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFD-PDRIVM 116 (477)
Q Consensus 39 ~~i~l~~~~n~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~-~~~i~~ 116 (477)
++++|+.+++++ +++.+.+++++.-.. .....|++..|.+++|+++++++.+..| +.++ +++|++
T Consensus 28 ~~~~l~~g~~~~~~~~~~~~a~~~~~~~-----------~~~~~Y~~~~G~~~lr~~~~~~l~~~~g--~~~~~~~~i~~ 94 (389)
T PRK05957 28 GTISLGQGVVSYPPPPEAIEALNNFLAN-----------PENHKYQAVQGIPPLLEAITQKLQQDNG--IELNNEQAIVV 94 (389)
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHhC-----------CCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCeEEE
Confidence 579999999876 445566666553110 1235799899999999999999987766 4455 678999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEE
Q 011801 117 GGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLI 196 (477)
Q Consensus 117 t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vi 196 (477)
|+|+++++..++..++++||.|++++|+|..+...++.. |++++.++.+ ++|.+|++++++++++ ++|+|+
T Consensus 95 t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~-g~~~~~v~~~--~~~~~d~~~l~~~i~~------~~klv~ 165 (389)
T PRK05957 95 TAGSNMAFMNAILAITDPGDEIILNTPYYFNHEMAITMA-GCQPILVPTD--DNYQLQPEAIEQAITP------KTRAIV 165 (389)
T ss_pred eCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHHhc-CCEEEEeecC--CCCCcCHHHHHHhcCc------CceEEE
Confidence 999999999999999999999999999999988777766 9999999875 4678999999998854 789999
Q ss_pred EeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCce
Q 011801 197 ITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFR 276 (477)
Q Consensus 197 i~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~R 276 (477)
++|||||||.+++.+++++|+++|+++|++||+||+|.++.|+...+.+.....+ ...++++++||||.+|+||+|
T Consensus 166 ~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~----~~~~~i~~~S~SK~~g~~GlR 241 (389)
T PRK05957 166 TISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPG----SGNHTISLYSLSKAYGFASWR 241 (389)
T ss_pred EeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCC----ccCcEEEEecchhhccCccce
Confidence 9999999999999999999999999999999999999998887644445444322 346899999999999999999
Q ss_pred EEEEEeCCHHHHHHHHHhcc--cCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-C-CeEecCCc
Q 011801 277 VGIVYSFNDTVVNCGRKMSS--FGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-G-INCLKSNA 352 (477)
Q Consensus 277 vG~i~~~~~~i~~~~~~~~~--~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-g-i~~~~~~~ 352 (477)
+||++++++ +.+.+..... ...++.++|.++..+|+++. .++++.++.++++++.+.+.|++. + +.+.++++
T Consensus 242 iG~~~~~~~-~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~---~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~g 317 (389)
T PRK05957 242 IGYMVIPIH-LLEAIKKIQDTILICPPVVSQYAALGALQVGK---SYCQQHLPEIAQVRQILLKSLGQLQDRCTLHPANG 317 (389)
T ss_pred eEEEecCHH-HHHHHHHHHhhcccCCCcHHHHHHHHHHhCCh---HHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCe
Confidence 999999665 4444443332 23466789999999998742 235666677899999999999887 5 36778899
Q ss_pred eEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhhh
Q 011801 353 GLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQQD 427 (477)
Q Consensus 353 g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~~ 427 (477)
|+|+|++++...+ +.++++.++++.||.|.||+.|+...++|+||+|+..+++++++++++|.++++++
T Consensus 318 g~~~~~~~~~~~~------~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~l~~~~~~l~~~~~~~ 386 (389)
T PRK05957 318 AFYCFLKVNTDLN------DFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGALQKATAKEGIERLVQGLKTI 386 (389)
T ss_pred eEEEEEeCCCCCC------hHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHHhh
Confidence 9999999975332 34688888887899999999997666679999998778999999999999998763
No 48
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.3e-48 Score=399.75 Aligned_cols=357 Identities=18% Similarity=0.274 Sum_probs=273.8
Q ss_pred ccccccccccccccH-HHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcc-cCCCCccC-CCcE
Q 011801 38 GGVIQLGLAENQLCF-DLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKG-RGGRVTFD-PDRI 114 (477)
Q Consensus 38 ~~~i~l~~~~n~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~-~g~~~~~~-~~~i 114 (477)
.++|+++.++..+++ +.+.++.... .. .+|+++.|.+++|++|++++.+. .+...... +++|
T Consensus 100 ~~~i~l~~g~p~~~~~~~v~e~~~~~--------------~~-~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I 164 (527)
T PRK09275 100 RDAVSYVRDQLGFDADEFVYELVDGI--------------IG-DNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDL 164 (527)
T ss_pred HHHHhhcCCCCCCCCCHHHHHHHHHH--------------hc-CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeE
Confidence 357899988877754 5566655432 11 36999999999999999965443 22222222 3589
Q ss_pred EEeCChHHHHHHHHHH-----hcCCCCeEEEcCCCccchHHHHhhh-CCcEEEEEeccCCCCcccCHHHHHHHHHHHHHh
Q 011801 115 VMGGGATGANELIMFC-----LANPGDAFLVPSPYYAAFDRDLSWR-TGVQIVPVHCDISNNFKITREALEAAYERAQEA 188 (477)
Q Consensus 115 ~~t~G~t~al~~i~~~-----l~~~Gd~vlv~~P~y~~~~~~~~~~-~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~ 188 (477)
++|+|+++|+..++.+ +++|||.|++++|+|+.|...++.. .|.++++++++++++|++|.+++++++.+
T Consensus 165 ~vT~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~---- 240 (527)
T PRK09275 165 FAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRDP---- 240 (527)
T ss_pred EEeCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCC----
Confidence 9999999999999886 6899999999999999999887654 24666777766667899999999987643
Q ss_pred CCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHh--cCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecC
Q 011801 189 SINIKGLIITNPSNPLGTTLDRDTLKSLVSFIND--KNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSL 266 (477)
Q Consensus 189 ~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~--~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~Sl 266 (477)
++|+|+++|||||||.+++.+++++|+++|++ ++++||+||+|..+.+ .+.++... .++++++++||
T Consensus 241 --~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~---~~~s~~~~------~~~~~I~v~Sf 309 (527)
T PRK09275 241 --SIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVD---DFRSLFAV------LPYNTILVYSF 309 (527)
T ss_pred --CCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcc---cccCHHHh------CCCCEEEEeeh
Confidence 89999999999999999999999999999964 5999999999997643 34555443 34789999999
Q ss_pred CcccCCCCceEEEEEeCCHHHHHH-H-----------------------------------HHhcc--cCCCchHHHHH-
Q 011801 267 SKDMGLPGFRVGIVYSFNDTVVNC-G-----------------------------------RKMSS--FGLVSSQTQYL- 307 (477)
Q Consensus 267 SK~~g~~G~RvG~i~~~~~~i~~~-~-----------------------------------~~~~~--~~~vs~~~q~~- 307 (477)
||.||++|+|+||++++++.+.+. + +++.. ...+|++.|.+
T Consensus 310 SK~f~mtG~RlG~i~~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~ 389 (527)
T PRK09275 310 SKYFGATGWRLGVIALHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQM 389 (527)
T ss_pred hhhccCcHhHHhhhhcCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHH
Confidence 999999999999999987632211 1 12221 12356677775
Q ss_pred ----HHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchhh---ccCc-------hHHH
Q 011801 308 ----LASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLK---EKTL-------EGEI 373 (477)
Q Consensus 308 ----~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~---~~~~-------~~e~ 373 (477)
+.++|... +.++++.++.+++|++.+.+.|. .++.+.++++++|+|++++.... ...+ .++.
T Consensus 390 al~~~~all~~~---~~~~~~~~~~~~~Rr~~l~~~Lg-~~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~ 465 (527)
T PRK09275 390 ALFSLFALLDEE---DAYKKAMKDIIRRRYKALYEGLG-LPEPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPV 465 (527)
T ss_pred HHHHHHHHHhCc---hHHHHHHHHHHHHHHHHHHHHcC-CCCcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHH
Confidence 33445443 45688889999999999988882 23444578999999999985321 0111 1245
Q ss_pred HHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhhhhc
Q 011801 374 ALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQQDKE 429 (477)
Q Consensus 374 ~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~~~~ 429 (477)
+++.+++++.||.+.||+.|+. .++++|+|+++.+++++.++++||+++++++.+
T Consensus 466 ~f~~~Ll~e~gV~v~PG~~Fg~-~~~~vRis~a~~~~~~~~~~~~rl~~~l~~y~~ 520 (527)
T PRK09275 466 DLLFRLAEETGVVLLPGGGFGG-PEWSVRVSLANLNEEDYAKIGKAIRKLLDEYYE 520 (527)
T ss_pred HHHHHHHhcCCEEEeCchhhCC-CCCeEEEEEecCCHHHHHHHHHHHHHHHHHHHH
Confidence 7999999999999999999985 467899999988999999999999999988764
No 49
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=3.9e-47 Score=389.52 Aligned_cols=359 Identities=21% Similarity=0.371 Sum_probs=289.6
Q ss_pred cccccccccccc-----ccHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCC
Q 011801 38 GGVIQLGLAENQ-----LCFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPD 112 (477)
Q Consensus 38 ~~~i~l~~~~n~-----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ 112 (477)
.++|+|+.+... .+++.+.+.+.+.-.. .....|++..|.+++|+++|++++...+ +.++++
T Consensus 31 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~-----------~~~~~Y~~~~g~~~lr~~ia~~l~~~~~--~~~~~~ 97 (403)
T TIGR01265 31 KPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRS-----------GKFNGYAPSVGALAAREAVAEYLSSDLP--GKLTAD 97 (403)
T ss_pred CCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhc-----------CCCCCCCCCCCCHHHHHHHHHHHHhhcC--CCCCHH
Confidence 467999988752 3445555555442110 1234798889999999999999986555 456789
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCe
Q 011801 113 RIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINI 192 (477)
Q Consensus 113 ~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~ 192 (477)
+|++|+|+++|+.+++.+++++||.|+++.|+|+.+...+... |++++.++++..++|.+|++++++++.+ ++
T Consensus 98 ~ii~t~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~ 170 (403)
T TIGR01265 98 DVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYDTRAAFS-GLEVRLYDLLPEKDWEIDLDGLEALADE------KT 170 (403)
T ss_pred HEEEecChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHc-CCEEEEecCCcccCCccCHHHHHHHhCc------Cc
Confidence 9999999999999999999999999999999999998887776 9999999887666789999999987753 68
Q ss_pred eEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCC
Q 011801 193 KGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGL 272 (477)
Q Consensus 193 k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~ 272 (477)
+++++++||||||.+++.+++++|+++|+++|++||+||+|+++.|++..+.++..+. ...++++++||||.|++
T Consensus 171 ~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-----~~~~vi~~~S~SK~~~~ 245 (403)
T TIGR01265 171 VAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFA-----SIVPVLSLGGISKRWVV 245 (403)
T ss_pred cEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhc-----cCCcEEEEeecccccCC
Confidence 8999999999999999999999999999999999999999999888776666666553 23569999999999999
Q ss_pred CCceEEEEEeCC--HH----HHHHHHHhc-ccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-C
Q 011801 273 PGFRVGIVYSFN--DT----VVNCGRKMS-SFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-G 344 (477)
Q Consensus 273 ~G~RvG~i~~~~--~~----i~~~~~~~~-~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-g 344 (477)
||+|+||+++++ +. +...+.+.. ....++.++|.++..+|.+.. +.++++.+++++++++.+.+.|+.. |
T Consensus 246 pGlRiG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~ 323 (403)
T TIGR01265 246 PGWRLGWIIIHDPHGIFRDTVLQGLKNLLQRILGPATIVQGALPDILENTP--QEFFDGKISVLKSNAELCYEELKDIPG 323 (403)
T ss_pred CcceEEEEEEeCchhhhHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHhCh--HHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 999999999853 22 222233332 234478899999999997632 5678888999999999999999987 7
Q ss_pred CeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHH
Q 011801 345 INCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFV 424 (477)
Q Consensus 345 i~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~ 424 (477)
+.+..+++|+|+|++++..... ...+..+++..+++++||.|.||+.|+ .++|+||||+. +++++++++++|++++
T Consensus 324 ~~~~~p~~g~f~~~~~~~~~~~-~~~~~~~~~~~l~~~~gv~v~pg~~f~--~~~~iRis~~~-~~~~l~~~l~~l~~~~ 399 (403)
T TIGR01265 324 LVCPKPEGAMYLMVKLELELFP-EIKDDVDFCEKLVREESVICLPGSAFG--LPNWVRITITV-PESMLEEACSRIKEFC 399 (403)
T ss_pred ceecCCCceeEEEEeccccccC-CCCCHHHHHHHHHHhCCEEEeCccccC--CCCeEEEEecC-CHHHHHHHHHHHHHHH
Confidence 8777789999999999753211 111234677888888899999999996 47899999995 7889999999999999
Q ss_pred hhh
Q 011801 425 QQD 427 (477)
Q Consensus 425 ~~~ 427 (477)
+++
T Consensus 400 ~~~ 402 (403)
T TIGR01265 400 ERH 402 (403)
T ss_pred Hhc
Confidence 653
No 50
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=3.1e-47 Score=389.33 Aligned_cols=357 Identities=20% Similarity=0.320 Sum_probs=284.3
Q ss_pred cccccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCC-cEE
Q 011801 38 GGVIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPD-RIV 115 (477)
Q Consensus 38 ~~~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~-~i~ 115 (477)
.++|+|+.+..... ++.+.+.+.+.... .....|++..|.++||+++++|+++.+| +.++++ +|+
T Consensus 29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~-----------~~~~~Y~~~~G~~~lr~aia~~~~~~~g--~~~~~~~~i~ 95 (395)
T PRK08175 29 EDIIDFSMGNPDGPTPPHIVEKLCEVAQR-----------PDTHGYSTSRGIPRLRRAISRWYQDRYD--VDIDPESEAI 95 (395)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhC-----------CCcCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCcEE
Confidence 46788887654332 23233333321110 1346799999999999999999987766 557777 799
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEE
Q 011801 116 MGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGL 195 (477)
Q Consensus 116 ~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~v 195 (477)
+|+|+++++.+++..+++|||+|++++|+|+.+...++.. |++++.++++.++. +.++++++++.. ..++++|
T Consensus 96 ~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~-g~~~~~v~~~~~~~---~~~~l~~~l~~~---~~~~~~v 168 (395)
T PRK08175 96 VTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIA-GAQVRSVPLVEGVD---FFNELERAIRES---YPKPKMM 168 (395)
T ss_pred EccCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHc-CCeEEEEecccCCC---cHHHHHHHHhhc---cCCceEE
Confidence 9999999999999999999999999999999988877766 99999999876544 367888777532 3478999
Q ss_pred EEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCc
Q 011801 196 IITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGF 275 (477)
Q Consensus 196 ii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~ 275 (477)
++++||||||.+++.+++++|+++|+++|++||+||+|.++.|++....++..+.. ..+++++++||||.||+||+
T Consensus 169 ~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~----~~~~~i~~~S~SK~~g~pGl 244 (395)
T PRK08175 169 ILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPG----AKDVAVEFFTLSKSYNMAGW 244 (395)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCC----cccCEEEEeeccccccCcch
Confidence 99999999999999999999999999999999999999988886654455544321 24678899999999999999
Q ss_pred eEEEEEeCCHHHHHHHHHhcc--cCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCce
Q 011801 276 RVGIVYSFNDTVVNCGRKMSS--FGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAG 353 (477)
Q Consensus 276 RvG~i~~~~~~i~~~~~~~~~--~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g 353 (477)
|+||++++++ +.+.+.+... ...+++++|.++..+|.+. +.++++.++.++++++.+.+.|++.|+.+..+.+|
T Consensus 245 RiG~~~~~~~-l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p~~g 320 (395)
T PRK08175 245 RIGFMVGNPE-LVSALARIKSYHDYGTFTPLQVAAIAALEGD---QQCVRDIAEQYKRRRDVLVKGLHEAGWMVEMPKAS 320 (395)
T ss_pred hheeeeCCHH-HHHHHHHHHhhcccCCCcHHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCEE
Confidence 9999998654 4444444432 2346677899888888653 45678889999999999999999999888888899
Q ss_pred EEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhh
Q 011801 354 LFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 354 ~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~ 426 (477)
+|+|++++..... .++.+++..+++++||.|.||+.|+..+++++|++++ .+++.+.+++++|++++++
T Consensus 321 ~~i~i~l~~~~~~---~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~-~~~~~~~~al~~l~~~l~~ 389 (395)
T PRK08175 321 MYVWAKIPEPYAA---MGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALI-ENRDRIRQAIRGIKAMFRA 389 (395)
T ss_pred EEEEEECCcccCC---CCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeC-CCHHHHHHHHHHHHHHHHh
Confidence 9999999864321 1234678888888899999999998666789999998 4899999999999999974
No 51
>PRK07324 transaminase; Validated
Probab=100.00 E-value=2.5e-47 Score=386.77 Aligned_cols=344 Identities=22% Similarity=0.299 Sum_probs=283.5
Q ss_pred CCcccccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcE
Q 011801 36 NPGGVIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRI 114 (477)
Q Consensus 36 ~~~~~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i 114 (477)
..+++++|+++|.... ++.++.+..... .....|++..|.++||++||++++. +++++|
T Consensus 24 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~-------------~~~~~Y~~~~G~~~lr~~ia~~~~~-------~~~~~v 83 (373)
T PRK07324 24 AESCIDSLTLEELLALAGKNPEAFYQELG-------------QKKLTYGWIEGSPEFKEAVASLYQN-------VKPENI 83 (373)
T ss_pred ccCCCCCCcHHHHHhccCcchHHHHHHHh-------------cCCccCCCCCCCHHHHHHHHHHhcC-------CChhhE
Confidence 3567999999987554 233432322211 1234799999999999999999862 578999
Q ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeE
Q 011801 115 VMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKG 194 (477)
Q Consensus 115 ~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~ 194 (477)
++|+|+++|+.+++.+++++||.|+++.|+|+.+...++.. |++++.++++.+++|.+|++++++++.+ ++|+
T Consensus 84 i~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~-g~~v~~v~~~~~~~~~~d~~~l~~~~~~------~~kl 156 (373)
T PRK07324 84 LQTNGATGANFLVLYALVEPGDHVISVYPTYQQLYDIPESL-GAEVDYWQLKEENGWLPDLDELRRLVRP------NTKL 156 (373)
T ss_pred EEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHc-CCEEEEEecccccCCCCCHHHHHHhCCC------CCcE
Confidence 99999999999999999999999999999999998888776 9999999998777899999999887643 7899
Q ss_pred EEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCC
Q 011801 195 LIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPG 274 (477)
Q Consensus 195 vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G 274 (477)
|++++||||||.+++.+++++|+++|+++|++||+||+|.++.++.. +.++.+. .+++++++||||.+|+||
T Consensus 157 i~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~-~~s~~~~-------~~~~I~~~s~SK~~~~~G 228 (373)
T PRK07324 157 ICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGS-TPSIADL-------YEKGISTNSMSKTYSLPG 228 (373)
T ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCC-CCChhhc-------cCCEEEEecchhhcCCcc
Confidence 99999999999999999999999999999999999999998877543 4454432 357899999999999999
Q ss_pred ceEEEEEeCCHHHHHHHHHhccc--CCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEecCC
Q 011801 275 FRVGIVYSFNDTVVNCGRKMSSF--GLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLKSN 351 (477)
Q Consensus 275 ~RvG~i~~~~~~i~~~~~~~~~~--~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~~~ 351 (477)
+|+||++++ +.+.+.+++...+ ..++.++|.++..+|.+. +.++++.++.++++++.+.+.|++. ++.+..|+
T Consensus 229 ~RiG~i~~~-~~li~~~~~~~~~~~~~~~~~~q~~a~~~l~~~---~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~ 304 (373)
T PRK07324 229 IRVGWIAAN-EEVIDILRKYRDYTMICAGVFDDMLASLALEHR---DAILERNRKIVRTNLAILDEWVAKEPRVSYVKPK 304 (373)
T ss_pred ceeEEEecC-HHHHHHHHHHhCcEEecCChHHHHHHHHHHcCH---HHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCC
Confidence 999999995 5555555554432 346778999988888753 4567888889999999999999887 77888899
Q ss_pred ceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhhh
Q 011801 352 AGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQQD 427 (477)
Q Consensus 352 ~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~~ 427 (477)
+|+|+|+.++... +..+++.++++++||.|.||+.|+. ++|+||+++. +++.+++++++|+++++++
T Consensus 305 gg~~~~i~~~~~~------~~~~~~~~ll~~~gv~v~pg~~F~~--~~~iRis~~~-~~~~l~~~l~rl~~~l~~~ 371 (373)
T PRK07324 305 AVSTSFVKLDVDM------PSEDFCLKLLKETGVLLVPGNRFDL--EGHVRIGYCC-DTETLKKGLKKLSEFLREF 371 (373)
T ss_pred ceEEEEEEeCCCC------CHHHHHHHHHHhcCEEEECccccCC--CCeEEEEecC-CHHHHHHHHHHHHHHHHhc
Confidence 9999898887421 2236888888888999999999974 6799999986 7899999999999999764
No 52
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=6e-47 Score=386.23 Aligned_cols=352 Identities=21% Similarity=0.303 Sum_probs=285.0
Q ss_pred cccccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEE
Q 011801 38 GGVIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVM 116 (477)
Q Consensus 38 ~~~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~ 116 (477)
.+.|+|+.++++.. .+.+.+.+.+.-. -.....|++..|.++||+++|+++++.+| ..+++++|++
T Consensus 29 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g--~~~~~~~i~~ 95 (386)
T PRK07550 29 GPLIDLSQAVPGYPPPPELLRALAEAAA-----------DPAAHLYGPVEGLPELREAYAAHYSRLYG--AAISPEQVHI 95 (386)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHh-----------CcCCcCCCCCCCCHHHHHHHHHHHHHHhC--CCCCcceEEE
Confidence 35799999998774 3455555544210 01345798888999999999999998776 4577899999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEE
Q 011801 117 GGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLI 196 (477)
Q Consensus 117 t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vi 196 (477)
|+|+++|+.+++.+++++||+|+++.|+|+.+...++.. |++++++++++++++.+|.+++++++++ ++++|+
T Consensus 96 t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~~~~~l~~~~~~------~~~~v~ 168 (386)
T PRK07550 96 TSGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKMWLDML-GIRPVYLPCDEGPGLLPDPAAAEALITP------RTRAIA 168 (386)
T ss_pred ecCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhc-CCEEEEEecCCCcCCCCCHHHHHHHhcc------cCcEEE
Confidence 999999999999999999999999999999998888876 9999999998667888999999998864 788999
Q ss_pred EeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCce
Q 011801 197 ITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFR 276 (477)
Q Consensus 197 i~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~R 276 (477)
+++||||||.+++.+++++|+++|+++|++||+||+|+++.+......+...... ..+++++++||||.+|+||+|
T Consensus 169 ~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~----~~~~~i~~~S~SK~~g~~G~R 244 (386)
T PRK07550 169 LVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPD----WDDTLVHLYSFSKSYALTGHR 244 (386)
T ss_pred EeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCC----ccccEEEEecchhhccCcccc
Confidence 9999999999999999999999999999999999999987554322223222111 246789999999999999999
Q ss_pred EEEEEeCCHHHHHHHHHhcc-cCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEecCCceE
Q 011801 277 VGIVYSFNDTVVNCGRKMSS-FGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLKSNAGL 354 (477)
Q Consensus 277 vG~i~~~~~~i~~~~~~~~~-~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~~~~g~ 354 (477)
+||++++++.+....+.... ...++.++|.++..++++ + ++++++.++.++++++.+.+.|.+. ++.+ .+.+|+
T Consensus 245 iG~i~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~--~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~g~~ 320 (386)
T PRK07550 245 VGAVVASPARIAEIEKFMDTVAICAPRIGQIAVAWGLPN--L-ADWRAGNRAEIARRRDAFRAVFARLPGWEL-LASGAY 320 (386)
T ss_pred eEeeecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHhcc--H-HHHHHHHHHHHHHHHHHHHHHHHhCCCcee-CCCceE
Confidence 99999976554444333322 234678999999999976 2 5677888889999999999999886 6654 356889
Q ss_pred EEEeeccc-hhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHH
Q 011801 355 FFWMDLRH-LLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAF 423 (477)
Q Consensus 355 ~~~~~l~~-~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~ 423 (477)
|+|++++. ..+ ..+++..+++++||.|.||+.|+...++++||+++..+++++++++++|++|
T Consensus 321 ~~~~~~~~~~~~------~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 321 FAYVRHPFPDRP------SREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFANADVAGIGELVERLRAF 384 (386)
T ss_pred EEEecCCCCCCC------HHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeecCCHHHHHHHHHHHHhh
Confidence 99999874 222 2357788888889999999999765578999999977899999999999886
No 53
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=5.6e-47 Score=387.91 Aligned_cols=354 Identities=21% Similarity=0.367 Sum_probs=284.1
Q ss_pred Cccccccccccc---cc-cHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCC
Q 011801 37 PGGVIQLGLAEN---QL-CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPD 112 (477)
Q Consensus 37 ~~~~i~l~~~~n---~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ 112 (477)
+.++|+|+.+.. .+ +++.+.+.+.+.-. .....|++..|.++||+++|+|+++.+| +.++++
T Consensus 29 ~~~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~------------~~~~~Y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~ 94 (398)
T PRK08363 29 GIKVIRLNIGDPVKFDFQPPEHMKEAYCRAIK------------EGHNYYGPSEGLPELREAIVKREKRKNG--VDITPD 94 (398)
T ss_pred CCCeEEEeCCCCCcCCCCCCHHHHHHHHHHHH------------cCCCCCCCCCCcHHHHHHHHHHHHHhcC--CCCChh
Confidence 346899999886 34 44555555544210 1134688888999999999999987766 567899
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEE-eccCCCCcccCHHHHHHHHHHHHHhCCC
Q 011801 113 RIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPV-HCDISNNFKITREALEAAYERAQEASIN 191 (477)
Q Consensus 113 ~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v-~~~~~~~f~i~~~~l~~~~~~~~~~~~~ 191 (477)
+|++|+|+++|+.+++.+++++||.|++++|+|+.+...++.. |.+++.+ +.+ .++|.+|.+++++++.+ +
T Consensus 95 ~i~it~G~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~v~~~~~~-~~~~~~d~~~l~~~~~~------~ 166 (398)
T PRK08363 95 DVRVTAAVTEALQLIFGALLDPGDEILIPGPSYPPYTGLVKFY-GGVPVEYRTIE-EEGWQPDIDDIRKKITE------K 166 (398)
T ss_pred hEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHc-CCEEEEecccc-ccCCcCCHHHHHhhCCc------c
Confidence 9999999999999999999999999999999999999888876 9988888 444 35788999999888754 7
Q ss_pred eeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccC
Q 011801 192 IKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMG 271 (477)
Q Consensus 192 ~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g 271 (477)
+++|+++|||||||.+++.+++++|+++|+++|+++|+||+|.++.|++. +.++..+. ...++++++||||.|+
T Consensus 167 ~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~-~~~~~~~~-----~~~~vi~~~SfSK~~~ 240 (398)
T PRK08363 167 TKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGK-HVSPGSLT-----KDVPVIVMNGLSKVYF 240 (398)
T ss_pred eEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCc-ccCHHHcC-----cCCcEEEEecchhccC
Confidence 89999999999999999999999999999999999999999998877653 34544442 2357999999999999
Q ss_pred CCCceEEEEEe--CCHHHHHHHHHhc----ccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-C
Q 011801 272 LPGFRVGIVYS--FNDTVVNCGRKMS----SFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-G 344 (477)
Q Consensus 272 ~~G~RvG~i~~--~~~~i~~~~~~~~----~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-g 344 (477)
+||+|+||+++ +++.+......+. ..+.++.++|.++..+|.+. ++++++.+++++++++.+.+.|.+. +
T Consensus 241 ~~GlRiG~~~~~~~~~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~~---~~~l~~~~~~~~~~~~~l~~~L~~~~~ 317 (398)
T PRK08363 241 ATGWRLGYIYFVDPEGKLAEVREAIDKLARIRLCPNTPAQFAAIAGLTGP---MDYLEEYMKKLKERRDYIYKRLNEIPG 317 (398)
T ss_pred CccceEEEEEEeCcHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999997 4333322222221 12347889999999999752 4567788889999999999999887 7
Q ss_pred CeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHH
Q 011801 345 INCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFV 424 (477)
Q Consensus 345 i~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~ 424 (477)
+.+..+.+|+|+|++++... ...+.+++..++.++||.|.||+.|+..+++|+||||+ .+++++++++++|++++
T Consensus 318 ~~~~~p~g~~~~~~~l~~~~----~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~-~~~~~l~~~l~~l~~~~ 392 (398)
T PRK08363 318 ISTTKPQGAFYIFPRIEEGP----WKDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFL-PPVEILEEAMDRFEEFM 392 (398)
T ss_pred CEecCCCeEEEEEEEeccCC----CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec-CCHHHHHHHHHHHHHHH
Confidence 88888999999999988521 01123566777788899999999997666789999997 47899999999999998
Q ss_pred hh
Q 011801 425 QQ 426 (477)
Q Consensus 425 ~~ 426 (477)
++
T Consensus 393 ~~ 394 (398)
T PRK08363 393 RE 394 (398)
T ss_pred HH
Confidence 76
No 54
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=2.5e-47 Score=390.87 Aligned_cols=349 Identities=19% Similarity=0.296 Sum_probs=273.0
Q ss_pred Ccccccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEE
Q 011801 37 PGGVIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIV 115 (477)
Q Consensus 37 ~~~~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~ 115 (477)
..++|+|+.++++.+ ++.+.+.+.+.-... ..-.....|++..|.++||+++|+++.+. .+++++|+
T Consensus 32 ~~~~i~l~~~~~~~~~~~~v~~~~~~~~~~~-------~~~~~~~~Y~p~~g~~~lr~aia~~~~~~-----~~~~d~I~ 99 (402)
T TIGR03542 32 SADIIRLGIGDTTQPLPASVIEAFHNAVDEL-------ASEETFRGYGPEQGYPFLREAIAENDYRG-----RIDPEEIF 99 (402)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHhcc-------cccccccCCCCCCCCHHHHHHHHHHHHhc-----CCCHHHEE
Confidence 356899999998874 454555544421100 00012356888889999999999986431 26899999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCc-----------EEEEEeccCCCCcccCHHHHHHHHHH
Q 011801 116 MGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGV-----------QIVPVHCDISNNFKITREALEAAYER 184 (477)
Q Consensus 116 ~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~-----------~~~~v~~~~~~~f~i~~~~l~~~~~~ 184 (477)
+|+|+++++.+++ .++.+||.|++++|+|+.|...++.. |+ ++++++++..++|.++.++
T Consensus 100 it~Ga~~al~~l~-~l~~~gd~Vlv~~P~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~------- 170 (402)
T TIGR03542 100 ISDGAKCDVFRLQ-SLFGSDNTVAVQDPVYPAYVDSNVMA-GRAGVLDDDGRYSKITYLPCTKENNFIPDLPE------- 170 (402)
T ss_pred ECCCcHHHHHHHH-HhcCCCCEEEEeCCCCcchHHHHHHc-CCccccccccccceEEEeecchhhCCCCCccc-------
Confidence 9999999999875 55689999999999999999888876 99 9999998765667766422
Q ss_pred HHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEe
Q 011801 185 AQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIY 264 (477)
Q Consensus 185 ~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~ 264 (477)
..++++|+++|||||||++++.+++++|+++|++++++||+||+|.++.+++....++..+.. ..+++++++
T Consensus 171 ----~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~----~~~~vi~~~ 242 (402)
T TIGR03542 171 ----EPKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPG----AKECAIEFR 242 (402)
T ss_pred ----cCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCC----CcccEEEEe
Confidence 127899999999999999999999999999999999999999999988765533344444321 246789999
Q ss_pred cCCcccCCCCceEEEEEeCCHHH-------HHHH-HHh-cccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHH
Q 011801 265 SLSKDMGLPGFRVGIVYSFNDTV-------VNCG-RKM-SSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHN 335 (477)
Q Consensus 265 SlSK~~g~~G~RvG~i~~~~~~i-------~~~~-~~~-~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~ 335 (477)
||||.||+||+|+||++++++.+ .... .+. ..+..++.++|.++..++.+..+ .++.+.++.++++++.
T Consensus 243 SfSK~~g~pGlRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~--~~~~~~~~~~~~~~~~ 320 (402)
T TIGR03542 243 SFSKTAGFTGVRLGWTVVPKELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGL--QPILEAISYYMENARI 320 (402)
T ss_pred cCccccCCCCcceEEEEecHHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcch--hHHHHHHHHHHHHHHH
Confidence 99999999999999999976644 1222 222 33445788999999999987654 2455667888999999
Q ss_pred HHHHHhhCCCeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHH
Q 011801 336 FTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQV 415 (477)
Q Consensus 336 l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~ 415 (477)
+.+.|++.|+++.++.+|+|+|++++...+ ..+++..++++.||.|.||+.|+..+++|+||+++. +++++++
T Consensus 321 ~~~~L~~~~~~~~~~~~~~f~~v~l~~~~~------~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~l~~ 393 (402)
T TIGR03542 321 LRKALEAAGFKVYGGEHAPYLWVKTPEGIS------SWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAFG-KRENIVE 393 (402)
T ss_pred HHHHHHhcCceecCCCceeEEEEECCCCCC------HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHH
Confidence 999999989888888889999999985322 225788888888999999999977667899999875 8999999
Q ss_pred HHHHHHHH
Q 011801 416 ALNRIAAF 423 (477)
Q Consensus 416 ~l~~l~~~ 423 (477)
++++|+++
T Consensus 394 ~l~~l~~~ 401 (402)
T TIGR03542 394 ACERIKEA 401 (402)
T ss_pred HHHHHHhh
Confidence 99999875
No 55
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1e-46 Score=386.00 Aligned_cols=353 Identities=24% Similarity=0.441 Sum_probs=287.2
Q ss_pred cccccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEE
Q 011801 38 GGVIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVM 116 (477)
Q Consensus 38 ~~~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~ 116 (477)
.++|+|+.+++.++ ++.+.+.+.+.. .....|++..|.+++|+++|+++. .+| +.+++++|++
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~a~~~~~-------------~~~~~Y~~~~g~~~lr~~ia~~~~-~~~--~~~~~~~i~~ 93 (397)
T PRK07568 30 IKVYHLNIGQPDIKTPEVFFEAIKNYD-------------EEVLAYSHSQGIPELREAFAKYYK-KWG--IDVEPDEILI 93 (397)
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHh-------------cCCcCcCCCCCCHHHHHHHHHHHH-HhC--CCCCcceEEE
Confidence 36899999988764 455566555421 134579999999999999999998 344 4578999999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCccc-CHHHHHHHHHHHHHhCCCeeEE
Q 011801 117 GGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKI-TREALEAAYERAQEASINIKGL 195 (477)
Q Consensus 117 t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i-~~~~l~~~~~~~~~~~~~~k~v 195 (477)
|+|+++|+.+++..++++||.|++++|+|+.+...++.. |+++++++++.+++|.. +++++++++++ ++++|
T Consensus 94 t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~v~~~~~~g~~~~~~~~l~~~~~~------~~~~v 166 (397)
T PRK07568 94 TNGGSEAILFAMMAICDPGDEILVPEPFYANYNGFATSA-GVKIVPVTTKIEEGFHLPSKEEIEKLITP------KTKAI 166 (397)
T ss_pred cCChHHHHHHHHHHhcCCCCEEEEecCCCccHHHHHHHc-CCEEEEeecCcccCCCCCCHHHHHHhcCc------cceEE
Confidence 999999999999999999999999999999988877766 99999999875556664 57888887753 78899
Q ss_pred EEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCc
Q 011801 196 IITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGF 275 (477)
Q Consensus 196 ii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~ 275 (477)
+++||+||||.+++.+++++|+++|+++|++||+||+|.++.|++..+.++..+.. ..+++++++||||.+|+||+
T Consensus 167 ~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~----~~~~~i~~~S~SK~~~~~G~ 242 (397)
T PRK07568 167 LISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEG----LEDRVIIIDSVSKRYSACGA 242 (397)
T ss_pred EEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCC----CcCCEEEEecchhhccCCCc
Confidence 99999999999999999999999999999999999999998777655566555432 35789999999999999999
Q ss_pred eEEEEEeCCHHHHHHHHHh-cccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEecCCce
Q 011801 276 RVGIVYSFNDTVVNCGRKM-SSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLKSNAG 353 (477)
Q Consensus 276 RvG~i~~~~~~i~~~~~~~-~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~~~~g 353 (477)
|+||++++++.+...+.+. ...+.++.+.|.++..+|++. +.++++.++.++++++.+.+.|++. |+.+..+.+|
T Consensus 243 R~G~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~ 319 (397)
T PRK07568 243 RIGCLISKNKELIAAAMKLCQARLSPPTLEQIGAAALLDTP---ESYFDEVREEYKKRRDILYEELNKIPGVVCEKPKGA 319 (397)
T ss_pred ceEEEecCCHHHHHHHHHHhhccCCCCcHHHHHHHHHhhCC---HHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCcc
Confidence 9999999765555544332 223457889999999999764 3567888889999999999999887 7788888999
Q ss_pred EEEEeeccchhhccCchHHHHHHHHHHHh-----cCeEEeCCCCCCCC---CCCEEEEEeccCCHHHHHHHHHHHHHHHh
Q 011801 354 LFFWMDLRHLLKEKTLEGEIALWRTIVND-----VKLNVSPGSSFQCT---EPGWFRVCFANMDDDTLQVALNRIAAFVQ 425 (477)
Q Consensus 354 ~~~~~~l~~~~~~~~~~~e~~l~~~ll~~-----~gI~v~pg~~f~~~---~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~ 425 (477)
+|+|++++.. ...++.+.++++ .||.+.||+.|+.. +++++||+|+. +++++++++++|+++++
T Consensus 320 ~~~~~~l~~~-------~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~~-~~~~~~~~~~~l~~~l~ 391 (397)
T PRK07568 320 FYIIAKLPVD-------DAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYVL-NEEDLKRAMEILKEALE 391 (397)
T ss_pred eEEEEecCCC-------CHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEeC-CHHHHHHHHHHHHHHHH
Confidence 9999999742 122566667654 69999999998532 35799999984 78999999999999997
Q ss_pred hhh
Q 011801 426 QDK 428 (477)
Q Consensus 426 ~~~ 428 (477)
++.
T Consensus 392 ~~~ 394 (397)
T PRK07568 392 KYN 394 (397)
T ss_pred Hhh
Confidence 643
No 56
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-46 Score=359.15 Aligned_cols=355 Identities=20% Similarity=0.320 Sum_probs=306.2
Q ss_pred cccccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEE
Q 011801 38 GGVIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVM 116 (477)
Q Consensus 38 ~~~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~ 116 (477)
.++|-|-+++...+ ++.+.+++++.-+ ....+|+ .+..++.++|++|+.++++ ..++++.|++
T Consensus 25 ~DvlPmWVADMDf~~pp~i~~Al~~rvd------------hGvfGY~--~~~~~~~~ai~~w~~~r~~--~~i~~e~i~~ 88 (388)
T COG1168 25 EDVLPMWVADMDFPTPPEIIEALRERVD------------HGVFGYP--YGSDELYAAIAHWFKQRHQ--WEIKPEWIVF 88 (388)
T ss_pred CCcceeeeecccCCCCHHHHHHHHHHHh------------cCCCCCC--CCCHHHHHHHHHHHHHhcC--CCCCcceEEE
Confidence 46888888887764 5667777776422 1345666 4668899999999999988 4578999999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEecc-CCCCcccCHHHHHHHHHHHHHhCCCeeEE
Q 011801 117 GGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCD-ISNNFKITREALEAAYERAQEASINIKGL 195 (477)
Q Consensus 117 t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~-~~~~f~i~~~~l~~~~~~~~~~~~~~k~v 195 (477)
++|..-++..+++.|.+|||.|++.+|.|++|....+.. |.++++.|+- .++.|.+|.++||+++.+. ++|++
T Consensus 89 ~p~VVpgi~~~I~~~T~~gd~Vvi~tPvY~PF~~~i~~n-~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~-----~vkl~ 162 (388)
T COG1168 89 VPGVVPGISLAIRALTKPGDGVVIQTPVYPPFYNAIKLN-GRKVIENPLVEDDGRYEIDFDALEKAFVDE-----RVKLF 162 (388)
T ss_pred cCcchHhHHHHHHHhCcCCCeeEecCCCchHHHHHHhhc-CcEEEeccccccCCcEEecHHHHHHHHhcC-----CccEE
Confidence 999999999999999999999999999999999999887 9999999986 5577999999999999864 78999
Q ss_pred EEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCc
Q 011801 196 IITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGF 275 (477)
Q Consensus 196 ii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~ 275 (477)
++||||||||++++++||.+|.++|.+||+.||+||+++++++.+..+.+.+.+.+. ..++.+.+.|.||+|+++|+
T Consensus 163 iLCnPHNP~Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~---~a~~~it~~saSKtFNlaGL 239 (388)
T COG1168 163 ILCNPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSER---FADNSITLTSASKTFNLAGL 239 (388)
T ss_pred EEeCCCCCCCccccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChh---hhcceEEEeeccccccchhh
Confidence 999999999999999999999999999999999999999999999777777766442 35788999999999999999
Q ss_pred eEEEEEeCCHHHHHH-HHHh--cccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC--CCeEecC
Q 011801 276 RVGIVYSFNDTVVNC-GRKM--SSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV--GINCLKS 350 (477)
Q Consensus 276 RvG~i~~~~~~i~~~-~~~~--~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~--gi~~~~~ 350 (477)
.+++++.+++.+... .+++ .....+|.++..+..++..++ +.|+.+..+.++.+++++.+.|.+. ++++..|
T Consensus 240 ~~a~~Ii~n~~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~~G---~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~p 316 (388)
T COG1168 240 KCAYIIISNRELRAKFLKRLKRNGLHGPSALGIIATEAAYNQG---EPWLDELLEYLKDNRDYVADFLNKHLPGVKVTEP 316 (388)
T ss_pred hheeEEecCHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhc---hHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEecC
Confidence 999999999887443 3333 334557888888888888877 4679999999999999999999987 8999999
Q ss_pred CceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhh
Q 011801 351 NAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 351 ~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~ 426 (477)
+|.+.+|+|+++..-. +.++.+.++++.+|.+.+|..|+..+.|++|+++++ +.+.++++++||+..+++
T Consensus 317 ~gTYL~WLD~r~l~l~-----d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~ac-pr~~L~eal~ri~~al~~ 386 (388)
T COG1168 317 QGTYLAWLDCRELGLD-----DSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFAC-PRAILEEALERLKRALKK 386 (388)
T ss_pred CCceeeeeeccccCCC-----hHHHHHHHHHhhcEeccCCCccCcCCCceEEEecCC-CHHHHHHHHHHHHHHHhc
Confidence 9999999999975332 125778899999999999999999999999999996 999999999999998875
No 57
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=9.3e-47 Score=384.97 Aligned_cols=354 Identities=23% Similarity=0.364 Sum_probs=283.5
Q ss_pred cccccccccccccH-HHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCC-cEEE
Q 011801 39 GVIQLGLAENQLCF-DLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPD-RIVM 116 (477)
Q Consensus 39 ~~i~l~~~~n~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~-~i~~ 116 (477)
++|+|+.+....+. +.+.+.+.+.- ......|++..|.++||+++++++.+.+| +.++++ +|++
T Consensus 25 ~~i~l~~g~p~~~~~~~~~~~~~~~~------------~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~~~i~~ 90 (387)
T PRK07777 25 GAVNLGQGFPDEDGPPEMLEAAQEAI------------AGGVNQYPPGPGIPELRAAIAAQRRRRYG--LEYDPDTEVLV 90 (387)
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHH------------hcCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCcEEE
Confidence 67999887644322 22233332210 01235799989999999999999987776 446676 7999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCC-CCcccCHHHHHHHHHHHHHhCCCeeEE
Q 011801 117 GGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDIS-NNFKITREALEAAYERAQEASINIKGL 195 (477)
Q Consensus 117 t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~-~~f~i~~~~l~~~~~~~~~~~~~~k~v 195 (477)
|+|+++|+.+++.+++++||.|+++.|+|+.+...++.. |.+++++++++. ++|.+|++++++++.+ ++++|
T Consensus 91 t~G~~~al~~~~~~~~~~gd~vli~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~v 163 (387)
T PRK07777 91 TVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYAAVIAMA-GAHRVPVPLVPDGRGFALDLDALRAAVTP------RTRAL 163 (387)
T ss_pred eCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHC-CCEEEEeecCCccCCCcCCHHHHHHhcCc------ccEEE
Confidence 999999999999999999999999999999998888877 999999998765 4788999999988754 78999
Q ss_pred EEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCc
Q 011801 196 IITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGF 275 (477)
Q Consensus 196 ii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~ 275 (477)
+++|||||||.+++.+++++|+++|+++++++|+||+|.++.|.+..+.++..+.. ..+++++++||||.||+||+
T Consensus 164 ~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~----~~~~~i~~~S~SK~~g~~Gl 239 (387)
T PRK07777 164 IVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPG----MRERTVTISSAAKTFNVTGW 239 (387)
T ss_pred EEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCC----CcCcEEEEeechhhccCcCc
Confidence 99999999999999999999999999999999999999988886655555554321 24689999999999999999
Q ss_pred eEEEEEeCCHHHHHHHHHhcc--cCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCce
Q 011801 276 RVGIVYSFNDTVVNCGRKMSS--FGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAG 353 (477)
Q Consensus 276 RvG~i~~~~~~i~~~~~~~~~--~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g 353 (477)
|+||++++++. .+.+..... .+.++++.|.++..++.+. +.++++.++.++++++.+.+.|++.|+++.++++|
T Consensus 240 RiG~~~~~~~l-~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~g~ 315 (387)
T PRK07777 240 KIGWACGPAPL-IAAVRAAKQYLTYVGGAPFQPAVAHALDHE---DAWVAALRDSLQAKRDRLAAGLAEAGFEVHDSAGT 315 (387)
T ss_pred eeEEEecCHHH-HHHHHHHHhhcccCCCCHHHHHHHHHHhCC---cHHHHHHHHHHHHHHHHHHHHHHhCCCCccCCCcc
Confidence 99999996654 443333322 2346778898888888754 34677888899999999999999999998889999
Q ss_pred EEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCC---CCCEEEEEeccCCHHHHHHHHHHHHHHHhh
Q 011801 354 LFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCT---EPGWFRVCFANMDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 354 ~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~---~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~ 426 (477)
+|+|++++.... ....++++.+++++||.|.||+.|+.. .+++|||+|+. +++++++++++|++++.+
T Consensus 316 ~~~~~~~~~~~~----~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~-~~~~l~~~l~~l~~~~~~ 386 (387)
T PRK07777 316 YFLCADPRPLGY----DDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFCK-RDDTLDEAIRRLRALRGR 386 (387)
T ss_pred eEEEecccccCC----CCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEecC-CHHHHHHHHHHHHHHhcC
Confidence 999999863111 122468888888889999999998642 25699999986 899999999999988753
No 58
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=7.7e-47 Score=380.68 Aligned_cols=332 Identities=20% Similarity=0.345 Sum_probs=272.1
Q ss_pred ccccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEe
Q 011801 39 GVIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMG 117 (477)
Q Consensus 39 ~~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t 117 (477)
.+++|+.++|+.+ ++.+.+.+.+.. ..+..|++. +.++||+++|+|++ +++++|++|
T Consensus 20 ~~~~l~~~~~~~~~p~~~~~a~~~~~-------------~~~~~Y~~~-~~~~lr~~ia~~~~--------~~~~~i~it 77 (354)
T PRK06358 20 MILDFSANINPLGVPESLKQAITENL-------------DKLVEYPDP-DYLELRKRIASFEQ--------LDLENVILG 77 (354)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHH-------------HhhhcCCCc-cHHHHHHHHHHHhC--------CChhhEEEC
Confidence 3699999999875 355555555421 235679875 68999999999985 689999999
Q ss_pred CChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEE
Q 011801 118 GGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLII 197 (477)
Q Consensus 118 ~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii 197 (477)
+|+++++..+++++ .+ +.|++++|+|+.|...++.. |+++++++++.+++|.+| +++.+.+.+ ++++|++
T Consensus 78 ~Ga~~~l~~~~~~~-~~-~~v~i~~P~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~d-~~~~~~~~~------~~~~v~~ 147 (354)
T PRK06358 78 NGATELIFNIVKVT-KP-KKVLILAPTFAEYERALKAF-DAEIEYAELTEETNFAAN-EIVLEEIKE------EIDLVFL 147 (354)
T ss_pred CCHHHHHHHHHHHh-CC-CcEEEecCChHHHHHHHHHc-CCeeEEEeCccccCCCcc-HHHHHhhcc------CCCEEEE
Confidence 99999999999987 44 68999999999999888766 999999999876788999 666555432 6889999
Q ss_pred eCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceE
Q 011801 198 TNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRV 277 (477)
Q Consensus 198 ~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~Rv 277 (477)
+|||||||.+++.+++++|+++|++++++||+||+|.++.+++.. .+...... ..+++++++||||.+|+||+|+
T Consensus 148 ~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~-~~~~~~~~----~~~~vi~~~S~SK~~gl~G~Ri 222 (354)
T PRK06358 148 CNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENET-ISMINYLE----NFKNLIIIRAFTKFFAIPGLRL 222 (354)
T ss_pred eCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccc-hhHHHhcc----CCCCEEEEEechhhccCcchhh
Confidence 999999999999999999999999999999999999988776543 33333333 4578999999999999999999
Q ss_pred EEEEeCCHHHHHHHHHhcccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEecCCceEEE
Q 011801 278 GIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLKSNAGLFF 356 (477)
Q Consensus 278 G~i~~~~~~i~~~~~~~~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~~~~g~~~ 356 (477)
||++++++.+...+.+....+.++.++|.++..+|++.++ +++.++.++++++.+.+.|++. |+.+.++.+ .|+
T Consensus 223 G~lv~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~----~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g-~f~ 297 (354)
T PRK06358 223 GYGLTSNKNLAEKLLQMREPWSINTFADLAGQTLLDDKEY----IKKTIQWIKEEKDFLYNGLSEFKGIKVYKPSV-NFI 297 (354)
T ss_pred eeeecCCHHHHHHHHHhCCCCcchHHHHHHHHHHhccHHH----HHHHHHHHHHHHHHHHHHHhcCCCcEEcCCcc-eEE
Confidence 9999876666666655555566899999999999987543 6777788899999999999887 777777765 599
Q ss_pred EeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHH
Q 011801 357 WMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFV 424 (477)
Q Consensus 357 ~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~ 424 (477)
|++++.. .++++.+++ +||.|.||+.|+..+++|+||+++ ++++++++++.|++++
T Consensus 298 ~~~~~~~---------~~~~~~l~~-~gI~v~~~~~f~~~~~~~iRls~~--~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 298 FFKLEKP---------IDLRKELLK-KGILIRSCSNYRGLDENYYRVAVK--SREDNKKLLKALEVIL 353 (354)
T ss_pred EEEcCch---------HHHHHHHHH-CCeEEEECCCCCCCCCCEEEEEeC--CHHHHHHHHHHHHHHh
Confidence 9998742 257777775 599999999996555789999998 7899999999999876
No 59
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=7.3e-47 Score=390.86 Aligned_cols=324 Identities=26% Similarity=0.436 Sum_probs=279.3
Q ss_pred ccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCc
Q 011801 79 IAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGV 158 (477)
Q Consensus 79 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~ 158 (477)
...|.+..|.++||++|++++...+| +.+++++|++|+|+++|++++++.+++|||+|++++|+|.+....++.. |+
T Consensus 125 ~~~y~~~~G~~~LR~~ia~~l~~~~g--~~~~~~~IiiT~G~q~al~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~-g~ 201 (459)
T COG1167 125 ALQYGPTAGLPELREAIAAYLLARRG--ISCEPEQIVITSGAQQALDLLLRLLLDPGDTVLVEDPTYPGALQALEAL-GA 201 (459)
T ss_pred hhcCCCCCCcHHHHHHHHHHHHHhcC--CccCcCeEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHc-CC
Confidence 45788889999999999999997777 7788999999999999999999999999999999999999999999987 99
Q ss_pred EEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEe-CCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccc
Q 011801 159 QIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIIT-NPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATV 237 (477)
Q Consensus 159 ~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~-nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~ 237 (477)
++++||+|.+ ++|+++|++++++. ++|+++++ +-+||||.++|.++.++|+++|++|+++||+||+|+++.
T Consensus 202 ~~~~vp~d~~---G~~~e~le~~~~~~-----~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~ 273 (459)
T COG1167 202 RVIPVPVDED---GIDPEALEEALAQW-----KPKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELR 273 (459)
T ss_pred cEEecCCCCC---CCCHHHHHHHHhhc-----CCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhh
Confidence 9999999854 48999999999864 78876554 347999999999999999999999999999999999999
Q ss_pred cCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHH-HhcccCCCchHHHHHHHHhcCChh
Q 011801 238 FSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGR-KMSSFGLVSSQTQYLLASMLSDDE 316 (477)
Q Consensus 238 ~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~-~~~~~~~vs~~~q~~~~~~L~~~~ 316 (477)
|++.+..++..+. ..++|++++||||.+. ||+|+||++++++.+..... +......++.++|.+++.++.++.
T Consensus 274 ~~~~p~~~l~~ld-----~~~rViy~gSFSK~l~-PglRlG~vv~p~~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~~G~ 347 (459)
T COG1167 274 YDGPPPPPLKALD-----APGRVIYLGSFSKTLA-PGLRLGYVVAPPELIEKLLRLKQAADLGPSSLSQAALAAFLLSGH 347 (459)
T ss_pred cCCCCCCChHhhC-----CCCCEEEEeeehhhcc-cccceeeeeCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHcCC
Confidence 9877666666653 4689999999999996 99999999997765555443 333344588899999999999777
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhC---CCeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeC-CCC
Q 011801 317 FVDNFLVETSKRLAKRHHNFTKGLEQV---GINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSP-GSS 392 (477)
Q Consensus 317 ~~~~~~~~~~~~l~~r~~~l~~~L~~~---gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~p-g~~ 392 (477)
| ++++++.++.+++|++.+.+.|++. ++.+..+.+|+|+|++++...+. .++...+++ .||.+.| |..
T Consensus 348 ~-~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l~~~~~~------~~l~~~a~~-~gv~i~~~g~~ 419 (459)
T COG1167 348 Y-DRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLELPEGIDA------RELLAAALE-KGVVVTPLGSA 419 (459)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEEcCCCCCH------HHHHHHHHH-CCCEEEcCCcc
Confidence 7 9999999999999999999999987 36788899999999999976442 346666664 4999999 888
Q ss_pred CCCCC--CCEEEEEeccCCHHHHHHHHHHHHHHHhhh
Q 011801 393 FQCTE--PGWFRVCFANMDDDTLQVALNRIAAFVQQD 427 (477)
Q Consensus 393 f~~~~--~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~~ 427 (477)
|.... .++||++|+..+++++++++++|.+.+++.
T Consensus 420 f~~~~~~~~~~Rl~~s~~~~e~i~~gi~~l~~~~~~~ 456 (459)
T COG1167 420 FSADGDPRNGLRLSFSSPSEEEIEEGIKRLAALLREA 456 (459)
T ss_pred ccCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHH
Confidence 87654 458999999999999999999999999764
No 60
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=100.00 E-value=6.7e-48 Score=371.79 Aligned_cols=354 Identities=21% Similarity=0.356 Sum_probs=290.0
Q ss_pred ccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChH
Q 011801 43 LGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGAT 121 (477)
Q Consensus 43 l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t 121 (477)
||.+....+ ++.+.+.+++..+.. ....|....|+++|++++++.+.+.+|.- ....++|++|+|+.
T Consensus 36 LgqGfp~~~~P~fv~ea~~~~~~~~-----------~~~qYt~~~G~p~L~~aL~k~~se~~~~~-~~~~~eVlVT~GA~ 103 (420)
T KOG0257|consen 36 LGQGFPDFPPPKFVTEAAKNAAKEP-----------STNQYTRGYGLPQLRKALAKAYSEFYGGL-LDPDDEVLVTAGAN 103 (420)
T ss_pred ccCCCCCCCCcHHHHHHHHHHhccc-----------hhccccccCCchHHHHHHHHHHHHHhccc-cCCcccEEEecCch
Confidence 777766554 566777776643211 24578888899999999999999866632 22345799999999
Q ss_pred HHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEecc------CCCCcccCHHHHHHHHHHHHHhCCCeeEE
Q 011801 122 GANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCD------ISNNFKITREALEAAYERAQEASINIKGL 195 (477)
Q Consensus 122 ~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~------~~~~f~i~~~~l~~~~~~~~~~~~~~k~v 195 (477)
+++..++..++++||.|++.+|+|+.|....... |...+.++.. .+++|.+|.+.++.++.. ++|+|
T Consensus 104 ~ai~~~~~~l~~~GDeVii~eP~fd~Y~~~~~ma-G~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~------kTk~I 176 (420)
T KOG0257|consen 104 EAISSALLGLLNPGDEVIVFEPFFDCYIPQVVMA-GGTPVFVPLKPKEGNVSSSDWTLDPEELESKITE------KTKAI 176 (420)
T ss_pred HHHHHHHHHHcCCCCEEEEecCcchhhhhHHhhc-CCcceeeccccccccccCccccCChHHHHhhccC------CccEE
Confidence 9999999999999999999999999999999987 9999999988 678899999999999975 99999
Q ss_pred EEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCc
Q 011801 196 IITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGF 275 (477)
Q Consensus 196 ii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~ 275 (477)
++|+||||||.++++++|++|+++|++||+++|.||+|.-++|++..+.+++.+.. .+++++-++|+||+||+.||
T Consensus 177 i~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPg----m~ertitvgS~gKtf~~TGW 252 (420)
T KOG0257|consen 177 ILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPG----MYERTITVGSFGKTFGVTGW 252 (420)
T ss_pred EEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCc----hhheEEEeccccceeeeeee
Confidence 99999999999999999999999999999999999999999999887888777632 67999999999999999999
Q ss_pred eEEEEEeCCHHHHHHHHHhc-c-cCCCchHHHHHHHHhcCChhhH-----HHHHHHHHHHHHHHHHHHHHHHhhCCCeEe
Q 011801 276 RVGIVYSFNDTVVNCGRKMS-S-FGLVSSQTQYLLASMLSDDEFV-----DNFLVETSKRLAKRHHNFTKGLEQVGINCL 348 (477)
Q Consensus 276 RvG~i~~~~~~i~~~~~~~~-~-~~~vs~~~q~~~~~~L~~~~~~-----~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~ 348 (477)
|+||+++ ++.+........ . ...++++.|.+.+..+..+.-. ..++.+..+.++++|+.|.+.|+++|+++.
T Consensus 253 rlGW~ig-p~~L~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~lg~~v~ 331 (420)
T KOG0257|consen 253 RLGWAIG-PKHLYSALFPVHQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEELGLKVT 331 (420)
T ss_pred eeeeeec-hHHhhhhHHHHhhccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 9999999 555555444332 2 2347788888877777654310 134566889999999999999999999999
Q ss_pred cCCceEEEEeeccchhhccCch------HHHHHHHHHHHhcCeEEeCCCCCCCCC-----CCEEEEEeccCCHHHHHHHH
Q 011801 349 KSNAGLFFWMDLRHLLKEKTLE------GEIALWRTIVNDVKLNVSPGSSFQCTE-----PGWFRVCFANMDDDTLQVAL 417 (477)
Q Consensus 349 ~~~~g~~~~~~l~~~~~~~~~~------~e~~l~~~ll~~~gI~v~pg~~f~~~~-----~~~~Rl~~~~~~~e~l~~~l 417 (477)
.+++++|+|++++..-+...++ .+..+.+.++++.|+.+.|++.|+..+ .+.+|+|+.. +++.++.++
T Consensus 332 ~p~gayyl~adfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~k-~~~~L~~a~ 410 (420)
T KOG0257|consen 332 GPEGAYYLWADFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCFCK-ADETLRKAI 410 (420)
T ss_pred cCCCceEEEEeccccccCCcchhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHHHh-hHHHHHHHH
Confidence 9999999999999211111111 233578889999999999999998643 3578999975 889999999
Q ss_pred HHHH
Q 011801 418 NRIA 421 (477)
Q Consensus 418 ~~l~ 421 (477)
++|+
T Consensus 411 e~l~ 414 (420)
T KOG0257|consen 411 ERLK 414 (420)
T ss_pred HHHh
Confidence 9998
No 61
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-46 Score=374.34 Aligned_cols=330 Identities=25% Similarity=0.415 Sum_probs=279.6
Q ss_pred cccccccccccccH-HHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEe
Q 011801 39 GVIQLGLAENQLCF-DLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMG 117 (477)
Q Consensus 39 ~~i~l~~~~n~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t 117 (477)
++++|+.|||++++ +.+.+.++.. ...+..||+. ...++++++|++++. .++++|+++
T Consensus 23 ~~i~LssNenP~gp~~~~~~~~~~~-------------~~~~~rYPd~-~~~~l~~a~a~~~~~-------~~~~~V~~g 81 (356)
T COG0079 23 GIIKLSSNENPYGPPPKVIEAIRAA-------------LDKLNRYPDP-DYRELRAALAEYYGV-------VDPENVLVG 81 (356)
T ss_pred cceeecCCCCCCCCCHHHHHHHHHH-------------HHhhccCCCC-cHHHHHHHHHHHhCC-------CCcceEEEc
Confidence 68999999999976 5566655553 1246789998 579999999999973 578999999
Q ss_pred CChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEE
Q 011801 118 GGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLII 197 (477)
Q Consensus 118 ~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii 197 (477)
+|+++.|..+++.++.+||+|+++.|+|..|...++.. |++++.++..+ |.+|++++.+++.+ ++++|++
T Consensus 82 nGsde~i~~l~~~~~~~gd~vl~~~Ptf~~Y~~~a~~~-g~~~~~v~~~~---~~~d~~~~~~~~~~------~~~lv~i 151 (356)
T COG0079 82 NGSDELIELLVRAFVEPGDTVLIPEPTFSMYEIAAQLA-GAEVVKVPLKE---FRLDLDAILAAIRD------KTKLVFL 151 (356)
T ss_pred CChHHHHHHHHHHhhcCCCEEEEcCCChHHHHHHHHhc-CCeEEEecccc---cccCHHHHHHhhhc------CCCEEEE
Confidence 99999999999999999999999999999999999887 99999999863 89999999998875 7899999
Q ss_pred eCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceE
Q 011801 198 TNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRV 277 (477)
Q Consensus 198 ~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~Rv 277 (477)
||||||||+.++.++++++++.+.+ +.+||+||+|.+ |.++ +...++. .++++++++||||+||++|+|+
T Consensus 152 ~nPNNPTG~~~~~~~l~~l~~~~~~-~~~vVvDEAY~e--F~~~---~~~~l~~----~~~nlivlRTfSKa~gLAGlRl 221 (356)
T COG0079 152 CNPNNPTGTLLPREELRALLEALPE-GGLVVIDEAYIE--FSPE---SSLELLK----YPPNLIVLRTFSKAFGLAGLRV 221 (356)
T ss_pred eCCCCCCCCCCCHHHHHHHHHhCCC-CcEEEEeCchhh--cCCc---hhhhhcc----CCCCEEEEEecHHhhhcchhce
Confidence 9999999999999999999999988 999999999998 4442 3233332 3578999999999999999999
Q ss_pred EEEEeCCHHHHHHHHHhcccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCe-EecCCceEEE
Q 011801 278 GIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGIN-CLKSNAGLFF 356 (477)
Q Consensus 278 G~i~~~~~~i~~~~~~~~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~-~~~~~~g~~~ 356 (477)
||+++ ++.+++.+++....+.+|.++|.++.++|.+.++ +++..+++.+.++++.+.|+++|+. +.++. ++|+
T Consensus 222 Gy~ia-~~~~i~~l~~vr~p~~v~~~a~~aa~aal~~~~~----~~~~~~~~~~~r~rl~~~l~~~~~~~v~pS~-aNFv 295 (356)
T COG0079 222 GYAIA-NPELIAALNKVRPPFNVSSPALAAAIAALRDADY----LEESVERIREERERLYAALKALGLFGVFPSQ-ANFV 295 (356)
T ss_pred eeccC-CHHHHHHHHHhcCCCCCCHHHHHHHHHHcccHHH----HHHHHHHHHHHHHHHHHHHHhCCCCeecCCC-CcEE
Confidence 99888 5567777888877777999999999999999754 7788888999999999999999855 66666 5899
Q ss_pred EeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhh
Q 011801 357 WMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 357 ~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~ 426 (477)
+++++.. . ...+.+.+++ +||.|+..+. ....++|+||+++ ++++.++++++|++++..
T Consensus 296 lv~~~~~------~-~~~l~~~L~~-~giivR~~~~-~~~~~~~lRitvg--t~een~~ll~AL~~~~~~ 354 (356)
T COG0079 296 LVRVPDA------E-AAALAEALLK-KGILVRDCSS-VGLLPGYLRITVG--TPEENDRLLAALREVLKG 354 (356)
T ss_pred EEECCCc------c-HHHHHHHHHH-CCEEEEeCCC-CCCCCCeEEEEeC--CHHHHHHHHHHHHHHHhc
Confidence 9999851 1 1135555554 5999999877 5556789999999 788899999999999865
No 62
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.1e-46 Score=383.26 Aligned_cols=358 Identities=26% Similarity=0.478 Sum_probs=293.6
Q ss_pred cccccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEE
Q 011801 38 GGVIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVM 116 (477)
Q Consensus 38 ~~~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~ 116 (477)
.++|+|+.+.+.++ ++.+.+.+++.-. .....|++..|.++||+++|+++++.+| ..+++++|++
T Consensus 31 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~g~~~lr~~ia~~~~~~~~--~~~~~~~i~~ 96 (393)
T PRK05764 31 RDVISLGAGEPDFDTPEHIKEAAIEALD------------DGKTKYTPAAGIPELREAIAAKLKRDNG--LDYDPSQVIV 96 (393)
T ss_pred CCEEEeCCCCCCCCCCHHHHHHHHHHHh------------cCCCCcCCCCChHHHHHHHHHHHHHHhC--CCCCHHHEEE
Confidence 45799999988776 3555555554211 1234698889999999999999987766 4578899999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEE
Q 011801 117 GGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLI 196 (477)
Q Consensus 117 t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vi 196 (477)
|+|+++|+..++.+++++||.|++++|+|..+...++.. |.++++++++.+++|.+|+++++++++. ++++|+
T Consensus 97 ~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~v~ 169 (393)
T PRK05764 97 TTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLA-GGVPVFVPTGEENGFKLTVEQLEAAITP------KTKALI 169 (393)
T ss_pred eCCcHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHc-CCEEEEEecCcccCCcCCHHHHHHhhCc------cceEEE
Confidence 999999999999999999999999999999998888876 9999999998667899999999988753 788999
Q ss_pred EeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCce
Q 011801 197 ITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFR 276 (477)
Q Consensus 197 i~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~R 276 (477)
+++|+||||.+++.+++++|+++|+++++++|+||+|.++.|++..+.++.++..+ ..+++++++||||.+|+||+|
T Consensus 170 ~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~---~~~~~i~~~s~SK~~~~~G~R 246 (393)
T PRK05764 170 LNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPE---LRDRTITVNGFSKAYAMTGWR 246 (393)
T ss_pred EECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCC---CcCCEEEEecCcccccCccce
Confidence 99999999999999999999999999999999999999887766555565554221 346899999999999999999
Q ss_pred EEEEEeCCHHHHHHHHHhc--ccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEecCCce
Q 011801 277 VGIVYSFNDTVVNCGRKMS--SFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLKSNAG 353 (477)
Q Consensus 277 vG~i~~~~~~i~~~~~~~~--~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~~~~g 353 (477)
+||++++++ +.+.+.... ..+.++++.|.++..+|.+. +.++.+.++.++++++.+.+.|+++ |+.+..+++|
T Consensus 247 iG~i~~~~~-~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g~ 322 (393)
T PRK05764 247 LGYAAGPKE-LIKAMSKLQSHSTSNPTSIAQYAAVAALNGP---QDEVEEMRQAFEERRDLMVDGLNEIPGLECPKPEGA 322 (393)
T ss_pred eEEEecCHH-HHHHHHHHHhhcccCCChHHHHHHHHHHcCC---hHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCCcc
Confidence 999998655 444443332 23457889999999999731 3567778888999999999999998 8888889999
Q ss_pred EEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhhh
Q 011801 354 LFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQQD 427 (477)
Q Consensus 354 ~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~~ 427 (477)
+|+|++++........ ...+++..+++++||.+.||+.|+. ++++|||++. +++++++++++|++++++.
T Consensus 323 ~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~gi~v~~g~~f~~--~~~vRis~~~-~~~~~~~~i~~l~~~~~~~ 392 (393)
T PRK05764 323 FYVFPNVSKLLGKSIT-DSLEFAEALLEEAGVAVVPGIAFGA--PGYVRLSYAT-SLEDLEEGLERIERFLESL 392 (393)
T ss_pred eEEEEecccccccccC-CHHHHHHHHHHhCCEEEccccccCC--CCEEEEEecC-CHHHHHHHHHHHHHHHHhh
Confidence 9999999864322111 1246778888888999999999865 7899999986 8999999999999998753
No 63
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=1.2e-46 Score=385.22 Aligned_cols=344 Identities=17% Similarity=0.223 Sum_probs=270.0
Q ss_pred cccccccccc--c---cc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCC
Q 011801 39 GVIQLGLAEN--Q---LC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPD 112 (477)
Q Consensus 39 ~~i~l~~~~n--~---~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ 112 (477)
++|+|+.+.. + .+ .+.+.+.+.+.... .....|++..|.++||++||+|+.+..+ ..++++
T Consensus 27 ~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~-----------~~~~~Y~~~~G~~~lR~aia~~~~~~~~--~~~~~~ 93 (396)
T PRK09257 27 DKVNLGVGVYKDEQGRTPVLRAVKKAEARLLET-----------ETTKNYLPIEGLAAYRQAVQELLFGADS--PALAAG 93 (396)
T ss_pred CcEecceeeEECCCCCEeccHHHHHHHHHhccc-----------ccCCCcCCCCCCHHHHHHHHHHhcCCCC--cccccC
Confidence 6799999852 1 22 24566665553211 1244799999999999999999976543 335788
Q ss_pred cE--EEeCChHHHHHHHHHHh--cCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHh
Q 011801 113 RI--VMGGGATGANELIMFCL--ANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEA 188 (477)
Q Consensus 113 ~i--~~t~G~t~al~~i~~~l--~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~ 188 (477)
+| ++|+|+++|+.++++.+ ++|||.|++++|+|+.|...++.. |++++++++...++|.+|++++++++++.
T Consensus 94 ~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~-g~~~v~v~~~~~~~~~~d~~~l~~~~~~~--- 169 (396)
T PRK09257 94 RVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAA-GLEVKTYPYYDAATKGLDFDAMLADLSQA--- 169 (396)
T ss_pred eEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHc-CCcEEEEeccccccCccCHHHHHHHHHhC---
Confidence 87 99999999999998766 589999999999999999999887 99999999843346899999999988642
Q ss_pred CCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccC-CCCcccHHHhhhhccCCCCcEEEEecCC
Q 011801 189 SINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFS-SPKFTSVAEVIQEMDCNRDLIHIIYSLS 267 (477)
Q Consensus 189 ~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~-~~~~~s~~~~~~~~~~~~~~viiv~SlS 267 (477)
..+.++++++|||||||.+++.+++++|+++|++++++||+||+|.++.++ +..+.++..+.. ..+++++++|||
T Consensus 170 ~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~----~~~~vi~i~SfS 245 (396)
T PRK09257 170 PAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAA----AGLELLVASSFS 245 (396)
T ss_pred CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHh----cCCcEEEEEEcC
Confidence 123456677999999999999999999999999999999999999987664 222345444432 346899999999
Q ss_pred cccCCCCceEEEEEe--CC-HHHH---HHHHHh--cccCCCchHHHHHHHHhcCChhh---HHHHHHHHHHHHHHHHHHH
Q 011801 268 KDMGLPGFRVGIVYS--FN-DTVV---NCGRKM--SSFGLVSSQTQYLLASMLSDDEF---VDNFLVETSKRLAKRHHNF 336 (477)
Q Consensus 268 K~~g~~G~RvG~i~~--~~-~~i~---~~~~~~--~~~~~vs~~~q~~~~~~L~~~~~---~~~~~~~~~~~l~~r~~~l 336 (477)
|.++++|+|+||+++ ++ +.+. ..+.+. ..++.++.++|.+++.+|.++++ .++++++.+++++++++.+
T Consensus 246 K~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l 325 (396)
T PRK09257 246 KNFGLYGERVGALSVVAEDAEEADRVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLL 325 (396)
T ss_pred CcCccccccceeEEEEeCCHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999984 33 3222 222221 34455688999999999998753 2577888999999999999
Q ss_pred HHHHhhCC----CeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHH
Q 011801 337 TKGLEQVG----INCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDT 412 (477)
Q Consensus 337 ~~~L~~~g----i~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~ 412 (477)
.+.|++.+ +.+..+++|+|+|++++. +++..++++.||.+.|. + |++|++.++++
T Consensus 326 ~~~L~~~~~~~~~~~~~p~gg~~~w~~l~~-----------~~~~~l~~~~~V~~~p~--------~--ri~~~~~~~~~ 384 (396)
T PRK09257 326 VEALKAKGPSRDFDFIARQRGMFSYSGLTP-----------EQVDRLREEFGVYAVGS--------G--RINVAGLNESN 384 (396)
T ss_pred HHHHHhcCCCCCcccccccceEEEecCCCH-----------HHHHHHHHcCCEEEcCC--------C--eEEEeeCCHHH
Confidence 99999875 667789999999999862 35567888899999762 2 99998789999
Q ss_pred HHHHHHHHHHHH
Q 011801 413 LQVALNRIAAFV 424 (477)
Q Consensus 413 l~~~l~~l~~~~ 424 (477)
+++++++|++++
T Consensus 385 i~~~~~~i~~~~ 396 (396)
T PRK09257 385 IDYVAEAIAAVL 396 (396)
T ss_pred HHHHHHHHHhhC
Confidence 999999998753
No 64
>PLN02672 methionine S-methyltransferase
Probab=100.00 E-value=1.9e-46 Score=409.46 Aligned_cols=367 Identities=16% Similarity=0.265 Sum_probs=285.5
Q ss_pred CCCCCCCccccccccccccccH-HHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCcc
Q 011801 31 FHPTQNPGGVIQLGLAENQLCF-DLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTF 109 (477)
Q Consensus 31 ~~~~~~~~~~i~l~~~~n~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~ 109 (477)
|.+...+.++|+|+.|+|++++ +.+.+.+.+.. .. ..+ +.|.+++++++++|+.+.+| +..
T Consensus 690 ~~~~~~g~~vI~LsinE~d~ppPp~V~eAi~eal-------------~~-~~~--s~g~pdlr~aLa~~la~~~G--v~~ 751 (1082)
T PLN02672 690 SVSGSQESSLIHMDVDESFLPVPSAVKASIFESF-------------VR-QNI--SESETDPRPSILQFIKSNYG--FPT 751 (1082)
T ss_pred CCcccCCCCEEEEeCCCCCCCCCHHHHHHHHHHH-------------hh-cCC--CCCChHHHHHHHHHHHHHhC--cCC
Confidence 4455556689999999999964 55666665421 01 122 34678899999999998877 445
Q ss_pred CC-CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHh
Q 011801 110 DP-DRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEA 188 (477)
Q Consensus 110 ~~-~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~ 188 (477)
++ ++|++|+|+++++..+++++++|||.|++++|+|+.|...++.. |+++++++++.+++|.+|.++|++++++.
T Consensus 752 d~~e~IIvt~Gs~elL~lll~aLl~pGD~VLVp~PtY~~Y~~~a~~~-Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~--- 827 (1082)
T PLN02672 752 DSCTEFVYGDTSLALFNKLVLCCVQEGGTLCFPAGSNGTYVSAAKFL-KANFRRIPTKSSDGFKLTAKTLASTLETV--- 827 (1082)
T ss_pred CCCCEEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHc-CCEEEEEecccccCCCCCHHHHHHHhccC---
Confidence 54 58999999999999999999999999999999999999999987 99999999986778999999999988531
Q ss_pred CCCeeEEEEeCCC-CCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCc--ccHHHhhhhccCC--CCcEEEE
Q 011801 189 SINIKGLIITNPS-NPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKF--TSVAEVIQEMDCN--RDLIHII 263 (477)
Q Consensus 189 ~~~~k~vii~nP~-NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~--~s~~~~~~~~~~~--~~~viiv 263 (477)
+.+.|+++||+ ||||.+++.+++++|+++|++||++||+||+|+++.|++... .++.......+.. ..+++++
T Consensus 828 --~~~~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL 905 (1082)
T PLN02672 828 --KKPWVYISGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALL 905 (1082)
T ss_pred --CCCEEEEECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEE
Confidence 34578999997 999999999999999999999999999999999988875431 2222221110001 2379999
Q ss_pred ecCCcccCCCCceEEEEEeCCHHHHHHHHHhcccCCCchHHHHHHH---HhcC--ChhhHHHHHHHHHHHHHHHHHHHHH
Q 011801 264 YSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLA---SMLS--DDEFVDNFLVETSKRLAKRHHNFTK 338 (477)
Q Consensus 264 ~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~~~~~vs~~~q~~~~---~~L~--~~~~~~~~~~~~~~~l~~r~~~l~~ 338 (477)
+||||.+++||+|+||++++++.+.+.+.+...........|.++. .++. ++++ ..++.+.++.++++++++.+
T Consensus 906 ~SfSKkf~lpGLRIGylIap~~eLi~~l~~~~~~s~~~~~~q~Aaaaalall~~~~~~~-~~~l~e~r~~Lk~rRd~L~e 984 (1082)
T PLN02672 906 GGLSTELLSGGHEFGFLALNDSVLIDAFHSAPGLSRPHSTLKYTIKKLLGLKNQKSSDL-LDGVAEQKKILKSRAERLKE 984 (1082)
T ss_pred eCcHHhhccHHHHheeEEeCCHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHhccCcHH-HHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999877666655544333223333444433 3332 4455 56788889999999999999
Q ss_pred HHhhCCCeEecCCceEEEEeeccchhh----ccC-------chHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEecc
Q 011801 339 GLEQVGINCLKSNAGLFFWMDLRHLLK----EKT-------LEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFAN 407 (477)
Q Consensus 339 ~L~~~gi~~~~~~~g~~~~~~l~~~~~----~~~-------~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~ 407 (477)
.|++.|+.+.++++|+|+|++++.... ... -.++.++++.++++.||.|.||+.|+. ++|+||+|+.
T Consensus 985 ~L~~~Gi~v~~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~--~g~~RIsfa~ 1062 (1082)
T PLN02672 985 TLEACGWDVLEPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGI--PGYCRFSFAL 1062 (1082)
T ss_pred HHHHCCCeEecCCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCC--CCeEEEEecC
Confidence 999999999999999999998764321 000 012457899999989999999988764 7899999995
Q ss_pred CCHHHHHHHHHHHHHHHh
Q 011801 408 MDDDTLQVALNRIAAFVQ 425 (477)
Q Consensus 408 ~~~e~l~~~l~~l~~~~~ 425 (477)
+++++++++++|+++++
T Consensus 1063 -~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1063 -EDSEFDRALKAIARFKE 1079 (1082)
T ss_pred -CHHHHHHHHHHHHHHHH
Confidence 88999999999999864
No 65
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3e-46 Score=382.95 Aligned_cols=318 Identities=17% Similarity=0.207 Sum_probs=256.7
Q ss_pred cccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEE--EeCChHHHHHHHHH---HhcCCCCeEEEcCCCccchHHHH
Q 011801 78 DIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIV--MGGGATGANELIMF---CLANPGDAFLVPSPYYAAFDRDL 152 (477)
Q Consensus 78 ~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~--~t~G~t~al~~i~~---~l~~~Gd~vlv~~P~y~~~~~~~ 152 (477)
....|++..|.++||+++|+|+.+..+ ..+++++|+ .|.|+++|+..++. ++++|||.|++++|+|+.|...+
T Consensus 64 ~~~~Y~~~~G~~~lR~aia~~~~~~~~--~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~ 141 (404)
T PTZ00376 64 LDKEYLPIEGLQSFIEAAQKLLFGEAS--YALAEKRIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIF 141 (404)
T ss_pred CCCCCCCCCCCHHHHHHHHHHhcCCCc--cccccCeEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHH
Confidence 346799999999999999999965433 346889998 59999999998875 56899999999999999999988
Q ss_pred hhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEeccc
Q 011801 153 SWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEI 232 (477)
Q Consensus 153 ~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~ 232 (477)
+.. |++++++++.++++|.+|++.+++++++. ..+.++++++|||||||.+++.+++++|+++|++|+++||+||+
T Consensus 142 ~~~-G~~~~~v~l~~~~~~~~d~~~l~~~~~~~---~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~ 217 (404)
T PTZ00376 142 KSA-GLNVKEYRYYDPKTKGLDFDGMLEDLRTA---PNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMA 217 (404)
T ss_pred HHc-CCceeeccccCcccCCcCHHHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehh
Confidence 877 99999999855557899999999988642 12456778899999999999999999999999999999999999
Q ss_pred ccccccCCC--CcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEE---eCCHH---HHHHHHHh--cccCCCch
Q 011801 233 YAATVFSSP--KFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVY---SFNDT---VVNCGRKM--SSFGLVSS 302 (477)
Q Consensus 233 y~~~~~~~~--~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~---~~~~~---i~~~~~~~--~~~~~vs~ 302 (477)
|.++.|++. .+.++..+.. ..+++++++||||.||+||+|+||++ ++++. +...+.+. ..++.+++
T Consensus 218 Y~~~~~~~~~~~~~~~~~~~~----~~~~vi~i~SfSK~~~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 293 (404)
T PTZ00376 218 YQGFASGDLDKDAYAIRLFAE----RGVEFLVAQSFSKNMGLYGERIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPI 293 (404)
T ss_pred hcCccCCCHHHHHHHHHHHHh----cCCcEEEEEeCCCcccccccccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCch
Confidence 999877541 2234443332 34689999999999999999999984 44432 22223322 23344577
Q ss_pred HHHHHHHHhcCChhhHHH---HHHHHHHHHHHHHHHHHHHHhhCC----CeEecCCceEEEEeeccchhhccCchHHHHH
Q 011801 303 QTQYLLASMLSDDEFVDN---FLVETSKRLAKRHHNFTKGLEQVG----INCLKSNAGLFFWMDLRHLLKEKTLEGEIAL 375 (477)
Q Consensus 303 ~~q~~~~~~L~~~~~~~~---~~~~~~~~l~~r~~~l~~~L~~~g----i~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l 375 (477)
++|.++..+|.++++.+. ++++.+++++++++.+.+.|++.+ +.+..+++|+|+|++++. ++
T Consensus 294 ~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~p~gg~f~~~~~~~-----------~~ 362 (404)
T PTZ00376 294 HGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKALGSPGDWEHIINQIGMFSFTGLTK-----------EQ 362 (404)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccCceEEEecCCCH-----------HH
Confidence 999999999998765333 356667899999999999999875 446678999999998852 57
Q ss_pred HHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhh
Q 011801 376 WRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 376 ~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~ 426 (477)
++.|++++||.+.|| + ||+++.++.++++.++++|++++..
T Consensus 363 ~~~L~~~~~v~v~p~--------~--Ris~~~~~~~~~~~~~~~l~~~~~~ 403 (404)
T PTZ00376 363 VERLIEKYHIYLLDN--------G--RISVAGLTSKNVDYVAEAIHDVVRN 403 (404)
T ss_pred HHHHHHhCCEeecCC--------C--eEEEeccCHHhHHHHHHHHHHHHhc
Confidence 788999999999987 1 9999878999999999999999753
No 66
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=100.00 E-value=2.1e-46 Score=387.42 Aligned_cols=354 Identities=17% Similarity=0.270 Sum_probs=268.6
Q ss_pred ccccccccccccccH-HHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHH-HHhcccCCCCccCCC--c
Q 011801 38 GGVIQLGLAENQLCF-DLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAK-FMGKGRGGRVTFDPD--R 113 (477)
Q Consensus 38 ~~~i~l~~~~n~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~-~~~~~~g~~~~~~~~--~ 113 (477)
.++|+++.++..+++ +.+.++.... . -.+|+++.|..++++++++ |+.+.++... .+++ +
T Consensus 94 ~~~i~l~~g~p~~~~~~~~~~~~~~~-------------~--~~~Y~~p~g~~~~~e~iv~~y~~~~~~~~~-~~~~~~~ 157 (521)
T TIGR03801 94 RDIISYVIDQLGFDPDAFLYEMCDGI-------------I--GDNYPVPDRMLPHSEKIVHQYLIQEMCGNK-PPPGEFD 157 (521)
T ss_pred HHHHhhcCCCCCCCCCHHHHHHHHHh-------------h--cCCCCCCCCCHHHHHHHHHHHHHhhccCCC-CCCCcCe
Confidence 356888888776654 3454444331 0 1269877788888888874 6665443221 2334 8
Q ss_pred EEEeCChHHHHHHHHHH-----hcCCCCeEEEcCCCccchHHHHhhh-CCcEEEEEeccCCCC-----cccCHHHHHHHH
Q 011801 114 IVMGGGATGANELIMFC-----LANPGDAFLVPSPYYAAFDRDLSWR-TGVQIVPVHCDISNN-----FKITREALEAAY 182 (477)
Q Consensus 114 i~~t~G~t~al~~i~~~-----l~~~Gd~vlv~~P~y~~~~~~~~~~-~g~~~~~v~~~~~~~-----f~i~~~~l~~~~ 182 (477)
|++|+|+++|+..++.+ +++|||.|++++|+|+.|...+... .|+++++++++..++ |.+|.+++++++
T Consensus 158 V~it~Gat~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~ 237 (521)
T TIGR03801 158 LFAVEGGTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLR 237 (521)
T ss_pred EEEeCCHHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhc
Confidence 99999999999999887 7899999999999999999886653 378888888865433 999999998765
Q ss_pred HHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc--CeEEEecccccccccCCCCcccHHHhhhhccCCCCcE
Q 011801 183 ERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDK--NIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLI 260 (477)
Q Consensus 183 ~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~--~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~v 260 (477)
.+ ++|+|+++|||||||.+++.+++++|+++|+++ +++||+||+|..+.+ .+.|+... .++++
T Consensus 238 ~~------~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~---~~~sl~~~------~~~~v 302 (521)
T TIGR03801 238 DP------SIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVD---DFRSLFAE------LPYNT 302 (521)
T ss_pred CC------CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcc---cccchhhh------CCCCE
Confidence 43 899999999999999999999999999999986 999999999997643 34565444 34789
Q ss_pred EEEecCCcccCCCCceEEEEEeCCHHHHH------------HH------------------------HHhcc--cCCCch
Q 011801 261 HIIYSLSKDMGLPGFRVGIVYSFNDTVVN------------CG------------------------RKMSS--FGLVSS 302 (477)
Q Consensus 261 iiv~SlSK~~g~~G~RvG~i~~~~~~i~~------------~~------------------------~~~~~--~~~vs~ 302 (477)
++++||||.||++|+|+||++++++.+.+ .+ ++... ...+|+
T Consensus 303 I~v~SfSK~fg~~G~RlG~i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~ 382 (521)
T TIGR03801 303 IGVYSFSKYFGATGWRLGTIALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLST 382 (521)
T ss_pred EEEEcchhhccCchhhhhhhhcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCc
Confidence 99999999999999999999998653311 11 11211 122455
Q ss_pred HHHH--H---HHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCe--EecCCceEEEEeeccchhhc---cCc---
Q 011801 303 QTQY--L---LASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGIN--CLKSNAGLFFWMDLRHLLKE---KTL--- 369 (477)
Q Consensus 303 ~~q~--~---~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~--~~~~~~g~~~~~~l~~~~~~---~~~--- 369 (477)
+.|. + +.+++... +.++++.++++++|++.+.+.| |+. +.++++|+|+|++++..... ..|
T Consensus 383 p~Q~q~al~a~~all~~~---~~y~~~~~~~~~~R~~~l~~~L---g~~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~ 456 (521)
T TIGR03801 383 PQQVQMALFSLFALMDKE---NAYKAETKDICRRREKLLFRGL---GLPLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSY 456 (521)
T ss_pred HHHHHHHHHHHHHHhccc---hhHHHHHHHHHHHHHHHHHHhc---CCCCcCCCCCeEEEEEeehHHHHHHhcchHHHHH
Confidence 5555 3 44555432 4578888999999999999998 444 45688999999999863210 001
Q ss_pred ----hHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhhhhc
Q 011801 370 ----EGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQQDKE 429 (477)
Q Consensus 370 ----~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~~~~ 429 (477)
.++.+++.+|+++.||.+.||+.|+.. ++++|||+++.+++++.++.++|+++++++.+
T Consensus 457 l~~~~~~~~~~~~L~~e~gV~v~PG~~Fg~~-~~~vRisla~l~~~~~~~~~~rl~~~~~~~~~ 519 (521)
T TIGR03801 457 LKKNYSPVDVLFRLAEETGIVLLPGGGFGGP-EWSVRVSLANLNEYDYAEIGRAIRKILDEYYE 519 (521)
T ss_pred HhccCCHHHHHHHHHHhCCEEEeCchhcCCC-CCeEEEEecCCCHHHHHHHHHHHHHHHHHHHH
Confidence 134689999999999999999999863 56899999988999999999999999987653
No 67
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1.1e-46 Score=380.62 Aligned_cols=326 Identities=18% Similarity=0.288 Sum_probs=264.3
Q ss_pred cccccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEE
Q 011801 38 GGVIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVM 116 (477)
Q Consensus 38 ~~~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~ 116 (477)
.++|+|+.|+|+++ ++.+.+.+.+.. .....|+ ..|.++||+++|++++ +++++|++
T Consensus 29 ~~~i~l~~nen~~~~~~~v~~a~~~~~-------------~~~~~Yp-~~g~~~Lr~aia~~~~--------~~~~~I~v 86 (366)
T PRK01533 29 HSFVKLASNENPFGCSPRVLDELQKSW-------------LDHALYP-DGGATTLRQTIANKLH--------VKMEQVLC 86 (366)
T ss_pred CceEEeCCCCCCCCCCHHHHHHHHHHH-------------HhcCcCC-CCCHHHHHHHHHHHhC--------CCcceEEE
Confidence 47899999999995 466666665531 1233575 4589999999999985 67999999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEE
Q 011801 117 GGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLI 196 (477)
Q Consensus 117 t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vi 196 (477)
|+|+++++.+++.+++++||.|++++|+|+.|...++.. |+++++++++ ++.+|++++++++++ ++++|+
T Consensus 87 t~Gs~e~i~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~-g~~v~~v~~~---~~~~d~~~l~~~~~~------~~~~v~ 156 (366)
T PRK01533 87 GSGLDEVIQIISRAVLKAGDNIVTAGATFPQYRHHAIIE-GCEVKEVALN---NGVYDLDEISSVVDN------DTKIVW 156 (366)
T ss_pred CCCHHHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHc-CCEEEEeecC---CCCcCHHHHHHHhCc------CCcEEE
Confidence 999999999999999999999999999999999988877 9999999985 346899999988754 788999
Q ss_pred EeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCce
Q 011801 197 ITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFR 276 (477)
Q Consensus 197 i~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~R 276 (477)
+||||||||.+++.+++++|+++|++++ ++|+||+|.++.+... ..+....++ ..+++++++||||.||+||+|
T Consensus 157 i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~-~~~~~~~~~----~~~~vi~~~SfSK~~~l~GlR 230 (366)
T PRK01533 157 ICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKD-FPETLPLLE----KHKNILVLRTFSKAYGLASFR 230 (366)
T ss_pred EeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhcccc-CcchhHHhc----cCCCEEEEeCchHHhcChHHH
Confidence 9999999999999999999999998876 5677999997655432 223333333 357899999999999999999
Q ss_pred EEEEEeCCHHHHHHHHHhcccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEE
Q 011801 277 VGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFF 356 (477)
Q Consensus 277 vG~i~~~~~~i~~~~~~~~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~ 356 (477)
+||+++++ .+.+.+.+....+.++.++|.++..+|++.++ +++.++.++++++++.+.++..|+++.+++ |+|+
T Consensus 231 iG~~i~~~-~~~~~l~~~~~~~~~~~~~q~aa~~~l~~~~~----~~~~~~~~~~~r~~~~~~l~~~g~~~~~~~-~nf~ 304 (366)
T PRK01533 231 VGYAVGHE-ELIEKLNVVRLPFNVSSLAQKAATIAFGDDEF----IEEIVRVNTEGLRQYESFCKENEIPFYQSQ-TNFI 304 (366)
T ss_pred HhHHhCCH-HHHHHHHHhcCCCCcCHHHHHHHHHHhCCHHH----HHHHHHHHHHHHHHHHHHHHhCCCccCCCc-CcEE
Confidence 99999964 45555555555567999999999999988665 455566677788888888888899888775 5799
Q ss_pred EeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhh
Q 011801 357 WMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 357 ~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~ 426 (477)
|++++. . .++.+.++ ++||.|++ | ++++||+++ +.++++.++++|+++++.
T Consensus 305 ~~~~~~---~------~~~~~~l~-~~GI~Vr~---~----~~~iRis~~--~~~~~~~l~~al~~~~~~ 355 (366)
T PRK01533 305 FLPVEN---G------GEIYEACA-HAGFIIRP---F----PNGVRITVG--TREQNEGVISVLQQHFEN 355 (366)
T ss_pred EEeCCC---H------HHHHHHHH-HCCcEEcc---C----CCceEEeCC--CHHHHHHHHHHHHHHHHh
Confidence 999862 1 13555555 57999997 3 478999998 789999999999999865
No 68
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=3.4e-46 Score=376.50 Aligned_cols=334 Identities=18% Similarity=0.295 Sum_probs=269.0
Q ss_pred CccccccccccccccH-HHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEE
Q 011801 37 PGGVIQLGLAENQLCF-DLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIV 115 (477)
Q Consensus 37 ~~~~i~l~~~~n~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~ 115 (477)
+.++|+|++++|++++ +.+.+.+.+.. .....|++. +.+++|++||++++ +++++|+
T Consensus 19 ~~~~i~l~~~~~~~~~p~~~~~a~~~~~-------------~~~~~y~~~-~~~~lr~~ia~~~~--------~~~~~i~ 76 (356)
T PRK08056 19 PDQLLDFSANINPLGMPVSLKRAIIDNL-------------DCAERYPDV-EYRHLHQALARHHQ--------VPASWIL 76 (356)
T ss_pred hhhEEEeccccCCCCCCHHHHHHHHHHH-------------HhcccCcCc-cHHHHHHHHHHHhC--------cChhhEE
Confidence 4568999999999854 55666655421 123468765 68999999999985 6799999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEE
Q 011801 116 MGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGL 195 (477)
Q Consensus 116 ~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~v 195 (477)
+|+|+++++..++.++ .+|+ +++++|+|..|...++.. |+++++++++.+++|.+| +++.+++. .++|+|
T Consensus 77 it~Ga~~~l~~~~~~l-~~g~-viv~~P~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~~-~~~~~~~~------~~~k~v 146 (356)
T PRK08056 77 AGNGETESIFAVVSGL-KPRR-AMIVTPGFAEYRRALQQV-GCEIRRYSLREADGWQLT-DAILEALT------PDLDCL 146 (356)
T ss_pred ECCCHHHHHHHHHHHh-CCCC-EEEeCCCcHHHHHHHHHc-CCeEEEEecccccCCCcc-HHHHHhcc------CCCCEE
Confidence 9999999999999887 6776 788899999998888877 999999999766778877 34444443 278999
Q ss_pred EEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCc
Q 011801 196 IITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGF 275 (477)
Q Consensus 196 ii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~ 275 (477)
+++|||||||.+++.+++++|+++|++++++||+||+|.++.+.+..+.+. +. ..+++++++||||.||+||+
T Consensus 147 ~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~---~~----~~~~~i~~~S~SK~~~~~G~ 219 (356)
T PRK08056 147 FLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQ---LA----DNPHLWVLRSLTKFYAIPGL 219 (356)
T ss_pred EEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHH---hc----cCCCEEEEEechhhccCcch
Confidence 999999999999999999999999999999999999999876654333332 22 34688999999999999999
Q ss_pred eEEEEEeCCHHHHHHHHHhcccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEecCCceE
Q 011801 276 RVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLKSNAGL 354 (477)
Q Consensus 276 RvG~i~~~~~~i~~~~~~~~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~~~~g~ 354 (477)
|+||++++++.+...+++....+.++.++|.++..++++.++ +++.+++++++++.+.+.|+++ |+.+.++ +|+
T Consensus 220 RiG~~v~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~l~~~~~----~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~-~~~ 294 (356)
T PRK08056 220 RLGYLVNSDDAAVARMRRQQMPWSINAFAALAGEVILQDRAY----QQATWQWLAEEGARFYQALCALPLLTVWPG-RAN 294 (356)
T ss_pred hheeeecCCHHHHHHHHHhCCCCchhHHHHHHHHHHhCCHHH----HHHHHHHHHHHHHHHHHHHhcCCCcEEcCC-CCc
Confidence 999999866556565666555666888999999999987554 5677788999999999999887 7777665 568
Q ss_pred EEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHh
Q 011801 355 FFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQ 425 (477)
Q Consensus 355 ~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~ 425 (477)
|+|++++.. ..++++.+++ +||.|+||+.|....++|+||+++ ++++++.+++.|+++++
T Consensus 295 ~~~~~~~~~--------~~~~~~~l~~-~gI~v~~~~~f~~~~~~~iRis~~--~~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 295 YLFLRCERP--------DIDLQRALLT-QRILIRSCANYPGLDSRYYRVAIR--SAAENERLLAALRNVLT 354 (356)
T ss_pred EEEEEcCCC--------hHHHHHHHHH-CCeEEEECCCCCCCCCCEEEEEEc--CHHHHHHHHHHHHHHHc
Confidence 999998731 1257777764 699999999996555689999998 68899999999998865
No 69
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-45 Score=347.96 Aligned_cols=331 Identities=21% Similarity=0.382 Sum_probs=289.3
Q ss_pred cccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCC
Q 011801 78 DIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTG 157 (477)
Q Consensus 78 ~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g 157 (477)
....|.+..|++..|+|||+|+.+... -.+++++|++|+|.++|+++++.+|++||..||+|.|+|+-|...+... |
T Consensus 95 k~N~Yaps~G~~~AR~AVAeYl~~~l~--~kl~a~DV~ltsGC~qAIe~~i~~LA~p~aNILlPrPGfp~Y~~~a~~~-~ 171 (447)
T KOG0259|consen 95 KGNGYAPSVGILPARRAVAEYLNRDLP--NKLTADDVVLTSGCSQAIELAISSLANPGANILLPRPGFPLYDTRAIYS-G 171 (447)
T ss_pred CCCCcCCccccHHHHHHHHHHhhcCCC--CccCcCceEEeccchHHHHHHHHHhcCCCCceecCCCCCchHHHhhhhc-C
Confidence 456899999999999999999886554 3478999999999999999999999999999999999999998877766 9
Q ss_pred cEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccc
Q 011801 158 VQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATV 237 (477)
Q Consensus 158 ~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~ 237 (477)
+++..+.+-++.+|.+|++.+|+.+.+ ++.++++.||+||+|.+++.+.|++|+++|+++++.||.||+|..++
T Consensus 172 lEVR~ydlLPe~~weIDL~~veal~DE------NT~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~v 245 (447)
T KOG0259|consen 172 LEVRYYDLLPEKDWEIDLDGVEALADE------NTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTV 245 (447)
T ss_pred ceeEeecccCcccceechHHHHHhhcc------CeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceee
Confidence 999999998899999999999999876 89999999999999999999999999999999999999999999999
Q ss_pred cCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCH-------HHHHHHHHhccc-CCCchHHHHHHH
Q 011801 238 FSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFND-------TVVNCGRKMSSF-GLVSSQTQYLLA 309 (477)
Q Consensus 238 ~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~-------~i~~~~~~~~~~-~~vs~~~q~~~~ 309 (477)
|++.+|.++..+.. --.|+.++|+||.|=.||||+||++..+. .+++.+.++... ...+++.|.++-
T Consensus 246 fg~~pfvpmg~fss-----iVPVitlggisKrW~VPGWRlGWi~~hD~~gvf~~~~~~q~~~~~~~~~~~p~TiiQ~AlP 320 (447)
T KOG0259|consen 246 FGDKPFVPMGKFSS-----IVPVITLGGISKRWIVPGWRLGWIALHDPRGVFRDTKVVQGIKNFLDIIPGPATIIQGALP 320 (447)
T ss_pred cCCCCccchhhccc-----cCceEeecccccccccCCceeeeEEEecccccccchHHHHHHHHHHhccCCccHhHHHHhH
Confidence 99999999988753 34578899999999999999999998653 223344444332 336779999999
Q ss_pred HhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCe-EecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEE
Q 011801 310 SMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GIN-CLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNV 387 (477)
Q Consensus 310 ~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~-~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v 387 (477)
.+|+... ++|+.....-++...+...+.|++. ++. ..+|++.+|+|+++.-..- ..++++.+|+.+|.+|..+.+
T Consensus 321 ~IL~kTp--~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPeg~mylmv~l~~s~~-~~~~dD~dFc~kL~~Eesv~~ 397 (447)
T KOG0259|consen 321 DILEKTP--EEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPEGCMYLMVKLNLSLF-PDIEDDVDFCQKLAREESVIC 397 (447)
T ss_pred HHHHhCh--HHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCCcceEEEeccchhhh-ccccccHHHHHHHhhhcceEE
Confidence 9998755 6778888999999999999999998 777 4579999999999874322 345677899999999999999
Q ss_pred eCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhhhh
Q 011801 388 SPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQQDK 428 (477)
Q Consensus 388 ~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~~~ 428 (477)
.||..|+. ++|+|++++ ++.+.++++.+||+.|..++.
T Consensus 398 LPG~af~~--~nw~Ri~i~-~~~~~leea~~Rik~Fc~RH~ 435 (447)
T KOG0259|consen 398 LPGQAFGL--KNWLRIVIT-VEEEMLEEAFSRIKEFCDRHS 435 (447)
T ss_pred eccccccC--CCeEEEEEc-cChHHHHHHHHHHHHHHHhhh
Confidence 99999975 899999998 588999999999999998765
No 70
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=1.5e-45 Score=372.44 Aligned_cols=333 Identities=20% Similarity=0.288 Sum_probs=257.9
Q ss_pred Ccccccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEE
Q 011801 37 PGGVIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIV 115 (477)
Q Consensus 37 ~~~~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~ 115 (477)
+.++|+|+.++|+++ ++.+.+.+.+. +..+..|++.. .++||++||+|++ +++++|+
T Consensus 21 ~~~~i~l~~~~n~~~~~~~~~~a~~~~-------------~~~~~~Y~~~~-~~~Lr~aia~~~~--------v~~~~I~ 78 (360)
T PRK07392 21 PDAILDFSASINPLGPPESVIAAIQSA-------------LSALRHYPDPD-YRELRLALAQHHQ--------LPPEWIL 78 (360)
T ss_pred cccEEEeCCcCCCCCCCHHHHHHHHHH-------------HHHhhcCCCcC-HHHHHHHHHHHhC--------cChhhEE
Confidence 457899999999985 45566666542 12345798764 6899999999994 6799999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcc---cCHHHHHHHHHHHHHhCCCe
Q 011801 116 MGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFK---ITREALEAAYERAQEASINI 192 (477)
Q Consensus 116 ~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~---i~~~~l~~~~~~~~~~~~~~ 192 (477)
+|+|+++++.+++.++. +||.|++++|+|+.|...++.. |+++++++++.++++. .+++++++.. .++
T Consensus 79 it~G~~~~i~~~~~~l~-~g~~vlv~~P~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-------~~~ 149 (360)
T PRK07392 79 PGNGAAELLTWAGRELA-QLRAVYLITPAFGDYRRALRAF-GATVKELPLPLDQPSPGLTLRLQTLPPQL-------TPN 149 (360)
T ss_pred ECCCHHHHHHHHHHHhC-CCCeEEEECCCcHHHHHHHHHc-CCeEEEEecccccCCcccccCHHHHHHhc-------cCC
Confidence 99999999999998875 7899999999999999999887 9999999997665553 3444443321 267
Q ss_pred eEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCC
Q 011801 193 KGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGL 272 (477)
Q Consensus 193 k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~ 272 (477)
++++++|||||||.+++++++.+++ +++++ +|+||+|.++.+++. ..+....+. ..+++++++||||.||+
T Consensus 150 ~~~~l~nP~NPTG~~~~~~~l~~l~---~~~~~-~IiDE~y~~~~~~~~-~~s~~~~~~----~~~~vi~i~S~SK~~~l 220 (360)
T PRK07392 150 DGLLLNNPHNPTGKLWSREAILPLL---EQFAL-VVVDEAFMDFLPPDA-EQSLIPCLA----EYPNLIILRSLTKFYSL 220 (360)
T ss_pred CEEEEeCCCCCCCCCcCHHHHHHHH---HHCCE-EEEECchhhhccCcc-ccchHHHhh----cCCCEEEEEechhhhcC
Confidence 8999999999999999977766554 56775 666999998876553 234433333 34789999999999999
Q ss_pred CCceEEEEEeCCHHHHHHHHHhcccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEecCC
Q 011801 273 PGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLKSN 351 (477)
Q Consensus 273 ~G~RvG~i~~~~~~i~~~~~~~~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~~~ 351 (477)
||+|+||++++++.+ +.+.+....+.+|.++|.++..+|++.++ .+..++.++++++.+.+.|+++ |+.+.+ .
T Consensus 221 ~GlRiG~~v~~~~~~-~~~~~~~~~~~~s~~~q~~~~~~l~~~~~----~~~~~~~~~~~r~~l~~~L~~~~~~~~~~-~ 294 (360)
T PRK07392 221 PGLRLGYAIAHPDRL-QRWQQWRDPWPVNGLAAAAAIAALADRDF----QQQTWAWLPPAREALFQGLASLPGLTPLP-S 294 (360)
T ss_pred CchheeeeeCCHHHH-HHHHhhCCCCCCCHHHHHHHHHHhccHHH----HHHHHHHHHHHHHHHHHHHHhCCCcEECC-C
Confidence 999999999966544 44555555566899999999999988665 4445567888899999999887 777655 6
Q ss_pred ceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHh
Q 011801 352 AGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQ 425 (477)
Q Consensus 352 ~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~ 425 (477)
+|+|+|++++. +..+++..+++++||.|.||..|+..+++||||+++. .++.+++.+.|++++.
T Consensus 295 ~~~fl~~~~~~--------~~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~~--~~~~~~l~~al~~~~~ 358 (360)
T PRK07392 295 AANFLLVQSQG--------SALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVRT--EAENQRLLEALAAILA 358 (360)
T ss_pred CCCEEEEEcCC--------CHHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeCC--HHHHHHHHHHHHHHhh
Confidence 78999998873 1236778888888999999999976567899999984 5555666666666554
No 71
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=9.9e-46 Score=373.36 Aligned_cols=327 Identities=19% Similarity=0.306 Sum_probs=262.1
Q ss_pred Ccccccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEE
Q 011801 37 PGGVIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIV 115 (477)
Q Consensus 37 ~~~~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~ 115 (477)
+.++|+|+.++|+++ ++.+.+.+.+.. .....|++ .|.++||+++|++++ +++++|+
T Consensus 29 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~-------------~~~~~Y~~-~~~~~lr~~ia~~~~--------~~~~~I~ 86 (357)
T PRK14809 29 PDDLVKLSSNENPHGPSPAAVEAIREAA-------------ERVHSYPK-ASHADLTAALADRWD--------VSPEQVW 86 (357)
T ss_pred ccceeEecCCCCCCCCCHHHHHHHHHHH-------------hhhhcCCC-CCHHHHHHHHHHHhC--------CCcceEE
Confidence 557999999999985 455666665531 13457875 588999999999985 6899999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEE
Q 011801 116 MGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGL 195 (477)
Q Consensus 116 ~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~v 195 (477)
+|+|+++++.++++++++|||.|++++|+|+.+...+... |.+++.++++.+++|.++.+++++++. ++|+|
T Consensus 87 it~G~~~al~~~~~~~~~~gd~V~v~~P~y~~~~~~~~~~-g~~~~~~~l~~~~~~~~~~~~~~~~~~-------~~k~i 158 (357)
T PRK14809 87 LANGGDGALDYLARAMLDPGDTVLVPDPGFAYYGMSARYH-HGEVREYPVSKADDFEQTADTVLDAYD-------GERIV 158 (357)
T ss_pred ECCCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHc-CCeEEEEecccCcCCCcCHHHHHHhhc-------CCcEE
Confidence 9999999999999999999999999999999887777666 999999998766678888877766542 57899
Q ss_pred EEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCc
Q 011801 196 IITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGF 275 (477)
Q Consensus 196 ii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~ 275 (477)
++||||||||.+++.+++++|+++|++ +++||+||+|.++.+.. +.....+ ..+++++++||||.||+||+
T Consensus 159 ~l~~p~NPTG~~~s~~~~~~l~~~~~~-~~~iI~De~y~~~~~~~----~~~~~~~----~~~~vi~~~SfSK~~~~~Gl 229 (357)
T PRK14809 159 YLTSPHNPTGSEIPLDEVEALAERTDE-ETLVVVDEAYGEFAERP----SAVALVE----ERDDVAVLRTFSKAYGLAGL 229 (357)
T ss_pred EEeCCCCCCCcCCCHHHHHHHHHhCcc-CcEEEEechhhhccCCc----hhHHHHh----hCCCEEEEecchhHhcCcch
Confidence 999999999999999999999999875 78999999999876532 2222222 34789999999999999999
Q ss_pred eEEEEEeCCHHHHHHHHHhcccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEE
Q 011801 276 RVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLF 355 (477)
Q Consensus 276 RvG~i~~~~~~i~~~~~~~~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~ 355 (477)
|+||++++++. .+.+.+....+.++.++|.++..+|.+.+ ++++.++.++++++.+.+.|...++ +.+|+|
T Consensus 230 RiG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~l~~~~----~~~~~~~~~~~~r~~l~~~L~~~~~----~~~g~f 300 (357)
T PRK14809 230 RLGYAVVPEEW-ADAYARVNTPFAASELACRAGLAALDDDE----HVERTVETARWAREYIREELDAPTW----ESAGNF 300 (357)
T ss_pred hheeeecCHHH-HHHHHHhCCCCCCCHHHHHHHHHHhCCHH----HHHHHHHHHHHHHHHHHHHhcCccC----CCCCCE
Confidence 99999996654 44444444445578899999999998744 4667778888899999999875432 467799
Q ss_pred EEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHh
Q 011801 356 FWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQ 425 (477)
Q Consensus 356 ~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~ 425 (477)
+|++++. +.++.+.+ .++||.|.||+.|+. ++||||+++ +++++++++++|+++++
T Consensus 301 ~~~~~~~---------~~~~~~~l-~~~gv~v~~g~~f~~--~~~iRls~~--~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 301 VLAEVGD---------ASAVAEAA-QERGVIVRDCTSFGL--PECIRITCG--TREETERAVEVLNEVLA 356 (357)
T ss_pred EEEECCC---------HHHHHHHH-HHCCEEEEECccCCC--CCeEEEecC--CHHHHHHHHHHHHHHhc
Confidence 9998852 12466654 567999999999963 589999997 57899999999999875
No 72
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.2e-45 Score=372.92 Aligned_cols=340 Identities=21% Similarity=0.277 Sum_probs=263.4
Q ss_pred ccccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEe
Q 011801 39 GVIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMG 117 (477)
Q Consensus 39 ~~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t 117 (477)
++++|+.|+|+++ ++.+.+.+++.-.. + .....|++ .|.++||++||+|+++.++.++.+++++|++|
T Consensus 29 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~------~----~~~~~Y~~-~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it 97 (374)
T PRK02610 29 QLDRLDTNEFPYDLPPDLKQKLAWLYQQ------G----IESNRYPD-GGHEALKQAIAEYVNESAAGSSQITPANISVG 97 (374)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhh------c----ccccCCCC-CchHHHHHHHHHHhCccccccCCCCHHHEEEc
Confidence 4799999999985 45666666652110 0 01346866 69999999999999987654577899999999
Q ss_pred CChHHHHHHHHHHhcCCCC-eEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEE
Q 011801 118 GGATGANELIMFCLANPGD-AFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLI 196 (477)
Q Consensus 118 ~G~t~al~~i~~~l~~~Gd-~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vi 196 (477)
+|+++++..++.+++.+|| .|++++|+|+.|...++.. |++++.++++. ++|.+|+++|++++++.. ..++|+|+
T Consensus 98 ~Ga~~al~~~~~~~~~~g~~~Vlv~~P~y~~~~~~~~~~-g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~--~~~~k~i~ 173 (374)
T PRK02610 98 NGSDELIRSLLIATCLGGEGSILVAEPTFSMYGILAQTL-GIPVVRVGRDP-ETFEIDLAAAQSAIEQTQ--NPPVRVVF 173 (374)
T ss_pred CChHHHHHHHHHHHcCCCCCeEEEcCCChHHHHHHHHHc-CCEEEEecCCc-ccCCCCHHHHHHHHHhhc--CCCceEEE
Confidence 9999999988888877886 8999999999999988877 99999999864 468999999999886421 13789999
Q ss_pred EeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCce
Q 011801 197 ITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFR 276 (477)
Q Consensus 197 i~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~R 276 (477)
+||||||||++++.+++++|+++| ++++||+||+|.++.+ . ..+..+ . ..+++++++||||.+|+||+|
T Consensus 174 l~~P~NPTG~~~s~~~l~~l~~~~--~~~~iI~De~Y~~~~~--~--~~~~~~-~----~~~~~ivi~SfSK~~g~~GlR 242 (374)
T PRK02610 174 VVHPNSPTGNPLTAAELEWLRSLP--EDILVVIDEAYFEFSQ--T--TLVGEL-A----QHPNWVILRTFSKAFRLAAHR 242 (374)
T ss_pred EeCCCCCCCCCCCHHHHHHHHhcc--CCcEEEEeccccccCc--c--chHHHH-h----cCCCEEEEEecchhccCcccc
Confidence 999999999999999999999876 4999999999997532 1 122222 2 235788899999999999999
Q ss_pred EEEEEeCCHHHHHHHHHhcccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEecCCceEE
Q 011801 277 VGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLKSNAGLF 355 (477)
Q Consensus 277 vG~i~~~~~~i~~~~~~~~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~~~~g~~ 355 (477)
+||++++++ +.+.+.+....+.+++++|.++..+|++.+ .+++..++.++ +++.+.+.|+++ ++.+. +++|+|
T Consensus 243 iG~~v~~~~-l~~~l~~~~~~~~~~~~~q~a~~~~l~~~~---~~~~~~~~~~~-~r~~l~~~L~~~~~~~~~-p~~g~f 316 (374)
T PRK02610 243 VGYAIGHPE-LIAVLEKVRLPYNLPSFSQLAAQLALEHRQ---ELLAAIPEILQ-ERDRLYQALQELPQLRVW-PSAANF 316 (374)
T ss_pred eeeeecCHH-HHHHHHHhcCCCCCCHHHHHHHHHHhcCHH---HHHHHHHHHHH-HHHHHHHHHHhCCCcEeC-CCcceE
Confidence 999998554 555555554445688999999999998753 34555444444 467788888876 66654 677899
Q ss_pred EEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhh
Q 011801 356 FWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 356 ~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~ 426 (477)
+|++++...+ ..++++.+ .++||.|.++ ++++||+++ +++++++++++|++++.+
T Consensus 317 ~~~~l~~~~~------~~~~~~~l-~~~gi~v~~~-------~~~lRls~~--~~~~~~~~l~~l~~~l~~ 371 (374)
T PRK02610 317 LYLRLSQDAA------LAALHQAL-KAQGTLVRHT-------GGGLRITIG--TPEENQRTLERLQAALTQ 371 (374)
T ss_pred EEEeCCCCCC------HHHHHHHH-HHCCEEEEeC-------CCeEEEeCC--CHHHHHHHHHHHHHHHhh
Confidence 9999985321 23566665 5679999864 468999998 467799999999999865
No 73
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1.5e-45 Score=368.16 Aligned_cols=315 Identities=16% Similarity=0.267 Sum_probs=250.4
Q ss_pred cccccccccccccHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeC
Q 011801 39 GVIQLGLAENQLCFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGG 118 (477)
Q Consensus 39 ~~i~l~~~~n~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~ 118 (477)
.+|+|+.|||+++. ...+..||+.+ ..+||+++|++++ +++++|++|+
T Consensus 17 ~~i~l~~Nenp~~~-----------------------~~~~~~Yp~~~-~~~lr~~ia~~~~--------~~~~~I~it~ 64 (332)
T PRK06425 17 RIIDFSANINDFMD-----------------------IGDISIYPEIS-YTDIEDQIKIYTQ--------GLKIKVLIGP 64 (332)
T ss_pred CEEEeccccCCCcC-----------------------hhhcccCcCcC-HHHHHHHHHHHhC--------CCcceEEECC
Confidence 57999999999841 12356798765 6999999999997 5789999999
Q ss_pred ChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEe
Q 011801 119 GATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIIT 198 (477)
Q Consensus 119 G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~ 198 (477)
|+++++.+++. +++||+ |++++|+|+.|...++.. |++++++|++. +.++.+.+++ .++|+|++|
T Consensus 65 Gs~~~l~~~~~-~~~~~~-vv~~~P~y~~y~~~~~~~-G~~v~~vp~~~---~~~~~~~l~~---------~~~k~v~l~ 129 (332)
T PRK06425 65 GLTHFIYRLLS-YINVGN-IIIVEPNFNEYKGYAFTH-GIRISALPFNL---INNNPEILNN---------YNFDLIFIV 129 (332)
T ss_pred CHHHHHHHHHH-HhCCCc-EEEeCCChHHHHHHHHHc-CCeEEEEeCCc---ccCcHHHHhh---------cCCCEEEEe
Confidence 99999999997 467775 777799999999999887 99999999863 3455444431 178899999
Q ss_pred CCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEE
Q 011801 199 NPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVG 278 (477)
Q Consensus 199 nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG 278 (477)
|||||||.+++.+++++|+++|++++++||+||+|.++.++.. .+...... ..+++++++||||.+|+||+|+|
T Consensus 130 nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~--~~~~~~~~----~~~~vi~~~SfSK~~~l~GlRiG 203 (332)
T PRK06425 130 SPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRA--EEDVLLNR----SYGNVIIGRSLTKILGIPSLRIG 203 (332)
T ss_pred CCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccccc--hhHHHHhc----cCCCEEEEeecHHhcCCchhhhe
Confidence 9999999999999999999999999999999999998765432 24444433 44789999999999999999999
Q ss_pred EEEeCCHHHHHHHHHhcccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEe
Q 011801 279 IVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWM 358 (477)
Q Consensus 279 ~i~~~~~~i~~~~~~~~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~ 358 (477)
|++++++ +.+.+.+....+.++..++.++. ..+. +.++++.++.++++++.+.+.|++.|+.+..+.+|+|+|+
T Consensus 204 y~v~~~~-li~~l~~~~~~~~~~~~~~~~l~----~~~~-~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~~g~f~~~ 277 (332)
T PRK06425 204 YIATDDY-NMKISRKITEPWSVCDPAIDFIR----SIDL-DYVAKHSLDIMENERSYLINNLEAMGFRAAGDPSANFITF 277 (332)
T ss_pred eeecCHH-HHHHHHHcCCCCccCHHHHHHHH----Hhhh-HHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCceEEEE
Confidence 9999655 55555555555545555443332 2222 4556777889999999999999999988765556789999
Q ss_pred eccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHH
Q 011801 359 DLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFV 424 (477)
Q Consensus 359 ~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~ 424 (477)
+++. ..++.+.+++ +||.|+||+.|+..+++|+||+++ ++++++.++++|++++
T Consensus 278 ~~~~---------~~~~~~~l~~-~gi~v~~~~~f~~~~~~~iRis~~--~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 278 MIPD---------AHDFYSYLLK-NGILVRLLDDYECLGEQYIRIAIR--RRSFNIKLVNALRNFL 331 (332)
T ss_pred EcCC---------HHHHHHHHHH-CCeEEEECCCCCCCCCCEEEEEeC--CHHHHHHHHHHHHHHh
Confidence 9861 1256777765 599999999997656789999999 6889999999999875
No 74
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.9e-45 Score=373.13 Aligned_cols=334 Identities=21% Similarity=0.296 Sum_probs=269.1
Q ss_pred Ccccccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEE
Q 011801 37 PGGVIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIV 115 (477)
Q Consensus 37 ~~~~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~ 115 (477)
+.++|+|+.++|++. ++.+.+.+.+.. .....|++..| .+||+++|++++ +++++|+
T Consensus 35 ~~~~i~l~~~~~~~~~~~~~~~al~~~~-------------~~~~~Y~~~~g-~~lr~~ia~~~~--------~~~~~i~ 92 (371)
T PRK05166 35 VPRIAKLGSNENPLGPSPAVRRAFADIA-------------ELLRLYPDPQG-RALREAIAARTG--------VPADRII 92 (371)
T ss_pred CcceEEcCCCCCCCCCCHHHHHHHHHHH-------------HHhhcCCCCcH-HHHHHHHHHHhC--------cCHHHEE
Confidence 447899999999974 455666665421 23567999988 599999999985 5789999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEE
Q 011801 116 MGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGL 195 (477)
Q Consensus 116 ~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~v 195 (477)
+|+|+++++..++.+++++||.|+++.|+|+.+...++.. |+++++++++. ++++|++++++++++ ++|+|
T Consensus 93 ~t~G~~~~l~~~~~~~~~~gd~vli~~P~y~~~~~~~~~~-g~~~~~v~~~~--~~~~~~~~l~~~~~~------~~~~v 163 (371)
T PRK05166 93 LGNGSEDLIAVICRAVLRPGDRVVTLYPSFPLHEDYPTMM-GARVERVTVTP--DLGFDLDALCAAVAR------APRML 163 (371)
T ss_pred EcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHc-CCeEEEeecCC--CCCCCHHHHHHhhhc------CCCEE
Confidence 9999999999999999999999999999999988877776 99999999864 468899999988864 67899
Q ss_pred EEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCc
Q 011801 196 IITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGF 275 (477)
Q Consensus 196 ii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~ 275 (477)
+++|||||||.+++.+++++|+++|++ +++||+||+|.++.++. .+.+......+ ..+++++++||||.||+||+
T Consensus 164 ~l~~p~NPtG~~~~~~~~~~l~~~~~~-~~~ii~De~y~~~~~~~-~~~~~~~~~~~---~~~~vi~i~SfSK~~~l~Gl 238 (371)
T PRK05166 164 MFSNPSNPVGSWLTADQLARVLDATPP-ETLIVVDEAYAEYAAGD-DYPSALTLLKA---RGLPWIVLRTFSKAYGLAGL 238 (371)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHhCCC-CcEEEEECcHHHhcCCc-CcccHHHHHhh---cCCCEEEEeechHhhhcchh
Confidence 999999999999999999999999874 88999999999877543 23344333321 23579999999999999999
Q ss_pred eEEEEEeCCHHHHHHHHHhcccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEE
Q 011801 276 RVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLF 355 (477)
Q Consensus 276 RvG~i~~~~~~i~~~~~~~~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~ 355 (477)
|+||++++++.+.+.+.+....+.++.++|.++..+|.+.++ +++.++.++++++.+.+.|++.|+.+. +.+|+|
T Consensus 239 RiG~~i~~~~~l~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~----~~~~~~~~~~~r~~l~~~L~~~g~~~~-p~~g~f 313 (371)
T PRK05166 239 RVGYGLVSDPELVGLLDRVRTPFNVNGAAQAAALAALDDEEH----LAKGVALALAERERLKKELAEMGYRIA-PSRANF 313 (371)
T ss_pred heeeeecCCHHHHHHHHHhccCCCCCHHHHHHHHHHhcCHHH----HHHHHHHHHHHHHHHHHHHHHCcCeeC-CCcCCE
Confidence 999988867777776666555566899999888888877544 666677888899999999999898765 456789
Q ss_pred EEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHH
Q 011801 356 FWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFV 424 (477)
Q Consensus 356 ~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~ 424 (477)
+|++++.. ..++++.+++ +||.+.||..++ .++||||+++ +.++++.+++.|+.++
T Consensus 314 l~~~~~~~--------~~~l~~~l~~-~gi~v~p~~~~~--~~~~iRi~~~--~~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 314 LFFDARRP--------ASAVAEALLR-QGVIVKPWKQPG--FETFIRVSIG--SPEENDHFVAALDKVL 369 (371)
T ss_pred EEEeCCCC--------HHHHHHHHHH-CCeEEecCCCCC--CCCeEEEEcC--CHHHHHHHHHHHHHHh
Confidence 99997631 2357777775 499999997654 3789999999 5677788888777664
No 75
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=2.2e-45 Score=371.76 Aligned_cols=335 Identities=22% Similarity=0.358 Sum_probs=263.6
Q ss_pred CCCcccccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCc-cCCC
Q 011801 35 QNPGGVIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVT-FDPD 112 (477)
Q Consensus 35 ~~~~~~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~-~~~~ 112 (477)
.++.++|+|+.+++..+ ++.+.+.+.+.. ....|++..|.++||+++|+|+.+.+| +. ++++
T Consensus 24 ~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~--------------~~~~Y~~~~G~~~lr~~ia~~l~~~~~--~~~~~~~ 87 (364)
T PRK07865 24 AHPDGIVDLSVGTPVDPVPPVIQEALAAAA--------------DAPGYPTTAGTPELREAIVGWLARRRG--VTGLDPA 87 (364)
T ss_pred hcCCCEEEcCCCCCCCCCCHHHHHHHHHHH--------------hhCCCCCccCCHHHHHHHHHHHHHHcC--CCCCCcc
Confidence 44567899999865444 355566555421 124799989999999999999988766 44 7899
Q ss_pred cEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCC
Q 011801 113 RIVMGGGATGANELIMFCL-ANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASIN 191 (477)
Q Consensus 113 ~i~~t~G~t~al~~i~~~l-~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~ 191 (477)
+|++|+|+++++..++.++ +++||.|++++|+|+.|...++.. |++++.++. +++++. .+
T Consensus 88 ~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~~~~---------~~~l~~---------~~ 148 (364)
T PRK07865 88 AVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEVGARLA-GATVVRADS---------LTELGP---------QR 148 (364)
T ss_pred cEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHHHHHhc-CCEEEecCC---------hhhCCc---------cc
Confidence 9999999999999998888 799999999999999999888876 999887752 233321 27
Q ss_pred eeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHh-hhhccCCCCcEEEEecCCccc
Q 011801 192 IKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEV-IQEMDCNRDLIHIIYSLSKDM 270 (477)
Q Consensus 192 ~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~-~~~~~~~~~~viiv~SlSK~~ 270 (477)
+++|+++|||||||.+++.+++++|+++|+++|++||+||+|.++.++++. .+.... .. +...+++++++||||.+
T Consensus 149 ~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~-~~~~~~~~~--~~~~~~~i~~~S~SK~~ 225 (364)
T PRK07865 149 PALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEP-VSILDPRVC--GGDHTGLLAVHSLSKQS 225 (364)
T ss_pred ceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCC-Ccccccccc--CCccceEEEEeechhcc
Confidence 899999999999999999999999999999999999999999987776532 222110 00 00246899999999999
Q ss_pred CCCCceEEEEEeCCHHHHHHHHHh-cccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEec
Q 011801 271 GLPGFRVGIVYSFNDTVVNCGRKM-SSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLK 349 (477)
Q Consensus 271 g~~G~RvG~i~~~~~~i~~~~~~~-~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~ 349 (477)
|+||+|+||++++++.+....+.. ...+.++++.|.++..+|.+.+ ++++.++.++++++.+.+.|++.|+.+..
T Consensus 226 ~~~GlRiG~i~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~----~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 301 (364)
T PRK07865 226 NLAGYRAGFVAGDPALVAELLEVRKHAGMMVPAPVQAAMVAALGDDA----HVREQRERYARRRAVLRPALEAAGFRVDH 301 (364)
T ss_pred CCCceeeEEEecCHHHHHHHHHHHHhcCCCcCHHHHHHHHHHhCCHH----HHHHHHHHHHHHHHHHHHHHHHcCCcccC
Confidence 999999999999655444333222 2234578899999999998744 46677888999999999999999988888
Q ss_pred CCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHH
Q 011801 350 SNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIA 421 (477)
Q Consensus 350 ~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~ 421 (477)
+++|+|+|++++.. ..++++.+ .++||.|.||..|+...++|+||+++. +++++++++++|+
T Consensus 302 ~~~~~~~~~~~~~~--------~~~~~~~l-~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~~~~~~~~l~ 363 (364)
T PRK07865 302 SEAGLYLWATRGED--------CWDTVAWL-AERGILVAPGDFYGPAGAQHVRVALTA-TDERIAAAVERLA 363 (364)
T ss_pred CCccEEEEEeCCCC--------HHHHHHHH-HHCCEEEeCccccCcCCCCEEEEEecC-CHHHHHHHHHHhh
Confidence 89999999987421 11344444 567999999998876567899999986 7899999999986
No 76
>PLN02368 alanine transaminase
Probab=100.00 E-value=2.9e-45 Score=373.36 Aligned_cols=280 Identities=23% Similarity=0.402 Sum_probs=233.4
Q ss_pred ccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhc-CCCCeEEEcCCCccchHHHHhhhCC
Q 011801 79 IAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLA-NPGDAFLVPSPYYAAFDRDLSWRTG 157 (477)
Q Consensus 79 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~-~~Gd~vlv~~P~y~~~~~~~~~~~g 157 (477)
...|++..|.++||++||+|+.+.+| +.+++++|++|+|+++++..++.+++ +|||.|++++|+|+.|...++.. |
T Consensus 100 ~~~Y~~~~G~~~LR~aia~~~~~~~g--~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~~~~~~-g 176 (407)
T PLN02368 100 LGAYSDSRGLPGVRKEVAEFIERRDG--YPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSATISLL-G 176 (407)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHhcC--CCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHHHHHHc-C
Confidence 56799999999999999999987766 56789999999999999999999987 79999999999999999998877 9
Q ss_pred cEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccc
Q 011801 158 VQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATV 237 (477)
Q Consensus 158 ~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~ 237 (477)
.++++++++.+++|.+|+++|++++++....+.++|+++++|||||||.+++.+++++|+++|+++|++||+||+|.++.
T Consensus 177 ~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~ 256 (407)
T PLN02368 177 GTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNI 256 (407)
T ss_pred CEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccc
Confidence 99999999877789999999999997544444578999999999999999999999999999999999999999999998
Q ss_pred cCCC-CcccHHHhhhhcc--C-CCCcEEEEecCCccc-CCCCceEEEEEe--CCHHHHHHHHHh-cccCCCchHHHHHHH
Q 011801 238 FSSP-KFTSVAEVIQEMD--C-NRDLIHIIYSLSKDM-GLPGFRVGIVYS--FNDTVVNCGRKM-SSFGLVSSQTQYLLA 309 (477)
Q Consensus 238 ~~~~-~~~s~~~~~~~~~--~-~~~~viiv~SlSK~~-g~~G~RvG~i~~--~~~~i~~~~~~~-~~~~~vs~~~q~~~~ 309 (477)
|++. .+.|+.+++.+.+ . ..+++++++||||.| |+||+|+||+++ .++.+.+.+.+. ...+.++.++|.++.
T Consensus 257 y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~~~~~~~~~~~~Q~aa~ 336 (407)
T PLN02368 257 YQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKVASIALSPNVSGQIFMG 336 (407)
T ss_pred cCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHHhcccCCCCcHHHHHHH
Confidence 8764 5667665532211 0 135899999999998 899999999995 244454444443 234457889999999
Q ss_pred HhcCChh----hHHHH---HHHHHHHHHHHHHHHHHHHhhC-CCeEecCCceEEEEeecc
Q 011801 310 SMLSDDE----FVDNF---LVETSKRLAKRHHNFTKGLEQV-GINCLKSNAGLFFWMDLR 361 (477)
Q Consensus 310 ~~L~~~~----~~~~~---~~~~~~~l~~r~~~l~~~L~~~-gi~~~~~~~g~~~~~~l~ 361 (477)
.+|.+.+ .++.+ .++..+.+++|++.+.+.|.++ |+.|..|+||||+|++++
T Consensus 337 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P~Gafy~~~~i~ 396 (407)
T PLN02368 337 LMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCNFTEGAMYSFPQIK 396 (407)
T ss_pred HHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCCCCeeeEeccCCC
Confidence 9997531 11222 3456789999999999999997 999999999999997665
No 77
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1e-44 Score=368.39 Aligned_cols=328 Identities=20% Similarity=0.273 Sum_probs=260.9
Q ss_pred Ccccccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEE
Q 011801 37 PGGVIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIV 115 (477)
Q Consensus 37 ~~~~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~ 115 (477)
+.++|+|+.|+|+++ ++.+.+.+... .....|++. +.++||++||++++ +++++|+
T Consensus 51 ~~~~i~l~~n~~p~~~~~~v~~a~~~~--------------~~~~~Yp~~-~~~~lr~~ia~~~~--------~~~~~I~ 107 (380)
T PLN03026 51 PEDIVKLDANENPYGPPPEVLEALGNM--------------KFPYVYPDP-ESRRLRAALAEDSG--------LESENIL 107 (380)
T ss_pred ccceEEccCCCCCCCCCHHHHHHHHhh--------------HhhccCCCC-CHHHHHHHHHHHhC--------cChhhEE
Confidence 457899999999985 45566655431 123458765 68999999999986 5789999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEE
Q 011801 116 MGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGL 195 (477)
Q Consensus 116 ~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~v 195 (477)
+|+|+++++..++.+++++||.|++++|+|+.|...++.. |++++.++.+ .+|.+|+++++++++. .++++|
T Consensus 108 ~t~Ga~~~i~~~~~~~~~~gd~Vlv~~P~y~~y~~~~~~~-g~~~~~v~~~--~~~~~d~~~l~~~~~~-----~~~~~v 179 (380)
T PLN03026 108 VGCGADELIDLLMRCVLDPGDKIIDCPPTFGMYVFDAAVN-GAEVIKVPRT--PDFSLDVPRIVEAVET-----HKPKLL 179 (380)
T ss_pred EcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHc-CCEEEEeecC--CCCCcCHHHHHHHHhc-----cCCcEE
Confidence 9999999999999999999999999999999888877766 9999999975 3688999999988842 278999
Q ss_pred EEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCc
Q 011801 196 IITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGF 275 (477)
Q Consensus 196 ii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~ 275 (477)
+++|||||||++++.+++++|++.+ ++||+||+|.++.+.. .. ...+. ..+++++++||||.||++|+
T Consensus 180 ~l~~P~NPTG~~~~~~~l~~l~~~~----~~vi~DeaY~~~~~~~-~~---~~~~~----~~~~viv~~SfSK~~glaGl 247 (380)
T PLN03026 180 FLTSPNNPDGSIISDDDLLKILELP----ILVVLDEAYIEFSTQE-SR---MKWVK----KYDNLIVLRTFSKRAGLAGL 247 (380)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHhcC----CEEEEECcchhhcCCc-ch---HHHHH----hCCCEEEEecchHhhcCccc
Confidence 9999999999999999999988753 8999999999865432 11 12222 35789999999999999999
Q ss_pred eEEEEEeCCHHHHHHHHHhcccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEE
Q 011801 276 RVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLF 355 (477)
Q Consensus 276 RvG~i~~~~~~i~~~~~~~~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~ 355 (477)
|+||++++++ +.+.+.+....+.++.++|.++.++|.+.++ +++.++.++++++.+.+.|++++.....+.+|+|
T Consensus 248 RiGy~~~~~~-~i~~l~~~~~~~~~~~~~q~aa~~aL~~~~~----~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~~~f 322 (380)
T PLN03026 248 RVGYGAFPLS-IIEYLWRAKQPYNVSVAAEVAACAALSNPKY----LEDVKNALVEERERLFGLLKEVPFLEPYPSDANF 322 (380)
T ss_pred cceeeecCHH-HHHHHHHhcCCCCCCHHHHHHHHHHhhCHHH----HHHHHHHHHHHHHHHHHHHHHCCCCeECCCCCeE
Confidence 9999999655 4455555555566899999999999987554 6677888999999999999988633335667799
Q ss_pred EEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHH
Q 011801 356 FWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAF 423 (477)
Q Consensus 356 ~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~ 423 (477)
+|++++...+ ..+++..++ ++||.|++|+.+ ..++|+|||++ +.++++.+++.|+++
T Consensus 323 ~~~~~~~~~~------~~~~~~~l~-~~gI~v~~~~~~--~~~~~lRis~~--~~~~~~~l~~al~~~ 379 (380)
T PLN03026 323 ILCRVTSGRD------AKKLKEDLA-KMGVMVRHYNSK--ELKGYIRVSVG--KPEHTDALMEALKQL 379 (380)
T ss_pred EEEECCCCCC------HHHHHHHHH-HCCeEEEECCCC--CCCCEEEEecC--CHHHHHHHHHHHHHh
Confidence 9999874221 225666666 669999998763 34679999999 577888888888754
No 78
>PRK08637 hypothetical protein; Provisional
Probab=100.00 E-value=2.8e-44 Score=366.62 Aligned_cols=344 Identities=18% Similarity=0.221 Sum_probs=266.5
Q ss_pred ccHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCc-cCCCcEEEeCChHHHHHHHH
Q 011801 50 LCFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVT-FDPDRIVMGGGATGANELIM 128 (477)
Q Consensus 50 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~-~~~~~i~~t~G~t~al~~i~ 128 (477)
...+.+.+.+.+... .....|++..|.++||+++++++.+..+ .+. .+.++|++|+|+++++.+++
T Consensus 20 ~~~~~~~~~~~~~~~------------~~~~~Y~~~~G~~~lr~~ia~~~~~~~~-~~~~~~~~~I~it~G~~~al~~~~ 86 (388)
T PRK08637 20 MYLSSLQDLLNDLTP------------DEIFPYAPPQGIPELRDLWQEKMLRENP-SLSGKKMSLPIVTNALTHGLSLVA 86 (388)
T ss_pred chHHHHHHHHHhhcc------------ccccCCCCCCCCHHHHHHHHHHHhccCc-cccccccceeeEccchHHHHHHHH
Confidence 455666666554211 2456899999999999999999876543 122 12368999999999999999
Q ss_pred HHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCC
Q 011801 129 FCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTL 208 (477)
Q Consensus 129 ~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~ 208 (477)
.++++|||.|++++|+|+.|...+....|++++++++.. +++++|+++++++++... ....++++++|||||||.++
T Consensus 87 ~~l~~~gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~-~~~~~d~~~l~~~~~~~~--~~~~~~~~~~~P~NPTG~~~ 163 (388)
T PRK08637 87 DLFVDQGDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFD-EDGGFDTDALKEALQAAY--NKGKVIVILNFPNNPTGYTP 163 (388)
T ss_pred HHhcCCCCEEEEcCCCCccHHHHHHHhcCCEEEEecccC-CCCcCCHHHHHHHHHhhc--cCCCEEEEEeCCCCCCCCCC
Confidence 999999999999999999999875432399999999842 235689999999887321 11445678899999999999
Q ss_pred CHHHHHHHHHHHHh-----cCeEEEecccccccccCCCCcccHH-HhhhhccCCCCcE--EEEecCCcccCCCCceEEEE
Q 011801 209 DRDTLKSLVSFIND-----KNIHLVCDEIYAATVFSSPKFTSVA-EVIQEMDCNRDLI--HIIYSLSKDMGLPGFRVGIV 280 (477)
Q Consensus 209 ~~~~l~~l~~~~~~-----~~~~lI~De~y~~~~~~~~~~~s~~-~~~~~~~~~~~~v--iiv~SlSK~~g~~G~RvG~i 280 (477)
+.+++++|+++|++ ++++||+||+|.++.|++....++. .+.+ ..+++ ++++||||.+++||+|+||+
T Consensus 164 s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~----~~~~vi~i~~~s~SK~~~~pGlRlG~~ 239 (388)
T PRK08637 164 TEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALAN----LHSNILAVKLDGATKEEFVWGFRVGFI 239 (388)
T ss_pred CHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhc----ccccceEEEeccccccCCCcccceEEE
Confidence 99999999999875 8999999999999888765544432 2222 23564 44569999999999999999
Q ss_pred EeCC-----HHHHHHHHH-h-----cccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC----CC
Q 011801 281 YSFN-----DTVVNCGRK-M-----SSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV----GI 345 (477)
Q Consensus 281 ~~~~-----~~i~~~~~~-~-----~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~----gi 345 (477)
+.++ +.+.+.+.+ . ...+.+|.++|.++..+|+++.+ .+++++.+..++++++.+.+.|.+. ++
T Consensus 240 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~-~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~ 318 (388)
T PRK08637 240 TFGTKAGSSQTVKEALEKKVKGLIRSNISNGPHPSQSAVLRALNSPEF-DKEKQEKFQILKERYEKTKEVLYDGKYDDAW 318 (388)
T ss_pred EEccccCCcHHHHHHHHHHHHHHhhcccCCCCcHHHHHHHHHhCCHHH-HHHHHHHHHHHHHHHHHHHHHHHhhCCCCCc
Confidence 9753 444444332 1 23445889999999999998877 6677777888999999999888765 57
Q ss_pred eEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHh
Q 011801 346 NCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQ 425 (477)
Q Consensus 346 ~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~ 425 (477)
.+.++++|+|+|++++. . +..++++.+++++||.+.++ +++|+||+|+..+++++++++++|+++++
T Consensus 319 ~~~~~~~g~~~~~~l~~-~------~~~~l~~~l~~~~gv~~~~~------~~~~iRi~~~~~~~~~i~~~~~~l~~~~~ 385 (388)
T PRK08637 319 QAYPFNSGYFMCLKLKG-V------DAEELRVHLLEKYGIGTIAL------NETDLRIAFSCVEEEDIPELFDSIYKAIK 385 (388)
T ss_pred ccccccceEEEEecCCh-H------HHHHHHHHHhhhcceEEEec------cCCceEEEeecCCHHHHHHHHHHHHHHHH
Confidence 78888999999999973 1 12368888887889988742 35789999998889999999999999997
Q ss_pred hh
Q 011801 426 QD 427 (477)
Q Consensus 426 ~~ 427 (477)
..
T Consensus 386 ~~ 387 (388)
T PRK08637 386 DL 387 (388)
T ss_pred hc
Confidence 53
No 79
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=100.00 E-value=2.3e-45 Score=378.21 Aligned_cols=373 Identities=18% Similarity=0.250 Sum_probs=269.1
Q ss_pred cchhhhhhcCCCCCCCCCCccccccccccccc-c--HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHH
Q 011801 19 YFDGWKAFDRNPFHPTQNPGGVIQLGLAENQL-C--FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAV 95 (477)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~i~l~~~~n~~-~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~ai 95 (477)
.|.++..+..+......+ .++|+|+.+.... + .+.+.+.++....... ....+..|++..|.++||++|
T Consensus 12 ~~~~~~~~~~~~~~~~~~-~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~Y~~~~G~~~LR~ai 83 (416)
T PRK09440 12 RHSGITQLMDDLNDGLRT-PGAIMLGGGNPAHIPEMEDYFRDLLADLLASGK-------LTEALGNYDGPQGKDELIEAL 83 (416)
T ss_pred hhhcHHHHHHHHHHHhcC-CCceeccCCCCCccCCHHHHHHHHHHHHhcCcc-------cccccccCCCCCCCHHHHHHH
Confidence 344455544444444433 5689999775432 2 2344554443211000 002346799999999999999
Q ss_pred HHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcC-----CCCeEEE-cCCCccchHHHHhhhCC----cEEEEEec
Q 011801 96 AKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLAN-----PGDAFLV-PSPYYAAFDRDLSWRTG----VQIVPVHC 165 (477)
Q Consensus 96 a~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~-----~Gd~vlv-~~P~y~~~~~~~~~~~g----~~~~~v~~ 165 (477)
|+|+.+.+| +.+++++|++|+|+++|+.+++.++++ +||.|++ ++|+|++|...+... | .....+++
T Consensus 84 a~~~~~~~g--~~v~~~~I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~-~~~~~~~~~~~~~ 160 (416)
T PRK09440 84 AALLNERYG--WNISPQNIALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEE-DLFVSYRPNIELL 160 (416)
T ss_pred HHHHHHHhC--CCCChhhEEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhcc-Cceeecccccccc
Confidence 999988777 557899999999999999999999985 6899999 799999998755422 2 21122233
Q ss_pred cCC-CCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcc
Q 011801 166 DIS-NNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFT 244 (477)
Q Consensus 166 ~~~-~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~ 244 (477)
+.+ .+|.+|+++|+ +. .++++++++|||||||++++.+++++|+++|+++|++||+||+|... +....+.
T Consensus 161 ~~~~~~~~~d~~~l~--~~------~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~-~~~~~~~ 231 (416)
T PRK09440 161 PEGQFKYHVDFEHLH--ID------EDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPP-FPGIIFS 231 (416)
T ss_pred cccccccCCCHHHcc--cC------CCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCcccc-CCCcchh
Confidence 221 14789998887 21 26789999999999999999999999999999999999999999753 2111111
Q ss_pred cHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhcc--cCCCchHHHHHHHHhcCChhhHHHHH
Q 011801 245 SVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSS--FGLVSSQTQYLLASMLSDDEFVDNFL 322 (477)
Q Consensus 245 s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~~--~~~vs~~~q~~~~~~L~~~~~~~~~~ 322 (477)
+.... ..+++++++||||. ++||+|+||++++++ +.+.+..... ...+|.++|.++..+|.++++ .+++
T Consensus 232 ~~~~~------~~~~vI~~~SfSK~-~~pGlRiG~~i~~~~-l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~-~~~~ 302 (416)
T PRK09440 232 EATPL------WNPNIILCMSLSKL-GLPGVRCGIVIADEE-IIEALSNMNGIISLAPGRLGPAIAAEMIESGDL-LRLS 302 (416)
T ss_pred hcCcc------ccCCeEEEeccccc-CCCcceEEEEeCCHH-HHHHHHHHHHHhccCCCcHHHHHHHHHhccchH-HHHH
Confidence 11110 24789999999996 899999999999655 4444443332 234788999999999999887 4444
Q ss_pred HH-HHHHHHHHHHHHHHHHhhC----CCeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCC
Q 011801 323 VE-TSKRLAKRHHNFTKGLEQV----GINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTE 397 (477)
Q Consensus 323 ~~-~~~~l~~r~~~l~~~L~~~----gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~ 397 (477)
.+ .++.++++++.+.+.|.+. ++.+..+++|+|+|++++... . .+.++++.+ .++||.|.||+.|+...
T Consensus 303 ~~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~p~gg~fiw~~~~~~~----~-~~~~~~~~l-~~~gV~v~pg~~F~~~~ 376 (416)
T PRK09440 303 ETVIRPFYRQKVQLAIALLRRYLPDEPCLIHKPEGAIFLWLWFKDLP----I-TTEELYQRL-KARGVLVVPGHYFFPGL 376 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCCeEEecCCCceEEEEECCCCC----C-CHHHHHHHH-HHCCEEEechHhhCCCC
Confidence 44 5777888888888888653 456678889999999998521 0 122566655 56799999999986421
Q ss_pred -------CCEEEEEeccCCHHHHHHHHHHHHHHHhhh
Q 011801 398 -------PGWFRVCFANMDDDTLQVALNRIAAFVQQD 427 (477)
Q Consensus 398 -------~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~~ 427 (477)
.+||||||+. +++++++++++|++++++.
T Consensus 377 ~~~~~~~~~~iRis~~~-~~~~l~~~i~~l~~~~~~~ 412 (416)
T PRK09440 377 DEDWPHAHQCIRMNYVQ-DDEEIEKGIAILAEEVEKA 412 (416)
T ss_pred ccccCCcCceEEEEecC-CHHHHHHHHHHHHHHHHHH
Confidence 3599999985 8999999999999999763
No 80
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.9e-44 Score=364.48 Aligned_cols=328 Identities=19% Similarity=0.262 Sum_probs=260.7
Q ss_pred ccccccccccccccHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEe
Q 011801 38 GGVIQLGLAENQLCFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMG 117 (477)
Q Consensus 38 ~~~i~l~~~~n~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t 117 (477)
.+.++++.++|+++++.. . ...+..|++.. .++||+++|++++ +++++|++|
T Consensus 31 ~~~~~~~~ne~~~~~~~~-----~--------------~~~~~~Y~~~~-~~~lr~~ia~~~~--------~~~~~I~~t 82 (364)
T PRK04781 31 QGDVWLNANESAWANPAD-----P--------------DASTRRYPDPQ-PPGLRSALAALYG--------CAPEQLLIG 82 (364)
T ss_pred CCCEEeeCCCCCCCCChh-----h--------------cchhccCCCCC-HHHHHHHHHHHhC--------cChHHEEEe
Confidence 367999999999865421 0 11356798775 6999999999985 678999999
Q ss_pred CChHHHHHHHHHHhcCCC-CeEEEcCCCccchHHHHhhhCCcEEEEEeccC-CCCcccCHHHHHHHHHHHHHhCCCeeEE
Q 011801 118 GGATGANELIMFCLANPG-DAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDI-SNNFKITREALEAAYERAQEASINIKGL 195 (477)
Q Consensus 118 ~G~t~al~~i~~~l~~~G-d~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~-~~~f~i~~~~l~~~~~~~~~~~~~~k~v 195 (477)
+|+++++.+++.+++.+| |.|++++|+|+.|...++.. |.++++++++. .++|.+|++++.+++.+ .++++|
T Consensus 83 ~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~~d~~~l~~~~~~-----~~~~lv 156 (364)
T PRK04781 83 RGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYAVCARLQ-NAPLVEVPLVDGADGFHADVPAIVAAALA-----SNAKLV 156 (364)
T ss_pred CCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHHc-CCEEEEEecCCCccCCCcCHHHHHHHHhc-----cCCeEE
Confidence 999999999999999999 79999999999888777766 99999999853 45788899988765532 278999
Q ss_pred EEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCc
Q 011801 196 IITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGF 275 (477)
Q Consensus 196 ii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~ 275 (477)
+++|||||||.+++.++++++++.|+ ++++||+||+|.++.+.. +...... ..+++++++||||.||+||+
T Consensus 157 ~l~~p~NPTG~~~~~~~~~~l~~~~~-~~~~iI~Deay~~f~~~~----~~~~~~~----~~~~vi~~~SfSK~~gl~Gl 227 (364)
T PRK04781 157 FLCSPSNPAGSAIALDQIERALQALQ-GKALVVVDEAYGEFSDVP----SAVGLLA----RYDNLAVLRTLSKAHALAAA 227 (364)
T ss_pred EEcCCCCCCCCCcCHHHHHHHHHhCC-CCcEEEEeCcchhhcCCc----chHHHHh----hCCCEEEEecChhhcccccc
Confidence 99999999999999999999999885 478999999999865421 2222333 45789999999999999999
Q ss_pred eEEEEEeCCHHHHHHHHHhcccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEecCCceE
Q 011801 276 RVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLKSNAGL 354 (477)
Q Consensus 276 RvG~i~~~~~~i~~~~~~~~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~~~~g~ 354 (477)
|+||+++++ .+.+.+.+....+.+++++|.++..+|+++++ + +..+..+.++++++.+.+.|+++ |+....+.+|+
T Consensus 228 RvGy~v~~~-~l~~~l~~~~~~~~~~~~~~~~a~~~l~~~~~-~-~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~ 304 (364)
T PRK04781 228 RIGSLIANA-ELIAVLRRCQAPYPVPTPCAALAEQALSAPAL-A-VTARRVAEVRAERERLHAALAQLPGVRRVYPSQGN 304 (364)
T ss_pred eeeeeeCCH-HHHHHHHhccCCCCCCHHHHHHHHHHHhcccH-H-HHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCc
Confidence 999999855 45566666665666899999999999988653 2 23445557889999999999988 66434466789
Q ss_pred EEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHH
Q 011801 355 FFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFV 424 (477)
Q Consensus 355 ~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~ 424 (477)
|+|++++.. .++.+.+ .++||.|+||..|.. .++|+||+++ ++++++.+++.|+++.
T Consensus 305 f~~~~~~~~---------~~~~~~l-~~~gI~v~~~~~~~~-~~~~~Ris~~--~~~~~~~l~~al~~~~ 361 (364)
T PRK04781 305 FLLVRFDDA---------EAAFQAL-LAAGVVVRDQRAAPR-LSDALRITLG--TPEQNDRVLAALQRTQ 361 (364)
T ss_pred EEEEEcCCH---------HHHHHHH-HHCCeEEeeCCCCCC-CCCeEEEeCC--CHHHHHHHHHHHHHHH
Confidence 999998721 1355554 467999999987753 3679999998 6888999999998764
No 81
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.7e-45 Score=368.17 Aligned_cols=328 Identities=20% Similarity=0.294 Sum_probs=264.1
Q ss_pred cccccccccccc-cHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEe
Q 011801 39 GVIQLGLAENQL-CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMG 117 (477)
Q Consensus 39 ~~i~l~~~~n~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t 117 (477)
++|+|+.|+|++ +++.+.+.+.+.. ... .|.+..|.+++|+++|++++ +++++|++|
T Consensus 30 ~~i~l~~n~~~~~~~~~v~~a~~~~~-------------~~~-~~~p~~g~~~lr~~ia~~~~--------~~~~~i~~t 87 (359)
T PRK03158 30 KIVKLASNENPYGPSPKVKEAIAAHL-------------DEL-ALYPDGYAPELRTKVAKHLG--------VDEEQLLFG 87 (359)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHH-------------HHh-hcCCCCcHHHHHHHHHHHhC--------CCHHHEEEC
Confidence 679999999998 4455666665531 122 34445689999999999985 578999999
Q ss_pred CChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEE
Q 011801 118 GGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLII 197 (477)
Q Consensus 118 ~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii 197 (477)
+|+++++..++++++++||.|++++|+|+.|...+... |.+++.++++ ++.+|++++++++.+ +++++++
T Consensus 88 ~G~~~~l~~~~~~~~~~gd~v~~~~p~y~~~~~~~~~~-g~~~~~~~~~---~~~~d~~~l~~~~~~------~~~~v~i 157 (359)
T PRK03158 88 AGLDEVIQMISRALLNPGTNTVMAEPTFSQYRHNAIIE-GAEVREVPLK---DGGHDLEAMLKAIDE------QTKIVWI 157 (359)
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCCHHHHHHHHHHc-CCeEEEEecC---CCCcCHHHHHHhcCC------CCCEEEE
Confidence 99999999999999999999999999999998888777 9999999986 457899999887643 7889999
Q ss_pred eCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceE
Q 011801 198 TNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRV 277 (477)
Q Consensus 198 ~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~Rv 277 (477)
+|||||||.+++.+++.++++.|+ +|++||+||+|.++.+.+.. .+.....+ ..+++++++||||.+|+||+|+
T Consensus 158 ~~p~NPtG~~~~~~~l~~~~~~~~-~~~~ii~De~y~~~~~~~~~-~~~~~~~~----~~~~vi~~~S~SK~~g~~GlRi 231 (359)
T PRK03158 158 CNPNNPTGTYVNHEELLSFLESVP-SHVLVVLDEAYYEYVTAEDY-PDTLPLLE----KYENLIVLRTFSKAYGLAALRV 231 (359)
T ss_pred eCCCCCCCCCCCHHHHHHHHHhCC-CCcEEEEECchHhhcCCccc-ccHHHHHH----hcCCEEEEEechHhhcCcchhh
Confidence 999999999999999999998874 69999999999987665432 22222333 3478999999999999999999
Q ss_pred EEEEeCCHHHHHHHHHhcccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEE
Q 011801 278 GIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFW 357 (477)
Q Consensus 278 G~i~~~~~~i~~~~~~~~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~ 357 (477)
||++++++. .+.+.+....+.+++++|.++..+|++.++ +++.++.++++++.+.+.|++.|+.+.++ +|+|+|
T Consensus 232 G~~v~~~~~-~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~g~~i~ 305 (359)
T PRK03158 232 GYGIASEEL-IEKLNIARPPFNTTRIAQYAAIAALEDQAF----LKECVEKNAEGLEQYYAFCKEYGLFYYPS-QTNFIF 305 (359)
T ss_pred ehhcCCHHH-HHHHHHhcCCCCCCHHHHHHHHHHhcCHHH----HHHHHHHHHHHHHHHHHHHHHCCCeeCCC-cCcEEE
Confidence 999996654 444444444456899999999999987655 45556667888888999998888877655 468999
Q ss_pred eeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHH
Q 011801 358 MDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAF 423 (477)
Q Consensus 358 ~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~ 423 (477)
++++. ...++++.+++ +||.|.||+.|+ .++|+||+++ +.++++.++++|+++
T Consensus 306 ~~~~~--------~~~~~~~~l~~-~gv~v~~g~~f~--~~~~iRi~~~--~~~~~~~l~~al~~~ 358 (359)
T PRK03158 306 VDTGR--------DANELFEALLK-KGYIVRSGAALG--FPTGVRITIG--LKEQNDKIIELLKEL 358 (359)
T ss_pred EECCC--------CHHHHHHHHHH-CCeEEeeCCCCC--CCCeEEEecC--CHHHHHHHHHHHHHh
Confidence 98852 12357777764 699999999996 3689999998 789999999999876
No 82
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=8.4e-45 Score=366.46 Aligned_cols=335 Identities=22% Similarity=0.365 Sum_probs=262.5
Q ss_pred CCCCcccccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCc-cCC
Q 011801 34 TQNPGGVIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVT-FDP 111 (477)
Q Consensus 34 ~~~~~~~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~-~~~ 111 (477)
..++..+|+|+.+++..+ ++.+.+.+.+. .....|++..|.++||+++++|+++.+| +. +++
T Consensus 17 ~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~--------------~~~~~Y~~~~G~~~lr~~ia~~~~~~~~--~~~~~~ 80 (357)
T TIGR03539 17 ASHPDGIVDLSVGTPVDPVPPLIRAALAAA--------------ADAPGYPQTWGTPELREAIVDWLERRRG--VPGLDP 80 (357)
T ss_pred hhCCCCeEEccCCCCCCCCCHHHHHHHHHH--------------HhhCCCCcccCCHHHHHHHHHHHHHhcC--CCCCCc
Confidence 456777899999865444 34455555432 1234699999999999999999988766 44 789
Q ss_pred CcEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCC
Q 011801 112 DRIVMGGGATGANELIMFCL-ANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASI 190 (477)
Q Consensus 112 ~~i~~t~G~t~al~~i~~~l-~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~ 190 (477)
++|++|+|+++++..++..+ .++||.|++++|+|+.+...++.. |++++.++ +.+++.. .
T Consensus 81 ~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~v~---------~~~~l~~---------~ 141 (357)
T TIGR03539 81 TAVLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYPTYEVGALLA-GATPVAAD---------DPTELDP---------V 141 (357)
T ss_pred CeEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcHHHHHHHHhc-CCEEeccC---------ChhhcCc---------c
Confidence 99999999999999998887 799999999999999998888876 99988774 1222221 2
Q ss_pred CeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCccc
Q 011801 191 NIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDM 270 (477)
Q Consensus 191 ~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~ 270 (477)
++++|+++||+||||.+++.+++++|+++|+++|++||+||+|.++.|+++. .+..... ..+...+++++++||||.+
T Consensus 142 ~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~-~~~~~~~-~~~~~~~~vi~~~S~SK~~ 219 (357)
T TIGR03539 142 GPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRP-VSILDPR-VCGGDHTGLLAVHSLSKRS 219 (357)
T ss_pred CccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCC-ccceecc-cCCCccccEEEEecccccc
Confidence 7889999999999999999999999999999999999999999987776532 2211100 0000246799999999999
Q ss_pred CCCCceEEEEEeCCHHHHHHHHHhc--ccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEe
Q 011801 271 GLPGFRVGIVYSFNDTVVNCGRKMS--SFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCL 348 (477)
Q Consensus 271 g~~G~RvG~i~~~~~~i~~~~~~~~--~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~ 348 (477)
|+||+|+||++++++.+ ..+.+.. ..+.++++.|.++..+|.+.. ++++.++.++++++.+.+.|++.|+.+.
T Consensus 220 ~~~G~R~G~~i~~~~~~-~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~~L~~~g~~~~ 294 (357)
T TIGR03539 220 NLAGYRAGFVAGDPALV-AELLTVRKHAGLMVPAPVQAAMVAALGDDG----HVAEQKARYAARRAQLKPALEKAGFRID 294 (357)
T ss_pred CCCceeEEEEecCHHHH-HHHHHHHhhcccCCCHHHHHHHHHHcCCHH----HHHHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 99999999999865544 4343332 234578899999999998743 3566788899999999999999998888
Q ss_pred cCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHH
Q 011801 349 KSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRI 420 (477)
Q Consensus 349 ~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l 420 (477)
++++|+|+|++++. ...++.+.+ .++||.|.||..|+...++|+|||++. +++++++++++|
T Consensus 295 ~p~~~~~~~~~~~~--------~~~~~~~~l-~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~~i~~~~~~l 356 (357)
T TIGR03539 295 HSEAGLYLWATRGE--------DAWDTVDRL-AELGILVAPGDFYGPAGSQHVRVALTA-TDERIAAAVARL 356 (357)
T ss_pred CCCccEEEEEECCC--------CHHHHHHHH-HhCCEEECCccccCCCCCCeEEEEecC-CHHHHHHHHHhh
Confidence 89999999999863 122455555 567999999998876567899999997 789999999887
No 83
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.5e-44 Score=365.17 Aligned_cols=346 Identities=25% Similarity=0.437 Sum_probs=276.4
Q ss_pred ccccccccccccc-cHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEE
Q 011801 38 GGVIQLGLAENQL-CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVM 116 (477)
Q Consensus 38 ~~~i~l~~~~n~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~ 116 (477)
..+|+|+.+.+.+ +++.+.+.+.+..... ......|++..|.+++|+++|+++++.++ +.+++++|++
T Consensus 33 ~~~~~l~~g~p~~~~~~~v~~a~~~~~~~~---------~~~~~~y~~~~g~~~lr~~ia~~l~~~~~--~~~~~~~i~~ 101 (394)
T PRK06836 33 DNVFDFSLGNPSVPPPAAVKEALRELAEEE---------DPGLHGYMPNAGYPEVREAIAESLNRRFG--TPLTADHIVM 101 (394)
T ss_pred CCeEEecCcCCCCCCCHHHHHHHHHHHhcC---------CcCcccCCCCCCCHHHHHHHHHHHHHHhC--CCCCcCcEEE
Confidence 3568888875444 3455555554421100 01245798889999999999999987766 4578999999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEE
Q 011801 117 GGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLI 196 (477)
Q Consensus 117 t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vi 196 (477)
|+|+++++..++..++++||.|++++|+|+.+...++.. |++++.++++++ +|.+|++++++++++ ++++|+
T Consensus 102 t~G~~~al~~~~~~l~~~gd~Vli~~p~~~~~~~~~~~~-g~~v~~v~~~~~-~~~~d~~~l~~~~~~------~~~~v~ 173 (394)
T PRK06836 102 TCGAAGALNVALKAILNPGDEVIVFAPYFVEYRFYVDNH-GGKLVVVPTDTD-TFQPDLDALEAAITP------KTKAVI 173 (394)
T ss_pred eCChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHc-CCEEEEEecCCc-cCcCCHHHHHhhcCc------CceEEE
Confidence 999999999999999999999999999999998888766 999999998753 588999999998854 789999
Q ss_pred EeCCCCCcccCCCHHHHHHHHHHHHh------cCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCccc
Q 011801 197 ITNPSNPLGTTLDRDTLKSLVSFIND------KNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDM 270 (477)
Q Consensus 197 i~nP~NPtG~~~~~~~l~~l~~~~~~------~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~ 270 (477)
+++|+||||.+++.+++++|+++|++ ||++||+||+|.++.|++....++.. ..+++++++||||.+
T Consensus 174 ~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~-------~~~~~i~~~S~SK~~ 246 (394)
T PRK06836 174 INSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFK-------YYDNSIVVYSFSKSL 246 (394)
T ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHH-------ccCcEEEEecchhhc
Confidence 99999999999999999999999999 89999999999998776544333322 246899999999999
Q ss_pred CCCCceEEEEEeCCHHHH-----HHHHHh---cccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 011801 271 GLPGFRVGIVYSFNDTVV-----NCGRKM---SSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQ 342 (477)
Q Consensus 271 g~~G~RvG~i~~~~~~i~-----~~~~~~---~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~ 342 (477)
|+||+|+||++++++... ...... ..+..++++.|.++..++.+.. .++.++++++.+.+.|++
T Consensus 247 ~~pGlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~--------~~~~~~~~r~~l~~~L~~ 318 (394)
T PRK06836 247 SLPGERIGYIAVNPEMEDADDLVAALVFANRILGFVNAPALMQRVVAKCLDATV--------DVSIYKRNRDLLYDGLTE 318 (394)
T ss_pred cCcceeeEEEecCHHHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCChH--------HHHHHHHHHHHHHHHHHh
Confidence 999999999999654321 111111 1223577889999999998742 135677888999999999
Q ss_pred CCCeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHH
Q 011801 343 VGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAA 422 (477)
Q Consensus 343 ~gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~ 422 (477)
.|+.+..+.+|+|+|++++.. ...++++.+ .++||.|.||+.|+. ++|+||+|+ .+++++++++++|++
T Consensus 319 ~g~~~~~~~gg~~~~~~~~~~-------~~~~~~~~l-~~~gv~v~~g~~f~~--~~~iRi~~~-~~~~~~~~~i~~l~~ 387 (394)
T PRK06836 319 LGFECVKPQGAFYLFPKSPEE-------DDVAFCEKA-KKHNLLLVPGSGFGC--PGYFRLSYC-VDTETIERSLPAFEK 387 (394)
T ss_pred CCCEeecCCceEEEEEeCCCC-------CHHHHHHHH-HhCCEEEECchhcCC--CCeEEEEec-CCHHHHHHHHHHHHH
Confidence 999988899999999988741 123566544 567999999999964 689999998 599999999999999
Q ss_pred HHhhhh
Q 011801 423 FVQQDK 428 (477)
Q Consensus 423 ~~~~~~ 428 (477)
++++|+
T Consensus 388 ~l~~~~ 393 (394)
T PRK06836 388 LAKEYK 393 (394)
T ss_pred HHHHhc
Confidence 998764
No 84
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=6.6e-44 Score=361.55 Aligned_cols=337 Identities=19% Similarity=0.247 Sum_probs=267.3
Q ss_pred ccccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEe
Q 011801 39 GVIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMG 117 (477)
Q Consensus 39 ~~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t 117 (477)
..|+|+.++|+++ ++.+.+.+++.-... ......|++ .|.++||++||+|+.+.+| +.+++++|++|
T Consensus 27 ~~i~l~~~~~~~~~~~~~~~al~~~l~~~---------~~~~~~Y~~-~g~~~lr~aia~~~~~~~~--~~~~~~~I~it 94 (368)
T PRK03317 27 VPVRLNTNENPYPPSPALVADIAEAVAEA---------AAGLNRYPD-RDAVALRADLAAYLTAQTG--VGLTVENVWAA 94 (368)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhh---------hhhhccCCC-CchHHHHHHHHHHhhhhcc--CCCChhhEEEC
Confidence 3599999999985 466777666531100 013457876 4889999999999988776 45789999999
Q ss_pred CChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEE
Q 011801 118 GGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLII 197 (477)
Q Consensus 118 ~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii 197 (477)
+|+++++..+++++++|||.|++++|+|+.|...++.. |.++++++.+ ++|.+|++++++++++. ++|+|++
T Consensus 95 ~G~~~~l~~~~~~~~~~gd~v~v~~P~y~~~~~~~~~~-g~~~~~~~~~--~~~~~d~~~l~~~~~~~-----~~~~i~l 166 (368)
T PRK03317 95 NGSNEILQQLLQAFGGPGRTALGFVPSYSMHPIIARGT-HTEWVEGPRA--ADFTLDVDAAVAAIAEH-----RPDVVFL 166 (368)
T ss_pred CCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHhc-CCeeEEcccC--CCCCCCHHHHHHHHhcc-----CCCEEEE
Confidence 99999999999999999999999999999999888766 9999888764 46889999999988642 6789999
Q ss_pred eCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceE
Q 011801 198 TNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRV 277 (477)
Q Consensus 198 ~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~Rv 277 (477)
+||+||||.+++.+++++|+++| +++||+||+|.++.+.+. .+...... ..+++++++||||.+|+||+|+
T Consensus 167 ~~p~NPtG~~~~~~~l~~l~~~~---~~~lI~DE~y~~~~~~~~--~~~~~~~~----~~~~~i~~~SfSK~~g~~GlRi 237 (368)
T PRK03317 167 TSPNNPTGTALPLDDVEAILDAA---PGIVVVDEAYAEFRRSGT--PSALTLLP----EYPRLVVSRTMSKAFAFAGGRL 237 (368)
T ss_pred eCCCCCCCCCCCHHHHHHHHHHC---CceEEEeCCchhhcccCC--cCHHHHHH----hCCCEEEEEechhhhccchhhh
Confidence 99999999999999999998876 689999999998655542 23333333 3358999999999999999999
Q ss_pred EEEEeCCHHHHHHHHHhcccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEE
Q 011801 278 GIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFW 357 (477)
Q Consensus 278 G~i~~~~~~i~~~~~~~~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~ 357 (477)
||++++++ +.+.+.+....+.+++++|.++..+|++.+. +.+..++++++++.+.+.|++.|+.+..+++++++|
T Consensus 238 G~~~~~~~-~~~~l~~~~~~~~~s~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 312 (368)
T PRK03317 238 GYLAAAPA-VVDALRLVRLPYHLSAVTQAAARAALRHADE----LLASVAALRAERDRVVAWLRELGLRVAPSDANFVLF 312 (368)
T ss_pred hhhhCCHH-HHHHHHhcCCCCCCCHHHHHHHHHHhhCHHH----HHHHHHHHHHHHHHHHHHHHHCCCEeCCCCCcEEEE
Confidence 99999554 5555554444445889999999999986432 334456678888999999999999888888988888
Q ss_pred eeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhh
Q 011801 358 MDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 358 ~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~ 426 (477)
.+++. ..++++.+. ++||.|.++. .++|+|++++ ++++++.+++.|+++++.
T Consensus 313 ~~~~~---------~~~~~~~l~-~~Gv~v~~~~-----~~~~iRi~~~--~~~~~~~~~~~l~~~~~~ 364 (368)
T PRK03317 313 GRFAD---------RHAVWQGLL-DRGVLIRDVG-----IPGWLRVTIG--TPEENDAFLAALAEVLAT 364 (368)
T ss_pred eccCC---------HHHHHHHHH-HCCEEEEeCC-----CCCeEEEecC--CHHHHHHHHHHHHHHHHH
Confidence 76541 124566655 5699998742 2679999998 678999999999998865
No 85
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-44 Score=363.91 Aligned_cols=322 Identities=18% Similarity=0.303 Sum_probs=258.5
Q ss_pred ccccccccccccccHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEe
Q 011801 38 GGVIQLGLAENQLCFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMG 117 (477)
Q Consensus 38 ~~~i~l~~~~n~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t 117 (477)
.+.|+|+.|||+++++.. +.. .....||+.. ..+|++++|++++ +++++|++|
T Consensus 28 ~~~~~l~~Nenp~~~~~~---~~~---------------~~~~~Yp~~~-~~~l~~~~a~~~g--------~~~~~I~~~ 80 (351)
T PRK01688 28 NGDVWLNANEYPTAVEFQ---LTQ---------------QTLNRYPECQ-PKAVIENYAAYAG--------VKPEQVLVS 80 (351)
T ss_pred CCceEecCCCCCCCCChh---hcc---------------cccccCCCCC-hHHHHHHHHHHhC--------CCHHHEEEc
Confidence 356999999999976431 111 2356798875 4899999999986 689999999
Q ss_pred CChHHHHHHHHHHhcCCC-CeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEE
Q 011801 118 GGATGANELIMFCLANPG-DAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLI 196 (477)
Q Consensus 118 ~G~t~al~~i~~~l~~~G-d~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vi 196 (477)
+|+++++.+++++++++| |.|++++|+|+.|...++.. |++++.++++. +|.+|++++++++. ++++|+
T Consensus 81 ~Gs~e~i~~~~~~~~~~g~~~vli~~P~y~~y~~~~~~~-G~~~~~v~~~~--~~~~d~~~l~~~~~-------~~~lv~ 150 (351)
T PRK01688 81 RGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETI-GVEIRTVPTLD--NWQLDLPAIADNLD-------GVKVVY 150 (351)
T ss_pred CCHHHHHHHHHHHhcCCCCCEEEEcCCCHHHHHHHHHHc-CCEEEEeecCC--CCCCCHHHHHHhcc-------CCcEEE
Confidence 999999999999999997 99999999999999888877 99999999863 58999999988762 688999
Q ss_pred EeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCce
Q 011801 197 ITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFR 276 (477)
Q Consensus 197 i~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~R 276 (477)
+||||||||++++.+++++|++.|++ +.+||+||+|.++. .. .+....+. ..+++++++||||.||+||+|
T Consensus 151 l~nPnNPTG~~~~~~~l~~l~~~~~~-~~~vivDEay~~f~--~~--~s~~~~~~----~~~n~iv~rSfSK~~glaGlR 221 (351)
T PRK01688 151 VCSPNNPTGNLINPQDLRTLLELTRG-KAIVVADEAYIEFC--PQ--ASLAGWLA----EYPHLVILRTLSKAFALAGLR 221 (351)
T ss_pred EeCCCCCCCCCCCHHHHHHHHHhCCC-CcEEEEECchhhcC--CC--CChHHHHh----hCCCEEEEecchHhhcCHHHH
Confidence 99999999999999999999999976 67899999998753 21 23334443 457899999999999999999
Q ss_pred EEEEEeCCHHHHHHHHHhcccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEecCCceEE
Q 011801 277 VGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLKSNAGLF 355 (477)
Q Consensus 277 vG~i~~~~~~i~~~~~~~~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~~~~g~~ 355 (477)
+||++++++ +.+.+++....+.++.++|.++..+|.+.. .+++++..+.++++++++.+.|+++ |+....+.+++|
T Consensus 222 iGy~i~~~~-~i~~l~~~~~~~~v~~~~~~~a~~~L~~~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps~~nf 298 (351)
T PRK01688 222 CGFTLANEE-VINLLLKVIAPYPLSTPVADIAAQALSPQG--IAAMRERVAEINANRQWLIAALKEIPCVEQVFDSETNY 298 (351)
T ss_pred HhHHhCCHH-HHHHHHhccCCCCCCHHHHHHHHHHHhcch--HHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcE
Confidence 999998554 555566665556688888988888888643 2346777788888999999999988 665344556789
Q ss_pred EEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHH
Q 011801 356 FWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIA 421 (477)
Q Consensus 356 ~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~ 421 (477)
+|++++. ..++.+.++ ++||.|+++..|. ..++|+||+++ ++++++.+++.|+
T Consensus 299 i~~~~~~---------~~~l~~~L~-~~gi~vr~~~~~~-~~~~~iRis~~--~~~e~~~l~~al~ 351 (351)
T PRK01688 299 ILARFTA---------SSAVFKSLW-DQGIILRDQNKQP-GLSNCLRITIG--TREECQRVIDALR 351 (351)
T ss_pred EEEEcCC---------HHHHHHHHH-HCCeEEEECCCcC-CCCCeEEEeCC--CHHHHHHHHHhhC
Confidence 9998862 124666666 5699999887663 23679999999 6899999998873
No 86
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=6.1e-44 Score=360.23 Aligned_cols=329 Identities=18% Similarity=0.253 Sum_probs=262.9
Q ss_pred Ccccccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCC-CcE
Q 011801 37 PGGVIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDP-DRI 114 (477)
Q Consensus 37 ~~~~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~-~~i 114 (477)
+.++|+|+.++|+++ ++.+.+.+.+.-.. ..+..|++ .|.++||+++|++++ +++ ++|
T Consensus 25 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~Y~~-~~~~~lr~~ia~~~~--------~~~~~~I 84 (356)
T PRK04870 25 ATGMVKLDAMENPYRLPAELRAELGERLAE-----------VALNRYPD-PRAAALKAALRAAMG--------VPAGADV 84 (356)
T ss_pred CCCceeCcCCCCCCCCCHHHHHHHHHHhhc-----------cccccCCC-CCHHHHHHHHHHHhC--------cCCCCcE
Confidence 467999999999985 45666666553110 13467887 578999999999996 233 589
Q ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeE
Q 011801 115 VMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKG 194 (477)
Q Consensus 115 ~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~ 194 (477)
++|+|+++++..++.+++++||+|++++|+|+.|...++.. |++++++++++ +|.+|++++++++.+. ++++
T Consensus 85 ~~t~G~~~~i~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~-g~~~~~i~~~~--~~~~d~~~l~~~~~~~-----~~~~ 156 (356)
T PRK04870 85 LLGNGSDELIQLLALACAKPGATVLAPEPGFVMYRMSAKLA-GLEFVGVPLTA--DFTLDLPAMLAAIAEH-----RPAL 156 (356)
T ss_pred EEcCCHHHHHHHHHHHhcCCCCEEEECCCCHHHHHHHHHHc-CCEEEEecCCC--CCCCCHHHHHHHhhcC-----CCCE
Confidence 99999999999999999999999999999999999888877 99999999863 5889999999988642 7899
Q ss_pred EEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCC
Q 011801 195 LIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPG 274 (477)
Q Consensus 195 vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G 274 (477)
|+++|||||||.+++.+++++|+++| ++++|+||+|.++.+ ..+.+ .+. ..+++++++|||| +|+||
T Consensus 157 v~l~~p~NPtG~~~~~~~~~~i~~~~---~~~ii~De~y~~~~~--~~~~~---~~~----~~~~vi~~~S~SK-~~~~G 223 (356)
T PRK04870 157 VFLAYPNNPTGNLFDDADVERIIEAA---PGLVVVDEAYQPFAG--DSWLP---RLA----RFPNLLVMRTVSK-LGLAG 223 (356)
T ss_pred EEEcCCCCCCCCCCCHHHHHHHHHHC---CCEEEEECCchhhcC--cchHH---HHh----hCCCEEEEecchh-hhhHH
Confidence 99999999999999999999999988 678999999987533 22211 122 3468999999999 89999
Q ss_pred ceEEEEEeCCHHHHHHHHHhcccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEecCCce
Q 011801 275 FRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLKSNAG 353 (477)
Q Consensus 275 ~RvG~i~~~~~~i~~~~~~~~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~~~~g 353 (477)
+|+||++++++ +.+.+.+....+.++.++|.++..++++.++ +++.+++++++++.+.+.|+++ |+.+.+ .+|
T Consensus 224 lRiG~~i~~~~-~i~~~~~~~~~~~~~~~~q~~a~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~ 297 (356)
T PRK04870 224 LRLGYLAGHPA-WIAELDKVRPPYNVNVLTQATALFALEHVDV----LDAQAAQLRAERTRLAAALAALPGVTVFP-SAA 297 (356)
T ss_pred HhhhhhhCCHH-HHHHHHHccCCCcCCHHHHHHHHHHHhCHHH----HHHHHHHHHHHHHHHHHHHHhCCCcEECC-CCC
Confidence 99999999655 4444554444556888999998888876443 5667778889999999999987 887654 556
Q ss_pred EEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHH
Q 011801 354 LFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFV 424 (477)
Q Consensus 354 ~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~ 424 (477)
+|+|++++. ..++++. +.++||.|+||+.|+...++++||+++ +.+++++++++|++++
T Consensus 298 ~~~~~~~~~---------~~~~~~~-l~~~gI~v~~~~~f~~~~~~~iRis~~--~~~~~~~l~~al~~~~ 356 (356)
T PRK04870 298 NFILVRVPD---------AAAVFDG-LKTRGVLVKNLSGMHPLLANCLRVTVG--TPEENAQFLAALKAAL 356 (356)
T ss_pred eEEEEECCC---------HHHHHHH-HHHCCEEEEECCCCCCCCCCeEEEeCC--CHHHHHHHHHHHHHhC
Confidence 799999872 1135544 467799999999997656789999999 6888999999998753
No 87
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=6.5e-44 Score=361.39 Aligned_cols=332 Identities=20% Similarity=0.261 Sum_probs=263.7
Q ss_pred cccccccccccccH-HHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEe
Q 011801 39 GVIQLGLAENQLCF-DLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMG 117 (477)
Q Consensus 39 ~~i~l~~~~n~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t 117 (477)
.+|+|++|+|.+++ +.+.+.+.+.. .....|++. +.++||++||++++ +++++|++|
T Consensus 33 ~~~~l~~~~~~~~~~~~~~~a~~~~~-------------~~~~~Y~~~-~~~~Lr~~ia~~~~--------~~~~~I~it 90 (369)
T PRK08153 33 FRARIGANESGFGPSPSVIAAMREAA-------------AEIWKYGDP-ENHDLRHALAAHHG--------VAPENIMVG 90 (369)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHH-------------HHhhcCCCC-ccHHHHHHHHHHhC--------CCHHHEEEc
Confidence 45799999999854 55666665531 123568876 47999999999985 678999999
Q ss_pred CChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEE
Q 011801 118 GGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLII 197 (477)
Q Consensus 118 ~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii 197 (477)
+|+++++..++.++++|||.|+++.|+|+.|...+... |.++++++++.+ .+|++++++.+.+. ++++|++
T Consensus 91 ~G~~~~l~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~-g~~~~~vp~~~~---~~~~~~l~~~~~~~-----~~~~i~l 161 (369)
T PRK08153 91 EGIDGLLGLIVRLYVEPGDPVVTSLGAYPTFNYHVAGF-GGRLVTVPYRDD---REDLDALLDAARRE-----NAPLVYL 161 (369)
T ss_pred CCHHHHHHHHHHHhcCCCCEEEECCCcchHHHHHHHHc-CCeEEEeeCCCC---CCCHHHHHHHhccc-----CCcEEEE
Confidence 99999999999999999999999999999999888876 999999998532 47888887766432 7889999
Q ss_pred eCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceE
Q 011801 198 TNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRV 277 (477)
Q Consensus 198 ~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~Rv 277 (477)
+|||||||++++.+++++|++.|+ ++++||+||+|.++.+++. +.++. . ..+++++++||||.+|+||+|+
T Consensus 162 ~~P~NPtG~~~~~~~l~~l~~~~~-~~~~lI~DE~y~~~~~~~~-~~~~~---~----~~~~~i~~~SfSK~~g~~GlRi 232 (369)
T PRK08153 162 ANPDNPMGSWHPAADIVAFIEALP-ETTLLVLDEAYCETAPAGA-APPID---T----DDPNVIRMRTFSKAYGLAGARV 232 (369)
T ss_pred eCCCCCCCCCCCHHHHHHHHHhCC-CCcEEEEeCchhhhcCccc-chhhh---h----cCCCEEEEecchHhccCcchhe
Confidence 999999999999999999999887 4999999999998765432 22222 1 3468999999999999999999
Q ss_pred EEEEeCCHHHHHHHHHhcccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEE
Q 011801 278 GIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFW 357 (477)
Q Consensus 278 G~i~~~~~~i~~~~~~~~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~ 357 (477)
||++++++ +.+.+.+....+.+++++|.++..+|.++++ +++.++.++++++.+.+.|++.|+.+. +.+|+|+|
T Consensus 233 G~~v~~~~-~~~~l~~~~~~~~~s~~~q~~~~~~l~~~~~----~~~~~~~~~~~r~~~~~~L~~~g~~~~-p~~~~f~~ 306 (369)
T PRK08153 233 GYAIGAPG-TIKAFDKVRNHFGMNRIAQAAALAALKDQAY----LAEVVGKIAAARDRIAAIARANGLTPL-PSATNFVA 306 (369)
T ss_pred eeeecCHH-HHHHHHHhhcCCCCCHHHHHHHHHHhcCHHH----HHHHHHHHHHHHHHHHHHHHHCCCccC-CCcCcEEE
Confidence 99999655 4444444444456899999999999987554 667788889999999999998898755 56779999
Q ss_pred eeccchhhccCchHHHHHHHHHHHhcCeEEe-CCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhhh
Q 011801 358 MDLRHLLKEKTLEGEIALWRTIVNDVKLNVS-PGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQQD 427 (477)
Q Consensus 358 ~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~-pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~~ 427 (477)
++++.. . ....++++.+++ +||.++ ||.. ..++++|++++ ++++++.+++.|++++.+.
T Consensus 307 ~~~~~~---~--~~a~~l~~~l~~-~Gi~v~~p~~~---~~~~~iRis~~--~~~~~~~~~~al~~~~~~~ 366 (369)
T PRK08153 307 IDCGRD---G--AFARAVLDGLIA-RDIFVRMPGVA---PLDRCIRVSCG--PDEELDLFAEALPEALEAA 366 (369)
T ss_pred EECCCC---c--ccHHHHHHHHHH-CCeEEeeCCCC---CCCCeEEEecC--CHHHHHHHHHHHHHHHHHh
Confidence 998631 1 112256677665 599995 6642 23579999998 6899999999999998653
No 88
>PRK07908 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-43 Score=357.40 Aligned_cols=324 Identities=21% Similarity=0.290 Sum_probs=257.7
Q ss_pred cccccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEE
Q 011801 38 GGVIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVM 116 (477)
Q Consensus 38 ~~~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~ 116 (477)
.++|||++++|+++ ++.+.+.+.+.. .+...|++..|.+++|+++|++++ +++++|++
T Consensus 22 ~~~~~l~~~~~~~~~~~~~~~~~~~~~-------------~~~~~Y~~~~g~~~lr~aia~~~~--------~~~~~I~i 80 (349)
T PRK07908 22 PGLLDFAVNVRHDTPPEWLRERLAARL-------------GDLAAYPSTEDERRARAAVAARHG--------RTPDEVLL 80 (349)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHh-------------hHhhcCCCccchHHHHHHHHHHhC--------cChhhEEE
Confidence 47899999999885 466777776631 234679988899999999999985 57999999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEE
Q 011801 117 GGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLI 196 (477)
Q Consensus 117 t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vi 196 (477)
|+|+++++.+++. + .+| .++++.|+|..+...++.. |+++++++++. +|.+|+++++ + ++++++
T Consensus 81 t~Ga~~al~~~~~-l-~~~-~viv~~P~y~~~~~~~~~~-G~~i~~v~~~~--~~~~d~~~l~----~------~~~~i~ 144 (349)
T PRK07908 81 LAGAAEGFALLAR-L-RPR-RAAVVHPSFTEPEAALRAA-GIPVHRVVLDP--PFRLDPAAVP----D------DADLVV 144 (349)
T ss_pred CCCHHHHHHHHHh-c-CCC-eEEEeCCCChHHHHHHHHc-CCEEEeeccCc--ccCcChhHhc----c------CCCEEE
Confidence 9999999999988 4 665 5778899999998888776 99999999874 3788887552 1 678999
Q ss_pred EeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCce
Q 011801 197 ITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFR 276 (477)
Q Consensus 197 i~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~R 276 (477)
++|||||||.+++.+++.++ |+ ++.++|+||+|++++.. . ..++... ..+++++++||||.||+||+|
T Consensus 145 l~np~NPTG~~~~~~~l~~l---~~-~~~~iIvDe~y~~~~~~-~-~~~l~~~------~~~~~i~i~S~SK~~~l~GlR 212 (349)
T PRK07908 145 IGNPTNPTSVLHPAEQLLAL---RR-PGRILVVDEAFADAVPG-E-PESLAGD------DLPGVLVLRSLTKTWSLAGLR 212 (349)
T ss_pred EcCCCCCCCCCcCHHHHHHH---Hh-cCCEEEEECcchhhccC-C-ccccccc------cCCCEEEEeecccccCCccce
Confidence 99999999999997766554 54 57788899999986432 2 2343332 346799999999999999999
Q ss_pred EEEEEeCCHHHHHHHHHhcccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEE
Q 011801 277 VGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFF 356 (477)
Q Consensus 277 vG~i~~~~~~i~~~~~~~~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~ 356 (477)
+||++++++ +.+.+.+....+.++++.|.++..++.+.. ..++++.+++++++++.+.+.|++.|+++.++.+|+|+
T Consensus 213 iG~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g~~~ 289 (349)
T PRK07908 213 VGYALGAPD-VLARLTRGRAHWPVGTLQLEAIAACCAPRA--VAEAAADAARLAADRAEMVAGLRAVGARVVDPAAAPFV 289 (349)
T ss_pred eeeeecCHH-HHHHHHhcCCCCCccHHHHHHHHHHhcccc--hHHHHHHHHHHHHHHHHHHHHHHhCCcEeccCCCceEE
Confidence 999998655 444454444455678888888888887432 35677888999999999999999889888888889999
Q ss_pred EeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHh
Q 011801 357 WMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQ 425 (477)
Q Consensus 357 ~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~ 425 (477)
|++++.. +.+...++++||.|.||+.|...++++||||++ ++++++++++.|++++.
T Consensus 290 ~~~~~~~----------~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~~--~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 290 LVRVPDA----------ELLRKRLRERGIAVRRGDTFPGLDPDYLRLAVR--PRAEVPVLVQALAEILK 346 (349)
T ss_pred EEECCcH----------HHHHHHHHhCCEEEEECCCCCCCCCCeEEEEeC--CCccHHHHHHHHHHHHh
Confidence 9999841 233445567799999999996556789999997 67899999999998865
No 89
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=2.4e-43 Score=356.97 Aligned_cols=325 Identities=19% Similarity=0.262 Sum_probs=259.5
Q ss_pred cccccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEE
Q 011801 38 GGVIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVM 116 (477)
Q Consensus 38 ~~~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~ 116 (477)
.++|+|+.++|+++ ++.+.+.+.+.. .....|++. +.++||++||++++ +++++|++
T Consensus 43 ~~~i~l~~~~~~~~~~~~~~~a~~~~~-------------~~~~~Y~~~-~~~~Lr~aia~~~~--------v~~e~I~i 100 (370)
T PRK09105 43 EGAVFLNANECPLGPSPAARDAAARSA-------------ALSGRYDLE-LEDDLRTLFAAQEG--------LPADHVMA 100 (370)
T ss_pred CCcEEecCCCCCCCCCHHHHHHHHHHH-------------HHhcCCCCc-hHHHHHHHHHHHhC--------cChhhEEE
Confidence 57899999999885 566666655421 123468765 48999999999875 67999999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEE
Q 011801 117 GGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLI 196 (477)
Q Consensus 117 t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vi 196 (477)
|+|+++++..++.+++++||.|++++|+|+.|...++.. |++++.++++. +|.+|++++++.. .++++|+
T Consensus 101 t~Gs~~ai~~~~~~l~~~gd~Vli~~P~y~~~~~~~~~~-g~~~~~v~~~~--~~~~d~~~l~~~~-------~~~~~v~ 170 (370)
T PRK09105 101 YAGSSEPLNYAVLAFTSPTAGLVTADPTYEAGWRAADAQ-GAPVAKVPLRA--DGAHDVKAMLAAD-------PNAGLIY 170 (370)
T ss_pred cCChHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHc-CCeEEEecCCC--CCCCCHHHHHhcC-------CCCCEEE
Confidence 999999999999999999999999999999998888877 99999999864 5788999887652 2678999
Q ss_pred EeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCce
Q 011801 197 ITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFR 276 (477)
Q Consensus 197 i~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~R 276 (477)
+||||||||.+++.++++++++.++ ++++||+||+|.++ ... .+...+.+ ..+++++++||||.||++|+|
T Consensus 171 l~nP~NPTG~~~~~~~l~~l~~~~~-~~~~lIvDEaY~~f--~~~--~s~~~~~~----~~~~vi~~~SfSK~~g~~GlR 241 (370)
T PRK09105 171 ICNPNNPTGTVTPRADIEWLLANKP-AGSVLLVDEAYIHF--SDA--PSVVDLVA----QRKDLIVLRTFSKLYGMAGMR 241 (370)
T ss_pred EeCCCCCCCcCcCHHHHHHHHHhCC-CCcEEEEECchHHh--ccC--cchHHHHh----hCCCEEEEecccHhhcCCccc
Confidence 9999999999999999999999754 59999999999764 322 24344433 357899999999999999999
Q ss_pred EEEEEeCCHHHHHHHHHhcccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEE
Q 011801 277 VGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFF 356 (477)
Q Consensus 277 vG~i~~~~~~i~~~~~~~~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~ 356 (477)
+||++++++ +.+.+... ..+.++.+.|.++...|.+.+ ++++.++.++++++.+.+.|++.|+++.++++++|
T Consensus 242 iG~~v~~~~-~i~~l~~~-~~~~~~~~~~~aa~~~L~~~~----~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~~~f~- 314 (370)
T PRK09105 242 LGLAAARPD-LLAKLARF-GHNPLPVPAAAAGLASLRDPK----LVPQRRAENAAVREDTIAWLKKKGYKCTPSQANCF- 314 (370)
T ss_pred eeeeecCHH-HHHHHHhc-CCCCcCHHHHHHHHHHHhCHH----HHHHHHHHHHHHHHHHHHHHHHCCCCcCCCCCcEE-
Confidence 999999655 44444444 344578888999888888754 46777788999999999999999998888887755
Q ss_pred EeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHH
Q 011801 357 WMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFV 424 (477)
Q Consensus 357 ~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~ 424 (477)
|++++. +..++++.++++ ||.| |..|. ..++|+||+++ ++++++.+++.|++++
T Consensus 315 ~~~~~~--------~~~~l~~~L~~~-gI~v--~~~~~-~~~~~~Ris~~--~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 315 MVDVKR--------PAKAVADAMAKQ-GVFI--GRSWP-IWPNWVRVTVG--SEEEMAAFRSAFAKVM 368 (370)
T ss_pred EEeCCC--------CHHHHHHHHHHC-CcEE--ecCCC-CCCCeEEEEcC--CHHHHHHHHHHHHHHh
Confidence 677752 123677887765 9998 44453 34789999998 6788999999998876
No 90
>PLN02397 aspartate transaminase
Probab=100.00 E-value=4.7e-43 Score=360.63 Aligned_cols=315 Identities=18% Similarity=0.265 Sum_probs=245.7
Q ss_pred ccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcE-----EEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHh
Q 011801 79 IAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRI-----VMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLS 153 (477)
Q Consensus 79 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i-----~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~ 153 (477)
...|++..|.++||+++++|+.+..+ ...++++| +.++|+.+ +...+..++.|||+|++++|+|+.|...++
T Consensus 84 ~~~Y~~~~G~~~LR~aia~~~~~~~~--~~~~~~~i~~~~i~~g~Ga~~-l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~ 160 (423)
T PLN02397 84 NKEYLPIEGLAEFNKLSAKLAYGADS--PAIKENRVATVQCLSGTGSLR-LGAEFLARFYPGSTIYIPNPTWGNHHNIFR 160 (423)
T ss_pred CCCCCCcCCCHHHHHHHHHHHcCCCC--chhhcCeeEeeecccchHHHH-HHHHHHHHhCCCCEEEEeCCCchhHHHHHH
Confidence 45799999999999999999965432 12223343 23333332 333444455799999999999999999998
Q ss_pred hhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccc
Q 011801 154 WRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIY 233 (477)
Q Consensus 154 ~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y 233 (477)
.. |++++++++...++|++|++.+++.+++. ..+++++++++||||||.+++.+++++|+++|++++++||+||+|
T Consensus 161 ~~-g~~~~~v~l~~~~~~~~d~~~l~~~l~~~---~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y 236 (423)
T PLN02397 161 DA-GVPVRTYRYYDPKTRGLDFDGLLEDLKAA---PDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAY 236 (423)
T ss_pred Hc-CCeEEEeecccCcCCccCHHHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccc
Confidence 77 99999999844446899999998887643 236788889999999999999999999999999999999999999
Q ss_pred cccccCC--CCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEE--eCCHHHH----HHHHHhc--ccCCCchH
Q 011801 234 AATVFSS--PKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVY--SFNDTVV----NCGRKMS--SFGLVSSQ 303 (477)
Q Consensus 234 ~~~~~~~--~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~--~~~~~i~----~~~~~~~--~~~~vs~~ 303 (477)
.++.|++ ..+.++..... ..+++++++||||.|+++|+|+||++ +.+..+. ..+.+.. .+..++.+
T Consensus 237 ~~l~~~~~~~~~~~~~~~~~----~~~~vI~~~SfSK~~~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (423)
T PLN02397 237 QGFASGDLDADAQSVRMFVE----DGHEILVAQSYAKNMGLYGERVGALSVVCKSADVAVRVKSQLKLIARPMYSNPPIH 312 (423)
T ss_pred CCccCCchhhhhHHHHHHHh----cCCcEEEEEECcccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHH
Confidence 9988754 23344444332 23579999999999999999999985 4443322 2222222 23346778
Q ss_pred HHHHHHHhcCChhhHHHH---HHHHHHHHHHHHHHHHHHHhhCC----CeEecCCceEEEEeeccchhhccCchHHHHHH
Q 011801 304 TQYLLASMLSDDEFVDNF---LVETSKRLAKRHHNFTKGLEQVG----INCLKSNAGLFFWMDLRHLLKEKTLEGEIALW 376 (477)
Q Consensus 304 ~q~~~~~~L~~~~~~~~~---~~~~~~~l~~r~~~l~~~L~~~g----i~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~ 376 (477)
.|.+++.+|+++++.+.+ +++.++++++|++.+.+.|+++| +.+..+++|+|+|++++. +++
T Consensus 313 ~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~fl~~~l~~-----------~~~ 381 (423)
T PLN02397 313 GASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEARGSPGDWSHITKQIGMFSFTGLNK-----------EQV 381 (423)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccCCceEEEecCCCH-----------HHH
Confidence 999999999987543344 67788999999999999999987 788889999999998851 478
Q ss_pred HHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHh
Q 011801 377 RTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQ 425 (477)
Q Consensus 377 ~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~ 425 (477)
..|++++||.|.++ + |++|++.+++.+++++++|+++++
T Consensus 382 ~~Ll~~~~V~v~~~--------~--Ri~~~~~~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 382 DRMTKEYHIYMTRD--------G--RISMAGLSSKNVPYLADAIHAVVT 420 (423)
T ss_pred HHHHHhCCEEECCC--------C--eEEEeeCCHHHHHHHHHHHHHHHh
Confidence 88999999999632 2 999987899999999999999986
No 91
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=3.1e-43 Score=356.59 Aligned_cols=334 Identities=22% Similarity=0.324 Sum_probs=268.4
Q ss_pred CccccccccccccccH-HHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEE
Q 011801 37 PGGVIQLGLAENQLCF-DLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIV 115 (477)
Q Consensus 37 ~~~~i~l~~~~n~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~ 115 (477)
+.++|+|+.++|++++ +.+.+.+.+.. .....|++..+ .++|+++|++++ +++++|+
T Consensus 31 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~-------------~~~~~y~~~~~-~~lr~~ia~~~~--------~~~~~i~ 88 (367)
T PRK02731 31 IADIIKLASNENPLGPSPKAIEAIRAAA-------------DELHRYPDGSG-FELKAALAEKFG--------VDPERII 88 (367)
T ss_pred CCceEEecCCCCCCCCCHHHHHHHHHHH-------------HhhcCCCCCcH-HHHHHHHHHHhC--------cCHHHEE
Confidence 5678999999998853 45555555531 23457887654 799999999985 5789999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEE
Q 011801 116 MGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGL 195 (477)
Q Consensus 116 ~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~v 195 (477)
+|+|+++++.+++.+++++||.|++++|+|..+...+... |+++++++++ ++.+|++++++++.+ ++++|
T Consensus 89 ~t~G~~~~l~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~-g~~~~~~~~~---~~~~~~~~l~~~~~~------~~~~v 158 (367)
T PRK02731 89 LGNGSDEILELLARAYLGPGDEVIYSEHGFAVYPIAAQAV-GAKPVEVPAK---DYGHDLDAMLAAVTP------RTRLV 158 (367)
T ss_pred EcCCHHHHHHHHHHHhcCCCCEEEEecCCHHHHHHHHHHc-CCeEEEeccc---CCCCCHHHHHHHhCC------CCcEE
Confidence 9999999999999999999999999999999888777665 9999999873 578999999988753 78999
Q ss_pred EEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCc
Q 011801 196 IITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGF 275 (477)
Q Consensus 196 ii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~ 275 (477)
+++|||||||.+++.++++++++.|+ +|+++|+||+|.++.+.+....++ ...+ ..+++++++||||.||++|+
T Consensus 159 ~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~y~~~~~~~~~~~~~-~~~~----~~~~~i~~~S~SK~~g~~G~ 232 (367)
T PRK02731 159 FIANPNNPTGTYLPAEEVERFLAGVP-PDVLVVLDEAYAEYVRRKDYEDGL-ELVA----KFPNVVVTRTFSKAYGLAGL 232 (367)
T ss_pred EEeCCCCCCCcCCCHHHHHHHHHhCC-CCcEEEEECcHHHhccCcCcccHH-HHHh----hcCCEEEEeeehHhhcCccc
Confidence 99999999999999999999999875 699999999999876655433333 2332 34679999999999999999
Q ss_pred eEEEEEeCCHHHHHHHHHhcccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEE
Q 011801 276 RVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLF 355 (477)
Q Consensus 276 RvG~i~~~~~~i~~~~~~~~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~ 355 (477)
|+||++++++ +.+.+.+....+.+++++|.++..+|++.++ +++.++.++++++.+.+.|++.|+.+.+ .+|+|
T Consensus 233 RiG~l~~~~~-~~~~l~~~~~~~~~~~~~~~~a~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~g~~ 306 (367)
T PRK02731 233 RVGYGIAPPE-IIDALNRVRQPFNVNSLALAAAVAALDDDAF----VEKSRALNAEGMAWLTEFLAELGLEYIP-SVGNF 306 (367)
T ss_pred ceeeeeCCHH-HHHHHHHccCCCCCCHHHHHHHHHHhCCHHH----HHHHHHHHHHHHHHHHHHHHHCCCccCC-CCceE
Confidence 9999999654 4455555444455788999999999987544 5677778888999999999999988764 45689
Q ss_pred EEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHh
Q 011801 356 FWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQ 425 (477)
Q Consensus 356 ~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~ 425 (477)
+|++++...+ ..++++.+. ++||.|+||..|+ .++++|++++ +.++++.+++.|+++++
T Consensus 307 ~~i~~~~~~~------~~~~~~~L~-~~gI~v~~~~~~~--~~~~iRis~~--~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 307 ILVDFDDGKD------AAEAYQALL-KRGVIVRPVAGYG--LPNALRITIG--TEEENRRFLAALKEFLA 365 (367)
T ss_pred EEEECCCCCC------HHHHHHHHH-HCCEEEEeCCCCC--CCCeEEEecC--CHHHHHHHHHHHHHHHh
Confidence 9999864222 225666665 5699999998885 3679999998 67899999999999875
No 92
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.9e-43 Score=353.26 Aligned_cols=325 Identities=18% Similarity=0.304 Sum_probs=256.5
Q ss_pred cccccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEE
Q 011801 38 GGVIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVM 116 (477)
Q Consensus 38 ~~~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~ 116 (477)
.++|+|+.++|+++ ++.+.+.+.+.-. .....|++. |.++||++||++++ +++++|++
T Consensus 24 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~------------~~~~~y~~~-~~~~lr~aia~~~~--------~~~~~I~i 82 (353)
T PRK05387 24 AKLIKLNTNENPYPPSPKVLEAIRAALG------------DDLRLYPDP-NADALRQAIAAYYG--------LDPEQVFV 82 (353)
T ss_pred cceeeccCCCCCCCCCHHHHHHHHHHhh------------hhhhcCCCC-cHHHHHHHHHHHhC--------CCHHHEEE
Confidence 46899999999985 5667776665311 124578766 56999999999985 67899999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEE
Q 011801 117 GGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLI 196 (477)
Q Consensus 117 t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vi 196 (477)
|+|+++++.+++++++++||.|++++|+|+.|...++.. |++++++++++ +|.+|++++++ +.++|+
T Consensus 83 t~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~-g~~~~~v~~~~--~~~~d~~~l~~----------~~~~v~ 149 (353)
T PRK05387 83 GNGSDEVLAHAFLAFFNHDRPLLFPDITYSFYPVYAGLY-GIPYEEIPLDD--DFSIDVEDYLR----------PNGGII 149 (353)
T ss_pred cCCHHHHHHHHHHHhcCCCCEEEEeCCCHHHHHHHHHHc-CCEEEEeecCC--CCCCCHHHHHh----------cCCEEE
Confidence 999999999999999999999999999999888877776 99999999863 57899998863 356899
Q ss_pred EeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCce
Q 011801 197 ITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFR 276 (477)
Q Consensus 197 i~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~R 276 (477)
++|||||||.+++.+++++|+++++ ++++|+||+|.+ |.+....+ ... ..+++++++||||.+|+||+|
T Consensus 150 ~~~P~NPtG~~~~~~~~~~l~~~~~--~~~livDe~y~~--~~~~~~~~---~~~----~~~~~i~~~S~SK~~~~~GlR 218 (353)
T PRK05387 150 FPNPNAPTGIALPLAEIERILAANP--DSVVVIDEAYVD--FGGESAIP---LID----RYPNLLVVQTFSKSRSLAGLR 218 (353)
T ss_pred EeCCCCCCCCCCCHHHHHHHHHhCC--CcEEEEeCcccc--cCCcchHH---HHh----hCCCEEEEEehhHhhcchhhh
Confidence 9999999999999999999998653 899999999986 44332222 222 346799999999999999999
Q ss_pred EEEEEeCCHHHHHHHHHhc-c--cCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCce
Q 011801 277 VGIVYSFNDTVVNCGRKMS-S--FGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAG 353 (477)
Q Consensus 277 vG~i~~~~~~i~~~~~~~~-~--~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g 353 (477)
+||++++++ +.+.+++.. . .+.++.++|.++..+|.+.++ +++.++++.++++.+.+.|++.|+.+.+ .+|
T Consensus 219 ~G~~~~~~~-~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~ 292 (353)
T PRK05387 219 VGFAIGHPE-LIEALNRVKNSFNSYPLDRLAQAGAIAAIEDEAY----FEETRAKVIATRERLVEELEALGFEVLP-SKA 292 (353)
T ss_pred ceeeecCHH-HHHHHHHhhccCCCCCcCHHHHHHHHHHhcCHHH----HHHHHHHHHHHHHHHHHHHHHCCCeECC-CcC
Confidence 999998654 444444433 2 234788999999999987554 5667788899999999999999987654 566
Q ss_pred EEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHh
Q 011801 354 LFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQ 425 (477)
Q Consensus 354 ~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~ 425 (477)
+|+|++++.. +..++++.+. ++||.|++... ...++++||+++ ++++++.++++|++++.
T Consensus 293 ~~~~~~~~~~-------~~~~~~~~l~-~~gi~v~~~~~--~~~~~~iRis~~--~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 293 NFVFARHPSH-------DAAELAAKLR-ERGIIVRHFNK--PRIDQFLRITIG--TDEEMEALVDALKEILA 352 (353)
T ss_pred cEEEEECCCC-------CHHHHHHHHH-HCCEEEEECCC--CCCCCeEEEEeC--CHHHHHHHHHHHHHHhh
Confidence 8999998731 1235677665 56999975322 124679999998 67999999999998864
No 93
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-42 Score=353.71 Aligned_cols=347 Identities=20% Similarity=0.318 Sum_probs=269.7
Q ss_pred CCcccccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcE
Q 011801 36 NPGGVIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRI 114 (477)
Q Consensus 36 ~~~~~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i 114 (477)
++.++|+|+.++|+++ ++.+.+.+.+.... .....|++..|.+++|+++|++++ +++++|
T Consensus 26 ~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~-----------~~~~~y~~~~g~~~lr~~ia~~l~--------~~~~~v 86 (380)
T PRK06225 26 KDKEMIWMGQNTNHLGPHEEVREAMIRCIEE-----------GEYCKYPPPEGFPELRELILKDLG--------LDDDEA 86 (380)
T ss_pred hcCCeEEccCCCCCCCCCHHHHHHHHHHHhc-----------CCCCCCCCCcchHHHHHHHHHhcC--------CCCCcE
Confidence 3567899999999885 45555555443110 123568888899999999999985 578899
Q ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEecc-CCCCcccCHHHHHHHHHHHHHhCCCee
Q 011801 115 VMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCD-ISNNFKITREALEAAYERAQEASINIK 193 (477)
Q Consensus 115 ~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~-~~~~f~i~~~~l~~~~~~~~~~~~~~k 193 (477)
++|+|+++++..++++++.+||.|++++|+|..+...++.. |.++++++++ ..++|.+|++++++++.. +++
T Consensus 87 ~~~~g~t~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~~d~~~l~~~~~~------~~~ 159 (380)
T PRK06225 87 LITAGATESLYLVMRAFLSPGDNAVTPDPGYLIIDNFASRF-GAEVIEVPIYSEECNYKLTPELVKENMDE------NTR 159 (380)
T ss_pred EEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHHh-CceEEeeccccccCCccCCHHHHHhhcCC------Cce
Confidence 99999999999999999999999999999999888777766 9999999975 345689999999988753 788
Q ss_pred EEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCC
Q 011801 194 GLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLP 273 (477)
Q Consensus 194 ~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~ 273 (477)
+|+++||+||||.+++.+++++|+++|+++|+++|+||+|.++.... .+...+ .+++++++.||||.+|++
T Consensus 160 ~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~---~~~~~~------~~~~~i~~~s~SK~~g~~ 230 (380)
T PRK06225 160 LIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREH---TLAAEY------APEHTVTSYSFSKIFGMA 230 (380)
T ss_pred EEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccC---Cchhhc------CCCCEEEEeechhhcCCc
Confidence 99999999999999999999999999999999999999998653221 222222 347889999999999999
Q ss_pred CceEEEEEeCCHHHHHHHHHh-cccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeE-ecC
Q 011801 274 GFRVGIVYSFNDTVVNCGRKM-SSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINC-LKS 350 (477)
Q Consensus 274 G~RvG~i~~~~~~i~~~~~~~-~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~-~~~ 350 (477)
|+|+||++++++ +.+.++.. ......+.++|.++..+|... .+++++.++.++++++.+.+.|+++ |+.+ ..+
T Consensus 231 G~RiG~i~~~~~-l~~~~~~~~~~~~~~~~~~~~~a~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 306 (380)
T PRK06225 231 GLRIGAVVATPD-LIEVVKSIVINDLGTNVIAQEAAIAGLKVK---DEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYP 306 (380)
T ss_pred cceeEEEecCHH-HHHHHHHHHhcccCCCHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCC
Confidence 999999999655 44444433 223346788999888888653 2345666667777888888888874 5432 234
Q ss_pred CceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCC-CCCCEEEEEeccCCHHHHHHHHHHHHHHHhhhh
Q 011801 351 NAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQC-TEPGWFRVCFANMDDDTLQVALNRIAAFVQQDK 428 (477)
Q Consensus 351 ~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~-~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~~~ 428 (477)
.+|+|+|++++... . +..++.+.+. ++||.+.||..|.. .+++++|++|+. +++++++++++|++++++.+
T Consensus 307 ~~g~~~~~~~~~~~----~-~~~~l~~~l~-~~gi~v~~g~~~~~~~~~~~iR~s~~~-~~e~l~~~~~~l~~~~~~~~ 378 (380)
T PRK06225 307 SHGNMMVIDISEAG----I-DPEDLVEYLL-ERKIFVRQGTYTSKRFGDRYIRVSFSI-PREQVEVFCEEFPDVVETLR 378 (380)
T ss_pred CCCeEEEEEccccc----C-CHHHHHHHHH-HCCEEEcCCcccCcCCCCceEEEEeCC-CHHHHHHHHHHHHHHHHHhh
Confidence 56789999987421 1 1235667666 56999999987653 246799999985 88999999999999998654
No 94
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=7.1e-43 Score=352.03 Aligned_cols=320 Identities=19% Similarity=0.288 Sum_probs=253.1
Q ss_pred ccccccccccccccHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEe
Q 011801 38 GGVIQLGLAENQLCFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMG 117 (477)
Q Consensus 38 ~~~i~l~~~~n~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t 117 (477)
.++|+|+.|||+++++.. + . ......|++. +.++||+++|++++ +++++|++|
T Consensus 31 ~~~~~l~~ne~~~~~~~~---~-~--------------~~~~~~Yp~~-~~~~Lr~aia~~~~--------~~~~~I~it 83 (354)
T PRK04635 31 RGDIWINANESPFNNEYK---L-D--------------LARLNRYPEC-QPPELINAYSAYAG--------VAPEQILTS 83 (354)
T ss_pred CCcEEeeCCCCCCCCChh---h-h--------------hHHhccCCCC-CHHHHHHHHHHHhC--------cCHHHEEEe
Confidence 356999999999976521 1 0 1235679887 47999999999985 689999999
Q ss_pred CChHHHHHHHHHHhcCCC-CeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEE
Q 011801 118 GGATGANELIMFCLANPG-DAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLI 196 (477)
Q Consensus 118 ~G~t~al~~i~~~l~~~G-d~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vi 196 (477)
+|+++++.+++.+++++| |.|+++.|+|+.|...++.. |+++++++++. +|.+|.+.++. + .++|+|+
T Consensus 84 ~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~y~~~~~~~-g~~v~~v~~~~--~~~~~~~~l~~-~-------~~~~li~ 152 (354)
T PRK04635 84 RGADEAIELLIRAFCEPGQDSIACFGPTYGMYAISAETF-NVGVKALPLTA--DYQLPLDYIEQ-L-------DGAKLVF 152 (354)
T ss_pred CCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHHc-CCEEEEEecCC--CCCCCHHHHHh-c-------cCCCEEE
Confidence 999999999999999999 99999999999998888776 99999999863 57888888862 2 1789999
Q ss_pred EeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCce
Q 011801 197 ITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFR 276 (477)
Q Consensus 197 i~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~R 276 (477)
+||||||||.+++.+++++|++.|+ +++||+||+|.++.. . .+...+.. ..+++++++||||.+|+||+|
T Consensus 153 i~nP~NPTG~~~~~~~l~~l~~~~~--~~~vivDeay~~~~~--~--~s~~~~~~----~~~~~iv~~S~SK~~~l~GlR 222 (354)
T PRK04635 153 ICNPNNPTGTVIDRADIEQLIEMTP--DAIVVVDEAYIEFCP--E--YSVADLLA----SYPNLVVLRTLSKAFALAGAR 222 (354)
T ss_pred EeCCCCCCCccCCHHHHHHHHHhCC--CcEEEEeCchHhhcc--C--cchHHHHh----hCCCEEEEechHHHhhhhHHH
Confidence 9999999999999999999999876 499999999987532 1 23333333 347789999999999999999
Q ss_pred EEEEEeCCHHHHHHHHHhcccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCC-CeEecCCceEE
Q 011801 277 VGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVG-INCLKSNAGLF 355 (477)
Q Consensus 277 vG~i~~~~~~i~~~~~~~~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~g-i~~~~~~~g~~ 355 (477)
+||++++++ +.+.+.+....+.++.+.|.++..+|.+..+ .++++..+.++++++.+.+.|++++ +.+.+++ |+|
T Consensus 223 lG~~i~~~~-~~~~l~~~~~~~~~~~~~~~~a~~~l~~~~~--~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~-g~f 298 (354)
T PRK04635 223 CGFTLANEE-LIEILMRVIAPYPVPLPVSEIATQALSEAGL--ARMKFQVLDLNAQGARLQAALSMYGGAKVLEGN-GNY 298 (354)
T ss_pred HhhhhCCHH-HHHHHHhhcCCCCCCHHHHHHHHHHHhcccH--HHHHHHHHHHHHHHHHHHHHHHhCCCceECCCC-CcE
Confidence 999999655 4454444444455788889888888876542 3356677788999999999999985 7777765 579
Q ss_pred EEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHH
Q 011801 356 FWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAF 423 (477)
Q Consensus 356 ~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~ 423 (477)
+|++++. . .++.+ .+.++||.|++++.+ ..++++||+++ ++++++.++++|++.
T Consensus 299 ~~~~~~~---~------~~~~~-~l~~~gv~v~~~~~~--~~~~~lRis~~--~~e~~~~l~~al~~~ 352 (354)
T PRK04635 299 VLAKFDD---V------DAVFK-ALWDAGIVARAYKDP--RLANCIRFSFS--NRAETDKLIGLIRNQ 352 (354)
T ss_pred EEEECCC---H------HHHHH-HHHHCCEEEEECCCC--CCCCeEEEEeC--CHHHHHHHHHHHHHh
Confidence 9998862 1 13444 456779999876543 24679999998 689999999998753
No 95
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=1.4e-42 Score=347.29 Aligned_cols=313 Identities=19% Similarity=0.260 Sum_probs=244.6
Q ss_pred CccccccccccccccHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEE
Q 011801 37 PGGVIQLGLAENQLCFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVM 116 (477)
Q Consensus 37 ~~~~i~l~~~~n~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~ 116 (477)
+..+|+|+.|||+++++... +. ...+..||+.. .+||+++|++++ + .++++|++
T Consensus 23 ~~~~i~ls~Nenp~~~~~~~--~~---------------~~~~~~Yp~~~--~~L~~~ia~~~~------~-~~~~~I~i 76 (339)
T PRK06959 23 YDAWLDLSTGINPHGYPVPP--VP---------------ADAWRRLPEDD--DGLAACAARYYG------A-PDAAHVLP 76 (339)
T ss_pred hhhhceeccCCCCCCCCCCC--CC---------------HHHHHhCCCch--HHHHHHHHHHhC------C-CCcccEEE
Confidence 46789999999998764100 00 01345698753 899999999997 2 14689999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEE
Q 011801 117 GGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLI 196 (477)
Q Consensus 117 t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vi 196 (477)
|+|+++++..+.. ++++|| |+++.|+|+.|...++.. |+++++++.+. +.+.+ .++.++
T Consensus 77 ~~Gs~e~i~~l~~-~~~~g~-v~v~~P~y~~y~~~~~~~-g~~~~~v~~~~--------~~~~~----------~~~~v~ 135 (339)
T PRK06959 77 VAGSQAAIRALPA-LLPRGR-VGIAPLAYSEYAPAFARH-GHRVVPLDEAA--------DTLPA----------ALTHLI 135 (339)
T ss_pred CcCHHHHHHHHHH-hcCCCe-EEEcCCCcHHHHHHHHHC-CCEEEeecccc--------hhccc----------cCCEEE
Confidence 9999999997765 567877 899999999999999877 99999988642 22211 456899
Q ss_pred EeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCce
Q 011801 197 ITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFR 276 (477)
Q Consensus 197 i~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~R 276 (477)
+||||||||++++.+++++|++.|.+++.++|+||+|.++.+. .++.... ..+++++++||||.||+||+|
T Consensus 136 l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~----~s~~~~~-----~~~~vi~l~SfSK~~gl~GlR 206 (339)
T PRK06959 136 VVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPA----ASLAAHT-----DRPGLVVLRSVGKFFGLAGVR 206 (339)
T ss_pred EeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCc----ccchhcc-----CCCCEEEEecChhhcCCcchh
Confidence 9999999999999999999999999999999999999975432 2333322 236789999999999999999
Q ss_pred EEEEEeCCHHHHHHHHHhcccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEE
Q 011801 277 VGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFF 356 (477)
Q Consensus 277 vG~i~~~~~~i~~~~~~~~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~ 356 (477)
+||+++++ .+.+.+.+....+.++.++|.++..+|++.++ .++.++.++++++++.+.|++.|+++. .+++|+
T Consensus 207 iGy~v~~~-~li~~l~~~~~~~~vs~~~q~a~~~~L~~~~~----~~~~~~~~~~~r~~l~~~L~~~g~~~~--~~~~f~ 279 (339)
T PRK06959 207 AGFVLAAP-ALLAALRDALGAWTVSGPARHAVRAAFADAAW----QAAMRERLAADGARLAALLRAHGFAVH--ATPLFS 279 (339)
T ss_pred eEEEecCH-HHHHHHHHhcCCCCCcHHHHHHHHHHhCcHHH----HHHHHHHHHHHHHHHHHHHHHCCCCcc--CcceEE
Confidence 99999965 45565665555666899999999999998665 566778999999999999999998765 357999
Q ss_pred EeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhhhh
Q 011801 357 WMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQQDK 428 (477)
Q Consensus 357 ~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~~~ 428 (477)
|++++. ..++++.+. ++||.|++ | ..++|+||+++. ++++++.+++.|+++++...
T Consensus 280 ~~~~~~---------~~~l~~~l~-~~GI~vr~---~--~~~~~lRisi~~-~~~e~~~l~~al~~~~~~~~ 335 (339)
T PRK06959 280 WTDDPR---------AAALHAALA-RRGIWTRY---F--APPPSVRFGLPA-DEAEWQRLEDALAECVPTLA 335 (339)
T ss_pred EEeCCC---------HHHHHHHHH-hCCeEEEE---C--CCCCeEEEECCC-CHHHHHHHHHHHHHHHHHHh
Confidence 998762 124666655 55999984 3 235699999953 77899999999998886543
No 96
>PRK03321 putative aminotransferase; Provisional
Probab=100.00 E-value=4.2e-42 Score=346.35 Aligned_cols=340 Identities=20% Similarity=0.311 Sum_probs=265.1
Q ss_pred hcCCCCCCCCCCccccccccccccc-cHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccC
Q 011801 26 FDRNPFHPTQNPGGVIQLGLAENQL-CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRG 104 (477)
Q Consensus 26 ~~~~~~~~~~~~~~~i~l~~~~n~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g 104 (477)
+.-.+|++..++.++|+|+.+++.. +++.+.+.+.+.. ..+..|++ .|.+++|+++|++++
T Consensus 10 ~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~a~~~~~-------------~~~~~y~~-~g~~~lr~~ia~~~~---- 71 (352)
T PRK03321 10 AGIPAYVPGKTVPGAIKLSSNETPFGPLPSVRAAIARAA-------------AGVNRYPD-MGAVELRAALAEHLG---- 71 (352)
T ss_pred hccCCCCCCCCcccceeccCCCCCCCCCHHHHHHHHHHH-------------HhcCcCCC-CcHHHHHHHHHHHhC----
Confidence 3445688878777899999999988 4566666665531 23456864 689999999999996
Q ss_pred CCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHH
Q 011801 105 GRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYER 184 (477)
Q Consensus 105 ~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~ 184 (477)
+++++|++|+|+++++..++..+++|||.|+++.|+|..|...++.. |.+++.+++++ ++.+|++++++++++
T Consensus 72 ----~~~~~I~~~~G~~~~l~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~-g~~~~~v~~~~--~~~~~~~~l~~~~~~ 144 (352)
T PRK03321 72 ----VPPEHVAVGCGSVALCQQLVQATAGPGDEVIFAWRSFEAYPILVQVA-GATPVQVPLTP--DHTHDLDAMAAAITD 144 (352)
T ss_pred ----cCHHHEEECCCHHHHHHHHHHHhcCCCCEEEeCCCCHHHHHHHHHHc-CCEEEEccCCC--CCCCCHHHHHHhhcc
Confidence 57899999999999999999999999999999999999887777766 99999999864 367899999988753
Q ss_pred HHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEe
Q 011801 185 AQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIY 264 (477)
Q Consensus 185 ~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~ 264 (477)
++++|+++||+||||.+++.+++.++++.+ +++++||+||+|.++.+.+....++. ... ..+++++++
T Consensus 145 ------~~~~v~l~~p~NPtG~~~~~~~l~~l~~~~-~~~~~ii~De~y~~~~~~~~~~~~~~-~~~----~~~~vi~~~ 212 (352)
T PRK03321 145 ------RTRLIFVCNPNNPTGTVVTPAELARFLDAV-PADVLVVLDEAYVEYVRDDDVPDGLE-LVR----DHPNVVVLR 212 (352)
T ss_pred ------CCCEEEEeCCCCCcCCCcCHHHHHHHHHhC-CCCeEEEEechHHHhccCcCCCcHHH-HHh----hCCCEEEEe
Confidence 788999999999999999999988888876 47999999999998877653322322 222 347899999
Q ss_pred cCCcccCCCCceEEEEEeCCHHHHHHHHHhcccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCC
Q 011801 265 SLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVG 344 (477)
Q Consensus 265 SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~g 344 (477)
||||.||+||+|+||+++++ .+.+.+.+....+.+|.++|.++...|...+. +. +..+++.++++.+.+.|++.|
T Consensus 213 S~SK~~g~~GlRiG~~v~~~-~~~~~~~~~~~~~~~s~~~q~~a~~~l~~~~~---~~-~~~~~~~~~r~~~~~~L~~~~ 287 (352)
T PRK03321 213 TFSKAYGLAGLRVGYAVGHP-EVIAALRKVAVPFSVNSLAQAAAIASLAAEDE---LL-ERVDAVVAERDRVRAALRAAG 287 (352)
T ss_pred cchHHhhhHHHhhhhhcCCH-HHHHHHHHhcCCCCCCHHHHHHHHHHhcCHHH---HH-HHHHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999964 45555555555556899999988888875432 23 333444556678899999888
Q ss_pred CeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHH
Q 011801 345 INCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFV 424 (477)
Q Consensus 345 i~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~ 424 (477)
+.+.+ .+|+|+|++++.. ..++.+.+ .++||.|.| |+ +.++||+++ +.+++++++++|++++
T Consensus 288 ~~~~~-~~g~~i~i~l~~~--------~~~~~~~l-~~~gI~v~~---~~---~~~iRi~~~--~~~~~~~~~~al~~~~ 349 (352)
T PRK03321 288 WTVPP-SQANFVWLPLGER--------TADFAAAA-AEAGVVVRP---FA---GEGVRVTIG--APEENDAFLRAARAWR 349 (352)
T ss_pred CccCC-CCCCEEEEeCCCC--------HHHHHHHH-HHCCEEEEc---cC---CCcEEEeeC--CHHHHHHHHHHHHHHh
Confidence 87654 4578999998521 12466665 567999987 42 346999997 7899999999999876
Q ss_pred h
Q 011801 425 Q 425 (477)
Q Consensus 425 ~ 425 (477)
.
T Consensus 350 ~ 350 (352)
T PRK03321 350 A 350 (352)
T ss_pred c
Confidence 4
No 97
>PRK08354 putative aminotransferase; Provisional
Probab=100.00 E-value=1e-41 Score=337.37 Aligned_cols=309 Identities=22% Similarity=0.326 Sum_probs=238.2
Q ss_pred CCCCCCCccccccccccccccHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccC
Q 011801 31 FHPTQNPGGVIQLGLAENQLCFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFD 110 (477)
Q Consensus 31 ~~~~~~~~~~i~l~~~~n~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~ 110 (477)
||-+.++.++|+|+.++|+++++.+.+.+.+.. .....|+. ...+|+++|++++
T Consensus 1 ~~~~~~~~~~i~l~~~~np~~p~~~~~a~~~~~-------------~~~~~yp~---~~~l~~~ia~~~~---------- 54 (311)
T PRK08354 1 YHGGIREEGLIDFSASVNPYPPEWLDEMFERAK-------------EISGRYTY---YEWLEEEFSKLFG---------- 54 (311)
T ss_pred CCCCCCccceeEecCCCCCCCCHHHHHHHHHHH-------------HHhhcCCC---hHHHHHHHHHHHC----------
Confidence 566778899999999999998777777776531 12346764 3789999999985
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCC
Q 011801 111 PDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASI 190 (477)
Q Consensus 111 ~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~ 190 (477)
++|++|+|+++++.+++..+ .+||.|++++|+|+.|...++.. |++++.++ +|++.++++++
T Consensus 55 -~~I~vt~G~~~al~~~~~~~-~~gd~vlv~~P~y~~~~~~~~~~-g~~~~~~~--------~d~~~l~~~~~------- 116 (311)
T PRK08354 55 -EPIVITAGITEALYLIGILA-LRDRKVIIPRHTYGEYERVARFF-AARIIKGP--------NDPEKLEELVE------- 116 (311)
T ss_pred -CCEEECCCHHHHHHHHHHhh-CCCCeEEEeCCCcHHHHHHHHHc-CCEEeecC--------CCHHHHHHhhc-------
Confidence 47999999999999888654 48999999999999999998877 99997654 46788877664
Q ss_pred CeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCccc
Q 011801 191 NIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDM 270 (477)
Q Consensus 191 ~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~ 270 (477)
+.+.++++|||||||.+++.+++++|+++|+++|+++|+||+|.++.+++.. . ..+++++++||||.|
T Consensus 117 ~~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~-~-----------~~~~vi~~~S~SK~~ 184 (311)
T PRK08354 117 RNSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKPES-P-----------EGENIIKLRTFTKSY 184 (311)
T ss_pred CCCEEEEecCCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhccccccc-c-----------CCCcEEEEeccHhhc
Confidence 4567999999999999999999999999999999999999999987775421 1 247899999999999
Q ss_pred CCCCceEEEEEeCCHHHHHHHHHhcccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecC
Q 011801 271 GLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKS 350 (477)
Q Consensus 271 g~~G~RvG~i~~~~~~i~~~~~~~~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~ 350 (477)
|+||+|+||+++ +.+.+++....+.++...|.++..++++. + +++.+.++.+.++++.+.+.+ ..++
T Consensus 185 ~l~GlRiG~~v~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~l~~~l------~~~~ 251 (311)
T PRK08354 185 GLPGIRVGYVKG----FEEAFRSVRMPWSIGSTGYAFLEFLIEDD-F--EHLRKTMPLIWREKERFEKAL------YVKS 251 (311)
T ss_pred CCccceeeeeee----hHHHHHHcCCCccCCHHHHHHHHHHHHhH-H--HHHHHHHHHHHHHHHHHHHhc------CCCC
Confidence 999999999998 34445555566667777788888887742 2 334555555666655554443 2345
Q ss_pred CceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHH
Q 011801 351 NAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAF 423 (477)
Q Consensus 351 ~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~ 423 (477)
+++ |+|++++. +.++++.+ .++||.|.||+.|+ .++|+||+++ ..++.+++++.|+++
T Consensus 252 ~~~-~~~~~~~~---------~~~~~~~l-~~~gv~v~~g~~f~--~~~~iRi~~~--~~~~~~~l~~al~~~ 309 (311)
T PRK08354 252 DAN-FFIKDVGD---------AEKFVEFL-KRNGILVRDCTSFG--LPGYIRFSVR--DREENEKLIRALREW 309 (311)
T ss_pred CCc-EEEEECCC---------HHHHHHHH-HHCCeEEEecccCC--CCCeEEEEeC--CHHHHHHHHHHHHHh
Confidence 565 55566542 12466665 45699999999996 3689999998 566777777777765
No 98
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-41 Score=341.39 Aligned_cols=325 Identities=19% Similarity=0.323 Sum_probs=251.6
Q ss_pred cccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeC
Q 011801 40 VIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGG 118 (477)
Q Consensus 40 ~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~ 118 (477)
.++|+.++|+++ ++.+.+.+.+.-.. .....|++. +.+++|+++|++++ +++++|++|+
T Consensus 24 ~~~l~~~~~~~~~p~~~~~a~~~~~~~-----------~~~~~y~~~-~~~~lr~~ia~~~~--------~~~~~i~it~ 83 (351)
T PRK14807 24 KYKMDANETPFELPEEVIKNIQEIVKS-----------SQVNIYPDP-TAEKLREELARYCS--------VVPTNIFVGN 83 (351)
T ss_pred eeEccCCCCCCCCCHHHHHHHHHHhhc-----------CcccCCCCc-cHHHHHHHHHHHhC--------CCcccEEEec
Confidence 389999999885 45556655542110 134568765 46999999999985 6789999999
Q ss_pred ChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEe
Q 011801 119 GATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIIT 198 (477)
Q Consensus 119 G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~ 198 (477)
|+++++.+++.+++++||.|++++|+|+.+...++.. |.++++++++. +|.+|++++++++++. ++|+|+++
T Consensus 84 G~~~~l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~v~~~~--~~~~d~~~l~~~~~~~-----~~k~v~l~ 155 (351)
T PRK14807 84 GSDEIIHLIMLAFINKGDVVIYPHPSFAMYSVYSKIA-GAVEIPVKLKE--DYTYDVGSFIKVIEKY-----QPKLVFLC 155 (351)
T ss_pred CHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHc-CCeEEEeecCC--CCCCCHHHHHHHhhcc-----CCCEEEEe
Confidence 9999999999999999999999999999888877776 99999999863 5789999999988632 78999999
Q ss_pred CCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEE
Q 011801 199 NPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVG 278 (477)
Q Consensus 199 nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG 278 (477)
||+||||.+++.++++++++ +++.++|+||+|.++ + +....+ ... ..+++++++||||.+|+||+|+|
T Consensus 156 ~p~NPtG~~~~~~~l~~l~~---~~~~~~ivDe~y~~~-~-~~~~~~---~~~----~~~~vi~~~S~SK~~~~~GlRiG 223 (351)
T PRK14807 156 NPNNPTGSVIEREDIIKIIE---KSRGIVVVDEAYFEF-Y-GNTIVD---VIN----EFENLIVLRTLSKAFGLAGLRVG 223 (351)
T ss_pred CCCCCCCCCCCHHHHHHHHH---hCCCEEEEeCcchhh-c-ccchHH---Hhh----hCCCEEEEecchHhcccchhcee
Confidence 99999999999888777765 556789999999874 3 322222 222 34789999999999999999999
Q ss_pred EEEeCCHHHHHHHHHhcccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEecCCceEEEE
Q 011801 279 IVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLKSNAGLFFW 357 (477)
Q Consensus 279 ~i~~~~~~i~~~~~~~~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~~~~g~~~~ 357 (477)
|+++++ .+.+.+......+.++.++|.++..+|+++. +++..+.+.++++.+.+.|.+. |+.+.++ +|+|+|
T Consensus 224 ~~v~~~-~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~-----~~~~~~~~~~~r~~l~~~l~~~~g~~~~~~-~~~~~~ 296 (351)
T PRK14807 224 YAVANE-NILKYLNLVKSPYNINSLSQVIALKVLRTGV-----LKERVNYILNERERLIKELSKIPGIKVYPS-KTNFIL 296 (351)
T ss_pred eeecCH-HHHHHHHHccCCCCcCHHHHHHHHHHHhHHH-----HHHHHHHHHHHHHHHHHHHHhCCCcEECcC-CccEEE
Confidence 999954 4555555555556688999999999998642 3445556778888899999876 8877654 567999
Q ss_pred eeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHH
Q 011801 358 MDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFV 424 (477)
Q Consensus 358 ~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~ 424 (477)
++++. +.++++.+. ++||.|++++.+. ..++|+||+|+ +.++++.+++.|++++
T Consensus 297 i~~~~---------~~~~~~~l~-~~gV~v~~~~~~~-~~~~~iRis~~--~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 297 VKFKD---------ADYVYQGLL-ERGILVRDFSKVE-GLEGALRITVS--SCEANDYLINGLKELL 350 (351)
T ss_pred EEcCC---------HHHHHHHHH-HCCEEEEECCCCC-CCCCeEEEEcC--CHHHHHHHHHHHHHhh
Confidence 99872 124555555 5699999865422 34679999998 5788899999988764
No 99
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=100.00 E-value=2.3e-41 Score=337.65 Aligned_cols=310 Identities=19% Similarity=0.265 Sum_probs=238.5
Q ss_pred CccccccccccccccHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEE
Q 011801 37 PGGVIQLGLAENQLCFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVM 116 (477)
Q Consensus 37 ~~~~i~l~~~~n~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~ 116 (477)
+.++|+|+.|||+++++.. . +.. ..+..|++. ..+||++||++++ +++|++
T Consensus 19 ~~~~i~l~~ne~p~~~~~~-~-~~~---------------~~~~~yp~~--~~~Lr~~ia~~~~----------~~~I~i 69 (330)
T PRK05664 19 LADWLDLSTGIAPWPWPVP-A-IPA---------------DAWARLPET--DDGLEAAARAYYG----------APQLLP 69 (330)
T ss_pred HHHheeecCCcCCCCCCCc-c-cCH---------------HHHHhCCCC--hHHHHHHHHHHhC----------CCCEEE
Confidence 3468999999999865421 0 100 123458764 3899999999986 479999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEE
Q 011801 117 GGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLI 196 (477)
Q Consensus 117 t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vi 196 (477)
|+|+++++.+++. +.+||+|++++|+|+.|...++.. |+++++++++ +++++++ ++++++
T Consensus 70 t~Gs~~al~~~~~--~~~gd~v~v~~P~y~~~~~~~~~~-g~~~~~v~~~----------~~~~~~~-------~~~~v~ 129 (330)
T PRK05664 70 VAGSQAAIQALPR--LRAPGRVGVLSPCYAEHAHAWRRA-GHQVRELDEA----------EVEAALD-------SLDVLV 129 (330)
T ss_pred CcCHHHHHHHHHH--ccCCCEEEEcCCChHHHHHHHHHc-CCeEEEechh----------hHhhhhc-------CCCEEE
Confidence 9999999998863 579999999999999999998887 9999998853 3444442 567899
Q ss_pred EeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCce
Q 011801 197 ITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFR 276 (477)
Q Consensus 197 i~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~R 276 (477)
++|||||||.+++.+++++|+++|++++++||+||+|.++ .. ..++..+. ..+++++++||||.+|+||+|
T Consensus 130 l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~--~~--~~s~~~~~-----~~~~vi~~~SfSK~~gl~GlR 200 (330)
T PRK05664 130 VVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDN--TP--QHSLAACA-----HRPGLIVLRSFGKFFGLAGAR 200 (330)
T ss_pred EeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccC--CC--cccccccc-----cCCCEEEEeeccccccCCCcc
Confidence 9999999999999999999999999999999999999764 22 12333332 346899999999999999999
Q ss_pred EEEEEeCCHHHHHHHHHhcccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEE
Q 011801 277 VGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFF 356 (477)
Q Consensus 277 vG~i~~~~~~i~~~~~~~~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~ 356 (477)
+||++++++ +.+.+.+....+.++.++|.++..+|.+.++ .++.++.++++++.+.+.|++.|++... ..++|+
T Consensus 201 iG~~v~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~----~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~~f~ 274 (330)
T PRK05664 201 LGFVLAEPA-LLRALAELLGPWTVSGPTRWLAQAALADTPW----QRRQRERLLAASQRLAALLRRHGLTPAG-GCALFQ 274 (330)
T ss_pred eEEEEeCHH-HHHHHHHhcCCCCCCHHHHHHHHHHHhChHH----HHHHHHHHHHHHHHHHHHHHHCCCcccC-CcceEE
Confidence 999999655 4454544444455889999999999987654 4566788999999999999998875322 223899
Q ss_pred EeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhh
Q 011801 357 WMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 357 ~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~ 426 (477)
|++++. ..++++.+ .++||.|++ |. .++++||+++. ++++++++++.|+++.++
T Consensus 275 ~~~~~~---------~~~~~~~l-~~~gi~v~~---f~--~~~~iRis~~~-~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 275 WVRTED---------AAALHEFL-ARRGILTRL---FE--QPASLRFGLPA-DEADWARLDQALLAYRKE 328 (330)
T ss_pred EEecCC---------HHHHHHHH-HHCCeEEEE---CC--CCCeEEEECCC-CHHHHHHHHHHHHHHHhh
Confidence 998752 12455555 466999974 43 36799999985 577888888888877654
No 100
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=100.00 E-value=2.5e-41 Score=339.90 Aligned_cols=335 Identities=22% Similarity=0.392 Sum_probs=265.2
Q ss_pred CCCCCCCC--Ccccccccccccccc-HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCC
Q 011801 29 NPFHPTQN--PGGVIQLGLAENQLC-FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGG 105 (477)
Q Consensus 29 ~~~~~~~~--~~~~i~l~~~~n~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~ 105 (477)
.||++..+ +.++|+|++++|+++ ++.+.+.+.+.. .....|++..+ +++|+++|++++
T Consensus 8 ~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~a~~~~~-------------~~~~~y~~~~~-~~lr~~ia~~~~----- 68 (346)
T TIGR01141 8 SPYQPARELGGKEVIKLNSNENPFGPPPKAKEALRAEA-------------DKLHRYPDPDP-AELKQALADYYG----- 68 (346)
T ss_pred CCCCCCCcCCCCceEEccCCCCCCCCCHHHHHHHHHhH-------------HHhhcCCCCCH-HHHHHHHHHHhC-----
Confidence 34545442 367999999999885 345566555531 13457887766 999999999996
Q ss_pred CCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHH
Q 011801 106 RVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERA 185 (477)
Q Consensus 106 ~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~ 185 (477)
+++++|++|+|+++++..++..++++||+|++++|+|+.+...++.. |++++.++++. ++.+|++++++++.
T Consensus 69 ---~~~~~i~~~~G~~~~l~~~~~~l~~~gd~v~~~~p~y~~~~~~~~~~-g~~~~~~~~~~--~~~~d~~~l~~~~~-- 140 (346)
T TIGR01141 69 ---VDPEQILLGNGSDEIIELLIRAFLEPGDAVLVPPPTYSMYEISAKIH-GAEVVKVPLDE--DGQLDLEDILVAID-- 140 (346)
T ss_pred ---cChHHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHHc-CCeEEEeccCC--CCCCCHHHHHHhcC--
Confidence 56889999999999999999999999999999999999888777766 99999999864 36789999998753
Q ss_pred HHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEec
Q 011801 186 QEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYS 265 (477)
Q Consensus 186 ~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~S 265 (477)
.++++|++++|+||||.+++.++++++++.++ +++++|+||+|+++.+.. .+.+ ... ..+++++++|
T Consensus 141 ----~~~~~v~l~~p~NptG~~~~~~~~~~l~~~~~-~~~~ii~D~~y~~~~~~~-~~~~---~~~----~~~~~i~~~S 207 (346)
T TIGR01141 141 ----DKPKLVFLCSPNNPTGNLLSRSDIEAVLERTP-EDALVVVDEAYGEFSGEP-STLP---LLA----EYPNLIVLRT 207 (346)
T ss_pred ----CCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCcEEEEECchhhhcCCc-cHHH---HHh----hCCCEEEEeh
Confidence 27899999999999999999999999999887 799999999998654322 2122 222 2356889999
Q ss_pred CCcccCCCCceEEEEEeCCHHHHHHHHHhcccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-C
Q 011801 266 LSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-G 344 (477)
Q Consensus 266 lSK~~g~~G~RvG~i~~~~~~i~~~~~~~~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-g 344 (477)
+||.+|++|+|+||+++++ .+.+.++.....+.+++++|.++..++++.+ ++.+.+++++++++.+.+.|+++ |
T Consensus 208 ~sK~~g~~G~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~l~~~L~~~~g 282 (346)
T TIGR01141 208 LSKAFGLAGLRIGYAIANA-EIIDALNKVRAPFNLSRLAQAAAIAALRDDD----FIEKTVEEINAERERLYDGLKKLPG 282 (346)
T ss_pred hhHhhhchhhhceeeecCH-HHHHHHHhccCCCCCCHHHHHHHHHHhCCHH----HHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999954 4555555555455678899999999998754 36677888899999999999988 8
Q ss_pred CeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHH
Q 011801 345 INCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIA 421 (477)
Q Consensus 345 i~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~ 421 (477)
+++.+ .+|+|+|++++. . ..++++.+. ++||.+.||+.|+.. ++++||+++ ++++++++++.|+
T Consensus 283 ~~~~~-~~g~~~~~~~~~--~------~~~~~~~L~-~~gI~v~~g~~f~~~-~~~iRls~~--~~~~i~~~~~~l~ 346 (346)
T TIGR01141 283 LEVYP-SDANFVLIRFPR--D------ADALFEALL-EKGIIVRDLNSYPGL-PNCLRITVG--TREENDRFLAALR 346 (346)
T ss_pred CEECC-CcCCEEEEecCC--C------HHHHHHHHH-HCCeEEEeCCCcCCC-CCeEEEecC--CHHHHHHHHHHhC
Confidence 87654 457899999874 1 125666666 569999999988644 789999998 7899999988764
No 101
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=2.4e-41 Score=341.97 Aligned_cols=326 Identities=19% Similarity=0.325 Sum_probs=255.3
Q ss_pred CccccccccccccccH-HHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEE
Q 011801 37 PGGVIQLGLAENQLCF-DLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIV 115 (477)
Q Consensus 37 ~~~~i~l~~~~n~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~ 115 (477)
+.++|+|+.++|++++ +.+.+.+.+.. .....|++..+ +++|+++|++++ +++++|+
T Consensus 33 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~-------------~~~~~y~~~~~-~~lr~~ia~~~~--------~~~~~i~ 90 (361)
T PRK00950 33 PESIIKLGSNENPLGPSPKAVEAIEKEL-------------SKIHRYPEPDA-PELREALSKYTG--------VPVENII 90 (361)
T ss_pred ccceEEccCCCCCCCCCHHHHHHHHHHH-------------HhhcCCCCCCH-HHHHHHHHHHhC--------CCHHHEE
Confidence 4578999999998854 45555554421 12456877654 999999999985 5789999
Q ss_pred E-eCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeE
Q 011801 116 M-GGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKG 194 (477)
Q Consensus 116 ~-t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~ 194 (477)
+ |+|+++++..++++++++||.|++++|+|+.+...++.. |++++.++.+ ++|.+|++++++++.. ++++
T Consensus 91 ~~~~Ga~~~i~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~-g~~~~~~~~~--~~~~~~~~~l~~~~~~------~~~~ 161 (361)
T PRK00950 91 VGGDGMDEVIDTLMRTFIDPGDEVIIPTPTFSYYEISAKAH-GAKPVYAKRE--EDFSLDVDSVLNAITE------KTKV 161 (361)
T ss_pred EeCCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHc-CCEEEEeecC--CCCCcCHHHHHHHhcc------CCCE
Confidence 9 799999999999999999999999999999988777766 9999998854 4678999999988753 7889
Q ss_pred EEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCC
Q 011801 195 LIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPG 274 (477)
Q Consensus 195 vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G 274 (477)
|++++|+||||.+++.+++.+|+ +++|+++|+||+|.++. +.. ...+.. ..+++++++||||.+|+||
T Consensus 162 v~~~~p~nptG~~~~~~~l~~l~---~~~~~~li~De~y~~~~--~~~---~~~~~~----~~~~vi~~~S~SK~~g~~G 229 (361)
T PRK00950 162 IFLCTPNNPTGNLIPEEDIRKIL---ESTDALVFVDEAYVEFA--EYD---YTPLAL----EYDNLIIGRTFSKVFGLAG 229 (361)
T ss_pred EEEeCCCCCCCCCcCHHHHHHHH---HHCCcEEEEECchhhhC--ccc---hHHHHH----hcCCEEEEEeehHhhcCch
Confidence 99999999999999977766654 57899999999998753 222 222332 3468899999999999999
Q ss_pred ceEEEEEeCCHHHHHHHHHhcccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceE
Q 011801 275 FRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGL 354 (477)
Q Consensus 275 ~RvG~i~~~~~~i~~~~~~~~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~ 354 (477)
+|+||++++++ +...+++....+.+++++|.++..++.+.++ +++..++++++++.+.+.|. +.+. +.+|+
T Consensus 230 lRiG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~----~~~~~~~~~~~r~~l~~~l~---~~~~-~~~~~ 300 (361)
T PRK00950 230 LRIGYGFVPEW-LIDYYMRAKTPFSLTRLSQAAAIAALSDKEY----IEKSIEHGIKSREYLYNELP---FKVY-PSEAN 300 (361)
T ss_pred hhcchhcCCHH-HHHHHHHhcCCCCCCHHHHHHHHHHhcCHHH----HHHHHHHHHHHHHHHHhhcC---eeEC-CCcce
Confidence 99999999655 4444554544455888999999999987554 55666777888888887775 5554 45678
Q ss_pred EEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHH
Q 011801 355 FFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFV 424 (477)
Q Consensus 355 ~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~ 424 (477)
|+|++++.. ...++++.+.+ +||.|+||..|...+++++|++++ +++++++++++|++++
T Consensus 301 ~i~~~~~~~-------~~~~~~~~l~~-~gv~v~~~~~f~~~~~~~lRis~~--~~~~~~~l~~~L~~il 360 (361)
T PRK00950 301 FVLVDVTPM-------TAKEFCEELLK-RGVIVRDCTSFRGLGDYYIRVSIG--TFEENERFLEILKEIV 360 (361)
T ss_pred EEEEECCCC-------CHHHHHHHHHH-CCEEEeeCCccCCCCCCeEEEECC--CHHHHHHHHHHHHHHh
Confidence 999999421 12357777765 599999999987656789999998 6789999999999875
No 102
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5e-41 Score=335.65 Aligned_cols=317 Identities=17% Similarity=0.281 Sum_probs=244.1
Q ss_pred CCccccccccccccccH-HHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcE
Q 011801 36 NPGGVIQLGLAENQLCF-DLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRI 114 (477)
Q Consensus 36 ~~~~~i~l~~~~n~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i 114 (477)
.+.++|+|+.|+|++++ +.+.+.+.+.-. ......|++. |.++||+++|+|+++. + +++++|
T Consensus 17 ~~~~~i~l~~~~~~~~~p~~~~~~~~~~~~-----------~~~~~~Y~~~-~~~~Lr~aia~~~~~~-~----~~~~~i 79 (335)
T PRK14808 17 EKRDRTYLALNENPFPFPEDLVDEVFRRLN-----------SDTLRIYYDS-PDEELIEKILSYLDTD-F----LSKNNV 79 (335)
T ss_pred CCCceeEecCCCCCCCCCHHHHHHHHHHhh-----------hhhhhcCCCC-ChHHHHHHHHHHhCCC-C----CCcceE
Confidence 44688999999999964 455555544211 0123457765 8999999999999853 2 679999
Q ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeE
Q 011801 115 VMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKG 194 (477)
Q Consensus 115 ~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~ 194 (477)
++|+|+++++.+++.++ |.|++++|+|+.|...++.. |++++.++++. +|.++... ++ +.++
T Consensus 80 ~it~Ga~~~i~~~~~~~----d~v~v~~P~y~~~~~~~~~~-g~~~~~v~~~~--~~~~~~~~----~~-------~~~~ 141 (335)
T PRK14808 80 SVGNGADEIIYVMMLMF----DRSVFFPPTYSCYRIFAKAV-GAKFLEVPLTK--DLRIPEVN----VG-------EGDV 141 (335)
T ss_pred EEcCCHHHHHHHHHHHh----CcEEECCCCHHHHHHHHHHc-CCeEEEecCCC--cCCCChhH----cc-------CCCE
Confidence 99999999999999888 67999999999999999987 99999999864 35554322 11 4689
Q ss_pred EEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCC
Q 011801 195 LIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPG 274 (477)
Q Consensus 195 vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G 274 (477)
++++|||||||.+++++++++|+ +++++||+||+|.++ .+..+.+ .+. ..+++++++||||.+|+||
T Consensus 142 i~i~nP~NPTG~~~s~~~l~~l~----~~~~~ii~DE~Y~~f--~~~~~~~---~~~----~~~~vi~~~S~SK~~~l~G 208 (335)
T PRK14808 142 VFIPNPNNPTGHVFEREEIERIL----KTGAFVALDEAYYEF--HGESYVD---LLK----KYENLAVIRTFSKAFSLAA 208 (335)
T ss_pred EEEeCCCCCCCCCcCHHHHHHHH----hcCCEEEEECchhhh--cCCchHH---HHH----hCCCEEEEEechhhccCcc
Confidence 99999999999999999998886 479999999999974 3322222 222 3468999999999999999
Q ss_pred ceEEEEEeCCHHHHHHHHHhcccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceE
Q 011801 275 FRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGL 354 (477)
Q Consensus 275 ~RvG~i~~~~~~i~~~~~~~~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~ 354 (477)
+|+||++++++ +.+.+.+....+.++.++|.++..++++.++ ..+..+.+.++++.+.+.|++.|+++.++++ .
T Consensus 209 lRvG~~v~~~~-~~~~l~~~~~~~~~~~~~q~a~~~~l~~~~~----~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~g-~ 282 (335)
T PRK14808 209 QRIGYVVSSEK-FIDAYNRVRLPFNVSYVSQMFAKVALDHREI----FEERTKFIVEERERMKSALREMGYRITDSRG-N 282 (335)
T ss_pred cceEEEEeCHH-HHHHHHHhcCCCCCCHHHHHHHHHHHhCHHH----HHHHHHHHHHHHHHHHHHHHHCCCEECCCCC-e
Confidence 99999999665 4555555544455888999999888876443 4556667778889999999999988877755 6
Q ss_pred EEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHH
Q 011801 355 FFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAF 423 (477)
Q Consensus 355 ~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~ 423 (477)
|+|+.++.. +..++.+.+ .++||.|+. | ++++||+++ +.++++.+++.|++|
T Consensus 283 f~~~~l~~~-------~~~~~~~~l-~~~Gi~V~~---~----~~~~Risi~--~~~~~~~~~~~l~~~ 334 (335)
T PRK14808 283 FVFIFMEKE-------EKERLLEHL-RAKNIAVRS---F----REGVRITIG--KREENDMILKELEVF 334 (335)
T ss_pred EEEEeCCCc-------cHHHHHHHH-HHCCeEEEE---C----CCCeEEecC--CHHHHHHHHHHHHhh
Confidence 889998731 112455554 456999984 3 357999998 689999999999865
No 103
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.6e-41 Score=336.39 Aligned_cols=316 Identities=17% Similarity=0.279 Sum_probs=243.0
Q ss_pred cccccccccccccH-HHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEe
Q 011801 39 GVIQLGLAENQLCF-DLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMG 117 (477)
Q Consensus 39 ~~i~l~~~~n~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t 117 (477)
++|+|+.++|++++ +.+.+.+.+.-.. .....|++ .|.++||+++|+|++ +++++|++|
T Consensus 19 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~Y~~-~g~~~lr~~ia~~~~--------~~~~~I~~t 78 (337)
T PRK03967 19 YRIWLDKNENPFDLPEELKEEIFEELKR-----------VPFNRYPH-ITSDPLREAIAEFYG--------LDAENIAVG 78 (337)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHhhc-----------CccccCCC-CCHHHHHHHHHHHhC--------cCcceEEEc
Confidence 57999999999753 4455544432100 12457875 689999999999996 678999999
Q ss_pred CChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEE
Q 011801 118 GGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLII 197 (477)
Q Consensus 118 ~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii 197 (477)
+|+++++..++.++ +||.|++++|+|+.|...++.. |+++++++++. +|.+|++++++++. +++++++
T Consensus 79 ~G~~~~l~~~~~~~--~gd~V~v~~P~y~~~~~~~~~~-g~~~~~v~~~~--~~~~d~~~l~~~~~-------~~~~v~~ 146 (337)
T PRK03967 79 NGSDELISYLVKLF--EGKHIVITPPTFGMYSFYAKLN-GIPVIDVPLKE--DFTIDGERIAEKAK-------NASAVFI 146 (337)
T ss_pred CCHHHHHHHHHHHh--CCCeEEEeCCChHHHHHHHHHc-CCeEEEeecCC--CCCcCHHHHHHhcc-------CCCEEEE
Confidence 99999999998877 7999999999999888777766 99999999863 57899999887542 6788999
Q ss_pred eCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceE
Q 011801 198 TNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRV 277 (477)
Q Consensus 198 ~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~Rv 277 (477)
+|||||||.+++.+++.+++ ++++++|+||+|.++. ..++. .... ..+++++++||||.||+||+|+
T Consensus 147 ~~P~NPtG~~~~~~~l~~i~----~~~~~ii~De~y~~~~--~~~~~---~~~~----~~~~vi~l~S~SK~~~l~GlRi 213 (337)
T PRK03967 147 CSPNNPTGNLQPEEEILKVL----ETGKPVVLDEAYAEFS--GKSLI---GLID----EYPNLILLRTFSKAFGLAGIRA 213 (337)
T ss_pred eCCCCCCCCCCCHHHHHHHH----hcCCEEEEECchhhhc--ccchH---HHHh----hCCCEEEEecchHhhcchhhhh
Confidence 99999999999987777665 3699999999999753 22222 2222 3467999999999999999999
Q ss_pred EEEEeCCHHHHHHHHHhcccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEE
Q 011801 278 GIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFW 357 (477)
Q Consensus 278 G~i~~~~~~i~~~~~~~~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~ 357 (477)
||++++++ +.+.+.+....+.++.++|.++..+|++.++ ..+..+.+.++++.+.+.|.+.. .+.+++|+|
T Consensus 214 G~iv~~~~-~i~~~~~~~~~~~~~~~~q~~~~~~l~~~~~----~~~~~~~~~~~r~~l~~~L~~~~----~~~~~~~~~ 284 (337)
T PRK03967 214 GYAIANEE-IIDALYRIKPPFSLNILTMKIVRLALDHYDL----IEERIDYIIKERERVRRELGEYA----YPSDANFLL 284 (337)
T ss_pred eeeecCHH-HHHHHHhhcCCCCCCHHHHHHHHHHHhCHHH----HHHHHHHHHHHHHHHHHHhccCc----CCCCCcEEE
Confidence 99999654 5555555555566889999999999987654 34444555667778888887642 356789999
Q ss_pred eeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhhh
Q 011801 358 MDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQQD 427 (477)
Q Consensus 358 ~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~~ 427 (477)
++++ +++.+++ +||.|+++.. ..++++||+++ +.++.+++++.|+++.+.+
T Consensus 285 ~~~~-------------~~~~l~~-~gi~v~~~~~---~~~~~~Ri~~~--~~~~~~~l~~~l~~~~~~~ 335 (337)
T PRK03967 285 LKLD-------------AYDYLLE-NGIVVRKLSG---RLEGHIRVTVG--KREENDEFIKALKEIKEGY 335 (337)
T ss_pred EhHH-------------HHHHHHH-CCEEEEeCCC---CCCCeEEEecC--CHHHHHHHHHHHHHHHHhc
Confidence 9774 3455554 5999998653 23679999998 5778888899988877653
No 104
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=100.00 E-value=1.5e-40 Score=331.86 Aligned_cols=312 Identities=22% Similarity=0.301 Sum_probs=250.7
Q ss_pred ccccccccccccccHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEe
Q 011801 38 GGVIQLGLAENQLCFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMG 117 (477)
Q Consensus 38 ~~~i~l~~~~n~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t 117 (477)
.++|+|+.++|+++++.+. .. ...+..|++..+ +++|+++|++++ +++++|++|
T Consensus 17 ~~~~~~~~~~~~~~~~~~~----~~-------------~~~~~~y~~~~~-~~lr~~la~~~~--------~~~~~i~~t 70 (330)
T TIGR01140 17 EDWLDFSTGINPLGPPVPP----IP-------------ASAWARYPDPEY-DELRAAAAAYYG--------LPAASVLPV 70 (330)
T ss_pred hheeEccccCCCCCCChhh----cc-------------hHHHhhCCCccH-HHHHHHHHHHhC--------CChhhEEEC
Confidence 3579999999999876211 11 134678988876 999999999986 568999999
Q ss_pred CChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEE
Q 011801 118 GGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLII 197 (477)
Q Consensus 118 ~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii 197 (477)
+|+++++..++.+ +.+| .|++++|+|..+...++.. |+++++++ |+++++++++ ++++|++
T Consensus 71 ~G~~~~i~~~~~~-l~~g-~vl~~~p~y~~~~~~~~~~-g~~~~~~~---------d~~~l~~~~~-------~~~~v~i 131 (330)
T TIGR01140 71 NGAQEAIYLLPRL-LAPG-RVLVLAPTYSEYARAWRAA-GHEVVELP---------DLDRLPAALE-------ELDVLVL 131 (330)
T ss_pred CCHHHHHHHHHHH-hCCC-eEEEeCCCcHHHHHHHHHc-CCEEEEeC---------CHHHHHhhcc-------cCCEEEE
Confidence 9999999998766 4677 6999999999999888876 99998887 5788887763 5678999
Q ss_pred eCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceE
Q 011801 198 TNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRV 277 (477)
Q Consensus 198 ~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~Rv 277 (477)
++||||||.+++.+++++|+++|+++|++||+||+|.++.+. .++....+ ..+++++++||||.||+||+|+
T Consensus 132 ~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~----~~~~~~~~----~~~~~i~~~S~SK~~g~~G~R~ 203 (330)
T TIGR01140 132 CNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPD----ASLAPQAA----RFPGLVVLRSLTKFFGLAGLRL 203 (330)
T ss_pred eCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCc----cchhhHhc----cCCCEEEEEecchhhcCchhhh
Confidence 999999999999999999999999999999999999876543 13333322 3578999999999999999999
Q ss_pred EEEEeCCHHHHHHHHHhcccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCC-CeEecCCceEEE
Q 011801 278 GIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVG-INCLKSNAGLFF 356 (477)
Q Consensus 278 G~i~~~~~~i~~~~~~~~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~g-i~~~~~~~g~~~ 356 (477)
||++++++ +...+..+...+.+|+++|.++..++.+.++ .+..+++++++++.+.+.|++.+ +.+. +.+|+|+
T Consensus 204 G~i~~~~~-~~~~l~~~~~~~~~s~~~q~~~~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~f~ 277 (330)
T TIGR01140 204 GFVVAHPA-LLARLREALGPWTVNGPARAAGRAALADTAW----QAATRARLAAERARLAALLARLGGLEVV-GGTALFL 277 (330)
T ss_pred hheeCCHH-HHHHHHhcCCCCCchHHHHHHHHHHHhchHH----HHHHHHHHHHHHHHHHHHHHhCCCceEC-CCCCeEE
Confidence 99999665 5555655555556889999999999998665 45667889999999999999997 5554 4578999
Q ss_pred EeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHH
Q 011801 357 WMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRI 420 (477)
Q Consensus 357 ~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l 420 (477)
|++++. ..++++.+++ +||.+.||..|...+++++||+++. +.++ +.++.+|
T Consensus 278 ~~~~~~---------~~~l~~~l~~-~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~-~~~~~~l 329 (330)
T TIGR01140 278 LVRTPD---------AAALHEALAR-RGILIRDFDNFPGLDPRYLRFALPT-DEEN-DRLEEAL 329 (330)
T ss_pred EEEcCC---------HHHHHHHHHH-CCEEEEECCCCCCCCCCEEEEEecC-HHHH-HHHHHhh
Confidence 998873 1257777776 5999999999965566799999984 3333 7777665
No 105
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=7e-38 Score=302.09 Aligned_cols=341 Identities=18% Similarity=0.254 Sum_probs=266.0
Q ss_pred cccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCC
Q 011801 78 DIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTG 157 (477)
Q Consensus 78 ~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g 157 (477)
...+|+...|.++|...|.++.+...... ...+.+|++|+|.|.+++.+++.++++||.|+++.++|+.....++.. |
T Consensus 92 ~alQYg~s~G~peLl~fik~h~~~~ih~p-~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~s~~a~-g 169 (472)
T KOG0634|consen 92 RALQYGQSSGIPELLLFIKDHNRPTIHAP-PYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQSMEAL-G 169 (472)
T ss_pred hhhccccccCcHHHHHHHHHhccccccCC-CCCCceEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHHhcccc-C
Confidence 45689999999999999999665222211 133458999999999999999999999999999999999998888877 9
Q ss_pred cEEEEEeccCCCCcccCHHHHHHHHHHHHHh---CCCeeEEEEeCC--CCCcccCCCHHHHHHHHHHHHhcCeEEEeccc
Q 011801 158 VQIVPVHCDISNNFKITREALEAAYERAQEA---SINIKGLIITNP--SNPLGTTLDRDTLKSLVSFINDKNIHLVCDEI 232 (477)
Q Consensus 158 ~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~---~~~~k~vii~nP--~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~ 232 (477)
++++||++|.+ +++++.|++.+.+.... +++++ |+.|-| +||||.+++.++.++|.++|++|+++||+||.
T Consensus 170 v~~ipv~md~~---Gi~pE~l~~il~~w~~~~~k~~~p~-vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdp 245 (472)
T KOG0634|consen 170 VKIIPVKMDQD---GIDPESLEEILSNWKPGSYKKPKPH-VLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDP 245 (472)
T ss_pred ceEEeccccCC---CCCHHHHHHHHhcCCcccccCCCCe-EEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCc
Confidence 99999999754 48999999999876433 24444 677777 79999999999999999999999999999999
Q ss_pred ccccccCC--------CCcccHHHhhh----h---ccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhcc-
Q 011801 233 YAATVFSS--------PKFTSVAEVIQ----E---MDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSS- 296 (477)
Q Consensus 233 y~~~~~~~--------~~~~s~~~~~~----~---~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~~- 296 (477)
|.-+.|.. .+..+...+.. . .+ ..++||...||||.++ ||+|+||+.+++..+...+.....
T Consensus 246 Yy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslD-tdGrVIr~dSFSKiia-PGlRlG~it~~~~~l~ril~~ae~~ 323 (472)
T KOG0634|consen 246 YYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLD-TDGRVIRNDSFSKIIA-PGLRLGWITGNSLFLKRILDLAEVA 323 (472)
T ss_pred cceeeccccCCCccccCccccHHHHHHhhcCCccccc-ccccEEeccchhhhhc-CcceeEEeecCHHHHHHHhhhccee
Confidence 98766652 12222112221 1 11 4689999999999997 999999999977666665543311
Q ss_pred cCCCchHHHHHHHHhcCCh---hhHHHHHHHHHHHHHHHHHHHHHHHhhC---C-CeEecCCceEEEEeeccc--hhhcc
Q 011801 297 FGLVSSQTQYLLASMLSDD---EFVDNFLVETSKRLAKRHHNFTKGLEQV---G-INCLKSNAGLFFWMDLRH--LLKEK 367 (477)
Q Consensus 297 ~~~vs~~~q~~~~~~L~~~---~~~~~~~~~~~~~l~~r~~~l~~~L~~~---g-i~~~~~~~g~~~~~~l~~--~~~~~ 367 (477)
-...|.++|.++.++|..- .| -+++.+.+..+..|+..++.+|.+. + .++.+|.+|+|+|++++- ....+
T Consensus 324 t~~pSg~sq~iv~a~l~~wgqeG~-~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~~~~~~~ 402 (472)
T KOG0634|consen 324 TSGPSGFSQGIVYAMLKRWGQEGF-LRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYINFDTKK 402 (472)
T ss_pred ecCcccccHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEeccccccccc
Confidence 1126778888888888743 33 4788999999999999999999885 4 678899999999999981 11222
Q ss_pred CchHHHHHHHHHHHhcCeEEeCCCCCCCC-CC----CEEEEEeccCCHHHHHHHHHHHHHHHhhh
Q 011801 368 TLEGEIALWRTIVNDVKLNVSPGSSFQCT-EP----GWFRVCFANMDDDTLQVALNRIAAFVQQD 427 (477)
Q Consensus 368 ~~~~e~~l~~~ll~~~gI~v~pg~~f~~~-~~----~~~Rl~~~~~~~e~l~~~l~~l~~~~~~~ 427 (477)
...+-+++....+.+.||.+.+|+.|... +. -+||++++..+.|+++++++|+..+++++
T Consensus 403 ~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~~e~l~~g~~rf~~~ike~ 467 (472)
T KOG0634|consen 403 SINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAEPEKLDEGIERFGSVIKEH 467 (472)
T ss_pred chHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecCCHHHHHHHHHHHHHHHHHH
Confidence 33333345555666779999999999754 22 29999999889999999999999999875
No 106
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=100.00 E-value=1.7e-33 Score=282.37 Aligned_cols=318 Identities=30% Similarity=0.535 Sum_probs=253.6
Q ss_pred ccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCc
Q 011801 79 IAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGV 158 (477)
Q Consensus 79 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~ 158 (477)
...|++..|..+++++++++++..++ ....++++++++|+++++..++.++.++||+|+++.|+|..+...++.. |.
T Consensus 29 ~~~~~~~~~~~~l~~~l~~~l~~~~~--~~~~~~~~~~~~~~t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~-~~ 105 (350)
T cd00609 29 LLGYYPDPGLPELREAIAEWLGRRGG--VDVPPEEIVVTNGAQEALSLLLRALLNPGDEVLVPDPTYPGYEAAARLA-GA 105 (350)
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHHhC--CCCCcceEEEecCcHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHC-CC
Confidence 45688888999999999999997654 2345778999999999999999999999999999999999999998877 99
Q ss_pred EEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEeccccccccc
Q 011801 159 QIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVF 238 (477)
Q Consensus 159 ~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~ 238 (477)
+++.++.+..+.+..+.+.++... +.++++|++++|+||||.+++.+++++|+++|+++|+++|+|++|+++.+
T Consensus 106 ~~~~i~~~~~~~~~~~~~~~~~~~------~~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~ 179 (350)
T cd00609 106 EVVPVPLDEEGGFLLDLELLEAAK------TPKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVY 179 (350)
T ss_pred EEEEEecccccCCccCHHHHHhhc------CccceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhcee
Confidence 999999876554443324444432 34889999999999999999999999999999999999999999997655
Q ss_pred CCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhccc--CCCchHHHHHHHHhcCChh
Q 011801 239 SSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSF--GLVSSQTQYLLASMLSDDE 316 (477)
Q Consensus 239 ~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~~~--~~vs~~~q~~~~~~L~~~~ 316 (477)
.+... +...... ..+.+++++|+||.++++|.|+|+++++++.+.+.++....+ +..+...|.++..+|....
T Consensus 180 ~~~~~-~~~~~~~----~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 254 (350)
T cd00609 180 DGEPP-PALALLD----AYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKLLPYTTSGPSTLSQAAAAAALDDGE 254 (350)
T ss_pred CCccc-ccccCcC----ccCcEEEEeecccccCCcccceEEEecCHHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCcH
Confidence 44332 1001111 346788999999999999999999999774565555544333 4577788888888888763
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhCCCeE-ecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCC
Q 011801 317 FVDNFLVETSKRLAKRHHNFTKGLEQVGINC-LKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQC 395 (477)
Q Consensus 317 ~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~-~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~ 395 (477)
+..++.++++.++++.+.+.|++.+... ..+.+|+++|++++... ..+.+..++.+.||.+.++..|..
T Consensus 255 ---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~~~-------~~~~~~~~l~~~gi~i~~~~~~~~ 324 (350)
T cd00609 255 ---EHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDLPEGD-------DEEFLERLLLEAGVVVRPGSAFGE 324 (350)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEEecCCCC-------hHHHHHHHHHhCCEEEeccccccc
Confidence 4467778889999999999999986543 46678899999988531 123566777888999999988875
Q ss_pred CCCCEEEEEeccCCHHHHHHHHHHHH
Q 011801 396 TEPGWFRVCFANMDDDTLQVALNRIA 421 (477)
Q Consensus 396 ~~~~~~Rl~~~~~~~e~l~~~l~~l~ 421 (477)
..+.++|++++.. +++++.++++|+
T Consensus 325 ~~~~~iRi~~~~~-~~~i~~~~~al~ 349 (350)
T cd00609 325 GGEGFVRLSFATP-EEELEEALERLA 349 (350)
T ss_pred CCCCeEEEEeeCC-HHHHHHHHHHhh
Confidence 5677999999976 999999999886
No 107
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=8.4e-34 Score=269.79 Aligned_cols=339 Identities=25% Similarity=0.419 Sum_probs=269.3
Q ss_pred cccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhc-CCCCeEEEcCCCccchHHHHhhhC
Q 011801 78 DIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLA-NPGDAFLVPSPYYAAFDRDLSWRT 156 (477)
Q Consensus 78 ~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~-~~Gd~vlv~~P~y~~~~~~~~~~~ 156 (477)
.+..|.+..|++-+|+.+|+|..++-| ++.+|++|++|.|++.|+..++.+++ ++.+.|++|-|.||-|...+...
T Consensus 105 s~GaYS~SqGv~~vR~~VA~~I~rRDG--~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYPLYsAti~l~- 181 (475)
T KOG0258|consen 105 SLGAYSDSQGVPGVRKHVAEFIERRDG--IPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYPLYSATISLL- 181 (475)
T ss_pred cccccccccCChhHHHHHHHHHHhccC--CCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCchhHHHHHHh-
Confidence 456799999999999999999998877 78999999999999999999999874 57799999999999998888877
Q ss_pred CcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEeccccccc
Q 011801 157 GVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAAT 236 (477)
Q Consensus 157 g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~ 236 (477)
|...+++-++++.+|.+|.++|+..++++. .+++++++++.||.||||.+++++.+++|+.+|.+++++|+.||+|.+-
T Consensus 182 ~~~~v~YyLdEe~~W~ld~~el~~~~~eA~-k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~N 260 (475)
T KOG0258|consen 182 GGTQVPYYLDEESNWSLDVAELERSVDEAR-KGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDN 260 (475)
T ss_pred CCcccceeeccccCCCCCHHHHHHHHHHHh-ccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHHHHhh
Confidence 999999999999999999999999999987 7899999999999999999999999999999999999999999999999
Q ss_pred ccCCC-CcccHHHhhhhccCC-CCc--EEEEecCCcc-cCCCCceEEEEEe--CCHHHHHHHHHhcccCCCch-HHHHHH
Q 011801 237 VFSSP-KFTSVAEVIQEMDCN-RDL--IHIIYSLSKD-MGLPGFRVGIVYS--FNDTVVNCGRKMSSFGLVSS-QTQYLL 308 (477)
Q Consensus 237 ~~~~~-~~~s~~~~~~~~~~~-~~~--viiv~SlSK~-~g~~G~RvG~i~~--~~~~i~~~~~~~~~~~~vs~-~~q~~~ 308 (477)
+|... .|.|+...+.+++.. +++ ++.++|.||. +|=.|.|-||.-+ ..+.+.+...++.+-...++ ..|...
T Consensus 261 vy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl~si~lc~~V~GQ~~v 340 (475)
T KOG0258|consen 261 VYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKKLASIKLCPQVSGQKLV 340 (475)
T ss_pred ccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHHHHHHhhhhcCCccchhhh
Confidence 88864 899999988877532 223 4556889998 5568899999743 34455555555554433333 345555
Q ss_pred HHhcC-----ChhhHHHHH---HHHHHHHHHHHHHHHHHHhhC-CCeEecCCceEEEEeeccchhh------ccCchHHH
Q 011801 309 ASMLS-----DDEFVDNFL---VETSKRLAKRHHNFTKGLEQV-GINCLKSNAGLFFWMDLRHLLK------EKTLEGEI 373 (477)
Q Consensus 309 ~~~L~-----~~~~~~~~~---~~~~~~l~~r~~~l~~~L~~~-gi~~~~~~~g~~~~~~l~~~~~------~~~~~~e~ 373 (477)
..+.. +..+ +.+. ......++.|.+.+.+.+..+ |+.|.+++|.+|++..+.=..+ ......++
T Consensus 341 dl~VnPP~Pgd~Sy-~~~~~Ekd~il~~l~~ra~l~~~~~ns~~gi~cn~~qGAMY~fP~i~lP~kaie~A~~~~~~PD~ 419 (475)
T KOG0258|consen 341 DLVVNPPKPGDPSY-DLFSSEKDGILSSLRSRAKLTEDAFNSLEGISCNPVQGAMYLFPQISLPPKAIEAAKALGIAPDE 419 (475)
T ss_pred ceecCCCCCCCcch-hhhhhhhHhHHHHHHHHhHHHHHHHhhcCceeeccCccceeecccccCCHHHHHHHHHhCCCCcH
Confidence 55554 2222 2222 334667888888999999988 9999999999999876541111 11222344
Q ss_pred HHHHHHHHhcCeEEeCCCCCCCCCC-CEEEEEeccCCHHHHHHHHHHHHHHHh
Q 011801 374 ALWRTIVNDVKLNVSPGSSFQCTEP-GWFRVCFANMDDDTLQVALNRIAAFVQ 425 (477)
Q Consensus 374 ~l~~~ll~~~gI~v~pg~~f~~~~~-~~~Rl~~~~~~~e~l~~~l~~l~~~~~ 425 (477)
-.+.+||+..||.+.|||.|+..+. -+||.+|- +.. + +.++++++|-+
T Consensus 420 FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiL--p~~-~-~~i~~~~~fH~ 468 (475)
T KOG0258|consen 420 FYCLKLLEATGICVVPGSGFGQKEGTYHFRTTIL--PPG-L-EIIEKFKKFHA 468 (475)
T ss_pred HHHHHHHHhcCeEEecCCCCCCCCceeEEEEeec--Cch-h-HHHHHHHHHHH
Confidence 5788999999999999999996432 37999986 333 4 77777777654
No 108
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=2.4e-35 Score=257.72 Aligned_cols=146 Identities=66% Similarity=1.211 Sum_probs=136.1
Q ss_pred ccccchhhccCCCCCCccchhhhhhcCCCCCCCCCCccccccccccccccHHHHHHHHHhCCCCccccccc-cccccccc
Q 011801 2 GILSKIATNNGHGEDSAYFDGWKAFDRNPFHPTQNPGGVIQLGLAENQLCFDLIKDWITKNPYASICTAEG-VEVFKDIA 80 (477)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~n~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~ 80 (477)
++||++|++++|||+|+||+||++|++||||+..||+|+|+||++||++++|++..|+.++|++.++++++ +..+.++.
T Consensus 7 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~np~G~I~lg~aEN~l~~dli~~~i~~~p~~d~~~~~~i~~~~~~~a 86 (153)
T PLN02994 7 QLLSKLALADKHGEASPYFAGWKAYDLNPFDLLHNPQGIIQMGLAENQLCSDLIEEWIEENPHADICTAEGTIDSFKDIA 86 (153)
T ss_pred hhhhhhcccccCCCCchHHHHHHHHhcCCCCcccCCCceEeeehhhhHhHHHHHHHHHhCCCccccCCcHHHHHHHHHHh
Confidence 48999999999999999999999999999999999999999999999999999999999988777777666 44555667
Q ss_pred ccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccc
Q 011801 81 IFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAA 147 (477)
Q Consensus 81 ~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~ 147 (477)
.|++++|.++||+++|+|+.+.+|.++.+++++|++|+|+++|++.++++|++|||.|++++|+|++
T Consensus 87 ~Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 87 LFQDYHGLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYAA 153 (153)
T ss_pred cCCCCCCcHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence 8999999999999999999999887777899999999999999999999999999999999999974
No 109
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=100.00 E-value=2e-32 Score=282.57 Aligned_cols=317 Identities=15% Similarity=0.225 Sum_probs=239.5
Q ss_pred cccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcE
Q 011801 80 AIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQ 159 (477)
Q Consensus 80 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~ 159 (477)
..|.+..|.++||++++++++ .+++++|+|+++|+.+++.++++||| |++++|.|+.+...+... |.+
T Consensus 72 ~~Y~~~~g~~~Lreaia~~~~----------~~~vv~t~ggt~A~~~~~~all~pGD-Vii~~p~~~~~~~~i~~~-G~~ 139 (460)
T PRK13238 72 EAYAGSRSYYRLEDAVKDIFG----------YPYTIPTHQGRAAEQILFPVLIKKGD-VVPSNYHFDTTRAHIELN-GAT 139 (460)
T ss_pred cccCCCCCHHHHHHHHHHHhC----------CCcEEECCCHHHHHHHHHHHhCCCCC-EEccCCcccchHHHHHHc-CCE
Confidence 479999999999999999997 35799999999999999999999999 999999999998878776 999
Q ss_pred EEEEeccCC------CCcc--cCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcc-cCCCHHHHHHHHHHHHhcCeEEEec
Q 011801 160 IVPVHCDIS------NNFK--ITREALEAAYERAQEASINIKGLIITNPSNPLG-TTLDRDTLKSLVSFINDKNIHLVCD 230 (477)
Q Consensus 160 ~~~v~~~~~------~~f~--i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG-~~~~~~~l~~l~~~~~~~~~~lI~D 230 (477)
++.++++.. ++|+ +|+++|++++.+.. ..++++|++++|+|||| .+++.+++++|.++|++||++||+|
T Consensus 140 ~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~--~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~D 217 (460)
T PRK13238 140 AVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVG--AENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVID 217 (460)
T ss_pred EEEEeccccccccccccccCCcCHHHHHHHHhhcC--CCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEE
Confidence 999998642 4566 99999999986421 13699999999999998 9999999999999999999999999
Q ss_pred cccc--ccccCC-----CCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceE------EEEEeCCHHHHHHHHHhc--
Q 011801 231 EIYA--ATVFSS-----PKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRV------GIVYSFNDTVVNCGRKMS-- 295 (477)
Q Consensus 231 e~y~--~~~~~~-----~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~Rv------G~i~~~~~~i~~~~~~~~-- 295 (477)
+++. ..+|.. ....++.++. ..++|++|.+.+.|+|+ |+++++++.+.+.++...
T Consensus 218 aa~~~e~a~f~~~~e~g~~~~si~~i~----------~~~~s~~D~~~~Sg~K~g~~~~GG~i~~~d~~l~~~~~~~~~~ 287 (460)
T PRK13238 218 AARFAENAYFIKQREPGYKDKSIKEIA----------REMFSYADGLTMSAKKDAMVNIGGLLCFRDEDLFTECRTLCIL 287 (460)
T ss_pred CcchhhhhhhhhhccccccCCCHHHHh----------hhhcccCcEEEEecccCCCCcceeEEEcChHHHHHHhhhcccc
Confidence 9763 233432 1234544432 22345555555555554 466665556666555442
Q ss_pred -----ccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchhh---cc
Q 011801 296 -----SFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLK---EK 367 (477)
Q Consensus 296 -----~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~---~~ 367 (477)
.++..+...|.+++..|.+..- +.++..+ .+++++|.+.|.+.|+++..|.+|+|+++++...+. ..
T Consensus 288 ~~g~~t~~g~~~~~~~Ala~~l~e~~~-~~~~~~~----~~~~~~l~~~L~~~G~~~~~p~Gg~~v~~d~~~~~~~~~~~ 362 (460)
T PRK13238 288 YEGFPTYGGLAGRDMEALAVGLYEGMD-EDYLAYR----IGQVEYLGEGLEEAGVPIQTPAGGHAVFVDAGKFLPHIPAE 362 (460)
T ss_pred cCCcccccCcHHHHHHHHHhhHHHhhC-hHHHHHH----HHHHHHHHHHHHHCCCCeEccCCceEEEEEchhcCCCCCCC
Confidence 2333455567777766653110 2233333 225689999999999999999999999999976432 11
Q ss_pred CchHHHHHHHHHHHhcCeEEeCCCCCCCCC-----------CCEEEEEecc--CCHHHHHHHHHHHHHHHhh
Q 011801 368 TLEGEIALWRTIVNDVKLNVSPGSSFQCTE-----------PGWFRVCFAN--MDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 368 ~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~-----------~~~~Rl~~~~--~~~e~l~~~l~~l~~~~~~ 426 (477)
.+. ..+++..|+.+.||.+.|++.|.... ...+|+++.. .++++++.+.++|+.+.++
T Consensus 363 ~~~-~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~~ 433 (460)
T PRK13238 363 QFP-AQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVKEN 433 (460)
T ss_pred CCc-hHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEecccccCCHHHHHHHHHHHHHHHHh
Confidence 222 25789999999999999999887533 4689999975 3999999999999998865
No 110
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-33 Score=253.71 Aligned_cols=305 Identities=20% Similarity=0.330 Sum_probs=241.5
Q ss_pred ccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCC-CeEEEcCCCccchHHHHhhhCCcE
Q 011801 81 IFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPG-DAFLVPSPYYAAFDRDLSWRTGVQ 159 (477)
Q Consensus 81 ~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~G-d~vlv~~P~y~~~~~~~~~~~g~~ 159 (477)
.|+++. ..+++.+++.- -++++|+|+++.|+.+.+.++++|.+.|| ++|++-.|+|..|.-.+... +++
T Consensus 65 ~~~d~r-nk~ls~a~~~d--------kpLt~dnic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~v~A~iN-d~e 134 (375)
T KOG0633|consen 65 VYPDPR-NKRLSDALAQD--------KPLTSDNICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYVVDAAIN-DAE 134 (375)
T ss_pred ccCCcc-cchhhhhcccC--------CCCCccceEEecCcHHHHHHHHhheecCCccceeecCCcceeEEEEeecC-Cce
Confidence 355543 24555555443 24789999999999999999999999999 99999999999998888776 999
Q ss_pred EEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccC
Q 011801 160 IVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFS 239 (477)
Q Consensus 160 ~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~ 239 (477)
++.+|.++ +|+++.+++.+.++. ..++|.+++|+|+||||..+..+.+++|++.-. |.++|+||+|.+ |.
T Consensus 135 Vvkvpl~p--dF~lnvdai~evl~~----ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~--nglVVvDEAYid--Fs 204 (375)
T KOG0633|consen 135 VVKVPLNP--DFSLNVDAIAEVLEL----DSKIKCIFLTSPGNPTGSIIKEDDILKILEMPD--NGLVVVDEAYID--FS 204 (375)
T ss_pred EEEecCCC--CccccHHHHHHHHhc----cccceEEEEcCCCCCCcccccHHHHHHHHhCCC--CcEEEEeeeeEe--ec
Confidence 99999875 899999999998875 347999999999999999999999999988543 889999999987 55
Q ss_pred CCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhcccCCCchHHHHHHHHhcCChhhHH
Q 011801 240 SPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVD 319 (477)
Q Consensus 240 ~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~~~~~vs~~~q~~~~~~L~~~~~~~ 319 (477)
+. .|-..++. .+.+++++.+|||.||++|+|+||-+. +..+...+.++.....+|..+..++.++|++.. -
T Consensus 205 g~--~S~~~lV~----kYpNLivlqTlSKsfGLAGiRvG~~~~-~~~ia~iln~~KaPYNiS~~~s~~AL~Als~~n--~ 275 (375)
T KOG0633|consen 205 GV--ESRMKLVK----KYPNLIVLQTLSKSFGLAGIRVGYGAF-PLSIAEILNRAKAPYNISVAGSVAALAALSDSN--G 275 (375)
T ss_pred cc--cccchHhH----hCCceeehhhhhhhcCcceeEeecccc-cHHHHHHHHhccCCccccchhHHHHHHhcCccc--c
Confidence 42 24444555 679999999999999999999999988 455778888887777799988888889999654 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhC-CCe-EecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCC
Q 011801 320 NFLVETSKRLAKRHHNFTKGLEQV-GIN-CLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTE 397 (477)
Q Consensus 320 ~~~~~~~~~l~~r~~~l~~~L~~~-gi~-~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~ 397 (477)
+.++..++.+-+.+.++.+.|.++ ++. +..+...+|+.+++.+..+ .-...+..+++.+.||.|+- ..++
T Consensus 276 kkme~~rdaiv~er~RL~keLt~v~~~~~~~gg~daNFiLi~v~~~~n----~~akkly~q~at~~gVvVRf----rgse 347 (375)
T KOG0633|consen 276 KKMEDVRDAIVRERERLFKELTEVPFLNDYPGGSDANFILIEVTGGDN----GMAKKLYKQDATKMGVVVRF----RGSE 347 (375)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhcCccccCCCCcccccEEEEEEcCCCc----HHHHHHHHHHHHhcceEEEE----cCCc
Confidence 346777888888889999999887 332 2333444788888875321 11235677778889999973 3222
Q ss_pred ---CCEEEEEeccCCHHHHHHHHHHHHHHH
Q 011801 398 ---PGWFRVCFANMDDDTLQVALNRIAAFV 424 (477)
Q Consensus 398 ---~~~~Rl~~~~~~~e~l~~~l~~l~~~~ 424 (477)
.|++|++++ ++|+.+.+++.|++++
T Consensus 348 ~~c~G~lRitvG--t~EentvL~k~~K~~l 375 (375)
T KOG0633|consen 348 EGCKGYLRITVG--TPEENTVLMKCLKQFL 375 (375)
T ss_pred cccceeEEEEcC--CcccchHHHHHHHhhC
Confidence 579999999 7888999999998864
No 111
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.98 E-value=7e-30 Score=255.33 Aligned_cols=282 Identities=13% Similarity=0.145 Sum_probs=205.1
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEc---CCCccchHHHHhhhCCcEEEEEe
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVP---SPYYAAFDRDLSWRTGVQIVPVH 164 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~---~P~y~~~~~~~~~~~g~~~~~v~ 164 (477)
..+|++++|+|++ ++++++++++|+++|+..++.+|++|||.|+++ .|+|+.+...++.. |++++.+
T Consensus 56 ~~~Le~~lA~~~g--------~~~e~ilv~~gg~~a~~~~~~al~~~gd~Vli~~~d~p~~~s~~~~~~l~-ga~~~~~- 125 (346)
T TIGR03576 56 EEKVQELGREHLG--------GPEEKILVFNRTSSAILATILALEPPGRKVVHYLPEKPAHPSIPRSCKLA-GAEYFES- 125 (346)
T ss_pred HHHHHHHHHHHcC--------CCcceEEEECCHHHHHHHHHHHhCCCCCEEEECCCCCCCchhHHHHHHHc-CCEEecc-
Confidence 3566677777765 578999999999999999999999999999975 47888888888876 8876432
Q ss_pred ccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcc
Q 011801 165 CDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFT 244 (477)
Q Consensus 165 ~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~ 244 (477)
.++++++. ..++++|+++ ++||+|.+++.+++++|+++|+++|++||+||+|+..+.......
T Consensus 126 --------~~l~~l~~--------~~~~~lIiit-g~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~ 188 (346)
T TIGR03576 126 --------DELSELKK--------IDGTSLVVIT-GSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQP 188 (346)
T ss_pred --------CCHHHHhh--------CcCceEEEEE-CCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCCCC
Confidence 13444321 1256777775 579999999999999999999999999999999986543211111
Q ss_pred cHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHh-cccC-CCchHHHHHHHHhcCChhhHHHHH
Q 011801 245 SVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKM-SSFG-LVSSQTQYLLASMLSDDEFVDNFL 322 (477)
Q Consensus 245 s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~-~~~~-~vs~~~q~~~~~~L~~~~~~~~~~ 322 (477)
+.... +..++++|||| +++|+|+||++++++ +.+.+++. .++. +++++.|.++..+|+... .
T Consensus 189 ~~~~~--------~~divv~s~SK--alaG~r~G~v~~~~~-li~~l~~~~~~~~~s~~~~~~~aa~~aL~~~~-----~ 252 (346)
T TIGR03576 189 PALDL--------GADLVVTSTDK--LMDGPRGGLLAGRKE-LVDKIKSVGEQFGLEAQAPLLAAVVRALEEFE-----L 252 (346)
T ss_pred CHHHc--------CCcEEEeccch--hccccceEEEEeCHH-HHHHHHHhhcCcccCccHHHHHHHHHHHhhcc-----H
Confidence 21111 12366789999 569999999999665 44555444 3333 257788888888886532 2
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEE
Q 011801 323 VETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFR 402 (477)
Q Consensus 323 ~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~R 402 (477)
+..++.++++++.+.+.+.. +.+.++.+| |+|++++.. +..+++..+++++||.|+||+.|. ..++|+|
T Consensus 253 ~~~~~~l~~r~~~~~~~l~~--~~~~~~~~~-f~~~~~~~~-------~~~~~~~~ll~~~gV~v~~~~~f~-~~~~~vR 321 (346)
T TIGR03576 253 SRIRDAFKRKEEVYLRLFDK--LNVERTPTG-FVIKGVEEE-------KLIEIGLDLLRNYGIITITAVGMP-GASKTLR 321 (346)
T ss_pred HHHHHHHHHHHHHHHHHHHh--CCCCcCCCe-EEEEeCCCC-------CHHHHHHHHHHhCCEEEeCCcccC-CCCCeEE
Confidence 44567888888888888874 445555555 899998741 112467788889999999999884 3478999
Q ss_pred EEeccCCHH---HHHHHHHHHHHHH
Q 011801 403 VCFANMDDD---TLQVALNRIAAFV 424 (477)
Q Consensus 403 l~~~~~~~e---~l~~~l~~l~~~~ 424 (477)
||++. +++ +++.+++.|++-+
T Consensus 322 is~~~-~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 322 FDLAA-KDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred EEEec-ChHHhcCHHHHHHHHHhcc
Confidence 99994 333 6999999887643
No 112
>PRK10534 L-threonine aldolase; Provisional
Probab=99.98 E-value=1.6e-30 Score=260.06 Aligned_cols=322 Identities=15% Similarity=0.188 Sum_probs=222.3
Q ss_pred ccccccccccccHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCC
Q 011801 40 VIQLGLAENQLCFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGG 119 (477)
Q Consensus 40 ~i~l~~~~n~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G 119 (477)
+|||+.|+|+.+++.+.+.+.+.. .....|.+..+..+|++++|++++ + +.+++++|
T Consensus 1 ~~~~~~~~~~~p~~~~~~a~~~~~-------------~~~~~Y~~~~~~~~L~~~la~~~g--------~--~~~~v~~~ 57 (333)
T PRK10534 1 MIDLRSDTVTRPSRAMLEAMMAAP-------------VGDDVYGDDPTVNALQDYAAELSG--------K--EAALFLPT 57 (333)
T ss_pred CcccccccCCCCCHHHHHHHHhcc-------------CCCcccCCCHHHHHHHHHHHHHhC--------C--CeEEEeCc
Confidence 489999999998888888776642 134568555578999999999987 2 34567888
Q ss_pred hHHHHHHHHHHhcCCCCeEEEcCCCccc-hHHH-HhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEE
Q 011801 120 ATGANELIMFCLANPGDAFLVPSPYYAA-FDRD-LSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLII 197 (477)
Q Consensus 120 ~t~al~~i~~~l~~~Gd~vlv~~P~y~~-~~~~-~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii 197 (477)
+++++.+++.+++++||.|+++.|+|.. +... .....++++++++++ .+|.+|+++|++++.+...+..++++|++
T Consensus 58 g~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~~~~~lv~l 135 (333)
T PRK10534 58 GTQANLVALLSHCERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAA--ADGTLPLDKVAAKIKPDDIHFARTRLLSL 135 (333)
T ss_pred hHHHHHHHHHHhcCCCCeeEEechhhhhHhcCCchHHhcCceEEeecCC--CCCCCCHHHHHHhhcccCcCcccceEEEE
Confidence 8888888888889999999999888753 3211 233313677777765 46889999999887531111125789999
Q ss_pred eCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCC--CcccHHHhhhhccCCCCcEEEEecCCcccCCCCc
Q 011801 198 TNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSP--KFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGF 275 (477)
Q Consensus 198 ~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~--~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~ 275 (477)
|||+ +|++++.+++++|+++|++++++||+||+|. |... ...+...+.. ..++++ .||||.+|++
T Consensus 136 ~np~--~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~---~~~~~~~~~~~~~~~~----~~~~~~--~s~SK~~~~~-- 202 (333)
T PRK10534 136 ENTH--NGKVLPREYLKQAWEFTRERNLALHVDGARI---FNAVVAYGCELKEITQ----YCDSFT--ICLSKGLGTP-- 202 (333)
T ss_pred ecCC--CCeecCHHHHHHHHHHHHHcCCeEEeeHHHH---HHHHHHcCCCHHHHHh----cCCEEE--EEeEcCCCCc--
Confidence 9776 5999999999999999999999999999986 3210 0122222221 123333 4899999865
Q ss_pred eEE-EEEeCCHHHHHHHHHhcccCC----CchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecC
Q 011801 276 RVG-IVYSFNDTVVNCGRKMSSFGL----VSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKS 350 (477)
Q Consensus 276 RvG-~i~~~~~~i~~~~~~~~~~~~----vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~ 350 (477)
+| |+++ ++.+.+.++++...+. .+.+.|.++...|++ . .+ ..++..+.++++.+.|++.|+++.++
T Consensus 203 -~G~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~--~----~~-~~~~~~~~r~~l~~~L~~~g~~~~~~ 273 (333)
T PRK10534 203 -VGSLLVG-NRDYIKRARRWRKMTGGGMRQAGILAAAGLYALKH--N----VA-RLQEDHDNAAWLAEQLREAGADVMRQ 273 (333)
T ss_pred -ccceEEc-CHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHh--h----HH-HHHHHHHHHHHHHHHHHhCCCccCCC
Confidence 78 5777 4455565555443321 223455555555532 1 11 22223445688999999999988877
Q ss_pred CceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEec-cCCHHHHHHHHHHHHHHHh
Q 011801 351 NAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFA-NMDDDTLQVALNRIAAFVQ 425 (477)
Q Consensus 351 ~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~-~~~~e~l~~~l~~l~~~~~ 425 (477)
+ ++|+|++++.. ...++. ..+.++||.|+||. ++|++.. ..+++++++++++|++++.
T Consensus 274 ~-~nfv~~~~~~~-------~~~~~~-~~l~~~gi~v~~~~--------~~rl~~~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 274 D-TNMLFVRVGEE-------QAAALG-EYMRERNVLINASP--------IVRLVTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred C-ceEEEEECCch-------hHHHHH-HHHHHcCeeecCCc--------eEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 4 68999998731 112344 56667799999873 4788764 2589999999999998875
No 113
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.97 E-value=2.4e-30 Score=238.54 Aligned_cols=375 Identities=18% Similarity=0.287 Sum_probs=257.6
Q ss_pred chhhhhhcCCCCCCCCCCccccccccccccccHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHH
Q 011801 20 FDGWKAFDRNPFHPTQNPGGVIQLGLAENQLCFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFM 99 (477)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~i~l~~~~n~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~ 99 (477)
+.|.-..-.|-...-+ ..|.|.+|-+ |+.-.+.+.+.....-. ... .+| ...+.+.+|..++|...|.+++++++
T Consensus 13 ~sGi~~lMdDl~d~Lr-t~g~imLggG-NPa~iPem~~~f~~~~a-eml-a~~-~~~e~~cnY~~pQG~~~li~ala~~l 87 (417)
T COG3977 13 HSGITQLMDDLNDGLR-TPGAIMLGGG-NPARIPEMDDYFQDLLA-EML-ASG-KATEALCNYDGPQGKAVLIDALAKML 87 (417)
T ss_pred hhhHHHHHHHHHhhcc-CCCceeeCCC-CcccChhHHHHHHHHHH-HHH-hcc-hHHHHHhcCCCCcchhHHHHHHHHHH
Confidence 3444444444333333 3467888755 56544444443332100 000 011 01245789999999999999999999
Q ss_pred hcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCC---C--CeEEEc-CCCccchHHHHhhhCCcEEEE----EeccCCC
Q 011801 100 GKGRGGRVTFDPDRIVMGGGATGANELIMFCLANP---G--DAFLVP-SPYYAAFDRDLSWRTGVQIVP----VHCDISN 169 (477)
Q Consensus 100 ~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~---G--d~vlv~-~P~y~~~~~~~~~~~g~~~~~----v~~~~~~ 169 (477)
++.+| ..+++.+|.+|+|++.+...++..|.+. | .+|++| .|.|.+|....- - +--++. +...+.+
T Consensus 88 ~~~yg--wnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l-~-~d~fVs~kP~iel~~~g 163 (417)
T COG3977 88 RREYG--WNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGL-E-EDLFVSAKPNIELLPAG 163 (417)
T ss_pred HHHhC--CCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhcccccccc-C-ccceeeccCCccccccc
Confidence 99988 4577999999999999999999888542 3 356666 789998875421 1 111111 1222233
Q ss_pred --CcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHH
Q 011801 170 --NFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVA 247 (477)
Q Consensus 170 --~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~ 247 (477)
.|.+|.++|+-. .++.+|+++-|.||||.+++.+|+.+|-.+|++||+.+|+|.+|+-- |.+--|..+.
T Consensus 164 ~FKY~vDF~~l~i~--------e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~P-FP~iifsd~~ 234 (417)
T COG3977 164 QFKYHVDFEHLHIG--------ESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVP-FPGIIFSDAT 234 (417)
T ss_pred ceeeccCHHHcccc--------cccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCC-CCceeccccc
Confidence 356677776542 37888999999999999999999999999999999999999999732 4332232222
Q ss_pred HhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhcccCC--CchHHHHHHHHhcCChhhHHHHHHHH
Q 011801 248 EVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGL--VSSQTQYLLASMLSDDEFVDNFLVET 325 (477)
Q Consensus 248 ~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~~~~~--vs~~~q~~~~~~L~~~~~~~~~~~~~ 325 (477)
-+ -.++++.+.|+|| +|+||.|+|++++ ++.+++.+..|....+ .+...+++++.|++.++..+---+-.
T Consensus 235 ~~------w~~NiilC~SLSK-~GLPG~R~GIiIa-ne~viqaitnmn~iisLap~~~G~Aia~~mie~gdl~rlseqVI 306 (417)
T COG3977 235 PL------WNENIILCMSLSK-LGLPGSRCGIIIA-NEKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQVI 306 (417)
T ss_pred cc------CCCCEEEEeehhh-cCCCCcceeEEEc-cHHHHHHHHhccceeeecCCCccHHHHHHHhhcchHHHHHHHhh
Confidence 22 2478899999999 7899999999999 6667777776654322 45588999999999888632111222
Q ss_pred HHHHHHHHHHHHHHHh----hCCCeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCC----
Q 011801 326 SKRLAKRHHNFTKGLE----QVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTE---- 397 (477)
Q Consensus 326 ~~~l~~r~~~l~~~L~----~~gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~---- 397 (477)
+--++++.+.....|+ +..+.+.++++..|+|+=+.++.-. .+++.+++ +++||++.||..|.+.-
T Consensus 307 rPFY~~~~q~~~~~l~~~lp~~~~~iHkpEGAIFlWLWf~dLPIt-----t~~LYq~L-Ka~Gvl~VPG~~FFpGl~~ew 380 (417)
T COG3977 307 RPFYRNRVQTTIAILRRYLPEYRCLIHKPEGAIFLWLWFKDLPIT-----TEELYQRL-KARGVLMVPGHYFFPGLDKEW 380 (417)
T ss_pred hHHHHHHHHHHHHHHHHhcCccceeeecCCcceeehhhhccCCCC-----HHHHHHHH-HhCeEEEecccccCCCCCCCC
Confidence 3445555555555554 4456677899999999877654322 23566655 56699999999997642
Q ss_pred ---CCEEEEEeccCCHHHHHHHHHHHHHHHhhh
Q 011801 398 ---PGWFRVCFANMDDDTLQVALNRIAAFVQQD 427 (477)
Q Consensus 398 ---~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~~ 427 (477)
..++|+++.. ++++++.++++|.+.+++.
T Consensus 381 pH~hqC~Rmn~~~-~~~~ie~Gva~lae~ve~~ 412 (417)
T COG3977 381 PHTHQCMRMNYVP-EPEKIEKGVAILAEEVERA 412 (417)
T ss_pred CCccceEEEecCC-CHHHHHHHHHHHHHHHHHH
Confidence 3489999985 8899999999999998763
No 114
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.97 E-value=1.5e-28 Score=250.52 Aligned_cols=316 Identities=17% Similarity=0.268 Sum_probs=232.2
Q ss_pred ccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEE
Q 011801 81 IFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQI 160 (477)
Q Consensus 81 ~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~ 160 (477)
.|.+..|.++|+++++++++ .+++++|+|+++|+.+++.++++|||.| +++|+|+.+...+... |.++
T Consensus 48 ~Y~~~~g~~~Leeaia~~~g----------~~~vv~t~~Gt~Al~la~~al~~pGD~V-~~~~~f~~~~~~i~~~-Ga~p 115 (431)
T cd00617 48 AYAGSKSFYDLEDAVQDLFG----------FKHIIPTHQGRGAENILFSILLKPGRTV-PSNMHFDTTRGHIEAN-GAVP 115 (431)
T ss_pred ccCCCCCHHHHHHHHHHHHC----------CCeEEEcCCHHHHHHHHHHHhCCCCCEE-ccCCcccchHHHHHhC-CCEe
Confidence 59999999999999999997 3579999999999999999999999977 6999999998888877 9999
Q ss_pred EEEeccCCCC------cc--cCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCc-ccCCCHHHHHHHHHHHHhcCeEEEecc
Q 011801 161 VPVHCDISNN------FK--ITREALEAAYERAQEASINIKGLIITNPSNPL-GTTLDRDTLKSLVSFINDKNIHLVCDE 231 (477)
Q Consensus 161 ~~v~~~~~~~------f~--i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPt-G~~~~~~~l~~l~~~~~~~~~~lI~De 231 (477)
+.++++...+ |+ +|+++|++++.+. ...++++|++++|+||+ |.+++.+++++|.++|+++|++||+|+
T Consensus 116 v~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~--~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~Da 193 (431)
T cd00617 116 VDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEV--GAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDA 193 (431)
T ss_pred EEEecccccccccccCCCCCcCHHHHHHHhCcc--cCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEc
Confidence 9999875433 44 9999999999741 01248899999999998 999999999999999999999999999
Q ss_pred cccc--ccc-----CCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCce------EEEEEeCCHHHHHHHHHhc---
Q 011801 232 IYAA--TVF-----SSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFR------VGIVYSFNDTVVNCGRKMS--- 295 (477)
Q Consensus 232 ~y~~--~~~-----~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~R------vG~i~~~~~~i~~~~~~~~--- 295 (477)
+... .+| ++....++.++. +.++|+||.+.+.|+| .||++++++.+.+.++...
T Consensus 194 Ar~~~na~~i~~r~~g~~~~si~ei~----------~e~~s~sd~~~mS~~K~~~~~~GG~i~~~d~~l~~~~~~~~~~~ 263 (431)
T cd00617 194 ARFAENAYFIKEREEGYRDKSIAEIA----------REMFSYADGCTMSAKKDGLVNIGGFLALRDDELYEEARQRVVLY 263 (431)
T ss_pred hhhHhhhhhhhcccccccCCCHHHHH----------HHhhccCCEEEEEeecCCCCccceEEEeCcHHHHHHHHHhcccc
Confidence 9541 123 122334554432 2355777777777766 5699997766666555321
Q ss_pred ----ccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchhhc---cC
Q 011801 296 ----SFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKE---KT 368 (477)
Q Consensus 296 ----~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~---~~ 368 (477)
.++..+.-...+++..|....- .+++ .++++ +++++.+.|.+.|+++..|.+|+|+|++.+..+.. ..
T Consensus 264 ~~~~~~gG~~~r~~~A~A~gL~e~~~-~~~l---~~~~~-~r~~l~~~L~~~G~~v~~P~Ggh~v~~d~~~~~~~~~~~~ 338 (431)
T cd00617 264 EGFVTYGGMAGRDMEALAQGLREAVE-EDYL---RHRVE-QVRYLGDRLDEAGVPIVEPAGGHAVFIDAREFLPHIPQEQ 338 (431)
T ss_pred CCccccccccHHHHHHHHHHHHhccc-HHHH---HHHHH-HHHHHHHHHHHCCCCccCCCcceEEEEEhHHhcCCCCccc
Confidence 1222233222333435533110 1222 33344 44899999999999999999999999999864321 12
Q ss_pred chHHHHHHHHHHHhcCeEEeC-CCCC-C--CC-------CCCEEEEEecc--CCHHHHHHHHHHHHHHHhh
Q 011801 369 LEGEIALWRTIVNDVKLNVSP-GSSF-Q--CT-------EPGWFRVCFAN--MDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 369 ~~~e~~l~~~ll~~~gI~v~p-g~~f-~--~~-------~~~~~Rl~~~~--~~~e~l~~~l~~l~~~~~~ 426 (477)
+ ...+++..++.+.||.+.. |+.. + +. ....+|+++.. .+.++++.+.++|..+.++
T Consensus 339 ~-~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~~ 408 (431)
T cd00617 339 F-PAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALYER 408 (431)
T ss_pred C-cHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEeccccccCHHHHHHHHHHHHHHHhh
Confidence 2 2447888999999999654 4421 1 11 12579999965 4999999999999999987
No 115
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.97 E-value=3.8e-28 Score=246.21 Aligned_cols=300 Identities=14% Similarity=0.189 Sum_probs=209.0
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccC
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDI 167 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~ 167 (477)
..++++++|+|++ .+.+++++|+++++..++.++.++||.|+++.+.|......++.. |++++.++.+.
T Consensus 53 ~~~~~e~lA~~~g----------~~~~~i~~g~~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~~~~~~~-g~~~~~~~~~~ 121 (370)
T TIGR02539 53 IHDFLEDLAEFLG----------MDEARVTHGAREGKFAVMHALCKEGDWVVLDGLAHYTSYVAAERA-GLNVKEVPHTG 121 (370)
T ss_pred HHHHHHHHHHHhC----------CCceEEECChHHHHHHHHHHhhCCCCEEEECCcccHHHHHHHHHc-CCEEEEEecCC
Confidence 4688999999987 245777999999999999999999999999988855555566655 99999999765
Q ss_pred CCCcccCHHHHHHHHHHHHHh-CCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccH
Q 011801 168 SNNFKITREALEAAYERAQEA-SINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSV 246 (477)
Q Consensus 168 ~~~f~i~~~~l~~~~~~~~~~-~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~ 246 (477)
+++|.+|+++|++++++.... ..++++|++++|+||||...+ +++|+++|+++|+++|+||+|+.. ..+ .+.
T Consensus 122 ~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~---l~~i~~la~~~~~~livDea~~~g---~~~-~~~ 194 (370)
T TIGR02539 122 HPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD---AGKVAKVCREKGVPLLLNCAYTVG---RMP-VSA 194 (370)
T ss_pred cccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC---HHHHHHHHHHcCCeEEEECccccC---CcC-CCH
Confidence 567899999999998753221 136789999999999999888 777888899999999999999842 111 121
Q ss_pred HHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhcccCCCch----------HHHHHHHHhcCChh
Q 011801 247 AEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSS----------QTQYLLASMLSDDE 316 (477)
Q Consensus 247 ~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~~~~~vs~----------~~q~~~~~~L~~~~ 316 (477)
. ..+..++++|+||++| +|.|+||++++++.+ +.++....++.++. ..+.++...+.+
T Consensus 195 ~--------~~~~di~v~s~sK~~~-~~g~~G~l~~~~~~i-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-- 262 (370)
T TIGR02539 195 K--------EIGADFIVGSGHKSMA-ASGPCGVLGMSEEWE-DIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPH-- 262 (370)
T ss_pred H--------HcCCCEEEeeCccccc-CCCCEEEEEECHHHH-hhhcccccCCccceeeeecccccccHHHHHHHHHHH--
Confidence 1 1133467799999998 677899999966544 44443332221211 134444444432
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEe--cCCceEEEEeeccchhh--ccCchHHHHHHHHHHHhcCeE-EeCCC
Q 011801 317 FVDNFLVETSKRLAKRHHNFTKGLEQVGINCL--KSNAGLFFWMDLRHLLK--EKTLEGEIALWRTIVNDVKLN-VSPGS 391 (477)
Q Consensus 317 ~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~--~~~~g~~~~~~l~~~~~--~~~~~~e~~l~~~ll~~~gI~-v~pg~ 391 (477)
. .+++++..+.++.+ +++.++|++.|+++. .+..++|++++++.... .........+.+.| .+.||. +++|
T Consensus 263 ~-~~~l~~~~~~~~~~-~~l~~~L~~~g~~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L-~e~GI~~ir~~- 338 (370)
T TIGR02539 263 V-VERVKRWDEEVKKT-RWFVAELEDIGFIQLGQKPKEHDLVKFETPGFHEIAQKHKRRGYFLYEEL-KKRGIHGIRSG- 338 (370)
T ss_pred H-HHHHHHHHHHHHHH-HHHHHHHHhCCcEEEccCCCcCceEEEECCchhHHhhhhccccHHHHHHH-HhCCCccccCC-
Confidence 1 23344444444444 589999999998763 24556899998863210 00001112344554 456997 6543
Q ss_pred CCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhh
Q 011801 392 SFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 392 ~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~ 426 (477)
.++++|+++...+++++++++++|++++++
T Consensus 339 -----~~~~iRis~~~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 339 -----QTKYFKLSVYGLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred -----cceEEEEEecCCCHHHHHHHHHHHHHHHHh
Confidence 256899998445999999999999998865
No 116
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.97 E-value=3.5e-28 Score=248.87 Aligned_cols=305 Identities=14% Similarity=0.112 Sum_probs=213.3
Q ss_pred CCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEe
Q 011801 85 YHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVH 164 (477)
Q Consensus 85 ~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~ 164 (477)
..|.+++++++++++.+..| . +++|++|+| ++++..++.++++|||.|++++|+|+.+...+... |.+++.++
T Consensus 82 ~~G~~~l~~~l~~~la~~~g----~-~~~i~~tsG-~~a~~~~~~~l~~~gd~vi~~~~~~~~~~~~~~~~-~~~~~~~~ 154 (397)
T PRK06939 82 ICGTQDLHKELEEKLAKFLG----T-EDAILYSSC-FDANGGLFETLLGKEDAIISDALNHASIIDGVRLC-KAKRYRYA 154 (397)
T ss_pred ccCCcHHHHHHHHHHHHHhC----C-CcEEEEcCh-HHHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHhc-CCceEEeC
Confidence 46888889888888887765 2 367888888 77899999999999999999999999998877766 88887776
Q ss_pred ccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcc
Q 011801 165 CDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFT 244 (477)
Q Consensus 165 ~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~ 244 (477)
. .|++++++.+++....+.++++|++.+.+||+|...+ +++|+++|++++++||+||+|+...+.... .
T Consensus 155 ~-------~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~---~~~l~~la~~~~~~li~De~~~~g~~~~~~-~ 223 (397)
T PRK06939 155 N-------NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAP---LPEICDLADKYDALVMVDDSHAVGFVGENG-R 223 (397)
T ss_pred C-------CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCC---HHHHHHHHHHhCCEEEEECcccccCcCCCC-C
Confidence 3 3788898888754333346777776667899998665 888999999999999999999632222211 1
Q ss_pred cHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHh-ccc--C-CCchHHHHHHHHhcCChhhHHH
Q 011801 245 SVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKM-SSF--G-LVSSQTQYLLASMLSDDEFVDN 320 (477)
Q Consensus 245 s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~-~~~--~-~vs~~~q~~~~~~L~~~~~~~~ 320 (477)
+...... ...+.+++++||||.++ |.|+||++++++.+ +.+... ..+ . ..++..+.++.+.++.. +.
T Consensus 224 ~~~~~~~---~~~~~~i~~~S~sK~~~--g~r~G~v~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~---~~ 294 (397)
T PRK06939 224 GTVEHFG---VMDRVDIITGTLGKALG--GASGGYTAGRKEVI-DWLRQRSRPYLFSNSLAPAIVAASIKVLELL---EE 294 (397)
T ss_pred CHHHHcC---CCCCCcEEEEECHHHhC--ccCceEEEeCHHHH-HHHHHhCccccccCCCCHHHHHHHHHHHHHH---hc
Confidence 1111111 12345688999999994 55999999965544 444332 221 1 12233344443434221 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCC--CCC
Q 011801 321 FLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQC--TEP 398 (477)
Q Consensus 321 ~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~--~~~ 398 (477)
..+.+++++++++.+.+.|++.|+++.++.++++ ++.++... ...++.+.++++ ||.+.++. |.. .+.
T Consensus 295 -~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~L~~~-gI~v~~~~-~~~~~~~~ 364 (397)
T PRK06939 295 -SDELRDRLWENARYFREGMTAAGFTLGPGEHPII-PVMLGDAK------LAQEFADRLLEE-GVYVIGFS-FPVVPKGQ 364 (397)
T ss_pred -CHHHHHHHHHHHHHHHHHHHHcCCCcCCCCCCEE-EEEECCHH------HHHHHHHHHHHC-CceEeeeC-CCCCCCCC
Confidence 2456778889999999999998887766666554 44444321 123577777776 99998643 432 234
Q ss_pred CEEEEEecc-CCHHHHHHHHHHHHHHHhh
Q 011801 399 GWFRVCFAN-MDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 399 ~~~Rl~~~~-~~~e~l~~~l~~l~~~~~~ 426 (477)
+++|++++. .+++++++++++|++++++
T Consensus 365 ~~iRi~~~~~~~~~~i~~~l~~L~~~~~~ 393 (397)
T PRK06939 365 ARIRTQMSAAHTKEQLDRAIDAFEKVGKE 393 (397)
T ss_pred ceEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 689999976 5899999999999999876
No 117
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.97 E-value=6.4e-28 Score=246.75 Aligned_cols=297 Identities=15% Similarity=0.164 Sum_probs=209.8
Q ss_pred HHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCC
Q 011801 89 PEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDIS 168 (477)
Q Consensus 89 ~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~ 168 (477)
.++++++|++++ .+++++++|+++|+..++.+++++||.|+++.|+|+.+...++.. +.+.+.+.
T Consensus 86 ~~le~~ia~~~g----------~~~~ii~~~~~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~~~-~~~~~~~~---- 150 (393)
T TIGR01822 86 KELEAKIAAFLG----------TEDTILYASCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLC-KAKRYRYA---- 150 (393)
T ss_pred HHHHHHHHHHhC----------CCcEEEECchHHHHHHHHHHhCCCCCEEEEeccccHHHHHHHHhc-CCceEEeC----
Confidence 899999999987 246788889999999999999999999999999999988877665 66655443
Q ss_pred CCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHH
Q 011801 169 NNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAE 248 (477)
Q Consensus 169 ~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~ 248 (477)
.+|++++++++++..+.+.++++|++.+++||||.+.+ +++|+++|+++|++||+||+|+.. +.+....+...
T Consensus 151 ---~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~---l~~i~~la~~~~~~li~De~~~~g-~~~~~~~~~~~ 223 (393)
T TIGR01822 151 ---NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAP---LDEICDLADKYDALVMVDECHATG-FLGPTGRGSHE 223 (393)
T ss_pred ---CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCC---HHHHHHHHHHcCCEEEEECCcccc-CcCCCCCchHH
Confidence 26889999999865333447888888889999999988 888999999999999999999632 22222223222
Q ss_pred hhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHh-ccc--C-CCchHHHHHHHHhcCChhhHHHHHHH
Q 011801 249 VIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKM-SSF--G-LVSSQTQYLLASMLSDDEFVDNFLVE 324 (477)
Q Consensus 249 ~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~-~~~--~-~vs~~~q~~~~~~L~~~~~~~~~~~~ 324 (477)
... ...+.+++++|+||.+ +|+|+||++++++ +.+.++.. ..+ . +.++..+.++...+. +.+ ..++
T Consensus 224 ~~~---~~~~~di~~~s~sK~l--~g~r~G~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~---~~~-~~~~ 293 (393)
T TIGR01822 224 LCG---VMGRVDIITGTLGKAL--GGASGGFTTARKE-VVELLRQRSRPYLFSNSLPPAVVGASIKVLE---MLE-ASNE 293 (393)
T ss_pred hcC---CCCCCeEEEEEChHHh--hCCCcEEEEeCHH-HHHHHHHhCccceecCCCCHHHHHHHHHHHH---HHh-cCHH
Confidence 221 0224568899999987 4789999998654 44444332 222 1 123333334444442 211 2355
Q ss_pred HHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCC--CCCCEEE
Q 011801 325 TSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQC--TEPGWFR 402 (477)
Q Consensus 325 ~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~--~~~~~~R 402 (477)
.+++++++++++.+.|++.|+++.++.+. ++++.+++.. ...++.+.++++ ||.+. +..|.. .+..++|
T Consensus 294 ~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-~~~i~~~~~~------~~~~l~~~L~~~-gI~v~-~~~~~~~~~~~~~iR 364 (393)
T TIGR01822 294 LRDRLWANTRYFRERMEAAGFDIKPADHP-IIPVMLYDAV------LAQRFARRLLEE-GIYVT-GFFYPVVPKGQARIR 364 (393)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCCCC-EEEEEeCCHH------HHHHHHHHHHHC-CeeEe-eeCCCCCCCCCceEE
Confidence 67888999999999999888877655443 5555554321 123577777765 99997 555532 2335799
Q ss_pred EEeccC-CHHHHHHHHHHHHHHHhh
Q 011801 403 VCFANM-DDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 403 l~~~~~-~~e~l~~~l~~l~~~~~~ 426 (477)
++++.. +++++++++++|++++++
T Consensus 365 is~~~~~t~edi~~~~~~l~~~~~~ 389 (393)
T TIGR01822 365 VQISAAHTEEQLDRAVEAFTRIGRE 389 (393)
T ss_pred EEECCCCCHHHHHHHHHHHHHHHHH
Confidence 998765 899999999999998764
No 118
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.97 E-value=3.2e-28 Score=245.64 Aligned_cols=293 Identities=14% Similarity=0.115 Sum_probs=207.0
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccC
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDI 167 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~ 167 (477)
..+++++++++++ .++.|++++|+++ +..++.+++++||.|+++.|+|+.+...++.. |.+++.++.
T Consensus 63 ~~~l~~~la~~~~---------~~~~i~~~~G~~~-~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~-g~~~~~~~~-- 129 (360)
T TIGR00858 63 HEELEEELAEWKG---------TEAALLFSSGYLA-NVGVISALVGKGDLILSDALNHASLIDGCRLS-GARVRRYRH-- 129 (360)
T ss_pred HHHHHHHHHHHhC---------CCCEEEECchHHH-HHHHHHHhCCCCCEEEEEccccHHHHHHHHhc-CCceEEecC--
Confidence 4568888888875 2567888888655 44567788899999999999999998888776 998887763
Q ss_pred CCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHH
Q 011801 168 SNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVA 247 (477)
Q Consensus 168 ~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~ 247 (477)
+|++++++.+++. .+.++++|++++++||||...+ +++|.++|+++|++||+||+|+...++... .+..
T Consensus 130 -----~d~~~l~~~~~~~--~~~~~~~v~~~~~~~~~G~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~-~~~~ 198 (360)
T TIGR00858 130 -----NDVEHLERLLEKN--RGERRKLIVTDGVFSMDGDIAP---LPQLVALAERYGAWLMVDDAHGTGVLGEDG-RGTL 198 (360)
T ss_pred -----CCHHHHHHHHHHc--ccCCCeEEEEeCCccCCCCCcC---HHHHHHHHHHcCcEEEEECcccccCcCCCC-CchH
Confidence 4788898888642 1135678888899999999888 788888999999999999999854444321 2222
Q ss_pred HhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhccc--C-CCchHHHHHHHHhcCChhhHHHHHHH
Q 011801 248 EVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSF--G-LVSSQTQYLLASMLSDDEFVDNFLVE 324 (477)
Q Consensus 248 ~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~~~--~-~vs~~~q~~~~~~L~~~~~~~~~~~~ 324 (477)
.... .. ..+++++++||||.||++| ||++++++.+.........+ . ..++..+.++.+.++... ...+
T Consensus 199 ~~~~-~~-~~~~~i~i~s~sK~~~~~g---G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~----~~~~ 269 (360)
T TIGR00858 199 EHFG-LK-PEPVDIQVGTLSKALGSYG---AYVAGSQALIDYLINRARTLIFSTALPPAVAAAALAALELIQ----EEPW 269 (360)
T ss_pred HhcC-CC-ccCCcEEEEechhhhhccC---cEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHh----hCHH
Confidence 2211 00 2367889999999999777 99998654433322222222 1 233444445555553221 1345
Q ss_pred HHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCC-CCCCEEEE
Q 011801 325 TSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQC-TEPGWFRV 403 (477)
Q Consensus 325 ~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~-~~~~~~Rl 403 (477)
.+++++++++++.+.|++.++.+.++ +++++|+.++... ...++++.+. ++||.+.++..+.. .+++++||
T Consensus 270 ~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~------~~~~~~~~l~-~~gI~v~~~~~~~~~~~~~~iRi 341 (360)
T TIGR00858 270 RREKLLALIARLRAGLEALGFTLMPS-CTPIVPVIIGDNA------SALALAEELQ-QQGIFVGAIRPPTVPAGTSRLRL 341 (360)
T ss_pred HHHHHHHHHHHHHHHHHHcCCccCCC-CCCEEEEEeCCHH------HHHHHHHHHH-HCCeeEeeeCCCCCCCCCceEEE
Confidence 67889999999999999988876644 5679999987421 1235667665 45999998766542 23568999
Q ss_pred Eecc-CCHHHHHHHHHHHH
Q 011801 404 CFAN-MDDDTLQVALNRIA 421 (477)
Q Consensus 404 ~~~~-~~~e~l~~~l~~l~ 421 (477)
+++. .+++++++++++|+
T Consensus 342 s~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 342 TLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred EEcCCCCHHHHHHHHHhhC
Confidence 9985 38999999999874
No 119
>PLN02721 threonine aldolase
Probab=99.97 E-value=8.6e-28 Score=242.08 Aligned_cols=335 Identities=15% Similarity=0.193 Sum_probs=219.2
Q ss_pred ccccccccccccccHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEe
Q 011801 38 GGVIQLGLAENQLCFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMG 117 (477)
Q Consensus 38 ~~~i~l~~~~n~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t 117 (477)
..+|+|+.++++.+.+.+.+.++.... .....|.++ ...+|++++|++++. +.++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~a~~~~~~------------~~~~~~~~~-~~~~l~~~la~~~~~----------~~~~~~ 61 (353)
T PLN02721 5 SRVVDLRSDTVTKPTDAMRAAMANAEV------------DDDVLGYDP-TALRLEEEMAKIFGK----------EAALFV 61 (353)
T ss_pred hhhhhhhcccccCCCHHHHHHHHhccC------------CCcccCCCH-HHHHHHHHHHHHhCC----------ceeEEe
Confidence 357899999999888888777765310 111223222 368999999999972 234555
Q ss_pred CChHHHHHHHHHHhcC-CCCeEEEcCCCccchHH---HHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhC-CCe
Q 011801 118 GGATGANELIMFCLAN-PGDAFLVPSPYYAAFDR---DLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEAS-INI 192 (477)
Q Consensus 118 ~G~t~al~~i~~~l~~-~Gd~vlv~~P~y~~~~~---~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~-~~~ 192 (477)
+++++++..++.++++ +||.|++++|+|..... .+... |++++.++.+ .++.+|++++++++++....+ .++
T Consensus 62 ~~Gs~a~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~-g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~~~ 138 (353)
T PLN02721 62 PSGTMGNLISVLVHCDVRGSEVILGDNSHIHLYENGGISTLG-GVHPRTVKNN--EDGTMDLDAIEAAIRPKGDDHFPTT 138 (353)
T ss_pred cCccHHHHHHHHHHccCCCCeEEEcCccceehhcccchhhhc-CceeEecCCC--cCCCcCHHHHHHHHHhccCCCCCcc
Confidence 5556667777777777 99999999999864443 34545 9999998875 356789999999987421111 378
Q ss_pred eEEEEeCC-CCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccC
Q 011801 193 KGLIITNP-SNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMG 271 (477)
Q Consensus 193 k~vii~nP-~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g 271 (477)
++|+++++ +||||.+++.+++++|+++|+++|+++|+||+|....+.... .+...... ..+ .++.|+||.++
T Consensus 139 ~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~-~~~~~~~~----~~d--~~~~s~sK~l~ 211 (353)
T PLN02721 139 RLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALG-VPVHRLVK----AAD--SVSVCLSKGLG 211 (353)
T ss_pred eEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhC-CCHHHHhh----hCC--EEEEecccccC
Confidence 89999875 789999999999999999999999999999998621111011 22222222 223 34558999987
Q ss_pred CCCceEEE-EEeCCHHHHHHHHHhcc-cC-CCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeE
Q 011801 272 LPGFRVGI-VYSFNDTVVNCGRKMSS-FG-LVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINC 347 (477)
Q Consensus 272 ~~G~RvG~-i~~~~~~i~~~~~~~~~-~~-~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~ 347 (477)
. ++|+ +++ ++.+...+..... +. ..+...+.+++.+..- +.+.++. ++..++++.+.+.|++. ++.+
T Consensus 212 ~---~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~-~~~~~~~~~l~~~L~~~~~~~~ 282 (353)
T PLN02721 212 A---PVGSVIVG-SKSFIRKAKRLRKTLGGGMRQVGVLAAAALVAL----QENVPKL-EDDHKKAKLLAEGLNQIKGLRV 282 (353)
T ss_pred C---ceeeEEec-CHHHHHhHHHHHHhcCCCeehhHHHHHHHHHHH----HHHHHHH-HHHHHHHHHHHHHHHhCCCcEE
Confidence 3 3676 455 4445444433332 21 1222222222222211 2223332 23355678899999887 6754
Q ss_pred -ecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEec-cCCHHHHHHHHHHHHHHHh
Q 011801 348 -LKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFA-NMDDDTLQVALNRIAAFVQ 425 (477)
Q Consensus 348 -~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~-~~~~e~l~~~l~~l~~~~~ 425 (477)
..+..++|+|++++.... .. ..++.+.+. ++||.++|+. ++++|++++ ..+++++++++++|++++.
T Consensus 283 ~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~L~-~~gi~v~~~~------~~~lR~~~~~~~~~~~i~~~~~~l~~~~~ 351 (353)
T PLN02721 283 NVAAVETNIVYFDITDGSR---IT-AEKLCKSLE-EHGVLLMPGN------SSRIRVVTHHQISDSDVQYTLSCFQQAAL 351 (353)
T ss_pred ecCCccceEEEEEccCCcc---cc-HHHHHHHHH-hCCcEEecCC------CceEEEEecCcCCHHHHHHHHHHHHHHhh
Confidence 333334679999874210 11 124666665 6799999974 468999997 4599999999999998875
No 120
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.96 E-value=9.6e-28 Score=240.28 Aligned_cols=300 Identities=17% Similarity=0.181 Sum_probs=207.2
Q ss_pred ccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHH---HHhhhCC
Q 011801 81 IFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDR---DLSWRTG 157 (477)
Q Consensus 81 ~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~---~~~~~~g 157 (477)
.|.+..+..++++.++++++ ++++++++|+++++..++.+++++||.|+++.|+|..+.. ..... |
T Consensus 27 ~~~~~~~~~~l~~~~a~~~g----------~~~~~~~~~gt~a~~~~~~~l~~~gd~v~~~~~~~~~~~~~~~~~~~~-g 95 (338)
T cd06502 27 VYGEDPTTAKLEARAAELFG----------KEAALFVPSGTAANQLALAAHTQPGGSVICHETAHIYTDEAGAPEFLS-G 95 (338)
T ss_pred ccCCCHHHHHHHHHHHHHhC----------CCeEEEecCchHHHHHHHHHhcCCCCeEEEecCcceeeecCCcHHHHc-C
Confidence 45555567889999988875 4568888888899999999999999999999999875432 23334 9
Q ss_pred cEEEEEeccCCCCcccCHHHHHHHHHHHHH-hCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEeccccccc
Q 011801 158 VQIVPVHCDISNNFKITREALEAAYERAQE-ASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAAT 236 (477)
Q Consensus 158 ~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~-~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~ 236 (477)
++++.++.+ .+.+|++++++++++..+ ...++++|+++||+|| |.+++.+++++|+++|+++|+++|+||+|...
T Consensus 96 ~~~~~v~~~---~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~~~~~~~~~~livDea~~~~ 171 (338)
T cd06502 96 VKLLPVPGE---NGKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAISALAKENGLPLHLDGARLAN 171 (338)
T ss_pred ceEEeecCC---CCcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHHHHHHHHcCCeEeechHHHHH
Confidence 999988864 267999999998864211 1136889999999998 77779999999999999999999999998532
Q ss_pred ccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhc-cc---CCCchHHHHHHHHhc
Q 011801 237 VFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMS-SF---GLVSSQTQYLLASML 312 (477)
Q Consensus 237 ~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~-~~---~~vs~~~q~~~~~~L 312 (477)
...... .++..... ..+ +++.|+||.+|+|| |+++..++.+.+.++... .+ ..+++.++.++...|
T Consensus 172 ~~~~~~-~~~~~~~~----~~d--~~~~s~sK~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~L 241 (338)
T cd06502 172 AAAALG-VALKTYKS----GVD--SVSFCLSKGGGAPV---GAVVVGNRDFIARARRRRKQAGGGMRQSGFLAAAGLAAL 241 (338)
T ss_pred HHHhcC-CCHHHHHh----cCC--EEEEeccccCCCcc---ceEEECCHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHh
Confidence 111111 13222211 223 46789999999887 554433544555444432 22 124567778888888
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchhhccCchHHHHHHHHHH--HhcCeEEeCC
Q 011801 313 SDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIV--NDVKLNVSPG 390 (477)
Q Consensus 313 ~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll--~~~gI~v~pg 390 (477)
++..+ .+..+++.+.++++.+.|++.|+.+.++.++ |+.++++.. .. .-..+.+.+. .+.|+.+.+.
T Consensus 242 ~~~~~-----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~v~~~~~---~~--~~~~l~~~l~~~~~~gi~~~~~ 310 (338)
T cd06502 242 ENDLW-----LRRLRHDHEMARRLAEALEELGGLESEVQTN-IVLLDPVEA---NA--VFVELSKEAIERRGEGVLFYAW 310 (338)
T ss_pred cCchH-----HHHHHHHHHHHHHHHHHHHhcCCCcccccCC-eEEEecCCc---cH--HHHHHHHHHHHhhhCCEEEEec
Confidence 76543 2333566666788999999988876666654 666666521 10 0012222222 2569998764
Q ss_pred CCCCCCCCCEEEEEeccC-CHHHHHHHHHHHHH
Q 011801 391 SSFQCTEPGWFRVCFANM-DDDTLQVALNRIAA 422 (477)
Q Consensus 391 ~~f~~~~~~~~Rl~~~~~-~~e~l~~~l~~l~~ 422 (477)
. .+++|++++.. ++++++++++++++
T Consensus 311 ~------~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 311 G------EGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred C------CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 2 26899999865 89999999999865
No 121
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=8e-28 Score=230.71 Aligned_cols=347 Identities=18% Similarity=0.261 Sum_probs=255.3
Q ss_pred CCCCCCCcccccccccc--cccc----HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccC
Q 011801 31 FHPTQNPGGVIQLGLAE--NQLC----FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRG 104 (477)
Q Consensus 31 ~~~~~~~~~~i~l~~~~--n~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g 104 (477)
|..+.+|+. |+|+++. |... ++-++++-+.-.. -.....|-+..|++++++++++.+- |
T Consensus 20 f~~D~R~~K-VNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~-----------~~~~k~Yl~i~G~~~f~~~~~~llF---G 84 (396)
T COG1448 20 FKADPRPNK-VNLGIGVYKDEDGKTPVLRAVKKAEKRLLE-----------QEKTKNYLPIEGLPEFLEAVQKLLF---G 84 (396)
T ss_pred HhcCCCcCe-eeeeeeeeeCCCCCcchhHHHHHHHHHhhc-----------cccccccCCcCCcHHHHHHHHHHhc---C
Confidence 555677766 9998874 3332 2333333332211 1234579999999999999999974 2
Q ss_pred CCCc-cCCCcEE--EeCChHHHHHHHHHHhc--CCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHH
Q 011801 105 GRVT-FDPDRIV--MGGGATGANELIMFCLA--NPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALE 179 (477)
Q Consensus 105 ~~~~-~~~~~i~--~t~G~t~al~~i~~~l~--~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~ 179 (477)
...+ ++.++|. =|.|+|+|+.+....+. .|..+|.+++|+|+.+...+... |.++..+|+....+-.+|.+.+.
T Consensus 85 ~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~a-Gl~v~~Y~Yyd~~~~~~df~~ml 163 (396)
T COG1448 85 ADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAA-GLEVETYPYYDAETKGLDFDGML 163 (396)
T ss_pred CCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhc-CCceeeeeccccccccccHHHHH
Confidence 1110 2334443 38899999999987763 46677999999999999988877 99999999866566679999999
Q ss_pred HHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCC---CcccHHHhhhhccCC
Q 011801 180 AAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSP---KFTSVAEVIQEMDCN 256 (477)
Q Consensus 180 ~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~---~~~s~~~~~~~~~~~ 256 (477)
+.++++++. .-+++-.++|||||.-++.++|++|+++.++++.+.+.|-+|.++ +.. .-..+..++. .
T Consensus 164 a~L~~a~~~---~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF--~~GleeDa~~lR~~a~----~ 234 (396)
T COG1448 164 ADLKTAPEG---SVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGF--ADGLEEDAYALRLFAE----V 234 (396)
T ss_pred HHHHhCCCC---CEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhh--ccchHHHHHHHHHHHH----h
Confidence 999876432 223344567999999999999999999999999999999999974 432 1122222232 2
Q ss_pred CCcEEEEecCCcccCCCCceEEEE--EeCCHHHHHHH----H--HhcccCCCchHHHHHHHHhcCChhhHHH---HHHHH
Q 011801 257 RDLIHIIYSLSKDMGLPGFRVGIV--YSFNDTVVNCG----R--KMSSFGLVSSQTQYLLASMLSDDEFVDN---FLVET 325 (477)
Q Consensus 257 ~~~viiv~SlSK~~g~~G~RvG~i--~~~~~~i~~~~----~--~~~~~~~vs~~~q~~~~~~L~~~~~~~~---~~~~~ 325 (477)
..-+++..||||.||+.|-|+|.+ ++.+....... . .++.|.+++.-...+++.+|+++++... .+..+
T Consensus 235 ~~~~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~M 314 (396)
T COG1448 235 GPELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEM 314 (396)
T ss_pred CCcEEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 233788999999999999999985 45554433221 1 1245565666788899999999876444 45567
Q ss_pred HHHHHHHHHHHHHHHhhC----CCeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEE
Q 011801 326 SKRLAKRHHNFTKGLEQV----GINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWF 401 (477)
Q Consensus 326 ~~~l~~r~~~l~~~L~~~----gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~ 401 (477)
+.|+.+.|..|.+.|++. .+.+...+.|+|.+..+.. +-+.++.+++||.+... |
T Consensus 315 r~Ri~~mR~~lv~~L~~~~~~~~f~~i~~Q~GMFsy~Gls~-----------~QV~rLree~~IY~v~s--------G-- 373 (396)
T COG1448 315 RQRILEMRQALVDALKALGAPRNFDFIISQRGMFSYTGLSP-----------EQVDRLREEFGIYLVAS--------G-- 373 (396)
T ss_pred HHHHHHHHHHHHHHHHhhCCCcccchHhhcCceeecCCCCH-----------HHHHHHHHhccEEEecC--------C--
Confidence 899999999999999984 4778889999999886663 34677889999998642 2
Q ss_pred EEEeccCCHHHHHHHHHHHHHH
Q 011801 402 RVCFANMDDDTLQVALNRIAAF 423 (477)
Q Consensus 402 Rl~~~~~~~e~l~~~l~~l~~~ 423 (477)
|+|++.+++..++.+.++|.++
T Consensus 374 Ri~vaGl~~~ni~~va~ai~~v 395 (396)
T COG1448 374 RINVAGLNTSNIDYVAKAIAAV 395 (396)
T ss_pred eeeeccCChhhHHHHHHHHHhh
Confidence 9999999999999999998875
No 122
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.96 E-value=1.4e-27 Score=244.84 Aligned_cols=294 Identities=16% Similarity=0.194 Sum_probs=212.4
Q ss_pred cHHHHHHHHHHHhcccCCCCcc-CCCcEEEeCChHHHHHHHHHHh----cCCCCeEEEcCCCccc----hHHHHhhhCCc
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTF-DPDRIVMGGGATGANELIMFCL----ANPGDAFLVPSPYYAA----FDRDLSWRTGV 158 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~-~~~~i~~t~G~t~al~~i~~~l----~~~Gd~vlv~~P~y~~----~~~~~~~~~g~ 158 (477)
+.++|+++|++++ . ++++|++|+|+|+++.+++.++ .++||.|++++|.|++ +...++.. |+
T Consensus 65 ~~~~r~~la~~~g--------~~~~~~i~~~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~-g~ 135 (401)
T PRK10874 65 YEAAREQVAQLLN--------APDAKNIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQT-GA 135 (401)
T ss_pred HHHHHHHHHHHcC--------CCCCCEEEEECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHh-CC
Confidence 6789999999987 3 6889999999999999999987 3789999999999865 34445555 99
Q ss_pred EEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEeccccccccc
Q 011801 159 QIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVF 238 (477)
Q Consensus 159 ~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~ 238 (477)
+++.++.+. ++.+|++++++++.+ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|+...+
T Consensus 136 ~v~~v~~~~--~~~~d~~~l~~~i~~------~t~lv~i~~~~n~tG~~~~---~~~i~~l~~~~g~~~ivD~a~~~g~~ 204 (401)
T PRK10874 136 KVVKLPLGA--DRLPDVDLLPELITP------RTRILALGQMSNVTGGCPD---LARAITLAHQAGMVVMVDGAQGAVHF 204 (401)
T ss_pred EEEEEecCC--CCcCCHHHHHHhcCc------CcEEEEEeCCcccccCcCC---HHHHHHHHHHcCCEEEEECCcccccc
Confidence 999999863 567899999998854 7899999999999999998 77888889999999999999973212
Q ss_pred CCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhc---------------------c-
Q 011801 239 SSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMS---------------------S- 296 (477)
Q Consensus 239 ~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~---------------------~- 296 (477)
+ ..+.. .+..+++.|++|.+|.+| +||++++++.+.. +.... .
T Consensus 205 ---~-~~~~~--------~~~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (401)
T PRK10874 205 ---P-ADVQA--------LDIDFYAFSGHKLYGPTG--IGVLYGKSELLEA-MSPWQGGGKMLTEVSFDGFTPQSAPWRF 269 (401)
T ss_pred ---c-CCchh--------cCCCEEEEecccccCCCc--cEEEEEchHHHhc-CCCeecCCcceEeeccCccCCCCChhhc
Confidence 1 22221 134477899999998777 6999986554332 22110 0
Q ss_pred -cCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEecCCceEEEEeeccchhhccCchHHHH
Q 011801 297 -FGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLKSNAGLFFWMDLRHLLKEKTLEGEIA 374 (477)
Q Consensus 297 -~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~ 374 (477)
.++.+...+.++...+..-. +.-..+..+++++.++++.+.|+++ |+.+..+..+.++++.++.. .. .+
T Consensus 270 e~Gt~~~~~~~al~~al~~l~--~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~i~~~~~~~~------~~-~~ 340 (401)
T PRK10874 270 EAGTPNVAGVIGLSAALEWLA--DIDINQAESWSRSLATLAEDALAKLPGFRSFRCQDSSLLAFDFAGV------HH-SD 340 (401)
T ss_pred cCCCcCHHHHHHHHHHHHHHH--HhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCcEEEEEECCc------CH-HH
Confidence 12234344555544443111 1112345667777778888899887 88777555555667676531 11 13
Q ss_pred HHHHHHHhcCeEEeCCCCCCC------CCCCEEEEEeccC-CHHHHHHHHHHHHHHHhh
Q 011801 375 LWRTIVNDVKLNVSPGSSFQC------TEPGWFRVCFANM-DDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 375 l~~~ll~~~gI~v~pg~~f~~------~~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~~ 426 (477)
+.+ .+.++||.+++|..|.. ...+++|+|++.. ++++++.+++.|+++++.
T Consensus 341 ~~~-~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid~ll~al~~~~~~ 398 (401)
T PRK10874 341 LVT-LLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDALVNAVDRALEL 398 (401)
T ss_pred HHH-HHHHCCcEEeccccchHHHHHHhCCCCEEEEEecccCCHHHHHHHHHHHHHHHHH
Confidence 444 44567999999987642 2357999999875 899999999999998865
No 123
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.96 E-value=2.4e-27 Score=242.92 Aligned_cols=292 Identities=17% Similarity=0.203 Sum_probs=208.8
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHh----cCCCCeEEEcCCCccc----hHHHHhhhCCcE
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCL----ANPGDAFLVPSPYYAA----FDRDLSWRTGVQ 159 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l----~~~Gd~vlv~~P~y~~----~~~~~~~~~g~~ 159 (477)
+.++|+++|++++. -++++|++|+|+|+++.+++.++ .++||.|++++|.|++ +...++.. |++
T Consensus 62 ~~~~r~~la~~~g~-------~~~~~i~~t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~-g~~ 133 (398)
T TIGR03392 62 YELARQQVARFLNA-------PDAENIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQT-GAK 133 (398)
T ss_pred HHHHHHHHHHHhCC-------CCCCeEEEeCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHc-CcE
Confidence 56799999999872 14789999999999999999887 4789999999999876 33444555 999
Q ss_pred EEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccC
Q 011801 160 IVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFS 239 (477)
Q Consensus 160 ~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~ 239 (477)
++.++++. ++.+|++++++++.+ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|+...+
T Consensus 134 v~~v~~~~--~~~~~~~~l~~~i~~------~t~lv~i~~~~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~~~~- 201 (398)
T TIGR03392 134 VVKLPIGA--DLLPDIRQLPELLTP------RTRILALGQMSNVTGGCPD---LARAITLAHQYGAVVVVDGAQGVVHG- 201 (398)
T ss_pred EEEEecCC--CCCcCHHHHHHHhcc------CceEEEEECccccccccCC---HHHHHHHHHHcCCEEEEEhhhhcCCC-
Confidence 99999864 467899999998854 7899999999999999998 77888999999999999999973211
Q ss_pred CCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhc---------------------c--
Q 011801 240 SPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMS---------------------S-- 296 (477)
Q Consensus 240 ~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~---------------------~-- 296 (477)
+ ..+.. .+..+++.|++|.+|.+| +||++.+++.+. .+.... .
T Consensus 202 --~-~~~~~--------~~~d~~~~s~~K~~gp~G--~G~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 267 (398)
T TIGR03392 202 --P-PDVQA--------LDIDFYAFSGHKLYGPTG--IGVLYGKTELLE-AMPPWQGGGKMLSHVSFDGFIPQAVPHRFE 267 (398)
T ss_pred --C-CChhh--------cCCCEEEEecccccCCCc--eEEEEEcHHHHh-hCCCeecCCceEeeccccccccCCChhhcc
Confidence 1 22221 133467788899998665 999998665432 221110 0
Q ss_pred cCCCchHHHHHHHHhc---CChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEecCCceEEEEeeccchhhccCchHH
Q 011801 297 FGLVSSQTQYLLASML---SDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLKSNAGLFFWMDLRHLLKEKTLEGE 372 (477)
Q Consensus 297 ~~~vs~~~q~~~~~~L---~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~~~~g~~~~~~l~~~~~~~~~~~e 372 (477)
.++.+.....++...+ .+.+ +++..++..+.++.+.+.|.++ |+.+..+..+.++++.++.. . .
T Consensus 268 ~GT~~~~~~~a~~~al~~l~~~g-----~~~i~~~~~~l~~~l~~~l~~l~g~~~~~~~~~~i~~~~~~~~-~-----~- 335 (398)
T TIGR03392 268 AGTPNIAGVIGLSAALEWLTDID-----IAAAEAWSVSLADLAEERLAQLPGFRSFRCPGSSLLAFDFAGV-H-----H- 335 (398)
T ss_pred CCCCCHHHHHHHHHHHHHHHHhC-----HHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCcEEEEEeCCc-C-----H-
Confidence 1223333333333333 2222 2345566677778888888876 77766544455677766531 1 1
Q ss_pred HHHHHHHHHhcCeEEeCCCCCCC------CCCCEEEEEeccC-CHHHHHHHHHHHHHHHhh
Q 011801 373 IALWRTIVNDVKLNVSPGSSFQC------TEPGWFRVCFANM-DDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 373 ~~l~~~ll~~~gI~v~pg~~f~~------~~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~~ 426 (477)
.++.+.+ .++||.|++|+.|.. ..++++|+|++.. ++++++.+++.|++++++
T Consensus 336 ~~l~~~L-~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei~~l~~~l~~~~~~ 395 (398)
T TIGR03392 336 SDLAALL-AESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDVDALVDAVGAALEL 395 (398)
T ss_pred HHHHHHH-HhCCEEEecCccchHHHHHHhCCCCEEEEEeeccCCHHHHHHHHHHHHHHHHH
Confidence 1355554 567999999987642 1257999999775 899999999999998875
No 124
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.96 E-value=3.4e-27 Score=240.66 Aligned_cols=341 Identities=14% Similarity=0.130 Sum_probs=232.3
Q ss_pred Cccccccccccc-cc-cHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcE
Q 011801 37 PGGVIQLGLAEN-QL-CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRI 114 (477)
Q Consensus 37 ~~~~i~l~~~~n-~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i 114 (477)
..++|||+.+.. .+ +.+.+.+.+.+.-.. .+ .....|....|.+++++++++++.+..| .++.|
T Consensus 32 g~~~id~~~~~~~g~~~~~~~~~a~~~~~~~-----~~----~~~~~~~~~~g~~~l~~~l~~~l~~~~g-----~~~~i 97 (385)
T TIGR01825 32 GKEVINLSSNNYLGFADHPRLKEAAAQAIQQ-----YG----VGAGAVRTIAGTLRLHEELEEKLAKFKK-----TEAAL 97 (385)
T ss_pred CceEEEeeccCccCCCCCHHHHHHHHHHHHH-----cC----CCCCccCcccCCcHHHHHHHHHHHHHhC-----CCcEE
Confidence 467899987642 23 344454544432100 00 0123566778999999999999988765 24568
Q ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeE
Q 011801 115 VMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKG 194 (477)
Q Consensus 115 ~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~ 194 (477)
++++| ++++..++.+++++||.|+++.|+|+.+...+... |.++..++ .+|++++++.+++.. ..++++
T Consensus 98 ~~~sG-~~a~~~a~~~~~~~gd~vi~~~~~~~~~~~~~~~~-g~~~~~~~-------~~d~~~l~~~l~~~~--~~~~~~ 166 (385)
T TIGR01825 98 VFQSG-FNTNQGVLSALLRKGDIVLSDELNHASIIDGLRLT-KATKKIYK-------HADMDDLDRVLRENP--SYGKKL 166 (385)
T ss_pred EECcH-HHHHHHHHHHhCCCCCEEEEEccccHHHHHHHHhc-CCceEEeC-------CCCHHHHHHHHHhhc--cCCCeE
Confidence 88888 55677888889999999999999999887766655 88776654 367888888876532 236788
Q ss_pred EEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCC
Q 011801 195 LIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPG 274 (477)
Q Consensus 195 vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G 274 (477)
|++++++||||.+.+ +++|.++|+++|+++|+||+|+...++........ ... ...+.+++++||||.+|++|
T Consensus 167 v~~~~v~~~tG~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~-~~~---~~~~~~i~~~s~sK~~~~~g 239 (385)
T TIGR01825 167 IVTDGVFSMDGDVAP---LPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVH-HFG---LEDKVDIQVGTLSKAIGVVG 239 (385)
T ss_pred EEEecCCcCCCCccC---HHHHHHHHHHhCCEEEEECcccccCcCCCCCccHh-hcC---CCcCCcEEEEeccHHhhcCC
Confidence 888888999999988 78899999999999999999986555422211111 111 13467899999999998776
Q ss_pred ceEEEEEeCCHHHHHHHHHh-ccc--CC-CchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecC
Q 011801 275 FRVGIVYSFNDTVVNCGRKM-SSF--GL-VSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKS 350 (477)
Q Consensus 275 ~RvG~i~~~~~~i~~~~~~~-~~~--~~-vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~ 350 (477)
||++++++ +.+.+... ..+ +. .++..|.++.+.++... +. .+..+++.++++++.+.|.+.|+++..+
T Consensus 240 ---G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~---~~-~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 311 (385)
T TIGR01825 240 ---GYAAGHKE-LIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQ---RS-PELMERLWDNTRFFKAGLGKLGYDTGGS 311 (385)
T ss_pred ---CEEecCHH-HHHHHHHhCccccccCCCCHHHHHHHHHHHHHHh---cC-HHHHHHHHHHHHHHHHHHHHcCCCCCCC
Confidence 99988554 44444332 222 22 34456666666664321 11 2345566778899999999989888776
Q ss_pred CceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCC--CCCCEEEEEecc-CCHHHHHHHHHHHHHHHhh
Q 011801 351 NAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQC--TEPGWFRVCFAN-MDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 351 ~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~--~~~~~~Rl~~~~-~~~e~l~~~l~~l~~~~~~ 426 (477)
.+. ++++.++... ...++++.++++ ||.+. +..|.. .+.+++|++++. .+++++++++++|++++++
T Consensus 312 ~~~-~~~~~~~~~~------~~~~~~~~L~~~-gi~v~-~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~ 381 (385)
T TIGR01825 312 ETP-ITPVVIGDEK------AAQEFSRRLFDE-GIFAQ-SIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVGKE 381 (385)
T ss_pred CCC-EEEEEECCHH------HHHHHHHHHHHC-CcEEc-ccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 654 5555554211 122577777776 99984 444542 234689998854 4999999999999999865
No 125
>PLN02822 serine palmitoyltransferase
Probab=99.96 E-value=3.8e-27 Score=245.37 Aligned_cols=313 Identities=14% Similarity=0.172 Sum_probs=225.2
Q ss_pred ccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEE
Q 011801 81 IFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQI 160 (477)
Q Consensus 81 ~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~ 160 (477)
.|.+..++.+|++++|++++ .++.|++++|.+ ++..++.+++++||.|++...+|..+...+... |.++
T Consensus 149 ~yg~~~~~~~Lee~La~~~~---------~~~~i~~s~G~~-a~~sai~a~~~~gd~Ii~d~~~H~s~~~~~~ls-~~~~ 217 (481)
T PLN02822 149 FYGTIDVHLDCETKIAKFLG---------TPDSILYSYGLS-TIFSVIPAFCKKGDIIVADEGVHWGIQNGLYLS-RSTI 217 (481)
T ss_pred cccCHHHHHHHHHHHHHHhC---------CCCEEEECCHHH-HHHHHHHHhCCCCCEEEEeCCccHHHHHHHHHc-CCeE
Confidence 36666778999999999997 367899998877 678899999999999998887777776666665 8888
Q ss_pred EEEeccCCCCcccCHHHHHHHHHHHHHh---CCCe-eEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEeccccccc
Q 011801 161 VPVHCDISNNFKITREALEAAYERAQEA---SINI-KGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAAT 236 (477)
Q Consensus 161 ~~v~~~~~~~f~i~~~~l~~~~~~~~~~---~~~~-k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~ 236 (477)
+.++.+ |.+.++..+++..+. ..++ ++|++..++|++|.+.+ +++|+++|++||+++|+||+|+..
T Consensus 218 ~~~~~n-------d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~---L~~i~~l~~k~~~~LIvDEa~s~g 287 (481)
T PLN02822 218 VYFKHN-------DMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAP---LDEIVRLKEKYRFRVLLDESNSFG 287 (481)
T ss_pred EEECCC-------CHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCcccc
Confidence 888754 456666666544322 1345 67788888999999999 888999999999999999999855
Q ss_pred ccCCCCcccHHHhhhhccC-CCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhc---ccC-CCchHHHHHHHHh
Q 011801 237 VFSSPKFTSVAEVIQEMDC-NRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMS---SFG-LVSSQTQYLLASM 311 (477)
Q Consensus 237 ~~~~~~~~s~~~~~~~~~~-~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~---~~~-~vs~~~q~~~~~~ 311 (477)
+++... ..+.+... . ..+..++++||||.+|++| ||++++++ +.+..+... .|+ ..+++.|.++...
T Consensus 288 vlG~~G-~G~~e~~~---v~~~~~dii~~s~sKalg~~G---G~i~g~~~-ii~~~~~~~~~~~fsa~lPp~~~~Aa~~a 359 (481)
T PLN02822 288 VLGKSG-RGLSEHFG---VPIEKIDIITAAMGHALATEG---GFCTGSAR-VVDHQRLSSSGYVFSASLPPYLASAAITA 359 (481)
T ss_pred ccCCCC-CChHHHcC---CCCCCCeEEEecchhhhhhCC---eEEEcCHH-HHHHHHhcCCceeeccccCHHHHHHHHHH
Confidence 565322 22333221 1 1245688999999999999 99998655 444444322 222 1235566666666
Q ss_pred cCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEecCCceEEEEeeccchhhc--cCchHHHHHHHHHHHhcCeEEe
Q 011801 312 LSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLKSNAGLFFWMDLRHLLKE--KTLEGEIALWRTIVNDVKLNVS 388 (477)
Q Consensus 312 L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~~~~g~~~~~~l~~~~~~--~~~~~e~~l~~~ll~~~gI~v~ 388 (477)
|+.. +. ..+.+++++++++++.+.|.+. |+++..+.+++++++.++..... .+.....++++.+++++||.+.
T Consensus 360 L~~l---~~-~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~ 435 (481)
T PLN02822 360 IDVL---ED-NPSVLAKLKENIALLHKGLSDIPGLSIGSNTLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVV 435 (481)
T ss_pred HHHH---Hh-CHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEE
Confidence 6321 22 2456788999999999999987 88887777889999998642110 0001124688888878899999
Q ss_pred CC--CCCCCC-CCCEEEEEecc-CCHHHHHHHHHHHHHHHhh
Q 011801 389 PG--SSFQCT-EPGWFRVCFAN-MDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 389 pg--~~f~~~-~~~~~Rl~~~~-~~~e~l~~~l~~l~~~~~~ 426 (477)
|+ ..|... .+.++|++++. .+++++++++++|++++.+
T Consensus 436 ~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~~~~ 477 (481)
T PLN02822 436 VSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKRVAAS 477 (481)
T ss_pred eeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 77 444321 24589999865 4999999999999998865
No 126
>PLN02483 serine palmitoyltransferase
Probab=99.96 E-value=1.2e-26 Score=242.25 Aligned_cols=343 Identities=18% Similarity=0.218 Sum_probs=230.6
Q ss_pred Cccccccccc------cc-cccHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCcc
Q 011801 37 PGGVIQLGLA------EN-QLCFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTF 109 (477)
Q Consensus 37 ~~~~i~l~~~------~n-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~ 109 (477)
...+|+|+++ .+ +.+.+.+.+.+.+..... | ..-..|+...+..++++++|+|++
T Consensus 99 ~~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~-~--------~sr~~~g~~~~~~ele~~lA~~~g--------- 160 (489)
T PLN02483 99 TRRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSAST-C--------SSRVDGGTTKLHRELEELVARFVG--------- 160 (489)
T ss_pred CceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCC-C--------ccccccCCcHHHHHHHHHHHHHhC---------
Confidence 4556777654 22 223456666666642110 0 112347767788999999999997
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHh-
Q 011801 110 DPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEA- 188 (477)
Q Consensus 110 ~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~- 188 (477)
.++.|++++| ..++..++.+++++||.|++++|+|+.+...++.. |++++.++.+ |.+++++.+++....
T Consensus 161 ~~~ai~~~~G-~~an~~~i~al~~~Gd~Vi~d~~~h~s~~~~~~~~-Ga~v~~~~~~-------d~~~le~~l~~~i~~~ 231 (489)
T PLN02483 161 KPAAIVFGMG-YATNSTIIPALIGKGGLIISDSLNHNSIVNGARGS-GATIRVFQHN-------TPSHLEEVLREQIAEG 231 (489)
T ss_pred CCcEEEECCH-HHHHHHHHHHhCCCCCEEEEcchhhHHHHHHHHHc-CCeEEEEeCC-------CHHHHHHHHHhhhhcc
Confidence 2567777776 45566778889999999999999999999888877 9999998843 467777777643211
Q ss_pred -----CCCeeEEEEeCC-CCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEE
Q 011801 189 -----SINIKGLIITNP-SNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHI 262 (477)
Q Consensus 189 -----~~~~k~vii~nP-~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~vii 262 (477)
.+..+.++++++ .|++|.+.+ +++|+++|+++|++||+||+|+...+ ++......+...- + ..+.+++
T Consensus 232 ~p~t~~p~~k~livve~v~s~~G~~~~---l~~I~~la~~~~~~livDEa~s~g~~-G~~G~g~~~~~~v-~-~~~~dI~ 305 (489)
T PLN02483 232 QPRTHRPWKKIIVIVEGIYSMEGELCK---LPEIVAVCKKYKAYVYLDEAHSIGAV-GKTGRGVCELLGV-D-PADVDIM 305 (489)
T ss_pred ccccccCCceEEEEECCCCCCCCcccC---HHHHHHHHHHcCCEEEEECcCccCcc-CCCCCchHHhcCC-C-cccCcEE
Confidence 122366666666 599999988 88899999999999999999984323 2221222222210 0 1356789
Q ss_pred EecCCcccCCCCceEEEEEeCCHHHHHHHHHhc-c--cC-CCc-hHHHHHHHHh---cCChhhHHHHHHHHHHHHHHHHH
Q 011801 263 IYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMS-S--FG-LVS-SQTQYLLASM---LSDDEFVDNFLVETSKRLAKRHH 334 (477)
Q Consensus 263 v~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~-~--~~-~vs-~~~q~~~~~~---L~~~~~~~~~~~~~~~~l~~r~~ 334 (477)
++||||++|++| ||++++++ +.+.++... . ++ ..+ ...|.+++++ +.+.. .+...+.+++++++++
T Consensus 306 ~~SfSKs~g~~G---G~i~~~~~-li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g--~~~~~~~~~~l~~~~~ 379 (489)
T PLN02483 306 MGTFTKSFGSCG---GYIAGSKE-LIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDG--TNRGAQKLAQIRENSN 379 (489)
T ss_pred EEecchhcccCc---eEEEcCHH-HHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCcc--ccchHHHHHHHHHHHH
Confidence 999999999887 99998554 555554432 1 22 122 3444433222 21211 1223455678999999
Q ss_pred HHHHHHhhCCCeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCC--CCCCCEEEEEecc-CCHH
Q 011801 335 NFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQ--CTEPGWFRVCFAN-MDDD 411 (477)
Q Consensus 335 ~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~--~~~~~~~Rl~~~~-~~~e 411 (477)
++.+.|++.|+.+..+.++..+|+.+....+ ..++++.+++ +||.+.| ..|. +...+++|+|++. .++|
T Consensus 380 ~l~~~L~~~G~~v~~~~~sp~~~l~l~~~~~------~~~~~~~Ll~-~GI~v~~-~~fp~~p~~~~~vRi~isa~~t~e 451 (489)
T PLN02483 380 FFRSELQKMGFEVLGDNDSPVMPIMLYNPAK------IPAFSRECLK-QNVAVVV-VGFPATPLLLARARICISASHSRE 451 (489)
T ss_pred HHHHHHHHCCCcccCCCCCCEEEEEECCHHH------HHHHHHHHHH-CCcEEee-eCCCCCCCCCceEEEEeCCCCCHH
Confidence 9999999999887766666677776543221 1247777775 5999997 4553 2334789999976 4999
Q ss_pred HHHHHHHHHHHHHhh
Q 011801 412 TLQVALNRIAAFVQQ 426 (477)
Q Consensus 412 ~l~~~l~~l~~~~~~ 426 (477)
++++++++|+++++.
T Consensus 452 dId~~l~~L~~~~~~ 466 (489)
T PLN02483 452 DLIKALEVISEVGDL 466 (489)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998865
No 127
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.96 E-value=9e-27 Score=238.99 Aligned_cols=347 Identities=14% Similarity=0.120 Sum_probs=228.3
Q ss_pred ccccccccccccHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCC
Q 011801 40 VIQLGLAENQLCFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGG 119 (477)
Q Consensus 40 ~i~l~~~~n~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G 119 (477)
.|+|.-++|.+++. +.+.+...... .+ ..| ......|....+.+++++.+++++.+..| .+...|++++
T Consensus 21 ~~~~~~~~~~~~~~-v~~a~~~~~~~-~~-~~g---~~~~~~~~~~~~~~~l~~~~~~~~~~~~g----~~~~~v~~~s- 89 (402)
T cd00378 21 TLELIASENFTSPA-VMEAMGSDLTN-KY-AEG---YPGKRYYGGCEYVDEIEDLAIERAKKLFG----AEYANVQPHS- 89 (402)
T ss_pred CeeeeccCCcCCHH-HHHHhcccccc-cc-cCC---CCCCcccCCchHHHHHHHHHHHHHHHHhC----CCceeeecCC-
Confidence 57787777777554 44444332100 00 001 01123465666778888877777666555 3445566555
Q ss_pred hHHHHHHHHHHhcCCCCeEEEcCCCccchHHH-----HhhhCCcEEEEEeccCC-CCcccCHHHHHHHHHHHHHhCCCee
Q 011801 120 ATGANELIMFCLANPGDAFLVPSPYYAAFDRD-----LSWRTGVQIVPVHCDIS-NNFKITREALEAAYERAQEASINIK 193 (477)
Q Consensus 120 ~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~-----~~~~~g~~~~~v~~~~~-~~f~i~~~~l~~~~~~~~~~~~~~k 193 (477)
+++|+.+++.++.+|||.|+++.|+|+++... ++.. |.++..++++.+ +++.+|++++++++.+. +++
T Consensus 90 gt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~id~~~l~~~i~~~-----~~~ 163 (402)
T cd00378 90 GSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSAS-GKLFESVPYGVDPETGLIDYDALEKMALEF-----KPK 163 (402)
T ss_pred cHHHHHHHHHHhcCCCCEEEEecCccCcccccccccccccc-ceeEEEecCCcCcccCCcCHHHHHHHHHhC-----CCC
Confidence 57999999999999999999999999876433 4444 877777776543 26899999999998642 688
Q ss_pred EEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccc-cccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCC
Q 011801 194 GLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIY-AATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGL 272 (477)
Q Consensus 194 ~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y-~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~ 272 (477)
+|++++|+||+ ..+ +++|+++|+++|+++|+|++| .++.+.+.....+. ...++++|+||.+
T Consensus 164 ~v~~~~~~~~~--~~~---~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~----------~~dv~~~s~sK~l-- 226 (402)
T cd00378 164 LIVAGASAYPR--PID---FKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP----------GADVVTTTTHKTL-- 226 (402)
T ss_pred EEEecCcccCC--CcC---HHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc----------CCcEEEeccccCC--
Confidence 89999998864 334 888999999999999999995 44434332111111 1126789999987
Q ss_pred CCceEEEEEeCCHHHHHHHHHhcc-cCC-Cch-HHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEe-
Q 011801 273 PGFRVGIVYSFNDTVVNCGRKMSS-FGL-VSS-QTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCL- 348 (477)
Q Consensus 273 ~G~RvG~i~~~~~~i~~~~~~~~~-~~~-vs~-~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~- 348 (477)
+|.|.||++++++.+.+.+.+... +.. .+. ..+.++...+.. ..+....+.+++++++++.+.+.|.+.|+.+.
T Consensus 227 ~G~~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~--~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 304 (402)
T cd00378 227 RGPRGGLILTRKGELAKKINSAVFPGLQGGPHLHVIAAKAVALKE--ALEPEFKAYAKQVVENAKALAEALKERGFKVVS 304 (402)
T ss_pred CCCCceEEEeccHHHHHHHHHHhCccccCCchHHHHHHHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEee
Confidence 889999999977455555543322 211 121 222222222221 11223456677889999999999999998876
Q ss_pred cCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCC----CCCCCCCEEEEEeccC-----CHHHHHHHHHH
Q 011801 349 KSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSS----FQCTEPGWFRVCFANM-----DDDTLQVALNR 419 (477)
Q Consensus 349 ~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~----f~~~~~~~~Rl~~~~~-----~~e~l~~~l~~ 419 (477)
.+.+++++|++++.... .. +.+..+++++||.+.++.. ++...+.++|+++... ++++++.+++.
T Consensus 305 ~~~~~~~v~v~~~~~~~----~~--~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~ 378 (402)
T cd00378 305 GGTDNHLVLVDLRPKGI----TG--KAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADF 378 (402)
T ss_pred cCCCCeEEEEeCCccCC----CH--HHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHH
Confidence 45678999999984211 11 2334567788999986432 1111346899999653 58999999999
Q ss_pred HHHHHhhhh
Q 011801 420 IAAFVQQDK 428 (477)
Q Consensus 420 l~~~~~~~~ 428 (477)
|++++++..
T Consensus 379 l~~~~~~~~ 387 (402)
T cd00378 379 IARALKDAE 387 (402)
T ss_pred HHHHHhccc
Confidence 999887643
No 128
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.96 E-value=1.4e-26 Score=222.57 Aligned_cols=321 Identities=19% Similarity=0.299 Sum_probs=215.2
Q ss_pred ccccc-CCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHH-H-HHHHHh----cC--------CCCeEEEcC
Q 011801 78 DIAIF-QDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGAN-E-LIMFCL----AN--------PGDAFLVPS 142 (477)
Q Consensus 78 ~~~~Y-~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al-~-~i~~~l----~~--------~Gd~vlv~~ 142 (477)
+..+| +...|+++.|+-.|+.++ +++++|++.+.++--+ + ++.+++ .+ +.-++|+|.
T Consensus 60 D~RNY~G~l~Gipe~r~l~a~llg--------v~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPv 131 (425)
T PF12897_consen 60 DCRNYPGGLDGIPEARELFAELLG--------VPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPV 131 (425)
T ss_dssp BTTSS-S-SS--HHHHHHHHHHHT--------S-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEE
T ss_pred cccCCCCccCChHHHHHHHHHHhC--------CCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecC
Confidence 56799 889999999999999998 7899999977655333 2 222332 11 124799999
Q ss_pred CCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCC--CCCcccCCCHHHHHHHHHH-
Q 011801 143 PYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNP--SNPLGTTLDRDTLKSLVSF- 219 (477)
Q Consensus 143 P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP--~NPtG~~~~~~~l~~l~~~- 219 (477)
|.|......++.. |++.++||+++++ +|.+.+++.+.+ ++.+|+++. .| +||||.++|.|..++++++
T Consensus 132 PGYDRHFai~E~~-Giemi~VpM~~dG---PDmD~Ve~LV~~----D~svKGiWc-VP~ySNPtG~tySde~vrrlA~m~ 202 (425)
T PF12897_consen 132 PGYDRHFAITEHF-GIEMIPVPMTEDG---PDMDMVEELVAE----DPSVKGIWC-VPKYSNPTGITYSDEVVRRLAAMK 202 (425)
T ss_dssp S--HHHHHHHHHC-T-EEEEEEEETTE---E-HHHHHHHTHT----STTEEEEEE--SSS-TTT-----HHHHHHHHHS-
T ss_pred CCchHHHHHHHhh-CcEEEecCCCCCC---CCHHHHHHHHhc----CCccceEEe-CCCccCCCCccCCHHHHHHHhcCC
Confidence 9999999999988 9999999998654 899999998764 568998654 45 8999999999999999997
Q ss_pred HHhcCeEEEeccccccccc-CCCC---cccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhc
Q 011801 220 INDKNIHLVCDEIYAATVF-SSPK---FTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMS 295 (477)
Q Consensus 220 ~~~~~~~lI~De~y~~~~~-~~~~---~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~ 295 (477)
....+..|+.|++|+-..+ +... ...+.+...+.| ++++++...|+||.- +||-+|+++.++.+.+....+.+.
T Consensus 203 ~AA~DFRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~AG-npdrv~~F~STSKIT-f~GaGva~~aaS~~Nl~~~~~~~~ 280 (425)
T PF12897_consen 203 TAAPDFRIFWDNAYAVHHLYDEEPRDALLNILDACAKAG-NPDRVYVFASTSKIT-FPGAGVAFFAASEANLAWIKKHLS 280 (425)
T ss_dssp -SSTT-EEEEE-TTTT-BSSSSSS------HHHHHHHTT--TTSEEEEEESTTTS--TTSS-EEEEE-HHHHHHHHHHHH
T ss_pred cCCcCeEEEeecCceEeeccccccchhhhHHHHHHHHcC-CCCeEEEEecccccc-cCCcceeeeecCHHHHHHHHHHhc
Confidence 4468999999999986545 2222 124555544433 789999999999987 699999999998887766655543
Q ss_pred ccC-CCchHHHHHHHHhcCChh-hHHHHHHHHHHHHHHHHHHHHHHHhhC-----CC-eEecCCceEEEEeeccchhhcc
Q 011801 296 SFG-LVSSQTQYLLASMLSDDE-FVDNFLVETSKRLAKRHHNFTKGLEQV-----GI-NCLKSNAGLFFWMDLRHLLKEK 367 (477)
Q Consensus 296 ~~~-~vs~~~q~~~~~~L~~~~-~~~~~~~~~~~~l~~r~~~l~~~L~~~-----gi-~~~~~~~g~~~~~~l~~~~~~~ 367 (477)
.-. ...-+.|..-..++.|.+ -++.++++.++.|+-+.+.+.+.|++. |+ +|..|.||+|++++..++..
T Consensus 281 ~~tIgpdKvNQLRHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~G~A-- 358 (425)
T PF12897_consen 281 VQTIGPDKVNQLRHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLDGTA-- 358 (425)
T ss_dssp HH-S---HHHHHHHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEESTT-H--
T ss_pred CceeCccHHHHHHHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCCChH--
Confidence 222 245589999999999976 668899999999988888777777653 34 78899999999999986533
Q ss_pred CchHHHHHHHHHHHhcCeEEeC-CCCCCCC---CCCEEEEEeccCCHHHHHHHHHHHHHHHh
Q 011801 368 TLEGEIALWRTIVNDVKLNVSP-GSSFQCT---EPGWFRVCFANMDDDTLQVALNRIAAFVQ 425 (477)
Q Consensus 368 ~~~~e~~l~~~ll~~~gI~v~p-g~~f~~~---~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~ 425 (477)
...-.+.++.||.+.| |+.|... .+..|||+.+..+.++++.+++.+.-+++
T Consensus 359 ------krvV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS~P~leel~~Am~~~~~cv~ 414 (425)
T PF12897_consen 359 ------KRVVELAKEAGVALTPAGATFPYGKDPRDSNIRIAPSYPSLEELETAMDVFATCVK 414 (425)
T ss_dssp ------HHHHHHHHHTTEE---TTTTSGGG--TTS-EEEE--SSS-HHHHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 2344567788999999 7776532 24589999998899999999999988775
No 129
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.96 E-value=1.6e-26 Score=233.78 Aligned_cols=299 Identities=14% Similarity=0.173 Sum_probs=204.9
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccC
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDI 167 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~ 167 (477)
..++++++|++++ + +++++|+|+++++.+++.+++++||.|+++.++|......++.. |++++.++++.
T Consensus 46 ~~~l~~~la~~~g--------~--~~i~~~~g~t~al~~~l~~~~~~gd~Vl~~~~~~~~~~~~~~~~-g~~~~~v~~~~ 114 (361)
T cd06452 46 IKDFHHDLAEFLG--------M--DEARVTPGAREGKFAVMHSLCEKGDWVVVDGLAHYTSYVAAERA-GLNVREVPNTG 114 (361)
T ss_pred HHHHHHHHHHHcC--------C--ceEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCcchHHHHHHHhc-CCEEEEEecCC
Confidence 5799999999986 2 78999999999999999999999999999999877666666666 99999999876
Q ss_pred CCCcccCHHHHHHHHHHHHHh-CCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccH
Q 011801 168 SNNFKITREALEAAYERAQEA-SINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSV 246 (477)
Q Consensus 168 ~~~f~i~~~~l~~~~~~~~~~-~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~ 246 (477)
.++|.+|++++++++++..+. +.++++|++++|+||||...+ +++|+++|+++|+++|+|++|+. ...++ +.
T Consensus 115 ~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~---~~~i~~~~~~~~~~vivD~a~~~---g~~~~-~~ 187 (361)
T cd06452 115 HPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHD---AKKIAKVCHEYGVPLLLNGAYTV---GRMPV-SG 187 (361)
T ss_pred CCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeecc---HHHHHHHHHHcCCeEEEECCccc---CCcCC-CH
Confidence 556899999999998753221 237899999999999999877 78888899999999999999972 22221 22
Q ss_pred HHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhcccCCCch----------HHHHHHHHhcCChh
Q 011801 247 AEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSS----------QTQYLLASMLSDDE 316 (477)
Q Consensus 247 ~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~~~~~vs~----------~~q~~~~~~L~~~~ 316 (477)
.+ .+..++++|+||.++ +|.|+||++++++.+ +.+.+...++.++. ..+..+...+.
T Consensus 188 ~~--------~~~d~~~~s~~K~l~-~~~~~G~l~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~--- 254 (361)
T cd06452 188 KE--------LGADFIVGSGHKSMA-ASAPIGVLATTEEWA-DIVFRTSQMFKIKEVELLGCTLRGAPLVTLMASFP--- 254 (361)
T ss_pred HH--------cCCCEEEecCCcccc-CCCCeEEEEECHHHH-HHHhccccccccceeeeeccccCchHHHHHHHHHH---
Confidence 11 244588999999998 566999999965544 44433322211111 11222222221
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEec--CCceEEEEeeccchhhcc--CchHHHHHHHHHHHhcCeEEeCCC
Q 011801 317 FVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLK--SNAGLFFWMDLRHLLKEK--TLEGEIALWRTIVNDVKLNVSPGS 391 (477)
Q Consensus 317 ~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~--~~~g~~~~~~l~~~~~~~--~~~~e~~l~~~ll~~~gI~v~pg~ 391 (477)
+..++++...+. .++.+++.+.|+++ |+++.. +...+|+.++.+...... ......++.+.+.+ +||.+..
T Consensus 255 ~~~~~~~~~~~~-~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~~-~gI~~~~-- 330 (361)
T cd06452 255 HVKERVKRWDEE-VEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETPSFDEIAKKHKRRGYFLYSELKK-RGIHGIK-- 330 (361)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcCCcchhhhhccccchhHHHHHHH-cCceEEc--
Confidence 112233333333 33447888999998 888762 233456667665211100 00001136666654 5998532
Q ss_pred CCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHH
Q 011801 392 SFQCTEPGWFRVCFANMDDDTLQVALNRIAAFV 424 (477)
Q Consensus 392 ~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~ 424 (477)
....+++|++....++++++.+++.|+++.
T Consensus 331 ---~~~~~~~ri~~~g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 331 ---PGLTRYFKLSTYGLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred ---CCCceEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 123458999994458999999999998764
No 130
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.96 E-value=1.4e-26 Score=237.17 Aligned_cols=339 Identities=14% Similarity=0.139 Sum_probs=219.2
Q ss_pred CCCCccccccccc--cccccH--HHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCcc
Q 011801 34 TQNPGGVIQLGLA--ENQLCF--DLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTF 109 (477)
Q Consensus 34 ~~~~~~~i~l~~~--~n~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~ 109 (477)
+.+.+..||+..+ .+.+++ +.+.+.+.+.-. ... +....+..++++++++++.+..+
T Consensus 35 d~dg~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~-------------~~~-~~~~~~~~~~~~~la~~l~~~~~----- 95 (396)
T PRK02627 35 DDDGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAA-------------KLI-HTSNLYYIEPQEELAEKLVELSG----- 95 (396)
T ss_pred eCCCCEEEECCccHHhccCCCCCHHHHHHHHHHHh-------------hcc-ccccccCCHHHHHHHHHHHhhcC-----
Confidence 4456678898664 344543 556666555311 010 00111236788888888876543
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCC-------CeEEEcCCCccchHHHHhhhCCcEEEEEeccC-CCCc----ccCHHH
Q 011801 110 DPDRIVMGGGATGANELIMFCLANPG-------DAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDI-SNNF----KITREA 177 (477)
Q Consensus 110 ~~~~i~~t~G~t~al~~i~~~l~~~G-------d~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~-~~~f----~i~~~~ 177 (477)
.+++++++|+++|++.+++.+...+ +.|++..++|.++........+.........+ ..++ ..|+++
T Consensus 96 -~~~v~~~~gg~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 174 (396)
T PRK02627 96 -MDKVFFCNSGAEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPFNDIEA 174 (396)
T ss_pred -CCEEEECCCcHHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeCCCCHHH
Confidence 5799999999999999998764333 67999999998876554333232221111110 0111 127888
Q ss_pred HHHHHHHHHHhCCCeeEEEEeCCCCCcc-cCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCC
Q 011801 178 LEAAYERAQEASINIKGLIITNPSNPLG-TTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCN 256 (477)
Q Consensus 178 l~~~~~~~~~~~~~~k~vii~nP~NPtG-~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~ 256 (477)
+++++.+ ++++|+++.++||+| .+++.+.+++|.++|+++|+++|+||+|.++.+.+.. .+.... . ..
T Consensus 175 l~~~i~~------~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~-~~~~~~-~---~~ 243 (396)
T PRK02627 175 LKAAITD------KTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKL-FAYQHY-G---IE 243 (396)
T ss_pred HHHhcCC------CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCce-eeehhc-C---CC
Confidence 8888742 789999988899999 6889999999999999999999999999986554432 222111 1 12
Q ss_pred CCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHH--hcccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHH
Q 011801 257 RDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRK--MSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHH 334 (477)
Q Consensus 257 ~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~--~~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~ 334 (477)
++ +.||||.+| +|+|+||++++++ +.+.+.. .......++++|.++.+.|+..+. +++.++.++.....++
T Consensus 244 pd----i~t~sK~~~-~G~rig~~~~~~~-~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~-~~~~~~~~~~~~~~~~ 316 (396)
T PRK02627 244 PD----IMTLAKGLG-GGVPIGAVLAKEK-VADVFTPGDHGSTFGGNPLACAAALAVIEIIEE-EGLLENAAEVGEYLRA 316 (396)
T ss_pred CC----EEEEcchhh-CCcccEEEEEcHH-HHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHH
Confidence 22 337999999 9999999999655 4444432 222234788899998888864321 2223333333333333
Q ss_pred HHHHHHhhCC-CeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEec-cCCHHH
Q 011801 335 NFTKGLEQVG-INCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFA-NMDDDT 412 (477)
Q Consensus 335 ~l~~~L~~~g-i~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~-~~~~e~ 412 (477)
.+.+.+.+.+ +... ...|+++|++++. ...+++..++++ ||.+.|+. ++++|++++ ..++++
T Consensus 317 ~l~~~~~~~~~~~~~-~~~g~~~~i~~~~--------~~~~~~~~l~~~-Gv~v~~~~------~~~lRi~~~~~~~~~~ 380 (396)
T PRK02627 317 KLRELLEKYPGIKEV-RGLGLMIGIELDR--------PAAEIVKKALEK-GLLINVTG------DNVLRLLPPLIISKEE 380 (396)
T ss_pred HHHHHHHhCCCeeee-ccCcEEEEEEecC--------cHHHHHHHHHHC-CeEEeecC------CCEEEEECCcccCHHH
Confidence 3433333332 2222 2357899998831 123577777766 99999863 467999986 359999
Q ss_pred HHHHHHHHHHHHhh
Q 011801 413 LQVALNRIAAFVQQ 426 (477)
Q Consensus 413 l~~~l~~l~~~~~~ 426 (477)
+++++++|++++++
T Consensus 381 i~~~~~~l~~~l~~ 394 (396)
T PRK02627 381 IDEAVDRLEEVLKE 394 (396)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998864
No 131
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.95 E-value=3.5e-26 Score=235.12 Aligned_cols=298 Identities=13% Similarity=0.139 Sum_probs=206.6
Q ss_pred CcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcC--CCCeEEEcCCCccchHHHHhhhCCcEEEEEe
Q 011801 87 GLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLAN--PGDAFLVPSPYYAAFDRDLSWRTGVQIVPVH 164 (477)
Q Consensus 87 G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~--~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~ 164 (477)
...+|++++|++++ .++.|++++| ++|+..++..+.. +||.|+++.++|..+...++.. |.++..++
T Consensus 92 ~~~~Le~~la~~~g---------~~~~i~~~sG-~~a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~~~-g~~~~~~~ 160 (410)
T PRK13392 92 PHVLLERELADLHG---------KESALLFTSG-YVSNDAALSTLGKLLPGCVILSDALNHASMIEGIRRS-GAEKQVFR 160 (410)
T ss_pred HHHHHHHHHHHHhC---------CCCEEEECcH-HHHHHHHHHHHhcCCCCCEEEEehhhhHHHHHHHHHc-CCeEEEEe
Confidence 36799999999986 2466777777 4677777776653 8998888777777776666655 88876664
Q ss_pred ccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcc
Q 011801 165 CDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFT 244 (477)
Q Consensus 165 ~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~ 244 (477)
. + |.+.+++.+++.. ..++++|++++|+||||.+.+ +++|.++|+++|+++|+||+|+...++.. ..
T Consensus 161 ~---~----d~~~l~~~l~~~~--~~~t~~v~i~~~~n~tG~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~-g~ 227 (410)
T PRK13392 161 H---N----DLADLEEQLASVD--PDRPKLIAFESVYSMDGDIAP---IEAICDLADRYNALTYVDEVHAVGLYGAR-GG 227 (410)
T ss_pred C---C----CHHHHHHHHHhcc--CCCCEEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEECCccccCcCCC-CC
Confidence 2 1 4566766665431 237889999999999999999 88888889999999999999984334332 12
Q ss_pred cHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhcc-c--C-CCchHHHHHHHHhcCChhhHHH
Q 011801 245 SVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSS-F--G-LVSSQTQYLLASMLSDDEFVDN 320 (477)
Q Consensus 245 s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~~-~--~-~vs~~~q~~~~~~L~~~~~~~~ 320 (477)
.+..... ......++++||||.||++| ||+++++ .+.+.+++... + + ..++..+.++.+.|+..+.
T Consensus 228 g~~~~~~---~~~~~div~~tlsK~~g~~G---G~~~~~~-~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~~~--- 297 (410)
T PRK13392 228 GIAERDG---LMDRIDMIQGTLAKAFGCLG---GYIAASA-DLIDFVRSFAPGFIFTTALPPAVAAGATAAIRHLKT--- 297 (410)
T ss_pred chhhhcc---CCCCCcEEEEEChHhhhccc---chhhcCH-HHHHHHHHhCcchhccCcCCHHHHHHHHHHHHHHhc---
Confidence 2222111 01122377899999999998 9998854 45554544432 2 1 2344667777777754322
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCC-CCCC
Q 011801 321 FLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQC-TEPG 399 (477)
Q Consensus 321 ~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~-~~~~ 399 (477)
....+++++++++++.+.|++.|+++.++.+++ +.+.++.. ....++++.+++++||.+.++..... .+.+
T Consensus 298 -~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~-~~i~~~~~------~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~ 369 (410)
T PRK13392 298 -SQTERDAHQDRVAALKAKLNANGIPVMPSPSHI-VPVMVGDP------TLCKAISDRLMSEHGIYIQPINYPTVPRGTE 369 (410)
T ss_pred -CHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCE-EEEEeCCH------HHHHHHHHHHHHhCCEEEeeeCCCCCCCCCc
Confidence 233456788889999999999998877766654 33444321 11235777787778999998753322 2346
Q ss_pred EEEEEeccC-CHHHHHHHHHHHHHHHhh
Q 011801 400 WFRVCFANM-DDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 400 ~~Rl~~~~~-~~e~l~~~l~~l~~~~~~ 426 (477)
++|+++... ++++++.++++|+++.++
T Consensus 370 ~lRis~~~~~t~edid~l~~aL~~~~~~ 397 (410)
T PRK13392 370 RLRITPTPLHDDEDIDALVAALVAIWDR 397 (410)
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 899999654 899999999999998765
No 132
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.95 E-value=4.1e-26 Score=232.52 Aligned_cols=337 Identities=14% Similarity=0.127 Sum_probs=217.4
Q ss_pred CCcccccccccccc-c-cHHHHHHHHHhCCCCcccccccccccccccccCCCCC----cHHHHHHHHHHHhcccCCCCcc
Q 011801 36 NPGGVIQLGLAENQ-L-CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHG----LPEFRQAVAKFMGKGRGGRVTF 109 (477)
Q Consensus 36 ~~~~~i~l~~~~n~-~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G----~~~lr~aia~~~~~~~g~~~~~ 109 (477)
....+|||+.+++. + +++.+.+.+.+.-.. -+ . ....|....| ..+++++++++++
T Consensus 37 ~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~-----~~---~-~~~~~~~~~g~~~~~~~l~~~la~~~~--------- 98 (385)
T PRK05958 37 DGRRMLNFASNDYLGLARHPRLIAAAQQAARR-----YG---A-GSGGSRLVTGNSPAHEALEEELAEWFG--------- 98 (385)
T ss_pred CCceEEEeeCCCcccCCCCHHHHHHHHHHHHh-----cC---C-CCCCcCcccCCcHHHHHHHHHHHHHhC---------
Confidence 45678999988752 2 345555555442110 00 0 0011211223 3566666666654
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhC
Q 011801 110 DPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEAS 189 (477)
Q Consensus 110 ~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~ 189 (477)
.++.|++++ +++++..++..++++||.|+++.|+|+.+...+... |.+++.++. .|++++++.++.. .
T Consensus 99 ~~~~i~~~~-g~~~~~~~l~~~~~~gd~V~~~~~~~~~~~~~~~~~-g~~~~~~~~-------~d~~~l~~~i~~~---~ 166 (385)
T PRK05958 99 AERALLFSS-GYAANLAVLTALAGKGDLIVSDKLNHASLIDGARLS-RARVRRYPH-------NDVDALEALLAKW---R 166 (385)
T ss_pred CCcEEEECc-HHHHHHHHHHHhCCCCCEEEEeCccCHHHHHHHHhc-CCceEEeCC-------CCHHHHHHHHHhc---c
Confidence 245555555 556666777888999999999999999988877766 988888764 2688898888641 1
Q ss_pred CCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcc
Q 011801 190 INIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKD 269 (477)
Q Consensus 190 ~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~ 269 (477)
.+..++++.+++||+|...+ +++|+++|+++|+++|+||+|+...+.... ........ .+ ..+++++++|+||.
T Consensus 167 ~~~~lvi~~~~~~~~G~~~~---l~~i~~ia~~~~~~li~De~~~~g~~~~~g-~~~~~~~~-~~-~~~~~i~~~s~sK~ 240 (385)
T PRK05958 167 AGRALIVTESVFSMDGDLAP---LAELVALARRHGAWLLVDEAHGTGVLGPQG-RGLAAEAG-LA-GEPDVILVGTLGKA 240 (385)
T ss_pred CCCeEEEEEecccCCCCcCC---HHHHHHHHHHhCCEEEEECcccccccCCCC-CchHHhhC-CC-CCCceEEEEechhh
Confidence 13455566667899998877 888899999999999999999754443211 11111110 00 23577899999999
Q ss_pred cCCCCceEEEEEeCCHHHHHHHHHh-ccc--C-CCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Q 011801 270 MGLPGFRVGIVYSFNDTVVNCGRKM-SSF--G-LVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGI 345 (477)
Q Consensus 270 ~g~~G~RvG~i~~~~~~i~~~~~~~-~~~--~-~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi 345 (477)
+|.+| ||++++++ +.+.+.+. ..+ . ..++..+.++.+.|+..+ .. .+..+++.++++++.+.|++.|+
T Consensus 241 ~~~~G---g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~---~~-~~~~~~~~~~~~~l~~~L~~~~~ 312 (385)
T PRK05958 241 LGSSG---AAVLGSET-LIDYLINRARPFIFTTALPPAQAAAARAALRILR---RE-PERRERLAALIARLRAGLRALGF 312 (385)
T ss_pred cccCC---cEEEcCHH-HHHHHHHhCccceecCCCCHHHHHHHHHHHHHHh---cC-HHHHHHHHHHHHHHHHHHHHcCC
Confidence 99777 99988544 44433322 122 1 133344444445554321 11 34567788888999999998888
Q ss_pred eEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCC-CCCCCEEEEEecc-CCHHHHHHHHHHHHHH
Q 011801 346 NCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQ-CTEPGWFRVCFAN-MDDDTLQVALNRIAAF 423 (477)
Q Consensus 346 ~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~-~~~~~~~Rl~~~~-~~~e~l~~~l~~l~~~ 423 (477)
++.++.+ .|+|+.++.. ....++++.+.+ .||.+.++..+. ..+++++||+++. .++++++.++++|+++
T Consensus 313 ~~~~~~~-~~~~~~~~~~------~~~~~~~~~l~~-~gI~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 313 QLMDSQS-AIQPLIVGDN------ERALALAAALQE-QGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEA 384 (385)
T ss_pred CcCCCCC-CEEEEEeCCH------HHHHHHHHHHHH-CCceEecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhc
Confidence 8766655 5778887642 122357777764 599999865443 2235699999974 4899999999999875
Q ss_pred H
Q 011801 424 V 424 (477)
Q Consensus 424 ~ 424 (477)
+
T Consensus 385 ~ 385 (385)
T PRK05958 385 L 385 (385)
T ss_pred C
Confidence 3
No 133
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.95 E-value=7.1e-26 Score=228.54 Aligned_cols=295 Identities=15% Similarity=0.176 Sum_probs=207.8
Q ss_pred cHHHHHHHHHHHhcccCCCCccCC-CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccc--hHHHHhhhCCcEEEEEe
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDP-DRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAA--FDRDLSWRTGVQIVPVH 164 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~-~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~--~~~~~~~~~g~~~~~v~ 164 (477)
..++++.++++++ .++ +.+++++|+++++.+++.+++++||.|+++.++|.. +...++.. |++++.++
T Consensus 34 ~~~~~~~la~~~g--------~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~-g~~~~~v~ 104 (356)
T cd06451 34 MDEILEGLRYVFQ--------TENGLTFLLSGSGTGAMEAALSNLLEPGDKVLVGVNGVFGDRWADMAERY-GADVDVVE 104 (356)
T ss_pred HHHHHHHHHHHhc--------CCCCCEEEEecCcHHHHHHHHHHhCCCCCEEEEecCCchhHHHHHHHHHh-CCCeEEee
Confidence 4577777777776 333 457889999999999999999999999999987765 44556666 99999999
Q ss_pred ccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcc
Q 011801 165 CDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFT 244 (477)
Q Consensus 165 ~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~ 244 (477)
.+. ++.+|++++++++++. ++++|++++|+||+|.+.+ +++|.++|+++|+++|+|++|+ ++..+ .
T Consensus 105 ~~~--~~~~~~~~l~~~i~~~-----~~~~v~i~~~~~~~G~~~~---~~~i~~~a~~~~~~li~D~~~~---~g~~~-~ 170 (356)
T cd06451 105 KPW--GEAVSPEEIAEALEQH-----DIKAVTLTHNETSTGVLNP---LEGIGALAKKHDALLIVDAVSS---LGGEP-F 170 (356)
T ss_pred cCC--CCCCCHHHHHHHHhcc-----CCCEEEEeccCCCcccccC---HHHHHHHHHhcCCEEEEeeehh---ccCcc-c
Confidence 864 4678999999988642 6889999999999999999 6678888889999999999986 33222 2
Q ss_pred cHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHH----hcc----------------c-CCCchH
Q 011801 245 SVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRK----MSS----------------F-GLVSSQ 303 (477)
Q Consensus 245 s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~----~~~----------------~-~~vs~~ 303 (477)
++. ..+..+++.|++|.++.| .++||++.+++.+.. +.. ... . ++.+..
T Consensus 171 ~~~--------~~~~d~~~~s~~K~l~~p-~g~G~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~ 240 (356)
T cd06451 171 RMD--------EWGVDVAYTGSQKALGAP-PGLGPIAFSERALER-IKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVN 240 (356)
T ss_pred ccc--------ccCccEEEecCchhccCC-CCcceeEECHHHHHH-HHhcCCCCceeecHHHHHhhhcccCCCCCCChHH
Confidence 211 112335678999999844 469999997664433 321 100 1 112233
Q ss_pred HHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCC---ceEEEEeeccchhhccCchHHHHHHHHHH
Q 011801 304 TQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSN---AGLFFWMDLRHLLKEKTLEGEIALWRTIV 380 (477)
Q Consensus 304 ~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~---~g~~~~~~l~~~~~~~~~~~e~~l~~~ll 380 (477)
.+.++.+++..- .+..+++..++.+++.+++.+.|.+.|+++..+. .+.++|+.++...+ ..++.+.+.
T Consensus 241 ~~~a~~aal~~l--~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~L~ 312 (356)
T cd06451 241 LLYALREALDLI--LEEGLENRWARHRRLAKALREGLEALGLKLLAKPELRSPTVTAVLVPEGVD------GDEVVRRLM 312 (356)
T ss_pred HHHHHHHHHHHH--HHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCcccCCCceEEEECCCCCC------HHHHHHHHH
Confidence 334444444321 1223456667778888999999998888776422 34556777764321 124666665
Q ss_pred HhcCeEEeCCCCCCCCCCCEEEEEeccC-CHHHHHHHHHHHHHHHh
Q 011801 381 NDVKLNVSPGSSFQCTEPGWFRVCFANM-DDDTLQVALNRIAAFVQ 425 (477)
Q Consensus 381 ~~~gI~v~pg~~f~~~~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~ 425 (477)
++.||.+.+|..+ ..++++|++++.. +++++++++++|+++++
T Consensus 313 ~~~gI~~~~g~~~--~~~~~iRis~~~~~~~e~v~~~~~~l~~~~~ 356 (356)
T cd06451 313 KRYNIEIAGGLGP--TAGKVFRIGHMGEATREDVLGVLSALEEALK 356 (356)
T ss_pred HhCCEEEeccccc--ccCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 5559999998753 3457999999765 89999999999998763
No 134
>PRK02948 cysteine desulfurase; Provisional
Probab=99.95 E-value=1.6e-26 Score=235.52 Aligned_cols=295 Identities=17% Similarity=0.174 Sum_probs=212.3
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhc----CCCCeEEEcCCCccchH---HHHhhhCCcEE
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLA----NPGDAFLVPSPYYAAFD---RDLSWRTGVQI 160 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~----~~Gd~vlv~~P~y~~~~---~~~~~~~g~~~ 160 (477)
..++|+.+|++++ .++++|++|+|+++++..++..+. ++||.|++..+.|+.+. ..++.. |+++
T Consensus 45 ~~~~r~~la~~~g--------~~~~~i~~~~g~t~a~~~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~-g~~v 115 (381)
T PRK02948 45 LQVCRKTFAEMIG--------GEEQGIYFTSGGTESNYLAIQSLLNALPQNKKHIITTPMEHASIHSYFQSLESQ-GYTV 115 (381)
T ss_pred HHHHHHHHHHHhC--------CCCCeEEEeCcHHHHHHHHHHHHHHhccCCCCEEEECCcccHHHHHHHHHHHhC-CCEE
Confidence 4678888888886 468899999999999999888875 57899999886666543 445555 9999
Q ss_pred EEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCC
Q 011801 161 VPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSS 240 (477)
Q Consensus 161 ~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~ 240 (477)
..++++. ++.+|++++++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++++ |+.
T Consensus 116 ~~v~~~~--~~~~d~~~l~~~l~~------~~~lv~~~~~~n~tG~~~~---~~~I~~l~~~~~~~vivD~~~~---~g~ 181 (381)
T PRK02948 116 TEIPVDK--SGLIRLVDLERAITP------DTVLASIQHANSEIGTIQP---IAEIGALLKKYNVLFHSDCVQT---FGK 181 (381)
T ss_pred EEEeeCC--CCCCCHHHHHHhcCC------CCEEEEEECCcCCcEeehh---HHHHHHHHHHcCCEEEEEChhh---ccc
Confidence 9999863 467899999988753 6789999999999999999 6788888999999999998765 432
Q ss_pred CCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHH------HhcccCCCchHHHHHHHHhcCC
Q 011801 241 PKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGR------KMSSFGLVSSQTQYLLASMLSD 314 (477)
Q Consensus 241 ~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~------~~~~~~~vs~~~q~~~~~~L~~ 314 (477)
.+ ..+ . ..+..+++.|+||.+|.+| +|+++++++....... ....+++++.+.+.++..++..
T Consensus 182 ~~-~~~----~----~~~~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~ 250 (381)
T PRK02948 182 LP-IDV----F----EMGIDSLSVSAHKIYGPKG--VGAVYINPQVRWKPVFPGTTHEKGFRPGTVNVPGIAAFLTAAEN 250 (381)
T ss_pred cc-cCc----c----cCCCCEEEecHHhcCCCCc--EEEEEEcCCCCCCCcccCCCCCCCcCCCCccHHHHHHHHHHHHH
Confidence 22 111 1 2345678899999999888 8998886543100000 0012455777888888877764
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEE-----eeccchhhccCchHHHHHHHHHHHhcCeEEeC
Q 011801 315 DEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFW-----MDLRHLLKEKTLEGEIALWRTIVNDVKLNVSP 389 (477)
Q Consensus 315 ~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~-----~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~p 389 (477)
. .+++++.++++++.++++.+.|+++|+++.......+.. +.++. ... .++... +.++||.|++
T Consensus 251 ~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~i~~~~~~~------~~~-~~~~~~-l~~~gI~v~~ 319 (381)
T PRK02948 251 I---LKNMQEESLRFKELRSYFLEQIQTLPLPIEVEGHSTSCLPHIIGVTIKG------IEG-QYTMLE-CNRRGIAIST 319 (381)
T ss_pred H---HHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEeCCCccCcCCEEEEEeCC------CCH-HHHHHh-cccCCEEEEc
Confidence 2 234677788999999999999999887665432122221 12221 111 134444 4567999999
Q ss_pred CCCCCCC-----------------CCCEEEEEeccC-CHHHHHHHHHHHHHHHhhh
Q 011801 390 GSSFQCT-----------------EPGWFRVCFANM-DDDTLQVALNRIAAFVQQD 427 (477)
Q Consensus 390 g~~f~~~-----------------~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~~~ 427 (477)
|+.|... ..+++|+|++.. ++++++.+++.|++++++.
T Consensus 320 g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 375 (381)
T PRK02948 320 GSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIGNQF 375 (381)
T ss_pred hHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 8864221 146899999865 8999999999999988654
No 135
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.95 E-value=1.2e-25 Score=226.03 Aligned_cols=296 Identities=16% Similarity=0.146 Sum_probs=202.0
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccC
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDI 167 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~ 167 (477)
..+++++++++++ . ++ .++++++++++..++..++++||.|++++|+|+.+...++.. |+++++++.
T Consensus 48 ~~~l~~~la~~~~--------~-~~-~iv~~sg~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~-g~~~~~~~~-- 114 (349)
T cd06454 48 HEELEEELAEFHG--------K-EA-ALVFSSGYAANDGVLSTLAGKGDLIISDSLNHASIIDGIRLS-GAKKRIFKH-- 114 (349)
T ss_pred HHHHHHHHHHHhC--------C-CC-EEEeccHHHHHHHHHHHhcCCCCEEEEehhhhHHHHHHHHHc-CCceEEecC--
Confidence 4677777777764 2 23 455555577888888888899999999999999888777766 999887762
Q ss_pred CCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHH
Q 011801 168 SNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVA 247 (477)
Q Consensus 168 ~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~ 247 (477)
+|.+.+++.+++.. +..+++++++++|+||||...+ +++|+++|+++|+++|+|++|+...+.... ....
T Consensus 115 -----~~~~~le~~i~~~~-~~~~~~~v~~~~~~~~tG~~~~---~~~i~~~~~~~~~~livD~a~~~g~~~~~~-~~~~ 184 (349)
T cd06454 115 -----NDMEDLEKLLREAR-RPYGKKLIVTEGVYSMDGDIAP---LPELVDLAKKYGAILFVDEAHSVGVYGPHG-RGVE 184 (349)
T ss_pred -----CCHHHHHHHHHHhh-ccCCCeEEEEeccccCCCCccC---HHHHHHHHHHcCCEEEEEccccccccCCCC-CChh
Confidence 46788888887532 1236778888999999999887 788899999999999999999742232111 1111
Q ss_pred HhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhccc---CCCchHHHHHHHHhcCChhhHHHHHHH
Q 011801 248 EVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSF---GLVSSQTQYLLASMLSDDEFVDNFLVE 324 (477)
Q Consensus 248 ~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~~~---~~vs~~~q~~~~~~L~~~~~~~~~~~~ 324 (477)
..... ..+.+++++|+||.+|.+| ||++++++.+.........+ +.++.+.+.++...|... .. ...
T Consensus 185 ~~~~~---~~~~~i~~~s~sK~~~~~g---G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~-~~~ 254 (349)
T cd06454 185 EFGGL---TDDVDIIMGTLGKAFGAVG---GYIAGSKELIDYLRSYARGFIFSTSLPPAVAAAALAALEVL---QG-GPE 254 (349)
T ss_pred hhccc---cccCcEEEeechhhhcccC---CEEECCHHHHHHHHHhchhhhccCCCCHHHHHHHHHHHHHH---hc-CHH
Confidence 11100 2356788999999998655 99988654433332222222 234555555555555332 11 345
Q ss_pred HHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCC-CCCCCEEEE
Q 011801 325 TSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQ-CTEPGWFRV 403 (477)
Q Consensus 325 ~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~-~~~~~~~Rl 403 (477)
.+++++++++.+.+.|.+.|+.+..+.++.+.++.++... ...++.+.+.++ ||.++++.... ....+++|+
T Consensus 255 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~------~~~~~~~~L~~~-gI~~~~~~~~~~~~~~~~iRi 327 (349)
T cd06454 255 RRERLQENVRYLRRGLKELGFPVGGSPSHIIPPLIGDDPA------KAVAFSDALLER-GIYVQAIRYPTVPRGTARLRI 327 (349)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcccCCCCCcEEEEeCCChH------HHHHHHHHHHhC-CceEEEecCCccCCCCCeEEE
Confidence 5778888999999999988887776655555555444211 122566666665 99998863221 112478999
Q ss_pred Eecc-CCHHHHHHHHHHHHHH
Q 011801 404 CFAN-MDDDTLQVALNRIAAF 423 (477)
Q Consensus 404 ~~~~-~~~e~l~~~l~~l~~~ 423 (477)
+++. .+++++++++++|+++
T Consensus 328 ~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 328 SLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred EEeCCCCHHHHHHHHHHHHHh
Confidence 9976 4999999999999864
No 136
>PRK07049 methionine gamma-lyase; Validated
Probab=99.95 E-value=3.7e-25 Score=227.18 Aligned_cols=225 Identities=20% Similarity=0.293 Sum_probs=170.1
Q ss_pred ccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHH----hh
Q 011801 79 IAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDL----SW 154 (477)
Q Consensus 79 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~----~~ 154 (477)
..+|+++ ....|++++|++.+ .+++++++|+++|+.+++.+++++||.|+++.|+|+++...+ ..
T Consensus 77 y~R~~~P-t~~~Le~~lA~leg----------~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~ 145 (427)
T PRK07049 77 YSRFNHP-NSEIVEDRLAVYEG----------AESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRN 145 (427)
T ss_pred ccCCCCc-CHHHHHHHHHHHhC----------CCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHh
Confidence 3567655 36899999999986 456888899999999999999999999999999999997654 33
Q ss_pred hCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHh---cCeEEEecc
Q 011801 155 RTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFIND---KNIHLVCDE 231 (477)
Q Consensus 155 ~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~---~~~~lI~De 231 (477)
. |++++.++. ..|.+++++++++..+ ..++|+|++++|+||||.+++.+++.+|++.|.. +++++|+||
T Consensus 146 ~-Gi~~v~~~~------~~d~~~l~~~l~~~~~-~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDe 217 (427)
T PRK07049 146 F-GVGAVGFAD------GLSEAAIGAAAEAAAA-KGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDN 217 (427)
T ss_pred c-CcEEEEEeC------CCCHHHHHHHHHhhcc-CCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEEC
Confidence 4 888777762 1467788877754321 1378999999999999999999999999988654 689999999
Q ss_pred cccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccC-CCCceEEEEEeCCHHHHHHHHHhcc-c-CCCchHHHHHH
Q 011801 232 IYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMG-LPGFRVGIVYSFNDTVVNCGRKMSS-F-GLVSSQTQYLL 308 (477)
Q Consensus 232 ~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g-~~G~RvG~i~~~~~~i~~~~~~~~~-~-~~vs~~~q~~~ 308 (477)
+|....+.. ++ ..+..++++||||.+| .+|+|+||++++++ +.+.+++... + ..++++.|+++
T Consensus 218 ty~~~~~~~----pl---------~~g~divv~S~SK~~gG~~glr~G~vv~~~~-l~~~l~~~~~~~g~~ls~~~a~l~ 283 (427)
T PRK07049 218 TLLGPVFQK----PL---------EHGADLSVYSLTKYVGGHSDLVAGAVLGRKA-LIRQVRALRSAIGTQLDPHSCWML 283 (427)
T ss_pred CccccccCC----cc---------ccCCCEEEEcCceeecCCCCcEEEEEECCHH-HHHHHHHHHHhcCCCCCHHHHHHH
Confidence 997542211 11 1234588899999999 79999999998654 5454444332 2 34788899988
Q ss_pred HHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 011801 309 ASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV 343 (477)
Q Consensus 309 ~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~ 343 (477)
...|+. +..+.++..++++.+.+.|+++
T Consensus 284 ~r~L~t-------l~~R~~~~~~~a~~la~~L~~~ 311 (427)
T PRK07049 284 GRSLET-------LVLRMERANRNARAVAEFLRDH 311 (427)
T ss_pred HcCCCh-------HHHHHHHHHHHHHHHHHHHHhC
Confidence 888864 2333455577888899999876
No 137
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.95 E-value=2.7e-25 Score=228.10 Aligned_cols=294 Identities=16% Similarity=0.202 Sum_probs=207.8
Q ss_pred CcHHHHHHHHHHHhcccCCCCccC-CCcEEEeCChHHHHHHHHHHh----cCCCCeEEEcCCCccchH----HHHhhhCC
Q 011801 87 GLPEFRQAVAKFMGKGRGGRVTFD-PDRIVMGGGATGANELIMFCL----ANPGDAFLVPSPYYAAFD----RDLSWRTG 157 (477)
Q Consensus 87 G~~~lr~aia~~~~~~~g~~~~~~-~~~i~~t~G~t~al~~i~~~l----~~~Gd~vlv~~P~y~~~~----~~~~~~~g 157 (477)
++.++|+++|++++ .+ +++|++|+|+++++.+++.++ .++||.|+++++.|+... ..++.. |
T Consensus 63 ~~~~~r~~ia~~~~--------~~~~~~v~~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~-g 133 (403)
T TIGR01979 63 AYEAVREKVAKFIN--------AASDEEIVFTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERT-G 133 (403)
T ss_pred HHHHHHHHHHHHhC--------cCCCCeEEEeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhc-C
Confidence 46799999999987 34 679999999999999998875 578999999999877533 344444 9
Q ss_pred cEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccc
Q 011801 158 VQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATV 237 (477)
Q Consensus 158 ~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~ 237 (477)
++++.++.+ .++.++++++++++.+ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+..
T Consensus 134 ~~~~~v~~~--~~~~~~~~~l~~~i~~------~~~lv~~~~~~~~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~g- 201 (403)
T TIGR01979 134 ATLKFIPLD--DDGTLDLDDLEKLLTE------KTKLVAITHVSNVLGTVNP---VEEIAKLAHQVGAKVLVDGAQAVP- 201 (403)
T ss_pred cEEEEEecC--CCCCCCHHHHHHHhcc------CCeEEEEEcccccccccCC---HHHHHHHHHHcCCEEEEEchhhcC-
Confidence 999999876 3467899999998864 7899999999999999999 788888999999999999999732
Q ss_pred cCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhc----------------------
Q 011801 238 FSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMS---------------------- 295 (477)
Q Consensus 238 ~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~---------------------- 295 (477)
..+ ..+. ..+..+++.|++|.+|.+| +|+++++++.+ +.+....
T Consensus 202 --~~~-~~~~--------~~~~d~~~~s~~K~~gp~G--~g~l~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 267 (403)
T TIGR01979 202 --HMP-VDVQ--------ALDCDFYVFSGHKMYGPTG--IGVLYGKEELL-EQMPPFLGGGEMIAEVSFEETTYNEAPHK 267 (403)
T ss_pred --ccc-cCcc--------ccCCCEEEEecccccCCCC--ceEEEEchHHH-hcCCCeecCCCceeecccCccccCCChhh
Confidence 111 1211 1244588899999998666 99999865533 2221100
Q ss_pred -ccCCCchHHHHHHHHhcCChhhHHH-HHHHHHHHHHHHHHHHHHHHhhC-CCeEecCCc----eEEEEeeccchhhccC
Q 011801 296 -SFGLVSSQTQYLLASMLSDDEFVDN-FLVETSKRLAKRHHNFTKGLEQV-GINCLKSNA----GLFFWMDLRHLLKEKT 368 (477)
Q Consensus 296 -~~~~vs~~~q~~~~~~L~~~~~~~~-~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~~~~----g~~~~~~l~~~~~~~~ 368 (477)
..++.+.....++...++. +.+ -.++..+++.+.++.+.+.|+++ |+++..+.. +.++.+.++.. .
T Consensus 268 ~~~gt~~~~~~~al~~al~~---~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~~~~~~v~~~~~~~-~--- 340 (403)
T TIGR01979 268 FEAGTPNIAGVIGLGAAIDY---LEAIGLENIEAHEHELTAYALERLGEIPGLRIYGPRDAEDRGGIISFNVEGV-H--- 340 (403)
T ss_pred cCCCCccHHHHHHHHHHHHH---HHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccccCceEEEEeCCc-C---
Confidence 0122333444444444421 111 13455677777888888888877 788775431 33555566531 1
Q ss_pred chHHHHHHHHHHHhcCeEEeCCCCCC------CCCCCEEEEEeccC-CHHHHHHHHHHHHHHHhh
Q 011801 369 LEGEIALWRTIVNDVKLNVSPGSSFQ------CTEPGWFRVCFANM-DDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 369 ~~~e~~l~~~ll~~~gI~v~pg~~f~------~~~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~~ 426 (477)
. .++ ...+++.||.+++|+.|. ...++++||+++.. ++++++.+++.|+++++.
T Consensus 341 --~-~~~-~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t~~di~~l~~~l~~~~~~ 401 (403)
T TIGR01979 341 --P-HDV-GTILDEEGIAVRSGHHCAQPLMRRFGVPATCRASFYIYNTEEDIDALVEALKKVRKF 401 (403)
T ss_pred --H-HHH-HHHHhhCCEEEcchhhhhHHHHHHhCCCCEEEEEeccCCCHHHHHHHHHHHHHHHHH
Confidence 1 133 345667899999887442 12357999999865 899999999999987754
No 138
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.95 E-value=2.5e-25 Score=224.19 Aligned_cols=295 Identities=16% Similarity=0.199 Sum_probs=207.0
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCC--cEEEeCChHHHHHHHHHHhcCCCCeEEEcCC-Cccc-hHHHHhhhCCcEEEEE
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPD--RIVMGGGATGANELIMFCLANPGDAFLVPSP-YYAA-FDRDLSWRTGVQIVPV 163 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~--~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P-~y~~-~~~~~~~~~g~~~~~v 163 (477)
..++|+.++++++ ++++ .|++++|+++++..++..+..+||.+++..+ +|+. +...++.. |.+++.+
T Consensus 33 ~~~~~~~la~~~~--------~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~~~~~~~~~~~~~~a~~~-g~~~~~i 103 (355)
T TIGR03301 33 TDQVRDRLLALAG--------GDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLVLINGAYGERLAKICEYL-GIPHTDL 103 (355)
T ss_pred HHHHHHHHHHHhc--------CCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEEECCCchhhHHHHHHHHc-CCceEEE
Confidence 5688888888886 3333 6888999999999999999888888776555 4554 34455555 9999999
Q ss_pred eccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCc
Q 011801 164 HCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKF 243 (477)
Q Consensus 164 ~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~ 243 (477)
+.+. ++.+|++++++++++ +.+++.+++++++||||...+ +++|+++|+++++++|+|++++ ++..+
T Consensus 104 ~~~~--~~~~d~~~l~~~l~~----~~~~~~v~~~~~~~~~G~~~~---~~~i~~l~~~~~~~livD~~~s---~g~~~- 170 (355)
T TIGR03301 104 NFSE--YEPPDLNRIEEALAA----DPDITHVATVHHETTTGILNP---LEAIAKVARSHGAVLIVDAMSS---FGAIP- 170 (355)
T ss_pred ecCC--CCCCCHHHHHHHHHh----CCCceEEEEEecCCcccchhH---HHHHHHHHHHcCCEEEEEeccc---cCCcc-
Confidence 8753 467899999998864 236778888999999999988 7889999999999999999876 33322
Q ss_pred ccHHHhhhhccCCCCcEEEEecCCccc-CCCCceEEEEEeCCHHHHHHHHHh------------------cccCCCchHH
Q 011801 244 TSVAEVIQEMDCNRDLIHIIYSLSKDM-GLPGFRVGIVYSFNDTVVNCGRKM------------------SSFGLVSSQT 304 (477)
Q Consensus 244 ~s~~~~~~~~~~~~~~viiv~SlSK~~-g~~G~RvG~i~~~~~~i~~~~~~~------------------~~~~~vs~~~ 304 (477)
.++. ..+..++++|++|.+ |.+| +||++++++.+....... ...++.+...
T Consensus 171 ~~~~--------~~~~d~~~~s~~K~l~~~~G--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~ 240 (355)
T TIGR03301 171 IDIE--------ELDVDALIASANKCLEGVPG--FGFVIARRDLLEASAGNARSLYLDLYDQWAYMEKTGKWRFTPPTHT 240 (355)
T ss_pred cchh--------hcCccEEEecCCcccccCCc--eeEEEECHHHHHHhhCCCCCceeeHHHHHHHhhhcCCCCCCCcHHH
Confidence 2222 124557789999986 5556 799999766544322110 0112355566
Q ss_pred HHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecC---CceEEEEeeccchhhccCchHHHHHHHHHHH
Q 011801 305 QYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKS---NAGLFFWMDLRHLLKEKTLEGEIALWRTIVN 381 (477)
Q Consensus 305 q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~---~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~ 381 (477)
+.++..++....- +..+++..++++++++++.+.|++.|+++..+ .++.++|+.++.... .. ..++.+.+ .
T Consensus 241 ~~a~~~al~~~~~-~g~~~~~~~~~~~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~l-~ 314 (355)
T TIGR03301 241 VYAFAQALEELEA-EGGVPARIARYRRNRELLVDGLRALGFQPLLPERWQSPIIVSFLYPDDPD---FD-FDDFYQEL-K 314 (355)
T ss_pred HHHHHHHHHHHHH-cccHHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCCCCcEEEEECCCCCc---ch-HHHHHHHH-H
Confidence 6665555542110 11246667788889999999999888875533 245678888874210 11 12445554 5
Q ss_pred hcCeEEeCCCCCCCCCCCEEEEEec-cCCHHHHHHHHHHHHHH
Q 011801 382 DVKLNVSPGSSFQCTEPGWFRVCFA-NMDDDTLQVALNRIAAF 423 (477)
Q Consensus 382 ~~gI~v~pg~~f~~~~~~~~Rl~~~-~~~~e~l~~~l~~l~~~ 423 (477)
+.||.+.+|..+. .+++||++. ..++++++.+++.|+++
T Consensus 315 ~~gi~i~~~~~~~---~~~iRis~~~~~~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 315 ERGFVIYPGKLTL---ADTFRIGTIGEIDAADIERLLEAIKDA 354 (355)
T ss_pred HCCEEEECCcccc---ccEEEEecCCCCCHHHHHHHHHHHHhh
Confidence 5699999987553 278999984 45899999999999875
No 139
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.95 E-value=1.6e-25 Score=227.97 Aligned_cols=330 Identities=14% Similarity=0.109 Sum_probs=209.1
Q ss_pred CCCccccccccc--cccccH--HHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccC
Q 011801 35 QNPGGVIQLGLA--ENQLCF--DLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFD 110 (477)
Q Consensus 35 ~~~~~~i~l~~~--~n~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~ 110 (477)
.+....||+..+ .|.+++ +.+.+.+.+.-+... .....|++ .-..+|.++++++++
T Consensus 24 ~~g~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~---------~~~~~~~~-~~~~~l~~~la~~~g---------- 83 (379)
T TIGR00707 24 VNGKEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLV---------HVSNLYYT-EPQEELAEKLVEHSG---------- 83 (379)
T ss_pred CCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhcc---------ccccccCC-HHHHHHHHHHHhhCC----------
Confidence 344567898764 565543 455555544211000 01123432 224556666666553
Q ss_pred CCcEEEeCChHHHHHHHHHHhc---C----CCCeEEEcCCCccchHHHHhhhCCcEEE----EEeccCCCCccc--CHHH
Q 011801 111 PDRIVMGGGATGANELIMFCLA---N----PGDAFLVPSPYYAAFDRDLSWRTGVQIV----PVHCDISNNFKI--TREA 177 (477)
Q Consensus 111 ~~~i~~t~G~t~al~~i~~~l~---~----~Gd~vlv~~P~y~~~~~~~~~~~g~~~~----~v~~~~~~~f~i--~~~~ 177 (477)
.+++++++|+++|+..++..+. . +||+|++++|+|+++...+... +.... ..++..+..+.. |+++
T Consensus 84 ~~~~~~~~sg~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~ 162 (379)
T TIGR00707 84 ADRVFFCNSGAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSA-TGQPKYQKGFEPLVPGFSYAPYNDIES 162 (379)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHh-cCChhhhccCCCCCCCceeeCCCCHHH
Confidence 3489999999999999987652 2 3799999999999877655544 33221 112221111111 7889
Q ss_pred HHHHHHHHHHhCCCeeEEEEeCCCCCcccC-CCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCC
Q 011801 178 LEAAYERAQEASINIKGLIITNPSNPLGTT-LDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCN 256 (477)
Q Consensus 178 l~~~~~~~~~~~~~~k~vii~nP~NPtG~~-~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~ 256 (477)
+++.+.+ ++++|+++.++||+|.. ++.+++++|.++|+++++++|+||+|.++.+.+.. .+... .. ..
T Consensus 163 l~~~~~~------~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~-~~~~~-~~---~~ 231 (379)
T TIGR00707 163 LKKAIDD------ETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKF-FAYEH-YG---IE 231 (379)
T ss_pred HHHHhhh------CeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchh-hhHHh-cC---CC
Confidence 9888764 68888886556677764 79999999999999999999999999876554431 22111 11 02
Q ss_pred CCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHh--cccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHH
Q 011801 257 RDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKM--SSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHH 334 (477)
Q Consensus 257 ~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~--~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~ 334 (477)
++ + .+|||.++ +|+|+||++++++ +.+.+... ......++++|.++.+.|+..+ . .+..++++++++
T Consensus 232 ~d-~---~t~sK~~~-~G~riG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~---~--~~~~~~~~~~~~ 300 (379)
T TIGR00707 232 PD-I---ITLAKGLG-GGVPIGATLAKEE-VAEAFTPGDHGSTFGGNPLACAAALAVLEVIE---K--ERLLENVKEKGD 300 (379)
T ss_pred CC-E---EEEccccc-CCcccEEEEEcHH-HHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHH---h--hhHHHHHHHHHH
Confidence 22 2 27899999 9999999999654 54444432 1222367888998887775211 0 123344555556
Q ss_pred HHHHHHhhC----CCeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEecc-CC
Q 011801 335 NFTKGLEQV----GINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFAN-MD 409 (477)
Q Consensus 335 ~l~~~L~~~----gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~-~~ 409 (477)
.+.+.|.+. ++... ...|+|+|++++.. ..++.+.+ .+.||.+.|+. ++++|++++. .+
T Consensus 301 ~~~~~l~~~~~~~~~~~~-~~~g~~~~~~~~~~--------~~~~~~~l-~~~Gv~v~~~~------~~~lRi~~~~~~t 364 (379)
T TIGR00707 301 YFKERLEELGKNYPNKEV-RGKGLMLGIELEAP--------CKDIVKKA-LEKGLLVNCAG------PKVLRFLPPLIIT 364 (379)
T ss_pred HHHHHHHHHHhhCCCCcc-ccCceEEEEEecCc--------HHHHHHHH-HHCCcEEeeCC------CCEEEEECCCcCC
Confidence 666655543 33222 23578999988631 12455554 45699999853 4789999865 59
Q ss_pred HHHHHHHHHHHHHH
Q 011801 410 DDTLQVALNRIAAF 423 (477)
Q Consensus 410 ~e~l~~~l~~l~~~ 423 (477)
++++++++++|+++
T Consensus 365 ~~~i~~~~~~l~~~ 378 (379)
T TIGR00707 365 KEEIDEAVSALEEA 378 (379)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999875
No 140
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.94 E-value=9.5e-25 Score=220.94 Aligned_cols=297 Identities=14% Similarity=0.154 Sum_probs=210.1
Q ss_pred cHHHHHHHHHHHhcccCCCCccCC--CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccch--HHHHhhhCCcEEEEE
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDP--DRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAF--DRDLSWRTGVQIVPV 163 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~--~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~--~~~~~~~~g~~~~~v 163 (477)
..++|+.++++++ .++ +.|++|+|+|++++.++..+..+||.+++..+.+.+. ...++.. |.+++.+
T Consensus 37 ~~~~r~~la~l~~--------~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~~~~~~~~a~~~-g~~~~~v 107 (363)
T TIGR02326 37 VEQIRQQLLALAT--------AEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAYGARIVQIAEYL-GIPHHVV 107 (363)
T ss_pred HHHHHHHHHHHhC--------CCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChhhHHHHHHHHHc-CCceEEE
Confidence 4567788888876 344 4799999999999999999988998888776655433 3445555 9999999
Q ss_pred eccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCc
Q 011801 164 HCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKF 243 (477)
Q Consensus 164 ~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~ 243 (477)
+++. +..+|++++++++++ +.+++++.+++++||||..++ +++|.++|+++|+++|+|++++ ++..+
T Consensus 108 ~~~~--~~~~d~~~l~~~l~~----~~~~~~v~~~~~~~~tG~~~~---i~~I~~l~~~~g~~livD~~~~---~g~~~- 174 (363)
T TIGR02326 108 DTGE--VEPPDVVEVEAILAA----DPAITHIALVHCETTTGILNP---IEAVAKLAHRHGKVTIVDAMSS---FGGIP- 174 (363)
T ss_pred eCCC--CCCCCHHHHHHHHhh----CCCccEEEEEeecCCccccCc---HHHHHHHHHHcCCEEEEEcccc---ccCcc-
Confidence 8763 456899999998864 235678889999999999999 7899999999999999999886 44332
Q ss_pred ccHHHhhhhccCCCCcEEEEecCCccc-CCCCceEEEEEeCCHHHHHHHHHhc-------------------ccCCCchH
Q 011801 244 TSVAEVIQEMDCNRDLIHIIYSLSKDM-GLPGFRVGIVYSFNDTVVNCGRKMS-------------------SFGLVSSQ 303 (477)
Q Consensus 244 ~s~~~~~~~~~~~~~~viiv~SlSK~~-g~~G~RvG~i~~~~~~i~~~~~~~~-------------------~~~~vs~~ 303 (477)
.++.+ .+..+++.|++|.+ |.+| +||++++++.+........ ...+.+..
T Consensus 175 ~~~~~--------~~~D~~~~s~~K~l~~p~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~ 244 (363)
T TIGR02326 175 IDIAE--------LHIDYLISSANKCIQGVPG--FGFVIARQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTH 244 (363)
T ss_pred cchhh--------cCccEEEecCccccccCCc--ceEEEECHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcHH
Confidence 23222 23447789999987 4445 7999997765543211000 01134556
Q ss_pred HHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecC---CceEEEEeeccchhhccCchHHHHHHHHHH
Q 011801 304 TQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKS---NAGLFFWMDLRHLLKEKTLEGEIALWRTIV 380 (477)
Q Consensus 304 ~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~---~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll 380 (477)
.+.++.+++..-.- +..+++..++++++++++.+.|++.|+.+..+ ..+..+|+.++... .++ ..++.+.+
T Consensus 245 ~~~al~~al~~l~~-~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~v~~~L- 318 (363)
T TIGR02326 245 VVHAFAQALLELEK-EGGVAARHQRYQQNQKTLVAGMRALGFEPLLDDEIQSPIITSFYSPEDP---DYR-FADFYQRL- 318 (363)
T ss_pred HHHHHHHHHHHHHH-hhCHHHHHHHHHHHHHHHHHHHHHcCCeeccCcccCCceEEEEECCCCC---CCC-HHHHHHHH-
Confidence 66665555543210 11245677889999999999999998876543 34556788877421 011 11355554
Q ss_pred HhcCeEEeCCCCCCCCCCCEEEEEe-ccCCHHHHHHHHHHHHHHHh
Q 011801 381 NDVKLNVSPGSSFQCTEPGWFRVCF-ANMDDDTLQVALNRIAAFVQ 425 (477)
Q Consensus 381 ~~~gI~v~pg~~f~~~~~~~~Rl~~-~~~~~e~l~~~l~~l~~~~~ 425 (477)
+++||.++||..+ .+++|||++ +..+.++++.++++|++++.
T Consensus 319 ~~~gi~v~~g~~~---~~~~iRi~~~~~~~~edv~~~l~~l~~~l~ 361 (363)
T TIGR02326 319 KEQGFVIYPGKVS---QVDCFRIGNIGEVDAADITRLLTAIGKAMY 361 (363)
T ss_pred HHCCEEEECCcCC---CCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 5669999999765 247899996 55699999999999998764
No 141
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.94 E-value=5.2e-25 Score=226.16 Aligned_cols=293 Identities=17% Similarity=0.193 Sum_probs=205.5
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHH----hcCCCCeEEEcCCCccc----hHHHHhhhCCcE
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFC----LANPGDAFLVPSPYYAA----FDRDLSWRTGVQ 159 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~----l~~~Gd~vlv~~P~y~~----~~~~~~~~~g~~ 159 (477)
..++|+++|++++. .++++|++|+|+|+++.+++.+ +.++||.|+++++.|++ +...++.. |++
T Consensus 69 ~~~~r~~la~~~~~-------~~~~~v~~t~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~-g~~ 140 (406)
T PRK09295 69 MENVRKQAALFINA-------RSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARV-GAE 140 (406)
T ss_pred HHHHHHHHHHHcCc-------CCCCeEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHc-CcE
Confidence 56899999999862 1578999999999999999876 45899999999988764 33444545 999
Q ss_pred EEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccC
Q 011801 160 IVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFS 239 (477)
Q Consensus 160 ~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~ 239 (477)
++.++.+. ++.+|+++|++++.+ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|+..
T Consensus 141 v~~v~~~~--~~~~d~~~l~~~i~~------~t~lv~l~~~~n~tG~~~~---~~~i~~~~~~~~~~vivD~a~~~g--- 206 (406)
T PRK09295 141 LRVIPLNP--DGTLQLETLPALFDE------RTRLLAITHVSNVLGTENP---LAEMIALAHQHGAKVLVDGAQAVM--- 206 (406)
T ss_pred EEEEecCC--CCCCCHHHHHHhcCC------CcEEEEEecchhcccccCC---HHHHHHHHHHcCCEEEEEcccccC---
Confidence 99998864 457899999988854 7899999999999999999 778888999999999999999732
Q ss_pred CCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHh------------------------c
Q 011801 240 SPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKM------------------------S 295 (477)
Q Consensus 240 ~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~------------------------~ 295 (477)
..+ ..+.+ .+..+++.|++|.+|.+| +||++.+++.+.. +... -
T Consensus 207 ~~~-~~~~~--------~~~D~~~~s~~K~~gp~G--~G~l~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~r~ 274 (406)
T PRK09295 207 HHP-VDVQA--------LDCDFYVFSGHKLYGPTG--IGILYVKEALLQE-MPPWEGGGSMIATVSLTEGTTWAKAPWRF 274 (406)
T ss_pred ccc-cCchh--------cCCCEEEeehhhccCCCC--cEEEEEchHhHhh-CCCcccCCceeeeeecCCccccCCchhhc
Confidence 211 22221 234478899999988666 8999996654322 1100 0
Q ss_pred ccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEecCC--ceEEEEeeccchhhccCchHH
Q 011801 296 SFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLKSN--AGLFFWMDLRHLLKEKTLEGE 372 (477)
Q Consensus 296 ~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~~~--~g~~~~~~l~~~~~~~~~~~e 372 (477)
..++.+.....++..+++--. +.-+++..+++++..+++.+.|.+. |+++..+. .+ .+.+.++.. . .
T Consensus 275 e~GT~~~~~~~~l~~al~~~~--~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~-iv~~~~~~~-~-----~- 344 (406)
T PRK09295 275 EAGTPNTGGIIGLGAALDYVS--ALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLG-VIAFNLGKH-H-----A- 344 (406)
T ss_pred CCCCccHHHHHHHHHHHHHHH--HhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCce-EEEEEECCc-C-----H-
Confidence 012334444444444443211 1123455567777778888888877 67776542 44 344455531 1 1
Q ss_pred HHHHHHHHHhcCeEEeCCCCCCC------CCCCEEEEEeccC-CHHHHHHHHHHHHHHHh
Q 011801 373 IALWRTIVNDVKLNVSPGSSFQC------TEPGWFRVCFANM-DDDTLQVALNRIAAFVQ 425 (477)
Q Consensus 373 ~~l~~~ll~~~gI~v~pg~~f~~------~~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~ 425 (477)
.++.. .+++.||.++.|+.|.. ..++++|+|++.. +++|++.+++.|+++..
T Consensus 345 ~~~~~-~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 345 YDVGS-FLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred HHHHH-HHHhCCeEEeccccchHHHHHHHCCCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Confidence 13433 45788999999986642 1256899999876 88999999999988743
No 142
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.94 E-value=3.7e-25 Score=228.50 Aligned_cols=298 Identities=13% Similarity=0.126 Sum_probs=208.5
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHh----cCCCCeEEEcCCCccc----hHHHHhhhCCcE
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCL----ANPGDAFLVPSPYYAA----FDRDLSWRTGVQ 159 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l----~~~Gd~vlv~~P~y~~----~~~~~~~~~g~~ 159 (477)
+.++|+++|++++. -++++|++|+|+|+++..++..+ .++||.|+++.+.|+. +...++.. |++
T Consensus 78 ~~~~r~~la~~~~~-------~~~~~v~~t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~-g~~ 149 (424)
T PLN02855 78 YELARKKVAAFINA-------STSREIVFTRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKT-GAV 149 (424)
T ss_pred HHHHHHHHHHHcCC-------CCCCEEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHc-CCE
Confidence 56899999999872 13579999999999999998763 5789999999998765 33344545 999
Q ss_pred EEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccC
Q 011801 160 IVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFS 239 (477)
Q Consensus 160 ~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~ 239 (477)
++.++++.. ..++++++++++.+ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|+ ..
T Consensus 150 v~~v~~~~~--~~~~~~~l~~~i~~------~t~lv~i~~~~n~tG~~~~---~~~I~~l~~~~g~~vivD~a~~---~g 215 (424)
T PLN02855 150 LKFVGLTPD--EVLDVEQLKELLSE------KTKLVATHHVSNVLGSILP---VEDIVHWAHAVGAKVLVDACQS---VP 215 (424)
T ss_pred EEEEecCCC--CCcCHHHHHHHhcc------CceEEEEeCccccccccCC---HHHHHHHHHHcCCEEEEEhhhh---cC
Confidence 999998643 35889999998864 7899999999999999999 6788889999999999999996 22
Q ss_pred CCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhc-----------------------c
Q 011801 240 SPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMS-----------------------S 296 (477)
Q Consensus 240 ~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~-----------------------~ 296 (477)
..+ ..+. ..+..+++.|++|.+|.+| +||++++++.+.. +.... .
T Consensus 216 ~~~-~~~~--------~~~~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~-~~p~~~g~~~~~~~~~~~~~~~~~~~r~e 283 (424)
T PLN02855 216 HMP-VDVQ--------TLGADFLVASSHKMCGPTG--IGFLWGKSDLLES-MPPFLGGGEMISDVFLDHSTYAPPPSRFE 283 (424)
T ss_pred CcC-CCch--------hcCCCEEEeecccccCCCc--cEEEEEchhhhhc-CCCEecCCCceeeeecCccccCCChhhcc
Confidence 222 2222 1233477899999887555 8999997654332 21110 0
Q ss_pred cCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEecCC------ceEEEEeeccchhhccCc
Q 011801 297 FGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLKSN------AGLFFWMDLRHLLKEKTL 369 (477)
Q Consensus 297 ~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~~~------~g~~~~~~l~~~~~~~~~ 369 (477)
.++.+.....++..+++.-. +..+++.+++..+..+++.+.|+++ |+++..+. .+.++.+.++.. .
T Consensus 284 ~GT~~~~~~~~l~~al~~~~--~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~~~-~---- 356 (424)
T PLN02855 284 AGTPAIGEAIGLGAAIDYLS--EIGMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFNVEGI-H---- 356 (424)
T ss_pred CCChHHHHHHHHHHHHHHHH--HhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccccCcccEEEEEECCc-C----
Confidence 11222233334444443110 1134566677777888888888877 77777432 124566666531 1
Q ss_pred hHHHHHHHHHHHhcCeEEeCCCCCCC------CCCCEEEEEeccC-CHHHHHHHHHHHHHHHhhhh
Q 011801 370 EGEIALWRTIVNDVKLNVSPGSSFQC------TEPGWFRVCFANM-DDDTLQVALNRIAAFVQQDK 428 (477)
Q Consensus 370 ~~e~~l~~~ll~~~gI~v~pg~~f~~------~~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~~~~ 428 (477)
. .++.+.|.+++||.++.|..|.. .-++++|+|++.. ++++++.+++.|+++++..+
T Consensus 357 -~-~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt~~di~~l~~~l~~~~~~~~ 420 (424)
T PLN02855 357 -P-TDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARASLYFYNTKEEVDAFIHALKDTIAFFS 420 (424)
T ss_pred -H-HHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEEeccCCCHHHHHHHHHHHHHHHHHHH
Confidence 1 13555555555999999876532 1246899999876 89999999999999987644
No 143
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.94 E-value=3.6e-25 Score=222.37 Aligned_cols=317 Identities=15% Similarity=0.132 Sum_probs=222.4
Q ss_pred ccHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHH
Q 011801 50 LCFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMF 129 (477)
Q Consensus 50 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~ 129 (477)
.++..+.+++...-+. ....|....+..++++++++++.+..|. +.+++++++|+|+|+|+.+++.
T Consensus 10 ~~~~~~~~~~~~~~n~------------~~~~y~~~~~~~~le~~~~~~~~~~~g~--~~~~~~~~~t~ggt~a~~~al~ 75 (345)
T cd06450 10 DPPALLLEMLTSAKNA------------IDFTWDESPAATEMEAEVVNWLAKLFGL--PSEDADGVFTSGGSESNLLALL 75 (345)
T ss_pred cHHHHHHHHHHHhcCC------------CCcccccCchhHHHHHHHHHHHHHHhCC--CCCCCCEEEeCChhHHHHHHHH
Confidence 3455666766654321 1234777788999999999999888773 2245689999999999999998
Q ss_pred HhcC------------C--CCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEE
Q 011801 130 CLAN------------P--GDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGL 195 (477)
Q Consensus 130 ~l~~------------~--Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~v 195 (477)
++.. + ++.|+++.++|..+...+... |.+++.++++++ +.+|+++|++++++...++.++++|
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~~-g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~~~~~~v 152 (345)
T cd06450 76 AARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAAYL-DVKVRLVPVDED--GRMDPEALEAAIDEDKAEGLNPIMV 152 (345)
T ss_pred HHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHHHHH-hcCeEEeeeCCC--CCcCHHHHHHHHHHHHHCCCCcEEE
Confidence 8742 2 347888999999888888877 999999998753 4899999999998765566678889
Q ss_pred EEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCc
Q 011801 196 IITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGF 275 (477)
Q Consensus 196 ii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~ 275 (477)
++++|+||||.+.+ +++|.++|+++|+++++|++|+...+........ ... ..+...+..|++|.++ ++.
T Consensus 153 ~~~~~~~~tG~~~~---~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~---~~~---~~~~d~~~~s~~K~l~-~p~ 222 (345)
T cd06450 153 VATAGTTDTGAIDP---LEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHL---DFG---IERVDSISVDPHKYGL-VPL 222 (345)
T ss_pred EEecccCCCCCCCC---HHHHHHHHHHhCCeEEEechhhHHHhhChhhHHH---hcC---ccccCEEEEchhHhhC-CCc
Confidence 99999999999866 8889999999999999999998654322111111 000 1133456679999775 777
Q ss_pred eEEEEEeCCHHHHHHHHHhcccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEec-CCce
Q 011801 276 RVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLK-SNAG 353 (477)
Q Consensus 276 RvG~i~~~~~~i~~~~~~~~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~-~~~g 353 (477)
++|+++.+ ...+.++..++.... +++..+++.+.++++.+.|.+. ++++.. +..+
T Consensus 223 g~g~~~~~------------------~~~~~~~l~~l~~~g-----~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~ 279 (345)
T cd06450 223 GCSAVLVR------------------ALKLWATLRRFGRDG-----YGEHIDRIVDLAKYLAELIRADPGFELLGEPNLS 279 (345)
T ss_pred chHHHHHH------------------HHHHHHHHHHHhHHH-----HHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcee
Confidence 88987663 444555555554433 4566677778888999999887 676654 4555
Q ss_pred EEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEecc-C-CHHHHHHHHHHHHH
Q 011801 354 LFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFAN-M-DDDTLQVALNRIAA 422 (477)
Q Consensus 354 ~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~-~-~~e~l~~~l~~l~~ 422 (477)
+ +.+.++... ..... ..++.+.+. +.|+.+.++..+. .++++|+++.. . ++++++++++.|++
T Consensus 280 i-v~f~~~~~~-~~~~~-~~~i~~~L~-~~g~~~~~~~~~~--~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 280 L-VCFRLKPSV-KLDEL-NYDLSDRLN-ERGGWHVPATTLG--GPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred E-EEEEECCcc-hhhHH-HHHHHHHHH-hcCCEEEEeeEEC--CeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 4 444554310 00011 124555554 5566555554443 46799999986 3 89999999999875
No 144
>PRK07179 hypothetical protein; Provisional
Probab=99.94 E-value=1.8e-24 Score=222.21 Aligned_cols=293 Identities=16% Similarity=0.157 Sum_probs=200.7
Q ss_pred CcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEecc
Q 011801 87 GLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCD 166 (477)
Q Consensus 87 G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~ 166 (477)
...+|++.+|++++ .+.+++++|+++|+..++.++..+||.|++..+.|......++.. |+++++++.
T Consensus 100 ~~~~le~~la~~~g----------~~~~~~~~sG~~An~~~l~~l~~~g~~v~~~~~~h~s~~~~~~~~-g~~~~~~~~- 167 (407)
T PRK07179 100 PKPQFEKKLAAFTG----------FESCLLCQSGWAANVGLLQTIADPNTPVYIDFFAHMSLWEGVRAA-GAQAHPFRH- 167 (407)
T ss_pred HHHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHHHhCCCCCEEEEECCcCHHHHHHHHHC-CCeEEEecC-
Confidence 45788999999986 246788999999999999999999999999999888777666655 888776642
Q ss_pred CCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccH
Q 011801 167 ISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSV 246 (477)
Q Consensus 167 ~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~ 246 (477)
.|+++|++++++. ++++|++++|+||||.+.+ +++|.++|+++|+++|+||+|+...++ ....+.
T Consensus 168 ------~d~~~l~~~l~~~-----~~~lV~v~~v~n~tG~i~p---l~~I~~l~~~~~~~livDea~~~g~~g-~~g~g~ 232 (407)
T PRK07179 168 ------NDVDHLRRQIERH-----GPGIIVVDSVYSTTGTIAP---LADIVDIAEEFGCVLVVDESHSLGTHG-PQGAGL 232 (407)
T ss_pred ------CCHHHHHHHHHhc-----CCeEEEECCCCCCCCcccc---HHHHHHHHHHcCCEEEEECcccccCcC-CCCCch
Confidence 3789999988642 4678888999999999999 778888999999999999999743332 221222
Q ss_pred HHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhcc---cCC-CchHHHHHHHHhcCChhhHHHHH
Q 011801 247 AEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSS---FGL-VSSQTQYLLASMLSDDEFVDNFL 322 (477)
Q Consensus 247 ~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~~---~~~-vs~~~q~~~~~~L~~~~~~~~~~ 322 (477)
.... +......+++.|+||.+| + |+||++++++ +.+.+..... +.. .++....++.+.++... ..
T Consensus 233 ~~~~---~~~~~vdi~~~S~sK~~g-~--~~G~l~~~~~-~~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~~----~~ 301 (407)
T PRK07179 233 VAEL---GLTSRVHFITASLAKAFA-G--RAGIITCPRE-LAEYVPFVSYPAIFSSTLLPHEIAGLEATLEVIE----SA 301 (407)
T ss_pred HHhc---CCCCCCCEEEeechHhhh-c--cCeEEEeCHH-HHHHHHHhCcCeeeCCCCCHHHHHHHHHHHHHHh----cC
Confidence 2111 111223578899999996 2 6999998654 4444443321 221 12222222323332211 12
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCC-CCCCCCCEE
Q 011801 323 VETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSS-FQCTEPGWF 401 (477)
Q Consensus 323 ~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~-f~~~~~~~~ 401 (477)
.+.+++++++++++.+.|.++|+++. +. +.++++.++... .. +.+...+.++||.+..-.. .....++++
T Consensus 302 ~~~~~~l~~~~~~l~~~L~~~g~~v~-~~-~~i~~l~~~~~~------~~-~~~~~~L~~~GI~~~~~~~p~~~~~~~~l 372 (407)
T PRK07179 302 DDRRARLHANARFLREGLSELGYNIR-SE-SQIIALETGSER------NT-EVLRDALEERNVFGAVFCAPATPKNRNLI 372 (407)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCC-CC-CCEEEEEeCCHH------HH-HHHHHHHHHCCceEeeecCCCCCCCCceE
Confidence 34567888999999999999888766 33 467788765311 11 2333445567997431110 011235789
Q ss_pred EEEeccC-CHHHHHHHHHHHHHHHhh
Q 011801 402 RVCFANM-DDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 402 Rl~~~~~-~~e~l~~~l~~l~~~~~~ 426 (477)
||+++.. +++++++++++|++++++
T Consensus 373 Ris~~~~~t~edi~~~~~~l~~~~~~ 398 (407)
T PRK07179 373 RLSLNADLTASDLDRVLEVCREARDE 398 (407)
T ss_pred EEEECCCCCHHHHHHHHHHHHHHHHh
Confidence 9999764 999999999999999876
No 145
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.94 E-value=2.3e-24 Score=218.56 Aligned_cols=301 Identities=15% Similarity=0.157 Sum_probs=205.5
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccch--HHHHhhhCCcEEEEEec
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAF--DRDLSWRTGVQIVPVHC 165 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~--~~~~~~~~g~~~~~v~~ 165 (477)
..++|+.++++++ .+-+++.|++++|+++++..++..+..+||.|+++.++|.+. ...++.. |++++.+++
T Consensus 39 ~~~~~~~l~~l~~------~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~~~~~~~~~~~~~~~~~-g~~~~~i~~ 111 (368)
T PRK13479 39 TASVRAKLVAIAT------GEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVPDNGAYGARIAQIAEYL-GIAHVVLDT 111 (368)
T ss_pred HHHHHHHHHHHhC------CCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCCchHHHHHHHHHHc-CCcEEEEEC
Confidence 5788888888876 111235688999999999999999999999999998877654 3555655 999999997
Q ss_pred cCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCccc
Q 011801 166 DISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTS 245 (477)
Q Consensus 166 ~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s 245 (477)
+. ++.+|++++++++++ +.++++|++++|+||||...+ +++|.++|+++|+++|+|++++ |+..+ .+
T Consensus 112 ~~--~~~~d~~~l~~~l~~----~~~~~~v~~~~~~~~tG~~~~---~~~i~~l~~~~~~~livDa~~~---~g~~~-~~ 178 (368)
T PRK13479 112 GE--DEPPDAAEVEAALAA----DPRITHVALVHCETTTGILNP---LDEIAAVAKRHGKRLIVDAMSS---FGAIP-ID 178 (368)
T ss_pred CC--CCCCCHHHHHHHHHh----CCCCcEEEEEcccCccccccC---HHHHHHHHHHcCCEEEEEcccc---cCCcc-cc
Confidence 63 456899999998864 236778999999999999999 7788888999999999997664 44332 22
Q ss_pred HHHhhhhccCCCCcEEEEecCCccc-CCCCceEEEEEeCCHHHHHHHHHhcc------------------cCCCchHHHH
Q 011801 246 VAEVIQEMDCNRDLIHIIYSLSKDM-GLPGFRVGIVYSFNDTVVNCGRKMSS------------------FGLVSSQTQY 306 (477)
Q Consensus 246 ~~~~~~~~~~~~~~viiv~SlSK~~-g~~G~RvG~i~~~~~~i~~~~~~~~~------------------~~~vs~~~q~ 306 (477)
+.. .+..+++.|++|.+ |.+| +||++++++.+........+ ..+.+...+.
T Consensus 179 ~~~--------~~~d~~v~s~~K~l~g~~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~ 248 (368)
T PRK13479 179 IAE--------LGIDALISSANKCIEGVPG--FGFVIARRSELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTPPTHVVA 248 (368)
T ss_pred ccc--------cCceEEEecCccccccCCC--ceEEEECHHHHHHhhcCCCCeeecHHHHHhhhcccCCCCCCCcHHHHH
Confidence 221 13346778999975 6677 69999976554332211111 0134444444
Q ss_pred HHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCC---ceEEEEeeccchhhccCchHHHHHHHHHHHhc
Q 011801 307 LLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSN---AGLFFWMDLRHLLKEKTLEGEIALWRTIVNDV 383 (477)
Q Consensus 307 ~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~---~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~ 383 (477)
++...+..-.- +..+++..+++.++++.+.+.|++.|+++..+. .+..+.+.++.. ...+. .++.+.+.+ .
T Consensus 249 ~l~~al~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~l~~~L~~-~ 322 (368)
T PRK13479 249 AFYQALLELEE-EGGVPARGARYANNQRTLVAGMRALGFEPLLDAEIQSPIIVTFHAPAD---PAYDF-KEFYERLKE-Q 322 (368)
T ss_pred HHHHHHHHHHH-hhCHHHHHHHHHHHHHHHHHHHHHcCCcccCCchhcCceEEEEECCCC---CCcCH-HHHHHHHHH-C
Confidence 44444432110 112456667888999999999999998765332 111122223321 01111 246666654 5
Q ss_pred CeEEeCCCCCCCCCCCEEEEEe-ccCCHHHHHHHHHHHHHHHhhh
Q 011801 384 KLNVSPGSSFQCTEPGWFRVCF-ANMDDDTLQVALNRIAAFVQQD 427 (477)
Q Consensus 384 gI~v~pg~~f~~~~~~~~Rl~~-~~~~~e~l~~~l~~l~~~~~~~ 427 (477)
||.|++|..+ ..+++|++. +..++++++.+++.|++++++.
T Consensus 323 gi~v~~g~~~---~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~ 364 (368)
T PRK13479 323 GFVIYPGKLT---QVDTFRIGCIGDVDAADIRRLVAAIAEALYWM 364 (368)
T ss_pred CEEEecCCCC---CCCEEEEecCCCCCHHHHHHHHHHHHHHHHHc
Confidence 9999998644 246899985 6569999999999999998763
No 146
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.94 E-value=4e-24 Score=218.04 Aligned_cols=306 Identities=15% Similarity=0.162 Sum_probs=206.1
Q ss_pred CcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEecc
Q 011801 87 GLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCD 166 (477)
Q Consensus 87 G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~ 166 (477)
...++|+.+|++++ .+++++++|+++++.+++.+++++||.|+++.++|......++.. |++++.++.+
T Consensus 64 ~~~~l~~~lA~~~g----------~~~~~~~~g~t~a~~~al~~l~~~gd~Vlv~~~~h~s~~~~~~~~-G~~~~~v~~~ 132 (387)
T PRK09331 64 PIADFHEDLAEFLG----------MDEARVTHGAREGKFAVMHSLCKKGDYVVLDGLAHYTSYVAAERA-GLNVREVPKT 132 (387)
T ss_pred HHHHHHHHHHHHhC----------CCcEEEeCCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHc-CCEEEEEeCc
Confidence 47899999999987 246888999999999999999999999999999987776666766 9999999974
Q ss_pred CCCCcccCHHHHHHHHHHHH-HhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCccc
Q 011801 167 ISNNFKITREALEAAYERAQ-EASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTS 245 (477)
Q Consensus 167 ~~~~f~i~~~~l~~~~~~~~-~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s 245 (477)
.+.++.+|++++++++++.. ..++++++|++++|+||||...+ +++|.++|+++|+++|+|++|+. +.-+ .+
T Consensus 133 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~---l~~I~~la~~~g~~livD~a~~~---g~~~-~~ 205 (387)
T PRK09331 133 GYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLAD---AKKVAKVAHEYGIPFLLNGAYTV---GRMP-VD 205 (387)
T ss_pred cCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCccccc---HHHHHHHHHHcCCEEEEECCccc---CCcC-CC
Confidence 23467899999999997531 12347899999999999999888 88899999999999999999973 2211 12
Q ss_pred HHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhcccC------CCchHHHHHHHHhcCChhhHH
Q 011801 246 VAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSFG------LVSSQTQYLLASMLSDDEFVD 319 (477)
Q Consensus 246 ~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~~~~------~vs~~~q~~~~~~L~~~~~~~ 319 (477)
... .+..+++.|++|+++ .+.|+||++++++.+....+...+|. ..++..+..+..++..-+...
T Consensus 206 ~~~--------~g~D~~~~s~~K~l~-~~~~~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~~ 276 (387)
T PRK09331 206 GKK--------LGADFIVGSGHKSMA-ASAPSGVLATTEEYADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPHVV 276 (387)
T ss_pred HHH--------cCCCEEEeeCccccc-CCCCEEEEEECHHHHhhcccccCCCcccceeeeceecCchHHHHHHHHHHHHH
Confidence 211 234578899999998 56699999996654443323222111 000111111111111111112
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhC-CCeEec--CCceEEEEeeccchhhc--cCchHHHHHHHHHHHhcCeEEeCCCCCC
Q 011801 320 NFLVETSKRLAKRHHNFTKGLEQV-GINCLK--SNAGLFFWMDLRHLLKE--KTLEGEIALWRTIVNDVKLNVSPGSSFQ 394 (477)
Q Consensus 320 ~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~--~~~g~~~~~~l~~~~~~--~~~~~e~~l~~~ll~~~gI~v~pg~~f~ 394 (477)
+.+. ..++..++.+++.+.|.++ |+++.. +....++.++.+..... .......++.+.| .++||...+.
T Consensus 277 ~~~~-~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L-~~~gI~~~~~---- 350 (387)
T PRK09331 277 ERVK-RWDEEVKKARWFVDELEKIEGFKQLGEKPRNHDLMKFETPSFDEIAKKHKRRGFFLYEEL-KKRGIHGIKP---- 350 (387)
T ss_pred HHHH-HHHHHHHHHHHHHHHHhcCCCEEEeccCcCcCCeEEEeCCchhHHhhhccccchhHHHHH-HHcCceEEcc----
Confidence 2232 3344556677889999999 888773 22334566666621110 0001112355555 4669984332
Q ss_pred CCCCCEEEEEeccCCHHHHHHHHHHHHHHHhh
Q 011801 395 CTEPGWFRVCFANMDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 395 ~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~ 426 (477)
.....+|+.....++++++.+++.|++++++
T Consensus 351 -~~~~i~ri~~~g~t~~di~~l~~aL~~i~~~ 381 (387)
T PRK09331 351 -GATKEFKLSTYGLTWEQVEYVADAFKEIAEK 381 (387)
T ss_pred -CCceEEEEEeccCCHHHHHHHHHHHHHHHHh
Confidence 1244577777456999999999999998875
No 147
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.94 E-value=8.9e-25 Score=223.88 Aligned_cols=333 Identities=14% Similarity=0.122 Sum_probs=216.9
Q ss_pred CCCCccccccccc--ccccc--HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCcc
Q 011801 34 TQNPGGVIQLGLA--ENQLC--FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTF 109 (477)
Q Consensus 34 ~~~~~~~i~l~~~--~n~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~ 109 (477)
+.+.+.+||+..+ .+.++ .+.+.+.+.+.-+. .+ .....|+...+ .+|.+.++++++ . .
T Consensus 39 d~dg~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~-----~~----~~~~~~~~~~~-~~la~~l~~~~~------~-~ 101 (398)
T PRK03244 39 DVDGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLAT-----LG----HVSNLFATEPQ-IALAERLVELLG------A-P 101 (398)
T ss_pred ECCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHh-----cc----CccCccCCHHH-HHHHHHHHHhCC------C-C
Confidence 3445668888654 34443 35566655542110 00 00123544332 455555555543 1 1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCC-CeEEEcCCCccchHHHHhhhCCcE------------EEEEeccCCCCcccCHH
Q 011801 110 DPDRIVMGGGATGANELIMFCLANPG-DAFLVPSPYYAAFDRDLSWRTGVQ------------IVPVHCDISNNFKITRE 176 (477)
Q Consensus 110 ~~~~i~~t~G~t~al~~i~~~l~~~G-d~vlv~~P~y~~~~~~~~~~~g~~------------~~~v~~~~~~~f~i~~~ 176 (477)
+++++++++|+++|++.+++.+..+| +.|+..+++|+++........|.. +..++. .|++
T Consensus 102 ~~~~v~~~~sgsea~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~ 174 (398)
T PRK03244 102 EGGRVFFCNSGAEANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY-------GDVD 174 (398)
T ss_pred CCCEEEEeCchHHHHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC-------CCHH
Confidence 35799999999999999998765566 567777889988754433222321 222221 2678
Q ss_pred HHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHH-HHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccC
Q 011801 177 ALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDT-LKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDC 255 (477)
Q Consensus 177 ~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~-l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~ 255 (477)
++++++.+ ++++|+++.++||+|.+++.++ +++|.++|+++|+++|+||+|.++...+..+ .. ... +.
T Consensus 175 ~l~~~~~~------~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~-~~-~~~---~~ 243 (398)
T PRK03244 175 ALAAAVDD------DTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWF-AH-QHD---GV 243 (398)
T ss_pred HHHHhhcC------CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHH-hh-hhh---CC
Confidence 88887742 7889999988999999987665 9999999999999999999998754443322 11 111 11
Q ss_pred CCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHH--hcccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHH
Q 011801 256 NRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRK--MSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRH 333 (477)
Q Consensus 256 ~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~--~~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~ 333 (477)
.++ +.+|||.+| +|+|+||++++++ +.+.+.. .......++++|.++.+.|+.-+ + .+..++++++.
T Consensus 244 ~pD----i~t~sK~l~-~G~~ig~~~~~~~-~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~--~---~~~~~~~~~~~ 312 (398)
T PRK03244 244 TPD----VVTLAKGLG-GGLPIGACLAFGP-AADLLTPGLHGSTFGGNPVACAAALAVLDTIA--S---EGLLENAERLG 312 (398)
T ss_pred CCC----EEEEchhhh-CCcccEEEEEcHH-HHhhccCCCCcCCCCCCHHHHHHHHHHHHHHH--h---ccHHHHHHHHH
Confidence 233 238899999 9999999999665 4444432 22223477888888888875211 0 12234555666
Q ss_pred HHHHHHHhhCCCeE--ecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEecc-CCH
Q 011801 334 HNFTKGLEQVGINC--LKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFAN-MDD 410 (477)
Q Consensus 334 ~~l~~~L~~~gi~~--~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~-~~~ 410 (477)
+++.+.|++++... .....|+++|+.++.. ...++.+.++ ++||.+.|. .++.+|++++. .++
T Consensus 313 ~~l~~~L~~~~~~~~~~v~g~g~~~~i~~~~~-------~~~~~~~~l~-~~Gv~~~~~------~~~~iR~~p~~~~t~ 378 (398)
T PRK03244 313 EQLRAGIEALGHPLVDHVRGRGLLLGIVLTAP-------VAKAVEAAAR-EAGFLVNAV------APDVIRLAPPLIITD 378 (398)
T ss_pred HHHHHHHHhcCCCceeeEeeccEEEEEEEecc-------HHHHHHHHHH-HCCeEEeec------CCCEEEEECCCcCCH
Confidence 77888888765421 1224678999998631 1124556665 459999874 24689999876 599
Q ss_pred HHHHHHHHHHHHHHhh
Q 011801 411 DTLQVALNRIAAFVQQ 426 (477)
Q Consensus 411 e~l~~~l~~l~~~~~~ 426 (477)
+++++++++|++++++
T Consensus 379 ~~i~~~~~~l~~~l~~ 394 (398)
T PRK03244 379 AQVDAFVAALPAILDA 394 (398)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999999975
No 148
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.94 E-value=2.2e-24 Score=220.26 Aligned_cols=281 Identities=15% Similarity=0.163 Sum_probs=189.8
Q ss_pred CCcEEEeCChHHHHHHHHHHh----cCCCC----eEEEcCCCccchHHHHhhhCCcEEEEEec-cCCCCcc----cCHHH
Q 011801 111 PDRIVMGGGATGANELIMFCL----ANPGD----AFLVPSPYYAAFDRDLSWRTGVQIVPVHC-DISNNFK----ITREA 177 (477)
Q Consensus 111 ~~~i~~t~G~t~al~~i~~~l----~~~Gd----~vlv~~P~y~~~~~~~~~~~g~~~~~v~~-~~~~~f~----i~~~~ 177 (477)
.+++++++|+++|++.+++++ .++|| +|++.++.|+++........+.....-.. ....++. .|+++
T Consensus 88 ~~~v~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 167 (389)
T PRK01278 88 ADKVFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEA 167 (389)
T ss_pred CCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHH
Confidence 468999999999999998876 45676 89999999998876554432322111000 0011222 47889
Q ss_pred HHHHHHHHHHhCCCeeEEEEeCCCCCcc-cCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCC
Q 011801 178 LEAAYERAQEASINIKGLIITNPSNPLG-TTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCN 256 (477)
Q Consensus 178 l~~~~~~~~~~~~~~k~vii~nP~NPtG-~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~ 256 (477)
+++++++ ++++|+++.++||+| .+++.+.+++|.++|++||+++|+||+|.++.+.+..+. . +.. +..
T Consensus 168 l~~~l~~------~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~-~-~~~---~~~ 236 (389)
T PRK01278 168 LKAAITP------NTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFA-H-EWA---GVT 236 (389)
T ss_pred HHHhhCC------CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccee-e-ccc---CCC
Confidence 9888753 788888887778888 789999999999999999999999999998655543221 1 111 112
Q ss_pred CCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhc--ccCCCchHHHHHHHHhcC---ChhhHHHHHHHHHHHHHH
Q 011801 257 RDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMS--SFGLVSSQTQYLLASMLS---DDEFVDNFLVETSKRLAK 331 (477)
Q Consensus 257 ~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~--~~~~vs~~~q~~~~~~L~---~~~~~~~~~~~~~~~l~~ 331 (477)
++ +.||||.++ +|+|+||++++++ +.+.+.... .....+++.|.++.+.|+ +.++ .+++.+..+++++
T Consensus 237 pd----i~t~sK~l~-~G~~ig~~~~~~~-~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~-~~~~~~~~~~l~~ 309 (389)
T PRK01278 237 PD----IMAVAKGIG-GGFPLGACLATEE-AAKGMTPGTHGSTYGGNPLAMAVGNAVLDVILAPGF-LDNVQRMGLYLKQ 309 (389)
T ss_pred CC----EEEEehhcc-CCcceEEEEEcHH-HHhccCCCCCCCCCCccHHHHHHHHHHHHHHhhhHH-HHHHHHHHHHHHH
Confidence 23 348999998 9999999999665 433332221 112367788888766664 2333 3445555556665
Q ss_pred HHHHHHHHHhhCCCeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEecc-CCH
Q 011801 332 RHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFAN-MDD 410 (477)
Q Consensus 332 r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~-~~~ 410 (477)
+.+.+.+.+.+. +.... ..|+++|++++. + ..+++..++++ ||.+.|+. ++++|++++. .++
T Consensus 310 ~l~~l~~~~~~~-~~~v~-g~G~~~~i~~~~--~------~~~~~~~l~~~-GV~~~p~~------~~~lR~~p~~~~~~ 372 (389)
T PRK01278 310 KLEGLVDRFPDV-IEEVR-GKGLLLGLKCVV--P------NRDLVQALRDE-GLLTVGAG------DNVVRLLPPLIITE 372 (389)
T ss_pred HHHHHHhhCCCc-eeeEe-cccEEEEEEEec--C------HHHHHHHHHHC-CeEEeecC------CCEEEEeCCcccCH
Confidence 555443322111 22223 357888988752 1 23577777766 99999873 5789999864 599
Q ss_pred HHHHHHHHHHHHHHhh
Q 011801 411 DTLQVALNRIAAFVQQ 426 (477)
Q Consensus 411 e~l~~~l~~l~~~~~~ 426 (477)
+++++++++|++++++
T Consensus 373 ~~i~~~l~~l~~~l~~ 388 (389)
T PRK01278 373 EEIDEALERLERAAES 388 (389)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998864
No 149
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.94 E-value=2.4e-24 Score=220.62 Aligned_cols=290 Identities=17% Similarity=0.207 Sum_probs=197.9
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHh---cCCCCeEEEcCCCccchH----HHHhhhCCcEE
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCL---ANPGDAFLVPSPYYAAFD----RDLSWRTGVQI 160 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l---~~~Gd~vlv~~P~y~~~~----~~~~~~~g~~~ 160 (477)
..++|++++++++ .++++|++++|+++++..++.++ .+|||+|++++|.|++.. ..++.. |+++
T Consensus 62 ~~~l~~~ia~~~~--------~~~~~v~~~~~~t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~-g~~~ 132 (397)
T TIGR01976 62 VDDAREAVADLLN--------ADPPEVVFGANATSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERA-GAKV 132 (397)
T ss_pred HHHHHHHHHHHcC--------CCCCeEEEeCCHHHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhc-CCEE
Confidence 3588888888876 45667999999999999887775 689999999999887643 334445 9999
Q ss_pred EEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCC
Q 011801 161 VPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSS 240 (477)
Q Consensus 161 ~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~ 240 (477)
+.++++.. ++.++++++++++.+ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|+++.. +
T Consensus 133 ~~~~~~~~-~~~~~~~~l~~~i~~------~~~lv~i~~~~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~----~ 198 (397)
T TIGR01976 133 KWARVDEA-TGELHPDDLASLLSP------RTRLVAVTAASNTLGSIVD---LAAITELVHAAGALVVVDAVHYA----P 198 (397)
T ss_pred EEEecccc-CCCcCHHHHHHhcCC------CceEEEEeCCCCCCCccCC---HHHHHHHHHHcCCEEEEehhhhc----c
Confidence 99987642 467899999998853 7899999999999999998 88888899999999999999852 1
Q ss_pred CCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhc-cc-----------CCCchHH---H
Q 011801 241 PKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMS-SF-----------GLVSSQT---Q 305 (477)
Q Consensus 241 ~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~-~~-----------~~vs~~~---q 305 (477)
.....+.+ .+..+++.|++|.+| .|+|+++++++.+. .+.... .+ ++.+... .
T Consensus 199 ~~~~~~~~--------~~~d~~~~s~~K~~g---~~~G~l~~~~~~~~-~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l 266 (397)
T TIGR01976 199 HGLIDVQA--------TGADFLTCSAYKFFG---PHMGILWGRPELLM-NLPPYKLTFSYDTGPERFELGTPQYELLAGV 266 (397)
T ss_pred ccCCCHHH--------cCCCEEEEechhhcC---CceEEEEEcHHHHh-hCCCccccCccCCCcchhcCCCCCHHHHHHH
Confidence 11122221 233466789999885 36999999665433 222211 11 1112111 2
Q ss_pred HHHHHhcCChh------h---HHHHHHHHHHHHHHHHHHHHHHHhhCC-CeEecC----CceEEEEeeccchhhccCchH
Q 011801 306 YLLASMLSDDE------F---VDNFLVETSKRLAKRHHNFTKGLEQVG-INCLKS----NAGLFFWMDLRHLLKEKTLEG 371 (477)
Q Consensus 306 ~~~~~~L~~~~------~---~~~~~~~~~~~l~~r~~~l~~~L~~~g-i~~~~~----~~g~~~~~~l~~~~~~~~~~~ 371 (477)
..+..++.+.+ . +..++++..++..+..+++.+.|++++ +++..+ ..+.++.+.++.. .
T Consensus 267 ~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------ 339 (397)
T TIGR01976 267 VAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVPTVSFTVHGL-P------ 339 (397)
T ss_pred HHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCceEEEEeCCc-C------
Confidence 22223332211 0 011256667777788888999998874 777654 1234666665521 1
Q ss_pred HHHHHHHHHHhcCeEEeCCCCCCC---------CCCCEEEEEeccC-CHHHHHHHHHHH
Q 011801 372 EIALWRTIVNDVKLNVSPGSSFQC---------TEPGWFRVCFANM-DDDTLQVALNRI 420 (477)
Q Consensus 372 e~~l~~~ll~~~gI~v~pg~~f~~---------~~~~~~Rl~~~~~-~~e~l~~~l~~l 420 (477)
..++.+.| .++||.|+.|+.|.. ...+++|||+... ++++++.+++.|
T Consensus 340 ~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 340 PQRVVRRL-ADQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred HHHHHHHH-HHCCeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 11455555 556999998877641 1346899999765 899999998764
No 150
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.94 E-value=1.8e-24 Score=219.72 Aligned_cols=289 Identities=17% Similarity=0.223 Sum_probs=200.3
Q ss_pred CcHHHHHHHHHHHhcccCCCCccC-CCcEEEeCChHHHHHHHHHHhcC---CCCeEEEcCCCccchH----HHHhhhCCc
Q 011801 87 GLPEFRQAVAKFMGKGRGGRVTFD-PDRIVMGGGATGANELIMFCLAN---PGDAFLVPSPYYAAFD----RDLSWRTGV 158 (477)
Q Consensus 87 G~~~lr~aia~~~~~~~g~~~~~~-~~~i~~t~G~t~al~~i~~~l~~---~Gd~vlv~~P~y~~~~----~~~~~~~g~ 158 (477)
...++|+.++++++ .+ +++|++|+|+++++.+++..+.. +||.|+++.+.|+... ..++.. |+
T Consensus 44 ~~~~~~~~la~~~~--------~~~~~~v~~~~g~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~-g~ 114 (373)
T cd06453 44 AYEAAREKVARFIN--------APSPDEIIFTRNTTEAINLVAYGLGRANKPGDEIVTSVMEHHSNIVPWQQLAERT-GA 114 (373)
T ss_pred HHHHHHHHHHHHhC--------CCCCCeEEEeCCHHHHHHHHHHHhhhcCCCCCEEEECcchhHHHHHHHHHHHhhc-Cc
Confidence 35688899999986 33 67999999999999999999877 8999999999998742 233344 99
Q ss_pred EEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEeccccccccc
Q 011801 159 QIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVF 238 (477)
Q Consensus 159 ~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~ 238 (477)
+++.++++ .++.+|++++++++.+ ++++|++++|+||||.+.+ +++|+++|+++|++||+|++|+..
T Consensus 115 ~~~~v~~~--~~~~~d~~~l~~~l~~------~~~~v~~~~~~~~tG~~~~---~~~i~~~~~~~~~~li~D~a~~~~-- 181 (373)
T cd06453 115 KLKVVPVD--DDGQLDLEALEKLLTE------RTKLVAVTHVSNVLGTINP---VKEIGEIAHEAGVPVLVDGAQSAG-- 181 (373)
T ss_pred EEEEeecC--CCCCcCHHHHHHHhcC------CceEEEEeCcccccCCcCC---HHHHHHHHHHcCCEEEEEhhhhcC--
Confidence 99999886 3567999999998864 7899999999999999999 678888899999999999999732
Q ss_pred CCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhcc---------------------c
Q 011801 239 SSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSS---------------------F 297 (477)
Q Consensus 239 ~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~~---------------------~ 297 (477)
..+ ..+. ..+..+++.|++|.++. .++|+++++++.+.. +..... +
T Consensus 182 -~~~-~~~~--------~~~~d~~~~s~~K~~~~--~g~g~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 248 (373)
T cd06453 182 -HMP-VDVQ--------DLGCDFLAFSGHKMLGP--TGIGVLYGKEELLEE-MPPYGGGGEMIEEVSFEETTYADLPHKF 248 (373)
T ss_pred -cee-eecc--------ccCCCEEEeccccccCC--CCcEEEEEchHHhhc-CCCeecCCCccccccccccccCCCcccc
Confidence 111 1111 11334667899999984 568999996654432 222110 1
Q ss_pred --CCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEecCC--ceEEEEeeccchhhccCchHH
Q 011801 298 --GLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLKSN--AGLFFWMDLRHLLKEKTLEGE 372 (477)
Q Consensus 298 --~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~~~--~g~~~~~~l~~~~~~~~~~~e 372 (477)
++.+.....++...+..-. +.-+++..++.++.++++.+.|.++ |+++..+. .+.++++.++.. + .
T Consensus 249 ~~~t~~~~~~~al~~al~~l~--~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~- 319 (373)
T cd06453 249 EAGTPNIAGAIGLGAAIDYLE--KIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAEDRAGVVSFNLEGI-H-----P- 319 (373)
T ss_pred CCCCCCHHHHHHHHHHHHHHH--HcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCeEEEEECCc-C-----H-
Confidence 1222223333333332111 1123555666777888899999887 67766321 245667776531 1 1
Q ss_pred HHHHHHHHHhcCeEEeCCCCCCC------CCCCEEEEEeccC-CHHHHHHHHHHH
Q 011801 373 IALWRTIVNDVKLNVSPGSSFQC------TEPGWFRVCFANM-DDDTLQVALNRI 420 (477)
Q Consensus 373 ~~l~~~ll~~~gI~v~pg~~f~~------~~~~~~Rl~~~~~-~~e~l~~~l~~l 420 (477)
.++.+.+ .++||.+.+|..|.. ..++++|++++.. ++++++++++.|
T Consensus 320 ~~i~~~l-~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 320 HDVATIL-DQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred HHHHHHH-HHCCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 1344544 457999988875431 2357999999864 899999998764
No 151
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.93 E-value=2.3e-24 Score=217.90 Aligned_cols=295 Identities=16% Similarity=0.202 Sum_probs=201.2
Q ss_pred ccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHH----HHhh
Q 011801 79 IAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDR----DLSW 154 (477)
Q Consensus 79 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~----~~~~ 154 (477)
..+|+++ ...+|++++|++.+ . +..++++|+++|+.+++ .++++||.|+++.|.|++... .++.
T Consensus 46 y~r~~~p-t~~~le~~la~l~g--------~--~~~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~ 113 (366)
T PRK08247 46 YSRTGNP-TRGVLEQAIADLEG--------G--DQGFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKK 113 (366)
T ss_pred ccCCCCc-hHHHHHHHHHHHhC--------C--CcEEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhc
Confidence 4456554 46899999999987 2 23477788889999876 577899999999999987433 3444
Q ss_pred hCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEeccccc
Q 011801 155 RTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYA 234 (477)
Q Consensus 155 ~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~ 234 (477)
. |+++..++. .|++++++++++ ++++|++++|+||+|. ..++++|+++|+++|+++|+|++|+
T Consensus 114 ~-G~~v~~vd~-------~d~~~l~~~i~~------~tklv~le~P~NP~~~---~~dl~~I~~la~~~g~~lIvD~t~~ 176 (366)
T PRK08247 114 W-NVRFVYVNT-------ASLKAIEQAITP------NTKAIFIETPTNPLMQ---ETDIAAIAKIAKKHGLLLIVDNTFY 176 (366)
T ss_pred c-CceEEEECC-------CCHHHHHHhccc------CceEEEEECCCCCCCc---HHHHHHHHHHHHHcCCEEEEECCCc
Confidence 5 999888774 278889888754 7899999999999765 4569999999999999999999996
Q ss_pred ccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCC-CCceEEEEEeCCHHHHHHHHHhccc--CCCchHHHHHHHHh
Q 011801 235 ATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGL-PGFRVGIVYSFNDTVVNCGRKMSSF--GLVSSQTQYLLASM 311 (477)
Q Consensus 235 ~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~-~G~RvG~i~~~~~~i~~~~~~~~~~--~~vs~~~q~~~~~~ 311 (477)
...+.. ++ ..+..++++|+||.++- ++++.|+++++++.+...+...... ..+++..|+++...
T Consensus 177 ~~~~~~----p~---------~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~ 243 (366)
T PRK08247 177 TPVLQR----PL---------EEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNAAGAVLSPFDSWLLIRG 243 (366)
T ss_pred cccccC----ch---------hcCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHHHHhcCCCCChHHHHHHHhc
Confidence 332211 11 12456899999999973 3579999998655555544433222 23567788887776
Q ss_pred cCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeE--ecCCceEEEEeeccchhhccCchHHHHH---HHHHHHhcCe
Q 011801 312 LSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINC--LKSNAGLFFWMDLRHLLKEKTLEGEIAL---WRTIVNDVKL 385 (477)
Q Consensus 312 L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~--~~~~~g~~~~~~l~~~~~~~~~~~e~~l---~~~ll~~~gI 385 (477)
|+.- ..+.++.+++++.+.+.|+++ ++.. .++.+|+|.| .+........+.+...+ +..+.....+
T Consensus 244 l~tl-------~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf-~~~~~~~~~~~~~~l~~~~~~~slg~~~sl 315 (366)
T PRK08247 244 MKTL-------ALRMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSF-RLQDEEWVNPFLKSLKLITFAESLGGVESF 315 (366)
T ss_pred cCcH-------HHHHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEE-EECCHHHHHHHHHcCCcceEccCCCCCceE
Confidence 6532 233445688889999999987 6653 4447888887 56421000000011111 1122233466
Q ss_pred EEeCCCCCCCC-----------CCCEEEEEeccCCHHHHHHHHHHHHHHHhh
Q 011801 386 NVSPGSSFQCT-----------EPGWFRVCFANMDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 386 ~v~pg~~f~~~-----------~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~ 426 (477)
.+.|++.++.. .++.+|++++. |+.+.+++.|.+++++
T Consensus 316 ~~~p~~~~~~~~~~~~r~~~gi~~~~~R~svGl---E~~~dl~~dl~~al~~ 364 (366)
T PRK08247 316 ITYPATQTHADIPEEIRIANGVCNRLLRFSVGI---ENVEDLIADLKQAFKQ 364 (366)
T ss_pred EECCcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence 77788766431 24689999995 5677778888888764
No 152
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.93 E-value=1e-23 Score=216.65 Aligned_cols=300 Identities=14% Similarity=0.132 Sum_probs=201.0
Q ss_pred CCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcC--CCCeEEEcCCCccchHHHHhhhCCcEEEE
Q 011801 85 YHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLAN--PGDAFLVPSPYYAAFDRDLSWRTGVQIVP 162 (477)
Q Consensus 85 ~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~--~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~ 162 (477)
.....+|++++|++++ .++.+++++| ++|+..++..+.. +++.|+.....|......++.. |.++..
T Consensus 90 ~~~~~~l~~~la~~~g---------~~~~~~~~sG-~~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~~~~-~~~~~~ 158 (407)
T PRK09064 90 NHYHVELERELADLHG---------KEAALVFTSG-YVSNDATLSTLAKLIPDCVIFSDELNHASMIEGIRRS-RCEKHI 158 (407)
T ss_pred HHHHHHHHHHHHHHhC---------CCcEEEECcH-HHHHHHHHHHHhCCCCCCEEEEeCcchHHHHHHHHHc-CCcEEE
Confidence 3346789999999885 2455665655 5687777776654 7776666655565555555544 777655
Q ss_pred EeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCC
Q 011801 163 VHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPK 242 (477)
Q Consensus 163 v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~ 242 (477)
++. .|++++++.++... ..++++|++++|+||+|.+.+ +++|.++|+++|+++|+||+|+..+|+...
T Consensus 159 ~~~-------~d~~~le~~l~~~~--~~~~~~v~~~~v~s~~G~~~~---l~~i~~l~~~~~~~livDEa~~~G~~g~~g 226 (407)
T PRK09064 159 FRH-------NDVAHLEELLAAAD--PDRPKLIAFESVYSMDGDIAP---IAEICDLADKYNALTYLDEVHAVGMYGPRG 226 (407)
T ss_pred ECC-------CCHHHHHHHHHhcc--CCCCeEEEEeCCCCCCccccC---HHHHHHHHHHcCCEEEEECCCcccccCCCC
Confidence 542 26788888876321 136789999999999999998 888888899999999999999833344322
Q ss_pred cccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHh-cccC---CCchHHHHHHHHhcCChhhH
Q 011801 243 FTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKM-SSFG---LVSSQTQYLLASMLSDDEFV 318 (477)
Q Consensus 243 ~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~-~~~~---~vs~~~q~~~~~~L~~~~~~ 318 (477)
..+.+..+ ...+.+++++||||.+|++| ||++++++ +.+.++.. ..+. ..++..+.++.+.++ ++
T Consensus 227 -~g~~~~~~---~~~~~div~~t~sKa~g~~G---G~~~~~~~-~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~---~~ 295 (407)
T PRK09064 227 -GGIAERDG---LMDRIDIIEGTLAKAFGVMG---GYIAGSAA-LVDAVRSYAPGFIFTTSLPPAIAAAALASIR---HL 295 (407)
T ss_pred -CChHHhcC---CCCCCeEEEEecchhhhccC---ceEecCHH-HHHHHHHhCccccccCcCCHHHHHHHHHHHH---HH
Confidence 22222211 11234688899999999888 99988554 44444433 2221 234444555444443 22
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCC-CC
Q 011801 319 DNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQC-TE 397 (477)
Q Consensus 319 ~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~-~~ 397 (477)
++. ...+++++++++++.+.|.+.|+++.++.+ .++++.++.. ....++.+.++++.||.|++...... .+
T Consensus 296 ~~~-~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~iv~i~~~~~------~~~~~l~~~L~~~~gi~v~~~~~p~~~~~ 367 (407)
T PRK09064 296 KES-NEERERHQERAAKLKAALDAAGIPVMPNES-HIVPVMVGDP------EKCKKASDMLLEEHGIYVQPINYPTVPRG 367 (407)
T ss_pred hcC-HHHHHHHHHHHHHHHHHHHHcCCCCCCCCC-CEEEEEeCCH------HHHHHHHHHHHHhCCEEEeeECCCCCCCC
Confidence 221 234567888899999999999988776554 5667766531 11235777777777999988653322 23
Q ss_pred CCEEEEEeccC-CHHHHHHHHHHHHHHHhh
Q 011801 398 PGWFRVCFANM-DDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 398 ~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~~ 426 (477)
.+++|++++.. ++++++.+++.|++++++
T Consensus 368 ~~~lRis~~~~~t~edi~~l~~~l~~~~~~ 397 (407)
T PRK09064 368 TERLRITPTPFHTDEMIDHLVEALVEVWAR 397 (407)
T ss_pred CceEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 46899999754 899999999999999865
No 153
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.93 E-value=1.2e-23 Score=214.43 Aligned_cols=302 Identities=15% Similarity=0.187 Sum_probs=212.2
Q ss_pred CCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhc-----CC-CCeEEEcCCCccchHHH---HhhhC
Q 011801 86 HGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLA-----NP-GDAFLVPSPYYAAFDRD---LSWRT 156 (477)
Q Consensus 86 ~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~-----~~-Gd~vlv~~P~y~~~~~~---~~~~~ 156 (477)
.+.+.+++++++++... + . .++++|++|+|+++++.+++..+. ++ ++.|+++.+.|+.+... ++..
T Consensus 39 ~~~~~l~~a~~~~~~~~-~--~-~~~~~i~~t~g~teal~~~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~- 113 (382)
T TIGR03403 39 ATHPAIAEALDKLYKGI-N--A-RDLDDIIITSCATESNNWVLKGVYFDEILKGGKNHIITTEVEHPAVRATCAFLESL- 113 (382)
T ss_pred HHHHHHHHHHHHHHHHc-C--c-CCCCeEEEeCCHHHHHHHHHHHHHHhhcccCCCCEEEEcCCccHHHHHHHHHHHHC-
Confidence 35678999999888532 1 1 268899999999999999998752 45 46899998777665433 4444
Q ss_pred CcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEeccccccc
Q 011801 157 GVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAAT 236 (477)
Q Consensus 157 g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~ 236 (477)
|++++.++++. ++.+|++++++++++ +++++++++|+||||.+++ +++|.++|+++|+++|+|++++
T Consensus 114 G~~v~~v~~~~--~g~~d~~~l~~~i~~------~t~lv~~~~~~n~tG~~~~---~~~I~~la~~~g~~~ivD~a~~-- 180 (382)
T TIGR03403 114 GVEVTYLPINE--QGTITAEQVREAITE------KTALVSVMWANNETGMIFP---IKEIGEICKERGVLFHTDAVQA-- 180 (382)
T ss_pred CCEEEEEecCC--CCCCCHHHHHHhccc------CCeEEEEEcccCCCccccC---HHHHHHHHHHcCCEEEEechhh--
Confidence 99999999864 457899999988864 6789999999999999999 6678888889999999999987
Q ss_pred ccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHH-HHHH---HHh--cccCCCchHHHHHHHH
Q 011801 237 VFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTV-VNCG---RKM--SSFGLVSSQTQYLLAS 310 (477)
Q Consensus 237 ~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i-~~~~---~~~--~~~~~vs~~~q~~~~~ 310 (477)
+...+ ..+. ..+..+++.|++|.+|.+| +|+++..+..- .... ... ...++++...+.++..
T Consensus 181 -~g~~~-~~~~--------~~~~D~~~~s~~K~~gp~G--~g~l~vr~~~~~~p~~~g~~~~~~~~~gt~~~~~~~al~~ 248 (382)
T TIGR03403 181 -IGKIP-VDVQ--------KAGVDFLSFSAHKFHGPKG--VGGLYIRKGVELTPLFHGGEHMGGRRSGTLNVPYIVAMGE 248 (382)
T ss_pred -cCCCc-cCcc--------ccCCCEEEEcchhhCCCCc--eEEEEECCCCCCCCcccCCCCCCCcccCCcChHHHHHHHH
Confidence 22211 1211 1123377889999988777 68887654321 0000 000 1134567777767766
Q ss_pred hcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEecCCc---eEEEEeeccchhhccCchHHHHHHHHHHHhcCeE
Q 011801 311 MLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLKSNA---GLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLN 386 (477)
Q Consensus 311 ~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~~~~---g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~ 386 (477)
.+.. ..++++...+++++.++++.++|.++ |+.+..+.. ..++.+.++.. + .+ ++... +.++||.
T Consensus 249 al~~---~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~-~~~~~-L~~~gI~ 317 (382)
T TIGR03403 249 AMRL---ANEYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIKGV-E-----GE-AMLWD-LNKAGIA 317 (382)
T ss_pred HHHH---HHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeCCC-C-----HH-HHHHh-hccCCEE
Confidence 6642 23346677788899999999999876 777775431 23555665521 1 11 34444 5677999
Q ss_pred EeCCCCCCCC-----------------CCCEEEEEeccC-CHHHHHHHHHHHHHHHhhhh
Q 011801 387 VSPGSSFQCT-----------------EPGWFRVCFANM-DDDTLQVALNRIAAFVQQDK 428 (477)
Q Consensus 387 v~pg~~f~~~-----------------~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~~~~ 428 (477)
++.|+.|... ..+.+|+|++.. ++++++++++.|++++++.+
T Consensus 318 v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~~~ 377 (382)
T TIGR03403 318 ASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQRLR 377 (382)
T ss_pred EEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9988766311 126799999876 89999999999999887644
No 154
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.93 E-value=1.1e-23 Score=216.06 Aligned_cols=297 Identities=12% Similarity=0.104 Sum_probs=201.0
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcC--CCCeEEEcCCCccchHHHHhhhCCcEEEEEec
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLAN--PGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHC 165 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~--~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~ 165 (477)
..+|++++|++++ .+ ..++++++++|+..++..+.. +|+.|+....+|......+... |+++..++.
T Consensus 92 ~~~Le~~la~~~g---------~~-~~l~~~sG~~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~~~~~-g~~~~~~~~ 160 (402)
T TIGR01821 92 HVELEAELADLHG---------KE-SALVFTSGYVANDATLATLAKIIPGCVIFSDELNHASMIEGIRHS-GAEKFIFRH 160 (402)
T ss_pred HHHHHHHHHHHhC---------CC-eEEEECchHHHHHHHHHHhhCCCCCCEEEEcchHhHHHHHHHHHc-CCeEEEECC
Confidence 5789999999986 12 345555558889988888765 6776666656666555555555 877655542
Q ss_pred cCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCccc
Q 011801 166 DISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTS 245 (477)
Q Consensus 166 ~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s 245 (477)
.|.+++++.++... ..++++|++++|+||+|.+.+ +++|.++|+++|+++|+||+|+..+++.. ...
T Consensus 161 -------~d~~~l~~~l~~~~--~~~~~~v~~e~~~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~G~~g~~-g~g 227 (402)
T TIGR01821 161 -------NDVAHLEKLLQSVD--PNRPKIIAFESVYSMDGDIAP---IEEICDLADKYGALTYLDEVHAVGLYGPR-GGG 227 (402)
T ss_pred -------CCHHHHHHHHHhcc--CCCCeEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEeCcccccccCCC-CCc
Confidence 26778888776421 125789999999999999998 88888999999999999999984334322 122
Q ss_pred HHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhc-cc---CCCchHHHHHHHHhcCChhhHHHH
Q 011801 246 VAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMS-SF---GLVSSQTQYLLASMLSDDEFVDNF 321 (477)
Q Consensus 246 ~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~-~~---~~vs~~~q~~~~~~L~~~~~~~~~ 321 (477)
..+.. +...+.+++++||||.+|++| ||++++++ +.+.++... .+ ...++..+.++.+.|+..+ +.
T Consensus 228 ~~~~~---~~~~~~div~~t~sKa~g~~G---G~i~~~~~-~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~---~~ 297 (402)
T TIGR01821 228 IAERD---GLMHRIDIIEGTLAKAFGVVG---GYIAASRK-LIDAIRSYAPGFIFTTSLPPAIAAGATASIRHLK---ES 297 (402)
T ss_pred cchhc---cCCCCCeEEEEechhhhccCC---ceeecCHH-HHHHHHHhCcCceecCcCCHHHHHHHHHHHHHhh---cC
Confidence 21111 111234678899999999888 99988554 555444332 22 1245566666666664321 11
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCC-CCCCE
Q 011801 322 LVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQC-TEPGW 400 (477)
Q Consensus 322 ~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~-~~~~~ 400 (477)
...++++.++++++.+.|++.|+++.++.+ .++.+.++.. ....++++.++++.||.+++...... .+..+
T Consensus 298 -~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~i~~i~~~~~------~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~ 369 (402)
T TIGR01821 298 -QDLRRAHQENVKRLKNLLEALGIPVIPNPS-HIVPVIIGDA------ALCKKVSDLLLNKHGIYVQPINYPTVPRGTER 369 (402)
T ss_pred -HHHHHHHHHHHHHHHHHHHHcCCCcCCCCC-CEEEEEeCCH------HHHHHHHHHHHhcCCEEEEeECCCCCCCCCce
Confidence 334455667888899999998988776655 4666655421 11235777777777999988653322 23468
Q ss_pred EEEEeccC-CHHHHHHHHHHHHHHHhh
Q 011801 401 FRVCFANM-DDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 401 ~Rl~~~~~-~~e~l~~~l~~l~~~~~~ 426 (477)
+|+++... ++++++++++.|++++++
T Consensus 370 lRis~~~~~t~edi~~~~~~l~~~~~~ 396 (402)
T TIGR01821 370 LRITPTPAHTDKMIDDLVEALLLVWDR 396 (402)
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 99999654 999999999999999865
No 155
>PLN02242 methionine gamma-lyase
Probab=99.93 E-value=1.3e-23 Score=214.88 Aligned_cols=218 Identities=17% Similarity=0.193 Sum_probs=162.7
Q ss_pred CcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHh----hhCCcEEEE
Q 011801 87 GLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLS----WRTGVQIVP 162 (477)
Q Consensus 87 G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~----~~~g~~~~~ 162 (477)
-..+|++.+|++.+ .+.+++++|+++|+.+++.+++++||.|+++.|.|+.+...+. ...|++++.
T Consensus 77 t~~~LE~~lA~l~g----------~~~~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~ 146 (418)
T PLN02242 77 TVLNLGRQMAALEG----------TEAAYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTF 146 (418)
T ss_pred hHHHHHHHHHHHhC----------CCeEEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEE
Confidence 46899999999886 3567899999999999999999999999999999988866542 113777776
Q ss_pred EeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCC
Q 011801 163 VHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPK 242 (477)
Q Consensus 163 v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~ 242 (477)
++.+ |++++++++++. ++|+|++++|+||||.+.+ +++|+++|+++|++||+|++|..+.+..
T Consensus 147 ~d~~-------d~e~l~~~i~~~-----~tklV~lesp~NPtG~v~d---l~~I~~la~~~gi~livDea~~~~~~~~-- 209 (418)
T PLN02242 147 VDIT-------DLEAVKKAVVPG-----KTKVLYFESISNPTLTVAD---IPELARIAHEKGVTVVVDNTFAPMVLSP-- 209 (418)
T ss_pred cCCC-------CHHHHHHhcCcC-----CCEEEEEecCCCCCCcccC---HHHHHHHHHHhCCEEEEECCCCccCCCH--
Confidence 6542 688888887531 4899999999999999987 8889999999999999999997543311
Q ss_pred cccHHHhhhhccCCCCcEEEEecCCcccCCCCce-EEEEEeCCHHHHHHHHHhcc----cCCCchHHHHHHHHhcCChhh
Q 011801 243 FTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFR-VGIVYSFNDTVVNCGRKMSS----FGLVSSQTQYLLASMLSDDEF 317 (477)
Q Consensus 243 ~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~R-vG~i~~~~~~i~~~~~~~~~----~~~vs~~~q~~~~~~L~~~~~ 317 (477)
.. .+..++++||||.++.+|.+ .||++++++.+ ..++.... ....+...|.+...++....
T Consensus 210 ----~~--------~g~divv~S~SK~l~g~g~~~gG~iv~~~~li-~~l~~~~~~~~~~~g~~~~~~~A~l~~~~l~t- 275 (418)
T PLN02242 210 ----AR--------LGADVVVHSISKFISGGADIIAGAVCGPAELV-NSMMDLHHGALMLLGPTMNPKVAFELSERLPH- 275 (418)
T ss_pred ----HH--------cCCcEEEEeCccccCCCCCceEEEEEcCHHHH-HHHHHHhhhhhhccCCCCCHHHHHHHHcCCCc-
Confidence 11 13458899999999988987 58888865543 43443311 22234445666555555432
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCCeEec
Q 011801 318 VDNFLVETSKRLAKRHHNFTKGLEQVGINCLK 349 (477)
Q Consensus 318 ~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~ 349 (477)
+..+.+++.++++.+.+.|+++++++..
T Consensus 276 ----l~~r~~~~~~~a~~la~~L~~~~~~V~y 303 (418)
T PLN02242 276 ----LSLRMKEHCRRAMEYAKRMKELGLKVIY 303 (418)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHhCCCEEEC
Confidence 3445567888999999999998877663
No 156
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.93 E-value=5e-24 Score=219.39 Aligned_cols=346 Identities=14% Similarity=0.090 Sum_probs=212.9
Q ss_pred CCCccccccccc--ccccc--HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccC
Q 011801 35 QNPGGVIQLGLA--ENQLC--FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFD 110 (477)
Q Consensus 35 ~~~~~~i~l~~~--~n~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~ 110 (477)
.+.+.+||+..+ .+.+. .+.+.+.+.+.- .....|+...+..++...+++.+.+..+ .+
T Consensus 33 ~dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~-------------~~~~~~~~~~~~~~~~~~l~~~l~~~~~----~~ 95 (413)
T cd00610 33 VDGNRYLDFLSGIGVLNLGHNHPEVVEALKEQL-------------AKLTHFSLGFFYNEPAVELAELLLALTP----EG 95 (413)
T ss_pred CCCCEEEEcCccHHhhccCCCCHHHHHHHHHHH-------------HhCcCccCcccCCHHHHHHHHHHHHhCC----CC
Confidence 445678999765 44443 455555554421 1223444432344555555555554433 35
Q ss_pred CCcEEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCccchHHHHhhhCC------------cEEEEEeccCC----CCcc
Q 011801 111 PDRIVMGGGATGANELIMFCLA--NPGDAFLVPSPYYAAFDRDLSWRTG------------VQIVPVHCDIS----NNFK 172 (477)
Q Consensus 111 ~~~i~~t~G~t~al~~i~~~l~--~~Gd~vlv~~P~y~~~~~~~~~~~g------------~~~~~v~~~~~----~~f~ 172 (477)
++++++++|+++|++.++..+. .+++.|++.+|+|++.........+ .+++.++.+.. ..+.
T Consensus 96 ~~~v~~~~sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (413)
T cd00610 96 LDKVFFVNSGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELA 175 (413)
T ss_pred CCEEEEcCcHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHH
Confidence 7899999999999999998763 5789999999999986544332212 23455554311 1245
Q ss_pred cCHHHHHHHHHHHHHhCCCeeEEEEeCC-CCCcccCC-CHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhh
Q 011801 173 ITREALEAAYERAQEASINIKGLIITNP-SNPLGTTL-DRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVI 250 (477)
Q Consensus 173 i~~~~l~~~~~~~~~~~~~~k~vii~nP-~NPtG~~~-~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~ 250 (477)
.|+++|++++++. ..++++ ++++| +|++|.++ +.+.+++|.++|+++++++|+||+|.++...+.. .. .+..
T Consensus 176 ~d~~~l~~~l~~~---~~~~~~-vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~-~~-~~~~ 249 (413)
T cd00610 176 DDLEALEEALEEH---PEEVAA-VIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKM-FA-FEHF 249 (413)
T ss_pred HHHHHHHHHHhcC---CCCEEE-EEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcch-hh-Hhhc
Confidence 5788888887642 124555 44555 56779876 6777999999999999999999999874333321 11 1111
Q ss_pred hhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHH--HHhc--ccCCCchHHHHHHHHhcCChhhHHHHHHHHH
Q 011801 251 QEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCG--RKMS--SFGLVSSQTQYLLASMLSDDEFVDNFLVETS 326 (477)
Q Consensus 251 ~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~--~~~~--~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~ 326 (477)
. ..++ +.|+||.++ .|+|+||++++++ +.+.+ .... .....++++|.++.+.|+.- ++ .+..
T Consensus 250 ~---~~~d----~~t~sK~l~-~g~~~g~~~~~~~-~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l---~~--~~~~ 315 (413)
T cd00610 250 G---VEPD----IVTLGKGLG-GGLPLGAVLGREE-IMDAFPAGPGLHGGTFGGNPLACAAALAVLEVL---EE--EGLL 315 (413)
T ss_pred C---CCCC----eEEEccccc-CccccEEEEEcHH-HHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHH---Hh--ccHH
Confidence 1 0122 458999999 5899999998554 44443 2221 12235667777766665321 11 1234
Q ss_pred HHHHHHHHHHHHHHhhC----CCeEecCCceEEEEeeccchhhc--cCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCE
Q 011801 327 KRLAKRHHNFTKGLEQV----GINCLKSNAGLFFWMDLRHLLKE--KTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGW 400 (477)
Q Consensus 327 ~~l~~r~~~l~~~L~~~----gi~~~~~~~g~~~~~~l~~~~~~--~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~ 400 (477)
++++++.+.+.+.|++. ++.......|.++|+.++..... .......++++.++ ++||.+.|+. ++.
T Consensus 316 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gv~v~~~~------~~~ 388 (413)
T cd00610 316 ENAAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAAL-ERGLLLRPSG------GNV 388 (413)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCcEEEeecCceEEEEEEecCCCcCCcchHHHHHHHHHHH-HCCeEEeecC------CCE
Confidence 45555556666666544 22222234568888888642100 00012234666655 4599999974 467
Q ss_pred EEEEeccC-CHHHHHHHHHHHHHHH
Q 011801 401 FRVCFANM-DDDTLQVALNRIAAFV 424 (477)
Q Consensus 401 ~Rl~~~~~-~~e~l~~~l~~l~~~~ 424 (477)
+|++++.. +++++++++++|++++
T Consensus 389 lR~~~~~~~t~~~i~~~~~~l~~~l 413 (413)
T cd00610 389 IRLLPPLIITEEEIDEGLDALDEAL 413 (413)
T ss_pred EEEECCCcCCHHHHHHHHHHHHHhC
Confidence 99998764 8999999999998763
No 157
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.93 E-value=1.7e-23 Score=215.70 Aligned_cols=285 Identities=15% Similarity=0.168 Sum_probs=188.1
Q ss_pred cCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHH-----HhhhCCcEEEEEeccCCCCcccCHHHHHHHHH
Q 011801 109 FDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRD-----LSWRTGVQIVPVHCDISNNFKITREALEAAYE 183 (477)
Q Consensus 109 ~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~-----~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~ 183 (477)
.++++|++++| ++|+..++.++++|||.|+++.|+|+++... +... |++++.++++. +++.+|+++++++++
T Consensus 86 ~~~~~i~~~sg-t~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~-~~~~~d~~~l~~~i~ 162 (416)
T PRK00011 86 AEYANVQPHSG-SQANAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGK-LYNVVSYGVDE-ETGLIDYDEVEKLAL 162 (416)
T ss_pred CCceeeecCCc-hHHHHHHHHHhcCCCCEEEEeccccCCccccccccccccc-eeeEeecCcCc-ccCCcCHHHHHHHHH
Confidence 34556766665 6799999999999999999999999865321 1222 67788777763 357899999999986
Q ss_pred HHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccc-cccCCCCcccHHHhhhhccCCCCcEEE
Q 011801 184 RAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAA-TVFSSPKFTSVAEVIQEMDCNRDLIHI 262 (477)
Q Consensus 184 ~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~-~~~~~~~~~s~~~~~~~~~~~~~~vii 262 (477)
+. ++++|++++++|| ...+ +++|.++|+++|+++|+|++|+. ..+.+.....+ . ...++
T Consensus 163 ~~-----~~k~v~~~~~~~~--~~~~---~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~---------~-~~di~ 222 (416)
T PRK00011 163 EH-----KPKLIIAGASAYS--RPID---FKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPV---------P-HADVV 222 (416)
T ss_pred hc-----CCCEEEECCCcCC--CccC---HHHHHHHHHHcCCEEEEECcchhcccccCccCCCC---------C-CCcEE
Confidence 42 6788888766554 4455 78889999999999999999852 21211111110 1 22477
Q ss_pred EecCCcccCCCCceEEEEEeCCHHHHHHHHHhcccCCCc-h--HHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHH
Q 011801 263 IYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVS-S--QTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKG 339 (477)
Q Consensus 263 v~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~~~~~vs-~--~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~ 339 (477)
++|+||.+ +|.|.||++++++.+.+.+++....+..+ + ..+.++...+. ...+..+.+..++++++++++.+.
T Consensus 223 ~~S~~K~l--~g~~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~--~~~~~~~~~~~~~~~~~~~~l~~~ 298 (416)
T PRK00011 223 TTTTHKTL--RGPRGGLILTNDEELAKKINSAVFPGIQGGPLMHVIAAKAVAFK--EALEPEFKEYAQQVVKNAKALAEA 298 (416)
T ss_pred EecCCcCC--CCCCceEEEeCCHHHHHHHHHHhCccccCCccHHHHHHHHHHHH--HHHhhhHHHHHHHHHHHHHHHHHH
Confidence 89999976 78999999997666666665443322221 1 12222111111 111234566778889999999999
Q ss_pred HhhCCCeEec-CCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCC-CCC---CCCCCEEEEEec-----cCC
Q 011801 340 LEQVGINCLK-SNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGS-SFQ---CTEPGWFRVCFA-----NMD 409 (477)
Q Consensus 340 L~~~gi~~~~-~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~-~f~---~~~~~~~Rl~~~-----~~~ 409 (477)
|++.|+++.. ...++++|+.+++. .+.. .++.+ .+++.||.+..+. .++ +..+..+|++.. +++
T Consensus 299 L~~~g~~~~~~~~~~~~~~i~~~~~----~~~~-~~~~~-~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t 372 (416)
T PRK00011 299 LAERGFRVVSGGTDNHLVLVDLRSK----GLTG-KEAEA-ALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFK 372 (416)
T ss_pred HHhCCCeeeecCCCCeEEEEeCccc----CCCH-HHHHH-HHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcC
Confidence 9999987764 12348899998632 1111 13444 5567799997432 121 112457999651 357
Q ss_pred HHHHHHHHHHHHHHHhh
Q 011801 410 DDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 410 ~e~l~~~l~~l~~~~~~ 426 (477)
+++++.+++.|++++.+
T Consensus 373 ~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 373 EAEMKEIAELIADVLDN 389 (416)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 89999999999999875
No 158
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.93 E-value=2.1e-23 Score=213.59 Aligned_cols=309 Identities=13% Similarity=0.105 Sum_probs=219.4
Q ss_pred CcHHHHHHHHHHHhcccCCCCccCC-CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccch--HHHHhhhCCcEEEEE
Q 011801 87 GLPEFRQAVAKFMGKGRGGRVTFDP-DRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAF--DRDLSWRTGVQIVPV 163 (477)
Q Consensus 87 G~~~lr~aia~~~~~~~g~~~~~~~-~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~--~~~~~~~~g~~~~~v 163 (477)
+..++++++++.+.+..| .++ +.+++++|++++++.++..+.++||+|+++++.|.+. ...++.. |++++.+
T Consensus 39 ~~~~~~~~~~~~l~~~~g----~~~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~~~~~~~~~~~~~~~-g~~v~~v 113 (401)
T PLN02409 39 AFPALTKELLEDVKYIFK----TKSGTPFIFPTTGTGAWESALTNTLSPGDKVVSFRIGQFSLLWIDQMQRL-NFDVDVV 113 (401)
T ss_pred HHHHHHHHHHHHHHHHhC----CCCCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeCCCchhHHHHHHHHHc-CCceEEE
Confidence 456777777777776655 333 4688899999999999999999999999999888654 3455655 9999999
Q ss_pred eccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCc
Q 011801 164 HCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKF 243 (477)
Q Consensus 164 ~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~ 243 (477)
+.+.+ ..++++++++++++. .+.++|+|++++++||||.+++.+++.++++ |+++|+++|+|++++ +...+
T Consensus 114 ~~~~~--~~~~~~~l~~~l~~~--~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~-~~~~g~~~vvD~v~s---~g~~~- 184 (401)
T PLN02409 114 ESPWG--QGADLDILKSKLRQD--TNHKIKAVCVVHNETSTGVTNDLAGVRKLLD-CAQHPALLLVDGVSS---IGALD- 184 (401)
T ss_pred ECCCC--CCCCHHHHHHHHhhC--cCCCccEEEEEeecccccccCCHHHHHHHHh-hhccCcEEEEEcccc---cCCcc-
Confidence 97643 347899999988741 0127899999999999999999766666666 999999999999987 32221
Q ss_pred ccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHh-c----------------c--cCCCchHH
Q 011801 244 TSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKM-S----------------S--FGLVSSQT 304 (477)
Q Consensus 244 ~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~-~----------------~--~~~vs~~~ 304 (477)
..+. ..+..+++.|.+|.++.|. ++||++.+++.+....... . . .++.+...
T Consensus 185 id~~--------~~~~D~~~~s~~K~l~~P~-G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Tp~~~~ 255 (401)
T PLN02409 185 FRMD--------EWGVDVALTGSQKALSLPT-GLGIVCASPKALEASKTAKSPRVFFDWADYLKFYKLGTYWPYTPSIQL 255 (401)
T ss_pred cccc--------ccCccEEEEcCccccCcCC-CcceeEECHHHHHHHhcCCCCCeecCHHHHHHHHhcCCCCCCCccHHH
Confidence 1111 2244577788899997443 7999999766543322100 0 0 11233345
Q ss_pred HHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCC----ceEEEEeeccchhhccCchHHHHHHHHHH
Q 011801 305 QYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSN----AGLFFWMDLRHLLKEKTLEGEIALWRTIV 380 (477)
Q Consensus 305 q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~----~g~~~~~~l~~~~~~~~~~~e~~l~~~ll 380 (477)
+.++...++.- .+.-+++.++++++..+++.+.|++.|+++..+. .+..+|+.++...+. .++.+.++
T Consensus 256 ~~al~~al~~~--~~~G~e~i~~~~~~l~~~l~~~L~~~g~~~~~~~~~~~s~~v~~~~~p~~~~~------~~l~~~l~ 327 (401)
T PLN02409 256 LYGLRAALDLI--FEEGLENVIARHARLGEATRLAVEAWGLKLCTKKPEWRSDTVTAVVVPEGIDS------AEIVKNAW 327 (401)
T ss_pred HHHHHHHHHHH--HHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcccceEEEeCCCCCCH------HHHHHHHH
Confidence 55555555421 1334667778888999999999998898876542 223467777744332 24667788
Q ss_pred HhcCeEEeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHhhhh
Q 011801 381 NDVKLNVSPGSSFQCTEPGWFRVCFAN-MDDDTLQVALNRIAAFVQQDK 428 (477)
Q Consensus 381 ~~~gI~v~pg~~f~~~~~~~~Rl~~~~-~~~e~l~~~l~~l~~~~~~~~ 428 (477)
+++||.+.+|.. ....+.|||+... .+++++..++.+|.+++.+..
T Consensus 328 ~~~~i~i~~G~~--~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~g 374 (401)
T PLN02409 328 KKYNLSLGLGLN--KVAGKVFRIGHLGNVNELQLLGALAGVEMVLKDVG 374 (401)
T ss_pred HhCCEEEEcCCC--cccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 889999998853 3245789999865 489999999999999997643
No 159
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.93 E-value=2.1e-23 Score=212.43 Aligned_cols=294 Identities=16% Similarity=0.185 Sum_probs=203.0
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhc---CCCCeEEEcCCCccchHHH---HhhhCCcEEE
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLA---NPGDAFLVPSPYYAAFDRD---LSWRTGVQIV 161 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~---~~Gd~vlv~~P~y~~~~~~---~~~~~g~~~~ 161 (477)
+.++|+.++++++ .++++|++|+|+|+++.+++.++. .+||.|++....|+.+... ++.. |++++
T Consensus 44 ~~~~r~~la~~~g--------~~~~~i~~t~~~t~a~~~al~~~~~~~~~~~~vv~~~~~~~s~~~~~~~~~~~-G~~v~ 114 (379)
T TIGR03402 44 VEEAREQVAKLLG--------AEPDEIIFTSGGTESDNTAIKSALAAQPEKRHIITTAVEHPAVLSLCQHLEKQ-GYKVT 114 (379)
T ss_pred HHHHHHHHHHHhC--------CCCCeEEEeCcHHHHHHHHHHHHHHhcCCCCeEEEcccccHHHHHHHHHHHHc-CCEEE
Confidence 4577788888876 568899999999999999988763 4568899988888776533 3334 99999
Q ss_pred EEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCC
Q 011801 162 PVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSP 241 (477)
Q Consensus 162 ~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~ 241 (477)
.++++. ++.+|++++++++++ +++++++++++||||.+++ +++|.++|+++|+++|+|++++ ++..
T Consensus 115 ~v~~~~--~g~~~~~~l~~~i~~------~~~lv~i~~~~n~tG~~~~---~~~I~~l~~~~g~~vivD~~~~---~g~~ 180 (379)
T TIGR03402 115 YLPVDE--EGRLDLEELRAAITD------DTALVSVMWANNETGTIFP---IEEIGEIAKERGALFHTDAVQA---VGKI 180 (379)
T ss_pred EEccCC--CCcCCHHHHHHhcCC------CcEEEEEEcccCCeeeccc---HHHHHHHHHHcCCEEEEECccc---cccc
Confidence 998763 457899999998854 7889999999999999999 6678889999999999999997 3221
Q ss_pred CcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHH-HH-----HHhcccCCCchHHHHHHHHhcCCh
Q 011801 242 KFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVN-CG-----RKMSSFGLVSSQTQYLLASMLSDD 315 (477)
Q Consensus 242 ~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~-~~-----~~~~~~~~vs~~~q~~~~~~L~~~ 315 (477)
+ ..+. ..+..+++.|.+|.+|.+| +|+++..++.... .. ......++.+.....++.+.++
T Consensus 181 ~-~~~~--------~~~~D~~~~s~~K~~gp~G--~g~l~v~~~~~~~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~-- 247 (379)
T TIGR03402 181 P-IDLK--------EMNIDMLSLSGHKLHGPKG--VGALYIRKGTRFRPLLRGGHQERGRRAGTENVPGIVGLGKAAE-- 247 (379)
T ss_pred c-cCcc--------cCCCCEEEEcHHHcCCCCc--eEEEEECCCCCCCCcccCCccCCCcCCCCccHHHHHHHHHHHH--
Confidence 1 2211 1233467778889777555 8888875542100 00 0001123334333344444442
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhh-C-CCeEecCC-----ceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEe
Q 011801 316 EFVDNFLVETSKRLAKRHHNFTKGLEQ-V-GINCLKSN-----AGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVS 388 (477)
Q Consensus 316 ~~~~~~~~~~~~~l~~r~~~l~~~L~~-~-gi~~~~~~-----~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~ 388 (477)
+..+++++..+++++.++.+.+.|.+ + ++.+..+. +...+|++... . .++.. .++++||.++
T Consensus 248 -~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~------~~~~~-~l~~~gI~v~ 316 (379)
T TIGR03402 248 -LATEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISFEYIE---G------EAILL-LLDMEGICAS 316 (379)
T ss_pred -HHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEecCCC---H------HHHHH-hhccCCEEEE
Confidence 22344566667788888888888875 4 66655432 23445654331 1 13444 4567799999
Q ss_pred CCCCCCCC-----------------CCCEEEEEeccC-CHHHHHHHHHHHHHHHhhhh
Q 011801 389 PGSSFQCT-----------------EPGWFRVCFANM-DDDTLQVALNRIAAFVQQDK 428 (477)
Q Consensus 389 pg~~f~~~-----------------~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~~~~ 428 (477)
+|+.|... .++.+|+|++.. ++++++.+++.|++++++.+
T Consensus 317 ~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~~~~ 374 (379)
T TIGR03402 317 SGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIARLR 374 (379)
T ss_pred chhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99877543 147899999876 89999999999999887643
No 160
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.93 E-value=4.3e-23 Score=209.53 Aligned_cols=289 Identities=12% Similarity=0.139 Sum_probs=196.7
Q ss_pred HHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhc------CCCCeEEEcCCCccchHHHHhhhCCcEEEE
Q 011801 89 PEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLA------NPGDAFLVPSPYYAAFDRDLSWRTGVQIVP 162 (477)
Q Consensus 89 ~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~------~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~ 162 (477)
.++++.+|++++ .+++++++++|+++++..++.++. ++||.|+++.++|..+...++.. |++++.
T Consensus 62 ~~~~~~la~~~g--------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~~~-G~~~~~ 132 (373)
T TIGR03812 62 EEVVGSLGNLLH--------LPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFEKAAEML-GLELRY 132 (373)
T ss_pred HHHHHHHHHHhC--------CCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHHHHHHHc-CCeEEE
Confidence 456666666665 567788999999999988876653 47799999999999998888877 999999
Q ss_pred EeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccC--C
Q 011801 163 VHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFS--S 240 (477)
Q Consensus 163 v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~--~ 240 (477)
++++ .++.+|++++++++++ ++..++++.|+||||.+.+ +++|.++|+++|+++|+|++|++.... .
T Consensus 133 v~~~--~~~~~d~~~l~~~l~~------~~~~vv~~~~~~~tG~~~~---~~~i~~l~~~~~~~livD~a~~~~~~~~~~ 201 (373)
T TIGR03812 133 APLD--EDYTVDVKDVEDLIDD------NTIGIVGIAGTTELGQIDD---IEELSKIALENGIYLHVDAAFGGFVIPFLK 201 (373)
T ss_pred EeeC--CCCCcCHHHHHHHHhh------CcEEEEEECCCCCCCccCC---HHHHHHHHHHcCCeEEEEcCchhHHHHHHh
Confidence 9876 3578899999998865 4444555568999999988 778888899999999999999754211 0
Q ss_pred C--CcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhcccC----------CCchHHHHHH
Q 011801 241 P--KFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSFG----------LVSSQTQYLL 308 (477)
Q Consensus 241 ~--~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~~~~----------~vs~~~q~~~ 308 (477)
. ....+. + . ......+..|.+| +++++.|+|+++..++.+.+.++...++. +.+.....++
T Consensus 202 ~~~~~~~~d-~-~----~~~~d~~~~s~~K-~~~~~~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~ 274 (373)
T TIGR03812 202 KGYNPPPFD-F-S----LPGVQSITIDPHK-MGLSPIPAGGILFRSKSYLKYLSVDAPYLTVKKQATITGTRSGASAAAT 274 (373)
T ss_pred cCCCCCCcc-c-c----CCCCCEEEECccc-cCCCcCCceEEEEeCHHHHhhhcccCcccCCCCCcceEeechhHHHHHH
Confidence 0 000000 0 0 0122234567789 66788899877654554444433222221 1222333344
Q ss_pred HHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCe-EecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEE
Q 011801 309 ASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGIN-CLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNV 387 (477)
Q Consensus 309 ~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~-~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v 387 (477)
...|..-. +..+++..+++.+.++++.+.|+++|+. +..+. ..++.+.++.. .++.+.+. ++||.+
T Consensus 275 ~~~l~~l~--~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~~~v~~~~~~~---------~~v~~~L~-~~gi~v 341 (373)
T TIGR03812 275 YAVIKYLG--REGYRKIVAECMENTRYLVEELKKIGFEPVIEPV-LNIVAFEVDDP---------EEVRKKLR-DRGWYV 341 (373)
T ss_pred HHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEcCCC-ceEEEEEeCCH---------HHHHHHHH-HCCcee
Confidence 44443211 2345667788889999999999998875 33433 35666766531 13555555 559999
Q ss_pred eCCCCCCCCCCCEEEEEeccC-CHHHHHHHHHHHHH
Q 011801 388 SPGSSFQCTEPGWFRVCFANM-DDDTLQVALNRIAA 422 (477)
Q Consensus 388 ~pg~~f~~~~~~~~Rl~~~~~-~~e~l~~~l~~l~~ 422 (477)
+++. .++++|+++... ++++++.++++|++
T Consensus 342 ~~~~-----~~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 342 SVTR-----CPKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred ccCC-----CCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 7652 367899999764 89999999999975
No 161
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.93 E-value=2.4e-23 Score=213.24 Aligned_cols=326 Identities=16% Similarity=0.123 Sum_probs=214.0
Q ss_pred cccccccccccccHHH-HHHHHHhCCCCcccccccccccccccccCC-----CCCcHHHHHHHHHHHhcccCCCCccCCC
Q 011801 39 GVIQLGLAENQLCFDL-IKDWITKNPYASICTAEGVEVFKDIAIFQD-----YHGLPEFRQAVAKFMGKGRGGRVTFDPD 112 (477)
Q Consensus 39 ~~i~l~~~~n~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-----~~G~~~lr~aia~~~~~~~g~~~~~~~~ 112 (477)
+++.++.++...+.+. +.+...+. . ....|.+ ..|.+++++++++++.+..| .+++
T Consensus 21 ~~~~l~~g~~~~~~p~~~~~~~~~~-~-------------~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g----~~~~ 82 (398)
T cd00613 21 SMSFLGSGTYKHNPPAVIKRNILEN-E-------------FYTAYTPYQPEISQGRLQALFELQTMLCELTG----MDVA 82 (398)
T ss_pred CcccccccccCCcCcHHHHHHhccc-c-------------CcccCCCCChhhhhhHHHHHHHHHHHHHHHHC----CCcc
Confidence 5688888877676544 44433332 0 1123444 57899999999999998776 4455
Q ss_pred cEEEeC-ChHHHHHHHHHHhcCC--CCeEEEcCCCccchHHHHhhhCC----cEEEEEeccCCCCcccCHHHHHHHHHHH
Q 011801 113 RIVMGG-GATGANELIMFCLANP--GDAFLVPSPYYAAFDRDLSWRTG----VQIVPVHCDISNNFKITREALEAAYERA 185 (477)
Q Consensus 113 ~i~~t~-G~t~al~~i~~~l~~~--Gd~vlv~~P~y~~~~~~~~~~~g----~~~~~v~~~~~~~f~i~~~~l~~~~~~~ 185 (477)
++++++ |+++++..++.++..+ ||.|++++|+|+.+...+... | .+++.++++. ++.+|++++++++.+
T Consensus 83 ~v~~~~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~-~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~- 158 (398)
T cd00613 83 NASLQDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTR-GEPLGIEVVEVPSDE--GGTVDLEALKEEVSE- 158 (398)
T ss_pred ceeccCchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHh-cccCCcEEEEeccCC--CCCcCHHHHHHhcCC-
Confidence 777766 4445555556666666 999999999999988776655 5 8888888753 457899999988743
Q ss_pred HHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEec
Q 011801 186 QEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYS 265 (477)
Q Consensus 186 ~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~S 265 (477)
++++|++++|+ |+|.+. +.+++|.++|+++|+++|+|++++... .. .... ..+..++++|
T Consensus 159 -----~t~~viv~~~~-~~G~~~--~~l~~i~~la~~~g~~livD~~~~~~~--~~--~~~~--------~~~~d~~~~s 218 (398)
T cd00613 159 -----EVAALMVQYPN-TLGVFE--DLIKEIADIAHSAGALVYVDGDNLNLT--GL--KPPG--------EYGADIVVGN 218 (398)
T ss_pred -----CeEEEEEECCC-CCceec--chHHHHHHHHHhcCCEEEEEecccccc--CC--CChH--------HcCCCEEEee
Confidence 78999999885 899994 356999999999999999999875321 11 1111 1245688899
Q ss_pred CCcccCCC----CceEEEEEeCCHHHHHHHHH------------------------------hcc--cCCCchHHHHHHH
Q 011801 266 LSKDMGLP----GFRVGIVYSFNDTVVNCGRK------------------------------MSS--FGLVSSQTQYLLA 309 (477)
Q Consensus 266 lSK~~g~~----G~RvG~i~~~~~~i~~~~~~------------------------------~~~--~~~vs~~~q~~~~ 309 (477)
++|.+ +| |.|+||++.+++.+.. +.. ... ++......|.+..
T Consensus 219 ~~K~~-~p~g~Ggp~~g~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~ 296 (398)
T cd00613 219 LQKTG-VPHGGGGPGAGFFAVKKELVRF-LPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAM 296 (398)
T ss_pred ccccC-CCCCCCCCceeEEEEhhhhHhh-CCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHH
Confidence 99998 56 7999999996654332 100 000 1111123333333
Q ss_pred HhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEE--EEeeccchhhccCchHHHHHHHHHHHhcCeEE
Q 011801 310 SMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLF--FWMDLRHLLKEKTLEGEIALWRTIVNDVKLNV 387 (477)
Q Consensus 310 ~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~--~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v 387 (477)
.+.... +..+++.+++++++.+++.+.|++++... .+.+..+ ++++++... . ....++++.+. +.||.+
T Consensus 297 ~l~~~~---~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~v~~~~~~~~---~-~~~~~~~~~L~-~~gi~~ 367 (398)
T cd00613 297 YIVYLG---PEGLKEIAERAHLNANYLAKRLKEVGGVL-PFNGPFFHEFVLRLPPLY---G-IRAEDLAKALI-DGGFHA 367 (398)
T ss_pred HHHHhC---HHHHHHHHHHHHHHHHHHHHHHHhcCCcc-cCCCCeeEEEEEEcCCcc---h-HHHHHHHHhhh-hcCccc
Confidence 332221 22356677888999999999999876443 2222333 567766310 0 11235666665 458876
Q ss_pred eCCCCCCCCCCCEEEEEeccC-CHHHHHHHHHHH
Q 011801 388 SPGSSFQCTEPGWFRVCFANM-DDDTLQVALNRI 420 (477)
Q Consensus 388 ~pg~~f~~~~~~~~Rl~~~~~-~~e~l~~~l~~l 420 (477)
.... +..++.+|+++... ++++++++++.|
T Consensus 368 ~~~~---~~~~~~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 368 PTMY---LPVDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred cccc---cCCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence 4321 22457899999765 899999998764
No 162
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.93 E-value=6.3e-23 Score=208.13 Aligned_cols=291 Identities=14% Similarity=0.139 Sum_probs=201.3
Q ss_pred HHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcC----CCCeEEEcCCCccchHHHHhhhCCcEEEEEec
Q 011801 90 EFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLAN----PGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHC 165 (477)
Q Consensus 90 ~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~----~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~ 165 (477)
++++.+|++++ .+++++++++|+++++..++.++.. +||.|++.++.|..+...++.. |++++.++.
T Consensus 63 ~~~~~la~~~g--------~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s~~~~~~~~-g~~~~~v~~ 133 (371)
T PRK13520 63 EAVEMLGELLH--------LPDAYGYITSGGTEANIQAVRAARNLAKAEKPNIVVPESAHFSFDKAADML-GVELRRAPL 133 (371)
T ss_pred HHHHHHHHHhC--------CCCCCeEEecCcHHHHHHHHHHHHhhccCCCceEEecCcchHHHHHHHHHc-CceEEEecC
Confidence 45555555554 4556789999999999999877643 5799999999999888877766 999999987
Q ss_pred cCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCC-CCcc
Q 011801 166 DISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSS-PKFT 244 (477)
Q Consensus 166 ~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~-~~~~ 244 (477)
+. ++.+|+++|++++.+ +++.|+++.++||||.+.+ +++|.++|+++|+++++|++|+++.... ....
T Consensus 134 ~~--~~~~d~~~l~~~i~~------~~~~vi~~~~~~~tG~~~~---l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~ 202 (371)
T PRK13520 134 DD--DYRVDVKAVEDLIDD------NTIGIVGIAGTTELGQVDP---IPELSKIALENGIFLHVDAAFGGFVIPFLDDPP 202 (371)
T ss_pred CC--CCcCCHHHHHHHHhh------CCEEEEEEcCCcCCcccCC---HHHHHHHHHHcCCCEEEEecchhHHHHhhcCCC
Confidence 53 567899999999875 5777888889999999998 8888888999999999999998643211 1100
Q ss_pred cHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhcccC----------CCchHHHHHHHHhcCC
Q 011801 245 SVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSFG----------LVSSQTQYLLASMLSD 314 (477)
Q Consensus 245 s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~~~~----------~vs~~~q~~~~~~L~~ 314 (477)
.+ .. . ..+...+..|.+| ++++|.++|+++..++.+.+.+....++. +.+.....++...|..
T Consensus 203 ~~-~~-~----~~~vd~~~~s~~K-~~~a~~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~al~~ 275 (371)
T PRK13520 203 NF-DF-S----LPGVDSITIDPHK-MGLAPIPAGGILFRDESYLDALAVDTPYLTSKKQATLTGTRSGAGVAATYAVMKY 275 (371)
T ss_pred Cc-cc-c----CCCCceEEECCcc-ccCccCCceEEEEcCHHHHHhhcccCccccCCCCcceEeeccChHHHHHHHHHhh
Confidence 00 00 0 1122345567788 55688999998876665544443222221 1122333444444432
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCe-EecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCC
Q 011801 315 DEFVDNFLVETSKRLAKRHHNFTKGLEQVGIN-CLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSF 393 (477)
Q Consensus 315 ~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~-~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f 393 (477)
-. +..+++..+++.+.++++.+.|++.|++ +..+.. .++.++++. . .++.+.+.+ .||.|+++.
T Consensus 276 l~--~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-~~v~~~~~~---~------~~v~~~L~~-~gi~v~~~~-- 340 (371)
T PRK13520 276 LG--REGYRKVVERCMENTRWLAEELKERGFEPVIEPVL-NIVAFDDPN---P------DEVREKLRE-RGWRVSVTR-- 340 (371)
T ss_pred hc--HhHHHHHHHHHHHHHHHHHHHHHhCCCEEecCCCc-eEEEEecCC---H------HHHHHHHHH-CCceeccCC--
Confidence 11 2224566777888889999999988987 555554 466677652 1 145555554 599998653
Q ss_pred CCCCCCEEEEEeccC-CHHHHHHHHHHHHHHHh
Q 011801 394 QCTEPGWFRVCFANM-DDDTLQVALNRIAAFVQ 425 (477)
Q Consensus 394 ~~~~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~ 425 (477)
.++++|+++... ++++++.+++.|+++++
T Consensus 341 ---~~~~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 341 ---CPEALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred ---CCCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 356899998654 89999999999998765
No 163
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.92 E-value=6.9e-23 Score=208.25 Aligned_cols=296 Identities=15% Similarity=0.175 Sum_probs=202.0
Q ss_pred CCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHH----HHhhhCCcEEE
Q 011801 86 HGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDR----DLSWRTGVQIV 161 (477)
Q Consensus 86 ~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~----~~~~~~g~~~~ 161 (477)
.+..++|+.++++++. -++++|++|+|+++++..++..++++||+|+++.+.|+.+.. .++.. |.+++
T Consensus 44 ~~~~~~~~~la~~~~~-------~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~-g~~~~ 115 (376)
T TIGR01977 44 REVEETRQLLAKLFNA-------PSSAHVVFTNNATTALNIALKGLLKEGDHVITTPMEHNSVARPLECLKEQI-GVEIT 115 (376)
T ss_pred HHHHHHHHHHHHHhCc-------CCCCeEEEeCCHHHHHHHHHHhccCCCCEEEECcchhhHHHHHHHHHHHHc-CcEEE
Confidence 4567899999999862 134589999999999999999999999999999999987643 23334 89999
Q ss_pred EEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCC
Q 011801 162 PVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSP 241 (477)
Q Consensus 162 ~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~ 241 (477)
.++.+. ++.+|++++++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++++. +..
T Consensus 116 ~v~~~~--~~~~d~~~l~~~~~~------~~~~v~~~~~~n~tG~~~~---~~~i~~l~~~~~~~livD~a~~~---g~~ 181 (376)
T TIGR01977 116 IVKCDN--EGLISPERIKRAIKT------NTKLIVVSHASNVTGTILP---IEEIGELAQENGIFFILDAAQTA---GVI 181 (376)
T ss_pred EEecCC--CCCcCHHHHHHhcCC------CCeEEEEECCCCCccccCC---HHHHHHHHHHcCCEEEEEhhhcc---Ccc
Confidence 888763 467899999998853 7899999999999999999 67788889999999999999973 222
Q ss_pred CcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHH----h--------------cccCCCchH
Q 011801 242 KFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRK----M--------------SSFGLVSSQ 303 (477)
Q Consensus 242 ~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~----~--------------~~~~~vs~~ 303 (477)
+ ..+. ..+..+++.|++|.++.|. .+|.++..++........ . ...++.+..
T Consensus 182 ~-~~~~--------~~~~D~~~~s~~K~l~~p~-g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~ 251 (376)
T TIGR01977 182 P-IDMT--------ELAIDMLAFTGHKGLLGPQ-GTGGLYIREGIKLKPLKSGGTGSHSALIDQPSELPDRFESGTLNTP 251 (376)
T ss_pred C-CCch--------hcCCCEEEecccccccCCC-CceEEEEcCCcCcCceecCCCccccccccccccchhhccCCCCCHH
Confidence 2 1111 1234577889999986442 367776655431110000 0 001122333
Q ss_pred HHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEecCC----ceEEEEeeccchhhccCchHHHHHHHH
Q 011801 304 TQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLKSN----AGLFFWMDLRHLLKEKTLEGEIALWRT 378 (477)
Q Consensus 304 ~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~~~----~g~~~~~~l~~~~~~~~~~~e~~l~~~ 378 (477)
...++...++. +.+.-.+..+++.++..+.+.+.|.+. |+++..+. .+..+++.+++. + ..++.+.
T Consensus 252 ~~~a~~~al~~--~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~------~~~~~~~ 322 (376)
T TIGR01977 252 GIAGLNAGIKF--IEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVSFTVEGI-D------SEEVADI 322 (376)
T ss_pred HHHHHHHHHHH--HHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEEEEECCC-C------HHHHHHH
Confidence 33333333321 111123455667777888888888865 67665431 234677777532 1 1135555
Q ss_pred HHHhcCeEEeCCCCCCC--------CCCCEEEEEeccC-CHHHHHHHHHHHHH
Q 011801 379 IVNDVKLNVSPGSSFQC--------TEPGWFRVCFANM-DDDTLQVALNRIAA 422 (477)
Q Consensus 379 ll~~~gI~v~pg~~f~~--------~~~~~~Rl~~~~~-~~e~l~~~l~~l~~ 422 (477)
+.+++||.+++|..|.. ..++.||++++.. ++++++.++++|++
T Consensus 323 L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 323 LDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred HhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 55555999999876642 2457999999765 99999999999975
No 164
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.92 E-value=9.3e-23 Score=205.82 Aligned_cols=323 Identities=14% Similarity=0.163 Sum_probs=206.4
Q ss_pred CCCCCCCCCCccccccccccccccHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCC
Q 011801 28 RNPFHPTQNPGGVIQLGLAENQLCFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRV 107 (477)
Q Consensus 28 ~~~~~~~~~~~~~i~l~~~~n~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~ 107 (477)
+-.+.+.-|..|++ -.++.++ +++.+.+.+.+.. ..| .+.+++++++++++.+.+|
T Consensus 4 ~~~~~~~ina~g~~-t~~g~s~-~~~~v~~a~~~~~----------------~~~---~~~~~~~~~~~~~~a~~~g--- 59 (363)
T TIGR01437 4 KYGLKKVINASGKM-TILGVST-VSDEVADAQKRGA----------------QNY---FEIKELVNKTGEYIANLLG--- 59 (363)
T ss_pred cCCCceEEECCcEe-ecCCCCC-CCHHHHHHHHHHH----------------hcC---CCHHHHHHHHHHHHHHhhC---
Confidence 33455556677766 3344444 4444445444421 123 3567888888888877655
Q ss_pred ccCCCcEEEeCChHHHHHHHHHHhcCCCC---------------eEEEcCCCccch----HHHHhhhCCcEEEEEeccCC
Q 011801 108 TFDPDRIVMGGGATGANELIMFCLANPGD---------------AFLVPSPYYAAF----DRDLSWRTGVQIVPVHCDIS 168 (477)
Q Consensus 108 ~~~~~~i~~t~G~t~al~~i~~~l~~~Gd---------------~vlv~~P~y~~~----~~~~~~~~g~~~~~v~~~~~ 168 (477)
.+++++|+|+|+|+.+++.+++++|| .|+++.|.|..| ...+... |++++.++++
T Consensus 60 ---~~~~~~~~g~t~al~~al~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~-g~~~v~v~~~-- 133 (363)
T TIGR01437 60 ---VEDAVIVSSASAGIAQSVAAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLG-GGKVVEAGYA-- 133 (363)
T ss_pred ---CCeEEEEcCHHHHHHHHHHHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhc-CCeEEEEcCC--
Confidence 45799999999999999999999998 999999888765 3444545 9999888753
Q ss_pred CCcccCHHHHHHHHHHHHHhCCCeeEEE-EeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHH
Q 011801 169 NNFKITREALEAAYERAQEASINIKGLI-ITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVA 247 (477)
Q Consensus 169 ~~f~i~~~~l~~~~~~~~~~~~~~k~vi-i~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~ 247 (477)
+.+|++++++++.+ ++++++ +++|+||+|.+.+ +++|.++|+++|+++|+|++|+. .. .+..
T Consensus 134 --~~~d~~~le~ai~~------~t~ai~~v~~~~~~~g~~~~---~~~i~~~a~~~gi~vivD~a~~~---~~---~~~~ 196 (363)
T TIGR01437 134 --NECSAEQLEAAITE------KTAAILYIKSHHCVQKSMLS---VEDAAQVAQEHNLPLIVDAAAEE---DL---QKYY 196 (363)
T ss_pred --CCCCHHHHHHhcCh------hceEEEEEecCCCCcCCcCC---HHHHHHHHHHcCCeEEEECCCCC---ch---HHHH
Confidence 45899999999965 677665 6788999999999 66789999999999999999972 11 1111
Q ss_pred HhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhccc-------CCCchHHHHHHHHhcCChhhHHH
Q 011801 248 EVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSF-------GLVSSQTQYLLASMLSDDEFVDN 320 (477)
Q Consensus 248 ~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~~~-------~~vs~~~q~~~~~~L~~~~~~~~ 320 (477)
. .+..+++.|++|.+ .|++.|+++.+++.+. ..+..... +..+..++.++...+.+.
T Consensus 197 ~--------~g~D~~~~S~~K~l--~gp~~G~l~~~~~~i~-~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~~~----- 260 (363)
T TIGR01437 197 R--------LGADLVIYSGAKAI--EGPTSGLVLGKKKYIE-WVKLQSKGIGRAMKVGKENILGLTAALEQYLST----- 260 (363)
T ss_pred H--------cCCCEEEEeCCccc--CCCceEEEEEcHHHHH-HHHhccCCCcceeccCHHHHHHHHHHHHHHHcc-----
Confidence 1 12346778999977 6888999998555443 33222111 111112222222222221
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhC-CCeEecC--CceE-----EEEeeccchhhccCchHHHHHHHHHHHhcC--eEEeCC
Q 011801 321 FLVETSKRLAKRHHNFTKGLEQV-GINCLKS--NAGL-----FFWMDLRHLLKEKTLEGEIALWRTIVNDVK--LNVSPG 390 (477)
Q Consensus 321 ~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~~--~~g~-----~~~~~l~~~~~~~~~~~e~~l~~~ll~~~g--I~v~pg 390 (477)
-.+..+.+.++++.+.+.|.++ |+.+... ..+. -+.++... ..... .++.+. |++.+ |.+++
T Consensus 261 -~~~~~~~~~~~~~~l~~~L~~i~g~~~~~~~~~~~~~~~~~~v~~~~~~----~g~~~-~~l~~~-L~~~~~~I~~r~- 332 (363)
T TIGR01437 261 -GKESGAEMVAKLTPFIEALNTLKGVSASIVQDEAGRDIARAEIRFDESE----LGMTA-ADVVQA-LRQGEPAIYTRG- 332 (363)
T ss_pred -CcccHHHHHHHHHHHHHHHhcCCCeEEEEecCCCCCcCceEEEEEeccC----CCCCH-HHHHHH-HhcCCCCEEEee-
Confidence 1122223345566788999887 8877632 1111 11122211 01111 145454 45446 66665
Q ss_pred CCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHH
Q 011801 391 SSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFV 424 (477)
Q Consensus 391 ~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~ 424 (477)
.| .+.+.+|+++...++++++.++++|++++
T Consensus 333 -~~--~~~~~~~l~~~~~~~~e~~~~~~~l~~~~ 363 (363)
T TIGR01437 333 -YK--ANEGIIEIDPRSVTGGQLDIIVERIREIV 363 (363)
T ss_pred -ee--ecCCeEEEEeecCCHHHHHHHHHHHHHhC
Confidence 22 34678999998789999999999998763
No 165
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.91 E-value=4e-22 Score=203.58 Aligned_cols=215 Identities=16% Similarity=0.217 Sum_probs=155.4
Q ss_pred cccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHH----Hhhh
Q 011801 80 AIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRD----LSWR 155 (477)
Q Consensus 80 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~----~~~~ 155 (477)
.+|+. .+..+|++++|++++ .+++++++|+++|+..++.+++++||.|+++.|.|+.+... ++..
T Consensus 59 ~r~~~-p~~~~Le~~iA~~~g----------~~~~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~ 127 (400)
T PRK06234 59 SRLGN-PTSTEVENKLALLEG----------GEAAVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRY 127 (400)
T ss_pred cCCCC-ccHHHHHHHHHHHhC----------CCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhC
Confidence 33443 468999999999986 23578888889999999999999999999999999865543 3444
Q ss_pred CCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc--CeEEEecccc
Q 011801 156 TGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDK--NIHLVCDEIY 233 (477)
Q Consensus 156 ~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~--~~~lI~De~y 233 (477)
|++++.++.. |++++++++.+ ++|+|++++|+||||.+.+ +++|.++|+++ |+++|+||+|
T Consensus 128 -G~~v~~vd~~-------d~e~l~~~i~~------~tklI~iesP~NPtG~v~d---l~~I~~la~~~~~~i~livDea~ 190 (400)
T PRK06234 128 -GVEVTFVDTS-------NLEEVRNALKA------NTKVVYLETPANPTLKVTD---IKAISNIAHENNKECLVFVDNTF 190 (400)
T ss_pred -CeEEEEECCC-------CHHHHHHHhcc------CCeEEEEECCCCCCCCcCC---HHHHHHHHHhcCCCCEEEEECCC
Confidence 8988888742 68889888864 7899999999999999999 77788888886 9999999999
Q ss_pred cccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceE-EEEEeCCHHHHHHHHHh--c-cc-CCCchHHHHHH
Q 011801 234 AATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRV-GIVYSFNDTVVNCGRKM--S-SF-GLVSSQTQYLL 308 (477)
Q Consensus 234 ~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~Rv-G~i~~~~~~i~~~~~~~--~-~~-~~vs~~~q~~~ 308 (477)
+...+.. ++ ..+..++++|+||.++.+|.|+ ||++++++ +.+.++.. . .+ ..++++..+.+
T Consensus 191 ~~~~~~~----~l---------~~g~Divv~S~sK~l~g~g~~~gG~v~~~~~-~~~~l~~~~~~~~~g~~l~p~~a~l~ 256 (400)
T PRK06234 191 CTPYIQR----PL---------QLGADVVVHSATKYLNGHGDVIAGFVVGKEE-FINQVKLFGIKDMTGSVIGPFEAFLI 256 (400)
T ss_pred CchhcCC----ch---------hhCCcEEEeeccccccCCCCceeEEEEecHH-HHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 8543321 11 1134588999999999889775 99998665 44433321 1 12 23555655655
Q ss_pred HHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 011801 309 ASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV 343 (477)
Q Consensus 309 ~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~ 343 (477)
..-|+.-+ .+.++..++...+.+.|+++
T Consensus 257 ~~~l~tl~-------~r~~~~~~na~~~a~~L~~~ 284 (400)
T PRK06234 257 IRGMKTLQ-------IRMEKHCKNAMKVAKFLESH 284 (400)
T ss_pred HhccCcHH-------HHHHHHHHHHHHHHHHHHcC
Confidence 55555432 23333445566677777654
No 166
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.91 E-value=1.7e-22 Score=207.13 Aligned_cols=275 Identities=15% Similarity=0.177 Sum_probs=186.4
Q ss_pred CCcEEEeCChHHHHHHHHHHhc--------CCCCeEEEcCCCccchHHHHhhhCC------------cEEEEEeccCCCC
Q 011801 111 PDRIVMGGGATGANELIMFCLA--------NPGDAFLVPSPYYAAFDRDLSWRTG------------VQIVPVHCDISNN 170 (477)
Q Consensus 111 ~~~i~~t~G~t~al~~i~~~l~--------~~Gd~vlv~~P~y~~~~~~~~~~~g------------~~~~~v~~~~~~~ 170 (477)
.+.+++++++++|++.++.... ...+.|+..+-+|++....+...+| .+++.++.
T Consensus 97 ~~~~~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 171 (403)
T PRK05093 97 AERVFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPF----- 171 (403)
T ss_pred CCEEEEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCC-----
Confidence 3689999999999999997541 1235688888887775432211111 11222221
Q ss_pred cccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCC--CHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHH
Q 011801 171 FKITREALEAAYERAQEASINIKGLIITNPSNPLGTTL--DRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAE 248 (477)
Q Consensus 171 f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~--~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~ 248 (477)
-|++++++.+.+ ++++|+++ |.||+|.++ +.+.+++|+++|++||+++|+||+|.++.+.+.. .+...
T Consensus 172 --~d~~~l~~~l~~------~~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~-~~~~~ 241 (403)
T PRK05093 172 --NDLAAVKAVIDD------HTCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDL-FAYMH 241 (403)
T ss_pred --CCHHHHHHHhcC------CeEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccc-hhhhh
Confidence 167888887742 67776666 889988765 8899999999999999999999999987665542 22111
Q ss_pred hhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHH-hc-ccCCCchHHHHHHHHhcCChhhHHHHHHHHH
Q 011801 249 VIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRK-MS-SFGLVSSQTQYLLASMLSDDEFVDNFLVETS 326 (477)
Q Consensus 249 ~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~-~~-~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~ 326 (477)
. . ..++ +.||||.+| +|+|+||++++++ +.+.+.. .. .....+++.|.++.+.|+... -.+..
T Consensus 242 ~-~---~~pd----i~s~sK~l~-~G~rig~vv~~~~-i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~-----~~~~~ 306 (403)
T PRK05093 242 Y-G---VTPD----ILTSAKALG-GGFPIGAMLTTAE-IASHFKVGTHGSTYGGNPLACAVAEAVFDIIN-----TPEVL 306 (403)
T ss_pred c-C---CCCC----EEEeccccc-CCcceEEEEEcHH-HHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh-----hccHH
Confidence 1 0 1233 569999999 9999999999665 4444332 11 122367888988888664211 12334
Q ss_pred HHHHHHHHHHHHHHhhCC----CeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEE
Q 011801 327 KRLAKRHHNFTKGLEQVG----INCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFR 402 (477)
Q Consensus 327 ~~l~~r~~~l~~~L~~~g----i~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~R 402 (477)
++++++++.+.+.|++.+ +....+..|+++|+.++.... ....+++..++++ ||.+.|+ +++++|
T Consensus 307 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~l~~~~~----~~~~~~~~~l~~~-Gv~v~~~------g~~~lR 375 (403)
T PRK05093 307 EGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLIGAELKPQYK----GRARDFLNAAAEE-GVMVLVA------GPDVLR 375 (403)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceEEEEEecCcch----hHHHHHHHHHHHC-CeEEecC------CCCEEE
Confidence 677788888888888753 222334568999999874210 1233577777765 9999874 246899
Q ss_pred EEeccC-CHHHHHHHHHHHHHHHhh
Q 011801 403 VCFANM-DDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 403 l~~~~~-~~e~l~~~l~~l~~~~~~ 426 (477)
++++.. +++++++++++|++++.+
T Consensus 376 l~~~~~~~~~~i~~~~~~l~~~l~~ 400 (403)
T PRK05093 376 FAPSLVIEEADIDEGLARFEKAVAK 400 (403)
T ss_pred EeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 987665 999999999999999864
No 167
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.91 E-value=3.2e-22 Score=202.87 Aligned_cols=218 Identities=18% Similarity=0.190 Sum_probs=157.3
Q ss_pred ccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhh---h
Q 011801 79 IAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSW---R 155 (477)
Q Consensus 79 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~---~ 155 (477)
..+|+++ -..+|++++|++.+ .+++++++|+++|+.+++.+++++||.|+++.|+|++....+.. .
T Consensus 45 Y~R~~~p-~~~~le~~lA~l~g----------~~~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~ 113 (382)
T TIGR02080 45 YSRSGNP-TRDLLQQALAELEG----------GAGAVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKK 113 (382)
T ss_pred ccCCCCc-hHHHHHHHHHHHhC----------CCcEEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhh
Confidence 4566654 36899999999875 36799999999999999999999999999999999875543322 2
Q ss_pred CCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccc
Q 011801 156 TGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAA 235 (477)
Q Consensus 156 ~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~ 235 (477)
.|+++..++. .|++++++++++ ++|+|++++|+||||.+++ +++|+++|+++|+++|+|++|+.
T Consensus 114 ~~~~v~~~d~-------~d~~~l~~ai~~------~tklV~l~~p~NPtG~~~d---l~~I~~la~~~g~~vvvD~a~~~ 177 (382)
T TIGR02080 114 GCFRVLFVDQ-------GDEQALRAALAQ------KPKLVLIETPSNPLLRVVD---IAKICHLAKAVGAVVVVDNTFLS 177 (382)
T ss_pred cCeEEEEECC-------CCHHHHHHhcCc------CceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCcc
Confidence 1455544431 268888888754 7899999999999999999 67788888899999999999975
Q ss_pred cccCCCCcccHHHhhhhccCCCCcEEEEecCCcccC-CCCceEEEEEeCCHHHHHHHHHhccc--CCCchHHHHHHHHhc
Q 011801 236 TVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMG-LPGFRVGIVYSFNDTVVNCGRKMSSF--GLVSSQTQYLLASML 312 (477)
Q Consensus 236 ~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g-~~G~RvG~i~~~~~~i~~~~~~~~~~--~~vs~~~q~~~~~~L 312 (477)
..+.. ++ .. +..++++|+||.++ .+|++.|++++.++.+.+.++....+ ..++++.++++..-+
T Consensus 178 ~~~~~----pl-~~--------gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~~~g~~~sp~~a~l~lr~l 244 (382)
T TIGR02080 178 PALQN----PL-AL--------GADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWANNLGVTGGAFDSYLTLRGL 244 (382)
T ss_pred cccCC----ch-hh--------CCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHHHccCCCCCHHHHHHHHccc
Confidence 32211 11 11 22378899999985 57899999988766666555443332 335666666665444
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 011801 313 SDDEFVDNFLVETSKRLAKRHHNFTKGLEQV 343 (477)
Q Consensus 313 ~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~ 343 (477)
+. +..+.++..++...+.+.|+++
T Consensus 245 ~t-------l~~R~~~~~~na~~~a~~L~~~ 268 (382)
T TIGR02080 245 RT-------LVARMRLQQRNAQAIVEYLQTQ 268 (382)
T ss_pred ch-------HHHHHHHHHHHHHHHHHHHHhC
Confidence 42 2233445556777777888765
No 168
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.91 E-value=3.7e-22 Score=204.93 Aligned_cols=297 Identities=12% Similarity=0.092 Sum_probs=200.3
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcC--CCCeEEEcCCCccchHHHHhhhCCcEEEEEec
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLAN--PGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHC 165 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~--~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~ 165 (477)
..+|++.+|++++ .+..++++++++|+..++..+.. +||.|+.....|+.....+... |.++..++.
T Consensus 92 ~~~le~~la~~~g----------~~~~~~~~SG~~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~~~~-g~~~~~~~~ 160 (406)
T PRK13393 92 HVLLEAELADLHG----------KEAALLFTSGYVSNWAALSTLGSRLPGCVILSDELNHASMIEGIRHS-RAEKRIFRH 160 (406)
T ss_pred HHHHHHHHHHHhC----------CCcEEEeCCcHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHc-CCeEEEeCC
Confidence 4788888888875 13444444445699999987765 7887777777777766666655 777766652
Q ss_pred cCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCccc
Q 011801 166 DISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTS 245 (477)
Q Consensus 166 ~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s 245 (477)
.|++.+++.++... ..++++|++++++||+|.+.+ +++|.++|+++|+++|+||+|+..+++... ..
T Consensus 161 -------~d~~~l~~~l~~~~--~~~~~~v~~~~v~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~G-~g 227 (406)
T PRK13393 161 -------NDPADLERKLSDLD--PHRPKLVAFESVYSMDGDIAP---IAEICDVAEKHGAMTYLDEVHAVGLYGPRG-GG 227 (406)
T ss_pred -------CCHHHHHHHHHhcc--CCCCEEEEEcCCCCCCCchhC---HHHHHHHHHHcCCEEEEECCccccccCCCC-Cc
Confidence 26778887775421 125788899999999999999 888888999999999999999843344322 22
Q ss_pred HHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhc-cc---CCCchHHHHHHHHhcCChhhHHHH
Q 011801 246 VAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMS-SF---GLVSSQTQYLLASMLSDDEFVDNF 321 (477)
Q Consensus 246 ~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~-~~---~~vs~~~q~~~~~~L~~~~~~~~~ 321 (477)
+.... +...+.+++++||||.+|++| ||++++++ +.+.++... .+ +..++..+.++.+.|+.. +..
T Consensus 228 ~~~~~---~~~~~~~i~~~tlsKa~g~~G---G~~~~~~~-~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~---~~~ 297 (406)
T PRK13393 228 IAERE---GLADRLTIIEGTLAKAFGVMG---GYITGSAA-LCDFIRSFASGFIFTTSLPPAVAAGALASVRHL---KAS 297 (406)
T ss_pred hhhhc---CCCCCCeEEEEeCchhhcccC---ceeeCCHH-HHHHHHHhCcCceecCccCHHHHHHHHHHHHHH---hhC
Confidence 22111 112234677899999999888 99988544 545444432 22 223445566666666432 111
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCC-CCCCE
Q 011801 322 LVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQC-TEPGW 400 (477)
Q Consensus 322 ~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~-~~~~~ 400 (477)
. ..+.++.++.+++.+.|++.|+++.++.+. ++.+.+... ....++.+.+++++||.++++..... .+.++
T Consensus 298 ~-~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-i~~v~~~~~------~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~ 369 (406)
T PRK13393 298 S-AERERHQDRVARLRARLDKAGIPHLPNPSH-IVPVMVGDP------VLCKQISDELLDRYGIYVQPINYPTVPRGTER 369 (406)
T ss_pred H-HHHHHHHHHHHHHHHHHHHcCCCcCCCCCC-eEEEEeCCH------HHHHHHHHHHHHhCCEEEEeECCCCCCCCCce
Confidence 1 224567788889999999888877666554 555544321 11235677777767999998653321 23468
Q ss_pred EEEEeccC-CHHHHHHHHHHHHHHHhh
Q 011801 401 FRVCFANM-DDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 401 ~Rl~~~~~-~~e~l~~~l~~l~~~~~~ 426 (477)
+|+++... +++++++++++|++++++
T Consensus 370 iRis~~~~~t~edid~l~~~l~~~~~~ 396 (406)
T PRK13393 370 LRITPSPLHTDADIEHLVQALSEIWAR 396 (406)
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHh
Confidence 99999754 999999999999999865
No 169
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.91 E-value=3.5e-22 Score=203.23 Aligned_cols=334 Identities=13% Similarity=0.112 Sum_probs=210.1
Q ss_pred CCCCccccccccccc--cc--cHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCcc
Q 011801 34 TQNPGGVIQLGLAEN--QL--CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTF 109 (477)
Q Consensus 34 ~~~~~~~i~l~~~~n--~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~ 109 (477)
+.+.+.+||+..+.. .+ +.+.+.+.+.+.-+ ...... .....++++++++++.+..+
T Consensus 25 d~~G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~-------------~~~~~~-~~~~~~~~~~la~~l~~~~~----- 85 (377)
T PRK02936 25 DNNGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLD-------------DIWHVS-NLFTNSLQEEVASLLAENSA----- 85 (377)
T ss_pred eCCCCEEEECCcchhhccCCCCCHHHHHHHHHHHH-------------hccccc-cccCCHHHHHHHHHHHhcCC-----
Confidence 344556788866542 23 34555555554311 111111 12346899999999986432
Q ss_pred CCCcEEEeCChHHHHHHHHHHh-cCCC-CeEEEcCCCccchHHHHhhhCCcEEE---EEeccCCCCcc--cCHHHHHHHH
Q 011801 110 DPDRIVMGGGATGANELIMFCL-ANPG-DAFLVPSPYYAAFDRDLSWRTGVQIV---PVHCDISNNFK--ITREALEAAY 182 (477)
Q Consensus 110 ~~~~i~~t~G~t~al~~i~~~l-~~~G-d~vlv~~P~y~~~~~~~~~~~g~~~~---~v~~~~~~~f~--i~~~~l~~~~ 182 (477)
.+.+++++++++|++.++... ..+| +.|++.+++|++.........+.... ..+......+- -|++++++.+
T Consensus 86 -~~~~~~~~sG~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 164 (377)
T PRK02936 86 -GDLVFFCNSGAEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVM 164 (377)
T ss_pred -CCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhc
Confidence 358999999999999999853 2244 67999999998654322111122110 00110000000 1678888877
Q ss_pred HHHHHhCCCeeEEEEeCCCCCcccC-CCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEE
Q 011801 183 ERAQEASINIKGLIITNPSNPLGTT-LDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIH 261 (477)
Q Consensus 183 ~~~~~~~~~~k~vii~nP~NPtG~~-~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~vi 261 (477)
.+ ++++|++..+.+++|.. .+.+.+++|.++|++||+++|+||+|.++.+.+.. .+.... . ..++
T Consensus 165 ~~------~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~-~~~~~~-~---~~~d--- 230 (377)
T PRK02936 165 NE------EVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTL-FAYEQF-G---LDPD--- 230 (377)
T ss_pred cC------CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchh-hHHHhh-C---CCCc---
Confidence 53 68888888888999976 58899999999999999999999999876554432 222111 1 1223
Q ss_pred EEecCCcccCCCCceEEEEEeCCHHHHHHHHHhc--ccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHH
Q 011801 262 IIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMS--SFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKG 339 (477)
Q Consensus 262 iv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~--~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~ 339 (477)
+.+|||.+| +|+|+||+++++ .+.+.+.... .....+++.|.++.++|+.... + +..++++++.+.+.+.
T Consensus 231 -i~t~sK~l~-~G~~ig~v~~~~-~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~-~----~~~~~~~~~~~~l~~~ 302 (377)
T PRK02936 231 -IVTVAKGLG-NGIPVGAMIGKK-ELGTAFGPGSHGSTFGGNPLAMAAAKEVLQVIKQ-P----SFLEEVQEKGEYFLQK 302 (377)
T ss_pred -EEEEccccc-CCCccEEEEEcH-HHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHh-c----cHHHHHHHHHHHHHHH
Confidence 237999999 999999999965 4444443221 1123678899998888864321 2 2234455555666666
Q ss_pred HhhC--CCeEe--cCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEec-cCCHHHHH
Q 011801 340 LEQV--GINCL--KSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFA-NMDDDTLQ 414 (477)
Q Consensus 340 L~~~--gi~~~--~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~-~~~~e~l~ 414 (477)
|.+. ++... ....|+++|++++.. ...+++ .+.+.||.+.|+. ++++|+++. ..++++++
T Consensus 303 L~~~~~~~~~~~~v~~~g~~~~i~~~~~--------~~~~~~-~l~~~gv~v~~~g------~~~lRi~p~~~~~~~~i~ 367 (377)
T PRK02936 303 LQEELEHLECVKNIRGKGLMIGIECTEE--------VAPVIE-QLREEGLLVLSAG------PNVIRLLPPLVVTKEELD 367 (377)
T ss_pred HHHHHhhCCcEEeEeecceEEEEEecch--------HHHHHH-HHHHCCeEEecCC------CCEEEEECCcccCHHHHH
Confidence 6542 22211 123568999998742 123444 4456799998752 468999973 35999999
Q ss_pred HHHHHHHHHH
Q 011801 415 VALNRIAAFV 424 (477)
Q Consensus 415 ~~l~~l~~~~ 424 (477)
+++++|++++
T Consensus 368 ~~i~~l~~~~ 377 (377)
T PRK02936 368 QAVYLLKKVL 377 (377)
T ss_pred HHHHHHHHhC
Confidence 9999998763
No 170
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.91 E-value=2.4e-22 Score=208.94 Aligned_cols=292 Identities=15% Similarity=0.191 Sum_probs=198.0
Q ss_pred HHHHHHHHHHH---hcccCCCCccCCCcEEEeCChHHHHHHHHHHhc-CCCCeEEEcCCCccchHHHHhh---hCCcEEE
Q 011801 89 PEFRQAVAKFM---GKGRGGRVTFDPDRIVMGGGATGANELIMFCLA-NPGDAFLVPSPYYAAFDRDLSW---RTGVQIV 161 (477)
Q Consensus 89 ~~lr~aia~~~---~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~-~~Gd~vlv~~P~y~~~~~~~~~---~~g~~~~ 161 (477)
+..+++++++. .+..| ++++++++|+|++++++.++.++. .+||.|+++.|.|+.+...++. ..|++++
T Consensus 108 ~g~~~~~~e~~~~la~l~g----~~~~~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~ 183 (447)
T PRK00451 108 QGTLQAIFEYQTMICELTG----MDVANASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVV 183 (447)
T ss_pred hHHHHHHHHHHHHHHHHhC----CCcceEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEE
Confidence 44666666433 55555 567789999999999999988874 7999999999999988876543 2489999
Q ss_pred EEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEe--cccccccccC
Q 011801 162 PVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVC--DEIYAATVFS 239 (477)
Q Consensus 162 ~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~--De~y~~~~~~ 239 (477)
.+++++ + .+|++++++++.+ ++++|++++| ||||.+.+ +++|.++|+++|+++|+ |.+..+. +.
T Consensus 184 ~v~~~~--~-~~d~~~l~~~i~~------~t~~v~l~~p-n~tG~v~~---l~~I~~~a~~~~~~~iv~~d~~~~g~-~~ 249 (447)
T PRK00451 184 EVPYED--G-VTDLEALEAAVDD------DTAAVVVQYP-NFFGVIED---LEEIAEIAHAGGALFIVGVDPVSLGL-LK 249 (447)
T ss_pred EecCCC--C-CCCHHHHHHhcCC------CeEEEEEECC-CCCCeeCC---HHHHHHHHHHCCCEEEEEcChHHhcc-CC
Confidence 999864 4 7899999998853 7899999999 99999977 88899999999999988 5443221 11
Q ss_pred CCCcccHHHhhhhccCCCCcEEEEe---cCCcccCCCCceEEEEEeCCHHHHHH--------------------------
Q 011801 240 SPKFTSVAEVIQEMDCNRDLIHIIY---SLSKDMGLPGFRVGIVYSFNDTVVNC-------------------------- 290 (477)
Q Consensus 240 ~~~~~s~~~~~~~~~~~~~~viiv~---SlSK~~g~~G~RvG~i~~~~~~i~~~-------------------------- 290 (477)
.+ . ..+..++++ +|||.+.+.|.|+||++++++.+...
T Consensus 250 ~~---------~----~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 316 (447)
T PRK00451 250 PP---------G----EYGADIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQ 316 (447)
T ss_pred Cc---------c----cCCCCEEEECCCcCCCCCCCCCCCchHHHhhHHHHhhCCCCEeeeecccCCCeeeEeecccccc
Confidence 00 0 123344554 78888888899999999866544431
Q ss_pred -HHHhcccCCCc--hHHHH-HHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEecCCceEEEE--eeccch
Q 011801 291 -GRKMSSFGLVS--SQTQY-LLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLKSNAGLFFW--MDLRHL 363 (477)
Q Consensus 291 -~~~~~~~~~vs--~~~q~-~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~~~~g~~~~--~~l~~~ 363 (477)
.++.......+ ...|. +++..+... .+..+++..+++.++++++.++|.+. |+++. .+++|.+ ++++.
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~aaa~~l~~~--~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~--~~~~~~~~~v~~~~- 391 (447)
T PRK00451 317 HIRREKATSNICTNQALNALAAAIYMSLL--GPEGLRELAEQNHQKAHYLAERLAEIGGVELF--DGPFFNEFVVRLPK- 391 (447)
T ss_pred ccccccccccccccHHHHHHHHHHHHHHH--CHHHHHHHHHHHHHHHHHHHHHHhhcCCEEec--CCCeEEEEEEecCC-
Confidence 01111111111 12232 222222210 02346778889999999999999988 67765 3344543 44431
Q ss_pred hhccCchHHHHHHHHHHHhcCeE-EeCCCCCCCCCCCEEEEEeccC-CHHHHHHHHHHHHHHH
Q 011801 364 LKEKTLEGEIALWRTIVNDVKLN-VSPGSSFQCTEPGWFRVCFANM-DDDTLQVALNRIAAFV 424 (477)
Q Consensus 364 ~~~~~~~~e~~l~~~ll~~~gI~-v~pg~~f~~~~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~ 424 (477)
. ..++.+.+.++ ||. ..+++.|.+...+++|+++... ++++++++++.|++++
T Consensus 392 -~------~~~~~~~L~~~-gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 392 -P------AEEVNEALLEK-GILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred -C------HHHHHHHHHhc-CCCCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 1 12577777665 655 3456666544457999999753 8999999999998764
No 171
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.91 E-value=9.4e-22 Score=200.19 Aligned_cols=209 Identities=18% Similarity=0.216 Sum_probs=151.9
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHH----HHhhhCCcEEEEE
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDR----DLSWRTGVQIVPV 163 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~----~~~~~~g~~~~~v 163 (477)
..+|++.+|++++ .+++++++|+++|+..++.+++++||.|+++.+.|++... .+... |++++.+
T Consensus 63 ~~~le~~la~l~g----------~~~~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~-G~~v~~v 131 (390)
T PRK08133 63 VTMFQERLAALEG----------AEACVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARF-GIETTFV 131 (390)
T ss_pred HHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHc-CcEEEEE
Confidence 6789999999876 3568999999999999999999999999999999876543 34444 9999888
Q ss_pred eccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCc
Q 011801 164 HCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKF 243 (477)
Q Consensus 164 ~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~ 243 (477)
+++ |++++++++++ ++|+|++++|+||||.+.+ +++|+++|+++|+++|+|++|+...+..
T Consensus 132 d~~-------d~~~l~~~i~~------~tklV~ie~p~NptG~v~d---l~~I~~la~~~gi~livD~t~~~~~~~~--- 192 (390)
T PRK08133 132 DLT-------DLDAWRAAVRP------NTKLFFLETPSNPLTELAD---IAALAEIAHAAGALLVVDNCFCTPALQQ--- 192 (390)
T ss_pred CCC-------CHHHHHHhcCc------CCeEEEEECCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCCcccccCC---
Confidence 753 67888887754 7899999999999999998 7889999999999999999997432211
Q ss_pred ccHHHhhhhccCCCCcEEEEecCCcccCCCCceE-EEEEeCCHHHHHHHHHhcccC-CCchHHHHHHHHhcCChhhHHHH
Q 011801 244 TSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRV-GIVYSFNDTVVNCGRKMSSFG-LVSSQTQYLLASMLSDDEFVDNF 321 (477)
Q Consensus 244 ~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~Rv-G~i~~~~~~i~~~~~~~~~~~-~vs~~~q~~~~~~L~~~~~~~~~ 321 (477)
++ . .+..++++|+||.++.+|.++ |+++++++.+......+...+ .+++..++++..-++.
T Consensus 193 -pl-~--------~g~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~~~~~~~g~~~~~~~a~~~l~gl~t------- 255 (390)
T PRK08133 193 -PL-K--------LGADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVFGFLRTAGPTLSPFNAWVFLKGLET------- 255 (390)
T ss_pred -ch-h--------hCCcEEEeecceeecCCcceEeEEEEcCHHHHHHHHHHHHHhCCCCCHHHHHHHHcccch-------
Confidence 11 1 123477899999999889998 556665544433333333333 2444554444333321
Q ss_pred HHHHHHHHHHHHHHHHHHHhhC
Q 011801 322 LVETSKRLAKRHHNFTKGLEQV 343 (477)
Q Consensus 322 ~~~~~~~l~~r~~~l~~~L~~~ 343 (477)
+..+.++..++...+.+.|++.
T Consensus 256 l~~R~~~~~~~a~~la~~L~~~ 277 (390)
T PRK08133 256 LSLRMEAHSANALALAEWLEAH 277 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC
Confidence 3344445556777888888876
No 172
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.91 E-value=1.3e-21 Score=199.16 Aligned_cols=290 Identities=14% Similarity=0.188 Sum_probs=191.6
Q ss_pred ccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhh---
Q 011801 79 IAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWR--- 155 (477)
Q Consensus 79 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~--- 155 (477)
..+|+++. ..+|++.+|++++. .+.|+ +++++.|+..++.+++++||.|+++.|.|+.....+...
T Consensus 55 y~r~~~pt-~~~Le~~lA~l~G~---------~~al~-~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~ 123 (386)
T PRK06767 55 YSRLGNPT-VKLFEERMAVLEGG---------EEALA-FGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEK 123 (386)
T ss_pred ccCCCCcc-hHHHHHHHHHHhCC---------CcEEE-ECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhh
Confidence 34565543 68999999999871 24444 455567999999899999999999999988765544322
Q ss_pred CCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccc
Q 011801 156 TGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAA 235 (477)
Q Consensus 156 ~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~ 235 (477)
.|+++..++. .|++++++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+.
T Consensus 124 ~gi~~~~~~~-------~d~~~l~~~i~~------~tklV~lesp~NptG~v~d---l~~I~~la~~~g~~vivD~a~a~ 187 (386)
T PRK06767 124 FMITHSFCDM-------ETEADIENKIRP------NTKLIFVETPINPTMKLID---LKQVIRVAKRNGLLVIVDNTFCS 187 (386)
T ss_pred cCeEEEEeCC-------CCHHHHHHhhCc------CceEEEEeCCCCCCceecC---HHHHHHHHHHcCCEEEEECCCcc
Confidence 2555444432 267888888754 7899999999999999999 77888888899999999999974
Q ss_pred cccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceE-EEEEeCCHHHHHHHHHhcc-c-CCCchHHHHHHHHhc
Q 011801 236 TVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRV-GIVYSFNDTVVNCGRKMSS-F-GLVSSQTQYLLASML 312 (477)
Q Consensus 236 ~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~Rv-G~i~~~~~~i~~~~~~~~~-~-~~vs~~~q~~~~~~L 312 (477)
..+. . ++ ..+..++++|+||.++.+|.|+ |+++++++.+....+.... . +.++++.++++...|
T Consensus 188 ~~~~-~---pl---------~~g~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~~~g~~~~~~~a~l~~~~L 254 (386)
T PRK06767 188 PYLQ-R---PL---------ELGCDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKDIGGIMAPFDAWLLLRGL 254 (386)
T ss_pred cccC-C---ch---------hcCCcEEEecCcceecCCCCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHcCC
Confidence 3222 1 11 1133477889999998889885 8899877666554433322 2 235666666655555
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEec------------CCceEEEEeeccchhhccCchHHHHHHHHH
Q 011801 313 SDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLK------------SNAGLFFWMDLRHLLKEKTLEGEIALWRTI 379 (477)
Q Consensus 313 ~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~------------~~~g~~~~~~l~~~~~~~~~~~e~~l~~~l 379 (477)
.. +..+.++..++...+.+.|+++ ++.... ..+| .+.++++... +....+...+
T Consensus 255 ~t-------l~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg-~vsf~l~~~~-----~~~~~f~~~l 321 (386)
T PRK06767 255 KT-------LAVRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGG-VISFSIKGGK-----EETQAFINDL 321 (386)
T ss_pred Cc-------HHHHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCc-eEEEEEcCCH-----HHHHHHHHhC
Confidence 43 2334456677888888899887 665321 1233 4556665311 1122344433
Q ss_pred HHhcCeEEeCCCCCCC---------------------CCCCEEEEEeccCCHHHHHHHHHHHHHHHh
Q 011801 380 VNDVKLNVSPGSSFQC---------------------TEPGWFRVCFANMDDDTLQVALNRIAAFVQ 425 (477)
Q Consensus 380 l~~~gI~v~pg~~f~~---------------------~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~ 425 (477)
+..++.++-|..... -.++.+|+|++. |+.+.+++-|.+++.
T Consensus 322 -~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGl---E~~~dl~~dl~~al~ 384 (386)
T PRK06767 322 -HFITIAVSLGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGL---ESWEDIVSDLEQALK 384 (386)
T ss_pred -CccEEecCCCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHh
Confidence 445666665543321 024689999995 556777777777765
No 173
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.91 E-value=2e-21 Score=197.12 Aligned_cols=218 Identities=19% Similarity=0.211 Sum_probs=161.4
Q ss_pred ccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhh---h
Q 011801 79 IAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSW---R 155 (477)
Q Consensus 79 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~---~ 155 (477)
..+|+++ ....|++++|++.+ .+.+++++|+++|+.+++.++++|||.|++++|+|++....+.. .
T Consensus 46 Y~R~~~p-t~~~L~~~lA~l~g----------~~~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~ 114 (386)
T PRK08045 46 YSRRGNP-TRDVVQRALAELEG----------GAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKR 114 (386)
T ss_pred eeCCCCc-cHHHHHHHHHHHhC----------CCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhh
Confidence 4567665 46899999999986 23699999999999999999999999999999999864433221 2
Q ss_pred CCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccc
Q 011801 156 TGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAA 235 (477)
Q Consensus 156 ~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~ 235 (477)
.|+++..++ ..|++++++++++ ++|+|++++|+||||.+++ +++|.++|+++|+++|+|++|..
T Consensus 115 ~gi~v~~vd-------~~d~e~l~~~l~~------~tklV~l~sP~NPtG~v~d---i~~I~~ia~~~g~~vivDeay~~ 178 (386)
T PRK08045 115 GCYRVLFVD-------QGDEQALRAALAE------KPKLVLVESPSNPLLRVVD---IAKICHLAREAGAVSVVDNTFLS 178 (386)
T ss_pred CCeEEEEeC-------CCCHHHHHHhccc------CCeEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCc
Confidence 245655543 1478888888754 7899999999999999999 67788888899999999999975
Q ss_pred cccCCCCcccHHHhhhhccCCCCcEEEEecCCcccC-CCCceEEEEEeCCHHHHHHHHHh-cc-cCCCchHHHHHHHHhc
Q 011801 236 TVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMG-LPGFRVGIVYSFNDTVVNCGRKM-SS-FGLVSSQTQYLLASML 312 (477)
Q Consensus 236 ~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g-~~G~RvG~i~~~~~~i~~~~~~~-~~-~~~vs~~~q~~~~~~L 312 (477)
.... .++ .. +..++++|++|.++ .++.+.|++++.++.+.+.++.. .. ...++++.++++...|
T Consensus 179 ~~~~----~pl-~~--------gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~~~g~~~~p~~~~l~~rgl 245 (386)
T PRK08045 179 PALQ----NPL-AL--------GADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGL 245 (386)
T ss_pred cccC----Cch-hh--------CCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhh
Confidence 3221 111 11 22378999999985 56788999988666555544332 22 2346788888888888
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 011801 313 SDDEFVDNFLVETSKRLAKRHHNFTKGLEQV 343 (477)
Q Consensus 313 ~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~ 343 (477)
+. +..+.++..+....+.+.|+++
T Consensus 246 ~t-------l~~R~~~~~~na~~la~~L~~~ 269 (386)
T PRK08045 246 RT-------LVPRMELAQRNAQAIVKYLQTQ 269 (386)
T ss_pred cc-------HHHHHHHHHHHHHHHHHHHHcC
Confidence 76 3445566677778888888876
No 174
>PRK06460 hypothetical protein; Provisional
Probab=99.90 E-value=1.7e-21 Score=197.34 Aligned_cols=210 Identities=17% Similarity=0.228 Sum_probs=144.4
Q ss_pred CCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCcc----chHHHHhhhCCcEEE
Q 011801 86 HGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYA----AFDRDLSWRTGVQIV 161 (477)
Q Consensus 86 ~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~----~~~~~~~~~~g~~~~ 161 (477)
....+|++++|++.+ . ...+++++| ++|+..++.++++|||.|+++.|.|+ .|...++.. |+++.
T Consensus 45 p~~~~L~~~lA~l~g--------~-~~~v~~~sG-~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~-G~~v~ 113 (376)
T PRK06460 45 PTVLELTKKIVELEN--------A-EMGVAFSSG-MGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNW-GVNVD 113 (376)
T ss_pred ccHHHHHHHHHHHhC--------C-CcEEEeCCH-HHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhh-CcEEE
Confidence 357899999999987 2 234555444 68999999999999999999987553 444556655 99988
Q ss_pred EEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCC
Q 011801 162 PVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSP 241 (477)
Q Consensus 162 ~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~ 241 (477)
.++.+. .+.+++.+ ..++|+|++++|+||||.+++ +++|+++|+++|+++|+||+|+.. +..
T Consensus 114 ~~~~~~-------~~~l~~~~------~~~tklV~l~sp~NPtG~v~d---~~~I~~la~~~g~~vivDea~~~~-~~~- 175 (376)
T PRK06460 114 ASNPGS-------DNIIEKAK------SKRYDVVFVENITNPLLRVVD---ITELSKVCKENGSILIVDATFSTP-INQ- 175 (376)
T ss_pred EECCCC-------HHHHHHhc------CCCceEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCcCcc-ccC-
Confidence 776431 22333322 237899999999999999999 556788888999999999999742 111
Q ss_pred CcccHHHhhhhccCCCCcEEEEecCCcccC-CCCceEEEEEeCCHHHHHHHHHh-cccCC-CchHHHHHHHHhcCChhhH
Q 011801 242 KFTSVAEVIQEMDCNRDLIHIIYSLSKDMG-LPGFRVGIVYSFNDTVVNCGRKM-SSFGL-VSSQTQYLLASMLSDDEFV 318 (477)
Q Consensus 242 ~~~s~~~~~~~~~~~~~~viiv~SlSK~~g-~~G~RvG~i~~~~~~i~~~~~~~-~~~~~-vs~~~q~~~~~~L~~~~~~ 318 (477)
.+ + ..+.+++++|+||.++ ..|.|+||++++++ +.+.+++. ..++. .++. .+..++...++
T Consensus 176 --~~---l------~~~~divv~S~sK~l~G~~~~~~G~~~~~~~-l~~~l~~~~~~~g~~~~~~---~a~~~l~~~~~- 239 (376)
T PRK06460 176 --KP---L------ELGADIVVHSASKFLAGHNDVIAGLAAGYGK-LLNVIDQMRRTLGTSLDPH---AAYLTLRGIKT- 239 (376)
T ss_pred --Ch---h------hcCCCEEEeecceeccCCCCceEEEEecCHH-HHHHHHHHHHhcCCCCCHH---HHHHHHhchhh-
Confidence 11 1 1234688999999985 22378999998554 54544433 33332 2322 22333344333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhC
Q 011801 319 DNFLVETSKRLAKRHHNFTKGLEQV 343 (477)
Q Consensus 319 ~~~~~~~~~~l~~r~~~l~~~L~~~ 343 (477)
++.+.+++.++++.+.+.|++.
T Consensus 240 ---l~~r~~~~~~n~~~l~~~L~~~ 261 (376)
T PRK06460 240 ---LKIRMDVINRNAEQIAEFLEGH 261 (376)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHcC
Confidence 5666777888889999999876
No 175
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.90 E-value=3.4e-21 Score=196.39 Aligned_cols=313 Identities=15% Similarity=0.151 Sum_probs=199.4
Q ss_pred cCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEE
Q 011801 82 FQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIV 161 (477)
Q Consensus 82 Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~ 161 (477)
|+...++.+|++++|+|++. .+.+++++|.+... .++.+++++||.|+++++.|+.+...+... +.+++
T Consensus 39 yg~~~~~~~LE~~lA~~~g~---------e~al~~~sG~~a~~-~~i~~l~~~GD~Vl~~~~~h~s~~~~~~l~-~~~~~ 107 (392)
T PLN03227 39 YGTIDAHLELEQCMAEFLGT---------ESAILYSDGASTTS-STVAAFAKRGDLLVVDRGVNEALLVGVSLS-RANVR 107 (392)
T ss_pred cCChHHHHHHHHHHHHHhCC---------CcEEEecCcHHHHH-HHHHHhCCCCCEEEEeccccHHHHHHHHHc-CCeEE
Confidence 77666889999999999972 36677777766555 677778999999999999999987776555 77777
Q ss_pred EEeccCCCCcccCHHHHHHHHHHHHH--------hCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccc
Q 011801 162 PVHCDISNNFKITREALEAAYERAQE--------ASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIY 233 (477)
Q Consensus 162 ~v~~~~~~~f~i~~~~l~~~~~~~~~--------~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y 233 (477)
.++.. |.+.+++.++.... ...++++|++.++.||+|.+.+ +++|.++|+++|+++|+||+|
T Consensus 108 ~~~~~-------d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~---l~~i~~l~~~~g~~livDe~~ 177 (392)
T PLN03227 108 WFRHN-------DMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAP---LKELVALKEEFHYRLILDESF 177 (392)
T ss_pred EeCCC-------CHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccC---HHHHHHHHHHcCCEEEEECcc
Confidence 66642 34455554433221 1236788899999999999999 778999999999999999999
Q ss_pred cccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHh---cccCC-CchHHHHHHH
Q 011801 234 AATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKM---SSFGL-VSSQTQYLLA 309 (477)
Q Consensus 234 ~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~---~~~~~-vs~~~q~~~~ 309 (477)
+ +...++......+... .....+..+++.|+||.+|.. .|+++++++ +.+..+.. ..|+. .++..+.++.
T Consensus 178 ~-~g~~g~~G~g~~~~~g-~~p~~~~Div~~slsk~~g~~---gg~v~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~aa~ 251 (392)
T PLN03227 178 S-FGTLGKSGRGSLEHAG-LKPMVHAEIVTFSLENAFGSV---GGMTVGSEE-VVDHQRLSGSGYCFSASAPPFLAKADA 251 (392)
T ss_pred c-ccccCCCCCcHHHHcC-CCCCCCceEEEeechhhhhcc---CcEEecCHH-HHHHHHHhCcCccccCCCCHHHHHHHH
Confidence 7 3222322122333211 000124478889999988644 488887554 44333322 22332 2344455544
Q ss_pred HhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEe----------cCCceEEEEeeccchhhccCchH---HHHHH
Q 011801 310 SMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCL----------KSNAGLFFWMDLRHLLKEKTLEG---EIALW 376 (477)
Q Consensus 310 ~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~----------~~~~g~~~~~~l~~~~~~~~~~~---e~~l~ 376 (477)
..+.... + .++..++++++.+++.+.|++.++... ....|+++.+.+.+......... -.+++
T Consensus 252 ~al~~~~--~--~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~ 327 (392)
T PLN03227 252 TATAGEL--A--GPQLLNRLHDSIANLYSTLTNSSHPYALKLRNRLVITSDPISPIIYLRLSDQEATRRTDETLILDQIA 327 (392)
T ss_pred HHHHHHh--c--CHHHHHHHHHHHHHHHHHHHhcCCccccccccccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHH
Confidence 3332211 1 134456777888888888876543311 11234566666654211111111 02455
Q ss_pred HHHHHhcCeEEeCCCC-----CCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHhh
Q 011801 377 RTIVNDVKLNVSPGSS-----FQCTEPGWFRVCFAN-MDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 377 ~~ll~~~gI~v~pg~~-----f~~~~~~~~Rl~~~~-~~~e~l~~~l~~l~~~~~~ 426 (477)
+.++ ++||.+.+... +....+..+|+++.. .++|++++++++|++++++
T Consensus 328 ~~~~-~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~eei~~~~~~l~~~~~~ 382 (392)
T PLN03227 328 HHSL-SEGVAVVSTGGHVKKFLQLVPPPCLRVVANASHTREDIDKLLTVLGEAVEA 382 (392)
T ss_pred HHHH-HCCCEEEecccccCCcCCCCCCceEEEEecCCCCHHHHHHHHHHHHHHHHH
Confidence 5555 45999875321 122335789999966 4999999999999999865
No 176
>PRK14012 cysteine desulfurase; Provisional
Probab=99.90 E-value=7.1e-22 Score=202.80 Aligned_cols=293 Identities=16% Similarity=0.218 Sum_probs=198.7
Q ss_pred CcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhc----CCCCeEEEcCCCccchHHHH---hhhCCcE
Q 011801 87 GLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLA----NPGDAFLVPSPYYAAFDRDL---SWRTGVQ 159 (477)
Q Consensus 87 G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~----~~Gd~vlv~~P~y~~~~~~~---~~~~g~~ 159 (477)
...++|+.+|++++ .++++|++++|+|+++.+++.++. ++||.|+++.+.|+.+...+ +.. |++
T Consensus 50 ~~~~~r~~ia~~~g--------~~~~~v~~~~g~t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~-g~~ 120 (404)
T PRK14012 50 AVDIARNQIADLIG--------ADPREIVFTSGATESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLERE-GFE 120 (404)
T ss_pred HHHHHHHHHHHHcC--------cCcCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhC-CCE
Confidence 35688899999886 567889999999999999887764 78999999999998765433 334 999
Q ss_pred EEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccC
Q 011801 160 IVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFS 239 (477)
Q Consensus 160 ~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~ 239 (477)
++.++.+. ++.+|+++|++++.+ ++++|++++++||||.+.+ +++|.++|+++|+++|+|++++ ++
T Consensus 121 ~~~v~~~~--~g~~d~~~l~~~i~~------~t~lv~~~~~~n~tG~~~~---~~~I~~la~~~g~~vivD~a~~---~g 186 (404)
T PRK14012 121 VTYLDPQS--NGIIDLEKLEAAMRD------DTILVSIMHVNNEIGVIQD---IAAIGEICRERGIIFHVDAAQS---VG 186 (404)
T ss_pred EEEEccCC--CCcCCHHHHHHhcCC------CCEEEEEECcCCCccchhh---HHHHHHHHHHcCCEEEEEcchh---cC
Confidence 99998763 567899999998864 7889999999999999998 7888889999999999999997 32
Q ss_pred CCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhc--------ccCCCchHHHHHHHHh
Q 011801 240 SPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMS--------SFGLVSSQTQYLLASM 311 (477)
Q Consensus 240 ~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~--------~~~~vs~~~q~~~~~~ 311 (477)
..+ ..+.. .+..+++.|++|.+| |+ ++|+++.+++.......... ..++.+......+.+.
T Consensus 187 ~~~-~~~~~--------~~~D~~~~s~~K~~g-p~-g~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~a 255 (404)
T PRK14012 187 KVP-IDLSK--------LKVDLMSFSAHKIYG-PK-GIGALYVRRKPRVRLEAQMHGGGHERGMRSGTLPTHQIVGMGEA 255 (404)
T ss_pred Ccc-cCccc--------CCCCEEEEehhhccC-CC-ceEEEEEecCCCCCCCceecCCCccCCccCCCcCHHHHHHHHHH
Confidence 221 12111 123366779999887 54 69999887654321111000 0111222222222222
Q ss_pred cCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEecC-----CceEEEEeeccchhhccCchHHHHHHHHHHHhcCe
Q 011801 312 LSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLKS-----NAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKL 385 (477)
Q Consensus 312 L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~~-----~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI 385 (477)
+.. ++....+..++.++.++++.+.|+++ ++.+... ...+++|+.+... + ++... + .++
T Consensus 256 l~~---~~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-------~--~~~~~-l--~~~ 320 (404)
T PRK14012 256 ARI---AKEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFNYVEG-------E--SLIMA-L--KDL 320 (404)
T ss_pred HHH---HHhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEeCcCH-------H--HHHHh-C--CCe
Confidence 221 12223445566677777788888765 4544321 2234566665321 1 23333 2 378
Q ss_pred EEeCCCCCCCC-----------------CCCEEEEEeccC-CHHHHHHHHHHHHHHHhhhh
Q 011801 386 NVSPGSSFQCT-----------------EPGWFRVCFANM-DDDTLQVALNRIAAFVQQDK 428 (477)
Q Consensus 386 ~v~pg~~f~~~-----------------~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~~~~ 428 (477)
.|..|..|.+. .++.+|++++.. ++++++.+++.|++++++.+
T Consensus 321 ~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~~~~~~~ 381 (404)
T PRK14012 321 AVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRKSIGKLR 381 (404)
T ss_pred EEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 88888776432 136899999874 99999999999999987654
No 177
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.90 E-value=6.7e-22 Score=202.33 Aligned_cols=270 Identities=16% Similarity=0.168 Sum_probs=178.9
Q ss_pred CCcEEEeCChHHHHHHHHHHhcC---------CC-CeEEEcCCCccchHHHHhhhCCcE------------EEEEeccCC
Q 011801 111 PDRIVMGGGATGANELIMFCLAN---------PG-DAFLVPSPYYAAFDRDLSWRTGVQ------------IVPVHCDIS 168 (477)
Q Consensus 111 ~~~i~~t~G~t~al~~i~~~l~~---------~G-d~vlv~~P~y~~~~~~~~~~~g~~------------~~~v~~~~~ 168 (477)
.+.+++++++++|++.++..... +| +.|+..+-+|++........++.. +..++.
T Consensus 97 ~~~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 173 (396)
T PRK04073 97 KDMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY--- 173 (396)
T ss_pred CCeEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCC---
Confidence 36899999999999999887521 34 678888777776542221111211 111221
Q ss_pred CCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHH-HHHHHHHHHHhcCeEEEecccccccccCCCCcccHH
Q 011801 169 NNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRD-TLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVA 247 (477)
Q Consensus 169 ~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~-~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~ 247 (477)
. |++++++++.+ ++++|+++.|+||+|.+++.+ .+++|.++|+++|+++|+||+|.++...+..+. .
T Consensus 174 ---~-d~~~l~~~i~~------~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~--~ 241 (396)
T PRK04073 174 ---G-DLEALKAAITP------NTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFA--C 241 (396)
T ss_pred ---C-CHHHHHHhccc------CeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHH--h
Confidence 1 67888887753 688888888899999998765 699999999999999999999997544332211 1
Q ss_pred HhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHh--cccCCCchHHHHHHHHhcCChhhHHHHHHHH
Q 011801 248 EVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKM--SSFGLVSSQTQYLLASMLSDDEFVDNFLVET 325 (477)
Q Consensus 248 ~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~--~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~ 325 (477)
+.. +..++ +.+|||.+|.+|+|+||++++++ +.+.+... ......+++.|.++.+.|+..+ + ...
T Consensus 242 ~~~---~~~pd----i~~~sK~lg~gg~~ig~~~~~~~-i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~--~---~~l 308 (396)
T PRK04073 242 DWD---NVTPD----MYILGKALGGGVFPISCVAANRD-ILGVFTPGSHGSTFGGNPLACAVSIAALEVLE--E---EKL 308 (396)
T ss_pred hhc---CCCCC----EEEecccccCCCCcceEEEEcHH-HHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHH--h---cCH
Confidence 111 11222 33689999988899999999654 44444321 1222367888888888775211 1 112
Q ss_pred HHHHHHHHHHHHHHHhhCC---CeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEE
Q 011801 326 SKRLAKRHHNFTKGLEQVG---INCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFR 402 (477)
Q Consensus 326 ~~~l~~r~~~l~~~L~~~g---i~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~R 402 (477)
.++.+++.+++.+.|++++ +....+. |+|++++++.. ..++.+.+++ +||.+.+. +++++|
T Consensus 309 ~~~~~~~~~~l~~~L~~l~~~~i~~~~~~-g~~~~~~~~~~--------~~~~~~~l~~-~Gv~~~~~------~~~~iR 372 (396)
T PRK04073 309 PERSLELGEYFKEQLKEIDNPMIKEVRGR-GLFIGVELNEP--------ARPYCEALKE-EGLLCKET------HETVIR 372 (396)
T ss_pred HHHHHHHHHHHHHHHHhhcCCcccceecc-eEEEEEEecch--------HHHHHHHHHH-CCeEEecC------CCCEEE
Confidence 2344556677888887753 3333344 67889988631 1246666654 59999763 246899
Q ss_pred EEecc-CCHHHHHHHHHHHHHHH
Q 011801 403 VCFAN-MDDDTLQVALNRIAAFV 424 (477)
Q Consensus 403 l~~~~-~~~e~l~~~l~~l~~~~ 424 (477)
+++.. .+++++++++++|++++
T Consensus 373 i~p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 373 FAPPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred EECCcccCHHHHHHHHHHHHHHh
Confidence 99754 39999999999999876
No 178
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.90 E-value=1.6e-21 Score=200.05 Aligned_cols=294 Identities=17% Similarity=0.225 Sum_probs=202.4
Q ss_pred CcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhc----CCCCeEEEcCCCccchHHHH---hhhCCcE
Q 011801 87 GLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLA----NPGDAFLVPSPYYAAFDRDL---SWRTGVQ 159 (477)
Q Consensus 87 G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~----~~Gd~vlv~~P~y~~~~~~~---~~~~g~~ 159 (477)
.+.++|+.++++++ .++++|++|+|+|+++.+++.++. ++||.|+++.+.|+.+...+ +.. |++
T Consensus 48 ~~~~~r~~la~~~g--------~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~-g~~ 118 (402)
T TIGR02006 48 AVENARNQVAELIG--------ADSREIVFTSGATESNNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLERE-GFE 118 (402)
T ss_pred HHHHHHHHHHHHhC--------CCCCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhc-CCE
Confidence 46778888999876 568899999999999999887653 68999999999998765443 334 999
Q ss_pred EEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccC
Q 011801 160 IVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFS 239 (477)
Q Consensus 160 ~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~ 239 (477)
++.++++. ++.+|++++++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++++. .
T Consensus 119 v~~v~~~~--~~~~d~~~l~~~l~~------~~~lv~v~~~~n~tG~~~~---~~~I~~l~~~~g~~livD~a~a~---g 184 (402)
T TIGR02006 119 VTYLPPKS--NGLIDLEELKAAIRD------DTILVSIMHVNNEIGVIQD---IAAIGEICRERKVFFHVDAAQSV---G 184 (402)
T ss_pred EEEEccCC--CCcCCHHHHHHhcCC------CCEEEEEECCCcCceeccc---HHHHHHHHHHcCCEEEEEcchhc---C
Confidence 99998763 467899999988754 6889999999999999998 77888999999999999999973 2
Q ss_pred CCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHh--------cccCCCchHHHHHHHHh
Q 011801 240 SPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKM--------SSFGLVSSQTQYLLASM 311 (477)
Q Consensus 240 ~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~--------~~~~~vs~~~q~~~~~~ 311 (477)
..+ ..+. ..+..+++.|.+|.+|.+| +|+++..++......... ...++.+.....++...
T Consensus 185 ~~~-~~~~--------~~~~D~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~a 253 (402)
T TIGR02006 185 KIP-INVN--------ELKVDLMSISGHKIYGPKG--IGALYVRRKPRVRLEALIHGGGHERGMRSGTLPTHQIVGMGEA 253 (402)
T ss_pred Ccc-cCcc--------ccCCCEEEEehhhhcCCCc--eEEEEEccCCCCCCCceecCCCccCCccCCCccHHHHHHHHHH
Confidence 211 1211 1234467789999887446 899888654332111000 01123344444444444
Q ss_pred cCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEecCC-----ceEEEEeeccchhhccCchHHHHHHHHHHHhcCe
Q 011801 312 LSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLKSN-----AGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKL 385 (477)
Q Consensus 312 L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~~~-----~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI 385 (477)
++- +...++...+++++.++.+.+.|+++ ++.+..+. ..+.+ .++. .. .+ ++... + .+|
T Consensus 254 l~~---~~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~~~v--~f~~-~~-----~~-~~~~~-l--~~i 318 (402)
T TIGR02006 254 FRI---AKEEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPGNLNV--SFNY-VE-----GE-SLIMA-L--KDL 318 (402)
T ss_pred HHH---HHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEE--EEeC-cC-----HH-HHHHh-c--CCE
Confidence 432 23345666778888889999998875 55554221 11122 2221 11 11 23222 2 489
Q ss_pred EEeCCCCCCCC-----------------CCCEEEEEeccC-CHHHHHHHHHHHHHHHhhhhc
Q 011801 386 NVSPGSSFQCT-----------------EPGWFRVCFANM-DDDTLQVALNRIAAFVQQDKE 429 (477)
Q Consensus 386 ~v~pg~~f~~~-----------------~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~~~~~ 429 (477)
.++.|..|... ..+++|+|++.. |+++++.+++.|+++++..+.
T Consensus 319 ~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~~~~~~~~ 380 (402)
T TIGR02006 319 AVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKSAIDKLRE 380 (402)
T ss_pred EEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 99998877542 137899999876 899999999999999876543
No 179
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.90 E-value=1.1e-21 Score=202.63 Aligned_cols=346 Identities=13% Similarity=0.109 Sum_probs=213.2
Q ss_pred CCCCcccccccccc--ccc--cHHHHHHHHHhCCCCcccccccccccccccccC-CCCCcHHHHHHHHHHHhcccCCCCc
Q 011801 34 TQNPGGVIQLGLAE--NQL--CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQ-DYHGLPEFRQAVAKFMGKGRGGRVT 108 (477)
Q Consensus 34 ~~~~~~~i~l~~~~--n~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~-~~~G~~~lr~aia~~~~~~~g~~~~ 108 (477)
+.+.+..||+..+. +.+ +.+.+.+.+++.-+ +...|. +..+..+|+++|++++..
T Consensus 44 d~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~-------------~~~~~~~~~~~~~~lae~l~~~~~~------- 103 (423)
T TIGR00713 44 DVDGNEYIDYVLSWGPLILGHAHPRVVEAVKEALE-------------RGTSYGAPTEAEILLAKEIISRVPS------- 103 (423)
T ss_pred eCCCCEEEEccccccccccCCCCHHHHHHHHHHHH-------------hCCcCCCCCHHHHHHHHHHHHhCCc-------
Confidence 44556788886543 333 45666666665311 112333 345788999999998741
Q ss_pred cCCCcEEEeCChHHHHHHHHHHh--cCCCCeEEEcCCCccchHHHHhhhC--CcEEEEEeccC-------CCCcc---cC
Q 011801 109 FDPDRIVMGGGATGANELIMFCL--ANPGDAFLVPSPYYAAFDRDLSWRT--GVQIVPVHCDI-------SNNFK---IT 174 (477)
Q Consensus 109 ~~~~~i~~t~G~t~al~~i~~~l--~~~Gd~vlv~~P~y~~~~~~~~~~~--g~~~~~v~~~~-------~~~f~---i~ 174 (477)
.++|++++|+++|++.+++.. ....++|+..+++|+++...+...+ +......+..+ .+.+. -|
T Consensus 104 --~~~v~~~~sGseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 181 (423)
T TIGR00713 104 --VEMVRFVNSGTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYND 181 (423)
T ss_pred --ccEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCC
Confidence 368999999999999988753 2245899999999998754332210 11110001000 00011 16
Q ss_pred HHHHHHHHHHHHHhCCCeeEEEEe-CCCCCcccCCC-HHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhh
Q 011801 175 REALEAAYERAQEASINIKGLIIT-NPSNPLGTTLD-RDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQE 252 (477)
Q Consensus 175 ~~~l~~~~~~~~~~~~~~k~vii~-nP~NPtG~~~~-~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~ 252 (477)
++++++++++. ..++++|++. .|+| +|.+.+ .+.+++|.++|++||+++|+||+|.++.++ ..+. .+..
T Consensus 182 ~~~l~~~i~~~---~~~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g-~~~~--~~~~-- 252 (423)
T TIGR00713 182 LEALEEVFEEY---GEEIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVA-LGGA--QEYF-- 252 (423)
T ss_pred HHHHHHHHHHc---CCcEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccC-cchh--HHHh--
Confidence 88998888632 2378888774 7888 798887 688999999999999999999999876443 2211 1111
Q ss_pred ccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHH---h--cccCCCchHHHHHHHHhcCChhhHHHHHHHHHH
Q 011801 253 MDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRK---M--SSFGLVSSQTQYLLASMLSDDEFVDNFLVETSK 327 (477)
Q Consensus 253 ~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~---~--~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~ 327 (477)
+..++ +.+|||.+| +|+|+||++++++ +.+.+.. . .+....++++|.++.+.|+..+- +.+.+..++
T Consensus 253 -~~~pD----i~t~sK~l~-~G~pig~v~~~~~-i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~-~~~~~~~~~ 324 (423)
T TIGR00713 253 -GVEPD----LTTLGKIIG-GGLPVGAFGGRRE-IMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDE-EGVYTELDE 324 (423)
T ss_pred -CCCcc----hhhhhhhhc-CCCceeeeeEHHH-HHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhc-ccHHHHHHH
Confidence 11333 238999999 9999999999654 4444432 1 11123677888887777652210 113445555
Q ss_pred HHHHHHHHHHHHHhhCCCeEecCCceEEEEeecc--chhh---c--cCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCE
Q 011801 328 RLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLR--HLLK---E--KTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGW 400 (477)
Q Consensus 328 ~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~--~~~~---~--~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~ 400 (477)
..+..++.+.+.+++.++.......|.++.+.+. ...+ . .+...-..++..+++ +||.+.++ .| +.
T Consensus 325 ~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~-~~-----~~ 397 (423)
T TIGR00713 325 LAKRLAEGLSEVLEDTGIPHTVNRVGSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEMLD-KGVFLPPS-QF-----EA 397 (423)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEeeccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHHH-CCeEEecC-Cc-----cc
Confidence 5666667777777777765432222333333332 1100 0 000111245566665 69998654 22 35
Q ss_pred EEEEeccCCHHHHHHHHHHHHHHHhh
Q 011801 401 FRVCFANMDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 401 ~Rl~~~~~~~e~l~~~l~~l~~~~~~ 426 (477)
+|+++. .+++++++++++|.+++++
T Consensus 398 ~~l~~~-~t~~~i~~~~~~l~~~l~~ 422 (423)
T TIGR00713 398 CFLSAA-HTEEDIENTIEAAEEVFAE 422 (423)
T ss_pred eeeECC-CCHHHHHHHHHHHHHHHhh
Confidence 788887 5999999999999998864
No 180
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.90 E-value=3e-21 Score=195.48 Aligned_cols=211 Identities=19% Similarity=0.271 Sum_probs=157.4
Q ss_pred CcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHH----HhhhCCcEEEE
Q 011801 87 GLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRD----LSWRTGVQIVP 162 (477)
Q Consensus 87 G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~----~~~~~g~~~~~ 162 (477)
-..+|++++|++.+ .+..++++++++|+..++.+++++||.|+++.+.|.+.... ++.. |+++..
T Consensus 41 ~~~~le~~la~l~g----------~~~a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~-g~~~~~ 109 (369)
T cd00614 41 TVDALEKKLAALEG----------GEAALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKL-GIEVTF 109 (369)
T ss_pred hHHHHHHHHHHHHC----------CCCEEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhc-CeEEEE
Confidence 46899999999886 24577778889999999999999999999999999876543 3334 888887
Q ss_pred EeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCC
Q 011801 163 VHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPK 242 (477)
Q Consensus 163 v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~ 242 (477)
++.+ +++++++++++ ++++|++.+|+||+|.+.+ +++|+++|+++|+++|+|++|+..++..
T Consensus 110 v~~~-------d~~~l~~~i~~------~~~~v~~e~~~np~g~~~d---l~~i~~la~~~g~~livD~t~~~~~~~~-- 171 (369)
T cd00614 110 VDPD-------DPEALEAAIKP------ETKLVYVESPTNPTLKVVD---IEAIAELAHEHGALLVVDNTFATPYLQR-- 171 (369)
T ss_pred eCCC-------CHHHHHHhcCC------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcchhcCC--
Confidence 7743 47888887753 7899999999999999998 7888999999999999999997543311
Q ss_pred cccHHHhhhhccCCCCcEEEEecCCcccCCCC-ceEEEEEeCCHHHHHHHHHhc-cc-CCCchHHHHHHHHhcCChhhHH
Q 011801 243 FTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPG-FRVGIVYSFNDTVVNCGRKMS-SF-GLVSSQTQYLLASMLSDDEFVD 319 (477)
Q Consensus 243 ~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G-~RvG~i~~~~~~i~~~~~~~~-~~-~~vs~~~q~~~~~~L~~~~~~~ 319 (477)
+ + ..+..++++|+||.+|.+| .+.|+++++++.+.+.++... .+ +.+++..++++...|+.
T Consensus 172 --~---~------~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~t----- 235 (369)
T cd00614 172 --P---L------ELGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLALGTILSPFDAWLLLRGLKT----- 235 (369)
T ss_pred --h---h------hhCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHHHhhCCCCCHHHHHHHHcCCCC-----
Confidence 1 1 1234578999999998666 889999997745555444332 22 23566666666555543
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCC
Q 011801 320 NFLVETSKRLAKRHHNFTKGLEQVG 344 (477)
Q Consensus 320 ~~~~~~~~~l~~r~~~l~~~L~~~g 344 (477)
+..+.++..++.+.+.+.|++++
T Consensus 236 --l~~r~~~~~~na~~la~~L~~~~ 258 (369)
T cd00614 236 --LPLRMERHSENALKVAEFLEKHP 258 (369)
T ss_pred --HHHHHHHHHHHHHHHHHHHHcCC
Confidence 23345566777788888888774
No 181
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.90 E-value=5.2e-21 Score=194.28 Aligned_cols=216 Identities=19% Similarity=0.293 Sum_probs=152.9
Q ss_pred cccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchH----HHHhhh
Q 011801 80 AIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFD----RDLSWR 155 (477)
Q Consensus 80 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~----~~~~~~ 155 (477)
.+|+.+ -..+|++.+|++.+ .+.+++++++++|+.+++.+++++||.|+++.+.|++.. ..+...
T Consensus 49 ~r~~~p-~~~~le~~la~l~g----------~~~~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~ 117 (380)
T TIGR01325 49 SRYANP-TVAAFEERIAALEG----------AERAVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRF 117 (380)
T ss_pred ecCCCc-hHHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHh
Confidence 456543 36899999999876 256788999999999999999999999999999887533 334445
Q ss_pred CCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccc
Q 011801 156 TGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAA 235 (477)
Q Consensus 156 ~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~ 235 (477)
|+++..++.+ |++++++++++ ++++|++++|+||+|.+.+ +++|.++|+++|+++|+|++|+.
T Consensus 118 -g~~v~~v~~~-------d~~~l~~~i~~------~tklV~le~p~np~g~~~d---l~~I~~la~~~gi~livD~a~~~ 180 (380)
T TIGR01325 118 -GIEVSFVDPT-------DLNAWEAAVKP------NTKLVFVETPSNPLGELVD---IAALAELAHAIGALLVVDNVFAT 180 (380)
T ss_pred -CCEEEEECCC-------CHHHHHHhcCC------CceEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcc
Confidence 9998888753 57888877643 7899999999999999998 78888889999999999999975
Q ss_pred cccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceE-EEEEeCCHHHHHHHHHhcccCC-CchHHHHHHHHhcC
Q 011801 236 TVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRV-GIVYSFNDTVVNCGRKMSSFGL-VSSQTQYLLASMLS 313 (477)
Q Consensus 236 ~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~Rv-G~i~~~~~~i~~~~~~~~~~~~-vs~~~q~~~~~~L~ 313 (477)
..+.. ++ . .+..+++.|+||.++-+|.++ |+++++++.+......+...+. +++...+++..-+.
T Consensus 181 ~~~~~----pl-~--------~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~~~~g~~~~p~~a~~~l~~l~ 247 (380)
T TIGR01325 181 PVLQQ----PL-K--------LGADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVAVYLRHTGPAMSPFNAWVLLKGLE 247 (380)
T ss_pred cccCC----ch-h--------hCCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHHHHHHhhCCCCCHHHHHHHHhccC
Confidence 32221 11 1 133477889999998788887 6677655433333323333332 34444333333332
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 011801 314 DDEFVDNFLVETSKRLAKRHHNFTKGLEQV 343 (477)
Q Consensus 314 ~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~ 343 (477)
. +..+.++..+.+..+.+.|+++
T Consensus 248 t-------l~~r~~~~~~~a~~la~~L~~~ 270 (380)
T TIGR01325 248 T-------LSLRMQKQFDSALAIAEWLQAQ 270 (380)
T ss_pred c-------HHHHHHHHHHHHHHHHHHHHcC
Confidence 2 3334455666777788888876
No 182
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.90 E-value=2.5e-21 Score=199.66 Aligned_cols=312 Identities=12% Similarity=0.087 Sum_probs=192.0
Q ss_pred HHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHh---cCCCCeEEEcCCCccchHHHHhhhCCc---------
Q 011801 91 FRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCL---ANPGDAFLVPSPYYAAFDRDLSWRTGV--------- 158 (477)
Q Consensus 91 lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l---~~~Gd~vlv~~P~y~~~~~~~~~~~g~--------- 158 (477)
...++|+++.+..+. ... +++++++++++|++.+++.. .++ ..|+...++|++....+...++.
T Consensus 85 ~~~~la~~l~~~~~~--~~~-~~~~f~~sGsea~e~Alklar~~~~r-~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~ 160 (425)
T PRK08088 85 PYLELCEKMNQKVPG--DFA-KKTLLVTTGSEAVENAVKIARAATKR-SGVIAFTGAYHGRTHYTLALTGKVNPYSAGMG 160 (425)
T ss_pred HHHHHHHHHHHhCCC--CCC-CEEEEeCCcHHHHHHHHHHHHHHhCC-CeEEEECCccCCccHHHHHhhCCCCccccCCC
Confidence 344777777765431 121 46677666677777666543 344 45777799998876554433121
Q ss_pred ------EEEEEeccCCCCcccC--HHHHHHHHHHHHHhCCCeeEEEEeC-CCCCcccCCCHHHHHHHHHHHHhcCeEEEe
Q 011801 159 ------QIVPVHCDISNNFKIT--REALEAAYERAQEASINIKGLIITN-PSNPLGTTLDRDTLKSLVSFINDKNIHLVC 229 (477)
Q Consensus 159 ------~~~~v~~~~~~~f~i~--~~~l~~~~~~~~~~~~~~k~vii~n-P~NPtG~~~~~~~l~~l~~~~~~~~~~lI~ 229 (477)
..+++|.+. ++...+ ++.|++.+++. ..+.++.+|++.- .+++.+...+.+.+++|+++|+++|+++|+
T Consensus 161 ~~~~~~~~~~~p~~~-~~~~~~~~~~~l~~~l~~~-~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~ 238 (425)
T PRK08088 161 LMPGHVYRALYPCPL-HGVSEDDAIASIERIFKND-AAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIA 238 (425)
T ss_pred CCCCCcEEcCCCccc-cCccHHHHHHHHHHHHHhc-cCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 111122211 111111 44566666421 1123566655542 267877888999999999999999999999
Q ss_pred cccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHh--cccCCCchHHHHH
Q 011801 230 DEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKM--SSFGLVSSQTQYL 307 (477)
Q Consensus 230 De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~--~~~~~vs~~~q~~ 307 (477)
||+|.++.+.+. +.+... .+.+..+.||||.++ +|+|+||++++++ +.+.+... ......++++|.+
T Consensus 239 Dev~~g~g~~g~-~~~~~~--------~~~~pdi~s~sK~l~-~G~rig~v~~~~~-~~~~~~~~~~~~t~~~~~~~~~a 307 (425)
T PRK08088 239 DEVQTGAGRTGT-LFAMEQ--------MGVAADLTTFAKSIA-GGFPLAGVTGRAE-VMDAIAPGGLGGTYAGNPIACAA 307 (425)
T ss_pred eccccCCCcCcc-hhHHhh--------cCCCCCEEEEecccc-CCCcceeeEecHH-HHhhcCCCCCCCCCCcCHHHHHH
Confidence 999997544332 222111 122334789999998 9999999999655 44433222 1222367899999
Q ss_pred HHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCC-eEecCCceEEEEeeccchhhc--cCchHHHHHHHHHHHhcC
Q 011801 308 LASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGI-NCLKSNAGLFFWMDLRHLLKE--KTLEGEIALWRTIVNDVK 384 (477)
Q Consensus 308 ~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi-~~~~~~~g~~~~~~l~~~~~~--~~~~~e~~l~~~ll~~~g 384 (477)
+..+|+.... ++++++.++..+.+++.+.+.+.+.+. ..... .|+++|+.+...... .......+++..+++ .|
T Consensus 308 ~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g-~G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~-~G 384 (425)
T PRK08088 308 ALAVLKVFEQ-ENLLQKANALGEKLKDGLLAIAEKHPEIGDVRG-LGAMIAIELFEDGDHSKPNAKLTAQIVARARD-KG 384 (425)
T ss_pred HHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEec-cceEEEEEEecCCCCCCCCHHHHHHHHHHHHh-CC
Confidence 9999986543 455555555544444444444444443 22222 289999999532211 011123356666665 59
Q ss_pred eEEeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHhh
Q 011801 385 LNVSPGSSFQCTEPGWFRVCFAN-MDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 385 I~v~pg~~f~~~~~~~~Rl~~~~-~~~e~l~~~l~~l~~~~~~ 426 (477)
|.+.|+..| ++.+|++++. .+++++++++++|++++.+
T Consensus 385 v~~~~~~~~----~~~iRl~~~~~~t~~ei~~~i~~l~~~l~~ 423 (425)
T PRK08088 385 LILLSCGPY----YNVLRILVPLTIEDAQIRQGLEIIAQCFDE 423 (425)
T ss_pred CEEecCCCC----CCEEEEECCCCcCHHHHHHHHHHHHHHHHh
Confidence 998876544 4689999985 5899999999999999875
No 183
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.90 E-value=3.4e-21 Score=196.54 Aligned_cols=217 Identities=17% Similarity=0.261 Sum_probs=152.3
Q ss_pred ccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHH----hh
Q 011801 79 IAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDL----SW 154 (477)
Q Consensus 79 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~----~~ 154 (477)
..+|+++ -..+|++++|++.+ . +..+++++++.|+..++.+++++||.|+++.|.|+++...+ ..
T Consensus 59 y~r~~~p-~~~~Le~~lA~l~G--------~--~~~~~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~ 127 (398)
T PRK07504 59 YSRYSNP-TVDMFEKRMCALEG--------A--EDARATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPR 127 (398)
T ss_pred eecCCCc-hHHHHHHHHHHHhC--------C--CeeeEecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhh
Confidence 3456544 36899999999986 2 23345677788998888888899999999999999764432 33
Q ss_pred hCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEeccccc
Q 011801 155 RTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYA 234 (477)
Q Consensus 155 ~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~ 234 (477)
. |+++..++ .+|++++++++++ ++|+|++++|+||||.+++ +++|.++|+++|+++|+|++|+
T Consensus 128 ~-G~~v~~vd-------~~d~e~l~~ai~~------~tklV~lesp~NptG~v~d---l~~I~~la~~~gi~lvvD~a~a 190 (398)
T PRK07504 128 Y-GIESTLVD-------GLDLDNWEKAVRP------NTKVFFLESPTNPTLEVID---IAAVAKIANQAGAKLVVDNVFA 190 (398)
T ss_pred c-CeEEEEEC-------CCCHHHHHHhcCc------CceEEEEECCCCCCcEecC---HHHHHHHHHHcCCEEEEECCcc
Confidence 4 88888775 2578999888754 7899999999999999999 7788888999999999999998
Q ss_pred ccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEE-EEEeCCHHHHHHHHH-hcccC-CCchHHHHHHHHh
Q 011801 235 ATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVG-IVYSFNDTVVNCGRK-MSSFG-LVSSQTQYLLASM 311 (477)
Q Consensus 235 ~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG-~i~~~~~~i~~~~~~-~~~~~-~vs~~~q~~~~~~ 311 (477)
...+.. +. + .+..+++.|+||.++.+|.|+| +++++++.+.+.++. +...+ .+++..++++..-
T Consensus 191 ~~~~~~----~~-~--------~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~~~~g~~~s~~~A~~~l~~ 257 (398)
T PRK07504 191 TPLFQK----PL-E--------LGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFRHTGPSLSPFNAWTLLKG 257 (398)
T ss_pred ccccCC----ch-h--------hCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhc
Confidence 533321 11 1 1345789999999988999996 555655544433332 22222 3455555555555
Q ss_pred cCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 011801 312 LSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV 343 (477)
Q Consensus 312 L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~ 343 (477)
|.. +..+.++..++...+.+.|+++
T Consensus 258 L~t-------l~~R~~~~~~na~~la~~L~~~ 282 (398)
T PRK07504 258 LET-------LPVRVRQQTESAAAIADFLAGH 282 (398)
T ss_pred cch-------HHHHHHHHHHHHHHHHHHHHcC
Confidence 544 2233334446666677777765
No 184
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.90 E-value=9.8e-21 Score=191.67 Aligned_cols=218 Identities=15% Similarity=0.140 Sum_probs=160.1
Q ss_pred ccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHH---hhh
Q 011801 79 IAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDL---SWR 155 (477)
Q Consensus 79 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~---~~~ 155 (477)
..+|+.+ ....|++++|++.+ .+++++++|+++|+.+++.+++++||.|+++.|+|++....+ ...
T Consensus 47 Y~R~~np-t~~~Le~~lA~leg----------~e~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~ 115 (388)
T PRK08861 47 YTRSGNP-NRGLLEQTLSELES----------GKGAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANK 115 (388)
T ss_pred ccCCCCc-hHHHHHHHHHHHhC----------CCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhc
Confidence 4455554 46899999999986 479999999999999999999999999999999998644332 112
Q ss_pred CCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccc
Q 011801 156 TGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAA 235 (477)
Q Consensus 156 ~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~ 235 (477)
.|+++..++. .|++++++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|..
T Consensus 116 ~gi~v~~vd~-------~d~e~l~~~i~~------~tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~vIvDea~~~ 179 (388)
T PRK08861 116 GDFKVQFVDQ-------SDAAALDAALAK------KPKLILLETPSNPLVRVVD---IAELCQKAKAVGALVAVDNTFLT 179 (388)
T ss_pred CCeEEEEECC-------CCHHHHHHhcCc------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCccc
Confidence 2677777652 378888887754 7899999999999999999 67788888899999999999985
Q ss_pred cccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCC-CCceEEEEEeCCHHHHHHHHHhccc--CCCchHHHHHHHHhc
Q 011801 236 TVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGL-PGFRVGIVYSFNDTVVNCGRKMSSF--GLVSSQTQYLLASML 312 (477)
Q Consensus 236 ~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~-~G~RvG~i~~~~~~i~~~~~~~~~~--~~vs~~~q~~~~~~L 312 (477)
.++..+ . ..+..++++|++|.++- .+...|++++.++.+.+.++..... ..+++...+++..-|
T Consensus 180 ~~~~~p--l-----------~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl 246 (388)
T PRK08861 180 PVLQKP--L-----------ELGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWGNCIGATGTPFDSYMTLRGI 246 (388)
T ss_pred cccCCC--c-----------ccCCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHHHhccCCCCChHHHHHHHhcC
Confidence 433221 1 11334789999999864 3478899988666665544433322 335777777777777
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 011801 313 SDDEFVDNFLVETSKRLAKRHHNFTKGLEQV 343 (477)
Q Consensus 313 ~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~ 343 (477)
+.-. -+.++..+....+.+.|+++
T Consensus 247 ~Tl~-------lR~~~~~~~a~~~a~~L~~~ 270 (388)
T PRK08861 247 RTLG-------ARMRVHEESAQQILAYLQTQ 270 (388)
T ss_pred CCHH-------HHHHHHHHHHHHHHHHHHhC
Confidence 7643 23344455666777778765
No 185
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.89 E-value=6.8e-21 Score=192.40 Aligned_cols=280 Identities=16% Similarity=0.162 Sum_probs=185.5
Q ss_pred ccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHH----hh
Q 011801 79 IAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDL----SW 154 (477)
Q Consensus 79 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~----~~ 154 (477)
..+|+++ ...+|++++|++.+ .+ .++++++++|+..++.+++++||+|+++.|.|.++...+ +.
T Consensus 45 y~ry~~p-~~~~Le~~lA~l~~----------~~-~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~ 112 (366)
T PRK07582 45 YGRASNP-TWRALEAALGELEG----------AE-ALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAP 112 (366)
T ss_pred eECCCCc-cHHHHHHHHHHHcC----------CC-EEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhc
Confidence 4567654 67999999999862 34 455555568999999999999999999999998876543 23
Q ss_pred hCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEeccccc
Q 011801 155 RTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYA 234 (477)
Q Consensus 155 ~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~ 234 (477)
. |++++.++.+.. + + . +. .++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|+
T Consensus 113 ~-G~~v~~v~~~~~--~----~---~-~~------~~t~lV~le~p~NPtg~v~d---i~~I~~~a~~~g~~lvVD~t~~ 172 (366)
T PRK07582 113 L-GVTVREAPTAGM--A----E---A-AL------AGADLVLAETPSNPGLDVCD---LAALAAAAHAAGALLVVDNTTA 172 (366)
T ss_pred C-eEEEEEECCCCh--H----H---H-hc------cCceEEEEECCCCCCCCccC---HHHHHHHHHHcCCEEEEECCCC
Confidence 4 899988886421 1 1 1 11 27889999999999998887 8889999999999999999996
Q ss_pred ccccCCCCcccHHHhhhhccCCCCcEEEEecCCccc-CCCCceEEEEEeCCHHHHHHHHHhccc--CCCchHHHHHHHHh
Q 011801 235 ATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDM-GLPGFRVGIVYSFNDTVVNCGRKMSSF--GLVSSQTQYLLASM 311 (477)
Q Consensus 235 ~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~-g~~G~RvG~i~~~~~~i~~~~~~~~~~--~~vs~~~q~~~~~~ 311 (477)
.. +... ++ +. +..++++|+||.+ |.+|+|+||+++.++.+.+.++....+ ...+++..+.+...
T Consensus 173 ~~-~~~~---p~-~~--------g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~a~l~~r~ 239 (366)
T PRK07582 173 TP-LGQR---PL-EL--------GADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERWRLLAGAIPGPFEAWLAHRS 239 (366)
T ss_pred Cc-cccC---ch-hc--------CCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhc
Confidence 32 2111 11 11 2237889999998 456799999998766666655543322 23566777777777
Q ss_pred cCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCe-Ee----c--C-----------CceEEEEeeccchhhccCchHH
Q 011801 312 LSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GIN-CL----K--S-----------NAGLFFWMDLRHLLKEKTLEGE 372 (477)
Q Consensus 312 L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~-~~----~--~-----------~~g~~~~~~l~~~~~~~~~~~e 372 (477)
|...+ .+.++..++...+.+.|+++ .+. +. + + .+| .+.+++.. .
T Consensus 240 l~tl~-------~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg-~~s~~~~~---~------ 302 (366)
T PRK07582 240 LGTLG-------LRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGG-LVSFELAD---A------ 302 (366)
T ss_pred cccHH-------HHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcc-eEEEEeCC---H------
Confidence 76533 22344456667777778765 332 22 1 1 234 45566642 1
Q ss_pred HHHHHHHHHhcCeEEeCCCCCCC--------------CCCCEEEEEeccCCHHHHHHHHHHHHHHHh
Q 011801 373 IALWRTIVNDVKLNVSPGSSFQC--------------TEPGWFRVCFANMDDDTLQVALNRIAAFVQ 425 (477)
Q Consensus 373 ~~l~~~ll~~~gI~v~pg~~f~~--------------~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~ 425 (477)
+...+.++..++.. .+.+++. ..++.+|+|++. |+.+.+++.|.++++
T Consensus 303 -~~~~~~~~~l~~~~-~~~s~G~~~sl~~~~~~~~~~~~~~liR~svGl---E~~~dli~dl~~al~ 364 (366)
T PRK07582 303 -AAAERFVAASRLVV-AATSFGGVHTSADRRARWGDAVPEGFVRLSCGI---EDTDDLVADLERALD 364 (366)
T ss_pred -HHHHHHHHhCCcce-ecccCCCccchhhhHHHcCCCCCCCeEEEEecc---CCHHHHHHHHHHHHh
Confidence 12345566666644 2333332 124689999996 345566777766664
No 186
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.89 E-value=5e-21 Score=194.55 Aligned_cols=290 Identities=14% Similarity=0.128 Sum_probs=196.2
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCC-cEEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCccchHHHHhhhCCcEEE---
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPD-RIVMGGGATGANELIMFCLA--NPGDAFLVPSPYYAAFDRDLSWRTGVQIV--- 161 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~-~i~~t~G~t~al~~i~~~l~--~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~--- 161 (477)
..++++++|+.+.. .++ .+++++++++|++.++.... ..++.|++.+..|++........+|.+..
T Consensus 68 ~~~~~~~la~~l~~--------~~~~~~~~~~SGseA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~ 139 (375)
T PRK04260 68 LNSLQEEVAQKLIG--------DKDYLAFFCNSGAEANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDG 139 (375)
T ss_pred CCHHHHHHHHHHhc--------CcCCEEEEcCccHHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCC
Confidence 46888999987752 133 46889999999998887652 34678999999888643222111122111
Q ss_pred ------EEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCC-CHHHHHHHHHHHHhcCeEEEeccccc
Q 011801 162 ------PVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTL-DRDTLKSLVSFINDKNIHLVCDEIYA 234 (477)
Q Consensus 162 ------~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~-~~~~l~~l~~~~~~~~~~lI~De~y~ 234 (477)
.++.. .+ .|++.+++.+.+ ++.+|++..++|++|... +.+.++++.++|+++|+++|+||+|.
T Consensus 140 ~~~~~~~~~~~---~~-~dl~~l~~~l~~------~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~ 209 (375)
T PRK04260 140 FGDGVPHFSYA---IF-NDLNSVKALVNK------NTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQT 209 (375)
T ss_pred CCCCCCCeEEe---CC-CCHHHHHHhcCC------CeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh
Confidence 11110 01 278888877642 678889999999999875 46779999999999999999999998
Q ss_pred ccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHh--cccCCCchHHHHHHHHhc
Q 011801 235 ATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKM--SSFGLVSSQTQYLLASML 312 (477)
Q Consensus 235 ~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~--~~~~~vs~~~q~~~~~~L 312 (477)
++...+.. .+.. .. +..++ +.||||.+| +|+|+||++++++ +.+.+... ......+++++.++.++|
T Consensus 210 g~g~~g~~-~~~~-~~---~~~pd----i~t~sK~l~-~G~~ig~~~~~~~-~~~~~~~~~~~~t~~~~~~~~~aa~a~l 278 (375)
T PRK04260 210 GMGRTGKL-YAFE-HY---GIEPD----IFTLAKGLA-NGVPVGAMLAKSS-LGGAFGYGSHGSTFGGNKLSMAAASATL 278 (375)
T ss_pred CCCcccch-hhhH-hh---CCCCC----EEEeccccc-CCcceEEEEEcHH-HHhhcCCCCCCCCCCcCHHHHHHHHHHH
Confidence 75333322 1211 11 11334 338999998 8999999999755 43433321 122235788899988888
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHhhCC-CeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCC
Q 011801 313 SDDEFVDNFLVETSKRLAKRHHNFTKGLEQVG-INCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGS 391 (477)
Q Consensus 313 ~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~g-i~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~ 391 (477)
+..+. ++++++.++..+..++.+.+.+.+.+ +.... ..|+++|++++.. ..++.+.+. +.||.+.|+
T Consensus 279 ~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~g~~~~~~~~~~--------~~~~~~~l~-~~Gi~v~~~- 346 (375)
T PRK04260 279 DIMLT-AGFLEQALENGNYLQEQLQKALQDKETVTTVR-GLGYMIGIETTAD--------LSQLVEAAR-DKGLIVLTA- 346 (375)
T ss_pred HHHHh-hHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEe-ccceEEEEEecCc--------HHHHHHHHH-hCCCEEecC-
Confidence 66443 45566667777777777877777664 33333 3689999998521 114555555 469999875
Q ss_pred CCCCCCCCEEEEEe-ccCCHHHHHHHHHHHHHH
Q 011801 392 SFQCTEPGWFRVCF-ANMDDDTLQVALNRIAAF 423 (477)
Q Consensus 392 ~f~~~~~~~~Rl~~-~~~~~e~l~~~l~~l~~~ 423 (477)
+++.+|+++ ..++++++++++++|+++
T Consensus 347 -----~~~~lR~~~~~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 347 -----GTNVIRLLPPLTLTKEEIEQGIAILSEV 374 (375)
T ss_pred -----CCCEEEEcCCCccCHHHHHHHHHHHHHh
Confidence 246799999 546999999999999875
No 187
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.89 E-value=1.2e-20 Score=191.90 Aligned_cols=212 Identities=19% Similarity=0.233 Sum_probs=150.2
Q ss_pred CCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhh---hCCcEEEE
Q 011801 86 HGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSW---RTGVQIVP 162 (477)
Q Consensus 86 ~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~---~~g~~~~~ 162 (477)
....+|++++|++.+. ...+ +++++++|+.+++.+++++||.|+++.|+|++....+.. ..|+++..
T Consensus 61 p~~~~Le~~lA~~~g~---------~~~i-~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~ 130 (388)
T PRK07811 61 PTRTALEEQLAALEGG---------AYGR-AFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTP 130 (388)
T ss_pred ccHHHHHHHHHHHhCC---------CceE-EeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEE
Confidence 4678999999999872 1234 445668999999999999999999999999865443322 12777766
Q ss_pred EeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCC
Q 011801 163 VHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPK 242 (477)
Q Consensus 163 v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~ 242 (477)
++. .|++++++++.+ ++|+|++++|+||||.+.+ +++|+++|+++|+++|+|++|+...+. .
T Consensus 131 ~d~-------~d~e~l~~~i~~------~tklV~ie~p~NPtg~~~d---l~~I~~la~~~gi~lIvD~a~a~~~~~-~- 192 (388)
T PRK07811 131 VDL-------SDLDAVRAAITP------RTKLIWVETPTNPLLSITD---IAALAELAHDAGAKVVVDNTFASPYLQ-Q- 192 (388)
T ss_pred eCC-------CCHHHHHHhcCc------CCeEEEEECCCCCcceecC---HHHHHHHHHHcCCEEEEECCCCccccC-C-
Confidence 653 378889888754 7899999999999999877 888889999999999999999753221 1
Q ss_pred cccHHHhhhhccCCCCcEEEEecCCcccCCCC-ceEEEEEeCCHHHHHHHHHhccc-C-CCchHHHHHHHHhcCChhhHH
Q 011801 243 FTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPG-FRVGIVYSFNDTVVNCGRKMSSF-G-LVSSQTQYLLASMLSDDEFVD 319 (477)
Q Consensus 243 ~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G-~RvG~i~~~~~~i~~~~~~~~~~-~-~vs~~~q~~~~~~L~~~~~~~ 319 (477)
++. .+..++++|++|.++-+| .+.||++++++.+.+.++.+... + ..++...+++...|+.
T Consensus 193 --p~~---------~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~L~t----- 256 (388)
T PRK07811 193 --PLA---------LGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNGAGAVPGPFDAYLTLRGLKT----- 256 (388)
T ss_pred --chh---------hCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCc-----
Confidence 111 123478999999998654 57899998777776655544333 2 2344544555555544
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhC
Q 011801 320 NFLVETSKRLAKRHHNFTKGLEQV 343 (477)
Q Consensus 320 ~~~~~~~~~l~~r~~~l~~~L~~~ 343 (477)
+..+.++..++...+.+.|+++
T Consensus 257 --l~~R~~~~~~na~~la~~L~~~ 278 (388)
T PRK07811 257 --LAVRMDRHSENAEAVAEFLAGH 278 (388)
T ss_pred --HHHHHHHHHHHHHHHHHHHHhC
Confidence 2233344456667777777765
No 188
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.89 E-value=1.1e-20 Score=191.61 Aligned_cols=294 Identities=18% Similarity=0.206 Sum_probs=208.8
Q ss_pred cHHHHHHHHHHHhcccCCCCccC-CCcEEEeCChHHHHHHHHHHh---cCCCCeEEEcCCCccchH----HHHhhhCCcE
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFD-PDRIVMGGGATGANELIMFCL---ANPGDAFLVPSPYYAAFD----RDLSWRTGVQ 159 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~-~~~i~~t~G~t~al~~i~~~l---~~~Gd~vlv~~P~y~~~~----~~~~~~~g~~ 159 (477)
+.+.|+++|+|++ .+ .++|++|.|+|+++++++.++ ..+||.|++..--|+... ...+. .|++
T Consensus 68 ~e~aRe~va~~~~--------a~~~~eIvft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~-~Ga~ 138 (405)
T COG0520 68 YEAAREAVARFLN--------ADSSDEIVFTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKR-TGAK 138 (405)
T ss_pred HHHHHHHHHHHhC--------CCCCCeEEEeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHh-cCcE
Confidence 5789999999987 56 489999999999999999998 589999999998877543 33333 4999
Q ss_pred EEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccC
Q 011801 160 IVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFS 239 (477)
Q Consensus 160 ~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~ 239 (477)
+..+|+++ +..++.++++..+.+ ++|+|.++.-+|.||++.+ +++|+++|+++|+++++|.+++. .
T Consensus 139 v~~i~~~~--~g~~~~~~~~~~i~~------~Tklvais~vSn~tG~~~p---v~~I~~la~~~ga~v~VDaaq~~---~ 204 (405)
T COG0520 139 VRVIPLDD--DGLLDLDALEKLITP------KTKLVALSHVSNVTGTVNP---VKEIAELAHEHGALVLVDAAQAA---G 204 (405)
T ss_pred EEEEecCC--CCCcCHHHHHHhcCC------CceEEEEECccccccccch---HHHHHHHHHHcCCEEEEECcccc---C
Confidence 99999873 457889999987654 8999999999999999999 99999999999999999999873 1
Q ss_pred CCCcccHHHhhhhccCCCCcEEEEecCCc-ccCCCCceEEEEEeCCHHHHHHHHHhcc----------------------
Q 011801 240 SPKFTSVAEVIQEMDCNRDLIHIIYSLSK-DMGLPGFRVGIVYSFNDTVVNCGRKMSS---------------------- 296 (477)
Q Consensus 240 ~~~~~s~~~~~~~~~~~~~~viiv~SlSK-~~g~~G~RvG~i~~~~~~i~~~~~~~~~---------------------- 296 (477)
...+.+.+ .+..+++.|.+| .+| | -.+|.+++.++.+....-....
T Consensus 205 -h~~idv~~--------l~~Df~afsgHKwl~g-P-~GiGvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rf 273 (405)
T COG0520 205 -HLPIDVQE--------LGCDFLAFSGHKWLLG-P-TGIGVLYVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRF 273 (405)
T ss_pred -ccCCCchh--------cCCCEEEEcccccccC-C-CceEEEEEchHHHhhcCCcccCCCceeeecccccccccCcchhh
Confidence 11233332 355688999999 555 4 2499999977655443110000
Q ss_pred -cCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEecCC---ceEEEEeeccchhhccCchH
Q 011801 297 -FGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLKSN---AGLFFWMDLRHLLKEKTLEG 371 (477)
Q Consensus 297 -~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~~~---~g~~~~~~l~~~~~~~~~~~ 371 (477)
.++.+......+.+.+.--. +--+++..++.++..+++.+.|.++ +++++.+. .+-.+.+.++....
T Consensus 274 e~gTpn~~~~i~l~aAl~~~~--~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~~~~------ 345 (405)
T COG0520 274 EAGTPNIAGAIGLAAALDYLL--EIGMEAIEAHERELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKGIHP------ 345 (405)
T ss_pred ccCCchHHHHHhHHHHHHHHH--HHhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeCCCCH------
Confidence 01122222222233332111 1113556667777778888999887 68887653 23455566664311
Q ss_pred HHHHHHHHHHhcCeEEeCCCCCCCC------CCCEEEEEeccC-CHHHHHHHHHHHHHHHh
Q 011801 372 EIALWRTIVNDVKLNVSPGSSFQCT------EPGWFRVCFANM-DDDTLQVALNRIAAFVQ 425 (477)
Q Consensus 372 e~~l~~~ll~~~gI~v~pg~~f~~~------~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~ 425 (477)
.++ ...|.+.||.++.|..|... .++.+|+|++.. |+||++.+++.|+++.+
T Consensus 346 -~dv-~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 346 -HDV-ATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred -HHH-HHHHHhCCeEEEeccccccHHHHhcCCCCceEEEEeecCCHHHHHHHHHHHHHHhh
Confidence 133 44556679999999877531 234599999876 89999999999998764
No 189
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.89 E-value=1.8e-20 Score=191.21 Aligned_cols=216 Identities=17% Similarity=0.166 Sum_probs=153.8
Q ss_pred cccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccc----hHHHHhhh
Q 011801 80 AIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAA----FDRDLSWR 155 (477)
Q Consensus 80 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~----~~~~~~~~ 155 (477)
.+|+++ ...+|++.+|++.+ .++.++ ++++++|+.+++..++++||.|+++.|.|++ +...+...
T Consensus 55 ~R~~~p-~~~~Le~~lA~l~g---------~~~~v~-~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~ 123 (405)
T PRK08776 55 TRSGNP-TRDLLGEALAELEG---------GAGGVI-TATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKG 123 (405)
T ss_pred cCCCCh-HHHHHHHHHHHHhC---------CCceEE-EcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhc
Confidence 344443 25688888888875 134555 4555799999999999999999999999987 33334434
Q ss_pred CCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccc
Q 011801 156 TGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAA 235 (477)
Q Consensus 156 ~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~ 235 (477)
|++++.++. .|++++++++++ ++|+|++++|+||||.+.+ +++|+++|+++|++||+|++|+.
T Consensus 124 -g~~v~~v~~-------~d~~~l~~~i~~------~tklV~l~~P~NPtG~v~d---l~~I~~la~~~gi~vIvD~a~a~ 186 (405)
T PRK08776 124 -HFALITADL-------TDPRSLADALAQ------SPKLVLIETPSNPLLRITD---LRFVIEAAHKVGALTVVDNTFLS 186 (405)
T ss_pred -CcEEEEECC-------CCHHHHHHhcCc------CCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCCcc
Confidence 888887764 267888887753 7899999999999999977 88899999999999999999974
Q ss_pred cccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCC-CceEEEEEeCCHHHHHHHHHhcc--cCCCchHHHHHHHHhc
Q 011801 236 TVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLP-GFRVGIVYSFNDTVVNCGRKMSS--FGLVSSQTQYLLASML 312 (477)
Q Consensus 236 ~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~-G~RvG~i~~~~~~i~~~~~~~~~--~~~vs~~~q~~~~~~L 312 (477)
... +.++ .. +..+++.|++|.++-+ ++..|++++.++.+.+.+..... ...++++.++++...+
T Consensus 187 ~~~----~~pl-~~--------gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~~~g~~~s~~~a~l~~~gl 253 (405)
T PRK08776 187 PAL----QKPL-EF--------GADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWANALGLTGSPFDAFLTLRGL 253 (405)
T ss_pred ccc----CCcc-cc--------cCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhhh
Confidence 211 1121 11 2237889999999755 57889998877766554433221 1235677777666544
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 011801 313 SDDEFVDNFLVETSKRLAKRHHNFTKGLEQV 343 (477)
Q Consensus 313 ~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~ 343 (477)
+. +..+.++..++...+.+.|+++
T Consensus 254 ~t-------l~~r~~~~~~na~~la~~L~~~ 277 (405)
T PRK08776 254 RT-------LDARLRVHQENADAIAALLDGH 277 (405)
T ss_pred Cc-------HHHHHHHHHHHHHHHHHHHHcC
Confidence 43 4455666677778888888765
No 190
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.89 E-value=2.9e-21 Score=197.10 Aligned_cols=217 Identities=15% Similarity=0.193 Sum_probs=157.4
Q ss_pred ccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccc----hHHHHhh
Q 011801 79 IAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAA----FDRDLSW 154 (477)
Q Consensus 79 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~----~~~~~~~ 154 (477)
..+|+.+ ...+|++++|++.+ .++.+++++++.|+..++.+++.+||.|+++...|++ +...++.
T Consensus 64 Y~r~~~p-~~~~le~~lA~l~g----------~~~al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~ 132 (403)
T PRK07810 64 YSRYGNP-TVSMFEERLRLIEG----------AEACFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPR 132 (403)
T ss_pred eeCCCCc-hHHHHHHHHHHHhC----------CCcEEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHH
Confidence 3456654 36899999999986 3467788888899999998999999999998855543 3444555
Q ss_pred hCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEeccccc
Q 011801 155 RTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYA 234 (477)
Q Consensus 155 ~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~ 234 (477)
. |++++.++. .|++++++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|+
T Consensus 133 ~-G~~v~~vd~-------~d~~~l~~ai~~------~tklV~~esp~Nptg~v~d---l~~I~~la~~~g~~vivD~a~a 195 (403)
T PRK07810 133 W-GVETVFVDG-------EDLSQWEEALSV------PTQAVFFETPSNPMQSLVD---IAAVSELAHAAGAKVVLDNVFA 195 (403)
T ss_pred c-CcEEEEECC-------CCHHHHHHhcCc------CceEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCC
Confidence 5 999888863 278889988864 7899999999999999998 8888889999999999999997
Q ss_pred ccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceE-EEEEeCCHHHHHHHHHh-ccc-CCCchHHHHHHHHh
Q 011801 235 ATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRV-GIVYSFNDTVVNCGRKM-SSF-GLVSSQTQYLLASM 311 (477)
Q Consensus 235 ~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~Rv-G~i~~~~~~i~~~~~~~-~~~-~~vs~~~q~~~~~~ 311 (477)
...+.. +. ..+..+++.|++|.++..|.++ |+|+++++.+...++.+ ... ..+++..++++...
T Consensus 196 ~~~~~~----~~---------~~gaDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~~~~g~~~s~~~a~l~l~~ 262 (403)
T PRK07810 196 TPLLQR----GL---------PLGADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPALSAFNAWVLLKG 262 (403)
T ss_pred ccccCC----hh---------hcCCcEEEccCCceecCCcCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHhc
Confidence 432221 11 1134578899999998788887 77887666554434332 222 24677777777777
Q ss_pred cCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 011801 312 LSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV 343 (477)
Q Consensus 312 L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~ 343 (477)
|+.- ..+.++..+....+.+.|+++
T Consensus 263 L~tl-------~~R~~~~~~~a~~~a~~L~~~ 287 (403)
T PRK07810 263 LETL-------ALRVRHSNASALRIAEFLEGH 287 (403)
T ss_pred cCcH-------HHHHHHHHHHHHHHHHHHhcC
Confidence 7653 233334445555666777765
No 191
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.89 E-value=1.4e-20 Score=192.24 Aligned_cols=215 Identities=20% Similarity=0.239 Sum_probs=150.2
Q ss_pred cccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHH----HHhhh
Q 011801 80 AIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDR----DLSWR 155 (477)
Q Consensus 80 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~----~~~~~ 155 (477)
.+|+.+ ...+|++++|++.+ .+..++++++++|+.+++..+++|||.|+++.|.|..... .+...
T Consensus 60 ~r~~~p-~~~~le~~lA~l~g----------~~~~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~ 128 (403)
T PRK07503 60 SRISNP-TLALLEQRMASLEG----------GEAAVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEF 128 (403)
T ss_pred eCCCCc-hHHHHHHHHHHHhC----------CCcEEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhC
Confidence 345443 36899999999986 1235666677889999999999999999999999975432 33444
Q ss_pred CCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccc
Q 011801 156 TGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAA 235 (477)
Q Consensus 156 ~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~ 235 (477)
|+++..++.+ |++++++++++ ++|+|++++|+||||.+.+ +++|.++|+++|+++|+|++|+.
T Consensus 129 -G~~v~~vd~~-------d~~~l~~~i~~------~tklV~le~p~NPtG~~~d---i~~I~~la~~~gi~lIvD~a~a~ 191 (403)
T PRK07503 129 -GVTVRHVDLT-------DPAALKAAISD------KTRMVYFETPANPNMRLVD---IAAVAEIAHGAGAKVVVDNTYCT 191 (403)
T ss_pred -CEEEEEeCCC-------CHHHHHHhcCc------cCcEEEEeCCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcc
Confidence 8888888753 67888888754 7899999999999999998 78888888999999999999985
Q ss_pred cccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCC-ceEEEEEeCCHHHHHHHHHh--cc--cCCCchHHHHHHHH
Q 011801 236 TVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPG-FRVGIVYSFNDTVVNCGRKM--SS--FGLVSSQTQYLLAS 310 (477)
Q Consensus 236 ~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G-~RvG~i~~~~~~i~~~~~~~--~~--~~~vs~~~q~~~~~ 310 (477)
..+ .. ++ .. +..++++|+||.+|.+| .|.|+++.+ +.+.+.++.. .. ...++++.++++..
T Consensus 192 ~~~-~~---~l-~~--------g~Di~v~S~tK~l~g~gd~~gG~v~~~-~~l~~~l~~~~~~~~~g~~~s~~~a~l~l~ 257 (403)
T PRK07503 192 PYL-QR---PL-EL--------GADLVVHSATKYLGGHGDITAGLVVGG-KALADRIRLEGLKDMTGAVMSPFDAFLLMR 257 (403)
T ss_pred ccc-CC---ch-hh--------CCCEEEccccccccCCCceeEEEEEcC-HHHHHHHHhhhHHhCcCCCCCHHHHHHHHc
Confidence 322 21 11 11 23478899999999766 788988864 4454444321 11 12356666666655
Q ss_pred hcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 011801 311 MLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV 343 (477)
Q Consensus 311 ~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~ 343 (477)
-|+.- ..+.++..++...+.+.|+++
T Consensus 258 ~L~tl-------~~r~~~~~~na~~~a~~L~~~ 283 (403)
T PRK07503 258 GLKTL-------ALRMDRHCASAQAVAEWLARH 283 (403)
T ss_pred CcchH-------HHHHHHHHHHHHHHHHHHHhC
Confidence 55432 222233345556666677665
No 192
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.89 E-value=1.7e-20 Score=190.99 Aligned_cols=215 Identities=17% Similarity=0.241 Sum_probs=151.0
Q ss_pred cccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchH----HHHhhh
Q 011801 80 AIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFD----RDLSWR 155 (477)
Q Consensus 80 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~----~~~~~~ 155 (477)
.+|+++ ...+|++++|++.+ .+..++++++++|+.+++.+++.+||.|+++.|.|+... ..+...
T Consensus 54 ~r~~~p-~~~~le~~lA~l~g----------~~~av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~ 122 (391)
T TIGR01328 54 SRLGNP-TVSNLEGRIAFLEG----------TEAAVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKF 122 (391)
T ss_pred eCCCCc-hHHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcC
Confidence 445544 35789999999987 234677888889999999999999999999999887543 333444
Q ss_pred CCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccc
Q 011801 156 TGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAA 235 (477)
Q Consensus 156 ~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~ 235 (477)
|+++..++++ |++++++++.+ ++++|++++|+||+|.+.+ +++|+++|+++|+++|+|++|+.
T Consensus 123 -G~~~~~vd~~-------d~e~l~~~i~~------~tklV~le~p~Np~G~v~d---l~~I~~la~~~gi~livD~a~a~ 185 (391)
T TIGR01328 123 -GIQVDFINMA-------IPEEVKAHIKD------NTKIVYFETPANPTMKLID---MERVCRDAHSQGVKVIVDNTFAT 185 (391)
T ss_pred -CeEEEEECCC-------CHHHHHHhhcc------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCch
Confidence 8888888753 67888888754 7899999999999999998 77888888999999999999974
Q ss_pred cccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceE-EEEEeCCHHHHHHHHHh--c-ccC-CCchHHHHHHHH
Q 011801 236 TVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRV-GIVYSFNDTVVNCGRKM--S-SFG-LVSSQTQYLLAS 310 (477)
Q Consensus 236 ~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~Rv-G~i~~~~~~i~~~~~~~--~-~~~-~vs~~~q~~~~~ 310 (477)
..+. . ++ ..+..++++|+||.+|.+|.++ |++++ ++.+.+.++.. . .++ .+++...+++..
T Consensus 186 ~~~~-~---~~---------~~g~Divv~S~sK~lgg~g~~~gG~v~~-~~~li~~l~~~~~~~~~g~~l~~~~a~l~l~ 251 (391)
T TIGR01328 186 PMLT-N---PV---------ALGVDVVVHSATKYIGGHGDVVAGLICG-KAELLQQIRMVGIKDMTGSVISPFDAWLILR 251 (391)
T ss_pred hccC-C---ch---------hcCCCEEEccccccccCCCCceEEEEEc-CHHHHHHHHHHHHHhCCCCCCCcHHHHHHHh
Confidence 3221 1 11 1133378899999999889875 66666 44444444321 1 122 345555555555
Q ss_pred hcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 011801 311 MLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV 343 (477)
Q Consensus 311 ~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~ 343 (477)
-|+.- ..+.++..++.+.+.+.|+++
T Consensus 252 ~L~tl-------~~r~~~~~~na~~la~~L~~~ 277 (391)
T TIGR01328 252 GLKTL-------NIRMKRHSENAMKVAEYLKSH 277 (391)
T ss_pred CcCcH-------HHHHHHHHHHHHHHHHHHHhC
Confidence 45432 233444556667777777765
No 193
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.89 E-value=1e-20 Score=192.68 Aligned_cols=209 Identities=16% Similarity=0.212 Sum_probs=150.0
Q ss_pred CcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHH----HhhhCCcEEEE
Q 011801 87 GLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRD----LSWRTGVQIVP 162 (477)
Q Consensus 87 G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~----~~~~~g~~~~~ 162 (477)
-..+|++.+|++.+ .+..++++++++|+..++.+++++||.|+++.|+|++.... +... |+++..
T Consensus 65 ~~~~le~~lA~l~g----------~~~~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~-Gi~v~~ 133 (398)
T PRK08249 65 TVQAFEEKVRILEG----------AEAATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRM-GVDVTL 133 (398)
T ss_pred HHHHHHHHHHHHhC----------CCeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhC-CeEEEE
Confidence 46899999999986 24566777778999999999999999999999999875433 3444 888776
Q ss_pred EeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCC
Q 011801 163 VHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPK 242 (477)
Q Consensus 163 v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~ 242 (477)
++. .|++++++++++ ++|+|++++|+||||.+.+ +++|.++|+++|+++|+|++|+..... .
T Consensus 134 vd~-------~d~e~l~~~i~~------~tklV~ie~p~NPtg~v~d---l~~I~~la~~~gi~livD~t~a~~~~~-~- 195 (398)
T PRK08249 134 CET-------GDHEQIEAEIAK------GCDLLYLETPTNPTLKIVD---IERLAAAAKKVGALVVVDNTFATPINQ-N- 195 (398)
T ss_pred cCC-------CCHHHHHHhcCC------CCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCcCccccC-C-
Confidence 652 478899888854 7899999999999999999 777888899999999999999854222 1
Q ss_pred cccHHHhhhhccCCCCcEEEEecCCcccCCCCceE-EEEEeCCHHHHHHHHHhcc-c-CCCchHHHHHHHHhcCChhhHH
Q 011801 243 FTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRV-GIVYSFNDTVVNCGRKMSS-F-GLVSSQTQYLLASMLSDDEFVD 319 (477)
Q Consensus 243 ~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~Rv-G~i~~~~~~i~~~~~~~~~-~-~~vs~~~q~~~~~~L~~~~~~~ 319 (477)
+. .. +..++++|+||.+|-+|.++ |++++ ++.+.+.++.... . ..+++..++++..-|+.
T Consensus 196 --~l-~~--------~~Divv~S~sK~l~g~~~~~gG~vv~-~~~l~~~l~~~~~~~g~~~s~~~a~l~l~~l~t----- 258 (398)
T PRK08249 196 --PL-AL--------GADLVIHSATKFLSGHADALGGVVCG-SKELMEQVYHYREINGATMDPMSAYLILRGMKT----- 258 (398)
T ss_pred --ch-hh--------CCCEEeccCceecCCCCCceEEEEEC-CHHHHHHHHHHHHhcCCCCCHHHHHHHHhCcch-----
Confidence 11 11 22367899999998677776 55555 5555554443322 2 23566666665555543
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhC
Q 011801 320 NFLVETSKRLAKRHHNFTKGLEQV 343 (477)
Q Consensus 320 ~~~~~~~~~l~~r~~~l~~~L~~~ 343 (477)
+..+.++..+..+.+.+.|+++
T Consensus 259 --L~~R~~~~~~na~~la~~L~~~ 280 (398)
T PRK08249 259 --LKLRVRQQQESAMALAKYLQTH 280 (398)
T ss_pred --HHHHHHHHHHHHHHHHHHHHcC
Confidence 2333445556667777888765
No 194
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.89 E-value=1.2e-20 Score=192.20 Aligned_cols=217 Identities=12% Similarity=0.065 Sum_probs=154.6
Q ss_pred ccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHH----HHhh
Q 011801 79 IAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDR----DLSW 154 (477)
Q Consensus 79 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~----~~~~ 154 (477)
..+|+++ ...+|++++|++.+ .+++++++|+++|+.+++.++++|||.|+++.|+|+.+.. .+..
T Consensus 59 Y~r~~~p-t~~~Le~~lA~l~g----------~~~~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~ 127 (394)
T PRK07050 59 YGLHATP-TSLALAQRLAEIEG----------GRHALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARD 127 (394)
T ss_pred cCCCCCH-HHHHHHHHHHHHhC----------CCeEEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHh
Confidence 3455443 36788888888875 4689999999999999999999999999999999998664 3344
Q ss_pred hCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEeccccc
Q 011801 155 RTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYA 234 (477)
Q Consensus 155 ~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~ 234 (477)
. |+++..++.. +.+++++++++ ++|+|++++|+||+|... ++++|+++|+++|+++|+|++|+
T Consensus 128 ~-Gi~v~~vd~~-------~~~~l~~~i~~------~tklV~le~p~Np~~~~~---di~~I~~ia~~~gi~livD~a~a 190 (394)
T PRK07050 128 F-GITVRFYDPL-------IGAGIADLIQP------NTRLIWLEAPGSVTMEVP---DVPAITAAARARGVVTAIDNTYS 190 (394)
T ss_pred c-CeEEEEECCC-------CHHHHHHhcCC------CCeEEEEECCCCCCccHh---hHHHHHHHHHHcCCEEEEECCcc
Confidence 4 8888877632 34667777643 789999999999997554 59999999999999999999997
Q ss_pred ccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccC-CCCceEEEEEeCCHHHHHHHHHhcc--cCCCchHHHHHHHHh
Q 011801 235 ATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMG-LPGFRVGIVYSFNDTVVNCGRKMSS--FGLVSSQTQYLLASM 311 (477)
Q Consensus 235 ~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g-~~G~RvG~i~~~~~~i~~~~~~~~~--~~~vs~~~q~~~~~~ 311 (477)
...+- .+ + ..+..+++.|++|.++ ..+.+.|++++.++.+.+.++.... ...+++...+.+...
T Consensus 191 ~~~~~----~~---l------~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~lr~ 257 (394)
T PRK07050 191 AGLAF----KP---F------EHGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLARMRLGIGVSADDCSLVLRG 257 (394)
T ss_pred ccccc----CH---H------HcCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcC
Confidence 42211 11 1 2244688999999996 3446789998877766665544333 233566666665555
Q ss_pred cCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 011801 312 LSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV 343 (477)
Q Consensus 312 L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~ 343 (477)
|.+- ..+.++..++...+.+.|++.
T Consensus 258 l~tl-------~~Rl~~~~~~a~~la~~L~~~ 282 (394)
T PRK07050 258 LPSL-------QVRLAAHDRSALEVAEWLKAR 282 (394)
T ss_pred CCcH-------HHHHHHHHHHHHHHHHHHHhC
Confidence 5542 223344445555677777765
No 195
>PRK07505 hypothetical protein; Provisional
Probab=99.88 E-value=4.9e-20 Score=188.99 Aligned_cols=292 Identities=13% Similarity=0.113 Sum_probs=175.0
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhc----CCCC-eEEEcCCCccchHH---HHhhhCCcE
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLA----NPGD-AFLVPSPYYAAFDR---DLSWRTGVQ 159 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~----~~Gd-~vlv~~P~y~~~~~---~~~~~~g~~ 159 (477)
..++++.++++++ . +.+++++ +++|++.++..+. .+|+ .|++.+..|++-.. ..... +.+
T Consensus 93 ~~~l~~~la~~~~--------~--~~~~~~s-G~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~-~~~ 160 (402)
T PRK07505 93 LKDLEEALSELFG--------A--SVLTFTS-CSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICAD-ETE 160 (402)
T ss_pred HHHHHHHHHHHhC--------C--CEEEECC-hHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhc-CCe
Confidence 4677777777764 2 4455554 4668877765432 2232 36677766544221 11222 556
Q ss_pred EEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccC
Q 011801 160 IVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFS 239 (477)
Q Consensus 160 ~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~ 239 (477)
++.++. .|++++++++++ +.+++++++|+||||.+++ +++|.++|+++++++|+||+|+...|+
T Consensus 161 v~~~~~-------~d~~~l~~~~~~------~~~~~vl~~p~~~~G~~~~---~~~i~~l~~~~~~~li~DEa~~~~~~g 224 (402)
T PRK07505 161 VETIDH-------NDLDALEDICKT------NKTVAYVADGVYSMGGIAP---VKELLRLQEKYGLFLYIDDAHGLSIYG 224 (402)
T ss_pred EEEeCC-------CCHHHHHHHHhc------CCCEEEEEecccccCCcCC---HHHHHHHHHHcCCEEEEECcccccCcC
Confidence 666664 278888887753 4578999999999999999 677888899999999999999644444
Q ss_pred CCCcccHHHhhhhccC-CCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhcccC----CCchHHHHHHHHhcCC
Q 011801 240 SPKFTSVAEVIQEMDC-NRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSFG----LVSSQTQYLLASMLSD 314 (477)
Q Consensus 240 ~~~~~s~~~~~~~~~~-~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~~~~----~vs~~~q~~~~~~L~~ 314 (477)
........... +. .++++++++||||.+|.+| ||++..++.+.+.+.+....+ .+++++..++.+.++-
T Consensus 225 ~~g~~~~~~~~---~~~~~d~~i~~~s~sK~~~~~G---g~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~ 298 (402)
T PRK07505 225 KNGEGYVRSEL---DYRLNERTIIAASLGKAFGASG---GVIMLGDAEQIELILRYAGPLAFSQSLNVAALGAILASAEI 298 (402)
T ss_pred CCCCchHHHHc---CCCCCCCeEEEEechhhhhccC---eEEEeCCHHHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHH
Confidence 32111111111 11 3577899999999999776 888765666666555432221 2344555555555541
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCC
Q 011801 315 DEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQ 394 (477)
Q Consensus 315 ~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~ 394 (477)
.. ++.+.+..++++++.+.+...+... .....-++.++.++.. ....++.+.++ +.||.++++..+.
T Consensus 299 ~~--~~~~~~~~~~l~~~~~~~~~~~~~~----~~g~~~~i~~~~~~~~------~~~~~~~~~l~-~~Gi~v~~~~~p~ 365 (402)
T PRK07505 299 HL--SEELDQLQQKLQNNIALFDSLIPTE----QSGSFLPIRLIYIGDE------DTAIKAAKQLL-DRGFYTSPVFFPV 365 (402)
T ss_pred Hh--ccCcHHHHHHHHHHHHHHHHHHHhc----CCCCCCCEEEEEeCCH------HHHHHHHHHHH-HCCCeEeeecCCC
Confidence 00 1123334455555554443322211 0112212234433311 11124666666 5599999874332
Q ss_pred C-CCCCEEEEEeccC-CHHHHHHHHHHHHHHHhh
Q 011801 395 C-TEPGWFRVCFANM-DDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 395 ~-~~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~~ 426 (477)
. .++.++||+++.. +++++++++++|++++++
T Consensus 366 ~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 366 VAKGRAGLRIMFRASHTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred CCCCCceEEEecCccCCHHHHHHHHHHHHHHHHh
Confidence 1 1236899999763 999999999999999865
No 196
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.88 E-value=3.9e-20 Score=189.78 Aligned_cols=284 Identities=14% Similarity=0.126 Sum_probs=186.4
Q ss_pred CCcEEEeCChHHHHHHHHHHhc--------CCCCeEEEcCCCccchHHHHhhhCCcEEEE---EeccC--CCCcccCHHH
Q 011801 111 PDRIVMGGGATGANELIMFCLA--------NPGDAFLVPSPYYAAFDRDLSWRTGVQIVP---VHCDI--SNNFKITREA 177 (477)
Q Consensus 111 ~~~i~~t~G~t~al~~i~~~l~--------~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~---v~~~~--~~~f~i~~~~ 177 (477)
.+++++++++++|++.+++... .....|+..+.+|++........++..... .++.. ..-...|+++
T Consensus 96 ~~~v~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 175 (406)
T PRK12381 96 ADRVFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNS 175 (406)
T ss_pred CCeEEEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHH
Confidence 4689999999999999998742 234789999999988764433222321100 00000 0000126788
Q ss_pred HHHHHHHHHHhCCCeeEEEEeCCCCCcccCC--CHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccC
Q 011801 178 LEAAYERAQEASINIKGLIITNPSNPLGTTL--DRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDC 255 (477)
Q Consensus 178 l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~--~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~ 255 (477)
+++.+.+ ++++|++ +|.||+|-+. +.+.+++|.++|++||+++|+||+|.++.+.+..+ .. +.. +.
T Consensus 176 l~~~l~~------~~aavii-EPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~-~~-~~~---~v 243 (406)
T PRK12381 176 ASALIDD------QTCAVIV-EPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELY-AY-MHY---GV 243 (406)
T ss_pred HHHhccC------CeeEEEE-eCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchh-hh-Hhh---CC
Confidence 8877742 6777666 7999998765 78999999999999999999999998765554322 11 111 11
Q ss_pred CCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHh--cccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHH
Q 011801 256 NRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKM--SSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRH 333 (477)
Q Consensus 256 ~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~--~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~ 333 (477)
.++ +.||||.+| +|+|+||++++++ +.+.+... ......+++.+.++.+.|+-- + -.+..++++++.
T Consensus 244 ~pD----i~t~sK~l~-gG~~ig~~~~~~~-~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l---~--~~~~~~~~~~~~ 312 (406)
T PRK12381 244 TPD----VLTTAKALG-GGFPIGAMLTTEK-CASVMTVGTHGTTYGGNPLASAVAGKVLELI---N--TPEMLNGVKQRH 312 (406)
T ss_pred CCC----EEEehhhhh-CCCceEEEEEcHH-HHhhcCCCCCCCCCCCCHHHHHHHHHHHHHH---h--hccHHHHHHHHH
Confidence 233 349999999 9999999999654 44444321 121235778888877766321 1 123456677777
Q ss_pred HHHHHHHhhCC--Ce--EecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEecc-C
Q 011801 334 HNFTKGLEQVG--IN--CLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFAN-M 408 (477)
Q Consensus 334 ~~l~~~L~~~g--i~--~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~-~ 408 (477)
+++.+.|++++ .. ......|+++|+.++.... .....+... +.++||.+.++ +++++|++++. +
T Consensus 313 ~~l~~~L~~l~~~~~~~~~vrg~Gl~~~~~l~~~~~----~~~~~~~~~-l~~~Gv~v~~~------g~~~lRl~p~~~~ 381 (406)
T PRK12381 313 DWFVERLNTINARYGLFSEIRGLGLLIGCVLNAEYA----GKAKQISQE-AAKAGVMVLIA------GPNVVRFAPALNI 381 (406)
T ss_pred HHHHHHHHHHHhhCCCEEEEecCeEEEEEEecCchh----hHHHHHHHH-HHHCCcEEeeC------CCCEEEEeCCccC
Confidence 88888777653 21 1223457899998864210 111234444 45669999764 24689999976 5
Q ss_pred CHHHHHHHHHHHHHHHhhhh
Q 011801 409 DDDTLQVALNRIAAFVQQDK 428 (477)
Q Consensus 409 ~~e~l~~~l~~l~~~~~~~~ 428 (477)
+++++++++++|++++++..
T Consensus 382 t~~~i~~~~~~l~~~l~~~~ 401 (406)
T PRK12381 382 SEEEITTGLDRFARACERFV 401 (406)
T ss_pred CHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999997643
No 197
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.88 E-value=3.7e-21 Score=193.97 Aligned_cols=279 Identities=15% Similarity=0.173 Sum_probs=188.9
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcC----CC-CeEEEcCCCccchHH---HHhhhCCcE
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLAN----PG-DAFLVPSPYYAAFDR---DLSWRTGVQ 159 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~----~G-d~vlv~~P~y~~~~~---~~~~~~g~~ 159 (477)
+.++|+.+|++++ .++++|++|+|+++++..++..+.. +| +.|++....|+.+.. .++.. |++
T Consensus 44 ~~~~r~~la~~~g--------~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~-G~~ 114 (353)
T TIGR03235 44 VERARKQVAEALG--------ADTEEVIFTSGATESNNLAILGLARAGEQKGKKHIITSAIEHPAVLEPIRALERN-GFT 114 (353)
T ss_pred HHHHHHHHHHHhC--------CCCCeEEEeCCHHHHHHHHHHHHHHhcccCCCCeeeEcccccHHHHHHHHHHHhc-CCE
Confidence 4688888888886 5688999999999999999888753 56 778888766665443 34444 999
Q ss_pred EEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccC
Q 011801 160 IVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFS 239 (477)
Q Consensus 160 ~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~ 239 (477)
++.++.+. ++.+|++++++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++++ +.
T Consensus 115 v~~v~~~~--~~~~d~~~l~~~l~~------~~~lv~~~~~~n~tG~~~~---~~~I~~l~~~~~~~~ivD~a~~---~g 180 (353)
T TIGR03235 115 VTYLPVDE--SGRIDVDELADAIRP------DTLLVSIMHVNNETGSIQP---IREIAEVLEAHEAFFHVDAAQV---VG 180 (353)
T ss_pred EEEEccCC--CCcCCHHHHHHhCCC------CCEEEEEEcccCCceeccC---HHHHHHHHHHcCCEEEEEchhh---cC
Confidence 99998763 467899999988753 6889999999999999999 7888999999999999999987 22
Q ss_pred CCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHH-HHHh---------cccCCCchHHHHHHH
Q 011801 240 SPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNC-GRKM---------SSFGLVSSQTQYLLA 309 (477)
Q Consensus 240 ~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~-~~~~---------~~~~~vs~~~q~~~~ 309 (477)
..+ ..+. ..+..+++.|.+|.+|.+| +|+++.+++.+... .... ...++.+.....++.
T Consensus 181 ~~~-~~~~--------~~~~D~~~~s~~K~~gp~g--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~ 249 (353)
T TIGR03235 181 KIT-VDLS--------ADRIDLISCSGHKIYGPKG--IGALVIRKRGKPKAPLKPIMFGGGQERGLRPGTLPVHLIVGMG 249 (353)
T ss_pred Ccc-cccc--------ccCCCEEEeehhhcCCCCc--eEEEEEccCcccccccCceeeCCCCcCccccCCCChHHHHHHH
Confidence 221 1111 2234577789999887556 89998876532111 1100 012233333444444
Q ss_pred HhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCce---EEEEeeccchhhccCchHHHHHHHHHHHhcCeE
Q 011801 310 SMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAG---LFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLN 386 (477)
Q Consensus 310 ~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g---~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~ 386 (477)
..+.. +...+++..++++++.+.+.+.|.+.|+++..+..+ -.+.+.++. .+. +.+...|++ +|.
T Consensus 250 ~al~~---~~~~~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~~~~~~~i~~~~~~~------~~~--~~v~~~L~~-~i~ 317 (353)
T TIGR03235 250 EAAEI---ARRNAQAWEVKLRAMRNQLRDALQTLGVKLNGDPAETIPHILNFSIDG------VNS--EALIVNLRA-DAA 317 (353)
T ss_pred HHHHH---HHhhHHHHHHHHHHHHHHHHHHhccCCeEEeCCcccccCCEEEEEeCC------cCH--HHHHHHHhC-CeE
Confidence 44432 123456677889999999999998889887643221 133333332 111 233444555 999
Q ss_pred EeCCCCCCCCC--CCEEEEEeccCCHHHH
Q 011801 387 VSPGSSFQCTE--PGWFRVCFANMDDDTL 413 (477)
Q Consensus 387 v~pg~~f~~~~--~~~~Rl~~~~~~~e~l 413 (477)
|++|..|.+.. +.++|.+++. +++++
T Consensus 318 v~~g~~~~~~~~~~~~~l~~~g~-~~~~~ 345 (353)
T TIGR03235 318 VSTGSACSSSKYEPSHVLQAMGL-DTDRA 345 (353)
T ss_pred EEchhhcCCCCCCCCHHHHHcCC-CHHHh
Confidence 99999987543 3467777764 54444
No 198
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.88 E-value=9.8e-20 Score=181.52 Aligned_cols=297 Identities=16% Similarity=0.155 Sum_probs=206.7
Q ss_pred CcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEecc
Q 011801 87 GLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCD 166 (477)
Q Consensus 87 G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~ 166 (477)
-+.+|.+.+|+|++ .+..++.+++-.|+..++.+|++++|.|+...-.+......++.. +.+++.+.-
T Consensus 85 ~h~~LE~~lA~f~g----------~e~al~f~SGy~AN~~~i~~l~~~~dli~~D~lnHASiidG~rls-~a~~~~f~H- 152 (388)
T COG0156 85 LHVELEEELADFLG----------AEAALLFSSGFVANLGLLSALLKKGDLIFSDELNHASIIDGIRLS-RAEVRRFKH- 152 (388)
T ss_pred HHHHHHHHHHHHhC----------CCcEEEEcccchhHHHHHHHhcCCCcEEEEechhhhhHHHHHHhC-CCcEEEecC-
Confidence 35899999999997 345555555567999999999999999999999999888888876 999888773
Q ss_pred CCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccH
Q 011801 167 ISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSV 246 (477)
Q Consensus 167 ~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~ 246 (477)
.|++.||+.+++.+..+.+.+.|++..--.-.|.+.+ |++|++++++|+.++++||+|+-.+++... ..+
T Consensus 153 ------nD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiAp---L~~l~~L~~ky~a~L~VDEAHa~Gv~G~~G-rG~ 222 (388)
T COG0156 153 ------NDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAP---LPELVELAEKYGALLYVDEAHAVGVLGPNG-RGL 222 (388)
T ss_pred ------CCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCC---HHHHHHHHHHhCcEEEEEccccccccCCCC-ccH
Confidence 3789999999886533323455555555678999999 888999999999999999999976666433 343
Q ss_pred HHhhhhccCC-CCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhcccCC---CchHHHHHHHHhcCChhhHHHHH
Q 011801 247 AEVIQEMDCN-RDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGL---VSSQTQYLLASMLSDDEFVDNFL 322 (477)
Q Consensus 247 ~~~~~~~~~~-~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~~~~~---vs~~~q~~~~~~L~~~~~~~~~~ 322 (477)
.+.. ++. .+..|+++||||+||..| ||+.++...+....++.++|.. .++....++...|+.- + ..
T Consensus 223 ~e~~---g~~~~~vdi~~gTlsKAlGs~G---g~v~g~~~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l---~-~~ 292 (388)
T COG0156 223 AEHF---GLEPEEVDIIVGTLGKALGSSG---GYIAGSAALIDYLRNRARPFIFSTALPPAVAAAALAALRIL---E-EG 292 (388)
T ss_pred HHHh---CCCCccceEEEEEchhhhcccC---ceeeCcHHHHHHHHHhCCceeccCCCCHHHHHHHHHHHHHH---H-hC
Confidence 3332 222 455789999999999888 9999955544333344444432 2332222333333221 1 12
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCC-CCCCEE
Q 011801 323 VETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQC-TEPGWF 401 (477)
Q Consensus 323 ~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~-~~~~~~ 401 (477)
.+.+++++++...+...+...|+.+.++.. ..+.+-+.... ..+++...++++ ||.+.+...-.- .+...+
T Consensus 293 ~~~r~~L~~~~~~~~~~~~~~~~~~~~s~s-~I~pv~~gd~~------~a~~~s~~l~~~-Gi~v~~i~~PTVp~gtarl 364 (388)
T COG0156 293 PERRERLQELAAFFRSLLKALGLVLLPSES-PIIPVILGDEE------RALEASRALLEE-GIYVSAIRPPTVPKGTARL 364 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCccCCCCC-CeeeeEeCCHH------HHHHHHHHHHHC-CeeEeeecCCCCCCCcceE
Confidence 445677777778888777777887755555 35545454321 123566777777 999987644322 223579
Q ss_pred EEEecc-CCHHHHHHHHHHHHHH
Q 011801 402 RVCFAN-MDDDTLQVALNRIAAF 423 (477)
Q Consensus 402 Rl~~~~-~~~e~l~~~l~~l~~~ 423 (477)
|+|++. +++++++.+++.|.++
T Consensus 365 Ri~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 365 RITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred EEEecCCCCHHHHHHHHHHHHhh
Confidence 999965 4999999999998764
No 199
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.87 E-value=1.3e-19 Score=186.12 Aligned_cols=164 Identities=19% Similarity=0.247 Sum_probs=130.9
Q ss_pred cccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHH----HHhhh
Q 011801 80 AIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDR----DLSWR 155 (477)
Q Consensus 80 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~----~~~~~ 155 (477)
.+|+.+ -..+|++.+|++.+ .+..++++++++|+..++.+++++||.|+++.|.|++... .++..
T Consensus 52 sr~~~p-~~~~le~~lA~l~g----------~~~~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~ 120 (418)
T TIGR01326 52 SRLMNP-TTDVLEQRIAALEG----------GVAALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRL 120 (418)
T ss_pred ECCCCh-hHHHHHHHHHHHhC----------CCeEEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHc
Confidence 445443 35899999999986 2467889999999999999999999999999999976433 34444
Q ss_pred CCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccc
Q 011801 156 TGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAA 235 (477)
Q Consensus 156 ~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~ 235 (477)
|++++.++.+ |++++++++.+ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+.
T Consensus 121 -G~~v~~v~~~-------d~~~l~~~l~~------~t~~V~le~p~NPtg~v~d---l~~I~~la~~~~i~livD~t~~~ 183 (418)
T TIGR01326 121 -GIEVRFVDPD-------DPEEFEKAIDE------NTKAVFAETIGNPAINVPD---IEAIAEVAHAHGVPLIVDNTFAT 183 (418)
T ss_pred -CcEEEEECCC-------CHHHHHHhcCc------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCch
Confidence 9998888742 68889888754 7899999999999999998 78888899999999999999973
Q ss_pred cccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCC
Q 011801 236 TVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFN 284 (477)
Q Consensus 236 ~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~ 284 (477)
..+. .+ + ..+.++++.|+||.+|.+|.|+||+++++
T Consensus 184 ~~~~----~~---l------~~g~Divv~S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 184 PYLC----RP---I------DHGADIVVHSATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred hhcC----Cc---h------hcCCeEEEECccccccCCccceEEEEEec
Confidence 2111 11 1 22467899999999999999999998854
No 200
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.87 E-value=8.9e-20 Score=187.07 Aligned_cols=283 Identities=14% Similarity=0.089 Sum_probs=176.3
Q ss_pred CcEEEeCChHHHHHHHHHHhc----------CCCCeEEEcCCCccchHHHHhhhCCcEEEE---EeccCCCCc----ccC
Q 011801 112 DRIVMGGGATGANELIMFCLA----------NPGDAFLVPSPYYAAFDRDLSWRTGVQIVP---VHCDISNNF----KIT 174 (477)
Q Consensus 112 ~~i~~t~G~t~al~~i~~~l~----------~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~---v~~~~~~~f----~i~ 174 (477)
+.+++++++++|++.++..+. ..++.|++.+-.|.+.....-...+..... .+.. .++ ..|
T Consensus 89 ~~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d 166 (400)
T PTZ00125 89 DKVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFV--PGFELVDYND 166 (400)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCC--CCceEeCCCC
Confidence 588999999999999998763 134788888888877543322111211100 0000 000 127
Q ss_pred HHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCC-HHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhc
Q 011801 175 REALEAAYERAQEASINIKGLIITNPSNPLGTTLD-RDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEM 253 (477)
Q Consensus 175 ~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~-~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~ 253 (477)
+++++++++. .++++|++..++||||.+++ .+.+++|.++|++||+++|+||+|.++...+..+ .. ...
T Consensus 167 ~~~le~~l~~-----~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~-~~-~~~--- 236 (400)
T PTZ00125 167 VEALEKLLQD-----PNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLL-AH-DHE--- 236 (400)
T ss_pred HHHHHHHhCC-----CCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhh-HH-Hhc---
Confidence 8999988851 27899988888999999986 4569999999999999999999998754444321 11 111
Q ss_pred cCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHh--cccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHH
Q 011801 254 DCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKM--SSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAK 331 (477)
Q Consensus 254 ~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~--~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~ 331 (477)
+..++ + .++||.++.+++|+||++++++. .+.+... ......++++|.++.+.|+.-. +. ...+++++
T Consensus 237 ~~~pd--~--~~~sK~l~~g~~~ig~v~~~~~~-~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~--~~---~~~~~~~~ 306 (400)
T PTZ00125 237 GVKPD--I--VLLGKALSGGLYPISAVLANDDV-MLVIKPGEHGSTYGGNPLACAVAVEALEVLK--EE---KLAENAQR 306 (400)
T ss_pred CCCCC--E--EEEcccccCCCcCcEEEEEcHHH-HhhccCCCCCCCCCcCHHHHHHHHHHHHHHH--hc---CHHHHHHH
Confidence 11223 2 25789998433599999996654 4433321 1122356777777766553211 00 11223333
Q ss_pred HHHHHHHHHhh----CCC-eEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEec
Q 011801 332 RHHNFTKGLEQ----VGI-NCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFA 406 (477)
Q Consensus 332 r~~~l~~~L~~----~gi-~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~ 406 (477)
+.+.+.+.|++ .++ .... ..|.++|+.++... . ....++++.++ ++||.+.|+. ++++|++..
T Consensus 307 ~~~~l~~~l~~l~~~~~~~~~~~-~~g~~~~v~~~~~~---~-~~~~~~~~~l~-~~Gv~v~~~~------~~~lRi~~~ 374 (400)
T PTZ00125 307 LGEVFRDGLKELLKKSPWVKEIR-GKGLLNAIVFDHSD---G-VNAWDLCLKLK-ENGLLAKPTH------DNIIRFAPP 374 (400)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEe-cccEEEEEEEccCc---c-hHHHHHHHHHH-HCCeEEeecC------CCEEEEECC
Confidence 44444444443 233 2233 35688888876310 1 12235667766 5599998862 568999975
Q ss_pred c-CCHHHHHHHHHHHHHHHhhhh
Q 011801 407 N-MDDDTLQVALNRIAAFVQQDK 428 (477)
Q Consensus 407 ~-~~~e~l~~~l~~l~~~~~~~~ 428 (477)
. .+++++++++++|.+++++..
T Consensus 375 ~~~~~~~i~~~l~~l~~~l~~~~ 397 (400)
T PTZ00125 375 LVITKEQLDQALEIIKKVLKSFD 397 (400)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHh
Confidence 4 599999999999999987653
No 201
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.87 E-value=1.9e-19 Score=182.71 Aligned_cols=211 Identities=18% Similarity=0.225 Sum_probs=148.5
Q ss_pred CcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhh--hCCcEEEEEe
Q 011801 87 GLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSW--RTGVQIVPVH 164 (477)
Q Consensus 87 G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~--~~g~~~~~v~ 164 (477)
...+|++++|++++ .+++++++|+++|+..++.+++++||.|+++.|.|+.+...+.. ..|+++..+.
T Consensus 54 ~~~~lE~~lA~l~g----------~~~~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~ 123 (385)
T PRK08574 54 TLRPLEEALAKLEG----------GVDALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAY 123 (385)
T ss_pred cHHHHHHHHHHHhC----------CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEEC
Confidence 57899999999986 35788889999999999999999999999999999987655432 1277765543
Q ss_pred ccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcc
Q 011801 165 CDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFT 244 (477)
Q Consensus 165 ~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~ 244 (477)
++.+++++++++. ++|+|++++|+||||.+++ +++|+++|+++|+++|+|++|+.... . .
T Consensus 124 --------~d~~~l~~~i~~~-----~tklV~ie~p~NPtG~v~d---l~~I~~la~~~gi~livD~t~a~~~~-~---~ 183 (385)
T PRK08574 124 --------PSTEDIIEAIKEG-----RTKLVFIETMTNPTLKVID---VPEVAKAAKELGAILVVDNTFATPLL-Y---R 183 (385)
T ss_pred --------CCHHHHHHhcCcc-----CceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCcccc-C---C
Confidence 3578888877531 6899999999999999999 77889999999999999999963211 1 1
Q ss_pred cHHHhhhhccCCCCcEEEEecCCcccCCCCceE-EEEEeCCHHHHHHHHHhcc-cC-CCchHHHHHHHHhcCChhhHHHH
Q 011801 245 SVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRV-GIVYSFNDTVVNCGRKMSS-FG-LVSSQTQYLLASMLSDDEFVDNF 321 (477)
Q Consensus 245 s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~Rv-G~i~~~~~~i~~~~~~~~~-~~-~vs~~~q~~~~~~L~~~~~~~~~ 321 (477)
++ ..+..+++.|+||.++-+|-.+ |++++.++.+.+.++..+. ++ .++++..+++..-|+.-
T Consensus 184 ~l---------~~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~~~g~~~~p~~a~l~l~~l~tL------ 248 (385)
T PRK08574 184 PL---------RHGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRRRLGTIMQPFEAYLVLRGLKTL------ 248 (385)
T ss_pred hh---------hhCCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCcH------
Confidence 11 1134588999999997666554 6677766666555443322 33 24555444444444432
Q ss_pred HHHHHHHHHHHHHHHHHHHhhC
Q 011801 322 LVETSKRLAKRHHNFTKGLEQV 343 (477)
Q Consensus 322 ~~~~~~~l~~r~~~l~~~L~~~ 343 (477)
..+.++..+....+.+.|+++
T Consensus 249 -~~R~~~~~~na~~la~~L~~~ 269 (385)
T PRK08574 249 -EVRFERQCRNAMAIAEFLSEH 269 (385)
T ss_pred -HHHHHHHHHHHHHHHHHHHcC
Confidence 222333344556667777655
No 202
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.87 E-value=4.8e-20 Score=189.09 Aligned_cols=286 Identities=15% Similarity=0.142 Sum_probs=185.3
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcC---------CC-CeEEEcCCCccchHHHHhhhCC
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLAN---------PG-DAFLVPSPYYAAFDRDLSWRTG 157 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~---------~G-d~vlv~~P~y~~~~~~~~~~~g 157 (477)
..+|.+.++++.+ .+++++++++++|++.++.++.. +| +.|++..-+|.+....+....+
T Consensus 85 ~~~l~~~l~~~~~----------~~~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~ 154 (401)
T PRK00854 85 LAPLYEELAALTG----------SHKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFST 154 (401)
T ss_pred HHHHHHHHHhhCC----------CCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccC
Confidence 4556666666543 35899999999999999988742 23 6788888777765433221100
Q ss_pred ------------cEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHH-HHHHHHHHHHhcC
Q 011801 158 ------------VQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRD-TLKSLVSFINDKN 224 (477)
Q Consensus 158 ------------~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~-~l~~l~~~~~~~~ 224 (477)
..+..++. .|++++++++.+ ++++|++++|+||+|.+++.+ .+++|.++|++||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~i~~------~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~g 221 (401)
T PRK00854 155 DPDARGGFGPFTPGFRVVPF-------GDAEALEAAITP------NTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANN 221 (401)
T ss_pred CccccccCCCCCCCeEEeCC-------CCHHHHHHHhCC------CeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 11222221 368888888753 789999999999999999754 5999999999999
Q ss_pred eEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCC-ceEEEEEeCCHHHHHHHHHhcc--cCCCc
Q 011801 225 IHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPG-FRVGIVYSFNDTVVNCGRKMSS--FGLVS 301 (477)
Q Consensus 225 ~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G-~RvG~i~~~~~~i~~~~~~~~~--~~~vs 301 (477)
+++|+||+|.++.+.+..+ .. ... +..++.+ .+||.++ .| +|+|+++++++. .+.+..... ....+
T Consensus 222 i~lI~DEv~~g~g~~g~~~-~~-~~~---g~~~D~~----~~~K~l~-gg~~~ig~v~~~~~~-~~~l~~~~~~~t~~~~ 290 (401)
T PRK00854 222 VTLILDEIQTGLGRTGKLL-AE-EHE---GIEADVT----LIGKALS-GGFYPVSAVLSNSEV-LGVLKPGQHGSTFGGN 290 (401)
T ss_pred CEEEEechhhCCCCCchHh-HH-hhc---CCCCCEE----Eeccccc-CCccCeEEEEEcHHH-HhcccCCCCCCCCCcC
Confidence 9999999998754443211 11 111 1123322 2469997 55 799999996654 333332211 12257
Q ss_pred hHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeE---ecCCceEEEEeeccchhhccCchHHHHHHHH
Q 011801 302 SQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINC---LKSNAGLFFWMDLRHLLKEKTLEGEIALWRT 378 (477)
Q Consensus 302 ~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~---~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ 378 (477)
++.|.++.+.|+..+ . ....+.++++.+++.+.|++.+..+ ..+.+ .++.+.+... . ....++++.
T Consensus 291 ~~~~aa~~a~L~~l~---~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~g-~~~~i~~~~~--~---~~~~~~~~~ 359 (401)
T PRK00854 291 PLACAVARAALKVLT---E--EGMIENAAEMGAYFLEGLRSIRSNIVREVRGRG-LMLAVELEPE--A---GGARQYCEA 359 (401)
T ss_pred HHHHHHHHHHHHHHH---H--cCHHHHHHHHHHHHHHHHHhhccCceEEEeccc-eEEEEEEecC--c---hhHHHHHHH
Confidence 788888877775321 1 2234566777788888888765322 23344 4444444321 0 112256677
Q ss_pred HHHhcCeEEeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHh
Q 011801 379 IVNDVKLNVSPGSSFQCTEPGWFRVCFAN-MDDDTLQVALNRIAAFVQ 425 (477)
Q Consensus 379 ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~-~~~e~l~~~l~~l~~~~~ 425 (477)
+++ .||.+.+. +++++|+++.. .+++++++++++|++++.
T Consensus 360 L~~-~GV~v~~~------~~~~lR~~p~~~~t~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 360 LKE-RGLLAKDT------HDHTIRLAPPLVITREQVDWALEQIAKVLA 400 (401)
T ss_pred HHH-CCeEEecC------CCCEEEEeCCcccCHHHHHHHHHHHHHHhh
Confidence 765 59999753 24689999864 499999999999999874
No 203
>PRK05968 hypothetical protein; Provisional
Probab=99.87 E-value=2e-19 Score=183.15 Aligned_cols=280 Identities=16% Similarity=0.152 Sum_probs=182.0
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchH----HHHhhhCCcEEEEE
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFD----RDLSWRTGVQIVPV 163 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~----~~~~~~~g~~~~~v 163 (477)
..+|++++|++.+. +..+++++++.|+.+++.++++|||.|+++.+.|++.. ..+... |+++..+
T Consensus 65 ~~~le~~lA~l~g~----------~~av~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~-G~~v~~v 133 (389)
T PRK05968 65 VRAFEEMLAKLEGA----------EDARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRM-GVEVDYV 133 (389)
T ss_pred HHHHHHHHHHHhCC----------CcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHc-CceEEEe
Confidence 57999999999861 23444556678999999889999999999999998643 344545 9998887
Q ss_pred eccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCc
Q 011801 164 HCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKF 243 (477)
Q Consensus 164 ~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~ 243 (477)
+.+ |++++++++. ++|+|++++|+||++. ..++++|.++|+++|+.+|+|++|+...+..
T Consensus 134 d~~-------d~~~l~~~i~-------~tklV~ie~pt~~~~~---~~dl~~i~~la~~~gi~vivD~a~a~~~~~~--- 193 (389)
T PRK05968 134 DGR-------DEEAVAKALP-------GAKLLYLESPTSWVFE---LQDVAALAALAKRHGVVTMIDNSWASPVFQR--- 193 (389)
T ss_pred CCC-------CHHHHHHhcc-------cCCEEEEECCCCCCCc---HHHHHHHHHHHHHcCCEEEEECCCcchhccC---
Confidence 642 6788887762 6789999977766654 4669999999999999999999997543222
Q ss_pred ccHHHhhhhccCCCCcEEEEecCCcccCCCC-ceEEEEEeCCHHHHHHHHHh-c-cc-CCCchHHHHHHHHhcCChhhHH
Q 011801 244 TSVAEVIQEMDCNRDLIHIIYSLSKDMGLPG-FRVGIVYSFNDTVVNCGRKM-S-SF-GLVSSQTQYLLASMLSDDEFVD 319 (477)
Q Consensus 244 ~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G-~RvG~i~~~~~~i~~~~~~~-~-~~-~~vs~~~q~~~~~~L~~~~~~~ 319 (477)
++ ..+..++++|+||.++.+| .+.|+++++++.+ +.+++. . .. +.+++..++++...|+.-
T Consensus 194 -p~---------~~g~Divv~S~tK~l~g~~~~~gG~i~~~~~~~-~~l~~~~~~~~g~~~~~~~A~~~l~~L~tl---- 258 (389)
T PRK05968 194 -PI---------TLGVDLVIHSASKYLGGHSDTVAGVVAGSKEHI-ARINAEAYPYLGAKLSPFEAWLLLRGLRTL---- 258 (389)
T ss_pred -ch---------hcCCcEEEeeccccccCCCCeEEEEEEECHHHH-HHHHHHHHHhCCCCCChHHHHHHHcccCcH----
Confidence 11 1123477889999998655 5889988755544 333321 1 12 346666666666666542
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhC-CCeEec-C-----------CceEEEEeeccchhhccCchHHHHHHHHHHHhcCeE
Q 011801 320 NFLVETSKRLAKRHHNFTKGLEQV-GINCLK-S-----------NAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLN 386 (477)
Q Consensus 320 ~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~-~-----------~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~ 386 (477)
..+.++..+..+.+.+.|+++ ++.... | ..|-.+.+++..... ..+++..+ +..++.
T Consensus 259 ---~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~~~------~~~f~~~L-~~~~~~ 328 (389)
T PRK05968 259 ---PLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFREGID------VRAFADAL-KLFRLG 328 (389)
T ss_pred ---HHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECCHHH------HHHHHHhC-CccEEe
Confidence 222333344556677778776 453222 2 123345566653211 12344444 344666
Q ss_pred EeCCCCCCC---------------------CCCCEEEEEeccCCHHHHHHHHHHHHHHHhh
Q 011801 387 VSPGSSFQC---------------------TEPGWFRVCFANMDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 387 v~pg~~f~~---------------------~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~ 426 (477)
++-|..+.. ..++.+|+|++. |+.+.+++-|++++++
T Consensus 329 ~s~G~~~slv~p~~~~~~~~~~~~~~~~~gi~~~liR~SvGl---E~~~dl~~dl~~al~~ 386 (389)
T PRK05968 329 VSWGGHESLVVPAEVVLQQKAQPNSAARFGVSPRSVRLHVGL---EGTEALWADLEQALAA 386 (389)
T ss_pred cCCCCCCceeeeCcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHH
Confidence 666655440 015689999996 4566667777777754
No 204
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.86 E-value=2.4e-19 Score=181.48 Aligned_cols=215 Identities=14% Similarity=0.114 Sum_probs=155.3
Q ss_pred ccCCC--CCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHH----hh
Q 011801 81 IFQDY--HGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDL----SW 154 (477)
Q Consensus 81 ~Y~~~--~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~----~~ 154 (477)
.|... .+...|+++||++.+ .+++++++|+++|+..++.+++++||.|++++|.|+++...+ ..
T Consensus 54 ~Y~r~~npt~~~Le~~iA~le~----------~~~~~~~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~~~~l~~ 123 (394)
T PRK09028 54 FYGRRGTPTHFAFQAAIVELEG----------GAGTALYPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCDKILKG 123 (394)
T ss_pred eecCCCCchHHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHhhhh
Confidence 35553 345699999999864 246899999999999999999999999999999998876543 33
Q ss_pred hCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEeccccc
Q 011801 155 RTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYA 234 (477)
Q Consensus 155 ~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~ 234 (477)
. |+++..++.+ +.+++++++++ ++|+|++++|+||||.+.+ +++|+++|+++|+++|+|++|+
T Consensus 124 ~-Gi~v~~v~~~-------~~e~l~~~l~~------~TklV~lespsNPtg~v~d---l~~I~~la~~~g~~lvvD~t~a 186 (394)
T PRK09028 124 F-GIETTYYDPM-------IGEGIRELIRP------NTKVLFLESPGSITMEVQD---VPTLSRIAHEHDIVVMLDNTWA 186 (394)
T ss_pred c-ceEEEEECCC-------CHHHHHHhcCc------CceEEEEECCCCCCCcHHH---HHHHHHHHHHcCCEEEEECCcc
Confidence 3 7887766532 35667777643 7999999999999988755 8999999999999999999997
Q ss_pred ccccCCCCcccHHHhhhhccCCCCcEEEEecCCccc-CCCCceEEEEEeCCHHHHHHHHHh-c-ccCCCchHHHHHHHHh
Q 011801 235 ATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDM-GLPGFRVGIVYSFNDTVVNCGRKM-S-SFGLVSSQTQYLLASM 311 (477)
Q Consensus 235 ~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~-g~~G~RvG~i~~~~~~i~~~~~~~-~-~~~~vs~~~q~~~~~~ 311 (477)
..+. - .++ ..+..+++.|.+|.+ |..+...|+++.+ +.+.+.++.. . ....+++...+.+..-
T Consensus 187 ~p~~-~---~Pl---------~~GaDivv~S~tK~l~Gh~d~~~G~~~~~-~~~~~~l~~~~~~~G~~~~p~~a~l~~rg 252 (394)
T PRK09028 187 SPIN-S---RPF---------EMGVDISIQAATKYIVGHSDVMLGTATAN-EKHWDQLREHSYLMGQCTSPDDVYLAMRG 252 (394)
T ss_pred cccc-C---Ccc---------ccCceEEEEeCCeEecCCCCEEEEEEECC-HHHHHHHHHHHHhcCCCCCHHHHHHHHcc
Confidence 4211 1 111 235568999999998 5556778877654 4333323322 1 2234677777777777
Q ss_pred cCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 011801 312 LSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV 343 (477)
Q Consensus 312 L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~ 343 (477)
|+.- .-+.++..++...+.+.|+++
T Consensus 253 l~TL-------~lR~~~~~~na~~la~~L~~~ 277 (394)
T PRK09028 253 LRTL-------GVRLAQHEKNALKVANWLATR 277 (394)
T ss_pred cCcH-------HHHHHHHHHHHHHHHHHHhcC
Confidence 7663 333445566777788888876
No 205
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.86 E-value=1.2e-19 Score=184.75 Aligned_cols=278 Identities=17% Similarity=0.226 Sum_probs=178.3
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchH----HHHhhhCCcEEEEE
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFD----RDLSWRTGVQIVPV 163 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~----~~~~~~~g~~~~~v 163 (477)
..+|++.+|++.+ .+ +.+++++| +.|+.+++. ++++||.|+++.|.|++.. ..++.. |+++..+
T Consensus 56 ~~~le~~lA~l~g--------~~-~~v~~~sG-~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~-G~~v~~v 123 (390)
T PRK08064 56 REALEDIIAELEG--------GT-KGFAFASG-MAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRF-GIEHTFV 123 (390)
T ss_pred HHHHHHHHHHHhC--------CC-CeEEECCH-HHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHc-CCEEEEE
Confidence 5789999999986 22 45666555 668888876 6789999999999998544 334445 9999888
Q ss_pred eccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCc
Q 011801 164 HCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKF 243 (477)
Q Consensus 164 ~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~ 243 (477)
+.+ |++++++++.+ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+.....
T Consensus 124 ~~~-------d~~~l~~~l~~------~tklV~l~~p~NptG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~---- 183 (390)
T PRK08064 124 DMT-------NLEEVAQNIKP------NTKLFYVETPSNPLLKVTD---IRGVVKLAKAIGCLTFVDNTFLTPLLQ---- 183 (390)
T ss_pred CCC-------CHHHHHHhcCC------CceEEEEECCCCCCcEecc---HHHHHHHHHHcCCEEEEECCCCccccc----
Confidence 753 57888887754 7899999999999999988 778888899999999999999743211
Q ss_pred ccHHHhhhhccCCCCcEEEEecCCcccC-CCCceEEEEEeCCHHHHHHHHHhcc-cCC-CchHHHHHHHHhcCChhhHHH
Q 011801 244 TSVAEVIQEMDCNRDLIHIIYSLSKDMG-LPGFRVGIVYSFNDTVVNCGRKMSS-FGL-VSSQTQYLLASMLSDDEFVDN 320 (477)
Q Consensus 244 ~s~~~~~~~~~~~~~~viiv~SlSK~~g-~~G~RvG~i~~~~~~i~~~~~~~~~-~~~-vs~~~q~~~~~~L~~~~~~~~ 320 (477)
.++ + .+..+++.|+||.++ .+|...|++++.++.+.+.++.... ++. .++...+.+..-+..
T Consensus 184 ~~~-~--------~g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~g~~~~~~~a~l~~~gl~t------ 248 (390)
T PRK08064 184 KPL-D--------LGADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFGAVLGVQDCWLVLRGLKT------ 248 (390)
T ss_pred Cch-h--------hCCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCc------
Confidence 111 1 134578899999985 3456678888766666666655444 332 233333332222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCC-C-eEec----------------CCceEEEEeeccchhhccCchHHHHHHHHHHHh
Q 011801 321 FLVETSKRLAKRHHNFTKGLEQVG-I-NCLK----------------SNAGLFFWMDLRHLLKEKTLEGEIALWRTIVND 382 (477)
Q Consensus 321 ~~~~~~~~l~~r~~~l~~~L~~~g-i-~~~~----------------~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~ 382 (477)
+..+.++..+....+.+.|++.+ + .++- ...|-.+.+++... +-...+++.
T Consensus 249 -l~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~~----------~~~~~f~~~ 317 (390)
T PRK08064 249 -LHVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQSE----------EAVRQFVSH 317 (390)
T ss_pred -HHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECCH----------HHHHHHHHh
Confidence 33444455666667777777652 1 1110 11233555666421 123455666
Q ss_pred cCe---EEeCCCCC----------CC-----------CCCCEEEEEeccCCHHHHHHHHHHHHHHHhh
Q 011801 383 VKL---NVSPGSSF----------QC-----------TEPGWFRVCFANMDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 383 ~gI---~v~pg~~f----------~~-----------~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~ 426 (477)
.++ .++-|..+ ++ ..++.+|+|++. |+.+.+++.|.+++++
T Consensus 318 l~l~~~~~s~G~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGl---e~~~dli~dl~~Al~~ 382 (390)
T PRK08064 318 VKLPVFAVSLGAVESILSYPAKMSHAAMPKEERDERGITDGLLRLSVGL---ENVDDLIADFEQALSY 382 (390)
T ss_pred CCcceEcccCCCCcceeECCcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHh
Confidence 676 44545211 11 125789999996 4455556666666654
No 206
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.86 E-value=6.5e-20 Score=184.67 Aligned_cols=296 Identities=13% Similarity=0.151 Sum_probs=190.5
Q ss_pred ccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCc
Q 011801 79 IAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGV 158 (477)
Q Consensus 79 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~ 158 (477)
..+|+.+ ...+|++++|++.+ .+++++++|+++|+.+++. ++++||.|+++.+.|.+....+... ..
T Consensus 48 Y~R~~~p-~~~~le~~lA~leg----------~~~~v~~~sG~aAi~~~l~-~l~~GD~VI~~~~~yg~~~~~~~~~-~~ 114 (364)
T PRK07269 48 YTRTKNP-TRAKLEETLAAIES----------ADYALATSSGMSAIVLAFS-VFPVGSKVVAVRDLYGGSFRWFNQQ-EK 114 (364)
T ss_pred eeCCCCc-cHHHHHHHHHHHhC----------CCeEEEeCCHHHHHHHHHH-HhCCCCEEEEecCCcCchHHHHHHH-Hh
Confidence 3455544 47899999999985 5789999999999999984 5699999999999998665433221 00
Q ss_pred EEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEeccccccccc
Q 011801 159 QIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVF 238 (477)
Q Consensus 159 ~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~ 238 (477)
+. .+.. .|..|++++++++++ ++|+|++++|+||||.+.+ +++|+++|+++|+++|+|++|+...+
T Consensus 115 ~~-~~~~----~~~~d~~~l~~~i~~------~TklV~lesP~NPtg~~~d---i~~I~~la~~~gi~vvvD~t~~~~~~ 180 (364)
T PRK07269 115 EG-RFHF----TYANTEEELIAAIEE------DTDIVYIETPTNPLMVEFD---IEKVAKLAHAKGAKVIVDNTFYSPIY 180 (364)
T ss_pred cC-cEEE----EecCCHHHHHHhcCc------CceEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCccccc
Confidence 00 1111 234578999888864 7899999999999999987 88889999999999999999864322
Q ss_pred CCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCC-ceEEEEEeCCHHHHHHHHHhccc--CCCchHHHHHHHHhcCCh
Q 011801 239 SSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPG-FRVGIVYSFNDTVVNCGRKMSSF--GLVSSQTQYLLASMLSDD 315 (477)
Q Consensus 239 ~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G-~RvG~i~~~~~~i~~~~~~~~~~--~~vs~~~q~~~~~~L~~~ 315 (477)
. . ++ .....++++|++|.++-+| .=.|+|+++++.+.+.++..... ..+++...+++..-|+.-
T Consensus 181 ~-~---pl---------~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~~G~~~s~~~a~l~~~~L~tL 247 (364)
T PRK07269 181 Q-R---PI---------ELGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNLNTTGAVLSPFDSYLLMRGLKTL 247 (364)
T ss_pred C-C---ch---------hhCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCcH
Confidence 1 1 11 1133488999999996333 23578888666665555433322 235777777777777652
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhC-CC-eEe-cCCceEEEEeeccchhhccCchHHHHH---HHHHHHhcCeEEeC
Q 011801 316 EFVDNFLVETSKRLAKRHHNFTKGLEQV-GI-NCL-KSNAGLFFWMDLRHLLKEKTLEGEIAL---WRTIVNDVKLNVSP 389 (477)
Q Consensus 316 ~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi-~~~-~~~~g~~~~~~l~~~~~~~~~~~e~~l---~~~ll~~~gI~v~p 389 (477)
..+.++..++...+.+.|+++ ++ .+. ++.+|++.+ .+........|.+.+++ +..+-....+.+.|
T Consensus 248 -------~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg~gg~~sf-~~~~~~~~~~f~~~l~~~~~~~slG~~~sl~~~p 319 (364)
T PRK07269 248 -------SLRMERSTANAQEVVAFLKKSPAVKEVLYTGKGGMISF-KVADETRIPHILNSLKVFTFAESLGGVESLITYP 319 (364)
T ss_pred -------HHHHHHHHHHHHHHHHHHHhCCCccEEeCCCcCcEEEE-EECCHHHHHHHHHhCCcceEccCCCCcCeEeeCC
Confidence 333444456667777778776 33 343 666776544 44321100011111111 11222233556667
Q ss_pred CCCCCCC-----------CCCEEEEEeccCCHHHHHHHHHHHHHHHh
Q 011801 390 GSSFQCT-----------EPGWFRVCFANMDDDTLQVALNRIAAFVQ 425 (477)
Q Consensus 390 g~~f~~~-----------~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~ 425 (477)
++.++.. .++.+|++++. |+.+.+++-|.++++
T Consensus 320 ~~~~~~~~~~~~r~~~Gi~~~liRlsvGl---E~~~dli~dl~~al~ 363 (364)
T PRK07269 320 TTQTHADIPAEVRHSYGLTDDLLRLSIGI---EDARDLIADLKQALE 363 (364)
T ss_pred cccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHhc
Confidence 6554321 25689999995 566777887777664
No 207
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.86 E-value=2.2e-19 Score=181.81 Aligned_cols=174 Identities=17% Similarity=0.334 Sum_probs=133.5
Q ss_pred HHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCC
Q 011801 90 EFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCL-ANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDIS 168 (477)
Q Consensus 90 ~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l-~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~ 168 (477)
++++++++++.+..| .+++++|+|+|+|+.+++.++ .+|||.|+++.|+|+.+...+... |++++.++++.
T Consensus 31 ~~~~~~e~~la~~~g------~~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~~~~~~~~~~~-G~~~v~vd~d~- 102 (376)
T TIGR02379 31 PFSRRCETWLENRTG------TKKALLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAFVLR-GAKIVFVDIRP- 102 (376)
T ss_pred HHHHHHHHHHHHHhC------CCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHHHHc-CCEEEEEecCC-
Confidence 556666666655433 578999999999999999887 799999999999999988888776 99999999985
Q ss_pred CCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccc-cCCCCcccHH
Q 011801 169 NNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATV-FSSPKFTSVA 247 (477)
Q Consensus 169 ~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~-~~~~~~~s~~ 247 (477)
++|.+|++++++++.+ ++|+|+ |+||+|...+ +++|.++|+++|++||+|++|+... +++....+
T Consensus 103 ~~~~~d~~~le~~i~~------~tk~Ii---p~~~~G~~~d---~~~I~~la~~~~i~vIeDaa~~~g~~~~~~~~g~-- 168 (376)
T TIGR02379 103 DTMNIDETLIESAITH------RTKAIV---PVHYAGVACD---MDTIMALANKHQLFVIEDAAQGVMSTYKGRALGS-- 168 (376)
T ss_pred CcCCCCHHHHHHhcCc------CceEEE---EeCCCCCccC---HHHHHHHHHHCCCEEEEECccccCCccCCcccCC--
Confidence 4588999999998764 788876 6678999988 7788889999999999999998432 33322111
Q ss_pred HhhhhccCCCCcEEEEecC--CcccCCCCceEEEEEeCCHHHHHHHHHhcc
Q 011801 248 EVIQEMDCNRDLIHIIYSL--SKDMGLPGFRVGIVYSFNDTVVNCGRKMSS 296 (477)
Q Consensus 248 ~~~~~~~~~~~~viiv~Sl--SK~~g~~G~RvG~i~~~~~~i~~~~~~~~~ 296 (477)
+ . .+.+.|| +|.+. +|.+.|+++++++.+.+.++.++.
T Consensus 169 -~--------~-~~~~fSf~~~K~l~-~g~~gG~v~~~~~~~~~~~~~~~~ 208 (376)
T TIGR02379 169 -I--------G-HLGTFSFHETKNYT-SGGEGGALLINDQAFIERAEIIRE 208 (376)
T ss_pred -C--------C-CEEEEeCCCCCcCc-ccCCceEEEECCHHHHHHHHHHHH
Confidence 0 1 1223343 38885 788999999988887777665544
No 208
>PLN00144 acetylornithine transaminase
Probab=99.86 E-value=1.7e-19 Score=183.18 Aligned_cols=288 Identities=16% Similarity=0.101 Sum_probs=185.9
Q ss_pred HHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhc---C------C------CCeEEEcCCCccchHHHHhh
Q 011801 90 EFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLA---N------P------GDAFLVPSPYYAAFDRDLSW 154 (477)
Q Consensus 90 ~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~---~------~------Gd~vlv~~P~y~~~~~~~~~ 154 (477)
+....+|+.+.+.. ..+++++++++++|++.+++.-. . + ..+|+...-+|++....+..
T Consensus 57 ~~~~~la~~l~~~~------~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s 130 (382)
T PLN00144 57 IPQVELAKRLVASS------FADRVFFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALA 130 (382)
T ss_pred HHHHHHHHHHHhcC------CCCeEEEeCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHh
Confidence 44455666554321 24689999999999999887631 1 0 24689889888886543332
Q ss_pred hCCcE------------EEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCC--HHHHHHHHHHH
Q 011801 155 RTGVQ------------IVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLD--RDTLKSLVSFI 220 (477)
Q Consensus 155 ~~g~~------------~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~--~~~l~~l~~~~ 220 (477)
.++-. +..++. -|++++++.++. .++++|++.--+|| |.+++ .+.+++|.++|
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~-----~~~aavi~eP~q~~-gg~~~~~~~~~~~l~~l~ 197 (382)
T PLN00144 131 LTSKEQYRTPFEPLMPGVTFVEY-------GNLEAARKLIQK-----GKTAAVFVEPVQGE-GGIYPATKEFLQGLRALC 197 (382)
T ss_pred cCCCccccccCCCCCCCeEEeCC-------CCHHHHHHhcCC-----CCeEEEEEccccCC-CCCccCCHHHHHHHHHHH
Confidence 21211 111111 167888877742 26777665533788 54444 44599999999
Q ss_pred HhcCeEEEecccccccccCCCCccc-HHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHH--hccc
Q 011801 221 NDKNIHLVCDEIYAATVFSSPKFTS-VAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRK--MSSF 297 (477)
Q Consensus 221 ~~~~~~lI~De~y~~~~~~~~~~~s-~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~--~~~~ 297 (477)
++||+++|+||+|.++...+..+.. ...+ .+| +.||||.++ +|+|+|+++++++ +.+.+.. ..+-
T Consensus 198 ~~~g~llI~DEv~tg~gr~g~~~~~~~~~~------~PD----i~t~sK~l~-~G~pig~v~~~~~-~~~~~~~~~~~~T 265 (382)
T PLN00144 198 DEAGALLVFDEVQCGLGRTGYLWAHEAYGV------EPD----IMTLAKPLA-GGLPIGAVLVTEK-VASAINPGDHGST 265 (382)
T ss_pred HHcCCEEEEechhhCCCccchHhhhhhcCC------CCC----EEEeccccc-CCcceEEEEEcHH-HHhccCCCCCCCC
Confidence 9999999999999986555432211 1111 344 669999998 9999999999655 4433321 1222
Q ss_pred CCCchHHHHHHH---HhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchhhccCchHHHH
Q 011801 298 GLVSSQTQYLLA---SMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIA 374 (477)
Q Consensus 298 ~~vs~~~q~~~~---~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~ 374 (477)
+..+++++.++. .+++++++ .+++++..+.++ +.+.+.+.+.+....-...|+++|+.+.. . ...
T Consensus 266 ~~~~pl~~aaa~a~l~~i~~~~~-~~~~~~~g~~l~---~~l~~~~~~~~~~~~vrg~G~~~~l~l~~--~------~~~ 333 (382)
T PLN00144 266 FAGGPLVCNAALAVLDKISKPGF-LASVAKKGEYLR---ELLRRKLGGNPHVKEVRGVGLLVGIQLDV--P------AGP 333 (382)
T ss_pred CCCCHHHHHHHHHHHHHHhhchH-HHHHHHHHHHHH---HHHHHHHhhCCCceeeecCceEEEEEecC--c------cHH
Confidence 236778888877 55566655 455666555553 33444455543211112378999999831 1 124
Q ss_pred HHHHHHHhcCeEEeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHhh
Q 011801 375 LWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFAN-MDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 375 l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~-~~~e~l~~~l~~l~~~~~~ 426 (477)
++..++ +.||.+.|+.. ...+|++++. ++++++++++++|.+++.+
T Consensus 334 ~~~~~~-~~Gv~i~~~~~-----~~~lrl~p~~~~~~~~i~~~~~~l~~~l~~ 380 (382)
T PLN00144 334 LVDACR-DSGLLVLTAGK-----GDVVRLVPPLVISEAELEQAVEILADCLPA 380 (382)
T ss_pred HHHHHH-HCCeEEeecCC-----CCEEEEeCCCccCHHHHHHHHHHHHHHHHh
Confidence 555555 56999998721 3689999988 6999999999999999865
No 209
>PLN02651 cysteine desulfurase
Probab=99.86 E-value=6.7e-20 Score=185.56 Aligned_cols=280 Identities=16% Similarity=0.197 Sum_probs=188.7
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHh----cCCCCeEEEcCCCccchHHH---HhhhCCcEE
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCL----ANPGDAFLVPSPYYAAFDRD---LSWRTGVQI 160 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l----~~~Gd~vlv~~P~y~~~~~~---~~~~~g~~~ 160 (477)
+.++|+.++++++ .++++|++|+|+|+++.+++..+ .++||.|++....|+.+... ++.. |+++
T Consensus 45 ~~~~r~~la~~~g--------~~~~~v~~t~~~t~a~~~~l~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~~~~~-g~~v 115 (364)
T PLN02651 45 VEKARAQVAALIG--------ADPKEIIFTSGATESNNLAIKGVMHFYKDKKKHVITTQTEHKCVLDSCRHLQQE-GFEV 115 (364)
T ss_pred HHHHHHHHHHHhC--------CCCCeEEEeCCHHHHHHHHHHHHHHhccCCCCEEEEcccccHHHHHHHHHHHhc-CCEE
Confidence 4577888888876 56789999999999988877554 47899999998777765433 3334 8899
Q ss_pred EEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCC
Q 011801 161 VPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSS 240 (477)
Q Consensus 161 ~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~ 240 (477)
+.++++. ++.+|++++++++++ +++++++++++||||.+.+ +++|.++|+++|+++++|.+++. ..
T Consensus 116 ~~v~~~~--~~~~d~~~l~~~i~~------~t~lv~v~~~~n~tG~~~~---l~~I~~~~~~~g~~~~vD~a~~~---g~ 181 (364)
T PLN02651 116 TYLPVKS--DGLVDLDELAAAIRP------DTALVSVMAVNNEIGVIQP---VEEIGELCREKKVLFHTDAAQAV---GK 181 (364)
T ss_pred EEEccCC--CCcCCHHHHHHhcCC------CcEEEEEECCCCCceeccc---HHHHHHHHHHcCCEEEEEcchhh---CC
Confidence 8888763 467899999998864 7889999999999999999 78889999999999999999973 22
Q ss_pred CCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHh--------cccCCCchHHHHHHHHhc
Q 011801 241 PKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKM--------SSFGLVSSQTQYLLASML 312 (477)
Q Consensus 241 ~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~--------~~~~~vs~~~q~~~~~~L 312 (477)
-+ ..+. ..+..+++.|.+|.+| ...+|+++..++......... ...++.+.....++.+.|
T Consensus 182 ~~-~~~~--------~~~~D~~~~s~hK~~g--p~G~g~l~v~~~~~~~l~p~~~g~~~~~~~~~GT~~~~~~~~l~~al 250 (364)
T PLN02651 182 IP-VDVD--------DLGVDLMSISGHKIYG--PKGVGALYVRRRPRVRLEPLMSGGGQERGRRSGTENTPLVVGLGAAC 250 (364)
T ss_pred cc-cCcc--------cCCCCEEEechhhhCC--CCceEEEEEcCCCCCCCCccccCCCccCCccCCCccHHHHHHHHHHH
Confidence 11 1211 2244578889999654 345899988664332111001 112334444445555554
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHhh-C-CCeEecCCc-----eEEEEeeccchhhccCchHHHHHHHHHHHhcCe
Q 011801 313 SDDEFVDNFLVETSKRLAKRHHNFTKGLEQ-V-GINCLKSNA-----GLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKL 385 (477)
Q Consensus 313 ~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~-~-gi~~~~~~~-----g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI 385 (477)
+- +.+..++..++.++..+++.+.|++ + |+++..+.. ...+.+.++.. + .+ ++...| .+ |
T Consensus 251 ~~---~~~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~~~-~-----~~-~~~~~L-~~--i 317 (364)
T PLN02651 251 EL---AMKEMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFAYV-E-----GE-SLLMGL-KE--V 317 (364)
T ss_pred HH---HHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeCCC-C-----HH-HHHHHh-CC--E
Confidence 32 2223455667777788888888875 3 777765411 12444445421 1 11 344444 43 9
Q ss_pred EEeCCCCCCCC-----------------CCCEEEEEeccC-CHHHHH
Q 011801 386 NVSPGSSFQCT-----------------EPGWFRVCFANM-DDDTLQ 414 (477)
Q Consensus 386 ~v~pg~~f~~~-----------------~~~~~Rl~~~~~-~~e~l~ 414 (477)
.++.|+.|... ..+.+|+|++.. |++|+|
T Consensus 318 ~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 318 AVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred EEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 99999877543 137899999876 777764
No 210
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.86 E-value=6.8e-19 Score=179.44 Aligned_cols=296 Identities=14% Similarity=0.149 Sum_probs=190.3
Q ss_pred ccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhc--------------CCCCeEEEcCCC
Q 011801 79 IAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLA--------------NPGDAFLVPSPY 144 (477)
Q Consensus 79 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~--------------~~Gd~vlv~~P~ 144 (477)
+..|.+++ .+|.+++|+|++ .+..++.+.+..|+..++.+|+ +++|.|+...-.
T Consensus 142 ~~G~~~~h--~~LE~~LA~f~g----------~e~all~sSGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~ 209 (476)
T PLN02955 142 ICGYTTYH--RLLESSLADLKK----------KEDCLVCPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALN 209 (476)
T ss_pred cccChHHH--HHHHHHHHHHHC----------CCcEEEECChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccc
Confidence 44454443 789999999997 3566777777888888888872 456778887778
Q ss_pred ccchHHHHhhhC---CcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCC-CCCcccCCCHHHHHHHHHHH
Q 011801 145 YAAFDRDLSWRT---GVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNP-SNPLGTTLDRDTLKSLVSFI 220 (477)
Q Consensus 145 y~~~~~~~~~~~---g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP-~NPtG~~~~~~~l~~l~~~~ 220 (477)
|......++... +++++.++. -|++.|++.+++.. .+.+ ++++.+ -++.|.+.+ +++|.++|
T Consensus 210 HaSI~dG~~ls~~~~~a~~~~f~H-------ND~~~Le~~L~~~~---~~~~-~Vv~EgV~SmdGdiap---L~eL~~L~ 275 (476)
T PLN02955 210 HASIIDGVRLAERQGNVEVFVYRH-------CDMYHLNSLLSSCK---MKRK-VVVTDSLFSMDGDFAP---MEELSQLR 275 (476)
T ss_pred hHHHHHHHHhccccCCceEEEeCC-------CCHHHHHHHHHhCC---CCce-EEEEeCCCCCCCCcCC---HHHHHHHH
Confidence 877776666431 366666552 27899999987542 1334 455555 689999999 77788888
Q ss_pred HhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHh-ccc--
Q 011801 221 NDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKM-SSF-- 297 (477)
Q Consensus 221 ~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~-~~~-- 297 (477)
++||+++|+||+|+..+++... ....+.. +...+..++++||||++|..| ||++++++ +.+.++.. .++
T Consensus 276 ~~~ga~LiVDEAH~~Gv~G~~G-~G~~e~~---g~~~di~ii~~TLsKA~G~~G---Gfi~gs~~-~~~~l~~~~~~~if 347 (476)
T PLN02955 276 KKYGFLLVIDDAHGTFVCGENG-GGVAEEF---NCEADVDLCVGTLSKAAGCHG---GFIACSKK-WKQLIQSRGRSFIF 347 (476)
T ss_pred HHcCcEEEEcccccCceecCCC-CcHHHHh---CCCCCCcEEEEeCccchhccC---ceeecHHH-HHHHHHHhCCCCee
Confidence 8999999999999976665422 3333322 224577899999999998777 99999654 45555433 232
Q ss_pred CCCchHHH-HHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchhhccCchHHHHHH
Q 011801 298 GLVSSQTQ-YLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALW 376 (477)
Q Consensus 298 ~~vs~~~q-~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~ 376 (477)
++..++.. .++.+.+. .+.. -...+++|.++.+++.+. .|+.+. ...+.+.+... ....+++
T Consensus 348 Stalpp~~aaa~laal~---l~~~-~~~~r~~L~~n~~~fr~~---~G~~~~----sPI~pI~ig~~------~~a~~~~ 410 (476)
T PLN02955 348 STAIPVPMAAAAYAAVV---VARK-EKWRRKAIWERVKEFKAL---SGVDIS----SPIISLVVGNQ------EKALKAS 410 (476)
T ss_pred cccccHHHHHHHHHHHH---HHhc-CHHHHHHHHHHHHHHHHh---cCCCCC----CCEEEEEeCCH------HHHHHHH
Confidence 22222222 22222221 1111 123456777777777763 365531 23333444422 2223566
Q ss_pred HHHHHhcCeEEeCCCCCCC-CCCCEEEEEecc-CCHHHHHHHHHHHHHHHhh
Q 011801 377 RTIVNDVKLNVSPGSSFQC-TEPGWFRVCFAN-MDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 377 ~~ll~~~gI~v~pg~~f~~-~~~~~~Rl~~~~-~~~e~l~~~l~~l~~~~~~ 426 (477)
+.|++ .||.+.+...-.. .+...+|+++.. .++++++.+++.|+++.+.
T Consensus 411 ~~L~~-~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~lv~~L~~~~~~ 461 (476)
T PLN02955 411 RYLLK-SGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLITALSSCLDF 461 (476)
T ss_pred HHHHH-CCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHHHHHHHHHHhh
Confidence 66665 5999986543322 223479999965 4999999999999988765
No 211
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.86 E-value=4.4e-19 Score=182.22 Aligned_cols=156 Identities=21% Similarity=0.301 Sum_probs=125.9
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHH----HHhhhCCcEEEEE
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDR----DLSWRTGVQIVPV 163 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~----~~~~~~g~~~~~v 163 (477)
...|.+.+|++.+ .+..++++|+++|+..++..++++||.|+++.|.|++... .++.. |++++.+
T Consensus 66 ~~~Le~~lA~leg----------~~~al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~-Gv~v~~v 134 (431)
T PRK08248 66 TDVFEKRIAALEG----------GIGALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKL-GITVKFV 134 (431)
T ss_pred HHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhC-CEEEEEE
Confidence 5788888999876 3567889999999999999999999999999999976433 34445 9999888
Q ss_pred eccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCc
Q 011801 164 HCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKF 243 (477)
Q Consensus 164 ~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~ 243 (477)
+.. |++++++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|+.. +. .
T Consensus 135 d~~-------d~e~l~~ai~~------~tklV~l~sp~NPtG~v~d---i~~I~~la~~~gi~vIvD~t~a~~-~~---~ 194 (431)
T PRK08248 135 DPS-------DPENFEAAITD------KTKALFAETIGNPKGDVLD---IEAVAAIAHEHGIPLIVDNTFASP-YL---L 194 (431)
T ss_pred CCC-------CHHHHHHhcCC------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEeCCCCcc-cc---C
Confidence 752 68888888754 7899999999999999999 678888999999999999998621 11 1
Q ss_pred ccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeC
Q 011801 244 TSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSF 283 (477)
Q Consensus 244 ~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~ 283 (477)
.++ ..+..+++.|++|.+|.+|.++|++++.
T Consensus 195 ~pl---------~~gaDivv~S~tK~lgg~g~~~Gg~v~~ 225 (431)
T PRK08248 195 RPI---------EHGADIVVHSATKFIGGHGTSIGGVIVD 225 (431)
T ss_pred Chh---------HcCCCEEEEcCccccCCCCCceEEEEEe
Confidence 111 1245688899999999999999998774
No 212
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.86 E-value=5.8e-19 Score=178.85 Aligned_cols=214 Identities=19% Similarity=0.241 Sum_probs=148.4
Q ss_pred ccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHH----HHhhhC
Q 011801 81 IFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDR----DLSWRT 156 (477)
Q Consensus 81 ~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~----~~~~~~ 156 (477)
+|+++ -..+|++.+|++.+ . ...+++++| +.++..++ .+++|||.|+++.|.|++... .+...
T Consensus 46 r~~~p-~~~~Le~~lA~l~g--------~-~~~~~~~sG-~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~- 112 (377)
T PRK07671 46 RTGNP-TRAALEELIAVLEG--------G-HAGFAFGSG-MAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRF- 112 (377)
T ss_pred CCCCh-HHHHHHHHHHHHhC--------C-CceEEeCCH-HHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcC-
Confidence 44433 36799999999986 1 234665555 56887765 577899999999999985433 23334
Q ss_pred CcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEeccccccc
Q 011801 157 GVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAAT 236 (477)
Q Consensus 157 g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~ 236 (477)
|++++.++. .|++++++++++ ++|+|++++|+||||.+.+ +++|.++|+++|+++|+|++|+..
T Consensus 113 G~~v~~v~~-------~d~~~l~~ai~~------~tklV~le~P~NPtg~~~d---l~~I~~la~~~g~~lvvD~a~~~~ 176 (377)
T PRK07671 113 GIEHTFVDT-------SNLEEVEEAIRP------NTKAIYVETPTNPLLKITD---IKKISTIAKEKGLLTIVDNTFMTP 176 (377)
T ss_pred CeEEEEECC-------CCHHHHHHhcCC------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCCcc
Confidence 888888763 278889888854 7899999999999999987 778888889999999999999753
Q ss_pred ccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCC-ceEEEEEeCCHHHHHHHHHhccc--CCCchHHHHHHHHhcC
Q 011801 237 VFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPG-FRVGIVYSFNDTVVNCGRKMSSF--GLVSSQTQYLLASMLS 313 (477)
Q Consensus 237 ~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G-~RvG~i~~~~~~i~~~~~~~~~~--~~vs~~~q~~~~~~L~ 313 (477)
.+.. ++ ..+..++++|+||.+|-++ .-.|++++.++.+.+.++.++.. +..++...+.+..-+.
T Consensus 177 ~~~~----p~---------~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~~~g~~~~~~~a~l~~~~l~ 243 (377)
T PRK07671 177 YWQS----PI---------SLGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNSTGGILGPQDSWLLLRGLK 243 (377)
T ss_pred ccCC----hh---------hhCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHHHHhhcCCCCHHHHHHHHcCcC
Confidence 2321 11 1133588999999997443 45677777666666655554444 3355555554444333
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 011801 314 DDEFVDNFLVETSKRLAKRHHNFTKGLEQV 343 (477)
Q Consensus 314 ~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~ 343 (477)
. +..+.++..++...+.+.|++.
T Consensus 244 t-------l~~R~~~~~~na~~la~~L~~~ 266 (377)
T PRK07671 244 T-------LGIRMEEHETNSRAIAEFLNNH 266 (377)
T ss_pred h-------HHHHHHHHHHHHHHHHHHHHcC
Confidence 3 3334555667777888888765
No 213
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.85 E-value=6.2e-19 Score=178.83 Aligned_cols=281 Identities=16% Similarity=0.168 Sum_probs=182.5
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHH----HhhhCCcEEEEE
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRD----LSWRTGVQIVPV 163 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~----~~~~~g~~~~~v 163 (477)
..+|++.+|++++ .++++++++++.|+.+++. ++++||.|+++.+.|+++... +... |++++.+
T Consensus 49 ~~~le~~la~l~g----------~~~~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~-G~~v~~v 116 (378)
T TIGR01329 49 RTALESLLAKLDK----------ADRAFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRS-GVVVVHV 116 (378)
T ss_pred HHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHc-CcEEEEe
Confidence 4566777777664 2466667777789998776 779999999999999887553 3334 9999888
Q ss_pred eccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCc
Q 011801 164 HCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKF 243 (477)
Q Consensus 164 ~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~ 243 (477)
+++ |++++++++++ ++|+|++++|+||+|.+.+ +++|+++|+++|+++|+|++|+.. .. .
T Consensus 117 d~~-------d~~~le~~i~~------~tklv~le~psnptg~v~d---l~~I~~la~~~g~~vivD~a~~~~-~~---~ 176 (378)
T TIGR01329 117 DTT-------DLDKVKAALGP------KTKLVLLESPTNPLQKIVD---IRKISEMAHAQNALVVVDNTMMSP-LL---C 176 (378)
T ss_pred CCC-------CHHHHHHhcCc------CceEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCccc-cc---C
Confidence 753 68889888753 7899999999999999998 889999999999999999998532 11 1
Q ss_pred ccHHHhhhhccCCCCcEEEEecCCcccCC-CCceEEEEEeCCHHHHHHHHHhcc-cC-CCchHHHHHHHHhcCChhhHHH
Q 011801 244 TSVAEVIQEMDCNRDLIHIIYSLSKDMGL-PGFRVGIVYSFNDTVVNCGRKMSS-FG-LVSSQTQYLLASMLSDDEFVDN 320 (477)
Q Consensus 244 ~s~~~~~~~~~~~~~~viiv~SlSK~~g~-~G~RvG~i~~~~~~i~~~~~~~~~-~~-~vs~~~q~~~~~~L~~~~~~~~ 320 (477)
.++ . .+..++++|++|.++- .+.+.|++++.++.+.+.++.... .+ ..++...+.+..-++.-
T Consensus 177 ~~l-~--------~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~~~~l~tl----- 242 (378)
T TIGR01329 177 NPL-E--------LGADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQNSTGSGLAPFDCWLLLRGIKTL----- 242 (378)
T ss_pred Chh-h--------cCCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHHHHHhcCCcCCHHHHHHHHccCCCH-----
Confidence 121 1 1334888999998853 347899999877666554443332 22 34555555444444432
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCC-C-eEec----------------CCceEEEEeeccchhhccCchHHHHHHHHHHHh
Q 011801 321 FLVETSKRLAKRHHNFTKGLEQVG-I-NCLK----------------SNAGLFFWMDLRHLLKEKTLEGEIALWRTIVND 382 (477)
Q Consensus 321 ~~~~~~~~l~~r~~~l~~~L~~~g-i-~~~~----------------~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~ 382 (477)
..+.++..++...+.+.|+++. + .+.- ...|-.+.+++.. . +...++...+ +.
T Consensus 243 --~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~-~-----~~~~~~~~~L-~~ 313 (378)
T TIGR01329 243 --AIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGS-V-----ALSKRLVEAT-KL 313 (378)
T ss_pred --HHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECC-H-----HHHHHHHHhC-cC
Confidence 2223333444455555665541 1 1110 1123355566632 1 1112344444 55
Q ss_pred cCeEEeCCCCCCC---------------------CCCCEEEEEeccCCHHHHHHHHHHHHHHHhh
Q 011801 383 VKLNVSPGSSFQC---------------------TEPGWFRVCFANMDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 383 ~gI~v~pg~~f~~---------------------~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~ 426 (477)
.++.++-|..... ..++.+|++++. |+.+.+++-|.+++++
T Consensus 314 ~~i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~~ 375 (378)
T TIGR01329 314 FSITVSFGSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVGI---EDVDDLISDLDIAFVT 375 (378)
T ss_pred cccccCCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHh
Confidence 6777777765421 125689999995 5677778888887764
No 214
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.85 E-value=3.8e-19 Score=174.43 Aligned_cols=298 Identities=19% Similarity=0.246 Sum_probs=211.7
Q ss_pred CcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHH--hcC----CCCeEEEcCCCccchHHHHhhh--CCc
Q 011801 87 GLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFC--LAN----PGDAFLVPSPYYAAFDRDLSWR--TGV 158 (477)
Q Consensus 87 G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~--l~~----~Gd~vlv~~P~y~~~~~~~~~~--~g~ 158 (477)
.+.+-|+.||+.++ ++|++|++|+|+||++++++.. ... .|..|++..--++.....+++. -|.
T Consensus 45 ~ve~AR~~iA~llg--------a~~~eIiFTSG~TEsnNlaI~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~ 116 (386)
T COG1104 45 AVEEAREQIAKLLG--------ADPEEIIFTSGATESNNLAIKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGF 116 (386)
T ss_pred HHHHHHHHHHHHhC--------CCCCeEEEecCCcHHHHHHHHhhHHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCC
Confidence 36788888999887 6789999999999999999987 322 4778999888888877666543 388
Q ss_pred EEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEeccccccccc
Q 011801 159 QIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVF 238 (477)
Q Consensus 159 ~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~ 238 (477)
++..++++. +..+|+++|++++++ ++.+|-+...||-+|++.| +++|.++|+++++++++|.+.+ +
T Consensus 117 ~Vtyl~V~~--~G~v~~e~L~~al~~------~T~LVSim~aNnE~G~IQp---I~ei~~i~k~~~i~fHvDAvQa---~ 182 (386)
T COG1104 117 EVTYLPVDS--NGLVDLEQLEEALRP------DTILVSIMHANNETGTIQP---IAEIGEICKERGILFHVDAVQA---V 182 (386)
T ss_pred eEEEeCCCC--CCeEcHHHHHHhcCC------CceEEEEEecccCeeeccc---HHHHHHHHHHcCCeEEEehhhh---c
Confidence 999999886 447999999999975 7888889999999999999 8889999999999999999997 4
Q ss_pred CCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHH-HH------HHhcccCCCchHHHHHHHHh
Q 011801 239 SSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVN-CG------RKMSSFGLVSSQTQYLLASM 311 (477)
Q Consensus 239 ~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~-~~------~~~~~~~~vs~~~q~~~~~~ 311 (477)
+.-+ ..+.. ........|-+|..|.-| +|.++..+..-.. .+ +.+++ ++.+.+.-.++..+
T Consensus 183 Gkip-i~~~~--------~~vD~ls~SaHK~~GpkG--iGaLyv~~~~~~~p~i~GGgQE~g~Rs-GTenv~~Ivg~~~A 250 (386)
T COG1104 183 GKIP-IDLEE--------LGVDLLSFSAHKFGGPKG--IGALYVRPGVRLEPLIHGGGQERGLRS-GTENVPGIVGFGKA 250 (386)
T ss_pred Ccee-ccccc--------cCcceEEeehhhccCCCc--eEEEEECCCCccCceeccCcCCCCCCC-CCccHHHHHHHHHH
Confidence 4322 22221 123455668899999777 8888874432111 00 11111 23444444444444
Q ss_pred cCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC--CCeEecCC---ceEEEEeeccchhhccCchHHHHHHHHHHHhcCeE
Q 011801 312 LSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV--GINCLKSN---AGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLN 386 (477)
Q Consensus 312 L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~--gi~~~~~~---~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~ 386 (477)
++.. .+.++....++...|+.|.+.|.+. ++.+.... ....+-+.++. ++. +.....++..||.
T Consensus 251 ~~~a---~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~g------v~g--E~ll~~L~~~gI~ 319 (386)
T COG1104 251 AEIA---VEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPG------VEG--ESLLLALDLAGIA 319 (386)
T ss_pred HHHH---HHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCC------CcH--HHHHHhccccCeE
Confidence 4321 2335566677888889999999875 33322221 12233344442 223 3445567788999
Q ss_pred EeCCCCCCCCC-----------------CCEEEEEeccC-CHHHHHHHHHHHHHHHhhhhc
Q 011801 387 VSPGSSFQCTE-----------------PGWFRVCFANM-DDDTLQVALNRIAAFVQQDKE 429 (477)
Q Consensus 387 v~pg~~f~~~~-----------------~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~~~~~ 429 (477)
++.||.|.... .+.+|++|+.. ++++++.+++.+++++++.++
T Consensus 320 vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~i~~lr~ 380 (386)
T COG1104 320 VSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEIIKRLRE 380 (386)
T ss_pred EeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 99999996431 35899999886 899999999999999988654
No 215
>PRK05939 hypothetical protein; Provisional
Probab=99.85 E-value=1.5e-18 Score=176.61 Aligned_cols=215 Identities=17% Similarity=0.193 Sum_probs=150.2
Q ss_pred ccCCCCCcH---HHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHH---HHhh
Q 011801 81 IFQDYHGLP---EFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDR---DLSW 154 (477)
Q Consensus 81 ~Y~~~~G~~---~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~---~~~~ 154 (477)
.|... |.| +|++++|++.+ .+..+++++++.|+..++.+++++||.|+++++.|+.... .++.
T Consensus 40 ~Y~r~-g~p~~~~lE~~la~leg----------~~~~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~ 108 (397)
T PRK05939 40 TYARQ-GTPTTAALEAKITKMEG----------GVGTVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLRG 108 (397)
T ss_pred CcCCC-CCHHHHHHHHHHHHHhC----------CCeEEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHHh
Confidence 35443 445 89999999876 2234455555899999999999999999999999986543 3444
Q ss_pred hCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEeccccc
Q 011801 155 RTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYA 234 (477)
Q Consensus 155 ~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~ 234 (477)
. |++++.++.. |++++++++++ ++|+|++++|+||||.+.+ +++|+++|+++|+++|+|++|+
T Consensus 109 ~-G~~v~~v~~~-------d~e~l~~~l~~------~tklV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~t~a 171 (397)
T PRK05939 109 L-GVEVTMVDAT-------DVQNVAAAIRP------NTRMVFVETIANPGTQVAD---LAGIGALCRERGLLYVVDNTMT 171 (397)
T ss_pred c-CCEEEEECCC-------CHHHHHHhCCC------CCeEEEEECCCCCCCCHHh---HHHHHHHHHHcCCEEEEECCcc
Confidence 4 9998888752 68889888754 7999999999999999965 9999999999999999999986
Q ss_pred ccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHH----------------------HHHHHH
Q 011801 235 ATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDT----------------------VVNCGR 292 (477)
Q Consensus 235 ~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~----------------------i~~~~~ 292 (477)
.... +.+ . ..+..++++|+||.++..|.++|+++..+.. +.....
T Consensus 172 ~~~~----~~~---~------~~gaDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (397)
T PRK05939 172 SPWL----FRP---K------DVGASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRK 238 (397)
T ss_pred cccc----cCc---c------ccCCEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHH
Confidence 3210 000 0 2256689999999999889999998874321 111111
Q ss_pred -Hhccc-CCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 011801 293 -KMSSF-GLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV 343 (477)
Q Consensus 293 -~~~~~-~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~ 343 (477)
.+..+ ..+++...+++..-++.- ..+.++..++...+.+.|+++
T Consensus 239 ~~~~~~G~~~~p~~a~l~~rgl~tl-------~~R~~~~~~na~~la~~L~~~ 284 (397)
T PRK05939 239 KGLRDMGATLSSEAAHRIAIGAETL-------ALRVDRSCSNALALAQFLEAH 284 (397)
T ss_pred HHHHhcCCCCCHHHHHHHHcCcCcH-------HHHHHHHHHHHHHHHHHHHhC
Confidence 11122 235666666665555543 223344455667777788765
No 216
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.85 E-value=4.3e-20 Score=181.33 Aligned_cols=169 Identities=19% Similarity=0.259 Sum_probs=133.0
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccC
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDI 167 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~ 167 (477)
+.++++.+|++++ . .+.+++++|+++++..++.++++|||.|+++.|+|..+...+... |++++.++.+.
T Consensus 61 i~~~~~~~A~~~g--------a-~~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~~~-g~~~~~v~~~~ 130 (294)
T cd00615 61 IKEAQELAARAFG--------A-KHTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLS-GAVPVYLKPER 130 (294)
T ss_pred HHHHHHHHHHHhC--------C-CCEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHC-CCEEEEecCcc
Confidence 7889999999986 1 234556999999999999999999999999999999888888776 99988887754
Q ss_pred CCC----cccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEeccccccc-ccCCCC
Q 011801 168 SNN----FKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAAT-VFSSPK 242 (477)
Q Consensus 168 ~~~----f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~-~~~~~~ 242 (477)
..+ ..+|++++++++++ +.++++|++++| ||+|.+++ +++|+++|+++|+++|+||+|+.. .|.+..
T Consensus 131 ~~~~~~~~~i~~~~l~~~l~~----~~~~k~v~l~~p-~~~G~~~d---l~~I~~~~~~~g~~livDeA~~~~~~~~~~~ 202 (294)
T cd00615 131 NPYYGIAGGIPPETFKKALIE----HPDAKAAVITNP-TYYGICYN---LRKIVEEAHHRGLPVLVDEAHGAHFRFHPIL 202 (294)
T ss_pred CcccCcCCCCCHHHHHHHHHh----CCCceEEEEECC-CCCCEecC---HHHHHHHHHhcCCeEEEECcchhhhccCccc
Confidence 443 36899999999864 347899999999 79999998 888999999999999999999753 233221
Q ss_pred cccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEE-EeCC
Q 011801 243 FTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIV-YSFN 284 (477)
Q Consensus 243 ~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i-~~~~ 284 (477)
..+. . ..+.++++.|++|.+ +|++.|++ ..++
T Consensus 203 ~~~~--~------~~~~div~~S~hK~l--~g~~~~~~l~~~~ 235 (294)
T cd00615 203 PSSA--A------MAGADIVVQSTHKTL--PALTQGSMIHVKG 235 (294)
T ss_pred Ccch--h------hcCCcEEEEchhccc--chHhHHHHHHhCC
Confidence 1111 1 235678999999976 78886554 4433
No 217
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.85 E-value=1.6e-18 Score=175.77 Aligned_cols=292 Identities=14% Similarity=0.158 Sum_probs=174.3
Q ss_pred CcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEecc
Q 011801 87 GLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCD 166 (477)
Q Consensus 87 G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~ 166 (477)
-+.++++.+|++++ . ++.+++++|. .|+..+...+.++||.|++..-.|......++.. ....+.++
T Consensus 57 ~~~~~e~~la~~~~--------~-~~~l~~~sG~-~a~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~~-~~~~~~~~-- 123 (370)
T PRK05937 57 LLDDLEHKIAHFHG--------A-PEAFIVPSGY-MANLGLCAHLSSVTDYVLWDEQVHISVVYSLSVI-SGWHQSFR-- 123 (370)
T ss_pred HHHHHHHHHHHHhC--------C-CeEEEECChH-HHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHHc-CCceEEec--
Confidence 36899999999987 2 3346666666 5666666666678887777777776666666554 32333332
Q ss_pred CCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccH
Q 011801 167 ISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSV 246 (477)
Q Consensus 167 ~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~ 246 (477)
..|+++|++.+++..+...+..+|++++++|++|.+.+ +++|.++|+++|+++|+||+|+...+.. .....
T Consensus 124 -----~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~p---l~eI~~l~~~~~~~livDea~~~G~~g~-~g~g~ 194 (370)
T PRK05937 124 -----HNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLAP---LEQIIALSKKYHAHLIVDEAHAMGIFGD-DGKGF 194 (370)
T ss_pred -----CCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCC-CCCch
Confidence 24789999988754322224556778999999999999 7888888999999999999998433322 11111
Q ss_pred HHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhccc---CCCchHHHHHHHHhcCChhhHHHHHH
Q 011801 247 AEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSF---GLVSSQTQYLLASMLSDDEFVDNFLV 323 (477)
Q Consensus 247 ~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~~~---~~vs~~~q~~~~~~L~~~~~~~~~~~ 323 (477)
.... + ..+..+++.||||.+|..|. | +++.++..........++ ...++....++.+.++ ++++.-+
T Consensus 195 ~~~~---~-~~~~~~~~~tlsK~~g~~G~--~-vl~~~~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~---~l~~~~~ 264 (370)
T PRK05937 195 CHSL---G-YENFYAVLVTYSKALGSMGA--A-LLSSSEVKQDLMLNSPPLRYSTGLPPHLLISIQVAYD---FLSQEGE 264 (370)
T ss_pred HHhh---C-CCCCcEEEEechhhhhcCce--E-EEcCHHHHHHHHHhCCCCeecCCCCHHHHHHHHHHHH---HHHhCcH
Confidence 1111 1 11223568899999997773 3 344343322222122221 1234444333333332 1111112
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEE
Q 011801 324 ETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRV 403 (477)
Q Consensus 324 ~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl 403 (477)
..++++++.++++.+.|...+. ..... +.++.. .. .++.+ .+.+.||.+... +.+ ..+++|+
T Consensus 265 ~~~~~l~~l~~~l~~~l~~~~~-----~~~~~--i~~~~~------~~-~~~~~-~L~~~gi~v~~~--~~~-~~~~iRi 326 (370)
T PRK05937 265 LARKQLFRLKEYFAQKFSSAAP-----GCVQP--IFLPGI------SE-QELYS-KLVETGIRVGVV--CFP-TGPFLRV 326 (370)
T ss_pred HHHHHHHHHHHHHHHhcCCCCC-----CCEEE--EEeCCh------hH-HHHHH-HHHHCCeeEEee--CCC-CCCEEEE
Confidence 3355667777777777654221 01111 223321 11 13444 455669988632 222 3468999
Q ss_pred EeccC-CHHHHHHHHHHHHHHHhhhh
Q 011801 404 CFANM-DDDTLQVALNRIAAFVQQDK 428 (477)
Q Consensus 404 ~~~~~-~~e~l~~~l~~l~~~~~~~~ 428 (477)
+++.. ++++++.+++.|++++++..
T Consensus 327 s~~~~~t~edid~l~~~L~~~~~~~~ 352 (370)
T PRK05937 327 NLHAFNTEDEVDILVSVLATYLEKYQ 352 (370)
T ss_pred EcCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 99764 99999999999999987643
No 218
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.85 E-value=1e-18 Score=178.39 Aligned_cols=211 Identities=18% Similarity=0.207 Sum_probs=155.7
Q ss_pred CcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHH----HhhhCCcEEEE
Q 011801 87 GLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRD----LSWRTGVQIVP 162 (477)
Q Consensus 87 G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~----~~~~~g~~~~~ 162 (477)
-...|++.+|++.+ .+..+++++++.|+.+++.+++++||.|+++.++|.+.... +... |+++..
T Consensus 62 tv~~lE~~la~leg----------~~~av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~-Gi~v~~ 130 (432)
T PRK06702 62 TLAAFEQKLAELEG----------GVGAVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKL-GIDVTF 130 (432)
T ss_pred HHHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHC-CCEEEE
Confidence 36788999999876 24578899999999999999999999999999999866654 5555 999888
Q ss_pred EeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCC
Q 011801 163 VHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPK 242 (477)
Q Consensus 163 v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~ 242 (477)
+.. .+|++++++++++ ++|+|++.+|+||++.+.+ +++|+++|+++|+++|+|++|+. +.
T Consensus 131 vd~------~~d~~~l~~~I~~------~Tk~I~~e~pgnP~~~v~D---i~~I~~iA~~~gi~livD~T~~t-----P~ 190 (432)
T PRK06702 131 FNP------NLTADEIVALAND------KTKLVYAESLGNPAMNVLN---FKEFSDAAKELEVPFIVDNTLAT-----PY 190 (432)
T ss_pred ECC------CCCHHHHHHhCCc------CCeEEEEEcCCCccccccC---HHHHHHHHHHcCCEEEEECCCCc-----hh
Confidence 853 3688999998865 8999999999999999999 88899999999999999999852 11
Q ss_pred cccHHHhhhhccCCCCcEEEEecCCc-----ccCCCCceE-----EEEEeCCHHHHH-----------------------
Q 011801 243 FTSVAEVIQEMDCNRDLIHIIYSLSK-----DMGLPGFRV-----GIVYSFNDTVVN----------------------- 289 (477)
Q Consensus 243 ~~s~~~~~~~~~~~~~~viiv~SlSK-----~~g~~G~Rv-----G~i~~~~~~i~~----------------------- 289 (477)
+... + ..+..++++|+|| ..+++|.++ +|..+++..+..
T Consensus 191 ~~~p---l-----~~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (432)
T PRK06702 191 LCQA---F-----EHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKA 262 (432)
T ss_pred hCCh---h-----hcCCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHH
Confidence 1111 1 2345588999999 777888887 565543222211
Q ss_pred HHHHhcccC-CCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 011801 290 CGRKMSSFG-LVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV 343 (477)
Q Consensus 290 ~~~~~~~~~-~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~ 343 (477)
.......++ .++++..+++...|+.-+ .+.++..++...+.+.|+++
T Consensus 263 ~~~~~~~~g~~~sp~~a~l~~rgL~Tl~-------lR~~r~~~Na~~la~~L~~~ 310 (432)
T PRK06702 263 RVQLLRDYGNCMSPFNAYISNIGLETLH-------LRMERHSENALAVAKWLADH 310 (432)
T ss_pred HHHHHHHccCCCCHHHHHHHHhccCcHH-------HHHHHHHHHHHHHHHHHHhC
Confidence 111222333 467788888888887643 22333356677778888766
No 219
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.84 E-value=1.2e-18 Score=175.54 Aligned_cols=285 Identities=17% Similarity=0.209 Sum_probs=187.6
Q ss_pred CCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCCccchHHHHhhhCCcEEEEE
Q 011801 85 YHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCL-ANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPV 163 (477)
Q Consensus 85 ~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l-~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v 163 (477)
.....+++++++++++ .+++++++|+++|+..++.++ .++||.|+++.++|..+...+... |++++.+
T Consensus 17 ~~~~~~~~~~la~~~~----------~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~~~~~~-g~~~~~~ 85 (352)
T cd00616 17 GPKVREFEKAFAEYLG----------VKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATANAILLL-GATPVFV 85 (352)
T ss_pred CHHHHHHHHHHHHHhC----------CCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHHHc-CCeEEEE
Confidence 3457899999999986 246888889999999999998 589999999999999988888776 9999999
Q ss_pred eccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEeccccccc-ccCCCC
Q 011801 164 HCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAAT-VFSSPK 242 (477)
Q Consensus 164 ~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~-~~~~~~ 242 (477)
+++. +++.+|++++++++++ ++++|+++ ||+|...+ +++|.++|+++|+++|+|++++.. .+.+.
T Consensus 86 ~~~~-~~~~~d~~~l~~~i~~------~~~~v~~~---~~~G~~~~---~~~i~~l~~~~~i~li~D~a~~~g~~~~~~- 151 (352)
T cd00616 86 DIDP-DTYNIDPELIEAAITP------RTKAIIPV---HLYGNPAD---MDAIMAIAKRHGLPVIEDAAQALGATYKGR- 151 (352)
T ss_pred ecCC-CcCCcCHHHHHHhcCc------CCeEEEEE---CCCCCcCC---HHHHHHHHHHcCCeEEEECCCCCCCeECCE-
Confidence 9864 4688999999988743 78888877 46999887 777888899999999999999721 11111
Q ss_pred cccHHHhhhhccCCCCcEEEEecCC--cccCCCCceEEEEEeCCHHHHHHHHHhcccCC-----------------CchH
Q 011801 243 FTSVAEVIQEMDCNRDLIHIIYSLS--KDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGL-----------------VSSQ 303 (477)
Q Consensus 243 ~~s~~~~~~~~~~~~~~viiv~SlS--K~~g~~G~RvG~i~~~~~~i~~~~~~~~~~~~-----------------vs~~ 303 (477)
. .. . ...+.+.|++ |.++ +.+.|++++.++.+.+.++.....+. .+.+
T Consensus 152 --~----~~----~-~~d~~~~S~~~~K~~~--~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (352)
T cd00616 152 --K----VG----T-FGDAGAFSFHPTKNLT--TGEGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEI 218 (352)
T ss_pred --E----cc----c-CcceeEEcCCCCCCCc--ccCceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHH
Confidence 0 00 0 1124567776 8874 44578888877665554443321110 1112
Q ss_pred HHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEecCC-----ceEEEEeeccchhhccCchHHHHHHH
Q 011801 304 TQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLKSN-----AGLFFWMDLRHLLKEKTLEGEIALWR 377 (477)
Q Consensus 304 ~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~~~-----~g~~~~~~l~~~~~~~~~~~e~~l~~ 377 (477)
...+....+ ..+++..++.+++.+++.+.|.++ |+++..+. ....+.+.++.. .... -.++.+
T Consensus 219 ~aa~~~~~l-------~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~v~~ 287 (352)
T cd00616 219 QAAIGLAQL-------EKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPE---AGES-RDELIE 287 (352)
T ss_pred HHHHHHHHH-------HhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCc---CCCC-HHHHHH
Confidence 111111111 123445556677778888888885 77665322 123344444420 0001 113555
Q ss_pred HHHHhcCeEEeCCCCCCCC----------------C-------CCEEEEEeccC-CHHHHHHHHHHHH
Q 011801 378 TIVNDVKLNVSPGSSFQCT----------------E-------PGWFRVCFANM-DDDTLQVALNRIA 421 (477)
Q Consensus 378 ~ll~~~gI~v~pg~~f~~~----------------~-------~~~~Rl~~~~~-~~e~l~~~l~~l~ 421 (477)
.| .+.||.+.. .|.+. . .+.+|+++... ++++++.++++|+
T Consensus 288 ~L-~~~gI~~~~--~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 288 AL-KEAGIETRV--HYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred HH-HHCCCCeee--ecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 44 556996642 22111 0 15799999764 9999999988874
No 220
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=99.84 E-value=1.5e-18 Score=161.53 Aligned_cols=359 Identities=17% Similarity=0.221 Sum_probs=249.6
Q ss_pred CCCCCCCCccccccccccccc--cHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCC
Q 011801 30 PFHPTQNPGGVIQLGLAENQL--CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRV 107 (477)
Q Consensus 30 ~~~~~~~~~~~i~l~~~~n~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~ 107 (477)
.|+.+.+|.. ++|+.+--.. +-+.+...+++.+... ..+ -.--..|-|--|++.|+++.++.+-.... .
T Consensus 23 ~y~~d~~p~K-vnL~igAYRtd~g~PWvLPvVk~~e~~i--~~d----~s~NHEYLpi~Gl~~F~~~A~el~lg~~s--~ 93 (410)
T KOG1412|consen 23 SYGEDLDPVK-VNLGIGAYRTDDGKPWVLPVVKKAEKKI--AND----QSLNHEYLPILGLPTFTKAATELLLGADS--P 93 (410)
T ss_pred HhcccCCcce-eecccceEEcCCCCeeEehhhhhhhhhc--cCc----hhccchhccccCchhhhhhhHHHhcCCCc--h
Confidence 4777888877 7888764222 3344444444433210 000 01123588888999999999998642211 1
Q ss_pred ccCCCcE--EEeCChHHHHHHHHHHhc--CCCCeEEEcCCCccchHHHHhhhCC-cEEEEEeccCCCCcccCHHHHHHHH
Q 011801 108 TFDPDRI--VMGGGATGANELIMFCLA--NPGDAFLVPSPYYAAFDRDLSWRTG-VQIVPVHCDISNNFKITREALEAAY 182 (477)
Q Consensus 108 ~~~~~~i--~~t~G~t~al~~i~~~l~--~~Gd~vlv~~P~y~~~~~~~~~~~g-~~~~~v~~~~~~~f~i~~~~l~~~~ 182 (477)
.+..+++ +=+-++|+|+.+....|. -+..+|.+..|+|......++.. | ..+..+++=..++-.+|.+.+...+
T Consensus 94 a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if~~a-Gf~tv~~Y~yWd~~~k~~d~e~~Lsdl 172 (410)
T KOG1412|consen 94 AIKEDRVFGVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAIFEKA-GFTTVATYPYWDAENKCVDLEGFLSDL 172 (410)
T ss_pred hhhhccccceeeccccchhhhhHHHHHHhcccceeEecCCchhHHHHHHHHc-CCceeeeeeeecCCCceecHHHHHHHH
Confidence 1233443 236678999998876652 24567999999999988888876 8 4455555533456678999998888
Q ss_pred HHHHHhCCCeeEE-EEeCC-CCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCC--cccHHHhhhhccCCCC
Q 011801 183 ERAQEASINIKGL-IITNP-SNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPK--FTSVAEVIQEMDCNRD 258 (477)
Q Consensus 183 ~~~~~~~~~~k~v-ii~nP-~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~--~~s~~~~~~~~~~~~~ 258 (477)
+.+ ..+.| ++..+ |||||.-.++|+|+.|++..++++.+.+.|-+|.++.-+++. -+.+..+++ ...
T Consensus 173 ~~A-----Pe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~----~g~ 243 (410)
T KOG1412|consen 173 ESA-----PEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVE----QGF 243 (410)
T ss_pred hhC-----CCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHh----cCC
Confidence 875 33334 44433 999999999999999999999999999999999986444332 233333443 334
Q ss_pred cEEEEecCCcccCCCCceEEEE--EeCCHHHHHHH-HH-----hcccCCCchHHHHHHHHhcCChhhHHHHHH---HHHH
Q 011801 259 LIHIIYSLSKDMGLPGFRVGIV--YSFNDTVVNCG-RK-----MSSFGLVSSQTQYLLASMLSDDEFVDNFLV---ETSK 327 (477)
Q Consensus 259 ~viiv~SlSK~~g~~G~RvG~i--~~~~~~i~~~~-~~-----~~~~~~vs~~~q~~~~~~L~~~~~~~~~~~---~~~~ 327 (477)
-++++.||+|.||+.+-|+|-+ +..+..++... .+ ...+...+.....++...|+.+++.++|.+ .+..
T Consensus 244 e~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lre~W~~sik~Mss 323 (410)
T KOG1412|consen 244 ELFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELREQWIQSIKTMSS 323 (410)
T ss_pred eEEEEhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhccCCCcchhhHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 5788999999999999999975 45555443322 22 234444566778889999999887665544 4467
Q ss_pred HHHHHHHHHHHHHhhCC----CeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEE
Q 011801 328 RLAKRHHNFTKGLEQVG----INCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRV 403 (477)
Q Consensus 328 ~l~~r~~~l~~~L~~~g----i~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl 403 (477)
|+++.|..|.+.|..++ |.....+.|+|-+-.|.+ .-++.+.++++|.+.+- | |+
T Consensus 324 RI~~MR~aLrd~L~aL~TPGtWDHI~~QiGMFSyTGLtp-----------~qV~~li~~h~vyLl~~--------G--RI 382 (410)
T KOG1412|consen 324 RIKKMRTALRDHLVALKTPGTWDHITQQIGMFSYTGLTP-----------AQVDHLIENHKVYLLSD--------G--RI 382 (410)
T ss_pred HHHHHHHHHHHHHHhcCCCCcHHHHHhhccceeecCCCH-----------HHHHHHHHhceEEEecC--------C--cE
Confidence 88888899999998874 444556788998876663 24677888999988642 3 89
Q ss_pred EeccCCHHHHHHHHHHHHHHHhhhh
Q 011801 404 CFANMDDDTLQVALNRIAAFVQQDK 428 (477)
Q Consensus 404 ~~~~~~~e~l~~~l~~l~~~~~~~~ 428 (477)
+++.++...++...++|.+.++...
T Consensus 383 nisGLN~~NveyVAkAIde~Vr~~~ 407 (410)
T KOG1412|consen 383 NISGLNMKNVEYVAKAIDETVRAIK 407 (410)
T ss_pred eeeccccccHHHHHHHHHHHHHhhc
Confidence 9988888899999999999887643
No 221
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.84 E-value=2.4e-18 Score=179.78 Aligned_cols=310 Identities=15% Similarity=0.181 Sum_probs=195.5
Q ss_pred CCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHH--H-HhcCCCC----eEEEcCCCccchHHHHhhhCC
Q 011801 85 YHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIM--F-CLANPGD----AFLVPSPYYAAFDRDLSWRTG 157 (477)
Q Consensus 85 ~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~--~-~l~~~Gd----~vlv~~P~y~~~~~~~~~~~g 157 (477)
..|..+++.++++++.+..| .+...+..++|+++.+..++ + ++.++|| .|+++.|.|+.+...+... |
T Consensus 108 sqG~lel~~~~~~~la~l~G----~~~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~-G 182 (481)
T PRK04366 108 VQGALELMYELQEWLKEITG----MDAVTLQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTNPASAAMA-G 182 (481)
T ss_pred hhHHHHHHHHHHHHHHHHhC----CCceEEEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHhHHHHHHHc-C
Confidence 45888999999999998877 34445655677666655332 2 3456776 9999999999999888776 9
Q ss_pred cEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccc
Q 011801 158 VQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATV 237 (477)
Q Consensus 158 ~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~ 237 (477)
++++.++++ .+|.+|+++|++++.+ ++++|++++|+ |||.+ .+++++|+++|+++|+++|+|.++....
T Consensus 183 ~~vv~v~~~--~~~~~D~e~L~~~i~~------~t~~V~v~~Pn-~tG~~--~~dl~eI~~~a~~~gal~iVD~a~~~~~ 251 (481)
T PRK04366 183 FKVVEIPSN--EDGLVDLEALKAAVGE------DTAALMLTNPN-TLGLF--ERNILEIAEIVHEAGGLLYYDGANLNAI 251 (481)
T ss_pred CEEEEeecC--CCCCcCHHHHHhhccc------CCeEEEEeCCC-Ccccc--chHHHHHHHHHHHcCCEEEEEecChhhh
Confidence 999999985 3578999999988854 78899999997 99964 3469999999999999999999985221
Q ss_pred cCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCC----CceEEEEEeCCHHHHHHHHHh------cccC---------
Q 011801 238 FSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLP----GFRVGIVYSFNDTVVNCGRKM------SSFG--------- 298 (477)
Q Consensus 238 ~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~----G~RvG~i~~~~~~i~~~~~~~------~~~~--------- 298 (477)
... .+.. ..+..++++|.+|.||.| |..+|++++.++.+. .+.-. ..+.
T Consensus 252 ~g~---~~~~--------~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~-~lp~~~v~~~g~~~~l~~~r~~~i 319 (481)
T PRK04366 252 LGK---ARPG--------DMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELAP-FLPVPVVEKDGDRYRLDYDRPKSI 319 (481)
T ss_pred ccc---CCcc--------ccCCCEEEEechhhcCCCCCCCCCCeeeeeehhhhHh-hCCCCeeeccCCceeecccccccC
Confidence 111 1111 224568889999998754 456888888554332 22100 0000
Q ss_pred ------CCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCce-EEEEeeccchhhccCchH
Q 011801 299 ------LVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAG-LFFWMDLRHLLKEKTLEG 371 (477)
Q Consensus 299 ------~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g-~~~~~~l~~~~~~~~~~~ 371 (477)
..+.....++..++..-. .+-+++..++..++.+++.++|.+. +++.-.... .-+.++.+.. ......
T Consensus 320 ~r~~a~t~~~l~~~~a~~~l~~~G--~~Gl~~~a~~~~~~a~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~-~~~g~~- 394 (481)
T PRK04366 320 GRVRAFYGNFGVLVRAYAYIRSLG--AEGLREVSEDAVLNANYLKARLKDI-YDLPYDRPCMHEFVLSGKKL-KETGVR- 394 (481)
T ss_pred CCcccccCchHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhHhh-CcccCCCCeeEEEEEECccc-cccCCC-
Confidence 000111111222222111 1224455566666778888888875 322211111 1123333311 111111
Q ss_pred HHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccC-CHHHHHHHHHHHHHHHhhhhc
Q 011801 372 EIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANM-DDDTLQVALNRIAAFVQQDKE 429 (477)
Q Consensus 372 e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~~~~~ 429 (477)
..++.+.+. +.||.+. +..+.....+.+|+|+... +++++|.+++.|+++.++..+
T Consensus 395 ~~~v~~~L~-~~Gi~~~-~~~~p~~~~~~l~is~~e~~t~edid~l~~~l~~i~~~~~~ 451 (481)
T PRK04366 395 TLDIAKRLL-DYGFHPP-TIYFPLIVPEALMIEPTETESKETLDAFIAAMKQIAEEAKE 451 (481)
T ss_pred HHHHHHHHH-HCCccCC-ccccccccCCeEEEcccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 124666665 4599864 2222212256899999765 899999999999999876443
No 222
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.84 E-value=3e-18 Score=175.86 Aligned_cols=158 Identities=20% Similarity=0.228 Sum_probs=123.4
Q ss_pred CcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhh---CCcEEEEE
Q 011801 87 GLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWR---TGVQIVPV 163 (477)
Q Consensus 87 G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~---~g~~~~~v 163 (477)
...+|++++|++.+ .+..++++++++|+.+++..++++||.|+++.|.|++....+... .|+++..+
T Consensus 59 t~~~Le~~lA~l~g----------~~~~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~ 128 (425)
T PRK06084 59 TNDVLEQRVAALEG----------GVGALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFA 128 (425)
T ss_pred hHHHHHHHHHHHhC----------CCceeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEE
Confidence 35789999999976 234667788889999999999999999999999998655544321 26666555
Q ss_pred eccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCc
Q 011801 164 HCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKF 243 (477)
Q Consensus 164 ~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~ 243 (477)
+. .|++++++++++ ++++|++++|+||||.+++ +++|.++|+++|++||+|++|+.... .
T Consensus 129 d~-------~d~e~le~ai~~------~tklV~lesp~NPtG~v~d---l~~I~~la~~~~i~vVvD~a~a~~~~-~--- 188 (425)
T PRK06084 129 AH-------DDIAALEALIDE------RTKAVFCESIGNPAGNIID---IQALADAAHRHGVPLIVDNTVATPVL-C--- 188 (425)
T ss_pred CC-------CCHHHHHHHhcc------CCcEEEEeCCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc-C---
Confidence 42 378999988864 7899999999999999999 78888999999999999999973211 1
Q ss_pred ccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeC
Q 011801 244 TSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSF 283 (477)
Q Consensus 244 ~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~ 283 (477)
.++ ..+..+++.|++|.+|.+|.++|.+++.
T Consensus 189 ~p~---------~~gaDivv~S~tK~l~G~g~~~gG~v~~ 219 (425)
T PRK06084 189 RPF---------EHGADIVVHSLTKYIGGHGTSIGGIVVD 219 (425)
T ss_pred Chh---------hcCCCEEEECchhcccccccceeEEEEe
Confidence 111 1234488999999999899999987764
No 223
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.84 E-value=1.8e-18 Score=174.95 Aligned_cols=208 Identities=16% Similarity=0.127 Sum_probs=148.2
Q ss_pred HHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHH----hhhCCcEEEEEe
Q 011801 89 PEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDL----SWRTGVQIVPVH 164 (477)
Q Consensus 89 ~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~----~~~~g~~~~~v~ 164 (477)
..|++++|++.+ .+++++++|+++|+..++.+++++||.|++++|.|++....+ +.. |+++..++
T Consensus 53 ~~lE~~lA~l~g----------~~~~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~-gi~v~~~d 121 (377)
T TIGR01324 53 FALQDAMCELEG----------GAGCYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRM-GVDITYYD 121 (377)
T ss_pred HHHHHHHHHHhC----------CCcEEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhc-CcEEEEEC
Confidence 599999999976 357999999999999999999999999999999998765432 333 78776664
Q ss_pred ccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcc
Q 011801 165 CDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFT 244 (477)
Q Consensus 165 ~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~ 244 (477)
.. +.+++++++++ ++|+|++++|+||+|...+ +++|+++|+++|+++|+|++|+...+. .
T Consensus 122 ~~-------~~e~l~~~i~~------~tklV~lesp~Np~g~~~d---l~~I~~la~~~g~~livD~t~a~g~~~-~--- 181 (377)
T TIGR01324 122 PL-------IGEDIATLIQP------NTKVLFLEAPSSITFEIQD---IPAIAKAARNPGIVIMIDNTWAAGLLF-K--- 181 (377)
T ss_pred CC-------CHHHHHHhcCC------CceEEEEECCCCCCCcHHH---HHHHHHHHHHcCCEEEEECCCcccccc-C---
Confidence 21 22677777653 7999999999999988866 999999999999999999999743221 1
Q ss_pred cHHHhhhhccCCCCcEEEEecCCcccC-CCCceEEEEEeCCHHHHHHHHHhcccCC-CchHHHHHHHHhcCChhhHHHHH
Q 011801 245 SVAEVIQEMDCNRDLIHIIYSLSKDMG-LPGFRVGIVYSFNDTVVNCGRKMSSFGL-VSSQTQYLLASMLSDDEFVDNFL 322 (477)
Q Consensus 245 s~~~~~~~~~~~~~~viiv~SlSK~~g-~~G~RvG~i~~~~~~i~~~~~~~~~~~~-vs~~~q~~~~~~L~~~~~~~~~~ 322 (477)
+ + ..+..++++|++|.+| .++...|+++++++.+.........++. +++...+.+..-++. +
T Consensus 182 p---l------~~gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~~~l~~~~~~~G~~l~p~~a~~~~rgl~t-------l 245 (377)
T TIGR01324 182 P---L------EHGVDISIQAGTKYLVGHSDIMIGTVVANARTWDQLREHSYLMGQMVDADDAYTTLRGLRT-------L 245 (377)
T ss_pred c---c------ccCceEEEecCceeccCCCCceEEEEEeCHHHHHHHHHHHHHhCCCCCHHHHHHHHhhhhh-------H
Confidence 1 1 2345688999999996 3457789888866544333323334443 455544455444443 2
Q ss_pred HHHHHHHHHHHHHHHHHHhhC
Q 011801 323 VETSKRLAKRHHNFTKGLEQV 343 (477)
Q Consensus 323 ~~~~~~l~~r~~~l~~~L~~~ 343 (477)
..+.++..++...+.+.|++.
T Consensus 246 ~~R~~~~~~~a~~la~~L~~~ 266 (377)
T TIGR01324 246 GVRLKQHQESSLAIAKWLSEQ 266 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHhC
Confidence 333445555656677777765
No 224
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.84 E-value=1.3e-18 Score=176.83 Aligned_cols=171 Identities=22% Similarity=0.300 Sum_probs=134.1
Q ss_pred CcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCCccchHHHHhhhCCcEEEEEec
Q 011801 87 GLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCL-ANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHC 165 (477)
Q Consensus 87 G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l-~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~ 165 (477)
...+|++++|++++ .+++++++|+|+|+.+++.++ +++||.|+++.|+|..+...+... |++++.+++
T Consensus 34 ~~~~le~~la~~~g----------~~~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~~~~~~~~~~~-G~~~v~vd~ 102 (379)
T PRK11658 34 KNQALEQAFCQLTG----------NQHAIAVSSATAGMHITLMALGIGPGDEVITPSLTWVSTLNMIVLL-GATPVMVDV 102 (379)
T ss_pred hHHHHHHHHHHHhC----------CCeEEEECCHHHHHHHHHHHcCCCCCCEEEECCCcHHHHHHHHHHc-CCEEEEEec
Confidence 47999999999997 246888999999999999998 799999999999999998887776 999999998
Q ss_pred cCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccc-cccCCCCcc
Q 011801 166 DISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAA-TVFSSPKFT 244 (477)
Q Consensus 166 ~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~-~~~~~~~~~ 244 (477)
+. ++|.+|++++++++.+ ++|+|+ |+||+|...+ +++|.++|+++|++||+|++++. ..+.+.. .
T Consensus 103 ~~-~~~~~d~~~l~~~i~~------~tkav~---~~~~~G~~~d---~~~i~~~a~~~gi~vi~D~a~a~g~~~~~~~-~ 168 (379)
T PRK11658 103 DR-DTLMVTPEAIEAAITP------RTKAII---PVHYAGAPAD---LDAIRAIGERYGIPVIEDAAHAVGTYYKGRH-I 168 (379)
T ss_pred CC-CcCCcCHHHHHHhccc------CCeEEE---EeCCCCCcCC---HHHHHHHHHHcCCeEEEECCCccCCeECCee-c
Confidence 74 4678999999998864 788876 5677999887 77888999999999999999972 2232211 1
Q ss_pred cHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHh
Q 011801 245 SVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKM 294 (477)
Q Consensus 245 s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~ 294 (477)
. ..+. .+.||++.-.+++.+.|+++.+++.+.+.++.+
T Consensus 169 ------g----~~g~--~~~Sf~~~K~l~~g~GG~v~~~~~~~~~~~~~~ 206 (379)
T PRK11658 169 ------G----ARGT--AIFSFHAIKNITCAEGGLVVTDDDELADRLRSL 206 (379)
T ss_pred ------C----CCCC--EEEeCCCCCcCcccCceEEEECCHHHHHHHHHH
Confidence 1 1122 356776555557778899998777766655544
No 225
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.84 E-value=3.7e-18 Score=173.07 Aligned_cols=215 Identities=18% Similarity=0.199 Sum_probs=142.3
Q ss_pred cccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHH----Hhhh
Q 011801 80 AIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRD----LSWR 155 (477)
Q Consensus 80 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~----~~~~ 155 (477)
.+|+.+ -...|++++|++.+. ...+++++| +.|+.+++ .+++|||+|++++|.|++.... +...
T Consensus 45 ~r~~~p-~~~~Le~~la~l~g~---------~~al~~~SG-~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~ 112 (380)
T PRK06176 45 SRSGNP-TRFALEELIADLEGG---------VKGFAFASG-LAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFDKVLVKN 112 (380)
T ss_pred cCCCCh-hHHHHHHHHHHHhCC---------CCEEEECCH-HHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHHHHHHhc
Confidence 344433 267899999998761 234555555 66888766 4679999999999999865432 3334
Q ss_pred CCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccc
Q 011801 156 TGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAA 235 (477)
Q Consensus 156 ~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~ 235 (477)
|+++..++. .|++++++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+.
T Consensus 113 -gi~v~~vd~-------~d~e~l~~ai~~------~t~lV~lesP~Nptg~~~d---i~~I~~la~~~gi~vivD~t~a~ 175 (380)
T PRK06176 113 -GLSCTIIDT-------SDLSQIKKAIKP------NTKALYLETPSNPLLKITD---LAQCASVAKDHGLLTIVDNTFAT 175 (380)
T ss_pred -CeEEEEcCC-------CCHHHHHHhcCc------CceEEEEECCCCCCceecC---HHHHHHHHHHcCCEEEEECCccc
Confidence 888776653 268888888754 7899999999999999998 77888899999999999999985
Q ss_pred cccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCC-ceEEEEEeCCHHHHHHHHHhccc-C-CCchHHHHHHHHhc
Q 011801 236 TVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPG-FRVGIVYSFNDTVVNCGRKMSSF-G-LVSSQTQYLLASML 312 (477)
Q Consensus 236 ~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G-~RvG~i~~~~~~i~~~~~~~~~~-~-~vs~~~q~~~~~~L 312 (477)
..+.. + + ..+..+++.|++|.++-+| .-.|++++.++.+...++.++.. + ..++...+.+..-+
T Consensus 176 ~~~~~-p---~---------~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~~~l~~~gl 242 (380)
T PRK06176 176 PYYQN-P---L---------LLGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVLGPQDSWLLQRGI 242 (380)
T ss_pred cccCC-c---c---------ccCCCEEEecCceeccCCccceeeEEEecHHHHHHHHHHHHHHhcCCCCHHHHHHHHhcc
Confidence 43321 1 1 1133478899999997555 45677777666665555443333 2 23555555554444
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 011801 313 SDDEFVDNFLVETSKRLAKRHHNFTKGLEQV 343 (477)
Q Consensus 313 ~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~ 343 (477)
..-. .+.++..+....+.+.|++.
T Consensus 243 ~tl~-------~R~~~~~~~a~~la~~L~~~ 266 (380)
T PRK06176 243 KTLG-------LRMEAHQKNALCVAEFLEKH 266 (380)
T ss_pred CcHH-------HHHHHHHHHHHHHHHHHHhC
Confidence 3322 22223334445555666554
No 226
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.84 E-value=2.5e-18 Score=177.03 Aligned_cols=293 Identities=11% Similarity=0.066 Sum_probs=174.3
Q ss_pred CcEEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCccchHHHHhhhCC--------c-----EEEEEeccC--CC-----
Q 011801 112 DRIVMGGGATGANELIMFCLA--NPGDAFLVPSPYYAAFDRDLSWRTG--------V-----QIVPVHCDI--SN----- 169 (477)
Q Consensus 112 ~~i~~t~G~t~al~~i~~~l~--~~Gd~vlv~~P~y~~~~~~~~~~~g--------~-----~~~~v~~~~--~~----- 169 (477)
+++++++++++|++.+++.-. ....+|+...-+|++....+...++ . .+..++... .+
T Consensus 95 ~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (420)
T TIGR00700 95 KKSVFFNSGAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDK 174 (420)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCcccccccccc
Confidence 689999999999999887531 2235688888888876533222111 1 112222210 00
Q ss_pred --CcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCC-HHHHHHHHHHHHhcCeEEEecccccccccCCCCcccH
Q 011801 170 --NFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLD-RDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSV 246 (477)
Q Consensus 170 --~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~-~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~ 246 (477)
.+.-+++++++.+... ....++.+|++.--..-+|.+++ .+.+++|.++|++||+++|+||+|.++.+.+. +.+.
T Consensus 175 ~~~~~~~~~~~~~~~~~~-~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~-~~a~ 252 (420)
T TIGR00700 175 QLSTDGELAAARAIFVID-VGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGA-MFAC 252 (420)
T ss_pred chhHHHHHHHHHHHHHhh-cCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccch-hHHH
Confidence 0011134555554311 12346777766533556787664 45599999999999999999999998766553 2222
Q ss_pred HHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHH--HhcccCCCchHHHHHHHHhcC---ChhhHHHH
Q 011801 247 AEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGR--KMSSFGLVSSQTQYLLASMLS---DDEFVDNF 321 (477)
Q Consensus 247 ~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~--~~~~~~~vs~~~q~~~~~~L~---~~~~~~~~ 321 (477)
... +..++ +.+|||.++ +|+|+||++++++ +.+... ...+....++++|.++.+.|+ +.++ .+.
T Consensus 253 ~~~----~~~pD----i~~lsK~l~-~G~pig~v~~~~~-i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~~-~~~ 321 (420)
T TIGR00700 253 EHE----GPEPD----LITTAKSLA-DGLPLSGVTGRAE-IMDAPAPGGLGGTYAGNPLACAAALAVLAIIESEGL-IER 321 (420)
T ss_pred hhc----CCCCC----EEEeecccc-CCcceEEEEecHH-HHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHHhccH-HHH
Confidence 211 11223 346999999 9999999999654 444332 122222367888888755553 3333 333
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchhh-ccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCE
Q 011801 322 LVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLK-EKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGW 400 (477)
Q Consensus 322 ~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~-~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~ 400 (477)
+.+..++++++.+.+.+.+. .+....+. |+++|+.+..... .........+...+ .+.||.+.|++.|+ ++
T Consensus 322 ~~~~g~~l~~~L~~l~~~~~--~~~~vrg~-G~~~~i~~~~~~~~~~~~~~~~~l~~~~-~~~Gv~i~p~~~f~----~~ 393 (420)
T TIGR00700 322 ARQIGRLVTDRLTTLKAVDP--RIGDVRGL-GAMIAVELVDPGTTEPDAGLAERIATAA-HAAGLLLLTCGMFG----NI 393 (420)
T ss_pred HHHHHHHHHHHHHHHHhhCC--CEEEeecc-ceEEEEEEecCCCCCccHHHHHHHHHHH-HHCCeEEeccCCCC----CE
Confidence 44444444444333333221 23334444 7888998742100 00111112344444 45699999987773 68
Q ss_pred EEEEecc-CCHHHHHHHHHHHHHHHh
Q 011801 401 FRVCFAN-MDDDTLQVALNRIAAFVQ 425 (477)
Q Consensus 401 ~Rl~~~~-~~~e~l~~~l~~l~~~~~ 425 (477)
+|++++. ++++++++++++|.+++.
T Consensus 394 lRl~p~l~~~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 394 IRFLPPLTIGDELLSEGLDILCAILA 419 (420)
T ss_pred EEEECCCCcCHHHHHHHHHHHHHHhh
Confidence 9999976 599999999999999874
No 227
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.83 E-value=8e-19 Score=178.27 Aligned_cols=172 Identities=16% Similarity=0.315 Sum_probs=127.7
Q ss_pred HHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccC
Q 011801 89 PEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCL-ANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDI 167 (477)
Q Consensus 89 ~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l-~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~ 167 (477)
.++++++++++.+..| .+++++++|+++|+.+++..+ .++||.|+++.|+|+.+...+... |++++.++++.
T Consensus 30 ~~~~~~~e~~la~~~g------~~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~~~~~~~~~~-G~~~v~~d~d~ 102 (375)
T PRK11706 30 GGFTRRCQQWLEQRFG------SAKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAFVLR-GAKIVFVDIRP 102 (375)
T ss_pred CHHHHHHHHHHHHHhC------CCeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHc-CCEEEEEecCC
Confidence 4566666666655433 468999999999999887765 689999999999999999888877 99999999875
Q ss_pred CCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccc-cCCCCcccH
Q 011801 168 SNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATV-FSSPKFTSV 246 (477)
Q Consensus 168 ~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~-~~~~~~~s~ 246 (477)
++|.+|++++++++.+ ++|+|+++ |++|...+ +++|+++|+++|++||+|++|+... +++.+ +
T Consensus 103 -~~~~~d~~~le~~i~~------~tk~i~~~---~~~G~~~~---~~~i~~la~~~~i~vIeD~a~a~g~~~~~~~---~ 166 (375)
T PRK11706 103 -DTMNIDETLIEAAITP------KTRAIVPV---HYAGVACE---MDTIMALAKKHNLFVVEDAAQGVMSTYKGRA---L 166 (375)
T ss_pred -CcCCcCHHHHHHhcCC------CCeEEEEe---CCCCCccC---HHHHHHHHHHcCCEEEEECccccccccCCee---e
Confidence 4588999999998854 78888876 46998877 6788888999999999999998432 22221 1
Q ss_pred HHhhhhccCCCCcEEEEecCC--cccCCCCceEEEEEeCCHHHHHHHHHh
Q 011801 247 AEVIQEMDCNRDLIHIIYSLS--KDMGLPGFRVGIVYSFNDTVVNCGRKM 294 (477)
Q Consensus 247 ~~~~~~~~~~~~~viiv~SlS--K~~g~~G~RvG~i~~~~~~i~~~~~~~ 294 (477)
..+ . .+.+.||+ |.++ +|.+.++++. ++.+.+.++.+
T Consensus 167 g~~--------~-~~~~~Sf~~~K~l~-~g~gG~~~~~-~~~~~~~~~~~ 205 (375)
T PRK11706 167 GTI--------G-HIGCFSFHETKNYT-AGEGGALLIN-DPALIERAEII 205 (375)
T ss_pred ecC--------c-CEEEEeCCCCcccc-ccCCeEEEEC-CHHHHHHHHHH
Confidence 111 1 13344554 9997 6877666665 55555544433
No 228
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.83 E-value=4.9e-18 Score=170.97 Aligned_cols=320 Identities=17% Similarity=0.245 Sum_probs=217.7
Q ss_pred ccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHH-HhhhCCcE
Q 011801 81 IFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRD-LSWRTGVQ 159 (477)
Q Consensus 81 ~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~-~~~~~g~~ 159 (477)
.|.......+|.++++++++ .+.++.+++++.|+++++.++++|||.| +.++|...... +.+. |..
T Consensus 66 ~yag~~s~~~lE~~va~~~G----------~~~av~v~sGT~Al~ll~~l~l~pGDeV--psn~~f~Tt~ahIe~~-Gav 132 (450)
T TIGR02618 66 AYAGSRNFYHLERTVRELYG----------FKYVVPTHQGRGAENLLSQIAIKPGDYV--PGNMYFTTTRYHQEKN-GAT 132 (450)
T ss_pred hhcCCCcHHHHHHHHHHHHC----------CCeEEEcCCHHHHHHHHHHhCCCCcCEE--CCceeHHHHHHHHHhC-CeE
Confidence 48777778999999999997 4579999999999998877788999976 77777444444 5655 886
Q ss_pred EEEEeccC--------CCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCC-cccCCCHHHHHHHHHHHHhcCeEEEec
Q 011801 160 IVPVHCDI--------SNNFKITREALEAAYERAQEASINIKGLIITNPSNP-LGTTLDRDTLKSLVSFINDKNIHLVCD 230 (477)
Q Consensus 160 ~~~v~~~~--------~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NP-tG~~~~~~~l~~l~~~~~~~~~~lI~D 230 (477)
++.++.++ ..++.+|+++|++++++. ...++++|.+.+++|- .|..++.++++++.++|+++|+.||+|
T Consensus 133 ~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~--~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~D 210 (450)
T TIGR02618 133 FVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEV--GADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYD 210 (450)
T ss_pred EEeeecccccccccCCCCCCCcCHHHHHHHhccc--cCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEE
Confidence 66664431 235788999999999742 1125667888999885 589999999999999999999999999
Q ss_pred ccccc--ccc-----CCCCcccHHHhhhhccCCCCcEEEEecCCcccCCC-CceEEEEEeCCHHHHHHHHHh-------c
Q 011801 231 EIYAA--TVF-----SSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLP-GFRVGIVYSFNDTVVNCGRKM-------S 295 (477)
Q Consensus 231 e~y~~--~~~-----~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~-G~RvG~i~~~~~~i~~~~~~~-------~ 295 (477)
.+... -.| .+-.-.++.+++.+. ..-...++.|..|+.+.| | |+|...++.+.+.++.. .
T Consensus 211 aAR~~gNA~~I~~re~g~~~~~i~ei~~e~--~~~aD~~~~S~~Kd~~~~~G---G~l~~~d~~l~~k~r~~~~~~eG~~ 285 (450)
T TIGR02618 211 ATRCVENAYFIKEREQGYEDKSIAEILKEM--MSYADGCTMSGKKDCLVNIG---GFLCMNDDEMFQSAKELVVVFEGMP 285 (450)
T ss_pred ccchhhChhhhhcccccccCCCHHHHHHHH--hccCcEEEEeeccCCCCCCc---eEEEeCCHHHHHHHHHHhhhcCCcc
Confidence 98863 111 011224665555443 112224778999999877 4 67776777776666544 1
Q ss_pred ccCCCchHHHHHHHHhcCChhhHH-HHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchh---hccCchH
Q 011801 296 SFGLVSSQTQYLLASMLSDDEFVD-NFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLL---KEKTLEG 371 (477)
Q Consensus 296 ~~~~vs~~~q~~~~~~L~~~~~~~-~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~---~~~~~~~ 371 (477)
+++..+.-...+++..|... ++ .++.. + ....++|.+.|.+.|+++..|.+|.-++++....+ ....+..
T Consensus 286 tyGgla~r~~~ala~gL~e~--~~~~y~~~---r-~~~a~~La~~L~~~Gvpv~~p~ggh~V~vda~~~lph~~~~~~p~ 359 (450)
T TIGR02618 286 SYGGLAGRDMEAMAIGIREA--VDYEYIEH---R-VKQVRYLGDKLKAAGVPIVEPVGGHAVFLDARRFLPHIPQDQFPA 359 (450)
T ss_pred ccCchhhhhHHHHHHHHHHh--hhHHHHHH---H-HHHHHHHHHHHHHCCCcccCCCCcceEEEEhHHhCCCCChhhChH
Confidence 23333333333333333321 11 11221 1 12357889999999999988888899999886542 2223333
Q ss_pred HHHHHHHHHHhcCeEEeC-CCCCCCC--------CC--CEEEEEecc--CCHHHHHHHHHHHHHHHhhh
Q 011801 372 EIALWRTIVNDVKLNVSP-GSSFQCT--------EP--GWFRVCFAN--MDDDTLQVALNRIAAFVQQD 427 (477)
Q Consensus 372 e~~l~~~ll~~~gI~v~p-g~~f~~~--------~~--~~~Rl~~~~--~~~e~l~~~l~~l~~~~~~~ 427 (477)
..+...|..+.||.-.- |+..... .+ ..+|+.+.. .|.++++...++|..+.++.
T Consensus 360 -~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~ 427 (450)
T TIGR02618 360 -QSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKHR 427 (450)
T ss_pred -HHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHHHhhH
Confidence 36777788888997433 3332111 11 479999966 38999999999999999873
No 229
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.83 E-value=6.2e-18 Score=175.58 Aligned_cols=360 Identities=13% Similarity=0.093 Sum_probs=199.1
Q ss_pred CCCCCCCccccccccc--cccc--cHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCC
Q 011801 31 FHPTQNPGGVIQLGLA--ENQL--CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGR 106 (477)
Q Consensus 31 ~~~~~~~~~~i~l~~~--~n~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~ 106 (477)
|..+.+.+..||+..+ ...+ ..+.+.+.+++.-+ .........-..+.+..+|+.+.+..+.
T Consensus 47 ~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~-------------~~~~~~~~~~~~~~~~~la~~L~~~~p~- 112 (451)
T PRK06918 47 LVTDVDGNQYIDFAGAIGTINVGHSHPKVKEALHKQVD-------------QYIHTGFNVMMYEPYIELAEKLAALAPG- 112 (451)
T ss_pred EEEeCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHH-------------hccCccccccccHHHHHHHHHHHHhCCC-
Confidence 3334455667887544 2333 34566666655311 1111110001134455555555443210
Q ss_pred CccCCCcEEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCccchHHHHhhhCCc-------------EEEEEeccC--CC
Q 011801 107 VTFDPDRIVMGGGATGANELIMFCLA--NPGDAFLVPSPYYAAFDRDLSWRTGV-------------QIVPVHCDI--SN 169 (477)
Q Consensus 107 ~~~~~~~i~~t~G~t~al~~i~~~l~--~~Gd~vlv~~P~y~~~~~~~~~~~g~-------------~~~~v~~~~--~~ 169 (477)
-..+.+++++++++|++.+++.-. .....|+....+|++....+...++. .+..+|... ..
T Consensus 113 --~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (451)
T PRK06918 113 --SFDKKVLFLNSGAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRR 190 (451)
T ss_pred --CCCCEEEEcCCcHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccc
Confidence 011589999999999999987632 22356888888888765432221121 012222110 00
Q ss_pred CcccCH--------HHHHHHHHHHHHhCCCeeEEEEeCCCCCc-ccCC-CHHHHHHHHHHHHhcCeEEEecccccccccC
Q 011801 170 NFKITR--------EALEAAYERAQEASINIKGLIITNPSNPL-GTTL-DRDTLKSLVSFINDKNIHLVCDEIYAATVFS 239 (477)
Q Consensus 170 ~f~i~~--------~~l~~~~~~~~~~~~~~k~vii~nP~NPt-G~~~-~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~ 239 (477)
...+.. +.+++.++.. ....++.+ +|..|-+.. |.++ +.+.+++|.++|+++|+++|+||+|.++.+.
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~iAa-vi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~ 268 (451)
T PRK06918 191 PEGLTEEQYDDFMIEEFKNFFISE-VAPETIAA-VVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFART 268 (451)
T ss_pred cccCchHHHHHHHHHHHHHHHHhh-cCCCceEE-EEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCcc
Confidence 011111 1233322111 01234555 555675544 6545 5556999999999999999999999987665
Q ss_pred CCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHh--cccCCCchHHHHHHHHhcC---C
Q 011801 240 SPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKM--SSFGLVSSQTQYLLASMLS---D 314 (477)
Q Consensus 240 ~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~--~~~~~vs~~~q~~~~~~L~---~ 314 (477)
+.. .+...+ . ..++ +.||||.++ +|+|+||++++++ +.+.+... ..-...++++|.++.+.|+ +
T Consensus 269 g~~-~a~~~~-~---v~pD----i~t~sK~l~-~G~pig~v~~~~~-i~~~~~~~~~~~T~~g~~l~~aaa~a~l~~i~~ 337 (451)
T PRK06918 269 GKY-FAIEHF-D---VVPD----LITVSKSLG-AGVPISGVIGRKE-IMDESAPGELGGTYAGSPLGCAAALAVLDIIEK 337 (451)
T ss_pred Cce-ehhHhc-C---CCCC----EEeeehhhc-CCCccEEEEEcHH-HHhccCCCCcCcCCCcCHHHHHHHHHHHHHHHH
Confidence 543 333322 1 1233 448999999 9999999999655 43333221 1122367788888555553 3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhCC-CeEecCCceEEEEeeccchh-hccCchHHHHHHHHHHHhcCeEEeCCCC
Q 011801 315 DEFVDNFLVETSKRLAKRHHNFTKGLEQVG-INCLKSNAGLFFWMDLRHLL-KEKTLEGEIALWRTIVNDVKLNVSPGSS 392 (477)
Q Consensus 315 ~~~~~~~~~~~~~~l~~r~~~l~~~L~~~g-i~~~~~~~g~~~~~~l~~~~-~~~~~~~e~~l~~~ll~~~gI~v~pg~~ 392 (477)
+++ .+++++..+++.++.+.+.+ +.+ +....+.++++.|....+.. ..........+.+.+ .++||.+.|+..
T Consensus 338 ~~~-~~~~~~~g~~l~~~l~~l~~---~~~~~~~vrg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~Gvlv~~~~~ 412 (451)
T PRK06918 338 ENL-NDRAIELGKVVMNRFEEMKN---KYNCIGDVRGLGAMCAFELVQDRKTKEPDKTLTANICKEA-NKRGLLLLSAGT 412 (451)
T ss_pred CCH-HHHHHHHHHHHHHHHHHHHh---hCCCceeeccceeEEEEEEccCCCcCCCcHHHHHHHHHHH-HHCCeEEeecCC
Confidence 333 34455555555554444333 222 23344567676665542110 000111112344444 456999999866
Q ss_pred CCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHhhhh
Q 011801 393 FQCTEPGWFRVCFAN-MDDDTLQVALNRIAAFVQQDK 428 (477)
Q Consensus 393 f~~~~~~~~Rl~~~~-~~~e~l~~~l~~l~~~~~~~~ 428 (477)
|+ +++|++++. ++++++++++++|.+++++..
T Consensus 413 ~~----~~lrl~p~l~~t~~~id~~l~~l~~~l~~~~ 445 (451)
T PRK06918 413 YG----NVIRVLMPLVITDEQLEEGLTIIEESLQACY 445 (451)
T ss_pred CC----CEEEEECCCccCHHHHHHHHHHHHHHHHHHH
Confidence 63 689999976 699999999999999997643
No 230
>PLN02509 cystathionine beta-lyase
Probab=99.83 E-value=3.5e-18 Score=176.01 Aligned_cols=217 Identities=15% Similarity=0.167 Sum_probs=147.8
Q ss_pred ccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHH----hhhC
Q 011801 81 IFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDL----SWRT 156 (477)
Q Consensus 81 ~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~----~~~~ 156 (477)
.|... |.+ .++++.+++.+..+ .+..++++|+++|+.+++ .++++||.|+++.|.|+++...+ ...
T Consensus 126 ~Y~r~-gnp-t~~aLE~~lA~leg------~e~ai~~~SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~- 195 (464)
T PLN02509 126 DYTRS-GNP-TRDALESLLAKLDK------ADRAFCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVPRS- 195 (464)
T ss_pred ccCCC-CCH-HHHHHHHHHHHHhC------CCEEEEeCcHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHHHHHHHC-
Confidence 46555 544 57777777766543 566777788889987666 57899999999999999876433 334
Q ss_pred CcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEeccccccc
Q 011801 157 GVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAAT 236 (477)
Q Consensus 157 g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~ 236 (477)
|+++..++. .|++++++++.+ ++|+|++++|+||+|.+.+ +++|+++|+++|+++|+|++|+..
T Consensus 196 G~~v~~vd~-------~d~e~l~~ai~~------~TklV~lesPsNPtG~i~D---l~~I~~lAk~~g~~lIVD~A~a~~ 259 (464)
T PLN02509 196 GVVVKRVNT-------TNLDEVAAAIGP------QTKLVWLESPTNPRQQISD---IRKIAEMAHAQGALVLVDNSIMSP 259 (464)
T ss_pred CeEEEEeCC-------CCHHHHHHhCCc------CCeEEEEECCCCCCCCHHH---HHHHHHHHHHcCCEEEEECCcccc
Confidence 888887753 257888887743 7899999999999999755 999999999999999999998643
Q ss_pred ccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCC-ceEEEEEeCCHHHHHHHHHhccc--CCCchHHHHHHHHhcC
Q 011801 237 VFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPG-FRVGIVYSFNDTVVNCGRKMSSF--GLVSSQTQYLLASMLS 313 (477)
Q Consensus 237 ~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G-~RvG~i~~~~~~i~~~~~~~~~~--~~vs~~~q~~~~~~L~ 313 (477)
.+. . ++ ..+..++++|++|.++-+| .=.|++++.++.+...++.++.. ...++...+++..-|+
T Consensus 260 ~~~-~---pl---------~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~~~~g~~l~p~~A~l~lr~L~ 326 (464)
T PLN02509 260 VLS-R---PL---------ELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGIK 326 (464)
T ss_pred ccC-C---hh---------hcCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHHHHHhcCCCcCHHHHHHHHhhhh
Confidence 221 1 11 1134588899999987433 34677877665544433322221 1234444444433333
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 011801 314 DDEFVDNFLVETSKRLAKRHHNFTKGLEQV 343 (477)
Q Consensus 314 ~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~ 343 (477)
. +..+.++..+..+.+.+.|+++
T Consensus 327 t-------L~~R~~r~~~nA~~la~~L~~~ 349 (464)
T PLN02509 327 T-------MALRIEKQQENARKIAMYLSSH 349 (464)
T ss_pred h-------HHHHHHHHHHHHHHHHHHHhcC
Confidence 2 3445556667778888888775
No 231
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.83 E-value=2.8e-18 Score=174.19 Aligned_cols=285 Identities=20% Similarity=0.271 Sum_probs=194.1
Q ss_pred cHHHHHHHHHHHhcccCCCCccCC-CcEEEeCChHHHHHHHHHHh---cCCCCeEEEcCCCccchH---HHHhhhCCcEE
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDP-DRIVMGGGATGANELIMFCL---ANPGDAFLVPSPYYAAFD---RDLSWRTGVQI 160 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~-~~i~~t~G~t~al~~i~~~l---~~~Gd~vlv~~P~y~~~~---~~~~~~~g~~~ 160 (477)
+.+.|+.++++++ .++ ++|++++|+|.+++.++..+ .++||.|++..-.|++.. ..+..+.|+++
T Consensus 45 ~~~~r~~la~~lg--------~~~~~~v~~~~~~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v 116 (371)
T PF00266_consen 45 LEEAREALAKLLG--------APPDEEVVFTSNGTEALNAVASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEV 116 (371)
T ss_dssp HHHHHHHHHHHHT--------SSTTEEEEEESSHHHHHHHHHHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEE
T ss_pred HHHHHHHHHHhcC--------Cccccccccccccchhhhhhhhccccccccccccccccccccccccccccccccchhhh
Confidence 4688888999987 456 79999999999999999999 799999999999988765 22222339999
Q ss_pred EEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCC
Q 011801 161 VPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSS 240 (477)
Q Consensus 161 ~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~ 240 (477)
..++.+.. -.+|++++++++.+ ++++|+++..+|-||...+ +++|.++|+++|+++++|.+++ +..
T Consensus 117 ~~i~~~~~--~~~~~~~~~~~l~~------~~~lv~~~~~~~~tG~~~p---i~~I~~~~~~~~~~~~vD~~~~---~g~ 182 (371)
T PF00266_consen 117 RVIPADPG--GSLDLEDLEEALNP------DTRLVSISHVENSTGVRNP---IEEIAKLAHEYGALLVVDAAQS---AGC 182 (371)
T ss_dssp EEEEEGTT--SSCSHHHHHHHHHT------TESEEEEESBETTTTBBSS---HHHHHHHHHHTTSEEEEE-TTT---TTT
T ss_pred cccccccc--chhhhhhhhhhhcc------ccceEEeecccccccEEee---eceehhhhhccCCceeEechhc---ccc
Confidence 88888653 36789999999964 8999999999999999999 8889999999999999999997 332
Q ss_pred CCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHh-cc--------------------c--
Q 011801 241 PKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKM-SS--------------------F-- 297 (477)
Q Consensus 241 ~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~-~~--------------------~-- 297 (477)
-+ ..+. ..+..+++.|..|.+|.+| +|+++.+++.+... +.. .. +
T Consensus 183 ~~-id~~--------~~~~D~~~~s~~Kl~gp~G--~g~l~v~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (371)
T PF00266_consen 183 VP-IDLD--------ELGADFLVFSSHKLGGPPG--LGFLYVRPEAIERL-RPAKPGGGYLDFPSLQEYGLADDARRFEG 250 (371)
T ss_dssp SS---TT--------TTTESEEEEESTSTTSSST--EEEEEEEHHHHHHH-HTSSSSSSTTTHHHHHHHCHHSTTTGSSS
T ss_pred cc-cccc--------ccccceeeecccccCCCCc--hhhheehhhhhhcc-ccccccccccccccchhcccccccccccc
Confidence 22 2211 2345578899999555444 89999977654443 211 11 1
Q ss_pred CCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCC-CeEec----CCceEEEEeeccchhhccCchHH
Q 011801 298 GLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVG-INCLK----SNAGLFFWMDLRHLLKEKTLEGE 372 (477)
Q Consensus 298 ~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~g-i~~~~----~~~g~~~~~~l~~~~~~~~~~~e 372 (477)
++.+.....++...++.-. +.-+++..++..+..+++.+.|.+.+ +.+.. ...+..+.+.++.. +.
T Consensus 251 GT~~~~~~~~l~~al~~~~--~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~------ 321 (371)
T PF00266_consen 251 GTPNVPAIYALNEALKLLE--EIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIVSFNLPGS-DA------ 321 (371)
T ss_dssp SS--HHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEEEEEETTS-SH------
T ss_pred cceeeehhhhHHHHHhhhh--ccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceEEEeecCC-CH------
Confidence 1233333333333333211 23355667777888888899998874 44432 22233445555432 11
Q ss_pred HHHHHHHHHhcCeEEeCCCCCCC------CCCCEEEEEeccC-CHHHHHHH
Q 011801 373 IALWRTIVNDVKLNVSPGSSFQC------TEPGWFRVCFANM-DDDTLQVA 416 (477)
Q Consensus 373 ~~l~~~ll~~~gI~v~pg~~f~~------~~~~~~Rl~~~~~-~~e~l~~~ 416 (477)
.++.+.+.+ .||.++.|..+.. ...+.+||+++.. +++|++++
T Consensus 322 ~~~~~~L~~-~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 322 DDVVKYLEE-RGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp HHHHHHHHH-HTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred HHHHHHHhh-cCEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 134455544 4999999876640 1237999999876 88999874
No 232
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.82 E-value=1.4e-17 Score=170.50 Aligned_cols=274 Identities=16% Similarity=0.186 Sum_probs=174.9
Q ss_pred CCcEEEeCChHHHHHHHHHHhc-------CC-CCeEEEcCCCccchHHHHhhhCCcE------------EEEEeccCCCC
Q 011801 111 PDRIVMGGGATGANELIMFCLA-------NP-GDAFLVPSPYYAAFDRDLSWRTGVQ------------IVPVHCDISNN 170 (477)
Q Consensus 111 ~~~i~~t~G~t~al~~i~~~l~-------~~-Gd~vlv~~P~y~~~~~~~~~~~g~~------------~~~v~~~~~~~ 170 (477)
.+.+++++++++|++.+++... ++ .+.|+..+-+|++.....-..++.. +..++.
T Consensus 92 ~~~~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 166 (397)
T TIGR03246 92 ADKVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPY----- 166 (397)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCC-----
Confidence 3689999999999999998751 12 3568888877877643322221321 112221
Q ss_pred cccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCC-CHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHh
Q 011801 171 FKITREALEAAYERAQEASINIKGLIITNPSNPLGTTL-DRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEV 249 (477)
Q Consensus 171 f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~-~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~ 249 (477)
.|++++++++.+ ++++|++..++++.|... +.+.+++|.++|++||+++|+||+|.++...+..+ .....
T Consensus 167 --~d~~~l~~~l~~------~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~-a~~~~ 237 (397)
T TIGR03246 167 --NDLAAAKALISD------KTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELY-AYMHY 237 (397)
T ss_pred --CCHHHHHHHhcc------CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccch-hhhhc
Confidence 168888888753 677777774444555443 88999999999999999999999998754444322 11111
Q ss_pred hhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHh---cccCCCchHHHHHHHHhcCChhhHHHHHHHHH
Q 011801 250 IQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKM---SSFGLVSSQTQYLLASMLSDDEFVDNFLVETS 326 (477)
Q Consensus 250 ~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~---~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~ 326 (477)
+..++ +.++||.+| .|+|+|+++++++ +.+.+... ..|+ .+++++.++.+.|+..+ ..+..
T Consensus 238 ----gv~pD----i~t~~K~lg-gG~pigav~~~~~-i~~~~~~~~~~~t~~-~~p~~~aaa~a~l~~~~-----~~~l~ 301 (397)
T TIGR03246 238 ----GVTPD----ILTSAKALG-GGFPIGAMLTTTE-IAAHLKVGTHGTTYG-GNPLACAVAGKVLDLVN-----TPELL 301 (397)
T ss_pred ----CCCCC----EEEeehhhh-CCcceeEEEEcHH-HHHhccCCCcCCCCC-CCHHHHHHHHHHHHHHh-----hccHH
Confidence 11223 338999998 8999999999554 54444322 1232 56677777766665321 12345
Q ss_pred HHHHHHHHHHHHHHhhCC-----CeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEE
Q 011801 327 KRLAKRHHNFTKGLEQVG-----INCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWF 401 (477)
Q Consensus 327 ~~l~~r~~~l~~~L~~~g-----i~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~ 401 (477)
++++++.+++.+.|++++ +.... ..|.++.+.+..... .....++..+++ +||.+.+. +++++
T Consensus 302 ~~~~~~~~~l~~~L~~l~~~~~~~~~vr-g~G~~~~i~~~~~~~----~~~~~~~~~l~~-~Gv~~~~~------g~~~l 369 (397)
T TIGR03246 302 AGVKQRHDLFVDGLEKINARYNVFSEIR-GKGLLIGAVLTEAYQ----GKAKQFVNAAAE-EGVIALIA------GPNVV 369 (397)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEeee-cCceEEEEEEcCchh----hHHHHHHHHHHH-CCeEEeec------CCCEE
Confidence 566777777877777653 12222 234555555542110 122356666665 59998763 24689
Q ss_pred EEEecc-CCHHHHHHHHHHHHHHHhh
Q 011801 402 RVCFAN-MDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 402 Rl~~~~-~~~e~l~~~l~~l~~~~~~ 426 (477)
|++.+. ++++++++++++|.+++.+
T Consensus 370 R~~p~~~~t~~~i~~~~~~l~~~l~~ 395 (397)
T TIGR03246 370 RFAPSLVISDDDIDEGLARFERAIEQ 395 (397)
T ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 997655 4999999999999998864
No 233
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.82 E-value=4.5e-19 Score=168.91 Aligned_cols=289 Identities=18% Similarity=0.294 Sum_probs=182.8
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCC------CCeEEEcCCCccchHHHHhhhCCcEEE
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANP------GDAFLVPSPYYAAFDRDLSWRTGVQIV 161 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~------Gd~vlv~~P~y~~~~~~~~~~~g~~~~ 161 (477)
.++|.+.|.+.++.+.+ ...+.-.|++++|+|+.++.++.+|..+ --.|+...|+|+.|....... .....
T Consensus 45 s~eL~~~Ir~LH~~VGN--Avt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f-~s~~y 121 (363)
T PF04864_consen 45 SPELERQIRRLHRVVGN--AVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFF-DSRLY 121 (363)
T ss_dssp -HHHHHHHHHHHHHH-S--B--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT--BTTE
T ss_pred cHHHHHHHHHHHHHhcc--ccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhc-cccCc
Confidence 58999999999987655 3356668999999999999999998432 147999999999998776544 33333
Q ss_pred EEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEE-EEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCC
Q 011801 162 PVHCDISNNFKITREALEAAYERAQEASINIKGL-IITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSS 240 (477)
Q Consensus 162 ~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~v-ii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~ 240 (477)
...-|. ..|. +.+ + .-..| ++|+||||.|.+ .+.++ +.-+..+|.|-+|. -
T Consensus 122 ~w~Gda-~~~~-~~~------------~-~~~~IElVTSPNNPDG~l-----r~~V~---~g~~~k~I~D~AYY-----W 173 (363)
T PF04864_consen 122 KWAGDA-SNFK-NSD------------N-PSPYIELVTSPNNPDGQL-----REAVL---NGSSGKVIHDLAYY-----W 173 (363)
T ss_dssp EEEEEC-CCGT-T-S--------------CCGEEEEEESS-TTT-----------SS---TTTEEEEEEE-TT------S
T ss_pred cccccH-Hhhc-cCC------------C-CCCeEEEEeCCCCCcccc-----cchhc---CCCCcceeeeeeee-----c
Confidence 344332 2332 110 1 22344 999999999998 55555 36677889999996 3
Q ss_pred CCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhc--ccCCCchHHHHHHHHhcCC----
Q 011801 241 PKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMS--SFGLVSSQTQYLLASMLSD---- 314 (477)
Q Consensus 241 ~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~--~~~~vs~~~q~~~~~~L~~---- 314 (477)
|.+.++..-. +..+.+.|+||.-|.+|-|+||.+..++.+.+.+.+.. +-..+|.-+|.-++.+|..
T Consensus 174 PhyTpI~~~a-------D~DiMLFT~SK~TGHAGSR~GWAlVKD~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~~ 246 (363)
T PF04864_consen 174 PHYTPITAPA-------DHDIMLFTLSKLTGHAGSRFGWALVKDEEVAKKMTKYMELNTIGVSRDSQLRALKILKVVLDG 246 (363)
T ss_dssp TTTS---S-B---------SEEEEEHHHHCS-GGG-EEEEEES-HHHHHHHHHHHHHHCSS--HHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCC-------CCceEEEEEecccCccccccceeeecCHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhc
Confidence 5555555432 44577889999999999999999998888877665442 2233788888776666642
Q ss_pred hhh---HHHHHHHHHHHHHHHHHHHHHHHhhCCC-eE--ec-----------CCceEEEEeeccchhhccCchHHHHHHH
Q 011801 315 DEF---VDNFLVETSKRLAKRHHNFTKGLEQVGI-NC--LK-----------SNAGLFFWMDLRHLLKEKTLEGEIALWR 377 (477)
Q Consensus 315 ~~~---~~~~~~~~~~~l~~r~~~l~~~L~~~gi-~~--~~-----------~~~g~~~~~~l~~~~~~~~~~~e~~l~~ 377 (477)
.+. ...+..-.++.+++|.+.|.+.+.+-+. .. .. ....-|.|+++..... +=|.
T Consensus 247 ~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~eed--------~DC~ 318 (363)
T PF04864_consen 247 YGTEKGTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCEREED--------EDCY 318 (363)
T ss_dssp CCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSCGG--------SSHH
T ss_pred ccCCCCccchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCccc--------ccHH
Confidence 100 0024566678889999999999876531 11 11 1123499999985311 1256
Q ss_pred HHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHH
Q 011801 378 TIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFV 424 (477)
Q Consensus 378 ~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~ 424 (477)
..++++||..+.|..|+. ++.++|||.-. ++++++.+++||..++
T Consensus 319 ~~l~~~~I~tr~G~~fga-~~ryVRlSml~-~~d~Fd~l~~rL~~lv 363 (363)
T PF04864_consen 319 AVLREAKIITRSGVLFGA-DSRYVRLSMLK-RDDDFDQLLERLSKLV 363 (363)
T ss_dssp HHHHCTTEEEEEGGGGTS--TTEEEEESSS--HHHHHHHHHHHHCCH
T ss_pred HHHHhCCcccCCCCccCC-CCCeEEEeccC-CHHHHHHHHHHHHhhC
Confidence 778899999999999986 57899999864 8999999999998653
No 234
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.81 E-value=4.8e-17 Score=167.36 Aligned_cols=289 Identities=10% Similarity=0.115 Sum_probs=175.3
Q ss_pred CcEEEeCChHHHHHHHHHHhc-CCC-CeEEEcCCCccchHHHHhhhCCc-------------EEEEEeccCCCCcccC--
Q 011801 112 DRIVMGGGATGANELIMFCLA-NPG-DAFLVPSPYYAAFDRDLSWRTGV-------------QIVPVHCDISNNFKIT-- 174 (477)
Q Consensus 112 ~~i~~t~G~t~al~~i~~~l~-~~G-d~vlv~~P~y~~~~~~~~~~~g~-------------~~~~v~~~~~~~f~i~-- 174 (477)
+++++++++++|++.+++... -.| .+|+....+|++........+|. .++.++..... -.++
T Consensus 102 ~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~-~~~~~~ 180 (421)
T PRK09792 102 AKTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDL-HGISTQ 180 (421)
T ss_pred ceEEEeCChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccc-ccccHH
Confidence 589999999999999887642 123 57888888888764322111121 11222221111 0122
Q ss_pred --HHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCC-CHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhh
Q 011801 175 --REALEAAYERAQEASINIKGLIITNPSNPLGTTL-DRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQ 251 (477)
Q Consensus 175 --~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~-~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~ 251 (477)
++++++.+++. ....++++|++.--++|+|..+ +.+.+++|.++|+++|+++|+||+|.++.+.+.. .+.... .
T Consensus 181 ~~~~~l~~~~~~~-~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~-~a~~~~-~ 257 (421)
T PRK09792 181 DSLDAIERLFKSD-IEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKL-FAMDHY-A 257 (421)
T ss_pred HHHHHHHHHHHhc-cCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCch-hHHHhc-C
Confidence 35666655431 0123688877765589999765 8999999999999999999999999987665543 232222 1
Q ss_pred hccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHH--h-cccCCCchHHHHHHHHh---cCChhhHHHHHHHH
Q 011801 252 EMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRK--M-SSFGLVSSQTQYLLASM---LSDDEFVDNFLVET 325 (477)
Q Consensus 252 ~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~--~-~~~~~vs~~~q~~~~~~---L~~~~~~~~~~~~~ 325 (477)
..+| +.+|||.+| +|+|+||++++++ +.+.+.. . .++ ..+++++.++.+. ++++++ +++.
T Consensus 258 ---~~pD----i~t~gK~l~-~G~pigav~~~~~-i~~~~~~~~~~~T~-~gnpl~~aaa~a~l~~l~~~~~----~~~~ 323 (421)
T PRK09792 258 ---DKPD----LMTMAKSLA-GGMPLSGVVGNAN-IMDAPAPGGLGGTY-AGNPLAVAAAHAVLNIIDKESL----CERA 323 (421)
T ss_pred ---CCCc----EEEeehhhc-CCCceEEEEEcHH-HHhccCCCCcCCCC-CCCHHHHHHHHHHHHHHHhhhH----HHHH
Confidence 1334 469999998 9999999999554 4433221 1 233 3677778754444 444333 2222
Q ss_pred HHHHHHHHHHHHHHHh-hCCCeEecCCc-eEEEEeeccchhh-ccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEE
Q 011801 326 SKRLAKRHHNFTKGLE-QVGINCLKSNA-GLFFWMDLRHLLK-EKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFR 402 (477)
Q Consensus 326 ~~~l~~r~~~l~~~L~-~~gi~~~~~~~-g~~~~~~l~~~~~-~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~R 402 (477)
+ .+.++.+...+.|. +.+. +....+ |+++|+.++.... .........++..+++ +||.+.+... .++.+|
T Consensus 324 ~-~~g~~l~~~l~~l~~~~p~-v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~~-~Gv~i~~~g~----~~~~ir 396 (421)
T PRK09792 324 N-QLGQRLKNTLIDAKESVPA-IAAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRALA-QGLLLLTCGA----YGNVIR 396 (421)
T ss_pred H-HHHHHHHHHHHHHHHhCCC-cceecccceEEEEEecCCccCCcchHHHHHHHHHHHH-CCcEEeecCC----CCCEEE
Confidence 2 33333333333332 2343 223334 8999999974211 0000112345666665 5999964221 246899
Q ss_pred EEecc-CCHHHHHHHHHHHHHHHh
Q 011801 403 VCFAN-MDDDTLQVALNRIAAFVQ 425 (477)
Q Consensus 403 l~~~~-~~~e~l~~~l~~l~~~~~ 425 (477)
++++. ++++++++++++|.+++.
T Consensus 397 l~P~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 397 FLYPLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred EeCCCcCCHHHHHHHHHHHHHHHh
Confidence 99887 599999999999999874
No 235
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.81 E-value=2.7e-17 Score=168.96 Aligned_cols=302 Identities=14% Similarity=0.098 Sum_probs=186.9
Q ss_pred CcHHHHH----HHHHHHhcccCCCCccCCCcE-EEeCChHHHHHHHHHHhcCCCCeEEEcCCCccch-HHHHhhh-CCcE
Q 011801 87 GLPEFRQ----AVAKFMGKGRGGRVTFDPDRI-VMGGGATGANELIMFCLANPGDAFLVPSPYYAAF-DRDLSWR-TGVQ 159 (477)
Q Consensus 87 G~~~lr~----aia~~~~~~~g~~~~~~~~~i-~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~-~~~~~~~-~g~~ 159 (477)
...+|.+ .+|++++ .+.. +.+++++.|+..++.++++|||.|+++...|.+. ...++.. .+..
T Consensus 71 ~~~~lE~~~~~~la~l~g----------~~~alv~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~ 140 (416)
T PRK13034 71 FVDEVEALAIERAKQLFG----------CDYANVQPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKW 140 (416)
T ss_pred HHHHHHHHHHHHHHHHhC----------CCceEEecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeeecCCcceeccce
Confidence 3567777 7888776 2345 4567889999999999999999999999998762 2222210 0222
Q ss_pred E--EEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccc
Q 011801 160 I--VPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATV 237 (477)
Q Consensus 160 ~--~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~ 237 (477)
. ..++.+. .++.+|++++++.+++. ++|+|+++.+. +|...+ +.+|.++|+++|+++|+|++++..+
T Consensus 141 ~~~~~~~~~~-~~~~~d~~~le~~l~~~-----~~klVi~~~~~--~g~~~d---l~~l~~la~~~g~~livD~Aha~G~ 209 (416)
T PRK13034 141 YNAVQYGVDR-LTGLIDYDEVEELAKEH-----KPKLIIAGFSA--YPRELD---FARFREIADEVGALLMVDMAHIAGL 209 (416)
T ss_pred eeeEEccccc-ccCCcCHHHHHHHHhhc-----CCeEEEECCCc--cccccC---HHHHHHHHHHcCCEEEEeCcccccC
Confidence 2 2343332 24568999999987642 57888776654 466666 7777888999999999999987433
Q ss_pred cCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhcccCC--CchHHHHHHHHhcCCh
Q 011801 238 FSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGL--VSSQTQYLLASMLSDD 315 (477)
Q Consensus 238 ~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~~~~~--vs~~~q~~~~~~L~~~ 315 (477)
+....... . .....++++|++|.++.+ .-|++++.++.+...++.....+. .+.+... ++..+.-.
T Consensus 210 ~~~g~~~~--~-------~~~~Di~~~s~~K~l~g~--~GG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-aa~~~al~ 277 (416)
T PRK13034 210 VAAGEHPN--P-------FPHAHVVTTTTHKTLRGP--RGGMILTNDEEIAKKINSAVFPGLQGGPLMHVI-AAKAVAFG 277 (416)
T ss_pred cccCCCCC--C-------CCCceEEEEeCcccCCCC--CCeEEEECcHHHHHHHHhhcCCcccCCccHHHH-HHHHHHHH
Confidence 32211110 0 113457889999999323 248888877766655554322221 1111111 11111111
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecC-CceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCC-
Q 011801 316 EFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKS-NAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSF- 393 (477)
Q Consensus 316 ~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~-~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f- 393 (477)
+.++....+.++++.++.++|.+.|.+.|+++..+ .....+++.+...... ...+...+++.||.+.+-...
T Consensus 278 ~~~~~~~~~~~~~l~~~a~~l~~~L~~~G~~~~~~~~~t~i~~v~~~~~~~~------~~~~~~~L~~~GI~v~~~~~p~ 351 (416)
T PRK13034 278 EALQPEFKTYAKQVIANAQALAEVLKERGYDLVSGGTDNHLLLVDLRPKGLS------GKDAEQALERAGITVNKNTVPG 351 (416)
T ss_pred HHhChhHHHHHHHHHHHHHHHHHHHHHcCCEeccCCCCCcEEEEEcCCCCCC------HHHHHHHHHhCCcEEeccCCCC
Confidence 11111123456788899999999999899987642 2335666666532111 123445567779998752111
Q ss_pred ---CCCCCCEEEEEecc-----CCHHHHHHHHHHHHHHHhhh
Q 011801 394 ---QCTEPGWFRVCFAN-----MDDDTLQVALNRIAAFVQQD 427 (477)
Q Consensus 394 ---~~~~~~~~Rl~~~~-----~~~e~l~~~l~~l~~~~~~~ 427 (477)
.+..+..+|+++.. +++++++++++.|++++.+.
T Consensus 352 ~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~~~~ 393 (416)
T PRK13034 352 DTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILDVLDDL 393 (416)
T ss_pred CCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHHhcC
Confidence 11124579999754 36899999999999998753
No 236
>PLN02624 ornithine-delta-aminotransferase
Probab=99.81 E-value=1.4e-17 Score=173.55 Aligned_cols=296 Identities=15% Similarity=0.173 Sum_probs=179.2
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcC--------C-CC-eEEEcCCCccchHHHHhhhCC
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLAN--------P-GD-AFLVPSPYYAAFDRDLSWRTG 157 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~--------~-Gd-~vlv~~P~y~~~~~~~~~~~g 157 (477)
..+|.+.++++++ .+.+++++++++|++.++..... + +. .|+...-+|.+.....-..++
T Consensus 119 ~~~la~~L~~~~~----------~~~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~ 188 (474)
T PLN02624 119 FPEFAEYLTSMFG----------YDMVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSC 188 (474)
T ss_pred HHHHHHHHHhhcC----------CCeEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCC
Confidence 3556666666542 35899999999999999865321 1 33 577777777765322211111
Q ss_pred cE------------EEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHH-HHHHHHHHHhcC
Q 011801 158 VQ------------IVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDT-LKSLVSFINDKN 224 (477)
Q Consensus 158 ~~------------~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~-l~~l~~~~~~~~ 224 (477)
-. +..++. -|++.+++.++. ...++++|++..++|++|.+++.++ +++|.++|++||
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~---~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~g 258 (474)
T PLN02624 189 DNEATRGFGPLLPGHLKVDF-------GDLDALEKIFEE---DGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHN 258 (474)
T ss_pred CccccccCCCCCCCceEeCC-------CCHHHHHHHHHh---CCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 11 111221 167888888863 2347889999999999999988775 999999999999
Q ss_pred eEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHh---cccCCCc
Q 011801 225 IHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKM---SSFGLVS 301 (477)
Q Consensus 225 ~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~---~~~~~vs 301 (477)
+++|+||+|.++...+..+ .. +.. +..++ +.+|||.+|.+++++|+++++++ +...+... ..+ ..+
T Consensus 259 illI~DEv~tG~GrtG~~~-a~-~~~---~i~pD----iv~lsK~lggG~~pigav~~~~~-i~~~~~~~~~~~T~-~g~ 327 (474)
T PLN02624 259 VLMIADEIQTGLARTGKML-AC-DWE---EVRPD----VVILGKALGGGVIPVSAVLADKD-VMLCIKPGEHGSTF-GGN 327 (474)
T ss_pred CEEEEeccccCcCcCcchh-hH-Hhc---CCCCC----EEEecccccCCCCcceeeeecHH-HHhHhccCCcCCCC-CCC
Confidence 9999999998754444321 11 111 11222 23578999966699999999654 43333322 122 256
Q ss_pred hHHHHHHHHhcCCh---hhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchhhccCchHHHHHHHH
Q 011801 302 SQTQYLLASMLSDD---EFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRT 378 (477)
Q Consensus 302 ~~~q~~~~~~L~~~---~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ 378 (477)
++.+.++.+.|+-. ++ .+...+..++++++.+.+.+.+.. .+....+. |.+..+.+..... ......++++.
T Consensus 328 pl~~aaa~aaLe~l~~~~l-~~~~~~~~~~l~~~L~~l~~~~~~-~i~~vrg~-G~~~~i~l~~~~~--~~~~a~~~~~~ 402 (474)
T PLN02624 328 PLASAVAMAALQVVQDEKL-AERSAKLGQELRDQLQKIQKQFPK-LIKEVRGR-GLLNAVVLNSPKL--GPVSAYDVCLK 402 (474)
T ss_pred HHHHHHHHHHHHHHHhchH-HHHHHHHHHHHHHHHHHHHHhCCC-ceEEEEee-EEEEEEEecCCCc--ChHHHHHHHHH
Confidence 77777777776421 11 122233333333333332222221 12223333 4555555542110 01122356666
Q ss_pred HHHhcCeEEeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHhh
Q 011801 379 IVNDVKLNVSPGSSFQCTEPGWFRVCFAN-MDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 379 ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~-~~~e~l~~~l~~l~~~~~~ 426 (477)
+ .+.||.+.|+. ++++||++.. ++++++++++++|++++.+
T Consensus 403 L-~e~GV~v~p~~------~~~lR~~p~l~~t~e~id~~l~~L~~~l~~ 444 (474)
T PLN02624 403 L-KERGLLAKPTH------DTIIRLAPPLSISEDELQECSKALSDVLEH 444 (474)
T ss_pred H-HhCCeEEecCC------CCEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence 5 45799998862 5789999743 4999999999999999865
No 237
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.81 E-value=9.4e-18 Score=161.29 Aligned_cols=330 Identities=14% Similarity=0.117 Sum_probs=208.7
Q ss_pred cccccccccccHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCCh
Q 011801 41 IQLGLAENQLCFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGA 120 (477)
Q Consensus 41 i~l~~~~n~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~ 120 (477)
++|..+.-.-+.+.+.+.+.+.+. .....|++.+-...+.+.+++.++ ...++++.++
T Consensus 2 ~~f~SDn~~g~~~~m~eam~~a~~------------~~~~~YG~D~~~~~~e~~~ae~~g----------~~a~~Fv~sG 59 (342)
T COG2008 2 IDFRSDNVAGPTPEMREALAAANA------------VGDDVYGEDPTTNALEQRIAELFG----------KEAALFVPSG 59 (342)
T ss_pred CccccCccCCCCHHHHHHHHhccc------------cCCCCCCCCHHHHHHHHHHHHHhC----------CceEEEecCc
Confidence 455555444455666666665431 133457665545555555555554 3789999999
Q ss_pred HHHHHHHHHHhcCCCCeEEEcCCCccchHHH--HhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEe
Q 011801 121 TGANELIMFCLANPGDAFLVPSPYYAAFDRD--LSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIIT 198 (477)
Q Consensus 121 t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~--~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~ 198 (477)
|+|+.+.+...++||+.|++..-.+-...+. ++...++. +++..+..+.++++++++.+++...-+...+..+++.
T Consensus 60 T~aN~lal~~~~~~~~~vi~~~~aHi~~~E~Ga~~~~~~~~--~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e 137 (342)
T COG2008 60 TQANQLALAAHCQPGESVICHETAHIYTDECGAPEFFGGGQ--KLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLE 137 (342)
T ss_pred cHHHHHHHHHhcCCCCeEEEeccccceecccCcHHHHcCCc--eeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEe
Confidence 9999999999999999999998877544332 33332333 3344444567899999999998622133455566666
Q ss_pred CCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccc--cccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCce
Q 011801 199 NPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAA--TVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFR 276 (477)
Q Consensus 199 nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~--~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~R 276 (477)
|++|-.|+++|.++|++|.++|+++|+.|.+|.+.-. .+..+ .+..++.. ....+..++||..+.|+
T Consensus 138 ~~~te~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg---~~~~~~~~------~~D~v~~~~tK~g~~~~-- 206 (342)
T COG2008 138 NTATEGGTVYPLDELEAISAVCKEHGLPLHMDGARLANALVALG---VALKTIKS------YVDSVSFCLTKGGGAPV-- 206 (342)
T ss_pred eccCCCceecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcC---CCHHHHHh------hCCEEEEecccCCccee--
Confidence 6667889999999999999999999999999998632 22223 33333322 22245558899887664
Q ss_pred EEEEEeCCHHHHHHHHHhc-ccCC-Cc--hHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEecCC
Q 011801 277 VGIVYSFNDTVVNCGRKMS-SFGL-VS--SQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLKSN 351 (477)
Q Consensus 277 vG~i~~~~~~i~~~~~~~~-~~~~-vs--~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~~~ 351 (477)
|.|+..+..+++.++.++ ..+. .+ .+.......+|++.-|. ....+-.+..+.|.+.|... |+++..+.
T Consensus 207 -gAiv~gn~~~~~~a~~~rK~~Ggl~~k~r~laA~~~~~l~~~~~~-----~~~~Han~mA~~La~~~~~~~G~~~~~~~ 280 (342)
T COG2008 207 -GAIVFGNRDFAKRARRWRKRAGGLMRKARFLAAQGLYALEDDVWR-----LAADHANAMAARLAEGLEAKPGVKLAFPV 280 (342)
T ss_pred -eeEEEcCHHHHHHHHHHHHHhcccHhhhhHHHHHHHHHHhccHHH-----HHHHHHHHHHHHHHHhhhhcCCceeccCC
Confidence 888877776665544321 1221 22 23333444555554331 11111122256678888844 99887765
Q ss_pred ceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccC-CHHHHHHHHHHHHHHH
Q 011801 352 AGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANM-DDDTLQVALNRIAAFV 424 (477)
Q Consensus 352 ~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~ 424 (477)
-.+.++++++...- .. ......+...|+.+.+++ .-+|++.+.. +++++++++..++.++
T Consensus 281 ~tN~vf~~l~~~~i-----~~-l~~~~~~~~~~~~~~~~~-------~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 281 ETNMVFVRLPESAI-----EA-LRLAGALFYRGVLIGAHG-------EIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred cccEEEEECChHHH-----HH-HHhhchhheeeeeccCCC-------ceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 55789999995211 11 112223344466655432 3589998875 8999999999999875
No 238
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.81 E-value=6.2e-17 Score=163.47 Aligned_cols=321 Identities=15% Similarity=0.206 Sum_probs=217.1
Q ss_pred ccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHH-HhhhCCcE
Q 011801 81 IFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRD-LSWRTGVQ 159 (477)
Q Consensus 81 ~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~-~~~~~g~~ 159 (477)
.|.......+|.++++++++ .+.++.++.+|.|+++++.+.++|||.| +..+|...... +.+. |..
T Consensus 73 ~Yagd~s~~~LE~~vAe~lG----------~e~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI~~~-Ga~ 139 (460)
T PRK13237 73 AYAGSRNFYHLEETVQEYYG----------FKHVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQELN-GGI 139 (460)
T ss_pred hhcCCCcHHHHHHHHHHHHC----------CCeEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHHHhC-CcE
Confidence 58877788999999999997 3569999999999999877778999964 44434333333 5555 776
Q ss_pred EEEEecc--------CCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCc-ccCCCHHHHHHHHHHHHhcCeEEEec
Q 011801 160 IVPVHCD--------ISNNFKITREALEAAYERAQEASINIKGLIITNPSNPL-GTTLDRDTLKSLVSFINDKNIHLVCD 230 (477)
Q Consensus 160 ~~~v~~~--------~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPt-G~~~~~~~l~~l~~~~~~~~~~lI~D 230 (477)
.+.+.++ ...++.+|+++|++++++. ...++++|.+.+++|.. |...|.+++++|.++|+++|+.||+|
T Consensus 140 fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~--~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~D 217 (460)
T PRK13237 140 FVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEV--GAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFD 217 (460)
T ss_pred EEeeecccccccccCCCCCCCcCHHHHHHHhccc--cCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEE
Confidence 5555322 1246789999999999742 12356677888889988 79999999999999999999999999
Q ss_pred cccccc--ccC-----CCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhc-------c
Q 011801 231 EIYAAT--VFS-----SPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMS-------S 296 (477)
Q Consensus 231 e~y~~~--~~~-----~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~-------~ 296 (477)
.+.... +|- +-.-.++.+++.+.. .-...++.|++|.++.+- -|+|+..++.+.+.++.+. +
T Consensus 218 aAra~gna~fI~~re~~y~~~~i~ei~~e~~--s~aD~~t~S~~K~~~~~~--GG~i~t~D~eL~~~~r~~~~~~eG~~t 293 (460)
T PRK13237 218 ATRCVENAYFIKEREEGYQDKSIKEIVHEMF--SYADGCTMSGKKDCLVNI--GGFLAMNDEELFDEAKELVVVYEGMPS 293 (460)
T ss_pred CcchhcChhhhcccccccCCCcHhHHhhhcc--CcCcEEEEeCCCCCCCCC--ceEEEECCHHHHHHHHHhccccCCCcC
Confidence 998621 111 111135555444331 122356678999998652 3899998888877776542 2
Q ss_pred cCCCchHHHHHHHHhcCC-hhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchh---hccCchHH
Q 011801 297 FGLVSSQTQYLLASMLSD-DEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLL---KEKTLEGE 372 (477)
Q Consensus 297 ~~~vs~~~q~~~~~~L~~-~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~---~~~~~~~e 372 (477)
++..+.--..+++.-|.+ .+ ..++..+ + ...++|.+.|.+.|+++..|.+|--++++....+ ....+..
T Consensus 294 ygg~~grd~~alAvgl~E~~~--~~y~~~r---i-~~~~~l~~~L~~~Gvpv~~p~ggH~v~vda~~~lph~~~~~~p~- 366 (460)
T PRK13237 294 YGGMAGRDMEAMAIGIEESVQ--YEYIEHR---V-GQVRYLGEKLLAAGVPIVEPVGGHAVFLDARRFLPHLPQDQFPA- 366 (460)
T ss_pred CCChhhhHHHHHHhHHHhhch--HHHHHHH---H-HHHHHHHHHHHHCCCceecCCCceEEEEEhHHhCCCCCcccChH-
Confidence 333333233333333332 21 2334332 2 2347889999999999999999988899876532 2233333
Q ss_pred HHHHHHHHHhcCeEEeC-CCCCCCC-----C---C--CEEEEEecc--CCHHHHHHHHHHHHHHHhhh
Q 011801 373 IALWRTIVNDVKLNVSP-GSSFQCT-----E---P--GWFRVCFAN--MDDDTLQVALNRIAAFVQQD 427 (477)
Q Consensus 373 ~~l~~~ll~~~gI~v~p-g~~f~~~-----~---~--~~~Rl~~~~--~~~e~l~~~l~~l~~~~~~~ 427 (477)
..|...|..+.||.-.- |+..... + + ..+|+.+.. .|.++++...++|..+.++.
T Consensus 367 ~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~ 434 (460)
T PRK13237 367 QALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKHR 434 (460)
T ss_pred HHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHhH
Confidence 36777788888987432 3321111 1 1 479999965 38999999999999999873
No 239
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=99.81 E-value=2.4e-18 Score=162.25 Aligned_cols=351 Identities=18% Similarity=0.261 Sum_probs=243.0
Q ss_pred CCCCCCCcccccccccccc------ccHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccC
Q 011801 31 FHPTQNPGGVIQLGLAENQ------LCFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRG 104 (477)
Q Consensus 31 ~~~~~~~~~~i~l~~~~n~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g 104 (477)
|..+.||.+ |+||.+... +-.+-+.++-++... .+..--|-+..|+++|.+..+++.-..-.
T Consensus 46 fk~D~n~~K-iNLgvGaYRdd~gKp~vL~~VrkAE~ql~~-----------~~ldKEYlpI~Gl~eF~k~sakLa~G~~s 113 (427)
T KOG1411|consen 46 FKKDPNPKK-INLGVGAYRDDNGKPYVLPSVRKAEQQLAS-----------LSLDKEYLPITGLAEFNKLSAKLALGDNS 113 (427)
T ss_pred HhcCCCcce-eeecccceecCCCCeeeeHHHHHHHHHHhh-----------hcccchhccccchHHHHHHHHHHhhcCCc
Confidence 445778877 899886422 223444444332111 11223688999999999999998642111
Q ss_pred CCCccCCCcEEE--eCChHHHHHHHHHHh--cCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHH
Q 011801 105 GRVTFDPDRIVM--GGGATGANELIMFCL--ANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEA 180 (477)
Q Consensus 105 ~~~~~~~~~i~~--t~G~t~al~~i~~~l--~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~ 180 (477)
. .+..++|+. |-++|+|+.+....| .-++..|.+|+|+|.......... |+.+..+.......-++|.+.+.+
T Consensus 114 ~--~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~a-g~~~~~yrYyd~~t~gld~~g~le 190 (427)
T KOG1411|consen 114 P--VIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDA-GLPVKFYRYYDPKTRGLDFKGMLE 190 (427)
T ss_pred h--hhhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCcccccc-CcceeeeeeccccccccchHHHHH
Confidence 0 123445655 456888888777665 357899999999999988888776 998877776544566788888877
Q ss_pred HHHHHHHhCCCeeEEEE--eCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCC--CCcccHHHhhhhccCC
Q 011801 181 AYERAQEASINIKGLII--TNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSS--PKFTSVAEVIQEMDCN 256 (477)
Q Consensus 181 ~~~~~~~~~~~~k~vii--~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~--~~~~s~~~~~~~~~~~ 256 (477)
.+.++.. ..+++ .+.|||||.--+.|++++|.++.++++.+-+.|-+|.++.-++ ..-.++.-+++ .
T Consensus 191 dl~~~p~-----gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~----~ 261 (427)
T KOG1411|consen 191 DLGEAPE-----GSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVE----D 261 (427)
T ss_pred HHhcCCC-----CcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHH----c
Confidence 7766422 22333 3559999999999999999999999999999999999853222 11123333333 4
Q ss_pred CCcEEEEecCCcccCCCCceEEEE--EeCCHHH----HHHHHHh-ccc-CCCchHHHHHHHHhcCChhhHHHHHHH---H
Q 011801 257 RDLIHIIYSLSKDMGLPGFRVGIV--YSFNDTV----VNCGRKM-SSF-GLVSSQTQYLLASMLSDDEFVDNFLVE---T 325 (477)
Q Consensus 257 ~~~viiv~SlSK~~g~~G~RvG~i--~~~~~~i----~~~~~~~-~~~-~~vs~~~q~~~~~~L~~~~~~~~~~~~---~ 325 (477)
...+++..|++|.||+.|-|+|.+ ++.+... ...++.. ++. ...+.-...+++.+|+|.++-.+|+.+ +
T Consensus 262 g~~~~laQSyAKNMGLYgERvGa~svvc~~ad~A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~l~~~W~~evk~M 341 (427)
T KOG1411|consen 262 GHEILLAQSYAKNMGLYGERVGALSVVCKDADEAKRVESQLKILIRPMYSNPPLHGARIVATILSDPDLKNQWLGEVKGM 341 (427)
T ss_pred CCceEeehhhhhhcchhhhccceeEEEecCHHHHHHHHHHHHHHhcccccCCCccchhhhhhccCChHHHHHHHHHHHHH
Confidence 467888999999999999999985 5544332 2222222 222 223334667788999998765666555 4
Q ss_pred HHHHHHHHHHHHHHHhhCC----CeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEE
Q 011801 326 SKRLAKRHHNFTKGLEQVG----INCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWF 401 (477)
Q Consensus 326 ~~~l~~r~~~l~~~L~~~g----i~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~ 401 (477)
.+|+...|+.|.+.|+..| +.....+-|+|++-.+.+ +....+.+++.|.+. .+|
T Consensus 342 adRi~~mR~~L~d~L~~~gs~~~W~hI~~QIGMF~fTgl~p-----------eQv~~l~ke~~iYmT--------~dG-- 400 (427)
T KOG1411|consen 342 ADRIISMRQQLFDALEKEGSPGNWSHITKQIGMFCFTGLNP-----------EQVDWLTKEYHIYLT--------KDG-- 400 (427)
T ss_pred HHhhhhhHHHHhHHhhcCCCCccHHHHHHhhheeeecCCCH-----------HHHHHHHhhheeeec--------cCc--
Confidence 6788888999999998875 333456778999877763 356778888888874 233
Q ss_pred EEEeccCCHHHHHHHHHHHHHHHhh
Q 011801 402 RVCFANMDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 402 Rl~~~~~~~e~l~~~l~~l~~~~~~ 426 (477)
||+++.++...+..+.++|.++.+.
T Consensus 401 RiS~aG~ss~nV~yLa~aih~vtk~ 425 (427)
T KOG1411|consen 401 RISMAGLSSSNVPYLADAIHAVTKN 425 (427)
T ss_pred eEeeccccccCCcccchhhHhHhcC
Confidence 9999998888888888888877643
No 240
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.81 E-value=2.7e-17 Score=166.30 Aligned_cols=211 Identities=13% Similarity=0.083 Sum_probs=141.0
Q ss_pred HHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHH----HhhhCCcEEEEEe
Q 011801 89 PEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRD----LSWRTGVQIVPVH 164 (477)
Q Consensus 89 ~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~----~~~~~g~~~~~v~ 164 (477)
.+.++++++.+....+ .++.++ ++++++|+..++.+++++||.|+++.|.|+++... ++.. |+++..++
T Consensus 63 nPt~~~Le~~la~le~-----~~~~v~-~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~-Gi~v~~vd 135 (395)
T PRK05967 63 TPTTDALCKAIDALEG-----SAGTIL-VPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRL-GVEVEYYD 135 (395)
T ss_pred ChHHHHHHHHHHHHhC-----CCCEEE-ECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhc-CeEEEEeC
Confidence 4444445544443222 234454 45578999999999999999999999999987643 3444 88888775
Q ss_pred ccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcc
Q 011801 165 CDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFT 244 (477)
Q Consensus 165 ~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~ 244 (477)
.+ +.+++++++++ ++|+|++++|+||++.+. ++++|+++|+++|+++|+|++|+..++-.
T Consensus 136 ~~-------~~e~l~~al~~------~TklV~lesPsNP~l~v~---dl~~I~~la~~~g~~vvVD~t~a~p~~~~---- 195 (395)
T PRK05967 136 PE-------IGAGIAKLMRP------NTKVVHTEAPGSNTFEMQ---DIPAIAEAAHRHGAIVMMDNTWATPLYFR---- 195 (395)
T ss_pred CC-------CHHHHHHhcCc------CceEEEEECCCCCCCcHH---HHHHHHHHHHHhCCEEEEECCccCceecC----
Confidence 32 24667777754 789999999999976554 59999999999999999999997432221
Q ss_pred cHHHhhhhccCCCCcEEEEecCCcccC-CCCceEEEEEeCCHHHHHHHH-Hhccc-CCCchHHHHHHHHhcCChhhHHHH
Q 011801 245 SVAEVIQEMDCNRDLIHIIYSLSKDMG-LPGFRVGIVYSFNDTVVNCGR-KMSSF-GLVSSQTQYLLASMLSDDEFVDNF 321 (477)
Q Consensus 245 s~~~~~~~~~~~~~~viiv~SlSK~~g-~~G~RvG~i~~~~~~i~~~~~-~~~~~-~~vs~~~q~~~~~~L~~~~~~~~~ 321 (477)
+ . ..+..+++.|++|.++ ..+.-.|+++.+++ ..+.+. .+... ..+++...+.+..-|+.-
T Consensus 196 p-l--------~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~~-~~~~l~~~~~~~G~~~~p~da~l~~rgl~Tl------ 259 (395)
T PRK05967 196 P-L--------DFGVDISIHAATKYPSGHSDILLGTVSANEK-CWPQLLEAHGTLGLCAGPDDTYQILRGLRTM------ 259 (395)
T ss_pred h-h--------HcCCCEEEEecccccCCCCCeeEEEEEcCHH-HHHHHHHHHHHcCCCCCHHHHHHHHcCcccH------
Confidence 1 1 2245588999999964 33477887766443 322222 22222 235666666666655553
Q ss_pred HHHHHHHHHHHHHHHHHHHhhC
Q 011801 322 LVETSKRLAKRHHNFTKGLEQV 343 (477)
Q Consensus 322 ~~~~~~~l~~r~~~l~~~L~~~ 343 (477)
.-+.++..++...+.+.|+++
T Consensus 260 -~lR~~~~~~na~~lA~~L~~h 280 (395)
T PRK05967 260 -GIRLEHHRKSALEIARWLEGR 280 (395)
T ss_pred -HHHHHHHHHHHHHHHHHHHhC
Confidence 233344556666677778765
No 241
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.81 E-value=2.4e-17 Score=169.01 Aligned_cols=291 Identities=17% Similarity=0.153 Sum_probs=185.2
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhc---------CC-CCeEEEcCCCccch-HHHHhhhC
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLA---------NP-GDAFLVPSPYYAAF-DRDLSWRT 156 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~---------~~-Gd~vlv~~P~y~~~-~~~~~~~~ 156 (477)
..++.+.++++++ .+.+++++++++|++.++..+. .+ .+.|+...-+|.+. ...+...
T Consensus 81 ~~~l~~~l~~~~~----------~~~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~- 149 (401)
T TIGR01885 81 FGEFAEYVTKLFG----------YDKVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMS- 149 (401)
T ss_pred HHHHHHHHHhhcC----------CCEEEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCc-
Confidence 3566666666653 3589999999999999998742 12 36777788888763 3333321
Q ss_pred Cc------------EEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHH-HHHHHHHHHHhc
Q 011801 157 GV------------QIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRD-TLKSLVSFINDK 223 (477)
Q Consensus 157 g~------------~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~-~l~~l~~~~~~~ 223 (477)
|- .++.++. .|+++|++++++. +.++.+|++..+.+++|.+.+.+ .+++|.++|++|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~---~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~ 219 (401)
T TIGR01885 150 TDPDSRTNFGPYVPGFKKIPY-------NNLEALEEALEDH---GPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKH 219 (401)
T ss_pred CCcccccccCCCCCCceEeCC-------CCHHHHHHHHHhc---CCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHc
Confidence 21 1222221 1688899888643 34677888877799999988644 699999999999
Q ss_pred CeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHH-hc-ccCCCc
Q 011801 224 NIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRK-MS-SFGLVS 301 (477)
Q Consensus 224 ~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~-~~-~~~~vs 301 (477)
|+++|+||+|.++.+.+.. .+. +.. +..++ + + ++||.++..|+|+|+++++++ +.+.++. .. .....+
T Consensus 220 ~~lli~DEv~~g~g~~G~~-~~~-~~~---~~~~d-i-~--~~gK~l~~g~~~ig~v~~~~~-i~~~~~~~~~~~t~~~~ 289 (401)
T TIGR01885 220 NVLLIADEIQTGLGRTGKL-LCV-DHE---NVKPD-I-V--LLGKALSGGVYPVSAVLADDD-VMLTIKPGEHGSTYGGN 289 (401)
T ss_pred CCEEEEechhhCCCccchh-hHH-hhc---CCCCC-E-E--EeeccccCCCCCcEEEEEcHH-HHhhccCCCCCCCCCCC
Confidence 9999999999875444432 121 111 11222 2 2 568999866699999999654 4444432 11 112246
Q ss_pred hHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeE---ecCCceEEEEeeccchhhccCchHHHHHHHH
Q 011801 302 SQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINC---LKSNAGLFFWMDLRHLLKEKTLEGEIALWRT 378 (477)
Q Consensus 302 ~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~---~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ 378 (477)
++++.++.+.|+..+ +. ...+++++..+++.+.|++++..+ ..+. |.+..+.++.... . ....+++..
T Consensus 290 p~~~~aa~a~L~~i~--~~---~l~~~~~~~~~~~~~~L~~l~~~~~~~~~g~-g~~~~i~~~~~~~--~-~~~~~l~~~ 360 (401)
T TIGR01885 290 PLACAVAVAALEVLE--EE---KLAENAEKLGEIFRDQLKKLPKPIITEVRGR-GLLNAIVIDESKT--G-RTAWDLCLK 360 (401)
T ss_pred HHHHHHHHHHHHHHH--hc---cHHHHHHHHHHHHHHHHHhccCCceeEEeec-CeeEEEEeccCcc--h-hHHHHHHHH
Confidence 778887777775321 11 223455566778888888774332 2333 4454444442110 0 112356666
Q ss_pred HHHhcCeEEeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHh
Q 011801 379 IVNDVKLNVSPGSSFQCTEPGWFRVCFAN-MDDDTLQVALNRIAAFVQ 425 (477)
Q Consensus 379 ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~-~~~e~l~~~l~~l~~~~~ 425 (477)
+. ++||.+.|+. ++.+|++... ++++++++++++|+++++
T Consensus 361 l~-~~Gv~v~~~~------~~~lRi~p~l~~t~~~i~~~l~~l~~~l~ 401 (401)
T TIGR01885 361 LK-EKGLLAKPTH------GNIIRLAPPLVITEEQLDEGLEIIKKVID 401 (401)
T ss_pred HH-hCCEEEEecC------CCEEEEeCCccCCHHHHHHHHHHHHHHhC
Confidence 65 5699998752 5689999854 499999999999998763
No 242
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.80 E-value=9.7e-17 Score=165.74 Aligned_cols=357 Identities=15% Similarity=0.098 Sum_probs=199.4
Q ss_pred CCCCCCccccccccc--cccc--cHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCC
Q 011801 32 HPTQNPGGVIQLGLA--ENQL--CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRV 107 (477)
Q Consensus 32 ~~~~~~~~~i~l~~~--~n~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~ 107 (477)
..+.+.+..||+..+ .+.+ +.+.+.+.+.+.-+ .+..+.......+.+..+|+.+.+..+
T Consensus 35 l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~-------------~~~~~~~~~~~~~~~~~la~~L~~~~p--- 98 (443)
T PRK08360 35 VWDIEGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTD-------------KLIHYTPIYGFPVEPLLLAEKLIEIAP--- 98 (443)
T ss_pred EEECCCCEEEEccccHhhcccCCCCHHHHHHHHHHHH-------------hccCccccccCcHHHHHHHHHHHHhCC---
Confidence 334455667887544 4444 34666666655311 111121111123455566666554322
Q ss_pred ccCCCcEEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCccchHHHHhhhCCc------------EEEEEeccCC--CCc
Q 011801 108 TFDPDRIVMGGGATGANELIMFCLA--NPGDAFLVPSPYYAAFDRDLSWRTGV------------QIVPVHCDIS--NNF 171 (477)
Q Consensus 108 ~~~~~~i~~t~G~t~al~~i~~~l~--~~Gd~vlv~~P~y~~~~~~~~~~~g~------------~~~~v~~~~~--~~f 171 (477)
..-+++++++++++|++.+++.-. .....|+...-.|++....+...+|. .+..++.... ..|
T Consensus 99 -~~~~~v~f~~sGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (443)
T PRK08360 99 -GDNPKVSFGLSGSDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPF 177 (443)
T ss_pred -CCCCEEEEcCCHHHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccc
Confidence 122689999999999999987631 22356787777787754221111121 1222222110 011
Q ss_pred c--------cCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCC-HHHHHHHHHHHHhcCeEEEecccccccccCCCC
Q 011801 172 K--------ITREALEAAYERAQEASINIKGLIITNPSNPLGTTLD-RDTLKSLVSFINDKNIHLVCDEIYAATVFSSPK 242 (477)
Q Consensus 172 ~--------i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~-~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~ 242 (477)
. -+.+.+++.+++. ..+.++++|++.--.||+|.+++ .+.+++|.++|+++|+++|+||+|.++.+.+..
T Consensus 178 ~~~~~~~~~~~~~~~~~~l~~~-~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~ 256 (443)
T PRK08360 178 GKEPGSCKMECVEYIKEKFEGE-VYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKW 256 (443)
T ss_pred cCchhhhHHHHHHHHHHHHHhc-cCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccc
Confidence 1 1133344544321 11347888777633599999887 557999999999999999999999986555542
Q ss_pred cccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhc--ccCCCchHHHHHHHHhcCChhhHHH
Q 011801 243 FTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMS--SFGLVSSQTQYLLASMLSDDEFVDN 320 (477)
Q Consensus 243 ~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~--~~~~vs~~~q~~~~~~L~~~~~~~~ 320 (477)
.+.... . ..++ + -+|||.+| +|+|+||++++++ +.+.+.... .....+++.+.++.+.|+.-+- +
T Consensus 257 -~a~~~~-~---~~pD-i---itlsK~l~-~G~pigav~~~~~-i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~l~~-~- 323 (443)
T PRK08360 257 -FAIEHF-G---VEPD-I---ITLGKPLG-GGLPISATIGRAE-IMDSLPPLAHAFTLSGNPVASAAALAVIEEIEE-K- 323 (443)
T ss_pred -hhhhhc-C---CCCC-E---EEeccccc-CCceeEEEEEcHH-HHhhhcCCCCCCCCCcCHHHHHHHHHHHHHHHH-c-
Confidence 221111 1 1233 2 27799999 9999999999654 444443221 1122566777777777653210 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh----CCCeEecCCceEEEEeeccchhh--ccCchHHHHHHHHHHHhcCeEEeCCCCCC
Q 011801 321 FLVETSKRLAKRHHNFTKGLEQ----VGINCLKSNAGLFFWMDLRHLLK--EKTLEGEIALWRTIVNDVKLNVSPGSSFQ 394 (477)
Q Consensus 321 ~~~~~~~~l~~r~~~l~~~L~~----~gi~~~~~~~g~~~~~~l~~~~~--~~~~~~e~~l~~~ll~~~gI~v~pg~~f~ 394 (477)
...+++++.-+++.+.|++ .++......-|+++-+++..... .........++..++ ++||.+.+..
T Consensus 324 ---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~--- 396 (443)
T PRK08360 324 ---NLLKRAEKLGNYTKKRLEEMKKKHELIGDVRGIGLMIGVDLVKDRETKERAYEEAAKVVWRAW-ELGLIVTFFS--- 396 (443)
T ss_pred ---CHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEecCCcccCccHHHHHHHHHHHH-HCCeEEeecC---
Confidence 1122333333444444433 23221223356777777642111 111111124555555 5699986531
Q ss_pred CCCCCEEEEEecc-CCHHHHHHHHHHHHHHHhhhhc
Q 011801 395 CTEPGWFRVCFAN-MDDDTLQVALNRIAAFVQQDKE 429 (477)
Q Consensus 395 ~~~~~~~Rl~~~~-~~~e~l~~~l~~l~~~~~~~~~ 429 (477)
...+|++.+. +++++++++++++.+++...+.
T Consensus 397 ---~~~lr~~P~l~~t~~~id~~~~~l~~~l~~~~~ 429 (443)
T PRK08360 397 ---GNVLRIQPPLTIEKEVLDEGLDILEEAIEDVEE 429 (443)
T ss_pred ---CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 3579997765 4999999999999999976544
No 243
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.80 E-value=3.4e-17 Score=166.79 Aligned_cols=177 Identities=19% Similarity=0.260 Sum_probs=132.4
Q ss_pred CCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCCccchHHHHhhhCCcEEEEEe
Q 011801 86 HGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCL-ANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVH 164 (477)
Q Consensus 86 ~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l-~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~ 164 (477)
.+..+|++++|++++. ++.++++|+++|+.+++.++ .++||.|+++.|+|..+...+... |++++.++
T Consensus 29 ~~~~~le~~la~~~g~----------~~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~~~~~~~~~~-G~~~~~~~ 97 (380)
T TIGR03588 29 PTVPAFEEALAEYVGA----------KYAVAFNSATSALHIACLALGVGPGDRVWTTPITFVATANCALYC-GAKVDFVD 97 (380)
T ss_pred hhHHHHHHHHHHHHCC----------CeEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHHHc-CCEEEEEe
Confidence 4578999999999972 34566778899999999998 789999999999999988877776 99999999
Q ss_pred ccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEeccccccc-ccCCCCc
Q 011801 165 CDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAAT-VFSSPKF 243 (477)
Q Consensus 165 ~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~-~~~~~~~ 243 (477)
++. +++.+|++++++++++. ...++++|+++ |++|...+ +++|.++|+++|++||+|++++.. .+++...
T Consensus 98 ~~~-~~~~~d~~~l~~~i~~~--~~~~t~~v~~~---~~~G~~~~---~~~i~~l~~~~~~~lI~D~a~a~g~~~~~~~~ 168 (380)
T TIGR03588 98 IDP-DTGNIDEDALEKKLAAA--KGKLPKAIVPV---DFAGKSVD---MQAIAALAKKHGLKIIEDASHALGAEYGGKPV 168 (380)
T ss_pred cCC-CcCCcCHHHHHHHhhcc--cCCCceEEEEe---CCCCccCC---HHHHHHHHHHcCCEEEEECCCcccCccCCEeC
Confidence 865 35789999999998631 01278888765 56898877 788889999999999999999842 2332211
Q ss_pred ccHHHhhhhccCCCCcEEEEecCC--cccCCCCceEEEEEeCCHHHHHHHHHh
Q 011801 244 TSVAEVIQEMDCNRDLIHIIYSLS--KDMGLPGFRVGIVYSFNDTVVNCGRKM 294 (477)
Q Consensus 244 ~s~~~~~~~~~~~~~~viiv~SlS--K~~g~~G~RvG~i~~~~~~i~~~~~~~ 294 (477)
.+ . ....+.+.|++ |.++.+ ..|+++..++.+.+.++.+
T Consensus 169 g~----~------~~~d~~~~S~~~~K~~~~~--~GG~v~~~~~~~~~~~~~~ 209 (380)
T TIGR03588 169 GN----C------RYADATVFSFHPVKIITTA--EGGAVTTNDEELAERMRLL 209 (380)
T ss_pred CC----c------cccceEEEecCCCCccccc--CceEEEECCHHHHHHHHHH
Confidence 10 0 01135667776 888633 5788888777776655443
No 244
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.79 E-value=6.3e-17 Score=165.52 Aligned_cols=340 Identities=15% Similarity=0.097 Sum_probs=201.8
Q ss_pred CCCCccccccccc--cccc--cHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCcc
Q 011801 34 TQNPGGVIQLGLA--ENQL--CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTF 109 (477)
Q Consensus 34 ~~~~~~~i~l~~~--~n~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~ 109 (477)
+.+.+.+||+..+ .+.+ +.+.+.+++++.-+ .+..+... -..+....+++.+.+..+
T Consensus 36 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~-------------~~~~~~~~-~~~~~~~~la~~L~~~~~----- 96 (408)
T PRK04612 36 DDQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAG-------------KLWHTSNV-FYSAPPLKLAEELVTASR----- 96 (408)
T ss_pred ECCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHH-------------hccccccc-cCCHHHHHHHHHHHhhCC-----
Confidence 3445667888544 3334 34666666665321 11111111 112344556666554321
Q ss_pred CCCcEEEeCChHHHHHHHHHHhc------C--CC-CeEEEcCCCccchHHHHhhhCCcEEEE---EeccCC---CCcccC
Q 011801 110 DPDRIVMGGGATGANELIMFCLA------N--PG-DAFLVPSPYYAAFDRDLSWRTGVQIVP---VHCDIS---NNFKIT 174 (477)
Q Consensus 110 ~~~~i~~t~G~t~al~~i~~~l~------~--~G-d~vlv~~P~y~~~~~~~~~~~g~~~~~---v~~~~~---~~f~i~ 174 (477)
..+++++++++++|++.+++... + ++ .+|+....+|++....+...+|..... -+.... -.|. |
T Consensus 97 ~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-d 175 (408)
T PRK04612 97 FAEKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFN-D 175 (408)
T ss_pred CCCEEEEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCC-C
Confidence 12689999999999999986632 1 12 368888888887654332221211100 000000 0111 6
Q ss_pred HHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCC--HHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhh
Q 011801 175 REALEAAYERAQEASINIKGLIITNPSNPLGTTLD--RDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQE 252 (477)
Q Consensus 175 ~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~--~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~ 252 (477)
.++++++++. +..+.++..|.+++|-+++ .+.+++|.++|+++|+++|+||+|.++...+..+ . ..
T Consensus 176 ~~~l~~~~~~------~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~-a--~~--- 243 (408)
T PRK04612 176 VEALEAAMAG------GDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLF-A--HW--- 243 (408)
T ss_pred HHHHHHhhCC------CCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchh-h--hh---
Confidence 7888877742 3345677789888887665 6689999999999999999999999765544321 1 11
Q ss_pred ccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHh--cccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHH
Q 011801 253 MDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKM--SSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLA 330 (477)
Q Consensus 253 ~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~--~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~ 330 (477)
..+.+..+.||||.+| +|+|+|+++++++ +.+.+... ...+..+++++.++.+.|+.-+ + .+..++++
T Consensus 244 ---~~~~~pdi~t~~K~l~-~G~piga~~~~~~-~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~--~---~~l~~~~~ 313 (408)
T PRK04612 244 ---QEQVTPDIVTLAKALG-GGFPIGAMLAGPK-VAETMQFGAHGTTFGGNPLAAAVARVALRKLA--S---PQIAANVA 313 (408)
T ss_pred ---hcCCCCCEEEEcchhc-CCCceEEEEECHH-HHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHH--h---ccHHHHHH
Confidence 2244556779999999 9999999998654 44443321 1122367788888887775321 1 12233444
Q ss_pred HHHHHHHHHHhhC----CCeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEec
Q 011801 331 KRHHNFTKGLEQV----GINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFA 406 (477)
Q Consensus 331 ~r~~~l~~~L~~~----gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~ 406 (477)
++-+++.+.|+++ ++......-|+++.+.+..... ....++.+. +.++||.+.|. +++.+|++..
T Consensus 314 ~~g~~l~~~l~~l~~~~~~i~~vrg~Gl~~~i~~~~~~~----~~a~~i~~~-l~~~Gvlv~~~------g~~~lRl~Pp 382 (408)
T PRK04612 314 RQSAALRAGLEALNAEFGVFAQVRGRGLMLGAVLAPAHA----GQAGAILDL-AAEHGLLLLQA------GPDVLRFVPA 382 (408)
T ss_pred HHHHHHHHHHHHHHhhCCCeeeeeccceEEEEEecCchh----hHHHHHHHH-HHHCCeEEeeC------CCCEEEEcCC
Confidence 4445555555443 3221223346777777752100 111234444 44669999763 2467999986
Q ss_pred c-CCHHHHHHHHHHHHHHHhh
Q 011801 407 N-MDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 407 ~-~~~e~l~~~l~~l~~~~~~ 426 (477)
. ++++++++++++|++.+.+
T Consensus 383 l~it~eeid~~l~~l~~~l~~ 403 (408)
T PRK04612 383 LNLTDAELADGLARLRLALAD 403 (408)
T ss_pred ccCCHHHHHHHHHHHHHHHHH
Confidence 5 4999999999999999875
No 245
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.79 E-value=4.2e-17 Score=167.56 Aligned_cols=275 Identities=11% Similarity=0.093 Sum_probs=175.4
Q ss_pred cCCCcEEEeCChHHHHHHHHHHhcCCC---CeEEEcCCCccchHH----HHhhhCCcEE----EEEeccCCCCcccCHHH
Q 011801 109 FDPDRIVMGGGATGANELIMFCLANPG---DAFLVPSPYYAAFDR----DLSWRTGVQI----VPVHCDISNNFKITREA 177 (477)
Q Consensus 109 ~~~~~i~~t~G~t~al~~i~~~l~~~G---d~vlv~~P~y~~~~~----~~~~~~g~~~----~~v~~~~~~~f~i~~~~ 177 (477)
.++++|++|+|+|+++++++..+.++| +.|++....|+.... .++.. |+++ +.++.+ .++.+++++
T Consensus 84 ~~~~~v~~~~~~t~~l~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~-g~~~~~~~~~~~~~--~~g~~~~~~ 160 (406)
T TIGR01814 84 AKEDEVVVMNTLTINLHLLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLH-GLTVEESMVQIEPR--EEETLRLED 160 (406)
T ss_pred CCCCcEEEeCCchHHHHHHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhc-CCCcccceEEeccC--CCCccCHHH
Confidence 578999999999999999998876664 368888888987322 23334 8776 445443 345678999
Q ss_pred HHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCC
Q 011801 178 LEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNR 257 (477)
Q Consensus 178 l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~ 257 (477)
++++++.. +.++++|++++++|.||.+++ +++|.++|+++|+++++|++++. +.-+ ..+. ..
T Consensus 161 l~~~~~~~---~~~t~lv~~~~v~~~tG~~~~---~~~i~~~~~~~g~~~~vD~aq~~---G~~~-id~~--------~~ 222 (406)
T TIGR01814 161 ILDTIEKN---GDDIAVILLSGVQYYTGQLFD---MAAITRAAHAKGALVGFDLAHAV---GNVP-LDLH--------DW 222 (406)
T ss_pred HHHHHHhc---CCCeEEEEEeccccccceecC---HHHHHHHHHHcCCEEEEEccccc---CCcc-cccc--------cC
Confidence 99887642 347899999999999999999 88899999999999999999983 3222 2221 22
Q ss_pred CcEEEEecCCcccC-CCCceEEEEEeCCHHHHHHHHHhcc------------------------cCCCchHHHHHHHHhc
Q 011801 258 DLIHIIYSLSKDMG-LPGFRVGIVYSFNDTVVNCGRKMSS------------------------FGLVSSQTQYLLASML 312 (477)
Q Consensus 258 ~~viiv~SlSK~~g-~~G~RvG~i~~~~~~i~~~~~~~~~------------------------~~~vs~~~q~~~~~~L 312 (477)
+..+++.|.+|.++ -|| |.++..++........... .++.+...-.++...|
T Consensus 223 gvD~~~~s~hK~l~g~pG---~~l~v~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al 299 (406)
T TIGR01814 223 GVDFACWCTYKYLNAGPG---AGAFVHEKHAHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSL 299 (406)
T ss_pred CCCEEEEcCccccCCCCC---eEEEEehhhhhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHH
Confidence 45588899999873 345 4344333332221100000 1223333333333333
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-----CCeEecCCc----eEEEEeeccchhhccCchHHHHHHHHHHHhc
Q 011801 313 SDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-----GINCLKSNA----GLFFWMDLRHLLKEKTLEGEIALWRTIVNDV 383 (477)
Q Consensus 313 ~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-----gi~~~~~~~----g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~ 383 (477)
+--. +.-+++.+++.++..+++.+.|++. |+++..+.. +..+.+.++ .+. .++.+.+ .++
T Consensus 300 ~~~~--~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~--~~~------~~~~~~L-~~~ 368 (406)
T TIGR01814 300 DIFD--QAGMEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHP--VPG------KAVFQAL-IKR 368 (406)
T ss_pred HHHH--hcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEec--CCH------HHHHHHH-HHC
Confidence 2110 1113455666777777788877664 366654421 223445554 111 1355555 456
Q ss_pred CeEEeCCCCCCCCCCCEEEEEe-ccC-CHHHHHHHHHHHHHHH
Q 011801 384 KLNVSPGSSFQCTEPGWFRVCF-ANM-DDDTLQVALNRIAAFV 424 (477)
Q Consensus 384 gI~v~pg~~f~~~~~~~~Rl~~-~~~-~~e~l~~~l~~l~~~~ 424 (477)
||.+... .++.+|+|+ +.. ++++++.+++.|++++
T Consensus 369 gi~v~~~------~~~~iRiS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 369 GVIGDKR------EPSVIRVAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred CEEEecc------CCCeEEEechhccCCHHHHHHHHHHHHHHh
Confidence 9987532 246899999 444 9999999999998875
No 246
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.79 E-value=3.1e-16 Score=161.38 Aligned_cols=291 Identities=12% Similarity=0.094 Sum_probs=177.9
Q ss_pred CCcEEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCccchHHHHhhhCCcE-------------EEEEeccCCC-C--cc
Q 011801 111 PDRIVMGGGATGANELIMFCLA--NPGDAFLVPSPYYAAFDRDLSWRTGVQ-------------IVPVHCDISN-N--FK 172 (477)
Q Consensus 111 ~~~i~~t~G~t~al~~i~~~l~--~~Gd~vlv~~P~y~~~~~~~~~~~g~~-------------~~~v~~~~~~-~--f~ 172 (477)
.+++++++++++|++.+++.-. ....+|+...-+|++....+...+|.. +..++..... + ..
T Consensus 101 ~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 180 (421)
T PRK06777 101 PAKTAFFTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVE 180 (421)
T ss_pred CceEEEeCCcHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHH
Confidence 3689999999999999887531 223568888888888754332221210 1111211100 0 01
Q ss_pred cCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCccc-CCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhh
Q 011801 173 ITREALEAAYERAQEASINIKGLIITNPSNPLGT-TLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQ 251 (477)
Q Consensus 173 i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~-~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~ 251 (477)
-+++.+++.+++. ....++.+|++.--.+..|. +.+.+.+++|.++|+++|+++|+||+|.++.+.+.. .+....
T Consensus 181 ~~~~~l~~~~~~~-~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~-~~~~~~-- 256 (421)
T PRK06777 181 EALSSVERLFKAD-IAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKL-FAMEYY-- 256 (421)
T ss_pred HHHHHHHHHHHhc-cCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCch-hhhhhc--
Confidence 1245566655421 01235777666544677885 678999999999999999999999999986565532 222211
Q ss_pred hccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHh---cccCCCchHHHHHHHHhcCChhhHHHHHHHHHHH
Q 011801 252 EMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKM---SSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKR 328 (477)
Q Consensus 252 ~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~---~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~ 328 (477)
+..+| + -++||.+| +|+|+||+++++ .+.+.+... ..+ ..+++++.++.+.|+..+ + .+..++
T Consensus 257 --~~~pD--i--v~~sK~l~-~G~pigav~~~~-~i~~~~~~~~~~~T~-~~~p~~~aaa~a~L~~~~---~--~~l~~~ 322 (421)
T PRK06777 257 --DVKPD--L--ITMAKSLG-GGMPISAVVGRA-EVMDAPAPGGLGGTY-AGNPLAVAAALAVLDVIA---E--EKLCQR 322 (421)
T ss_pred --CCCCC--E--Eeeehhhc-CCCceEEEEEcH-HHHhccCCCCCCCCC-CcCHHHHHHHHHHHHHHH---h--ccHHHH
Confidence 11233 2 27999999 999999999964 454443321 223 367888888888885321 1 233445
Q ss_pred HHHHHHHHHHHHhhC----C-CeEecCCceEEEEeeccchh-hccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEE
Q 011801 329 LAKRHHNFTKGLEQV----G-INCLKSNAGLFFWMDLRHLL-KEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFR 402 (477)
Q Consensus 329 l~~r~~~l~~~L~~~----g-i~~~~~~~g~~~~~~l~~~~-~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~R 402 (477)
++++.+++.++|+++ + +....+.+.+| .+.+.... .....+-...+...++ +.||.+.|+..|+ +++|
T Consensus 323 ~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~-~i~~~~~~~~~~~~~~~~~l~~~~~-~~Gv~i~~~~~~g----~~lr 396 (421)
T PRK06777 323 ALILGAHLVEVLEKAKASCPAIVDIRARGSMV-AVEFNDPQTGKPSPEFTRQYQRQAL-EEGLLLLSCGVHG----NVIR 396 (421)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEecCceEEE-EEEEecCccCCccHHHHHHHHHHHH-hCCeEEeecCCCC----CEEE
Confidence 556666666666553 2 33345566555 44443210 0001111123344444 4699999987663 5899
Q ss_pred EEecc-CCHHHHHHHHHHHHHHHh
Q 011801 403 VCFAN-MDDDTLQVALNRIAAFVQ 425 (477)
Q Consensus 403 l~~~~-~~~e~l~~~l~~l~~~~~ 425 (477)
+++.. ++++++++++++|.+++.
T Consensus 397 ~~ppl~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 397 FLYPLTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred EeCCCCCCHHHHHHHHHHHHHHHh
Confidence 99974 499999999999999874
No 247
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.79 E-value=2.6e-16 Score=161.79 Aligned_cols=356 Identities=11% Similarity=0.054 Sum_probs=198.6
Q ss_pred CCCCCccccccccc--cccc--cHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCc
Q 011801 33 PTQNPGGVIQLGLA--ENQL--CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVT 108 (477)
Q Consensus 33 ~~~~~~~~i~l~~~--~n~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~ 108 (477)
.+.+.+..||+..+ ...+ +.+.+.+.+++.-+ .+..+.......+....+|+.+.+..+.
T Consensus 35 ~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~-------------~l~~~~~~~~~~~~~~~la~~l~~~~p~--- 98 (425)
T PRK07495 35 WDKEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLD-------------RFTHTCHQVVPYENYVRLAERLNALVPG--- 98 (425)
T ss_pred EeCCCCEEEEccccHHhhccCCCCHHHHHHHHHHHh-------------hccCcccCccCCHHHHHHHHHHHHhCCC---
Confidence 34456678887544 2334 34666666665311 1111111011123444455555432210
Q ss_pred cCCCcEEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCccchHHHHhhhCCc-------------EEEEEeccCCCCccc
Q 011801 109 FDPDRIVMGGGATGANELIMFCLA--NPGDAFLVPSPYYAAFDRDLSWRTGV-------------QIVPVHCDISNNFKI 173 (477)
Q Consensus 109 ~~~~~i~~t~G~t~al~~i~~~l~--~~Gd~vlv~~P~y~~~~~~~~~~~g~-------------~~~~v~~~~~~~f~i 173 (477)
-..+++++++++++|++.+++.-. ....+|+...-+|++........+|. .++.+|.+... ..+
T Consensus 99 ~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~ 177 (425)
T PRK07495 99 DFAKKTIFVTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVEL-HGV 177 (425)
T ss_pred CCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCccc-ccc
Confidence 012589999999999999887531 22357888888888764322111110 12233332111 112
Q ss_pred C----HHHHHHHHHHHHHhCCCeeEEEEeCC-CCCcc-cCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHH
Q 011801 174 T----REALEAAYERAQEASINIKGLIITNP-SNPLG-TTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVA 247 (477)
Q Consensus 174 ~----~~~l~~~~~~~~~~~~~~k~vii~nP-~NPtG-~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~ 247 (477)
+ .+++++.+++. ..+.++.+|++.-- +| +| ...+.+.+++|.++|+++|+++|+||+|.++...+..+ ...
T Consensus 178 ~~~~~~~~l~~~~~~~-~~~~~iaavi~EPv~g~-~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~-a~~ 254 (425)
T PRK07495 178 SVEQSLAALDKLFKAD-VDPQRVAAIIIEPVQGE-GGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLF-AME 254 (425)
T ss_pred cHHHHHHHHHHHHHhc-cCCCceEEEEECCccCC-CCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCce-eec
Confidence 2 33344444321 11236777665422 45 78 45799999999999999999999999998764444321 111
Q ss_pred HhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHH--hcccCCCchHHHHHHHHh---cCChhhHHHHH
Q 011801 248 EVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRK--MSSFGLVSSQTQYLLASM---LSDDEFVDNFL 322 (477)
Q Consensus 248 ~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~--~~~~~~vs~~~q~~~~~~---L~~~~~~~~~~ 322 (477)
..+.+..+.+|||.+| +|+|+|+++++++ +.+.+.. ..+.+..+++++.++.+. +.++++ .+++
T Consensus 255 --------~~gv~pDi~tlsK~l~-~G~pigav~~~~~-i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~l-~~~~ 323 (425)
T PRK07495 255 --------HHEVAADLTTMAKGLA-GGFPLAAVTGRAE-IMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIEEEDL-CERA 323 (425)
T ss_pred --------ccCCCCCEEeehhhhc-CCccceEEEEcHH-HHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhchH-HHHH
Confidence 1123334679999998 9999999999654 4433322 112223677777754444 444443 3444
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchhh-ccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEE
Q 011801 323 VETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLK-EKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWF 401 (477)
Q Consensus 323 ~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~-~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~ 401 (477)
++..++++++.+.+.+.+. .+.-. ..-|+++|+++..... .........++..++ +.||.+.+... ..+.+
T Consensus 324 ~~~g~~l~~~L~~l~~~~~--~i~~v-rG~Gl~~~iel~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~g~----~~~~~ 395 (425)
T PRK07495 324 NQLGNRLKQRLASLRETVP--EIADI-RGPGFMNAVEFNDADSGLPSAEFANRVRLKAL-EKGLILLTCGV----HGNVI 395 (425)
T ss_pred HHHHHHHHHHHHHHHhhCC--Ceeee-ecCceEEEEEEecCCCCCccHHHHHHHHHHHH-HCCeEEeecCC----CCCEE
Confidence 4455555555444433321 12111 2337999999853211 001011123455555 56999875321 13679
Q ss_pred EEEeccC-CHHHHHHHHHHHHHHHhhh
Q 011801 402 RVCFANM-DDDTLQVALNRIAAFVQQD 427 (477)
Q Consensus 402 Rl~~~~~-~~e~l~~~l~~l~~~~~~~ 427 (477)
|+..... +++++++++++|.+++++.
T Consensus 396 r~~Ppl~it~~~id~~~~~l~~~l~~~ 422 (425)
T PRK07495 396 RFLAPITIQDDVFAEALDILEASILEA 422 (425)
T ss_pred EEeCCCccCHHHHHHHHHHHHHHHHHH
Confidence 9998764 9999999999999999764
No 248
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.79 E-value=1.1e-16 Score=163.40 Aligned_cols=310 Identities=16% Similarity=0.151 Sum_probs=193.8
Q ss_pred cHHHHHHHHHHHhcccCCCCccC-CCcEEEeCChH-HHHHHHHHHhcC---CCCeEEEcCCCccchHHHHhhhCCcEEEE
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFD-PDRIVMGGGAT-GANELIMFCLAN---PGDAFLVPSPYYAAFDRDLSWRTGVQIVP 162 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~-~~~i~~t~G~t-~al~~i~~~l~~---~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~ 162 (477)
...+.+.+.+.+.+..| ++ -...++++|+| .++.+++.++-. +||.|+++.-+|......+.+. |++++.
T Consensus 103 ~~~l~~~~e~~~~~~~G----~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~-G~~pv~ 177 (444)
T TIGR03531 103 LYKLTNKLVKDFLKLLG----LRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTA-GFEPRV 177 (444)
T ss_pred HHHHHHHHHHHHHHHcC----CCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHc-CCeEEE
Confidence 44455555555544444 22 13588888888 588887777642 5899999999999898888887 999999
Q ss_pred Eec-cCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCC
Q 011801 163 VHC-DISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSP 241 (477)
Q Consensus 163 v~~-~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~ 241 (477)
+++ ...++|.+|+++|++++++. +.+..++++++|+ |+.....+++++|.++|++||+++|+|++|+. ..+
T Consensus 178 Vd~~~d~~~~~iD~e~Le~aIt~~---~~kai~~Vv~Tp~--t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~---~~~ 249 (444)
T TIGR03531 178 IETVLDGDELTTDVEDIERAIEEI---GPDNILCVLSTTS--CFAPRSPDDIEEIAKICANYDIPHIVNNAYGL---QSN 249 (444)
T ss_pred eeeeecCcCCCcCHHHHHHHHHhc---cCCCEEEEEEcCC--cCCCcchhCHHHHHHHHHHcCCEEEEECcCcC---cCh
Confidence 985 23467999999999999742 2245566777665 55555667799999999999999999999983 111
Q ss_pred CcccHHHhhhhccCCCC-cEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhcccCCCchHHHHHHHHhcCChhhHHH
Q 011801 242 KFTSVAEVIQEMDCNRD-LIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDN 320 (477)
Q Consensus 242 ~~~s~~~~~~~~~~~~~-~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~~~~~vs~~~q~~~~~~L~~~~~~~~ 320 (477)
. ....... +...+ ..+++.|++|.+.+||. .|.+++.++.+.+.+++.......+++.|.+...++.-+ .+
T Consensus 250 ~---~~~~~~~-g~~~Grad~vv~s~hK~l~~pg~-Gg~I~~~d~el~~~i~~~y~g~~~~s~~~~~~~~ll~~G---~~ 321 (444)
T TIGR03531 250 K---YMELINK-AIKVGRVDAVVSSTDKNFMVPVG-GAIIYSFDENFIQEISKSYPGRASASPSLDVLITLLSLG---SK 321 (444)
T ss_pred h---hhhhhhc-cccccCCCeEEEeCccCCCCCCC-EEEEEECCHHHHHHHHHhccCCCCChHHHHHHHHHHHhC---HH
Confidence 1 1111110 00112 25668899999988776 455557677776666654333334557787777777543 23
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhC----CCeEecCC-ceEEEEeeccchhhccCchHHHHHHHHHHHhcCe---E-EeCCC
Q 011801 321 FLVETSKRLAKRHHNFTKGLEQV----GINCLKSN-AGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKL---N-VSPGS 391 (477)
Q Consensus 321 ~~~~~~~~l~~r~~~l~~~L~~~----gi~~~~~~-~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI---~-v~pg~ 391 (477)
.+++..++..++++++.+.|.++ |..++... ...-+-+.+.... ... -.++ -.+|...+| . |.||.
T Consensus 322 g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~-~~~---~~~~-g~~l~~~~v~g~r~v~~~~ 396 (444)
T TIGR03531 322 GYLELLKERKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTLK-GKD---PTML-GSMLYSRRVTGPRVVTNGD 396 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEeccccc-ccC---HHHH-HHHHHhCCCCCceeecCCC
Confidence 45666677777778887777654 66666432 2233334444321 111 1123 333433354 2 45665
Q ss_pred -------C---CCCCCC----CEEEEEec-cCCHHHHHHHHHHHHHH
Q 011801 392 -------S---FQCTEP----GWFRVCFA-NMDDDTLQVALNRIAAF 423 (477)
Q Consensus 392 -------~---f~~~~~----~~~Rl~~~-~~~~e~l~~~l~~l~~~ 423 (477)
. |+...+ .++=+..+ .++.++++.++++|.+.
T Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~ 443 (444)
T TIGR03531 397 SKTVGGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKS 443 (444)
T ss_pred ceEECCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhc
Confidence 2 221111 13323221 15889999999999875
No 249
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.79 E-value=5.5e-17 Score=167.34 Aligned_cols=347 Identities=13% Similarity=0.083 Sum_probs=199.1
Q ss_pred CCCCcccccccccc--ccc--cHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCcc
Q 011801 34 TQNPGGVIQLGLAE--NQL--CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTF 109 (477)
Q Consensus 34 ~~~~~~~i~l~~~~--n~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~ 109 (477)
+.+.+.+||+..+. +.+ +.+.+.+.+.+.-+. ....|....+..+|.+.+++.+.
T Consensus 46 d~dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~------------~~~~~~~~~~~~~la~~L~~~~~--------- 104 (426)
T PRK00062 46 DVDGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEK------------GLSFGAPTELEVELAELVIELVP--------- 104 (426)
T ss_pred eCCCCEEEEcccchhhhhcCCCCHHHHHHHHHHHHh------------CCcCCCCCHHHHHHHHHHHHhCC---------
Confidence 34456788987653 322 456666666553210 01122233344555555555431
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcC--CCCeEEEcCCCccchHHHHhhhCCcE----------EEEEeccCCCCcc---cC
Q 011801 110 DPDRIVMGGGATGANELIMFCLAN--PGDAFLVPSPYYAAFDRDLSWRTGVQ----------IVPVHCDISNNFK---IT 174 (477)
Q Consensus 110 ~~~~i~~t~G~t~al~~i~~~l~~--~Gd~vlv~~P~y~~~~~~~~~~~g~~----------~~~v~~~~~~~f~---i~ 174 (477)
..+++++++++++|++.+++.... .++.|+..+++|+++...+....|.. ..+.+.. .+.+. -|
T Consensus 105 ~~~~v~~~~sGseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d 183 (426)
T PRK00062 105 SIEMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFA-KHTLTAPYND 183 (426)
T ss_pred CCCEEEEecCHHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccc-cceEEcCCCC
Confidence 246899999999999999987432 35789999999999763322111110 0000000 00000 26
Q ss_pred HHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCC-HHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhc
Q 011801 175 REALEAAYERAQEASINIKGLIITNPSNPLGTTLD-RDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEM 253 (477)
Q Consensus 175 ~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~-~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~ 253 (477)
++++++.+++. ..++.+|++..-..-+|.+.+ .+.+++|.++|++||+++|+||+|.++.. +..+ . .+...
T Consensus 184 ~~~l~~~i~~~---~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~-g~~~-~-~~~~~-- 255 (426)
T PRK00062 184 LEAVEELFEEY---GDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRV-ALGG-A-QGYYG-- 255 (426)
T ss_pred HHHHHHHHHhC---CCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhcccc-CCcc-H-HHHhC--
Confidence 88888887642 236777666522333787775 88899999999999999999999987633 2221 1 12111
Q ss_pred cCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHH---hccc--CCCchHHHHHHHHhcCChhhHHHHHHHHHHH
Q 011801 254 DCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRK---MSSF--GLVSSQTQYLLASMLSDDEFVDNFLVETSKR 328 (477)
Q Consensus 254 ~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~---~~~~--~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~ 328 (477)
..+| +.+|||.+| .|+++|++++++ .+.+.+.. ...+ ...+++.+.++.+.|+-.+- ++..++.++.
T Consensus 256 -~~pD----i~~~gK~l~-~G~p~ga~~~~~-~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~-~~~~~~~~~~ 327 (426)
T PRK00062 256 -VTPD----LTTLGKIIG-GGLPVGAFGGRR-EIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKE-PGFYEELEAL 327 (426)
T ss_pred -CCcc----hHhhhhHhh-CCCcceeeeEHH-HHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhc-chHHHHHHHH
Confidence 1233 358999999 999999998854 45554431 1111 23567777777666652211 1223333333
Q ss_pred HHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchh-h------ccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEE
Q 011801 329 LAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLL-K------EKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWF 401 (477)
Q Consensus 329 l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~-~------~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~ 401 (477)
....++.|.+.+++.++.......|.++-+.+.... . .........++..++ ++||.+.|.. ++.+
T Consensus 328 ~~~~~~~l~~~~~~~~~~~~vrg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~-~~Gv~v~~~~------~~~~ 400 (426)
T PRK00062 328 TKRLAEGLKEAAKKAGIPLTVNRVGSMFGLFFTDEPVTNYADAKKSDTERFARFFHAML-DEGVYLAPSQ------FEAG 400 (426)
T ss_pred HHHHHHHHHHHHHHcCCceEEEEecceEEEEEecCCCcchhhhccccHHHHHHHHHHHH-HCCeEeecCC------cCce
Confidence 334444455544555654433234455555554210 0 000011124555555 5699998742 2346
Q ss_pred EEEeccCCHHHHHHHHHHHHHHHhh
Q 011801 402 RVCFANMDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 402 Rl~~~~~~~e~l~~~l~~l~~~~~~ 426 (477)
++++. ++++++++++++|++++++
T Consensus 401 ~~~~~-~t~~ei~~~~~~l~~~l~~ 424 (426)
T PRK00062 401 FVSAA-HTDEDIEKTLEAARKAFAA 424 (426)
T ss_pred eeecc-CCHHHHHHHHHHHHHHHHh
Confidence 77643 5999999999999999865
No 250
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.78 E-value=2.5e-16 Score=162.10 Aligned_cols=155 Identities=21% Similarity=0.292 Sum_probs=122.1
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHH----HhhhCCcEEEEE
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRD----LSWRTGVQIVPV 163 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~----~~~~~g~~~~~v 163 (477)
..+|++.+|++.+ .+..++++++++|+.+++.++++|||.|+++.+.|.+.... +... |++++.+
T Consensus 65 ~~~le~~lA~l~g----------~~~al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~-G~~v~~v 133 (427)
T PRK05994 65 NAVLEERVAALEG----------GTAALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSF-GWQVRWA 133 (427)
T ss_pred HHHHHHHHHHHhC----------CCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhc-CcEEEEE
Confidence 5788999999876 23477888889999999999999999999999999865432 4444 8988888
Q ss_pred eccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCc
Q 011801 164 HCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKF 243 (477)
Q Consensus 164 ~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~ 243 (477)
+.+ |++++++++.+ ++|+|++++|+||+|.+++ +++|.++|+++|+++|+|++++.. +...
T Consensus 134 d~~-------d~~~l~~ai~~------~tklV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~a~a~~-~~~~-- 194 (427)
T PRK05994 134 DAD-------DPASFERAITP------RTKAIFIESIANPGGTVTD---IAAIAEVAHRAGLPLIVDNTLASP-YLIR-- 194 (427)
T ss_pred CCC-------CHHHHHHhcCc------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCcccc-ccCC--
Confidence 742 67888888753 7899999999999999998 788899999999999999999732 1111
Q ss_pred ccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEe
Q 011801 244 TSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYS 282 (477)
Q Consensus 244 ~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~ 282 (477)
++ ..+..+++.|++|.+|-+|-.+|.+++
T Consensus 195 -pl---------~~gaDivv~S~tK~lgg~~~~~gG~v~ 223 (427)
T PRK05994 195 -PI---------EHGADIVVHSLTKFLGGHGNSMGGIIV 223 (427)
T ss_pred -cc---------ccCCcEEEEcCccccCCCCCcEEEEEE
Confidence 11 123447889999999866766776554
No 251
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.78 E-value=1.4e-16 Score=165.68 Aligned_cols=298 Identities=14% Similarity=0.157 Sum_probs=184.4
Q ss_pred HHHHHHHHHhcccCCCCccCCCcEEEe---CChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhh-------C--Cc
Q 011801 91 FRQAVAKFMGKGRGGRVTFDPDRIVMG---GGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWR-------T--GV 158 (477)
Q Consensus 91 lr~aia~~~~~~~g~~~~~~~~~i~~t---~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~-------~--g~ 158 (477)
.|+.++++++ .+++++.++ +|+++|+.+++.+|+++||.|++....+++........ . +.
T Consensus 85 ar~~~a~lf~--------a~~~~~~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~ 156 (452)
T PTZ00094 85 CQKRALEAFG--------LDPEEWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYF 156 (452)
T ss_pred HHHHHHHHhC--------CCcccceeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeee
Confidence 3456667765 456777666 78999999999999999999999877776654322110 0 13
Q ss_pred EEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEeccccccccc
Q 011801 159 QIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVF 238 (477)
Q Consensus 159 ~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~ 238 (477)
++.+++++. +..+|+++|++++++. +++.|++. ++.+|...+ +++|.++|+++|+++++|++++....
T Consensus 157 ~~~~~~~~~--~g~id~~~L~~~l~~~-----~~~lvi~~--~s~~g~~~d---i~~I~~i~~~~ga~l~vDaaq~~G~i 224 (452)
T PTZ00094 157 ESLPYQVNE--KGLIDYDKLEELAKAF-----RPKLIIAG--ASAYPRDID---YKRFREICDSVGAYLMADIAHTSGLV 224 (452)
T ss_pred eeeecccCC--CCCcCHHHHHHHHHHh-----CCCEEEEe--CCCCCCccC---HHHHHHHHHHcCCEEEEeccchhccc
Confidence 344555553 3578999999998753 56666654 335999999 77777888999999999999974333
Q ss_pred CCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhc-----cc-CCCchHHHHHHHHhc
Q 011801 239 SSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMS-----SF-GLVSSQTQYLLASML 312 (477)
Q Consensus 239 ~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~-----~~-~~vs~~~q~~~~~~L 312 (477)
....+ + . + ..+..+++.|++|+++ |.+.|++++.++.......+.. .+ ++.+.....++...+
T Consensus 225 ~~~~~-~---~-~----~~~~D~l~~S~hK~l~--GP~Gg~l~~~~~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al 293 (452)
T PTZ00094 225 AAGVL-P---S-P----FPYADVVTTTTHKSLR--GPRSGLIFYRKKVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQL 293 (452)
T ss_pred cCCCC-C---C-C----CCCCcEEEcCCccCCC--CCCceEEEEecccchHHHHhhccccCCCCCCCchHHHHHHHHHHH
Confidence 22110 0 0 0 1134478899999872 3335888875543221111111 11 112222223333333
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCc-eEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEe-CC
Q 011801 313 SDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNA-GLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVS-PG 390 (477)
Q Consensus 313 ~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~-g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~-pg 390 (477)
..- .....++.++++.+..+++.+.|.+.|+++..+.. ....++.+... .... +.+..++++.||.+. +|
T Consensus 294 ~~~--~~~~~~~~~~~i~~l~~~l~~~L~~~g~~v~~~~~~~~~~~v~~~~~----~~~~--~~~~~~L~~~gI~vs~~~ 365 (452)
T PTZ00094 294 KEV--QSPEWKEYAKQVLKNAKALAAALEKRGYDLVTGGTDNHLVLVDLRPF----GITG--SKMEKLLDAVNISVNKNT 365 (452)
T ss_pred HHH--hChhHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCCCceEeecCCcC----CCCH--HHHHHHHHHCCcEEeccc
Confidence 211 01223556678888889999999888887764221 12344444321 1111 244556677899994 44
Q ss_pred CCCCC--CCCCEEEEEeccCC-----HHHHHHHHHHHHHHHhhh
Q 011801 391 SSFQC--TEPGWFRVCFANMD-----DDTLQVALNRIAAFVQQD 427 (477)
Q Consensus 391 ~~f~~--~~~~~~Rl~~~~~~-----~e~l~~~l~~l~~~~~~~ 427 (477)
..+.. ..++++|+++..++ +++++.+++.|+++++..
T Consensus 366 ~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~~~~~ 409 (452)
T PTZ00094 366 IPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLDRAVKLA 409 (452)
T ss_pred CCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHHHHHHH
Confidence 44331 23579999996553 899999999999998753
No 252
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.78 E-value=7.1e-16 Score=152.62 Aligned_cols=284 Identities=17% Similarity=0.226 Sum_probs=207.0
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccc--hHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhC
Q 011801 112 DRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAA--FDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEAS 189 (477)
Q Consensus 112 ~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~--~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~ 189 (477)
+-+++++++|.+++.++..++.|||+||+..-...+ +.+.++.+ |.+++.+.+.. +-.++++++++++++ +
T Consensus 57 ~~~ll~gsGt~amEAav~sl~~pgdkVLv~~nG~FG~R~~~ia~~~-g~~v~~~~~~w--g~~v~p~~v~~~L~~----~ 129 (383)
T COG0075 57 DVVLLSGSGTLAMEAAVASLVEPGDKVLVVVNGKFGERFAEIAERY-GAEVVVLEVEW--GEAVDPEEVEEALDK----D 129 (383)
T ss_pred cEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCChHHHHHHHHHHHh-CCceEEEeCCC--CCCCCHHHHHHHHhc----C
Confidence 456677889999999999999999999998876433 44566666 99999998764 346899999999984 5
Q ss_pred CCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcc
Q 011801 190 INIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKD 269 (477)
Q Consensus 190 ~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~ 269 (477)
+++++|.+++.-.+||...+ +++|.++|++|+.++|+|.+-+ +++.++. ++ .++..+++.+--|.
T Consensus 130 ~~~~~V~~vH~ETSTGvlnp---l~~I~~~~k~~g~l~iVDaVsS---~Gg~~~~-----vd----~wgiDv~itgSQK~ 194 (383)
T COG0075 130 PDIKAVAVVHNETSTGVLNP---LKEIAKAAKEHGALLIVDAVSS---LGGEPLK-----VD----EWGIDVAITGSQKA 194 (383)
T ss_pred CCccEEEEEeccCcccccCc---HHHHHHHHHHcCCEEEEEeccc---CCCcccc-----hh----hcCccEEEecCchh
Confidence 68899999998899999998 8899999999999999999988 6665532 12 34566788888999
Q ss_pred cCCCCceEEEEEeCCHHHHHHHHH---------------h----cccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHH
Q 011801 270 MGLPGFRVGIVYSFNDTVVNCGRK---------------M----SSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLA 330 (477)
Q Consensus 270 ~g~~G~RvG~i~~~~~~i~~~~~~---------------~----~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~ 330 (477)
++.| -.+|++..+++.+...... + ....+.+...-+++...|+.-. ++-++...+|.+
T Consensus 195 l~~P-PGla~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~--~EGle~r~~RH~ 271 (383)
T COG0075 195 LGAP-PGLAFVAVSERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLIL--EEGLEARIARHR 271 (383)
T ss_pred ccCC-CccceeEECHHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHH--HhhHHHHHHHHH
Confidence 9853 2478888876655443321 1 1112233344455555555422 333677888999
Q ss_pred HHHHHHHHHHhhCCCeEecCC---ceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEe-c
Q 011801 331 KRHHNFTKGLEQVGINCLKSN---AGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCF-A 406 (477)
Q Consensus 331 ~r~~~l~~~L~~~gi~~~~~~---~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~-~ 406 (477)
+..+.+.++++++|++.+... ......+.+|...+. + +....+++++|+.+.+|- +......|||+. +
T Consensus 272 ~~~~a~r~~~~alGl~~~~~~~~~s~tvta~~~P~g~~~-----~-~~~~~~~~~~g~~i~gg~--~~l~gkifRIGhMG 343 (383)
T COG0075 272 RLAEALRAGLEALGLELFADPERRSPTVTAIKVPEGVDD-----K-KVRRALLKEYGVEIAGGQ--GPLKGKIFRIGHMG 343 (383)
T ss_pred HHHHHHHHHHHHcCCccccCcccCCCceEEEECCCCCCc-----H-HHHHHHHHhCCEEecccc--cccCccEEEEecCc
Confidence 999999999999999877622 212344556654332 1 233478888899998773 444567899987 5
Q ss_pred cCCHHHHHHHHHHHHHHHhhhh
Q 011801 407 NMDDDTLQVALNRIAAFVQQDK 428 (477)
Q Consensus 407 ~~~~e~l~~~l~~l~~~~~~~~ 428 (477)
+.+.+++..++.+|..++.+..
T Consensus 344 ~~~~~dv~~~l~ale~~L~~~g 365 (383)
T COG0075 344 NVRPEDVLAALAALEAALRELG 365 (383)
T ss_pred cCCHHHHHHHHHHHHHHHHHcC
Confidence 4699999999999999998754
No 253
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.77 E-value=4.2e-16 Score=159.29 Aligned_cols=351 Identities=11% Similarity=0.058 Sum_probs=211.5
Q ss_pred cccccccccccccHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeC
Q 011801 39 GVIQLGLAENQLCFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGG 118 (477)
Q Consensus 39 ~~i~l~~~~n~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~ 118 (477)
..|.|--.||..++...+. +...-. ....+|.. ....|+......++.....+...+.+| .+..+|-.-+
T Consensus 50 ~~l~LiasEN~~s~~v~~a-~~s~l~--nkyaeg~p---g~ryy~g~~~~d~ie~l~~~ra~~lf~----a~~anvqp~S 119 (493)
T PRK13580 50 SSLKLIASENYSSLAVQLA-MGNLLT--DKYAEGTP---GHRFYAGCQNVDTVEWEAAEHAKELFG----AEHAYVQPHS 119 (493)
T ss_pred cCceEecccccCCHHHHHH-hccccc--ccCcCCCC---CccccCCCchHHHHHHHHHHHHHHHhC----CCcccccCCC
Confidence 3477777788776543222 211000 00112211 112344455566777666667766665 3445666666
Q ss_pred ChHHHHHHHHHHhcCC-------------------------------CCeEEEcCCCccchHHH---Hhhh-CCcEEEEE
Q 011801 119 GATGANELIMFCLANP-------------------------------GDAFLVPSPYYAAFDRD---LSWR-TGVQIVPV 163 (477)
Q Consensus 119 G~t~al~~i~~~l~~~-------------------------------Gd~vlv~~P~y~~~~~~---~~~~-~g~~~~~v 163 (477)
| +.|+..++.+|++| ||+|+..++..++.... .... ...+..++
T Consensus 120 g-~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y 198 (493)
T PRK13580 120 G-ADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSY 198 (493)
T ss_pred c-HHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEec
Confidence 6 55888888999876 89999988777554221 0111 02456666
Q ss_pred eccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCc
Q 011801 164 HCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKF 243 (477)
Q Consensus 164 ~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~ 243 (477)
+++. .+..+|.+++++.+++ +++.|+++..+|-. ...+ +++|.++|+++|+++++|++++..++....+
T Consensus 199 ~vd~-~~g~iD~d~l~~~~~~------~~plvii~g~S~~~-~~~d---l~~i~eia~~~gA~L~VD~AH~~Gligg~~~ 267 (493)
T PRK13580 199 GVDP-DTGLLDYDEIAALARE------FKPLILVAGYSAYP-RRVN---FAKLREIADEVGAVLMVDMAHFAGLVAGKVF 267 (493)
T ss_pred ccCc-ccCccCHHHHHHHHhh------cCCEEEEeCccccC-CCcC---HHHHHHHHHHcCCEEEEECchhhceeccccc
Confidence 6664 3457999999999876 56677888877774 4667 8888888999999999999998554542221
Q ss_pred ccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhcccCCCchHHHHHHHHhcCChhhHHHHHH
Q 011801 244 TSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLV 323 (477)
Q Consensus 244 ~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~~~~~vs~~~q~~~~~~L~~~~~~~~~~~ 323 (477)
.. .... ..+..++++|++|++ .|-+.|+|+++++ +.+.+.+..++...++....+++..+.-.+..+...+
T Consensus 268 ~~--~~~~----~~~~D~vtgT~hKaL--~GP~GG~I~~~~~-l~~~L~~a~P~i~gg~l~p~iAA~avAl~e~~~~ef~ 338 (493)
T PRK13580 268 TG--DEDP----VPHADIVTTTTHKTL--RGPRGGLVLAKKE-YADAVDKGCPLVLGGPLPHVMAAKAVALAEARTPEFQ 338 (493)
T ss_pred hh--hcCC----CCCCcEEEeCChhhc--cCCCeEEEEecHH-HHHHHhhCCCcccCCCccHHHHHHHHHHHHHhCccHH
Confidence 10 0000 123457899999988 3444699998654 4444443333321111111211111111111111124
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCeEecC-CceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCC-CCC---C
Q 011801 324 ETSKRLAKRHHNFTKGLEQVGINCLKS-NAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQ-CTE---P 398 (477)
Q Consensus 324 ~~~~~l~~r~~~l~~~L~~~gi~~~~~-~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~-~~~---~ 398 (477)
+.++++.++.+.|.+.|.+.|+++... ..+-.+++++..... ....+...|.+.||.+.+-.... +.+ +
T Consensus 339 ~y~~~l~~Na~~La~~L~~~G~~vv~ggTdshIV~V~lg~~~~------~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~ 412 (493)
T PRK13580 339 KYAQQVVDNARALAEGFLKRGARLVTGGTDNHLVLIDVTSFGL------TGRQAESALLDAGIVTNRNSIPSDPNGAWYT 412 (493)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCccCCCCCCCEEEEEeCCHHH------HHHHHHHHHHHCCeEEccccCCCCCCCCCCC
Confidence 567788899999999999999987531 223577888864211 11245556778899987543222 122 4
Q ss_pred CEEEEEecc-----CCHHHHHHHHHHHHHHHhh
Q 011801 399 GWFRVCFAN-----MDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 399 ~~~Rl~~~~-----~~~e~l~~~l~~l~~~~~~ 426 (477)
..+||+... +++++++++++.|.++++.
T Consensus 413 srLRIg~~A~ttrg~teedi~~iad~l~~~l~~ 445 (493)
T PRK13580 413 SGIRLGTPALTTLGMGSDEMDEVAELIVKVLSN 445 (493)
T ss_pred ceEEeccchhhhcCCCHHHHHHHHHHHHHHHHh
Confidence 579999864 3589999999999999875
No 254
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.76 E-value=1.7e-17 Score=148.35 Aligned_cols=167 Identities=23% Similarity=0.275 Sum_probs=128.7
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchH-HHHhhhCCcEEEEEecc
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFD-RDLSWRTGVQIVPVHCD 166 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~-~~~~~~~g~~~~~v~~~ 166 (477)
+.++++.++++++ .+++++++++|+++|+.+++.++..+|++|+++.|+|+++. ..+... |.++..++.+
T Consensus 2 ~~~~~~~l~~~~~--------~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-g~~~~~v~~~ 72 (170)
T cd01494 2 LEELEEKLARLLQ--------PGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELA-GAKPVPVPVD 72 (170)
T ss_pred HHHHHHHHHHHcC--------CCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHHHhc-CCEEEEeccC
Confidence 3688999999984 34778999999999999999999988999999999999888 666655 9999999887
Q ss_pred CCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccH
Q 011801 167 ISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSV 246 (477)
Q Consensus 167 ~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~ 246 (477)
..+....+.+++++... +.+++++++++|+||+|...+ .++|.++|+++|+++|+|++|..+......
T Consensus 73 ~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~g~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~~~~---- 140 (170)
T cd01494 73 DAGYGGLDVAILEELKA-----KPNVALIVITPNTTSGGVLVP---LKEIRKIAKEYGILLLVDAASAGGASPAPG---- 140 (170)
T ss_pred CCCccchhhhhhhhccc-----cCceEEEEEecCcCCCCeEcC---HHHHHHHHHHcCCEEEEecccccccccccc----
Confidence 54433333334433221 348899999999999999998 477888888999999999999865443221
Q ss_pred HHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEe
Q 011801 247 AEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYS 282 (477)
Q Consensus 247 ~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~ 282 (477)
.... ..+..+++.|++|.+|. .++|++++
T Consensus 141 ~~~~-----~~~~d~~~~s~~K~~~~--~~~G~l~~ 169 (170)
T cd01494 141 VLIP-----EGGADVVTFSLHKNLGG--EGGGVVIV 169 (170)
T ss_pred cccc-----cccCCEEEEEcccccCC--CceEEEEe
Confidence 0111 22456788999999974 78999986
No 255
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.76 E-value=9.5e-16 Score=157.45 Aligned_cols=157 Identities=20% Similarity=0.226 Sum_probs=119.8
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHH----HhhhCCcEEEEE
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRD----LSWRTGVQIVPV 163 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~----~~~~~g~~~~~v 163 (477)
...|++.+|++.+ .+..+++++++.|+..++.+++.+||.|+++...|.+.... +... |++++.+
T Consensus 71 ~~~Le~~lA~l~g----------~~~av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~-Gi~v~~v 139 (436)
T PRK07812 71 QDVVEQRIAALEG----------GVAALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKL-GIEVSFV 139 (436)
T ss_pred HHHHHHHHHHHhC----------CCeEEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcC-eEEEEEE
Confidence 5688888888876 23467777888899999999999999999999888775543 2334 7877777
Q ss_pred eccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCc
Q 011801 164 HCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKF 243 (477)
Q Consensus 164 ~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~ 243 (477)
+ +. .|++++++++++ ++++|++.+|+||+|.+.+ +++|.++|+++|+++|+|++++.... .
T Consensus 140 d-d~-----~d~e~l~~ai~~------~tklV~ie~~sNp~G~v~D---l~~I~~la~~~gi~liVD~t~a~~~~----~ 200 (436)
T PRK07812 140 E-DP-----DDLDAWRAAVRP------NTKAFFAETISNPQIDVLD---IPGVAEVAHEAGVPLIVDNTIATPYL----I 200 (436)
T ss_pred C-CC-----CCHHHHHHhCCC------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc----C
Confidence 4 21 278888887753 7899999999999999999 78888899999999999998863211 1
Q ss_pred ccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeC
Q 011801 244 TSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSF 283 (477)
Q Consensus 244 ~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~ 283 (477)
.++ ..+..+++.|++|.+|-.|--+|+++..
T Consensus 201 ~pl---------~~GaDivv~S~tK~lgg~G~~i~G~vv~ 231 (436)
T PRK07812 201 RPL---------EHGADIVVHSATKYLGGHGTAIAGVIVD 231 (436)
T ss_pred Cch---------hcCCCEEEEecccccCCCCCeEEEEEEc
Confidence 111 1234477899999998777667777663
No 256
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.76 E-value=7.4e-16 Score=158.15 Aligned_cols=354 Identities=14% Similarity=0.072 Sum_probs=201.5
Q ss_pred CCCCCCccccccccc--cccc--cHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCC
Q 011801 32 HPTQNPGGVIQLGLA--ENQL--CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRV 107 (477)
Q Consensus 32 ~~~~~~~~~i~l~~~--~n~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~ 107 (477)
..+.+.+..||+..+ ...+ +.+.+.+.+++.-+ ............+.+..+|+.+.+....+-
T Consensus 29 l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~-------------~~~~~~~~~~~~~~~~~lae~l~~~~~~~~ 95 (412)
T TIGR02407 29 LWDEDGKEYIDFFAGAGALNYGHNNPKLKQALIDYLA-------------DDGIIHSLDMATEAKREFLETFNEIILKPR 95 (412)
T ss_pred EEeCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHh-------------hccceeccccCcHHHHHHHHHHHHhccCcc
Confidence 334455667887543 3334 34666666665311 000000000113445555555543210000
Q ss_pred ccCCCcEEE-eCChHHHHHHHHHHhc--CCCCeEEEcCCCccchHHHHhhhCCc------------EEEEEeccCCCCc-
Q 011801 108 TFDPDRIVM-GGGATGANELIMFCLA--NPGDAFLVPSPYYAAFDRDLSWRTGV------------QIVPVHCDISNNF- 171 (477)
Q Consensus 108 ~~~~~~i~~-t~G~t~al~~i~~~l~--~~Gd~vlv~~P~y~~~~~~~~~~~g~------------~~~~v~~~~~~~f- 171 (477)
.. .+++++ ++++++|++.+++... ....+|+...-+|++....+...+|. .++.+|.......
T Consensus 96 ~~-~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 174 (412)
T TIGR02407 96 GL-DYKVQFPGPTGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGD 174 (412)
T ss_pred CC-CceEEEeCCCchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccc
Confidence 01 135656 5899999999887642 22367888888888875433222121 1222332110000
Q ss_pred ccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCccc-CCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhh
Q 011801 172 KITREALEAAYERAQEASINIKGLIITNPSNPLGT-TLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVI 250 (477)
Q Consensus 172 ~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~-~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~ 250 (477)
.-+++.+++.+++......++.+|++.--.++.|. ..+.+.+++|.++|+++|+++|+||++.++.-.+..+. .. .
T Consensus 175 ~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a-~~-~- 251 (412)
T TIGR02407 175 VDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFS-FE-P- 251 (412)
T ss_pred hhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHH-hc-c-
Confidence 01356677766532111125677766544678898 57888999999999999999999999987533332211 11 0
Q ss_pred hhccCCCCcEEEEecCCcccCCC-CceEEEEEeCCHHHHHHHHH---hcccCCCchHH----HHHHHHhcCChhhHHHHH
Q 011801 251 QEMDCNRDLIHIIYSLSKDMGLP-GFRVGIVYSFNDTVVNCGRK---MSSFGLVSSQT----QYLLASMLSDDEFVDNFL 322 (477)
Q Consensus 251 ~~~~~~~~~viiv~SlSK~~g~~-G~RvG~i~~~~~~i~~~~~~---~~~~~~vs~~~----q~~~~~~L~~~~~~~~~~ 322 (477)
.+..+| +.++||.+| + |+|+|+++++++ + ..... ..+|+ .++++ +.++..++.++++ .+++
T Consensus 252 --~~v~PD----i~~~~K~lg-~~G~pigav~~~~~-~-~~~~~~~~~~T~~-gnpl~~aaa~a~l~~~i~~~~l-~~~~ 320 (412)
T TIGR02407 252 --AGIEPD----IVCLSKSIS-GYGLPLALTLIKPE-L-DVWKPGEHNGTFR-GNNLAFVTATAALEYYWSDDAF-EKAV 320 (412)
T ss_pred --cCCCCC----EEEechhcc-CCccceeEEEEchh-h-hccCCCccCCCCC-ccHHHHHHHHHHHHHHhcccHH-HHHH
Confidence 111344 236899998 7 999999999665 3 22211 12232 34442 2223324556554 4556
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEE
Q 011801 323 VETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFR 402 (477)
Q Consensus 323 ~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~R 402 (477)
++..++++++.+.+.+.+.. +.......|+++|+.++... ...+++..++ +.||.+.+...+ .+.+|
T Consensus 321 ~~~g~~l~~~l~~l~~~~~~--~~~~vrg~Gl~~~l~l~~~~------~~~~~~~~~~-~~Gv~v~~~~~~----~~~lr 387 (412)
T TIGR02407 321 QRKSEIIQERLDRIVAEYPE--LIKQVRGRGLMQGIECGDGD------LAGKIAKAAF-ENGLIIETSGPN----DEVIK 387 (412)
T ss_pred HHHHHHHHHHHHHHHhhCCC--ceEeeecceeEEEEEecChH------HHHHHHHHHH-HCCCEEeccCCC----CCEEE
Confidence 66666666665555544432 22334457899999997521 1124556655 459999875322 35799
Q ss_pred EEeccC-CHHHHHHHHHHHHHHHhh
Q 011801 403 VCFANM-DDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 403 l~~~~~-~~e~l~~~l~~l~~~~~~ 426 (477)
++.+.. +++++++++++|++.+++
T Consensus 388 ~~p~l~~t~~~i~~~~~~l~~~l~~ 412 (412)
T TIGR02407 388 LLPPLTIDEETLQQGLDILEQAVEE 412 (412)
T ss_pred EECCCCCCHHHHHHHHHHHHHHHhC
Confidence 988764 999999999999998853
No 257
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.76 E-value=8.7e-16 Score=157.85 Aligned_cols=156 Identities=19% Similarity=0.233 Sum_probs=124.8
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhh---hCCcEEEEEe
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSW---RTGVQIVPVH 164 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~---~~g~~~~~v~ 164 (477)
..+|++++|++.+ .+..++|+++++|+.+++..+.++||.|+++...|++....+.+ ..|+++..++
T Consensus 66 ~~~le~~lA~l~g----------~~~av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd 135 (433)
T PRK08134 66 VAVLEERVAALEG----------GVGAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVK 135 (433)
T ss_pred HHHHHHHHHHHhC----------CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEEC
Confidence 6889999999986 23468899999999999998899999999999999876554432 1389988887
Q ss_pred ccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcc
Q 011801 165 CDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFT 244 (477)
Q Consensus 165 ~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~ 244 (477)
++ |++++++++++ ++|+|++.+|+||+|.+.+ +++|.++|+++|+++|+|.+++.-.+. .
T Consensus 136 ~~-------d~~~l~~~i~~------~TklV~~e~~~np~g~v~D---i~~I~~la~~~gi~livD~t~a~~~~~----~ 195 (433)
T PRK08134 136 PG-------DIDGWRAAIRP------NTRLLFGETLGNPGLEVLD---IPTVAAIAHEAGVPLLVDSTFTTPYLL----R 195 (433)
T ss_pred CC-------CHHHHHHhcCC------CCeEEEEECCCcccCcccC---HHHHHHHHHHcCCEEEEECCCcccccC----C
Confidence 53 68899988864 8999999999999999999 888899999999999999998632221 1
Q ss_pred cHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEe
Q 011801 245 SVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYS 282 (477)
Q Consensus 245 s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~ 282 (477)
++ ..+..+++.|.+|.+|-+|-.+|.++.
T Consensus 196 pl---------~~GaD~vv~S~tK~l~g~g~~~gG~v~ 224 (433)
T PRK08134 196 PF---------EHGADLVYHSATKFLGGHGTAIGGVLV 224 (433)
T ss_pred ch---------hcCCCEEEeccccccCCCCCceEEEEE
Confidence 11 124458889999999877777777655
No 258
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.76 E-value=3.2e-16 Score=145.36 Aligned_cols=336 Identities=19% Similarity=0.214 Sum_probs=218.2
Q ss_pred cccccccccccccHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeC
Q 011801 39 GVIQLGLAENQLCFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGG 118 (477)
Q Consensus 39 ~~i~l~~~~n~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~ 118 (477)
..+||.++.-..|.+.+.+.+.+... ...-|+...-...|.+.+|+.+++. ..+++++
T Consensus 22 ~~vDLRSDTvT~PTdeMr~am~eA~v-------------gDdVyGeD~tt~rLE~~vA~l~GKE---------AgLFv~S 79 (384)
T KOG1368|consen 22 RSVDLRSDTVTVPTDEMRRAMAEASV-------------GDDVYGEDPTTNRLEQRVAELFGKE---------AGLFVPS 79 (384)
T ss_pred eccccccccccCChHHHHHHHhhccc-------------CcccccCCccHHHHHHHHHHHhCcc---------ceeeecc
Confidence 35888888888888888887766421 2345666666789999999999853 2366666
Q ss_pred ChHHHHHHHHHHhcCCCCeEEEcCCCccchHH--HHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHH--HhCCCeeE
Q 011801 119 GATGANELIMFCLANPGDAFLVPSPYYAAFDR--DLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQ--EASINIKG 194 (477)
Q Consensus 119 G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~--~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~--~~~~~~k~ 194 (477)
|+.+-+-.++.-+-.||..|++.+-++--..+ .+...+|+.+.++.-. ++..+++++++.+++... -+.+.+++
T Consensus 80 GTmgNllaIm~Hc~~rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~~e--~dgtm~ledIe~~ir~~~GD~H~p~T~L 157 (384)
T KOG1368|consen 80 GTMGNLLAIMVHCHQRGSEIIVGDRAHIHRYEQGGISQLAGVHVRTVKNE--NDGTMDLEDIEAAIRVPKGDCHMPPTKL 157 (384)
T ss_pred cccccHHHHHHHhcCCCceEEeccchheeehhccChhhhccceeEeeeeC--CCCeeeHHHHHHhhcCCCCCccCCCceE
Confidence 65554444444455699999999877643222 2333347777777643 455789999999997422 23557899
Q ss_pred EEEeCCCCCcc-cCCCHHHHHHHHHHHHhcCeEEEecccccccccCC--CCcccHHHhhhhccCCCCcEEEEecCCcccC
Q 011801 195 LIITNPSNPLG-TTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSS--PKFTSVAEVIQEMDCNRDLIHIIYSLSKDMG 271 (477)
Q Consensus 195 vii~nP~NPtG-~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~--~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g 271 (477)
|.+.|-+|-+| .++|.|++.++.++|+++|+.+.+|.+.. |+. ....++..+.. ..|.|-+ .|||.+|
T Consensus 158 IclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi---~NAavasgV~vk~i~~----~fDSVsi--CLSKglg 228 (384)
T KOG1368|consen 158 ICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARI---FNAAVASGVPVKKICS----AFDSVSI--CLSKGLG 228 (384)
T ss_pred EEeeccccccCceEeeHHHHHHHHHHHhccCCeeecchhhh---hhHHHHcCCCHHHHHH----hhhhhhh--hhhccCC
Confidence 99999988777 99999999999999999999999999875 543 23366666655 3455544 7899998
Q ss_pred CCCceEEEEEeCCHHHHHHHHHh-cccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCC-CeEec
Q 011801 272 LPGFRVGIVYSFNDTVVNCGRKM-SSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVG-INCLK 349 (477)
Q Consensus 272 ~~G~RvG~i~~~~~~i~~~~~~~-~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~g-i~~~~ 349 (477)
.| +|-|+..+..++..++.+ ...+..-.+.-.++++.|-.- ++.... .+.-.++...+.+.+...+ |++.-
T Consensus 229 AP---VGSViVG~k~FI~kA~~~RKalGGGmRQsGvLaaaaLval---~~~~~~-L~~dHk~A~~lAe~~~~~~~i~v~v 301 (384)
T KOG1368|consen 229 AP---VGSVIVGSKDFIDKARHFRKALGGGMRQSGVLAAAALVAL---DENVPL-LRADHKRAKELAEYINTPEEIRVEV 301 (384)
T ss_pred CC---cccEEEccHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHh---hcchHH-HHHHHHHHHHHHHHhccccceeeec
Confidence 66 787765555555544332 333322222222222222211 111122 2222345566777777664 66654
Q ss_pred C-CceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHH-HHHHhh
Q 011801 350 S-NAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFAN-MDDDTLQVALNRI-AAFVQQ 426 (477)
Q Consensus 350 ~-~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~-~~~e~l~~~l~~l-~~~~~~ 426 (477)
+ -..+++.+.+... .+..+ ++++.+ +++||.+.+|.++. +|+.|.. +++++++.++..+ +.|+..
T Consensus 302 ~a~etNiv~~~l~q~----~~~~~-~l~~~~-~k~gi~lm~~~s~r------~Rivlh~Qvt~~~ve~~~~~~~k~~~~q 369 (384)
T KOG1368|consen 302 PAVETNIVNMVLCQA----RLTAE-ELCKFL-EKNGILLMGGASRR------IRIVLHHQVTDEDVEYVKSVLSKKFLKQ 369 (384)
T ss_pred chhhcceeeeecccc----cCCHH-HHHHHH-HHCCeEEeeccccc------eEEEEEEecCHHHHHHHHHHHHHHHHhh
Confidence 4 3446777666421 11222 466655 57799999887653 8999966 5999999999999 555544
No 259
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.75 E-value=1.7e-15 Score=152.78 Aligned_cols=285 Identities=20% Similarity=0.251 Sum_probs=182.6
Q ss_pred ccCCCC--CcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhh---h
Q 011801 81 IFQDYH--GLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSW---R 155 (477)
Q Consensus 81 ~Y~~~~--G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~---~ 155 (477)
.|..+. -...|.+.+|+..+ .+.++++++++.|+..++.+++++||.|+++...|.+....++. .
T Consensus 48 ~Y~R~gnPt~~~le~~la~Le~----------g~~a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~ 117 (386)
T PF01053_consen 48 IYSRYGNPTVRALEQRLAALEG----------GEDALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPR 117 (386)
T ss_dssp SBTTTC-HHHHHHHHHHHHHHT-----------SEEEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHH
T ss_pred ceeccccccHHHHHHHHHHhhc----------ccceeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcc
Confidence 455432 23567777777654 46799999999999999999999999999999999887655442 1
Q ss_pred CCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcC-eEEEeccccc
Q 011801 156 TGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKN-IHLVCDEIYA 234 (477)
Q Consensus 156 ~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~-~~lI~De~y~ 234 (477)
.|+++..++. -|++++++++++ ++++|++..|+||+..+.+ +++|+++|+++| +++|+|..++
T Consensus 118 ~gv~v~~~d~-------~d~~~l~~~l~~------~t~~v~~EspsNP~l~v~D---l~~i~~~a~~~g~~~~vVDnT~a 181 (386)
T PF01053_consen 118 FGVEVTFVDP-------TDLEALEAALRP------NTKLVFLESPSNPTLEVPD---LEAIAKLAKEHGDILVVVDNTFA 181 (386)
T ss_dssp TTSEEEEEST-------TSHHHHHHHHCT------TEEEEEEESSBTTTTB------HHHHHHHHHHTTT-EEEEECTTT
T ss_pred cCcEEEEeCc-------hhHHHHHhhccc------cceEEEEEcCCCccccccc---HHHHHHHHHHhCCceEEeecccc
Confidence 3899887764 268999998875 8999999999999999888 899999999998 9999999997
Q ss_pred ccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccC-CCCceEEEEEeCC-HHHHHHHHHh-cccC-CCchHHHHHHHH
Q 011801 235 ATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMG-LPGFRVGIVYSFN-DTVVNCGRKM-SSFG-LVSSQTQYLLAS 310 (477)
Q Consensus 235 ~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g-~~G~RvG~i~~~~-~~i~~~~~~~-~~~~-~vs~~~q~~~~~ 310 (477)
..++-. + + ..+..+++.|++|.++ ....=.|.+++++ +.+...++.. ..++ .+++...+.+..
T Consensus 182 tp~~~~----p---L------~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~G~~~~p~da~ll~r 248 (386)
T PF01053_consen 182 TPYNQN----P---L------ELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRLLGATLSPFDAWLLLR 248 (386)
T ss_dssp HTTTC-----G---G------GGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHHHT-B--HHHHHHHHH
T ss_pred ceeeec----c---C------cCCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhhhcCccchHHHHHHHhc
Confidence 431211 1 1 1244588999999985 2334478888766 4555444332 2333 356666666666
Q ss_pred hcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCC-Ce-Ee-c----------------CCceEEEEeeccchhhccCchH
Q 011801 311 MLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVG-IN-CL-K----------------SNAGLFFWMDLRHLLKEKTLEG 371 (477)
Q Consensus 311 ~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~g-i~-~~-~----------------~~~g~~~~~~l~~~~~~~~~~~ 371 (477)
-|..- .-+.++..++...+.+.|+++. +. +. + ..+| .+.+++....
T Consensus 249 gl~Tl-------~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~gg-l~sf~l~~~~------- 313 (386)
T PF01053_consen 249 GLRTL-------PLRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGG-LLSFELKGGE------- 313 (386)
T ss_dssp HHTTH-------HHHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTS-EEEEEESSHH-------
T ss_pred CCCcH-------HHHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCc-eeEEEeccch-------
Confidence 66663 3334555667777888888872 32 22 1 1234 6677777542
Q ss_pred HHHHHHHHHHhcCeEEeCCCCCCC-------------------------CCCCEEEEEeccCCHHHHHHHHHHHHHHHh
Q 011801 372 EIALWRTIVNDVKLNVSPGSSFQC-------------------------TEPGWFRVCFANMDDDTLQVALNRIAAFVQ 425 (477)
Q Consensus 372 e~~l~~~ll~~~gI~v~pg~~f~~-------------------------~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~ 425 (477)
+....+++.-++. ..|.+++. ..++.+|||++. |+.+.+++.|+++++
T Consensus 314 --~~~~~f~~~l~l~-~~~~SlGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvGl---Ed~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 314 --EAARRFLDALKLF-SIAPSLGGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVGL---EDPDDLIADLEQALE 386 (386)
T ss_dssp --HHHHHHHHH-SSS-EESSS-SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE--S---S-HHHHHHHHHHHHH
T ss_pred --hhhHhHHhhhhhH-hhhhhcCCcccccccccchhhccCChhhhhccCCCCCeeEEEecc---CCHHHHHHHHHHhcC
Confidence 1234444444442 12223321 124689999995 667778888887764
No 260
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.74 E-value=1.6e-15 Score=157.04 Aligned_cols=294 Identities=11% Similarity=0.034 Sum_probs=169.8
Q ss_pred CCcEEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCccchHHHHhhhCCc-------------EEEEEeccCCC--Ccc-
Q 011801 111 PDRIVMGGGATGANELIMFCLA--NPGDAFLVPSPYYAAFDRDLSWRTGV-------------QIVPVHCDISN--NFK- 172 (477)
Q Consensus 111 ~~~i~~t~G~t~al~~i~~~l~--~~Gd~vlv~~P~y~~~~~~~~~~~g~-------------~~~~v~~~~~~--~f~- 172 (477)
.+.+++++++++|++.+++... .....|+...-+|++.........+. .+..+|..... .+.
T Consensus 103 ~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (433)
T PRK08117 103 LDCFFFSNSGAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGE 182 (433)
T ss_pred CCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccC
Confidence 3689999999999999987621 12356888888887754322101010 11222221100 000
Q ss_pred -------cCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccC-CCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcc
Q 011801 173 -------ITREALEAAYERAQEASINIKGLIITNPSNPLGTT-LDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFT 244 (477)
Q Consensus 173 -------i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~-~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~ 244 (477)
-+++++++.+++.. ...++.+|++.--..-.|.+ .+.+.+++|.++|++||+++|+||+|.++...+..+.
T Consensus 183 ~~~~~~~~~~~~l~~~~~~~~-~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~ 261 (433)
T PRK08117 183 DPEVCFLECLRDLESLFKHQV-TPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFA 261 (433)
T ss_pred chhHHHHHHHHHHHHHHHhcc-CCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchh
Confidence 13455555554311 12356665555334556765 5788899999999999999999999998645443322
Q ss_pred cHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHh--cccCCCchHHHHHHHHhcCChhhHHHHH
Q 011801 245 SVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKM--SSFGLVSSQTQYLLASMLSDDEFVDNFL 322 (477)
Q Consensus 245 s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~--~~~~~vs~~~q~~~~~~L~~~~~~~~~~ 322 (477)
. +.. +..++ +.||||.+| +|+++|++++.++ +.+..... ......+++++.++.+.|+.-+ +.
T Consensus 262 ~--~~~---gv~pD----i~t~sK~lg-~G~pigav~~~~~-i~~~~~~~~~~~T~~~np~~~aaa~a~L~~l~--~~-- 326 (433)
T PRK08117 262 A--QTF---GVVPD----IMTIAKGIA-SGLPLSAVVASKE-LMEQWPLGSHGTTFGGNPVACAAALATLEVIK--EE-- 326 (433)
T ss_pred H--hhc---CCCCC----Eeehhhhcc-CCCcceeEEEcHH-HHhhccCCCCCCCCCcCHHHHHHHHHHHHHHH--hc--
Confidence 1 111 11222 469999999 9999999999654 43333221 1112357778887777775321 11
Q ss_pred HHHHHHHHHHHHHHHHHHhh----CCCeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCC
Q 011801 323 VETSKRLAKRHHNFTKGLEQ----VGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEP 398 (477)
Q Consensus 323 ~~~~~~l~~r~~~l~~~L~~----~gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~ 398 (477)
...+++++..+++.+.|++ +++.......|+++++.+..............+++.++ +.||.+.+... ..
T Consensus 327 -~l~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~g~----~~ 400 (433)
T PRK08117 327 -KLLDNANEMGAYALERLEVLKEKHPVIGDVRGIGLMIGIEIVDPDGEPDGDAVEKILDKCL-EKGLLFYLCGN----AG 400 (433)
T ss_pred -cHHHHHHHHHHHHHHHHHHHHhcCCceeeeecCCcEEEEEEecCCCCcchHHHHHHHHHHH-HCCCEEeecCC----CC
Confidence 1222333333444444443 23322234556788888853211111111223455554 56999876321 24
Q ss_pred CEEEEEecc-CCHHHHHHHHHHHHHHHhh
Q 011801 399 GWFRVCFAN-MDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 399 ~~~Rl~~~~-~~~e~l~~~l~~l~~~~~~ 426 (477)
+++|+++.. ++++++++++++|.+++++
T Consensus 401 ~~lRl~p~~~~t~~~i~~~~~~l~~~l~~ 429 (433)
T PRK08117 401 NVLRMIPPLTVTKEEIDEGLDILDEALTE 429 (433)
T ss_pred CEEEEeCCccCCHHHHHHHHHHHHHHHHH
Confidence 689999743 5999999999999999865
No 261
>PLN02880 tyrosine decarboxylase
Probab=99.74 E-value=2.8e-15 Score=156.40 Aligned_cols=327 Identities=12% Similarity=0.095 Sum_probs=209.1
Q ss_pred cCCCCCcHHHHHHHHHHHhcccCCCCccC---CCcEEEeCChHHHHHHHHHHhcC-----------CCCeEEEcCCCccc
Q 011801 82 FQDYHGLPEFRQAVAKFMGKGRGGRVTFD---PDRIVMGGGATGANELIMFCLAN-----------PGDAFLVPSPYYAA 147 (477)
Q Consensus 82 Y~~~~G~~~lr~aia~~~~~~~g~~~~~~---~~~i~~t~G~t~al~~i~~~l~~-----------~Gd~vlv~~P~y~~ 147 (477)
|...++..++.+.+.+|+.+..|.+-.+. ...-++|+|+|+++..++.+-.+ +.-.|++.+-++..
T Consensus 114 ~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~S 193 (490)
T PLN02880 114 WITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSA 193 (490)
T ss_pred cccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHH
Confidence 33345678999999999999877321110 02478899999998877655321 11245567777888
Q ss_pred hHHHHhhhCCcE---EEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcC
Q 011801 148 FDRDLSWRTGVQ---IVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKN 224 (477)
Q Consensus 148 ~~~~~~~~~g~~---~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~ 224 (477)
..+++... |+. ++.||++..+++++|+++|++++++..+++..+-+|+.+-.+.+||.+-+ +++|.++|+++|
T Consensus 194 v~Kaa~~l-Glg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDp---l~eI~~i~~~~~ 269 (490)
T PLN02880 194 LQKACQIA-GIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDP---LLELGKIAKSNG 269 (490)
T ss_pred HHHHHHHc-CCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCc---HHHHHHHHHHcC
Confidence 88888887 884 78889886668899999999999987777766777777778899999999 888999999999
Q ss_pred eEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHH-HHHHHHhcccC-----
Q 011801 225 IHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTV-VNCGRKMSSFG----- 298 (477)
Q Consensus 225 ~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i-~~~~~~~~~~~----- 298 (477)
+|+++|.+|++.....+.+.. .+.. .....-+..+++|.++ ....+|+++..+... ...+.....|.
T Consensus 270 iwlHVDaA~gg~~~~~~~~~~---~l~g---ie~aDSit~d~HKwl~-~P~~~g~llvr~~~~l~~~~~~~~~Yl~~~~~ 342 (490)
T PLN02880 270 MWFHVDAAYAGSACICPEYRH---YIDG---VEEADSFNMNAHKWFL-TNFDCSLLWVKDRNALIQSLSTNPEFLKNKAS 342 (490)
T ss_pred CEEEEehhhHHHHHhCHHHHH---HhcC---chhcCEEEECchhhcC-CCccEEEEEEeCHHHHHHHHccCHHHhcCccc
Confidence 999999999986443332211 1110 1123356779999985 888999999875432 22221111110
Q ss_pred -----------CC-c-----hHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEecCCceEEEEeec
Q 011801 299 -----------LV-S-----SQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLKSNAGLFFWMDL 360 (477)
Q Consensus 299 -----------~v-s-----~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~~~~g~~~~~~l 360 (477)
++ . .+.-++....+... -+++..++.-+..+++.+.+++. ++++..+.....+.+++
T Consensus 343 ~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~-----g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~~~iv~Fr~ 417 (490)
T PLN02880 343 QANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVE-----NLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRIFSLVCFRL 417 (490)
T ss_pred cccCCCChhccCcCCCCcccHHHHHHHHHHhCHH-----HHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEE
Confidence 00 0 11111112222222 23444444446667788888765 78776654333445566
Q ss_pred cch-hhccCchH-HHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccC--CHHHHHHHHHHHHHHHhhh
Q 011801 361 RHL-LKEKTLEG-EIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANM--DDDTLQVALNRIAAFVQQD 427 (477)
Q Consensus 361 ~~~-~~~~~~~~-e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~--~~e~l~~~l~~l~~~~~~~ 427 (477)
++. ......+. ..++.+++.++..+.+.+.. + .+..++|+|+.+. ++++++.+++.|.++.++.
T Consensus 418 ~~~~~~~~~~~~~n~~l~~~l~~~g~~~v~~t~-~--~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~~ 485 (490)
T PLN02880 418 VPPKNNEDNGNKLNHDLLDAVNSSGKIFISHTV-L--SGKYVLRFAVGAPLTEERHVTAAWKVLQDEASKL 485 (490)
T ss_pred eCCCCChhhHHHHHHHHHHHHHhCCCEEEEEEE-E--CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Confidence 531 11100010 12455666666667665432 2 3456999999875 5799999999999887654
No 262
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.74 E-value=3.3e-16 Score=144.95 Aligned_cols=304 Identities=14% Similarity=0.128 Sum_probs=202.4
Q ss_pred ccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHH
Q 011801 71 EGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDR 150 (477)
Q Consensus 71 ~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~ 150 (477)
.|+...+-+..|+++| ..|...||+|.+ .++.++-+.+-.|+..++-++..|.|+|+-..-.+.....
T Consensus 99 aGlssvrfIcGtq~iH--k~LE~kiAqfh~----------rED~ilypscfdANag~feail~pedAvfSDeLNhASIId 166 (417)
T KOG1359|consen 99 AGLSSVRFICGTQDIH--KLLESKIAQFHG----------REDTILYPSCFDANAGAFEAILTPEDAVFSDELNHASIID 166 (417)
T ss_pred CCccceeEEecchHHH--HHHHHHHHHHhC----------CCceEEeccccccchHHHHHhcChhhhhhccccccchhhh
Confidence 4455556678899987 899999999997 3566667777889999999999999999988888877665
Q ss_pred HHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEec
Q 011801 151 DLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCD 230 (477)
Q Consensus 151 ~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~D 230 (477)
.++.. . .--.+|+..++..+..+.+. +.|+|+...--.-.|.+.| +++|.+++++||.++++|
T Consensus 167 GirLc-k-----------ry~h~dv~~l~~~l~~a~k~--r~klv~TDg~FSMDGdiaP---l~ei~~La~kYgaLlfiD 229 (417)
T KOG1359|consen 167 GIRLC-K-----------RYRHVDVFDLEHCLISACKM--RLKLVVTDGVFSMDGDIAP---LEEISQLAKKYGALLFID 229 (417)
T ss_pred hhHHH-h-----------hhccchhHHHHHHHHHhhhh--eEEEEEecceeccCCCccc---HHHHHHHHHhcCcEEEEe
Confidence 55543 1 01135677777766654433 6676555445678899999 778888888999999999
Q ss_pred ccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccC-CCCceEEEEEeCCHHHHHHHHH-hcccCCCchHH----
Q 011801 231 EIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMG-LPGFRVGIVYSFNDTVVNCGRK-MSSFGLVSSQT---- 304 (477)
Q Consensus 231 e~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g-~~G~RvG~i~~~~~~i~~~~~~-~~~~~~vs~~~---- 304 (477)
|+++..+|+... ....+.+ ++..+..++.++++|++| +.| ||..++.+ +++.++. .++|...+++.
T Consensus 230 ecHaTgf~G~tG-rGt~E~~---~vm~~vdiinsTLgKAlGga~G---Gyttgp~~-li~llrqr~RpylFSnslppavV 301 (417)
T KOG1359|consen 230 ECHATGFFGETG-RGTAEEF---GVMGDVDIINSTLGKALGGASG---GYTTGPKP-LISLLRQRSRPYLFSNSLPPAVV 301 (417)
T ss_pred ecccceeecCCC-CChHHHh---CCCCcceehhhhhhhhhcCCCC---CCccCChh-HHHHHHhcCCceeecCCCChhhh
Confidence 999876665443 4444443 234567788899999997 555 99999665 4555544 34543222211
Q ss_pred ---HHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchhhccCchHHHHHHHHHHH
Q 011801 305 ---QYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVN 381 (477)
Q Consensus 305 ---q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~ 381 (477)
..+...++.+. +...+.+.+.+++.+.++..|+++...+. ..+-+-+.+.-. .....+.+|+
T Consensus 302 ~~a~ka~dllm~s~--------~~i~~~~a~~qrfr~~me~aGftIsg~~h-PI~pv~lGda~l------A~~~ad~lLk 366 (417)
T KOG1359|consen 302 GMAAKAYDLLMVSS--------KEIQSRQANTQRFREFMEAAGFTISGASH-PICPVMLGDARL------ASKMADELLK 366 (417)
T ss_pred hhhHHHHHHHHhhH--------HHHHHHHHHHHHHHHHHHhcCceecCCCC-CccceecccHHH------HHHHHHHHHh
Confidence 11122222221 22334556677788888888988776443 444444443211 1234566775
Q ss_pred hcCeEEeCCCCCCC--CCCCEEEEEeccC-CHHHHHHHHHHHHHHHhhhh
Q 011801 382 DVKLNVSPGSSFQC--TEPGWFRVCFANM-DDDTLQVALNRIAAFVQQDK 428 (477)
Q Consensus 382 ~~gI~v~pg~~f~~--~~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~~~~ 428 (477)
. ||.|..- +|.- .+...+|+.++.. ++|+++++++++.++.+.++
T Consensus 367 ~-Gi~Vigf-s~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr~~~ 414 (417)
T KOG1359|consen 367 R-GIYVIGF-SYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGRFLN 414 (417)
T ss_pred c-CceEEee-cCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHHHHhhc
Confidence 5 9998643 3332 2334789888664 99999999999999887643
No 263
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.74 E-value=1.2e-15 Score=139.74 Aligned_cols=304 Identities=16% Similarity=0.217 Sum_probs=205.9
Q ss_pred CcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEecc
Q 011801 87 GLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCD 166 (477)
Q Consensus 87 G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~ 166 (477)
...+|.+.+|+|++ -|.+-+|+|+.++-+.++.+|+++||.|++..-++....-+++.. |+++..||-.
T Consensus 62 pI~~F~~dlaeFlg----------~D~~R~t~GARe~KfavMhal~~~gd~vV~D~~aHYttyvAAEra-gl~v~eVp~t 130 (382)
T COG1103 62 PIKDFLEDLAEFLG----------MDEVRVTAGAREAKFAVMHALCKEGDWVVVDSLAHYTTYVAAERA-GLNVAEVPNT 130 (382)
T ss_pred cHHHHHHHHHHHhC----------CceeeecccchhhHHHHHHHhccCCCEEEEcCcchHHHHHHHHhc-CCeEEecCCC
Confidence 46789999999997 578999999999999999999999999999988754444456655 9999999976
Q ss_pred CCCCcccCHHHHHHHHHHHHHhC-CCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCccc
Q 011801 167 ISNNFKITREALEAAYERAQEAS-INIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTS 245 (477)
Q Consensus 167 ~~~~f~i~~~~l~~~~~~~~~~~-~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s 245 (477)
....|.++++...+.+++..+++ ..+.+.+++.|....|.+.+ -++++++|+++++.++...+|.- +.-..|
T Consensus 131 g~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~D---akkva~ic~e~gvPlllN~AYt~----Grmpvs 203 (382)
T COG1103 131 GYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLAD---AKKVAKICREYGVPLLLNCAYTV----GRMPVS 203 (382)
T ss_pred CCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchh---hHHHHHHHHHcCCceEeecceee----cccccc
Confidence 66789999999999999888775 45777899988777777766 89999999999999999999972 222244
Q ss_pred HHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhcc---------cCCCchHHHHHHHHhcCChh
Q 011801 246 VAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSS---------FGLVSSQTQYLLASMLSDDE 316 (477)
Q Consensus 246 ~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~~---------~~~vs~~~q~~~~~~L~~~~ 316 (477)
..++ +..++++|-+|+|+ +.-.+|.+....+.-...+++..- ++ ++.-..-++.-|-+-+.
T Consensus 204 ~ke~--------g~DFiVgSGHKsmA-As~PiGvl~~~eE~ae~V~r~Sg~~~~~KEvellG-CT~rGapivTlmASfP~ 273 (382)
T COG1103 204 GKEI--------GADFIVGSGHKSMA-ASAPIGVLAMSEEWAEIVLRRSGRAFPKKEVELLG-CTVRGAPIVTLMASFPH 273 (382)
T ss_pred cccc--------CCCEEEecCccchh-ccCCeeEEeehhHHHHHHHhhcccccccceeeeec-ccccCchHHHHHhcCHH
Confidence 3333 45689999999997 666899998865443333333211 12 22222222222223332
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhCC-CeEec--CCceEEEEeeccchhh--ccCchHHHHHHHHHHHhcCeE-EeCC
Q 011801 317 FVDNFLVETSKRLAKRHHNFTKGLEQVG-INCLK--SNAGLFFWMDLRHLLK--EKTLEGEIALWRTIVNDVKLN-VSPG 390 (477)
Q Consensus 317 ~~~~~~~~~~~~l~~r~~~l~~~L~~~g-i~~~~--~~~g~~~~~~l~~~~~--~~~~~~e~~l~~~ll~~~gI~-v~pg 390 (477)
+.+.+.+-.+.+ +..+++.+.|+++| +.-+. |...-.+.+..|.+.. .+....---|.+. |+++||. |.||
T Consensus 274 -V~eRVkrWdeEv-~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp~f~eIakk~~r~gyFlY~E-LK~RgI~GI~~G 350 (382)
T COG1103 274 -VVERVKRWDEEV-EKARWFVAELEKIGGVKQLGERPKNHDLMKFETPVFHEIAKKHKRKGYFLYEE-LKKRGIHGIQPG 350 (382)
T ss_pred -HHHHHHHHHHHH-HHHHHHHHHHHHhhhHHHhCCCCcccceeeecCchHHHHHHhCcCCceeeHHH-HHhcCccccccC
Confidence 233333333333 34578888888874 54332 3333344445453211 0000000012222 4455764 4554
Q ss_pred CCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhhh
Q 011801 391 SSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQQD 427 (477)
Q Consensus 391 ~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~~ 427 (477)
. ..||.+++-.++.|+++..+++++++++++
T Consensus 351 ~------Tk~~K~svyGl~~Eqve~V~~afkeI~eky 381 (382)
T COG1103 351 Q------TKYFKLSVYGLSWEQVEYVVDAFKEIAEKY 381 (382)
T ss_pred c------eeEEEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence 2 458999997789999999999999999874
No 264
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.74 E-value=7.1e-16 Score=152.05 Aligned_cols=166 Identities=22% Similarity=0.292 Sum_probs=135.8
Q ss_pred CCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhc-CCCC----eEEEcCCCccchHHH---HhhhC
Q 011801 85 YHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLA-NPGD----AFLVPSPYYAAFDRD---LSWRT 156 (477)
Q Consensus 85 ~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~-~~Gd----~vlv~~P~y~~~~~~---~~~~~ 156 (477)
..+..+-|+.||++++ .++.+|++|+|+|++++++++... .++| .|++..-.|+..... ++..
T Consensus 84 ~~~~E~aR~~VAklIn--------Ad~~dIiFts~ATEs~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~- 154 (428)
T KOG1549|consen 84 EDAVEAAREQVAKLIN--------ADPSDIVFTSGATESNNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEE- 154 (428)
T ss_pred hHHHHHHHHHHHHHhC--------CCCCcEEEeCCchHHHHHHHHHhhccccccccceEEEecccCcchhHHHHHHHhc-
Confidence 3457889999999987 688889999999999999998874 3456 888888778765533 4444
Q ss_pred CcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEeccccccc
Q 011801 157 GVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAAT 236 (477)
Q Consensus 157 g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~ 236 (477)
|.++..+|++ ++..+|.+.++++++. ++++|.|..-+|-+|.++| +++|+++|+++|+++++|.+++
T Consensus 155 g~~Vt~lpv~--~~~~~d~~~~~~~i~~------~T~lv~I~~Vnn~~gv~~P---v~EI~~icr~~~v~v~~DaAQa-- 221 (428)
T KOG1549|consen 155 GLEVTYLPVE--DSGLVDISKLREAIRS------KTRLVSIMHVNNEIGVLQP---VKEIVKICREEGVQVHVDAAQA-- 221 (428)
T ss_pred CeEEEEeccC--ccccccHHHHHHhcCC------CceEEEEEecccCcccccc---HHHHHHHhCcCCcEEEeehhhh--
Confidence 8999999987 3456799999999986 9999999999999999999 8999999999999999999997
Q ss_pred ccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCC
Q 011801 237 VFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFN 284 (477)
Q Consensus 237 ~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~ 284 (477)
.+ .-.+.+.++ +..+...|.+|.+|.|| +|++|+..
T Consensus 222 -vG-~i~vDV~el--------n~D~~s~s~HK~ygp~~--iGaLYvr~ 257 (428)
T KOG1549|consen 222 -VG-KIPVDVQEL--------NADFLSISAHKIYGPPG--IGALYVRR 257 (428)
T ss_pred -cC-CccccHHHc--------CchheeeecccccCCCc--ceEEEEcc
Confidence 33 223555544 33456679999999999 99999964
No 265
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.73 E-value=6.8e-15 Score=152.45 Aligned_cols=353 Identities=14% Similarity=0.091 Sum_probs=197.0
Q ss_pred CCCCccccccccc--cccc--cHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCcc
Q 011801 34 TQNPGGVIQLGLA--ENQL--CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTF 109 (477)
Q Consensus 34 ~~~~~~~i~l~~~--~n~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~ 109 (477)
+.+.+..||+..+ .+.+ +.+.+.+.+.+.- +.+..+.......+.+..+|+.+.+..+. .
T Consensus 52 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~-------------~~~~~~~~~~~~~~~~~~la~~l~~~~p~---~ 115 (443)
T PRK06058 52 DVDGNRLIDLGSGIAVTSVGNSAPRVVEAVREQV-------------ARFTHTCFMVTPYEGYVAVAEQLNRLTPG---D 115 (443)
T ss_pred eCCCCEEEEcCcchhhhccCCCCHHHHHHHHHHH-------------HhccCccccccCCHHHHHHHHHHHHhCCC---C
Confidence 3445667887544 3334 3466666666531 11111211112345666667766543220 0
Q ss_pred CCCcEEEeCChHHHHHHHHHH---hcCCCCeEEEcCCCccchHHHHhhhCCc-------------EEEEEeccCC--C--
Q 011801 110 DPDRIVMGGGATGANELIMFC---LANPGDAFLVPSPYYAAFDRDLSWRTGV-------------QIVPVHCDIS--N-- 169 (477)
Q Consensus 110 ~~~~i~~t~G~t~al~~i~~~---l~~~Gd~vlv~~P~y~~~~~~~~~~~g~-------------~~~~v~~~~~--~-- 169 (477)
..+.+++++++++|++.+++. ..+ .++|+...++|++....+...++. .+..++.... .
T Consensus 116 ~~~~v~f~~sGseA~e~AlklAr~~tg-r~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (443)
T PRK06058 116 HEKRSALFNSGAEAVENAVKIARSYTG-RQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPK 194 (443)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHhhC-CCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCccccccc
Confidence 125789999999999999874 333 378999999999876443221111 1122221100 0
Q ss_pred CcccC-HHHHHHHHHHHHH--hCCCeeEEEEeCCCCCcc-cC-CCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcc
Q 011801 170 NFKIT-REALEAAYERAQE--ASINIKGLIITNPSNPLG-TT-LDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFT 244 (477)
Q Consensus 170 ~f~i~-~~~l~~~~~~~~~--~~~~~k~vii~nP~NPtG-~~-~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~ 244 (477)
++..+ .+.+++.++...+ ...++.+|+ ..|-+..| .+ .+.+.+++|.++|++||+++|.||++.++...+..+.
T Consensus 195 ~~~~~~~~~~~~~~~~l~~~~~~~~iAavi-~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa 273 (443)
T PRK06058 195 GLATDGEEAAARAITVIEKQVGADNLAAVI-IEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFA 273 (443)
T ss_pred ccccchHHHHHHHHHHHHHhhCCCceEEEE-ECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhH
Confidence 00111 1222222221111 123676655 56766654 43 4577899999999999999999999998654444321
Q ss_pred cHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHh---cccCCCchHHHHHHHHhcCChhhHHHH
Q 011801 245 SVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKM---SSFGLVSSQTQYLLASMLSDDEFVDNF 321 (477)
Q Consensus 245 s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~---~~~~~vs~~~q~~~~~~L~~~~~~~~~ 321 (477)
. +. .+..+| ++ +++|.+| .|+++|+++++++ +.+.+... ..| ..+++++.++.+.|+.-+ +.
T Consensus 274 ~--~~---~gv~PD--iv--~~gK~l~-~G~Pi~av~~~~~-i~~~~~~~~~~~T~-~gnpl~~aaa~a~L~~~~--~~- 338 (443)
T PRK06058 274 C--EH---EGIVPD--LI--TTAKGIA-GGLPLSAVTGRAE-IMDAPHPGGLGGTY-GGNPVACAAALAAIETIE--ED- 338 (443)
T ss_pred H--Hh---cCCCCC--EE--EEccccc-CCCccEEEEEcHH-HHhhccCCCCCCCC-CCCHHHHHHHHHHHHHHH--Hc-
Confidence 1 11 122334 22 5589999 9999999999554 44443322 222 367788888777775311 11
Q ss_pred HHHHHHHHHHHHHHHHHHHhhC----CCeEecCCceEEEEeeccchh-hccCchHHHHHHHHHHHhcCeEEeCCCCCCCC
Q 011801 322 LVETSKRLAKRHHNFTKGLEQV----GINCLKSNAGLFFWMDLRHLL-KEKTLEGEIALWRTIVNDVKLNVSPGSSFQCT 396 (477)
Q Consensus 322 ~~~~~~~l~~r~~~l~~~L~~~----gi~~~~~~~g~~~~~~l~~~~-~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~ 396 (477)
...++++++.+++.++|+++ ++...-...|.++.+.+.... .....+....++..++ +.||.+.|+..|+
T Consensus 339 --~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~-~~Gv~~~~~~~~~-- 413 (443)
T PRK06058 339 --DLVARARQIEALMTDRLRALAAEDDRIGDVRGRGAMIAIELVKPGTTEPDAELTKALAAAAH-AAGVIVLTCGTYG-- 413 (443)
T ss_pred --CHHHHHHHHHHHHHHHHHHHHhhCCcEEeeeccceEEEEEEecCCCCCCcHHHHHHHHHHHH-HCCeEEeccCCCC--
Confidence 22333444445555555542 321112234566666664211 0001111123445554 5699999875553
Q ss_pred CCCEEEEEecc-CCHHHHHHHHHHHHHHHhh
Q 011801 397 EPGWFRVCFAN-MDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 397 ~~~~~Rl~~~~-~~~e~l~~~l~~l~~~~~~ 426 (477)
+++|+..+. ++++++++++++|.+++++
T Consensus 414 --~~lr~~Ppl~~t~~~i~~~~~~l~~~l~~ 442 (443)
T PRK06058 414 --NVIRLLPPLVIGDELLREGLDVLEAALAD 442 (443)
T ss_pred --CEEEEECCCccCHHHHHHHHHHHHHHHHh
Confidence 589997655 4999999999999999864
No 266
>PLN02590 probable tyrosine decarboxylase
Probab=99.73 E-value=9.7e-15 Score=152.56 Aligned_cols=326 Identities=14% Similarity=0.122 Sum_probs=209.0
Q ss_pred cCCCCCcHHHHHHHHHHHhcccCCCCccC---CCcEEEeCChHHHHHHHHHHhcC-----------CCCeEEEcCCCccc
Q 011801 82 FQDYHGLPEFRQAVAKFMGKGRGGRVTFD---PDRIVMGGGATGANELIMFCLAN-----------PGDAFLVPSPYYAA 147 (477)
Q Consensus 82 Y~~~~G~~~lr~aia~~~~~~~g~~~~~~---~~~i~~t~G~t~al~~i~~~l~~-----------~Gd~vlv~~P~y~~ 147 (477)
|...++..++.+.+.+|+.+..|.+-.+- ...-++++|+|+|+..++.+-.+ |.-.|++.+-++..
T Consensus 162 ~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~S 241 (539)
T PLN02590 162 WLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSS 241 (539)
T ss_pred cccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHH
Confidence 44456778999999999999887321100 13467899999999877655321 11245566777888
Q ss_pred hHHHHhhhCCc---EEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcC
Q 011801 148 FDRDLSWRTGV---QIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKN 224 (477)
Q Consensus 148 ~~~~~~~~~g~---~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~ 224 (477)
+.+++... |+ +++.||++..+++++|+++|++++++..+.+..+-+|+.+-.+..||.+=+ +++|.++|+++|
T Consensus 242 v~KAa~il-Glg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDp---l~~Ia~i~~~~g 317 (539)
T PLN02590 242 FRKACLIG-GIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDP---LVPLGNIAKKYG 317 (539)
T ss_pred HHHHHHHc-CCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCC---HHHHHHHHHHhC
Confidence 88888876 87 588899886668999999999999987777767777777878889999977 889999999999
Q ss_pred eEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHH-HHHHHHH----hcc---
Q 011801 225 IHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDT-VVNCGRK----MSS--- 296 (477)
Q Consensus 225 ~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~-i~~~~~~----~~~--- 296 (477)
+|+.+|.+|++...-.+.+......++ ..+ -+...++|.+. ..+-+|.++..+.. +...+.. +..
T Consensus 318 ~WlHVDaA~GG~al~~~~~r~~~~Gie----~AD--Sit~D~HK~l~-~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~~ 390 (539)
T PLN02590 318 IWLHVDAAYAGNACICPEYRKFIDGIE----NAD--SFNMNAHKWLF-ANQTCSPLWVKDRYSLIDALKTNPEYLEFKVS 390 (539)
T ss_pred CeEEEecchhhhhhcChhhHHHhcCCc----cCC--EEEECchhhcC-cCcCEEEEEecCHHHHHHHhhcCHHHhCCccc
Confidence 999999999986543333222111111 123 34569999986 77899999887653 2222211 100
Q ss_pred -------cC--C--Cc----hHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEecC-CceEEEEee
Q 011801 297 -------FG--L--VS----SQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLKS-NAGLFFWMD 359 (477)
Q Consensus 297 -------~~--~--vs----~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~~-~~g~~~~~~ 359 (477)
+. + .+ .+.-++....+... -+++..++.-+..+++.+.+++. ++++..+ .-+..+ ++
T Consensus 391 ~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~-----G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~l~iVc-Fr 464 (539)
T PLN02590 391 KKDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSE-----NLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVC-FR 464 (539)
T ss_pred ccccCCCccccCCCCCCchHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceEEEE-EE
Confidence 00 0 11 12222222333222 24555556667778888888776 6776654 443333 44
Q ss_pred ccc-hhhccCch-HHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccC--CHHHHHHHHHHHHHHHhhh
Q 011801 360 LRH-LLKEKTLE-GEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANM--DDDTLQVALNRIAAFVQQD 427 (477)
Q Consensus 360 l~~-~~~~~~~~-~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~--~~e~l~~~l~~l~~~~~~~ 427 (477)
+.+ .......+ --.++.+++.+.-.+.+.+.. . .+..++|+|+.+. ++++++.+++.|.+...+.
T Consensus 465 ~~~~~~~~~~~~~ln~~l~~~l~~~G~~~vs~t~-~--~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~~ 533 (539)
T PLN02590 465 LAPVDGDEDQCNERNRELLAAVNSTGKIFISHTA-L--SGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASKF 533 (539)
T ss_pred ecCCCCCHHHHHHHHHHHHHHHHhCCCEEEEeeE-E--CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Confidence 432 11110001 112455566555445554432 1 2345899999875 7999999999999886553
No 267
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.73 E-value=1.3e-15 Score=149.51 Aligned_cols=334 Identities=17% Similarity=0.226 Sum_probs=207.2
Q ss_pred CCCCcccccc--ccccccc--cHHHHHHHHHhCCCCcccccccccccccccc-cCCCCCcHHHHHHHHHHHhcccCCCCc
Q 011801 34 TQNPGGVIQL--GLAENQL--CFDLIKDWITKNPYASICTAEGVEVFKDIAI-FQDYHGLPEFRQAVAKFMGKGRGGRVT 108 (477)
Q Consensus 34 ~~~~~~~i~l--~~~~n~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-Y~~~~G~~~lr~aia~~~~~~~g~~~~ 108 (477)
+.+....||| |.+.|.+ +.|.+.+.+++..+. +-..++ | ..+.+.++|+.+.+..+
T Consensus 38 D~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~k----------l~h~sn~~-----~~~~~~~la~~L~~~s~---- 98 (404)
T COG4992 38 DQQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEK----------LWHVSNLF-----YNEPQAELAEKLVELSP---- 98 (404)
T ss_pred CCCCCEeeeeccceeeeccCCCCHHHHHHHHHHHHH----------hhhccccc-----CChHHHHHHHHHHhhCc----
Confidence 4567778998 4566777 457777777763221 111122 2 13555666666654311
Q ss_pred cCCCcEEEeCChHHHHHHHHHHh---cC-C-CCeEEEcCCCccchHHHHhhhCCcE-EE--EEeccCC---CCcccCHHH
Q 011801 109 FDPDRIVMGGGATGANELIMFCL---AN-P-GDAFLVPSPYYAAFDRDLSWRTGVQ-IV--PVHCDIS---NNFKITREA 177 (477)
Q Consensus 109 ~~~~~i~~t~G~t~al~~i~~~l---~~-~-Gd~vlv~~P~y~~~~~~~~~~~g~~-~~--~v~~~~~---~~f~i~~~~ 177 (477)
..|+|+++|+++||++.++..- .. + ..+|+...-+|++-.-..-..+|-. .. .-|+.+. -.|+ |+++
T Consensus 99 -~~d~vff~NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfn-Di~a 176 (404)
T COG4992 99 -FADRVFFCNSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFN-DIEA 176 (404)
T ss_pred -cccEEEEcCCcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCC-CHHH
Confidence 3689999999999999999764 22 2 2378888888866332111111111 00 0011110 1122 7899
Q ss_pred HHHHHHHHHHhCCCeeEEEEeCCCCCcccCCC-HHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCC
Q 011801 178 LEAAYERAQEASINIKGLIITNPSNPLGTTLD-RDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCN 256 (477)
Q Consensus 178 l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~-~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~ 256 (477)
+++++.+ ++.+|++.--.--.|...+ .+-++++-++|++||+++|.||+..++.-.+.-|.- +..+..
T Consensus 177 l~~ai~~------~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~-----e~~gV~ 245 (404)
T COG4992 177 LEAAIDE------DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAY-----EHYGVE 245 (404)
T ss_pred HHHHhcc------CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHH-----HHhCCC
Confidence 9999976 7888887755777887654 455999999999999999999999986555543221 111113
Q ss_pred CCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHH---hcccCCCchHHHHHHHHhcC---ChhhHHHHHHHHHHHHH
Q 011801 257 RDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRK---MSSFGLVSSQTQYLLASMLS---DDEFVDNFLVETSKRLA 330 (477)
Q Consensus 257 ~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~---~~~~~~vs~~~q~~~~~~L~---~~~~~~~~~~~~~~~l~ 330 (477)
+| +.++.|.+| .|+.+|.+++. +.+...+.. -+.|+ .++++.+++.+.|+ ++++ ++ +.+
T Consensus 246 PD----I~tlaK~Lg-GG~PigA~la~-~~~~~~~~~G~HgSTfG-GNpLacAv~~a~l~~l~~e~l----l~----~v~ 310 (404)
T COG4992 246 PD----ILTLAKALG-GGFPIGAMLAT-EEIASAFTPGDHGSTFG-GNPLACAVALAVLEVLLEEGL----LE----NVR 310 (404)
T ss_pred CC----EEEeecccc-CCccceeeEEc-hhhhhcCCCCcccCCCC-cCHHHHHHHHHHHHHHcchhH----HH----HHH
Confidence 33 337889999 99999999996 443333221 23444 56666666555544 4333 22 233
Q ss_pred HHHHHHHHHHhhC----CCeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEec
Q 011801 331 KRHHNFTKGLEQV----GINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFA 406 (477)
Q Consensus 331 ~r~~~l~~~L~~~----gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~ 406 (477)
+.-++|.+.|.++ ++-..-..-|+++-+.+...... .++.+.+. +.||++.+. ++..+|+...
T Consensus 311 ~~g~~~~~~L~~l~~~~~~v~~vRG~GLmiGiel~~~~~a------~~~~~~~~-~~gvL~~~a------~~~ViR~~Pp 377 (404)
T COG4992 311 EKGEYLLQRLRELKRRYPLVKEVRGRGLMIGIELKEPYRA------RDIVRALR-EEGVLVLPA------GPNVIRFLPP 377 (404)
T ss_pred HHHHHHHHHHHHHhhcCCceeeeecceeEEEEEecCcccH------HHHHHHHH-HCCeEEecC------CCCeEEecCC
Confidence 4445555656554 21111234578998888754211 13555555 559998764 3568999987
Q ss_pred cC-CHHHHHHHHHHHHHHHhhh
Q 011801 407 NM-DDDTLQVALNRIAAFVQQD 427 (477)
Q Consensus 407 ~~-~~e~l~~~l~~l~~~~~~~ 427 (477)
.. ++|++++++++|++++.+.
T Consensus 378 L~i~~eei~~~~~~l~~~l~~~ 399 (404)
T COG4992 378 LVITEEEIDEALDALERALAAA 399 (404)
T ss_pred ccCCHHHHHHHHHHHHHHHHHh
Confidence 75 9999999999999999763
No 268
>PRK02769 histidine decarboxylase; Provisional
Probab=99.73 E-value=3.8e-15 Score=150.57 Aligned_cols=292 Identities=10% Similarity=0.050 Sum_probs=195.6
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcE--EEeCChHHHHHHHHHHh--cCCCCeEEEcCCCccchHHHHhhhCCcEEEEE
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRI--VMGGGATGANELIMFCL--ANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPV 163 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i--~~t~G~t~al~~i~~~l--~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v 163 (477)
..++.+.+.+++.+..| .+++++ ++|+|+|+++..++... ..+++.|+++.-.|......++.. |.+...+
T Consensus 63 ~~~~e~~~~~~~a~l~g----~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~l-g~~~~~V 137 (380)
T PRK02769 63 SFDFERDVMNFFAELFK----IPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLL-RIKSRVI 137 (380)
T ss_pred hHHHHHHHHHHHHHHhC----CCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHc-CCCCcee
Confidence 45666666666666555 444444 88999999987665443 257889999999999998888776 8888888
Q ss_pred eccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcC---eEEEecccccccccCC
Q 011801 164 HCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKN---IHLVCDEIYAATVFSS 240 (477)
Q Consensus 164 ~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~---~~lI~De~y~~~~~~~ 240 (477)
++++ ++.+|+++|++++++. +.++.+|+++.++|+||.+-| +++|.++|+++| +++++|.++++....-
T Consensus 138 ~~~~--~g~id~~~L~~~i~~~---~~~t~lvv~t~gtt~tG~idp---i~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~ 209 (380)
T PRK02769 138 TSLP--NGEIDYDDLISKIKEN---KNQPPIIFANIGTTMTGAIDN---IKEIQEILKKIGIDDYYIHADAALSGMILPF 209 (380)
T ss_pred ccCC--CCcCcHHHHHHHHHhC---CCCcEEEEEEeCCCCCcccCC---HHHHHHHHHHhCCCceEEEEEecccceeecc
Confidence 8764 5679999999999763 446889999999999999999 777888888998 7999999998743211
Q ss_pred CCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhcc---------cCCCc---hHHHHHH
Q 011801 241 PKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSS---------FGLVS---SQTQYLL 308 (477)
Q Consensus 241 ~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~~---------~~~vs---~~~q~~~ 308 (477)
........+ ..+...+..|.+|.+| ....+|.++..++.+... ..... .++-+ .+..+++
T Consensus 210 ~~~~~~~d~------~~~vDsis~s~HK~~~-~P~g~G~l~~r~~~~~~~-~~~~~yl~~~d~t~~GSR~g~~~l~lw~a 281 (380)
T PRK02769 210 VNNPPPFSF------ADGIDSIAISGHKFIG-SPMPCGIVLAKKKYVERI-SVDVDYIGSRDQTISGSRNGHTALLLWAA 281 (380)
T ss_pred cCccccCCc------cCCCCEEEECCcccCC-CCCCcEEEEEehhhhhhc-ccCccccCCCCCCccCCCCcHHHHHHHHH
Confidence 000000001 1134466789999886 456799999876544332 11111 11112 2233333
Q ss_pred HHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEe
Q 011801 309 ASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVS 388 (477)
Q Consensus 309 ~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~ 388 (477)
...+.... +++..++..+..+++.+.|++.|+++......+.+.++.+. + ++ . .|..+.
T Consensus 282 L~~lg~~G-----~~~~~~~~~~la~~l~~~L~~~g~~~~~~p~~~~v~f~~~~--------~--~~----~--~~w~l~ 340 (380)
T PRK02769 282 IRSLGSKG-----LRQRVQHCLDMAQYAVDRLQANGIPAWRNPNSITVVFPCPS--------E--RI----W--KKWHLA 340 (380)
T ss_pred HHHHCHHH-----HHHHHHHHHHHHHHHHHHHHhCCCEEEcCCCceEEEEcCCC--------H--HH----H--hCeeEc
Confidence 33333332 45666777788889999999889887664444555555442 1 11 2 255554
Q ss_pred CCCCCCCCCCCEEEEEeccC-CHHHHHHHHHHHHHHHhhhh
Q 011801 389 PGSSFQCTEPGWFRVCFANM-DDDTLQVALNRIAAFVQQDK 428 (477)
Q Consensus 389 pg~~f~~~~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~~~~ 428 (477)
+- ++++|+++... +.+.++.+++.|...+...+
T Consensus 341 ~~-------~~~~hi~~~~~~~~~~~~~f~~dl~~~~~~~~ 374 (380)
T PRK02769 341 TS-------GNQAHIITMPHHNKQQIDSLIDELIFDLKNPN 374 (380)
T ss_pred cc-------CCEEEEEECCCCCHHHHHHHHHHHHHHHhccc
Confidence 32 34799999654 88899999999988876533
No 269
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.72 E-value=3.8e-15 Score=153.60 Aligned_cols=172 Identities=20% Similarity=0.293 Sum_probs=130.9
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHh---------cCCCCeEEEcCCCccchHHHHhhhCCc
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCL---------ANPGDAFLVPSPYYAAFDRDLSWRTGV 158 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l---------~~~Gd~vlv~~P~y~~~~~~~~~~~g~ 158 (477)
..+|++++|++++ .+++++++|+++|+.+++.++ .+|||.|+++.|+|+.+...+... |+
T Consensus 65 ~~~fe~~lA~~~g----------~~~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~-G~ 133 (438)
T PRK15407 65 NDAFEKKLAEFLG----------VRYALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQN-GL 133 (438)
T ss_pred HHHHHHHHHHHhC----------CCeEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHc-CC
Confidence 4899999999986 246999999999999998876 478999999999999998888776 99
Q ss_pred EEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEeccccccc-c
Q 011801 159 QIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAAT-V 237 (477)
Q Consensus 159 ~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~-~ 237 (477)
+++.++++. .+|.+|++++++++.+ ++|+|+++++ +|...+ +++|.++|+++|++||+|++++.. .
T Consensus 134 ~pv~vdvd~-~~~~id~~~le~~i~~------~tkaVi~~~~---~G~p~d---l~~I~~la~~~gi~vIeDaa~a~G~~ 200 (438)
T PRK15407 134 VPVFVDVEL-PTYNIDASLLEAAVSP------KTKAIMIAHT---LGNPFD---LAAVKAFCDKHNLWLIEDNCDALGST 200 (438)
T ss_pred EEEEEecCC-CcCCcCHHHHHHHcCc------CCeEEEEeCC---CCChhh---HHHHHHHHHHCCCEEEEECccchhhh
Confidence 999998874 4688999999998754 7899998864 565444 888999999999999999999732 1
Q ss_pred cCCCCcccHHHhhhhccCCCCcEEEEecCC--cccCCCCceEEEEEeCCHHHHHHHHHhccc
Q 011801 238 FSSPKFTSVAEVIQEMDCNRDLIHIIYSLS--KDMGLPGFRVGIVYSFNDTVVNCGRKMSSF 297 (477)
Q Consensus 238 ~~~~~~~s~~~~~~~~~~~~~~viiv~SlS--K~~g~~G~RvG~i~~~~~~i~~~~~~~~~~ 297 (477)
+.+...- ..+ .+.+.||+ |.+. .|- -|+|+.+++.+.+.++.+..+
T Consensus 201 ~~g~~~G-----------~~g-d~~~fSf~~~k~~~-~ge-GG~l~t~d~~l~~~~~~~~~~ 248 (438)
T PRK15407 201 YDGRMTG-----------TFG-DIATLSFYPAHHIT-MGE-GGAVFTNDPLLKKIIESFRDW 248 (438)
T ss_pred cCCeeee-----------ccC-ceEEEeCCCCCCcc-ccC-ceEEEECCHHHHHHHHHHHHh
Confidence 2221111 111 24456664 6664 343 599999988887766655443
No 270
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.72 E-value=6.1e-15 Score=149.05 Aligned_cols=208 Identities=14% Similarity=0.118 Sum_probs=149.3
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHH----hhhCCcEEEEE
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDL----SWRTGVQIVPV 163 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~----~~~~g~~~~~v 163 (477)
...|.+.+|+.-+ .+..+++++++.|+.+++.+++++||.|+++...|.+....+ +.. |+++..+
T Consensus 64 ~~~le~~la~LEg----------~~~a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~-Gi~v~~v 132 (395)
T PRK08114 64 HFSLQEAMCELEG----------GAGCALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKL-GVTTTWF 132 (395)
T ss_pred HHHHHHHHHHHhC----------CCeEEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhc-CcEEEEE
Confidence 4577777777643 457888888999999999999999999999998897766544 434 9998877
Q ss_pred eccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc--CeEEEecccccccccCCC
Q 011801 164 HCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDK--NIHLVCDEIYAATVFSSP 241 (477)
Q Consensus 164 ~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~--~~~lI~De~y~~~~~~~~ 241 (477)
+. .|.+++++++++ ++|+|++..|+||+|.+.+ +++|+++|+++ |+.+|+|.+++.-.+
T Consensus 133 d~-------~d~~~l~~~l~~------~TrlV~~EtpsNp~~~v~D---I~~Ia~ia~~~g~g~~lvVDnT~a~p~~--- 193 (395)
T PRK08114 133 DP-------LIGADIAKLIQP------NTKVVFLESPGSITMEVHD---VPAIVAAVRSVNPDAVIMIDNTWAAGVL--- 193 (395)
T ss_pred CC-------CCHHHHHHhcCC------CceEEEEECCCCCCCEeec---HHHHHHHHHHhCCCCEEEEECCCccccc---
Confidence 63 257888888754 7899999999999999999 88899999998 499999999973211
Q ss_pred CcccHHHhhhhccCCCCcEEEEecCCcccCCCC-ceEEEEEeCCHHHHHHHH-HhcccC-CCchHHHHHHHHhcCChhhH
Q 011801 242 KFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPG-FRVGIVYSFNDTVVNCGR-KMSSFG-LVSSQTQYLLASMLSDDEFV 318 (477)
Q Consensus 242 ~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G-~RvG~i~~~~~~i~~~~~-~~~~~~-~vs~~~q~~~~~~L~~~~~~ 318 (477)
.... ..+..++++|.+|.++-+| .-.|.++.+++ ..+.++ .....+ .+++...+++.+-|+.-.
T Consensus 194 --~~pl--------~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~~-~~~~l~~~~~~~G~~~~p~~a~l~~rgl~TL~-- 260 (395)
T PRK08114 194 --FKAL--------DFGIDISIQAGTKYLVGHSDAMIGTAVANAR-CWEQLRENSYLMGQMVDADTAYMTSRGLRTLG-- 260 (395)
T ss_pred --cCHH--------HcCCcEEEEcCcccccCCCcceeEEEEcCHH-HHHHHHHHHHhccCCCCHHHHHHHHcCCCcHH--
Confidence 1111 2355689999999765444 67786666443 333232 222222 356777777767676633
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhC
Q 011801 319 DNFLVETSKRLAKRHHNFTKGLEQV 343 (477)
Q Consensus 319 ~~~~~~~~~~l~~r~~~l~~~L~~~ 343 (477)
-+.++..+....+.+.|+++
T Consensus 261 -----lR~~~~~~na~~va~~L~~h 280 (395)
T PRK08114 261 -----VRLRQHEESSLKVAEWLAEH 280 (395)
T ss_pred -----HHHHHHHHHHHHHHHHHHcC
Confidence 33445566667788888876
No 271
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.72 E-value=5.6e-15 Score=146.44 Aligned_cols=173 Identities=23% Similarity=0.352 Sum_probs=137.6
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCCccchHHHHhhhCCcEEEEEecc
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCL-ANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCD 166 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l-~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~ 166 (477)
..+|.+++|+|++ ....+.++++|.|+++++.+| .+|||.|++|.-+|......+.+. |++++.+++|
T Consensus 36 v~~FE~~~ae~~G----------~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps~TfvATan~i~~~-Ga~PVFvDid 104 (374)
T COG0399 36 VRRFEQAFAEYLG----------VKYAVAVSSGTAALHLALLALAIGPGDEVIVPSFTFVATANAVLLV-GAKPVFVDID 104 (374)
T ss_pred HHHHHHHHHHHhC----------CCeEEEecChHHHHHHHHHhcCCCCCCEEEecCCchHHHHHHHHHc-CCeEEEEecC
Confidence 5899999999997 567888899999999999966 599999999999999999888887 9999999998
Q ss_pred CCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEeccccccc-ccCCCCccc
Q 011801 167 ISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAAT-VFSSPKFTS 245 (477)
Q Consensus 167 ~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~-~~~~~~~~s 245 (477)
+ +.|++|++.+|+++.+ ++|+|+.. +-.|...+ +++|.++|++||++||+|.+.+-. .|.+...-+
T Consensus 105 ~-~T~nid~~~ie~aIt~------~tKAIipV---hl~G~~~d---m~~i~~la~~~~l~vIEDaAqa~Ga~y~gk~vGt 171 (374)
T COG0399 105 P-DTLNIDPDLIEAAITP------RTKAIIPV---HLAGQPCD---MDAIMALAKRHGLPVIEDAAQAHGATYKGKKVGS 171 (374)
T ss_pred C-cccCCCHHHHHHHccc------CCeEEEEe---hhccCCCC---HHHHHHHHHHcCCeEEEEcchhccCeecCccccc
Confidence 6 5789999999999986 79999866 55788888 677777788999999999998721 122222111
Q ss_pred HHHhhhhccCCCCcEEEEecC--CcccCCCCceEEEEEeCCHHHHHHHHHhcccC
Q 011801 246 VAEVIQEMDCNRDLIHIIYSL--SKDMGLPGFRVGIVYSFNDTVVNCGRKMSSFG 298 (477)
Q Consensus 246 ~~~~~~~~~~~~~~viiv~Sl--SK~~g~~G~RvG~i~~~~~~i~~~~~~~~~~~ 298 (477)
.+ .+.+.|| +|.++ .| --|.|+++++.+.+.++.++..+
T Consensus 172 -----------~G-d~~~fSF~~~K~it-tg-EGGav~tnd~ela~k~~~lr~hG 212 (374)
T COG0399 172 -----------FG-DIGAFSFHATKNLT-TG-EGGAVVTNDEELAEKARSLRNHG 212 (374)
T ss_pred -----------cc-ceEEEEecCCCCcc-cc-CceEEEeCCHHHHHHHHHHHHhC
Confidence 11 2345566 69998 55 67999999988888777665443
No 272
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.71 E-value=3.1e-15 Score=165.34 Aligned_cols=308 Identities=13% Similarity=0.106 Sum_probs=190.8
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCC--cEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCCccchHHH---HhhhCCcEEE
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPD--RIVMGGGATGANELIMFCL-ANPGDAFLVPSPYYAAFDRD---LSWRTGVQIV 161 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~--~i~~t~G~t~al~~i~~~l-~~~Gd~vlv~~P~y~~~~~~---~~~~~g~~~~ 161 (477)
+.+.|+.||+|++ .+++ .|++|+|+|+|+.+++..+ .++||.|++..-.|+..... ++.. |+++.
T Consensus 80 ~e~aR~~ia~~lg--------a~~~~~~VvFtsnaT~alnlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~-G~~v~ 150 (805)
T PLN02724 80 IESARQQVLEYFN--------APPSDYACVFTSGATAALKLVGETFPWSSESHFCYTLENHNSVLGIREYALEK-GAAAI 150 (805)
T ss_pred HHHHHHHHHHHhC--------CCccceEEEEeCChHHHHHHHHHHCCCCCCCeEEEeeccccchHHHHHHHHHc-CCeEE
Confidence 6788999999987 4454 5899999999999999887 67899999977667654432 2333 88888
Q ss_pred EEeccCC------CCcccC--HHHHHHHHHH----HHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc-----C
Q 011801 162 PVHCDIS------NNFKIT--REALEAAYER----AQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDK-----N 224 (477)
Q Consensus 162 ~v~~~~~------~~f~i~--~~~l~~~~~~----~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~-----~ 224 (477)
.++++.. ....++ .++|++.++. ....+.++++|.++.-+|-||.++|.+++..+.+.+.++ +
T Consensus 151 ~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~ 230 (805)
T PLN02724 151 AVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGR 230 (805)
T ss_pred eccchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcc
Confidence 8877521 111222 2556654321 011123668999999999999999966544444433222 3
Q ss_pred eEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHh-cc-------
Q 011801 225 IHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKM-SS------- 296 (477)
Q Consensus 225 ~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~-~~------- 296 (477)
+++++|.+.+. .. ....+.++ +..+++.|++|.+|.| ..+|+++..++.+.. +... ..
T Consensus 231 ~~v~vDaaQ~~---g~-~piDv~~~--------~~Dfl~~S~HK~~GgP-~G~G~L~vr~~~~~~-l~p~~~GGg~~~~~ 296 (805)
T PLN02724 231 WMVLLDAAKGC---GT-SPPDLSRY--------PADFVVVSFYKIFGYP-TGLGALLVRRDAAKL-LKKKYFGGGTVAAS 296 (805)
T ss_pred eEEEeehhhhc---CC-CCCChhhc--------CCCEEEEecceeccCC-CCceEEEEehhhhhh-hcCCccCCCceEEE
Confidence 68999999862 22 22343322 4457888999999822 348999986654332 2211 00
Q ss_pred ------------------cCCCchHHHHHHHHhcCChhhHHH-HHHHHHHHHHHHHHHHHHHHhhC-------CCeEecC
Q 011801 297 ------------------FGLVSSQTQYLLASMLSDDEFVDN-FLVETSKRLAKRHHNFTKGLEQV-------GINCLKS 350 (477)
Q Consensus 297 ------------------~~~vs~~~q~~~~~~L~~~~~~~~-~~~~~~~~l~~r~~~l~~~L~~~-------gi~~~~~ 350 (477)
.|+.+.....++.+.++ ++.+ -+++..++..+..+++.+.|.++ ++.++.+
T Consensus 297 ~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~---~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~ 373 (805)
T PLN02724 297 IADIDFVKRRERVEQRFEDGTISFLSIAALRHGFK---LLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGN 373 (805)
T ss_pred ecccceeeccccHHHHhcCCCcchhHHHHHHHHHH---HHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCC
Confidence 01222222233333332 2121 23455667777778888888876 3566643
Q ss_pred C--------ceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCC--------------------------
Q 011801 351 N--------AGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCT-------------------------- 396 (477)
Q Consensus 351 ~--------~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~-------------------------- 396 (477)
. .+-.+.+.+... +...+.. .....++.++||.++.|..|.+.
T Consensus 374 ~~~~~~~~~r~~ivsFnv~~~-~~~~v~~--~~v~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~ 450 (805)
T PLN02724 374 HTFKLEFHIQGPIVTFNLKRA-DGSWVGH--REVEKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDD 450 (805)
T ss_pred CCCCCCcccccCEEEEEEEcC-CCCEeCH--HHHHHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCch
Confidence 2 123444444431 1111111 12455677889999999887521
Q ss_pred -------CCCEEEEEeccC-CHHHHHHHHHHHHHHH
Q 011801 397 -------EPGWFRVCFANM-DDDTLQVALNRIAAFV 424 (477)
Q Consensus 397 -------~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~ 424 (477)
..|++|+||+.+ +.++++.+++.|++..
T Consensus 451 ~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~ 486 (805)
T PLN02724 451 QDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSF 486 (805)
T ss_pred hheecCcccceEEEEcCccCCHHHHHHHHHHHHHHh
Confidence 138999999987 8999999999999955
No 273
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.71 E-value=1.2e-14 Score=149.89 Aligned_cols=289 Identities=15% Similarity=0.118 Sum_probs=166.2
Q ss_pred cEEE-eCChHHHHHHHHHHhc--CCCCeEEEcCCCccchHHHHhhhCC---------c---EEEEEeccCCCCcc-cCHH
Q 011801 113 RIVM-GGGATGANELIMFCLA--NPGDAFLVPSPYYAAFDRDLSWRTG---------V---QIVPVHCDISNNFK-ITRE 176 (477)
Q Consensus 113 ~i~~-t~G~t~al~~i~~~l~--~~Gd~vlv~~P~y~~~~~~~~~~~g---------~---~~~~v~~~~~~~f~-i~~~ 176 (477)
.+++ ++++++|++.+++... ....+|+...-+|++.....-..+| . .+..+|........ -+++
T Consensus 104 ~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 183 (425)
T PRK09264 104 KVQFTGPTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLA 183 (425)
T ss_pred eEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHH
Confidence 5656 5899999999887642 2235788888888876432211111 0 12333332100000 1567
Q ss_pred HHHHHHHHHHHhCCCeeEEEEeCCCCCccc-CCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccC
Q 011801 177 ALEAAYERAQEASINIKGLIITNPSNPLGT-TLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDC 255 (477)
Q Consensus 177 ~l~~~~~~~~~~~~~~k~vii~nP~NPtG~-~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~ 255 (477)
++++.+++......++.+|++.--..-.|. +.+.+.+++|.++|++||+++|+||++.++...+..+ .... .+.
T Consensus 184 ~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~-~~~~----~~v 258 (425)
T PRK09264 184 YLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFF-SFER----AGI 258 (425)
T ss_pred HHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHH-HHhh----cCC
Confidence 777777543111125666665533455675 5688899999999999999999999998754333221 1111 112
Q ss_pred CCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHH--HhcccCCCchHHHHHHHHhc----CChhhHHHHHHHHHHHH
Q 011801 256 NRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGR--KMSSFGLVSSQTQYLLASML----SDDEFVDNFLVETSKRL 329 (477)
Q Consensus 256 ~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~--~~~~~~~vs~~~q~~~~~~L----~~~~~~~~~~~~~~~~l 329 (477)
.+| +.+|||.+|..|+++|+++++++ +..... ....|+ .++++..++.+.| .++++ .+++++..+.+
T Consensus 259 ~PD----i~t~~K~l~~~G~pigav~~~~~-i~~~~~~~~~~T~~-gnp~~~aaa~a~l~~~~~~~~l-~~~~~~~g~~l 331 (425)
T PRK09264 259 TPD----IVTLSKSISGYGLPMALVLIKPE-LDVWKPGEHNGTFR-GNNLAFVTATAALEEYWSDDAF-EKEVKAKGELV 331 (425)
T ss_pred CCC----EEEeccccCCCccceEEEEEchh-hhccCCCccCCCCC-CCHHHHHHHHHHHHHHHhhhHH-HHHHHHHHHHH
Confidence 344 23779999944999999999755 332111 112222 3444444333333 33333 33344444444
Q ss_pred HHHHHHHHHHHhhCC-CeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEecc-
Q 011801 330 AKRHHNFTKGLEQVG-INCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFAN- 407 (477)
Q Consensus 330 ~~r~~~l~~~L~~~g-i~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~- 407 (477)
+++.+.+.+ +.+ +.......|+++|+.++... ....++..++ +.||.+.++..+ ...+|++...
T Consensus 332 ~~~l~~l~~---~~~~~~~~vrg~Gl~~~i~l~~~~------~~~~l~~~~~-~~Gv~~~~~~~~----~~~lr~~p~l~ 397 (425)
T PRK09264 332 RERLEEIAA---KYPGLGAEVRGRGMMQGIDFGDGE------LAGKIAAEAF-ENGLIIETSGPE----DEVVKLLPPLT 397 (425)
T ss_pred HHHHHHHHH---hCCCceecceecccEEEEEecChH------HHHHHHHHHH-HCCCEEeccCCC----CCEEEEeCCCC
Confidence 443333322 222 11122346789999986421 1124555555 459999875432 3578888654
Q ss_pred CCHHHHHHHHHHHHHHHhhh
Q 011801 408 MDDDTLQVALNRIAAFVQQD 427 (477)
Q Consensus 408 ~~~e~l~~~l~~l~~~~~~~ 427 (477)
++++++++++++|++++++.
T Consensus 398 ~t~~ei~~~~~~l~~~l~~~ 417 (425)
T PRK09264 398 IDEEELEEGLDILEEAVAEV 417 (425)
T ss_pred CCHHHHHHHHHHHHHHHHHH
Confidence 38999999999999998653
No 274
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.70 E-value=7.9e-15 Score=161.61 Aligned_cols=315 Identities=17% Similarity=0.163 Sum_probs=206.2
Q ss_pred cccccccCCC---CCcH----HHHHHHHHHHhcccCCCCccCCCcEEEeCChH----HHHHHHHHHhcCC-CC----eEE
Q 011801 76 FKDIAIFQDY---HGLP----EFRQAVAKFMGKGRGGRVTFDPDRIVMGGGAT----GANELIMFCLANP-GD----AFL 139 (477)
Q Consensus 76 ~~~~~~Y~~~---~G~~----~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t----~al~~i~~~l~~~-Gd----~vl 139 (477)
|..+.-|+|. +|+. ++|+.++++++ .+.|.++++++ +++.++++.+.++ || .|+
T Consensus 551 ~~~~hp~~p~~~~~g~~~~~~~~r~~la~i~g----------~~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vl 620 (993)
T PLN02414 551 FANIHPFAPVDQAQGYQEMFEDLGDLLCEITG----------FDSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCI 620 (993)
T ss_pred hhhcCCCCCHHHHHHHHHHHHHHHHHHHHHhC----------CCeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEE
Confidence 3445555553 3444 55555555554 38999999998 8999999998766 88 899
Q ss_pred EcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHH
Q 011801 140 VPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSF 219 (477)
Q Consensus 140 v~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~ 219 (477)
++...+......+... |++++.++++. +..+|+++|++++++. ..++++|++++|||-+|...+ +++|+++
T Consensus 621 i~~~aH~sn~a~a~~~-G~~vv~v~~d~--~G~vDle~L~~~i~~~---~~~ta~V~vt~pSn~gg~e~~---I~eI~~i 691 (993)
T PLN02414 621 IPVSAHGTNPASAAMC-GMKIVVVGTDA--KGNINIEELRKAAEAH---KDNLAALMVTYPSTHGVYEEG---IDEICDI 691 (993)
T ss_pred eCCCcCccCHHHHHHC-CCEEEEeccCC--CCCcCHHHHHHHHhcc---CCCeEEEEEECCCccccccch---HHHHHHH
Confidence 9999998888777765 99999999974 3479999999999742 126899999999999999977 8899999
Q ss_pred HHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccC----CCCceEEEEEeCCHHHHHHHH---
Q 011801 220 INDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMG----LPGFRVGIVYSFNDTVVNCGR--- 292 (477)
Q Consensus 220 ~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g----~~G~RvG~i~~~~~~i~~~~~--- 292 (477)
|+++|+++++|.++..-... ..... ..+..++++|.+|.|+ ..|-.+|++++.+. +...+-
T Consensus 692 ah~~Galv~vDgAq~~a~~~---l~~p~--------~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~-L~p~lPg~~ 759 (993)
T PLN02414 692 IHDNGGQVYMDGANMNAQVG---LTSPG--------FIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH-LAPFLPSHP 759 (993)
T ss_pred HHHcCCEEEEEecCHHhccC---cCCcc--------ccCCCEEEecCCccCCcCcccCCCCeeeEEEchh-hcccCCCCc
Confidence 99999999999999532111 11111 2355678889999775 33456899988543 222111
Q ss_pred -----------HhcccCCCch--HHHH----HHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEecCCceE
Q 011801 293 -----------KMSSFGLVSS--QTQY----LLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLKSNAGL 354 (477)
Q Consensus 293 -----------~~~~~~~vs~--~~q~----~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~~~~g~ 354 (477)
+-++.++++. ..|. .+..++..-. .+-+++..++...+..++.+.|.+. ++.+..+.+..
T Consensus 760 v~~~~~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG--~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~~~~~~ 837 (993)
T PLN02414 760 VVPTGGIPRPEKTQPLGTISAAPWGSALILPISYTYIAMMG--SEGLTDASKIAILNANYMAKRLEGHYPVLFRGKNGTC 837 (993)
T ss_pred cccCCCcccccCCCCcCCccchhhhhHHHHHHHHHHHHHHC--HhHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCe
Confidence 0011222221 1111 1122222211 2235666677777888899988763 44443333321
Q ss_pred E--EEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccC-CHHHHHHHHHHHHHHHhhhh
Q 011801 355 F--FWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANM-DDDTLQVALNRIAAFVQQDK 428 (477)
Q Consensus 355 ~--~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~~~~ 428 (477)
| +.++++...+..... ..++.++|+ ++||..- ...| ..++++||+.... +.+++|+++++|+.+.++.+
T Consensus 838 ~hEfv~~~~~l~~~~g~~-~~di~krL~-d~Gihap-t~~~--pv~~~lmiepTE~~skeelDrf~~al~~i~~e~~ 909 (993)
T PLN02414 838 AHEFIIDLRPFKNTAGIE-PEDVAKRLM-DYGFHAP-TMSW--PVPGTLMIEPTESESKAELDRFCDALISIREEIA 909 (993)
T ss_pred eeeEEEeccccccccCCC-HHHHHHHHH-HcCcEEe-eecc--ccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHH
Confidence 1 234555322111112 235778888 7799753 3334 2478999999765 89999999999998886654
No 275
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.69 E-value=2.6e-14 Score=148.47 Aligned_cols=278 Identities=13% Similarity=0.087 Sum_probs=166.9
Q ss_pred CChHHHHHHHHHHhcCCCCeEEEcCCCccchHH-H-----Hhhh-CCc--EEEEEeccCCCCcccCHHHHHHHHHHHHHh
Q 011801 118 GGATGANELIMFCLANPGDAFLVPSPYYAAFDR-D-----LSWR-TGV--QIVPVHCDISNNFKITREALEAAYERAQEA 188 (477)
Q Consensus 118 ~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~-~-----~~~~-~g~--~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~ 188 (477)
.+++.|+..++.+|++|||+|+..+....++.. . .+.. .+. +++++..+. .+..+|+++|++.+++.
T Consensus 107 ~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~-~~g~iD~d~Le~~l~~~--- 182 (475)
T PLN03226 107 LSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDE-STGLIDYDKLEKKAMLF--- 182 (475)
T ss_pred CchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecC-CCCCcCHHHHHHHHhhc---
Confidence 566889999999999999999985532222211 1 1111 011 122444443 35679999999988643
Q ss_pred CCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCc
Q 011801 189 SINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSK 268 (477)
Q Consensus 189 ~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK 268 (477)
++|+|++ ..++ +|...+ +++|.++|+++|+++++|+++...+.......+. + ....++++|++|
T Consensus 183 --~pklIv~-~~S~-~s~~~D---~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p---~------~~~Div~~t~hK 246 (475)
T PLN03226 183 --RPKLIIA-GASA-YPRDWD---YARMRKIADKVGALLMCDMAHISGLVAAQEAASP---F------EYCDVVTTTTHK 246 (475)
T ss_pred --CCeEEEE-ecCc-CCCccC---HHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCC---C------CCCeEEEecCcc
Confidence 6776544 3444 677777 6678888999999999999997543333221110 1 133478899999
Q ss_pred ccCCCCceEEEEEeCCHHH----------HHH---HHHhcc--cCCCchHHH-HHHHHhcCChhhHHHHHHHHHHHHHHH
Q 011801 269 DMGLPGFRVGIVYSFNDTV----------VNC---GRKMSS--FGLVSSQTQ-YLLASMLSDDEFVDNFLVETSKRLAKR 332 (477)
Q Consensus 269 ~~g~~G~RvG~i~~~~~~i----------~~~---~~~~~~--~~~vs~~~q-~~~~~~L~~~~~~~~~~~~~~~~l~~r 332 (477)
++ .|.+-|+|+++++.. .+. ...... +.+...+.+ .+++..|..- .+.-.++.++++.++
T Consensus 247 ~L--~GP~Gg~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i--~~~~~~~~~~~~~~n 322 (475)
T PLN03226 247 SL--RGPRGGMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQA--MTPEFKAYQKQVKAN 322 (475)
T ss_pred cc--cCCCceEEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHH--hCcCHHHHHHHHHHH
Confidence 98 233448888865422 012 111111 211112222 2222222210 011124557788888
Q ss_pred HHHHHHHHhhCCCeEecCC-ceEEEEeeccc-hhhccCchHHHHHHHHHHHhcCeEEeCCCCCC---CCCCCEEEEEe--
Q 011801 333 HHNFTKGLEQVGINCLKSN-AGLFFWMDLRH-LLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQ---CTEPGWFRVCF-- 405 (477)
Q Consensus 333 ~~~l~~~L~~~gi~~~~~~-~g~~~~~~l~~-~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~---~~~~~~~Rl~~-- 405 (477)
.++|.+.|.+.|+++..+. ....+++++.. .+.. .-....+++.||.+..+...+ +-.+..+|++.
T Consensus 323 a~~L~~~L~~~G~~l~~~~t~~hi~lv~~~~~gi~~-------~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~ 395 (475)
T PLN03226 323 AAALANRLMSKGYKLVTGGTDNHLVLWDLRPLGLTG-------SRVEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPA 395 (475)
T ss_pred HHHHHHHHHhCCCEEEcCCCCCCEEEEEccCCCCCH-------HHHHHHHHHCCCEECCCCCCCCcccCCCCCcccCcHH
Confidence 8999999999999887632 23566788743 2221 124556778899987664221 12345689844
Q ss_pred ---ccCCHHHHHHHHHHHHHHHhh
Q 011801 406 ---ANMDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 406 ---~~~~~e~l~~~l~~l~~~~~~ 426 (477)
..+++++++++.+.|.++++.
T Consensus 396 lt~~g~~~~d~~~ia~~i~~~~~~ 419 (475)
T PLN03226 396 MTSRGLVEKDFEKVAEFLHRAVTI 419 (475)
T ss_pred HHHCCCCHHHHHHHHHHHHHHHHH
Confidence 335789999999999999874
No 276
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.69 E-value=3.8e-14 Score=143.25 Aligned_cols=207 Identities=16% Similarity=0.191 Sum_probs=139.4
Q ss_pred CcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchH----HHHhhhCCcEEEE
Q 011801 87 GLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFD----RDLSWRTGVQIVP 162 (477)
Q Consensus 87 G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~----~~~~~~~g~~~~~ 162 (477)
-..+|.+.+|++.+ .+..+++++++.|+.+++.++.++||.|+++.+.|.+.. ..+... |++++.
T Consensus 65 ~~~~lE~~la~leg----------~~~av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~-Gi~v~f 133 (384)
T PRK06434 65 TVQAFEEKYAVLEN----------AEHALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTL-GIHVDY 133 (384)
T ss_pred hHHHHHHHHHHHhC----------CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhc-CcEEEE
Confidence 35788888888875 346788888889999999999999999999988766544 444555 999999
Q ss_pred EeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCC
Q 011801 163 VHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPK 242 (477)
Q Consensus 163 v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~ 242 (477)
++++..+.+.++. .++|+|++..|+|||+.+.+ +++|.++|++++ +++|.+++.. +...+
T Consensus 134 vd~~~~~~~~l~~--------------~~tklv~~e~~snpt~~v~D---i~~I~~la~~~~--lvVD~t~~s~-~~~~p 193 (384)
T PRK06434 134 IDTDRLNSLDFDP--------------SNYDLIYAESITNPTLKVPD---IKNVSSFCHEND--VIVDATFASP-YNQNP 193 (384)
T ss_pred ECCCChhheeecC--------------CCeeEEEEEcCCCCCceeec---HHHHHHHHHHcC--eEEECCCCCc-ccCCc
Confidence 8876433333221 16889999999999999877 888888888988 4669997532 22222
Q ss_pred cccHHHhhhhccCCCCcEEEEecCCcccCCCC-ceEEEEEeCCHHHHHHHHHhc-ccCC-CchHHHHHHHHhcCChhhHH
Q 011801 243 FTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPG-FRVGIVYSFNDTVVNCGRKMS-SFGL-VSSQTQYLLASMLSDDEFVD 319 (477)
Q Consensus 243 ~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G-~RvG~i~~~~~~i~~~~~~~~-~~~~-vs~~~q~~~~~~L~~~~~~~ 319 (477)
+ ..+..++++|.+|.++-+| .=.|.|++.++.+.+.++.+. .++. .+++..+++..-|+.-
T Consensus 194 ---l---------~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~gL~tL---- 257 (384)
T PRK06434 194 ---L---------DLGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLGSNPDPIQAYLALRGLKTL---- 257 (384)
T ss_pred ---h---------hcCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhCCCcH----
Confidence 1 1134578899999996434 446777776666655544332 3443 3555444445555442
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhC
Q 011801 320 NFLVETSKRLAKRHHNFTKGLEQV 343 (477)
Q Consensus 320 ~~~~~~~~~l~~r~~~l~~~L~~~ 343 (477)
..+.++..+....+.+.|+.+
T Consensus 258 ---~~R~~r~~~~a~~~a~~L~~~ 278 (384)
T PRK06434 258 ---GLRMEKHNKNGMELARFLRDS 278 (384)
T ss_pred ---HHHHHHHHHHHHHHHHHHHcC
Confidence 233334455556677777765
No 277
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.69 E-value=2e-14 Score=146.72 Aligned_cols=294 Identities=12% Similarity=0.114 Sum_probs=176.1
Q ss_pred HHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhc------CCC-CeEEEcCCCccchHHHHhhhCCcEEE
Q 011801 89 PEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLA------NPG-DAFLVPSPYYAAFDRDLSWRTGVQIV 161 (477)
Q Consensus 89 ~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~------~~G-d~vlv~~P~y~~~~~~~~~~~g~~~~ 161 (477)
.+....+|+++.+.. ..+++++++++++|++.++.... ++| ..|+..+.+|++........+|....
T Consensus 77 ~~~~~~la~~l~~~~------~~~~v~f~~SGseA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~ 150 (395)
T PRK03715 77 NEPMAKLAGLLTQHS------CFDKVFFANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGW 150 (395)
T ss_pred CHHHHHHHHHHhhcc------CCCEEEEeCCcHHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCccc
Confidence 577888899887532 24689999999999999998764 123 57888888888765433222243211
Q ss_pred EEeccC-CCCcc----cCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCC-CHHHHHHHHHHHHhcCeEEEecccccc
Q 011801 162 PVHCDI-SNNFK----ITREALEAAYERAQEASINIKGLIITNPSNPLGTTL-DRDTLKSLVSFINDKNIHLVCDEIYAA 235 (477)
Q Consensus 162 ~v~~~~-~~~f~----i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~-~~~~l~~l~~~~~~~~~~lI~De~y~~ 235 (477)
.....+ ..+|. .|++++++.+++ ++.+|++....+..|... +.+.+++|.++|+++|+++|+||++.+
T Consensus 151 ~~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG 224 (395)
T PRK03715 151 DTIFAPQVPGFPKAELNDIASVEKLITD------KTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTG 224 (395)
T ss_pred ccCCCCCCCCceeeCCchHHHHHHHcCC------CceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC
Confidence 100000 01111 267888877642 566666664455666654 688899999999999999999999997
Q ss_pred cccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHH--hcccCCCchHHHHHHHHhcC
Q 011801 236 TVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRK--MSSFGLVSSQTQYLLASMLS 313 (477)
Q Consensus 236 ~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~--~~~~~~vs~~~q~~~~~~L~ 313 (477)
+.-.+..+. .+.. +..+| +.+|+|.+| .|+.+|.+++.++. ...... ...|+ .++++..++.+.|+
T Consensus 225 ~GRtG~~~a--~~~~---gv~PD----i~t~gK~lg-~G~p~~av~~~~~i-~~~~~~~~~~T~~-g~pl~~aaala~L~ 292 (395)
T PRK03715 225 CGRTGTLFA--YELS---GIEPD----IMTLGKGIG-GGVPLAALLAKAEV-AVFEAGDQGGTYN-GNPLMTAVGVAVIS 292 (395)
T ss_pred CCCCcchhh--Hhhc---CCCCc----eeeehhhhh-CCcceEEEEEcccc-ccccCCCcCCCCC-CCHHHHHHHHHHHH
Confidence 433333221 1111 11333 348899999 78999999986654 222111 12222 34555444444443
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHhh----CCCeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhc---CeE
Q 011801 314 DDEFVDNFLVETSKRLAKRHHNFTKGLEQ----VGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDV---KLN 386 (477)
Q Consensus 314 ~~~~~~~~~~~~~~~l~~r~~~l~~~L~~----~gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~---gI~ 386 (477)
-- ++ +...+++++.-+++.+.|++ .++.... .-|+++-+.+..... ..+...+.+. ||.
T Consensus 293 ~l---~~--~~l~~~~~~~g~~l~~~L~~l~~~~~i~~vr-G~Glm~~i~l~~~~~--------~~~~~~~~~~~~~Gi~ 358 (395)
T PRK03715 293 QL---LA--PGFLEGVRARGEYLKEKLLELSEERGLEGER-GEGLLRALLLGKDIG--------PQIVEKARDMQPDGLL 358 (395)
T ss_pred HH---Hh--ccHHHHHHHHHHHHHHHHHHHhhcCCcCeEE-cceeEEEEEecCchH--------HHHHHHHHhccCCCEE
Confidence 21 10 12233444444555555543 3543333 346777787753100 1112222334 999
Q ss_pred EeCCCCCCCCCCCEEEEEeccC-CHHHHHHHHHHHHHHHhh
Q 011801 387 VSPGSSFQCTEPGWFRVCFANM-DDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 387 v~pg~~f~~~~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~~ 426 (477)
+.+. .+..+|++.... +++++++++++|++++++
T Consensus 359 ~~~~------~~~~lR~~p~l~~t~~ei~~~~~~l~~~l~~ 393 (395)
T PRK03715 359 LNAP------RPNLLRFMPALNVTTEEIDQMIAMLRSVLDK 393 (395)
T ss_pred Eeec------CCCEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 8643 235799999764 999999999999999865
No 278
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.69 E-value=3.4e-14 Score=146.04 Aligned_cols=156 Identities=20% Similarity=0.281 Sum_probs=115.7
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchH----HHHhhhCCcEEEEE
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFD----RDLSWRTGVQIVPV 163 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~----~~~~~~~g~~~~~v 163 (477)
...|++.+|++.+ . .+.|++++| +.|+.+++.++.++||.|+++...|.+.. ..+... |+++..+
T Consensus 71 ~~~le~~la~l~g--------~-~~~v~fsSG-~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~-Gi~v~~v 139 (437)
T PRK05613 71 VEALENRIASLEG--------G-VHAVAFASG-QAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRL-GIEVTFV 139 (437)
T ss_pred HHHHHHHHHHHhC--------C-CeEEEeCCH-HHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhc-CeEEEEE
Confidence 5678888888875 1 244555555 58888888888899999999999998764 233445 9998888
Q ss_pred eccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCc
Q 011801 164 HCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKF 243 (477)
Q Consensus 164 ~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~ 243 (477)
+ +. .|++++++++++ ++++|++..|+||+|.+.+ +++|.++|+++|+.+|+|.+++...+ +
T Consensus 140 d-~~-----~d~e~l~~~l~~------~tk~V~~e~~~Np~~~v~d---i~~I~~la~~~gi~livD~t~a~g~~----~ 200 (437)
T PRK05613 140 E-NP-----DDPESWQAAVQP------NTKAFFGETFANPQADVLD---IPAVAEVAHRNQVPLIVDNTIATAAL----V 200 (437)
T ss_pred C-CC-----CCHHHHHHhCCc------cCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCeEEEECCCccccc----c
Confidence 7 22 168889888764 7889999999999999999 88888999999999999999863211 1
Q ss_pred ccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEe
Q 011801 244 TSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYS 282 (477)
Q Consensus 244 ~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~ 282 (477)
.+. . .+..+++.|++|.+|-.|--+|.+++
T Consensus 201 ~p~-~--------~GaDivv~S~~K~l~G~gd~~gG~vv 230 (437)
T PRK05613 201 RPL-E--------LGADVVVASLTKFYTGNGSGLGGVLI 230 (437)
T ss_pred ChH-H--------hCCCEEEeeccceecCCCcceeEEEE
Confidence 111 1 13457889999999755655555444
No 279
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.69 E-value=5.9e-14 Score=140.03 Aligned_cols=282 Identities=20% Similarity=0.245 Sum_probs=187.9
Q ss_pred CcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhh---hCCcEEEEE
Q 011801 87 GLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSW---RTGVQIVPV 163 (477)
Q Consensus 87 G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~---~~g~~~~~v 163 (477)
-...|.+++|.+-+ .+..+.++++..|+..++.+|.++||.|+++...|.+..+.+.. ..|+++..+
T Consensus 64 T~~~lE~~~a~LEg----------~~~~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~ 133 (396)
T COG0626 64 TRDALEEALAELEG----------GEDAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFV 133 (396)
T ss_pred cHHHHHHHHHHhhC----------CCcEEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEE
Confidence 35678888888764 46788889999999999999999999999999999886654432 238888776
Q ss_pred eccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCc
Q 011801 164 HCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKF 243 (477)
Q Consensus 164 ~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~ 243 (477)
+.. +.+++++++.+ +++|+|++..|+||+-.+.+ +.+|+++|+++|+++|+|+.|+.-++-.+
T Consensus 134 d~~-------~~~~~~~~~~~-----~~tk~v~lEtPsNP~l~v~D---I~~i~~~A~~~g~~vvVDNTfatP~~q~P-- 196 (396)
T COG0626 134 DPG-------DDEALEAAIKE-----PNTKLVFLETPSNPLLEVPD---IPAIARLAKAYGALVVVDNTFATPVLQRP-- 196 (396)
T ss_pred CCC-------ChHHHHHHhcc-----cCceEEEEeCCCCccccccc---HHHHHHHHHhcCCEEEEECCcccccccCh--
Confidence 632 34556666542 27999999999999999988 88899999999999999999985433322
Q ss_pred ccHHHhhhhccCCCCcEEEEecCCcccCCCC-ceEEEEEeCCHHHHHHH--HHhcccC-CCchHHHHHHHHhcCChhhHH
Q 011801 244 TSVAEVIQEMDCNRDLIHIIYSLSKDMGLPG-FRVGIVYSFNDTVVNCG--RKMSSFG-LVSSQTQYLLASMLSDDEFVD 319 (477)
Q Consensus 244 ~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G-~RvG~i~~~~~~i~~~~--~~~~~~~-~vs~~~q~~~~~~L~~~~~~~ 319 (477)
+ ..+..|+++|.+|.+|=.+ .=.|.++++++.+.+.+ ......+ .+++...+++.+-|+.-.
T Consensus 197 -----L------~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G~~l~p~dA~l~lRGlkTL~--- 262 (396)
T COG0626 197 -----L------ELGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANTGAVLSPFDAWLLLRGLRTLA--- 262 (396)
T ss_pred -----h------hcCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHhhcCCCCCHHHHHHHHhccchHH---
Confidence 1 2355689999999987222 44566666777776654 2222233 467777777777776633
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhC-CC-eEecCC----------------ceEEEEeeccchhhccCchHHHHHHHHHHH
Q 011801 320 NFLVETSKRLAKRHHNFTKGLEQV-GI-NCLKSN----------------AGLFFWMDLRHLLKEKTLEGEIALWRTIVN 381 (477)
Q Consensus 320 ~~~~~~~~~l~~r~~~l~~~L~~~-gi-~~~~~~----------------~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~ 381 (477)
-+.++..++...+.+.|++. .+ +++-|. .|-.+.+++... +-..++++
T Consensus 263 ----~Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~----------~~~~~f~~ 328 (396)
T COG0626 263 ----LRMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNE----------EAAKKFLD 328 (396)
T ss_pred ----HHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCCh----------HHHHHHHH
Confidence 33445556667777888775 23 233221 333555677643 11233344
Q ss_pred hcCeE---EeCCCCCC----C-----------------CCCCEEEEEeccCCHHHHHHHHHHHHHHHhh
Q 011801 382 DVKLN---VSPGSSFQ----C-----------------TEPGWFRVCFANMDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 382 ~~gI~---v~pg~~f~----~-----------------~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~ 426 (477)
.-.+. .+-|.... + -.++.+|++++. |+.+.+++-|+++++.
T Consensus 329 ~L~l~~~a~SlGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVGl---Ed~eDLi~Dl~~Al~~ 394 (396)
T COG0626 329 SLKLFKLAESLGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSVGL---EDVEDLIADLEQALAK 394 (396)
T ss_pred hCCccEEeccCCCcccccccccccCcccCCHhHHHhcCCCCCeEEEEecC---CCHHHHHHHHHHHHHh
Confidence 33332 22222211 0 125689999995 5667777777777654
No 280
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.69 E-value=4.2e-14 Score=142.78 Aligned_cols=359 Identities=14% Similarity=0.097 Sum_probs=206.3
Q ss_pred CCCCCCCccccccccccc--cc--cHHHHHHHHHhCCCCcccccccccccc-cccccCCCCCcHHHHHHHHHHHhcccCC
Q 011801 31 FHPTQNPGGVIQLGLAEN--QL--CFDLIKDWITKNPYASICTAEGVEVFK-DIAIFQDYHGLPEFRQAVAKFMGKGRGG 105 (477)
Q Consensus 31 ~~~~~~~~~~i~l~~~~n--~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~aia~~~~~~~g~ 105 (477)
|..+-..+..|||..+.+ .+ +.|.+.+++++..+. +. ....|..+ +-..++|+.+......
T Consensus 49 ~l~DvdG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~----------~~h~~~~~~~~----e~~v~~ae~L~~~~p~ 114 (447)
T COG0160 49 YLYDVDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAK----------LNHTHTRDLYY----EPYVELAEKLTALAPG 114 (447)
T ss_pred EEEeCCCCEEEEcccCcchhccCCCCHHHHHHHHHHHHH----------hhcccCCcccc----hhHHHHHHHHHHhCCc
Confidence 344455667899977433 33 346666666663211 11 11122222 4444455544432110
Q ss_pred CCccCCCcEEEeCChHHHHHHHHHHh--cCCCCeEEEcCCCccchHHHHhhhC---------------CcEEEEEeccCC
Q 011801 106 RVTFDPDRIVMGGGATGANELIMFCL--ANPGDAFLVPSPYYAAFDRDLSWRT---------------GVQIVPVHCDIS 168 (477)
Q Consensus 106 ~~~~~~~~i~~t~G~t~al~~i~~~l--~~~Gd~vlv~~P~y~~~~~~~~~~~---------------g~~~~~v~~~~~ 168 (477)
-..+.+++++++++|++.+++.- ......|+...-.|++-....-..+ ++..+|+|....
T Consensus 115 ---~~~~~~~f~~sGaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr 191 (447)
T COG0160 115 ---SGLKKVFFGNSGAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYR 191 (447)
T ss_pred ---ccCCeEEecCCcHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCcccc
Confidence 13567999999999999998763 2334678888888876442221111 133333333222
Q ss_pred CCccc--------CHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccC-CCHHHHHHHHHHHHhcCeEEEecccccccccC
Q 011801 169 NNFKI--------TREALEAAYERAQEASINIKGLIITNPSNPLGTT-LDRDTLKSLVSFINDKNIHLVCDEIYAATVFS 239 (477)
Q Consensus 169 ~~f~i--------~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~-~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~ 239 (477)
+.|.. ..+.++..+........++.++|+.--..-.|.+ .|.+-++++.++|++||+++|+||+..++.-.
T Consensus 192 ~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRT 271 (447)
T COG0160 192 CPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRT 271 (447)
T ss_pred CcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcc
Confidence 22322 2333444444433334567777776556777865 56667999999999999999999999987555
Q ss_pred CCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHH-HhcccCCCchHHHHHHHHhcCC---h
Q 011801 240 SPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGR-KMSSFGLVSSQTQYLLASMLSD---D 315 (477)
Q Consensus 240 ~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~-~~~~~~~vs~~~q~~~~~~L~~---~ 315 (477)
+ .+..+.. .+..+| ++ ++||.+| .|+.+|.++..++ +..... ....++..++.+..++.+.|+- .
T Consensus 272 G-~~fa~E~----~gv~PD--iv--t~aK~ig-~G~Pl~avv~r~e-i~~~~~g~~~~Tf~GNpva~Aaa~AvL~vie~e 340 (447)
T COG0160 272 G-KMFAFEH----FGVEPD--IV--TLAKSLG-GGLPLSAVVGRAE-IMDWPPGGHGGTFGGNPVACAAALAVLDVIEEE 340 (447)
T ss_pred c-cchhhhh----cCCCCC--EE--Eeccccc-CCCceeEEeccHH-hcccCCcccCCCCCcCHHHHHHHHHHHHHHHHc
Confidence 5 3333222 122233 33 8899999 6999999999554 333221 2223334667776766666652 2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchhhc--cCchHHHHHHHHHHHhcCeEEeCCCCC
Q 011801 316 EFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKE--KTLEGEIALWRTIVNDVKLNVSPGSSF 393 (477)
Q Consensus 316 ~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~--~~~~~e~~l~~~ll~~~gI~v~pg~~f 393 (477)
++ .+...+.-++++++.+.+.+.....| .-..-|+++-+++...-.. .+.+.-..+...++ ++|+++..+..+
T Consensus 341 ~L-~~~a~~~G~~l~~~L~~l~~~~~~Ig---dVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~-~~Glil~~~G~~ 415 (447)
T COG0160 341 NL-LERAAELGEYLRDRLEELQEKHPLIG---DVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAF-ERGLLLLTCGPH 415 (447)
T ss_pred cH-HHHHHHHHHHHHHHHHHHHhhcCcee---cccccceEEEEEEecCCCCCCCCHHHHHHHHHHHH-HcCCEEeccCCC
Confidence 22 22233333344444333333332111 1123468888888643222 12122224455555 459988765433
Q ss_pred CCCCCCEEEEEeccC-CHHHHHHHHHHHHHHHhh
Q 011801 394 QCTEPGWFRVCFANM-DDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 394 ~~~~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~~ 426 (477)
.+.+||..... ++++++.++++|.+++++
T Consensus 416 ----~nviRi~PPL~is~e~~d~~l~il~~al~~ 445 (447)
T COG0160 416 ----GNVLRILPPLTISDEELDEGLDILEEALKE 445 (447)
T ss_pred ----CcEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 46899988764 999999999999999875
No 281
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.68 E-value=9.3e-15 Score=147.34 Aligned_cols=283 Identities=14% Similarity=0.165 Sum_probs=178.6
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCC-hHHHHHHHHHHhcC---CCCeEEEcCCCccchHHHHhhhCCcEEEEE
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGG-ATGANELIMFCLAN---PGDAFLVPSPYYAAFDRDLSWRTGVQIVPV 163 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G-~t~al~~i~~~l~~---~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v 163 (477)
+.+.|+.++++++- -++++|++|.| +|+++++++..|.. +||.|++ .|....+...++.. |+++..+
T Consensus 46 ~~~~r~~l~~l~~~-------~~~~~vvf~~gs~T~a~~~~~~~l~~~~~~~~~i~~-g~~~~~~~~~a~~~-g~~~~~~ 116 (355)
T cd00611 46 VNEAESDLRELLNI-------PDNYKVLFLQGGATGQFAAVPLNLLGDKGTADYVVT-GAWSAKAAKEAKRY-GGVVVIV 116 (355)
T ss_pred HHHHHHHHHHHhCC-------CCCceEEEEcCCchHHHHHHHHhcCCCCCeEEEEEC-CHHHHHHHHHHHhc-CCCcEEE
Confidence 46778888888861 14678999988 99999999999987 4554443 33322233355655 8888888
Q ss_pred eccCCCCcccC-HHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCC
Q 011801 164 HCDISNNFKIT-REALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPK 242 (477)
Q Consensus 164 ~~~~~~~f~i~-~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~ 242 (477)
+++..+++. + .+..+..+ +.++|+|.+++.+|.||..++ ++++.+|+++++|.+.+ ++..+
T Consensus 117 ~~~~~g~~~-~~~~~~~~~~------~~~~~lV~~~h~~t~tG~~~~--------~i~~~~g~~~~VDa~qs---~g~~~ 178 (355)
T cd00611 117 AAKEEGKYT-KIPDVETWDL------APDAAYVHYCSNETIHGVEFD--------EVPDTGGVPLVADMSSN---ILSRP 178 (355)
T ss_pred ecccccCCC-CCCCHhhcCC------CCCCCEEEEeCCcccccEEcc--------eecccCCCeEEEEcccc---ccCCC
Confidence 876433331 2 22222222 237899999999999999854 33445899999999997 44333
Q ss_pred cccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHH-------------HhcccCCCchHHHHHHH
Q 011801 243 FTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGR-------------KMSSFGLVSSQTQYLLA 309 (477)
Q Consensus 243 ~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~-------------~~~~~~~vs~~~q~~~~ 309 (477)
..+.+. + +.+.|..|.+|.+| +|+++.+++.+..... ....+++.+....+++.
T Consensus 179 -idv~~~--------~--~~~ss~~K~lGP~G--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~ 245 (355)
T cd00611 179 -IDVSKF--------G--VIYAGAQKNLGPAG--VTVVIVRKDLLGKARKITPSMLNYKTHADNNSLYNTPPTFAIYMMG 245 (355)
T ss_pred -CCHHHh--------C--EEEeecccccCCCc--eEEEEECHHHHhhcccCCCCcccHHHHHhcCCCCCCChHHHHHHHH
Confidence 343322 2 34566899999666 8888887665533111 00113444444555555
Q ss_pred HhcCChhhHHH--HHHHHHHHHHHHHHHHHHHHhhC-CCe-Ee-c--CCceEEEEeeccchhhccCchHHHHHHHHHHHh
Q 011801 310 SMLSDDEFVDN--FLVETSKRLAKRHHNFTKGLEQV-GIN-CL-K--SNAGLFFWMDLRHLLKEKTLEGEIALWRTIVND 382 (477)
Q Consensus 310 ~~L~~~~~~~~--~~~~~~~~l~~r~~~l~~~L~~~-gi~-~~-~--~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~ 382 (477)
+.|+ ++.+ -+++..++.++..+++.+.|+++ |+. .. . ...+..+.+.++.. .+. .++.. ++.+
T Consensus 246 aal~---~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~vvsf~~~~~----~l~--~~~~~-~~~r 315 (355)
T cd00611 246 LVLK---WLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNVPFRLGKE----ELE--KEFLK-EAEA 315 (355)
T ss_pred HHHH---HHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcCceEEEEEcCCh----hhh--HHHHH-HHHH
Confidence 5553 2222 25677788888999999999998 752 21 1 12334455665542 111 12223 3445
Q ss_pred cCeEEeCCCCCCCCCCCEEEEEeccC-CHHHHHHHHHHHHHHH
Q 011801 383 VKLNVSPGSSFQCTEPGWFRVCFANM-DDDTLQVALNRIAAFV 424 (477)
Q Consensus 383 ~gI~v~pg~~f~~~~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~ 424 (477)
.|+.+.+|.. ..+.||+|+... ++++++.+++.|+++.
T Consensus 316 ~G~~~~~~~~----~~g~vR~S~~~~nt~edi~~l~~al~~~~ 354 (355)
T cd00611 316 AGMIGLKGHR----SVGGIRASIYNALSLEGVQALADFMKEFQ 354 (355)
T ss_pred CCCcccCCCc----ccCeEEEEccCCCCHHHHHHHHHHHHHHh
Confidence 6997665543 247899999775 9999999999999864
No 282
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.68 E-value=3.9e-14 Score=146.21 Aligned_cols=344 Identities=15% Similarity=0.108 Sum_probs=191.9
Q ss_pred CCCCccccccccc--cccc--cHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCcc
Q 011801 34 TQNPGGVIQLGLA--ENQL--CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTF 109 (477)
Q Consensus 34 ~~~~~~~i~l~~~--~n~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~ 109 (477)
+.+.+..||+..+ .+.+ +.+.+.+.+++.-+. .... .+..+ ..+.+..+|+.+.+... -
T Consensus 38 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~----------~~~~-~~~~~--~~~~~~~la~~l~~~~p----~ 100 (423)
T PRK05964 38 LADGRELIDAISSWWVATHGHNHPYIDQAIREQLDR----------LDHV-IFAGF--THEPAERLAQRLVALTP----G 100 (423)
T ss_pred eCCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhh----------CCCc-ccccc--CCHHHHHHHHHHHHhCC----C
Confidence 4455678888544 4444 346666666553110 0000 11001 12445566666654321 1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhc------C-CC-CeEEEcCCCccchHHHHhhhCCc------------EEEEEeccCCC
Q 011801 110 DPDRIVMGGGATGANELIMFCLA------N-PG-DAFLVPSPYYAAFDRDLSWRTGV------------QIVPVHCDISN 169 (477)
Q Consensus 110 ~~~~i~~t~G~t~al~~i~~~l~------~-~G-d~vlv~~P~y~~~~~~~~~~~g~------------~~~~v~~~~~~ 169 (477)
..+++++++++++|++.+++... + +| .+|+...-+|++........++- .+..++....+
T Consensus 101 ~~~~v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d 180 (423)
T PRK05964 101 GLDHVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDG 180 (423)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcch
Confidence 23689999999999999887642 1 23 57888888888754322111111 11222222111
Q ss_pred CcccCHHHHHHHHHHHHHhCCCeeEEEEeC-CCCCcccCC-CHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHH
Q 011801 170 NFKITREALEAAYERAQEASINIKGLIITN-PSNPLGTTL-DRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVA 247 (477)
Q Consensus 170 ~f~i~~~~l~~~~~~~~~~~~~~k~vii~n-P~NPtG~~~-~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~ 247 (477)
....+++++++.+++ .+.++.+|++.. .+...|... +.+.+++|.++|++||+++|+||++.++...+..+..
T Consensus 181 ~~~~~~~~l~~~l~~---~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~-- 255 (423)
T PRK05964 181 YEQATLDALEALLEK---HAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFAC-- 255 (423)
T ss_pred hHHHHHHHHHHHHHh---CCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhHH--
Confidence 001126677776653 234677766643 366778655 8899999999999999999999999875443322111
Q ss_pred HhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHh---cc--c---CCCchHHHHHHHHhcC---Chh
Q 011801 248 EVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKM---SS--F---GLVSSQTQYLLASMLS---DDE 316 (477)
Q Consensus 248 ~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~---~~--~---~~vs~~~q~~~~~~L~---~~~ 316 (477)
+.. +..++ +.++||.++-+++++|++++++ .+.+.+... .. + ...++++..++.+.|+ ..+
T Consensus 256 ~~~---~v~pD----i~~~~K~l~gG~~p~~av~~~~-~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~~~ 327 (423)
T PRK05964 256 EQA---GVSPD----IMCLSKGLTGGYLPLAATLCTA-EIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFEDEP 327 (423)
T ss_pred Hhc---CCCCC----eeeeehhhhcCcccceEEEEcH-HHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHhcC
Confidence 111 11223 3378999983338999988854 444443211 01 1 1245566555555554 222
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEe--cCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCC
Q 011801 317 FVDNFLVETSKRLAKRHHNFTKGLEQV-GINCL--KSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSF 393 (477)
Q Consensus 317 ~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~--~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f 393 (477)
+ .+++.+.-+.+.+.|+++ ..... ....|+++.+.+..... . .....++..++ ++||.+.+..
T Consensus 328 ~--------~~~~~~~g~~l~~~l~~l~~~~~i~~vrg~Gl~~~i~l~~~~~--~-~~~~~l~~~l~-~~Gv~v~~~~-- 393 (423)
T PRK05964 328 V--------LERVAALSAGLAEGLEPFRDLPGVADVRVLGAIGAVELDRPVL--E-RDGPALRAFAL-ERGVLLRPLG-- 393 (423)
T ss_pred H--------HHHHHHHHHHHHHHHHhhccCCCeEEeecccEEEEEEeccCcc--h-hHHHHHHHHHH-HCCeEEEecC--
Confidence 2 223333334444444443 22211 12345676677753210 0 11224555555 5699998641
Q ss_pred CCCCCCEEEEEeccC-CHHHHHHHHHHHHHHHhh
Q 011801 394 QCTEPGWFRVCFANM-DDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 394 ~~~~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~~ 426 (477)
+.+|++.... ++++++++++++++++++
T Consensus 394 -----~~lR~~p~l~~t~edId~~v~~l~~al~~ 422 (423)
T PRK05964 394 -----NTIYLMPPYIITAEELDRITDAIVEVADE 422 (423)
T ss_pred -----CEEEEeCCcccCHHHHHHHHHHHHHHHhh
Confidence 3699998753 999999999999999865
No 283
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.67 E-value=8.8e-14 Score=144.03 Aligned_cols=358 Identities=12% Similarity=0.029 Sum_probs=195.3
Q ss_pred CCCCCCCccccccccc--cccc--cHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCC
Q 011801 31 FHPTQNPGGVIQLGLA--ENQL--CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGR 106 (477)
Q Consensus 31 ~~~~~~~~~~i~l~~~--~n~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~ 106 (477)
|..+.+.+..||+..+ .+.+ +.+.+.+.+++.-+ .........-..+.+.++|+.+.+....
T Consensus 32 ~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~-------------~~~~~~~~~~~~~~~~~lae~L~~~~p~- 97 (442)
T TIGR00709 32 WVTDVEGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQ-------------SGLPLHTLDLTTPLKDAFIEALLNIIPK- 97 (442)
T ss_pred EEEeCCCCEEEEccccHhhhcCCCCCHHHHHHHHHHHH-------------hccCccccccCcHHHHHHHHHHHHhCCC-
Confidence 3334556678888544 3333 34666666665311 1000000001135555666666543210
Q ss_pred CccCCCc-EEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCccchHHHHhhhCCc------------EEEEEeccCCCCc
Q 011801 107 VTFDPDR-IVMGGGATGANELIMFCLA--NPGDAFLVPSPYYAAFDRDLSWRTGV------------QIVPVHCDISNNF 171 (477)
Q Consensus 107 ~~~~~~~-i~~t~G~t~al~~i~~~l~--~~Gd~vlv~~P~y~~~~~~~~~~~g~------------~~~~v~~~~~~~f 171 (477)
.....+ +++++++++|++.+++... ....+|+...-+|++....+...+|. .+..++.. +.+
T Consensus 98 -~~~~~~~~f~~~sGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~--~~~ 174 (442)
T TIGR00709 98 -RKMDYKLQFPGPSGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYP--HEY 174 (442)
T ss_pred -cCCCccEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCC--ccc
Confidence 001124 4556899999999887632 22357888888898876443322221 11222221 111
Q ss_pred cc--------CHHHHHHHHHHHH----HhCCCeeEEEEeCCC-CCcccCCCHHHHHHHHHHHHhcCeEEEeccccccccc
Q 011801 172 KI--------TREALEAAYERAQ----EASINIKGLIITNPS-NPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVF 238 (477)
Q Consensus 172 ~i--------~~~~l~~~~~~~~----~~~~~~k~vii~nP~-NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~ 238 (477)
.. +.+.+.+.+++.. ....++.+|++.... |+.....+++.+++|.++|+++|+++|.||++.++..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGR 254 (442)
T TIGR00709 175 RCPFGIGGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGR 254 (442)
T ss_pred cccccCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCC
Confidence 11 1222222222211 112367777776544 4444568999999999999999999999999998655
Q ss_pred CCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHH-hcccCCCchHHHHHHHHhcCChhh
Q 011801 239 SSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRK-MSSFGLVSSQTQYLLASMLSDDEF 317 (477)
Q Consensus 239 ~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~-~~~~~~vs~~~q~~~~~~L~~~~~ 317 (477)
.+.. ...... +..+| ++ ++||.+| .|+++|+++++++ +...... ..+....+++++.++.+.|+.-+
T Consensus 255 tG~~-~a~~~~----gv~PD--iv--~~gK~l~-~G~Pigav~~~~~-~~~~~~~~~~~T~~gnpla~aaa~a~L~~i~- 322 (442)
T TIGR00709 255 SGTM-FAFEHA----GIEPD--FV--VMSKAVG-GGLPLAVLLIAPE-FDAWQPAGHTGTFRGNQLAMVTGTEALNYWK- 322 (442)
T ss_pred CCch-hHHHHc----CCCCc--EE--EEccccc-CCcccEEEEEchH-HhccCCCcCCCCCCcCHHHHHHHHHHHHHHH-
Confidence 5532 232221 11334 33 3799999 5999999999665 4322111 11112367788888777774311
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh----CCCeEecCCceEEEEeeccchhhc------c--CchHHHHHHHHHHHhcCe
Q 011801 318 VDNFLVETSKRLAKRHHNFTKGLEQ----VGINCLKSNAGLFFWMDLRHLLKE------K--TLEGEIALWRTIVNDVKL 385 (477)
Q Consensus 318 ~~~~~~~~~~~l~~r~~~l~~~L~~----~gi~~~~~~~g~~~~~~l~~~~~~------~--~~~~e~~l~~~ll~~~gI 385 (477)
+. ...++++++.++|.+.|++ .++...-..-|+++.+.+...... . .......+...++ ++||
T Consensus 323 -~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gv 397 (442)
T TIGR00709 323 -DD---NLAQNAQERGERITSFLDDMIKEHPCIGNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACF-ENGL 397 (442)
T ss_pred -hc---CHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHH-HCCe
Confidence 11 1122333444444444443 232222234567888877532110 0 0011123444444 5699
Q ss_pred EEeCCCCCCCCCCCEEEEEeccC-CHHHHHHHHHHHHHHHhh
Q 011801 386 NVSPGSSFQCTEPGWFRVCFANM-DDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 386 ~v~pg~~f~~~~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~~ 426 (477)
++.+... ..+.+|+..+.. ++++++++++++.+++.+
T Consensus 398 l~~~~~~----~~~~l~~~Ppl~it~~ei~~~~~~l~~~l~~ 435 (442)
T TIGR00709 398 LLETGGR----EGEVFRLLCPITIDQEECEEGISRFKQAVEE 435 (442)
T ss_pred EEeecCC----CCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 9976432 235799988764 999999999999999875
No 284
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.67 E-value=3.2e-14 Score=142.71 Aligned_cols=268 Identities=16% Similarity=0.121 Sum_probs=175.9
Q ss_pred CcEEEeCC-hHHHHHHHHHHhcCCCCeEEEcCCCccc--hHHHHhhhCCcEEEEEeccCCCCc--ccCHHHHHHHHHHHH
Q 011801 112 DRIVMGGG-ATGANELIMFCLANPGDAFLVPSPYYAA--FDRDLSWRTGVQIVPVHCDISNNF--KITREALEAAYERAQ 186 (477)
Q Consensus 112 ~~i~~t~G-~t~al~~i~~~l~~~Gd~vlv~~P~y~~--~~~~~~~~~g~~~~~v~~~~~~~f--~i~~~~l~~~~~~~~ 186 (477)
.+|+++.| +|+|++.++..+..+||++++..-...+ +...++.. |. +..+..+...+| .+++++++.
T Consensus 56 ~~v~~~~gsgT~a~ea~~~nl~~~~~~~l~i~~G~fg~r~~~~a~~~-g~-~~~~~~~~~~~~~~~~~~~~~~~------ 127 (349)
T TIGR01364 56 YEVLFLQGGATGQFAAVPLNLLAEGKVADYIVTGAWSKKAAKEAKKY-GV-VNVVASGKEGNYTKIPDPSTWEI------ 127 (349)
T ss_pred ceEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHh-CC-cEEEeccccCCCCCCCCHHhcCC------
Confidence 46878766 9999999999999999998877655433 33445555 88 666665422212 345554442
Q ss_pred HhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecC
Q 011801 187 EASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSL 266 (477)
Q Consensus 187 ~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~Sl 266 (477)
+.++++|.+++..|.||...+ ++++.+++++++|.+.+ +...+ ..+.+ .+ +++.|.
T Consensus 128 --~~~~~~v~~th~ETstGv~~~--------~l~~~~~~l~iVDavss---~g~~~-id~~~--------~d--~~~~ss 183 (349)
T TIGR01364 128 --SEDAAYVHYCANETIHGVEFR--------ELPDVKNAPLVADMSSN---ILSRP-IDVSK--------FG--LIYAGA 183 (349)
T ss_pred --CCCCCEEEEcCCCCcccEecc--------eecccCCCeEEEEcccc---ccCcc-CCHHH--------cc--EEEEec
Confidence 237899999999999999876 45556899999999997 44433 33332 13 778899
Q ss_pred CcccCCCCceEEEEEeCCHHHHHHHH-------------HhcccCCCchHHHHHHHHhcCChhhHHH-HHHHHHHHHHHH
Q 011801 267 SKDMGLPGFRVGIVYSFNDTVVNCGR-------------KMSSFGLVSSQTQYLLASMLSDDEFVDN-FLVETSKRLAKR 332 (477)
Q Consensus 267 SK~~g~~G~RvG~i~~~~~~i~~~~~-------------~~~~~~~vs~~~q~~~~~~L~~~~~~~~-~~~~~~~~l~~r 332 (477)
.|.+|.|| +|+++.+++.+..... ....+++.+...-+++.++|+--. +. -+++..++.++.
T Consensus 184 qK~lgP~G--lg~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~--~~gG~e~i~~r~~~l 259 (349)
T TIGR01364 184 QKNIGPAG--LTVVIVRKDLLGRASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLK--EQGGVKAIEKRNQAK 259 (349)
T ss_pred ccccCCCc--eEEEEECHHHHhhcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHH--HcCCHHHHHHHHHHH
Confidence 99999776 8888887765543211 011233445455555555553211 11 267778888889
Q ss_pred HHHHHHHHhhC-CCeEe-cC---CceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEecc
Q 011801 333 HHNFTKGLEQV-GINCL-KS---NAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFAN 407 (477)
Q Consensus 333 ~~~l~~~L~~~-gi~~~-~~---~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~ 407 (477)
.+++.+.|+++ |+... .. ..+..+.+.++.. .. ..++.. .+.+.|+.+.+|.. ..+.||+|+..
T Consensus 260 ~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~----~~--~~~~~~-~~~~~Gi~~~~~~~----~~g~vRvS~~~ 328 (349)
T TIGR01364 260 AQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNE----EL--EKRFLK-EAEERGLVSLKGHR----SVGGMRASIYN 328 (349)
T ss_pred HHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCCh----hH--hHHHHH-HHHHCCCcccCCcc----ccCeeEEECcC
Confidence 99999999998 55333 11 2223455555532 11 113334 44567997777644 24689999976
Q ss_pred C-CHHHHHHHHHHHHHHHhh
Q 011801 408 M-DDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 408 ~-~~e~l~~~l~~l~~~~~~ 426 (477)
. +.|+++.+++.|++++++
T Consensus 329 ~nt~edid~l~~al~~~~~~ 348 (349)
T TIGR01364 329 AMPLEGVQALVDFMKEFQKK 348 (349)
T ss_pred CCCHHHHHHHHHHHHHHHHh
Confidence 5 899999999999998765
No 285
>PRK06541 hypothetical protein; Provisional
Probab=99.67 E-value=4.6e-14 Score=146.51 Aligned_cols=353 Identities=12% Similarity=0.061 Sum_probs=192.8
Q ss_pred CCCCccccccccc--cccc--cHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCcc
Q 011801 34 TQNPGGVIQLGLA--ENQL--CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTF 109 (477)
Q Consensus 34 ~~~~~~~i~l~~~--~n~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~ 109 (477)
+.+.+..||+..+ .+.+ +.+.+.+.+++.-+ .+..+.......+....+|+.+.+... -
T Consensus 48 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~-------------~~~~~~~~~~~~~~~~~la~~l~~~~p----~ 110 (460)
T PRK06541 48 DDRGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAG-------------TLAFFPLWSYAHPPAIELAERLAALAP----G 110 (460)
T ss_pred eCCCCEEEECCccHHhccCCCCCHHHHHHHHHHHh-------------hCcCccccccCCHHHHHHHHHHHHhCC----C
Confidence 4445667887544 3344 34666666655311 111111111112444455555543321 1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhc------C-C-CCeEEEcCCCccchHHHHhhhCCcE------------EEEEeccCCC
Q 011801 110 DPDRIVMGGGATGANELIMFCLA------N-P-GDAFLVPSPYYAAFDRDLSWRTGVQ------------IVPVHCDISN 169 (477)
Q Consensus 110 ~~~~i~~t~G~t~al~~i~~~l~------~-~-Gd~vlv~~P~y~~~~~~~~~~~g~~------------~~~v~~~~~~ 169 (477)
+.+++++++++++|++.+++... + + ..+|+...-+|++....+...+|.. +..++....-
T Consensus 111 ~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~ 190 (460)
T PRK06541 111 DLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFY 190 (460)
T ss_pred CcCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccc
Confidence 23689999999999999887532 1 1 3678888888877653322111211 1222221100
Q ss_pred ---CcccC--------HHHHHHHHHHHHHhCCCeeEEEEeCC-CCCcccCCC-HHHHHHHHHHHHhcCeEEEeccccccc
Q 011801 170 ---NFKIT--------REALEAAYERAQEASINIKGLIITNP-SNPLGTTLD-RDTLKSLVSFINDKNIHLVCDEIYAAT 236 (477)
Q Consensus 170 ---~f~i~--------~~~l~~~~~~~~~~~~~~k~vii~nP-~NPtG~~~~-~~~l~~l~~~~~~~~~~lI~De~y~~~ 236 (477)
.|.-+ ++.+++.+++. ...++. .++..| .++.|.+.+ .+.+++|.++|+++|+++|+||++.++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~A-avi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGf 267 (460)
T PRK06541 191 RAPELGDDPEAFGRWAADRIEEAIEFE--GPDTVA-AVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAF 267 (460)
T ss_pred cccccCCCHHHHHHHHHHHHHHHHHhc--CCCCEE-EEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCC
Confidence 01112 24455555421 112444 455667 789998765 888999999999999999999999765
Q ss_pred ccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCc-eEEEEEeCCHHHHHHHHHhccc-----CCCchHHHHHHHH
Q 011801 237 VFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGF-RVGIVYSFNDTVVNCGRKMSSF-----GLVSSQTQYLLAS 310 (477)
Q Consensus 237 ~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~-RvG~i~~~~~~i~~~~~~~~~~-----~~vs~~~q~~~~~ 310 (477)
.-.+..+ . .+..+..+| ++ +|||.+| .|+ ++|+++++++...........+ ...++++..++.+
T Consensus 268 GR~G~~~-a----~~~~gv~PD--iv--t~gK~l~-~G~~pigav~~~~~i~~~~~~~~~~~~~~~T~~gnp~~~aaala 337 (460)
T PRK06541 268 GRLGEMF-G----CERFGYVPD--II--TCAKGIT-SGYSPLGAMIASDRLFEPFLDGPTMFLHGYTFGGHPVSAAVALA 337 (460)
T ss_pred CcCchhh-h----hhhcCCCCC--EE--Eeccccc-CCccceeEEEEcHHHHHHhhcCCCccccCCCCCCCHHHHHHHHH
Confidence 2222221 1 111122334 22 6899999 897 9999999665543332211111 1134444444444
Q ss_pred hcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC---CCeEecCCceEEEEeeccchhhc-cCch-----HH--HHHHHHH
Q 011801 311 MLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV---GINCLKSNAGLFFWMDLRHLLKE-KTLE-----GE--IALWRTI 379 (477)
Q Consensus 311 ~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~---gi~~~~~~~g~~~~~~l~~~~~~-~~~~-----~e--~~l~~~l 379 (477)
.|+-- ++ ....++++++.++|.+.|+++ ++......-|+++-+.+...... ..+. .. ..++..+
T Consensus 338 ~l~~l---~~--~~~~~~~~~~g~~l~~~L~~l~~~~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l 412 (460)
T PRK06541 338 NLDIF---ER--EGLLDHVRDNEPAFRATLEKLLDLPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPAL 412 (460)
T ss_pred HHHHH---Hh--ccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccccCCcchhhhhhHHHHHHHHH
Confidence 44321 10 123345566666677777654 22111223456777776431110 0010 00 1344555
Q ss_pred HHhcCeEEeCCCCCCCCCCCEEEEEeccC-CHHHHHHHHHHHHHHHhh
Q 011801 380 VNDVKLNVSPGSSFQCTEPGWFRVCFANM-DDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 380 l~~~gI~v~pg~~f~~~~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~~ 426 (477)
+ +.||.+.+.. .+...+|++.... +++++++++++|.+++++
T Consensus 413 ~-~~Gi~~~~~~----~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~ 455 (460)
T PRK06541 413 F-EAGLYCRADD----RGDPVVQLAPPLISGQEEFDEIEQILRSVLTE 455 (460)
T ss_pred H-hCCeEEEecC----CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 5 5699998731 1246799999754 999999999999999865
No 286
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.67 E-value=4.2e-14 Score=143.08 Aligned_cols=172 Identities=23% Similarity=0.347 Sum_probs=127.8
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCCccchHHHHhhhCCcEEEEEecc
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCL-ANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCD 166 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l-~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~ 166 (477)
..+|++++++|++ ..+++.++++|.|+.+++.++ .++||.|++|.-+|+.....+.+. |++++.++++
T Consensus 27 ~~~fE~~~a~~~g----------~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~~~~~ai~~~-G~~pv~~Di~ 95 (363)
T PF01041_consen 27 VEEFEKEFAEYFG----------VKYAVAVSSGTSALHLALRALGLGPGDEVIVPAYTFPATASAILWA-GAEPVFVDID 95 (363)
T ss_dssp HHHHHHHHHHHHT----------SSEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-THHHHHHHHT-T-EEEEE-BE
T ss_pred HHHHHHHHHHHhC----------CCeEEEeCChhHHHHHHHHhcCCCcCceEecCCCcchHHHHHHHHh-ccEEEEEecc
Confidence 6899999999997 468999999999999999998 478999999999999999998887 9999999998
Q ss_pred CCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccc-cCCCCccc
Q 011801 167 ISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATV-FSSPKFTS 245 (477)
Q Consensus 167 ~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~-~~~~~~~s 245 (477)
+ ++|.+|++++++++.+ ++|+|+++ +.-|...+ +.+|.++|+++|+.||+|.+.+-.. +.+. .
T Consensus 96 ~-~~~~id~~~~~~~i~~------~t~ai~~~---h~~G~~~d---~~~i~~~~~~~~i~lIeD~a~a~g~~~~g~---~ 159 (363)
T PF01041_consen 96 P-ETLNIDPEALEKAITP------KTKAILVV---HLFGNPAD---MDAIRAIARKHGIPLIEDAAQAFGARYKGR---P 159 (363)
T ss_dssp T-TTSSB-HHHHHHHHHT------TEEEEEEE----GGGB------HHHHHHHHHHTT-EEEEE-TTTTT-EETTE---E
T ss_pred C-CcCCcCHHHHHHHhcc------CccEEEEe---cCCCCccc---HHHHHHHHHHcCCcEEEccccccCceeCCE---e
Confidence 5 5799999999999976 88999987 55777776 8888999999999999999998311 1111 1
Q ss_pred HHHhhhhccCCCCcEEEEecC--CcccCCCCceEEEEEeCCHHHHHHHHHhccc
Q 011801 246 VAEVIQEMDCNRDLIHIIYSL--SKDMGLPGFRVGIVYSFNDTVVNCGRKMSSF 297 (477)
Q Consensus 246 ~~~~~~~~~~~~~~viiv~Sl--SK~~g~~G~RvG~i~~~~~~i~~~~~~~~~~ 297 (477)
+. ..+ .+.+.|| +|.+. ..--|+|+++++.+.+.++.++..
T Consensus 160 ----~G----~~g-d~~~fSf~~~K~i~--~geGG~v~~~~~~~~~~~~~~~~~ 202 (363)
T PF01041_consen 160 ----VG----SFG-DIAIFSFHPTKIIT--TGEGGAVVTNDPELAERARALRNH 202 (363)
T ss_dssp ----TT----SSS-SEEEEESSTTSSS---SSS-EEEEESTHHHHHHHHHHTBT
T ss_pred ----cc----CCC-CceEecCCCCCCCc--CCCCeeEEecHHHHHHHhhhhhcc
Confidence 11 112 3556677 68884 334599999888888777765443
No 287
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.66 E-value=1.1e-13 Score=138.26 Aligned_cols=361 Identities=17% Similarity=0.205 Sum_probs=230.6
Q ss_pred hhcCCCCCCCCCCcccccccccccc-ccHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhccc
Q 011801 25 AFDRNPFHPTQNPGGVIQLGLAENQ-LCFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGR 103 (477)
Q Consensus 25 ~~~~~~~~~~~~~~~~i~l~~~~n~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~ 103 (477)
+-.-|+|.-.. .+=+|||-++.-. .+.+...+++..- ...|........|.+.+++.++
T Consensus 29 ~agyN~f~l~s-~dV~IDLrSDTgT~apS~~m~aAM~~G----------------DD~Y~gdpSv~~Lee~vael~G--- 88 (467)
T TIGR02617 29 KAGMNPFLLDS-EDVFIDLLTDSGTGAVTQSMQAAMMRG----------------DEAYSGSRSYYALAESVKNIFG--- 88 (467)
T ss_pred HcCCCcccCCC-CCeEEECccCCCCCCCCHHHHHHHHcC----------------CcccccCchHHHHHHHHHHHhC---
Confidence 33445665533 3335899877665 3666666655441 2357777778999999999997
Q ss_pred CCCCccCCCcEEEeCChHHHHHHHHHHhcC-CCCeEEEcCC-------Cccc-hHHHHhhhCCcEEEEEecc--------
Q 011801 104 GGRVTFDPDRIVMGGGATGANELIMFCLAN-PGDAFLVPSP-------YYAA-FDRDLSWRTGVQIVPVHCD-------- 166 (477)
Q Consensus 104 g~~~~~~~~~i~~t~G~t~al~~i~~~l~~-~Gd~vlv~~P-------~y~~-~~~~~~~~~g~~~~~v~~~-------- 166 (477)
.+.++.|..++++..+++..+++ |||.+++..+ ++.. ....+... |+.+..++.+
T Consensus 89 -------~E~alpthqGRgaE~Il~~~~~~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~-G~~~~~l~~~ea~~~~~~ 160 (467)
T TIGR02617 89 -------YQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQIN-GCTARNVYTKEAFDTGVR 160 (467)
T ss_pred -------CceEEECCCCchHHHHHHHhhcccccccccccccccccceEEEEecchHHHHHc-CceeecccchhhcccccC
Confidence 35688888889999999999988 7887775543 2221 12234444 8888776432
Q ss_pred CCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCC-CcccCCCHHHHHHHHHHHHhcCeEEEeccccccc--cc-----
Q 011801 167 ISNNFKITREALEAAYERAQEASINIKGLIITNPSN-PLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAAT--VF----- 238 (477)
Q Consensus 167 ~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~N-PtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~--~~----- 238 (477)
......+|+++|++++++.... ++..+..+--+| --|+.+|.+.++++.++|++||+.++.|.+...- +|
T Consensus 161 ~~fkG~~dl~~le~~I~~~g~~--~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE 238 (467)
T TIGR02617 161 YDFKGNFDLEGLERGIEEVGPN--NVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQRE 238 (467)
T ss_pred CCCCCCcCHHHHHHHHhhcCCC--CceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcc
Confidence 1112468999999999853111 232222211123 3589999999999999999999999999876310 11
Q ss_pred CCCCcccHHHhhhhccCCCCcEEEEecCCcccCCC-CceEEEEEeCCH---HHHHHHHH-------hcccCCCchHHHHH
Q 011801 239 SSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLP-GFRVGIVYSFND---TVVNCGRK-------MSSFGLVSSQTQYL 307 (477)
Q Consensus 239 ~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~-G~RvG~i~~~~~---~i~~~~~~-------~~~~~~vs~~~q~~ 307 (477)
....-.++.++..+.--..| .+.-|+||.+|.| | |+++++++ .+....+. +.+|+..+.-...+
T Consensus 239 ~~a~~~si~eI~rE~~~~aD--svt~slsKglgApvG---g~Lag~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea 313 (467)
T TIGR02617 239 AEYKNWSIEQITRETYKYAD--MLAMSAKKDAMVPMG---GLLCFKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMER 313 (467)
T ss_pred hhhcCCCHHHHHHHhhccCC--EEEEEcCCCCCCccc---ceEEecchhHHHHHHHHHhhcccccCCcCcCchhHHHHHH
Confidence 01122666666533210223 4556999999887 5 67777777 33333322 24566677666666
Q ss_pred HHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchh---hccCchHHHHHHHHHHHhcC
Q 011801 308 LASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLL---KEKTLEGEIALWRTIVNDVK 384 (477)
Q Consensus 308 ~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~---~~~~~~~e~~l~~~ll~~~g 384 (477)
++.-|.+. ..+.++..+ +.+ .++|.+.|.+.|+++.. .||.-++++....+ ....|.. ..|...|..+.|
T Consensus 314 ~a~Gl~e~-~~~~yl~~r---i~q-v~yl~~~L~~~Gvpi~~-~Gghav~iDa~~~lphip~~~fpa-~al~~~ly~~~G 386 (467)
T TIGR02617 314 LAVGLYDG-MNLDWLAYR---INQ-VQYLVNGLEEIGVVCQQ-AGGHAAFVDAGKLLPHIPADQFPA-HALACELYKVAG 386 (467)
T ss_pred HHhhhhhc-ccHHHHHHH---HHH-HHHHHHHHHhCCCcEEe-cCccEEEEehhhhCCCCChhhCcH-HHHHHHHHHHcC
Confidence 66556543 113444433 332 37889999999999888 78888888765532 2222322 357777888889
Q ss_pred eEEeC-CCCCCCC--------C--CCEEEEEecc--CCHHHHHHHHHHHHHHHhhh
Q 011801 385 LNVSP-GSSFQCT--------E--PGWFRVCFAN--MDDDTLQVALNRIAAFVQQD 427 (477)
Q Consensus 385 I~v~p-g~~f~~~--------~--~~~~Rl~~~~--~~~e~l~~~l~~l~~~~~~~ 427 (477)
|.-.- |+..... . -..+|+++.. .|.++++...++|..+.++.
T Consensus 387 iR~~e~G~~~~~rd~~~~~~~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~~ 442 (467)
T TIGR02617 387 IRAVEIGSLLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENA 442 (467)
T ss_pred cceEeecceecccCCCCCccCCCccceeeeccccccccHhHHHHHHHHHHHHHhhh
Confidence 97333 3331110 1 1479999966 39999999999999999873
No 288
>PLN03032 serine decarboxylase; Provisional
Probab=99.66 E-value=7.5e-14 Score=140.28 Aligned_cols=286 Identities=12% Similarity=0.095 Sum_probs=187.7
Q ss_pred CcHHHHHHHHHHHhcccCCCCccCCCcE--EEeCChHHHHHHHHHHhc--CCCCeEEEcCCCccchHHHHhhhCCcEEEE
Q 011801 87 GLPEFRQAVAKFMGKGRGGRVTFDPDRI--VMGGGATGANELIMFCLA--NPGDAFLVPSPYYAAFDRDLSWRTGVQIVP 162 (477)
Q Consensus 87 G~~~lr~aia~~~~~~~g~~~~~~~~~i--~~t~G~t~al~~i~~~l~--~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~ 162 (477)
...++.+.+.+++.+..| .+++++ ++|+|+|+++..++.+.. .++..|+++.-.+..+...++.. |.++..
T Consensus 63 ~a~~~e~~v~~~ia~llg----~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv~kaa~~l-g~~~~~ 137 (374)
T PLN03032 63 HSRQFEVGVLDWFARLWE----LEKDEYWGYITTCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMY-RMEAVK 137 (374)
T ss_pred cHHHHHHHHHHHHHHHhC----CCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHHHHHHHHc-CCCCeE
Confidence 346777777777777665 567776 999999999998887643 34567888888888888888877 888888
Q ss_pred EeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcC-----eEEEecccccccc
Q 011801 163 VHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKN-----IHLVCDEIYAATV 237 (477)
Q Consensus 163 v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~-----~~lI~De~y~~~~ 237 (477)
||++. ++.+|+++|++++++. ..++.+|+++..+|+||.+-+ +++|.++|+++| +++++|.+|++..
T Consensus 138 V~~d~--~g~id~~~L~~~i~~~---~~~~~lvv~tagtt~tG~idp---i~eI~~i~~~~g~~~~~~~lHvDaA~gg~~ 209 (374)
T PLN03032 138 VPTLP--SGEIDYDDLERALAKN---RDKPAILNVNIGTTVKGAVDD---LDRILRILKELGYTEDRFYIHCDGALFGLM 209 (374)
T ss_pred eeeCC--CCcCcHHHHHHHHHHc---CCCCEEEEEEecCcCCccCCC---HHHHHHHHHHhCCCCCCeeEEEEccchhhh
Confidence 88864 5589999999999752 225667888889999999988 778888888886 5999999998642
Q ss_pred c--CCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhcccC-------CCc-----hH
Q 011801 238 F--SSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSFG-------LVS-----SQ 303 (477)
Q Consensus 238 ~--~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~~~~-------~vs-----~~ 303 (477)
. ... .+...+ ......+.-|.+|.+| ....+|.++..++.+.. +.....|. ..| .+
T Consensus 210 ~p~~~~--~~~~~~------~~~vDSis~s~HK~~g-~P~g~G~ll~r~~~~~~-~~~~~~Yl~~~d~ti~gSR~g~~~l 279 (374)
T PLN03032 210 MPFVSR--APEVTF------RKPIGSVSVSGHKFLG-CPMPCGVALTRKKHVKA-LSQNVEYLNSRDATIMGSRNGHAPL 279 (374)
T ss_pred hhccCC--CcccCC------CcCCcEEEECcccccC-CCcCeEEEEEEchhhHh-hccCCcccCCCCCcccCCCchHHHH
Confidence 1 111 000011 1123345679999887 55679999997654432 21111111 011 22
Q ss_pred HHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhc
Q 011801 304 TQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDV 383 (477)
Q Consensus 304 ~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~ 383 (477)
..++....+.... +.+..++..+..+++.+.|++.++++....-.+.+.++-+. .+ .+. .
T Consensus 280 ~~w~~l~~~G~~g-----~~~~~~~~~~~a~~l~~~l~~~~~~~~~~p~~~~V~f~~~~--------~~-----~~~--~ 339 (374)
T PLN03032 280 YLWYTLRRKGYRG-----IKRDVQHCMRNAHYLKDRLTEAGLTCRLNELSSTVVFERPM--------DE-----AFI--K 339 (374)
T ss_pred HHHHHHHHhCHHH-----HHHHHHHHHHHHHHHHHHHHhCCCcEEECCCceEEEEcCCC--------cH-----hHh--h
Confidence 3333333333322 35566677778888999999888876543333455554441 01 122 2
Q ss_pred CeEEeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHH
Q 011801 384 KLNVSPGSSFQCTEPGWFRVCFAN-MDDDTLQVALNRIAA 422 (477)
Q Consensus 384 gI~v~pg~~f~~~~~~~~Rl~~~~-~~~e~l~~~l~~l~~ 422 (477)
|..+.+- .+++|+++.. .+.+.++++++.|++
T Consensus 340 ~w~l~~~-------~~~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 340 KWQLACE-------GDIAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred eeeeccc-------CCEEEEEECCCCCHHHHHHHHHHHhc
Confidence 5555421 3479999965 477888888887764
No 289
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.65 E-value=2.2e-13 Score=140.86 Aligned_cols=309 Identities=13% Similarity=0.092 Sum_probs=174.1
Q ss_pred HHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHh--cCCCCeEEEcCCCccchHHHHhhhCCc---------
Q 011801 90 EFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCL--ANPGDAFLVPSPYYAAFDRDLSWRTGV--------- 158 (477)
Q Consensus 90 ~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l--~~~Gd~vlv~~P~y~~~~~~~~~~~g~--------- 158 (477)
+....+|+.+.+..+. -..+++++++++++|++.+++.- .....+|+...-+|++....+-..+|.
T Consensus 97 ~~~~~lAe~L~~~~p~---~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~ 173 (441)
T PRK05769 97 EPAVELAERLVEIAPG---GFEKKVFFTNSGTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFF 173 (441)
T ss_pred HHHHHHHHHHHHhCCC---CCCCEEEECCchHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCC
Confidence 4455666666543210 01368999999999999988753 122367888888888765332211111
Q ss_pred ----EEEEEeccCC--CCcc-cC--------HHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccC-CCHHHHHHHHHHHHh
Q 011801 159 ----QIVPVHCDIS--NNFK-IT--------REALEAAYERAQEASINIKGLIITNPSNPLGTT-LDRDTLKSLVSFIND 222 (477)
Q Consensus 159 ----~~~~v~~~~~--~~f~-i~--------~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~-~~~~~l~~l~~~~~~ 222 (477)
.+..++.... ..|. -+ .+.+++.+.+......++.+|++.--..-.|.. .+.+.+++|.++|++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~ 253 (441)
T PRK05769 174 PLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADK 253 (441)
T ss_pred CCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHH
Confidence 1222332110 0011 01 122333221110113367766655334556764 467789999999999
Q ss_pred cCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHh--cccCCC
Q 011801 223 KNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKM--SSFGLV 300 (477)
Q Consensus 223 ~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~--~~~~~v 300 (477)
+|+++|+||++.++...+..+ ..... +..+| ++ +|||.+| .|+++|+++++++. ....... ..|+ .
T Consensus 254 ~g~lli~DEv~tG~gr~G~~~-a~~~~----gv~pD--iv--t~~K~l~-~G~p~gav~~~~~i-~~~~~~~~~~T~~-g 321 (441)
T PRK05769 254 YGILLIDDEVQTGMGRTGKMF-AIEHF----GVEPD--II--TLAKAIA-GGLPLGAVIGRAEL-MFLPPGSHANTFG-G 321 (441)
T ss_pred cCCEEEEechhhCCCccccee-hhhcc----CCCCC--EE--EEccccc-CCcccEEEEEehhh-hhcCCCCCCCCCC-c
Confidence 999999999998754444322 11111 11333 22 6899999 89999999986554 3332211 2232 4
Q ss_pred chHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC----CCeEecCCceEEEEeeccchhhccCchHHHHHH
Q 011801 301 SSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV----GINCLKSNAGLFFWMDLRHLLKEKTLEGEIALW 376 (477)
Q Consensus 301 s~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~----gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~ 376 (477)
+++++.++.+.|+-- ++ ...++++++-++|.+.|+++ ++......-|+++-+.+..............++
T Consensus 322 ~p~~~aaa~a~L~~l---~~---~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~~~ 395 (441)
T PRK05769 322 NPVAAAAALATLEEL---EE---GLLENAQKLGEYLRKELKELKEKYEFIGDVRGLGLMIGVELVKDRKEPDPKLRDKVL 395 (441)
T ss_pred CHHHHHHHHHHHHHH---HH---HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecceEEEEEEeccCCccccHHHHHHHH
Confidence 666776666666432 21 23344455555566656543 332222334677777774321111111112345
Q ss_pred HHHHHhcCeEEeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHhh
Q 011801 377 RTIVNDVKLNVSPGSSFQCTEPGWFRVCFAN-MDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 377 ~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~-~~~e~l~~~l~~l~~~~~~ 426 (477)
+.++ +.||.+.+. +...+|++... +++++++++++++.+++.+
T Consensus 396 ~~~~-~~Gil~~~~------~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 439 (441)
T PRK05769 396 YEAF-KRGLLLLGA------GKSAIRIIPPLIITEEEADIGLEILEEAIKE 439 (441)
T ss_pred HHHH-hCCcEEecC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 5555 469998753 23579999875 4999999999999999864
No 290
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.65 E-value=5.3e-14 Score=143.04 Aligned_cols=288 Identities=13% Similarity=0.069 Sum_probs=179.2
Q ss_pred cHHHHHHHHHHHhcccCCCCcc-CCCcEEEeC-ChHHHHHHHHHHhcCC-CCeEEEcCCCccchHH-HH-hhhCCc-EEE
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTF-DPDRIVMGG-GATGANELIMFCLANP-GDAFLVPSPYYAAFDR-DL-SWRTGV-QIV 161 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~-~~~~i~~t~-G~t~al~~i~~~l~~~-Gd~vlv~~P~y~~~~~-~~-~~~~g~-~~~ 161 (477)
+.+.|+.++++++ . ++++|+++. ++|++++.++..|.++ ++.|++ .-.|+.-.. .+ +.. |. ++.
T Consensus 50 ~~~~r~~l~~l~~--------~~~~~~v~~~~gs~T~~~~~~~~~l~~~~~~~vi~-~g~f~~~~~~~~~~~~-g~~~v~ 119 (378)
T PRK03080 50 LKRVIEGTRELLS--------LPEGYEVGIVPGSDTGAWEMALWSLLGARRVDHLA-WESFGSKWATDVVKQL-KLEDPR 119 (378)
T ss_pred HHHHHHHHHHHhC--------CCCCceEEEECCchHHHHHHHHHhcCCCCcceEEE-eCHHHHHHHHHHHhhc-CCCCce
Confidence 4677778888876 3 345788875 8999999999998875 444444 434544222 12 334 88 877
Q ss_pred EEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCC
Q 011801 162 PVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSP 241 (477)
Q Consensus 162 ~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~ 241 (477)
.++.+. +..+|+++++ .++.|.+++.+|.||..++ +++|++ +++|+++|+|.+.+ ++..
T Consensus 120 ~~~~~~--g~~~d~~~i~-----------~~~~V~~~h~~t~tG~~~p---i~~I~~--~~~g~~~vVDa~qs---~G~~ 178 (378)
T PRK03080 120 VLEADY--GSLPDLSAVD-----------FDRDVVFTWNGTTTGVRVP---VARWIG--ADREGLTICDATSA---AFAL 178 (378)
T ss_pred EeccCC--CCCCCHhhcC-----------CCCCEEEEecCCccceecc---chhhcc--ccCCCeEEEecccc---cccC
Confidence 777653 3356666532 2456889999999999999 666666 78899999999987 4443
Q ss_pred CcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHh----------------------c--cc
Q 011801 242 KFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKM----------------------S--SF 297 (477)
Q Consensus 242 ~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~----------------------~--~~ 297 (477)
+ ..+.+ ..+++.|..|.++. ...+|+++.+++.+....... . .+
T Consensus 179 p-idv~~----------iD~~~~s~~K~l~~-P~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 246 (378)
T PRK03080 179 P-LDWSK----------LDVYTFSWQKVLGG-EGGHGMAILSPRAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTI 246 (378)
T ss_pred C-CCHHH----------CcEEEEehhhhCCC-CCceEEEEECHHHHHhhhcccCCCCCchhheeccchHHhhhhhcCCcc
Confidence 3 33332 23778899999863 234899999766554321110 0 00
Q ss_pred CCCchHHHHHHHHhcCChhhHHH--HHHHHHHHHHHHHHHHHHHHhhCC-CeEecC----CceEEEEeeccchhhccCch
Q 011801 298 GLVSSQTQYLLASMLSDDEFVDN--FLVETSKRLAKRHHNFTKGLEQVG-INCLKS----NAGLFFWMDLRHLLKEKTLE 370 (477)
Q Consensus 298 ~~vs~~~q~~~~~~L~~~~~~~~--~~~~~~~~l~~r~~~l~~~L~~~g-i~~~~~----~~g~~~~~~l~~~~~~~~~~ 370 (477)
++.+...-.++.+.|+ ++.+ -+++..++.++..+++.+.|++.+ +..... .++..+.+.+++. + ....
T Consensus 247 ~tp~i~~i~~l~~al~---~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~-~-~~~~ 321 (378)
T PRK03080 247 NTPSMLTVEDYLDQLD---WANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVDA-Q-AAVD 321 (378)
T ss_pred cCchHHHHHHHHHHHH---HHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEEEEcCCc-h-HHHH
Confidence 1112122222222222 2122 245666777788888888888885 454421 1223445556540 0 0011
Q ss_pred HHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccC-CHHHHHHHHHHHHHHHhhhh
Q 011801 371 GEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANM-DDDTLQVALNRIAAFVQQDK 428 (477)
Q Consensus 371 ~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~~~~ 428 (477)
.++...++++ |+.++.|... ..++.+|+|+... ++++++.+++.|++++++.+
T Consensus 322 --~~~~~~l~~~-~i~v~~g~~~--~~~~~vRis~~~~~t~~di~~l~~al~~~~~~~~ 375 (378)
T PRK03080 322 --AAAVAKLLRE-NGAVDIEPYR--DAPNGLRIWCGPTVEPADVEALTPWLDWAFERLK 375 (378)
T ss_pred --HHHHHHHHHc-CCeecccccc--CCCCcEEEecCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 1355566655 8888876432 2357899999765 89999999999999887644
No 291
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.65 E-value=4.5e-13 Score=138.70 Aligned_cols=291 Identities=14% Similarity=0.123 Sum_probs=164.9
Q ss_pred CcEEEeCChHHHHHHHHHHhc-CCC-CeEEEcCCCccchHHHHhhhCCc-------------EEEEEeccCC--CCcc-c
Q 011801 112 DRIVMGGGATGANELIMFCLA-NPG-DAFLVPSPYYAAFDRDLSWRTGV-------------QIVPVHCDIS--NNFK-I 173 (477)
Q Consensus 112 ~~i~~t~G~t~al~~i~~~l~-~~G-d~vlv~~P~y~~~~~~~~~~~g~-------------~~~~v~~~~~--~~f~-i 173 (477)
++|++++++++|++.+++.-. -.| ..|+...-+|++.....-..++. .++.++.... ..+. .
T Consensus 104 ~~v~f~~SGseA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 183 (445)
T PRK08593 104 KRVTFGLSGSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEP 183 (445)
T ss_pred CEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCC
Confidence 589999999999999987531 123 56888888887764322111121 1222332110 0011 0
Q ss_pred CH-------HHHHHHHHHHHHhCCCeeEEEEeCCCCCcccC-CCHHHHHHHHHHHHhcCeEEEecccccccccCCCCccc
Q 011801 174 TR-------EALEAAYERAQEASINIKGLIITNPSNPLGTT-LDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTS 245 (477)
Q Consensus 174 ~~-------~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~-~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s 245 (477)
+. +++++.+++.. ...++.+|++.......|.+ .+.+.+++|.++|+++|+++|+||++.++...+..+ .
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~-~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~-a 261 (445)
T PRK08593 184 DANFVEEYLAPLKEMFEKYL-PADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWS-S 261 (445)
T ss_pred cHHHHHHHHHHHHHHHHhhc-CCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHH-H
Confidence 11 22333332110 12367777776556677876 688889999999999999999999998753333211 1
Q ss_pred HHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHh---cccCCCchHHHHHHHHhcCChhhHHHHH
Q 011801 246 VAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKM---SSFGLVSSQTQYLLASMLSDDEFVDNFL 322 (477)
Q Consensus 246 ~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~---~~~~~vs~~~q~~~~~~L~~~~~~~~~~ 322 (477)
.+. .+..+| +-+++|.+| .|+++|+++++++ +.+.+... .+++ .++++..++.+.|+--+ ++
T Consensus 262 -~~~---~gv~pD----i~t~gK~l~-~G~p~gav~~~~~-i~~~~~~~~~~~T~~-~~pl~~aaa~a~l~~l~--~~-- 326 (445)
T PRK08593 262 -ISH---FNITPD----LMSFGKSLA-GGMPMSAIVGRKE-IMESLEAPAHLFTTG-ANPVSCAAALATIDMIE--DE-- 326 (445)
T ss_pred -HHh---cCCCCC----Eeeeccccc-CCcccEEEEEcHH-HHhhhccCCCCCCCC-CCHHHHHHHHHHHHHHH--hc--
Confidence 111 111333 338899998 8899999999654 44433211 1222 45666665555554211 11
Q ss_pred HHHHHHHHHHHHHHHHHHhh----CCCeEecCCceEEEEeeccchh--hccCchHHHHHHHHHHHhcCeEEeCCCCCCCC
Q 011801 323 VETSKRLAKRHHNFTKGLEQ----VGINCLKSNAGLFFWMDLRHLL--KEKTLEGEIALWRTIVNDVKLNVSPGSSFQCT 396 (477)
Q Consensus 323 ~~~~~~l~~r~~~l~~~L~~----~gi~~~~~~~g~~~~~~l~~~~--~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~ 396 (477)
+..+++++.-+++.+.|++ .++...-..-|+++.+.+.... ..........++..+++ +||.+.+.
T Consensus 327 -~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~~-~Gv~~~~~------ 398 (445)
T PRK08593 327 -SLLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGLSIGIDIVSDKKLKTRDNEAALKICNYCFE-HGVVIIAV------ 398 (445)
T ss_pred -cHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeccceEEEEEEecCCCcCCCcHHHHHHHHHHHHH-CCeEEecc------
Confidence 1122333333444444433 3332222345667767664211 11111112345556554 69998653
Q ss_pred CCCEEEEEeccC-CHHHHHHHHHHHHHHHhhh
Q 011801 397 EPGWFRVCFANM-DDDTLQVALNRIAAFVQQD 427 (477)
Q Consensus 397 ~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~~~ 427 (477)
....+|++.+.. ++++++.+++++.+++++.
T Consensus 399 ~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 430 (445)
T PRK08593 399 AGNVLRFQPPLVITYEQLDTALNTIEQAFTAL 430 (445)
T ss_pred CCCEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 135799988764 9999999999999999764
No 292
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.65 E-value=1.7e-14 Score=139.72 Aligned_cols=349 Identities=15% Similarity=0.126 Sum_probs=217.4
Q ss_pred ccccccccccccHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCC
Q 011801 40 VIQLGLAENQLCFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGG 119 (477)
Q Consensus 40 ~i~l~~~~n~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G 119 (477)
.|.|=..||-.++...+..-.... ..-.||.. .-..|+...-..++.+...+...+.+| .+-.+|-..+|
T Consensus 28 ~ieLIASEN~~S~aV~~A~gS~lt---nKYAEGyP---gkRyYgGce~VD~vE~laierak~LFg----a~~anVQPhSG 97 (413)
T COG0112 28 HIELIASENFTSPAVMEAQGSDLT---NKYAEGYP---GKRYYGGCEYVDEVEELAIERAKKLFG----AEYANVQPHSG 97 (413)
T ss_pred ceeeeeccccCCHHHHHHHhhhhh---hccccCCC---CccccCCCeeHHHHHHHHHHHHHHHhC----CCccccCCCCc
Confidence 467767777666543332111100 00023311 122344444455666666666776666 45567777777
Q ss_pred hHHHHHHHHHHhcCCCCeEEEcCCCccchHHHH-hh-hCC--cEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEE
Q 011801 120 ATGANELIMFCLANPGDAFLVPSPYYAAFDRDL-SW-RTG--VQIVPVHCDISNNFKITREALEAAYERAQEASINIKGL 195 (477)
Q Consensus 120 ~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~-~~-~~g--~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~v 195 (477)
+ +|+..++.+|++|||+|+-.+-.+.++..-- .. ..| .+.++++++. ++..+|.|++++..++. ++|+|
T Consensus 98 s-~AN~av~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~-et~~IDyD~~~k~a~e~-----kPK~i 170 (413)
T COG0112 98 S-QANQAVYLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDP-ETGLIDYDEVEKLAKEV-----KPKLI 170 (413)
T ss_pred h-HHHHHHHHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEeccccc-ccCccCHHHHHHHHHHh-----CCCEE
Confidence 5 5899999999999999999988887765322 11 113 3667777775 35689999999988876 89977
Q ss_pred EEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCc
Q 011801 196 IITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGF 275 (477)
Q Consensus 196 ii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~ 275 (477)
+..... .-..++ ++++.++|.+-|.++++|-++....-.+..+.+. .+...++.+|.+|+| +|-
T Consensus 171 i~G~Sa--Y~r~id---~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P---------~~~AdvVTtTTHKTl--rGP 234 (413)
T COG0112 171 IAGGSA--YSRPID---FKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNP---------LPHADVVTTTTHKTL--RGP 234 (413)
T ss_pred EECccc--cccccC---HHHHHHHHHHhCceEEehHHHHHHHHhcccCCCC---------CCccceEeCCcccCC--CCC
Confidence 654211 112334 7777778889999999999985432222222221 122346788999998 899
Q ss_pred eEEEEEeCCHHHHHHHHHhcccCCCchHHHHH-HHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCc-e
Q 011801 276 RVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYL-LASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNA-G 353 (477)
Q Consensus 276 RvG~i~~~~~~i~~~~~~~~~~~~vs~~~q~~-~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~-g 353 (477)
|-|.|++.++.+.+.+.+.-.++..+.+..+. ++....-.+.++--+++..+++.++.+.|.+.|.+.|+++..... +
T Consensus 235 rGG~Il~~~eel~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~G~~vvsGgTdn 314 (413)
T COG0112 235 RGGIILTNDEELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKERGFKVVSGGTDN 314 (413)
T ss_pred CceEEEeccHHHHHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHcCCeEecCCccc
Confidence 99999997767777666544444444443332 222222222112223556677788889999999999999876322 2
Q ss_pred EEEEeeccc-hhhccCchHHHHHHHHHHHhcCeEEe----CCCCCCCCCCCEEEEEecc-----CCHHHHHHHHHHHHHH
Q 011801 354 LFFWMDLRH-LLKEKTLEGEIALWRTIVNDVKLNVS----PGSSFQCTEPGWFRVCFAN-----MDDDTLQVALNRIAAF 423 (477)
Q Consensus 354 ~~~~~~l~~-~~~~~~~~~e~~l~~~ll~~~gI~v~----pg~~f~~~~~~~~Rl~~~~-----~~~e~l~~~l~~l~~~ 423 (477)
-.+.++++. .+.. .....+|.+.||.+. |...-.+-.+..+||+... +.++++++..+-|.++
T Consensus 315 Hl~lVDl~~~~~~G-------k~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~v 387 (413)
T COG0112 315 HLVLVDLRSKGLTG-------KKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADV 387 (413)
T ss_pred eEEEEEcccCCCCH-------HHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHH
Confidence 356688873 1111 234567777888763 3321112234569998754 3578999999999999
Q ss_pred Hhhhh
Q 011801 424 VQQDK 428 (477)
Q Consensus 424 ~~~~~ 428 (477)
+...+
T Consensus 388 l~~~~ 392 (413)
T COG0112 388 LDGLK 392 (413)
T ss_pred Hhccc
Confidence 97644
No 293
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.64 E-value=6.5e-16 Score=150.10 Aligned_cols=188 Identities=20% Similarity=0.297 Sum_probs=135.4
Q ss_pred ccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHH--HHhhhCCc
Q 011801 81 IFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDR--DLSWRTGV 158 (477)
Q Consensus 81 ~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~--~~~~~~g~ 158 (477)
.|.......++++.+++.++ .+..+++.++|.|+.+++.+++.|++.|++..+++..+.+ ......|.
T Consensus 24 ~Yg~D~~~~~l~~~i~~l~g----------~e~a~f~~sGT~An~~al~~~~~~~~~vi~~~~aHi~~~E~ga~~~~~G~ 93 (290)
T PF01212_consen 24 AYGEDPTTARLEERIAELFG----------KEAALFVPSGTMANQLALRAHLRPGESVICADTAHIHFDETGAIEELSGA 93 (290)
T ss_dssp CTTSSHHHHHHHHHHHHHHT----------SSEEEEESSHHHHHHHHHHHHHHTTEEEEEETTEHHHHSSTTHHHHHTTC
T ss_pred ccCCChhHHHHHHHHHHHcC----------CCEEEEeCCCChHHHHHHHHHHhcCCceeccccceeeeeccchhhHhcCc
Confidence 58777778889999999887 3566789999999999999999999999999998654332 23334599
Q ss_pred EEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCC-cccCCCHHHHHHHHHHHHhcCeEEEecccccccc
Q 011801 159 QIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNP-LGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATV 237 (477)
Q Consensus 159 ~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NP-tG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~ 237 (477)
++++++.+. +.++|+++|+++++....+..++++|.+++|+|- -|++++.+++++|.++|+++|+.++.|.+.....
T Consensus 94 ~~~~l~~~~--~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a 171 (290)
T PF01212_consen 94 KLIPLPSDD--DGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMDGARLANA 171 (290)
T ss_dssp EEEEEBECT--GTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHH
T ss_pred EEEECCCcc--cCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHh
Confidence 999999653 2479999999999876445568999999999987 4899999999999999999999999999874211
Q ss_pred cCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEE-EeCCHHHHHH
Q 011801 238 FSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIV-YSFNDTVVNC 290 (477)
Q Consensus 238 ~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i-~~~~~~i~~~ 290 (477)
.. ..-.++.++.. ..| .+..|++|.+|+++ |.+ +++++.+.+.
T Consensus 172 ~~-~~~~~~~e~~~----~~D--~v~~~~tK~~g~~~---Gavl~~~~~~i~~~ 215 (290)
T PF01212_consen 172 AA-ALGVSLAEIAA----GAD--SVSFGGTKNGGAPG---GAVLAGNKEFIAKA 215 (290)
T ss_dssp HC-HHHHHHHHHHT----TSS--EEEEETTSTT-SSS---EEEEEESHHHHHHH
T ss_pred hh-cccccHHHHhh----hCC--EEEEEEEccccccc---ceEEEechHHHHHH
Confidence 10 11134444433 223 45569999998876 555 4544434443
No 294
>PLN02271 serine hydroxymethyltransferase
Probab=99.64 E-value=2.6e-13 Score=139.50 Aligned_cols=301 Identities=15% Similarity=0.116 Sum_probs=189.2
Q ss_pred CcHHHHHHHHHHHhcccCCCCccCC----CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHh--------h
Q 011801 87 GLPEFRQAVAKFMGKGRGGRVTFDP----DRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLS--------W 154 (477)
Q Consensus 87 G~~~lr~aia~~~~~~~g~~~~~~~----~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~--------~ 154 (477)
...++.....+...+.++ .++ .+|..- +++.|+..++.+|++|||+|+..+..+++...... .
T Consensus 191 ~iD~iE~la~era~~lF~----~~~~~~gaNVQp~-SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs 265 (586)
T PLN02271 191 YIDQIERLCCERALAAFG----LDSEKWGVNVQPY-SCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVS 265 (586)
T ss_pred hHHHHHHHHHHHHHHHhC----Ccccccccceeec-cHHHHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccc
Confidence 344555444555555544 333 456666 45668999999999999999999888877654211 1
Q ss_pred hCCcE--EEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEeccc
Q 011801 155 RTGVQ--IVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEI 232 (477)
Q Consensus 155 ~~g~~--~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~ 232 (477)
..|.. +++++++. .+..+|.+++++..... ++|+|++..-.+| ..++ ++++.++|+++|+++++|.+
T Consensus 266 ~sG~~~~~vpY~~d~-~~g~IDyd~lek~a~~~-----rPKLII~g~Sayp--r~~D---~~~i~eIAdevGA~LmvD~A 334 (586)
T PLN02271 266 GASIFFESLPYKVNP-QTGYIDYDKLEEKALDF-----RPKILICGGSSYP--REWD---YARFRQIADKCGAVLMCDMA 334 (586)
T ss_pred cccceEEEEEccccc-ccCccCHHHHHHHhhhc-----CCeEEEECchhcc--CcCC---HHHHHHHHHHcCCEEEEECc
Confidence 12544 44544543 35679999999855433 8998888766777 6677 77778888899999999999
Q ss_pred ccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCH-------------------HHHHHHHH
Q 011801 233 YAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFND-------------------TVVNCGRK 293 (477)
Q Consensus 233 y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~-------------------~i~~~~~~ 293 (477)
+.........+.+. .....++.+|.+|++ .|-|-|.|+..++ .+.+.+.+
T Consensus 335 H~aGLIa~g~~~sP---------~~~aDvvt~TTHKtL--rGPrGG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~ 403 (586)
T PLN02271 335 HISGLVAAKECVNP---------FDYCDIVTSTTHKSL--RGPRGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINF 403 (586)
T ss_pred ccccccccCcCCCC---------CcCCcEEEeCCcccC--CCCCceEEEecccccccccCCccccccccccHHHHHHhhc
Confidence 97543333221111 112347889999998 6777899988542 12222221
Q ss_pred hcccCCC-chHH--HHHHHHhcC---ChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCC-ceEEEEeeccchhhc
Q 011801 294 MSSFGLV-SSQT--QYLLASMLS---DDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSN-AGLFFWMDLRHLLKE 366 (477)
Q Consensus 294 ~~~~~~v-s~~~--q~~~~~~L~---~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~-~g~~~~~~l~~~~~~ 366 (477)
.-..+.. ++.. .++++..+. .++| ++..+++.++.+.|.+.|.+.|+++.... .+-.+|++++..-
T Consensus 404 aVfPglqgGphn~~IAalAvalkea~~~ef-----k~Ya~QVv~NAkaLA~~L~~~G~~vv~ggTdnHlvLvDl~~~g-- 476 (586)
T PLN02271 404 AVFPSLQGGPHNNHIAALAIALKQVATPEY-----KAYMQQVKKNAQALASALLRRKCRLVTGGTDNHLLLWDLTTLG-- 476 (586)
T ss_pred ccCCccccChhHHHHHHHHHHHHHHhChHH-----HHHHHHHHHHHHHHHHHHHHCCCeEeeCCCCcceeeecCcccC--
Confidence 1111221 2111 222222232 3333 55667778889999999999999877532 2346788987531
Q ss_pred cCchHHHHHHHHHHHhcCeEEeCCCCCC---CCCCCEEEEEeccC-----CHHHHHHHHHHHHHHHh
Q 011801 367 KTLEGEIALWRTIVNDVKLNVSPGSSFQ---CTEPGWFRVCFANM-----DDDTLQVALNRIAAFVQ 425 (477)
Q Consensus 367 ~~~~~e~~l~~~ll~~~gI~v~pg~~f~---~~~~~~~Rl~~~~~-----~~e~l~~~l~~l~~~~~ 425 (477)
+.. ..+.++|++.||.+.--..++ +..++.+||+...+ .+++++++.+-|.++++
T Consensus 477 --~~G--~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 477 --LTG--KNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred --CCH--HHHHHHHHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 111 346677888899774322222 12356799988544 46889888888888876
No 295
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.62 E-value=4.2e-13 Score=137.62 Aligned_cols=312 Identities=13% Similarity=0.091 Sum_probs=193.6
Q ss_pred cHHHHHHHHHHHhcccCCCCccC-C-CcEEE--eCChHHHHHHHHHHhc--------CCC-----CeEEEcCCCccchHH
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFD-P-DRIVM--GGGATGANELIMFCLA--------NPG-----DAFLVPSPYYAAFDR 150 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~-~-~~i~~--t~G~t~al~~i~~~l~--------~~G-----d~vlv~~P~y~~~~~ 150 (477)
..++.+.+.+++.+..| ++ + +++.. |+|+|+|+.+++.+.. ..| ..|++..-.+..+..
T Consensus 78 ~~~le~~~~~~la~llg----~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~k 153 (431)
T TIGR01788 78 TAEIENRCVNMLADLWH----APAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEK 153 (431)
T ss_pred HHHHHHHHHHHHHHHhC----CCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHH
Confidence 34777777777776655 34 2 45544 8999999998876542 111 368888888999988
Q ss_pred HHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc------C
Q 011801 151 DLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDK------N 224 (477)
Q Consensus 151 ~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~------~ 224 (477)
.++.. |+++..+++++ +++.+|+++|++++++ ++.+|+++..+|.||.+.| +++|.++|+++ |
T Consensus 154 a~~~l-g~~v~~i~~d~-~~~~vd~~~L~~~i~~------~t~lV~~t~g~t~tG~idp---i~~I~~i~~~~~~~~~~~ 222 (431)
T TIGR01788 154 FARYF-DVELREVPMDP-GRYVIDPEQVVEAVDE------NTIGVVCILGTTYTGEYED---VKALNDALDEYNAKTGWD 222 (431)
T ss_pred HHHHc-CceeEEEecCC-CceeeCHHHHHHHHhh------CCeEEEEEeCCCCCcccCC---HHHHHHHHHHHHhhhCCC
Confidence 88877 99999999875 4568999999999975 6788899999999999999 78888888899 9
Q ss_pred eEEEecccccccc--cCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHH-HHHHHHHhccc----
Q 011801 225 IHLVCDEIYAATV--FSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDT-VVNCGRKMSSF---- 297 (477)
Q Consensus 225 ~~lI~De~y~~~~--~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~-i~~~~~~~~~~---- 297 (477)
+++++|.+|++.. |..+.. .. .+ . ......+..|.+|.+ +....+|.++..++. +...+.....|
T Consensus 223 ~~~HvDaaq~g~~~p~~~~~~-~~-~~-~----~~~~DSis~s~HK~~-~~P~g~G~l~~r~~~~l~~~~~~~~~yl~~~ 294 (431)
T TIGR01788 223 IPIHVDAASGGFIAPFVYPDL-EW-DF-R----LPRVKSINVSGHKYG-LVYPGVGWVIWRDEEALPEELIFHVNYLGGD 294 (431)
T ss_pred ceEEEecccHHHHHHHhCCCc-hh-hc-C----CCCceEEEECchhcc-CCCCCcEEEEEeChHHcchhheecccccCCC
Confidence 9999999998643 111111 10 00 0 123334667999976 244558999886653 22221111001
Q ss_pred ----CC-CchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEecC--CceEEEEeeccchhhccCc
Q 011801 298 ----GL-VSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLKS--NAGLFFWMDLRHLLKEKTL 369 (477)
Q Consensus 298 ----~~-vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~~--~~g~~~~~~l~~~~~~~~~ 369 (477)
.. .+...-.++..++.-..+-..-+++..++..+..+++.+.|++. ++++..+ ..+. +.++++.... ...
T Consensus 295 ~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~i-V~Fr~~~~~~-~~~ 372 (431)
T TIGR01788 295 EPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPL-VAFKLKDDAD-PGY 372 (431)
T ss_pred CCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceE-EEEEeCCCCC-CCc
Confidence 00 11111111122221000001224556667778888899999888 4777754 4443 3355543110 111
Q ss_pred hHHHHHHHHHHHhcCeEEeCCCCCC-CCCCCEEEEEecc-CCHHHHHHHHHHHHHHHhh
Q 011801 370 EGEIALWRTIVNDVKLNVSPGSSFQ-CTEPGWFRVCFAN-MDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 370 ~~e~~l~~~ll~~~gI~v~pg~~f~-~~~~~~~Rl~~~~-~~~e~l~~~l~~l~~~~~~ 426 (477)
. ..++.+. +++.|+.+..-..-. ..+.-.+|+++.. .+.+.++.+++.|++++..
T Consensus 373 ~-~~~l~~~-L~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (431)
T TIGR01788 373 T-LYDLSHR-LRERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEAALAY 429 (431)
T ss_pred C-HHHHHHH-HHHCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 1 1234444 455698653221100 1123468999953 4889999999999998865
No 296
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.62 E-value=1.7e-13 Score=137.27 Aligned_cols=297 Identities=17% Similarity=0.169 Sum_probs=171.2
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEE---eCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHH-----H-----hh
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVM---GGGATGANELIMFCLANPGDAFLVPSPYYAAFDRD-----L-----SW 154 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~---t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~-----~-----~~ 154 (477)
..++.+...+...+.++ .+|+...+ ..+++.|+..++.+|++|||+|+..++...++..- . .-
T Consensus 64 id~iE~la~~ra~~lF~----~~~~~w~anvqp~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~ 139 (399)
T PF00464_consen 64 IDEIEELAIERAKELFG----AEPKEWYANVQPHSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASG 139 (399)
T ss_dssp HHHHHHHHHHHHHHHHT-----STTTEEEE---SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHH
T ss_pred hhHHHHHHHHHHHHHhC----CCcccceEEeecCCchHHHHHHHHHHHhhcCcEEecChhhccccccccccccccccccc
Confidence 44555555555555555 44443332 34667799999999999999999999887665421 1 11
Q ss_pred hCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEeccccc
Q 011801 155 RTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYA 234 (477)
Q Consensus 155 ~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~ 234 (477)
. ..+.+++++++ ++..+|.+++++.+++. ++|+|++..-+.|- .++ ++++.++|.+.|.+|++|-++.
T Consensus 140 ~-~~~~~~y~~d~-~~~~ID~d~l~~~a~~~-----kPklIi~G~S~y~~--~~d---~~~~reIad~vga~l~~D~sH~ 207 (399)
T PF00464_consen 140 L-YFESVPYPVDP-DTGLIDYDELEKLAKEH-----KPKLIICGASSYPR--PID---FKRFREIADEVGAYLMADISHI 207 (399)
T ss_dssp H-HSEEEEEEB-T-TTSSB-HHHHHHHHHHH-------SEEEEE-SSTSS--------HHHHHHHHHHTT-EEEEE-TTT
T ss_pred c-eEEEEeeeeec-CCCeECHHHHHHHHhhc-----CCCEEEECchhccC--ccC---HHHHHHHHHhcCcEEEeccccc
Confidence 2 46788899885 46789999999999887 89987775333222 233 7777888889999999999985
Q ss_pred ccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeC-------------CHHHHHHHHHhcccCCCc
Q 011801 235 ATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSF-------------NDTVVNCGRKMSSFGLVS 301 (477)
Q Consensus 235 ~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~-------------~~~i~~~~~~~~~~~~vs 301 (477)
.....+.-+.+... ...++.+|.+|+| +|-|-|.|++. ++.+.+.+.+....+..+
T Consensus 208 ~GLIa~g~~~~P~~---------~ADvvt~sThKtl--~GPrggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg 276 (399)
T PF00464_consen 208 AGLIAGGLFPNPFP---------YADVVTGSTHKTL--RGPRGGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQG 276 (399)
T ss_dssp HHHHHTTSS--GCC---------TSSEEEEESSGGG---SSS-EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-S
T ss_pred ccceehheecCccc---------cceEEEeeccccc--cccCceEEEEcCCccccCCcccccHHHHHHHhccccCCCccc
Confidence 43222222222111 1337789999999 89999999997 366666665443333332
Q ss_pred -hHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecC-CceEEEEeeccchhhccCchHHHHHHHHH
Q 011801 302 -SQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKS-NAGLFFWMDLRHLLKEKTLEGEIALWRTI 379 (477)
Q Consensus 302 -~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~-~~g~~~~~~l~~~~~~~~~~~e~~l~~~l 379 (477)
+....+++.+..-.+......++..+++.++.+.|.+.|.+.|+++... ..+-.+|++++... +. ...+...
T Consensus 277 ~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~~G~~v~~ggTd~H~vlvd~~~~~----~~--g~~a~~~ 350 (399)
T PF00464_consen 277 GPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQERGFKVVTGGTDNHQVLVDLRSFG----ID--GKEAEKA 350 (399)
T ss_dssp S--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTT-EEGGGS-SSSEEEEEGGGGT----S---HHHHHHH
T ss_pred CcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhhCCcEEEECCCCCCeEEEEecccc----cc--hHHHHHH
Confidence 2222222211111111122235667778889999999999999988742 22347789987521 11 1245677
Q ss_pred HHhcCeEEe----CCCCCCCCCCCEEEEEeccC-----CHHHHHHHHH
Q 011801 380 VNDVKLNVS----PGSSFQCTEPGWFRVCFANM-----DDDTLQVALN 418 (477)
Q Consensus 380 l~~~gI~v~----pg~~f~~~~~~~~Rl~~~~~-----~~e~l~~~l~ 418 (477)
+++.||.+. |+.. .+..+..+||+...+ .+++++++.+
T Consensus 351 Le~~gI~vnkn~iP~d~-~~~~~sGlRlGT~~lT~rG~~e~dm~~iA~ 397 (399)
T PF00464_consen 351 LEEAGIIVNKNTIPGDR-SPFVPSGLRLGTPALTRRGMKEEDMKEIAE 397 (399)
T ss_dssp HHHTTEE-EEE--TTTS-TTTT-SEEEEESHHHHHTT--HHHHHHHHH
T ss_pred HHhcCeeecccccCCCC-CCCCCCEEEECCHHHHhCCCCHHHHHHHHh
Confidence 889999875 3331 112245799998543 4556555443
No 297
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.62 E-value=7.6e-13 Score=131.45 Aligned_cols=339 Identities=15% Similarity=0.176 Sum_probs=200.5
Q ss_pred CCCCccccccccccccc----cHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCcc
Q 011801 34 TQNPGGVIQLGLAENQL----CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTF 109 (477)
Q Consensus 34 ~~~~~~~i~l~~~~n~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~ 109 (477)
+-..+..||+.++--++ ..+.+.+++.+.. +.-..|..+ .++.-.+|+.+.+..+
T Consensus 49 DvDGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l-------------~~G~~fg~P---te~Ei~~Aell~~~~p----- 107 (432)
T COG0001 49 DVDGNEYIDYVLGWGPLILGHAHPAVVEAVQEQL-------------ERGLSFGAP---TELEVELAELLIERVP----- 107 (432)
T ss_pred eCCCCEeeehhccCcccccCCCCHHHHHHHHHHH-------------HhcCCCCCC---CHHHHHHHHHHHHhcC-----
Confidence 44455678887665444 3466777776631 223456544 3666677777765432
Q ss_pred CCCcEEEeCChHHHHHHHHHHh--cCCCCeEEEcCCCccchHHHHhhhCCc-------------------EEEEEeccCC
Q 011801 110 DPDRIVMGGGATGANELIMFCL--ANPGDAFLVPSPYYAAFDRDLSWRTGV-------------------QIVPVHCDIS 168 (477)
Q Consensus 110 ~~~~i~~t~G~t~al~~i~~~l--~~~Gd~vlv~~P~y~~~~~~~~~~~g~-------------------~~~~v~~~~~ 168 (477)
.-+.|-+++++|+|...+++.- ...-|+|+..+-+|++....+....|. .++.+|
T Consensus 108 ~~e~vrfvnSGTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~---- 183 (432)
T COG0001 108 SIEKVRFVNSGTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLP---- 183 (432)
T ss_pred cccEEEEecchhHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEec----
Confidence 2389999999999999888663 122388999999998876554332221 112222
Q ss_pred CCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHH-HHHHHHHHHHhcCeEEEecccccccccCCCCcccHH
Q 011801 169 NNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRD-TLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVA 247 (477)
Q Consensus 169 ~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~-~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~ 247 (477)
|+ |++++++++++. +.++.+|++.----..|.+.+.+ -++.|.++|+++|+++|.||+.-++...-.......
T Consensus 184 --yN-D~~al~~~~~~~---g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~ 257 (432)
T COG0001 184 --YN-DLEALEEAFEEY---GDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYY 257 (432)
T ss_pred --CC-CHHHHHHHHHHc---CCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCccccccc
Confidence 22 799999998864 45788766653334566665555 599999999999999999999987644422222222
Q ss_pred HhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhcc-c--C--CCchHHHHHHHHhcCChhhHHHHH
Q 011801 248 EVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSS-F--G--LVSSQTQYLLASMLSDDEFVDNFL 322 (477)
Q Consensus 248 ~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~~-~--~--~vs~~~q~~~~~~L~~~~~~~~~~ 322 (477)
.+ .+| +.+|.|.+| .|+.+|.+.+.. .+.+....... | + ..++++..+..+.|..-.- +
T Consensus 258 gi------~PD----lttlGKiIG-GGlP~ga~gGr~-eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~-~--- 321 (432)
T COG0001 258 GV------EPD----LTTLGKIIG-GGLPIGAFGGRA-EIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMT-E--- 321 (432)
T ss_pred Cc------Ccc----hhhhhhhhc-CCcceeeeccHH-HHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHh-c---
Confidence 22 333 458899999 999999998844 44443322111 1 1 1345555555544432110 0
Q ss_pred HHHHHHHHHHHHHHHHHH----hhCCCeEecC-CceEEEEeeccc----hhhcc--CchHHHHHHHHHHHhcCeEEeCCC
Q 011801 323 VETSKRLAKRHHNFTKGL----EQVGINCLKS-NAGLFFWMDLRH----LLKEK--TLEGEIALWRTIVNDVKLNVSPGS 391 (477)
Q Consensus 323 ~~~~~~l~~r~~~l~~~L----~~~gi~~~~~-~~g~~~~~~l~~----~~~~~--~~~~e~~l~~~ll~~~gI~v~pg~ 391 (477)
+...+++.+.-+.|.++| .+.|+++.-. .+++|...-.+. ..+.. ..+.-..+.+.++++ ||++.|+.
T Consensus 322 ~~~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~-GV~l~ps~ 400 (432)
T COG0001 322 EGVYERLDALGERLAEGLRAAAERHGIPLTVNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLNR-GVYLAPSQ 400 (432)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHHHhC-CcccCCcc
Confidence 002233334444444444 4557765532 333433221121 11111 111123455666655 99998763
Q ss_pred CCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhhh
Q 011801 392 SFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQQD 427 (477)
Q Consensus 392 ~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~~ 427 (477)
| +.+| +|.+ +++++++..++++.+++++.
T Consensus 401 -~----ea~f-lS~a-hte~di~~~~~a~~~~~~~~ 429 (432)
T COG0001 401 -F----EAGF-LSTA-HTEEDIDRTLEAADEAFKEL 429 (432)
T ss_pred -c----ccee-eecc-cCHHHHHHHHHHHHHHHHHh
Confidence 2 2344 6776 49999999999999988764
No 298
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.62 E-value=5.5e-13 Score=139.60 Aligned_cols=320 Identities=14% Similarity=0.157 Sum_probs=193.1
Q ss_pred ccCCCCCcHHHHHHHHHHHhcccCCC--------Ccc-CCCcEEEeCChHHHHHHHHHHhc----C--------------
Q 011801 81 IFQDYHGLPEFRQAVAKFMGKGRGGR--------VTF-DPDRIVMGGGATGANELIMFCLA----N-------------- 133 (477)
Q Consensus 81 ~Y~~~~G~~~lr~aia~~~~~~~g~~--------~~~-~~~~i~~t~G~t~al~~i~~~l~----~-------------- 133 (477)
.+...+...++.+.+.+|+.+..+.. ... +...-++|+|+|+|+..++.+-. .
T Consensus 120 ~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~ 199 (522)
T TIGR03799 120 KIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLF 199 (522)
T ss_pred eeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccch
Confidence 34445567899999999998765310 000 11236789999999988775521 1
Q ss_pred --------CCCeEEEcCCCccchHHHHhhhCCc---EEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCC
Q 011801 134 --------PGDAFLVPSPYYAAFDRDLSWRTGV---QIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSN 202 (477)
Q Consensus 134 --------~Gd~vlv~~P~y~~~~~~~~~~~g~---~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~N 202 (477)
++..|++..-.+....+.+... |+ +++.+|+++ ++.+|+++|++++++..+.+.++-+|+-+..++
T Consensus 200 ~~~~~~~~~~~~v~~S~~~H~S~~kaa~~l-glg~~~v~~vp~d~--~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt 276 (522)
T TIGR03799 200 AALKHYGYDGLAILVSERGHYSLGKAADVL-GIGRDNLIAIKTDA--NNRIDVDALRDKCAELAEQNIKPLAIVGVAGTT 276 (522)
T ss_pred hhhhhccCCceEEEECCCchHHHHHHHHHc-CCCcccEEEEEeCC--CCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCc
Confidence 1346888888888888887776 87 788899874 568999999999987665554444444456677
Q ss_pred CcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEe
Q 011801 203 PLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYS 282 (477)
Q Consensus 203 PtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~ 282 (477)
.||.+-+ +++|+++|+++|+++++|.+|++...-.+.+. ..+.. ......+..|.+|.++ ....+|.++.
T Consensus 277 ~tGaiDp---l~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r---~~l~g---le~aDSit~d~HK~l~-~P~g~G~llv 346 (522)
T TIGR03799 277 ETGNIDP---LDEMADIAQELGCHFHVDAAWGGATLLSNTYR---HLLKG---IERADSVTIDAHKQLY-VPMGAGMVLF 346 (522)
T ss_pred CCCCcCC---HHHHHHHHHHcCCeEEEEchhhhHHHhCHHHH---HHhcC---chhCCEEEEChhhcCC-cCcccEEEEE
Confidence 9999999 88899999999999999999986432222111 11110 1123456779999775 5577999988
Q ss_pred CCHHHHHHHHHhccc------------CC-Cch----HHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-C
Q 011801 283 FNDTVVNCGRKMSSF------------GL-VSS----QTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-G 344 (477)
Q Consensus 283 ~~~~i~~~~~~~~~~------------~~-vs~----~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-g 344 (477)
.++...+.+.....| .. .+. +..+++...+.... +++..++..+..+++.+.|.+. +
T Consensus 347 r~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al~lw~aL~~lG~~G-----~~~ii~~~~~la~~l~~~L~~~~~ 421 (522)
T TIGR03799 347 KDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAMLVYAGLHIIGRKG-----YELLIDQSIEKAKYFADLIQQQPD 421 (522)
T ss_pred eCHHHHHHhccCcchhcCCCCCccccceeecCcchHHHHHHHHHHHHhHHH-----HHHHHHHHHHHHHHHHHHHhhCCC
Confidence 765543333221111 00 111 12223333333322 4566667777888899999876 7
Q ss_pred CeEecC-CceEEEEeec-cchhhcc----------C----chHH-HHHHHHHHHhcCeEEeCCC----CCCCCCCCEEEE
Q 011801 345 INCLKS-NAGLFFWMDL-RHLLKEK----------T----LEGE-IALWRTIVNDVKLNVSPGS----SFQCTEPGWFRV 403 (477)
Q Consensus 345 i~~~~~-~~g~~~~~~l-~~~~~~~----------~----~~~e-~~l~~~ll~~~gI~v~pg~----~f~~~~~~~~Rl 403 (477)
++++.+ .-++.+ +++ |..+... . .+.- ..+.+++.++-.+.+++.. .+...+.-.||+
T Consensus 422 ~el~~~p~l~iv~-Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~~lR~ 500 (522)
T TIGR03799 422 FELVTEPELCLLT-YRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTVVFRV 500 (522)
T ss_pred eEEecCCCccEEE-EEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcEEEEE
Confidence 887654 344433 333 3222110 0 0000 1233333334233343221 111111246999
Q ss_pred EeccC--CHHHHHHHHHH
Q 011801 404 CFANM--DDDTLQVALNR 419 (477)
Q Consensus 404 ~~~~~--~~e~l~~~l~~ 419 (477)
|+.+. ++++++.+++.
T Consensus 501 ~~~np~tt~~~i~~~l~~ 518 (522)
T TIGR03799 501 VLANPLTTHEILQDILDE 518 (522)
T ss_pred EecCCCCCHHHHHHHHHH
Confidence 99885 67888877654
No 299
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.62 E-value=5.9e-13 Score=138.00 Aligned_cols=342 Identities=11% Similarity=0.100 Sum_probs=194.2
Q ss_pred CCCccccccccc--cccc--cHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccC
Q 011801 35 QNPGGVIQLGLA--ENQL--CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFD 110 (477)
Q Consensus 35 ~~~~~~i~l~~~--~n~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~ 110 (477)
.+.+..||+..+ ...+ +.+.+.+++.+.-+ .+..+..+ -..+.+..+|+.+.+... -.
T Consensus 79 ~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~-------------~l~~~~~~-~~~~~~~~lae~L~~~~p----~~ 140 (459)
T PRK11522 79 TQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLA-------------KQPLHSQE-LLDPLRAMLAKTLAALTP----GK 140 (459)
T ss_pred CCCCEEEECCcCHHhhhcCCCCHHHHHHHHHHHh-------------hCcccccc-cCCHHHHHHHHHHHHhCC----CC
Confidence 345567787544 3444 34666666665321 11111111 113445555555543321 12
Q ss_pred CCcEEEeCChHHHHHHHHHHhc--C--CC-CeEEEcCCCccchHHHHhhhCCcEEEE---EeccCC---CCcccCHHHHH
Q 011801 111 PDRIVMGGGATGANELIMFCLA--N--PG-DAFLVPSPYYAAFDRDLSWRTGVQIVP---VHCDIS---NNFKITREALE 179 (477)
Q Consensus 111 ~~~i~~t~G~t~al~~i~~~l~--~--~G-d~vlv~~P~y~~~~~~~~~~~g~~~~~---v~~~~~---~~f~i~~~~l~ 179 (477)
.+++++++++++|++.+++.-. . +| ..|+...-+|++....+...+|..... .+..+. -.|. |.++++
T Consensus 141 ~~~v~f~~SGsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~-d~~~l~ 219 (459)
T PRK11522 141 LKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFG-NIEAMR 219 (459)
T ss_pred CCEEEEeCCchHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCC-CHHHHH
Confidence 3689999999999999987632 1 23 368888888888654432222321111 010000 0111 678888
Q ss_pred HHHHHHHHhCCCeeEEEEeCCCCCcccCC-CHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCC
Q 011801 180 AAYERAQEASINIKGLIITNPSNPLGTTL-DRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRD 258 (477)
Q Consensus 180 ~~~~~~~~~~~~~k~vii~nP~NPtG~~~-~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~ 258 (477)
+.+++....+.++.+|++..-..-.|.+. +.+.++++.++|+++|+++|+||++.++.-.+..+ . .+..+..+|
T Consensus 220 ~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~-a----~e~~gv~PD 294 (459)
T PRK11522 220 TALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMF-A----CEHENVQPD 294 (459)
T ss_pred HHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhh-h----hhccCCCCC
Confidence 88865433344676666654455567654 66679999999999999999999997642223211 1 111122344
Q ss_pred cEEEEecCCcccCCCC-ceEEEEEeCCHHHHHHHH--Hh---cccCCCchHHHHHHHHhcC---ChhhHHHHHHHHHHHH
Q 011801 259 LIHIIYSLSKDMGLPG-FRVGIVYSFNDTVVNCGR--KM---SSFGLVSSQTQYLLASMLS---DDEFVDNFLVETSKRL 329 (477)
Q Consensus 259 ~viiv~SlSK~~g~~G-~RvG~i~~~~~~i~~~~~--~~---~~~~~vs~~~q~~~~~~L~---~~~~~~~~~~~~~~~l 329 (477)
++ +|+|.+| .| +.+|.+++.++ +.+... .. .+|+ .++.+..++.+.|+ +.++ .+++
T Consensus 295 --iv--t~gK~lg-gG~~Pigav~~~~~-i~~~~~~~~~~~~~T~~-gnp~~~Aaala~L~~i~~~~l--------~~~~ 359 (459)
T PRK11522 295 --IL--CLAKALG-GGVMPIGATIATEE-VFSVLFDNPFLHTTTFG-GNPLACAAALATINVLLEQNL--------PAQA 359 (459)
T ss_pred --EE--Eechhhh-CCCccceeEEEcHH-HHHHhccCCcccCCCCC-CCHHHHHHHHHHHHHHhcchH--------HHHH
Confidence 22 8899998 78 69999999654 333321 11 1122 35555555544443 3222 2333
Q ss_pred HHHHHHHHHHHhhC----C--CeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEE
Q 011801 330 AKRHHNFTKGLEQV----G--INCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRV 403 (477)
Q Consensus 330 ~~r~~~l~~~L~~~----g--i~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl 403 (477)
++.-++|.+.|+++ + +.-. ...|+++.+.+... +....++..+++ +||.+.+.. .....+|+
T Consensus 360 ~~~g~~l~~~L~~l~~~~~~~i~~V-rG~Gl~~giel~~~------~~~~~i~~~l~~-~Gvl~~~~~----~~~~~lr~ 427 (459)
T PRK11522 360 EQKGDYLLDGFRQLAREYPDLVQEA-RGKGMLMAIEFVDN------EIGYNFASEMFR-QRVLVAGTL----NNAKTIRI 427 (459)
T ss_pred HHHHHHHHHHHHHHHHhCCCceeeE-EeceeEEEEEecCc------hHHHHHHHHHHH-CCeEEEecC----CCCCEEEE
Confidence 34444455555443 2 1112 23467888887642 111245566655 699997542 12468999
Q ss_pred Eecc-CCHHHHHHHHHHHHHHHhhh
Q 011801 404 CFAN-MDDDTLQVALNRIAAFVQQD 427 (477)
Q Consensus 404 ~~~~-~~~e~l~~~l~~l~~~~~~~ 427 (477)
+.+. ++++++++++++|.+++++.
T Consensus 428 ~Ppl~~t~~~id~~l~~l~~~l~~~ 452 (459)
T PRK11522 428 EPPLTLTIEQCEQVLKAARKALAAM 452 (459)
T ss_pred ECCccCCHHHHHHHHHHHHHHHHHH
Confidence 9876 49999999999999998764
No 300
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.61 E-value=1.1e-12 Score=135.00 Aligned_cols=333 Identities=12% Similarity=0.057 Sum_probs=189.6
Q ss_pred CCCccccccccc--cccc--cHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccC
Q 011801 35 QNPGGVIQLGLA--ENQL--CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFD 110 (477)
Q Consensus 35 ~~~~~~i~l~~~--~n~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~ 110 (477)
.+.+..||+..+ .+.+ +.|.+.+.+.+.-+. ......|-. .+.+..+|+.+.+... -.
T Consensus 72 ~dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~----------l~~~~~~~~----~~~~~~lAe~L~~~~p----~~ 133 (442)
T TIGR03372 72 TQGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAK----------QPLHSQELL----DPLRALLAKTLAALTP----GK 133 (442)
T ss_pred CCCCEEEECCccHHhhhcCCCCHHHHHHHHHHHHh----------CCCcccccC----CHHHHHHHHHHHHhCC----CC
Confidence 345567887554 4444 346666666553111 001111211 3444555555543321 12
Q ss_pred CCcEEEeCChHHHHHHHHHHhcC-----CCCeEEEcCCCccchHHHHhhhCCcE------------EEEEeccCCCCccc
Q 011801 111 PDRIVMGGGATGANELIMFCLAN-----PGDAFLVPSPYYAAFDRDLSWRTGVQ------------IVPVHCDISNNFKI 173 (477)
Q Consensus 111 ~~~i~~t~G~t~al~~i~~~l~~-----~Gd~vlv~~P~y~~~~~~~~~~~g~~------------~~~v~~~~~~~f~i 173 (477)
.+.+++++++++|++.+++.-.. ....|+...-+|++....+...++-. +..+|. .
T Consensus 134 ~~~v~f~~SGsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~-------~ 206 (442)
T TIGR03372 134 LKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAF-------G 206 (442)
T ss_pred cCEEEEeCCchHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCC-------C
Confidence 25799999999999999876321 23578988988887654332221211 111221 1
Q ss_pred CHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCC-CHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhh
Q 011801 174 TREALEAAYERAQEASINIKGLIITNPSNPLGTTL-DRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQE 252 (477)
Q Consensus 174 ~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~-~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~ 252 (477)
|.+++++.+++....+.++.+|++..-..-.|... +++-++++.++|+++|+++|+||++.++.-.+.. .... .
T Consensus 207 d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~-~a~e----~ 281 (442)
T TIGR03372 207 DIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKM-FACE----H 281 (442)
T ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccc-hhhh----h
Confidence 56777777765433344677766654345567655 6777999999999999999999999764323321 1111 1
Q ss_pred ccCCCCcEEEEecCCcccCCCC-ceEEEEEeCCHHHHHHHHH-----hcccCCCchHHHHHHHHhcC---ChhhHHHHHH
Q 011801 253 MDCNRDLIHIIYSLSKDMGLPG-FRVGIVYSFNDTVVNCGRK-----MSSFGLVSSQTQYLLASMLS---DDEFVDNFLV 323 (477)
Q Consensus 253 ~~~~~~~viiv~SlSK~~g~~G-~RvG~i~~~~~~i~~~~~~-----~~~~~~vs~~~q~~~~~~L~---~~~~~~~~~~ 323 (477)
.+..+| ++ +|+|.+| .| +.+|.+++.++ +.+.+.. ..+|+ .++++..++.+.|+ +.++
T Consensus 282 ~gv~PD--iv--t~gK~lg-~G~~Pigavv~~~~-i~~~~~~~~~~~~~T~~-gnp~~~Aaa~a~L~~i~~~~l------ 348 (442)
T TIGR03372 282 EGVQPD--IL--CLAKALG-GGVMPIGATIATEA-VFSVLFDNPFLHTTTFG-GNPLACAAALATINELLEKNL------ 348 (442)
T ss_pred cCCCCC--ee--eehhhhc-CCcccceEEEecHH-HHHhhhccCccccCCCC-CCHHHHHHHHHHHHHHHhccH------
Confidence 122334 22 6899998 88 69999998544 4443321 11222 35555555555553 2222
Q ss_pred HHHHHHHHHHHHHHHHHhh----CC--CeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCC
Q 011801 324 ETSKRLAKRHHNFTKGLEQ----VG--INCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTE 397 (477)
Q Consensus 324 ~~~~~l~~r~~~l~~~L~~----~g--i~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~ 397 (477)
.++.++.-+++.+.|++ .+ +.-. ...|+++.+.+... .....++..+++ +||++.+... .
T Consensus 349 --~~~~~~~G~~l~~~L~~l~~~~~~~i~~v-RG~Gl~~giel~~~------~~~~~i~~~l~~-~Gvl~~~~~~----~ 414 (442)
T TIGR03372 349 --PAQAAIKGDFLLDGFQQLAAEYPDLIIEA-RGKGLLMAIEFRDN------EIGYAFAKELFQ-QNILVAGTLN----N 414 (442)
T ss_pred --HHHHHHHHHHHHHHHHHHHHhCCCceEEE-ecceEEEEEEeCCh------HHHHHHHHHHHH-CCcEEeecCC----C
Confidence 12222333334444433 22 1112 24578888888642 111245666665 5999975321 1
Q ss_pred CCEEEEEeccC-CHHHHHHHHHHHHHHH
Q 011801 398 PGWFRVCFANM-DDDTLQVALNRIAAFV 424 (477)
Q Consensus 398 ~~~~Rl~~~~~-~~e~l~~~l~~l~~~~ 424 (477)
+..+|+..... +++++++++++|.+.+
T Consensus 415 ~~~lr~~Ppl~~t~~~id~~~~~l~~~~ 442 (442)
T TIGR03372 415 AKSIRIEPPLTITIEQCALVIKAAKDAL 442 (442)
T ss_pred CCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 35799988764 9999999999998753
No 301
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.61 E-value=1.4e-12 Score=135.13 Aligned_cols=294 Identities=13% Similarity=0.094 Sum_probs=162.9
Q ss_pred CcEEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCccchHHHHhhhCCc-------------EEEEEeccCC--CCcc--
Q 011801 112 DRIVMGGGATGANELIMFCLA--NPGDAFLVPSPYYAAFDRDLSWRTGV-------------QIVPVHCDIS--NNFK-- 172 (477)
Q Consensus 112 ~~i~~t~G~t~al~~i~~~l~--~~Gd~vlv~~P~y~~~~~~~~~~~g~-------------~~~~v~~~~~--~~f~-- 172 (477)
+++++++++++|++.+++.-. .....|+...-+|++....+...+|. .++.+|.... ..|.
T Consensus 114 ~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 193 (457)
T PRK05639 114 PKVLFGLSGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGIN 193 (457)
T ss_pred CEEEEeCchHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCcccccccccc
Confidence 689999999999999987642 23357888888888754322211110 1223332210 0010
Q ss_pred --cCHHH--------HHHHHHHHHHhCCCeeEEEEeCCCCCcccC-CCHHHHHHHHHHHHhcCeEEEecccccccccCCC
Q 011801 173 --ITREA--------LEAAYERAQEASINIKGLIITNPSNPLGTT-LDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSP 241 (477)
Q Consensus 173 --i~~~~--------l~~~~~~~~~~~~~~k~vii~nP~NPtG~~-~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~ 241 (477)
-+.++ +++.+........++.+||+.--....|.+ .+.+-+++|.++|+++|+++|+||++.++.-.+.
T Consensus 194 ~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~ 273 (457)
T PRK05639 194 GYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGK 273 (457)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCch
Confidence 02232 222221111123467777765334555764 4677899999999999999999999987422332
Q ss_pred CcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHH--hcccCCCchHHHHHHHHhcCChhhHH
Q 011801 242 KFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRK--MSSFGLVSSQTQYLLASMLSDDEFVD 319 (477)
Q Consensus 242 ~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~--~~~~~~vs~~~q~~~~~~L~~~~~~~ 319 (477)
.+. .+. .+..+| ++ +|+|.+| .|+.+|.+++.++ +.+.... ..+++ .++.+..++.+.|+--+- +
T Consensus 274 ~~a--~~~---~gv~PD--iv--~~gK~l~-gG~pi~av~~~~~-i~~~~~~~~~~T~~-g~p~~~aaa~a~l~~l~~-~ 340 (457)
T PRK05639 274 WFA--SEW---FEVKPD--LI--IFGKGVA-SGMGLSGVIGRKE-LMDLTSGSALLTPA-ANPVISAAAEATLEIIEE-E 340 (457)
T ss_pred HHH--HHh---cCCCCC--EE--Eechhhc-CCCcceeEEehHH-HHhhcCCCcccCCC-cCHHHHHHHHHHHHHHHH-c
Confidence 211 111 122334 33 3899998 8999999999555 4332111 11222 445544444444432110 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh----CCCeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCC
Q 011801 320 NFLVETSKRLAKRHHNFTKGLEQ----VGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQC 395 (477)
Q Consensus 320 ~~~~~~~~~l~~r~~~l~~~L~~----~gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~ 395 (477)
+.+ ++.++.-++|.+.|++ .++...-..-|+++.+.+.........+....++..++ ++||.+.+..
T Consensus 341 ~l~----~~~~~~g~~l~~~L~~l~~~~~~~~~VrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~-~~Gv~~~~~g---- 411 (457)
T PRK05639 341 NLL----KNALKVGEFIKKRLLEMKESFEVIGDVRGKGLMIGVEIVKENGKPDPELTGKICWRAF-ELGLILPSYG---- 411 (457)
T ss_pred cHH----HHHHHHHHHHHHHHHHHHHhCCCEEeeccceeEEEEEEecCCCCCCHHHHHHHHHHHH-hCCeEEeecC----
Confidence 111 2222233334444433 34332234456787777742111111111224555555 4699997642
Q ss_pred CCCCEEEEEeccC-CHHHHHHHHHHHHHHHhhh
Q 011801 396 TEPGWFRVCFANM-DDDTLQVALNRIAAFVQQD 427 (477)
Q Consensus 396 ~~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~~~ 427 (477)
.....+|+..... +++++++++++|.+.+++.
T Consensus 412 ~~~~~lr~~Ppl~it~~~id~~~~~l~~~l~~~ 444 (457)
T PRK05639 412 MFGNVIRITPPLVITKEIAEKGLEIMERAIKDA 444 (457)
T ss_pred CCCCEEEEeCCCccCHHHHHHHHHHHHHHHHHH
Confidence 1246899998764 9999999999999999764
No 302
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.61 E-value=1.4e-13 Score=138.78 Aligned_cols=284 Identities=14% Similarity=0.097 Sum_probs=180.0
Q ss_pred HHHHHHHHHHHhcccCCCCcc-CCCcEEE-eCChHHHHHHHHHHhcCCCCeEEEcCCCccc--hHHHHhhhCCcEEEEEe
Q 011801 89 PEFRQAVAKFMGKGRGGRVTF-DPDRIVM-GGGATGANELIMFCLANPGDAFLVPSPYYAA--FDRDLSWRTGVQIVPVH 164 (477)
Q Consensus 89 ~~lr~aia~~~~~~~g~~~~~-~~~~i~~-t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~--~~~~~~~~~g~~~~~v~ 164 (477)
.+.++.++++++ . +..+|++ +++++.+++.++..++.+||++++..-...+ +.+.++.. |.. ..+.
T Consensus 51 ~~~~~~l~~l~~--------~~~~~~v~~~~gsgt~~~Ea~~~nl~~~g~~~l~i~~G~fg~r~~~~a~~~-g~~-~~~~ 120 (360)
T PRK05355 51 EEAEADLRELLN--------IPDNYKVLFLQGGASLQFAMVPMNLLGGGKKADYVDTGSWSKKAIKEAKKY-GEV-NVAA 120 (360)
T ss_pred HHHHHHHHHHhC--------CCCCcEEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHh-CCc-eEEe
Confidence 345555555554 2 2234555 5779999999999999999988877655433 33445555 754 5555
Q ss_pred ccCCCCcccCHHHHHH-HHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCc
Q 011801 165 CDISNNFKITREALEA-AYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKF 243 (477)
Q Consensus 165 ~~~~~~f~i~~~~l~~-~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~ 243 (477)
.+...++ .+..++++ ++++ ++++|.+++..+.||...+ ++.+| +|+++|+|.+.+ +...+
T Consensus 121 ~~~~~g~-~~~~~~~~~~l~~------~~~~V~~th~eTstGv~~~--~i~~i------~g~l~vVDavss---~g~~~- 181 (360)
T PRK05355 121 SSEDDGF-TYIPPLDEWQLSD------DAAYVHYTSNETIDGTEFH--ELPDT------GDVPLVADMSSD---ILSRP- 181 (360)
T ss_pred cccccCC-CCCCChhhccCCC------CCCEEEEccCCCcceEecC--ccccc------CCCcEEEEcCcc---ccCcc-
Confidence 4432233 23333444 4432 6899999999999999984 25544 799999999997 44433
Q ss_pred ccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHH-------------HhcccCCCchHHHHHHHH
Q 011801 244 TSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGR-------------KMSSFGLVSSQTQYLLAS 310 (477)
Q Consensus 244 ~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~-------------~~~~~~~vs~~~q~~~~~ 310 (477)
..+.+ .+ +++.|..|.+|.|| +|+++.+++.+..... ....+++.+...-+++.+
T Consensus 182 idv~~--------~d--~~~~ssqK~lgP~G--lg~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~ 249 (360)
T PRK05355 182 IDVSK--------FG--LIYAGAQKNIGPAG--LTIVIVREDLLGRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGL 249 (360)
T ss_pred CCHHH--------cc--EEEEeccccccCCc--eEEEEECHHHHhhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHH
Confidence 33322 23 77889999999666 8888887765533211 011234445555555555
Q ss_pred hcCChhhHHH-HHHHHHHHHHHHHHHHHHHHhhCCCe-EecC---CceEEEEeeccchhhccCchHHHHHHHHHHHhcCe
Q 011801 311 MLSDDEFVDN-FLVETSKRLAKRHHNFTKGLEQVGIN-CLKS---NAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKL 385 (477)
Q Consensus 311 ~L~~~~~~~~-~~~~~~~~l~~r~~~l~~~L~~~gi~-~~~~---~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI 385 (477)
.|+.-. +. -+++..++.++..+++.++|+++|+. ...+ ..+..+.+.++... .. .++...+ .+.|+
T Consensus 250 aL~~i~--~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~sf~~~~~~-----~~-~~~~~~~-~~~Gi 320 (360)
T PRK05355 250 VFKWLK--EQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNVPFTLADEE-----LD-KKFLAEA-KAAGL 320 (360)
T ss_pred HHHHHH--HccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEEEEEcCChH-----HH-HHHHHHH-HHCCC
Confidence 554211 11 25677788888889999999998752 2111 23234556666531 11 1333433 45699
Q ss_pred EEeCCCCCCCCCCCEEEEEeccC-CHHHHHHHHHHHHHHHhh
Q 011801 386 NVSPGSSFQCTEPGWFRVCFANM-DDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 386 ~v~pg~~f~~~~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~~ 426 (477)
.+.+|.. ..+.+|+|+... +.++++.+++.|++++.+
T Consensus 321 ~~~~~~~----~~g~vRiS~~~~nt~eei~~l~~~l~~~~~~ 358 (360)
T PRK05355 321 VGLKGHR----SVGGMRASIYNAMPLEGVQALVDFMKEFERR 358 (360)
T ss_pred cccCCCC----ccCcEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 8866642 247899999775 899999999999998875
No 303
>PRK07678 aminotransferase; Validated
Probab=99.58 E-value=3.4e-12 Score=132.43 Aligned_cols=295 Identities=12% Similarity=0.113 Sum_probs=163.5
Q ss_pred CcEEEeCChHHHHHHHHHHhc-------CCC-CeEEEcCCCccchHHHHhhhCCc------------EEEEEeccCCCCc
Q 011801 112 DRIVMGGGATGANELIMFCLA-------NPG-DAFLVPSPYYAAFDRDLSWRTGV------------QIVPVHCDISNNF 171 (477)
Q Consensus 112 ~~i~~t~G~t~al~~i~~~l~-------~~G-d~vlv~~P~y~~~~~~~~~~~g~------------~~~~v~~~~~~~f 171 (477)
+.+++++++++|++.+++.-. .+| .+|+...-+|++....+-..+|. .+..++.. +.+
T Consensus 106 ~~v~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 183 (451)
T PRK07678 106 YVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPP--DCY 183 (451)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCC--ccc
Confidence 589999999999999887642 123 57888888888765332211121 11222211 111
Q ss_pred cc---------C---HHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccC-CCHHHHHHHHHHHHhcCeEEEeccccccccc
Q 011801 172 KI---------T---REALEAAYERAQEASINIKGLIITNPSNPLGTT-LDRDTLKSLVSFINDKNIHLVCDEIYAATVF 238 (477)
Q Consensus 172 ~i---------~---~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~-~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~ 238 (477)
.. + .+.+++.++. ....++.+||+.--..-.|.+ .+.+-+++|.++|++||+++|.||+..++..
T Consensus 184 ~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGR 261 (451)
T PRK07678 184 RMPGIESEDIYDLECVKEIDRVMTW--ELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGR 261 (451)
T ss_pred cccccCChHHHHHHHHHHHHHHHHh--cCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCc
Confidence 11 1 1223444432 123467776665334445655 5677799999999999999999999987533
Q ss_pred CCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCC-ceEEEEEeCCHHHHHHHHH---------hcccCCCchHHHHHH
Q 011801 239 SSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPG-FRVGIVYSFNDTVVNCGRK---------MSSFGLVSSQTQYLL 308 (477)
Q Consensus 239 ~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G-~RvG~i~~~~~~i~~~~~~---------~~~~~~vs~~~q~~~ 308 (477)
.+.. ..... .+..+| ++ +++|.+| .| +.+|.+++.++ +.+.+.. ..+|+ .++.+..++
T Consensus 262 tG~~-~~~~~----~gv~PD--iv--t~gK~lg-gG~~Pi~av~~~~~-i~~~~~~~~~~~~~~h~~T~~-gnp~~~aaa 329 (451)
T PRK07678 262 TGKA-FGFMN----YGVKPD--II--TMAKGIT-SAYLPLSATAVKKE-IYEAFKGKGEYEHFRHVNTFG-GNPAACALA 329 (451)
T ss_pred Cchh-HHHHh----cCCCCC--EE--Eeecccc-cCCcceeEEEEcHH-HHHHHhccCcccccccCCCCC-cCHHHHHHH
Confidence 3322 12111 122344 22 7799998 77 69999999655 4443321 11222 455555555
Q ss_pred HHhcC---ChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchhhcc---CchHHHHHHHHHHHh
Q 011801 309 ASMLS---DDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEK---TLEGEIALWRTIVND 382 (477)
Q Consensus 309 ~~~L~---~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~~---~~~~e~~l~~~ll~~ 382 (477)
.+.|+ +.++ -+...+.-++++ +.|.+.++++++......-|+++-+.+....... .......++..+++
T Consensus 330 ~a~l~~l~~~~~-~~~~~~~g~~l~---~~l~~~~~~~~~v~~vrg~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~~- 404 (451)
T PRK07678 330 LKNLEIMENENL-IERSAQLGELLL---EQLKEELGEHPLVGDIRGKGLLVGIELVNDKETKEPADNDKVASVVAACKE- 404 (451)
T ss_pred HHHHHHHHhCCH-HHHHHHHHHHHH---HHHHHHHhcCCCEEEEEeeceEEEEEEecCCcccCcCchHHHHHHHHHHHH-
Confidence 55554 2222 111222222222 2232333344432223345677777774311110 00112245555554
Q ss_pred cCeEEeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHhhh
Q 011801 383 VKLNVSPGSSFQCTEPGWFRVCFAN-MDDDTLQVALNRIAAFVQQD 427 (477)
Q Consensus 383 ~gI~v~pg~~f~~~~~~~~Rl~~~~-~~~e~l~~~l~~l~~~~~~~ 427 (477)
.||.+.+.....+.....+|++... +++++++++++++.+++++.
T Consensus 405 ~Gv~~~~~g~~v~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 405 KGLIIGKNGDTVAGYNNVLTLSPPLVISSEEIAFIVGTLKTALERI 450 (451)
T ss_pred CCcEEeecCccccCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence 5999976422111223579999875 49999999999999998753
No 304
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.57 E-value=4.8e-12 Score=118.59 Aligned_cols=283 Identities=16% Similarity=0.198 Sum_probs=194.8
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCC-ccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhC
Q 011801 111 PDRIVMGGGATGANELIMFCLANPGDAFLVPSPY-YAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEAS 189 (477)
Q Consensus 111 ~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~-y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~ 189 (477)
+--.++...++.+++.++..++.|||.|++..-. |..-..++..+.|+++..++.+. +-.++++.+.+++.++
T Consensus 68 ~~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~~~--G~~~~le~i~~~lsqh---- 141 (385)
T KOG2862|consen 68 AQTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGTWGQRAADCARRYGAEVDVVEADI--GQAVPLEEITEKLSQH---- 141 (385)
T ss_pred CceEEEecCCcchHHHHHHhhcCCCCeEEEEEechHHHHHHHHHHhhCceeeEEecCc--ccCccHHHHHHHHHhc----
Confidence 3456777778999999999999999999987654 65444444445599999998664 4468899999999875
Q ss_pred CCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcc
Q 011801 190 INIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKD 269 (477)
Q Consensus 190 ~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~ 269 (477)
++++|++++-...||.+-+. +..+-++|++|+.++++|.+-+ .++.+|. .+ .++..+....--|+
T Consensus 142 -~p~~vfv~hgdsSTgV~q~~--~~~~g~lc~k~~~lllVD~VaS---lggt~F~-----mD----ewgVDvaytgSQKa 206 (385)
T KOG2862|consen 142 -KPKAVFVTHGDSSTGVLQDL--LAISGELCHKHEALLLVDTVAS---LGGTEFE-----MD----EWGVDVAYTGSQKA 206 (385)
T ss_pred -CCceEEEEecCccccccchH--HHHHHHHhhcCCeEEEEechhh---cCCccce-----eh----hhcccEEEecchhh
Confidence 89999999988899998773 4556678889999999999987 5666553 12 23333333333599
Q ss_pred cCCCCceEEEEEeCCHHHHHHHHHhc--------------cc-----------CCCchHHHHHHHHhcCChhhHHHHHHH
Q 011801 270 MGLPGFRVGIVYSFNDTVVNCGRKMS--------------SF-----------GLVSSQTQYLLASMLSDDEFVDNFLVE 324 (477)
Q Consensus 270 ~g~~G~RvG~i~~~~~~i~~~~~~~~--------------~~-----------~~vs~~~q~~~~~~L~~~~~~~~~~~~ 324 (477)
+|.|. .++.|..++..... ++... .| .+.+.+.-+.+.++|..- .++-+++
T Consensus 207 L~aP~-GLsiisfS~ka~~~-~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I--~eeGL~~ 282 (385)
T KOG2862|consen 207 LGAPA-GLSIISFSDKALEA-IRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALI--AEEGLEN 282 (385)
T ss_pred cCCCC-CcceeecCHHHHHH-HhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHH--HHHHHHH
Confidence 99542 35555555544333 22211 11 234556667777777542 2566788
Q ss_pred HHHHHHHHHHHHHHHHhhCCCeEecCCc----eEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCE
Q 011801 325 TSKRLAKRHHNFTKGLEQVGINCLKSNA----GLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGW 400 (477)
Q Consensus 325 ~~~~l~~r~~~l~~~L~~~gi~~~~~~~----g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~ 400 (477)
..++.++..+++...|+++|++...... .-.-.+.+|...+.. +....+..+.++.+.-| -++..+..
T Consensus 283 ~~~rH~e~s~~l~~~l~~~GLq~fv~~e~~rlptvttv~vp~gvDw~------dVv~~~~~~~~vei~gg--lg~~~gKv 354 (385)
T KOG2862|consen 283 SWRRHREMSKWLKLSLEALGLQLFVVDEELRLPTVTTVKVPYGVDWK------DVVAYAMSHYVVEIGGG--LGPTVGKV 354 (385)
T ss_pred HHHHHHHHHHHHHHHHHHhCccceecChhhccCcceeeecCCCCCHH------HHHHHHHHhcCEEeccc--cCCCcccE
Confidence 8888999999999999999876432111 012245556544432 46677777767766544 45556779
Q ss_pred EEEEecc--CCHHHHHHHHHHHHHHHhh
Q 011801 401 FRVCFAN--MDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 401 ~Rl~~~~--~~~e~l~~~l~~l~~~~~~ 426 (477)
|||++-. .+.|.++..++.|+..+++
T Consensus 355 ~RIGl~gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862|consen 355 FRIGLLGCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred EEEEEeeccCCcHHHHHHHHHHHHHHhh
Confidence 9998833 3789999999999988876
No 305
>PLN02263 serine decarboxylase
Probab=99.57 E-value=3.1e-12 Score=130.75 Aligned_cols=292 Identities=10% Similarity=0.055 Sum_probs=194.0
Q ss_pred CcHHHHHHHHHHHhcccCCCCccCCC--cEEEeCChHHHHHHHHHHhcC--CCCeEEEcCCCccchHHHHhhhCCcEEEE
Q 011801 87 GLPEFRQAVAKFMGKGRGGRVTFDPD--RIVMGGGATGANELIMFCLAN--PGDAFLVPSPYYAAFDRDLSWRTGVQIVP 162 (477)
Q Consensus 87 G~~~lr~aia~~~~~~~g~~~~~~~~--~i~~t~G~t~al~~i~~~l~~--~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~ 162 (477)
+..++.+.+-+|+.+..| ++++ .-++|+|+|+++..++.+-.+ +...++++.-++..+.+++... |++++.
T Consensus 130 ~s~~~E~~Vi~wla~L~g----~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~ll-gi~~~~ 204 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWE----IEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMY-RMECVK 204 (470)
T ss_pred hHHHHHHHHHHHHHHHhC----CCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhc-CCcceE
Confidence 468999999999998877 3343 368899999999988877533 3347888888999999999887 999999
Q ss_pred EeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCe-----EEEecccccccc
Q 011801 163 VHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNI-----HLVCDEIYAATV 237 (477)
Q Consensus 163 v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~-----~lI~De~y~~~~ 237 (477)
||++ .++++|+++|++++++. ..++-+|+.+-++.++|.+=+ +++|.++|+++|+ |+.+|.+|++++
T Consensus 205 Vp~d--~~g~mD~~aL~~aI~~d---~~~P~iVvataGTT~~GAiDp---i~eIa~i~~~~g~~~~~iwlHVDAA~GG~~ 276 (470)
T PLN02263 205 VDTL--VSGEIDCADFKAKLLAN---KDKPAIINVNIGTTVKGAVDD---LDLVIKTLEECGFSQDRFYIHCDGALFGLM 276 (470)
T ss_pred eccC--CCCcCcHHHHHHHHHhC---CCCcEEEEEEecCCCCcCCCC---HHHHHHHHHHcCCccCCeeEEEeccchhhH
Confidence 9986 46799999999998752 123555666778899999988 7888888888886 999999998864
Q ss_pred cCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhccc------C-CCc-----hHHH
Q 011801 238 FSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSF------G-LVS-----SQTQ 305 (477)
Q Consensus 238 ~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~~~------~-~vs-----~~~q 305 (477)
............ .....-+.-+.+|.++ ..+.+|.++..++.+ ..+.....| . ..| .+..
T Consensus 277 lPf~~~~~~~df------~~~vDSIsvD~HK~l~-~P~~cgvll~R~~~~-~~~~~~~~Yl~~~d~ti~gSR~g~~al~l 348 (470)
T PLN02263 277 MPFVKRAPKVTF------KKPIGSVSVSGHKFVG-CPMPCGVQITRMEHI-NVLSSNVEYLASRDATIMGSRNGHAPIFL 348 (470)
T ss_pred hhhcccccccCC------CcCccEEEECCccccC-CCcCEEEEEEehhhH-hhhccChHhhCCCCCCcCCCCCcHHHHHH
Confidence 311000000111 1123344569999887 778999999876543 222111111 1 011 2223
Q ss_pred HHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCe
Q 011801 306 YLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKL 385 (477)
Q Consensus 306 ~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI 385 (477)
++....+.... +++..++..+..+++.+.|++.|+........+.+.+.-+. .+ . . ..|.
T Consensus 349 W~~L~~~G~~G-----~~~~i~~~~~~A~~l~~~l~~~g~~~~~~p~s~~V~f~~p~--------~~--~----~-~~gW 408 (470)
T PLN02263 349 WYTLNRKGYRG-----FQKEVQKCLRNAHYLKDRLREAGISAMLNELSSTVVFERPK--------DE--E----F-VRRW 408 (470)
T ss_pred HHHHHHhCHHH-----HHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCceEEEEecCc--------hH--H----h-hcce
Confidence 33333333322 35555666677788999999888875543333455554331 00 0 1 2366
Q ss_pred EEeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHhh
Q 011801 386 NVSPGSSFQCTEPGWFRVCFAN-MDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 386 ~v~pg~~f~~~~~~~~Rl~~~~-~~~e~l~~~l~~l~~~~~~ 426 (477)
.+.+ .++.+++++.. .+.+.++++++.|++....
T Consensus 409 ~L~~-------~~~~~Hivvmphv~~~~id~fi~DL~~~~~~ 443 (470)
T PLN02263 409 QLAC-------QGNIAHVVVMPSVTIEKLDYFLKELVEKRST 443 (470)
T ss_pred EEcc-------CCCcEEEEEcCCCCHHHHHHHHHHHHHHHhh
Confidence 5543 13469999965 4889999999998887653
No 306
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.57 E-value=2.2e-12 Score=127.27 Aligned_cols=188 Identities=18% Similarity=0.177 Sum_probs=135.1
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhh---hCCcEEEEEe
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSW---RTGVQIVPVH 164 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~---~~g~~~~~v~ 164 (477)
...+.+.+++..+ ....++++++..|+..++..|+.+|+.|+..+..|.+..+.++. ..|++...++
T Consensus 79 ~~~le~~iaal~g----------a~~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd 148 (409)
T KOG0053|consen 79 RDVLESGIAALEG----------AAHALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVD 148 (409)
T ss_pred hHHHHHHHHHHhC----------CceEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeec
Confidence 4667777777664 34588888889999999999999999999999999987765543 2477777666
Q ss_pred ccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcc
Q 011801 165 CDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFT 244 (477)
Q Consensus 165 ~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~ 244 (477)
++ +++.+++++++ ++++|++..|+||+..+.+ +++|.++|+++|++||+|+.++..++..+
T Consensus 149 ~~-------~~~~~~~~i~~------~t~~V~~ESPsNPll~v~D---I~~l~~la~~~g~~vvVDnTf~~p~~~~p--- 209 (409)
T KOG0053|consen 149 VD-------DLKKILKAIKE------NTKAVFLESPSNPLLKVPD---IEKLARLAHKYGFLVVVDNTFGSPYNQDP--- 209 (409)
T ss_pred hh-------hHHHHHHhhcc------CceEEEEECCCCCcccccc---HHHHHHHHhhCCCEEEEeCCcCcccccCh---
Confidence 54 46777777764 7999999999999999999 77888888899999999999875433221
Q ss_pred cHHHhhhhccCCCCcEEEEecCCcccCC-CCceEEEEEeCCHHHHHHHHHhc--ccCCCchHHHHHHHHhcCC
Q 011801 245 SVAEVIQEMDCNRDLIHIIYSLSKDMGL-PGFRVGIVYSFNDTVVNCGRKMS--SFGLVSSQTQYLLASMLSD 314 (477)
Q Consensus 245 s~~~~~~~~~~~~~~viiv~SlSK~~g~-~G~RvG~i~~~~~~i~~~~~~~~--~~~~vs~~~q~~~~~~L~~ 314 (477)
. ..+..|+++|.+|.+|= ..+=.|.++.+...+...++... -.+..+++..+.+.+-+..
T Consensus 210 --L--------~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~~lg~~~~p~~~~ll~Rglkt 272 (409)
T KOG0053|consen 210 --L--------PLGADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQEDLGWCEDPFDLFLLSRGLKT 272 (409)
T ss_pred --h--------hcCCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHHHHhcCCCCHHHHHHHhcCcch
Confidence 1 22456899999999962 22445667775455555444332 2234566655555444444
No 307
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.57 E-value=8.5e-13 Score=127.16 Aligned_cols=301 Identities=14% Similarity=0.136 Sum_probs=194.7
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcC--CCCeEEEcCCCccchHHHHhhhCCcEEEEEec
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLAN--PGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHC 165 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~--~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~ 165 (477)
..+|.+.+|+.+++ +.-++.++.--|++..++.|.+ ||=.|.-..-.+......++.. ++.-+.+.-
T Consensus 218 hv~LE~eLA~LHqK----------~aALlFsSCfVANDstLftLak~lpgcei~SD~gNHASMI~GIrns-~v~K~IFrH 286 (570)
T KOG1360|consen 218 HVRLEAELADLHQK----------EAALLFSSCFVANDSTLFTLAKKLPGCEIFSDEGNHASMIQGIRNS-RVPKHIFRH 286 (570)
T ss_pred hhhHHHHHHHHhcC----------cceeeeeeeeeccchHHHHHHHHCCCcEEeccccchHHHHHHhhhc-CCcceeecc
Confidence 36788888888763 4445555555566666655533 6766666666676666667655 655433331
Q ss_pred cCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCccc
Q 011801 166 DISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTS 245 (477)
Q Consensus 166 ~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s 245 (477)
+ |++.|++.+++..+. .+|.|-+..-+.-+|.+.+ |++|++++.+||.+-.+||+++-..|+... ..
T Consensus 287 ---N----D~~hL~~lL~~~~~s--vPKivAFEtVhSM~Gavcp---leelcDvah~yGAiTFlDEVHAVGlYG~rG-aG 353 (570)
T KOG1360|consen 287 ---N----DLDHLEQLLQSSPKS--VPKIVAFETVHSMDGAVCP---LEELCDVAHKYGAITFLDEVHAVGLYGPRG-AG 353 (570)
T ss_pred ---C----CHHHHHHHHHhCCCC--CCceEEEeeeeccCCCcCC---HHHHHHHHHHhCceeeeehhhhhccccCCC-CC
Confidence 1 789999998865333 5688888888999999999 888999999999999999999865565432 33
Q ss_pred HHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHh-cccCCCchHHHHHHHHhcCChhhHHHH-HH
Q 011801 246 VAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKM-SSFGLVSSQTQYLLASMLSDDEFVDNF-LV 323 (477)
Q Consensus 246 ~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~-~~~~~vs~~~q~~~~~~L~~~~~~~~~-~~ 323 (477)
+.+- .|......|+.+++.|+||+-| |||.+..+ +++..+.+ ..|....++....++.+|+.-.++... =+
T Consensus 354 vger---dGvm~kvDiIsGTLgKafGcVG---GYIAat~~-LvDmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~ 426 (570)
T KOG1360|consen 354 VGER---DGVMHKVDIISGTLGKAFGCVG---GYIAATRK-LVDMIRSYAAGFIFTTSLPPMVLAGALEAVRILKSEEGR 426 (570)
T ss_pred cccc---CCcchhhhhcccchhhhccccc---ceehhhhh-HHHHHHHhcCceEEecCCChHHHHhHHHHHHHHhhhhhH
Confidence 2221 1112344578899999999998 99998554 45555544 333222222222223333322221100 02
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCC--CCCCEE
Q 011801 324 ETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQC--TEPGWF 401 (477)
Q Consensus 324 ~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~--~~~~~~ 401 (477)
..++..++.-.++.+.|.+.|+++.+.... .+-+.+.+.... .+.+..|+.++||.|..- .|.- .+...+
T Consensus 427 ~lR~~hqrnv~~~kq~l~~~GiPVi~~pSH-IiPv~vgda~l~------~~~sd~Li~~h~iYvQaI-NyPTV~rG~E~L 498 (570)
T KOG1360|consen 427 VLRRQHQRNVKYVKQLLMELGIPVIPNPSH-IIPVRVGDAALA------KQASDILISKHNIYVQAI-NYPTVARGTERL 498 (570)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCcccCCCcc-eeeeeccCHHHH------HHHHHHHHHhcCeEEEec-cCCcccccceee
Confidence 233444556678888999999999876653 555555532221 256788999999999654 3432 344578
Q ss_pred EEEecc-CCHHHHHHHHHHHHHHHhhh
Q 011801 402 RVCFAN-MDDDTLQVALNRIAAFVQQD 427 (477)
Q Consensus 402 Rl~~~~-~~~e~l~~~l~~l~~~~~~~ 427 (477)
||...- .+++.++.+++.+..++.+.
T Consensus 499 RiaPTP~HT~~mm~~lv~~l~~vw~~v 525 (570)
T KOG1360|consen 499 RIAPTPHHTPQMMNILVNALLDVWNEV 525 (570)
T ss_pred ecCCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 887743 38899999999999988753
No 308
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.56 E-value=7e-14 Score=140.62 Aligned_cols=187 Identities=22% Similarity=0.337 Sum_probs=126.9
Q ss_pred ccccCCCCC-cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCC
Q 011801 79 IAIFQDYHG-LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTG 157 (477)
Q Consensus 79 ~~~Y~~~~G-~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g 157 (477)
+.+...+.| ..+..+.+|+.++- ....++++|+|.++.+++.+++.|||.||++.-++-.....+.+. |
T Consensus 58 lD~L~~p~G~I~eAe~~aA~~fGA---------d~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~alil~-g 127 (417)
T PF01276_consen 58 LDDLHDPEGIIKEAEELAARAFGA---------DKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALILS-G 127 (417)
T ss_dssp CBBTTTTBTHHHHHHHHHHHHHTE---------SEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHHHH-T
T ss_pred cCcccCCccHHHHHHHHHHHhcCC---------CeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHc-C
Confidence 333333444 66777888888872 346888999999999999999999999999999999998888887 9
Q ss_pred cEEEEEeccCCCCc----ccCH-----HHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEE
Q 011801 158 VQIVPVHCDISNNF----KITR-----EALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLV 228 (477)
Q Consensus 158 ~~~~~v~~~~~~~f----~i~~-----~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI 228 (477)
++++.++.. .+.+ .+++ +.+++++++..... .+++|++++| +-.|.+.+ +++|+++|+++++.|+
T Consensus 128 a~Pvyi~p~-~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k-~~~~vvlt~P-TY~Gv~~d---i~~I~~~~h~~~~~ll 201 (417)
T PF01276_consen 128 AIPVYIPPE-DNEYGIIGGISPDEFNEEDIEEALKEHPDAK-APRLVVLTSP-TYYGVCYD---IKEIAEICHKHGIPLL 201 (417)
T ss_dssp EEEEEEEEE-E-TTS-BEEB-GGGGSHHHHHHHHHHCTTCH-CESEEEEESS--TTSEEE----HHHHHHHHCCTECEEE
T ss_pred CeEEEecCC-ccccCCccCCChhhhhHHHHHHHHHhCcccc-CceEEEEeCC-CCCeEEEC---HHHHHHHhcccCCEEE
Confidence 999888765 3333 3455 88888887642211 1455999998 56899999 8999999999999999
Q ss_pred eccccccc-ccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCce-EEEEEeCCH
Q 011801 229 CDEIYAAT-VFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFR-VGIVYSFND 285 (477)
Q Consensus 229 ~De~y~~~-~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~R-vG~i~~~~~ 285 (477)
+||+|.+. .|. +-+.+....-.+ +.....++++.|.+|.+ |++. .++|....+
T Consensus 202 vDEAhGah~~F~-~lp~~a~~~gad-~~~~~~~~vvqS~HKtL--~altQts~lh~~~~ 256 (417)
T PF01276_consen 202 VDEAHGAHFGFH-PLPRSALALGAD-RPNDPGIIVVQSTHKTL--PALTQTSMLHVKGD 256 (417)
T ss_dssp EE-TT-TTGGCS-GGGTTCSSTTSS--CTSBEEEEEEEHHHHS--SS-TT-EEEEEETC
T ss_pred EEccccccccCC-CCccchhhccCc-cccccceeeeechhhcc--cccccceEEEecCC
Confidence 99999864 233 111111111010 11234678899999998 5665 456665544
No 309
>PRK05965 hypothetical protein; Provisional
Probab=99.56 E-value=5.9e-12 Score=130.84 Aligned_cols=305 Identities=14% Similarity=0.105 Sum_probs=171.0
Q ss_pred HHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhc------C-CC-CeEEEcCCCccchHHHHhhhCC----
Q 011801 90 EFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLA------N-PG-DAFLVPSPYYAAFDRDLSWRTG---- 157 (477)
Q Consensus 90 ~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~------~-~G-d~vlv~~P~y~~~~~~~~~~~g---- 157 (477)
+.+..+|+.+.+... -+.+++++++++++|++.+++... + ++ .+|+...-+|++........++
T Consensus 90 ~~~~~lae~L~~~~p----~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~ 165 (459)
T PRK05965 90 EPAIRLAAKLAERAP----GSLNHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAF 165 (459)
T ss_pred HHHHHHHHHHHhhCC----CCcCEEEEeCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchh
Confidence 344455555543321 124689999999999999987632 1 22 5788889899886432111111
Q ss_pred ----------cEEEEEeccCCCCcccCH--------HHHHHHHHHHHHhCCCeeEEEEeCCCCCcccC-CCHHHHHHHHH
Q 011801 158 ----------VQIVPVHCDISNNFKITR--------EALEAAYERAQEASINIKGLIITNPSNPLGTT-LDRDTLKSLVS 218 (477)
Q Consensus 158 ----------~~~~~v~~~~~~~f~i~~--------~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~-~~~~~l~~l~~ 218 (477)
...++.+......+.-+. +++++.++.. ...++.+||+.--....|.+ .+.+-+++|.+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~ 243 (459)
T PRK05965 166 HRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAEL--GADNVAAFFCEPIQGSGGVIVPPKGWLKAMRE 243 (459)
T ss_pred hcccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEeccccCCCCccCCHHHHHHHHH
Confidence 111111211000111122 4555555431 11367777776445556764 57778999999
Q ss_pred HHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCC-ceEEEEEeCCHHHHHHHHH----
Q 011801 219 FINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPG-FRVGIVYSFNDTVVNCGRK---- 293 (477)
Q Consensus 219 ~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G-~RvG~i~~~~~~i~~~~~~---- 293 (477)
+|++||+++|.||+..++.-.+..+. . +. .+..+| ++ +++|.+| .| +.+|.+++.++. .+....
T Consensus 244 lc~~~gillI~DEV~tGfGRtG~~~a-~-~~---~gv~PD--iv--~~gKgl~-gG~~Pi~av~~~~~i-~~~~~~~~~~ 312 (459)
T PRK05965 244 ACRELGILFVADEVITGFGRTGPLFA-C-EA---EGVVPD--LM--TVAKGLT-SGYVPMGAVLMSDHV-YQGIADGAGA 312 (459)
T ss_pred HHHHcCCEEEEechhccCccCchhhh-H-hh---cCCCCC--eE--Eechhhc-cCCcceeEEEEcHHH-HHHHhccccc
Confidence 99999999999999988543443221 1 11 122333 33 6789998 89 499999996554 333321
Q ss_pred -----h-cccCCCchHHHHHHHHhcC---ChhhHHHHHHHHHHHHHHHHHHHHHHHhh---CCCeEecCCceEEEEeecc
Q 011801 294 -----M-SSFGLVSSQTQYLLASMLS---DDEFVDNFLVETSKRLAKRHHNFTKGLEQ---VGINCLKSNAGLFFWMDLR 361 (477)
Q Consensus 294 -----~-~~~~~vs~~~q~~~~~~L~---~~~~~~~~~~~~~~~l~~r~~~l~~~L~~---~gi~~~~~~~g~~~~~~l~ 361 (477)
. .+|+ .++++..++.+.|+ +.++ .++.++.-++|.+.|++ .++-..-..-|+++-+++.
T Consensus 313 ~~~~~h~~T~~-gnpl~~Aaa~a~L~~l~~~~l--------~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~gie~~ 383 (459)
T PRK05965 313 AAPVGHGYTYS-AHPVSAAVGLEVLRLYHEGGL--------LANGQKAGPRFAAGLDALRAHPLVGDVRGRGLLGALELV 383 (459)
T ss_pred cccccccCCCC-CCHHHHHHHHHHHHHHHhccH--------HHHHHHHHHHHHHHHHhhccCCCEEEEeecceEEEEEEe
Confidence 1 1222 45555555555443 3332 12222333334444433 2321122345677777775
Q ss_pred chhhccCc-h----HHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccC-CHHHHHHHHHHHHHHHhhh
Q 011801 362 HLLKEKTL-E----GEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANM-DDDTLQVALNRIAAFVQQD 427 (477)
Q Consensus 362 ~~~~~~~~-~----~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~~~ 427 (477)
........ + ....++..++ ++||++.+. +...+|++.... +++++++++++|.+++++.
T Consensus 384 ~~~~~~~~~~~~~~~~~~i~~~~~-~~Gll~~~~------g~~~i~~~PpL~it~~ei~~~~~~l~~~l~~~ 448 (459)
T PRK05965 384 ADKATKTPFDAALDPADRIFDRAY-ANGLVFRAF------GDGVLGFAPALCCTEGEFDLIFERTRKTLDDV 448 (459)
T ss_pred ccccccCCCCchhHHHHHHHHHHH-hCCeEEEec------CCcEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 32111110 1 1123445555 569999753 245689887653 9999999999999999764
No 310
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.55 E-value=1.2e-12 Score=132.23 Aligned_cols=282 Identities=12% Similarity=0.125 Sum_probs=169.1
Q ss_pred cHHHHHHHHHHHhcccCCCCccC-CCcEEEe-CChHHHHHHHHHHhcCCCCeEEEcCCCccc-hHHHHh---hhCCcEEE
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFD-PDRIVMG-GGATGANELIMFCLANPGDAFLVPSPYYAA-FDRDLS---WRTGVQIV 161 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~-~~~i~~t-~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~-~~~~~~---~~~g~~~~ 161 (477)
+.+.|+.++++++ .+ +.+|+++ +++|.+++.++..+..+ +.+++..-.|.. +...+. |. + ++.
T Consensus 43 ~~~~r~~l~~l~~--------~~~~~~v~f~~gs~T~a~~~~~~~l~~~-~~l~i~~G~~~~~~~~~a~~~~~~-~-~~~ 111 (361)
T TIGR01366 43 VGRVREGLAELFS--------LPDGYEVILGNGGATAFWDAATFGLIEK-KSLHLSFGEFSSKFAKAVKLAPWL-G-EPI 111 (361)
T ss_pred HHHHHHHHHHHhC--------CCCCceEEEECCchhHHHHHHHHhcccc-cccEEecCHHHHHHHHHHHhhhcc-C-Cce
Confidence 4677888888876 32 3478886 55999999999998643 333343333432 222222 22 3 455
Q ss_pred EEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCC
Q 011801 162 PVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSP 241 (477)
Q Consensus 162 ~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~ 241 (477)
.++++... .++. .+ +.++++|.+++.+|.||...+.++ | ++++|+++|+|.+.+ +...
T Consensus 112 ~~~~~~~~--~~~~-----~~------~~~~~lV~~~h~et~tG~~~pi~~---I---~~~~g~~~iVDavqs---~g~~ 169 (361)
T TIGR01366 112 IVTADPGS--APEP-----QA------DPGVDVIAWAHNETSTGVAVPVRR---P---EGSDDALVVIDATSG---AGGL 169 (361)
T ss_pred EEecCCCC--CCCC-----cc------CCCCCEEEEcccCCccceeccccc---c---cccCCCeEEEEcCcc---ccCC
Confidence 55554321 2222 11 348999999999999999999544 4 478999999999997 4443
Q ss_pred CcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHh----------------------cccCC
Q 011801 242 KFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKM----------------------SSFGL 299 (477)
Q Consensus 242 ~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~----------------------~~~~~ 299 (477)
+ ..+.. ..+++.|..|.+|.||- +++++.+++.+....... ..+++
T Consensus 170 ~-idv~~----------~D~~~~s~~K~lg~~~G-l~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~t 237 (361)
T TIGR01366 170 P-VDIAE----------TDVYYFAPQKNFASDGG-LWLAIMSPAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNT 237 (361)
T ss_pred C-CCHHH----------CCEEEEEchhhcCCCCc-eEEEEECHHHHhhhhcccCCCCCCchhhhHHHHHhccccCCCCCC
Confidence 3 33332 23678899999997752 666666665543321100 01122
Q ss_pred CchHHHHHHHHhcCChhhHHH--HHHHHHHHHHHHHHHHHHHHhhCC-CeEecC-C---ceEEEEeeccchhhccCchHH
Q 011801 300 VSSQTQYLLASMLSDDEFVDN--FLVETSKRLAKRHHNFTKGLEQVG-INCLKS-N---AGLFFWMDLRHLLKEKTLEGE 372 (477)
Q Consensus 300 vs~~~q~~~~~~L~~~~~~~~--~~~~~~~~l~~r~~~l~~~L~~~g-i~~~~~-~---~g~~~~~~l~~~~~~~~~~~e 372 (477)
.+...-+++.++++. +.+ -++...++.++..+.+.+.|.+.+ ++.+.. . ......+.++...+.
T Consensus 238 p~i~~i~~l~~al~~---l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~~~g~~~------ 308 (361)
T TIGR01366 238 PAIATLALLAEQIDW---MNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDFVDDIDA------ 308 (361)
T ss_pred chHHHHHHHHHHHHH---HHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEECCCccCH------
Confidence 222222233333321 111 145556777888888999998886 444421 1 111122333332221
Q ss_pred HHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccC-CHHHHHHHHHHHHHHHhh
Q 011801 373 IALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANM-DDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 373 ~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~~ 426 (477)
.++...+ +++||.+.+|. +..+++.||+++... ++++++.+++.|++++++
T Consensus 309 ~~v~~~L-~~~gI~i~~~~--~~l~~~~vRis~~~~~t~~di~~l~~al~~~~~~ 360 (361)
T TIGR01366 309 ATVAKIL-RANGIVDTEPY--RKLGRNQLRVAMFPAIDPDDVEALTECVDWVVER 360 (361)
T ss_pred HHHHHHH-HHCCCeeccCc--cccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhh
Confidence 1344444 66799998763 223457899999775 999999999999998765
No 311
>PRK04311 selenocysteine synthase; Provisional
Probab=99.55 E-value=7.4e-12 Score=129.32 Aligned_cols=291 Identities=15% Similarity=0.162 Sum_probs=174.3
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccc------hHHHHhhhCCcEEE
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAA------FDRDLSWRTGVQIV 161 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~------~~~~~~~~~g~~~~ 161 (477)
+..+++.+|++.+ .+..+++++++.|+.+++.++ .+||.|++++..+.. +...++.. |++++
T Consensus 129 ~~~~e~~lA~l~G----------ae~a~vv~sgtaAl~l~l~~l-~~GdeVIvs~~e~~~~ggs~~i~~~~~~~-G~~l~ 196 (464)
T PRK04311 129 DRALAALLCALTG----------AEDALVVNNNAAAVLLALNAL-AAGKEVIVSRGELVEIGGAFRIPDVMRQA-GARLV 196 (464)
T ss_pred HHHHHHHHHHHhC----------CCeEEEECCHHHHHHHHHHHh-CCCCEEEEcchhhhhcCcchhhHHHHHHC-CcEEE
Confidence 3688888888876 345778888889999888665 789999998764331 12234444 99998
Q ss_pred EEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCC--cc--cCCCHHHHHHHHHHHHhcCeEEEeccccccc-
Q 011801 162 PVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNP--LG--TTLDRDTLKSLVSFINDKNIHLVCDEIYAAT- 236 (477)
Q Consensus 162 ~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NP--tG--~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~- 236 (477)
.++.+. ..+++++++++.+ ++++|++.+++|| +| ...+ +++|+++|+++|+++|+|...+.+
T Consensus 197 ~v~~~~----~t~~~dle~aI~~------~TklV~~vh~sN~~i~G~~~~~d---l~eI~~lak~~gi~vivD~gsG~l~ 263 (464)
T PRK04311 197 EVGTTN----RTHLRDYEQAINE------NTALLLKVHTSNYRIEGFTKEVS---LAELAALGKEHGLPVVYDLGSGSLV 263 (464)
T ss_pred EECCCC----CCCHHHHHHhcCc------cCeEEEEEcCCCccccccCCcCC---HHHHHHHHHHcCCeEEEECCCcccc
Confidence 887542 2468889888864 7899999999999 35 4556 889999999999999999964321
Q ss_pred ---ccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHh---cccCCCchHHHH----
Q 011801 237 ---VFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKM---SSFGLVSSQTQY---- 306 (477)
Q Consensus 237 ---~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~---~~~~~vs~~~q~---- 306 (477)
.|.-+....+...+ ..+..++++|.+|.+|-| ..|++++.++.+ +.+++. +.. -+...+..
T Consensus 264 ~~~~~gl~~~p~~~~~l-----~~GaDiv~fSg~K~LgGp--~~G~i~g~~~li-~~l~~~~~~r~l-r~dk~~l~~l~~ 334 (464)
T PRK04311 264 DLSQYGLPDEPTVQELL-----AAGVDLVTFSGDKLLGGP--QAGIIVGKKELI-ARLKKHPLKRAL-RVDKLTLAALEA 334 (464)
T ss_pred cchhccCCCCCchhhHH-----hcCCcEEEecCcccccCC--ceEEEEEcHHHH-HHHhhchhHHHH-hcchHHHHHHHH
Confidence 01101111222222 235568899999998633 589999965544 333311 111 12222222
Q ss_pred HHHHhcCChh-hH----HHHHHHHHHHHHHHHHHHHHHHhhCC---C--eEecC----CceEE-------EEeeccchhh
Q 011801 307 LLASMLSDDE-FV----DNFLVETSKRLAKRHHNFTKGLEQVG---I--NCLKS----NAGLF-------FWMDLRHLLK 365 (477)
Q Consensus 307 ~~~~~L~~~~-~~----~~~~~~~~~~l~~r~~~l~~~L~~~g---i--~~~~~----~~g~~-------~~~~l~~~~~ 365 (477)
.+..++...+ +. -+.+....+++.++.+.+.+.|+... + ++.+. .+|-. .-+.+...
T Consensus 335 ~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~~~-- 412 (464)
T PRK04311 335 TLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTLTPK-- 412 (464)
T ss_pred HHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEEeCC--
Confidence 2233332211 10 11233334667777888888887652 2 33322 11111 11122110
Q ss_pred ccCchHHHHHHHHHHHh--cCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHh
Q 011801 366 EKTLEGEIALWRTIVND--VKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQ 425 (477)
Q Consensus 366 ~~~~~~e~~l~~~ll~~--~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~ 425 (477)
... ..++.+ .+++ ..|..+ ..++.|.+-+..+.+++++.++++|++++.
T Consensus 413 --~~~-~~~l~~-~lr~~~~~i~~r-------~~~~~~~ld~r~~~~~~~~~~~~~~~~~~~ 463 (464)
T PRK04311 413 --DRS-LEALAA-RLRLLPPPVIGR-------IEDGRLLLDLRTLEEEDEERLAAALLEALN 463 (464)
T ss_pred --CCC-HHHHHH-HHhcCCCCEEEE-------EECCEEEEEeCcCCHHHHHHHHHHHHHHhh
Confidence 101 113333 3444 234443 246778888887889999999999998764
No 312
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.54 E-value=8.9e-12 Score=130.53 Aligned_cols=349 Identities=11% Similarity=0.105 Sum_probs=188.0
Q ss_pred CCCCccccccccc--cccc--cHHHHHHHHHhCCCCcccccccccccccccccCCC-CCcHHHHHHHHHHHhcccCCCCc
Q 011801 34 TQNPGGVIQLGLA--ENQL--CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDY-HGLPEFRQAVAKFMGKGRGGRVT 108 (477)
Q Consensus 34 ~~~~~~~i~l~~~--~n~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~-~G~~~lr~aia~~~~~~~g~~~~ 108 (477)
+.+.+.+||+..+ .+.+ +.+.+.+.+++.-+ .+..+... .+..+....+|+.+.+... .
T Consensus 85 D~dG~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~-------------~~~~~~~~~~~~~~~~~~lae~L~~~~~---~ 148 (504)
T PLN02760 85 DINGKKYLDALAGLWCTALGGSEPRLVAAATEQLN-------------KLPFYHSFWNRTTKPSLDLAKELLEMFT---A 148 (504)
T ss_pred ECCCCEEEEcCcCHHhcccCCCCHHHHHHHHHHHh-------------hccceecccccCcHHHHHHHHHHHhhcC---C
Confidence 4455678898653 3444 34556665555311 11111111 1223555556666543311 0
Q ss_pred cCCCcEEEeCChHHHHHHHHHHhc-------CCC-CeEEEcCCCccchHHHHhhhCCcE------------EEEEeccCC
Q 011801 109 FDPDRIVMGGGATGANELIMFCLA-------NPG-DAFLVPSPYYAAFDRDLSWRTGVQ------------IVPVHCDIS 168 (477)
Q Consensus 109 ~~~~~i~~t~G~t~al~~i~~~l~-------~~G-d~vlv~~P~y~~~~~~~~~~~g~~------------~~~v~~~~~ 168 (477)
.+-+.+++++++++|++.+++... .++ ..|+..+-+|++........+|.. +..++++
T Consensus 149 ~~~~~v~f~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p-- 226 (504)
T PLN02760 149 RKMGKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCP-- 226 (504)
T ss_pred CCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCC--
Confidence 123579999999999999998752 133 578888888887643221111321 1122211
Q ss_pred CCccc-----C--------HHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccC-CCHHHHHHHHHHHHhcCeEEEeccccc
Q 011801 169 NNFKI-----T--------REALEAAYERAQEASINIKGLIITNPSNPLGTT-LDRDTLKSLVSFINDKNIHLVCDEIYA 234 (477)
Q Consensus 169 ~~f~i-----~--------~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~-~~~~~l~~l~~~~~~~~~~lI~De~y~ 234 (477)
+.|.. + .++|++.+.+. ...++.+|++.--..-.|.+ .+.+-+++|.++|+++|+++|+||++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~T 304 (504)
T PLN02760 227 HYWRFHLPGETEEEFSTRLADNLENLILKE--GPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVIC 304 (504)
T ss_pred cccccCCCCCcHHHHHHHHHHHHHHHHHhc--CCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhh
Confidence 11110 1 23455555321 12356665554334455765 467779999999999999999999997
Q ss_pred ccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCC-ceEEEEEeCCHHHHHHHHH----------hcccCCCchH
Q 011801 235 ATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPG-FRVGIVYSFNDTVVNCGRK----------MSSFGLVSSQ 303 (477)
Q Consensus 235 ~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G-~RvG~i~~~~~~i~~~~~~----------~~~~~~vs~~ 303 (477)
++.-.+..+. .+. .+..+| +.+|+|.+| .| +.+|.+++++ .+.+.+.. ...|+ .++.
T Consensus 305 GfGRtG~~~a--~e~---~gv~PD----ivtlgK~lg-gG~~PigAv~~~~-~i~d~~~~~~~~~~~~~h~~T~~-gnPl 372 (504)
T PLN02760 305 AFGRLGTMFG--CDK---YNIKPD----LVSLAKALS-SAYMPIGAVLVSP-EISDVIHSQSNKLGSFAHGFTYS-GHPV 372 (504)
T ss_pred CCcccchhhH--HHh---cCCCCc----EEEeccccc-CCccccceEeecH-HHHhhhhcccccccCcccCCCCC-CCHH
Confidence 7533443221 111 122344 458899998 67 4899988854 44444321 11222 4555
Q ss_pred HHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHh---hCCCeEecCCceEEEEeeccchhhcc-CchH----HHHH
Q 011801 304 TQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLE---QVGINCLKSNAGLFFWMDLRHLLKEK-TLEG----EIAL 375 (477)
Q Consensus 304 ~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~---~~gi~~~~~~~g~~~~~~l~~~~~~~-~~~~----e~~l 375 (477)
+..++.+.|+--+ ++ ...+++++.-++|.++|+ +.++...-..-|+++-+.+....... .+.. ...+
T Consensus 373 ~~Aaala~Le~i~--~~---~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i 447 (504)
T PLN02760 373 SCAVALEALKIYK--ER---NIPEHVNKIAPRFQDGIKAFSGSPIIGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYF 447 (504)
T ss_pred HHHHHHHHHHHHH--hC---CHHHHHHHHHHHHHHHHHHHhcCCCeeeEEeCceEEEEEEecCCcccccccchhHHHHHH
Confidence 5555555553211 10 112233333333444443 33432222344677777774321111 1111 1234
Q ss_pred HHHHHHhcCeEEeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHhhh
Q 011801 376 WRTIVNDVKLNVSPGSSFQCTEPGWFRVCFAN-MDDDTLQVALNRIAAFVQQD 427 (477)
Q Consensus 376 ~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~-~~~e~l~~~l~~l~~~~~~~ 427 (477)
+..++ ++||.+.+.. ..+|++... +++++++++++++.+++.+.
T Consensus 448 ~~~~~-~~Gvl~~~~g-------~~lrl~Ppl~it~eeid~~~~~l~~al~~~ 492 (504)
T PLN02760 448 GAECK-KRGMLVRVAG-------DNIMMSPPLIITPEEVDELISIYGKALKAT 492 (504)
T ss_pred HHHHH-hCCcEEEecC-------CEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 45555 5699997631 358999765 49999999999999998764
No 313
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.53 E-value=1.2e-11 Score=128.13 Aligned_cols=348 Identities=11% Similarity=0.092 Sum_probs=186.7
Q ss_pred CCCCccccccccc--cccc--cHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCcc
Q 011801 34 TQNPGGVIQLGLA--ENQL--CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTF 109 (477)
Q Consensus 34 ~~~~~~~i~l~~~--~n~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~ 109 (477)
+.+.+..||+..+ ...+ +.+.+.+.+++.-+ .+..+....-..+....+|+.+.+... -
T Consensus 45 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~-------------~l~~~~~~~~~~~~~~~la~~L~~~~p----~ 107 (445)
T PRK09221 45 DADGRKILDGTAGLWCCNAGHGRPEIVEAVARQAA-------------TLDYAPAFQMGHPLAFELAERLAELAP----G 107 (445)
T ss_pred eCCCCEEEEccccHhhccCCCCCHHHHHHHHHHHH-------------hccCccccccCCHHHHHHHHHHHHhCC----C
Confidence 4556678888544 3334 34556666655311 111111100012334445555543321 1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhc------C-C-CCeEEEcCCCccchHHHHhhhCCc------------EEEEEeccC--
Q 011801 110 DPDRIVMGGGATGANELIMFCLA------N-P-GDAFLVPSPYYAAFDRDLSWRTGV------------QIVPVHCDI-- 167 (477)
Q Consensus 110 ~~~~i~~t~G~t~al~~i~~~l~------~-~-Gd~vlv~~P~y~~~~~~~~~~~g~------------~~~~v~~~~-- 167 (477)
..+++++++++++|++.+++... + + ..+|+...-+|++....+-..+|. .+..++...
T Consensus 108 ~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (445)
T PRK09221 108 GLDHVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDL 187 (445)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccc
Confidence 23689999999999999887532 1 1 257888888888764321111111 112222210
Q ss_pred -CCCccc--------CHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCC-CHHHHHHHHHHHHhcCeEEEecccccccc
Q 011801 168 -SNNFKI--------TREALEAAYERAQEASINIKGLIITNPSNPLGTTL-DRDTLKSLVSFINDKNIHLVCDEIYAATV 237 (477)
Q Consensus 168 -~~~f~i--------~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~-~~~~l~~l~~~~~~~~~~lI~De~y~~~~ 237 (477)
...|.. ..+++++.++.. ...++.+|++.--....|... +.+-+++|.++|+++|+++|+||++.++.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~l~~~i~~~--~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~G 265 (445)
T PRK09221 188 PENAFSKGQPEHGAELADDLERLVALH--DASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFG 265 (445)
T ss_pred cccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCC
Confidence 001111 124555555431 113677766664455667754 56679999999999999999999998643
Q ss_pred cCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCC-ceEEEEEeCCHHHHHHHHH--------h--cccCCCchHHHH
Q 011801 238 FSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPG-FRVGIVYSFNDTVVNCGRK--------M--SSFGLVSSQTQY 306 (477)
Q Consensus 238 ~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G-~RvG~i~~~~~~i~~~~~~--------~--~~~~~vs~~~q~ 306 (477)
-.+..+. . +. .+..+| +.+++|.+| .| +.+|.++++++ +.+.+.. . ..|+ .++++..
T Consensus 266 RtG~~~~-~-~~---~gv~PD----i~~~gK~l~-gG~~Pi~av~~~~~-i~~~~~~~~~~~~~~~~~~T~~-~~pl~~a 333 (445)
T PRK09221 266 RLGAAFA-A-ER---FGVTPD----IITFAKGLT-NGAIPMGAVIASDE-IYDAFMQGPEYAIEFFHGYTYS-AHPVACA 333 (445)
T ss_pred cCchhhH-H-Hh---cCCCCC----EEEeccccc-cCcccceeeEEcHH-HHHhhccCcccccccccccCCC-cCHHHHH
Confidence 3333211 1 11 111334 338899997 66 68999988554 4443321 0 1222 3455544
Q ss_pred HHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeE--ecCCceEEEEeeccchhhccCchHHHHHHHHHHHhc
Q 011801 307 LLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINC--LKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDV 383 (477)
Q Consensus 307 ~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~--~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~ 383 (477)
++.+.|+--+ + ....+++++.-+++.+.|+++ +... ....-|++.-+.+........ ....++++.++ +.
T Consensus 334 aa~a~L~~i~--~---~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrg~Gl~~~v~~~~~~~~~~-~~~~~~~~~~~-~~ 406 (445)
T PRK09221 334 AGLATLDIYR--E---EDLFERAAELAPYFEDAVHSLKGLPHVIDIRNIGLVAGIELAPRPGAPG-ARGYEAFMKCF-EK 406 (445)
T ss_pred HHHHHHHHHH--h---ccHHHHHHHHHHHHHHHHHhhccCCCEEEEecCceEEEEEEeccccccc-chHHHHHHHHH-HC
Confidence 4444443211 1 112334455555566666544 2111 112345666666653111111 11124555555 55
Q ss_pred CeEEeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHhh
Q 011801 384 KLNVSPGSSFQCTEPGWFRVCFAN-MDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 384 gI~v~pg~~f~~~~~~~~Rl~~~~-~~~e~l~~~l~~l~~~~~~ 426 (477)
||++.++ ...+|++... ++++++++++++|++++.+
T Consensus 407 Gv~~~~~-------~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~ 443 (445)
T PRK09221 407 GLLVRYT-------GDTIALSPPLIIEKAQIDELVDALGDALRA 443 (445)
T ss_pred CeEEeec-------CCEEEEECCccCCHHHHHHHHHHHHHHHHh
Confidence 9999764 2469999765 3999999999999999864
No 314
>PRK07482 hypothetical protein; Provisional
Probab=99.53 E-value=1.2e-11 Score=128.50 Aligned_cols=348 Identities=10% Similarity=0.034 Sum_probs=191.9
Q ss_pred CCCCccccccccc--cccc--cHHHHHHHHHhCCCCcccccccccccccccccCCC-CCcHHHHHHHHHHHhcccCCCCc
Q 011801 34 TQNPGGVIQLGLA--ENQL--CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDY-HGLPEFRQAVAKFMGKGRGGRVT 108 (477)
Q Consensus 34 ~~~~~~~i~l~~~--~n~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~-~G~~~lr~aia~~~~~~~g~~~~ 108 (477)
+.+.+.+||+..+ .+.+ +.+.+.+.+++..+ .+..+... .-..+.+..+|+.+.+...
T Consensus 46 D~dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~-------------~~~~~~~~~~~~~~~~~~lAe~L~~~~p---- 108 (461)
T PRK07482 46 DAQGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAK-------------ELAYYHTYVGHGTEASITLSKRIIDRAP---- 108 (461)
T ss_pred ECCCCEEEEcccchhhhcCCCCCHHHHHHHHHHHH-------------hcCccccccccCCHHHHHHHHHHHHhCC----
Confidence 4556678888654 3333 34666666665311 11111111 1123555666666654321
Q ss_pred cCCCcEEEeCChHHHHHHHHHHhc------C-C-CCeEEEcCCCccchHHHHhhhCC--------------cEEEEEecc
Q 011801 109 FDPDRIVMGGGATGANELIMFCLA------N-P-GDAFLVPSPYYAAFDRDLSWRTG--------------VQIVPVHCD 166 (477)
Q Consensus 109 ~~~~~i~~t~G~t~al~~i~~~l~------~-~-Gd~vlv~~P~y~~~~~~~~~~~g--------------~~~~~v~~~ 166 (477)
-+-+++++++++++|++.+++... . + ..+|+...-+|++....+...+| +..++.|..
T Consensus 109 ~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~ 188 (461)
T PRK07482 109 AGMSKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHY 188 (461)
T ss_pred CCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCcc
Confidence 124689999999999999987642 1 2 25688888888875422111111 111111210
Q ss_pred CCCC-ccc--------CHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccC-CCHHHHHHHHHHHHhcCeEEEeccccccc
Q 011801 167 ISNN-FKI--------TREALEAAYERAQEASINIKGLIITNPSNPLGTT-LDRDTLKSLVSFINDKNIHLVCDEIYAAT 236 (477)
Q Consensus 167 ~~~~-f~i--------~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~-~~~~~l~~l~~~~~~~~~~lI~De~y~~~ 236 (477)
.... +.. +++++++.+++. ...++.+|++.--....|.+ .+.+-+++|.++|++||+++|.||+..++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGf 266 (461)
T PRK07482 189 YRRADAGMSEEQFSAYCADELEELILAE--GPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGF 266 (461)
T ss_pred ccccccCCCHHHHHHHHHHHHHHHHHhc--CCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCC
Confidence 0000 000 245566655421 12357776665334455766 56778999999999999999999999886
Q ss_pred ccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCc-eEEEEEeCCHHHHHHHHH---------h-cccCCCchHHH
Q 011801 237 VFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGF-RVGIVYSFNDTVVNCGRK---------M-SSFGLVSSQTQ 305 (477)
Q Consensus 237 ~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~-RvG~i~~~~~~i~~~~~~---------~-~~~~~vs~~~q 305 (477)
.-.+..+.. +. .+..+| ++ +++|.+| .|+ .+|.+++.++ +.+.+.. . .+|+ .++++.
T Consensus 267 GRtG~~~a~--~~---~gv~PD--iv--~~gKgl~-gG~~Pi~av~~~~~-i~~~~~~~~~~~~~~~h~~T~~-gnpl~~ 334 (461)
T PRK07482 267 GRLGSMFGS--DH---YGIEPD--LI--TVAKGLT-SAYAPLSGSIVGEK-VWDVLEQGSDEHGAIGHGWTYS-GHPICA 334 (461)
T ss_pred CcCcchhhH--Hh---cCCCCC--EE--EEccccc-cCccccceeeecHH-HHHHHhcccccCCccccCCCCC-cCHHHH
Confidence 444443322 11 122344 22 5689998 885 8999988554 4443321 1 1222 456666
Q ss_pred HHHHHhcC---ChhhHHHHHHHHHHHHHHHHHHHHHHH----hhCCCeEecCCceEEEEeeccchhhc-cCchH----HH
Q 011801 306 YLLASMLS---DDEFVDNFLVETSKRLAKRHHNFTKGL----EQVGINCLKSNAGLFFWMDLRHLLKE-KTLEG----EI 373 (477)
Q Consensus 306 ~~~~~~L~---~~~~~~~~~~~~~~~l~~r~~~l~~~L----~~~gi~~~~~~~g~~~~~~l~~~~~~-~~~~~----e~ 373 (477)
.++.+.|+ +.++ .++.++.-+++.+.| +++++...-..-|+++.+.+...... ..++. ..
T Consensus 335 Aaa~a~L~~~~~~~l--------~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~ 406 (461)
T PRK07482 335 AAALANLDILERENL--------VGNAAEVGAYFRARLRAAFGDHPLVGEVRGVGMLAAVEFVADRDDRTPFDPALKIGP 406 (461)
T ss_pred HHHHHHHHHHHhCCH--------HHHHHHHHHHHHHHHHHHHhcCCCEEEEeeceeEEEEEeccCCCcCCCCChhhHHHH
Confidence 66555554 3222 112223333344444 33443323334567888887532111 11111 12
Q ss_pred HHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHhh
Q 011801 374 ALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFAN-MDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 374 ~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~-~~~e~l~~~l~~l~~~~~~ 426 (477)
.++..++ +.||++.++. ....+|+..+. ++++++++++++|.+++++
T Consensus 407 ~i~~~~~-~~Gvl~~~~~-----~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~ 454 (461)
T PRK07482 407 QVSAAAL-ERGVIARAMP-----HGDILGFAPPLVLTRAEADEIVAIAKDAVDE 454 (461)
T ss_pred HHHHHHH-HCCcEEecCC-----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 3555555 5699986532 12468887654 4999999999999999875
No 315
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.53 E-value=1.4e-11 Score=127.52 Aligned_cols=348 Identities=11% Similarity=0.066 Sum_probs=185.8
Q ss_pred CCCCccccccccc--cccc--cHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCcc
Q 011801 34 TQNPGGVIQLGLA--ENQL--CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTF 109 (477)
Q Consensus 34 ~~~~~~~i~l~~~--~n~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~ 109 (477)
+.+.+..||+..+ ...+ +.+.+.+.+++.-+ .+..........+....+|+.+.+... -
T Consensus 42 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~-------------~l~~~~~~~~~~~~~~~la~~l~~~~p----~ 104 (442)
T PRK13360 42 THDGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAG-------------ELDYAPAFQMGHPKAFELANRIAEIAP----G 104 (442)
T ss_pred eCCCCEEEECchhHHHhccCCCCHHHHHHHHHHHH-------------hCCCcccCCcCCHHHHHHHHHHHHhCC----C
Confidence 4455667887543 2334 34666666655311 111111111112444556665544321 1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhc------C-C-CCeEEEcCCCccchHHHHhhhCCc------------EEEEEeccC--
Q 011801 110 DPDRIVMGGGATGANELIMFCLA------N-P-GDAFLVPSPYYAAFDRDLSWRTGV------------QIVPVHCDI-- 167 (477)
Q Consensus 110 ~~~~i~~t~G~t~al~~i~~~l~------~-~-Gd~vlv~~P~y~~~~~~~~~~~g~------------~~~~v~~~~-- 167 (477)
..+++++++++++|++.+++... . + ..+|+...-+|++....+-..+|. .+..+|...
T Consensus 105 ~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~ 184 (442)
T PRK13360 105 GLNHVFFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDL 184 (442)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchh
Confidence 23589999999999999887532 1 2 257999998888864322111111 111222210
Q ss_pred -CCCcccC--------HHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccC-CCHHHHHHHHHHHHhcCeEEEecccccccc
Q 011801 168 -SNNFKIT--------REALEAAYERAQEASINIKGLIITNPSNPLGTT-LDRDTLKSLVSFINDKNIHLVCDEIYAATV 237 (477)
Q Consensus 168 -~~~f~i~--------~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~-~~~~~l~~l~~~~~~~~~~lI~De~y~~~~ 237 (477)
.+.|... .++|+++++.. ...++.+|++..-..-.|.. .+.+-+++|.++|+++|+++|+||++.++.
T Consensus 185 ~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~G 262 (442)
T PRK13360 185 ARNAFSKGQPEHGAELADELERLVTLH--DASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFG 262 (442)
T ss_pred hccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCC
Confidence 0112111 34566666421 12356665554334556765 467779999999999999999999997653
Q ss_pred cCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCC-ceEEEEEeCCHHHHHHHHH---------h-cccCCCchHHHH
Q 011801 238 FSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPG-FRVGIVYSFNDTVVNCGRK---------M-SSFGLVSSQTQY 306 (477)
Q Consensus 238 ~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G-~RvG~i~~~~~~i~~~~~~---------~-~~~~~vs~~~q~ 306 (477)
-.+..+. .+. .+..+| + .+|+|.+| .| +.+|.+++.++ +.+.+.. . ..|+ .++++..
T Consensus 263 rtG~~~a--~~~---~gv~PD--i--vt~gK~l~-gG~~P~gav~~~~~-i~~~~~~~~~~~~~~~~~~T~~-g~pl~~a 330 (442)
T PRK13360 263 RLGAPFA--AQY---FGVTPD--L--LTCAKGLT-NGAIPMGAVFVSSE-IHDAFMQGPEAGIEFFHGYTYS-GHPLACA 330 (442)
T ss_pred CCccchh--hhh---cCCCCc--e--eeeeeccc-cCccceEEEEEcHH-HHHHhhcCCccccccccCCCCC-CCHHHHH
Confidence 3333221 111 111334 2 38899998 67 78999988554 4443321 1 1222 3555555
Q ss_pred HHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCC-CeE--ecCCceEEEEeeccchhhccCchHHHHHHHHHHHhc
Q 011801 307 LLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVG-INC--LKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDV 383 (477)
Q Consensus 307 ~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~g-i~~--~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~ 383 (477)
++.+.|+--+ +. ...+++++.-+++.+.|+++. ... .....|++.-+.+........ ....+++..+++ +
T Consensus 331 aa~a~L~~l~--~~---~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~~~~l~~~~~~~~-~~~~~~~~~l~~-~ 403 (442)
T PRK13360 331 AALATLDLYE--RE---GLLTRAARLAPYWEDALHSLRDAPHVIDIRNLGLVGAVELAPRDGKPG-KRAYEVFLKCFE-K 403 (442)
T ss_pred HHHHHHHHHH--hC---CHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEEecCCCCcc-hhHHHHHHHHHH-C
Confidence 5544443211 11 122333444445555554431 111 112335555555542111111 112345666554 5
Q ss_pred CeEEeCCCCCCCCCCCEEEEEeccC-CHHHHHHHHHHHHHHHhh
Q 011801 384 KLNVSPGSSFQCTEPGWFRVCFANM-DDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 384 gI~v~pg~~f~~~~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~~ 426 (477)
||++.++ .+.+|++.... +++++++++++|.+++++
T Consensus 404 Gvl~~~~-------~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~ 440 (442)
T PRK13360 404 GLMIRYT-------GDILALSPPLIIEEAQIDELFDILAQALKE 440 (442)
T ss_pred CcEEEec-------CCEEEEeCCCccCHHHHHHHHHHHHHHHHH
Confidence 9999763 24699997653 999999999999999864
No 316
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.53 E-value=1.2e-11 Score=128.49 Aligned_cols=332 Identities=12% Similarity=0.138 Sum_probs=183.8
Q ss_pred CCCCccccccccc--cccc--cHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCcc
Q 011801 34 TQNPGGVIQLGLA--ENQL--CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTF 109 (477)
Q Consensus 34 ~~~~~~~i~l~~~--~n~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~ 109 (477)
+.+.+..||+..+ .+.+ +.+.+.+.+++.-+ ....|.. ..+....+|+.+.+...
T Consensus 95 D~dG~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~-------------~~~~~~~---~~~~~~~lAe~l~~~~p----- 153 (474)
T PLN02482 95 DVDGNEYIDYVGSWGPAIIGHADDEVLAALAETMK-------------KGTSFGA---PCLLENVLAEMVIDAVP----- 153 (474)
T ss_pred ECCCCEEEEecccccccccCCCCHHHHHHHHHHHh-------------hCCCCCC---CCHHHHHHHHHHHHhCC-----
Confidence 4445667887544 3334 34667776666321 1122222 13555566666654321
Q ss_pred CCCcEEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCccchHHHHhhh--CC-----------c------EEEEEeccCC
Q 011801 110 DPDRIVMGGGATGANELIMFCLA--NPGDAFLVPSPYYAAFDRDLSWR--TG-----------V------QIVPVHCDIS 168 (477)
Q Consensus 110 ~~~~i~~t~G~t~al~~i~~~l~--~~Gd~vlv~~P~y~~~~~~~~~~--~g-----------~------~~~~v~~~~~ 168 (477)
..+.+.+++++++|++.+++.-. ....+|+...-+|++....+... .| . .++.++
T Consensus 154 ~~~~v~f~~SGsEA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---- 229 (474)
T PLN02482 154 SVEMVRFVNSGTEACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAP---- 229 (474)
T ss_pred CCCEEEEeCChHHHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEec----
Confidence 14799999999999999887632 22367888888888864321100 01 1 011111
Q ss_pred CCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCC-HHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHH
Q 011801 169 NNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLD-RDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVA 247 (477)
Q Consensus 169 ~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~-~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~ 247 (477)
|+ |++++++.+++. ..++.+|++.--..-.|.+.+ .+.+++|.++|+++|+++|+||+..++ ..+.. ...
T Consensus 230 --~n-d~~~l~~~l~~~---~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGf-R~g~~--ga~ 300 (474)
T PLN02482 230 --YN-DLEAVKKLFEAN---KGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGF-RIAYG--GAQ 300 (474)
T ss_pred --CC-ChHHHHHHHHhC---CCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCe-ecCcc--hHh
Confidence 11 678888887642 335666555433455676654 677999999999999999999999765 33322 112
Q ss_pred HhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhc------ccCCCchHHHHHHHHhcC---ChhhH
Q 011801 248 EVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMS------SFGLVSSQTQYLLASMLS---DDEFV 318 (477)
Q Consensus 248 ~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~------~~~~vs~~~q~~~~~~L~---~~~~~ 318 (477)
+.. +..+| +.+|+|.+| .|+.+|.+++.+ .+.+.+.... .|+ .++++..++.+.|+ +.+.
T Consensus 301 ~~~---gv~PD----i~t~gK~lg-gG~Pigav~g~~-ei~~~~~~~~~~~~~~T~~-gnpl~~aAala~L~~l~~~~~- 369 (474)
T PLN02482 301 EYF---GITPD----LTTLGKVIG-GGLPVGAYGGRR-EIMEMVAPAGPMYQAGTLS-GNPLAMTAGIHTLKRLQQPGT- 369 (474)
T ss_pred HHh---CCCCC----EEEecchhh-CCCceEEEEEcH-HHHHhhccCCCcccccCcc-hhHHHHHHHHHHHHHHhccCH-
Confidence 221 12334 248899999 899999998854 4544443211 111 34444444444433 2222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh----CCCeEe-cCCceEEEEeeccc-hh----h--ccCchHHHHHHHHHHHhcCeE
Q 011801 319 DNFLVETSKRLAKRHHNFTKGLEQ----VGINCL-KSNAGLFFWMDLRH-LL----K--EKTLEGEIALWRTIVNDVKLN 386 (477)
Q Consensus 319 ~~~~~~~~~~l~~r~~~l~~~L~~----~gi~~~-~~~~g~~~~~~l~~-~~----~--~~~~~~e~~l~~~ll~~~gI~ 386 (477)
.+++.++-++|.++|.+ .|+.+. ..-.|++. +.+.. .. + ......-..+++.+++ +||+
T Consensus 370 -------~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~g~~g-i~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~-~Gv~ 440 (474)
T PLN02482 370 -------YEYLDKITKKLIQGILEAGKKAGHEMCGGYISGMFG-FFFTEGPVYNFADAKKSDTAKFARFHRGMLE-EGVY 440 (474)
T ss_pred -------HHHHHHHHHHHHHHHHHHHHhcCCCEEEcccceEEE-EEEecCCccChhhhccCCHHHHHHHHHHHHH-CCeE
Confidence 23333344444444443 344443 23344432 22211 00 0 0011112245666664 5999
Q ss_pred EeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhh
Q 011801 387 VSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 387 v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~ 426 (477)
+.|.. +.. ++ +++. +++++++++++++.+++.+
T Consensus 441 ~~~~~-~~~----~~-psl~-ht~~dId~~l~al~~~l~~ 473 (474)
T PLN02482 441 LAPSQ-FEA----GF-TSLA-HTEEDIDFTIAAAERVLAR 473 (474)
T ss_pred EeccC-CCC----Cc-CCCC-CCHHHHHHHHHHHHHHHHh
Confidence 98742 111 11 3444 4999999999999998864
No 317
>PRK06062 hypothetical protein; Provisional
Probab=99.53 E-value=8.3e-12 Score=129.47 Aligned_cols=347 Identities=13% Similarity=0.129 Sum_probs=187.8
Q ss_pred CCCCccccccccc--cccc--cHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCcc
Q 011801 34 TQNPGGVIQLGLA--ENQL--CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTF 109 (477)
Q Consensus 34 ~~~~~~~i~l~~~--~n~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~ 109 (477)
+.+.+.+||+..+ .+.+ +.+.+.+.+++.-+ .+..+.... ..+.+..+|+.+.+... -
T Consensus 49 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~-------------~~~~~~~~~-~~~~~~~lae~L~~~~p----~ 110 (451)
T PRK06062 49 DYEGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAA-------------RLCTVAPAH-ANDARSEAARLIAERAP----G 110 (451)
T ss_pred ECCCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHH-------------hcCCcCCcc-CCHHHHHHHHHHHHhCC----C
Confidence 4556678888543 3434 34566666655311 111111111 13444555555544321 1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCccchHHHHhhhCCcE-----------EEEEeccCC--CCcc--
Q 011801 110 DPDRIVMGGGATGANELIMFCLA--NPGDAFLVPSPYYAAFDRDLSWRTGVQ-----------IVPVHCDIS--NNFK-- 172 (477)
Q Consensus 110 ~~~~i~~t~G~t~al~~i~~~l~--~~Gd~vlv~~P~y~~~~~~~~~~~g~~-----------~~~v~~~~~--~~f~-- 172 (477)
..+++++++++++|++.+++.-. ....+|+...-+|++....+...++.. +..++.+.. ..|.
T Consensus 111 ~~~~v~f~~SGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 190 (451)
T PRK06062 111 DLSKVFFTNGGADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHAT 190 (451)
T ss_pred CCCEEEEcCChHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCC
Confidence 23689999999999999987632 223678888888887654332221211 112221110 0110
Q ss_pred cC-------HHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccC-CCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcc
Q 011801 173 IT-------REALEAAYERAQEASINIKGLIITNPSNPLGTT-LDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFT 244 (477)
Q Consensus 173 i~-------~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~-~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~ 244 (477)
-+ ++.+++.++.. ...++.+|++.--..-.|.+ .+.+-+++|.++|+++|+++|.||++.++.-.+..+
T Consensus 191 ~~~~~~~~~~~~le~~l~~~--~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~- 267 (451)
T PRK06062 191 TEEEECERALAHLERVIELE--GPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWF- 267 (451)
T ss_pred ChHHHHHHHHHHHHHHHHhc--CCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHH-
Confidence 01 45566666421 12357776665334445665 467779999999999999999999998742222211
Q ss_pred cHHHhhhhccCCCCcEEEEecCCcccCCCCc-eEEEEEeCCHHHHHHHHHh-----cccCCCchHHHHHHHHhcC---Ch
Q 011801 245 SVAEVIQEMDCNRDLIHIIYSLSKDMGLPGF-RVGIVYSFNDTVVNCGRKM-----SSFGLVSSQTQYLLASMLS---DD 315 (477)
Q Consensus 245 s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~-RvG~i~~~~~~i~~~~~~~-----~~~~~vs~~~q~~~~~~L~---~~ 315 (477)
. .+ ..+..+| +.+|+|.+| .|+ .+|.+++.++ +.+.+... ..|+ .++++..++.+.|+ +.
T Consensus 268 a-~~---~~gv~PD----i~t~gK~lg-gG~~Pigav~~~~~-i~~~~~~~~~~~~~T~~-gnpl~~Aaa~a~L~~l~~~ 336 (451)
T PRK06062 268 A-IE---HFGVVPD----LITFAKGVN-SGYVPLGGVAISEA-IAATFADRPYPGGLTYS-GHPLACAAAVATINAMEEE 336 (451)
T ss_pred H-HH---hcCCCCC----eeeechhhh-cCCcCcEEEEEcHH-HHHHhccCCCCCCCCCC-CCHHHHHHHHHHHHHHHhc
Confidence 1 11 1122344 337899998 785 9999999664 54444321 1222 45555555555553 22
Q ss_pred hhHHHHHHHHHHHHHHHH-HHHHHHHhh----CCCeEecCCceEEEEeeccchhhccC-c-------hHHHHHHHHHHHh
Q 011801 316 EFVDNFLVETSKRLAKRH-HNFTKGLEQ----VGINCLKSNAGLFFWMDLRHLLKEKT-L-------EGEIALWRTIVND 382 (477)
Q Consensus 316 ~~~~~~~~~~~~~l~~r~-~~l~~~L~~----~gi~~~~~~~g~~~~~~l~~~~~~~~-~-------~~e~~l~~~ll~~ 382 (477)
++ .++.++.- +++.+.|++ .++...-..-|+++-+.+........ + .....+++.++ +
T Consensus 337 ~l--------~~~~~~~G~~~l~~~L~~l~~~~~~v~~vrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~ 407 (451)
T PRK06062 337 GI--------VENAARIGAEVLGPGLRELAERHPSVGEVRGLGVFWALELVADRETREPLAPYGASSAAMAAVKAACK-E 407 (451)
T ss_pred CH--------HHHHHHHHHHHHHHHHHHHHhcCCcEEeEeccccEEEEEEcccccccCCCcccchhhHHHHHHHHHHH-H
Confidence 22 11222221 233333333 23211222345777676642110000 0 01124555555 5
Q ss_pred cCeEEeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHhhhh
Q 011801 383 VKLNVSPGSSFQCTEPGWFRVCFAN-MDDDTLQVALNRIAAFVQQDK 428 (477)
Q Consensus 383 ~gI~v~pg~~f~~~~~~~~Rl~~~~-~~~e~l~~~l~~l~~~~~~~~ 428 (477)
.||++.+. .+.+|++... +++++++++++++.+++++.+
T Consensus 408 ~Gvl~~~~-------~~~lrl~ppl~~t~~eid~~~~~l~~~l~~~~ 447 (451)
T PRK06062 408 RGLLPFVN-------GNRIHVVPPCTVTEDEVREGLAILDAALAVAD 447 (451)
T ss_pred CCcEEeec-------CCEEEEECCccCCHHHHHHHHHHHHHHHHHhh
Confidence 69998652 2468998865 499999999999999997644
No 318
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.52 E-value=2.6e-11 Score=125.72 Aligned_cols=343 Identities=15% Similarity=0.123 Sum_probs=189.3
Q ss_pred CCCCccccccccc--cccc--cHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCcc
Q 011801 34 TQNPGGVIQLGLA--ENQL--CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTF 109 (477)
Q Consensus 34 ~~~~~~~i~l~~~--~n~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~ 109 (477)
+.+.+.+||+..+ ...+ +.+.+.+.+++.-+. ......+. + ..+.+..+|+.+.+..+ -
T Consensus 50 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~----------~~~~~~~~-~--~~~~~~~lAe~L~~~~p----~ 112 (453)
T PRK06943 50 DRDGRRYLDAISSWWVNLFGHANPRINAALKDQLDT----------LEHAMLAG-C--THEPAIELAERLAALTG----G 112 (453)
T ss_pred eCCCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHh----------cCCccccc-c--CCHHHHHHHHHHHHhCC----C
Confidence 4556678888544 3444 346666666553110 00001110 0 12344556665554322 1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhc-------CCC-CeEEEcCCCccchHHHHhhhCC--------------cEEEEEeccC
Q 011801 110 DPDRIVMGGGATGANELIMFCLA-------NPG-DAFLVPSPYYAAFDRDLSWRTG--------------VQIVPVHCDI 167 (477)
Q Consensus 110 ~~~~i~~t~G~t~al~~i~~~l~-------~~G-d~vlv~~P~y~~~~~~~~~~~g--------------~~~~~v~~~~ 167 (477)
.-+.+++++++++|++.+++.-. .+| .+|+...-+|++....+-..+| ...++.|...
T Consensus 113 ~~~~v~f~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~ 192 (453)
T PRK06943 113 TLGHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDAR 192 (453)
T ss_pred CCCEEEEeCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCcc
Confidence 12589999999999999987741 122 6789889888875422211112 2222222110
Q ss_pred CCCccc--------CHHHHHHHHHHHHHhCCCeeEEEEeC-CCCCccc-CCCHHHHHHHHHHHHhcCeEEEecccccccc
Q 011801 168 SNNFKI--------TREALEAAYERAQEASINIKGLIITN-PSNPLGT-TLDRDTLKSLVSFINDKNIHLVCDEIYAATV 237 (477)
Q Consensus 168 ~~~f~i--------~~~~l~~~~~~~~~~~~~~k~vii~n-P~NPtG~-~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~ 237 (477)
...+.. +++++++.++. ...++.+|++.- ...-.|. ..+.+-+++|.++|++||+++|.||+..++.
T Consensus 193 ~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~G 269 (453)
T PRK06943 193 GARPGETAADVAARALADVRRLFAE---RAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCG 269 (453)
T ss_pred ccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCC
Confidence 000110 23556666542 234787777764 2455676 4577789999999999999999999998754
Q ss_pred cCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCC-ceEEEEEeCCHHHHHHHHH--------h-cccCCCchHHHHH
Q 011801 238 FSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPG-FRVGIVYSFNDTVVNCGRK--------M-SSFGLVSSQTQYL 307 (477)
Q Consensus 238 ~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G-~RvG~i~~~~~~i~~~~~~--------~-~~~~~vs~~~q~~ 307 (477)
..+..+. . +. .+..+| ++ +++|.+| .| +.+|.+++.++ +.+.... . .+|+ .++++..+
T Consensus 270 RtG~~fa-~-~~---~gv~PD--iv--t~gKgl~-gG~~Pi~av~~~~e-i~~~~~~~~~~~~~~~~~T~~-gnpl~~aa 337 (453)
T PRK06943 270 RTGTFFA-C-EQ---AGVWPD--FL--CLSKGIS-GGYLPLSLVLSRDA-IFAAFYDDDVTRGFLHSHSYT-GNPLACRA 337 (453)
T ss_pred CCcchhH-H-Hh---CCCCCC--eE--eeehhhc-cCcccceEEEEcHH-HHHhhcccCccCCccCCCCCC-CCHHHHHH
Confidence 3343221 1 11 122334 22 5689998 89 59999999655 4433321 1 1222 45566555
Q ss_pred HHHhcC---ChhhHHHHHHHHHHHHHHHHHHHHHHHhhC----CCeEecCCceEEEEeeccchhhccCchHHHHHHHHHH
Q 011801 308 LASMLS---DDEFVDNFLVETSKRLAKRHHNFTKGLEQV----GINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIV 380 (477)
Q Consensus 308 ~~~~L~---~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~----gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll 380 (477)
+.+.|+ +.++ + ++.++.-++|.++|+++ ++.-. ..-|+++-+++...... .......+...++
T Consensus 338 a~a~L~~i~~~~l----~----~~~~~~G~~l~~~L~~l~~~~~v~~v-rG~Gl~~gvel~~~~~~-~~~~~~~i~~~~~ 407 (453)
T PRK06943 338 ALATLDLFAEDDV----L----ARNARKSARLRAALAPLAAHPQVRHL-RQRGTIFAFDVALDGDA-ARTFSRRFFEAAL 407 (453)
T ss_pred HHHHHHHHHhcCH----H----HHHHHHHHHHHHHHHHHhcCCCEEeE-eccccEEEEEEccCCCc-chHHHHHHHHHHH
Confidence 555554 2222 1 22223333344444332 23322 24567777777521111 1111123555555
Q ss_pred HhcCeEEeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHhh
Q 011801 381 NDVKLNVSPGSSFQCTEPGWFRVCFAN-MDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 381 ~~~gI~v~pg~~f~~~~~~~~Rl~~~~-~~~e~l~~~l~~l~~~~~~ 426 (477)
++||++.+.. ..+|++... ++++++++++++|++++++
T Consensus 408 -~~Gll~~~~g-------~~l~~~Ppl~it~~eid~~~~~l~~al~~ 446 (453)
T PRK06943 408 -ERELLLRPIG-------TTVYLMPPYVLDDDEIAWLAERTRATLDA 446 (453)
T ss_pred -HCCcEEEecC-------CEEEEeCCCcCCHHHHHHHHHHHHHHHHH
Confidence 5699997631 358998654 4999999999999999975
No 319
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.52 E-value=9.5e-12 Score=128.07 Aligned_cols=345 Identities=12% Similarity=0.084 Sum_probs=185.4
Q ss_pred CCCCccccccccc--cccc--cHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCcc
Q 011801 34 TQNPGGVIQLGLA--ENQL--CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTF 109 (477)
Q Consensus 34 ~~~~~~~i~l~~~--~n~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~ 109 (477)
+.+.+..||+..+ .+.+ +.+.+.+.+++.-+ ....+.-. .+.+..+|+.+.+..+ .
T Consensus 49 D~dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~-------------~~~~~~~~---~~~~~~la~~L~~~~~----~ 108 (433)
T PRK00615 49 DSLGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAE-------------RGTSYGLT---SEQEILFAEELFSYLG----L 108 (433)
T ss_pred ECCCCEEEEcccchhccccCCCCHHHHHHHHHHHH-------------hCCCCCCC---CHHHHHHHHHHHHhCC----C
Confidence 4455667888544 3334 34666666655311 11122111 2334445555543321 1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhc-CCC-CeEEEcCCCccchHHH---HhhhCCcEEEEEe----ccC--CC----CcccC
Q 011801 110 DPDRIVMGGGATGANELIMFCLA-NPG-DAFLVPSPYYAAFDRD---LSWRTGVQIVPVH----CDI--SN----NFKIT 174 (477)
Q Consensus 110 ~~~~i~~t~G~t~al~~i~~~l~-~~G-d~vlv~~P~y~~~~~~---~~~~~g~~~~~v~----~~~--~~----~f~i~ 174 (477)
..+++++++++++|++.+++.-. -.| ..|+...-+|++.... .....+....+.+ ... .. .| -|
T Consensus 109 ~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d 187 (433)
T PRK00615 109 EDHKIRFVSSGTEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPY-ND 187 (433)
T ss_pred CcCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCC-CC
Confidence 23689999999999999987642 233 5788888888885421 1011111000000 000 00 01 16
Q ss_pred HHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCC-CHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhc
Q 011801 175 REALEAAYERAQEASINIKGLIITNPSNPLGTTL-DRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEM 253 (477)
Q Consensus 175 ~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~-~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~ 253 (477)
.+++++.+++. +.++.+|++..-..-.|... +.+-+++|.++|++||+++|+||++.++ ..+.. ...+. .
T Consensus 188 ~~~l~~~l~~~---~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~-R~G~~--ga~~~---~ 258 (433)
T PRK00615 188 FQIFQTVMNSL---GHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGF-RVAQG--GAAAI---Y 258 (433)
T ss_pred HHHHHHHHHhc---CCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccc-cccHh--HHHHh---c
Confidence 78888887642 23566655543344457655 5667999999999999999999999765 23321 11111 1
Q ss_pred cCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhcc---cC--CCchHHHHHHHHhcC---ChhhHHHHHHHH
Q 011801 254 DCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSS---FG--LVSSQTQYLLASMLS---DDEFVDNFLVET 325 (477)
Q Consensus 254 ~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~~---~~--~vs~~~q~~~~~~L~---~~~~~~~~~~~~ 325 (477)
+..+| ++ +|+|.+| .|+.+|+++++++ +.+.+..... .+ ..++++..++.+.|+ +.+. .+.+.+.
T Consensus 259 gv~PD--i~--~~gK~lg-gG~p~~av~~~~~-i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~~~~-~~~~~~~ 331 (433)
T PRK00615 259 HVKPD--IT--VYGKILG-GGLPAAAVVAHKS-IMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCREQGF-YTQLSTL 331 (433)
T ss_pred CCCCC--eE--EEccccc-CCcceeeeeecHH-HHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhcccH-HHHHHHH
Confidence 22334 22 5899998 7889999999554 4444421111 11 134555555444443 2222 1222222
Q ss_pred HHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchh----hcc---CchHHHHHHHHHHHhcCeEEeCCCCCCCCCC
Q 011801 326 SKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLL----KEK---TLEGEIALWRTIVNDVKLNVSPGSSFQCTEP 398 (477)
Q Consensus 326 ~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~----~~~---~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~ 398 (477)
.++++ +.+.+.+.+.|+.+.....|.++.+.+.... .+. ..+....++..+++ +||.+.|+.. +
T Consensus 332 g~~l~---~~l~~~~~~~g~~v~~~r~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~~~-----~ 402 (433)
T PRK00615 332 EQNFL---SPIEEMIRSQGFPVSLVRYGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFS-KGVYLSPSPF-----E 402 (433)
T ss_pred HHHHH---HHHHHHHHHcCCCeEEEeeceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHH-CCeeecCccc-----c
Confidence 22332 2233444444554332225677777775321 100 11122345666665 5999987532 1
Q ss_pred CEEEEEeccCCHHHHHHHHHHHHHHHhh
Q 011801 399 GWFRVCFANMDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 399 ~~~Rl~~~~~~~e~l~~~l~~l~~~~~~ 426 (477)
.++ ++.+ +++++++++++++.+++++
T Consensus 403 ~~~-ls~~-ht~~did~~~~a~~~~~~~ 428 (433)
T PRK00615 403 ASF-LSSA-HSMENLDYAQNVLIDSLEK 428 (433)
T ss_pred ccc-eecC-CCHHHHHHHHHHHHHHHHH
Confidence 122 4544 4999999999999999876
No 320
>PRK06917 hypothetical protein; Provisional
Probab=99.51 E-value=4e-11 Score=124.25 Aligned_cols=314 Identities=16% Similarity=0.116 Sum_probs=172.6
Q ss_pred HHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhc-------CCC-CeEEEcCCCccchHHHHhhhCCcE--
Q 011801 90 EFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLA-------NPG-DAFLVPSPYYAAFDRDLSWRTGVQ-- 159 (477)
Q Consensus 90 ~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~-------~~G-d~vlv~~P~y~~~~~~~~~~~g~~-- 159 (477)
+.+..+|+.+.+... -..+.+++++++++|++.+++.-. .+| .+|+...-+|++....+...++..
T Consensus 74 ~~~~~lae~L~~~~p----~~~~~v~f~~sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~ 149 (447)
T PRK06917 74 EPAEKLAKKLSDLSP----GDLNWSFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLR 149 (447)
T ss_pred HHHHHHHHHHHHhCC----CCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccc
Confidence 445556666554321 123579999999999999987651 133 678888888887654322221211
Q ss_pred ----------EEEEeccCCCC--ccc--------CHHHHHHHHHHHHHhCCCeeEEEEeCCC-CCccc-CCCHHHHHHHH
Q 011801 160 ----------IVPVHCDISNN--FKI--------TREALEAAYERAQEASINIKGLIITNPS-NPLGT-TLDRDTLKSLV 217 (477)
Q Consensus 160 ----------~~~v~~~~~~~--f~i--------~~~~l~~~~~~~~~~~~~~k~vii~nP~-NPtG~-~~~~~~l~~l~ 217 (477)
+..++...... +.- +.+.+++.+++. ...++.+|++.--. +--|. ..+.+-+++|.
T Consensus 150 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~--~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr 227 (447)
T PRK06917 150 RQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIERI--GAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIK 227 (447)
T ss_pred cccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEeccccCcCceecCCHHHHHHHH
Confidence 11111111000 000 134555555421 11357777666323 33444 45678899999
Q ss_pred HHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCc-eEEEEEeCCHHHHHHHHHh--
Q 011801 218 SFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGF-RVGIVYSFNDTVVNCGRKM-- 294 (477)
Q Consensus 218 ~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~-RvG~i~~~~~~i~~~~~~~-- 294 (477)
++|+++|+++|.||+..++.-.+..+.. +. .+..+| +-+++|.+| .|+ .+|.+++.++ +.+.+...
T Consensus 228 ~lc~~~g~llI~DEv~tGfGRtG~~~a~--~~---~gv~PD----i~~~gK~l~-~G~~Pi~a~~~~~~-i~~~~~~~~~ 296 (447)
T PRK06917 228 EICDHYDILFIADEVMTGLGRTGAMFAM--EH---WGVEPD----IMTLGKGLG-AGYTPIAATVVSDR-VMEPILRGSR 296 (447)
T ss_pred HHHHHcCCEEEEechhhCcCcccchhhH--Hh---cCCCCC----EEEeeehhc-cCCcceEEEEEcHH-HHHHHhccCc
Confidence 9999999999999999874333332211 11 112344 237799998 886 9999999654 44433211
Q ss_pred -----cccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhh----CCCeEecCCceEEEEeeccchhh
Q 011801 295 -----SSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQ----VGINCLKSNAGLFFWMDLRHLLK 365 (477)
Q Consensus 295 -----~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~----~gi~~~~~~~g~~~~~~l~~~~~ 365 (477)
.++ ..++++..++.+.|+--+ + +...++++++-++|.+.|++ .++......-|+++.+.+.....
T Consensus 297 ~~~~~~T~-~gnpl~~aaa~a~l~~l~--~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ie~~~~~~ 370 (447)
T PRK06917 297 SIMSGHTL-SANPLSAATALAVLEYME--K---HNLPEKAAEKGEYLIKGLQKVQQQSTIIGDVRGKGLLIGVEFVADKK 370 (447)
T ss_pred ccccccCC-CCCHHHHHHHHHHHHHHH--H---CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeecceEEEEEEeccCC
Confidence 122 245666555555554211 0 01122333333444444433 34322223456777777742111
Q ss_pred c-cCc----hHHHHHHHHHHHhcCeEEeCCCC-CCCCCCCEEEEEeccC-CHHHHHHHHHHHHHHHhhh
Q 011801 366 E-KTL----EGEIALWRTIVNDVKLNVSPGSS-FQCTEPGWFRVCFANM-DDDTLQVALNRIAAFVQQD 427 (477)
Q Consensus 366 ~-~~~----~~e~~l~~~ll~~~gI~v~pg~~-f~~~~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~~~ 427 (477)
. +.+ +....++..++ +.||++.|+.. ......+.+|++.+.. +++++++++++|.+++++.
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~~~~~~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 438 (447)
T PRK06917 371 TKQPFSKSQAVASELISVAA-KNGLLLYPAVAGQDGKEGDAVIIAPPMTITYSELDELLSIFAKSVEEM 438 (447)
T ss_pred cCCCCcchhHHHHHHHHHHH-hCCcEEEecccccCCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 0 011 11223455555 46999987521 1111235799987753 9999999999999998753
No 321
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.51 E-value=3.9e-12 Score=122.22 Aligned_cols=290 Identities=18% Similarity=0.245 Sum_probs=191.2
Q ss_pred CcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHH----HhhhCCcEEEE
Q 011801 87 GLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRD----LSWRTGVQIVP 162 (477)
Q Consensus 87 G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~----~~~~~g~~~~~ 162 (477)
-...|.+.||..-+.. .-+.+++++.|+..++..++.+||.|+-..--|.+.... ++.. |+++..
T Consensus 63 T~~vlE~RiAaLEGG~----------aa~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~-Gi~v~f 131 (426)
T COG2873 63 TTDVLEERIAALEGGV----------AALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRL-GIEVRF 131 (426)
T ss_pred hHHHHHHHHHHhhcch----------hhhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhc-CcEEEE
Confidence 3578888888876521 245567778999999999999999999888888775543 4545 999998
Q ss_pred EeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCC
Q 011801 163 VHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPK 242 (477)
Q Consensus 163 v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~ 242 (477)
++-+ |++.+++++++ ++|+|++..-.||-+.+.+ +++|.++|+++++.+|+|...+.-++-.
T Consensus 132 vd~~-------d~~~~~~aI~~------nTkavf~EtigNP~~~v~D---ie~ia~iAh~~gvpliVDNT~atpyl~r-- 193 (426)
T COG2873 132 VDPD-------DPENFEAAIDE------NTKAVFAETIGNPGLDVLD---IEAIAEIAHRHGVPLIVDNTFATPYLCR-- 193 (426)
T ss_pred eCCC-------CHHHHHHHhCc------ccceEEEEeccCCCccccC---HHHHHHHHHHcCCcEEEecCCCcceecc--
Confidence 8743 68999999976 9999999999999999999 9999999999999999999886422211
Q ss_pred cccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHH--------------------------------
Q 011801 243 FTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNC-------------------------------- 290 (477)
Q Consensus 243 ~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~-------------------------------- 290 (477)
+ + +.+..|+++|+||.+|=.|--+|-++.......-.
T Consensus 194 --P---~------~hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~ 262 (426)
T COG2873 194 --P---I------EHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIK 262 (426)
T ss_pred --h---h------hcCCCEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHHH
Confidence 1 1 34566899999999998888888777532111100
Q ss_pred H--HHhcccC-CCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCC-Ce------------------Ee
Q 011801 291 G--RKMSSFG-LVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVG-IN------------------CL 348 (477)
Q Consensus 291 ~--~~~~~~~-~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~g-i~------------------~~ 348 (477)
. .-++..+ ..|++....+..-|+. +.-+.+|..++...+.+.|+++. +. ++
T Consensus 263 ~r~~~lRDlGa~lsPfnAfl~lqGlET-------L~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~~~~h~la~kyl 335 (426)
T COG2873 263 ARVQLLRDLGATLSPFNAFLLLQGLET-------LSLRMERHCENALKVAEFLENHPKVAWVNYPGLASHPYHALAKKYL 335 (426)
T ss_pred HHHHHHHhcccccCcHHHHHHHhchhh-------hHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCCCCcchhHHHhhc
Confidence 0 0011222 2333433333333322 23334555666677788887751 11 22
Q ss_pred cCCceEEEEeeccchhhc-cCchHHHHHHHHHHH---hcCeEEeCCCCCCCC-----------CCCEEEEEeccCCHHHH
Q 011801 349 KSNAGLFFWMDLRHLLKE-KTLEGEIALWRTIVN---DVKLNVSPGSSFQCT-----------EPGWFRVCFANMDDDTL 413 (477)
Q Consensus 349 ~~~~g~~~~~~l~~~~~~-~~~~~e~~l~~~ll~---~~gI~v~pg~~f~~~-----------~~~~~Rl~~~~~~~e~l 413 (477)
+...|-.+.+.+...... +.|.+..++...+.+ .+-+.+-|.+--+.. .++.+|+|++- |++
T Consensus 336 ~~g~g~vltF~~kgg~ea~~~fi~~l~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~aGv~~~~IRlSVGI---Ed~ 412 (426)
T COG2873 336 PKGAGAVLTFGVKGGYEAGKKFIDALKLFSHLANIGDARSLVIHPASTTHRQLSEEEQAAAGVTPDLIRLSVGI---EDI 412 (426)
T ss_pred cCCCceEEEEEecChHHHHHHHHHHHHHHHhhccccccceeEecCcccchhcCCHHHHHhcCCCCCcEEEEecc---CCH
Confidence 333445677777765322 234444455444332 223556676655432 36799999984 667
Q ss_pred HHHHHHHHHHHhh
Q 011801 414 QVALNRIAAFVQQ 426 (477)
Q Consensus 414 ~~~l~~l~~~~~~ 426 (477)
+.++.-|.+++++
T Consensus 413 ~DiiaDl~qAl~~ 425 (426)
T COG2873 413 DDIIADLEQALEA 425 (426)
T ss_pred HHHHHHHHHHHhc
Confidence 7778888777653
No 322
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.51 E-value=8.2e-12 Score=125.65 Aligned_cols=264 Identities=16% Similarity=0.182 Sum_probs=161.6
Q ss_pred CCcEEEeCChHHHHHHHHHHh-cCCC-CeEEEcCCCccchHHHHhhhCC-------cE-----EEEEeccCCCCcccCHH
Q 011801 111 PDRIVMGGGATGANELIMFCL-ANPG-DAFLVPSPYYAAFDRDLSWRTG-------VQ-----IVPVHCDISNNFKITRE 176 (477)
Q Consensus 111 ~~~i~~t~G~t~al~~i~~~l-~~~G-d~vlv~~P~y~~~~~~~~~~~g-------~~-----~~~v~~~~~~~f~i~~~ 176 (477)
.+.+++++++++|++.+++.. ..+| ++|+..+-+|++....+-..++ .. +..++ |. |.+
T Consensus 81 ~~~v~~~~SGseA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~------~~-d~~ 153 (364)
T PRK04013 81 YEYVYMGNSGTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIP------FN-DVE 153 (364)
T ss_pred CCEEEEeCchHHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEec------CC-CHH
Confidence 358999999999999998764 2345 8899999999886543322111 11 11122 11 567
Q ss_pred HHHHHHHHHHHhCCCeeEEEEeCCCCCccc-CCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccC
Q 011801 177 ALEAAYERAQEASINIKGLIITNPSNPLGT-TLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDC 255 (477)
Q Consensus 177 ~l~~~~~~~~~~~~~~k~vii~nP~NPtG~-~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~ 255 (477)
++++.+.+ ++++|++..-....|. ..+.+.+++|.++|+++|+++|+||+..++ -.+.. ...... +.
T Consensus 154 ~l~~~i~~------~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~~-~a~~~~----gv 221 (364)
T PRK04013 154 AAKEAITK------ETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKF-LAIEHY----KV 221 (364)
T ss_pred HHHHHhcC------CcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCch-hHHHhc----CC
Confidence 77777642 7888777654444554 456778999999999999999999999875 33332 222111 11
Q ss_pred CCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhcccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHH
Q 011801 256 NRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHN 335 (477)
Q Consensus 256 ~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~ 335 (477)
.+| +-+++|.+| .|+.+|.++...+. .. .....+|+ .++.+..++.+.|+--+- ++.+++.++.
T Consensus 222 ~PD----iv~~gK~lg-gG~P~~a~~~~~~~-~~-~~~~~T~~-gnp~~~aaa~a~l~~i~~-~~l~~~~~~~------- 285 (364)
T PRK04013 222 EPD----IVTMGKGIG-NGVPVSLTLTNFDV-ER-GKHGSTFG-GNPLACKAVAVTLRILRR-ERLVEKAGEK------- 285 (364)
T ss_pred CCC----EEEeccccc-CCceeEEEEecccc-cC-CCcCCCCC-cCHHHHHHHHHHHHHHHh-ccHHHHHHHH-------
Confidence 333 236699999 79999999886542 11 11112233 455555555555542110 1112222221
Q ss_pred HHHHHhhCCCeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccC-CHHHHH
Q 011801 336 FTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANM-DDDTLQ 414 (477)
Q Consensus 336 l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~-~~e~l~ 414 (477)
+ +.+..--+.-. ..-|+++-+++... ...+.+.++ ++||++.+. +.+.+|+..... ++++++
T Consensus 286 l-~~l~~~~v~~v-RG~Gl~~gve~~~~--------~~~i~~~~~-~~Gll~~~~------g~~vlr~~Ppl~it~~~i~ 348 (364)
T PRK04013 286 F-IEIKGERVVTT-RGRGLMIGIVLKKP--------VGKYVEELQ-NRGYLVHTA------GQRVIRLLPPLIISKDTME 348 (364)
T ss_pred H-HHhccCcceee-eeCcEEEEEEeCCc--------HHHHHHHHH-hCCcEEeeC------CCCEEEEeCCcccCHHHHH
Confidence 1 12222111112 23468888888631 113555555 469998753 246799998764 999999
Q ss_pred HHHHHHHHHHhh
Q 011801 415 VALNRIAAFVQQ 426 (477)
Q Consensus 415 ~~l~~l~~~~~~ 426 (477)
+++++|.+.+++
T Consensus 349 ~~~~~l~~~l~~ 360 (364)
T PRK04013 349 EAKSAIEGVIND 360 (364)
T ss_pred HHHHHHHHHHHH
Confidence 999999999865
No 323
>PRK07046 aminotransferase; Validated
Probab=99.51 E-value=1.5e-11 Score=127.38 Aligned_cols=332 Identities=13% Similarity=0.089 Sum_probs=182.3
Q ss_pred CCCCccccccccc--cccc--cHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCcc
Q 011801 34 TQNPGGVIQLGLA--ENQL--CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTF 109 (477)
Q Consensus 34 ~~~~~~~i~l~~~--~n~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~ 109 (477)
+...+..||+..+ .+.+ +.+.+.+.+.+.-+ ....+.. ..+....+|+.+.+..
T Consensus 71 D~DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~-------------~~~~~~~---~~~~~~~lAe~l~~~~------ 128 (453)
T PRK07046 71 DVDGHRYDDFCLGDTGAMFGHSPAPVARALAEQAR-------------RGLTTML---PSEDAAWVGEELARRF------ 128 (453)
T ss_pred eCCCCEEEEecccccccccCCCCHHHHHHHHHHHH-------------hCCCCCC---CCHHHHHHHHHHHHHh------
Confidence 4445667887544 3333 34666666665311 1111111 1244555666555432
Q ss_pred CCCcEEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCccchHHHHhh--hCC----------c------EEEEEeccCCC
Q 011801 110 DPDRIVMGGGATGANELIMFCLA--NPGDAFLVPSPYYAAFDRDLSW--RTG----------V------QIVPVHCDISN 169 (477)
Q Consensus 110 ~~~~i~~t~G~t~al~~i~~~l~--~~Gd~vlv~~P~y~~~~~~~~~--~~g----------~------~~~~v~~~~~~ 169 (477)
..+.+.+++++++|.+.+++.-. ...++|+...-+|++.....-. ..+ . .++.++
T Consensus 129 ~~~~v~F~nSGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----- 203 (453)
T PRK07046 129 GLPYWQVATTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVE----- 203 (453)
T ss_pred CCCEEEEECCHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeC-----
Confidence 24789999999999999887632 2236788888888886422111 001 0 011111
Q ss_pred CcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccC-CCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHH
Q 011801 170 NFKITREALEAAYERAQEASINIKGLIITNPSNPLGTT-LDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAE 248 (477)
Q Consensus 170 ~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~-~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~ 248 (477)
|+ |++++++.+.. .++.+|++.--....|.+ .+.+-+++|.++|+++|+++|.||+.. +..+-.. ..+
T Consensus 204 -~n-d~~~l~~~l~~-----~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g~Gg---~~~ 272 (453)
T PRK07046 204 -FN-DLAALEAALAD-----GDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSGPGG---YTR 272 (453)
T ss_pred -CC-CHHHHHHHhCC-----CCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccCCcc---hhH
Confidence 22 67888887742 367766664223334544 456679999999999999999999986 2111111 112
Q ss_pred hhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHh------------cccCCCchHHHHHHHHhcC---
Q 011801 249 VIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKM------------SSFGLVSSQTQYLLASMLS--- 313 (477)
Q Consensus 249 ~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~------------~~~~~vs~~~q~~~~~~L~--- 313 (477)
.. +..+| + -+++|.+| .|+.+|.+++.++ +.+..... ..|+ .++++..++.+.|+
T Consensus 273 ~~---gv~PD--i--~t~gK~lg-gG~Pi~av~g~~~-i~~~~~~~~~~~~~~~~~~~~T~~-gnpl~~aa~~a~L~~l~ 342 (453)
T PRK07046 273 AH---GLEPD--F--LVVGKPIA-GGVPCAVYGFSAE-LAERAQAAKASAPPGHSGIGTTLS-ANALAMAAMRATLAEVM 342 (453)
T ss_pred Hh---CCCcc--c--eeehhhhc-CCCcceeeeehHH-HHHHHhhccccCCCCCceeCCCCc-ccHHHHHHHHHHHHHHh
Confidence 11 12334 2 26899999 8999999998554 44443210 1122 45555555555443
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccc-hhhc-----c--CchHHHHHHHHHHHhcCe
Q 011801 314 DDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRH-LLKE-----K--TLEGEIALWRTIVNDVKL 385 (477)
Q Consensus 314 ~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~-~~~~-----~--~~~~e~~l~~~ll~~~gI 385 (477)
.++. -+.+.+.-+++++ .|.+.+.+.++...-..-|..+.+.+.. .... . ...-...++..+++ +||
T Consensus 343 ~~~~-~~~~~~~g~~l~~---~L~~l~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gv 417 (453)
T PRK07046 343 TEAA-YAHMLALAARLAA---GLRAVIARHGLPWHVTRVGARVEFQFAPTPPRNGAEAAAALDPELEAALHLYLLN-RGV 417 (453)
T ss_pred cccH-HHHHHHHHHHHHH---HHHHHHHhCCCCeEEEEeCcEEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHH-CCC
Confidence 3332 1222333333332 2333334455443222223334443321 1000 0 11112245556665 599
Q ss_pred EEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhh
Q 011801 386 NVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 386 ~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~ 426 (477)
.+.|.. +.++++.+ +++++++++++++.+++++
T Consensus 418 ~~~~~~-------~~~~~~p~-~t~~did~~~~~~~~~l~~ 450 (453)
T PRK07046 418 LITPFH-------NMMLVCPA-TTAADVDRLVAAFDACLGE 450 (453)
T ss_pred EEeccc-------CcEEEeCC-CCHHHHHHHHHHHHHHHHH
Confidence 997631 34788876 6999999999999999865
No 324
>PRK06105 aminotransferase; Provisional
Probab=99.51 E-value=2.4e-11 Score=126.38 Aligned_cols=349 Identities=12% Similarity=0.058 Sum_probs=187.5
Q ss_pred CCCCccccccccc--cccc--cHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCcc
Q 011801 34 TQNPGGVIQLGLA--ENQL--CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTF 109 (477)
Q Consensus 34 ~~~~~~~i~l~~~--~n~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~ 109 (477)
+.+.+..||+..+ .+.+ +.+.+.+++.+.-+. ......+.. ...+.+.++|+.+.+... -
T Consensus 44 D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~----------~~~~~~~~~--~~~~~~~~lae~L~~~~p----~ 107 (460)
T PRK06105 44 DDAGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKK----------LPFYHTFSH--KSHGPVIDLAEKLVAMAP----V 107 (460)
T ss_pred ECCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHh----------CCCeecccc--cCCHHHHHHHHHHHHhCC----C
Confidence 4455678998654 3444 345566666553110 000001111 123444455555544321 1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhc------C-CC-CeEEEcCCCccchHHHHhhhCCcE------------EEEEeccCCC
Q 011801 110 DPDRIVMGGGATGANELIMFCLA------N-PG-DAFLVPSPYYAAFDRDLSWRTGVQ------------IVPVHCDISN 169 (477)
Q Consensus 110 ~~~~i~~t~G~t~al~~i~~~l~------~-~G-d~vlv~~P~y~~~~~~~~~~~g~~------------~~~v~~~~~~ 169 (477)
+-+++++++++++|++.+++... . +| .+|+...-+|++.....-..++.. +..++.....
T Consensus 108 ~~~~v~f~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~ 187 (460)
T PRK06105 108 PMSKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYY 187 (460)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCccc
Confidence 23689999999999999998731 1 22 578888888877653321111211 1112211000
Q ss_pred Ccc-----------cCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccC-CCHHHHHHHHHHHHhcCeEEEecccccccc
Q 011801 170 NFK-----------ITREALEAAYERAQEASINIKGLIITNPSNPLGTT-LDRDTLKSLVSFINDKNIHLVCDEIYAATV 237 (477)
Q Consensus 170 ~f~-----------i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~-~~~~~l~~l~~~~~~~~~~lI~De~y~~~~ 237 (477)
.+. ...+++++.+... ...++.+|++.--..-.|.. .+.+-+++|.++|+++|+++|+||++.++.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~le~~~~~~--~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~G 265 (460)
T PRK06105 188 RFGLPGESEEAFATRLANELEALILAE--GPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFG 265 (460)
T ss_pred ccccCCCChHHHHHHHHHHHHHHHHHc--CCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCC
Confidence 000 0134556555421 12367776665334555665 578889999999999999999999998753
Q ss_pred cCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCC-ceEEEEEeCCHHHHHHHHHh---------cccCCCchHHHHH
Q 011801 238 FSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPG-FRVGIVYSFNDTVVNCGRKM---------SSFGLVSSQTQYL 307 (477)
Q Consensus 238 ~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G-~RvG~i~~~~~~i~~~~~~~---------~~~~~vs~~~q~~ 307 (477)
-.+..+ .. +. .+..+| +-+++|.+| .| +.+|.+++.++ +.+..... .+-...++++..+
T Consensus 266 RtG~~f-~~-~~---~~v~PD----i~~~gK~lg-gG~~P~~av~~~~~-i~~~~~~~~~~~~~~~h~~T~~gnpl~~aa 334 (460)
T PRK06105 266 RTGNMF-GC-ET---FGIKPD----ILVMSKQLS-SSYQPLSAVLMNEK-VYDPIADESGKIGTFGHGFTASGHPVAAAV 334 (460)
T ss_pred cCchhh-hH-Hh---cCCCCC----eeeeecccc-cCcccceEEEEcHH-HHHHHhcccccCcccccCCCCCCCHHHHHH
Confidence 334322 21 11 122344 337899998 67 68999999654 44443321 1111245555555
Q ss_pred HHHhcC---ChhhHHHHHHHHHHHHHHHHHHHHHHHhh---CCCeEecCCceEEEEeeccchhhcc-Cc---hH-HHHHH
Q 011801 308 LASMLS---DDEFVDNFLVETSKRLAKRHHNFTKGLEQ---VGINCLKSNAGLFFWMDLRHLLKEK-TL---EG-EIALW 376 (477)
Q Consensus 308 ~~~~L~---~~~~~~~~~~~~~~~l~~r~~~l~~~L~~---~gi~~~~~~~g~~~~~~l~~~~~~~-~~---~~-e~~l~ 376 (477)
+.+.|+ +.++ .++.++.-++|.++|.+ .++...-..-|+++-+++....... .+ .. ...+.
T Consensus 335 a~a~L~~i~~~~l--------~~~v~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~ 406 (460)
T PRK06105 335 ALENLAIIEERDL--------VGNAAERGARLQARLRALADHPLVGEVRGVGLIAAVELVADKATKTPFEPPGKVGARAN 406 (460)
T ss_pred HHHHHHHHHhccH--------HHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccCCCCCchhHHHHHHH
Confidence 444443 3332 22222333333333333 3322222344677777764211110 01 11 12355
Q ss_pred HHHHHhcCeEEeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHhhh
Q 011801 377 RTIVNDVKLNVSPGSSFQCTEPGWFRVCFAN-MDDDTLQVALNRIAAFVQQD 427 (477)
Q Consensus 377 ~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~-~~~e~l~~~l~~l~~~~~~~ 427 (477)
..++ ++||++.|. .+.+|++... +++++++++++++.+++++.
T Consensus 407 ~~~~-~~Gvl~~~~-------g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 450 (460)
T PRK06105 407 AAAH-EHGVISRAM-------GDTLAFCPPLIITAAQVDEMVDRFGRALDDV 450 (460)
T ss_pred HHHH-HCCeEEEec-------CCEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 5555 569999863 1379999876 49999999999999999763
No 325
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.50 E-value=2.8e-11 Score=125.86 Aligned_cols=292 Identities=13% Similarity=0.100 Sum_probs=166.3
Q ss_pred CCcEEEeCChHHHHHHHHHHhcC-------CC-CeEEEcCCCccchHHHHhhhCCcE------------EEEEeccCCC-
Q 011801 111 PDRIVMGGGATGANELIMFCLAN-------PG-DAFLVPSPYYAAFDRDLSWRTGVQ------------IVPVHCDISN- 169 (477)
Q Consensus 111 ~~~i~~t~G~t~al~~i~~~l~~-------~G-d~vlv~~P~y~~~~~~~~~~~g~~------------~~~v~~~~~~- 169 (477)
.+++++++++++|++.+++.... +| .+|+...-+|++....+-..+|.. +..++.....
T Consensus 129 ~~~v~f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~ 208 (472)
T PRK08742 129 LSKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYL 208 (472)
T ss_pred CCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccc
Confidence 35899999999999999876421 22 578888988887653322221211 1222221000
Q ss_pred -Cccc--------CHHHHHHHHHHHHHhCCCeeEEEEeC-CCCCccc-CCCHHHHHHHHHHHHhcCeEEEeccccccccc
Q 011801 170 -NFKI--------TREALEAAYERAQEASINIKGLIITN-PSNPLGT-TLDRDTLKSLVSFINDKNIHLVCDEIYAATVF 238 (477)
Q Consensus 170 -~f~i--------~~~~l~~~~~~~~~~~~~~k~vii~n-P~NPtG~-~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~ 238 (477)
.+.. +++.+++.+++ ...++.+|++.- ...-.|. ..+++-+++|.++|+++|+++|.||+..++..
T Consensus 209 ~~~~~~~~~~~~~~~~~l~~~~~~---~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGR 285 (472)
T PRK08742 209 AEPGQSAEDYALQAADALQALFEQ---SPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGR 285 (472)
T ss_pred cccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCC
Confidence 0111 23455555542 234677766653 2455676 45777899999999999999999999987644
Q ss_pred CCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCc-eEEEEEeCCHHHHHHHHH--------h-cccCCCchHHHHHH
Q 011801 239 SSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGF-RVGIVYSFNDTVVNCGRK--------M-SSFGLVSSQTQYLL 308 (477)
Q Consensus 239 ~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~-RvG~i~~~~~~i~~~~~~--------~-~~~~~vs~~~q~~~ 308 (477)
.+..+.. +. .+..+| ++ +++|.+| .|+ .+|.+++.++ +.+.... . .+|+ .++++..++
T Consensus 286 tG~~~a~--e~---~gv~PD--iv--~~gKgl~-gG~~Plaav~~~~e-i~~~~~~~~~~~~~~h~~T~~-gnpl~~Aaa 353 (472)
T PRK08742 286 TGTLFAC--EQ---AGVMPD--LL--CLSKGLT-GGFLPLSAVLATQQ-LYDAFLDDSRERAFLHSHSYT-GNPLACAAA 353 (472)
T ss_pred CccchHH--Hh---cCCCCC--EE--EEccccc-CCCCCcceeeccHH-HHHHhhccCccCccCcCCCCC-ccHHHHHHH
Confidence 4433221 11 122334 22 5689998 884 9999999554 4333321 0 1222 455555555
Q ss_pred HHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchhhccC-chHH----HHHHHHHHHhc
Q 011801 309 ASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKT-LEGE----IALWRTIVNDV 383 (477)
Q Consensus 309 ~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~~~-~~~e----~~l~~~ll~~~ 383 (477)
.+.|+--+ ++.+.++.+++.++...+.+.+.++.+-..-..-|+++-+.+.......+ +..+ ..+.+.++ +.
T Consensus 354 ~a~L~~i~--~~~l~~~~~~~g~~l~~~~~~~~~~~~i~dvRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 430 (472)
T PRK08742 354 LATLDIFA--DDDVIARNQPTAARMTQLAAQIGEHPHVADVRQAGMVVAFELTRGGNKRTPFPPAARVGLHAYRAAL-AR 430 (472)
T ss_pred HHHHHHHH--HCCHHHHHHHHHHHHHHHHHHHhcCCCeeeEeccceEEEEEeccCccccccCCchhHHHHHHHHHHH-HC
Confidence 55554211 11122222222333233444444444321223456788887753211111 1111 23444455 56
Q ss_pred CeEEeCCCCCCCCCCCEEEEEeccC-CHHHHHHHHHHHHHHHhhh
Q 011801 384 KLNVSPGSSFQCTEPGWFRVCFANM-DDDTLQVALNRIAAFVQQD 427 (477)
Q Consensus 384 gI~v~pg~~f~~~~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~~~ 427 (477)
||++.+. .+.+|+..... +++++++++++|.+.+++.
T Consensus 431 Gll~~~~-------g~vi~~~PpL~it~~ei~~~~~~l~~~l~~~ 468 (472)
T PRK08742 431 GVVLRPL-------GDVLYWMPPYCVDEAQLALLADTTRHAIDEA 468 (472)
T ss_pred CeEEEec-------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999763 14799988764 9999999999999999763
No 326
>PRK15029 arginine decarboxylase; Provisional
Probab=99.50 E-value=7e-12 Score=134.99 Aligned_cols=177 Identities=16% Similarity=0.156 Sum_probs=127.9
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccC
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDI 167 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~ 167 (477)
..+..+..|+.++ .....++++|+|.++.+++.+++.+||.|||+.-++-.....+.+. |++.+.+...-
T Consensus 207 I~eAq~~aA~~fg---------A~~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~L~-ga~Pvyl~P~~ 276 (755)
T PRK15029 207 FGESEKYAARVFG---------ADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLILT-GAKPVYMVPSR 276 (755)
T ss_pred HHHHHHHHHHHhC---------CCcEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHc-CCeEEEecccc
Confidence 5677777777776 2356889999999999999999999999999999999998888877 99988886432
Q ss_pred CCCcc----cC-----HHHHHHHHHHHHH----hCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEeccccc
Q 011801 168 SNNFK----IT-----REALEAAYERAQE----ASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYA 234 (477)
Q Consensus 168 ~~~f~----i~-----~~~l~~~~~~~~~----~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~ 234 (477)
+.++ ++ ++.+++++++... .+.+++++++++| +-.|.+.+ +++|++.|+++++.|++||+|.
T Consensus 277 -~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~P-TY~Gv~~d---i~~I~~~~h~~~~~llvDEAhG 351 (755)
T PRK15029 277 -NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYN---AKEAQDLLEKTSDRLHFDEAWY 351 (755)
T ss_pred -cccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECC-CCcceeeC---HHHHHHHHHhcCCeEEEECccc
Confidence 2332 34 8899999875421 2345669999998 56899999 8889999999999999999998
Q ss_pred ccc-cCCCCcccHHHhhhhccCCCCc-EEEEecCCcccCCCCceEE-EEEe
Q 011801 235 ATV-FSSPKFTSVAEVIQEMDCNRDL-IHIIYSLSKDMGLPGFRVG-IVYS 282 (477)
Q Consensus 235 ~~~-~~~~~~~s~~~~~~~~~~~~~~-viiv~SlSK~~g~~G~RvG-~i~~ 282 (477)
+.. |.. .+.....+-.+.....+. ++++.|.+|.+ |++.-| +|..
T Consensus 352 ah~~F~~-~~p~~sa~~~~~~~~~Gad~~vvqStHKtL--~alTQaS~LHv 399 (755)
T PRK15029 352 GYARFNP-IYADHYAMRGEPGDHNGPTVFATHSTHKLL--NALSQASYIHV 399 (755)
T ss_pred cccccCc-cccccccccccccccCCCceEEEEchhhcc--cchhhhhhhee
Confidence 752 332 222111110000000123 48899999998 666655 4555
No 327
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.49 E-value=2.8e-11 Score=124.48 Aligned_cols=341 Identities=12% Similarity=0.050 Sum_probs=187.6
Q ss_pred CCCCccccccccc--cccc--cHHHHHHHHHhCCCCcccccccccccccccccCCC-CCcHHHHHHHHHHHhcccCCCCc
Q 011801 34 TQNPGGVIQLGLA--ENQL--CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDY-HGLPEFRQAVAKFMGKGRGGRVT 108 (477)
Q Consensus 34 ~~~~~~~i~l~~~--~n~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~-~G~~~lr~aia~~~~~~~g~~~~ 108 (477)
+.+.+..||+..+ .+.+ +.+.+.+.+++.-+ .+. |... .-..+.+..+|+.+.+..+
T Consensus 39 D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~-------------~~~-~~~~~~~~~~~~~~la~~L~~~~p---- 100 (428)
T PRK07986 39 LADGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQID-------------AMS-HVMFGGITHPPAIELCRKLVAMTP---- 100 (428)
T ss_pred eCCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHh-------------hcC-CccccccCCHHHHHHHHHHHhhCC----
Confidence 3445667887543 3333 34667776665321 111 1100 0012445556665554321
Q ss_pred cCCCcEEEeCChHHHHHHHHHHhc-------CCCCeEEEcCCCccchHHHHhhhCCc-------------EEEEEeccCC
Q 011801 109 FDPDRIVMGGGATGANELIMFCLA-------NPGDAFLVPSPYYAAFDRDLSWRTGV-------------QIVPVHCDIS 168 (477)
Q Consensus 109 ~~~~~i~~t~G~t~al~~i~~~l~-------~~Gd~vlv~~P~y~~~~~~~~~~~g~-------------~~~~v~~~~~ 168 (477)
-..+++++++++++|++.+++... ....+|+...-+|++....+...++. .++.++....
T Consensus 101 ~~~~~v~f~~SGsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~ 180 (428)
T PRK07986 101 QPLECVFLADSGSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQS 180 (428)
T ss_pred CCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCc
Confidence 123689999999999999887632 12367999998888754222111121 0111221100
Q ss_pred ---CCc-ccCHHHHHHHHHHHHHhCCCeeEEEEeCC-CCCccc-CCCHHHHHHHHHHHHhcCeEEEecccccccccCCCC
Q 011801 169 ---NNF-KITREALEAAYERAQEASINIKGLIITNP-SNPLGT-TLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPK 242 (477)
Q Consensus 169 ---~~f-~i~~~~l~~~~~~~~~~~~~~k~vii~nP-~NPtG~-~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~ 242 (477)
..| .-|++++++.++. .+.++.+|++... +.-.|. ..+.+.+++|.++|+++|+++|+||++.++.-.+..
T Consensus 181 ~~~~~~~~~d~~~l~~~l~~---~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~ 257 (428)
T PRK07986 181 RFDGEWDERDIAPFARLMAA---HRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKL 257 (428)
T ss_pred ccchhhHHHHHHHHHHHHHh---CCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCe
Confidence 001 1145666666653 2335666555532 444565 446788999999999999999999999764333332
Q ss_pred cccHHHhhhhccCCCCcEEEEecCCcccCCCC-ceEEEEEeCCHHHHHHHHHh--------cccCCCchHHHHHHHHhcC
Q 011801 243 FTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPG-FRVGIVYSFNDTVVNCGRKM--------SSFGLVSSQTQYLLASMLS 313 (477)
Q Consensus 243 ~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G-~RvG~i~~~~~~i~~~~~~~--------~~~~~vs~~~q~~~~~~L~ 313 (477)
+.. +. .+..+| ++ +|+|.+| .| +.+|.++++++ +.+.+... .+|+ .++++.+++.+.|+
T Consensus 258 fa~--~~---~gv~PD--i~--t~gK~l~-gG~~p~~av~~~~~-i~~~~~~~~~~~~~~~~T~~-g~p~~~aaa~a~L~ 325 (428)
T PRK07986 258 FAC--EH---AGIAPD--IL--CLGKALT-GGTMTLSATLTTRE-VAETISNGEAGCFMHGPTFM-GNPLACAVANASLS 325 (428)
T ss_pred eee--cc---cCCCCC--EE--Eechhhh-CCcccCcchhchHH-HHHHhhcCCCCccccCCCCC-cCHHHHHHHHHHHH
Confidence 211 11 111333 33 6899998 88 58888888554 44444321 2222 45555555555443
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEe--cCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCC
Q 011801 314 DDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCL--KSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPG 390 (477)
Q Consensus 314 ~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~--~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg 390 (477)
--+ +. +..++++++-+++.+.|+++ ..... -...|+++-+.+..... ...++..++ ++||.+.+.
T Consensus 326 ~i~--~~---~~~~~~~~~g~~l~~~l~~l~~~~~i~~vRg~Gl~~~ve~~~~~~------~~~~~~~l~-~~Gl~~~~~ 393 (428)
T PRK07986 326 LLE--SG---DWQQQVAAIEAQLREELAPLRDAPMVADVRVLGAIGVVETTRPVN------MAALQRFFV-EQGVWIRPF 393 (428)
T ss_pred HHH--hC---CHHHHHHHHHHHHHHHHHHHhcCCCEEeEeccceEEEEEeCCccc------HHHHHHHHH-HCCcEEEec
Confidence 211 00 12233334444455555443 11111 12346777777753211 123555555 569999864
Q ss_pred CCCCCCCCCEEEEEeccC-CHHHHHHHHHHHHHHHhh
Q 011801 391 SSFQCTEPGWFRVCFANM-DDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 391 ~~f~~~~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~~ 426 (477)
. ..+|++.... +++++++++++|.+++.+
T Consensus 394 g-------~~i~~~Ppl~it~~ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 394 G-------KLIYLMPPYIILPEQLQRLTAAVNRAVQD 423 (428)
T ss_pred C-------CEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 1 3799987654 999999999999999865
No 328
>PRK12403 putative aminotransferase; Provisional
Probab=99.49 E-value=5.5e-11 Score=123.68 Aligned_cols=291 Identities=12% Similarity=0.120 Sum_probs=156.3
Q ss_pred CCcEEEeCChHHHHHHHHHHhc-------CCCCe-EEEcCCCccchHHHHhhhCCcE-----------EEEEeccC--CC
Q 011801 111 PDRIVMGGGATGANELIMFCLA-------NPGDA-FLVPSPYYAAFDRDLSWRTGVQ-----------IVPVHCDI--SN 169 (477)
Q Consensus 111 ~~~i~~t~G~t~al~~i~~~l~-------~~Gd~-vlv~~P~y~~~~~~~~~~~g~~-----------~~~v~~~~--~~ 169 (477)
.+.+++++++++|++.+++... ++++. |+...-+|++.....-..+|.+ +..++... ..
T Consensus 115 ~~~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~ 194 (460)
T PRK12403 115 YSHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYAN 194 (460)
T ss_pred cCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCccccc
Confidence 3689999999999999998763 23333 4455567776532221111221 22222110 00
Q ss_pred CcccC--------HHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccC-CCHHHHHHHHHHHHhcCeEEEecccccccccCC
Q 011801 170 NFKIT--------REALEAAYERAQEASINIKGLIITNPSNPLGTT-LDRDTLKSLVSFINDKNIHLVCDEIYAATVFSS 240 (477)
Q Consensus 170 ~f~i~--------~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~-~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~ 240 (477)
++.+. .+.+++.+.+. ...++.+|++.--..-.|.+ .+.+-+++|.++|++||+++|+||+..++.-.+
T Consensus 195 ~~~~~~~~~~~~~~~~le~~~~~~--~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG 272 (460)
T PRK12403 195 GGELTPAEFGRRAALQLEEKILEL--GAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTG 272 (460)
T ss_pred ccCCChHHHHHHHHHHHHHHHHHh--CCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc
Confidence 01111 23444444321 12356666654334455765 466779999999999999999999997653333
Q ss_pred CCcccHHHhhhhccCCCCcEEEEecCCcccCCCCc-eEEEEEeCCHHHHHHHHHh-------cccCCCchHHHHHHHHhc
Q 011801 241 PKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGF-RVGIVYSFNDTVVNCGRKM-------SSFGLVSSQTQYLLASML 312 (477)
Q Consensus 241 ~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~-RvG~i~~~~~~i~~~~~~~-------~~~~~vs~~~q~~~~~~L 312 (477)
..+.. +. .+..+| ++ +++|.+| .|+ .+|.+++.+ .+.+.+... .+|+ .++.+..++.+.|
T Consensus 273 ~~~a~--e~---~gv~PD--iv--~~gK~lg-gG~~Piga~v~~~-~i~~~~~~~~~~~~~~~T~~-gnPl~~Aaala~L 340 (460)
T PRK12403 273 EWFAH--EH---FGFEPD--TL--SIAKGLT-SGYVPMGGLVLSK-RIAEALVEQGGVFAHGLTYS-GHPVAAAVAIANL 340 (460)
T ss_pred hhhhh--hh---cCCCCC--eE--EEccccc-ccccceEEEEECH-HHHHHHhcCCCccccCCCCC-CCHHHHHHHHHHH
Confidence 32211 11 122333 33 5899998 785 999998854 454444211 1222 4555555555555
Q ss_pred C---ChhhHHHHHH-HHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchhhc-cCchH----HHHHHHHHHHhc
Q 011801 313 S---DDEFVDNFLV-ETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKE-KTLEG----EIALWRTIVNDV 383 (477)
Q Consensus 313 ~---~~~~~~~~~~-~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~-~~~~~----e~~l~~~ll~~~ 383 (477)
+ +.+++ +.+. +..+++++ .|.+..++.++...-..-|+++.+.+...... ..+.. ...++..++ +.
T Consensus 341 ~~i~~~~l~-~~~~~~~g~~l~~---~L~~l~~~~~~i~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 415 (460)
T PRK12403 341 KALRDEGVV-TRVKDDTGPYLQR---CLREVFGDHPLVGEVQGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGF-EE 415 (460)
T ss_pred HHHHhccHH-HHHHHHHHHHHHH---HHHHHHhcCCCEEeEeecceEEEEEEccCccccccccchhHHHHHHHHHHH-hC
Confidence 3 22221 1111 22222222 22222233443222334567887877531110 11111 112223334 56
Q ss_pred CeEEeCCCCCCCCCCCEEEEEeccC-CHHHHHHHHHHHHHHHhhh
Q 011801 384 KLNVSPGSSFQCTEPGWFRVCFANM-DDDTLQVALNRIAAFVQQD 427 (477)
Q Consensus 384 gI~v~pg~~f~~~~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~~~ 427 (477)
||.+.+.. +.+|++.+.. ++++++++++++.+++.+.
T Consensus 416 Gll~~~~~-------~~~~l~Ppl~it~~eid~~~~~l~~al~~~ 453 (460)
T PRK12403 416 GVIIRSTL-------GRMIMAPALVAGRAEIDELVDKTRIAVDRT 453 (460)
T ss_pred CEEEEecC-------CEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99997531 3488988764 9999999999999999764
No 329
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.49 E-value=2.6e-11 Score=134.66 Aligned_cols=309 Identities=15% Similarity=0.139 Sum_probs=184.9
Q ss_pred CCcHHHHHHHHHHHhcccCCCCccCCCcEEEeC-ChHHHHHHHHHHh----cCCCC----eEEEcCCCccchHHHHhhhC
Q 011801 86 HGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGG-GATGANELIMFCL----ANPGD----AFLVPSPYYAAFDRDLSWRT 156 (477)
Q Consensus 86 ~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~-G~t~al~~i~~~l----~~~Gd----~vlv~~P~y~~~~~~~~~~~ 156 (477)
+|..++...+.+++.+..| . +++.+.. |+++|....+.++ .++|+ .|++++-.|+.....+...
T Consensus 538 qG~l~~i~e~q~~l~eltG----~--d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~- 610 (954)
T PRK05367 538 AGYRELIDQLEAWLAEITG----Y--DAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMA- 610 (954)
T ss_pred HHHHHHHHHHHHHHHHHHC----C--CCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHC-
Confidence 4566788888888887766 2 3555544 5656554433332 25666 5999999997776677766
Q ss_pred CcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEeccccccc
Q 011801 157 GVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAAT 236 (477)
Q Consensus 157 g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~ 236 (477)
|++++.++++.. ..+|+++|++++++. +.++.+|++++|++-.+...+ +++|+++|+++|+++++|.++...
T Consensus 611 G~~vv~v~~d~~--G~iD~~~L~~~i~~~---~~~la~V~it~pst~G~~e~~---I~eI~~i~h~~G~~v~VDgA~~~a 682 (954)
T PRK05367 611 GMKVVVVACDEN--GNIDLDDLRAKAEEH---ADNLAAIMITYPSTHGVFEET---IREICEIVHEHGGQVYLDGANMNA 682 (954)
T ss_pred CCEEEEECCCCC--CCcCHHHHHHHHhcc---CCCeEEEEEEcCCCCeeecCC---HHHHHHHHHHcCCEEEEECcChhh
Confidence 999999998743 479999999988642 236888899999876444456 899999999999999999999632
Q ss_pred ccCCCCcccHHHhhhhccCCCCcEEEEecCCcccC----CCCceEEEEEeCCHHHHHHHHHh--------cccCCCc--h
Q 011801 237 VFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMG----LPGFRVGIVYSFNDTVVNCGRKM--------SSFGLVS--S 302 (477)
Q Consensus 237 ~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g----~~G~RvG~i~~~~~~i~~~~~~~--------~~~~~vs--~ 302 (477)
...- .+.. ..+..+++.|++|.|+ ..|-.+|.+++.. .+...+... ...+.++ .
T Consensus 683 l~~l---~~pg--------~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~-~l~p~lpg~~v~~~~~~~~~g~v~ta~ 750 (954)
T PRK05367 683 QVGL---ARPG--------DIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKA-HLAPFLPGHPVQIAGGETGIGAVSAAP 750 (954)
T ss_pred ccCC---CChh--------hcCCCEEEecCcccCCCCcCCCCCceEEEeecc-cccccCCCCccCcCCCCCCcCcchhHH
Confidence 1211 1111 1234477889999975 2345588888743 222211110 0012222 2
Q ss_pred HHHHHHH----HhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEecCCceE--EEEeeccchhhccCchHHHHH
Q 011801 303 QTQYLLA----SMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLKSNAGL--FFWMDLRHLLKEKTLEGEIAL 375 (477)
Q Consensus 303 ~~q~~~~----~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~~~~g~--~~~~~l~~~~~~~~~~~e~~l 375 (477)
..|..++ .++..-. .+-+++..++.-.+.+++.+.|++. ++.+..+.+-. =+.++++......... ..++
T Consensus 751 ~g~al~~~~a~~yi~~~G--~~Glr~~a~~~~~~A~Yl~~~L~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~g~~-~~di 827 (954)
T PRK05367 751 FGSASILPISWMYIRMMG--AEGLRQATEVAILNANYIAKRLKDHYPVLYTGANGRVAHECILDLRPLKESTGIT-VDDI 827 (954)
T ss_pred HHHHHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCcccceEEEeecccccCCCC-HHHH
Confidence 2222111 1111111 1224444444446677888888663 33332221100 1234443221111112 2357
Q ss_pred HHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccC-CHHHHHHHHHHHHHHHhhhh
Q 011801 376 WRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANM-DDDTLQVALNRIAAFVQQDK 428 (477)
Q Consensus 376 ~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~~~~ 428 (477)
.+++ .++|+...- ..|. .++.+||++.-. +.+++|+++++|+.+.++..
T Consensus 828 ~krL-~d~G~~~~t-~~~p--v~~~l~i~ptE~~s~~elDr~~~al~~i~~e~~ 877 (954)
T PRK05367 828 AKRL-IDYGFHAPT-MSFP--VAGTLMVEPTESESKAELDRFCDAMIAIRAEID 877 (954)
T ss_pred HHHH-HHCCCeEee-cCCc--cCCEEEEEeeecCCHHHHHHHHHHHHHHHHHHH
Confidence 7777 466998643 3342 367899988765 89999999999998876544
No 330
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.48 E-value=8.9e-11 Score=121.24 Aligned_cols=339 Identities=12% Similarity=0.127 Sum_probs=182.9
Q ss_pred CCCCccccccccc--cccc--cHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCcc
Q 011801 34 TQNPGGVIQLGLA--ENQL--CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTF 109 (477)
Q Consensus 34 ~~~~~~~i~l~~~--~n~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~ 109 (477)
+.+.+..||+..+ .+.+ +.+.+.+.+++.-+ ....+... .+....+|+.+.+...
T Consensus 49 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~-------------~~~~~~~~---~~~~~~la~~l~~~~p----- 107 (428)
T PRK12389 49 DVDGNKYIDYLAAYGPIITGHAHPHITKAITEAAE-------------NGVLYGTP---TELEIEFAKMLKEAIP----- 107 (428)
T ss_pred eCCCCEEEEccccccccccCCCCHHHHHHHHHHHH-------------hCCccCCC---CHHHHHHHHHHHHhCC-----
Confidence 4556667888544 3334 34666666665321 11111111 2334555555543221
Q ss_pred CCCcEEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCccchHHHHhhhCCcEEEE--------Eecc-CCCCcc---cCH
Q 011801 110 DPDRIVMGGGATGANELIMFCLA--NPGDAFLVPSPYYAAFDRDLSWRTGVQIVP--------VHCD-ISNNFK---ITR 175 (477)
Q Consensus 110 ~~~~i~~t~G~t~al~~i~~~l~--~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~--------v~~~-~~~~f~---i~~ 175 (477)
..+++++++++++|++.+++.-. ....+|+...-+|++....+...+|..... ++.. ..+... -|+
T Consensus 108 ~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 187 (428)
T PRK12389 108 SLEKVRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDI 187 (428)
T ss_pred CCcEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCH
Confidence 24689999999999999987532 223678888888888654332221211100 0000 000000 167
Q ss_pred HHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCC-CHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhcc
Q 011801 176 EALEAAYERAQEASINIKGLIITNPSNPLGTTL-DRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMD 254 (477)
Q Consensus 176 ~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~-~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~ 254 (477)
+++++.+++. +.++.+|++.--..-.|.+. +.+.+++|.++|+++|+++|+||++.++.. .+....+.. +
T Consensus 188 ~~l~~~l~~~---~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt---~~~~a~~~~---g 258 (428)
T PRK12389 188 EALKEALDKW---GDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRF---MYGGAQDLL---G 258 (428)
T ss_pred HHHHHHHHhc---CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccccccc---CcchhhHHh---C
Confidence 8888887642 23576666654355567655 677899999999999999999999987521 111111111 1
Q ss_pred CCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHH-----h-cccCCCchHHHHHHHHhcC---ChhhHHHHHHHH
Q 011801 255 CNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRK-----M-SSFGLVSSQTQYLLASMLS---DDEFVDNFLVET 325 (477)
Q Consensus 255 ~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~-----~-~~~~~vs~~~q~~~~~~L~---~~~~~~~~~~~~ 325 (477)
..+| + -+++|.+| .|+.+|.+++++ .+.+.+.. . ..| ..++++..++.+.|+ +.++
T Consensus 259 v~PD--i--vt~gK~lg-gG~Pi~av~~~~-~i~~~~~~~~~~~~~~T~-~gnpl~~Aaala~L~~l~~~~l-------- 323 (428)
T PRK12389 259 VEPD--L--TALGKIIG-GGLPIGAYGGRK-DIMEQVAPLGPAYQAGTM-AGNPASMAAGIACLEVLQQEGV-------- 323 (428)
T ss_pred CCCC--e--eeechhhc-CCCceeEEeEHH-HHHhhhccCCCcccccCC-ccCHHHHHHHHHHHHHHhcccH--------
Confidence 2334 2 38899998 899999998854 44444321 1 122 245555555555543 3232
Q ss_pred HHHHHHHHHHHHHHHhh----CCCeEec-CCceEEEEeeccch-hhc------cCchHHHHHHHHHHHhcCeEEeCCCCC
Q 011801 326 SKRLAKRHHNFTKGLEQ----VGINCLK-SNAGLFFWMDLRHL-LKE------KTLEGEIALWRTIVNDVKLNVSPGSSF 393 (477)
Q Consensus 326 ~~~l~~r~~~l~~~L~~----~gi~~~~-~~~g~~~~~~l~~~-~~~------~~~~~e~~l~~~ll~~~gI~v~pg~~f 393 (477)
.+++++.-++|.+.|++ .++.... ...|++ -+.+... ... ........++..++ ++||.+.+..
T Consensus 324 ~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~~g~~-gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~-- 399 (428)
T PRK12389 324 YEKLDRLGAMLEEGILEAAEKHGITITINRLKGAL-TVYFTDEKVTNYDQAERSDGEAFGKFFKLML-NQGINLAPSK-- 399 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCcEE-EEEEeCCCCCChhhhcccCHHHHHHHHHHHH-HCCcEeecCC--
Confidence 22233333344444432 4432211 223443 2333211 000 00011124455555 5699998752
Q ss_pred CCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhh
Q 011801 394 QCTEPGWFRVCFANMDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 394 ~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~ 426 (477)
.+.+.+++. +++++++++++++++++++
T Consensus 400 ----~~~~~~~l~-~t~e~id~~~~~l~~~l~~ 427 (428)
T PRK12389 400 ----YEAWFLTTA-HTEEDIEETLEAVDRAFAQ 427 (428)
T ss_pred ----CCCeeecCC-CCHHHHHHHHHHHHHHHHh
Confidence 112345543 4999999999999998864
No 331
>PRK07481 hypothetical protein; Provisional
Probab=99.48 E-value=9.7e-11 Score=121.52 Aligned_cols=309 Identities=13% Similarity=0.080 Sum_probs=169.3
Q ss_pred HHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcC-------CC-CeEEEcCCCccchHHHHhhhCCc---
Q 011801 90 EFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLAN-------PG-DAFLVPSPYYAAFDRDLSWRTGV--- 158 (477)
Q Consensus 90 ~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~-------~G-d~vlv~~P~y~~~~~~~~~~~g~--- 158 (477)
+.+..+|+.+.+..+ +-.-+++++++++++|++.+++.-.. +| .+|+...-+|++....+...++.
T Consensus 86 ~~~~~lae~L~~~~~---~~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~ 162 (449)
T PRK07481 86 PRAIELSYELIDMFA---PEGMRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVF 162 (449)
T ss_pred HHHHHHHHHHHHhcC---CCCCCEEEEcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCccc
Confidence 444555555544321 01235899999999999999876321 33 57888888888754322111111
Q ss_pred ---------EEEEEeccCC--CCcc-cCHHHHHHHHH----HHH--HhCCCeeEEEEeCCCCCcccC-CCHHHHHHHHHH
Q 011801 159 ---------QIVPVHCDIS--NNFK-ITREALEAAYE----RAQ--EASINIKGLIITNPSNPLGTT-LDRDTLKSLVSF 219 (477)
Q Consensus 159 ---------~~~~v~~~~~--~~f~-i~~~~l~~~~~----~~~--~~~~~~k~vii~nP~NPtG~~-~~~~~l~~l~~~ 219 (477)
.+..++.+.. ..|. -|.+++++.+. +.. ....++.+|++.--..-.|.. .+.+-+++|.++
T Consensus 163 ~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~l 242 (449)
T PRK07481 163 RRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREV 242 (449)
T ss_pred ccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHH
Confidence 1122221110 0122 13444443332 111 112467776665434455664 567779999999
Q ss_pred HHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCC-ceEEEEEeCCHHHHHHHHH-----
Q 011801 220 INDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPG-FRVGIVYSFNDTVVNCGRK----- 293 (477)
Q Consensus 220 ~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G-~RvG~i~~~~~~i~~~~~~----- 293 (477)
|+++|+++|.||+..++...+..+.. +. .+..+| + -+++|.+| .| +.+|.+++.++ +.+....
T Consensus 243 c~~~g~llI~DEV~tGfGRtG~~~a~--~~---~gv~PD--i--v~~gKgl~-gG~~Pi~av~~~~~-i~~~~~~~~~~~ 311 (449)
T PRK07481 243 CDRHGILLIADEVVTGFGRTGSWFGS--RG---WGVKPD--I--MCLAKGIT-SGYVPLGATMVNAR-IADAFEANADFG 311 (449)
T ss_pred HHHcCCEEEEeehhhCcCcCchhhHh--hh---cCCCCC--E--EEEeeccc-CCCcCceEEEEcHH-HHHHHhccCccc
Confidence 99999999999999875333332211 11 122344 2 26689998 78 59999999654 4444321
Q ss_pred ----h-cccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhh----CCCeEecCCceEEEEeeccchh
Q 011801 294 ----M-SSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQ----VGINCLKSNAGLFFWMDLRHLL 364 (477)
Q Consensus 294 ----~-~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~----~gi~~~~~~~g~~~~~~l~~~~ 364 (477)
. .+|+ .++++..++.+.|+--+ ++ ...++.++.-+++.+.|++ .++......-|+++.+++....
T Consensus 312 ~~~~h~~T~~-gnpl~~aaa~a~L~~l~--~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Glm~gi~l~~~~ 385 (449)
T PRK07481 312 GAIMHGYTYS-GHPVACAAALATLDIVV--RE---DLPANAAKRGAYLLEGLQPLKERFELVGDVRGKGLMLALDLVADK 385 (449)
T ss_pred cccccCCCCC-CCHHHHHHHHHHHHHHH--hh---hHHHHHHHHHHHHHHHHHHHhhcCCCeEEEeecceEEEEEecccc
Confidence 0 1222 45666555555553211 11 1112223333334444433 3332222345678888774321
Q ss_pred hcc-Cc----hHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHhh
Q 011801 365 KEK-TL----EGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFAN-MDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 365 ~~~-~~----~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~-~~~e~l~~~l~~l~~~~~~ 426 (477)
... .. .....+...++ +.||++.+.. ..+|++.+. ++++++++++++|.+++++
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~g-------~~i~l~Ppl~it~~eid~~~~~l~~~l~~ 445 (449)
T PRK07481 386 ATREPIDPSKGYANAVADVAR-ENGVLVRPSG-------TKIILSPPLVIQREDVDRIVDALDAGLSA 445 (449)
T ss_pred cccCCCCchhHHHHHHHHHHH-hCCeEEEecC-------CEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 111 00 11123445554 4699998642 248998765 4999999999999999975
No 332
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.48 E-value=1.2e-11 Score=127.47 Aligned_cols=252 Identities=15% Similarity=0.168 Sum_probs=178.6
Q ss_pred CCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcC-----C---CC------eEEEcCCCccchHH
Q 011801 85 YHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLAN-----P---GD------AFLVPSPYYAAFDR 150 (477)
Q Consensus 85 ~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~-----~---Gd------~vlv~~P~y~~~~~ 150 (477)
+.+..++.+.+.+++.+..+.. +.-.-.+|.|+|+|+.+.+.+... . +. .|+++.-++..+..
T Consensus 96 ~p~a~~~E~~~v~~l~~l~~~~---~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~K 172 (460)
T COG0076 96 SPAAAELEERVVNMLSDLLGAP---EEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEK 172 (460)
T ss_pred ChhHHHHHHHHHHHHHHHhCCC---CCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHHH
Confidence 4478899999999999987732 334578899999999987766421 1 11 68899989999999
Q ss_pred HHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCee-EEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEe
Q 011801 151 DLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIK-GLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVC 229 (477)
Q Consensus 151 ~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k-~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~ 229 (477)
.++.. |++...++.+.. ++++|+++|++++.+. .+. +|+-+-++.+||.+=+ +++|.++|+++++++++
T Consensus 173 aa~~l-G~~~~~v~~~~~-~~~id~~~l~~~i~~~-----t~~g~vV~~aGtT~~G~iDd---i~~ia~ia~~~~i~lHV 242 (460)
T COG0076 173 AARYL-GLGLRRVPTVPT-DYRIDVDALEEAIDEN-----TIGGVVVGTAGTTDTGSIDD---IEELADIAEEYGIWLHV 242 (460)
T ss_pred HHHHh-CCCceeEEeccC-ccccCHHHHHHHHHhh-----ccCceEEEEecCCCCCccCC---HHHHHHHHHHcCCcEEE
Confidence 98887 999999998765 7899999999999874 222 3666777889999877 88899999999999999
Q ss_pred ccccccccc--CCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCH-HHHHHHHHhcccCC-------
Q 011801 230 DEIYAATVF--SSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFND-TVVNCGRKMSSFGL------- 299 (477)
Q Consensus 230 De~y~~~~~--~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~-~i~~~~~~~~~~~~------- 299 (477)
|.+|++++. ..+... .. .. .+...-+.-+++|.. +..+.+||++..++ .+.+......+++.
T Consensus 243 DAA~GG~~~pf~~~~~~--~~-f~----l~~vdSIt~d~HK~g-~aP~~~G~il~rd~e~l~~~~~~~~~yl~~~~~~~~ 314 (460)
T COG0076 243 DAAFGGFLLPFLEPDGR--WD-FG----LEGVDSITVDGHKYG-LAPIGCGVVLFRDEEALRRILIFADYYLPGGGIPNF 314 (460)
T ss_pred EccccceeecccCccch--hh-cC----CCCceEEEECccccc-CCCCCceEEEEECHHHhhhhhhcccccCCCCCcCce
Confidence 999998643 222211 00 10 223344567999965 58889999999887 45554443222221
Q ss_pred ---Cc-----hHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCC-CeEecCCceEEEEeeccc
Q 011801 300 ---VS-----SQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVG-INCLKSNAGLFFWMDLRH 362 (477)
Q Consensus 300 ---vs-----~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~g-i~~~~~~~g~~~~~~l~~ 362 (477)
.+ .+.+++....+.-+. +++..++..+..+++.+.|++.| +++........+.+++++
T Consensus 315 ti~~sr~~~~~~~~~~~l~~lG~eG-----y~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~V~fr~~~ 381 (460)
T COG0076 315 TILGSRPGRQALALYANLRRLGREG-----YRKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAFRLKD 381 (460)
T ss_pred eEeeccchHHHHHHHHHHHHhCHhH-----HHHHHHHHHHHHHHHHHHHHhCCCcEeecCCccceEEEEcCC
Confidence 11 133444444443333 35566667788899999999986 787765555677778754
No 333
>PRK06149 hypothetical protein; Provisional
Probab=99.48 E-value=7.4e-11 Score=133.10 Aligned_cols=352 Identities=13% Similarity=0.153 Sum_probs=189.7
Q ss_pred CCCcccccccccccccc--HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCC
Q 011801 35 QNPGGVIQLGLAENQLC--FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPD 112 (477)
Q Consensus 35 ~~~~~~i~l~~~~n~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ 112 (477)
.+.+.+||+..+...++ .+.+.+.+.+.-.. ......|. +....+|.+.+++.+- -..+
T Consensus 582 ~dG~~ylD~~~~~~~lGh~hp~v~~Ai~~q~~~----------l~~~~~~~-~~~~~elae~L~~~~p--------~~~~ 642 (972)
T PRK06149 582 MAGRSYLDMVNNVTVLGHGHPRLAAAAARQWSL----------LNTNSRFH-YAAVAEFSERLAALAP--------DGLD 642 (972)
T ss_pred CCCCEEEECCCCccccCCCCHHHHHHHHHHHHh----------cccccccc-CHHHHHHHHHHHHhCC--------CCcC
Confidence 34566788875544443 45566655442110 00111121 1122344444444431 1236
Q ss_pred cEEEeCChHHHHHHHHHH---hcCCCCeEEEcCCCccchHHHHhhhCC-----c--------EEEEEeccC--CCCccc-
Q 011801 113 RIVMGGGATGANELIMFC---LANPGDAFLVPSPYYAAFDRDLSWRTG-----V--------QIVPVHCDI--SNNFKI- 173 (477)
Q Consensus 113 ~i~~t~G~t~al~~i~~~---l~~~Gd~vlv~~P~y~~~~~~~~~~~g-----~--------~~~~v~~~~--~~~f~i- 173 (477)
.+++++++++|++.+++. +.+ ...|+...-+|++.........+ . .+.+++... ...|.-
T Consensus 643 ~v~f~~SGsEA~e~AlklAr~~tg-r~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~ 721 (972)
T PRK06149 643 TVFLVNSGSEANDLAIRLAWAASG-RRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGA 721 (972)
T ss_pred EEEEeCCchHHHHHHHHHHHHhcC-CCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCc
Confidence 899999999999999874 333 35688888888764422110000 0 112222211 011221
Q ss_pred C-----HHHHHHHHHHHHHhCCCeeEEEEeCC-CCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHH
Q 011801 174 T-----REALEAAYERAQEASINIKGLIITNP-SNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVA 247 (477)
Q Consensus 174 ~-----~~~l~~~~~~~~~~~~~~k~vii~nP-~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~ 247 (477)
+ .+++++.++.....+.++.+||+.-- ++-.....+++-+++|.++|++||+++|+||+..++.-.+..+....
T Consensus 722 ~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e 801 (972)
T PRK06149 722 DSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFE 801 (972)
T ss_pred ccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhh
Confidence 1 24555555443333446766655422 34333556777899999999999999999999977544443333221
Q ss_pred HhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHH----hcccCCCchHHHHHHHHhcC---ChhhHHH
Q 011801 248 EVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRK----MSSFGLVSSQTQYLLASMLS---DDEFVDN 320 (477)
Q Consensus 248 ~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~----~~~~~~vs~~~q~~~~~~L~---~~~~~~~ 320 (477)
. .+..+| ++ +++|.+| .|+.+|.+++.++ +.+.+.. .+++ ..++.+..++.+.|+ +.++ .+
T Consensus 802 ~----~gv~PD--iv--t~gK~lg-~G~Pl~av~~~~~-i~~~~~~~~~~~sT~-~gnP~~~aaala~L~~i~~e~l-~~ 869 (972)
T PRK06149 802 Q----QGVVPD--II--TMAKGMG-NGHPLGAVITRRE-IAEALEAEGYFFSST-GGSPVSCRIGMAVLDVLREEKL-QE 869 (972)
T ss_pred h----cCCCCC--EE--Eeccccc-CCeeeEEEEEcHH-HHhhhccCCcccCCC-CCCHHHHHHHHHHHHHHHhcCH-HH
Confidence 1 122334 22 8899999 8999999999554 4444432 1223 245666665555553 2222 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchhhc--cCchHHHHHHHHHHHhcCeEEeCCCCCCCCCC
Q 011801 321 FLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKE--KTLEGEIALWRTIVNDVKLNVSPGSSFQCTEP 398 (477)
Q Consensus 321 ~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~--~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~ 398 (477)
...+.-++++++.+.+ ..+.++...-..-|+++-+++...... ...+....++..+++ .||.+.|... ..
T Consensus 870 ~~~~~G~~l~~~L~~l---~~~~~~i~~vrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~-~Gvl~~~~g~----~~ 941 (972)
T PRK06149 870 NARRVGDHLKARLEAL---ADRHPLIGAVHGMGLYLGVELVRDRQTLEPATEETAAICDRLLE-LGVIMQPTGD----HL 941 (972)
T ss_pred HHHHHHHHHHHHHHHH---HHhCCCeEEEeecceEEEEEEecCcccCCCChHHHHHHHHHHHh-CCeEEeecCC----CC
Confidence 2222223333322222 122343222234568888877421111 111112245555554 5999987422 23
Q ss_pred CEEEEEecc-CCHHHHHHHHHHHHHHHhh
Q 011801 399 GWFRVCFAN-MDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 399 ~~~Rl~~~~-~~~e~l~~~l~~l~~~~~~ 426 (477)
+.+|+.... ++++++++++++|.+++.+
T Consensus 942 ~vl~~~Ppl~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 942 NILKIKPPLCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred CEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 578987764 4999999999999999864
No 334
>PRK07036 hypothetical protein; Provisional
Probab=99.47 E-value=6.4e-11 Score=123.27 Aligned_cols=352 Identities=11% Similarity=0.024 Sum_probs=189.2
Q ss_pred CCCCccccccccc--cccc--cHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCcc
Q 011801 34 TQNPGGVIQLGLA--ENQL--CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTF 109 (477)
Q Consensus 34 ~~~~~~~i~l~~~--~n~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~ 109 (477)
+.+.+..||+..+ ...+ ..+.+.+.+++.-+. ......+.. ...+.+..+|+.+.+... -
T Consensus 47 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~----------~~~~~~~~~--~~~~~~~~lae~L~~~~p----~ 110 (466)
T PRK07036 47 DADGRRYLDGIGGMWCVNVGYGREEMADAIADQARR----------LPYYTPFGD--MTNAPAAELAAKLAELAP----G 110 (466)
T ss_pred ECCCCEEEECcccHHhhcCCCCCHHHHHHHHHHHHh----------Ccccccccc--cCCHHHHHHHHHHHHhCC----C
Confidence 4455667887544 2334 346666666553110 000111210 123455666666654321 1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhc------C-CC-CeEEEcCCCccchHHHHhhhCCc------------EEEEEeccC--
Q 011801 110 DPDRIVMGGGATGANELIMFCLA------N-PG-DAFLVPSPYYAAFDRDLSWRTGV------------QIVPVHCDI-- 167 (477)
Q Consensus 110 ~~~~i~~t~G~t~al~~i~~~l~------~-~G-d~vlv~~P~y~~~~~~~~~~~g~------------~~~~v~~~~-- 167 (477)
.-+.+++++++++|++.+++... + +| .+|+...-+|++....+...+|. .+..++...
T Consensus 111 ~~~~v~f~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~ 190 (466)
T PRK07036 111 DLNHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPY 190 (466)
T ss_pred CcCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCccc
Confidence 23589999999999999887631 1 22 57888888888754332111121 122222211
Q ss_pred CCCcccC--------HHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccC-CCHHHHHHHHHHHHhcCeEEEeccccccccc
Q 011801 168 SNNFKIT--------REALEAAYERAQEASINIKGLIITNPSNPLGTT-LDRDTLKSLVSFINDKNIHLVCDEIYAATVF 238 (477)
Q Consensus 168 ~~~f~i~--------~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~-~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~ 238 (477)
...+..+ .+.+++.+.. ....++.+|++.--..-.|.. .+++-+++|.++|++||+++|.||+..++.-
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGR 268 (466)
T PRK07036 191 RRPAGMSEAAFCDFLVDEFEDKILS--LGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGR 268 (466)
T ss_pred ccccCCChHHHHHHHHHHHHHHHHH--cCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCc
Confidence 0011121 1233333332 123467777766445555764 5677799999999999999999999987533
Q ss_pred CCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCC-ceEEEEEeCCHHHHHHHHHh----------cccCCCchHHHHH
Q 011801 239 SSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPG-FRVGIVYSFNDTVVNCGRKM----------SSFGLVSSQTQYL 307 (477)
Q Consensus 239 ~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G-~RvG~i~~~~~~i~~~~~~~----------~~~~~vs~~~q~~ 307 (477)
.+.. ...... .+..+| + -+++|.+| .| +.+|.+++.++ +.+..... .+|+ .++++..+
T Consensus 269 tG~~-~~~~~~---~gv~PD--i--vt~gK~l~-gG~~Pi~av~~~~~-i~~~~~~~~~~~~~~~~~~T~~-gnpl~~aa 337 (466)
T PRK07036 269 LGHF-FASEAV---FGIQPD--I--ITFAKGLT-SGYQPLGAVIISER-LLDVISGPNAKGNVFTHGFTYS-GHPVACAA 337 (466)
T ss_pred Cchh-hhhhhh---cCCCCC--E--EEEccccc-cCccccEEEEEcHH-HHHHHhcccCcCcccccCCCCC-CCHHHHHH
Confidence 2322 121111 122344 2 37799998 88 49999999554 44433211 1222 45666565
Q ss_pred HHHhcC---ChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchhhcc-Cc--h--HHHHHHHHH
Q 011801 308 LASMLS---DDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEK-TL--E--GEIALWRTI 379 (477)
Q Consensus 308 ~~~~L~---~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~~-~~--~--~e~~l~~~l 379 (477)
+.+.|+ +.++ -+...+..+++++..+ .+.+.++...-..-|+++.+.+....... .+ + ....++..+
T Consensus 338 a~a~Le~i~~~~l-~~~~~~~g~~l~~~L~----~l~~~~~v~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (466)
T PRK07036 338 ALKNIEIMEREGL-CEHVREVGPYFEERLA----SLRELPLVGDVRGDHLMACVECVADKGSKALLPEDIAIGQRIDRHC 412 (466)
T ss_pred HHHHHHHHHhCCH-HHHHHHHHHHHHHHHH----HhccCCCEEEEEeeceEEEEEEccCccccCCCCchhHHHHHHHHHH
Confidence 555553 2222 1223333333332221 23333432223345678888885321111 00 1 112355555
Q ss_pred HHhcCeEEeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHhhh
Q 011801 380 VNDVKLNVSPGSSFQCTEPGWFRVCFAN-MDDDTLQVALNRIAAFVQQD 427 (477)
Q Consensus 380 l~~~gI~v~pg~~f~~~~~~~~Rl~~~~-~~~e~l~~~l~~l~~~~~~~ 427 (477)
+ +.||++.|.. +.+|++... ++++++++++++|.+++++.
T Consensus 413 ~-~~Gvl~~~~~-------~~~~l~Ppl~it~~~id~~~~~l~~al~~~ 453 (466)
T PRK07036 413 Q-ERGLLVRPLE-------HLCVLSPPLIITRAQIDEIVAILRAAIEET 453 (466)
T ss_pred H-HCCcEEeecC-------CEEEEeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 5 5699997631 357888765 49999999999999998764
No 335
>PRK06148 hypothetical protein; Provisional
Probab=99.47 E-value=4e-11 Score=135.43 Aligned_cols=353 Identities=11% Similarity=0.064 Sum_probs=191.4
Q ss_pred CCCcccccccccccccc--HHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCC
Q 011801 35 QNPGGVIQLGLAENQLC--FDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPD 112 (477)
Q Consensus 35 ~~~~~~i~l~~~~n~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ 112 (477)
.+.+..||+..+...++ .+.+.+.+++.-+. ......|. .+....+|+.+.+... -.-+
T Consensus 621 ~dG~~ylD~~~g~~~lGH~hp~v~~Ai~~q~~~----------l~~~~~~~-----~~~~~~lAe~L~~~~p----~~~~ 681 (1013)
T PRK06148 621 NRGRAYLDCFNNVCHVGHAHPRVVAAAARQAAR----------LNTNTRYL-----HDAIVAYAERLTATLP----DGLT 681 (1013)
T ss_pred CCCCEEEEcccChhhcCCCCHHHHHHHHHHHhh----------cCCcCCcC-----CHHHHHHHHHHHHhCC----CCcC
Confidence 44566788866554453 46677766653211 00011221 2334445554443211 1236
Q ss_pred cEEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCccchHHHHhhhCC--------------cEEEEEeccCCCCccc-C-
Q 011801 113 RIVMGGGATGANELIMFCLA--NPGDAFLVPSPYYAAFDRDLSWRTG--------------VQIVPVHCDISNNFKI-T- 174 (477)
Q Consensus 113 ~i~~t~G~t~al~~i~~~l~--~~Gd~vlv~~P~y~~~~~~~~~~~g--------------~~~~~v~~~~~~~f~i-~- 174 (477)
.+++++++++|++.+++.-. ....+|+...-+|++....+...++ +..++.|......|.. +
T Consensus 682 ~v~f~nSGsEA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 761 (1013)
T PRK06148 682 VAFFVNSGSEANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDA 761 (1013)
T ss_pred EEEEeCCcHHHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChh
Confidence 79999999999999987642 2235788888888876432111111 1111111000011221 1
Q ss_pred ------HHHHHHHHHHHHHhCCCeeEEEEeCCCCCccc-CCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHH
Q 011801 175 ------REALEAAYERAQEASINIKGLIITNPSNPLGT-TLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVA 247 (477)
Q Consensus 175 ------~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~-~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~ 247 (477)
.+.+++.++.....+.++.+||+.--..-.|. ..+.+-+++|.++|+++|+++|.||+..++.-.+..+....
T Consensus 762 ~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e 841 (1013)
T PRK06148 762 EHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFE 841 (1013)
T ss_pred hhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhh
Confidence 13456555433233446777665532333454 55777899999999999999999999987543343222211
Q ss_pred HhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHH----hcccCCCchHHHHHHHHhcC---ChhhHHH
Q 011801 248 EVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRK----MSSFGLVSSQTQYLLASMLS---DDEFVDN 320 (477)
Q Consensus 248 ~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~----~~~~~~vs~~~q~~~~~~L~---~~~~~~~ 320 (477)
. .+..+| +-+++|.+| .|+.+|.+++.+ .+.+.... ..+|+ .++++..++.+.|+ +.++ .+
T Consensus 842 ~----~gv~PD----ivt~gK~lg-gG~Plgav~~~~-ei~~~~~~g~~~~~Tf~-gnpla~aaa~a~L~~i~~e~l-~~ 909 (1013)
T PRK06148 842 T----QGVVPD----IVTMGKPIG-NGHPMGAVVTTR-EIADSFDNGMEYFNTFG-GNPVSCAIGLAVLDIIEDEDL-QR 909 (1013)
T ss_pred h----cCCCcc----eeeeccccc-CCcceEEEEEcH-HHHhhccCCCccccCCC-CCHHHHHHHHHHHHHHhhccH-HH
Confidence 1 111333 237799999 899999999954 44443321 12333 45565555555543 3332 22
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchhhccCc--hHHHHHHHHHHHhcCeEEeCCCCCCCCCC
Q 011801 321 FLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTL--EGEIALWRTIVNDVKLNVSPGSSFQCTEP 398 (477)
Q Consensus 321 ~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~~~~--~~e~~l~~~ll~~~gI~v~pg~~f~~~~~ 398 (477)
...+.-++++++.+.+. ++.++...-..-|+++-+.+......... +....++..++ ++||++.+.... .
T Consensus 910 ~~~~~G~~l~~~L~~l~---~~~~~i~~VrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~-~~Gvl~~~~g~~----~ 981 (1013)
T PRK06148 910 NALEIGNYLLAGLRELQ---DRFDIIGDVRGMGLFLGIELVTDRKTKAPATAIARYVKNGAR-ERGILIGTEGPH----D 981 (1013)
T ss_pred HHHHHHHHHHHHHHHHH---HhCCCceEEeeeceEEEEEecCCccccCccHHHHHHHHHHHH-hCCeEEeccCCC----C
Confidence 23333333333322222 22333222234568888877532111111 11123555555 469999764221 3
Q ss_pred CEEEEEeccC-CHHHHHHHHHHHHHHHhh
Q 011801 399 GWFRVCFANM-DDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 399 ~~~Rl~~~~~-~~e~l~~~l~~l~~~~~~ 426 (477)
..+|+..... +++++++++++|.+++.+
T Consensus 982 ~vlr~~Ppl~it~~~id~~l~~l~~~l~~ 1010 (1013)
T PRK06148 982 NVLKIRPPLIFSRADADHLLEVLDDVLAA 1010 (1013)
T ss_pred CEEEEeCCccCCHHHHHHHHHHHHHHHHH
Confidence 6799988764 999999999999999865
No 336
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.47 E-value=9.2e-11 Score=122.03 Aligned_cols=303 Identities=12% Similarity=0.074 Sum_probs=170.1
Q ss_pred HHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhc------C-CC-CeEEEcCCCccchHHHHhhhCCcE--
Q 011801 90 EFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLA------N-PG-DAFLVPSPYYAAFDRDLSWRTGVQ-- 159 (477)
Q Consensus 90 ~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~------~-~G-d~vlv~~P~y~~~~~~~~~~~g~~-- 159 (477)
+.+..+|+.+.+... -..+.+++++++++|++.+++... . +| .+|+...-+|++....+...+|..
T Consensus 90 ~~~~~lae~L~~~~p----~~~~~v~f~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~ 165 (466)
T PRK07030 90 EPVIELSERLVKITP----PGLSRCFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALF 165 (466)
T ss_pred HHHHHHHHHHHHhCC----CCcCEEEEeCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccc
Confidence 445555665543221 123689999999999999987641 1 23 578888888887653322211211
Q ss_pred ----------EEEEeccCC--CCccc--------CHHHHHHHHHHHHHhCCCeeEEEEeC-CCCCccc-CCCHHHHHHHH
Q 011801 160 ----------IVPVHCDIS--NNFKI--------TREALEAAYERAQEASINIKGLIITN-PSNPLGT-TLDRDTLKSLV 217 (477)
Q Consensus 160 ----------~~~v~~~~~--~~f~i--------~~~~l~~~~~~~~~~~~~~k~vii~n-P~NPtG~-~~~~~~l~~l~ 217 (477)
+..+|.... ..+.. +++++++.+++ .+.++.+|++.- ...-.|. ..+.+-+++|.
T Consensus 166 ~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~---~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr 242 (466)
T PRK07030 166 TETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAE---HHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLR 242 (466)
T ss_pred cccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEecccccCCCcccCCHHHHHHHH
Confidence 122221110 00111 23445555542 234677776663 2444565 45677899999
Q ss_pred HHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCC-ceEEEEEeCCHHHHHHHHH---
Q 011801 218 SFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPG-FRVGIVYSFNDTVVNCGRK--- 293 (477)
Q Consensus 218 ~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G-~RvG~i~~~~~~i~~~~~~--- 293 (477)
++|+++|+++|.||+..++...+..+.. +.. +..+| ++ +++|.+| .| +.+|.+++.++ +.+....
T Consensus 243 ~lc~~~g~llI~DEV~TGfGRtG~~~a~--~~~---gv~PD--iv--~~gKgl~-gG~~Pi~av~~~~e-i~~~~~~~~~ 311 (466)
T PRK07030 243 EACDRYGVHLIHDEIAVGFGRTGTMFAC--EQA---GIRPD--FL--CLSKALT-GGYLPLAAVLTTDT-VYQAFYDDYP 311 (466)
T ss_pred HHHHHcCCEEEEeehhhCcCccccchHH--Hhc---CCCCC--EE--eeehhcc-CCcccceEEEecHH-HHHHHhcccc
Confidence 9999999999999999875433432211 111 12334 22 5689998 89 49999999555 4333321
Q ss_pred -------hcccCCCchHHHHHHHHhcC---ChhhHHHHHHHHHHHHHHHHHHHHHHHhh---CCCeEecCCceEEEEeec
Q 011801 294 -------MSSFGLVSSQTQYLLASMLS---DDEFVDNFLVETSKRLAKRHHNFTKGLEQ---VGINCLKSNAGLFFWMDL 360 (477)
Q Consensus 294 -------~~~~~~vs~~~q~~~~~~L~---~~~~~~~~~~~~~~~l~~r~~~l~~~L~~---~gi~~~~~~~g~~~~~~l 360 (477)
..+|+ .++++..++.+.|+ +.++ .++.++.-+++.+.|++ ...-..-..-|+++-+.+
T Consensus 312 ~~~~~~h~~T~~-gnpla~aaa~a~L~~i~~~~l--------~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~ 382 (466)
T PRK07030 312 TLRAFLHSHSYT-GNPLACAAALATLDIFEQDNV--------IENNRALARRMAEATAHLADHPHVAEVRQTGMILAIEM 382 (466)
T ss_pred cccccccCCCCC-CCHHHHHHHHHHHHHHHhcCH--------HHHHHHHHHHHHHHHHHHhcCCCEEEeEeceeEEEEEe
Confidence 11222 45666666555554 2222 12222222333333333 322111234567887877
Q ss_pred cchhhcc---CchH--HHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHhhh
Q 011801 361 RHLLKEK---TLEG--EIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFAN-MDDDTLQVALNRIAAFVQQD 427 (477)
Q Consensus 361 ~~~~~~~---~~~~--e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~-~~~e~l~~~l~~l~~~~~~~ 427 (477)
....... .... ...+...++ ++||.+.+.. ..+|+.... +++++++++++++.+++++.
T Consensus 383 ~~~~~~~~~~~~~~~~~~~i~~~~~-~~Gvl~~~~g-------~~i~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 383 VQDKASKTPYPWQERRGLKVYQHAL-ERGALLRPLG-------SVVYFLPPYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred ccCccccccCcchhHHHHHHHHHHH-HCCeEEEecC-------CEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 5311100 0011 123555555 4699997631 368988655 49999999999999999874
No 337
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.47 E-value=1e-10 Score=121.56 Aligned_cols=303 Identities=13% Similarity=0.108 Sum_probs=168.6
Q ss_pred HHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCccchHHHHhhhCCcE--------
Q 011801 90 EFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLA--NPGDAFLVPSPYYAAFDRDLSWRTGVQ-------- 159 (477)
Q Consensus 90 ~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~--~~Gd~vlv~~P~y~~~~~~~~~~~g~~-------- 159 (477)
+.+..+|+.+.+..+ -..+.+++++++++|++.++.... ....+|+...-+|++.....-..+|..
T Consensus 113 ~~~~~lae~L~~~~p----~~~~~v~f~~sGseAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~ 188 (459)
T PRK06082 113 ETAIECAEKLTEIAG----GELNRVLFAPGGTSAIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGP 188 (459)
T ss_pred HHHHHHHHHHHHhCC----CCCCEEEECCCcHHHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCC
Confidence 444455555544322 123689999999999999987642 223678888888887643222111211
Q ss_pred ----EEEEeccCC--CCcc-cC------HHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeE
Q 011801 160 ----IVPVHCDIS--NNFK-IT------REALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIH 226 (477)
Q Consensus 160 ----~~~v~~~~~--~~f~-i~------~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~ 226 (477)
+..++.... ..|. .+ ++.+++.+++ ..++.+|++.--.+..+...+.+-+++|.++|+++|++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~----~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~l 264 (459)
T PRK06082 189 LMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEK----EGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVL 264 (459)
T ss_pred CCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhc----CCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 112221100 0011 01 2345555542 23676666543334334567888899999999999999
Q ss_pred EEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCC-ceEEEEEeCCHHHHHHHHH---hcccCCCch
Q 011801 227 LVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPG-FRVGIVYSFNDTVVNCGRK---MSSFGLVSS 302 (477)
Q Consensus 227 lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G-~RvG~i~~~~~~i~~~~~~---~~~~~~vs~ 302 (477)
+|.||+..++.-.+..+.. +. .+..+| ++ +++|.+| .| +.+|.+++.++ +...... ..+++ .++
T Consensus 265 lI~DEV~tG~GRtG~~fa~--e~---~gv~PD--iv--~~gKgl~-gG~~P~~av~~~~~-i~~~~~~~~~~~T~~-gnp 332 (459)
T PRK06082 265 LIIDEIPNGMGRTGEWFTH--QA---YGIEPD--IL--CIGKGLG-GGLVPIAAMITKDK-YNTAAQISLGHYTHE-KSP 332 (459)
T ss_pred EEEechhhCCCccchhhHh--Hh---hCCCCC--EE--Eeccccc-CCCCcceEEEEcHH-HHhhccCCCCCCCCC-cCH
Confidence 9999999874333322111 11 122344 22 4899998 77 59999999654 4332211 11222 455
Q ss_pred HHHHHHHHhcC---ChhhHHHHHHHHHHHHHHHHHHHHHHHhh----CCCeEecCCceEEEEeeccchhhcc--CchHHH
Q 011801 303 QTQYLLASMLS---DDEFVDNFLVETSKRLAKRHHNFTKGLEQ----VGINCLKSNAGLFFWMDLRHLLKEK--TLEGEI 373 (477)
Q Consensus 303 ~~q~~~~~~L~---~~~~~~~~~~~~~~~l~~r~~~l~~~L~~----~gi~~~~~~~g~~~~~~l~~~~~~~--~~~~e~ 373 (477)
++..++.+.|+ +.++ .++++++-++|.+.|++ +++...-..-|+++.+++....... ..+...
T Consensus 333 l~~aaa~a~L~~l~~~~l--------~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~ 404 (459)
T PRK06082 333 LGCAAALATIEVIEQEGL--------LEKVKADSQFMRERLLEMKAKYPLIGDVRGIGLLWGVELVTDRHTKERAYDEAE 404 (459)
T ss_pred HHHHHHHHHHHHHHhcCH--------HHHHHHHHHHHHHHHHHHHhhCCCeeeeeeccceeEEEEccCccccCccHHHHH
Confidence 55555555543 2222 22333333444444433 3332222345678888775321111 111112
Q ss_pred HHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHhhh
Q 011801 374 ALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFAN-MDDDTLQVALNRIAAFVQQD 427 (477)
Q Consensus 374 ~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~-~~~e~l~~~l~~l~~~~~~~ 427 (477)
.++..++ +.||.+.+. ..+.+|++... +++++++++++++.+++.+.
T Consensus 405 ~~~~~~~-~~Gvl~~~~------~~~~i~~~Ppl~it~~eid~~~~~l~~~l~~~ 452 (459)
T PRK06082 405 AVLYRCL-NNGLSFKVS------QGNVIQLSPPLIITREELTQALAILEEAIAKI 452 (459)
T ss_pred HHHHHHH-hCCCEEEec------CCCEEEEeCCCccCHHHHHHHHHHHHHHHHHH
Confidence 3445555 569998763 13579998765 49999999999999998763
No 338
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.46 E-value=9.1e-11 Score=122.00 Aligned_cols=292 Identities=14% Similarity=0.096 Sum_probs=161.2
Q ss_pred cEEEe-CChHHHHHHHHHHhc-CC-CCeEEEcCCCccchHHHHhhhCCc------------EEEEEeccCC--CCcc---
Q 011801 113 RIVMG-GGATGANELIMFCLA-NP-GDAFLVPSPYYAAFDRDLSWRTGV------------QIVPVHCDIS--NNFK--- 172 (477)
Q Consensus 113 ~i~~t-~G~t~al~~i~~~l~-~~-Gd~vlv~~P~y~~~~~~~~~~~g~------------~~~~v~~~~~--~~f~--- 172 (477)
.++++ +++++|++.+++... .+ ..+|+...-+|++....+...+|. .+..++.+.. ..+.
T Consensus 128 ~v~f~~~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 207 (464)
T PRK06938 128 KIQFCGPTGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGG 207 (464)
T ss_pred eEEEeCCCcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCch
Confidence 56665 788999999987642 23 367888888888765332211111 1222332110 0011
Q ss_pred -----cCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccC-CCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccH
Q 011801 173 -----ITREALEAAYERAQEASINIKGLIITNPSNPLGTT-LDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSV 246 (477)
Q Consensus 173 -----i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~-~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~ 246 (477)
.+.+.+++.+++......++.+||+.--..-.|.+ .+.+-+++|.++|+++|+++|.||+..++.-.+..+.
T Consensus 208 ~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a-- 285 (464)
T PRK06938 208 EAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFA-- 285 (464)
T ss_pred hhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHHH--
Confidence 12456666664321111257776664223334654 4688899999999999999999999987533332211
Q ss_pred HHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHH--h-cccCCCchHHHHHHHHhcC---ChhhHHH
Q 011801 247 AEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRK--M-SSFGLVSSQTQYLLASMLS---DDEFVDN 320 (477)
Q Consensus 247 ~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~--~-~~~~~vs~~~q~~~~~~L~---~~~~~~~ 320 (477)
.+..+..+| ++ +++|.+| .|+.+|.+++.++ + ..... . ..|+ .++++..++.+.|+ +.++ .+
T Consensus 286 ---~e~~gv~PD--iv--~~gKglg-gG~PlsAv~~~~~-~-~~~~~~~~~~T~~-gnpla~Aaa~a~L~~l~~~~l-~~ 353 (464)
T PRK06938 286 ---FEHAGIIPD--VV--VLSKAIG-GSLPLAVVVYREW-L-DTWQPGAHAGTFR-GNQMAMAAGSATLRYIKEHRL-AE 353 (464)
T ss_pred ---HHhcCCCCC--EE--Eeecccc-CCCceEEEeehhH-h-hccCCCCCCCCCC-cCHHHHHHHHHHHHHHHHhHH-HH
Confidence 111122344 22 6689998 8999999998654 3 32211 1 2222 45666665555554 2222 12
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchhhcc--------CchHHHHHHHHHHHhcCeEEeCCCC
Q 011801 321 FLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEK--------TLEGEIALWRTIVNDVKLNVSPGSS 392 (477)
Q Consensus 321 ~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~~--------~~~~e~~l~~~ll~~~gI~v~pg~~ 392 (477)
+.++.-++++++.+.+ .+++++...-..-|+++.+++....... .......++..++ ++||++.++..
T Consensus 354 ~~~~~G~~l~~~L~~l---~~~~~~i~~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gll~~~~g~ 429 (464)
T PRK06938 354 HAAAMGERLREHLRQL---QRDYPQLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECL-RRGLILELGGR 429 (464)
T ss_pred HHHHHHHHHHHHHHHH---HHhCCCeeeeeccceEEEEEeccCcccccccccCCccHHHHHHHHHHHH-HCCeEEeecCC
Confidence 2222222333222211 1223432223345688888875321100 0011123455555 56999987532
Q ss_pred CCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHhh
Q 011801 393 FQCTEPGWFRVCFAN-MDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 393 f~~~~~~~~Rl~~~~-~~~e~l~~~l~~l~~~~~~ 426 (477)
+ .+.+|+.... +++++++++++++.+++.+
T Consensus 430 ~----~~~l~~~Ppl~it~~eid~~~~~l~~~l~~ 460 (464)
T PRK06938 430 H----GSVVRFLPPLIITAEQIDEVAEIFAEAVAA 460 (464)
T ss_pred C----CCEEEEECCCccCHHHHHHHHHHHHHHHHH
Confidence 2 3579998665 4999999999999999865
No 339
>PRK07483 hypothetical protein; Provisional
Probab=99.46 E-value=8.7e-11 Score=121.60 Aligned_cols=355 Identities=13% Similarity=0.089 Sum_probs=187.0
Q ss_pred CCCCccccccccc--cccc--cHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCcc
Q 011801 34 TQNPGGVIQLGLA--ENQL--CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTF 109 (477)
Q Consensus 34 ~~~~~~~i~l~~~--~n~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~ 109 (477)
+.+.+.+||+..+ .+.+ +.+.+.+.+++.-+ .+..+....-..+....+|+.+.+... -
T Consensus 26 D~dG~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~-------------~~~~~~~~~~~~~~~~~lae~L~~~~p----~ 88 (443)
T PRK07483 26 DATGKRYLDASGGAAVSCLGHSHPRVIAAIHAQID-------------RLAYAHTSFFTTEPAEALADRLVAAAP----A 88 (443)
T ss_pred eCCCCEEEEcCccHhhhccCCCCHHHHHHHHHHHH-------------hccCccccccCCHHHHHHHHHHHHhCC----C
Confidence 3445667888543 4444 34666666665311 111000000012444556666554321 1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcC-------CC-CeEEEcCCCccchHHHHhhhCCcE------------EEEEeccCCC
Q 011801 110 DPDRIVMGGGATGANELIMFCLAN-------PG-DAFLVPSPYYAAFDRDLSWRTGVQ------------IVPVHCDISN 169 (477)
Q Consensus 110 ~~~~i~~t~G~t~al~~i~~~l~~-------~G-d~vlv~~P~y~~~~~~~~~~~g~~------------~~~v~~~~~~ 169 (477)
..+++++++++++|++.+++.... +| .+|+...-+|++.....-..+|.. +..++.. .
T Consensus 89 ~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~--~ 166 (443)
T PRK07483 89 GLEHVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPC--Y 166 (443)
T ss_pred CCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCC--c
Confidence 236899999999999998875321 33 468888888887643222111111 1112211 0
Q ss_pred Cccc-----C--------HHHHHHHHHHHHHhCCCeeEEEEeCCCC-Cccc-CCCHHHHHHHHHHHHhcCeEEEeccccc
Q 011801 170 NFKI-----T--------REALEAAYERAQEASINIKGLIITNPSN-PLGT-TLDRDTLKSLVSFINDKNIHLVCDEIYA 234 (477)
Q Consensus 170 ~f~i-----~--------~~~l~~~~~~~~~~~~~~k~vii~nP~N-PtG~-~~~~~~l~~l~~~~~~~~~~lI~De~y~ 234 (477)
.|+. + ++++++++.. ....++.+|++.--.. -.|. ..+.+-+++|.++|++||+++|.||+..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~t 244 (443)
T PRK07483 167 AYREQRAGESDEAYGQRLADELEAKILE--LGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMC 244 (443)
T ss_pred cccccccCCCHHHHHHHHHHHHHHHHHh--cCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEeccee
Confidence 1111 1 2344444432 1123677766653222 2354 5577789999999999999999999998
Q ss_pred ccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCc-eEEEEEeCCHHHHHHHHHh-------cccCCCchHHHH
Q 011801 235 ATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGF-RVGIVYSFNDTVVNCGRKM-------SSFGLVSSQTQY 306 (477)
Q Consensus 235 ~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~-RvG~i~~~~~~i~~~~~~~-------~~~~~vs~~~q~ 306 (477)
++.-.+..+ . .+. .+..+| ++ +++|.+| .|+ .+|.+++.++ +.+.+... .+|+ .++++..
T Consensus 245 GfGRtG~~~-a-~~~---~gv~PD--iv--~~gK~l~-gG~~Pi~av~~~~~-i~~~~~~~~~~~~h~~T~~-gnpl~~a 312 (443)
T PRK07483 245 GMGRTGTLF-A-CEE---DGVAPD--LV--TIAKGLG-AGYQPIGAVLASDR-IYDAIADGSGFFQHGHTYL-GHATACA 312 (443)
T ss_pred CcccCcHHH-H-Hhh---cCCCCC--ee--eehhhhc-cCccccEEEEEcHH-HHHHHhcCCCccccCCCCC-CCHHHHH
Confidence 753333221 1 111 122334 22 6799998 896 9999999655 44433211 1222 4556555
Q ss_pred HHHHhcC---ChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchhhcc-Cc--h--HHHHHHHH
Q 011801 307 LLASMLS---DDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEK-TL--E--GEIALWRT 378 (477)
Q Consensus 307 ~~~~~L~---~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~~-~~--~--~e~~l~~~ 378 (477)
++.+.|+ +.++ -+..++.-++++++ |.+.+++.+....-..-|+++-+++....... .+ . ....+++.
T Consensus 313 aa~a~l~~i~~~~l-~~~~~~~g~~l~~~---L~~l~~~~~~i~~vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~ 388 (443)
T PRK07483 313 AALAVQRVIAEDGL-LANVRARGEQLRAR---LRERLGQHPHVGDIRGRGLFVGVELVADRATKAPFDPALKLHARIKRE 388 (443)
T ss_pred HHHHHHHHHHhcCH-HHHHHHHHHHHHHH---HHHHHhcCCCeeeEeecccEEEEEEeecccccCCCCchhhHHHHHHHH
Confidence 5555553 3332 12223333333322 22222223321112245677777774311100 00 1 11235555
Q ss_pred HHHhcCeEEeCCCCC-CCCCCCEEEEEeccC-CHHHHHHHHHHHHHHHhh
Q 011801 379 IVNDVKLNVSPGSSF-QCTEPGWFRVCFANM-DDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 379 ll~~~gI~v~pg~~f-~~~~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~~ 426 (477)
+++ .||++.+.... .....+.+|+..... +++++++++++|.+.+.+
T Consensus 389 ~~~-~Gll~~~~~~~~~~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~ 437 (443)
T PRK07483 389 AMA-RGLMVYPMGGTIDGVRGDHVLLAPPFIITAAQIDEIVERLGDAIDA 437 (443)
T ss_pred HHH-CCcEEEecCccccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 554 59999874211 011135799988764 999999999999999975
No 340
>PRK07480 putative aminotransferase; Validated
Probab=99.46 E-value=2.4e-11 Score=126.15 Aligned_cols=350 Identities=11% Similarity=0.085 Sum_probs=185.2
Q ss_pred CCCCcccccccccc--ccc--cHHHHHHHHHhCCCCcccccccccccccccccCCC-CCcHHHHHHHHHHHhcccCCCCc
Q 011801 34 TQNPGGVIQLGLAE--NQL--CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDY-HGLPEFRQAVAKFMGKGRGGRVT 108 (477)
Q Consensus 34 ~~~~~~~i~l~~~~--n~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~-~G~~~lr~aia~~~~~~~g~~~~ 108 (477)
+.+.+..||+..+. ..+ +.+.+.+.+++.-+ .+..+... ....+.+..+|+.+.+..+
T Consensus 46 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~-------------~~~~~~~~~~~~~~~~~~lae~L~~~~p---- 108 (456)
T PRK07480 46 DSEGNKILDGMAGLWCVNVGYGRKELADAAARQMR-------------ELPYYNTFFKTTHPPAIELAAKLAEVAP---- 108 (456)
T ss_pred eCCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHH-------------hcCCcccccccCCHHHHHHHHHHHHhCC----
Confidence 44556678885442 333 34666666655311 11111100 1123445555555544321
Q ss_pred cCCCcEEEeCChHHHHHHHHHHhcC-------CC-CeEEEcCCCccchHHHHhhhCCcE------------EEEEeccC-
Q 011801 109 FDPDRIVMGGGATGANELIMFCLAN-------PG-DAFLVPSPYYAAFDRDLSWRTGVQ------------IVPVHCDI- 167 (477)
Q Consensus 109 ~~~~~i~~t~G~t~al~~i~~~l~~-------~G-d~vlv~~P~y~~~~~~~~~~~g~~------------~~~v~~~~- 167 (477)
-.-+++++++++++|++.+++.... +| .+|+...-+|++........+|.. +..++.+.
T Consensus 109 ~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~ 188 (456)
T PRK07480 109 PGFNHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYW 188 (456)
T ss_pred CCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcc
Confidence 1236899999999999999876421 33 468888888877542211111211 11111100
Q ss_pred -CCCcccC--------HHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccC-CCHHHHHHHHHHHHhcCeEEEecccccccc
Q 011801 168 -SNNFKIT--------REALEAAYERAQEASINIKGLIITNPSNPLGTT-LDRDTLKSLVSFINDKNIHLVCDEIYAATV 237 (477)
Q Consensus 168 -~~~f~i~--------~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~-~~~~~l~~l~~~~~~~~~~lI~De~y~~~~ 237 (477)
...+..+ .+++++.+.+ ....++.+|++.--..-.|.. .+.+-+++|.++|++||+++|.||++.++.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfG 266 (456)
T PRK07480 189 FGEGGDMTPEEFGLAAARQLEAKILE--LGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFG 266 (456)
T ss_pred cccccCCChHHHHHHHHHHHHHHHHh--cCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCC
Confidence 0000111 2344443322 112367777665444456765 466679999999999999999999998753
Q ss_pred cCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCc-eEEEEEeCCHHHHHHHH-H---h---cccCCCchHHHHHHH
Q 011801 238 FSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGF-RVGIVYSFNDTVVNCGR-K---M---SSFGLVSSQTQYLLA 309 (477)
Q Consensus 238 ~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~-RvG~i~~~~~~i~~~~~-~---~---~~~~~vs~~~q~~~~ 309 (477)
-.+..+. . +. .+..+| +-+|+|.+| .|+ .+|.+++.++ +.+.+. . . .+|+ .++++..++.
T Consensus 267 RtG~~~a-~-~~---~gv~PD----iv~~gK~l~-gG~~Pi~av~~~~~-i~~~~~~~~~~~~~~~T~~-gnpl~~Aaa~ 334 (456)
T PRK07480 267 RTGEWFG-S-QH---FGIKPD----LMTIAKGLT-SGYIPMGAVGVGDR-VAEVLIEEGGEFNHGFTYS-GHPVAAAVAL 334 (456)
T ss_pred cCcchhh-h-hh---cCCCCC----eeeeehhhc-cCCccceEEEEcHH-HHHHHhcCCCCcccCCCCC-cCHHHHHHHH
Confidence 3333221 1 11 122344 237799998 784 8999999554 444431 1 1 1222 4566666655
Q ss_pred HhcC---ChhhHHHHH-HHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchhhc-cCchH----HHHHHHHHH
Q 011801 310 SMLS---DDEFVDNFL-VETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKE-KTLEG----EIALWRTIV 380 (477)
Q Consensus 310 ~~L~---~~~~~~~~~-~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~-~~~~~----e~~l~~~ll 380 (477)
+.|+ +.++ -+.. ++.-+++.++ +.+ +.++++...-..-|+++-+.+...... ..+.. ...+...++
T Consensus 335 a~L~~l~~~~l-~~~~~~~~g~~l~~~---l~~-l~~~~~i~~vrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (456)
T PRK07480 335 ANLRILRDEGI-VERVRDDTGPYLQKR---LRE-LADHPLVGEVRGVGLVGAIELVKDKATRERFEAGGGVGTICRDHCF 409 (456)
T ss_pred HHHHHHHhCCH-HHHHHHHHHHHHHHH---HHH-hhcCCCeeeEEeecceEEEEEeccccccccCcchhhHHHHHHHHHH
Confidence 5553 2222 1112 1222333322 222 333443212234467777777421110 11111 113344444
Q ss_pred HhcCeEEeCCCCCCCCCCCEEEEEeccC-CHHHHHHHHHHHHHHHhhh
Q 011801 381 NDVKLNVSPGSSFQCTEPGWFRVCFANM-DDDTLQVALNRIAAFVQQD 427 (477)
Q Consensus 381 ~~~gI~v~pg~~f~~~~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~~~ 427 (477)
++||.+.+. .+.+|++.+.. +++++++++++|.+++.+.
T Consensus 410 -~~Gll~~~~-------~~~l~~~Ppl~it~~eid~~~~~l~~al~~~ 449 (456)
T PRK07480 410 -ANGLIMRAV-------GDRMIISPPLVITHAEIDELVEKARKALDAT 449 (456)
T ss_pred -HCCcEEeec-------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 569999752 14689998764 9999999999999999764
No 341
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.46 E-value=1.2e-10 Score=121.22 Aligned_cols=285 Identities=13% Similarity=0.143 Sum_probs=162.8
Q ss_pred CcEEEeCChHHHHHHHHHHhc-------CCC-CeEEEcCCCccchHHHHhhhCCc------------EEEEEeccC--CC
Q 011801 112 DRIVMGGGATGANELIMFCLA-------NPG-DAFLVPSPYYAAFDRDLSWRTGV------------QIVPVHCDI--SN 169 (477)
Q Consensus 112 ~~i~~t~G~t~al~~i~~~l~-------~~G-d~vlv~~P~y~~~~~~~~~~~g~------------~~~~v~~~~--~~ 169 (477)
+.+++++++++|++.+++... .+| .+|+...-+|++....+-..+|. .+..+|... ..
T Consensus 117 ~~v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~ 196 (460)
T PRK06916 117 KKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRS 196 (460)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCccccc
Confidence 689999999999999987642 233 67888888888754322211121 112222110 00
Q ss_pred Ccc--------cCHHHHHHHHHHHHHhCCCeeEEEEeC-CCCCcccC-CCHHHHHHHHHHHHhcCeEEEecccccccccC
Q 011801 170 NFK--------ITREALEAAYERAQEASINIKGLIITN-PSNPLGTT-LDRDTLKSLVSFINDKNIHLVCDEIYAATVFS 239 (477)
Q Consensus 170 ~f~--------i~~~~l~~~~~~~~~~~~~~k~vii~n-P~NPtG~~-~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~ 239 (477)
.+. -+++++++.++. .+.++.+|++.- ...-.|.+ .+.+-+++|.++|+++|+++|.||+..++.-.
T Consensus 197 ~~~~~~~~~~~~~~~~l~~~l~~---~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRt 273 (460)
T PRK06916 197 PYGNDKAEIVKKHLEELEELLKE---KHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRT 273 (460)
T ss_pred ccCCChHHHHHHHHHHHHHHHHh---CCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcC
Confidence 011 123455555542 234777777764 24555765 58888999999999999999999999774333
Q ss_pred CCCcccHHHhhhhccCCCCcEEEEecCCcccCCCC-ceEEEEEeCCHHHHHHHHH--------h--cccCCCchHHHHHH
Q 011801 240 SPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPG-FRVGIVYSFNDTVVNCGRK--------M--SSFGLVSSQTQYLL 308 (477)
Q Consensus 240 ~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G-~RvG~i~~~~~~i~~~~~~--------~--~~~~~vs~~~q~~~ 308 (477)
+..+. . +..+..+| + -+++|.+| .| +.+|.+++.++ +.+.... . .+|+ .++++..++
T Consensus 274 G~~~a-~----~~~gv~PD--i--v~~gK~l~-gG~~Pi~av~~~~e-i~~~~~~~~~~~~~~~~~~T~~-gnpl~~aaa 341 (460)
T PRK06916 274 GKMFA-C----EHENVTPD--I--MTAGKGLT-GGYLPIAITVTTDE-IYNAFYGDYEEQKTFFHGHSYT-GNPLGCAVA 341 (460)
T ss_pred chhhH-H----HhcCCCCC--e--eeeehhhh-cCccccceeeecHH-HHHHhhccccccCccccCCCCC-CCHHHHHHH
Confidence 32211 1 11122344 2 26799998 88 59999999655 4333221 1 1222 355555555
Q ss_pred HHhcC---ChhhHHHHHHHHHHHHHHHHHHHHHHHhhC---CCeEecCCceEEEEeeccchhhcc-Cc--hH--HHHHHH
Q 011801 309 ASMLS---DDEFVDNFLVETSKRLAKRHHNFTKGLEQV---GINCLKSNAGLFFWMDLRHLLKEK-TL--EG--EIALWR 377 (477)
Q Consensus 309 ~~~L~---~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~---gi~~~~~~~g~~~~~~l~~~~~~~-~~--~~--e~~l~~ 377 (477)
.+.|+ +.++ .+++++.-+++.+.|+++ .+......-|+++-+.+....... .+ .. ...++.
T Consensus 342 ~a~l~~l~~~~l--------~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~ 413 (460)
T PRK06916 342 LANLELYEKTNL--------IEQVARKTEYVATQLEDLFALKHVGDIRQLGLMVGIELVKNKETKEPFEWTERVGVQVCK 413 (460)
T ss_pred HHHHHHHHhccH--------HHHHHHHHHHHHHHHHHhhcCCCeEEeecCCceeeEEeecccccccCCCchhhHHHHHHH
Confidence 55553 2222 223333334444444432 221112234577777764311110 01 11 123555
Q ss_pred HHHHhcCeEEeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHhhh
Q 011801 378 TIVNDVKLNVSPGSSFQCTEPGWFRVCFAN-MDDDTLQVALNRIAAFVQQD 427 (477)
Q Consensus 378 ~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~-~~~e~l~~~l~~l~~~~~~~ 427 (477)
.++ +.||++.|.. ..+|+..+. ++++++++++++|.+++++.
T Consensus 414 ~~~-~~Gvl~~~~g-------~~l~~~Ppl~it~~~id~~~~~l~~~l~~~ 456 (460)
T PRK06916 414 RSR-ELGMLTRPLG-------NTIVFMPPLASTIDELDEMLRILYKAISDV 456 (460)
T ss_pred HHH-HCCeEEEecC-------CEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 555 5699998641 368888654 49999999999999999763
No 342
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.45 E-value=8.7e-11 Score=120.82 Aligned_cols=337 Identities=12% Similarity=0.081 Sum_probs=182.1
Q ss_pred CCCCccccccccc--cccc--cHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCcc
Q 011801 34 TQNPGGVIQLGLA--ENQL--CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTF 109 (477)
Q Consensus 34 ~~~~~~~i~l~~~--~n~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~ 109 (477)
+.+.+..||+..+ ...+ +.+.+.+.+++.-+. .. ...+... ..+....+|+.+.+..+ -
T Consensus 36 D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~----------~~-~~~~~~~--~~~~~~~lae~L~~~~p----~ 98 (422)
T PRK05630 36 LEDGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDT----------MS-HVMFGGL--THEPAIKLTRKLLNLTD----N 98 (422)
T ss_pred ECCCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHh----------CC-CcccCCc--CCHHHHHHHHHHHhhCC----C
Confidence 4556778888544 3333 346666666553110 00 0011101 12334455555543321 1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcC-------CC-CeEEEcCCCccchHHHHhhhCCc-------------EEEEEeccCC
Q 011801 110 DPDRIVMGGGATGANELIMFCLAN-------PG-DAFLVPSPYYAAFDRDLSWRTGV-------------QIVPVHCDIS 168 (477)
Q Consensus 110 ~~~~i~~t~G~t~al~~i~~~l~~-------~G-d~vlv~~P~y~~~~~~~~~~~g~-------------~~~~v~~~~~ 168 (477)
.-+++++++++++|++.+++.-.. +| .+|+...-+|++....+...++- ....+|....
T Consensus 99 ~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~ 178 (422)
T PRK05630 99 GLDHVFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPV 178 (422)
T ss_pred CcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcc
Confidence 236899999999999998876321 23 57898888888754322211121 1122222110
Q ss_pred CCcccCHHHH---HHHHHHHHHhCCCeeEEEEeC-CCCCcccC-CCHHHHHHHHHHHHhcCeEEEecccccccccCCCCc
Q 011801 169 NNFKITREAL---EAAYERAQEASINIKGLIITN-PSNPLGTT-LDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKF 243 (477)
Q Consensus 169 ~~f~i~~~~l---~~~~~~~~~~~~~~k~vii~n-P~NPtG~~-~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~ 243 (477)
...+.+++ .+.+++... .++.+|++.- ...-.|.. .+.+-+++|.++|+++|+++|+||++.++...+..+
T Consensus 179 --~~~~~~~~~~~~~~~~~~~~--~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~ 254 (422)
T PRK05630 179 --RGSSPQEISEYLRSLELLID--ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELF 254 (422)
T ss_pred --cCCChHHHHHHHHHHHHHHh--hceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhh
Confidence 11122222 222222111 2677776663 14556764 567789999999999999999999997643223221
Q ss_pred ccHHHhhhhccCCCCcEEEEecCCcccCCCC-ceEEEEEeCCHHHHHHHHH---------hcccCCCchHHHHHHHHhcC
Q 011801 244 TSVAEVIQEMDCNRDLIHIIYSLSKDMGLPG-FRVGIVYSFNDTVVNCGRK---------MSSFGLVSSQTQYLLASMLS 313 (477)
Q Consensus 244 ~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G-~RvG~i~~~~~~i~~~~~~---------~~~~~~vs~~~q~~~~~~L~ 313 (477)
. .+. .+..+| ++ +|+|.+| .| ..+|.++++++ +.+.+.. ..+|+ .++.+..++.+.|+
T Consensus 255 -a-~~~---~gv~PD--i~--t~gK~l~-gG~~p~~av~~~~~-i~~~~~~~~~~~~~~h~~T~~-g~Pla~aaa~aaL~ 322 (422)
T PRK05630 255 -A-TLA---AGVTPD--IM--CVGKALT-GGFMSFAATLCTDK-VAQLISTPNGGGALMHGPTFM-ANPLACAVAHASLE 322 (422)
T ss_pred -H-HHh---cCCCCC--ee--eeechhh-cCccccceeeccHH-HHHHHhccCCCCccccCCCCc-CCHHHHHHHHHHHH
Confidence 1 111 111334 22 8899997 67 48999998554 4443321 12232 44555554444443
Q ss_pred ---ChhhHHHHHHHHHHHHHHHHHHHHHHHhhC----CCeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeE
Q 011801 314 ---DDEFVDNFLVETSKRLAKRHHNFTKGLEQV----GINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLN 386 (477)
Q Consensus 314 ---~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~----gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~ 386 (477)
+.++ .+++++.-++|.+.|+++ .+.-. ..-|+++-+.+..... ...++..++ ++||.
T Consensus 323 ~l~~~~~--------~~~~~~~g~~l~~~L~~l~~~~~v~~v-Rg~Gl~~~ie~~~~~~------~~~~~~~~~-~~Gl~ 386 (422)
T PRK05630 323 IIETGMW--------RKQVKRIEAELIAGLSPLAHLPGVADV-RVLGAIGVVEMEQPVD------MEEATQAAV-DHGVW 386 (422)
T ss_pred HHHhCcH--------HHHHHHHHHHHHHHHHHhhcCCCeeee-eccccEEEEEECCccc------HHHHHHHHH-HCCeE
Confidence 3222 223333333344444322 11111 2246788888753211 113455555 56999
Q ss_pred EeCCCCCCCCCCCEEEEEeccC-CHHHHHHHHHHHHHHHhh
Q 011801 387 VSPGSSFQCTEPGWFRVCFANM-DDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 387 v~pg~~f~~~~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~~ 426 (477)
+.+. + +.+|+..+.. +++++++++++|+++++.
T Consensus 387 ~~~~------g-~~l~~~PpL~it~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 387 LRPF------G-RLVYVMPPYITTSEQIAQICAALAAAVKA 420 (422)
T ss_pred EEec------C-CEEEEECCccCCHHHHHHHHHHHHHHHhc
Confidence 9763 1 4789988764 999999999999999865
No 343
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.44 E-value=1.1e-10 Score=120.21 Aligned_cols=281 Identities=12% Similarity=0.081 Sum_probs=163.4
Q ss_pred CCcEEEeCChHHHHHHHHHHhc-------CCC-CeEEEcCCCccchHHHHhhhCCc-------------EEEEEeccCCC
Q 011801 111 PDRIVMGGGATGANELIMFCLA-------NPG-DAFLVPSPYYAAFDRDLSWRTGV-------------QIVPVHCDISN 169 (477)
Q Consensus 111 ~~~i~~t~G~t~al~~i~~~l~-------~~G-d~vlv~~P~y~~~~~~~~~~~g~-------------~~~~v~~~~~~ 169 (477)
.+++++++++++|++.+++... .+| .+|+...-+|++........+|- .+..+|... .
T Consensus 104 ~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~-~ 182 (429)
T PRK06173 104 LNKIFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPS-I 182 (429)
T ss_pred cCEEEEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCC-c
Confidence 3689999999999999887642 133 57888888888743221111110 011122110 0
Q ss_pred Ccc-----cCHHHHHHHHHHHHHhCCCeeEEEEeCC-CCCcccC-CCHHHHHHHHHHHHhcCeEEEecccccccccCCCC
Q 011801 170 NFK-----ITREALEAAYERAQEASINIKGLIITNP-SNPLGTT-LDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPK 242 (477)
Q Consensus 170 ~f~-----i~~~~l~~~~~~~~~~~~~~k~vii~nP-~NPtG~~-~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~ 242 (477)
.+. -++++|++.++. .+.++.+|++.-- ..-.|.. .+.+-+++|.++|++||+++|+||++.++.-.+..
T Consensus 183 ~~~~~~~~~~l~~l~~~i~~---~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~ 259 (429)
T PRK06173 183 KFGEEWNDEAIEPLQDLLEQ---KGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKL 259 (429)
T ss_pred ccchhHHHHHHHHHHHHHHh---CCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcc
Confidence 011 134556666642 2346777776632 4555765 67788999999999999999999999764222322
Q ss_pred cccHHHhhhhccCCCCcEEEEecCCcccCCCCc-eEEEEEeCCHHHHHHHHH-------h-cccCCCchHHHHHHHHhcC
Q 011801 243 FTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGF-RVGIVYSFNDTVVNCGRK-------M-SSFGLVSSQTQYLLASMLS 313 (477)
Q Consensus 243 ~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~-RvG~i~~~~~~i~~~~~~-------~-~~~~~vs~~~q~~~~~~L~ 313 (477)
+ . .+. .+..+| ++ +|+|.+| .|+ .++.++..++ +.+.+.. . .+++ .++++..++.+.|+
T Consensus 260 ~-a-~~~---~gv~PD--iv--~~gK~l~-gG~~p~~a~~~~~~-i~~~~~~~~~~~~~~~~T~~-g~p~~~aaa~a~l~ 327 (429)
T PRK06173 260 F-A-LEH---AGVVPD--IM--CIGKALT-GGYLTLSATITTEA-IAQTICSGEAKCFMHGPTFM-ANPLACAIAAESIR 327 (429)
T ss_pred h-H-HHh---cCCCCC--EE--Eeehhhh-CCccccceEEecHH-HHHHHhcCCCCccccCCCCC-cCHHHHHHHHHHHH
Confidence 1 1 111 112334 33 4899997 884 7888888554 4443321 1 1222 34555555544443
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEec--CCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCC
Q 011801 314 DDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLK--SNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPG 390 (477)
Q Consensus 314 ~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~--~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg 390 (477)
-- ++ ....++++++-++|.+.|++. +..... ...|+++-+.+..... ...+++.++ +.||.+.+.
T Consensus 328 ~i---~~--~~~~~~~~~~g~~l~~~L~~~~~~~~v~~vRg~Gl~~~iel~~~~~------~~~i~~~l~-e~Gi~v~~~ 395 (429)
T PRK06173 328 LL---LE--SPWQQNIQRIEAQLKQELAPAAEFDSVAEVRVLGAIGVVEMKEPVN------MATLQPRFV-EHGIWVRPF 395 (429)
T ss_pred HH---Hh--CCHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEeCCccc------HHHHHHHHH-HCCeEEEec
Confidence 21 11 012334445555566666543 322221 1346777777753211 123555554 569999764
Q ss_pred CCCCCCCCCEEEEEeccC-CHHHHHHHHHHHHHHHhh
Q 011801 391 SSFQCTEPGWFRVCFANM-DDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 391 ~~f~~~~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~~ 426 (477)
. ..+|+..... +++++++++++|.+++.+
T Consensus 396 g-------~~l~~~Ppl~it~~ei~~~~~~l~~~l~~ 425 (429)
T PRK06173 396 G-------KLVYIMPPFIISPDELSQLTSGLLRVLKQ 425 (429)
T ss_pred C-------CEEEEeCCccCCHHHHHHHHHHHHHHHHH
Confidence 1 3799998764 999999999999999865
No 344
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.44 E-value=7.7e-11 Score=121.55 Aligned_cols=280 Identities=15% Similarity=0.112 Sum_probs=162.5
Q ss_pred CcEEEeCChHHHHHHHHHHhc-------CCC-CeEEEcCCCccchHHHHhhhCCcE-------------EEEEeccCCCC
Q 011801 112 DRIVMGGGATGANELIMFCLA-------NPG-DAFLVPSPYYAAFDRDLSWRTGVQ-------------IVPVHCDISNN 170 (477)
Q Consensus 112 ~~i~~t~G~t~al~~i~~~l~-------~~G-d~vlv~~P~y~~~~~~~~~~~g~~-------------~~~v~~~~~~~ 170 (477)
+++++++++++|++.++.... .+| .+|+...-+|.+....+...+|.. ...++.. ...
T Consensus 106 ~~v~f~~sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p-~~~ 184 (427)
T TIGR00508 106 DCVFLADSGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAP-QNR 184 (427)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCC-Ccc
Confidence 689999999999998887532 123 578888888887643322211211 1111111 011
Q ss_pred cc-----cCHHHHHHHHHHHHHhCCCeeEEEEeCC-CCCccc-CCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCc
Q 011801 171 FK-----ITREALEAAYERAQEASINIKGLIITNP-SNPLGT-TLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKF 243 (477)
Q Consensus 171 f~-----i~~~~l~~~~~~~~~~~~~~k~vii~nP-~NPtG~-~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~ 243 (477)
|. -+.+++++.+++. +.++.+|++.-- .+-.|. ..+.+.+++|.++|+++|+++|+||++.++...+..+
T Consensus 185 ~~~~~~~~~~~~l~~~l~~~---~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~ 261 (427)
T TIGR00508 185 FDEEWNEEAITPLAKLMELH---SDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLF 261 (427)
T ss_pred ccchhHHHHHHHHHHHHHhc---CCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccc
Confidence 11 1345666666432 335666555531 455565 4578899999999999999999999997654444332
Q ss_pred ccHHHhhhhccCCCCcEEEEecCCcccCCCCc-eEEEEEeCCHHHHHHHHHh--------cccCCCchHHHHHHHHhcCC
Q 011801 244 TSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGF-RVGIVYSFNDTVVNCGRKM--------SSFGLVSSQTQYLLASMLSD 314 (477)
Q Consensus 244 ~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~-RvG~i~~~~~~i~~~~~~~--------~~~~~vs~~~q~~~~~~L~~ 314 (477)
.. +.. +..+| ++ +++|.++ .|+ .++.++..++ +.+.+... .+++ .++++..++.+.|+-
T Consensus 262 ~~--~~~---~v~pD--i~--~~gK~l~-gG~~p~~a~~~~~~-~~~~~~~~~~~~~~~~~T~~-g~p~~~aaa~a~l~~ 329 (427)
T TIGR00508 262 AC--EHA---GVVPD--IL--CVGKALT-GGYMTLSATVTTDK-VAQTISSGEAGCFMHGPTFM-GNPLACAVAEASLAI 329 (427)
T ss_pred hh--hhc---CCCCC--EE--Eechhhh-cCcccceEEEEcHH-HHHHHhcCCCCccccCCCCC-cCHHHHHHHHHHHHH
Confidence 22 111 11333 33 4799997 885 6888887444 44444321 1222 355555555555541
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCe-Eec--CCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCC
Q 011801 315 DEFVDNFLVETSKRLAKRHHNFTKGLEQVGIN-CLK--SNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGS 391 (477)
Q Consensus 315 ~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~-~~~--~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~ 391 (477)
- ++ .+..++++++-++|.++|++++.. ... ..-|+++-+.+.... . ...++..+++ .||.+.+..
T Consensus 330 l---~~--~~~~~~~~~~~~~l~~~L~~l~~~~~i~~vrg~G~~~~i~~~~~~---~---~~~~~~~l~~-~Gv~~~~~~ 397 (427)
T TIGR00508 330 L---LE--GEWQKQVSAIENQLKRELSPLRKNPVVKDVRVLGAIGVVEMYKPV---N---VEELQKKFVE-QGVWIRPFG 397 (427)
T ss_pred H---Hh--CCHHHHHHHHHHHHHHHHHHhhcCCCEEeEeccccEEEEEECCcc---C---HHHHHHHHHH-CCeEEEecC
Confidence 1 10 112344555556666666655311 111 123567777765211 1 1245666654 599997542
Q ss_pred CCCCCCCCEEEEEeccC-CHHHHHHHHHHHHHHHhh
Q 011801 392 SFQCTEPGWFRVCFANM-DDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 392 ~f~~~~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~~ 426 (477)
..+|++.... ++++++++++++.+++.+
T Consensus 398 -------~~l~~~ppl~~t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 398 -------KLIYVMPPYIITTEQLQKLTAALIEALHE 426 (427)
T ss_pred -------CEEEEECCCCCCHHHHHHHHHHHHHHHhc
Confidence 2689988753 999999999999999865
No 345
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.44 E-value=1.6e-10 Score=120.05 Aligned_cols=357 Identities=11% Similarity=0.057 Sum_probs=187.5
Q ss_pred CCCCccccccccc--cccc--cHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCcc
Q 011801 34 TQNPGGVIQLGLA--ENQL--CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTF 109 (477)
Q Consensus 34 ~~~~~~~i~l~~~--~n~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~ 109 (477)
+.+.+.+||+..+ ...+ +.+.+.+.+++.-+. ....+... -..+.+..+|+.+.+..+.. ..
T Consensus 54 D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~------------~~~~~~~~-~~~~~~~~lAe~L~~~~p~~-~~ 119 (459)
T PRK06931 54 DVEGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTS------------GLPLHTLD-LTTPLKDAFSEYLLSLLPGQ-GK 119 (459)
T ss_pred eCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhh------------hccccccc-cCCHHHHHHHHHHHHhCCCc-cc
Confidence 4455667888554 2333 346666666553110 01011100 12355556666665432100 00
Q ss_pred CCCcEEEeCChHHHHHHHHHHh--cCCCCeEEEcCCCccchHHHHhhhCCc------------EEEEEeccCC--CCcc-
Q 011801 110 DPDRIVMGGGATGANELIMFCL--ANPGDAFLVPSPYYAAFDRDLSWRTGV------------QIVPVHCDIS--NNFK- 172 (477)
Q Consensus 110 ~~~~i~~t~G~t~al~~i~~~l--~~~Gd~vlv~~P~y~~~~~~~~~~~g~------------~~~~v~~~~~--~~f~- 172 (477)
+...+++++++++|++.+++.. .....+|+...-+|++....+-..+|. .+..++.... ..|.
T Consensus 120 ~~~~~f~~~SGsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (459)
T PRK06931 120 EYCLQFTGPSGADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGI 199 (459)
T ss_pred cceEEEeCCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccC
Confidence 0113455689999999988763 223367888888888765433211111 1222222110 0111
Q ss_pred ---cCHHHHHHHHHHHHH----hCCCeeEEEEeCCCCCcccC-CCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcc
Q 011801 173 ---ITREALEAAYERAQE----ASINIKGLIITNPSNPLGTT-LDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFT 244 (477)
Q Consensus 173 ---i~~~~l~~~~~~~~~----~~~~~k~vii~nP~NPtG~~-~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~ 244 (477)
-+.+++++.+++... ...++.+||+.--..-.|.+ .+.+-+++|.++|+++|+++|.||+..++.-.+..+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~- 278 (459)
T PRK06931 200 GGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMF- 278 (459)
T ss_pred CchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHH-
Confidence 123344333333221 12357776664333344654 567789999999999999999999998753333221
Q ss_pred cHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHH--h-cccCCCchHHHHHHHHhcC---ChhhH
Q 011801 245 SVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRK--M-SSFGLVSSQTQYLLASMLS---DDEFV 318 (477)
Q Consensus 245 s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~--~-~~~~~vs~~~q~~~~~~L~---~~~~~ 318 (477)
. .+..+..+| + -+++|.+| .|+.+|.+++.++ + +.... . ..|+ .++++..++.+.|+ +.+.
T Consensus 279 a----~~~~gv~PD--i--vt~gK~l~-gG~Pi~av~~~~~-~-~~~~~~~~~~T~~-gnpla~aaala~L~~l~~~~l- 345 (459)
T PRK06931 279 A----FEHAGIEPD--I--IVMSKAVG-GGLPLAVLGIKKE-F-DAWQPGGHTGTFR-GNQLAMATGLTTLKILKEENL- 345 (459)
T ss_pred H----hhhcCCCCC--E--EEeccccc-CCcceeeeeeHHH-H-hhccCCCCCCCCC-CCHHHHHHHHHHHHHHHhCCH-
Confidence 1 111122334 2 36799999 8999998887543 3 32211 1 2222 55666665555554 3332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchhhc------c--CchHHHHHHHHHHHhcCeEEeCC
Q 011801 319 DNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKE------K--TLEGEIALWRTIVNDVKLNVSPG 390 (477)
Q Consensus 319 ~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~------~--~~~~e~~l~~~ll~~~gI~v~pg 390 (477)
-++.++.-++++++.+.+ .++.++...-..-|+++.+.+...... . .......++..++ +.||++.++
T Consensus 346 ~~~~~~~G~~l~~~L~~l---~~~~~~i~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~ 421 (459)
T PRK06931 346 AQNAAERGEWLKAQLAEL---QKRYPCIGNVRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACF-ENGLLLERG 421 (459)
T ss_pred HHHHHHHHHHHHHHHHHH---HHhCCCeEeEecCceEEEEEEccCcccccccccCCccHHHHHHHHHHHH-HCCcEEeec
Confidence 222333333333332222 223343222334567887877431110 0 0111224555555 469999875
Q ss_pred CCCCCCCCCEEEEEeccC-CHHHHHHHHHHHHHHHhh
Q 011801 391 SSFQCTEPGWFRVCFANM-DDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 391 ~~f~~~~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~~ 426 (477)
.. ..+.+|+..+.. ++++++++++++.+++.+
T Consensus 422 ~~----~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~ 454 (459)
T PRK06931 422 GR----NGNVVRLLPPLLITQAECEEFIDRFEQALLA 454 (459)
T ss_pred CC----CCCEEEEECCCCcCHHHHHHHHHHHHHHHHH
Confidence 32 135789888764 999999999999999865
No 346
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.42 E-value=5e-11 Score=127.15 Aligned_cols=169 Identities=14% Similarity=0.154 Sum_probs=119.4
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccC
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDI 167 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~ 167 (477)
..+..+.+|+.++ ....-++++|+|.++.+++.+++.+||.||++.-++-.....+.+. |+..+.+....
T Consensus 197 i~eAe~~AA~~fg---------Ad~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLils-ga~PVYl~P~r 266 (714)
T PRK15400 197 HKEAEEYIARVFN---------ADRSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMS-DVTPIYFRPTR 266 (714)
T ss_pred HHHHHHHHHHHhC---------CCcEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHc-CCeEEEecccc
Confidence 4566667777765 2346888999999999999999999999999999999888877776 99998887543
Q ss_pred CCCccc----C-----HHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccc-
Q 011801 168 SNNFKI----T-----REALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATV- 237 (477)
Q Consensus 168 ~~~f~i----~-----~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~- 237 (477)
+.|++ + .+.+++++++..+. .+++++++++| +-.|.+++ ++.|++.|..++ |++||+|.+..
T Consensus 267 -n~~Gi~g~I~~~~~~~e~i~~~i~~~p~a-k~p~~~vit~p-TYdG~~yd---~~~I~~~~~~~~--ilvDEAwgah~~ 338 (714)
T PRK15400 267 -NAYGILGGIPQSEFQHATIAKRVKETPNA-TWPVHAVITNS-TYDGLLYN---TDFIKKTLDVKS--IHFDSAWVPYTN 338 (714)
T ss_pred -cccCCccCCCccccCHHHHHHHHHhCccc-cCccEEEEECC-CCccEecC---HHHHHHHhCCCC--EEEEccchhhhc
Confidence 34433 5 78888888764311 13347899998 77899999 677777777777 68999998752
Q ss_pred cCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEE
Q 011801 238 FSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVG 278 (477)
Q Consensus 238 ~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG 278 (477)
|.. .+.....+.. .....+.++++.|.+|.+ ||+.-+
T Consensus 339 F~p-~~~~~sam~~-ga~~~~~i~vtQStHKtL--~alTQa 375 (714)
T PRK15400 339 FSP-IYEGKCGMSG-GRVEGKVIYETQSTHKLL--AAFSQA 375 (714)
T ss_pred cCc-ccCCcChhhc-CCCCCCceEEEEchhhcc--cchhHH
Confidence 332 2211111111 000125568899999988 565543
No 347
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.42 E-value=8.3e-11 Score=127.91 Aligned_cols=320 Identities=16% Similarity=0.165 Sum_probs=189.4
Q ss_pred cccccccccCC---CCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeC-ChHHHHHHHHHHh----cCC----CCeEEEc
Q 011801 74 EVFKDIAIFQD---YHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGG-GATGANELIMFCL----ANP----GDAFLVP 141 (477)
Q Consensus 74 ~~~~~~~~Y~~---~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~-G~t~al~~i~~~l----~~~----Gd~vlv~ 141 (477)
.+|....-|+| .+|..++...+.+++.+..| .+ .+-+-. +++.+..+.+.++ ..+ .+.|+++
T Consensus 524 ~eF~t~hPyqp~e~sQG~lq~i~elq~~l~eLtG----md--~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp 597 (954)
T PRK12566 524 PEFAQLHPFAPREQAEGYRAMIDELEAWLCAITG----FD--AICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIP 597 (954)
T ss_pred hhhhcCCCCCchhhhcCHHHHHHHHHHHHHHHHC----CC--eEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEec
Confidence 34555567888 67888888888888888766 22 233333 3444443444343 222 2567888
Q ss_pred CCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHH
Q 011801 142 SPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFIN 221 (477)
Q Consensus 142 ~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~ 221 (477)
.-.|+.....+... |++++.++++.+ ..+|+++|++.+++. +.++.+|++++|++-.+. .+.+++|+++|+
T Consensus 598 ~saHgtNpasa~~~-GieVv~Vp~D~~--G~iDle~L~a~I~~~---~~~laaVmiT~Pnt~Gv~---e~~V~eI~~iah 668 (954)
T PRK12566 598 SSAHGTNPASAQMA-GMRVVIVECDPD--GNVDLDDLKAKAAAA---GDRLSCLMITYPSTHGVY---EEGIREICEVVH 668 (954)
T ss_pred ccccccCHHHHHHC-CCEEEEeccCCC--CCcCHHHHHHHhhcc---CCCEEEEEEEecCcCcee---cchHHHHHHHHH
Confidence 77674433445555 999999999853 379999999998632 347888889988766544 345999999999
Q ss_pred hcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCC----CceEEEEEeCCHHHHHHHHHhc--
Q 011801 222 DKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLP----GFRVGIVYSFNDTVVNCGRKMS-- 295 (477)
Q Consensus 222 ~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~----G~RvG~i~~~~~~i~~~~~~~~-- 295 (477)
++|+++++|.+... ..-...... ..+..+++++++|+|+.| |.-+|.+... +.+...+..+.
T Consensus 669 ~~Galv~vDgA~~~---a~~~l~~Pg--------~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~-~~L~pfLp~~P~~ 736 (954)
T PRK12566 669 QHGGQVYMDGANLN---AQVGLARPA--------DIGADVSHMNLHKTFCIPHGGGGPGMGPIGVR-AHLAPFVANHPVV 736 (954)
T ss_pred HcCCEEEEEeeChh---hccCCCChh--------hcCCCEEEecCCcccCcCccCCCCccchhhhh-hhhhhhccCCCCc
Confidence 99999999999862 111111111 235568889999988522 3445554442 22333333221
Q ss_pred -------ccCCCch--HHH----HHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEecCCceEE--EEee
Q 011801 296 -------SFGLVSS--QTQ----YLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLKSNAGLF--FWMD 359 (477)
Q Consensus 296 -------~~~~vs~--~~q----~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~~~~g~~--~~~~ 359 (477)
..+.+|. ..| ..+..++..-. .+ +.+.......+..++.+.|.+. ++.+.+.++-+| +.++
T Consensus 737 d~~G~~~r~ga~S~~~~gsa~~l~~A~~Yi~~lG--~e-Lk~aa~~ailnAnYla~rL~~~~~v~~~~~~~~~~hEfii~ 813 (954)
T PRK12566 737 PVEGPDPNNGAVSAAPWGSASILPISWMYIAMMG--PQ-LADASEVAILSANYLANQLGGAFPVLYRGRNERVAHECILD 813 (954)
T ss_pred CCCCCCCCCCceeecccchHHHHHHHHHHHHHHC--HH-HHHHHHHHHHHHHHHHHHhHhhCCCCcCCCCCCeeeEEEEE
Confidence 0111111 111 11222222212 12 4444444455667888888663 444422222111 2345
Q ss_pred ccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccC-CHHHHHHHHHHHHHHHhhhh
Q 011801 360 LRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANM-DDDTLQVALNRIAAFVQQDK 428 (477)
Q Consensus 360 l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~~~~ 428 (477)
++...+....+ ..++.++|+ ++||..- ...| + .++++||+.... +.+++|+++++|+.+.++.+
T Consensus 814 ~~~l~~~~g~~-~~dvakRL~-d~Gihap-t~~f-P-v~~~LmIepTE~eskeEIDrf~eAL~~I~~e~~ 878 (954)
T PRK12566 814 LRPLKAQTGIS-EEDVAKRLM-DYGFHAP-TMSF-P-VPGTLMVEPTESESKAELDRFVEAMLSIRAEIG 878 (954)
T ss_pred ccccccccCCC-HHHHHHHHH-HCCcEEe-EEee-c-cCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHH
Confidence 54332222222 235788888 7798753 3333 2 478899999765 89999999999999887643
No 348
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.42 E-value=9.8e-11 Score=128.11 Aligned_cols=305 Identities=18% Similarity=0.201 Sum_probs=184.6
Q ss_pred CCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhc--------CCCCeEEEcCCCccchHHHHhhhCC
Q 011801 86 HGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLA--------NPGDAFLVPSPYYAAFDRDLSWRTG 157 (477)
Q Consensus 86 ~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~--------~~Gd~vlv~~P~y~~~~~~~~~~~g 157 (477)
+|..++...+.+|+.+..| ++...+ ..+|++.|..+.+.++. ...+.|+++.-.++.....+... |
T Consensus 526 qG~lq~i~elq~~l~eltG----md~~Sl-~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~~-G 599 (939)
T TIGR00461 526 EGYQELIAQLEKWLCSITG----FDAISL-QPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAMA-G 599 (939)
T ss_pred HHHHHHHHHHHHHHHHHHC----CCCccc-CCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHHC-C
Confidence 4666778888888888776 443223 33444544443333321 12357889988886555556666 9
Q ss_pred cEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccc
Q 011801 158 VQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATV 237 (477)
Q Consensus 158 ~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~ 237 (477)
++++.++++. +..+|+++|++++++ ++.++++|++++|+| +|.+-+ .+++|+++|+++|.++++|.++..-.
T Consensus 600 ~~Vv~V~~d~--~G~iDle~L~~~i~~---~~~~taaV~iT~pst-~G~~e~--~I~eI~~iah~~G~~v~VDgAq~~al 671 (939)
T TIGR00461 600 MQVVPVNCDQ--DGNIDLVDLKNKAEQ---HGDELAAVMVTYPST-HGVFEP--TIQHACDIVHSFGGQVYLDGANMNAQ 671 (939)
T ss_pred CEEEEeccCC--CCCcCHHHHHHHHhh---cCCceEEEEEEeCCc-Cceecc--cHHHHHHHHHHcCCEEEEEecChhhC
Confidence 9999999874 457999999999975 245899999999999 788754 38899999999999999999995311
Q ss_pred cCCCCcccHHHhhhhccCCCCcEEEEecCCcccC----CCCceEEEEEeCCHHHHHHHHH--h----------cccCCCc
Q 011801 238 FSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMG----LPGFRVGIVYSFNDTVVNCGRK--M----------SSFGLVS 301 (477)
Q Consensus 238 ~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g----~~G~RvG~i~~~~~~i~~~~~~--~----------~~~~~vs 301 (477)
..- ... . ..+..++++|.+|.|+ ..|-.+|++.+.++ +...+-. + ...+.++
T Consensus 672 ~~l---~~P----g----~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~-L~~~lPg~~v~~t~d~~greq~Iga~s 739 (939)
T TIGR00461 672 VGL---TSP----G----DLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSH-LIPFLPKHDVVSMITGIGGSKSIGSVS 739 (939)
T ss_pred CCC---CCc----c----ccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhh-chhhcCCCcccccccCCCCcccccccc
Confidence 110 110 1 2355678889999765 35566899988643 2222110 0 0001111
Q ss_pred h---------HHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecC-CceEE---EEeeccchhhccC
Q 011801 302 S---------QTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKS-NAGLF---FWMDLRHLLKEKT 368 (477)
Q Consensus 302 ~---------~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~-~~g~~---~~~~l~~~~~~~~ 368 (477)
+ +..++-..++.... +++..+..-.+..++.+.|.+ ++++.-+ ..+.+ +.++++.......
T Consensus 740 ~~~~g~a~~~l~a~~yi~~lG~~G-----L~~~a~~ailnAnYl~~rL~~-~~~~l~~~~~~~~~hEfv~~~~~~~~~~g 813 (939)
T TIGR00461 740 AAPYGSASILPISWMYIKMMGNEG-----LPKASVVAILNANYMATRLKD-HYPILFVGTLKHVAHECILDLRPLKAKTG 813 (939)
T ss_pred ccccCcHHHHHHHHHHHHHHCHHH-----HHHHHHHHHHHHHHHHHHhhc-cCcccccCCCCceeEEEEEeccchhhhcC
Confidence 1 11122223333333 445555555667888888876 4444332 22231 3456664322222
Q ss_pred chHHHHHHHHHHHhcCeEEeCCCCCCCCCCC--EEEEEeccCCHHHHHHHHHHHHHHHhhhh
Q 011801 369 LEGEIALWRTIVNDVKLNVSPGSSFQCTEPG--WFRVCFANMDDDTLQVALNRIAAFVQQDK 428 (477)
Q Consensus 369 ~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~--~~Rl~~~~~~~e~l~~~l~~l~~~~~~~~ 428 (477)
.. ..++.++|++. |+.- |-..|. ..+ .+|.+-.. +.+++|++++.+.++.++.+
T Consensus 814 ~~-~~dIakrL~d~-G~ha-pt~~~p--v~g~lmiepTE~e-skeelD~f~~al~~I~~e~~ 869 (939)
T TIGR00461 814 IE-AIDVAKRLQDY-GFHA-PTLSFP--VPGTLMVEPTESE-SLEELDRFCDAMIAIKEEIN 869 (939)
T ss_pred CC-HHHHHHHHHhC-Ceec-cccCCc--cCCeEEEEeeccC-CHHHHHHHHHHHHHHHHHHH
Confidence 22 34677888765 9863 333333 233 35555543 88999999999988876544
No 349
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.41 E-value=6.9e-11 Score=118.93 Aligned_cols=274 Identities=11% Similarity=0.101 Sum_probs=167.6
Q ss_pred cEEEeCChHHHHHHHHHHhc-CCCCeEEEcCCCccch-H-HHHhhhCCc-EEEEEeccCCCCcccCHHHHHHHHHHHHHh
Q 011801 113 RIVMGGGATGANELIMFCLA-NPGDAFLVPSPYYAAF-D-RDLSWRTGV-QIVPVHCDISNNFKITREALEAAYERAQEA 188 (477)
Q Consensus 113 ~i~~t~G~t~al~~i~~~l~-~~Gd~vlv~~P~y~~~-~-~~~~~~~g~-~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~ 188 (477)
-+++++|+|.+++.++..++ ++|+++|+.. .|..- . ..++.. |+ ++..+..+. +-.+++++++.
T Consensus 60 v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG~r~~~eia~~~-g~~~v~~l~~~~--g~~~~~~~ve~-------- 127 (374)
T TIGR01365 60 IGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFGKGWVTDVTKQL-KLPDVRVLEAEY--GKLPDLKKVDF-------- 127 (374)
T ss_pred EEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHHHHHHHHHHHhc-CCCCcEEEcCCC--CCCCCHHHcCC--------
Confidence 36779999999999999998 5899999876 55543 3 455555 88 466665443 33568888762
Q ss_pred CCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCc
Q 011801 189 SINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSK 268 (477)
Q Consensus 189 ~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK 268 (477)
+ +.|++++.-..||+..+. ++++..+ ++.++|+|.+-+ +.+.++ .+.. ..+++.|-.|
T Consensus 128 --~-~~v~~vhnETSTGv~npv---~~i~~~~--~~~lliVDavSs---~g~~~l-~~d~----------iDv~~tgsQK 185 (374)
T TIGR01365 128 --K-NDVVFTWNGTTSGVRVPN---GDFIPAD--REGLTICDATSA---AFAQDL-DYHK----------LDVVTFSWQK 185 (374)
T ss_pred --C-CCEEEecCCCchheeccc---ccccccc--CCCcEEEEccch---hcCCCC-ChhH----------CcEEEEechh
Confidence 1 126788777899999994 4444321 488999999987 555542 2222 2366788899
Q ss_pred ccCCCCceEEEEEeCCHHHHHHHH--------Hh-------------cccCCCchHHHHHHHHhcCChhhHHH--HHHHH
Q 011801 269 DMGLPGFRVGIVYSFNDTVVNCGR--------KM-------------SSFGLVSSQTQYLLASMLSDDEFVDN--FLVET 325 (477)
Q Consensus 269 ~~g~~G~RvG~i~~~~~~i~~~~~--------~~-------------~~~~~vs~~~q~~~~~~L~~~~~~~~--~~~~~ 325 (477)
.+|+|+ .+++++.+++.+..... .+ ....+.+++.-.++..++..-+++.+ -++..
T Consensus 186 ~L~~pp-Gls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~ 264 (374)
T TIGR01365 186 VLGGEG-AHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPL 264 (374)
T ss_pred ccCCCC-ceEEEEECHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHH
Confidence 999765 47778887776644221 10 00111222222222222221111111 26777
Q ss_pred HHHHHHHHHHHHHHHhhCC-CeEecC----CceEEEEeeccch-hh----ccCchHHHHHHHHHHHhcCeEEeCCCCCCC
Q 011801 326 SKRLAKRHHNFTKGLEQVG-INCLKS----NAGLFFWMDLRHL-LK----EKTLEGEIALWRTIVNDVKLNVSPGSSFQC 395 (477)
Q Consensus 326 ~~~l~~r~~~l~~~L~~~g-i~~~~~----~~g~~~~~~l~~~-~~----~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~ 395 (477)
.+|.++..+.+.++++++| +..... .+...+.+.++.. .+ ...++-..++ ...++++||.+.+|.. .
T Consensus 265 ~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~gi~i~~G~~--~ 341 (374)
T TIGR01365 265 IARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVVDPAIDALDEDAQADFAKEL-ISTLEKEGVAYDIGSY--R 341 (374)
T ss_pred HHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEeCCccccccccchhhHHHHHH-HHHHHHCCEEEecccc--c
Confidence 8888999999999999998 665542 1222333444321 11 0011111234 4445566999988753 2
Q ss_pred CCCCEEEEEe-ccCCHHHHHHHHHHHHHHH
Q 011801 396 TEPGWFRVCF-ANMDDDTLQVALNRIAAFV 424 (477)
Q Consensus 396 ~~~~~~Rl~~-~~~~~e~l~~~l~~l~~~~ 424 (477)
..+..|||+. +.+++++++.++..|.=+.
T Consensus 342 ~~~~~fRIg~~G~i~~~di~~l~~~l~~~~ 371 (374)
T TIGR01365 342 DAPSGLRIWCGATVEKSDLECLCPWLDWAF 371 (374)
T ss_pred cCCCceEEecCCcCCHHHHHHHHHHHHHHH
Confidence 3346899965 5579999999999987544
No 350
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.41 E-value=1.1e-10 Score=120.30 Aligned_cols=285 Identities=16% Similarity=0.185 Sum_probs=166.0
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCcc---c---hHHHHhhhCCcEEE
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYA---A---FDRDLSWRTGVQIV 161 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~---~---~~~~~~~~~g~~~~ 161 (477)
+..+++.+|++.+ .+..+++++++.|+.+++.+ +.+||.|++.+..|. + +...++.. |++++
T Consensus 124 ~~~le~~lA~l~g----------ae~alvv~sg~aAi~l~l~~-l~~GdeVIvs~~e~v~~ggs~~i~~~~~~~-G~~~~ 191 (454)
T TIGR00474 124 YSHVEGLLCELTG----------AEDALVVNNNAAAVLLALNT-LAKGKEVIVSRGELVEIGGSFRIPDVMEQS-GAKLV 191 (454)
T ss_pred HHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHHH-hCCcCEEEECCChhhhhcchhhHHHHHHHc-CCEEE
Confidence 4688889999886 23355677778889888865 478999999986642 2 12234545 99999
Q ss_pred EEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCc--c--cCCCHHHHHHHHHHHHhcCeEEEecccccccc
Q 011801 162 PVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPL--G--TTLDRDTLKSLVSFINDKNIHLVCDEIYAATV 237 (477)
Q Consensus 162 ~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPt--G--~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~ 237 (477)
.++.+. ..+++++++++.+ ++++|++.+++|++ | ...+ +++|+++|+++|+.+|+|.....+.
T Consensus 192 ~v~~~~----~~~l~dle~aI~~------~T~lv~~~h~sN~~~~G~~~~~d---l~~I~~la~~~g~~vivD~~sG~l~ 258 (454)
T TIGR00474 192 EVGTTN----RTHLKDYEDAITE------NTALLLKVHTSNYRIVGFTEEVS---IAELVALGREHGLPVMEDLGSGSLV 258 (454)
T ss_pred EeCCCC----CCCHHHHHHhcCc------CCEEEEEEccCcccccCCCCCCC---HHHHHHHHHHcCCeEEEECCCcccc
Confidence 887542 2478889988854 79999999999995 6 4667 8889999999999999997632110
Q ss_pred ----cCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhccc--CCCchH----HHHH
Q 011801 238 ----FSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSF--GLVSSQ----TQYL 307 (477)
Q Consensus 238 ----~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~~~--~~vs~~----~q~~ 307 (477)
|+-+....+.... ..+..++++|.+|.+|-| ..|++++.++.+. .+++..-. .-+.-. .+..
T Consensus 259 ~~~~~gl~~~p~~~~~~-----~~GaDiv~fSg~K~LgGp--~~G~i~g~~~~i~-~l~~~~l~r~lr~~k~~la~l~~~ 330 (454)
T TIGR00474 259 DLSRYGLPDEPTVQEVI-----AAGVDLVTFSGDKLLGGP--QAGIIVGKKELIE-RLKKNPLTRALRVDKLTLAALEAT 330 (454)
T ss_pred cchhccCCCCcccccHh-----HcCCCEEEecCccccCCC--eEEEEEECHHHHH-hhhhchhHHHHhhChHHHHHHHHH
Confidence 1100101111121 224458889999998634 5899999665442 22211000 001111 1223
Q ss_pred HHHhcCChh-hH----HHHHHHHHHHHHHHHHHHHHHHhhC---CC--eEecCC----ce---------EEEEeeccchh
Q 011801 308 LASMLSDDE-FV----DNFLVETSKRLAKRHHNFTKGLEQV---GI--NCLKSN----AG---------LFFWMDLRHLL 364 (477)
Q Consensus 308 ~~~~L~~~~-~~----~~~~~~~~~~l~~r~~~l~~~L~~~---gi--~~~~~~----~g---------~~~~~~l~~~~ 364 (477)
+..++...+ +. -+.+....+++.++...+.+.|++. ++ ++.+.. +| +-+-++.. ..
T Consensus 331 l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~ggg~~p~~~l~~~~v~~~~~-~~ 409 (454)
T TIGR00474 331 LRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAALGPGFELEIVPGLSQVGGGSLPDERLPSYAVTLTPD-GL 409 (454)
T ss_pred HHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhccCCceEEEEEcCCcccCCCCcCCCCCeEEEEEecC-CC
Confidence 333333221 11 1223333456667777788888763 22 333222 12 12222211 11
Q ss_pred hccCchHHHHHHHHHHHhcC--eEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHH
Q 011801 365 KEKTLEGEIALWRTIVNDVK--LNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRI 420 (477)
Q Consensus 365 ~~~~~~~e~~l~~~ll~~~g--I~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l 420 (477)
+ ..++.+ .+++.. |..+ ..++.+-+-+..+.+++++.++++|
T Consensus 410 ~------~~~l~~-~lr~~~~~ii~r-------~~~~~~~ld~r~~~~~~~~~~~~~~ 453 (454)
T TIGR00474 410 S------AEKLEA-RLRELPPPIIGR-------IEDDRFLLDLRTLLEDEEELLIEAL 453 (454)
T ss_pred C------HHHHHH-HHhcCCCCEEEE-------EECCEEEEEeCcCCHHHHHHHHHHh
Confidence 1 113433 344434 3332 3467788888877888888888776
No 351
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.40 E-value=6.2e-12 Score=123.29 Aligned_cols=297 Identities=20% Similarity=0.215 Sum_probs=194.4
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccC
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDI 167 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~ 167 (477)
..++.+.+|+|++. ++.+++.-| -..+...+.+|++||.-|+-..-.+..+...++.. |+.+.-+..+
T Consensus 184 hkelE~l~A~f~g~---------e~a~vF~mG-f~TNs~~~p~l~~~gsLIiSDelNHaSi~~GaRLS-gAtiRVfkHN- 251 (519)
T KOG1357|consen 184 HKELEELVARFLGV---------EDAIVFSMG-FATNSMNIPSLLGKGSLIISDELNHASLITGARLS-GATTRVFRHN- 251 (519)
T ss_pred HHHHHHHHHHhcCC---------cceEEEecc-ccccccCcceeecCCcceeeccccchheecccccc-CceEEEEecC-
Confidence 57899999999873 677888777 55677788899999999999998898888778877 8887766643
Q ss_pred CCCcccCHHHHHHHHHHHHHhC-CCe-----eEEEE-eCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCC
Q 011801 168 SNNFKITREALEAAYERAQEAS-INI-----KGLII-TNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSS 240 (477)
Q Consensus 168 ~~~f~i~~~~l~~~~~~~~~~~-~~~-----k~vii-~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~ 240 (477)
|...||+.++++...+ +++ |.+++ ..-..--|.+.. +.+++++++++..+++.||+++.-..+
T Consensus 252 ------dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~---Lp~vvalkkkykayl~lDEAHSiGA~g- 321 (519)
T KOG1357|consen 252 ------DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVD---LPEVVALKKKYKAYLYLDEAHSIGAMG- 321 (519)
T ss_pred ------CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecc---cHHHHHhhccccEEEEeeccccccccC-
Confidence 5778888887654322 111 22222 233456677766 888999999999999999999854332
Q ss_pred CCcccHHHhhhhccC-CCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhcc---cC--CCchHHHHHHHHhcC-
Q 011801 241 PKFTSVAEVIQEMDC-NRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSS---FG--LVSSQTQYLLASMLS- 313 (477)
Q Consensus 241 ~~~~s~~~~~~~~~~-~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~~---~~--~vs~~~q~~~~~~L~- 313 (477)
+....+.++.. + ..+..+.+++|.|++|..| ||+.++++ +++.++..+. +. ..++.+|+.+..+.-
T Consensus 322 ~tGrgvce~~g---~d~~dvDImMGtftKSfga~G---Gyiagsk~-lid~lrt~s~~~~yat~~sppvaqq~~ssl~~i 394 (519)
T KOG1357|consen 322 ATGRGVCEYFG---VDPEDVDIMMGTFTKSFGAAG---GYIAGSKE-LIDYLRTPSPSALYATSLSPPVAQQILTSVKHI 394 (519)
T ss_pred CCCcceeeccC---CCchhheeecceehhhccccc---ceecCcHH-HHhhhccCCCceeecccCChHHHHHHHHHHHhh
Confidence 22223322221 1 2355677899999999888 89888554 5555543322 11 133456665544322
Q ss_pred -ChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEe--eccchhhccCchHHHHHHHHHHHhcCeEEeCC
Q 011801 314 -DDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWM--DLRHLLKEKTLEGEIALWRTIVNDVKLNVSPG 390 (477)
Q Consensus 314 -~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~--~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg 390 (477)
..+. .+.-++..++++++..++...|++.|+-++..+....+-+ -.+.... .+-+.++++ +|.+.-+
T Consensus 395 ~G~dg-t~~g~~k~~~l~~ns~yfr~~l~~~gfivyG~~dSpVvplll~~~~k~~--------~f~r~~l~~-nigvVvv 464 (519)
T KOG1357|consen 395 MGEDG-TNRGRQKIERLAENSRYFRWELQKMGFIVYGNNDSPVVPLLLYGPAKIV--------AFSREMLER-NIGVVVV 464 (519)
T ss_pred cCCCc-ccHHHHHHHHHHhhhHHHHHhhhcCcEEEecCCCCCcceeeecCccccc--------HHHHHHHhc-CceEEEE
Confidence 2222 3445677788999999999999999988887666533222 1221111 344566655 5544322
Q ss_pred CCCC--CCCCCEEEEEeccC-CHHHHHHHHHHHHHHH
Q 011801 391 SSFQ--CTEPGWFRVCFANM-DDDTLQVALNRIAAFV 424 (477)
Q Consensus 391 ~~f~--~~~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~ 424 (477)
.|. +.-.+.+|+|.+.. +.|+++.+++.+.+.=
T Consensus 465 -gfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~g 500 (519)
T KOG1357|consen 465 -GFPATPLLESRARFCLSASHTKEDLDRALEVIDRVG 500 (519)
T ss_pred -eCCCchHHHhHHHhhhcccccHHHHHHHHHHHhhhc
Confidence 233 23356789999764 8899999888877654
No 352
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.40 E-value=1.1e-10 Score=124.77 Aligned_cols=176 Identities=16% Similarity=0.189 Sum_probs=121.7
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHH-HhhhCCcEEEEEecc
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRD-LSWRTGVQIVPVHCD 166 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~-~~~~~g~~~~~v~~~ 166 (477)
..+..+.+|+.++ ....-+++||+|.++.+++.+++.+||.||++.-++-..... +.+. |+..+.+...
T Consensus 176 i~eAq~~AA~~fg---------Ad~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLiLs-Ga~PVYl~P~ 245 (720)
T PRK13578 176 AKDAQKHAAKVFN---------ADKTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQA-GATPVYLETA 245 (720)
T ss_pred HHHHHHHHHHHhC---------CCceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHHc-CCeEEEeecc
Confidence 4566666777775 234688899999999999999999999999999999988774 6666 9999888754
Q ss_pred CCCCcc----cCHHH-----HHHHHHHH-HH---hCCCeeEEEEeCCCCCcccCCCHHHHHHHHHH-HHhcCeEEEeccc
Q 011801 167 ISNNFK----ITREA-----LEAAYERA-QE---ASINIKGLIITNPSNPLGTTLDRDTLKSLVSF-INDKNIHLVCDEI 232 (477)
Q Consensus 167 ~~~~f~----i~~~~-----l~~~~~~~-~~---~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~-~~~~~~~lI~De~ 232 (477)
- +.|+ ++.+. +++++++. .+ .....|++++++| +-.|.+++ ++.|++. ++.++ .|++||+
T Consensus 246 ~-n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~p-TYdG~~yd---i~~I~~~~~h~~~-~llvDEA 319 (720)
T PRK13578 246 R-NPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLG-TYDGTIYN---ARQVVDKIGHLCD-YILFDSA 319 (720)
T ss_pred c-cccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECC-CCcceeec---HHHHHHHhhccCC-cEEEeCc
Confidence 3 3344 35444 78777654 11 0112589999988 66899999 7777777 56677 8999999
Q ss_pred ccccc-cCCC--CcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEE-EEEeCC
Q 011801 233 YAATV-FSSP--KFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVG-IVYSFN 284 (477)
Q Consensus 233 y~~~~-~~~~--~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG-~i~~~~ 284 (477)
|.+.. |... .+.... + . .+-+...++++.|.+|.+ |++--+ +|...+
T Consensus 320 hgah~~F~p~~~~~p~~a-l-~-~GaD~p~i~v~QStHKtL--~alTQaS~LHvk~ 370 (720)
T PRK13578 320 WVGYEQFIPMMADCSPLL-L-E-LNENDPGIFVTQSVHKQQ--AGFSQTSQIHKKD 370 (720)
T ss_pred chhhhccCcccccCChhh-h-h-cCCCCCCeEEEEChhhcc--hhhhhHhhhhcCC
Confidence 98752 4321 122111 1 1 111223468899999988 566544 454533
No 353
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.40 E-value=8.9e-11 Score=118.67 Aligned_cols=260 Identities=15% Similarity=0.174 Sum_probs=163.5
Q ss_pred ccCCCCCcHHHHHHHHHHHhcccCCCCcc---CCCcEEEeCChHHHHHHHHHHhcC--------CC-----C-eEEEcCC
Q 011801 81 IFQDYHGLPEFRQAVAKFMGKGRGGRVTF---DPDRIVMGGGATGANELIMFCLAN--------PG-----D-AFLVPSP 143 (477)
Q Consensus 81 ~Y~~~~G~~~lr~aia~~~~~~~g~~~~~---~~~~i~~t~G~t~al~~i~~~l~~--------~G-----d-~vlv~~P 143 (477)
.|...+...++.+.+.+|+.+..|.+-.. ....-++|+|+|+++..++.+..+ .| . .|++.+-
T Consensus 70 ~~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~ 149 (373)
T PF00282_consen 70 TWEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQ 149 (373)
T ss_dssp STTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETT
T ss_pred ccccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccc
Confidence 34334457899999999999988743211 124678999999999887755311 12 2 4556665
Q ss_pred CccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc
Q 011801 144 YYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDK 223 (477)
Q Consensus 144 ~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~ 223 (477)
++..+...+.+. |+.++.|++++ ++++|+++|++++++..++|..+-+|+.+-.+..||.+=+ +++|.++|+++
T Consensus 150 aH~S~~Kaa~~l-Glg~~~I~~~~--~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~---l~~i~~i~~~~ 223 (373)
T PF00282_consen 150 AHYSIEKAARIL-GLGVRKIPTDE--DGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDP---LEEIADICEKY 223 (373)
T ss_dssp S-THHHHHHHHT-TSEEEEE-BBT--TSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-S---HHHHHHHHHHC
T ss_pred cccHHHHhccee-eeEEEEecCCc--chhhhHHHhhhhhcccccccccceeeeccCCCcccccccC---HHHHhhhcccc
Confidence 788888888887 99999999985 6789999999999987766655556777778889999966 88899999999
Q ss_pred CeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHH-HHHHhccc-----
Q 011801 224 NIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVN-CGRKMSSF----- 297 (477)
Q Consensus 224 ~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~-~~~~~~~~----- 297 (477)
|+|+.+|.+|++..+-.+.+......++ .-+ -+.-+++|.++ ..+.+|+++..++.... .......|
T Consensus 224 ~~wlHVDaA~gg~~~~~~~~~~~~~gi~----~ad--Sit~d~HK~l~-~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~ 296 (373)
T PF00282_consen 224 NIWLHVDAAYGGSALLSPEYRHLLFGIE----RAD--SITIDPHKWLG-VPYGCGVLLVRDKSDLRDAFSINADYLGNDD 296 (373)
T ss_dssp T-EEEEEETTGGGGGGHCTTGGGGTTGG----GES--EEEEETTTTTS--SSS-EEEEESSGGGHHGGGEEEETCTT-S-
T ss_pred ceeeeecccccccccccccccccccccc----ccc--ccccchhhhhc-CCccceeEEeecccchHHHhccChhhhcccc
Confidence 9999999999984443333333222222 112 34459999997 66799999998765432 22111111
Q ss_pred ------------C-CCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEec-CCceE
Q 011801 298 ------------G-LVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLK-SNAGL 354 (477)
Q Consensus 298 ------------~-~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~-~~~g~ 354 (477)
+ ..|. ...++..++.-..+=.+-+++..++..+..+++.+.|++. ++++.. +.-+.
T Consensus 297 ~~~~~~~~~~~~tl~~SR-~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~~~ 367 (373)
T PF00282_consen 297 RESDESYDYGDYTLQGSR-RFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPDLNI 367 (373)
T ss_dssp SSS-GGGCEEEGSSSSSG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSSSE
T ss_pred cccccccccccccccccc-cchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCceE
Confidence 1 1122 2222222222111112234555666667778899999887 466653 44443
No 354
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.38 E-value=2.9e-10 Score=121.39 Aligned_cols=174 Identities=15% Similarity=0.174 Sum_probs=119.2
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccC
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDI 167 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~ 167 (477)
..+..+.+|+.++ ....-++++|+|.++.+++.+++.+||.||++.-++-.....+.+. |+..+.+....
T Consensus 197 i~eAe~~aA~~fg---------Ad~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLils-ga~PVYl~P~~ 266 (713)
T PRK15399 197 HLEAEEYIARTFG---------AEQSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMS-DVVPIWLKPTR 266 (713)
T ss_pred HHHHHHHHHHHhC---------CCcEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHc-CCeeEEecccc
Confidence 4566666777765 2346888999999999999999999999999999999888877776 99988886443
Q ss_pred CCCcc----cCH-----HHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEE-Eecccccccc
Q 011801 168 SNNFK----ITR-----EALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHL-VCDEIYAATV 237 (477)
Q Consensus 168 ~~~f~----i~~-----~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~l-I~De~y~~~~ 237 (477)
+.|+ ++. +.+++++++..+. .+++++++++| +-.|.+++ ++.|++.| |+.+ ++||+|.+..
T Consensus 267 -n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~-~~p~~vvit~p-TYdGi~yd---~~~I~~~~---g~~~ilvDEAhgah~ 337 (713)
T PRK15399 267 -NALGILGGIPRREFTRDSIEEKVAATTQA-QWPVHAVITNS-TYDGLLYN---TDWIKQTL---DVPSIHFDSAWVPYT 337 (713)
T ss_pred -cccCCcCCCChhhccHHHHHHHHHhCCCc-CCceEEEEECC-CCCceeeC---HHHHHHHh---CCCEEEEeccchhhh
Confidence 3443 345 8888888764321 24578999999 77899999 55566666 4555 6999998752
Q ss_pred -cCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEE-EEEeCC
Q 011801 238 -FSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVG-IVYSFN 284 (477)
Q Consensus 238 -~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG-~i~~~~ 284 (477)
|.. .+.+...+... +.....++++.|.+|.+ |++.-+ +|....
T Consensus 338 ~F~p-~~~~~sam~~~-~~aD~~i~~tQStHKtL--~alTQaS~iHvk~ 382 (713)
T PRK15399 338 HFHP-IYQGKSGMSGE-RVPGKVIFETQSTHKML--AAFSQASLIHIKG 382 (713)
T ss_pred hcCc-ccCCcChhhCC-CCCCeeeeeeeehhccc--cccchheeeeecC
Confidence 332 12212222110 00123345689999988 676644 455533
No 355
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.33 E-value=6e-10 Score=115.15 Aligned_cols=331 Identities=11% Similarity=0.143 Sum_probs=166.9
Q ss_pred CCCCCCccccccccc--cccc--cHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCC
Q 011801 32 HPTQNPGGVIQLGLA--ENQL--CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRV 107 (477)
Q Consensus 32 ~~~~~~~~~i~l~~~--~n~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~ 107 (477)
..+.+.+..||+..+ .+.+ +.+.+.+++++.-+ ....|... ...+..+|+.+.+...
T Consensus 42 l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~-------------~~~~~~~~---~~~~~~la~~l~~~~p--- 102 (431)
T PRK06209 42 VWDVDGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQ-------------DGCNFTRP---SAIELDAAESFLELID--- 102 (431)
T ss_pred EEeCCCCEEEEccccccchhcCCCCHHHHHHHHHHHH-------------hCcCCCCC---CHHHHHHHHHHHHhCC---
Confidence 334556677888543 3444 34667776666321 12223211 2233334444433211
Q ss_pred ccCCCcEEEeCChHHHHHHHHHHhc-CCC-CeEEEc-CCCccchHHHH----hhhCCcE--E--EEEeccCCCCcccCHH
Q 011801 108 TFDPDRIVMGGGATGANELIMFCLA-NPG-DAFLVP-SPYYAAFDRDL----SWRTGVQ--I--VPVHCDISNNFKITRE 176 (477)
Q Consensus 108 ~~~~~~i~~t~G~t~al~~i~~~l~-~~G-d~vlv~-~P~y~~~~~~~----~~~~g~~--~--~~v~~~~~~~f~i~~~ 176 (477)
..+.+++++++++|++.+++.-. -.| ..|+.. .-.|.++.... ....|.. . ..+.+. + -|++
T Consensus 103 --~~~~v~f~~sGseA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~----~-~d~~ 175 (431)
T PRK06209 103 --GADMVKFCKNGSDATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFR----Y-NDIA 175 (431)
T ss_pred --ccceEEEecCHHHHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhccccccC----C-CCHH
Confidence 13689999999999999987531 134 345443 22332211100 0000110 0 011111 1 1688
Q ss_pred HHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCC
Q 011801 177 ALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCN 256 (477)
Q Consensus 177 ~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~ 256 (477)
++++++++. ..++.+|++ -|. .|...+.+.+++|.++|++||+++|+||++.++.+.. ....... +..
T Consensus 176 ~l~~~l~~~---~~~~aavi~-Epv--~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~---~g~~~~~---gv~ 243 (431)
T PRK06209 176 SLEALFEDH---PGRIACVIL-EPA--TADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHM---RGAQKLY---GIV 243 (431)
T ss_pred HHHHHHHhC---CCCEEEEEE-ccc--cCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCc---chhhHHh---CCC
Confidence 898888642 225655555 452 3446778889999999999999999999997653221 1111111 112
Q ss_pred CCcEEEEecCCcccCCCCceEEEEEeCCHHHHHH--HHH---hccc-----CCCchHHHHHHHHhc---CChhhHHHHHH
Q 011801 257 RDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNC--GRK---MSSF-----GLVSSQTQYLLASML---SDDEFVDNFLV 323 (477)
Q Consensus 257 ~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~--~~~---~~~~-----~~vs~~~q~~~~~~L---~~~~~~~~~~~ 323 (477)
+| +.+++|.+| .|+.+|+++++++ +.+. ... ...+ ...+++...++.+.| .+.+.
T Consensus 244 PD----i~t~gK~lg-gG~p~~av~~~~~-i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~~------ 311 (431)
T PRK06209 244 PD----LSCFGKALG-NGFAVSALAGKRE-YMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDEDV------ 311 (431)
T ss_pred cc----eeeehhhhc-CCcccEEEEEHHH-HHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhccCH------
Confidence 33 357899999 7899999999554 4443 110 1111 112334433333333 23222
Q ss_pred HHHHHHHHHHHHHHHHHh----hCCCeEecCCceEEEEeecc--chhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCC
Q 011801 324 ETSKRLAKRHHNFTKGLE----QVGINCLKSNAGLFFWMDLR--HLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTE 397 (477)
Q Consensus 324 ~~~~~l~~r~~~l~~~L~----~~gi~~~~~~~g~~~~~~l~--~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~ 397 (477)
.+++.++-+++.+.|+ +.++.......|..+-+.+- .........-...+++.+++ .||.+.|
T Consensus 312 --~~~~~~~g~~l~~~L~~~~~~~~~~~~vr~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~p~-------- 380 (431)
T PRK06209 312 --IERLHEQGAKLAAGVNEAAAEHGLQDHVRVSGRPCCLTYSTLDGNGQPSQAFRTLFLQETIR-RGVLMPS-------- 380 (431)
T ss_pred --HHHHHHHHHHHHHHHHHHHHhCCCCeEEEeecceEEEEEecCCcccCCcHHHHHHHHHHHHH-CCccccc--------
Confidence 2233333344444443 34543211111222211111 00001110111145566555 5997621
Q ss_pred CCEEEEEeccCCHHHHHHHHHHHHHHHhhh
Q 011801 398 PGWFRVCFANMDDDTLQVALNRIAAFVQQD 427 (477)
Q Consensus 398 ~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~~ 427 (477)
++++. ..+++++++++++|.+++...
T Consensus 381 ---l~is~-~ht~~dId~~l~~l~~~l~~~ 406 (431)
T PRK06209 381 ---LVVSY-AHGDADIERTIDAVHGALGVY 406 (431)
T ss_pred ---ccccc-cCCHHHHHHHHHHHHHHHHHH
Confidence 46663 359999999999999999764
No 356
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.32 E-value=8e-10 Score=114.43 Aligned_cols=278 Identities=14% Similarity=0.155 Sum_probs=152.1
Q ss_pred CCcEEEeCChHHHHHHHHHHhc--------CCC------CeEEEcCCCccchHHHHhhhCCcEE-----EE------Eec
Q 011801 111 PDRIVMGGGATGANELIMFCLA--------NPG------DAFLVPSPYYAAFDRDLSWRTGVQI-----VP------VHC 165 (477)
Q Consensus 111 ~~~i~~t~G~t~al~~i~~~l~--------~~G------d~vlv~~P~y~~~~~~~~~~~g~~~-----~~------v~~ 165 (477)
-+++++++++++|++.+++... ..| .+|+...-+|++....+...+|... .+ ++.
T Consensus 110 ~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~ 189 (443)
T PRK08297 110 LPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDN 189 (443)
T ss_pred CCEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCC
Confidence 3689999999999999987651 122 5799999888876543332222110 00 110
Q ss_pred cCCCCcc--------c------CHHHHHHHHHHHHHhCCCeeEEEEeCCCCCccc-CCCHHHHHHHHHHHHhcCeEEEec
Q 011801 166 DISNNFK--------I------TREALEAAYERAQEASINIKGLIITNPSNPLGT-TLDRDTLKSLVSFINDKNIHLVCD 230 (477)
Q Consensus 166 ~~~~~f~--------i------~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~-~~~~~~l~~l~~~~~~~~~~lI~D 230 (477)
.. ..|. . +++++++.+.+ ...++.+|++.--..-.|. ..+.+.+++|.++|++||+++|.|
T Consensus 190 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~D 265 (443)
T PRK08297 190 PK-LRFPLPGEDLEEVEALEAEALAQARAAFER---HPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFD 265 (443)
T ss_pred CC-CCCCCcccccchhhHHHHHHHHHHHHHHHh---CCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe
Confidence 00 0000 0 12334444432 2346777666533334454 467888999999999999999999
Q ss_pred ccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHH----H----HhcccCCCch
Q 011801 231 EIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCG----R----KMSSFGLVSS 302 (477)
Q Consensus 231 e~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~----~----~~~~~~~vs~ 302 (477)
|++.++...+..+ .. +. .+..+| ++ +|+|.++ .| |.+.+ ++ +.... . ...+|+ .++
T Consensus 266 EV~tGfGRtG~~~-a~-~~---~gv~PD--iv--~~gK~l~-~~---a~l~~-~~-i~~~~~~~~~~~~~~~~T~~-gnp 329 (443)
T PRK08297 266 EVQTGVGLTGTAW-AY-QQ---LGVRPD--IV--AFGKKTQ-VC---GIMAG-RR-VDEVEDNVFAVSSRINSTWG-GNL 329 (443)
T ss_pred chhhccCccchHH-HH-Hh---cCCCCC--EE--Eeccccc-cc---ceecc-hH-HHHhhhhhccCccccCCCCC-ccH
Confidence 9998754433321 11 11 111334 22 6799874 21 34433 33 22111 1 112222 455
Q ss_pred HHHHHHHHhcC---ChhhHHHHHHHHHHHHHHHHHHHHHHHhhCC-Ce-EecCCceEEEEeeccchhhccCchHHHHHHH
Q 011801 303 QTQYLLASMLS---DDEFVDNFLVETSKRLAKRHHNFTKGLEQVG-IN-CLKSNAGLFFWMDLRHLLKEKTLEGEIALWR 377 (477)
Q Consensus 303 ~~q~~~~~~L~---~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~g-i~-~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~ 377 (477)
++..++.+.|+ ..++ -+...+.-++++++.+.+ .++.+ +. .... .|+++.+.++.. .....++.
T Consensus 330 l~~aaa~a~L~~l~~~~l-~~~~~~~g~~l~~~L~~l---~~~~~~~~~~vrg-~G~~~~i~~~~~------~~~~~~~~ 398 (443)
T PRK08297 330 VDMVRARRILEVIEEDGL-VENAARQGEYLLARLEEL---AAEFPAVVSNVRG-RGLMCAFDLPTT------ADRDEVIR 398 (443)
T ss_pred HHHHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHHH---HHHCCCcceeeec-cceEEEEEecCH------HHHHHHHH
Confidence 66555555554 2222 112222223333222222 22222 21 2223 467888888631 11124666
Q ss_pred HHHHhcCeEEeCCCCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHhh
Q 011801 378 TIVNDVKLNVSPGSSFQCTEPGWFRVCFAN-MDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 378 ~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~-~~~e~l~~~l~~l~~~~~~ 426 (477)
.++ ++||++.|+. ...+|++.+. ++++++++++++|.+++++
T Consensus 399 ~l~-~~Gvl~~~~~------~~~lr~~P~l~~t~~eid~~l~~l~~~l~~ 441 (443)
T PRK08297 399 RLW-EEGVLVLPCG------ERSIRFRPALTVTTEEIDAAIDALRRALPE 441 (443)
T ss_pred HHH-HCCEEEecCC------CCeEEEECCccCCHHHHHHHHHHHHHHHHh
Confidence 666 5699998752 2458887654 4999999999999999865
No 357
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.32 E-value=9.2e-10 Score=122.00 Aligned_cols=276 Identities=14% Similarity=0.123 Sum_probs=172.2
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHh-cCCC--CeEEEcCCCccchHHHHhhh---CCcEEE
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCL-ANPG--DAFLVPSPYYAAFDRDLSWR---TGVQIV 161 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l-~~~G--d~vlv~~P~y~~~~~~~~~~---~g~~~~ 161 (477)
+.+++..||++.+ .+++++-++.|+|.+.+.++.++ ..+| |+|++++-.|+.....++.+ .|++++
T Consensus 150 l~~~Qt~ia~LtG--------~~~anaSL~d~aTAaaea~~~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~ 221 (993)
T PLN02414 150 LLNYQTMITDLTG--------LPMSNASLLDEGTAAAEAMAMCNNILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVV 221 (993)
T ss_pred HHHHHHHHHHHhC--------CChhhEeecCChHHHHHHHHHHHhcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEE
Confidence 4567777888876 78999999999999999888776 3444 78999999999876554322 389998
Q ss_pred EEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCC
Q 011801 162 PVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSP 241 (477)
Q Consensus 162 ~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~ 241 (477)
.++++.. + .. +..+-++++.+| |.+|.+.+ +++|++.|+++|+++++ .+.. ..-.
T Consensus 222 ~v~~~~~-----~------~~------~~~v~~vlvq~P-~~~G~v~d---v~~I~~~ah~~GaL~iV-aad~---lal~ 276 (993)
T PLN02414 222 VADEKDF-----D------YS------SGDVCGVLVQYP-ATDGEVLD---YAEFVKNAHANGVKVVM-ATDL---LALT 276 (993)
T ss_pred Eecchhh-----c------cc------cCceEEEEEecC-CCCeEEcC---HHHHHHHHHHcCCEEEE-EECH---HHhc
Confidence 8886421 1 00 113445555555 56999988 88999999999999998 3332 1111
Q ss_pred CcccHHHhhhhccCCCCcEEEEecCCccc---CCCCceEEEEEeCCHHHHHHHH-Hhcc---------------------
Q 011801 242 KFTSVAEVIQEMDCNRDLIHIIYSLSKDM---GLPGFRVGIVYSFNDTVVNCGR-KMSS--------------------- 296 (477)
Q Consensus 242 ~~~s~~~~~~~~~~~~~~viiv~SlSK~~---g~~G~RvG~i~~~~~~i~~~~~-~~~~--------------------- 296 (477)
...+.. ..+..+++++..|.. |..|-+.|++++.++... .+. .+..
T Consensus 277 ~l~~pg--------e~GADi~vgsgqKwg~P~G~GGP~aGflavr~~~~r-~~PgriVG~s~d~~g~~~~~l~LqtReqh 347 (993)
T PLN02414 277 MLKPPG--------EWGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKR-LMPGRIIGVSVDSSGKPALRMAMQTREQH 347 (993)
T ss_pred CCCCHh--------hccCcEEEECCCccccCCCCCCCCeeEEEECHHHHh-hCCCcccCcccCCCCCcccccccccccch
Confidence 111222 225567889988886 345566999999665422 221 1100
Q ss_pred ----cCCCchHHHHHHHHhcCChh--h-HHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCC-ceEEEEeeccchhhccC
Q 011801 297 ----FGLVSSQTQYLLASMLSDDE--F-VDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSN-AGLFFWMDLRHLLKEKT 368 (477)
Q Consensus 297 ----~~~vs~~~q~~~~~~L~~~~--~-~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~-~g~~~~~~l~~~~~~~~ 368 (477)
.++.+.-+..++.+.+..-. + -..-+++..+++.+...++.++|.+.|+++..+. .+ -+.++++.
T Consensus 348 iRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~G~~~~~~~~f~-~vt~~~~~------ 420 (993)
T PLN02414 348 IRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKLGFQVQSLPFFD-TVKVKCSD------ 420 (993)
T ss_pred hhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhcCCccCCCCCcC-eEEEecCC------
Confidence 11122212222222221100 0 0112456677788888889999988887765432 12 22334331
Q ss_pred chHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccC-CHHHHHHHHHHHHH
Q 011801 369 LEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANM-DDDTLQVALNRIAA 422 (477)
Q Consensus 369 ~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~-~~e~l~~~l~~l~~ 422 (477)
..++.+++. +.||.++... .+.+|+|+... ++++++.+++.|+.
T Consensus 421 ---~~~v~~~L~-~~gI~l~~~~------~~~lrvs~~e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 421 ---ADAIADAAA-KVGINLRVVD------ANTVTVSFDETTTLEDVDKLFKVFAG 465 (993)
T ss_pred ---HHHHHHHHH-HCCCeeEEec------CCeEEEEeeccCCHHHHHHHHHHHcc
Confidence 124566665 5599886431 35699999876 89999999999974
No 358
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.32 E-value=8.3e-10 Score=122.78 Aligned_cols=276 Identities=14% Similarity=0.145 Sum_probs=172.2
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHh-cCC--CCeEEEcCCCccchHHHHhh---hCCcEEE
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCL-ANP--GDAFLVPSPYYAAFDRDLSW---RTGVQIV 161 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l-~~~--Gd~vlv~~P~y~~~~~~~~~---~~g~~~~ 161 (477)
+.++++.++++.+ .++.++-+..++|.+.+.++.++ ..+ +++|++++-.|+.....++. ..|++++
T Consensus 123 l~~~Qt~la~LtG--------~~~anaSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~ 194 (954)
T PRK05367 123 LLNFQTMVADLTG--------LEIANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVV 194 (954)
T ss_pred HHHHHHHHHHHHC--------CChhhccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEE
Confidence 4466666777765 68899999999999999888776 344 48999999999987654322 2399999
Q ss_pred EEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCC
Q 011801 162 PVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSP 241 (477)
Q Consensus 162 ~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~ 241 (477)
.++.+.+ ++ +.++.++++.+| |-+|.+.+ +++|++.|+++|+++++|..........
T Consensus 195 ~~~~~~d----~~--------------~~~~~~vlvq~p-~~~G~i~d---~~~i~~~ah~~Gal~~vda~~~Al~~l~- 251 (954)
T PRK05367 195 VGDAAKA----LD--------------HDDVFGVLLQYP-GTSGEVRD---YTALIAAAHARGALVAVAADLLALTLLT- 251 (954)
T ss_pred EecCccC----CC--------------cccEEEEEEecC-CCCeeecc---HHHHHHHHHHcCCEEEEEehhhhccCCC-
Confidence 8886431 11 115667777776 78999987 8999999999999999987553221111
Q ss_pred CcccHHHhhhhccCCCCcEEEEecCCcc---cCCCCceEEEEEeCCHHHHHHHH-Hhcc---------------------
Q 011801 242 KFTSVAEVIQEMDCNRDLIHIIYSLSKD---MGLPGFRVGIVYSFNDTVVNCGR-KMSS--------------------- 296 (477)
Q Consensus 242 ~~~s~~~~~~~~~~~~~~viiv~SlSK~---~g~~G~RvG~i~~~~~~i~~~~~-~~~~--------------------- 296 (477)
+.. ..+..++++|..|. +|+.|--.|++++.++.. ..+. .+..
T Consensus 252 ---~pg--------e~GaDi~vgs~qkfg~P~g~GGP~aGflavr~~~~-r~lpgrivG~s~d~~g~~~~~lalqtReqh 319 (954)
T PRK05367 252 ---PPG--------EMGADIAVGSAQRFGVPMGFGGPHAAYFAVRDAYK-RSMPGRIVGVSVDAAGNPALRLALQTREQH 319 (954)
T ss_pred ---Chh--------hcCCCEEEeeCcccCCCCCCCCCCEEEEEECHHHH-hhCCCCeeeeecccCCCccccccccccccc
Confidence 111 23556888999997 223344599999965432 2211 1000
Q ss_pred ----cCCCch-HHHHHHHHh--cCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchhhccCc
Q 011801 297 ----FGLVSS-QTQYLLASM--LSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTL 369 (477)
Q Consensus 297 ----~~~vs~-~~q~~~~~~--L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~~~~ 369 (477)
-++.+. ..|.+++.+ +.-.-+-..-+++..+++.....++.++|++.|+++....-.--+.++++.
T Consensus 320 iRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G~~~~~~~~f~~~~~~~~~------- 392 (954)
T PRK05367 320 IRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRALGLEVVHDSFFDTLTVEVGG------- 392 (954)
T ss_pred ccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCcccCCCCCCCeEEEeCCC-------
Confidence 011111 112221111 100000012256667778888888899998888776533210112233321
Q ss_pred hHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccC-CHHHHHHHHHHHH
Q 011801 370 EGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANM-DDDTLQVALNRIA 421 (477)
Q Consensus 370 ~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~-~~e~l~~~l~~l~ 421 (477)
...++.++++ +.||+++.- .++.+|+|+... ++++++.+++.|.
T Consensus 393 -~~~~i~~~l~-~~gi~~~~~------~~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 393 -DAAAVLARAL-AAGINLRRV------DDDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred -CHHHHHHHHH-HCCceeccc------cCCEEEEEecccCCHHHHHHHHHHHc
Confidence 1124666665 459988321 145799999876 8999999999997
No 359
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.24 E-value=2.6e-09 Score=110.51 Aligned_cols=278 Identities=14% Similarity=0.131 Sum_probs=151.3
Q ss_pred CcEEEeCChHHHHHHHHHHhcC--------------------------CC---CeEEEcCCCccchHHHHhhhCCcE---
Q 011801 112 DRIVMGGGATGANELIMFCLAN--------------------------PG---DAFLVPSPYYAAFDRDLSWRTGVQ--- 159 (477)
Q Consensus 112 ~~i~~t~G~t~al~~i~~~l~~--------------------------~G---d~vlv~~P~y~~~~~~~~~~~g~~--- 159 (477)
+++++++++++|++.+++.... +| ..|+...-+|++....+...+|..
T Consensus 123 ~~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~ 202 (464)
T TIGR00699 123 DQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIH 202 (464)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCcccc
Confidence 6899999999999999876410 11 269999999987654322221211
Q ss_pred --------EEEEeccC-CCCcc-----------cCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCC-CHHHHHHHHH
Q 011801 160 --------IVPVHCDI-SNNFK-----------ITREALEAAYERAQEASINIKGLIITNPSNPLGTTL-DRDTLKSLVS 218 (477)
Q Consensus 160 --------~~~v~~~~-~~~f~-----------i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~-~~~~l~~l~~ 218 (477)
...+|... ...+. -+++.+++++++ ...++.+|++.--..-.|.+. +.+-+++|.+
T Consensus 203 ~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~---~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~ 279 (464)
T TIGR00699 203 KLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKK---WHKPVAAIIVEPIQSEGGDNHASPDFFRKLRD 279 (464)
T ss_pred ccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHh---cCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHH
Confidence 11122110 00000 024455565543 234677777654455567766 6778999999
Q ss_pred HHHhcCeEEEecccccccccCCCCcccHHHhhhhccCC--CCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHH--HHh
Q 011801 219 FINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCN--RDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCG--RKM 294 (477)
Q Consensus 219 ~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~--~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~--~~~ 294 (477)
+|+++|+++|+||+..++...+..+. .+.. +.. +| + .+++|.+|-.| ++++. +.+.... ...
T Consensus 280 lc~~~g~lLI~DEV~tGfGrtG~~fa--~e~~---gv~~~PD--i--~t~gK~lg~gG----~~~~~-~~~~~~~~~~~~ 345 (464)
T TIGR00699 280 ITKKHNVAFIVDEVQTGVGATGKFWA--HEHW---NLDDPPD--M--VTFSKKFQTAG----YFFHD-PAFRPNKPYRQF 345 (464)
T ss_pred HHHHcCCEEEEeeeeeCCCCCcchhH--HHhc---CCCCCCC--E--EEehhhhccCC----ccccc-hhccCCCCcccc
Confidence 99999999999999987533332211 1111 111 33 2 47799996244 34442 2211100 011
Q ss_pred cccCCCchHHHHHHHHhcC---ChhhHHHHHHHHHHHHHHHHHHHHHHHhhCC--CeEe-cCCceEEEEeeccchhhccC
Q 011801 295 SSFGLVSSQTQYLLASMLS---DDEFVDNFLVETSKRLAKRHHNFTKGLEQVG--INCL-KSNAGLFFWMDLRHLLKEKT 368 (477)
Q Consensus 295 ~~~~~vs~~~q~~~~~~L~---~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~g--i~~~-~~~~g~~~~~~l~~~~~~~~ 368 (477)
..|+ .++.+..++.+.|+ +.++ -+...+.-++++++.+.+. ++++ +... ....|+++-++++..
T Consensus 346 ~T~~-gnp~~~aaa~a~L~~l~~~~l-~~~~~~~g~~l~~~L~~l~---~~~~~~i~~vRg~G~Glm~gie~~~~----- 415 (464)
T TIGR00699 346 NTWM-GDPSRALILREIIQEIKRKDL-LENVAHVGDYLYTGLEDLQ---KKYPEFIQNLRGKGRGTFIAWDTPDE----- 415 (464)
T ss_pred cCCC-CCHHHHHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHHHH---HhCCCceeeecccCeEEEEEEecCCH-----
Confidence 2222 34444444444443 3332 1222222233333222221 2233 1112 224578888887531
Q ss_pred chHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccC-CHHHHHHHHHHHHHHH
Q 011801 369 LEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANM-DDDTLQVALNRIAAFV 424 (477)
Q Consensus 369 ~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~ 424 (477)
.....+++.+++ .||++.+. +...+||..... ++++++.++++|.+++
T Consensus 416 -~~~~~i~~~~~~-~Gvl~~~~------g~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 416 -AKRDKLLKKARN-NGVNIGGC------GVKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred -HHHHHHHHHHHH-CCcEEecC------CCCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 111245555655 59999753 246799998764 9999999999998753
No 360
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=99.23 E-value=3.8e-09 Score=101.23 Aligned_cols=326 Identities=18% Similarity=0.224 Sum_probs=215.0
Q ss_pred ccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCC-----CCeEEEcCCCccchHHHHh
Q 011801 79 IAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANP-----GDAFLVPSPYYAAFDRDLS 153 (477)
Q Consensus 79 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~-----Gd~vlv~~P~y~~~~~~~~ 153 (477)
...|....+...|.+++.+.++ -+.++.|.-+.+|=.+++..+.++ |.+..+++.+|....+.-.
T Consensus 72 DEAYagsrs~~~L~~avkdifG----------fq~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~ 141 (471)
T COG3033 72 DEAYAGSRSYYALADAVKDIFG----------FQYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHI 141 (471)
T ss_pred chhhcccccHHHHHHHHHHhcC----------ceeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHH
Confidence 3468888888999999999886 245777888888888887777654 5556666677665555543
Q ss_pred hhCCcEEEEEeccCCCC--------cccCHHHHHHHHHHHHHhCCCeeEEEEeCCCC-CcccCCCHHHHHHHHHHHHhcC
Q 011801 154 WRTGVQIVPVHCDISNN--------FKITREALEAAYERAQEASINIKGLIITNPSN-PLGTTLDRDTLKSLVSFINDKN 224 (477)
Q Consensus 154 ~~~g~~~~~v~~~~~~~--------f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~N-PtG~~~~~~~l~~l~~~~~~~~ 224 (477)
...|..+.-++.++..+ ..+|++.|++.+++.-.+ ++..|+++--+| -.|+..|.+.++++.++|++|+
T Consensus 142 ~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~--nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ 219 (471)
T COG3033 142 QINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGAD--NVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYD 219 (471)
T ss_pred HhcCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcc--cCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcC
Confidence 34477776666554222 246899999999876333 456666665555 6789999999999999999999
Q ss_pred eEEEeccccccc--ccC-----CCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceE-EEEEeCCHH---HHHHHHH
Q 011801 225 IHLVCDEIYAAT--VFS-----SPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRV-GIVYSFNDT---VVNCGRK 293 (477)
Q Consensus 225 ~~lI~De~y~~~--~~~-----~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~Rv-G~i~~~~~~---i~~~~~~ 293 (477)
+.++.|.+.-.. .|- +-.-+|+.++..++---.| ..+-|.-|+- +.- + |++...++. +-..++.
T Consensus 220 ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD--~~~mS~KKD~-lvn--mGGfl~~~D~~~fDvy~~~~~ 294 (471)
T COG3033 220 IPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYAD--GCTMSAKKDG-LVN--MGGFLCFKDDSFFDVYEECRT 294 (471)
T ss_pred CcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhh--hheeeccccc-eec--cccEEEecCccHHHHHHHHHh
Confidence 999999875211 121 1124788887665310011 2344666763 221 3 566665552 3332322
Q ss_pred -------hcccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchhh-
Q 011801 294 -------MSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLK- 365 (477)
Q Consensus 294 -------~~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~- 365 (477)
+.+|+..+.-...+++.-|.+.-- ..|++.+. . ..++|.++|++.|+++..|.||--++++....+.
T Consensus 295 ~~V~~eG~~tYGgl~GrdmealAvGL~e~~~-~~yl~~Rv---~-Qv~YL~~~l~~~GVpi~~paGGHavfvda~~~lph 369 (471)
T COG3033 295 LVVVQEGFPTYGGLAGRDMEALAVGLREGVN-FDYLAHRV---A-QVQYLADGLEEAGVPIVQPAGGHAVFVDAGKFLPH 369 (471)
T ss_pred heEeeccccccCcccchhHHHHHHHHHHhcC-cHHHHHHH---H-HHHHHHHHHHhcCCeeEecCCCceEEeehhhhcCC
Confidence 245666666555666655554211 23444433 2 2378999999999999999999888888765433
Q ss_pred --ccCchHHHHHHHHHHHhcCeEEeCCCCCCCC-C----------CCEEEEEecc--CCHHHHHHHHHHHHHHHhhh
Q 011801 366 --EKTLEGEIALWRTIVNDVKLNVSPGSSFQCT-E----------PGWFRVCFAN--MDDDTLQVALNRIAAFVQQD 427 (477)
Q Consensus 366 --~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~-~----------~~~~Rl~~~~--~~~e~l~~~l~~l~~~~~~~ 427 (477)
.+.|..+ .|...|..+.||...--..|... . -..+|+.+.. .+.+.+|-.++.++++.++.
T Consensus 370 ip~eqFpaq-ala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e~~ 445 (471)
T COG3033 370 IPAEQFPAQ-ALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKENA 445 (471)
T ss_pred CChhhCcHH-HHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhHHHHHHHHHHHHHhcc
Confidence 3344444 57778888999987665555321 1 1369999955 38999999999999998763
No 361
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.22 E-value=6.7e-09 Score=100.73 Aligned_cols=358 Identities=14% Similarity=0.122 Sum_probs=195.3
Q ss_pred hhhhhhcCCC---------CCCCCCCccccccccc--cccc--cHHHHHHHHHhCCCCcccccccccccccccccCCCCC
Q 011801 21 DGWKAFDRNP---------FHPTQNPGGVIQLGLA--ENQL--CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHG 87 (477)
Q Consensus 21 ~~~~~~~~~~---------~~~~~~~~~~i~l~~~--~n~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G 87 (477)
.+|-.|+..| |..+.+...++|+-.+ .-.+ |.+.+.+.+.++-.. + .-....|... .
T Consensus 24 ~~~~~~~~~Pl~Iv~~~~~ylyDe~G~ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~--l-------~H~t~~~~~~-p 93 (442)
T KOG1404|consen 24 PGLTSYYKKPLVIVRGEGQYLYDEEGRRYLDAFGGIVTVSLGHCHPDVVAAAVKQLKK--L-------YHTTSGYLNP-P 93 (442)
T ss_pred cceeccccCCceEEecceEEEEcCCCceeehhhCCeEEEEcCCCChHHHHHHHHhhhh--h-------EEeeccccCC-c
Confidence 3466666665 3335566667776433 2222 444444444442111 0 0122345433 3
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHh--cCCCCeEEEcCCCccchHHHHhhhCCcEEEEEec
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCL--ANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHC 165 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l--~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~ 165 (477)
..+|-++++..+- -+-..+++++++++|+++++... ....-.|+--.-+|.+......-.+|......+.
T Consensus 94 i~~~Ae~L~s~~P--------~~l~~vfF~nsGsEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~ 165 (442)
T KOG1404|consen 94 IHDLAEALVSKLP--------GDLKVVFFVNSGSEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNF 165 (442)
T ss_pred HHHHHHHHHHhCC--------CCceEEEEecCCchHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccC
Confidence 5788888888764 23456999999999999988663 1222345666666665443322222332222111
Q ss_pred cC--------------CCCcccC-----H----HHHHHHHHHHHHhCC-CeeEEEEeCC-CCCcccC-CCHHHHHHHHHH
Q 011801 166 DI--------------SNNFKIT-----R----EALEAAYERAQEASI-NIKGLIITNP-SNPLGTT-LDRDTLKSLVSF 219 (477)
Q Consensus 166 ~~--------------~~~f~i~-----~----~~l~~~~~~~~~~~~-~~k~vii~nP-~NPtG~~-~~~~~l~~l~~~ 219 (477)
+. -+-|.=+ . +++++.+.. .++ .+.+ ++.-| .---|.+ +++--+++..+.
T Consensus 166 ~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~---~~~~~vAa-fiaEtIqGvgG~v~~p~GYlka~~~~ 241 (442)
T KOG1404|consen 166 PGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILY---DGPETVAA-FIAETIQGVGGIVELPPGYLKAAYKV 241 (442)
T ss_pred CCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHHHh---cCCCceeE-EEeehhccCCccccCCchHHHHHHHH
Confidence 10 0111111 2 223333322 122 3444 44444 4445654 566679999999
Q ss_pred HHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhc-ccC
Q 011801 220 INDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMS-SFG 298 (477)
Q Consensus 220 ~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~-~~~ 298 (477)
|+++|.++|.||+..++.-.+ .+++... .+.+--+-|++|.+| .|+.+|.++..++ |...+.+.. .|.
T Consensus 242 v~k~Ggl~IaDEVqtGfGRtG-~~wgfe~--------h~v~PDIvTmAKgiG-nG~Pl~AVvtt~E-Ia~v~~~~~~~fn 310 (442)
T KOG1404|consen 242 VRKRGGLFIADEVQTGFGRTG-HMWGFES--------HGVVPDIVTMAKGIG-NGFPLGAVVTTPE-IADVLNQKSSHFN 310 (442)
T ss_pred HHHcCCEEEehhhhhcccccc-ccccccc--------cCCCccHHHHHhhcc-CCCcceeeecCHH-HHHHHHhcccccc
Confidence 999999999999999865555 4444322 233333559999999 9999999999554 555444433 332
Q ss_pred C--CchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC----CCeEecCCceEEEEeeccchh-hccCc-h
Q 011801 299 L--VSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV----GINCLKSNAGLFFWMDLRHLL-KEKTL-E 370 (477)
Q Consensus 299 ~--vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~----gi~~~~~~~g~~~~~~l~~~~-~~~~~-~ 370 (477)
+ .++.+-.+..++|.--+ ++.++++. ++.-.+|.+.|.++ .+--.-..-|+++-+++-... +.... .
T Consensus 311 TyggnP~a~avg~aVL~Vik--ee~LqE~a---a~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~~~~pp~~ 385 (442)
T KOG1404|consen 311 TYGGNPVACAVGLAVLKVIK--EENLQENA---AEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKSEPKPPAT 385 (442)
T ss_pred ccCCCchhHHHHHHHHHHHH--HHhHHHHH---HHHHHHHHHHHHHHhhcCCceeecccceeEEEEEEecccCCCCCcch
Confidence 2 44555555555554322 22233322 23334444444433 221122345788877775432 11111 1
Q ss_pred HHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccC-CHHHHHHHHHHH
Q 011801 371 GEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANM-DDDTLQVALNRI 420 (477)
Q Consensus 371 ~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~-~~e~l~~~l~~l 420 (477)
.+..+......+.|++|.-|..++. .|||..... |.++++.+++..
T Consensus 386 ~~~~~i~~~cke~Gvlvg~g~i~G~----vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 386 AEGAVIGEQCKELGVLVGKGGIHGN----VFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred HHHHHHHHHHHHhCeeeecccccce----EEEecCCeeccHHHHHHHHHHH
Confidence 2223334445577999977766542 899988653 899997777755
No 362
>PLN02452 phosphoserine transaminase
Probab=99.22 E-value=4.8e-09 Score=105.58 Aligned_cols=266 Identities=17% Similarity=0.144 Sum_probs=165.9
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccc--hHHHHhhhCCcEEEEEeccCCCCc--ccCHHHHHHHHHHHHHh
Q 011801 113 RIVMGGGATGANELIMFCLANPGDAFLVPSPYYAA--FDRDLSWRTGVQIVPVHCDISNNF--KITREALEAAYERAQEA 188 (477)
Q Consensus 113 ~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~--~~~~~~~~~g~~~~~v~~~~~~~f--~i~~~~l~~~~~~~~~~ 188 (477)
-+++.+|+|.+++.+...|+.+|+++++..-.+.+ +...++.. |...+-.... .++| -+++++++.
T Consensus 73 v~~l~Gsgt~~~ea~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~-g~~~~~~~~~-~~~~~~~~~~~~~~~-------- 142 (365)
T PLN02452 73 VLFLQGGASTQFAAIPLNLCKPGDKADFVVTGSWSKKAAKEAKKY-CKTNVIASGK-DEKYTKIPSVSEWEL-------- 142 (365)
T ss_pred EEEEeCccHHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHh-CCCcEEEecC-CCCCCCCCChHHcCC--------
Confidence 46667899999999999999999988877655432 23445545 6533322211 1222 245555421
Q ss_pred CCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCc
Q 011801 189 SINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSK 268 (477)
Q Consensus 189 ~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK 268 (477)
+.+++.|.+|+....||+.++. +.++. ++.+|+|.+.+ +...+ ..+.+. + + +..|..|
T Consensus 143 ~~~~~~v~~~hnETstGv~~~~--~~~i~------~~~lvVDa~Ss---~g~~p-idv~~~--------~-v-~~~saqK 200 (365)
T PLN02452 143 TPDAKFVHICANETIHGVEFKD--YPDVG------NVPLVADMSSN---FLSKP-VDVSKY--------G-V-IYAGAQK 200 (365)
T ss_pred CCCCcEEEECCCCCCCcEecCc--ccccC------CCeEEEECCcc---ccCcc-cCHHHc--------C-E-EEEeccc
Confidence 3367888888888899996431 43332 37899999987 44443 333322 3 2 3469999
Q ss_pred ccCCCCceEEEEEeCCHHHHHHHHH-------------hcccCCCchHHHHHHHHhcCChhhHHH--HHHHHHHHHHHHH
Q 011801 269 DMGLPGFRVGIVYSFNDTVVNCGRK-------------MSSFGLVSSQTQYLLASMLSDDEFVDN--FLVETSKRLAKRH 333 (477)
Q Consensus 269 ~~g~~G~RvG~i~~~~~~i~~~~~~-------------~~~~~~vs~~~q~~~~~~L~~~~~~~~--~~~~~~~~l~~r~ 333 (477)
.+|.|| +|+++.+++.+...... .+.+++.+...-+++...|+ ++.+ -++...++.++..
T Consensus 201 ~lGP~G--l~~v~vr~~~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~---~l~~~gGl~~~~~r~~~~a 275 (365)
T PLN02452 201 NVGPSG--VTIVIIRKDLIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFE---DLLAQGGLKAMEKRNIRKA 275 (365)
T ss_pred ccCCCC--eEEEEEcHHHHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHH---HHHHccCHHHHHHHHHHHH
Confidence 999888 78888876655332111 11223344444455444443 2222 2677788888999
Q ss_pred HHHHHHHhhC-CC-eE-ecC--CceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEecc-
Q 011801 334 HNFTKGLEQV-GI-NC-LKS--NAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFAN- 407 (477)
Q Consensus 334 ~~l~~~L~~~-gi-~~-~~~--~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~- 407 (477)
+++.+.|++. |+ .. ..+ .....+.+.++.. +.+.+|.+. +++.|+...+|..- -+.+|+++=+
T Consensus 276 ~~l~~~l~~~~G~y~~~~~~~~rs~~~vsF~~~~~------~~~~~f~~~-~~~~g~~~~~G~r~----~gg~R~s~yna 344 (365)
T PLN02452 276 DLLYDAIDESNGFYVCPVEKSVRSLMNVPFTLGGS------ELEAEFVKE-AAKAGMVQLKGHRS----VGGMRASIYNA 344 (365)
T ss_pred HHHHHHHHhCCCcccCCCChHHhCCeEEEEEcCCc------hhHHHHHHH-HHHCCCcccCCccc----cCceEEECcCC
Confidence 9999999885 66 11 111 2344555666642 122245444 55679999998643 2239998844
Q ss_pred CCHHHHHHHHHHHHHHHhh
Q 011801 408 MDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 408 ~~~e~l~~~l~~l~~~~~~ 426 (477)
++.++++.+++.+++|-++
T Consensus 345 ~~~~~v~~L~~~m~~f~~~ 363 (365)
T PLN02452 345 MPLAGVEKLVAFMKDFQAK 363 (365)
T ss_pred CCHHHHHHHHHHHHHHHHh
Confidence 6999999999999999876
No 363
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.21 E-value=1.1e-08 Score=103.19 Aligned_cols=307 Identities=14% Similarity=0.108 Sum_probs=167.0
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhc-------CCCC-eEEEcCCCccchHHHHhhhCC--
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLA-------NPGD-AFLVPSPYYAAFDRDLSWRTG-- 157 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~-------~~Gd-~vlv~~P~y~~~~~~~~~~~g-- 157 (477)
.-+|-+.+++...+ -+-++|++|+|+++|++++++... +|.. +|+.-...|++-.-..-...|
T Consensus 89 a~~LA~~L~~~aP~-------~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~ 161 (449)
T COG0161 89 AIELAEKLAELAPE-------GGLDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPV 161 (449)
T ss_pred HHHHHHHHHHhCCC-------CCccEEEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCch
Confidence 34555555555421 124689999999999999987642 2332 388888888753211111111
Q ss_pred -----------cEEEEEeccC---CCCcccC-------HHHHHHHHHHHHHhC-CCeeEEEEeCC-CC-CcccCCCH-HH
Q 011801 158 -----------VQIVPVHCDI---SNNFKIT-------REALEAAYERAQEAS-INIKGLIITNP-SN-PLGTTLDR-DT 212 (477)
Q Consensus 158 -----------~~~~~v~~~~---~~~f~i~-------~~~l~~~~~~~~~~~-~~~k~vii~nP-~N-PtG~~~~~-~~ 212 (477)
..+..++... .+.+..+ .++|++.+.+ ++ .++.+ +|.-| .. -.|..+++ .-
T Consensus 162 ~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~---~g~~~IAA-fI~EPv~g~agG~~~pp~~Y 237 (449)
T COG0161 162 ALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILE---HGPETIAA-FIVEPVVGGAGGMLVPPPGY 237 (449)
T ss_pred hhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHh---cCcccEEE-EEecccccccCCcccCChHH
Confidence 1111222211 1111112 3445555443 34 35665 44456 34 47876554 46
Q ss_pred HHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHH
Q 011801 213 LKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGR 292 (477)
Q Consensus 213 l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~ 292 (477)
|+++.++|++||+++|.||+-.++.-.++.|..-. .+..+| ++ +++|.++-.=+.+|.+++.++.......
T Consensus 238 l~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~-----~gi~PD--i~--~~aKGLT~GY~Pl~a~l~~~~I~~~~~~ 308 (449)
T COG0161 238 LKRVREICDKYGILLIADEVATGFGRTGKMFACEH-----AGIVPD--IL--CLAKGLTGGYLPLSAVLTSDRIYEAFSD 308 (449)
T ss_pred HHHHHHHHHHcCcEEEeecceeCCCcCchhhhhhh-----cCCCCC--ee--eecccccccchhhHhHhhhHHHHHHHhc
Confidence 99999999999999999999988655555443321 122344 22 6789887333667777774443333333
Q ss_pred H-hcccC-----CCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhh-C-C--CeEecCCceEEEEeeccc
Q 011801 293 K-MSSFG-----LVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQ-V-G--INCLKSNAGLFFWMDLRH 362 (477)
Q Consensus 293 ~-~~~~~-----~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~-~-g--i~~~~~~~g~~~~~~l~~ 362 (477)
. ...|. +.++++-+++.+-|+ .+++ +...++.++.-.++.+.|++ + + .--.-..-|++.-+++..
T Consensus 309 ~~~~~f~HG~TYsghPlacAaAla~L~---i~e~--e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv~ 383 (449)
T COG0161 309 GDAGAFMHGHTYSGNPLACAAALANLD---ILEE--EDLLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGAIELVA 383 (449)
T ss_pred ccCCeeccCCccccCHHHHHHHHHHHH---HHHh--cCHHHHHHHHHHHHHHHHHHhcccCCcEEEeeccceEEEEEEec
Confidence 2 22222 134444444333332 2110 11223333444555566654 1 1 111123457888888875
Q ss_pred hhhccC-chH-HHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccC-CHHHHHHHHHHHHHHHhh
Q 011801 363 LLKEKT-LEG-EIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANM-DDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 363 ~~~~~~-~~~-e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~~ 426 (477)
....+. |+. -.......+.++|+.++|... .+=++.... ++++++++++++++.+++
T Consensus 384 d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~g~-------~i~~~PPliit~~eid~l~~~l~~al~~ 443 (449)
T COG0161 384 DKATKTPFEARVGARVRAAALERGLLIRPLGD-------VIYLMPPLIITREEIDELVDALREALDE 443 (449)
T ss_pred ccccccchhhhHHHHHHHHHHHCCeEEeecCC-------EEEEcCCccCCHHHHHHHHHHHHHHHHH
Confidence 443332 111 122344455567999999732 344444443 899999999999999976
No 364
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.20 E-value=1.2e-09 Score=105.59 Aligned_cols=308 Identities=17% Similarity=0.230 Sum_probs=178.4
Q ss_pred cCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEE
Q 011801 82 FQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIV 161 (477)
Q Consensus 82 Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~ 161 (477)
|+...=+.++.+.||+||+ ..+.|+.+.|-+ ++..++.|+++.||.|.+.+-........++.. .-.+.
T Consensus 135 YGt~DvHldlE~~iakF~G---------~E~aivYs~gF~-ti~S~ipafsKrGDIi~~de~~nfaIq~GlqlS-RS~i~ 203 (467)
T KOG1358|consen 135 YGTIDVHLDLEKRIAKFMG---------TEDAIVYSYGFS-TIESAIPAFSKRGDIIFVDEAVNFAIQKGLQLS-RSTIS 203 (467)
T ss_pred cccceeecccHHHHHHhhC---------Ccceeeeccccc-hhhhcchhhhccCcEEEEehhhhHHHHHHHhhh-hheeE
Confidence 6655556799999999998 356788877754 677788899999999888887766666666654 55555
Q ss_pred EEeccCCCCcccCHHHHHHHHHHH----HHhCC--Cee-EEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEeccccc
Q 011801 162 PVHCDISNNFKITREALEAAYERA----QEASI--NIK-GLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYA 234 (477)
Q Consensus 162 ~v~~~~~~~f~i~~~~l~~~~~~~----~~~~~--~~k-~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~ 234 (477)
.+.- .|.+.++..+... ++... .++ .|++.--.-++|.+.+ +.+|+++..+|...||.||.|+
T Consensus 204 ~Fkh-------ndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~p---l~~iv~lk~Kyk~RvildEs~S 273 (467)
T KOG1358|consen 204 YFKH-------NDMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICP---LPEIVKLKNKYKFRVILDESLS 273 (467)
T ss_pred EecC-------CCHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccc---cHHHHHHHhhheEEEEEecccc
Confidence 4442 1566676555321 11111 223 3344444678999999 8888888889999999999998
Q ss_pred ccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhcccCC-----CchHHHHHHH
Q 011801 235 ATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGL-----VSSQTQYLLA 309 (477)
Q Consensus 235 ~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~~~~~-----vs~~~q~~~~ 309 (477)
-.+.+... ..+.+... .+ ..+-.++++|+.-+++..| |+.++ +..+.. ..++++.+. .++....++.
T Consensus 274 fG~lg~~G-rGvteH~~-v~-~~~iDiv~~sm~~alas~G---gFc~G-~~~i~~-hQrLSg~~Y~fSAslPp~la~aa~ 345 (467)
T KOG1358|consen 274 FGVLGKTG-RGVTEHFG-VP-ITDIDIVTASMETALASGG---GFCAG-KSFIAD-HQRLSGSGYCFSASLPPYLAGAAI 345 (467)
T ss_pred cccccccC-ccccccCC-CC-ccceeeeeecccccccccC---ceeec-ceeeEe-eeeccccceeeeccCchhhhhhHH
Confidence 44333211 11111111 00 2345678899998887666 77776 333322 222222211 1122222222
Q ss_pred HhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEecCCceEEEEeeccchhhccCchHHH----HHHHHHHHhcC
Q 011801 310 SMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLKSNAGLFFWMDLRHLLKEKTLEGEI----ALWRTIVNDVK 384 (477)
Q Consensus 310 ~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~----~l~~~ll~~~g 384 (477)
..+.-.++ -.+..+.++.....+...|... ++.+..+.-...+.+.+.+.. ...+.|. +++...+.+ +
T Consensus 346 ~ai~i~~~----~p~~~~~L~~k~~~~H~~l~~~s~~~v~~~~~SPi~hl~l~~~~--~s~e~e~~lL~eivd~~i~~-~ 418 (467)
T KOG1358|consen 346 KAILIEEW----NPEIVQPLRAKVAKFHAALSSNSGFIVSGSPESPIIHLQLERSY--GSREKEEKLLEEIVDKCIAE-G 418 (467)
T ss_pred HHHHHHhh----CcchhhhhhccccccchhhhcCCceEEecCcCCceeeeeecccc--cchHHHHHHHHHHHHHHHhh-c
Confidence 22221111 1222333444444555566544 456665555556666665421 1223332 344445555 7
Q ss_pred eEEeCCCCCC----CCCCCEEEEEecc-CCHHHHHHHHHHHHHHHh
Q 011801 385 LNVSPGSSFQ----CTEPGWFRVCFAN-MDDDTLQVALNRIAAFVQ 425 (477)
Q Consensus 385 I~v~pg~~f~----~~~~~~~Rl~~~~-~~~e~l~~~l~~l~~~~~ 425 (477)
+.+.-...-. +.-+..+|||+.. +++|+++++...|++...
T Consensus 419 ~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~ik~~~~ 464 (467)
T KOG1358|consen 419 VLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAAELIKEVAS 464 (467)
T ss_pred ceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 7765433221 2224579999955 699999999999988754
No 365
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.20 E-value=7.5e-09 Score=107.02 Aligned_cols=276 Identities=13% Similarity=0.118 Sum_probs=149.4
Q ss_pred CCcEEEeCChHHHHHHHHHHhc----------C-C---CCeEEEcCCCccchHHHHhhhCCcE-EE----E--------E
Q 011801 111 PDRIVMGGGATGANELIMFCLA----------N-P---GDAFLVPSPYYAAFDRDLSWRTGVQ-IV----P--------V 163 (477)
Q Consensus 111 ~~~i~~t~G~t~al~~i~~~l~----------~-~---Gd~vlv~~P~y~~~~~~~~~~~g~~-~~----~--------v 163 (477)
.+.+++++++++|++.+++.-. + + +.+|+...-+|++....+...+|.. .. + .
T Consensus 103 ~~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~ 182 (431)
T TIGR03251 103 LPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDN 182 (431)
T ss_pred cCEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCC
Confidence 3689999999999999987642 1 1 3679999988887653332222311 00 0 1
Q ss_pred ecc--C--CCCcc-c------CHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccC-CCHHHHHHHHHHHHhcCeEEEecc
Q 011801 164 HCD--I--SNNFK-I------TREALEAAYERAQEASINIKGLIITNPSNPLGTT-LDRDTLKSLVSFINDKNIHLVCDE 231 (477)
Q Consensus 164 ~~~--~--~~~f~-i------~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~-~~~~~l~~l~~~~~~~~~~lI~De 231 (477)
|.. + ...+. + +++++++.++. ...++.+|++.--..-.|.. .+.+.+++|.++|++||+++|+||
T Consensus 183 p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DE 259 (431)
T TIGR03251 183 PKLTFPLDAPNLDQVIALEEEALRQARAAFAE---RPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDE 259 (431)
T ss_pred CcccCCccccccchhhHHHHHHHHHHHHHHHh---CCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEec
Confidence 100 0 00000 0 12333334432 23478887776445556754 577889999999999999999999
Q ss_pred cccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHH--------HhcccCCCchH
Q 011801 232 IYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGR--------KMSSFGLVSSQ 303 (477)
Q Consensus 232 ~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~--------~~~~~~~vs~~ 303 (477)
++.++...+..+ .. +. .+..+| ++ +++|.+ +. .|++.. ++ +..... ....|+ .+++
T Consensus 260 V~tG~GrtG~~~-a~-~~---~gv~PD--i~--~~gK~~--~~--~g~~~~-~~-i~~~~~~~~~~~~~~~~T~~-gnpl 323 (431)
T TIGR03251 260 VQTGVGLTGTAW-AY-QQ---LGVQPD--IV--AFGKKT--QV--CGIMAG-RR-VDEVADNVFAVPSRLNSTWG-GNLV 323 (431)
T ss_pred chhccCccchHH-HH-Hh---cCCCCC--EE--EecccC--cc--ceEEec-ch-HHHhhhhcccCccccCCCCC-CCHH
Confidence 999754433221 11 11 112334 22 578986 32 355544 32 211111 112222 4555
Q ss_pred HHHHHHHhcC---ChhhHHHHHHHHHHHHHHHHHHHHHHHhhCC-CeEecCCceEEEEeeccchhhccCchHHHHHHHHH
Q 011801 304 TQYLLASMLS---DDEFVDNFLVETSKRLAKRHHNFTKGLEQVG-INCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTI 379 (477)
Q Consensus 304 ~q~~~~~~L~---~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~g-i~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~l 379 (477)
+..++.+.|+ +.++ .+.+++..+++.+ .|.+..++.+ +.......|+++.+.++.. .....+++.+
T Consensus 324 ~~aaa~a~L~~l~~~~l-~~~~~~~g~~l~~---~L~~l~~~~~~~i~~vrg~G~~~~i~~~~~------~~~~~~~~~l 393 (431)
T TIGR03251 324 DMVRATRILEIIEEERL-VDNARVQGAHLLA---RLHELAAEFPHLVSNPRGRGLMCAFDLPST------ADRDEVIRQL 393 (431)
T ss_pred HHHHHHHHHHHHHhcCH-HHHHHHHHHHHHH---HHHHHHHhCccceecccccceeEEEEeCCH------HHHHHHHHHH
Confidence 5555555544 2222 1122222222322 2222222232 3222223467777887632 1122466666
Q ss_pred HHhcCeEEeCCCCCCCCCCCEEEEEeccC-CHHHHHHHHHHHHH
Q 011801 380 VNDVKLNVSPGSSFQCTEPGWFRVCFANM-DDDTLQVALNRIAA 422 (477)
Q Consensus 380 l~~~gI~v~pg~~f~~~~~~~~Rl~~~~~-~~e~l~~~l~~l~~ 422 (477)
+ +.||.+.|.. ...+|++.+.. +++++++++++|.+
T Consensus 394 ~-~~Gvl~~~~g------~~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 394 Y-REGVLLLGCG------ERSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred H-hCCeEEecCC------CCeEEEECCccCCHHHHHHHHHHHHh
Confidence 6 5699997742 24689888654 99999999999876
No 366
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.20 E-value=1.1e-08 Score=105.48 Aligned_cols=170 Identities=19% Similarity=0.257 Sum_probs=126.6
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccC
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDI 167 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~ 167 (477)
..+..+-.|+.++. ...-++++|++.|+..++.+++.+||.||++..++-.....+-.. |+..+.+....
T Consensus 72 i~eAqe~aA~~fgA---------d~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glila-Ga~Pvyl~p~~ 141 (557)
T COG1982 72 IKEAQELAARVFGA---------DHTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILA-GATPVYLEPSR 141 (557)
T ss_pred HHHHHHHHHHHhCC---------CceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHHHc-CCceEEecCCC
Confidence 56777777777761 236888999999999999999999999999999998887776665 98887776543
Q ss_pred CCCc----ccCHHHHHHHHHHHHHhCCCe-eEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCC
Q 011801 168 SNNF----KITREALEAAYERAQEASINI-KGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPK 242 (477)
Q Consensus 168 ~~~f----~i~~~~l~~~~~~~~~~~~~~-k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~ 242 (477)
+..| .|+.+.+++++.+.+ .. |+++++|| +=.|++++ +++|++.+...++++.+||++... ++-.+
T Consensus 142 np~~gi~ggI~~~~~~~~l~~~~----~~~k~~vitnp-TYdGv~~n---~~~i~~~~~~~~a~v~~deah~~~-~~~~~ 212 (557)
T COG1982 142 NPLYGIIGGIPLETFKEALLAHP----DAEKLAVITNP-TYDGVCYN---LRKIVELLHHYGAWVLYDEAHPAH-FDFSP 212 (557)
T ss_pred CccccccCCCCHHHHHHHHHhCh----hhheeEEEecC-ccceEeec---HHHHHHHHhhcCceEEhhhcCccc-ccccc
Confidence 3223 568999999887643 33 88999988 55799999 788888888999999999998643 33322
Q ss_pred cccHHHhhhhccCCCCcEEEEecCCcccCCCCce-EEEEEeCC
Q 011801 243 FTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFR-VGIVYSFN 284 (477)
Q Consensus 243 ~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~R-vG~i~~~~ 284 (477)
..+.... +...++++.|.+|.++ ++. ..+|...+
T Consensus 213 ~l~~~~~------~~~~~~~tqS~HK~l~--alSQaS~iHv~~ 247 (557)
T COG1982 213 MLPESAL------NGGADFVTQSTHKLLA--ALSQASMIHVKD 247 (557)
T ss_pred cCcchhh------hcCceEEEechhhhhh--hhhhhHHHhhCC
Confidence 2222111 3577889999999984 444 44555543
No 367
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.18 E-value=3.7e-08 Score=108.03 Aligned_cols=215 Identities=15% Similarity=0.141 Sum_probs=123.8
Q ss_pred CCeeEEEEeCC-CCCcccCC-CHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCC
Q 011801 190 INIKGLIITNP-SNPLGTTL-DRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLS 267 (477)
Q Consensus 190 ~~~k~vii~nP-~NPtG~~~-~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlS 267 (477)
.++.+||+.-- ..-.|.++ +.+-+++|.++|+++|+++|.||++.++.-.+..|. .+.. +..+| ++ +++
T Consensus 583 ~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa--~e~~---gv~PD--Ii--~~g 653 (817)
T PLN02974 583 GHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESA--WELL---GCKPD--IA--CYA 653 (817)
T ss_pred CCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhh--HHhc---CCCCC--EE--eec
Confidence 46777666532 46668765 677799999999999999999999998654454322 1111 22333 33 778
Q ss_pred cccCCCC-ceEEEEEeCCHHHHHHHHH--------h-cccCCCchHHHHHHHHhc---CChhhHHHHHHHHHHHHHHHH-
Q 011801 268 KDMGLPG-FRVGIVYSFNDTVVNCGRK--------M-SSFGLVSSQTQYLLASML---SDDEFVDNFLVETSKRLAKRH- 333 (477)
Q Consensus 268 K~~g~~G-~RvG~i~~~~~~i~~~~~~--------~-~~~~~vs~~~q~~~~~~L---~~~~~~~~~~~~~~~~l~~r~- 333 (477)
|.++ .| +.+|.+++.++ +.+.... . .+|+ .++++.+++.+.| ++.+..++ +.+..+++.+..
T Consensus 654 KgLt-gG~~Plaa~l~~~~-I~~~f~~~~~~~~~~hg~Ty~-gnpl~cAaala~L~~~~~~~~~~~-l~~~~~~l~~~l~ 729 (817)
T PLN02974 654 KLLT-GGLVPLAATLATEE-VFEAFRGPSKLDALLHGHSYT-AHPMGCAAAAKALQWYKDPSTNPN-LIPPGSRLRELWD 729 (817)
T ss_pred cccc-CCCCccEEEEEcHH-HHHhhccccccCCcccCCCCC-cCHHHHHHHHHHHHHHHcccHHHH-HHHHHHHHHHHHH
Confidence 9998 89 69999999555 4433321 0 1222 4555555554444 34333222 223333332221
Q ss_pred HHHHHHHhhCCCeEecCCceEEEEeeccchhhccCc--hHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEecc-CCH
Q 011801 334 HNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKEKTL--EGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFAN-MDD 410 (477)
Q Consensus 334 ~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~~~~--~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~-~~~ 410 (477)
+.+.+.|.++..-..-..-|+++-+++........+ .....+.+.++.+.||.++|.. +.+|+.... .++
T Consensus 730 ~~l~~~l~~~p~V~~VRg~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~G-------nvi~l~pP~~i~~ 802 (817)
T PLN02974 730 EELVRAISSLPNVERVVSLGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYARPLG-------NVVYLMCGPTTSP 802 (817)
T ss_pred HHHHHHHhhCCCeeEEEeeeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEecC-------CEEEEeCCCCCCH
Confidence 233334444432111123467888888642111111 1112345555536799998741 468875544 489
Q ss_pred HHHHHHHHHHHHHH
Q 011801 411 DTLQVALNRIAAFV 424 (477)
Q Consensus 411 e~l~~~l~~l~~~~ 424 (477)
+++++++++|.+.+
T Consensus 803 e~l~~~~~~l~~~~ 816 (817)
T PLN02974 803 ETCTRLLRKVYRRL 816 (817)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998765
No 368
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.12 E-value=2.3e-08 Score=106.13 Aligned_cols=199 Identities=17% Similarity=0.184 Sum_probs=139.4
Q ss_pred cCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcC----C-----------------------
Q 011801 82 FQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLAN----P----------------------- 134 (477)
Q Consensus 82 Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~----~----------------------- 134 (477)
|.-..+...+.+.+.+++.+..| +++..-.+|+|+|+|+...+.+-.+ |
T Consensus 115 ~e~SP~~t~lE~~vi~~la~l~G----~~~~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~ 190 (608)
T TIGR03811 115 YESSPATSQMEEEVGKEFATLMG----YKNGWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMP 190 (608)
T ss_pred cccCchHHHHHHHHHHHHHHHhC----CCCCCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccc
Confidence 33345678999999999999877 3344566899999999876544211 0
Q ss_pred -------------------------C------CeEEEcCCCccchHHHHhhhCCc---EEEEEeccCCCCcccCHHHHHH
Q 011801 135 -------------------------G------DAFLVPSPYYAAFDRDLSWRTGV---QIVPVHCDISNNFKITREALEA 180 (477)
Q Consensus 135 -------------------------G------d~vlv~~P~y~~~~~~~~~~~g~---~~~~v~~~~~~~f~i~~~~l~~ 180 (477)
| -+++++.-.+..+.+++... |+ .++.||+++ ++++|+++|++
T Consensus 191 ~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~il-GlG~~~vv~VpvD~--~~rmd~~~L~~ 267 (608)
T TIGR03811 191 TKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADII-GIGLDQVIPVPVDS--NYRMDINELEK 267 (608)
T ss_pred cccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHc-CCCcccEEEeecCC--CCcCCHHHHHH
Confidence 0 05788887788888888877 88 588999874 67999999999
Q ss_pred HHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCe--EEEecccccccc---cCCC--CcccH-------
Q 011801 181 AYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNI--HLVCDEIYAATV---FSSP--KFTSV------- 246 (477)
Q Consensus 181 ~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~--~lI~De~y~~~~---~~~~--~~~s~------- 246 (477)
++++..+++..+-+|+-+-.+..+|.+=+.+++.+|++.++++|+ ++.+|.+|+++. |.++ .+.+.
T Consensus 268 ~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~ 347 (608)
T TIGR03811 268 IIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVH 347 (608)
T ss_pred HHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhccc
Confidence 999877777667777888888999999896666666655578887 699999999852 2211 01111
Q ss_pred -----------------HHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHH
Q 011801 247 -----------------AEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCG 291 (477)
Q Consensus 247 -----------------~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~ 291 (477)
...+. + .....-+.-.++|.+. ....+|.++..+..+...+
T Consensus 348 ~~~~~f~~~~~~l~~~~~~~l~--g-le~ADSItvDpHK~g~-~Py~~G~ll~Rd~~~~~~~ 405 (608)
T TIGR03811 348 AEYGVFTEKKEYISREVYNAYK--A-ISEAESVTIDPHKMGY-IPYSAGGIVIQDIRMRDVI 405 (608)
T ss_pred ccccccccccccccHhHHHHHh--c-CcCceEEEeCcccccc-cCCCeEEEEEeCHHHHHHH
Confidence 11111 0 1122334558999875 7788999998887655544
No 369
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.10 E-value=4.1e-08 Score=95.17 Aligned_cols=192 Identities=19% Similarity=0.242 Sum_probs=116.7
Q ss_pred cccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEE---eCChHHHHHHHHHHhcCCCCeEEEcC-CCccchHHH
Q 011801 76 FKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVM---GGGATGANELIMFCLANPGDAFLVPS-PYYAAFDRD 151 (477)
Q Consensus 76 ~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~---t~G~t~al~~i~~~l~~~Gd~vlv~~-P~y~~~~~~ 151 (477)
|.....|+.. ..=|+.+-+.+.+.+| .+.-++ ..++|.||.++++.++.|||+++..+ .-|......
T Consensus 43 f~~tTGYGY~---D~GRd~le~iyA~vfg------aE~ALVRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~V 113 (403)
T PF06838_consen 43 FAGTTGYGYD---DIGRDKLERIYADVFG------AEDALVRPQFVSGTHAIALALFGVLRPGDELLSITGKPYDTLEEV 113 (403)
T ss_dssp CS---TT-TT----HHHHHHHHHHHHHCT-------SEEEEETTS-SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHH
T ss_pred cCCCCcCCCC---CccHHHHHHHHHHHhC------chhhhhcccccchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHH
Confidence 4444555432 2334555555544433 455555 44679999999999999999998543 346555443
Q ss_pred H----------hhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCC-CCCcccCCCHHHHHHHHHHH
Q 011801 152 L----------SWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNP-SNPLGTTLDRDTLKSLVSFI 220 (477)
Q Consensus 152 ~----------~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP-~NPtG~~~~~~~l~~l~~~~ 220 (477)
+ +.. |++...+++.++ ..+|.+.++++++. ++|+|+|--. ..-+=..++.++++++++++
T Consensus 114 IG~~g~~~GSL~e~-Gi~Y~~v~L~~d--g~~D~~~i~~~~~~------~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~v 184 (403)
T PF06838_consen 114 IGIRGNGPGSLKEF-GIKYREVPLTED--GTIDWEAIKKALKP------NTKMVLIQRSRGYSWRPSLTIEEIKEIIKFV 184 (403)
T ss_dssp HTSSSSSSSSTGGG-T-EEEE--B-TT--SSB-HHHHHHHHHT------TEEEEEEE-S-TTSSS----HHHHHHHHHHH
T ss_pred hCCCCCCCCChHHh-CceeEEEeecCC--CCcCHHHHHHhhcc------CceEEEEecCCCCCCCCCCCHHHHHHHHHHH
Confidence 3 334 789999998754 46899999999975 8999888633 34455568999999999999
Q ss_pred Hhc--CeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCce--EEEEEeCCHHHHHHHHHhcc
Q 011801 221 NDK--NIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFR--VGIVYSFNDTVVNCGRKMSS 296 (477)
Q Consensus 221 ~~~--~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~R--vG~i~~~~~~i~~~~~~~~~ 296 (477)
++. ++++++|..|.+++-..++ . .-+..++.+||-|..| .|+= -|||++..+.+..+..++..
T Consensus 185 k~~~p~~iifVDNCYGEFvE~~EP--~----------~vGADl~aGSLIKNpG-GgiAptGGYIaGr~~lVe~~a~RLTa 251 (403)
T PF06838_consen 185 KEINPDVIIFVDNCYGEFVETQEP--T----------EVGADLMAGSLIKNPG-GGIAPTGGYIAGRKDLVERAAYRLTA 251 (403)
T ss_dssp HHH-TTSEEEEE-TTTTTTSSS-G--G----------GGT-SEEEEETTSGGG-TTT-SS-EEEEESHHHHHHHHHHHS-
T ss_pred HhhCCCeEEEEeCCcceeccccCc--c----------ccchhheeccceeCCC-CCccCcCCEEechHHHHHHHHhhhcC
Confidence 864 7899999999985333222 1 1244588999999987 5532 59999988777777777766
Q ss_pred cC
Q 011801 297 FG 298 (477)
Q Consensus 297 ~~ 298 (477)
.+
T Consensus 252 PG 253 (403)
T PF06838_consen 252 PG 253 (403)
T ss_dssp TT
T ss_pred Cc
Confidence 55
No 370
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.04 E-value=1.5e-08 Score=101.50 Aligned_cols=250 Identities=14% Similarity=0.052 Sum_probs=136.8
Q ss_pred CCCCccccccccc--cccc--cHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCcc
Q 011801 34 TQNPGGVIQLGLA--ENQL--CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTF 109 (477)
Q Consensus 34 ~~~~~~~i~l~~~--~n~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~ 109 (477)
+.+.+.+||+..+ .+.+ ..+.+.+.+++.. .............+.+.++++.+.+..+ -
T Consensus 12 d~dG~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~-------------~~~~~~~~~~~~~~~~~~la~~L~~~~p----~ 74 (339)
T PF00202_consen 12 DVDGREYLDFMSGYGSVNLGHNHPEIAEAIAEQA-------------NKLNYVSFSGFTHPEAAELAEKLAELFP----G 74 (339)
T ss_dssp ETTSEEEEESSHHHHTTTT-BT-HHHHHHHHHHH-------------HHCSSCSTTTSEEHHHHHHHHHHHHHSS----T
T ss_pred ECCCCEEEECCCCccceecCCCccccchhHHHHh-------------hhcccccccceeccchhhhhhhhhhccc----c
Confidence 3445668888543 3444 3456666665531 1111211122334666677777765542 1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhc-------C-CCCeEEEcCCCccchHHHHhhhC------------CcEEEEEeccCCC
Q 011801 110 DPDRIVMGGGATGANELIMFCLA-------N-PGDAFLVPSPYYAAFDRDLSWRT------------GVQIVPVHCDISN 169 (477)
Q Consensus 110 ~~~~i~~t~G~t~al~~i~~~l~-------~-~Gd~vlv~~P~y~~~~~~~~~~~------------g~~~~~v~~~~~~ 169 (477)
..+++++++++++|++.+++... . .-..|+...-+|++........+ ...+..+|.+...
T Consensus 75 ~~~~v~f~~sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~ 154 (339)
T PF00202_consen 75 GLDRVFFANSGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPA 154 (339)
T ss_dssp TEEEEEEESSHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHH
T ss_pred ccceeeeccCchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccc
Confidence 35689999999999999997654 1 23688888888886432111110 1233455543211
Q ss_pred C---cccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCccc-CCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCccc
Q 011801 170 N---FKITREALEAAYERAQEASINIKGLIITNPSNPLGT-TLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTS 245 (477)
Q Consensus 170 ~---f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~-~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s 245 (477)
. ..-..+++++.+.+.. ..++.+|++.--..-.|. ..+.+-+++|.++|+++|+++|+||++.++.-.++.+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~--~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~ 232 (339)
T PF00202_consen 155 ADEEEQACLNALEELIAALN--ADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFAS 232 (339)
T ss_dssp HHHHHHHHHHHHHHHHHHHH--GGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGH
T ss_pred hhhhHHHHHHHHHHHHHhhc--CCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCccce
Confidence 0 0001222333333222 336766666533334565 456778999999999999999999999987555554322
Q ss_pred HHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHH--hcccCCCchHHHHHHHHhcC
Q 011801 246 VAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRK--MSSFGLVSSQTQYLLASMLS 313 (477)
Q Consensus 246 ~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~--~~~~~~vs~~~q~~~~~~L~ 313 (477)
.. . +..+| ++ +++|.++ .|+.+|.+++.++ +.+.+.. ..+-...++++..++.+.|+
T Consensus 233 -~~-~---gv~PD--iv--~~gK~l~-gG~p~sav~~~~~-i~~~~~~~~~~~T~~g~p~~~aaa~~~l~ 291 (339)
T PF00202_consen 233 -EH-Y---GVDPD--IV--TFGKGLG-GGLPISAVLGSEE-IMEAFQPGSHGSTFGGNPLSCAAALATLE 291 (339)
T ss_dssp -HH-H---TSSSS--EE--EEEGGGG-TTSSEEEEEEEHH-HHTTSCTTSSTCTTTT-HHHHHHHHHHHH
T ss_pred -ec-c---cccCc--cc--ccccchh-hhhhcccccccch-hhccccccccccccccchHhhhhhhhHHH
Confidence 21 1 12344 33 4569998 8899999999554 4333321 11112245555555555554
No 371
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.01 E-value=1.4e-07 Score=92.30 Aligned_cols=299 Identities=18% Similarity=0.182 Sum_probs=164.2
Q ss_pred HHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcC------CCC--eEEEcCCCccchHHHHhhhCCcEE
Q 011801 89 PEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLAN------PGD--AFLVPSPYYAAFDRDLSWRTGVQI 160 (477)
Q Consensus 89 ~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~------~Gd--~vlv~~P~y~~~~~~~~~~~g~~~ 160 (477)
-++.+.+.+..++ ..+++|++.+++|+|++.++..-.+ +-+ .|+...-+|++-.-.+-..++..-
T Consensus 101 v~l~~~l~~~~~~-------~~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~ 173 (433)
T KOG1401|consen 101 VELEEVLSAVLGK-------GSAERVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSK 173 (433)
T ss_pred HHHHHHHHhcccC-------CCccEEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccc
Confidence 4444555554432 3688999999999999999866321 112 488777777764322211112222
Q ss_pred EEEeccC---C---CCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccC-CCHHHHHHHHHHHHhcCeEEEecccc
Q 011801 161 VPVHCDI---S---NNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTT-LDRDTLKSLVSFINDKNIHLVCDEIY 233 (477)
Q Consensus 161 ~~v~~~~---~---~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~-~~~~~l~~l~~~~~~~~~~lI~De~y 233 (477)
...+.++ + ..++ |..++++.++.+ ...+.+||+.--.--.|.. .+++-+..|.+.|+++++++|.||+.
T Consensus 174 y~~~~~p~~p~v~~~~yn-d~t~l~k~~~~h---~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~ 249 (433)
T KOG1401|consen 174 YGLPFDPIAPDVVTAEYN-DSTALEKLFESH---KGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQ 249 (433)
T ss_pred cCCCCCCCCCceeecccC-CHHHHHHHHHhC---CCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhh
Confidence 2221110 0 0111 588888888764 3357787776445566654 57778999999999999999999999
Q ss_pred cccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhcc------cCCCchHHHHH
Q 011801 234 AATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSS------FGLVSSQTQYL 307 (477)
Q Consensus 234 ~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~~------~~~vs~~~q~~ 307 (477)
-++.-.+. .-..+++. +.+| +.++.|.+| .|+.+|..++ ++.|.+....-.. |+ .++++-.+
T Consensus 250 tG~gR~g~--~~a~e~~~---~~PD----I~t~aK~L~-gGlPigA~~v-~~kV~~~i~~~~~l~hg~Tf~-gnpLacsa 317 (433)
T KOG1401|consen 250 TGLGRLGY--GWAQEYFG---VTPD----ITTVAKPLG-GGLPIGATGV-RDKVAEMISPGDHLYHGGTFS-GNPLACSA 317 (433)
T ss_pred hCccccch--HHHHHHhC---cCCc----ceeehhhcc-CCceeEEEee-hHHHHhhcCCCCccccCcccC-CChhhhhH
Confidence 87544333 22223322 2334 347889999 9999999999 4445554432222 22 34444444
Q ss_pred HH---HhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCC--CeEecCCceEEEEeeccchhh----ccCchHH--HHHH
Q 011801 308 LA---SMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVG--INCLKSNAGLFFWMDLRHLLK----EKTLEGE--IALW 376 (477)
Q Consensus 308 ~~---~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~g--i~~~~~~~g~~~~~~l~~~~~----~~~~~~e--~~l~ 376 (477)
+. ..|.++++ +++..+.-+..++.+.+.+.+.. +.-. -..|+++.+.+...+. ......+ ..++
T Consensus 318 ~~~~l~~l~~~e~----~k~vs~~~k~L~~~l~e~~~~~~~~i~g~-~grgl~ig~~~~~p~~~~~d~~~~~~ll~~~~~ 392 (433)
T KOG1401|consen 318 GIKVLDELKDPET----LKNVSKIGKELRKLLDEYLKKTPNSICGG-VGRGLVIGFEFEGPVYKFADAAREQGLLILTLG 392 (433)
T ss_pred HHHHHHHHcCHHH----HHHHHHHHHHHHHHHHHHhccCCCceeee-eeeEEEEEEEEeechhhhhhhhhhhhHHHHHHh
Confidence 33 34456665 33333333444455666665542 2221 2334555443332211 1111111 0112
Q ss_pred HHHHHhcCeEEeCCCCCCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhhh
Q 011801 377 RTIVNDVKLNVSPGSSFQCTEPGWFRVCFANMDDDTLQVALNRIAAFVQQD 427 (477)
Q Consensus 377 ~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~~~e~l~~~l~~l~~~~~~~ 427 (477)
+.+++ .|+.+.|- + =+++.. ++|.++++++.+.+.+.+.
T Consensus 393 ~~~~~-~gv~i~P~---------~-~l~~~~-~~E~i~~~l~i~~~~l~~~ 431 (433)
T KOG1401|consen 393 KGLLE-EGVRIAPI---------Y-LLTVEH-TPEVIQRLLTILEKVLSAL 431 (433)
T ss_pred ccccc-ceEEEecc---------c-cccccC-cHHHHHHHHHHHHHHHHHh
Confidence 22222 25555540 0 123332 5889999999998887653
No 372
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=98.96 E-value=2.9e-07 Score=92.02 Aligned_cols=328 Identities=12% Similarity=0.091 Sum_probs=181.3
Q ss_pred cccccccccccHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHH---HHHHHhcccCCCCccCCCcEEEe
Q 011801 41 IQLGLAENQLCFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQA---VAKFMGKGRGGRVTFDPDRIVMG 117 (477)
Q Consensus 41 i~l~~~~n~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~a---ia~~~~~~~g~~~~~~~~~i~~t 117 (477)
++|+-+...+|.+.+++.-++..+ ....|++.+ ++ .|-.+++.+. +.+.+++.++ ++-+.+=+++.
T Consensus 6 ~nF~aGPa~lp~~Vl~~~~~~~~~---~~~~g~si~-ei-----sHRs~~F~~i~~~~~~~Lr~Ll~--~P~~y~Vlfl~ 74 (364)
T PRK12462 6 LNFSGGPGALPDTVLEQVRQAVVE---LPETGLSVL-GM-----SHRSSWFSSLLAQAEADLRDLLG--IPDEYGVVFLQ 74 (364)
T ss_pred ceecCCCcCCCHHHHHHHHHHHhc---ccccCcccc-cc-----ccccHHHHHHHHHHHHHHHHHhC--CCCCCeEEEEe
Confidence 567767666776666655433211 001122111 11 2222333333 3334444443 21122235557
Q ss_pred CChHHHHHHHHHHhcCCCCeEE--EcCCCccc-hHHHHhhhCCcEEEEEeccCCCCc--ccCHHHHHHHHHHHHHhCCCe
Q 011801 118 GGATGANELIMFCLANPGDAFL--VPSPYYAA-FDRDLSWRTGVQIVPVHCDISNNF--KITREALEAAYERAQEASINI 192 (477)
Q Consensus 118 ~G~t~al~~i~~~l~~~Gd~vl--v~~P~y~~-~~~~~~~~~g~~~~~v~~~~~~~f--~i~~~~l~~~~~~~~~~~~~~ 192 (477)
+|+|.+++.+...|+.+||+++ +.+-.|.. +...++.. | ++..+......+| -+++++++ .+.+.
T Consensus 75 GggT~~~ea~~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~-g-~v~~~~~~~~~~~~~~p~~~~~~--------~~~d~ 144 (364)
T PRK12462 75 GGSSLQFSMIPMNFSRPGAAAPEYVTTGYWSRKAIGEASRV-A-AMRVVWDGAASGYRTLPSLAELD--------WDARA 144 (364)
T ss_pred ccHHHHHHHHHHHcCCCCCcEEEEEeCCHHHHHHHHHHHhc-C-CceEecCcCCCCCCcCCCHHHhc--------cCCCC
Confidence 7799999999999999999655 44444543 23334444 5 3333321111222 23444431 12257
Q ss_pred eEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCC
Q 011801 193 KGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGL 272 (477)
Q Consensus 193 k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~ 272 (477)
+.|.+|.-...||+.++ ++...++.++|+|-+-+ +...+ ..+.. . .++..+.-|.+|.
T Consensus 145 ~~v~~t~NETstGv~~~--------~~~~~~~~llvvD~sS~---~~s~p-id~~~--------~--dvi~agsQKnlgP 202 (364)
T PRK12462 145 PFRHYVSNETVEGLQFP--------DAAGLPDSPLIADMSSD---FMSRP-FDVEA--------Y--GMVYAHAQKNLGP 202 (364)
T ss_pred cEEEEccCCCCceEecC--------cccccCCCeEEEEcCch---hhCCC-CChHH--------c--cEEEeeccccCCC
Confidence 78888877779999986 22223688999999887 44433 33222 2 3566788999997
Q ss_pred CCceEEEEEeCCHHHHHHHH-------------HhcccCCCchHHHHHHHHhcCChhhHHH--HHHHHHHHHHHHHHHHH
Q 011801 273 PGFRVGIVYSFNDTVVNCGR-------------KMSSFGLVSSQTQYLLASMLSDDEFVDN--FLVETSKRLAKRHHNFT 337 (477)
Q Consensus 273 ~G~RvG~i~~~~~~i~~~~~-------------~~~~~~~vs~~~q~~~~~~L~~~~~~~~--~~~~~~~~l~~r~~~l~ 337 (477)
|| ++.++.+++.+....+ +.+.+.+.+...-+++...|+--. ++ -++...++.++..+.+.
T Consensus 203 ~G--ltvvivs~~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~--~e~GGl~~~~~r~~~ka~~ly 278 (364)
T PRK12462 203 AG--VTVAIIRRALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIR--DEIGGVHAMRDINARKAAMLY 278 (364)
T ss_pred Cc--eEEEEECHHHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHH--HhccCHHHHHHHHHHHHHHHH
Confidence 77 6777776665533211 112233444455555444432110 11 25566677778888888
Q ss_pred HHHhhCC-CeEec----CCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEecc-CCHH
Q 011801 338 KGLEQVG-INCLK----SNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFAN-MDDD 411 (477)
Q Consensus 338 ~~L~~~g-i~~~~----~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~-~~~e 411 (477)
+.+++.. +.... ..+-+-+.++++.. +-+.+|.+. +++.|+.-.-|.. .-|.+|+++=+ ++.|
T Consensus 279 ~~id~~~~~~~~~~~~~~RS~mnv~f~~~~~------~l~~~f~~~-a~~~gl~~lkGhr----~vgg~Ras~yna~~~e 347 (364)
T PRK12462 279 ATLDALNEVIDCHAHRAARSTMNVAFRFRQP------RLDTLFKEQ-STEAGFCGLSGHR----SIGGIRASLYNAVSEQ 347 (364)
T ss_pred HHHHhCCCcccCCCChhhcCcceEEEEcCCH------HHHHHHHHH-HHHCCCccccCCc----ccCceEEEcCCCCCHH
Confidence 8888774 32221 11223344454421 123344444 4566998766632 24569999855 5999
Q ss_pred HHHHHHHHHHHHHhh
Q 011801 412 TLQVALNRIAAFVQQ 426 (477)
Q Consensus 412 ~l~~~l~~l~~~~~~ 426 (477)
.++.+++-+++|-++
T Consensus 348 ~v~~L~~fm~~f~~~ 362 (364)
T PRK12462 348 AVSRLCAFLKDFAIR 362 (364)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998765
No 373
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.94 E-value=4.2e-07 Score=89.62 Aligned_cols=317 Identities=18% Similarity=0.282 Sum_probs=187.2
Q ss_pred cccccccCCC---CCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHH--HHH-hcCCC----CeEEEcCCCc
Q 011801 76 FKDIAIFQDY---HGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELI--MFC-LANPG----DAFLVPSPYY 145 (477)
Q Consensus 76 ~~~~~~Y~~~---~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i--~~~-l~~~G----d~vlv~~P~y 145 (477)
|..+.-|+|. +|+.++...+.+|+.+..| +|.-.+-.-+|+++=..-+ ++. .-..| +.+|+|+-.+
T Consensus 92 f~~iHP~~pe~~vqG~l~li~~Lq~~L~~ITG----~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAH 167 (496)
T COG1003 92 FANIHPFQPEEQVQGYLELIYELQEWLKEITG----MDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAH 167 (496)
T ss_pred hhhcCCCCChHHHHHHHHHHHHHHHHHHHhcC----CceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeecccc
Confidence 5556667663 5888999999999998877 3433344456666543322 222 23344 5899999988
Q ss_pred cchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCe
Q 011801 146 AAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNI 225 (477)
Q Consensus 146 ~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~ 225 (477)
...-..+... |.+++.|+|+.++ .+|+++|+++..+ ++.++.+||| |-.|.. .+.+++|+++.+++|.
T Consensus 168 GTNPASAam~-G~~VV~V~~~~~G--~VDlddLk~k~~~------~~AalMiTnP-sT~GvF--E~~I~ei~~ivH~~Gg 235 (496)
T COG1003 168 GTNPASAAMA-GFKVVVVKCDENG--NVDLDDLRAKAED------NLAALMITNP-STLGVF--EEDIREICEIVHEAGG 235 (496)
T ss_pred CCChhhHhhc-CceEEEEecCCCC--CccHHHHHHHhcc------ceeEEEeccC-cccccc--hhhHHHHHHHHHHcCC
Confidence 7666666665 9999999998644 6999999998874 8999999999 456665 6779999999999999
Q ss_pred EEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCC----CceEEEEEeCCHHHHHHHH---------
Q 011801 226 HLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLP----GFRVGIVYSFNDTVVNCGR--------- 292 (477)
Q Consensus 226 ~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~----G~RvG~i~~~~~~i~~~~~--------- 292 (477)
.|..|.+-..-..+-...- ++ ..|.+|. -++|+|..| |-.+|=|... ..+..++-
T Consensus 236 ~vY~DGANlNA~vG~~rPG-------d~--G~DV~Hl--NLHKTF~iPHGGGGPG~GPvgVk-~~L~pfLP~p~~~~~~~ 303 (496)
T COG1003 236 QVYYDGANLNAIVGLARPG-------DM--GFDVVHL--NLHKTFCIPHGGGGPGAGPVGVK-AHLAPFLPGPVVYHDVG 303 (496)
T ss_pred EEEecCcchhhhhcccccc-------cc--ccceEEe--ecccccccCCCCCCCCCCceehH-hhccccCCCCcccCCCc
Confidence 9999988754323221100 00 2243443 667777433 2334444331 11111110
Q ss_pred -------------Hh-cccCCCchH-HHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEecC--CceE
Q 011801 293 -------------KM-SSFGLVSSQ-TQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLKS--NAGL 354 (477)
Q Consensus 293 -------------~~-~~~~~vs~~-~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~~--~~g~ 354 (477)
+. ..|++.+.+ -.++=..++.... +++..+.---+..++.+.|+.. .+.+.+. -..
T Consensus 304 ~y~~~~~~~~s~g~~~a~~Gs~~il~~a~~YI~~mG~~G-----L~~ase~AvLNANYia~rL~~~y~~~y~~~~~~~H- 377 (496)
T COG1003 304 EYRLDYDGKKSIGVSAAPYGSASILPIAWAYIRMMGADG-----LKQASEVAVLNANYIARRLKGYYPVPYTGENRVAH- 377 (496)
T ss_pred cccccCCCCccceeeccccCcchHHHHHHHHHHHHhHHH-----HHHHHHHHHHhHHHHHHHhhhcCccccCCCCccee-
Confidence 01 122322221 1122223333332 2333333344567888888863 3332222 121
Q ss_pred EEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccC-CHHHHHHHHHHHHHHHhhhhc
Q 011801 355 FFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANM-DDDTLQVALNRIAAFVQQDKE 429 (477)
Q Consensus 355 ~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~~~~~ 429 (477)
=+.++.+...+...+ ...++.++|++ +|+.- |--+|...-++.+=|=.... +.+++|++++++.++.++.+.
T Consensus 378 E~ild~r~l~~~~Gv-~~~DvAKrLlD-~GfHa-PT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea~~ 450 (496)
T COG1003 378 ECILDARPLKKETGV-RALDVAKRLLD-YGFHA-PTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIREEADA 450 (496)
T ss_pred EEEeechHhHhhcCC-cHHHHHHHHHh-cCCCC-CcccCccccccceeecCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 234566654443333 34478888885 58764 55555433345454444332 678999999999998876554
No 374
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.90 E-value=6.4e-07 Score=87.95 Aligned_cols=312 Identities=15% Similarity=0.164 Sum_probs=179.1
Q ss_pred HHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhc--CC-----C-----CeEEEc-CCCccchHHHHhhhC
Q 011801 90 EFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLA--NP-----G-----DAFLVP-SPYYAAFDRDLSWRT 156 (477)
Q Consensus 90 ~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~--~~-----G-----d~vlv~-~P~y~~~~~~~~~~~ 156 (477)
-..+.+-..+.+..|+.. ..|.|+--+|+..-+..+..+-. -| | +-|+.. +-++..+..++.+.
T Consensus 141 lmE~~vl~km~~ivGw~~--~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~l- 217 (510)
T KOG0629|consen 141 LMEEEVLAKMREIVGWEE--GGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFL- 217 (510)
T ss_pred eehHHHHHHHHHHhCCCC--CCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHh-
Confidence 344555555666656332 24666665566555555443321 12 2 334433 44555677777776
Q ss_pred C---cEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccc
Q 011801 157 G---VQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIY 233 (477)
Q Consensus 157 g---~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y 233 (477)
| -.++.|++++. .++++++||+.+..+++.|..+-.|-.+.-+.-.|..=+ |..|+++|++|++|+.+|.+|
T Consensus 218 g~gtd~c~~v~t~e~--Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDd---L~~iadiC~k~~lWmHvDAAw 292 (510)
T KOG0629|consen 218 GLGTDHCIKVKTDER--GKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDD---LNGIADICEKHKLWMHVDAAW 292 (510)
T ss_pred ccCCceeEEeccccc--CccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCc---HHHHHHHHHhcCEEEEeeccc
Confidence 7 56788888764 479999999999887666554443333333456666655 999999999999999999999
Q ss_pred cccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhc-------------ccC--
Q 011801 234 AATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMS-------------SFG-- 298 (477)
Q Consensus 234 ~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~-------------~~~-- 298 (477)
.+....+.........++ ..+ -+..+.+|.+| +.+.++.++...+.+......+. +|-
T Consensus 293 GGglLmS~k~R~kl~Gie----ra~--SvtwnpHK~~g-aplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTg 365 (510)
T KOG0629|consen 293 GGGLLMSRKHRHKLTGIE----RAN--SVTWNPHKLMG-APLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTG 365 (510)
T ss_pred ccccccChhhHhhccCcc----ccC--ceeecHHHhhc-CcchhhHHHHHHHHHHHhhcccchhhhhccCceeecccccc
Confidence 885444433222222222 112 34568899999 77888887776655444333321 111
Q ss_pred --------CCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCC-eE-e--cCCceEEEEeeccchhhc
Q 011801 299 --------LVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGI-NC-L--KSNAGLFFWMDLRHLLKE 366 (477)
Q Consensus 299 --------~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi-~~-~--~~~~g~~~~~~l~~~~~~ 366 (477)
.+..+-.+..-..-....| ++..+++-+..+++.+.+++.+. .. . .|+.-++++-..|+.++.
T Consensus 366 dK~iQCGRh~D~FKlWlmwkaKG~~Gf-----e~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw~vp~~lR~ 440 (510)
T KOG0629|consen 366 DKAIQCGRHVDVFKLWLMWKAKGTQGF-----EAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVCFWYVPPSLRG 440 (510)
T ss_pred cchhhcCccccHHHHHHHHHhcccccH-----HHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEEEeeccCchHhcc
Confidence 1112222222222223333 44455666778999999998743 22 2 245345554445544432
Q ss_pred cC--chHHHHH-------HHHHHHhcCeEEeCCCCCCC--CCCCEEEEEeccC--CHHHHHHHHHHHHHHHh
Q 011801 367 KT--LEGEIAL-------WRTIVNDVKLNVSPGSSFQC--TEPGWFRVCFANM--DDDTLQVALNRIAAFVQ 425 (477)
Q Consensus 367 ~~--~~~e~~l-------~~~ll~~~gI~v~pg~~f~~--~~~~~~Rl~~~~~--~~e~l~~~l~~l~~~~~ 425 (477)
.. .+.+.++ -..++++ |.... .|.+ ..+.+||+.+++. +.++++-+++.|..+-+
T Consensus 441 ~~~~~e~~~rL~kVaPkIK~~Mm~~-Gt~Mi---~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerlgq 508 (510)
T KOG0629|consen 441 WQENPERDSRLVKVAPKIKERMMKK-GTTMI---GYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERLGQ 508 (510)
T ss_pred CcccchhhhHHHhhCcHHHHHHHhc-cceee---EecccccccchhheecccchhhhhhHHHHHHHHHHhcc
Confidence 22 1111111 1233333 44332 1332 3467999999875 88999999998877543
No 375
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=98.87 E-value=2.2e-07 Score=87.13 Aligned_cols=292 Identities=13% Similarity=0.190 Sum_probs=166.3
Q ss_pred CcEEEeCChHHHHHHHHHH---hcCCCCeEEEcCCCccchHH-HHhhh-----CC--c---EEEEE-eccC--CCCccc-
Q 011801 112 DRIVMGGGATGANELIMFC---LANPGDAFLVPSPYYAAFDR-DLSWR-----TG--V---QIVPV-HCDI--SNNFKI- 173 (477)
Q Consensus 112 ~~i~~t~G~t~al~~i~~~---l~~~Gd~vlv~~P~y~~~~~-~~~~~-----~g--~---~~~~v-~~~~--~~~f~i- 173 (477)
+-+++++++++|+.++++. +.+..|.|.+. ..|.+... ..+.. -| + +.+.| ||+. .+.|+.
T Consensus 103 svc~F~NSGSEANDLALRLAR~ftkhqDvItld-HAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~ 181 (452)
T KOG1403|consen 103 SVCFFVNSGSEANDLALRLARNFTKHQDVITLD-HAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDK 181 (452)
T ss_pred eEEEEecCCchhhHHHHHHHHhhcccCceEEEe-chhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccc
Confidence 4678899999999999876 45666755554 45544322 11111 01 1 11111 2211 112221
Q ss_pred ----------CHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHH-HHHHHHHHHHhcCeEEEecccccccccCCCC
Q 011801 174 ----------TREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRD-TLKSLVSFINDKNIHLVCDEIYAATVFSSPK 242 (477)
Q Consensus 174 ----------~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~-~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~ 242 (477)
-.+.+++.+++....+.++.+.+-.+-..=.|.++++. -.+++++..+.+|.+.|.||+..++.--+..
T Consensus 182 ~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~h 261 (452)
T KOG1403|consen 182 MYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSH 261 (452)
T ss_pred cCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchh
Confidence 24567777777666666666544444445567777665 5899999999999999999999986555666
Q ss_pred cccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHH-----hcccCCCchHHHHHHHHh---cCC
Q 011801 243 FTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRK-----MSSFGLVSSQTQYLLASM---LSD 314 (477)
Q Consensus 243 ~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~-----~~~~~~vs~~~q~~~~~~---L~~ 314 (477)
+++.... +-+--+-++.|.+| .|..++.++..+ .+.+++.. +..|+ .++.+-++..+. +++
T Consensus 262 yWafq~y--------~fiPDIVtmgKpmG-NGhPVa~Vattk-eIA~Af~atgv~YFNTyG-GnPVsCAv~laVm~v~e~ 330 (452)
T KOG1403|consen 262 YWAFQTY--------NFIPDIVTMGKPMG-NGHPVAAVATTK-EIAQAFHATGVEYFNTYG-GNPVSCAVGLAVMRVCED 330 (452)
T ss_pred hhhhhhh--------ccccchheecccCC-CCCeeeEEeccH-HHHHHhccccceehhccC-CCchhHHHHHHHHHHHhh
Confidence 6665433 22222348899999 999999999844 45554432 23444 455544444444 444
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEe--cCCceEEEEeeccchhhccCchHHH--HHHHHHHHhcCeEEeCC
Q 011801 315 DEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCL--KSNAGLFFWMDLRHLLKEKTLEGEI--ALWRTIVNDVKLNVSPG 390 (477)
Q Consensus 315 ~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~--~~~~g~~~~~~l~~~~~~~~~~~e~--~l~~~ll~~~gI~v~pg 390 (477)
++ +++..++.-+....+...+++- -++. ....|+|+-++|-..-...+.+.+. -+..++-+.++|+++.-
T Consensus 331 E~-----Lq~ha~~vG~~L~~lL~~~k~k-h~~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaD 404 (452)
T KOG1403|consen 331 EN-----LQEHAQQVGEKLEVLLRRLKQK-HECIGDVRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSAD 404 (452)
T ss_pred hh-----HHHHHHHHHHHHHHHHHHHhhh-ccceeccccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecC
Confidence 43 3333444443333333333321 1222 2356899999997644444433332 33455667778888632
Q ss_pred CCCCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHh
Q 011801 391 SSFQCTEPGWFRVCFAN-MDDDTLQVALNRIAAFVQ 425 (477)
Q Consensus 391 ~~f~~~~~~~~Rl~~~~-~~~e~l~~~l~~l~~~~~ 425 (477)
. ...+-+.+-... .++++.++.+..|.+++.
T Consensus 405 G----Ph~NilKiKPPmCFneena~e~v~~ld~iLT 436 (452)
T KOG1403|consen 405 G----PHRNILKIKPPMCFNEENADEFVLGLDEILT 436 (452)
T ss_pred C----CCCceeecCCCcccChhhHHHHHHHHHHHHH
Confidence 1 112233332211 257778888888777764
No 376
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.84 E-value=1e-06 Score=83.82 Aligned_cols=320 Identities=20% Similarity=0.247 Sum_probs=180.2
Q ss_pred ccccc-cHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHH
Q 011801 46 AENQL-CFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGAN 124 (477)
Q Consensus 46 ~~n~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al 124 (477)
+.|+- |.+.|.+.+.+..+...+ ..-+.|.+- +.++.+-++++++ -+.++-++.+.||.
T Consensus 70 aVnqGhchpki~~aLqeq~~kLtl--------ssrafYnd~--~~~f~~~vt~lf~----------~~kvlpmnTGaEa~ 129 (427)
T KOG1402|consen 70 AVNQGHCHPKIIKALQEQADKLTL--------SSRAFYNDV--LGEFAEYVTKLFG----------YDKVLPMNTGAEAV 129 (427)
T ss_pred hcccCCCCHHHHHHHHHHHhHhhh--------hhHHHhhhh--HHHHHHHHHHhcC----------cceeeecccchhHH
Confidence 44554 667777777664332111 122345443 2466666666654 46788888889999
Q ss_pred HHHHHHhc------C--C-CCe-EEEcCCCccchHHHH--------hhh------CCcEEEEEeccCCCCcccCHHHHHH
Q 011801 125 ELIMFCLA------N--P-GDA-FLVPSPYYAAFDRDL--------SWR------TGVQIVPVHCDISNNFKITREALEA 180 (477)
Q Consensus 125 ~~i~~~l~------~--~-Gd~-vlv~~P~y~~~~~~~--------~~~------~g~~~~~v~~~~~~~f~i~~~~l~~ 180 (477)
+.++.... + | ..+ |+...-.|.+-.-.+ .|. .|+ +..+|+ . |.++|+.
T Consensus 130 Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~-~~~v~Y------~-d~eale~ 201 (427)
T KOG1402|consen 130 ETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGV-VDKVPY------G-DAEALEV 201 (427)
T ss_pred HHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCc-ceeecc------C-CHHHHHH
Confidence 99886642 1 3 233 343344454321100 000 010 111221 1 6899999
Q ss_pred HHHHHHHhCCCeeEEEEeCCCCCcccCCCHH-HHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCc
Q 011801 181 AYERAQEASINIKGLIITNPSNPLGTTLDRD-TLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDL 259 (477)
Q Consensus 181 ~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~-~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~ 259 (477)
+++. +++.++++.--.--.|.+.|.+ -|+++.++|.+||+++|.||+..+..-.++- .... . + ...+|.
T Consensus 202 ~l~~-----~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~-la~d-~-e--nv~PDi 271 (427)
T KOG1402|consen 202 ALKS-----PNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKL-LACD-Y-E--NVRPDI 271 (427)
T ss_pred HhcC-----CCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcE-EEee-h-h--hcCCCe
Confidence 8874 4777766554477889877655 6999999999999999999999987555542 1110 0 0 012343
Q ss_pred EEEEecCCcccCCCC-ceEEEEEeCCHHHHHHHHH---hcccCCCchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHH
Q 011801 260 IHIIYSLSKDMGLPG-FRVGIVYSFNDTVVNCGRK---MSSFGLVSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHN 335 (477)
Q Consensus 260 viiv~SlSK~~g~~G-~RvG~i~~~~~~i~~~~~~---~~~~~~vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~ 335 (477)
+ + |.|+++ .| +.+..+++.++ +....+. -+.|+ .+++...++.+.|+--. ++-+.+ +.+..-..
T Consensus 272 v-i---lgKalS-GG~~Pvsavl~~~~-im~~~~pgeHgsTyg-gNpLg~~vaiAalevi~--eekL~e---ra~~lG~~ 339 (427)
T KOG1402|consen 272 V-I---LGKALS-GGVYPVSAVLADDD-IMLNIKPGEHGSTYG-GNPLGCAVAIAALEVIV--EEKLVE---RAAKLGEI 339 (427)
T ss_pred E-E---Eecccc-CCeeeeEEEEecHH-HHhccCCCccccccC-CChHHHHHHHHHHHHHH--HHHHHH---HHHHHHHH
Confidence 3 3 358886 55 67888888444 4333322 13344 56666666666664321 222223 33334455
Q ss_pred HHHHHhhCC--C----eEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccC-
Q 011801 336 FTKGLEQVG--I----NCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANM- 408 (477)
Q Consensus 336 l~~~L~~~g--i----~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~- 408 (477)
|...|.++- + .... .-|++.-+.+-.. .....++.+++-. ++++|++--|- | ..-||+.....
T Consensus 340 l~~~L~~l~~~~p~~v~~VR-GrGl~~ai~i~~~--~~~~~~aw~~cl~-lk~~g~LAkpt---H---~~IiRfaPPL~I 409 (427)
T KOG1402|consen 340 LRDQLNKLQKKFPHVVKEVR-GRGLLNAIVINPS--KTSGQDAWDVCLA-LKENGLLAKPT---H---GNIIRFAPPLVI 409 (427)
T ss_pred HHHHHHhccccccchhheee-ccceEEEEEeccc--cccchhHHHHHHc-ccccccccCCC---C---CCeEEecCCccc
Confidence 666666652 1 2222 3457776655421 1111223333333 35668876653 2 34699988654
Q ss_pred CHHHHHHHHHHHHHHHh
Q 011801 409 DDDTLQVALNRIAAFVQ 425 (477)
Q Consensus 409 ~~e~l~~~l~~l~~~~~ 425 (477)
++++++++++.|++.+.
T Consensus 410 ~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 410 SEEDLREGIEAIEKTIA 426 (427)
T ss_pred CHHHHHHHHHHHHHHhc
Confidence 99999999999998763
No 377
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.78 E-value=1.4e-06 Score=84.13 Aligned_cols=283 Identities=19% Similarity=0.216 Sum_probs=160.1
Q ss_pred cCCC----cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCcc-----chHHHHhhhCC----cEEEEEeccCCCCcccCH
Q 011801 109 FDPD----RIVMGGGATGANELIMFCLANPGDAFLVPSPYYA-----AFDRDLSWRTG----VQIVPVHCDISNNFKITR 175 (477)
Q Consensus 109 ~~~~----~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~-----~~~~~~~~~~g----~~~~~v~~~~~~~f~i~~ 175 (477)
+||+ +|---+| +.|+..+..+++.|+|+|.--+--.. +|...-+.... .+-.|+.++++.+ -||.
T Consensus 101 ldp~kWGVNVQp~SG-SPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG-~IDY 178 (477)
T KOG2467|consen 101 LDPEKWGVNVQPYSG-SPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTG-YIDY 178 (477)
T ss_pred CCHHHCceeeccCCC-CchhhHHHhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCC-ceeh
Confidence 5565 3444444 56899999999999999885442222 22221111101 1223555665443 5799
Q ss_pred HHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHH-HHHHHHHHHHhcCeEEEecccccc-cccCCCCcccHHHhhhhc
Q 011801 176 EALEAAYERAQEASINIKGLIITNPSNPLGTTLDRD-TLKSLVSFINDKNIHLVCDEIYAA-TVFSSPKFTSVAEVIQEM 253 (477)
Q Consensus 176 ~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~-~l~~l~~~~~~~~~~lI~De~y~~-~~~~~~~~~s~~~~~~~~ 253 (477)
+.||+..... ++|+|+.. +..+++. +-.++-++|.+.|.++++|-++.- ++-.+ -..+..+.
T Consensus 179 D~Le~~A~~f-----rPk~iiaG------~SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~-vipsPFey---- 242 (477)
T KOG2467|consen 179 DKLEKTATLF-----RPKLIIAG------TSAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAG-VIPSPFEY---- 242 (477)
T ss_pred HHHHHHHHhc-----CCcEEEec------cccchhhccHHHHHHHHHhcCceeehhhhhHHHHHhcc-cCCCcccc----
Confidence 9999887765 88865532 2333333 245555556688999999999843 22222 11222222
Q ss_pred cCCCCcEEEEecCCcccCCCCceEEEEEeCC-----------HHHHHHHHHh--ccc----CCCchHHHHHHHHhcC---
Q 011801 254 DCNRDLIHIIYSLSKDMGLPGFRVGIVYSFN-----------DTVVNCGRKM--SSF----GLVSSQTQYLLASMLS--- 313 (477)
Q Consensus 254 ~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~-----------~~i~~~~~~~--~~~----~~vs~~~q~~~~~~L~--- 313 (477)
..|+..+.+|++ -|-|.|.|.... +...+...+. +-| +....-+..+++.+|.
T Consensus 243 -----~DiVTTTTHKsL--RGPRg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~ 315 (477)
T KOG2467|consen 243 -----CDIVTTTTHKSL--RGPRGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAM 315 (477)
T ss_pred -----cceeeccccccc--cCCcceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhC
Confidence 236778889987 799999987642 1111111111 111 1111222333333333
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCC-ceEEEEeeccc-hhhccCchHHHHHHHHHHHhcCeEEeCCC
Q 011801 314 DDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSN-AGLFFWMDLRH-LLKEKTLEGEIALWRTIVNDVKLNVSPGS 391 (477)
Q Consensus 314 ~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~-~g~~~~~~l~~-~~~~~~~~~e~~l~~~ll~~~gI~v~pg~ 391 (477)
.++| .+.+++..++.+.|.+.|.+.|.+..... .+-.+.++|+. +++....+.-.+++...+++ +..||.
T Consensus 316 tpef-----k~Yq~qV~~Nakala~~l~~~Gy~lvtgGTDnHlvLvDLr~~G~dGarvE~vle~~~I~~NK---NtvpGD 387 (477)
T KOG2467|consen 316 TPEF-----KEYQKQVLKNAKALASALISRGYKLVTGGTDNHLVLVDLRPKGVDGARVEKVLELCHIALNK---NTVPGD 387 (477)
T ss_pred CHHH-----HHHHHHHHHHHHHHHHHHHHcCceEecCCccceEEEEeccccCCchHHHHHHHHHhhhhhcC---CcCCCC
Confidence 3454 55566778888999999999998876533 23456778875 33333223333333333333 223554
Q ss_pred CCCCCCCCEEEEEeccC-----CHHHHHHHHHHHHHHHh
Q 011801 392 SFQCTEPGWFRVCFANM-----DDDTLQVALNRIAAFVQ 425 (477)
Q Consensus 392 ~f~~~~~~~~Rl~~~~~-----~~e~l~~~l~~l~~~~~ 425 (477)
.-. ..|+.+|++...+ -++++++..+-|.+.++
T Consensus 388 ~Sa-l~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av~ 425 (477)
T KOG2467|consen 388 KSA-LSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAVK 425 (477)
T ss_pred ccc-cCCCceeccchhhcccCccHHHHHHHHHHHHHHHH
Confidence 422 3478899987555 36788888877777663
No 378
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.75 E-value=3.1e-06 Score=93.39 Aligned_cols=271 Identities=14% Similarity=0.170 Sum_probs=161.5
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhc-C--CCCeEEEcCCCccchHHHHhh---hCCcEEE
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLA-N--PGDAFLVPSPYYAAFDRDLSW---RTGVQIV 161 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~-~--~Gd~vlv~~P~y~~~~~~~~~---~~g~~~~ 161 (477)
+-++...+++..+ .+..|.-+-.++|.+-+.++.+.. . ++++|+|++-.||.+...++. ..|++++
T Consensus 111 l~e~Qt~i~eLtG--------m~~aNaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~ 182 (939)
T TIGR00461 111 LLNFQTVVSDLTG--------LPVANASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVI 182 (939)
T ss_pred HHHHHHHHHHHHC--------CChhhhhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEE
Confidence 3355555666554 567788888889988887776642 2 348999999999987755441 2388887
Q ss_pred EEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCC
Q 011801 162 PVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSP 241 (477)
Q Consensus 162 ~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~ 241 (477)
.++ .++|++.+ ++.++++.+| |-+|.+.+ +++|++.++++|.+++++---..+..-.
T Consensus 183 ~~~----------~~~l~~~~--------~~~~v~~q~P-n~~G~ied---~~~i~~~~h~~gal~~~~ad~~al~ll~- 239 (939)
T TIGR00461 183 VVD----------CSDIKKAV--------DVFGCLLQYP-ATDGSILD---YKQLIDALHSHKSLVSVAADLMALTLLT- 239 (939)
T ss_pred EEc----------HHHHhhcC--------CEEEEEEECC-CCCeEEec---HHHHHHHHHHcCCEEEEEechHHhCCcC-
Confidence 764 23444332 4678888888 67898875 8899999999999999854333221111
Q ss_pred CcccHHHhhhhccCCCCcEEEEecCCcccCC----CCceEEEEEeCCHHHHHHHHH------------------------
Q 011801 242 KFTSVAEVIQEMDCNRDLIHIIYSLSKDMGL----PGFRVGIVYSFNDTVVNCGRK------------------------ 293 (477)
Q Consensus 242 ~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~----~G~RvG~i~~~~~~i~~~~~~------------------------ 293 (477)
+.. +.+..|+++ .+|.||+ .|--.|++.+.++.+...--+
T Consensus 240 ---~Pg--------e~GaDi~vg-~~q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqh 307 (939)
T TIGR00461 240 ---PPG--------HYGADIVLG-SSQRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQH 307 (939)
T ss_pred ---CHH--------HcCCcEEee-CCCccCCCCCCCCCceeeeeecHhhHhhCCCCceeEEecCCCCccceeeccccccc
Confidence 111 223344444 3444443 355577877754322111000
Q ss_pred ---hcccCCCchHHHHHHH--Hh--cC-ChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEE--Eeeccch
Q 011801 294 ---MSSFGLVSSQTQYLLA--SM--LS-DDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFF--WMDLRHL 363 (477)
Q Consensus 294 ---~~~~~~vs~~~q~~~~--~~--L~-~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~--~~~l~~~ 363 (477)
......+. ..|.+++ +. +. -+ .+-+++..++...+..++.+.|.+.|+++..+ .+|= .++++.
T Consensus 308 IrRekAtSNIC-t~qaL~a~~a~~Y~~~~G---~~GL~~iA~~~~~~a~~l~~~L~~~G~~~~~~--~fF~~~~v~~~~- 380 (939)
T TIGR00461 308 IRRDKATSNIC-TAQVLLANVASSYCVYHG---PKGLKNIARRIHSLTSILANGLENDPHELINK--TWFDTLTVKVGN- 380 (939)
T ss_pred ccccccCcchh-HHHHHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC--CccceEEEEeCC-
Confidence 00010011 1222222 11 11 11 22356777778888889999999999887654 2342 233321
Q ss_pred hhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccC-CHHHHHHHHHHHH
Q 011801 364 LKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANM-DDDTLQVALNRIA 421 (477)
Q Consensus 364 ~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~-~~e~l~~~l~~l~ 421 (477)
. ...++.+.+++ .||+++.. .++.+++|+... ++++++.+++.+.
T Consensus 381 ---~---~~~~i~~~~~~-~gi~l~~~------~~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 381 ---G---ISSELLKAAEE-FNINLRAV------DTTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred ---C---CHHHHHHHHHH-CCCeeeec------CCCEEEEEeecCCCHHHHHHHHHHhc
Confidence 0 11245666654 59998752 245799999775 8999999999985
No 379
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=98.70 E-value=5e-06 Score=79.29 Aligned_cols=270 Identities=14% Similarity=0.117 Sum_probs=164.1
Q ss_pred cCCCcEEEeCChHHHHHHHHHHhc--CCCCeEEEcCCC-ccc----hHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHH
Q 011801 109 FDPDRIVMGGGATGANELIMFCLA--NPGDAFLVPSPY-YAA----FDRDLSWRTGVQIVPVHCDISNNFKITREALEAA 181 (477)
Q Consensus 109 ~~~~~i~~t~G~t~al~~i~~~l~--~~Gd~vlv~~P~-y~~----~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~ 181 (477)
..+++++++.+++--+..++.+.. .+|+.|++++-. |+. ....+... |. ..+. ...+++++++++
T Consensus 91 A~~~Evvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~-~~-----~~~~--~~~~~P~~~~~~ 162 (407)
T COG3844 91 ARAGEVVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLL-GI-----GYDL--EGVIAPRALEEA 162 (407)
T ss_pred CCCCceEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhh-cc-----cccc--eeeeChHHHHHh
Confidence 568899999999888887776654 358899888754 332 11222222 21 1111 123467788888
Q ss_pred HHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEE
Q 011801 182 YERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIH 261 (477)
Q Consensus 182 ~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~vi 261 (477)
+.+ ++.+|+++.-+.-||..++ +.+|-+++++++++++-|-+++...+.- .+ . ..+..+
T Consensus 163 ~~d------d~AvV~L~~V~y~TGql~d---m~aiT~~AH~~galv~wDLAHsaGavp~----~L----h----~~gaDf 221 (407)
T COG3844 163 ITD------DVAVVLLSHVNYKTGQLLD---MRAITALAHQHGALVGWDLAHSAGAVPV----DL----H----AAGADF 221 (407)
T ss_pred hcc------ceEEEEeccccccccceee---HHHHHHHHHhcCceEEeehhcccCCcce----ee----c----ccCCCe
Confidence 865 7888888888889999999 8888889999999999999998532221 11 0 335557
Q ss_pred EEecCCcccCC-CCceEEEEEeCCHHHHHHHHHhcccC------------------------CCchHHHHHHHHhcCChh
Q 011801 262 IIYSLSKDMGL-PGFRVGIVYSFNDTVVNCGRKMSSFG------------------------LVSSQTQYLLASMLSDDE 316 (477)
Q Consensus 262 iv~SlSK~~g~-~G~RvG~i~~~~~~i~~~~~~~~~~~------------------------~vs~~~q~~~~~~L~~~~ 316 (477)
-+++-.|.+.- || -+++++..++........++.++ +.+..+..++...|.-..
T Consensus 222 aigcsyKYLNgGPG-apa~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa 300 (407)
T COG3844 222 AIGCSYKYLNGGPG-APAGLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFA 300 (407)
T ss_pred eeeeeceeccCCCC-CceeEEeccccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhh
Confidence 78888998752 33 34555554433222222222211 112223333333333211
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhC----CCeEecCC----ceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEe
Q 011801 317 FVDNFLVETSKRLAKRHHNFTKGLEQV----GINCLKSN----AGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVS 388 (477)
Q Consensus 317 ~~~~~~~~~~~~l~~r~~~l~~~L~~~----gi~~~~~~----~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~ 388 (477)
+--+.+.+++--...+++++.++.. ++++..|. -|--+.+..|+. .+..+.| .++||..
T Consensus 301 --~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp~~---------~~V~qaL-i~rGVig- 367 (407)
T COG3844 301 --DVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHPHG---------YQVMQAL-IDRGVIG- 367 (407)
T ss_pred --hcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecCcH---------HHHHHHH-HHcCccc-
Confidence 1125556665555667777766653 44444432 233444544532 1344444 4569864
Q ss_pred CCCCCCCCCCCEEEEEeccC--CHHHHHHHHHHHHHHHhh
Q 011801 389 PGSSFQCTEPGWFRVCFANM--DDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 389 pg~~f~~~~~~~~Rl~~~~~--~~e~l~~~l~~l~~~~~~ 426 (477)
.| ..|+-+|++|+-+ +-+++=.+++.|.+++++
T Consensus 368 ---D~--R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t 402 (407)
T COG3844 368 ---DF--REPDVLRFGFTPLYVSFVDVWDAVDALEEVLDT 402 (407)
T ss_pred ---cc--cCCCeeeecCccceechhHHHHHHHHHHHHHHh
Confidence 23 4588999999653 678999999999999986
No 380
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.67 E-value=1.9e-06 Score=81.10 Aligned_cols=194 Identities=20% Similarity=0.235 Sum_probs=128.7
Q ss_pred cccccccC-CCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCC-ccchHHH--
Q 011801 76 FKDIAIFQ-DYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPY-YAAFDRD-- 151 (477)
Q Consensus 76 ~~~~~~Y~-~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~-y~~~~~~-- 151 (477)
|.....|+ |.-|-.-|.+..|+-++.. ...-+.-+.+| |.|+..+++.+++|||..+...-. |....+.
T Consensus 54 f~~stGYGydD~GRdtLe~vyA~vf~aE------~a~VRpq~isG-THAI~~aLfg~LRpgDell~i~G~PYDTLeevIG 126 (416)
T COG4100 54 FTGSTGYGYDDLGRDTLERVYAQVFGAE------AALVRPQIISG-THAIACALFGILRPGDELLYITGSPYDTLEEVIG 126 (416)
T ss_pred cCCCCCCCccccchhHHHHHHHHHhccc------cceeeeeeecc-hhHHHHHHHhccCCCCeEEEecCCcchhHHHHhc
Confidence 44445555 2347677777777777621 11224445555 779999999999999998855432 4434333
Q ss_pred --------HhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCC-CCCcccCCCHHHHHHHHHHHHh
Q 011801 152 --------LSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNP-SNPLGTTLDRDTLKSLVSFIND 222 (477)
Q Consensus 152 --------~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP-~NPtG~~~~~~~l~~l~~~~~~ 222 (477)
++.. |+....+++..+ .++|.+++++++.. ++|+|.|--. ..----.++.+++++++++.++
T Consensus 127 ~rg~~~gSL~df-gi~Y~~v~Lt~~--gkiD~~~v~~~i~~------~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~ 197 (416)
T COG4100 127 LRGEGQGSLKDF-GIKYKAVPLTAD--GKIDIQAVKTAISD------RTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKE 197 (416)
T ss_pred cCCCCcccHHHh-CcceeecccccC--CcccHHHHHHhcCc------cceEEEEEeccCcCCCCcccHHHHHHHHHHHHh
Confidence 2333 677777887754 37999999999875 8998876532 2222224788899999999987
Q ss_pred c--CeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCce--EEEEEeCCHHHHHHHHHhcccC
Q 011801 223 K--NIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFR--VGIVYSFNDTVVNCGRKMSSFG 298 (477)
Q Consensus 223 ~--~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~R--vG~i~~~~~~i~~~~~~~~~~~ 298 (477)
- |+++.+|..|.+++-..++. .-+..++.+|+-|.-| .|+- -||+.+.++.+..+.-++...+
T Consensus 198 inpn~ivFVDNCYGEFvE~~EPt------------~vGaDliAGSLIKNpG-GgiaktGGYiaGk~~~ve~~~yRlTaPG 264 (416)
T COG4100 198 INPNVIVFVDNCYGEFVEEKEPT------------HVGADLIAGSLIKNPG-GGIAKTGGYIAGKAELVEAAAYRLTAPG 264 (416)
T ss_pred cCCCEEEEEeccchhhhhccCcc------------ccchhhhccceeeCCC-CceeeccceeechHHHHHhhceeeecCC
Confidence 4 78999999999864433321 1234467899999876 5532 3789987776666655555543
No 381
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=98.65 E-value=7.3e-06 Score=81.54 Aligned_cols=315 Identities=15% Similarity=0.187 Sum_probs=173.4
Q ss_pred CCCcHHHHHHHHHHHhcccCCCCccC-----CCcEEEeCChHHHHHHHHHHh-------cCCC-----------C-eEEE
Q 011801 85 YHGLPEFRQAVAKFMGKGRGGRVTFD-----PDRIVMGGGATGANELIMFCL-------ANPG-----------D-AFLV 140 (477)
Q Consensus 85 ~~G~~~lr~aia~~~~~~~g~~~~~~-----~~~i~~t~G~t~al~~i~~~l-------~~~G-----------d-~vlv 140 (477)
.+...||...+.+|+++..+.+..+- +---++-..++++...++.+- .+.+ + .+..
T Consensus 108 sPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y~ 187 (511)
T KOG0628|consen 108 SPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAYC 187 (511)
T ss_pred CcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEEe
Confidence 34578999999999998776443221 122333344445554443331 1222 1 2334
Q ss_pred cCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHH
Q 011801 141 PSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFI 220 (477)
Q Consensus 141 ~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~ 220 (477)
.+-++......+... |+++..++.+. ||.++.+.|++++++..++|-=+ .+++.+- -|-.+..-+++.+|..+|
T Consensus 188 SDqahssveka~~i~-~VklR~l~td~--n~~mr~~~L~~AIe~D~arGlIP-f~v~at~--GTT~~ca~D~l~elg~Vc 261 (511)
T KOG0628|consen 188 SDQAHSSVEKACLIA-GVKLRALPTDE--NFGMRGDTLRKAIEEDIARGLIP-FFVCATL--GTTSSCAFDELEELGPVC 261 (511)
T ss_pred cCcccchHHHhHhhc-ceeEEEeeccc--CcCCCHHHHHHHHHHHHhCCCcc-EEEEEee--cCccccccccHHHhcchh
Confidence 455666666655544 89988888775 89999999999999887776433 3333221 122334567899999999
Q ss_pred HhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCC-----------HHHHH
Q 011801 221 NDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFN-----------DTVVN 289 (477)
Q Consensus 221 ~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~-----------~~i~~ 289 (477)
+++++|+.+|.+|++..|.=+.+......++. .+. +-.-.||.+ +.-+-+.-+...+ +...+
T Consensus 262 ~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~----aDS--fn~n~hK~~-~vnfDCs~lWvkd~~~~~~~~~vdp~yL~ 334 (511)
T KOG0628|consen 262 REEGLWLHVDAAYAGSAFICPEFRYLMRGIEY----ADS--FNFNPHKWL-LVNFDCSPLWVKDGTKLSRAFNVDPLYLK 334 (511)
T ss_pred hhcCEEEEeehhhccccccCHHHHHHhhcchh----hcc--ccCChhhee-EEeeeeecceeecCceeeeeeecChHhhc
Confidence 99999999999999887766665554444331 111 112345544 2333333322222 11111
Q ss_pred HHH--Hhccc--CCCc------hHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEec-CCceEEEE
Q 011801 290 CGR--KMSSF--GLVS------SQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLK-SNAGLFFW 357 (477)
Q Consensus 290 ~~~--~~~~~--~~vs------~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~-~~~g~~~~ 357 (477)
... ....| |.++ ++-.+...+.+.-..+ ++++++ ..+..+.+.+.+.+. .+++.. ..-|+.+
T Consensus 335 h~~~~~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~l-q~~iR~----h~~La~~fe~lv~~d~~FE~~~~~~lgLvc- 408 (511)
T KOG0628|consen 335 HAYQGSAPDYRHWQIPLGRRFRSLKLWFVLRSYGVENL-QNYIRE----HVRLAKEFETLVRADPRFEIVNKRILGLVC- 408 (511)
T ss_pred chhhccCCCccccccccccchhhHHHHHHHHHHhHHHH-HHHHHH----HHHHHHHHHHHhhcCCcceeecccccceeE-
Confidence 100 01111 1111 1222222233322222 222222 122222333333222 344433 3344433
Q ss_pred eeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccC--CHHHHHHHHHHHHHHHhh
Q 011801 358 MDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANM--DDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 358 ~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~--~~e~l~~~l~~l~~~~~~ 426 (477)
+++.+. . +...+|..++.....|.+.|.+. .+.-.+|++++.. ++++++++.+.|.+....
T Consensus 409 FRlk~~----N-~~ne~Ll~~in~~g~i~l~~~~l---~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~ 471 (511)
T KOG0628|consen 409 FRLKGD----N-EINEALLNRLNSSGRIHLVPASL---HGKFVLRFAVCSPLTNESDIDEAWKIIFEAADE 471 (511)
T ss_pred EeecCC----c-HHHHHHHHHHHhcCcEEEEEeee---cceEEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Confidence 455532 1 22236788888888898888753 2344799999764 789999999999988765
No 382
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.65 E-value=4.5e-06 Score=82.68 Aligned_cols=297 Identities=16% Similarity=0.175 Sum_probs=152.9
Q ss_pred CcEEEeCChHHHHH-HHHHHhc--CCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccC-CCCcccCHHHHHHHHHHHHH
Q 011801 112 DRIVMGGGATGANE-LIMFCLA--NPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDI-SNNFKITREALEAAYERAQE 187 (477)
Q Consensus 112 ~~i~~t~G~t~al~-~i~~~l~--~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~-~~~f~i~~~~l~~~~~~~~~ 187 (477)
...++.+.+|+.-. +.+.++. ..++.|+.+.-..-....++... |.+++.|+... .+....|.+++++.+++.
T Consensus 75 ~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~A-Gl~~~vV~~~~~~d~l~td~~~ie~~i~~~-- 151 (389)
T PF05889_consen 75 KSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERA-GLEPVVVENVLEGDELITDLEAIEAKIEEL-- 151 (389)
T ss_dssp CEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHT-T-EEEEE-EEEETTEEEEHHHHHHHHHHHH--
T ss_pred cceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhc-CCeEEEeeccCCCCeeeccHHHHHHHHHHh--
Confidence 45777777665433 3333443 45788888876543344455555 99988888532 234455788888888654
Q ss_pred hCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCc-EEEEecC
Q 011801 188 ASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDL-IHIIYSL 266 (477)
Q Consensus 188 ~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~-viiv~Sl 266 (477)
+....+.+++.++--.|..- |++++|.++|+++|+..|+..+|+ ..... +...++.. +..++ ..++.|+
T Consensus 152 -G~~~iLcvltttscfapr~~--D~i~~IakiC~~~~IPhlvNnAYg---vQ~~~---~~~~i~~a-~~~GRvda~vqS~ 221 (389)
T PF05889_consen 152 -GADNILCVLTTTSCFAPRLP--DDIEEIAKICKEYDIPHLVNNAYG---VQSSK---CMHLIQQA-WRVGRVDAFVQST 221 (389)
T ss_dssp -CGGGEEEEEEESSTTTTB------HHHHHHHHHHHT--EEEEGTTT---TT-HH---HHHHHHHH-HHHSTCSEEEEEH
T ss_pred -CCCCeEEEEEecCccCCCCC--ccHHHHHHHHHHcCCceEEccchh---hhHHH---HHHHHHHH-HhcCCcceeeeec
Confidence 44555667777765555553 369999999999999999999997 22211 11111110 01122 3678899
Q ss_pred CcccCCCCceEEEEEeCCHHHHHHHHHhcccCCCchHHHHHHHHhcCCh--hhHHHHHHHHHHHHHHHHHHHHHHHhhCC
Q 011801 267 SKDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSDD--EFVDNFLVETSKRLAKRHHNFTKGLEQVG 344 (477)
Q Consensus 267 SK~~g~~G~RvG~i~~~~~~i~~~~~~~~~~~~vs~~~q~~~~~~L~~~--~~~~~~~~~~~~~l~~r~~~l~~~L~~~g 344 (477)
-|.| +-+..-+.+.++++..+....+..+.-...++....+..+|.-+ .+ ...+.++.+.+....+.+.+.-++.+
T Consensus 222 dkNF-~VPvGgai~As~~~~~i~~vs~~YpGRas~sp~ld~~itLl~LG~~g~-~~ll~~r~~~f~~l~erl~~~aee~~ 299 (389)
T PF05889_consen 222 DKNF-MVPVGGAIMASFDPSGILAVSKEYPGRASASPSLDLFITLLSLGCTGY-GALLKERKASFPYLKERLKKWAEEVG 299 (389)
T ss_dssp HHHH-CEESSHEEEEESSHHHHHHHHHTSHSHBTSHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCE-EecCCCcEEEecCHHHHHHHHHHhhhhhhcccchHHHHHHHHHhhhHH-HHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999 56666678888887766665554333223334445555555432 22 22233322222222222322223334
Q ss_pred CeEec-CCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeE----EeCCCCC---CCCC--CCEEEE-EeccCCHHHH
Q 011801 345 INCLK-SNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLN----VSPGSSF---QCTE--PGWFRV-CFANMDDDTL 413 (477)
Q Consensus 345 i~~~~-~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~----v~pg~~f---~~~~--~~~~Rl-~~~~~~~e~l 413 (477)
-.+.. |.....+-+.++.+..... ....+.-..|..+||. |.|+..+ +.+. -.++-+ |--.+++|++
T Consensus 300 e~ll~~p~N~is~a~tl~~l~~~~~--k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~AsaiG~~~eev 377 (389)
T PF05889_consen 300 ERLLETPRNHISMAFTLDTLYEISQ--KDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPCPYLTAASAIGMTREEV 377 (389)
T ss_dssp EEBSSSTT-SSEEEEE-TTCCTCCS--SHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--SSSEEEEEE-TT--HHHH
T ss_pred hhhcCCCCCCeeEEEECccchhhcc--chhhhHHHHHHhCCcccceeeccCCCcccccCCCCchHHHHHHHHhCCCHHHH
Confidence 23322 2222344456664322211 1122333344455653 3333222 1111 257777 4434699999
Q ss_pred HHHHHHHHHHHh
Q 011801 414 QVALNRIAAFVQ 425 (477)
Q Consensus 414 ~~~l~~l~~~~~ 425 (477)
+.++++|+++++
T Consensus 378 d~~v~rL~k~i~ 389 (389)
T PF05889_consen 378 DYFVKRLDKIIK 389 (389)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC
Confidence 999999999874
No 383
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.60 E-value=1e-05 Score=80.72 Aligned_cols=304 Identities=15% Similarity=0.193 Sum_probs=185.2
Q ss_pred CCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHh---cC--CC---CeEEEcCCCccchHHHHhhhCC
Q 011801 86 HGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCL---AN--PG---DAFLVPSPYYAAFDRDLSWRTG 157 (477)
Q Consensus 86 ~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l---~~--~G---d~vlv~~P~y~~~~~~~~~~~g 157 (477)
++..++..++.+++...++.+ +...=..|.|+|+++....... .. .| ..++++.-....+...++.. +
T Consensus 116 p~~~~~e~~~Vnm~~~L~~~~---~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf-~ 191 (491)
T KOG1383|consen 116 PVVRKLEAECVNMIANLFNAP---SDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYF-E 191 (491)
T ss_pred chhHHHHHHHHHHHHHHhcCC---ccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhE-E
Confidence 466788888888877766533 2244566889999955443332 11 12 35677777777888877766 9
Q ss_pred cEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHh-cCeEEEeccccccc
Q 011801 158 VQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFIND-KNIHLVCDEIYAAT 236 (477)
Q Consensus 158 ~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~-~~~~lI~De~y~~~ 236 (477)
+++..|++++ +.|.+|+.++.+.+.+ ++.+|+..-|+-|+|..=+ +++|.++.-+ +++.+.+|.+-+++
T Consensus 192 v~l~~V~~~~-~~~~~D~~k~~~~i~e------Nti~lv~~~~~~p~G~~e~---ve~l~~l~~e~w~ipiHvDa~~GgF 261 (491)
T KOG1383|consen 192 VELREVPLDE-GDYRVDPGKVVRMIDE------NTIMLVGSLPNFPTGEIED---VEKLADLLLEIWDIPIHVDACLGGF 261 (491)
T ss_pred EEEEeeeccc-cceEecHHHHHHHhcc------ceEEEEEEcCCCCccchhh---HHHHHHHHHHHhCCceeecccCccc
Confidence 9999999986 6899999999999876 8899999999999999866 7777777777 99999999999875
Q ss_pred ccC--CCCcccHHHhhhhccCC-CCcEEEEecCCcccCCCCceEEEEEeCCHHHHHH-HHH--------hcccCC----C
Q 011801 237 VFS--SPKFTSVAEVIQEMDCN-RDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNC-GRK--------MSSFGL----V 300 (477)
Q Consensus 237 ~~~--~~~~~s~~~~~~~~~~~-~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~-~~~--------~~~~~~----v 300 (477)
+-. ...+. +.|.. +...-+-.+-+| +|+.--..||++-.++.+... +.. ..+++. .
T Consensus 262 i~p~~~~~~~-------~fdFr~p~V~Sisa~~HK-YGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~ 333 (491)
T KOG1383|consen 262 INPAGYLNEE-------EFDFRVPGVTSISADGHK-YGLAPAGSSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRP 333 (491)
T ss_pred cccccccCcc-------ccccCCCCceeEeeccce-eeeeecCcEEEEEcccccccceEEEeccccCccccCcccccCCc
Confidence 431 11110 11111 222223334455 566555589988765543221 100 011111 1
Q ss_pred ch--HHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEecCCceEEEEeeccchhhccCchHHHHHHH
Q 011801 301 SS--QTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWR 377 (477)
Q Consensus 301 s~--~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~ 377 (477)
++ ..|++ ++++-++ +.| .+..+.+.+....+.+++++. ++.+.....--|+..+-.. -++-++ .
T Consensus 334 g~~va~~wa--~~~~lG~--eGY-~~~~~~ive~~~~l~egie~i~~i~i~gkp~vs~~~~~s~~-------~~i~el-s 400 (491)
T KOG1383|consen 334 GSQVAAQWA--ALMSLGE--EGY-RENTQNIVETARKLREGIENIKGIKIVGKPLVSFILFGSND-------VNIFEL-S 400 (491)
T ss_pred ccHHHHHHH--HHHHhhH--HHH-HHHHHHHHHHHHHHHHhhhccccceecCCCcEEEEEccCCc-------cchhhh-h
Confidence 22 34444 3444332 333 344556777888899999987 6665543221122221111 111123 4
Q ss_pred HHHHhcCeEEeCCCCCCCCCCCEEEEEeccC--CHHHHHHHHHHHHHHHhhhhc
Q 011801 378 TIVNDVKLNVSPGSSFQCTEPGWFRVCFANM--DDDTLQVALNRIAAFVQQDKE 429 (477)
Q Consensus 378 ~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~--~~e~l~~~l~~l~~~~~~~~~ 429 (477)
.++.+.|..+ |+-.| |..+-+|+... .++-.++++.-|++++.+...
T Consensus 401 d~l~~~GW~l-nalq~----P~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~ 449 (491)
T KOG1383|consen 401 DLLRKKGWIL-NALQF----PAAIHICVTRVHAREDVADRFVADIRKVVEELKS 449 (491)
T ss_pred HHHHhcCcCc-cccCC----CCceEEEEEeeeccHHHHHHHHHHHHHHHHHHHh
Confidence 4566778877 33322 33456666543 455568888889998877654
No 384
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.52 E-value=1.7e-05 Score=78.76 Aligned_cols=178 Identities=18% Similarity=0.148 Sum_probs=120.5
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEE-----EcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHH
Q 011801 110 DPDRIVMGGGATGANELIMFCLANPGDAFL-----VPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYER 184 (477)
Q Consensus 110 ~~~~i~~t~G~t~al~~i~~~l~~~Gd~vl-----v~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~ 184 (477)
..+.+++++..+.|+.++...+..++..|+ |+ ++.+.....++.. |++++.+.... .....+++.++.+
T Consensus 82 ~aea~~ivnnn~aAVll~~~al~~~~EvVis~g~lV~-gg~~~v~d~~~~a-G~~l~EvG~tn----~t~~~d~~~AIne 155 (395)
T COG1921 82 GAEAAAIVNNNAAAVLLTLNALAEGKEVVVSRGELVE-GGAFRVPDIIRLA-GAKLVEVGTTN----RTHLKDYELAINE 155 (395)
T ss_pred chhheeeECCcHHHHHHHHhhhccCCeEEEEcccccc-CCCCChhHHHHHc-CCEEEEecccC----cCCHHHHHHHhcc
Confidence 368899999999999999999987655544 33 4666677788877 99999987542 2468889998865
Q ss_pred HHHhCCCeeEEEEeCCCCC-cccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEE
Q 011801 185 AQEASINIKGLIITNPSNP-LGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHII 263 (477)
Q Consensus 185 ~~~~~~~~k~vii~nP~NP-tG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv 263 (477)
++++++-..-+|- -=..++ +++++++|+++|+.+++|.+-...+-.. ......+ ..+..+++
T Consensus 156 ------~ta~llkV~s~~~~f~~~l~---~~~l~~ia~~~~lpvivD~aSg~~v~~e---~~l~~~l-----a~GaDLV~ 218 (395)
T COG1921 156 ------NTALLLKVHSSNYGFTGMLS---EEELVEIAHEKGLPVIVDLASGALVDKE---PDLREAL-----ALGADLVS 218 (395)
T ss_pred ------CCeeEEEEeecccccccccc---HHHHHHHHHHcCCCEEEecCCccccccc---cchhHHH-----hcCCCEEE
Confidence 7777766655553 222345 6778888899999999999886543222 2333333 23555788
Q ss_pred ecCCcccCCCCceEEEEEeCCHHHHHHHHHh-ccc-CCCchHHHHHHHHhcC
Q 011801 264 YSLSKDMGLPGFRVGIVYSFNDTVVNCGRKM-SSF-GLVSSQTQYLLASMLS 313 (477)
Q Consensus 264 ~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~-~~~-~~vs~~~q~~~~~~L~ 313 (477)
+|-.|.|| |.+.|.|++.++.| ..+++. ..+ .-+...+-.++.+.|+
T Consensus 219 ~SgdKllg--GPqaGii~GkKelI-~~lq~~~l~Ralrv~K~tla~l~~aLe 267 (395)
T COG1921 219 FSGDKLLG--GPQAGIIVGKKELI-EKLQSHPLKRALRVDKETLAALEAALE 267 (395)
T ss_pred EecchhcC--CCccceEechHHHH-HHHHhhhhhhhhhcCcHhHHHHHHHHH
Confidence 89999995 88899999966555 444332 111 1244455454444443
No 385
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.46 E-value=0.00038 Score=69.18 Aligned_cols=277 Identities=19% Similarity=0.268 Sum_probs=159.5
Q ss_pred HHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhc---CCCCeEEEcCCCccchHHHHhhhC---CcEEEEE
Q 011801 90 EFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLA---NPGDAFLVPSPYYAAFDRDLSWRT---GVQIVPV 163 (477)
Q Consensus 90 ~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~---~~Gd~vlv~~P~y~~~~~~~~~~~---g~~~~~v 163 (477)
++..-+++..+ .+-.|--+--++|.+-+.++.+.. ++..+|+|+.-+||.+...++.++ |.+++.+
T Consensus 124 efQtlv~dLTG--------m~VANASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~ 195 (450)
T COG0403 124 EFQTLVADLTG--------LDVANASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVV 195 (450)
T ss_pred HHHHHHHHHhC--------CCcccchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEe
Confidence 44455555544 444566666778877777766642 235899999999999887776543 5667666
Q ss_pred eccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEec-ccccccccCCCC
Q 011801 164 HCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCD-EIYAATVFSSPK 242 (477)
Q Consensus 164 ~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~D-e~y~~~~~~~~~ 242 (477)
+.+ |.++|+++ .. ..+.++++.+|+ -.|.. .+++++|.+.+++++.++++= |.-+-.....|.
T Consensus 196 ~~~-------d~~~l~~~-~~-----~~~~gv~vQyP~-~~G~~--~~d~~~l~~~~h~~~al~~v~aDplaL~LL~pPG 259 (450)
T COG0403 196 DAD-------DLDDLESA-DD-----GDVFGVLVQYPN-TFGIV--EEDLRALIEAAHSAGALVIVAADPLALGLLKPPG 259 (450)
T ss_pred ccc-------hhhhhhhc-cc-----cCeEEEEEecCC-CCCcc--chhHHHHHHHHhhcCCEEEEEechhHhhccCCcc
Confidence 653 56777766 32 278899999885 56633 345999999999998877742 111111121111
Q ss_pred cccHHHhhhhccCCCCcEEEEecCC---cccCCCCceEEEEEeCCHHHHHH---------------------------HH
Q 011801 243 FTSVAEVIQEMDCNRDLIHIIYSLS---KDMGLPGFRVGIVYSFNDTVVNC---------------------------GR 292 (477)
Q Consensus 243 ~~s~~~~~~~~~~~~~~viiv~SlS---K~~g~~G~RvG~i~~~~~~i~~~---------------------------~~ 292 (477)
..+..|++++.. =-+|+.|-.+||..+.++..++. ++
T Consensus 260 -------------e~GADIvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIR 326 (450)
T COG0403 260 -------------EFGADIVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIR 326 (450)
T ss_pred -------------ccCCceEEecCcccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHh
Confidence 345567887654 33666788899988755432110 11
Q ss_pred Hh--cccCCCchHHHHHHH-HhcC--ChhhHHHHHHHHHHHHHHHHHHHHHHHhhC--CCeEecCCceEEE--Eeeccch
Q 011801 293 KM--SSFGLVSSQTQYLLA-SMLS--DDEFVDNFLVETSKRLAKRHHNFTKGLEQV--GINCLKSNAGLFF--WMDLRHL 363 (477)
Q Consensus 293 ~~--~~~~~vs~~~q~~~~-~~L~--~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~--gi~~~~~~~g~~~--~~~l~~~ 363 (477)
+- .+-. ++.+.-.+++ ++.. .+ .+-+++...+..+...++.++|++. |+++... .+|= .++++.
T Consensus 327 ReKATSNI-CTnQaLlA~~As~y~~~hG---p~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~--~fFdt~~v~~~~- 399 (450)
T COG0403 327 REKATSNI-CTNQALLALAASMYAVYHG---PQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFD--HFFDTFTVRVPE- 399 (450)
T ss_pred hhccchhh-hHHHHHHHHHHHHHHHHhC---hHHHHHHHHHHHHHHHHHHHHHhhcCCceEeccc--cceeeEEEecch-
Confidence 00 1111 1222211111 1111 11 2346777888888889999999965 4665543 3553 334332
Q ss_pred hhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccC-CHHHHHHHHHHHHHH
Q 011801 364 LKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANM-DDDTLQVALNRIAAF 423 (477)
Q Consensus 364 ~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~-~~e~l~~~l~~l~~~ 423 (477)
+....+.++.+ ..|+.++.- .++.+=+|+... ++++++.+++.+...
T Consensus 400 ------~~~~~l~~~~~-~~G~~L~~~------~~~~~~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 400 ------EVAEALLAAAI-AGGINLRRV------DADTVLIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred ------hHHHHHHHHHH-hcCCceeee------cCCceEEEeecccCHHHHHHHHHHHhhh
Confidence 11112333333 347776532 133455666544 678888888877654
No 386
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=98.37 E-value=4.9e-05 Score=77.12 Aligned_cols=262 Identities=17% Similarity=0.220 Sum_probs=131.1
Q ss_pred cCCCcEEEeCChHHHHHHHHHHh---cCCCCeEEEcCCCccchHHHHhhh---CCcEEEEEeccCCCCcccCHHHHHHHH
Q 011801 109 FDPDRIVMGGGATGANELIMFCL---ANPGDAFLVPSPYYAAFDRDLSWR---TGVQIVPVHCDISNNFKITREALEAAY 182 (477)
Q Consensus 109 ~~~~~i~~t~G~t~al~~i~~~l---~~~Gd~vlv~~P~y~~~~~~~~~~---~g~~~~~v~~~~~~~f~i~~~~l~~~~ 182 (477)
.+..+.-+-.|++.+-+.++.+. .+..++|+++.-.+|.+...++.+ .|++++.++++..+ ..|
T Consensus 125 mdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~~--~~d-------- 194 (429)
T PF02347_consen 125 MDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDEDG--TTD-------- 194 (429)
T ss_dssp SSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTTC--SB---------
T ss_pred CCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecccccC--Ccc--------
Confidence 34334456667777766655443 233469999999999887644432 38999999987533 222
Q ss_pred HHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEE
Q 011801 183 ERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHI 262 (477)
Q Consensus 183 ~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~vii 262 (477)
+.++.+|+++|| |-.|.+-+ +++|.++++++|.++++ .+.-- .... ..+.. ..+..|+
T Consensus 195 ------~~~~a~v~vq~P-n~~G~~ed---~~~i~~~~h~~gal~~~-~ad~~-aL~~--l~~Pg--------e~GADI~ 252 (429)
T PF02347_consen 195 ------DDDTAAVMVQNP-NTFGVFED---IKEIADIAHAAGALVIV-GADPN-ALGG--LKSPG--------EYGADIV 252 (429)
T ss_dssp ------STTEEEEEEESS--TTSB--T---HHHHHHHHHHTT-EEEE-CGGCC-GCCT--C--GG--------GGT-SEE
T ss_pred ------ccCeEEEEeecC-CCCceEee---HHHHHHHHHHcCCEEEE-ecCHH-HHhC--cCChh--------hcCccEE
Confidence 238999999999 56888866 89999999999998886 33211 1111 11111 2234455
Q ss_pred EecCCcccCC----CCceEEEEEeCCHHHHHHH---------------------------HHh--cccCCCchHHHHHHH
Q 011801 263 IYSLSKDMGL----PGFRVGIVYSFNDTVVNCG---------------------------RKM--SSFGLVSSQTQYLLA 309 (477)
Q Consensus 263 v~SlSK~~g~----~G~RvG~i~~~~~~i~~~~---------------------------~~~--~~~~~vs~~~q~~~~ 309 (477)
+++ +|.||. .|--+|++.+.++.+...- ++- .+.. ++.++-.++.
T Consensus 253 vg~-~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNI-ctnqaL~A~~ 330 (429)
T PF02347_consen 253 VGE-HQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNI-CTNQALLALA 330 (429)
T ss_dssp EEC-CTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT----SS-HHHHHH
T ss_pred eeC-CCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchhhhh-hhhHHHHHHH
Confidence 665 677664 4566888888654322111 100 1111 1222222211
Q ss_pred --HhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeE
Q 011801 310 --SMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-GINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLN 386 (477)
Q Consensus 310 --~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~ 386 (477)
..+.--. .+-+++..++...+..++.+.|.+. ++.+..+.---|+....+. ....++.++.+.. |+.
T Consensus 331 a~~Yl~~~G--~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~~~~~f~e~v~~~~~~-------~~~~~l~~~~~~~-gl~ 400 (429)
T PF02347_consen 331 AAIYLAYLG--PEGLREIAERIHLNAHYLAERLKKIYGLPFDNPFFFEFVVVFSKD-------KEVEELLKRGIEG-GLN 400 (429)
T ss_dssp HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHCCTTBECSSSSSBSSEEEEESS--------HHHHHHHHTT-----EE
T ss_pred HHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCceeeeeecCCc-------HHHHHHHHHHHhc-CCC
Confidence 2222111 3346788888899999999999986 3333222211133333221 1111233333322 433
Q ss_pred EeCCCCCCCCCCCEEEEEeccC-CHHHHHHHHHHH
Q 011801 387 VSPGSSFQCTEPGWFRVCFANM-DDDTLQVALNRI 420 (477)
Q Consensus 387 v~pg~~f~~~~~~~~Rl~~~~~-~~e~l~~~l~~l 420 (477)
. ...+.+++-+|+.-. +++++|.+++.+
T Consensus 401 ~------~~~~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 401 L------RYPDDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp E------GGG-SSEEEEE--TT--HHHHHHHHH--
T ss_pred c------cccCCCeEEEEccCCCCHHHHHHHHhcC
Confidence 3 222355788898765 889999988764
No 387
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.18 E-value=2.1e-06 Score=84.34 Aligned_cols=162 Identities=19% Similarity=0.219 Sum_probs=39.2
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCC---ccc---hHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHH
Q 011801 111 PDRIVMGGGATGANELIMFCLANPGDAFLVPSPY---YAA---FDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYER 184 (477)
Q Consensus 111 ~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~---y~~---~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~ 184 (477)
.+..+++++...|+.+++..|+ +|..|++..-- +.+ ....++.. |++++.|-... +-.++++++++.+
T Consensus 62 AeaA~VvNnnaAAv~L~l~~la-~~~EvIvsRGelVeiGgsFRip~vm~~s-Ga~lvEVGttN----~t~~~Dye~AI~e 135 (367)
T PF03841_consen 62 AEAALVVNNNAAAVLLALNTLA-KGKEVIVSRGELVEIGGSFRIPDVMRQS-GARLVEVGTTN----RTHLSDYEKAITE 135 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccc-cccccccccccccccccccccccccccc-ccccccccccc----ccccccccccccc
Confidence 5778888888899999998886 45566665432 222 22445555 99999888642 3467888999876
Q ss_pred HHHhCCCeeEEEEeCCCCCc--ccCCCHHHHHHHHHHHHhcCeEEEecccccccc----cCCCCcccHHHhhhhccCCCC
Q 011801 185 AQEASINIKGLIITNPSNPL--GTTLDRDTLKSLVSFINDKNIHLVCDEIYAATV----FSSPKFTSVAEVIQEMDCNRD 258 (477)
Q Consensus 185 ~~~~~~~~k~vii~nP~NPt--G~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~----~~~~~~~s~~~~~~~~~~~~~ 258 (477)
++.+++..+++|-. |.+- .-.++++++++++||+.+|+|-.-..+. |.-+.-.++.+.+ ..+
T Consensus 136 ------~Ta~ll~Vh~Sn~~i~GFt~-~~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~-----~~G 203 (367)
T PF03841_consen 136 ------NTAALLKVHTSNFRIQGFTG-EVSLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYL-----AAG 203 (367)
T ss_dssp --------------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CC-----CCT
T ss_pred ------cccccccccccccccccccc-cccHHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHh-----hcC
Confidence 88899999998863 3221 1248889999999999999998763221 1112223444443 335
Q ss_pred cEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHH
Q 011801 259 LIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRK 293 (477)
Q Consensus 259 ~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~ 293 (477)
..++++|-.|.+| |-..|+|++..+.+ +.+++
T Consensus 204 aDlV~fSGdKlLG--GPQaGiI~Gkk~lI-~~lk~ 235 (367)
T PF03841_consen 204 ADLVTFSGDKLLG--GPQAGIIVGKKELI-EKLKK 235 (367)
T ss_dssp -SEEEEETTSSSS--S-S-EEEEEEHHHH-HHHHH
T ss_pred CCEEEEECCCcCC--CCCeEEEEeCHHHH-HHHhh
Confidence 5678889999996 66689999965544 44443
No 388
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=97.99 E-value=0.00073 Score=65.39 Aligned_cols=217 Identities=14% Similarity=0.166 Sum_probs=119.6
Q ss_pred HHHHHHHHHHHHHhCCCeeEEEEeCCCCCcc-cCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhc
Q 011801 175 REALEAAYERAQEASINIKGLIITNPSNPLG-TTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEM 253 (477)
Q Consensus 175 ~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG-~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~ 253 (477)
++++|+.|.+..+.+..+.++++.--..--| ...+++-.+.|-+++++|++.+|+||+.-+..-.+ .++.-.. .
T Consensus 255 l~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTG-k~WaHeh----w 329 (484)
T KOG1405|consen 255 LAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATG-KFWAHEH----W 329 (484)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccC-ceeeehh----c
Confidence 6778888888877666777766653355555 46788999999999999999999999997543222 1221110 0
Q ss_pred cCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHH-HHHHhcccCCCchHHH---HHHHHhcCChhhHHHHHHHHHHHH
Q 011801 254 DCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVN-CGRKMSSFGLVSSQTQ---YLLASMLSDDEFVDNFLVETSKRL 329 (477)
Q Consensus 254 ~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~-~~~~~~~~~~vs~~~q---~~~~~~L~~~~~~~~~~~~~~~~l 329 (477)
+......++ +|||-|- .| ||... ++.... ..+.+..+. ..+.-. ..+...+++.++++ ..
T Consensus 330 ~l~~PpD~v--TFSKK~q-~g---Gffh~-~~frpn~pYrifNTWm-GdP~k~lll~~vv~~I~~~~Ll~--------n~ 393 (484)
T KOG1405|consen 330 NLDSPPDVV--TFSKKFQ-TG---GFFHD-EEFRPNEPYRIFNTWM-GDPSKNLLLEEVVQEIKREDLLN--------NV 393 (484)
T ss_pred CCCCCccce--ehhhhhh-cC---ccccC-cccCCCchHHHhhhhc-CChHHHHHHHHHHHHHhHHHHHH--------HH
Confidence 112222233 8999985 55 55443 222211 223333332 222111 12223344444311 11
Q ss_pred HHHHHHHHHHHhhC-----C-CeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEE
Q 011801 330 AKRHHNFTKGLEQV-----G-INCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRV 403 (477)
Q Consensus 330 ~~r~~~l~~~L~~~-----g-i~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl 403 (477)
+..-+.|.++|.++ | +.-... -|-|+-+++|..-.. ..++. +++-.||.+-- .+...+|+
T Consensus 394 ~~vG~~l~~gL~~Lq~~~p~~~~~~RG-rGTF~a~d~ps~~~R------dk~i~-~~~~nGv~~GG------Cg~~siRf 459 (484)
T KOG1405|consen 394 AHVGKALLKGLLELQAKYPGKINNLRG-RGTFIAWDCPSGSIR------DKLIL-IARLNGVNLGG------CGDKSIRF 459 (484)
T ss_pred HHHHHHHHHHHHHHHHhCchhhhcccc-cceEEEEeCCChHHH------HHHHH-HHHHcCceecc------cccceeee
Confidence 22223444444432 1 222333 345777888853211 12333 34455887632 13455777
Q ss_pred EeccC-CHHHHHHHHHHHHHHHhh
Q 011801 404 CFANM-DDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 404 ~~~~~-~~e~l~~~l~~l~~~~~~ 426 (477)
-.+.. .+...+.+++++.+.++.
T Consensus 460 RPsLvf~~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 460 RPSLVFRKHHADIFLDIFDKILAG 483 (484)
T ss_pred ccceeehhhhHHHHHHHHHHHhcc
Confidence 66554 788999999999988754
No 389
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.97 E-value=0.005 Score=64.10 Aligned_cols=314 Identities=20% Similarity=0.309 Sum_probs=174.3
Q ss_pred cccccccCCC---CCcHHHHHHHHHHHhcccCCCCccCCCcEEE--eCChHH---HHHHHHHHhcCCCC----eEEEcCC
Q 011801 76 FKDIAIFQDY---HGLPEFRQAVAKFMGKGRGGRVTFDPDRIVM--GGGATG---ANELIMFCLANPGD----AFLVPSP 143 (477)
Q Consensus 76 ~~~~~~Y~~~---~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~--t~G~t~---al~~i~~~l~~~Gd----~vlv~~P 143 (477)
|..+.-|.|. +|+.++-..+.+++.+..| + |++.+ .+|+++ ++..+=..+-..|+ .-|+|.-
T Consensus 565 fanIHPF~P~eQaqGY~~lf~~Le~~Lc~iTG----~--D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvS 638 (1001)
T KOG2040|consen 565 FANIHPFAPVEQAQGYQQLFTELEKDLCEITG----F--DSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVS 638 (1001)
T ss_pred hccCCCCCchHHHhhHHHHHHHHHHHhheeec----c--cceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeec
Confidence 3445555553 5888899999999988766 3 44444 444443 33333333434443 4566666
Q ss_pred CccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc
Q 011801 144 YYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDK 223 (477)
Q Consensus 144 ~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~ 223 (477)
.+...-..+... |.++++|.++..+ .+|..+|++..+++ ..+..++.++.|+. .|.. .+.+++++++..++
T Consensus 639 AHGTNPASA~Ma-gmkvvpV~~~~~G--~id~~dLk~kaekh---~~~Laa~MvTYPST-~Gvf--E~~i~d~cd~iHeh 709 (1001)
T KOG2040|consen 639 AHGTNPASAAMA-GMKVVPVGCDANG--NIDMVDLKAKAEKH---KDNLAALMVTYPST-HGVF--EEGIDDICDIIHEH 709 (1001)
T ss_pred ccCCChhhHHhc-CCEEEEeeccCCC--CccHHHHHHHHHHh---hhhhheeEEecccc-cccc--cccHHHHHHHHHhc
Confidence 666555555655 9999999998644 68999999887765 33677899998864 3443 34699999999999
Q ss_pred CeEEEeccccccccc--CCCCcccHHHhhhhccCCCCcEEEEecCCcccCCC----CceEEEEEeCCHHHHHHHHH----
Q 011801 224 NIHLVCDEIYAATVF--SSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLP----GFRVGIVYSFNDTVVNCGRK---- 293 (477)
Q Consensus 224 ~~~lI~De~y~~~~~--~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~----G~RvG~i~~~~~~i~~~~~~---- 293 (477)
|.-|..|.+-..-.. ..+... ..|..+. -++|+|..| |-.+|=|-. ++.+..++-.
T Consensus 710 GGQVYlDGANMNAqVGlc~pGd~-----------GaDV~HL--NLHKTFcIPHGGGGPg~gPIgV-K~HLapfLP~HpVv 775 (1001)
T KOG2040|consen 710 GGQVYLDGANMNAQVGLCRPGDI-----------GADVCHL--NLHKTFCIPHGGGGPGMGPIGV-KKHLAPFLPSHPVV 775 (1001)
T ss_pred CCEEEecCCCccceecccCCccc-----------cccceee--cccceeeecCCCCCCCCCccch-hhhccccCCCCCcc
Confidence 999999987643211 111111 1122222 566666433 222343322 1111111100
Q ss_pred ---------------hcccCCCch-HHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEE--
Q 011801 294 ---------------MSSFGLVSS-QTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLF-- 355 (477)
Q Consensus 294 ---------------~~~~~~vs~-~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~-- 355 (477)
..+|+..+. +..++-.+|+....+ +...+.-.-+..++.++|+.+---++....|+.
T Consensus 776 s~~~~~~~~~~gsVsaaP~Gsa~ILpISwaYikmMG~~GL-----~~as~~AiLNaNYMakRLe~hYkil~~~~~~~vaH 850 (1001)
T KOG2040|consen 776 SPGRPEDTSPVGSVSAAPWGSALILPISWAYIKMMGSGGL-----KDASKIAILNANYMAKRLESHYKILFRGENGLVAH 850 (1001)
T ss_pred CCCCCCCCCCccceeccCCCcceeehhHHHHHHHhccccc-----chhhHHHhhhhHHHHHHHhhccceeEecCCcceee
Confidence 012222111 233455566665543 222222233557788888876322233222221
Q ss_pred -EEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccC-CHHHHHHHHHHHHHHHhhhh
Q 011801 356 -FWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANM-DDDTLQVALNRIAAFVQQDK 428 (477)
Q Consensus 356 -~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~-~~e~l~~~l~~l~~~~~~~~ 428 (477)
+.++++++.+...++.. +..+++. ++|..- |--++. -+|.+=|-...- +.+++|++.+++-.+-++.+
T Consensus 851 EFIlD~r~fK~~agieav-DvAKRL~-DYgFHa-PTmswP--V~gtLMIEPTESE~k~ElDRfcdAliSIreEI~ 920 (1001)
T KOG2040|consen 851 EFILDLRPFKKTAGIEAV-DVAKRLM-DYGFHA-PTMSWP--VAGTLMIEPTESEDKAELDRFCDALISIREEIA 920 (1001)
T ss_pred eeeeechhhccccCCcHH-HHHHHHH-hccCCC-Cccccc--cCCceEeccCccccHHHHHHHHHHHHHHHHHHH
Confidence 34788877665655554 5666654 667754 333332 355554543322 56788888777766655443
No 390
>PRK12566 glycine dehydrogenase; Provisional
Probab=97.90 E-value=0.0026 Score=70.49 Aligned_cols=270 Identities=17% Similarity=0.206 Sum_probs=150.0
Q ss_pred HHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhc---CCCCeEEEcCCCccchHHHHhhhC---CcEEEE
Q 011801 89 PEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLA---NPGDAFLVPSPYYAAFDRDLSWRT---GVQIVP 162 (477)
Q Consensus 89 ~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~---~~Gd~vlv~~P~y~~~~~~~~~~~---g~~~~~ 162 (477)
-++...|++..+ .+-.|--+-.|+|.+-+.++.+.. +...+|+|+.-.+|.+...++.++ |++++.
T Consensus 127 ~e~Qtmi~~LtG--------m~vaNASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~ 198 (954)
T PRK12566 127 LNFQQMTIDLTG--------LDLANASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV 198 (954)
T ss_pred HHHHHHHHHHhC--------chhhhhhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE
Confidence 345555555544 333444454566665554443331 124689999999998877665432 555553
Q ss_pred EeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecc-cccccccCCC
Q 011801 163 VHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDE-IYAATVFSSP 241 (477)
Q Consensus 163 v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De-~y~~~~~~~~ 241 (477)
+++++.+. .++.+|++.+| |-.|.+-+ +++|.+.++++|.++|+-- .-+-.+...|
T Consensus 199 -------------~~~~~~~~------~~~~~v~vq~P-~~~G~i~d---~~~i~~~~h~~gal~~~~~d~laL~ll~~P 255 (954)
T PRK12566 199 -------------DAVDNLAA------HAVFGALLQYP-DTHGEIRD---LRPLIDQLHGQQALACVAADLLSLLVLTPP 255 (954)
T ss_pred -------------cchhhcCC------CCEEEEEEECC-CCceEEcc---HHHHHHHHHHcCCEEEEEeCHHHHhCCCCh
Confidence 22333221 26889999999 57888855 8899999999988766221 1111111111
Q ss_pred CcccHHHhhhhccCCCCcEEEEe---cCCcccCCCCceEEEEEeCCHHHHHHHHH-------------------------
Q 011801 242 KFTSVAEVIQEMDCNRDLIHIIY---SLSKDMGLPGFRVGIVYSFNDTVVNCGRK------------------------- 293 (477)
Q Consensus 242 ~~~s~~~~~~~~~~~~~~viiv~---SlSK~~g~~G~RvG~i~~~~~~i~~~~~~------------------------- 293 (477)
. ..+..|+++ +|.=-+|..|--.||+.+.++.+...--+
T Consensus 256 g-------------e~GADI~vG~~Q~fGvp~~~GGP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHI 322 (954)
T PRK12566 256 G-------------ELGADVVLGSTQRFGVPMGYGGPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHI 322 (954)
T ss_pred h-------------hcCCcEEeeCCCcCCCCCCCCCCCeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHh
Confidence 1 335556666 44455666677788988854322211000
Q ss_pred ----hcccCCCchHHHHHHH-HhcC--ChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEecCCceEEEEeeccchhhc
Q 011801 294 ----MSSFGLVSSQTQYLLA-SMLS--DDEFVDNFLVETSKRLAKRHHNFTKGLEQVGINCLKSNAGLFFWMDLRHLLKE 366 (477)
Q Consensus 294 ----~~~~~~vs~~~q~~~~-~~L~--~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~~~~~g~~~~~~l~~~~~~ 366 (477)
.++.. ++.++-.++. .+.. .+ .+-+++..++...+..++.+.|.+.|+++... .+|=-+.+.- ..
T Consensus 323 RReKAtSNI-CT~qaL~A~~a~~Y~~~~G---p~Gl~~ia~~~~~~a~~l~~~l~~~g~~~~~~--~fF~~~~v~~--~~ 394 (954)
T PRK12566 323 RREKANSNI-CTAQVLLANIAGFYAVYHG---PEGLKRIAQRVHRLTAILAAGLEAKGIKRLNR--HFFDTLTLEV--GG 394 (954)
T ss_pred hhccccchh-hHHHHHHHHHHHHHHHHhC---hHHHHHHHHHHHHHHHHHHHHHHhcCCccccC--CccceEEEEc--cC
Confidence 00111 1112111111 1110 11 22356777778888889999999999876533 3453333331 10
Q ss_pred cCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccC-CHHHHHHHHHHHH
Q 011801 367 KTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANM-DDDTLQVALNRIA 421 (477)
Q Consensus 367 ~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~-~~e~l~~~l~~l~ 421 (477)
...++.+..+ +.||+++-- .++.+.|++... ++++++.++..+.
T Consensus 395 ----~~~~~~~~a~-~~~~n~r~~------~~~~~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 395 ----AQAAIIESAE-AARINLRIL------GRGRLGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred ----CHHHHHHHHH-HCCCeeEEe------CCCeEEEEeCCCCCHHHHHHHHHHhc
Confidence 0113444444 458988742 245688888654 7889998888884
No 391
>PLN02672 methionine S-methyltransferase
Probab=97.59 E-value=0.0027 Score=71.68 Aligned_cols=205 Identities=15% Similarity=0.117 Sum_probs=133.6
Q ss_pred ccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHh------cCCCCeEEEcCCCccchHHHH
Q 011801 79 IAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCL------ANPGDAFLVPSPYYAAFDRDL 152 (477)
Q Consensus 79 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l------~~~Gd~vlv~~P~y~~~~~~~ 152 (477)
..-|.++.|...||..||.||+..++ +++.+++|++.+.-..|++.+++.+ ++.+.+-.+| ..+...+
T Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 492 (1082)
T PLN02672 419 YFPCEPPAGSKRFRNLIAGFMRIYHH--IPLTPDNVVVFPSRAVAIENALRLFSPRLAIVDEHLTRWLP----KKWLTSL 492 (1082)
T ss_pred CCCCCCCccchHHHHHHHHHHHHhcC--CcCCccceEEeccHHHHHHHHHHhhChHHHhhhhhhhccCC----HHHHhHh
Confidence 34577888999999999999999988 7789999999999999999888775 3333222222 1222222
Q ss_pred hhh-------CC--cEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc
Q 011801 153 SWR-------TG--VQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDK 223 (477)
Q Consensus 153 ~~~-------~g--~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~ 223 (477)
... .+ +.++.-|.. .+.+.+.+++. ++++|+..-. .+-..+....+.|++.+++-
T Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~-----~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 556 (1082)
T PLN02672 493 AIENATSDSKSDDVITVIEAPRQ--------SDLVIELIKKL-----KPQVVVTGMA---DFEMRTSTAFEHLLNVTAEI 556 (1082)
T ss_pred hhhcccccCccCCeEEEEeCCCc--------chHHHHHHHhC-----CCeEEEEecc---chhhhhHHHHHHHHHHHHhh
Confidence 222 01 222222221 23566777665 7887765422 24445666799999999999
Q ss_pred CeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHh--cccCCCc
Q 011801 224 NIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKM--SSFGLVS 301 (477)
Q Consensus 224 ~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~--~~~~~vs 301 (477)
|++++.|+.-.-..-+.+....+..++... ..+.+..+++.+-|.-=.+.+-+.++++-++.+...+.+. -.++..+
T Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (1082)
T PLN02672 557 GARLFLDISDHLELSSLPGSNGVLKYLAGH-PLPSHAAIICGLVKNQVYSDLEVAFVISENEAVLKALSKTGEVLEGRTA 635 (1082)
T ss_pred CcEEEEehhhheeeccCCCcccHHHHhcCC-CCCcchhHhhhhhhccccccceEEEEecCcHHHHHHHHHHHHhhccchH
Confidence 999999986542212233334444444321 1356667788898875569999999999888887766543 2344455
Q ss_pred hHHHH
Q 011801 302 SQTQY 306 (477)
Q Consensus 302 ~~~q~ 306 (477)
.++|+
T Consensus 636 ~~~~~ 640 (1082)
T PLN02672 636 IISQF 640 (1082)
T ss_pred HHHHH
Confidence 56665
No 392
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=97.49 E-value=0.017 Score=56.71 Aligned_cols=332 Identities=14% Similarity=0.119 Sum_probs=168.3
Q ss_pred cccccccccccccHHHHHHHHHhCCCCcccccccccccccccccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeC
Q 011801 39 GVIQLGLAENQLCFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGG 118 (477)
Q Consensus 39 ~~i~l~~~~n~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~ 118 (477)
.+.+||.+...++++.++..-+..-+ +...|.+.++-..+-.+ + .++-+...+-+.+..+ ++-+-+=+++-+
T Consensus 5 ~~~nFsaGPa~lp~~vL~~a~~e~~~---~~g~g~svme~SHRsk~--~-~~v~~~a~~~lreLl~--iPd~Y~VlflqG 76 (365)
T COG1932 5 RVYNFSAGPAALPPEVLQQAQKELLD---WNGLGMSVMEISHRSKE--F-KNVLEEAEKDLRELLN--IPDDYKVLFLQG 76 (365)
T ss_pred CCCCCCCCcccCCHHHHHHHHHHHhh---hccCCcceeeeccccHH--H-HHHHHHHHHHHHHHhC--CCCCceEEEEcC
Confidence 45788888887887766555433110 11112221111111111 1 2222222233333333 433333455566
Q ss_pred ChHHHHHHHHHHhcCCCCeEEEcCCCccchHHH-HhhhCCc--EEEEEeccCCCCcc--cCHHHHHHHHHHHHHhCCCee
Q 011801 119 GATGANELIMFCLANPGDAFLVPSPYYAAFDRD-LSWRTGV--QIVPVHCDISNNFK--ITREALEAAYERAQEASINIK 193 (477)
Q Consensus 119 G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~-~~~~~g~--~~~~v~~~~~~~f~--i~~~~l~~~~~~~~~~~~~~k 193 (477)
|+|+..+.+...|+....+-.+.+-+|..+... ++.. +. .+...... ..+|. ++++.++ +. .+..
T Consensus 77 Gat~qf~~~p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~-~~~~~~~~~~~~-~~~~~~iP~~~~~~--~~------~~~a 146 (365)
T COG1932 77 GATGQFAMAPMNLLGKRGTDYVDTGAWSEFAIKEAKKV-GKQPKLIDARIE-EAGYGSIPDLSKWD--FS------DNDA 146 (365)
T ss_pred ccHHHHHHHHHhhhcccCceeEeeeehhHhHHHHHHHh-ccccccccccee-ccCccCCCChhhcc--cC------CCcc
Confidence 799999999988876554313344445444321 2223 32 22222211 22222 2333222 11 1233
Q ss_pred EEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCC
Q 011801 194 GLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLP 273 (477)
Q Consensus 194 ~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~ 273 (477)
.|.+|.-..-+|+-++. ...+.. +.++|+|-.-.. +..+ +.+..+ + ++-.+.-|.+|..
T Consensus 147 yv~~~~NeTi~Gv~v~~--~p~~~~-----~~~~v~D~SS~i--lsr~--iDvsk~--------d--viyagaQKnlGpa 205 (365)
T COG1932 147 YVHFCWNETISGVEVPE--LPDIGS-----DGLLVADASSAI--LSRP--IDVSKY--------D--VIYAGAQKNLGPA 205 (365)
T ss_pred EEEEecCCcccceEccC--CCCCCC-----CceEEEecccHH--hcCC--CChhHc--------c--eEEEehhhccCcc
Confidence 46666545567877661 111111 278899987652 3322 333322 2 4557889999988
Q ss_pred CceEEEEEeCCHHHHHHHHH--------------hcccCCCchHHHHHHHH----hcCChhhHHHHHHHHHHHHHHHHHH
Q 011801 274 GFRVGIVYSFNDTVVNCGRK--------------MSSFGLVSSQTQYLLAS----MLSDDEFVDNFLVETSKRLAKRHHN 335 (477)
Q Consensus 274 G~RvG~i~~~~~~i~~~~~~--------------~~~~~~vs~~~q~~~~~----~L~~~~~~~~~~~~~~~~l~~r~~~ 335 (477)
| ++.++.+++.+...... -+.|.+.+.++-+.+.. +.+.+. ++...++-++..+.
T Consensus 206 G--ltvvIvr~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GG-----l~~~~~rn~~ka~~ 278 (365)
T COG1932 206 G--LTVVIVRPDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGG-----LEALEARNQAKAQL 278 (365)
T ss_pred c--eEEEEEcHHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCC-----HHHHHHHHHHHHHH
Confidence 8 88888877665443221 12234444454444332 223444 23444555666677
Q ss_pred HHHHHhhCCCe---Ee-cCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEecc-CCH
Q 011801 336 FTKGLEQVGIN---CL-KSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFAN-MDD 410 (477)
Q Consensus 336 l~~~L~~~gi~---~~-~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~-~~~ 410 (477)
|.+.+++.++- +. ...+-+-+.+++.. ..+ +..+.+.+. +.|+...-| +- -+|.+|+++-+ ++.
T Consensus 279 LY~~id~s~fy~~~v~~~~RS~mnV~f~~~~----~~l--d~~fv~eae-~~gl~~lkG---hr-~vgGmRasiynA~~~ 347 (365)
T COG1932 279 LYDWIDKSDFYRNLVAKANRSRMNVTFTLVD----AEL--DKGFVAEAE-AAGLIYLKG---HR-SVGGLRASIYNAVPL 347 (365)
T ss_pred HHHHHHhCCccccccchhhccceeEEEEcCc----HHH--HHHHHHHHH-HcCCceecc---cc-CCCceeeeeecCCCH
Confidence 88888776431 11 12233445555552 111 223555544 457777666 22 24459999966 599
Q ss_pred HHHHHHHHHHHHHHhhh
Q 011801 411 DTLQVALNRIAAFVQQD 427 (477)
Q Consensus 411 e~l~~~l~~l~~~~~~~ 427 (477)
|+++.+++-|+.|.+++
T Consensus 348 e~veaL~~fm~~f~~~~ 364 (365)
T COG1932 348 EDVEALTDFMDWFEETY 364 (365)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999888764
No 393
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=97.19 E-value=0.018 Score=53.89 Aligned_cols=254 Identities=18% Similarity=0.249 Sum_probs=127.1
Q ss_pred CcEEEEEe-ccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccc
Q 011801 157 GVQIVPVH-CDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAA 235 (477)
Q Consensus 157 g~~~~~v~-~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~ 235 (477)
|.+.+-+. +-..+...-|+++++..+++. | ...|+........=..-+++.+++|..+|..|++.-|+..+|.
T Consensus 124 gfepiiie~i~d~d~l~tdleav~~~iee~---g--~dcilci~sttscfapr~pd~leaiaaica~~diphivnnayg- 197 (432)
T KOG3843|consen 124 GFEPIIIENILDGDELITDLEAVEAIIEEL---G--EDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYG- 197 (432)
T ss_pred CCCceeeeccccchHHHHhHHHHHHHHHHh---C--CceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhccccc-
Confidence 88766554 223344555788888887764 3 3333322211111122356789999999999999999999997
Q ss_pred cccCCCC-cccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhcccCCCchHHHHHHHHhcCC
Q 011801 236 TVFSSPK-FTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGLVSSQTQYLLASMLSD 314 (477)
Q Consensus 236 ~~~~~~~-~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~~~~~vs~~~q~~~~~~L~~ 314 (477)
..... ..-++...+ ......++.|+-|.|-.| ..-+.|.+.++..++...++.+....++++..++..+|..
T Consensus 198 --lqsee~i~~iaa~~~----~grida~vqsldknf~vp-vggaiia~fk~n~iq~iak~ypgrasa~ps~dllitll~~ 270 (432)
T KOG3843|consen 198 --LQSEECIHKIAAAAE----CGRIDAFVQSLDKNFMVP-VGGAIIAAFKDNFIQEIAKMYPGRASASPSLDLLITLLSL 270 (432)
T ss_pred --cchHHHHHHHHHHhh----hccHHHHHHHhhhcceee-cchhHhhHhHHHHHHHHHHhCCCccccCccHHHHHHHHHh
Confidence 33222 122222111 112235678999999655 1222344456666666666655544455566666666654
Q ss_pred h--hhHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEe-cCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCe---EEe
Q 011801 315 D--EFVDNFLVETSKRLAKRHHNFTKGLEQVGINCL-KSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKL---NVS 388 (477)
Q Consensus 315 ~--~~~~~~~~~~~~~l~~r~~~l~~~L~~~gi~~~-~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI---~v~ 388 (477)
+ .| .+.+.+..+-....+..+.+.-+..|-.++ .|+.....-+.+......+ +....++-.++-..|| .|.
T Consensus 271 gqn~f-~e~~~eqkemf~~l~~ki~~~ae~~~e~l~~~p~n~is~amtl~ti~~~k--~kavt~~gsilfak~isgarvv 347 (432)
T KOG3843|consen 271 GQNAF-KELFGEQKEMFLKLRNKIIKFAEAIGECLLETPENEISLAMTLKTIDEAK--DKAVTLFGSILFAKGISGARVV 347 (432)
T ss_pred chhHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCchhhhhhhhccCChHH--hhHHHHHHHHHHhccccCceEe
Confidence 3 33 223333333333333444444444442111 2222222333333221111 1111233344444454 344
Q ss_pred CCCCCCCCCC----------------CEEEEEe-ccCCHHHHHHHHHHHHHHHhh
Q 011801 389 PGSSFQCTEP----------------GWFRVCF-ANMDDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 389 pg~~f~~~~~----------------~~~Rl~~-~~~~~e~l~~~l~~l~~~~~~ 426 (477)
|.+.....-+ +++-... -.|++.++++++.||.+.+..
T Consensus 348 ~~~q~kttieg~ef~~f~sht~e~~~~yln~a~aigm~~hdld~~~~rl~~~~a~ 402 (432)
T KOG3843|consen 348 PLGQMKTTIEGCEFIGFGSHTNEQHCAYLNAACAIGMKDHDLDEFFNRLDRCLAA 402 (432)
T ss_pred eccccceeeeceEEeccccccCcCchhHhhHHHhcCCcHhHHHHHHHHHHHHHHH
Confidence 4433211101 2333322 125788999999999877654
No 394
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=96.68 E-value=0.2 Score=48.06 Aligned_cols=303 Identities=12% Similarity=0.108 Sum_probs=166.9
Q ss_pred CcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCC---eEEEcCCCccc----hHHHHhhhCCcE
Q 011801 87 GLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGD---AFLVPSPYYAA----FDRDLSWRTGVQ 159 (477)
Q Consensus 87 G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd---~vlv~~P~y~~----~~~~~~~~~g~~ 159 (477)
+-......++...+ ...++|.+.+.-|--++.++..|.+|-. +||++.-.||. +...++.. |..
T Consensus 112 ~De~il~l~~~iVG--------A~e~EvavmNsLTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lh-G~~ 182 (465)
T KOG3846|consen 112 IDEPILPLLAPIVG--------AQENEVAVMNSLTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLH-GIS 182 (465)
T ss_pred cchhhhhhhhhhcc--------CCchhhhhHhhhhhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhc-CCC
Confidence 33444445555544 5567899999999999999999988864 68888877765 33444544 554
Q ss_pred E--EEEeccC-CCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEeccccccc
Q 011801 160 I--VPVHCDI-SNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAAT 236 (477)
Q Consensus 160 ~--~~v~~~~-~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~ 236 (477)
+ ..+.+.+ ++.-.+..+++.+.+++ .+..+.+|++.--+.-||+.++ +.+|-..-+.+|++|=.|-+++
T Consensus 183 ~e~sm~~iePREGEetlRteDILd~IEk---ngDeiA~v~fSGvqyYTGQ~Fd---i~aIT~Agq~kgc~VGfDLAHA-- 254 (465)
T KOG3846|consen 183 PENSMIQIEPREGEETLRTEDILDTIEK---NGDEIALVCFSGVQYYTGQYFD---IGAITFAGQFKGCLVGFDLAHA-- 254 (465)
T ss_pred hHHheEEecccccccchhHHHHHHHHHh---cCCeEEEEEeecceeecccccc---hhhhhhcccCCCcEechhhhhh--
Confidence 2 1122221 23334566777777664 4567777788888899999999 6777665567899998998887
Q ss_pred ccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCCCceEEEEEeCCHHHHHHHHHhcccCC-----------------
Q 011801 237 VFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLPGFRVGIVYSFNDTVVNCGRKMSSFGL----------------- 299 (477)
Q Consensus 237 ~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~G~RvG~i~~~~~~i~~~~~~~~~~~~----------------- 299 (477)
++.-+.. +. .++..+.++.--|.+....-.+|-+....+.......++..+|.
T Consensus 255 -vgNVpL~-----LH----dWgVDFACWCSYKYlnaGaGgIgGlFvHekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lip 324 (465)
T KOG3846|consen 255 -VGNVPLQ-----LH----DWGVDFACWCSYKYLNAGAGGIGGLFVHEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIP 324 (465)
T ss_pred -hcCCceE-----Ee----ecCCceEEEeeecccccCCCccceeeeehhhhcchhhHHhhhccCCcchhhhhccccccCc
Confidence 5443311 11 45666677776787642223466666655544433333332221
Q ss_pred ------CchHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHHHhhC-----CCeEecCCceEEEEeeccchhhcc-
Q 011801 300 ------VSSQTQYLLASMLSDDEFVDNFLVETSKRLAKRHHNFTKGLEQV-----GINCLKSNAGLFFWMDLRHLLKEK- 367 (477)
Q Consensus 300 ------vs~~~q~~~~~~L~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~-----gi~~~~~~~g~~~~~~l~~~~~~~- 367 (477)
.|.+......++.+.-+. +.+...+.+++|.-.++.-|+.+ |........-+|+.+-.|......
T Consensus 325 Ga~GfRiSNPpi~~v~al~~SLe~---F~q~~~~~lRkrS~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erG 401 (465)
T KOG3846|consen 325 GALGFRISNPPIIDVVALRSSLEL---FAQFNINELRKRSLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERG 401 (465)
T ss_pred cccccccCCCcHhHHHHHHhhHHH---HHHhhHHHHhhhhhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCccccccc
Confidence 222222333344443222 22333444555544444433321 211000001122222222111100
Q ss_pred -----CchHH-HHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccC--CHHHHHHHHHHHHHHHhh
Q 011801 368 -----TLEGE-IALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANM--DDDTLQVALNRIAAFVQQ 426 (477)
Q Consensus 368 -----~~~~e-~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~--~~e~l~~~l~~l~~~~~~ 426 (477)
.|... ...+.. +.++|+..- ...|+.+|+...-+ +-.++..++..|.+++..
T Consensus 402 cQLsl~Fssp~~~vfqe-L~krGv~~D------kR~PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d~ 461 (465)
T KOG3846|consen 402 CQLSLYFSSPTPKVFQE-LHKRGVIGD------KRRPNVIRVAPVPLYNTFSDVYIFVNALNEAMDK 461 (465)
T ss_pred ceEEEEeCCCchHHHHH-HHHcCeecc------ccCCCceEeecchhhccHHHHHHHHHHHHHHHHH
Confidence 00000 123344 446688652 23578899987543 668899999999988865
No 395
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=95.84 E-value=0.38 Score=45.76 Aligned_cols=334 Identities=14% Similarity=0.135 Sum_probs=171.9
Q ss_pred CccccccccccccccHHHHHHHHHhCCCCcccccccccccccccccCCCC-CcHHHHHHHHHHHhcccCCCCccCCCcEE
Q 011801 37 PGGVIQLGLAENQLCFDLIKDWITKNPYASICTAEGVEVFKDIAIFQDYH-GLPEFRQAVAKFMGKGRGGRVTFDPDRIV 115 (477)
Q Consensus 37 ~~~~i~l~~~~n~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~-G~~~lr~aia~~~~~~~g~~~~~~~~~i~ 115 (477)
|..+|+|+.+.-.+|.+.+.+.-++.- .+..-|++..+-..+=.+.. -+.+-...+.+.++ ++-.-+-++
T Consensus 5 ~~~vvnFaaGPAklp~~VL~e~qkdl~---n~~g~GisV~EmSHRsk~f~kii~~tes~lreLln------iPdn~~vlf 75 (370)
T KOG2790|consen 5 PERVVNFAAGPAKLPESVLLEAQKDLL---NFNGSGISVMEMSHRSKDFAKIINDTESLLRELLN------IPDNYKVLF 75 (370)
T ss_pred ccceeecCCCcccCCHHHHHHHHHHhh---ccCCCcceEEEecccchhHHHHHHHHHHHHHHHHc------CCCceeEEE
Confidence 667899999988888877777655421 13333333221111111110 12223333444443 332233466
Q ss_pred EeCChHHHHHHHHHHhc--CCC---CeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCc--ccCHHHHHHHHHHHHHh
Q 011801 116 MGGGATGANELIMFCLA--NPG---DAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNF--KITREALEAAYERAQEA 188 (477)
Q Consensus 116 ~t~G~t~al~~i~~~l~--~~G---d~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f--~i~~~~l~~~~~~~~~~ 188 (477)
+-.|+|+-...+...|+ +.| |.|+.-.++--.+.++-+.- ....+..+..+- .| -+|.+.++.
T Consensus 76 ~QGGGt~qFaAv~lNL~glK~g~~AdYiVTGsWS~KA~~EAkk~~-~~~~V~~~~k~y-~ygkvPd~~~w~~-------- 145 (370)
T KOG2790|consen 76 LQGGGTGQFAAVPLNLIGLKHGRCADYVVTGSWSAKAAEEAKKYG-TPNIVIPKLKSY-TYGKVPDPSTWEL-------- 145 (370)
T ss_pred EeCCCcccccccchhhhccccCCccceEEeccccHHHHHHHHhhC-CceEEecccccc-ccCcCCChhhccc--------
Confidence 67778877777766665 444 67777776665666654422 333443333221 11 123333332
Q ss_pred CCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCc
Q 011801 189 SINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSK 268 (477)
Q Consensus 189 ~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK 268 (477)
+++-+.|++|.--.--|.-++.-. .-.-++..+|+|-.-- |-..+ ..+. ..-++....-|
T Consensus 146 ~~da~yvyyCaNETVHGVEf~~~P------~~~~~~~vlVaDmSSn---flSrp-vDvs----------k~gvi~aGAQK 205 (370)
T KOG2790|consen 146 NPDASYVYYCANETVHGVEFDFIP------VNDPKGAVLVADMSSN---FLSRP-VDVS----------KFGVIFAGAQK 205 (370)
T ss_pred CCCccEEEEecCceeeceecCCCC------CCCCCCceEEEecccc---hhcCC-ccch----------hcceEEecccc
Confidence 446667888755455566554211 1124688889987654 44443 2222 22255678899
Q ss_pred ccCCCCceEEEEEeCCHHHHHHHHH-------------hcccCCCchHHH----HHHHHhcCChhhHHHHHHHHHHHHHH
Q 011801 269 DMGLPGFRVGIVYSFNDTVVNCGRK-------------MSSFGLVSSQTQ----YLLASMLSDDEFVDNFLVETSKRLAK 331 (477)
Q Consensus 269 ~~g~~G~RvG~i~~~~~~i~~~~~~-------------~~~~~~vs~~~q----~~~~~~L~~~~~~~~~~~~~~~~l~~ 331 (477)
.+|.+|+- .++..++.+-..... -+-|.+.+.++. ..+..+++.+.. +...+.-.+
T Consensus 206 N~G~aG~T--vvivr~dllg~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl-----~a~e~~n~~ 278 (370)
T KOG2790|consen 206 NVGPAGVT--VVIVRKDLLGNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGL-----AAMEKLNQE 278 (370)
T ss_pred ccCccccE--EEEEehhhhcccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHHhcccH-----HHHHHHHHH
Confidence 99988844 444444433222111 012233332222 234555566653 333444455
Q ss_pred HHHHHHHHHhhC-CCeEec--C--CceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEec
Q 011801 332 RHHNFTKGLEQV-GINCLK--S--NAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFA 406 (477)
Q Consensus 332 r~~~l~~~L~~~-gi~~~~--~--~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~ 406 (477)
..+.+.+.+.+. |+-..+ + .+-+-+-+++.+ . +-|.+|.+...++ +..-.-|. ..-|.+|-++=
T Consensus 279 KskllYd~iD~s~gfy~cpVe~~~RS~MNV~Fri~~----d--~Le~eFLkeA~~~-~mv~LKGh----RSVGGiRASlY 347 (370)
T KOG2790|consen 279 KSKLLYDAIDNSNGFYRCPVEPSVRSRMNVPFRIEK----D--ELEAEFLKEAAKE-HMVQLKGH----RSVGGIRASLY 347 (370)
T ss_pred HHHHHHHHHHhcCCeEEcccchhhhhhcccceeecc----h--HHHHHHHHHHHHh-hhhccccc----cccccchhhhh
Confidence 667788888775 532211 1 111222233331 1 2234566666655 33322332 12456999996
Q ss_pred c-CCHHHHHHHHHHHHHHHhhh
Q 011801 407 N-MDDDTLQVALNRIAAFVQQD 427 (477)
Q Consensus 407 ~-~~~e~l~~~l~~l~~~~~~~ 427 (477)
+ ++-++.+.+++-+++|.+.+
T Consensus 348 NAisv~~~q~L~~~m~~F~k~h 369 (370)
T KOG2790|consen 348 NAISVEEVQKLAAFMKEFQKKH 369 (370)
T ss_pred ccccHHHHHHHHHHHHHHHHhc
Confidence 5 48899999999998887653
No 396
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=95.04 E-value=2.1 Score=45.42 Aligned_cols=244 Identities=16% Similarity=0.148 Sum_probs=124.1
Q ss_pred cCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHH
Q 011801 132 ANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRD 211 (477)
Q Consensus 132 ~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~ 211 (477)
...+.++++..-+|+.....++.++ +...+.++- .|+ +++... ...+.++++-.| +--|.+.+
T Consensus 202 ~~krkk~vvd~~~hpqtlsV~~TRa--~~~~i~v~~-----~~~---~~~~~s----~~~v~gvlvQYP-~t~G~i~d-- 264 (1001)
T KOG2040|consen 202 INKRKKFVVDSNCHPQTLSVVKTRA--KGFGIKVVV-----SDI---KEADYS----SKDVSGVLVQYP-DTEGSVLD-- 264 (1001)
T ss_pred hcccceEEecCCCCcchhhhhhccc--cccceeEEe-----cCH---HHhhcc----ccceeEEEEEcC-CCCCcccC--
Confidence 3456779999999998887776543 222121111 122 222111 236888888877 55788888
Q ss_pred HHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEecCCcccCCC----CceEEEEEeC----
Q 011801 212 TLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYSLSKDMGLP----GFRVGIVYSF---- 283 (477)
Q Consensus 212 ~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~SlSK~~g~~----G~RvG~i~~~---- 283 (477)
..++++.++..+.++++-.--..+..-.++ . ..+..|.++|- --||+| |--.||..+.
T Consensus 265 -~~el~~~a~~~~s~vv~atDLLaLtiLrpP----g--------efGaDIavGSs-QRFGVPlGYGGPHAaFfAv~~~l~ 330 (1001)
T KOG2040|consen 265 -FDELVELAHANGSLVVMATDLLALTILRPP----G--------EFGADIAVGSS-QRFGVPLGYGGPHAAFFAVSESLV 330 (1001)
T ss_pred -HHHHHHHhhccCceEEEeehhhHHHccCCh----h--------hcCceeeeccc-cccCccccCCCchHHHHHHHHHHH
Confidence 555666666888777653322212111111 0 23455666663 334433 1111111110
Q ss_pred ----------------CHHHHHHHHHh-----cccCCCch-HHHHHHHHhcCChhhH--HHHHHHHHHHHHHHHHHHHHH
Q 011801 284 ----------------NDTVVNCGRKM-----SSFGLVSS-QTQYLLASMLSDDEFV--DNFLVETSKRLAKRHHNFTKG 339 (477)
Q Consensus 284 ----------------~~~i~~~~~~~-----~~~~~vs~-~~q~~~~~~L~~~~~~--~~~~~~~~~~l~~r~~~l~~~ 339 (477)
++...-++... +.-.+.+. .+|++++.|-.-.... .+-+++..+++......|..+
T Consensus 331 R~mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKATSNICTAQALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~ 410 (1001)
T KOG2040|consen 331 RMMPGRIIGVTKDALGKEAYRLALQTREQHIRRDKATSNICTAQALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEG 410 (1001)
T ss_pred hhCCCceEeeeecccccHHHHHHHHHHHHHhhhhccchhhhHHHHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHH
Confidence 11111111100 11111121 3455554443211100 234667777777777888889
Q ss_pred HhhCCCeEecCCceEEEEeeccchhhccCchHHHHHHHHHHHhcCeEEeCCCCCCCCCCCEEEEEeccC-CHHHHHHHHH
Q 011801 340 LEQVGINCLKSNAGLFFWMDLRHLLKEKTLEGEIALWRTIVNDVKLNVSPGSSFQCTEPGWFRVCFANM-DDDTLQVALN 418 (477)
Q Consensus 340 L~~~gi~~~~~~~g~~~~~~l~~~~~~~~~~~e~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Rl~~~~~-~~e~l~~~l~ 418 (477)
|+..|-++.. -.||=.++++-... ..++..+.+++ +|+++- -+++.+=+++-.. ++++++.++.
T Consensus 411 l~~aghel~~--k~fFDTLkI~~~~s------~~~~l~rA~~~-~iNlr~------~ed~tigvslDETv~~~DvddLl~ 475 (1001)
T KOG2040|consen 411 LKNAGHELQH--KPFFDTLKIRCGCS------AEEVLDRAAKR-QINLRL------VEDGTIGVSLDETVTEKDVDDLLW 475 (1001)
T ss_pred Hhhcchhhcc--ccccceEEEEecCc------HHHHHHHHHhh-cCceEE------eecCceEEeecccccHHHHHHHHH
Confidence 9888754432 22565555542211 11355555544 677652 2466677777543 7888888888
Q ss_pred HHH
Q 011801 419 RIA 421 (477)
Q Consensus 419 ~l~ 421 (477)
.+.
T Consensus 476 vf~ 478 (1001)
T KOG2040|consen 476 VFN 478 (1001)
T ss_pred HHc
Confidence 775
No 397
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=88.07 E-value=7.6 Score=37.65 Aligned_cols=140 Identities=18% Similarity=0.289 Sum_probs=84.1
Q ss_pred cCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchH---HHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHH
Q 011801 109 FDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFD---RDLSWRTGVQIVPVHCDISNNFKITREALEAAYERA 185 (477)
Q Consensus 109 ~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~---~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~ 185 (477)
+..+-+++|+|+.+.=..+..-|++.|-++++-+-.=.+.. +.++.. | ++..+.||-+ +.+++.+..++.
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~-g-~~~~y~cdis-----~~eei~~~a~~V 108 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI-G-EAKAYTCDIS-----DREEIYRLAKKV 108 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc-C-ceeEEEecCC-----CHHHHHHHHHHH
Confidence 45567888888888878888889999987766554433333 333333 5 6666777643 467777777766
Q ss_pred HHhCCCeeEEEEeCCC---CCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhcc-CCCCcEE
Q 011801 186 QEASINIKGLIITNPS---NPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMD-CNRDLIH 261 (477)
Q Consensus 186 ~~~~~~~k~vii~nP~---NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~-~~~~~vi 261 (477)
+++.+.+. |+++|.. .-...-.+.+++++..++ |+ .+ .|....++++.+- .+.+.++
T Consensus 109 k~e~G~V~-ILVNNAGI~~~~~ll~~~d~ei~k~~~v----N~-------~~-------~f~t~kaFLP~M~~~~~GHIV 169 (300)
T KOG1201|consen 109 KKEVGDVD-ILVNNAGIVTGKKLLDCSDEEIQKTFDV----NT-------IA-------HFWTTKAFLPKMLENNNGHIV 169 (300)
T ss_pred HHhcCCce-EEEeccccccCCCccCCCHHHHHHHHHH----hh-------HH-------HHHHHHHHhHHHHhcCCceEE
Confidence 66666776 5777763 233344688888888774 22 11 1223333333221 1456666
Q ss_pred EEecCCcccCCCC
Q 011801 262 IIYSLSKDMGLPG 274 (477)
Q Consensus 262 iv~SlSK~~g~~G 274 (477)
.+.|..=-+|.+|
T Consensus 170 ~IaS~aG~~g~~g 182 (300)
T KOG1201|consen 170 TIASVAGLFGPAG 182 (300)
T ss_pred EehhhhcccCCcc
Confidence 6777655566554
No 398
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=84.43 E-value=14 Score=32.12 Aligned_cols=100 Identities=20% Similarity=0.297 Sum_probs=61.6
Q ss_pred EEEeCChHHHHHHHHHHhcCCCC-eEEEcCCC--ccchH---HHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHH
Q 011801 114 IVMGGGATGANELIMFCLANPGD-AFLVPSPY--YAAFD---RDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQE 187 (477)
Q Consensus 114 i~~t~G~t~al~~i~~~l~~~Gd-~vlv~~P~--y~~~~---~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~ 187 (477)
+++|+|+++.=..+...|+..|+ .|++.... ..... ..++.. +.++..+++|-. +.+.+++.+++..+
T Consensus 3 ~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~-~~~~~~~~~D~~-----~~~~~~~~~~~~~~ 76 (167)
T PF00106_consen 3 VLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAP-GAKITFIECDLS-----DPESIRALIEEVIK 76 (167)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHT-TSEEEEEESETT-----SHHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccc-cccccccccccc-----cccccccccccccc
Confidence 56666665555556666777765 44544444 23222 223434 788888888743 57888888888776
Q ss_pred hCCCeeEEEEeCCCCCcccC--CCHHHHHHHHHH
Q 011801 188 ASINIKGLIITNPSNPLGTT--LDRDTLKSLVSF 219 (477)
Q Consensus 188 ~~~~~k~vii~nP~NPtG~~--~~~~~l~~l~~~ 219 (477)
....+..++.+....+.+.. ++.+++++..+.
T Consensus 77 ~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~ 110 (167)
T PF00106_consen 77 RFGPLDILINNAGIFSDGSLDDLSEEELERVFRV 110 (167)
T ss_dssp HHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccchhhhhcccc
Confidence 66788877766554444433 345666666553
No 399
>PRK08265 short chain dehydrogenase; Provisional
Probab=81.47 E-value=25 Score=33.33 Aligned_cols=100 Identities=15% Similarity=0.044 Sum_probs=55.3
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCC
Q 011801 112 DRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASIN 191 (477)
Q Consensus 112 ~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~ 191 (477)
..+++|.|+...=..+...|++.|-.|++..-.-.......... +.++..+++|-. +.+++++++++..+...+
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dl~-----~~~~~~~~~~~~~~~~g~ 80 (261)
T PRK08265 7 KVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL-GERARFIATDIT-----DDAAIERAVATVVARFGR 80 (261)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCeeEEEEecCC-----CHHHHHHHHHHHHHHhCC
Confidence 45677766555445555677788988877654333233333333 556666666642 467777777766555456
Q ss_pred eeEEEEeCCC-CCcccCCCHHHHHHHH
Q 011801 192 IKGLIITNPS-NPLGTTLDRDTLKSLV 217 (477)
Q Consensus 192 ~k~vii~nP~-NPtG~~~~~~~l~~l~ 217 (477)
+.+++.+-.. .+.+...+.+++++..
T Consensus 81 id~lv~~ag~~~~~~~~~~~~~~~~~~ 107 (261)
T PRK08265 81 VDILVNLACTYLDDGLASSRADWLAAL 107 (261)
T ss_pred CCEEEECCCCCCCCcCcCCHHHHHHHH
Confidence 7765443221 1222334545555443
No 400
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=81.04 E-value=18 Score=33.49 Aligned_cols=99 Identities=15% Similarity=0.258 Sum_probs=63.1
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCe---EEEcCCC----c-------cchHHHHhhhCCcEEEEEeccCCCCcccCHHHHH
Q 011801 114 IVMGGGATGANELIMFCLANPGDA---FLVPSPY----Y-------AAFDRDLSWRTGVQIVPVHCDISNNFKITREALE 179 (477)
Q Consensus 114 i~~t~G~t~al~~i~~~l~~~Gd~---vlv~~P~----y-------~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~ 179 (477)
+.+-+|+-....++..++ +.|.. ++...|. | ......++. .|+.++...... ...-..++|.
T Consensus 4 ~aL~SGGKDS~~Al~~a~-~~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~-~gi~l~~~~~~g--~~e~eve~L~ 79 (223)
T COG2102 4 IALYSGGKDSFYALYLAL-EEGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEA-MGIPLVTFDTSG--EEEREVEELK 79 (223)
T ss_pred EEEEecCcHHHHHHHHHH-HcCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHh-cCCceEEEecCc--cchhhHHHHH
Confidence 566777777777776665 33421 1111111 1 111122333 388877777542 2344678888
Q ss_pred HHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEE
Q 011801 180 AAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLV 228 (477)
Q Consensus 180 ~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI 228 (477)
++++.. ++.+|+ +|.+++..++..+-.+|++.|+.++
T Consensus 80 ~~l~~l-----~~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~~ 116 (223)
T COG2102 80 EALRRL-----KVDGIV-------AGAIASEYQKERVERLCEELGLKVY 116 (223)
T ss_pred HHHHhC-----cccEEE-------EchhhhHHHHHHHHHHHHHhCCEEe
Confidence 888754 556666 6999999999999999999998654
No 401
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=79.20 E-value=12 Score=34.91 Aligned_cols=96 Identities=16% Similarity=0.242 Sum_probs=53.2
Q ss_pred EEEeCC-hHHHHHHHHHHhcCCCCeEE-EcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCC
Q 011801 114 IVMGGG-ATGANELIMFCLANPGDAFL-VPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASIN 191 (477)
Q Consensus 114 i~~t~G-~t~al~~i~~~l~~~Gd~vl-v~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~ 191 (477)
|+++++ +..+-. ++..|.+++-.|. +..+.-......++.. |++++..+++ |.+.|.++++ .
T Consensus 1 I~V~GatG~~G~~-v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~-g~~vv~~d~~-------~~~~l~~al~-------g 64 (233)
T PF05368_consen 1 ILVTGATGNQGRS-VVRALLSAGFSVRALVRDPSSDRAQQLQAL-GAEVVEADYD-------DPESLVAALK-------G 64 (233)
T ss_dssp EEEETTTSHHHHH-HHHHHHHTTGCEEEEESSSHHHHHHHHHHT-TTEEEES-TT--------HHHHHHHHT-------T
T ss_pred CEEECCccHHHHH-HHHHHHhCCCCcEEEEeccchhhhhhhhcc-cceEeecccC-------CHHHHHHHHc-------C
Confidence 344443 333433 3344444654443 3443322223334445 9988755543 6888988887 5
Q ss_pred eeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEE
Q 011801 192 IKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLV 228 (477)
Q Consensus 192 ~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI 228 (477)
+..|+++-|... .-..+.-+.+++.|.+.|+-.+
T Consensus 65 ~d~v~~~~~~~~---~~~~~~~~~li~Aa~~agVk~~ 98 (233)
T PF05368_consen 65 VDAVFSVTPPSH---PSELEQQKNLIDAAKAAGVKHF 98 (233)
T ss_dssp CSEEEEESSCSC---CCHHHHHHHHHHHHHHHT-SEE
T ss_pred CceEEeecCcch---hhhhhhhhhHHHhhhccccceE
Confidence 667777666443 3334567889999998887444
No 402
>PRK04296 thymidine kinase; Provisional
Probab=77.15 E-value=37 Score=30.71 Aligned_cols=123 Identities=15% Similarity=0.201 Sum_probs=68.6
Q ss_pred hHHHHHHHHHHhcCCCCeEEEcCCCccc---hHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEE
Q 011801 120 ATGANELIMFCLANPGDAFLVPSPYYAA---FDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLI 196 (477)
Q Consensus 120 ~t~al~~i~~~l~~~Gd~vlv~~P~y~~---~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vi 196 (477)
+|.++..+.++. ..|..|++..|.+.. ....+... |.++..+... ..+++.+.+.+ ...++.+|+
T Consensus 16 TT~~l~~~~~~~-~~g~~v~i~k~~~d~~~~~~~i~~~l-g~~~~~~~~~-------~~~~~~~~~~~---~~~~~dvvi 83 (190)
T PRK04296 16 STELLQRAYNYE-ERGMKVLVFKPAIDDRYGEGKVVSRI-GLSREAIPVS-------SDTDIFELIEE---EGEKIDCVL 83 (190)
T ss_pred HHHHHHHHHHHH-HcCCeEEEEeccccccccCCcEecCC-CCcccceEeC-------ChHHHHHHHHh---hCCCCCEEE
Confidence 456666665554 568888887764332 22223333 5433322211 23334333333 223566777
Q ss_pred EeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHHhhhhccCCCCcEEEEec
Q 011801 197 ITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAEVIQEMDCNRDLIHIIYS 265 (477)
Q Consensus 197 i~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~~~~~~~~~~~~viiv~S 265 (477)
+..- ..++.+++.++++.++..|+.+|+=.-..+ |.+..|.....++. ..|.+.-+.+
T Consensus 84 IDEa-----q~l~~~~v~~l~~~l~~~g~~vi~tgl~~~--~~~~~f~~~~~L~~----~aD~V~~l~~ 141 (190)
T PRK04296 84 IDEA-----QFLDKEQVVQLAEVLDDLGIPVICYGLDTD--FRGEPFEGSPYLLA----LADKVTELKA 141 (190)
T ss_pred EEcc-----ccCCHHHHHHHHHHHHHcCCeEEEEecCcc--cccCcCchHHHHHH----hcCeEEEeeE
Confidence 7654 457788888999998889988887554443 44555555555554 3455555543
No 403
>PRK07063 short chain dehydrogenase; Provisional
Probab=75.79 E-value=45 Score=31.33 Aligned_cols=83 Identities=22% Similarity=0.237 Sum_probs=48.0
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhh----CCcEEEEEeccCCCCcccCHHHHHHHHHHHH
Q 011801 111 PDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWR----TGVQIVPVHCDISNNFKITREALEAAYERAQ 186 (477)
Q Consensus 111 ~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~----~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~ 186 (477)
...+++|+|+...=..+...|++.|..|++..-.-.......... .+.++..+.+|-. +.+++++++++..
T Consensus 7 ~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~ 81 (260)
T PRK07063 7 GKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVT-----DAASVAAAVAAAE 81 (260)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCC-----CHHHHHHHHHHHH
Confidence 345777776655555566778888988877654322222222111 1556666776642 4677777777655
Q ss_pred HhCCCeeEEEEe
Q 011801 187 EASINIKGLIIT 198 (477)
Q Consensus 187 ~~~~~~k~vii~ 198 (477)
+...++.+++.+
T Consensus 82 ~~~g~id~li~~ 93 (260)
T PRK07063 82 EAFGPLDVLVNN 93 (260)
T ss_pred HHhCCCcEEEEC
Confidence 544567765543
No 404
>PRK05872 short chain dehydrogenase; Provisional
Probab=75.43 E-value=41 Score=32.59 Aligned_cols=84 Identities=19% Similarity=0.142 Sum_probs=50.2
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhh-CCcEEEEEeccCCCCcccCHHHHHHHHHHHHHh
Q 011801 110 DPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWR-TGVQIVPVHCDISNNFKITREALEAAYERAQEA 188 (477)
Q Consensus 110 ~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~-~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~ 188 (477)
+...+++|+|+.+.=..+...|.+.|..|++..-.-.......... .+.++..+.+|-. |.+++++++++..+.
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~ 82 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVT-----DLAAMQAAAEEAVER 82 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCC-----CHHHHHHHHHHHHHH
Confidence 3456777777665555666778888988887665433333222222 1345666666532 577888887766555
Q ss_pred CCCeeEEEEe
Q 011801 189 SINIKGLIIT 198 (477)
Q Consensus 189 ~~~~k~vii~ 198 (477)
..++.+|+.+
T Consensus 83 ~g~id~vI~n 92 (296)
T PRK05872 83 FGGIDVVVAN 92 (296)
T ss_pred cCCCCEEEEC
Confidence 4567765533
No 405
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=74.57 E-value=51 Score=30.43 Aligned_cols=83 Identities=14% Similarity=0.151 Sum_probs=47.1
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCC
Q 011801 112 DRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASIN 191 (477)
Q Consensus 112 ~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~ 191 (477)
..+++|.|+...=..+...|++.|..|.+............... +.++..+++|-. +.+.+++++++..+.-.+
T Consensus 7 ~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~~~ 80 (245)
T PRK12936 7 RKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL-GERVKIFPANLS-----DRDEVKALGQKAEADLEG 80 (245)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-CCceEEEEccCC-----CHHHHHHHHHHHHHHcCC
Confidence 35666665554445566777888887776554433333322222 444555555432 467777777765554456
Q ss_pred eeEEEEeCC
Q 011801 192 IKGLIITNP 200 (477)
Q Consensus 192 ~k~vii~nP 200 (477)
+.+|+.+..
T Consensus 81 id~vi~~ag 89 (245)
T PRK12936 81 VDILVNNAG 89 (245)
T ss_pred CCEEEECCC
Confidence 777665543
No 406
>PRK06483 dihydromonapterin reductase; Provisional
Probab=74.30 E-value=46 Score=30.73 Aligned_cols=77 Identities=17% Similarity=0.230 Sum_probs=43.9
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCe
Q 011801 113 RIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINI 192 (477)
Q Consensus 113 ~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~ 192 (477)
.+++|.|+...=..+...|...|..|++....-......++.. |+.. +.+|-. +.+++++.+++..+.-.++
T Consensus 4 ~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~--~~~D~~-----~~~~~~~~~~~~~~~~~~i 75 (236)
T PRK06483 4 PILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQA-GAQC--IQADFS-----TNAGIMAFIDELKQHTDGL 75 (236)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc-CCEE--EEcCCC-----CHHHHHHHHHHHHhhCCCc
Confidence 4677776665555666677788888776654332233333333 5444 444422 4677777777665444456
Q ss_pred eEEEE
Q 011801 193 KGLII 197 (477)
Q Consensus 193 k~vii 197 (477)
.+++.
T Consensus 76 d~lv~ 80 (236)
T PRK06483 76 RAIIH 80 (236)
T ss_pred cEEEE
Confidence 65443
No 407
>PRK06500 short chain dehydrogenase; Provisional
Probab=73.77 E-value=53 Score=30.47 Aligned_cols=81 Identities=15% Similarity=0.143 Sum_probs=46.0
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCC
Q 011801 112 DRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASIN 191 (477)
Q Consensus 112 ~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~ 191 (477)
..+++|.|+...=..+...|.+.|..|++..-.-.......+.. |.++..+.+|-. +.+++...++...+...+
T Consensus 7 k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~~~ 80 (249)
T PRK06500 7 KTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL-GESALVIRADAG-----DVAAQKALAQALAEAFGR 80 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh-CCceEEEEecCC-----CHHHHHHHHHHHHHHhCC
Confidence 35666666555555566777788887776654322222333333 566666666532 456666666555444456
Q ss_pred eeEEEEe
Q 011801 192 IKGLIIT 198 (477)
Q Consensus 192 ~k~vii~ 198 (477)
+.+|+.+
T Consensus 81 id~vi~~ 87 (249)
T PRK06500 81 LDAVFIN 87 (249)
T ss_pred CCEEEEC
Confidence 7765544
No 408
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=72.99 E-value=54 Score=30.76 Aligned_cols=82 Identities=18% Similarity=0.193 Sum_probs=48.8
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCcc-chHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCC
Q 011801 112 DRIVMGGGATGANELIMFCLANPGDAFLVPSPYYA-AFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASI 190 (477)
Q Consensus 112 ~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~-~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~ 190 (477)
..+++|+|+++.=..+...|++.|-.|++....-. .....++.. +.++..+.+|-. +.+++++++++..+.-.
T Consensus 9 k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~-----~~~~~~~~~~~~~~~~g 82 (251)
T PRK12481 9 KVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEAL-GRKFHFITADLI-----QQKDIDSIVSQAVEVMG 82 (251)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHc-CCeEEEEEeCCC-----CHHHHHHHHHHHHHHcC
Confidence 45677777666666666778889988876543211 111222223 566666776642 57778888876655545
Q ss_pred CeeEEEEeCC
Q 011801 191 NIKGLIITNP 200 (477)
Q Consensus 191 ~~k~vii~nP 200 (477)
++..++ .|.
T Consensus 83 ~iD~lv-~~a 91 (251)
T PRK12481 83 HIDILI-NNA 91 (251)
T ss_pred CCCEEE-ECC
Confidence 677544 444
No 409
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=72.86 E-value=55 Score=30.70 Aligned_cols=80 Identities=18% Similarity=0.273 Sum_probs=43.6
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCC
Q 011801 112 DRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASIN 191 (477)
Q Consensus 112 ~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~ 191 (477)
..+++|+|+...=..+...|.+.|..|++..-.-..-...+... ++. .+++|-. +.+.++++++...+...+
T Consensus 8 k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~-~~~--~~~~Dl~-----~~~~~~~~~~~~~~~~~~ 79 (255)
T PRK06463 8 KVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREK-GVF--TIKCDVG-----NRDQVKKSKEVVEKEFGR 79 (255)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhC-CCe--EEEecCC-----CHHHHHHHHHHHHHHcCC
Confidence 45666666555445556677788877766422111111222222 433 4444432 567788877766555556
Q ss_pred eeEEEEeC
Q 011801 192 IKGLIITN 199 (477)
Q Consensus 192 ~k~vii~n 199 (477)
+.+|+.+.
T Consensus 80 id~li~~a 87 (255)
T PRK06463 80 VDVLVNNA 87 (255)
T ss_pred CCEEEECC
Confidence 77665543
No 410
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=72.34 E-value=48 Score=31.13 Aligned_cols=81 Identities=21% Similarity=0.279 Sum_probs=47.9
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHH---HHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHH
Q 011801 111 PDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDR---DLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQE 187 (477)
Q Consensus 111 ~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~---~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~ 187 (477)
...+++|+|+...=..+...|++.|-.|++..-. ..... .+... +.++..+.+|-. +.+.+++.+++..+
T Consensus 15 ~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~D~~-----~~~~i~~~~~~~~~ 87 (258)
T PRK06935 15 GKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKE-GRKVTFVQVDLT-----KPESAEKVVKEALE 87 (258)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhc-CCceEEEEcCCC-----CHHHHHHHHHHHHH
Confidence 3457777666655556667788889887765433 22221 22222 555666666542 46777777776655
Q ss_pred hCCCeeEEEEe
Q 011801 188 ASINIKGLIIT 198 (477)
Q Consensus 188 ~~~~~k~vii~ 198 (477)
...++++++.+
T Consensus 88 ~~g~id~li~~ 98 (258)
T PRK06935 88 EFGKIDILVNN 98 (258)
T ss_pred HcCCCCEEEEC
Confidence 55567765544
No 411
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=71.17 E-value=61 Score=30.37 Aligned_cols=81 Identities=16% Similarity=0.121 Sum_probs=49.3
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCC
Q 011801 112 DRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASIN 191 (477)
Q Consensus 112 ~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~ 191 (477)
..+++|+|+...=..+...|.+.|.+|++....-.......... +.++..+.+|- -+.+.+++++++..+...+
T Consensus 7 ~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~ 80 (257)
T PRK07067 7 KVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI-GPAAIAVSLDV-----TRQDSIDRIVAAAVERFGG 80 (257)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh-CCceEEEEccC-----CCHHHHHHHHHHHHHHcCC
Confidence 35777766655555666777888988887765544333333323 44555666653 2567788877766555556
Q ss_pred eeEEEEe
Q 011801 192 IKGLIIT 198 (477)
Q Consensus 192 ~k~vii~ 198 (477)
+.+++.+
T Consensus 81 id~li~~ 87 (257)
T PRK07067 81 IDILFNN 87 (257)
T ss_pred CCEEEEC
Confidence 7766654
No 412
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=70.10 E-value=10 Score=34.06 Aligned_cols=99 Identities=22% Similarity=0.304 Sum_probs=49.7
Q ss_pred EEEeCChHHHHHHHHHHhcCCC-CeEEEcCCC-c--c---chHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHH
Q 011801 114 IVMGGGATGANELIMFCLANPG-DAFLVPSPY-Y--A---AFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQ 186 (477)
Q Consensus 114 i~~t~G~t~al~~i~~~l~~~G-d~vlv~~P~-y--~---~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~ 186 (477)
.++|.|..+.=..+...|...| ..|++.... - . .....++.. |.++..+.+|-. |.+++++++++..
T Consensus 3 ylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~-g~~v~~~~~Dv~-----d~~~v~~~~~~~~ 76 (181)
T PF08659_consen 3 YLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESA-GARVEYVQCDVT-----DPEAVAAALAQLR 76 (181)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHT-T-EEEEEE--TT-----SHHHHHHHHHTSH
T ss_pred EEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhC-CCceeeeccCcc-----CHHHHHHHHHHHH
Confidence 4555554433334445565554 344444433 1 1 123344555 889998888743 6899999998877
Q ss_pred HhCCCeeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 011801 187 EASINIKGLIITNPSNPLGT--TLDRDTLKSLVS 218 (477)
Q Consensus 187 ~~~~~~k~vii~nP~NPtG~--~~~~~~l~~l~~ 218 (477)
+..+++++||.+..-...+. -.+.+++....+
T Consensus 77 ~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~ 110 (181)
T PF08659_consen 77 QRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLA 110 (181)
T ss_dssp TTSS-EEEEEE-------B-GCC--HHHHHHHHH
T ss_pred hccCCcceeeeeeeeecccccccCCHHHHHHHHh
Confidence 66778998887754332332 234445554443
No 413
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=70.03 E-value=79 Score=29.33 Aligned_cols=83 Identities=20% Similarity=0.224 Sum_probs=48.0
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCcc-chHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHh
Q 011801 110 DPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYA-AFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEA 188 (477)
Q Consensus 110 ~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~-~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~ 188 (477)
+...+++|+|+...=..+...|++.|-.|++....-. .....+... +.++..+++|-. +.+.+++++++..+.
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~-----~~~~~~~~~~~~~~~ 77 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEAL-GRRFLSLTADLS-----DIEAIKALVDSAVEE 77 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhc-CCceEEEECCCC-----CHHHHHHHHHHHHHH
Confidence 3456778777665555566778888987776653221 111222222 555666666532 467777777765554
Q ss_pred CCCeeEEEEe
Q 011801 189 SINIKGLIIT 198 (477)
Q Consensus 189 ~~~~k~vii~ 198 (477)
..++.+++.+
T Consensus 78 ~~~~d~li~~ 87 (248)
T TIGR01832 78 FGHIDILVNN 87 (248)
T ss_pred cCCCCEEEEC
Confidence 4567765543
No 414
>PRK05717 oxidoreductase; Validated
Probab=69.27 E-value=78 Score=29.64 Aligned_cols=83 Identities=12% Similarity=0.044 Sum_probs=47.0
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhC
Q 011801 110 DPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEAS 189 (477)
Q Consensus 110 ~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~ 189 (477)
....+++|+|+...=..++..|.+.|..|++.+..-.......... +.++..+.+|-. +.+++++++++..+.-
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~-----~~~~~~~~~~~~~~~~ 82 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL-GENAWFIAMDVA-----DEAQVAAGVAEVLGQF 82 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc-CCceEEEEccCC-----CHHHHHHHHHHHHHHh
Confidence 3345777766555555566677778888877654333223323333 445556666532 4677777776654444
Q ss_pred CCeeEEEEe
Q 011801 190 INIKGLIIT 198 (477)
Q Consensus 190 ~~~k~vii~ 198 (477)
.++.+++.+
T Consensus 83 g~id~li~~ 91 (255)
T PRK05717 83 GRLDALVCN 91 (255)
T ss_pred CCCCEEEEC
Confidence 467765544
No 415
>PRK08589 short chain dehydrogenase; Validated
Probab=69.19 E-value=77 Score=30.15 Aligned_cols=81 Identities=21% Similarity=0.233 Sum_probs=48.3
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHH---hhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHh
Q 011801 112 DRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDL---SWRTGVQIVPVHCDISNNFKITREALEAAYERAQEA 188 (477)
Q Consensus 112 ~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~---~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~ 188 (477)
..+++|+|+...=..+...|++.|..|++.... ....... ... +.++..+.+|-. +.+++++++++..+.
T Consensus 7 k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~-~~~~~~~~~Dl~-----~~~~~~~~~~~~~~~ 79 (272)
T PRK08589 7 KVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSN-GGKAKAYHVDIS-----DEQQVKDFASEIKEQ 79 (272)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhc-CCeEEEEEeecC-----CHHHHHHHHHHHHHH
Confidence 356666666555555666788889888877655 3332222 222 556666666532 467777777766555
Q ss_pred CCCeeEEEEeCC
Q 011801 189 SINIKGLIITNP 200 (477)
Q Consensus 189 ~~~~k~vii~nP 200 (477)
..++..++ .|.
T Consensus 80 ~g~id~li-~~A 90 (272)
T PRK08589 80 FGRVDVLF-NNA 90 (272)
T ss_pred cCCcCEEE-ECC
Confidence 45677544 444
No 416
>PRK06194 hypothetical protein; Provisional
Probab=68.85 E-value=77 Score=30.27 Aligned_cols=81 Identities=23% Similarity=0.224 Sum_probs=47.1
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHH---HhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHh
Q 011801 112 DRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRD---LSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEA 188 (477)
Q Consensus 112 ~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~---~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~ 188 (477)
..+++|+|+...=..+...|.+.|..|++.+-.-...... +... |.++..+.+|-. |.++++++++...+.
T Consensus 7 k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~-----d~~~~~~~~~~~~~~ 80 (287)
T PRK06194 7 KVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQ-GAEVLGVRTDVS-----DAAQVEALADAALER 80 (287)
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc-CCeEEEEECCCC-----CHHHHHHHHHHHHHH
Confidence 4577776665444455566778888877665432222222 2222 556766776532 567788877766555
Q ss_pred CCCeeEEEEe
Q 011801 189 SINIKGLIIT 198 (477)
Q Consensus 189 ~~~~k~vii~ 198 (477)
..++.+|+.+
T Consensus 81 ~g~id~vi~~ 90 (287)
T PRK06194 81 FGAVHLLFNN 90 (287)
T ss_pred cCCCCEEEEC
Confidence 5567765544
No 417
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=68.25 E-value=77 Score=29.37 Aligned_cols=85 Identities=21% Similarity=0.182 Sum_probs=47.9
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhh-CCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhC
Q 011801 111 PDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWR-TGVQIVPVHCDISNNFKITREALEAAYERAQEAS 189 (477)
Q Consensus 111 ~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~-~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~ 189 (477)
...+++|+|+...=..++..|.+.|..|++..-.-.......... .+.++..+.+|- .+.+.+..++++..+..
T Consensus 5 ~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 79 (251)
T PRK07231 5 GKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADV-----SDEADVEAAVAAALERF 79 (251)
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCC-----CCHHHHHHHHHHHHHHh
Confidence 346777766554444555667778877776554332222222221 134566666653 25778887777654444
Q ss_pred CCeeEEEEeCC
Q 011801 190 INIKGLIITNP 200 (477)
Q Consensus 190 ~~~k~vii~nP 200 (477)
.++.+|+.+..
T Consensus 80 ~~~d~vi~~ag 90 (251)
T PRK07231 80 GSVDILVNNAG 90 (251)
T ss_pred CCCCEEEECCC
Confidence 56777665543
No 418
>PRK05867 short chain dehydrogenase; Provisional
Probab=67.79 E-value=92 Score=29.08 Aligned_cols=81 Identities=17% Similarity=0.360 Sum_probs=47.5
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHH---HhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHh
Q 011801 112 DRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRD---LSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEA 188 (477)
Q Consensus 112 ~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~---~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~ 188 (477)
..+++|+|+.+.=..+...|.+.|..|++..-.-...... +... +.++..+.+|-. +.+.+++++++..+.
T Consensus 10 k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~-----~~~~~~~~~~~~~~~ 83 (253)
T PRK05867 10 KRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTS-GGKVVPVCCDVS-----QHQQVTSMLDQVTAE 83 (253)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-CCeEEEEEccCC-----CHHHHHHHHHHHHHH
Confidence 4566776665555556667788898887765433222222 2222 556666666542 567777777766554
Q ss_pred CCCeeEEEEe
Q 011801 189 SINIKGLIIT 198 (477)
Q Consensus 189 ~~~~k~vii~ 198 (477)
-.++.+++.+
T Consensus 84 ~g~id~lv~~ 93 (253)
T PRK05867 84 LGGIDIAVCN 93 (253)
T ss_pred hCCCCEEEEC
Confidence 4567765543
No 419
>PRK06841 short chain dehydrogenase; Provisional
Probab=67.48 E-value=87 Score=29.18 Aligned_cols=82 Identities=22% Similarity=0.206 Sum_probs=45.0
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCC
Q 011801 112 DRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASIN 191 (477)
Q Consensus 112 ~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~ 191 (477)
..+++|+|+...=..+...|.+.|..|++....-.......... +.++..+++|-. +.+++++.+++..+.-.+
T Consensus 16 k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~-~~~~~~~~~Dl~-----~~~~~~~~~~~~~~~~~~ 89 (255)
T PRK06841 16 KVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLL-GGNAKGLVCDVS-----DSQSVEAAVAAVISAFGR 89 (255)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhh-CCceEEEEecCC-----CHHHHHHHHHHHHHHhCC
Confidence 45666665444444555667788888777654332211111222 444555666532 567777777665544446
Q ss_pred eeEEEEeC
Q 011801 192 IKGLIITN 199 (477)
Q Consensus 192 ~k~vii~n 199 (477)
+.+|+.+.
T Consensus 90 ~d~vi~~a 97 (255)
T PRK06841 90 IDILVNSA 97 (255)
T ss_pred CCEEEECC
Confidence 77665543
No 420
>PRK05876 short chain dehydrogenase; Provisional
Probab=67.46 E-value=86 Score=29.96 Aligned_cols=101 Identities=18% Similarity=0.235 Sum_probs=56.3
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHH---HhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHH
Q 011801 111 PDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRD---LSWRTGVQIVPVHCDISNNFKITREALEAAYERAQE 187 (477)
Q Consensus 111 ~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~---~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~ 187 (477)
...+++|+|++..=..+...|...|..|++..-.-...... +... |.++..+.+|-. |.+++++++++..+
T Consensus 6 ~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~-~~~~~~~~~Dv~-----d~~~v~~~~~~~~~ 79 (275)
T PRK05876 6 GRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAE-GFDVHGVMCDVR-----HREEVTHLADEAFR 79 (275)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEeCCCC-----CHHHHHHHHHHHHH
Confidence 34577777766555566677888898887655332222222 2222 566766776632 57788887776655
Q ss_pred hCCCeeEEEEeCCC-CCccc--CCCHHHHHHHHH
Q 011801 188 ASINIKGLIITNPS-NPLGT--TLDRDTLKSLVS 218 (477)
Q Consensus 188 ~~~~~k~vii~nP~-NPtG~--~~~~~~l~~l~~ 218 (477)
...++.+|+ .|.. ...|. ..+.++++++.+
T Consensus 80 ~~g~id~li-~nAg~~~~~~~~~~~~~~~~~~~~ 112 (275)
T PRK05876 80 LLGHVDVVF-SNAGIVVGGPIVEMTHDDWRWVID 112 (275)
T ss_pred HcCCCCEEE-ECCCcCCCCCcccCCHHHHHHHHh
Confidence 555677544 4442 11122 245555555443
No 421
>PRK06139 short chain dehydrogenase; Provisional
Probab=66.88 E-value=74 Score=31.57 Aligned_cols=82 Identities=15% Similarity=0.214 Sum_probs=47.8
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchH---HHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHH
Q 011801 111 PDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFD---RDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQE 187 (477)
Q Consensus 111 ~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~---~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~ 187 (477)
...+++|+++.+.=..+...|...|..|++..-.-.... ..++.. |.++..+++|-. |.+++++++++..+
T Consensus 7 ~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~-g~~~~~~~~Dv~-----d~~~v~~~~~~~~~ 80 (330)
T PRK06139 7 GAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRAL-GAEVLVVPTDVT-----DADQVKALATQAAS 80 (330)
T ss_pred CCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEeeCC-----CHHHHHHHHHHHHH
Confidence 345666665554444555667888988877654322222 222333 667666666532 57788888777655
Q ss_pred hCCCeeEEEEe
Q 011801 188 ASINIKGLIIT 198 (477)
Q Consensus 188 ~~~~~k~vii~ 198 (477)
...++.+++.+
T Consensus 81 ~~g~iD~lVnn 91 (330)
T PRK06139 81 FGGRIDVWVNN 91 (330)
T ss_pred hcCCCCEEEEC
Confidence 54567765443
No 422
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=66.83 E-value=1e+02 Score=28.75 Aligned_cols=82 Identities=18% Similarity=0.225 Sum_probs=48.8
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchH---HHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHH
Q 011801 111 PDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFD---RDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQE 187 (477)
Q Consensus 111 ~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~---~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~ 187 (477)
...+++|+|+...=..+...|++.|-.|++..-.-.... ..++.. |.++..+.+|-. +.+.+++++++..+
T Consensus 10 ~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~-~~~~~~~~~D~~-----~~~~~~~~~~~~~~ 83 (255)
T PRK07523 10 GRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQ-GLSAHALAFDVT-----DHDAVRAAIDAFEA 83 (255)
T ss_pred CCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-CceEEEEEccCC-----CHHHHHHHHHHHHH
Confidence 346777776555555555667778888877654322221 122323 566777776642 56778888776655
Q ss_pred hCCCeeEEEEe
Q 011801 188 ASINIKGLIIT 198 (477)
Q Consensus 188 ~~~~~k~vii~ 198 (477)
...++.+|+.+
T Consensus 84 ~~~~~d~li~~ 94 (255)
T PRK07523 84 EIGPIDILVNN 94 (255)
T ss_pred hcCCCCEEEEC
Confidence 55567765543
No 423
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=66.36 E-value=25 Score=34.39 Aligned_cols=115 Identities=19% Similarity=0.286 Sum_probs=67.6
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCe
Q 011801 113 RIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINI 192 (477)
Q Consensus 113 ~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~ 192 (477)
.|++|.|+---=......|++.|-.|+|-+--..+....+.+. -.+++.-++ .|.+.|.+.+++. ++
T Consensus 2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~-~~~f~~gDi-------~D~~~L~~vf~~~-----~i 68 (329)
T COG1087 2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL-QFKFYEGDL-------LDRALLTAVFEEN-----KI 68 (329)
T ss_pred eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc-cCceEEecc-------ccHHHHHHHHHhc-----CC
Confidence 4788888655545555667788977777776666677776654 234444433 3678888888765 66
Q ss_pred eEEE-----------EeCC-----CCCcccCCCHHHHHHHHHHHHhcCeEEEecccccccccCCCCcccHHH
Q 011801 193 KGLI-----------ITNP-----SNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYAATVFSSPKFTSVAE 248 (477)
Q Consensus 193 k~vi-----------i~nP-----~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~~~~~~~~~~~s~~~ 248 (477)
.+|+ +.+| ||-.|+ ..|++.|.++|+.=++=..-+ .+|+.+...++.+
T Consensus 69 daViHFAa~~~VgESv~~Pl~Yy~NNv~gT-------l~Ll~am~~~gv~~~vFSStA-avYG~p~~~PI~E 132 (329)
T COG1087 69 DAVVHFAASISVGESVQNPLKYYDNNVVGT-------LNLIEAMLQTGVKKFIFSSTA-AVYGEPTTSPISE 132 (329)
T ss_pred CEEEECccccccchhhhCHHHHHhhchHhH-------HHHHHHHHHhCCCEEEEecch-hhcCCCCCcccCC
Confidence 6665 2333 222232 347777888876443322222 2466655445433
No 424
>PRK08309 short chain dehydrogenase; Provisional
Probab=66.30 E-value=73 Score=28.51 Aligned_cols=98 Identities=15% Similarity=0.100 Sum_probs=50.4
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhh-CCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCe
Q 011801 114 IVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWR-TGVQIVPVHCDISNNFKITREALEAAYERAQEASINI 192 (477)
Q Consensus 114 i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~-~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~ 192 (477)
+++|+|+ +....+...|...|..|.+..-............ .+.++..+++|-. |.+.+.++++...+...++
T Consensus 3 vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~-----d~~sv~~~i~~~l~~~g~i 76 (177)
T PRK08309 3 ALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYH-----DDDALKLAIKSTIEKNGPF 76 (177)
T ss_pred EEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCC-----CHHHHHHHHHHHHHHcCCC
Confidence 5667665 5556677888888988877643322111111101 1224445555432 5677777777655443344
Q ss_pred eEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeE
Q 011801 193 KGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIH 226 (477)
Q Consensus 193 k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~ 226 (477)
..++ ..-|.- --+.++++|++.++.
T Consensus 77 d~lv-~~vh~~--------~~~~~~~~~~~~gv~ 101 (177)
T PRK08309 77 DLAV-AWIHSS--------AKDALSVVCRELDGS 101 (177)
T ss_pred eEEE-Eecccc--------chhhHHHHHHHHccC
Confidence 4333 222221 134566666666643
No 425
>PRK08862 short chain dehydrogenase; Provisional
Probab=65.43 E-value=72 Score=29.60 Aligned_cols=82 Identities=10% Similarity=0.076 Sum_probs=49.5
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHH---HhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHh
Q 011801 112 DRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRD---LSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEA 188 (477)
Q Consensus 112 ~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~---~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~ 188 (477)
..+++|+|+.+.=..+...|++.|..|++..-.-...... +... |.++..+.+|-. +.+++++.+++..+.
T Consensus 6 k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~-~~~~~~~~~D~~-----~~~~~~~~~~~~~~~ 79 (227)
T PRK08862 6 SIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSAL-TDNVYSFQLKDF-----SQESIRHLFDAIEQQ 79 (227)
T ss_pred eEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-CCCeEEEEccCC-----CHHHHHHHHHHHHHH
Confidence 4577777766555566677888999888865443322222 2233 566667776632 567888777766544
Q ss_pred CC-CeeEEEEeCC
Q 011801 189 SI-NIKGLIITNP 200 (477)
Q Consensus 189 ~~-~~k~vii~nP 200 (477)
-. ++.+ +++|.
T Consensus 80 ~g~~iD~-li~na 91 (227)
T PRK08862 80 FNRAPDV-LVNNW 91 (227)
T ss_pred hCCCCCE-EEECC
Confidence 33 6775 44444
No 426
>PF02662 FlpD: Methyl-viologen-reducing hydrogenase, delta subunit; InterPro: IPR003813 Methyl-viologen-reducing hydrogenase (MVH) is one of the enzymes involved in methanogenesis and coded in the mth-flp-mvh-mrt cluster of methane genes in Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) []. No specific functions have been assigned to the delta subunit.; GO: 0015948 methanogenesis, 0055114 oxidation-reduction process
Probab=65.28 E-value=25 Score=29.57 Aligned_cols=59 Identities=20% Similarity=0.438 Sum_probs=45.0
Q ss_pred CcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEE--eCC---CCCcccCCCHHHHHHHHHHHHhcCe
Q 011801 157 GVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLII--TNP---SNPLGTTLDRDTLKSLVSFINDKNI 225 (477)
Q Consensus 157 g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii--~nP---~NPtG~~~~~~~l~~l~~~~~~~~~ 225 (477)
+++++.+||.. ++++.-+..++++ ..++|++ |.| |...|......+.+.+-++..+.|+
T Consensus 28 ~vriIrvpC~G----rv~~~~il~Af~~------GADGV~V~gC~~g~Ch~~~Gn~~a~~Rv~~~k~~L~~~Gi 91 (124)
T PF02662_consen 28 NVRIIRVPCSG----RVDPEFILRAFEK------GADGVLVAGCHPGDCHYREGNYRAEKRVERLKKLLEELGI 91 (124)
T ss_pred CeEEEEccCCC----ccCHHHHHHHHHc------CCCEEEEeCCCCCCCCcchhhHHHHHHHHHHHHHHHHcCC
Confidence 58889999853 6899999999986 5667776 333 5689998888888888777776653
No 427
>COG0329 DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=64.73 E-value=1.4e+02 Score=29.19 Aligned_cols=108 Identities=28% Similarity=0.374 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHhcccCCCCccCCCcEEEeCC---hHHHHHHHHHHhcCCC-CeEEEcCCCccchHHHHhhhCCcEEEEEe
Q 011801 89 PEFRQAVAKFMGKGRGGRVTFDPDRIVMGGG---ATGANELIMFCLANPG-DAFLVPSPYYAAFDRDLSWRTGVQIVPVH 164 (477)
Q Consensus 89 ~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G---~t~al~~i~~~l~~~G-d~vlv~~P~y~~~~~~~~~~~g~~~~~v~ 164 (477)
.+=|.++.+...+.-+.++ -|+...| ..++++++-.+- +-| |.+++..|+|...... ..
T Consensus 56 ~eEr~~v~~~~v~~~~grv-----pviaG~g~~~t~eai~lak~a~-~~Gad~il~v~PyY~k~~~~-gl---------- 118 (299)
T COG0329 56 LEERKEVLEAVVEAVGGRV-----PVIAGVGSNSTAEAIELAKHAE-KLGADGILVVPPYYNKPSQE-GL---------- 118 (299)
T ss_pred HHHHHHHHHHHHHHHCCCC-----cEEEecCCCcHHHHHHHHHHHH-hcCCCEEEEeCCCCcCCChH-HH----------
Confidence 3445555555544333222 1666555 445555554433 334 8999999999644311 00
Q ss_pred ccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEeccc
Q 011801 165 CDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEI 232 (477)
Q Consensus 165 ~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~ 232 (477)
.+.+....+. - +...++.++| +.||..++.+.+.++++ -.|+.=|=|..
T Consensus 119 ----------~~hf~~ia~a----~-~lPvilYN~P-~~tg~~l~~e~i~~la~---~~nivgiKd~~ 167 (299)
T COG0329 119 ----------YAHFKAIAEA----V-DLPVILYNIP-SRTGVDLSPETIARLAE---HPNIVGVKDSS 167 (299)
T ss_pred ----------HHHHHHHHHh----c-CCCEEEEeCc-cccCCCCCHHHHHHHhc---CCCEEEEEeCC
Confidence 1112222221 1 4556677766 78999999777777666 34666555543
No 428
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=64.69 E-value=34 Score=30.16 Aligned_cols=90 Identities=16% Similarity=0.182 Sum_probs=49.3
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCee
Q 011801 114 IVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIK 193 (477)
Q Consensus 114 i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k 193 (477)
|++++|+...=..++..|.+.|-.|......-..... .. +++++...+ .|.+.+.++++ +..
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~-~~~~~~~d~-------~d~~~~~~al~-------~~d 62 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SP-GVEIIQGDL-------FDPDSVKAALK-------GAD 62 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CT-TEEEEESCT-------TCHHHHHHHHT-------TSS
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---cc-ccccceeee-------hhhhhhhhhhh-------hcc
Confidence 4454442222233445565666555554433322222 23 777665443 25788888876 566
Q ss_pred EEEEeCCCCCcccCCCHHHHHHHHHHHHhcCe
Q 011801 194 GLIITNPSNPLGTTLDRDTLKSLVSFINDKNI 225 (477)
Q Consensus 194 ~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~ 225 (477)
.|+.+-+.++. +.+..+.+++.|++.++
T Consensus 63 ~vi~~~~~~~~----~~~~~~~~~~a~~~~~~ 90 (183)
T PF13460_consen 63 AVIHAAGPPPK----DVDAAKNIIEAAKKAGV 90 (183)
T ss_dssp EEEECCHSTTT----HHHHHHHHHHHHHHTTS
T ss_pred hhhhhhhhhcc----ccccccccccccccccc
Confidence 77776544333 25567777777776543
No 429
>PRK07825 short chain dehydrogenase; Provisional
Probab=64.26 E-value=87 Score=29.65 Aligned_cols=80 Identities=18% Similarity=0.128 Sum_probs=42.6
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCC
Q 011801 112 DRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASIN 191 (477)
Q Consensus 112 ~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~ 191 (477)
..+++|+|+.+.=..+...|.+.|-.|++....-.......... + ++..+.+|-. +.+++++++++..+...+
T Consensus 6 ~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~-~-~~~~~~~D~~-----~~~~~~~~~~~~~~~~~~ 78 (273)
T PRK07825 6 KVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAEL-G-LVVGGPLDVT-----DPASFAAFLDAVEADLGP 78 (273)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-c-cceEEEccCC-----CHHHHHHHHHHHHHHcCC
Confidence 35666665544444555667778887776543322222222222 2 2333444432 567787777766554446
Q ss_pred eeEEEEe
Q 011801 192 IKGLIIT 198 (477)
Q Consensus 192 ~k~vii~ 198 (477)
+.+++.+
T Consensus 79 id~li~~ 85 (273)
T PRK07825 79 IDVLVNN 85 (273)
T ss_pred CCEEEEC
Confidence 6655443
No 430
>PRK08278 short chain dehydrogenase; Provisional
Probab=64.22 E-value=1.1e+02 Score=29.00 Aligned_cols=81 Identities=17% Similarity=0.225 Sum_probs=47.4
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccc----------hHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHH
Q 011801 112 DRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAA----------FDRDLSWRTGVQIVPVHCDISNNFKITREALEAA 181 (477)
Q Consensus 112 ~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~----------~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~ 181 (477)
..+++|+|+...=..+...|.+.|..|++....... ....+... +.++..+.+|-. +.+.++++
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~D~~-----~~~~i~~~ 80 (273)
T PRK08278 7 KTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAA-GGQALPLVGDVR-----DEDQVAAA 80 (273)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhc-CCceEEEEecCC-----CHHHHHHH
Confidence 356777666555555666677888888766543321 11122333 566777776642 56777777
Q ss_pred HHHHHHhCCCeeEEEEe
Q 011801 182 YERAQEASINIKGLIIT 198 (477)
Q Consensus 182 ~~~~~~~~~~~k~vii~ 198 (477)
+++..+.-.++.+|+.+
T Consensus 81 ~~~~~~~~g~id~li~~ 97 (273)
T PRK08278 81 VAKAVERFGGIDICVNN 97 (273)
T ss_pred HHHHHHHhCCCCEEEEC
Confidence 77654444467765544
No 431
>PRK06182 short chain dehydrogenase; Validated
Probab=64.15 E-value=94 Score=29.44 Aligned_cols=97 Identities=14% Similarity=0.164 Sum_probs=51.0
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCe
Q 011801 113 RIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINI 192 (477)
Q Consensus 113 ~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~ 192 (477)
.+++|+|+...=..+...|.+.|..|++..-.-..... +... ++..+..++. |.+.+++++++..+...++
T Consensus 5 ~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~-~~~~-~~~~~~~Dv~-------~~~~~~~~~~~~~~~~~~i 75 (273)
T PRK06182 5 VALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMED-LASL-GVHPLSLDVT-------DEASIKAAVDTIIAEEGRI 75 (273)
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHhC-CCeEEEeeCC-------CHHHHHHHHHHHHHhcCCC
Confidence 46776665544445556677788888765433222211 2222 5555444432 5677777777665555567
Q ss_pred eEEEEeCCCCCcccC--CCHHHHHHHHH
Q 011801 193 KGLIITNPSNPLGTT--LDRDTLKSLVS 218 (477)
Q Consensus 193 k~vii~nP~NPtG~~--~~~~~l~~l~~ 218 (477)
..|+.+....+.|.. .+.++++.+.+
T Consensus 76 d~li~~ag~~~~~~~~~~~~~~~~~~~~ 103 (273)
T PRK06182 76 DVLVNNAGYGSYGAIEDVPIDEARRQFE 103 (273)
T ss_pred CEEEECCCcCCCCchhhCCHHHHHHHHh
Confidence 765544333333322 24444554443
No 432
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=64.01 E-value=88 Score=29.01 Aligned_cols=81 Identities=15% Similarity=0.222 Sum_probs=46.6
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEc-CCCccc---hHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHh
Q 011801 113 RIVMGGGATGANELIMFCLANPGDAFLVP-SPYYAA---FDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEA 188 (477)
Q Consensus 113 ~i~~t~G~t~al~~i~~~l~~~Gd~vlv~-~P~y~~---~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~ 188 (477)
.+++|+|+...=..+...|.+.|..|++. ...=.. ....++.. +.++..+.+|-. |.+.+++++++..+.
T Consensus 6 ~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~-----~~~~~~~~~~~~~~~ 79 (250)
T PRK08063 6 VALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEAL-GRKALAVKANVG-----DVEKIKEMFAQIDEE 79 (250)
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCeEEEEEcCCC-----CHHHHHHHHHHHHHH
Confidence 56777766555555667778888776652 211111 11122333 667777777643 577888888766554
Q ss_pred CCCeeEEEEeC
Q 011801 189 SINIKGLIITN 199 (477)
Q Consensus 189 ~~~~k~vii~n 199 (477)
..++++|+.+.
T Consensus 80 ~~~id~vi~~a 90 (250)
T PRK08063 80 FGRLDVFVNNA 90 (250)
T ss_pred cCCCCEEEECC
Confidence 44677655543
No 433
>PRK07791 short chain dehydrogenase; Provisional
Probab=63.75 E-value=86 Score=30.18 Aligned_cols=82 Identities=17% Similarity=0.184 Sum_probs=47.7
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCc---------cchHH---HHhhhCCcEEEEEeccCCCCcccCHHHHH
Q 011801 112 DRIVMGGGATGANELIMFCLANPGDAFLVPSPYY---------AAFDR---DLSWRTGVQIVPVHCDISNNFKITREALE 179 (477)
Q Consensus 112 ~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y---------~~~~~---~~~~~~g~~~~~v~~~~~~~f~i~~~~l~ 179 (477)
..+++|.|+.+.=..+...|++.|-.|++..-.. ..... .++.. |.++..+.+|-. +.++++
T Consensus 7 k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~Dv~-----~~~~v~ 80 (286)
T PRK07791 7 RVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA-GGEAVANGDDIA-----DWDGAA 80 (286)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhc-CCceEEEeCCCC-----CHHHHH
Confidence 4567777766555566677888888777654222 11111 12222 556666766642 567788
Q ss_pred HHHHHHHHhCCCeeEEEEeCC
Q 011801 180 AAYERAQEASINIKGLIITNP 200 (477)
Q Consensus 180 ~~~~~~~~~~~~~k~vii~nP 200 (477)
+.+++..+...++.+++ +|.
T Consensus 81 ~~~~~~~~~~g~id~lv-~nA 100 (286)
T PRK07791 81 NLVDAAVETFGGLDVLV-NNA 100 (286)
T ss_pred HHHHHHHHhcCCCCEEE-ECC
Confidence 87776655545677644 443
No 434
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=63.62 E-value=1.2e+02 Score=28.36 Aligned_cols=102 Identities=17% Similarity=0.213 Sum_probs=55.5
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHH---HHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHH
Q 011801 111 PDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDR---DLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQE 187 (477)
Q Consensus 111 ~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~---~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~ 187 (477)
...+++|+|++..=..+...|++.|..|++..-.-..... .++.. +.++..+++|-. +.+.+++.++...+
T Consensus 9 ~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~-----~~~~~~~~~~~~~~ 82 (254)
T PRK08085 9 GKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE-GIKAHAAPFNVT-----HKQEVEAAIEHIEK 82 (254)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc-CCeEEEEecCCC-----CHHHHHHHHHHHHH
Confidence 3457777766655556667788888887775432221111 12222 556666776642 46777777776655
Q ss_pred hCCCeeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 011801 188 ASINIKGLIITNPSNPLGT--TLDRDTLKSLVS 218 (477)
Q Consensus 188 ~~~~~k~vii~nP~NPtG~--~~~~~~l~~l~~ 218 (477)
...++.+|+.+-...+.+. ..+.+++++..+
T Consensus 83 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~ 115 (254)
T PRK08085 83 DIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIA 115 (254)
T ss_pred hcCCCCEEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 5456776554432211111 234555555544
No 435
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=63.34 E-value=76 Score=30.04 Aligned_cols=100 Identities=20% Similarity=0.221 Sum_probs=64.5
Q ss_pred cEEEeCChHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHhhhCC-cEEEEEeccCCCCcccCHHHHHHHHHHHHHhCC
Q 011801 113 RIVMGGGATGANE-LIMFCLANPGDAFLVPSPYYAAFDRDLSWRTG-VQIVPVHCDISNNFKITREALEAAYERAQEASI 190 (477)
Q Consensus 113 ~i~~t~G~t~al~-~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g-~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~ 190 (477)
.|++.+|+++++- .+.+.|.+.|-+|++..-.-......+... + .++.++.+|- -|.++++++++...+.-.
T Consensus 7 kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~-~~~~~~~~~~DV-----tD~~~~~~~i~~~~~~~g 80 (246)
T COG4221 7 KVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEI-GAGAALALALDV-----TDRAAVEAAIEALPEEFG 80 (246)
T ss_pred cEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhh-ccCceEEEeecc-----CCHHHHHHHHHHHHHhhC
Confidence 5666666666664 556778999998888876665555555444 5 4566666553 267888888887776666
Q ss_pred CeeEEEEeCCCCCcccC---CCHHHHHHHHHH
Q 011801 191 NIKGLIITNPSNPLGTT---LDRDTLKSLVSF 219 (477)
Q Consensus 191 ~~k~vii~nP~NPtG~~---~~~~~l~~l~~~ 219 (477)
++.. +++|..--.|.- .+.++|+..++.
T Consensus 81 ~iDi-LvNNAGl~~g~~~~~~~~~dw~~Mid~ 111 (246)
T COG4221 81 RIDI-LVNNAGLALGDPLDEADLDDWDRMIDT 111 (246)
T ss_pred cccE-EEecCCCCcCChhhhCCHHHHHHHHHH
Confidence 7874 666664333333 356667666663
No 436
>PRK07478 short chain dehydrogenase; Provisional
Probab=63.03 E-value=78 Score=29.58 Aligned_cols=101 Identities=14% Similarity=0.167 Sum_probs=54.7
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHH---HHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHh
Q 011801 112 DRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDR---DLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEA 188 (477)
Q Consensus 112 ~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~---~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~ 188 (477)
..+++|+|+...=..+...|++.|..|++..-.-..... .++.. +.++..+++|-. +.+.+++++++..+.
T Consensus 7 k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~-----~~~~~~~~~~~~~~~ 80 (254)
T PRK07478 7 KVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAE-GGEAVALAGDVR-----DEAYAKALVALAVER 80 (254)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEcCCC-----CHHHHHHHHHHHHHh
Confidence 356666665544445556777888888776533222222 22223 556666776642 567788777766555
Q ss_pred CCCeeEEEEeCCCC-Cccc--CCCHHHHHHHHH
Q 011801 189 SINIKGLIITNPSN-PLGT--TLDRDTLKSLVS 218 (477)
Q Consensus 189 ~~~~k~vii~nP~N-PtG~--~~~~~~l~~l~~ 218 (477)
..++.+++.+-... +.+. ..+.+++++..+
T Consensus 81 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~ 113 (254)
T PRK07478 81 FGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLA 113 (254)
T ss_pred cCCCCEEEECCCCCCCCCChhhCCHHHHHHHHH
Confidence 45677655432221 2222 234455555544
No 437
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain. Proteins with this uncharacterized domain include two apparent ortholog families in the Archaea, one of which is universal among the first four completed archaeal genomes, and YLR143W, a much longer protein from Saccharomyces cerevisiae. The domain comprises the full length of the archaeal proteins and the first third of the yeast protein.
Probab=62.49 E-value=1e+02 Score=28.87 Aligned_cols=99 Identities=8% Similarity=0.148 Sum_probs=60.6
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEE--cCC----Cc--c----chH-HHHhhhCCcEEEEEeccCCCCcccCHHHHHH
Q 011801 114 IVMGGGATGANELIMFCLANPGDAFLV--PSP----YY--A----AFD-RDLSWRTGVQIVPVHCDISNNFKITREALEA 180 (477)
Q Consensus 114 i~~t~G~t~al~~i~~~l~~~Gd~vlv--~~P----~y--~----~~~-~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~ 180 (477)
+++-+|+-....++..++.. -+.+.+ ..| .| + .+. ..++.. |+.++.++.... ..--.++|.+
T Consensus 4 ~~l~SGGKDS~~al~~a~~~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~al-gipl~~~~~~~~--~e~~~e~l~~ 79 (223)
T TIGR00290 4 AALISGGKDSCLALYHALKE-HEVISLVNIMPENEESYMFHGVNAHLTDLQAESI-GIPLIKLYTEGT--EEDEVEELKG 79 (223)
T ss_pred EEEecCcHHHHHHHHHHHHh-CeeEEEEEEecCCCCcccccccCHHHHHHHHHHc-CCCeEEeecCCC--ccHHHHHHHH
Confidence 45667777777777777655 442222 111 11 1 111 233434 888877665322 2223566666
Q ss_pred HHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEE
Q 011801 181 AYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLV 228 (477)
Q Consensus 181 ~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI 228 (477)
++++. ++.+|+ +|.+.+..+...+-+.|.+.|+..+
T Consensus 80 ~l~~~-----gv~~vv-------~GdI~s~~qr~~~e~v~~~lgl~~~ 115 (223)
T TIGR00290 80 ILHTL-----DVEAVV-------FGAIYSEYQKTRIERVCRELGLKSF 115 (223)
T ss_pred HHHHc-----CCCEEE-------ECCcccHHHHHHHHHHHHhcCCEEe
Confidence 66543 566655 6999999999999999999998655
No 438
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=62.32 E-value=14 Score=36.25 Aligned_cols=67 Identities=15% Similarity=0.254 Sum_probs=47.2
Q ss_pred HHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEE
Q 011801 150 RDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLV 228 (477)
Q Consensus 150 ~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI 228 (477)
..+... +.+++.+.+..+.+|.+..+.+.+.-+.. .. .++ .+.|-.++++++++|++.|+++||-||
T Consensus 23 d~ma~~-K~N~lhlHl~D~~~~~le~~~~p~l~~~g----~~------~~~-~~~~~~yT~~di~elv~yA~~rgI~vi 89 (303)
T cd02742 23 DVLARY-KINTFHWHLTDDQAWRIESKKFPELAEKG----GQ------INP-RSPGGFYTYAQLKDIIEYAAARGIEVI 89 (303)
T ss_pred HHHHHh-CCcEEEEeeecCCCceEeeCccchhhhhc----cc------ccC-CCCCCeECHHHHHHHHHHHHHcCCEEE
Confidence 344444 88888888877778888766655543321 11 112 244568999999999999999999888
No 439
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=61.97 E-value=1.2e+02 Score=28.81 Aligned_cols=82 Identities=20% Similarity=0.163 Sum_probs=47.1
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHH---HHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHH
Q 011801 111 PDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDR---DLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQE 187 (477)
Q Consensus 111 ~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~---~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~ 187 (477)
...+++|+|+...=..+...|.+.|..|++....-..... .+... |.++..+.+|-. +.+++++++++..+
T Consensus 10 ~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~-----~~~~v~~~~~~~~~ 83 (278)
T PRK08277 10 GKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAA-GGEALAVKADVL-----DKESLEQARQQILE 83 (278)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEECCCC-----CHHHHHHHHHHHHH
Confidence 3456666665544466667777889888776543222222 12222 556777777642 46677777766544
Q ss_pred hCCCeeEEEEe
Q 011801 188 ASINIKGLIIT 198 (477)
Q Consensus 188 ~~~~~k~vii~ 198 (477)
.-.++.+++.+
T Consensus 84 ~~g~id~li~~ 94 (278)
T PRK08277 84 DFGPCDILING 94 (278)
T ss_pred HcCCCCEEEEC
Confidence 44467765543
No 440
>PRK08226 short chain dehydrogenase; Provisional
Probab=61.77 E-value=1.4e+02 Score=28.00 Aligned_cols=82 Identities=22% Similarity=0.276 Sum_probs=47.8
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHH---HHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHH
Q 011801 111 PDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDR---DLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQE 187 (477)
Q Consensus 111 ~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~---~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~ 187 (477)
...+++|.|+...=..+...|+..|..|++....-. ... .+... +.++..+.+|-. +.+++++++++..+
T Consensus 6 ~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~-~~~~~~~~~Dl~-----~~~~v~~~~~~~~~ 78 (263)
T PRK08226 6 GKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGR-GHRCTAVVADVR-----DPASVAAAIKRAKE 78 (263)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHh-CCceEEEECCCC-----CHHHHHHHHHHHHH
Confidence 345777776655555666677788887777654322 111 12222 556666666542 46777777776655
Q ss_pred hCCCeeEEEEeC
Q 011801 188 ASINIKGLIITN 199 (477)
Q Consensus 188 ~~~~~k~vii~n 199 (477)
.-.++++|+.+.
T Consensus 79 ~~~~id~vi~~a 90 (263)
T PRK08226 79 KEGRIDILVNNA 90 (263)
T ss_pred HcCCCCEEEECC
Confidence 555677665543
No 441
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=61.76 E-value=25 Score=30.01 Aligned_cols=59 Identities=19% Similarity=0.313 Sum_probs=41.6
Q ss_pred cccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHH-HHHHHHHHHHhc--CeE-EEeccccc
Q 011801 171 FKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRD-TLKSLVSFINDK--NIH-LVCDEIYA 234 (477)
Q Consensus 171 f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~-~l~~l~~~~~~~--~~~-lI~De~y~ 234 (477)
..-+.+.|.+.+++. ++..+++..|-|..|..-+.. ..++.++...+. ++. ..+||-|+
T Consensus 36 ~~~~~~~l~~li~~~-----~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~T 98 (135)
T PF03652_consen 36 REKDIEELKKLIEEY-----QIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERLT 98 (135)
T ss_dssp CCCCHHHHHHHHHHC-----CECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCS
T ss_pred CchHHHHHHHHHHHh-----CCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChh
Confidence 356889999999875 889999999999888865533 355555544443 654 45899886
No 442
>PRK05855 short chain dehydrogenase; Validated
Probab=61.55 E-value=1.6e+02 Score=31.26 Aligned_cols=124 Identities=19% Similarity=0.213 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHhcccCC--------------CCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHH---H
Q 011801 89 PEFRQAVAKFMGKGRGG--------------RVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDR---D 151 (477)
Q Consensus 89 ~~lr~aia~~~~~~~g~--------------~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~---~ 151 (477)
.++.+.|.+|+.+..+. ...+....+++|+|+.+.=..+...|.+.|..|++..-.-..... .
T Consensus 279 ~~~~~~i~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~ 358 (582)
T PRK05855 279 QVLAAAVAEFVDAVEGGPPARALLRARVGRPRGPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAEL 358 (582)
T ss_pred hHHHHHHHHHHHhccCCCchHHHHHhhhccccccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 46778888888764321 011233446665554444445556788889888776544332222 2
Q ss_pred HhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccC--CCHHHHHHHHH
Q 011801 152 LSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTT--LDRDTLKSLVS 218 (477)
Q Consensus 152 ~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~--~~~~~l~~l~~ 218 (477)
++.. |.++..+++|-. |.+++++.+++..+...++.+++.+--....|.. .+.++++...+
T Consensus 359 ~~~~-~~~~~~~~~Dv~-----~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 421 (582)
T PRK05855 359 IRAA-GAVAHAYRVDVS-----DADAMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLD 421 (582)
T ss_pred HHhc-CCeEEEEEcCCC-----CHHHHHHHHHHHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHH
Confidence 2223 566666776642 5778888887765555567765443222223322 34455555544
No 443
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=61.39 E-value=1.3e+02 Score=28.30 Aligned_cols=83 Identities=14% Similarity=0.189 Sum_probs=48.8
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHH---HhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHH
Q 011801 111 PDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRD---LSWRTGVQIVPVHCDISNNFKITREALEAAYERAQE 187 (477)
Q Consensus 111 ~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~---~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~ 187 (477)
...+++|+|+...=..+...|+..|-.|++..-.-...... +... |.++..+++|-. +.+.+++++++..+
T Consensus 10 ~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~-----~~~~~~~~~~~~~~ 83 (265)
T PRK07097 10 GKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYREL-GIEAHGYVCDVT-----DEDGVQAMVSQIEK 83 (265)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc-CCceEEEEcCCC-----CHHHHHHHHHHHHH
Confidence 34577776665554556666777887777664333222221 2222 556777777643 57788888876655
Q ss_pred hCCCeeEEEEeC
Q 011801 188 ASINIKGLIITN 199 (477)
Q Consensus 188 ~~~~~k~vii~n 199 (477)
.-.++.+|+.+.
T Consensus 84 ~~~~id~li~~a 95 (265)
T PRK07097 84 EVGVIDILVNNA 95 (265)
T ss_pred hCCCCCEEEECC
Confidence 444677766553
No 444
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=61.30 E-value=1.3e+02 Score=27.89 Aligned_cols=77 Identities=13% Similarity=0.186 Sum_probs=46.0
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhC
Q 011801 110 DPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEAS 189 (477)
Q Consensus 110 ~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~ 189 (477)
....+++|+|+...=..+...|++.|..|++..... .... +.++..+++|-. +.+.+++.+++..+..
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~------~~~~-~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~ 74 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF------LTQE-DYPFATFVLDVS-----DAAAVAQVCQRLLAET 74 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch------hhhc-CCceEEEEecCC-----CHHHHHHHHHHHHHHc
Confidence 344677777665555555666778887777665433 2222 455666666532 5677777777655544
Q ss_pred CCeeEEEEe
Q 011801 190 INIKGLIIT 198 (477)
Q Consensus 190 ~~~k~vii~ 198 (477)
.++.+|+.+
T Consensus 75 ~~id~vi~~ 83 (252)
T PRK08220 75 GPLDVLVNA 83 (252)
T ss_pred CCCCEEEEC
Confidence 567765543
No 445
>PRK07109 short chain dehydrogenase; Provisional
Probab=61.27 E-value=1e+02 Score=30.51 Aligned_cols=81 Identities=20% Similarity=0.275 Sum_probs=47.9
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchH---HHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHH
Q 011801 111 PDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFD---RDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQE 187 (477)
Q Consensus 111 ~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~---~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~ 187 (477)
...+++|.|+...=..+...|+..|..|++..-.-.... ..++.. |.++..+.+|-. |.++++++++...+
T Consensus 8 ~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~-g~~~~~v~~Dv~-----d~~~v~~~~~~~~~ 81 (334)
T PRK07109 8 RQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAA-GGEALAVVADVA-----DAEAVQAAADRAEE 81 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc-CCcEEEEEecCC-----CHHHHHHHHHHHHH
Confidence 345667666555445555778888888776554322222 222333 667777777643 57778887776655
Q ss_pred hCCCeeEEEE
Q 011801 188 ASINIKGLII 197 (477)
Q Consensus 188 ~~~~~k~vii 197 (477)
.-.++..++.
T Consensus 82 ~~g~iD~lIn 91 (334)
T PRK07109 82 ELGPIDTWVN 91 (334)
T ss_pred HCCCCCEEEE
Confidence 4446775543
No 446
>PRK06196 oxidoreductase; Provisional
Probab=61.19 E-value=77 Score=30.95 Aligned_cols=81 Identities=25% Similarity=0.278 Sum_probs=42.0
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCC
Q 011801 111 PDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASI 190 (477)
Q Consensus 111 ~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~ 190 (477)
...+++|+|+...=..+...|...|-.|++..-.-...........++.. +.+|-. |.+.+++++++..+...
T Consensus 26 ~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~--~~~Dl~-----d~~~v~~~~~~~~~~~~ 98 (315)
T PRK06196 26 GKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEV--VMLDLA-----DLESVRAFAERFLDSGR 98 (315)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeE--EEccCC-----CHHHHHHHHHHHHhcCC
Confidence 34566666554433344566777887777654332222222221113333 444421 56778887776655445
Q ss_pred CeeEEEEe
Q 011801 191 NIKGLIIT 198 (477)
Q Consensus 191 ~~k~vii~ 198 (477)
++.+|+.+
T Consensus 99 ~iD~li~n 106 (315)
T PRK06196 99 RIDILINN 106 (315)
T ss_pred CCCEEEEC
Confidence 67755543
No 447
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=61.03 E-value=75 Score=29.87 Aligned_cols=101 Identities=17% Similarity=0.178 Sum_probs=53.5
Q ss_pred CCcEEEeCChH--HHHHHHHHHhcCCCCeEEEcCC-------Ccc-------chHHHHhhhCCcEEEEEeccCCCCcccC
Q 011801 111 PDRIVMGGGAT--GANELIMFCLANPGDAFLVPSP-------YYA-------AFDRDLSWRTGVQIVPVHCDISNNFKIT 174 (477)
Q Consensus 111 ~~~i~~t~G~t--~al~~i~~~l~~~Gd~vlv~~P-------~y~-------~~~~~~~~~~g~~~~~v~~~~~~~f~i~ 174 (477)
...+++|.|+. +.=..+...|+..|..|++... .+. .....++.. |.++..+++|-. +
T Consensus 6 ~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~D~~-----~ 79 (256)
T PRK12859 6 NKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKN-GVKVSSMELDLT-----Q 79 (256)
T ss_pred CcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhc-CCeEEEEEcCCC-----C
Confidence 34677776652 2223344556678888776421 111 011222333 677777777642 5
Q ss_pred HHHHHHHHHHHHHhCCCeeEEEEeCCCC-Cc--ccCCCHHHHHHHHH
Q 011801 175 REALEAAYERAQEASINIKGLIITNPSN-PL--GTTLDRDTLKSLVS 218 (477)
Q Consensus 175 ~~~l~~~~~~~~~~~~~~k~vii~nP~N-Pt--G~~~~~~~l~~l~~ 218 (477)
.+++++++++..+.-.++.+++ .|+.. .. -...+.+++++..+
T Consensus 80 ~~~i~~~~~~~~~~~g~id~li-~~ag~~~~~~~~~~~~~~~~~~~~ 125 (256)
T PRK12859 80 NDAPKELLNKVTEQLGYPHILV-NNAAYSTNNDFSNLTAEELDKHYM 125 (256)
T ss_pred HHHHHHHHHHHHHHcCCCcEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 7788888877665544666544 44421 11 12345555555544
No 448
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=60.81 E-value=53 Score=30.89 Aligned_cols=83 Identities=18% Similarity=0.257 Sum_probs=46.7
Q ss_pred CCcEEEeCCh--HHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHh
Q 011801 111 PDRIVMGGGA--TGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEA 188 (477)
Q Consensus 111 ~~~i~~t~G~--t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~ 188 (477)
...+++|.|+ .+.=..+...|++.|.+|++..-. ......++...+.++..+++|-. +.++++++++...+.
T Consensus 7 ~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~-~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~v~~~~~~~~~~ 80 (252)
T PRK06079 7 GKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQN-DRMKKSLQKLVDEEDLLVECDVA-----SDESIERAFATIKER 80 (252)
T ss_pred CCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCc-hHHHHHHHhhccCceeEEeCCCC-----CHHHHHHHHHHHHHH
Confidence 3457777766 344455556778889888876432 11222222211334556666542 567788877766554
Q ss_pred CCCeeEEEEeCC
Q 011801 189 SINIKGLIITNP 200 (477)
Q Consensus 189 ~~~~k~vii~nP 200 (477)
..++.++ ++|.
T Consensus 81 ~g~iD~l-v~nA 91 (252)
T PRK06079 81 VGKIDGI-VHAI 91 (252)
T ss_pred hCCCCEE-EEcc
Confidence 4567754 4444
No 449
>PRK06114 short chain dehydrogenase; Provisional
Probab=60.76 E-value=1.1e+02 Score=28.51 Aligned_cols=82 Identities=15% Similarity=0.210 Sum_probs=47.5
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCc-cchH---HHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHH
Q 011801 111 PDRIVMGGGATGANELIMFCLANPGDAFLVPSPYY-AAFD---RDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQ 186 (477)
Q Consensus 111 ~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y-~~~~---~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~ 186 (477)
...+++|+|+.+.=..+...|...|..|++....- .... ..+... +.++..+++|-. +.+.+++++++..
T Consensus 8 ~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~-~~~~~~~~~D~~-----~~~~i~~~~~~~~ 81 (254)
T PRK06114 8 GQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAA-GRRAIQIAADVT-----SKADLRAAVARTE 81 (254)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc-CCceEEEEcCCC-----CHHHHHHHHHHHH
Confidence 34567776665555566667888887777664321 1112 223323 556666666532 5677888777665
Q ss_pred HhCCCeeEEEEe
Q 011801 187 EASINIKGLIIT 198 (477)
Q Consensus 187 ~~~~~~k~vii~ 198 (477)
+.-.++..++.+
T Consensus 82 ~~~g~id~li~~ 93 (254)
T PRK06114 82 AELGALTLAVNA 93 (254)
T ss_pred HHcCCCCEEEEC
Confidence 554567765543
No 450
>PRK07024 short chain dehydrogenase; Provisional
Probab=60.57 E-value=1.3e+02 Score=28.07 Aligned_cols=79 Identities=15% Similarity=0.125 Sum_probs=45.3
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhh--CCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCC
Q 011801 113 RIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWR--TGVQIVPVHCDISNNFKITREALEAAYERAQEASI 190 (477)
Q Consensus 113 ~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~--~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~ 190 (477)
.+++|+|++..=..+...|.+.|..|++..-.-.......... .+ ++..+.+|-. +.+.+++++++..+...
T Consensus 4 ~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~-----~~~~i~~~~~~~~~~~g 77 (257)
T PRK07024 4 KVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAA-RVSVYAADVR-----DADALAAAAADFIAAHG 77 (257)
T ss_pred EEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCC-eeEEEEcCCC-----CHHHHHHHHHHHHHhCC
Confidence 5777776655445555667788988887664432222221111 12 5666666542 46788888776655545
Q ss_pred CeeEEEE
Q 011801 191 NIKGLII 197 (477)
Q Consensus 191 ~~k~vii 197 (477)
++.+++.
T Consensus 78 ~id~lv~ 84 (257)
T PRK07024 78 LPDVVIA 84 (257)
T ss_pred CCCEEEE
Confidence 6665443
No 451
>PRK08643 acetoin reductase; Validated
Probab=60.52 E-value=1.2e+02 Score=28.22 Aligned_cols=81 Identities=17% Similarity=0.163 Sum_probs=45.8
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHH---HHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhC
Q 011801 113 RIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDR---DLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEAS 189 (477)
Q Consensus 113 ~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~---~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~ 189 (477)
.+++|+|+...=..+...|++.|..|++..-.-..... .+... +.++..+.+|-. +.+.+++++++..+..
T Consensus 4 ~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~-----~~~~~~~~~~~~~~~~ 77 (256)
T PRK08643 4 VALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKD-GGKAIAVKADVS-----DRDQVFAAVRQVVDTF 77 (256)
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEECCCC-----CHHHHHHHHHHHHHHc
Confidence 35666555544445556677788777665422111111 12222 456666776632 5677888777665555
Q ss_pred CCeeEEEEeC
Q 011801 190 INIKGLIITN 199 (477)
Q Consensus 190 ~~~k~vii~n 199 (477)
.++.+++.+.
T Consensus 78 ~~id~vi~~a 87 (256)
T PRK08643 78 GDLNVVVNNA 87 (256)
T ss_pred CCCCEEEECC
Confidence 5778766554
No 452
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=60.18 E-value=1.2e+02 Score=28.15 Aligned_cols=82 Identities=22% Similarity=0.258 Sum_probs=47.3
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcC-CCccch---HHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHH
Q 011801 112 DRIVMGGGATGANELIMFCLANPGDAFLVPS-PYYAAF---DRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQE 187 (477)
Q Consensus 112 ~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~-P~y~~~---~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~ 187 (477)
..+++|+|+...=..+...|...|..|++.. ..-... ...+... +.++..+++|-. +.+.+.+++++..+
T Consensus 7 ~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~D~~-----~~~~~~~~~~~~~~ 80 (247)
T PRK12935 7 KVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKE-GHDVYAVQADVS-----KVEDANRLVEEAVN 80 (247)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhc-CCeEEEEECCCC-----CHHHHHHHHHHHHH
Confidence 4566666655444455566777888876532 111111 1222223 567777777643 56778888877655
Q ss_pred hCCCeeEEEEeC
Q 011801 188 ASINIKGLIITN 199 (477)
Q Consensus 188 ~~~~~k~vii~n 199 (477)
.-.++++|+.+.
T Consensus 81 ~~~~id~vi~~a 92 (247)
T PRK12935 81 HFGKVDILVNNA 92 (247)
T ss_pred HcCCCCEEEECC
Confidence 545678766553
No 453
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=60.07 E-value=98 Score=28.31 Aligned_cols=128 Identities=20% Similarity=0.246 Sum_probs=66.9
Q ss_pred cHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCC--CeEEEcCCCccchHHH---HhhhCCcEEEE
Q 011801 88 LPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPG--DAFLVPSPYYAAFDRD---LSWRTGVQIVP 162 (477)
Q Consensus 88 ~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~G--d~vlv~~P~y~~~~~~---~~~~~g~~~~~ 162 (477)
..+..+.+.+++...... .+++++|++.+=+++|...+..++..|. +.++.-..+.+..... .....+..+.-
T Consensus 83 i~~s~~~l~~li~~~~~~--~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~~~~~~~~~~~pi~~ 160 (216)
T PF02230_consen 83 IEESAERLDELIDEEVAY--GIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESELEDRPEALAKTPILI 160 (216)
T ss_dssp HHHHHHHHHHHHHHHHHT--T--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCCHCCHCCCCTS-EEE
T ss_pred HHHHHHHHHHHHHHHHHc--CCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccccccccccccCCCcEEE
Confidence 444445555555532211 1678899997767777776666665543 4555555444332211 12121445655
Q ss_pred EeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc
Q 011801 163 VHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDK 223 (477)
Q Consensus 163 v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~ 223 (477)
+.-+.+ --+..+..++..+..++.+.++....+ | -.|..++.++++.+.++.+++
T Consensus 161 ~hG~~D--~vvp~~~~~~~~~~L~~~~~~v~~~~~--~--g~gH~i~~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 161 IHGDED--PVVPFEWAEKTAEFLKAAGANVEFHEY--P--GGGHEISPEELRDLREFLEKH 215 (216)
T ss_dssp EEETT---SSSTHHHHHHHHHHHHCTT-GEEEEEE--T--T-SSS--HHHHHHHHHHHHHH
T ss_pred EecCCC--CcccHHHHHHHHHHHHhcCCCEEEEEc--C--CCCCCCCHHHHHHHHHHHhhh
Confidence 555432 245666666666655555554543332 2 188889999999999998753
No 454
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex). SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases.
Probab=59.54 E-value=11 Score=37.43 Aligned_cols=68 Identities=15% Similarity=0.223 Sum_probs=46.6
Q ss_pred HHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEE
Q 011801 150 RDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLV 228 (477)
Q Consensus 150 ~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI 228 (477)
..+... +.++..+.+..+.+|.+..+.+.+.-.. +. . .....+.|-.++.+++++|++.|+++||-||
T Consensus 25 d~ma~~-KlN~lhlHLtD~~~~rle~~~~P~lt~~----ga-----~-~~~~~~~~~~YT~~di~elv~yA~~rgI~vI 92 (329)
T cd06568 25 DLLALY-KLNVLHLHLTDDQGWRIEIKSWPKLTEI----GG-----S-TEVGGGPGGYYTQEDYKDIVAYAAERHITVV 92 (329)
T ss_pred HHHHHh-CCcEEEEEeecCCcceeeecCccccccc----cc-----c-cccCCCCCCcCCHHHHHHHHHHHHHcCCEEE
Confidence 334444 8888888887777888766555433211 10 0 1112456778999999999999999999888
No 455
>PRK06128 oxidoreductase; Provisional
Probab=59.31 E-value=99 Score=29.92 Aligned_cols=100 Identities=11% Similarity=0.144 Sum_probs=55.1
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCcc-----chHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHH
Q 011801 112 DRIVMGGGATGANELIMFCLANPGDAFLVPSPYYA-----AFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQ 186 (477)
Q Consensus 112 ~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~-----~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~ 186 (477)
..+++|+|+...=..+...|+..|..|++....-. .....++.. |.++..+++|-. +.+.+++++++..
T Consensus 56 k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~-----~~~~v~~~~~~~~ 129 (300)
T PRK06128 56 RKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAE-GRKAVALPGDLK-----DEAFCRQLVERAV 129 (300)
T ss_pred CEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHc-CCeEEEEecCCC-----CHHHHHHHHHHHH
Confidence 45777776655555666677788888776432111 111222323 667777777642 5677888777665
Q ss_pred HhCCCeeEEEEeCCCC--Ccc--cCCCHHHHHHHHH
Q 011801 187 EASINIKGLIITNPSN--PLG--TTLDRDTLKSLVS 218 (477)
Q Consensus 187 ~~~~~~k~vii~nP~N--PtG--~~~~~~~l~~l~~ 218 (477)
+.-.++.+|+ .|... +.+ .-++.+++++..+
T Consensus 130 ~~~g~iD~lV-~nAg~~~~~~~~~~~~~~~~~~~~~ 164 (300)
T PRK06128 130 KELGGLDILV-NIAGKQTAVKDIADITTEQFDATFK 164 (300)
T ss_pred HHhCCCCEEE-ECCcccCCCCChhhCCHHHHHHHHH
Confidence 5445677654 43321 111 1235556665555
No 456
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=59.23 E-value=1.5e+02 Score=27.32 Aligned_cols=101 Identities=20% Similarity=0.264 Sum_probs=53.3
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchH---HHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHh
Q 011801 112 DRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFD---RDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEA 188 (477)
Q Consensus 112 ~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~---~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~ 188 (477)
..+++|+|+...=..+...|+..|-.|++..-.-.... ..+... +.++..+.+|-. +.+.+++++++..+.
T Consensus 8 ~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~-----~~~~~~~~~~~~~~~ 81 (239)
T PRK07666 8 KNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAY-GVKVVIATADVS-----DYEEVTAAIEQLKNE 81 (239)
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh-CCeEEEEECCCC-----CHHHHHHHHHHHHHH
Confidence 34666665544444455556777877766543211111 122222 556666666532 477788877765544
Q ss_pred CCCeeEEEEeCCCCCcccC--CCHHHHHHHHH
Q 011801 189 SINIKGLIITNPSNPLGTT--LDRDTLKSLVS 218 (477)
Q Consensus 189 ~~~~k~vii~nP~NPtG~~--~~~~~l~~l~~ 218 (477)
-.++.+|+.+....+.+.. .+.+++++..+
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~ 113 (239)
T PRK07666 82 LGSIDILINNAGISKFGKFLELDPAEWEKIIQ 113 (239)
T ss_pred cCCccEEEEcCccccCCCcccCCHHHHHHHHH
Confidence 4567776665444433322 24445544433
No 457
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=59.04 E-value=52 Score=29.29 Aligned_cols=78 Identities=19% Similarity=0.229 Sum_probs=51.0
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCeEE-EcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCe
Q 011801 114 IVMGGGATGANELIMFCLANPGDAFL-VPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINI 192 (477)
Q Consensus 114 i~~t~G~t~al~~i~~~l~~~Gd~vl-v~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~ 192 (477)
-++|.|+++.=.....-|.+.|..++ ..-|.-.+- ..++.. |-+++..|.+-. ..+++..++.+++..=.+.
T Consensus 12 alvtggasglg~ataerlakqgasv~lldlp~skg~-~vakel-g~~~vf~padvt-----sekdv~aala~ak~kfgrl 84 (260)
T KOG1199|consen 12 ALVTGGASGLGKATAERLAKQGASVALLDLPQSKGA-DVAKEL-GGKVVFTPADVT-----SEKDVRAALAKAKAKFGRL 84 (260)
T ss_pred EEeecCcccccHHHHHHHHhcCceEEEEeCCcccch-HHHHHh-CCceEEeccccC-----cHHHHHHHHHHHHhhccce
Confidence 45677777766667777888886555 455655544 445666 888888876532 3577888887776555566
Q ss_pred eEEEEe
Q 011801 193 KGLIIT 198 (477)
Q Consensus 193 k~vii~ 198 (477)
.+.+-|
T Consensus 85 d~~vnc 90 (260)
T KOG1199|consen 85 DALVNC 90 (260)
T ss_pred eeeeec
Confidence 655443
No 458
>PRK12937 short chain dehydrogenase; Provisional
Probab=58.85 E-value=1.2e+02 Score=27.95 Aligned_cols=82 Identities=22% Similarity=0.240 Sum_probs=47.7
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEc-CCCccc---hHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHH
Q 011801 111 PDRIVMGGGATGANELIMFCLANPGDAFLVP-SPYYAA---FDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQ 186 (477)
Q Consensus 111 ~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~-~P~y~~---~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~ 186 (477)
...+++|.|+...=..+...|.+.|-.+++. ...-.. ....+... +.++..+.+|-. +.+.+++++++..
T Consensus 5 ~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~-----~~~~~~~~~~~~~ 78 (245)
T PRK12937 5 NKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAA-GGRAIAVQADVA-----DAAAVTRLFDAAE 78 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhc-CCeEEEEECCCC-----CHHHHHHHHHHHH
Confidence 3457777776655556667778888766543 222111 11222233 666777776642 5677888887665
Q ss_pred HhCCCeeEEEEe
Q 011801 187 EASINIKGLIIT 198 (477)
Q Consensus 187 ~~~~~~k~vii~ 198 (477)
+...++.+++.+
T Consensus 79 ~~~~~id~vi~~ 90 (245)
T PRK12937 79 TAFGRIDVLVNN 90 (245)
T ss_pred HHcCCCCEEEEC
Confidence 554567766544
No 459
>TIGR00683 nanA N-acetylneuraminate lyase. N-acetylneuraminate lyase is also known as N-acetylneuraminic acid aldolase, sialic acid aldolase, or sialate lyase. It is an intracellular enzyme. The structure of this homotetrameric enzyme related to dihydrodipicolinate synthase is known. In Clostridium tertium, the enzyme appears to be in an operon with a secreted sialidase that releases sialic acid from host sialoglycoconjugates. In several E. coli strains, however, this enzyme is responsible for N-acetyl-D-neuraminic acid synthesis for capsule production by condensing N-acetyl-D-mannosamine and pyruvate.
Probab=58.76 E-value=1.8e+02 Score=28.24 Aligned_cols=88 Identities=16% Similarity=0.253 Sum_probs=50.4
Q ss_pred EEEeCC---hHHHHHHHHHHhcCCC-CeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhC
Q 011801 114 IVMGGG---ATGANELIMFCLANPG-DAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEAS 189 (477)
Q Consensus 114 i~~t~G---~t~al~~i~~~l~~~G-d~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~ 189 (477)
|++..| ..++++++-.+ .+-| |.|++..|+|.... .+++.+.+++..+..
T Consensus 73 vi~gv~~~~t~~~i~la~~a-~~~Gad~v~v~~P~y~~~~-------------------------~~~i~~yf~~v~~~~ 126 (290)
T TIGR00683 73 LIAQVGSVNLKEAVELGKYA-TELGYDCLSAVTPFYYKFS-------------------------FPEIKHYYDTIIAET 126 (290)
T ss_pred EEEecCCCCHHHHHHHHHHH-HHhCCCEEEEeCCcCCCCC-------------------------HHHHHHHHHHHHhhC
Confidence 566544 34455544333 3334 88999888875331 123333333322222
Q ss_pred CCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEecc
Q 011801 190 INIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDE 231 (477)
Q Consensus 190 ~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De 231 (477)
.+...++.++|. .||..++.+.+.+|++ .-|+.-|=|.
T Consensus 127 ~~lpv~lYn~P~-~tg~~l~~~~i~~L~~---~pnv~giK~s 164 (290)
T TIGR00683 127 GGLNMIVYSIPF-LTGVNMGIEQFGELYK---NPKVLGVKFT 164 (290)
T ss_pred CCCCEEEEeCcc-ccccCcCHHHHHHHhc---CCCEEEEEeC
Confidence 245667777663 3899999888887764 3577766664
No 460
>cd06569 GH20_Sm-chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=58.58 E-value=17 Score=37.86 Aligned_cols=78 Identities=9% Similarity=0.223 Sum_probs=48.7
Q ss_pred HHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCee--EEEE----eCCC--CCcccCCCHHHHHHHHHHHH
Q 011801 150 RDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIK--GLII----TNPS--NPLGTTLDRDTLKSLVSFIN 221 (477)
Q Consensus 150 ~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k--~vii----~nP~--NPtG~~~~~~~l~~l~~~~~ 221 (477)
..+... +.++..+++..+.+|.+..+.+.+.-+.....+.... ..+. ..|. .+.|-.++.+++++|++.|+
T Consensus 29 d~ma~~-K~N~lHlHLtDdqgwriei~~~P~Lt~~ga~r~~~~~~~~~~~~~~~~~~~~~~~~~g~YT~~di~eiv~yA~ 107 (445)
T cd06569 29 DQMAAY-KLNKLHLHLTDDEGWRLEIPGLPELTEVGAKRCHDLSETTCLLPQLGSGPDTNNSGSGYYSRADYIEILKYAK 107 (445)
T ss_pred HHHHHh-CCceEEEEeecCCCcceeccCCchhhhcccccccccccccccccccccCcccCcccCCccCHHHHHHHHHHHH
Confidence 344445 8888889887778898887666554332111000000 0011 1111 24466899999999999999
Q ss_pred hcCeEEE
Q 011801 222 DKNIHLV 228 (477)
Q Consensus 222 ~~~~~lI 228 (477)
++||-||
T Consensus 108 ~rgI~VI 114 (445)
T cd06569 108 ARHIEVI 114 (445)
T ss_pred HcCCEEE
Confidence 9999887
No 461
>COG2984 ABC-type uncharacterized transport system, periplasmic component [General function prediction only]
Probab=58.56 E-value=1.6e+02 Score=28.99 Aligned_cols=127 Identities=14% Similarity=0.155 Sum_probs=70.4
Q ss_pred ccCCCCCcHHHHHHHHHHHhcccCCCCccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEc---CCCccchHHHHhhhCC
Q 011801 81 IFQDYHGLPEFRQAVAKFMGKGRGGRVTFDPDRIVMGGGATGANELIMFCLANPGDAFLVP---SPYYAAFDRDLSWRTG 157 (477)
Q Consensus 81 ~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~---~P~y~~~~~~~~~~~g 157 (477)
.|...+|....-..+++-+.. +..+++++-++..|-.++ ....+ --|++. +|-=......++.- |
T Consensus 66 ~~~na~~~~~~a~~iarql~~--------~~~dviv~i~tp~Aq~~~-s~~~~--iPVV~aavtd~v~a~Lv~~~~~p-g 133 (322)
T COG2984 66 DYQNAQGDLGTAAQIARQLVG--------DKPDVIVAIATPAAQALV-SATKT--IPVVFAAVTDPVGAKLVKSLEQP-G 133 (322)
T ss_pred EeecCCCChHHHHHHHHHhhc--------CCCcEEEecCCHHHHHHH-HhcCC--CCEEEEccCchhhccCCccccCC-C
Confidence 466667777777777776652 344677776666554433 33322 223332 23222222223322 5
Q ss_pred cEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEE-EEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEeccc
Q 011801 158 VQIVPVHCDISNNFKITREALEAAYERAQEASINIKGL-IITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEI 232 (477)
Q Consensus 158 ~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~v-ii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~ 232 (477)
..+..+. | ..+.++--++++. --++.|-| ++.||+ -..+...++++...+++.|+-|++=-+
T Consensus 134 ~NvTGvs-D-----~~~v~q~i~lik~---~~Pnak~Igv~Y~p~----E~ns~~l~eelk~~A~~~Gl~vve~~v 196 (322)
T COG2984 134 GNVTGVS-D-----LLPVAQQIELIKA---LLPNAKSIGVLYNPG----EANSVSLVEELKKEARKAGLEVVEAAV 196 (322)
T ss_pred CceeecC-C-----cchHHHHHHHHHH---hCCCCeeEEEEeCCC----CcccHHHHHHHHHHHHHCCCEEEEEec
Confidence 5555553 1 1233333333333 23466666 778884 335677899999999999999985443
No 462
>smart00642 Aamy Alpha-amylase domain.
Probab=58.50 E-value=41 Score=29.77 Aligned_cols=26 Identities=19% Similarity=0.362 Sum_probs=23.9
Q ss_pred CHHHHHHHHHHHHhcCeEEEeccccc
Q 011801 209 DRDTLKSLVSFINDKNIHLVCDEIYA 234 (477)
Q Consensus 209 ~~~~l~~l~~~~~~~~~~lI~De~y~ 234 (477)
+.++++++++.|+++|+.||.|-+..
T Consensus 68 t~~d~~~lv~~~h~~Gi~vilD~V~N 93 (166)
T smart00642 68 TMEDFKELVDAAHARGIKVILDVVIN 93 (166)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 56899999999999999999998875
No 463
>PRK06484 short chain dehydrogenase; Validated
Probab=58.41 E-value=93 Score=32.82 Aligned_cols=80 Identities=16% Similarity=0.189 Sum_probs=48.2
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCC
Q 011801 112 DRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASIN 191 (477)
Q Consensus 112 ~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~ 191 (477)
..+++|.|+.+.=..+...|.+.|..|++..-.-.......+.. |.++..+.+|-. +.++++++++...+...+
T Consensus 6 k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~g~ 79 (520)
T PRK06484 6 RVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL-GPDHHALAMDVS-----DEAQIREGFEQLHREFGR 79 (520)
T ss_pred eEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCceeEEEeccC-----CHHHHHHHHHHHHHHhCC
Confidence 34666666665555566778888988776643333333333333 666666666532 567888888776555456
Q ss_pred eeEEEE
Q 011801 192 IKGLII 197 (477)
Q Consensus 192 ~k~vii 197 (477)
+..++.
T Consensus 80 iD~li~ 85 (520)
T PRK06484 80 IDVLVN 85 (520)
T ss_pred CCEEEE
Confidence 775443
No 464
>cd00952 CHBPH_aldolase Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (HBPHA) and trans-2'-carboxybenzalpyruvate hydratase-aldolase (CBPHA). HBPHA catalyzes HBP to salicyaldehyde and pyruvate. This reaction is part of the degradative pathways for naphthalene and naphthalenesulfonates by bacteria. CBPHA is homologous to HBPHA and catalyzes the cleavage of CBP to 2-carboxylbenzaldehyde and pyruvate during the degradation of phenanthrene. They are member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=58.35 E-value=1.4e+02 Score=29.25 Aligned_cols=89 Identities=16% Similarity=0.174 Sum_probs=51.6
Q ss_pred EEEeCC---hHHHHHHHHHHhcCCC-CeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhC
Q 011801 114 IVMGGG---ATGANELIMFCLANPG-DAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEAS 189 (477)
Q Consensus 114 i~~t~G---~t~al~~i~~~l~~~G-d~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~ 189 (477)
|++..| ..++++.+-.+- +-| |.|++..|+|.... .+++.+.+++..+..
T Consensus 80 vi~Gv~~~~t~~ai~~a~~A~-~~Gad~vlv~~P~y~~~~-------------------------~~~l~~yf~~va~a~ 133 (309)
T cd00952 80 VFVGATTLNTRDTIARTRALL-DLGADGTMLGRPMWLPLD-------------------------VDTAVQFYRDVAEAV 133 (309)
T ss_pred EEEEeccCCHHHHHHHHHHHH-HhCCCEEEECCCcCCCCC-------------------------HHHHHHHHHHHHHhC
Confidence 566444 456666554443 334 89999999874321 122333333322222
Q ss_pred CCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEeccc
Q 011801 190 INIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEI 232 (477)
Q Consensus 190 ~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~ 232 (477)
++..+++.++| ..||..++.+.+++|++ --|+.=|=|..
T Consensus 134 ~~lPv~iYn~P-~~tg~~l~~~~l~~L~~---~pnivgiKdss 172 (309)
T cd00952 134 PEMAIAIYANP-EAFKFDFPRAAWAELAQ---IPQVVAAKYLG 172 (309)
T ss_pred CCCcEEEEcCc-hhcCCCCCHHHHHHHhc---CCCEEEEEecC
Confidence 13566777766 55899999888777753 34777666653
No 465
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=58.12 E-value=60 Score=30.60 Aligned_cols=81 Identities=12% Similarity=0.132 Sum_probs=45.1
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCC
Q 011801 111 PDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASI 190 (477)
Q Consensus 111 ~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~ 190 (477)
...+++|.|+...=..+...|.+.|-.|++..-.-.......... +.++..+++|-. +.+.+++++++..+...
T Consensus 6 ~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~g 79 (263)
T PRK06200 6 GQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF-GDHVLVVEGDVT-----SYADNQRAVDQTVDAFG 79 (263)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCcceEEEccCC-----CHHHHHHHHHHHHHhcC
Confidence 345667666554444556667788887776654322222222222 444555565532 46777777776555445
Q ss_pred CeeEEEE
Q 011801 191 NIKGLII 197 (477)
Q Consensus 191 ~~k~vii 197 (477)
++.+++.
T Consensus 80 ~id~li~ 86 (263)
T PRK06200 80 KLDCFVG 86 (263)
T ss_pred CCCEEEE
Confidence 6775443
No 466
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=58.06 E-value=1.8e+02 Score=28.20 Aligned_cols=82 Identities=21% Similarity=0.172 Sum_probs=47.5
Q ss_pred cCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccc-h---HHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHH
Q 011801 109 FDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAA-F---DRDLSWRTGVQIVPVHCDISNNFKITREALEAAYER 184 (477)
Q Consensus 109 ~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~-~---~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~ 184 (477)
++...+++|.|+...=..+...|++.|..|++.+..... . ...++.. |.++..+.+|-. +.+.+++.+++
T Consensus 10 l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~-g~~~~~~~~Dv~-----d~~~~~~~~~~ 83 (306)
T PRK07792 10 LSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAA-GAKAVAVAGDIS-----QRATADELVAT 83 (306)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhc-CCeEEEEeCCCC-----CHHHHHHHHHH
Confidence 334456666665544455556778889888876533221 1 1222223 667777777642 56777777776
Q ss_pred HHHhCCCeeEEEE
Q 011801 185 AQEASINIKGLII 197 (477)
Q Consensus 185 ~~~~~~~~k~vii 197 (477)
..+ -.++.+++.
T Consensus 84 ~~~-~g~iD~li~ 95 (306)
T PRK07792 84 AVG-LGGLDIVVN 95 (306)
T ss_pred HHH-hCCCCEEEE
Confidence 554 346776543
No 467
>PRK08263 short chain dehydrogenase; Provisional
Probab=57.85 E-value=1.2e+02 Score=28.72 Aligned_cols=100 Identities=16% Similarity=0.167 Sum_probs=50.0
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCe
Q 011801 113 RIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINI 192 (477)
Q Consensus 113 ~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~ 192 (477)
.+++|+|+...=..+...|.+.|..|++..-.-.......... +.++..+.+|-. +.+.+++.+++..+.-.++
T Consensus 5 ~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~~~~ 78 (275)
T PRK08263 5 VWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY-GDRLLPLALDVT-----DRAAVFAAVETAVEHFGRL 78 (275)
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc-cCCeeEEEccCC-----CHHHHHHHHHHHHHHcCCC
Confidence 4666665544444555667778877776543322222222222 334445555432 4677777776654444466
Q ss_pred eEEEEeCCCCCccc--CCCHHHHHHHHH
Q 011801 193 KGLIITNPSNPLGT--TLDRDTLKSLVS 218 (477)
Q Consensus 193 k~vii~nP~NPtG~--~~~~~~l~~l~~ 218 (477)
.+|+.+--....+. -.+.+++++..+
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~ 106 (275)
T PRK08263 79 DIVVNNAGYGLFGMIEEVTESEARAQID 106 (275)
T ss_pred CEEEECCCCccccccccCCHHHHHHHHH
Confidence 76554433222222 234455555444
No 468
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=57.85 E-value=1.4e+02 Score=27.42 Aligned_cols=101 Identities=18% Similarity=0.202 Sum_probs=59.8
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCC-cEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCe
Q 011801 114 IVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTG-VQIVPVHCDISNNFKITREALEAAYERAQEASINI 192 (477)
Q Consensus 114 i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g-~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~ 192 (477)
.++|.|+++-=..+.+.|.+.|-+|++.+-.-..-...++...| ..-..+.||-+ +..++...+++..++-..+
T Consensus 17 ~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS-----~a~~v~~~l~e~~k~~g~p 91 (256)
T KOG1200|consen 17 AAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVS-----KAHDVQNTLEEMEKSLGTP 91 (256)
T ss_pred eEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccC-----cHHHHHHHHHHHHHhcCCC
Confidence 45566666656667778899999999988766555555554422 13344445432 2445555555555554466
Q ss_pred eEEEEeCCCCCcccC--CCHHHHHHHHHH
Q 011801 193 KGLIITNPSNPLGTT--LDRDTLKSLVSF 219 (477)
Q Consensus 193 k~vii~nP~NPtG~~--~~~~~l~~l~~~ 219 (477)
..++-|---+-.+.. +..++|..++..
T Consensus 92 svlVncAGItrD~~Llrmkq~qwd~vi~v 120 (256)
T KOG1200|consen 92 SVLVNCAGITRDGLLLRMKQEQWDSVIAV 120 (256)
T ss_pred cEEEEcCccccccceeeccHHHHHHHHHh
Confidence 654444334555554 577778887764
No 469
>PRK09242 tropinone reductase; Provisional
Probab=57.83 E-value=1.6e+02 Score=27.40 Aligned_cols=102 Identities=13% Similarity=0.110 Sum_probs=53.5
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhh----hCCcEEEEEeccCCCCcccCHHHHHHHHHHHHH
Q 011801 112 DRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSW----RTGVQIVPVHCDISNNFKITREALEAAYERAQE 187 (477)
Q Consensus 112 ~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~----~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~ 187 (477)
..+++|+|+...=..+...|.+.|-.|++..-.-......... ..+.++..+.+|-. +.+++++++++..+
T Consensus 10 k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~~ 84 (257)
T PRK09242 10 QTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVS-----DDEDRRAILDWVED 84 (257)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCC-----CHHHHHHHHHHHHH
Confidence 3466665544444445556777888877765432222221111 11456777777642 56777777776655
Q ss_pred hCCCeeEEEEeCCCCCcc--cCCCHHHHHHHHH
Q 011801 188 ASINIKGLIITNPSNPLG--TTLDRDTLKSLVS 218 (477)
Q Consensus 188 ~~~~~k~vii~nP~NPtG--~~~~~~~l~~l~~ 218 (477)
.-.++.+|+.+...+..+ ...+.+++++..+
T Consensus 85 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~ 117 (257)
T PRK09242 85 HWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFE 117 (257)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHh
Confidence 545677766543322211 1234455554443
No 470
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=57.74 E-value=1.3e+02 Score=27.90 Aligned_cols=79 Identities=16% Similarity=0.184 Sum_probs=42.0
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCee
Q 011801 114 IVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIK 193 (477)
Q Consensus 114 i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k 193 (477)
+++|+|+...=..+...|.+.|..|++..-.-.......... +.++..+.+|-. +.+.++++++...+...++.
T Consensus 3 vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dl~-----~~~~i~~~~~~~~~~~~~id 76 (248)
T PRK10538 3 VLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-GDNLYIAQLDVR-----NRAAIEEMLASLPAEWRNID 76 (248)
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-ccceEEEEecCC-----CHHHHHHHHHHHHHHcCCCC
Confidence 566655443334445566778877776543322222222222 445555665532 46777777766554444677
Q ss_pred EEEEe
Q 011801 194 GLIIT 198 (477)
Q Consensus 194 ~vii~ 198 (477)
+++.+
T Consensus 77 ~vi~~ 81 (248)
T PRK10538 77 VLVNN 81 (248)
T ss_pred EEEEC
Confidence 65543
No 471
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in
Probab=57.51 E-value=16 Score=36.68 Aligned_cols=63 Identities=10% Similarity=0.267 Sum_probs=45.5
Q ss_pred HHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEE
Q 011801 150 RDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLV 228 (477)
Q Consensus 150 ~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI 228 (477)
..+... +.++..+++..+.+|.+..+.+.+.-+. + ....|-.++++++++|++.|+++||-||
T Consensus 25 d~ma~~-KlN~lh~HltDd~~~rle~~~~P~Lt~~----g-----------a~~~~~~YT~~di~eiv~yA~~rgI~vI 87 (348)
T cd06562 25 DAMAYN-KLNVLHWHITDSQSFPLESPSYPELSKK----G-----------AYSPSEVYTPEDVKEIVEYARLRGIRVI 87 (348)
T ss_pred HHHHHh-CCcEEEEeEEcCCCceEeeCCCchhhhc----c-----------CcCCCceECHHHHHHHHHHHHHcCCEEE
Confidence 334444 8888888887677888876665543221 1 1134678999999999999999999888
No 472
>PRK06482 short chain dehydrogenase; Provisional
Probab=57.45 E-value=1.2e+02 Score=28.69 Aligned_cols=80 Identities=19% Similarity=0.163 Sum_probs=43.6
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCe
Q 011801 113 RIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINI 192 (477)
Q Consensus 113 ~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~ 192 (477)
.+++|+|+...=..+...|.+.|..|.+..-............ +.++..+.+|-. |.+.+++++++..+...++
T Consensus 4 ~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~~~i 77 (276)
T PRK06482 4 TWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY-GDRLWVLQLDVT-----DSAAVRAVVDRAFAALGRI 77 (276)
T ss_pred EEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-cCceEEEEccCC-----CHHHHHHHHHHHHHHcCCC
Confidence 3677766554444555667788888777554332222222222 334444555432 4677777776654444466
Q ss_pred eEEEEe
Q 011801 193 KGLIIT 198 (477)
Q Consensus 193 k~vii~ 198 (477)
..|+.+
T Consensus 78 d~vi~~ 83 (276)
T PRK06482 78 DVVVSN 83 (276)
T ss_pred CEEEEC
Confidence 765554
No 473
>PRK06179 short chain dehydrogenase; Provisional
Probab=57.34 E-value=1.5e+02 Score=27.93 Aligned_cols=95 Identities=16% Similarity=0.140 Sum_probs=51.2
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCe
Q 011801 113 RIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINI 192 (477)
Q Consensus 113 ~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~ 192 (477)
.+++|+|+...=..+...|.+.|..|++....-.. .....++.++..++. |.+.++++++...+...++
T Consensus 6 ~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~----~~~~~~~~~~~~D~~-------d~~~~~~~~~~~~~~~g~~ 74 (270)
T PRK06179 6 VALVTGASSGIGRATAEKLARAGYRVFGTSRNPAR----AAPIPGVELLELDVT-------DDASVQAAVDEVIARAGRI 74 (270)
T ss_pred EEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhh----ccccCCCeeEEeecC-------CHHHHHHHHHHHHHhCCCC
Confidence 46666655444444556677888887766543211 111125555444432 5778888887765555567
Q ss_pred eEEEEeCCCCCccc--CCCHHHHHHHHH
Q 011801 193 KGLIITNPSNPLGT--TLDRDTLKSLVS 218 (477)
Q Consensus 193 k~vii~nP~NPtG~--~~~~~~l~~l~~ 218 (477)
.+|+.+.-..+.|. ..+.++++.+.+
T Consensus 75 d~li~~ag~~~~~~~~~~~~~~~~~~~~ 102 (270)
T PRK06179 75 DVLVNNAGVGLAGAAEESSIAQAQALFD 102 (270)
T ss_pred CEEEECCCCCCCcCcccCCHHHHHHHHH
Confidence 76555433333332 234555555554
No 474
>PRK07856 short chain dehydrogenase; Provisional
Probab=57.31 E-value=1.5e+02 Score=27.57 Aligned_cols=77 Identities=14% Similarity=0.139 Sum_probs=44.0
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCC
Q 011801 111 PDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASI 190 (477)
Q Consensus 111 ~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~ 190 (477)
...+++|.|+...=..+...|++.|..|++..-.-.. ... +.++..+.+|-. +.++++++++...+...
T Consensus 6 ~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~-----~~~-~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~~ 74 (252)
T PRK07856 6 GRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE-----TVD-GRPAEFHAADVR-----DPDQVAALVDAIVERHG 74 (252)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh-----hhc-CCceEEEEccCC-----CHHHHHHHHHHHHHHcC
Confidence 3456666665544455566777788777766533211 112 444555555432 46777777776655545
Q ss_pred CeeEEEEe
Q 011801 191 NIKGLIIT 198 (477)
Q Consensus 191 ~~k~vii~ 198 (477)
++.+|+.+
T Consensus 75 ~id~vi~~ 82 (252)
T PRK07856 75 RLDVLVNN 82 (252)
T ss_pred CCCEEEEC
Confidence 67766554
No 475
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=57.28 E-value=1.7e+02 Score=27.36 Aligned_cols=82 Identities=20% Similarity=0.190 Sum_probs=47.6
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCcc-chHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCC
Q 011801 112 DRIVMGGGATGANELIMFCLANPGDAFLVPSPYYA-AFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASI 190 (477)
Q Consensus 112 ~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~-~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~ 190 (477)
..+++|+|+.+.=..+...|.+.|-.|+..+..-. .....+... +.++..+++|-. |.+.+++++++..+...
T Consensus 11 k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~-----~~~~~~~~~~~~~~~~~ 84 (253)
T PRK08993 11 KVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTAL-GRRFLSLTADLR-----KIDGIPALLERAVAEFG 84 (253)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhc-CCeEEEEECCCC-----CHHHHHHHHHHHHHHhC
Confidence 35666666655545566778888988776543211 111222223 556666776532 57788888877665555
Q ss_pred CeeEEEEeCC
Q 011801 191 NIKGLIITNP 200 (477)
Q Consensus 191 ~~k~vii~nP 200 (477)
++.+++ .|+
T Consensus 85 ~~D~li-~~A 93 (253)
T PRK08993 85 HIDILV-NNA 93 (253)
T ss_pred CCCEEE-ECC
Confidence 677544 444
No 476
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=57.18 E-value=1.8e+02 Score=28.67 Aligned_cols=62 Identities=16% Similarity=0.198 Sum_probs=43.6
Q ss_pred CcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEEeccccc
Q 011801 170 NFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLVCDEIYA 234 (477)
Q Consensus 170 ~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI~De~y~ 234 (477)
+..++.+++++.++.....=.+...|+ -+-|=|.| ++.+...+|++.|++.+..+++|-.-.
T Consensus 108 Gp~is~~~~~~~l~~~~~~l~~~d~Vv-lsGSlP~g--~~~d~y~~li~~~~~~g~~vilD~Sg~ 169 (310)
T COG1105 108 GPEISEAELEQFLEQLKALLESDDIVV-LSGSLPPG--VPPDAYAELIRILRQQGAKVILDTSGE 169 (310)
T ss_pred CCCCCHHHHHHHHHHHHHhcccCCEEE-EeCCCCCC--CCHHHHHHHHHHHHhcCCeEEEECChH
Confidence 567888888887776544222334444 44455666 557789999999999999999997543
No 477
>PRK12743 oxidoreductase; Provisional
Probab=57.01 E-value=1.2e+02 Score=28.40 Aligned_cols=80 Identities=14% Similarity=0.084 Sum_probs=46.6
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcC-CCccch---HHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHh
Q 011801 113 RIVMGGGATGANELIMFCLANPGDAFLVPS-PYYAAF---DRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEA 188 (477)
Q Consensus 113 ~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~-P~y~~~---~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~ 188 (477)
.+++|+|+...=..+...|++.|-.|++.. ..-... ...++.. |.++..+.+|-. +.+.+++++++..+.
T Consensus 4 ~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~-----~~~~~~~~~~~~~~~ 77 (256)
T PRK12743 4 VAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSH-GVRAEIRQLDLS-----DLPEGAQALDKLIQR 77 (256)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc-CCceEEEEccCC-----CHHHHHHHHHHHHHH
Confidence 467777666555566677888898886642 222211 1222223 656666666532 567777777766555
Q ss_pred CCCeeEEEEe
Q 011801 189 SINIKGLIIT 198 (477)
Q Consensus 189 ~~~~k~vii~ 198 (477)
..++.+|+.+
T Consensus 78 ~~~id~li~~ 87 (256)
T PRK12743 78 LGRIDVLVNN 87 (256)
T ss_pred cCCCCEEEEC
Confidence 4567765544
No 478
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=56.96 E-value=66 Score=30.33 Aligned_cols=81 Identities=22% Similarity=0.222 Sum_probs=44.0
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCC
Q 011801 111 PDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASI 190 (477)
Q Consensus 111 ~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~ 190 (477)
...+++|.|+...=..+...|.+.|..|++..-.-.......... +.++..+.+|-. +.+.+++++++..+.-.
T Consensus 5 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~-~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~g 78 (262)
T TIGR03325 5 GEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAH-GDAVVGVEGDVR-----SLDDHKEAVARCVAAFG 78 (262)
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhc-CCceEEEEeccC-----CHHHHHHHHHHHHHHhC
Confidence 345666666554444455677888988887643322222222222 445555665532 45667777766544444
Q ss_pred CeeEEEE
Q 011801 191 NIKGLII 197 (477)
Q Consensus 191 ~~k~vii 197 (477)
++..++.
T Consensus 79 ~id~li~ 85 (262)
T TIGR03325 79 KIDCLIP 85 (262)
T ss_pred CCCEEEE
Confidence 6665443
No 479
>PRK06484 short chain dehydrogenase; Validated
Probab=56.26 E-value=1.1e+02 Score=32.42 Aligned_cols=79 Identities=22% Similarity=0.267 Sum_probs=45.2
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCe
Q 011801 113 RIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINI 192 (477)
Q Consensus 113 ~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~ 192 (477)
.+++|.|+.+.=..+...|.+.|..|++..-.-.......... +.++..+.+|-. |.+.+++++++..+...++
T Consensus 271 ~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~g~i 344 (520)
T PRK06484 271 VVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL-GDEHLSVQADIT-----DEAAVESAFAQIQARWGRL 344 (520)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCceeEEEccCC-----CHHHHHHHHHHHHHHcCCC
Confidence 4555555544444455667888888877654433333333333 556655666532 5677887777665554567
Q ss_pred eEEEE
Q 011801 193 KGLII 197 (477)
Q Consensus 193 k~vii 197 (477)
.+++.
T Consensus 345 d~li~ 349 (520)
T PRK06484 345 DVLVN 349 (520)
T ss_pred CEEEE
Confidence 75543
No 480
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=55.87 E-value=1.5e+02 Score=27.72 Aligned_cols=81 Identities=15% Similarity=0.066 Sum_probs=47.3
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHh---hhCC-cEEEEEeccCCCCcccCHHHHHHHHHHHHHh
Q 011801 113 RIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLS---WRTG-VQIVPVHCDISNNFKITREALEAAYERAQEA 188 (477)
Q Consensus 113 ~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~---~~~g-~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~ 188 (477)
.+++|+|+...=..+...|.+.|..|++............. ...+ .++..+.+|-. +.++++.++++..+.
T Consensus 4 ~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~i~~~~~~~~~~ 78 (259)
T PRK12384 4 VAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADAT-----SEQSVLALSRGVDEI 78 (259)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCC-----CHHHHHHHHHHHHHH
Confidence 47777776655555666777888777776554433222221 1112 45666776643 467777777766554
Q ss_pred CCCeeEEEEe
Q 011801 189 SINIKGLIIT 198 (477)
Q Consensus 189 ~~~~k~vii~ 198 (477)
..++.+++.+
T Consensus 79 ~~~id~vv~~ 88 (259)
T PRK12384 79 FGRVDLLVYN 88 (259)
T ss_pred cCCCCEEEEC
Confidence 4567765544
No 481
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=55.67 E-value=1.8e+02 Score=27.12 Aligned_cols=85 Identities=24% Similarity=0.257 Sum_probs=49.5
Q ss_pred ccCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchH---HHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHH
Q 011801 108 TFDPDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFD---RDLSWRTGVQIVPVHCDISNNFKITREALEAAYER 184 (477)
Q Consensus 108 ~~~~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~---~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~ 184 (477)
.++...+++|+|+...=..+...|++.|-.|++....=.... ..++.. |.++..+.+|-. +.+.+.+++++
T Consensus 8 ~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~-----~~~~~~~~~~~ 81 (256)
T PRK06124 8 SLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAA-GGAAEALAFDIA-----DEEAVAAAFAR 81 (256)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhc-CCceEEEEccCC-----CHHHHHHHHHH
Confidence 345566777777665555666777788888877654322111 122223 555666666532 46777777776
Q ss_pred HHHhCCCeeEEEEe
Q 011801 185 AQEASINIKGLIIT 198 (477)
Q Consensus 185 ~~~~~~~~k~vii~ 198 (477)
..+.-.++.+++.+
T Consensus 82 ~~~~~~~id~vi~~ 95 (256)
T PRK06124 82 IDAEHGRLDILVNN 95 (256)
T ss_pred HHHhcCCCCEEEEC
Confidence 65544466665543
No 482
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=55.54 E-value=1.3e+02 Score=27.67 Aligned_cols=84 Identities=19% Similarity=0.184 Sum_probs=45.3
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhh-CCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCC
Q 011801 112 DRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWR-TGVQIVPVHCDISNNFKITREALEAAYERAQEASI 190 (477)
Q Consensus 112 ~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~-~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~ 190 (477)
..|++|.|+...=..+.+.|.+.|..|++....-.......... ...++..+++|-. +.+.+++++++......
T Consensus 6 ~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~~~~~ 80 (238)
T PRK05786 6 KKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVS-----STESARNVIEKAAKVLN 80 (238)
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCC-----CHHHHHHHHHHHHHHhC
Confidence 46777776554445556677788988887765432222221211 0123455555432 46777777765543323
Q ss_pred CeeEEEEeCC
Q 011801 191 NIKGLIITNP 200 (477)
Q Consensus 191 ~~k~vii~nP 200 (477)
++..++.+..
T Consensus 81 ~id~ii~~ag 90 (238)
T PRK05786 81 AIDGLVVTVG 90 (238)
T ss_pred CCCEEEEcCC
Confidence 5666665543
No 483
>PRK07074 short chain dehydrogenase; Provisional
Probab=55.47 E-value=1.7e+02 Score=27.27 Aligned_cols=82 Identities=22% Similarity=0.258 Sum_probs=42.9
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCe
Q 011801 113 RIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINI 192 (477)
Q Consensus 113 ~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~ 192 (477)
.+++|+|+...=..+...|.+.|..|++..-.-...........+.++..+++|-. +.+.+..++++..+...++
T Consensus 4 ~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~~~~ 78 (257)
T PRK07074 4 TALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLT-----DAASLAAALANAAAERGPV 78 (257)
T ss_pred EEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCC-----CHHHHHHHHHHHHHHcCCC
Confidence 36666655444444555667788777766533222222222211344555565532 4677777776554443456
Q ss_pred eEEEEeC
Q 011801 193 KGLIITN 199 (477)
Q Consensus 193 k~vii~n 199 (477)
.+|+.+.
T Consensus 79 d~vi~~a 85 (257)
T PRK07074 79 DVLVANA 85 (257)
T ss_pred CEEEECC
Confidence 7655543
No 484
>PRK08303 short chain dehydrogenase; Provisional
Probab=55.08 E-value=1.7e+02 Score=28.63 Aligned_cols=82 Identities=17% Similarity=0.175 Sum_probs=48.1
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCc---------c-c---hHHHHhhhCCcEEEEEeccCCCCcccCHHHH
Q 011801 112 DRIVMGGGATGANELIMFCLANPGDAFLVPSPYY---------A-A---FDRDLSWRTGVQIVPVHCDISNNFKITREAL 178 (477)
Q Consensus 112 ~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y---------~-~---~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l 178 (477)
..+++|+|+.+.=..+...|+..|-.|++..-.- . . ....+... |.++..+.+|-. +.+.+
T Consensus 9 k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~Dv~-----~~~~v 82 (305)
T PRK08303 9 KVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAA-GGRGIAVQVDHL-----VPEQV 82 (305)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhc-CCceEEEEcCCC-----CHHHH
Confidence 4566777666555566677888898877653221 0 1 11222223 556666777642 57888
Q ss_pred HHHHHHHHHhCCCeeEEEEeCC
Q 011801 179 EAAYERAQEASINIKGLIITNP 200 (477)
Q Consensus 179 ~~~~~~~~~~~~~~k~vii~nP 200 (477)
++++++..+.-.++.. +++|.
T Consensus 83 ~~~~~~~~~~~g~iDi-lVnnA 103 (305)
T PRK08303 83 RALVERIDREQGRLDI-LVNDI 103 (305)
T ss_pred HHHHHHHHHHcCCccE-EEECC
Confidence 8888776555456775 44444
No 485
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=54.86 E-value=1.8e+02 Score=27.03 Aligned_cols=81 Identities=20% Similarity=0.268 Sum_probs=46.5
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHH---HhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHh
Q 011801 112 DRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRD---LSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEA 188 (477)
Q Consensus 112 ~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~---~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~ 188 (477)
..+++|+|+...=..++..|.+.|..|++....-...... +... |.++..+.+|-. +.+.++++++...+.
T Consensus 8 ~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~-----~~~~~~~~~~~~~~~ 81 (262)
T PRK13394 8 KTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKA-GGKAIGVAMDVT-----NEDAVNAGIDKVAER 81 (262)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhc-CceEEEEECCCC-----CHHHHHHHHHHHHHH
Confidence 3466666655444456667778888887665543333322 2223 556666666532 567777777665444
Q ss_pred CCCeeEEEEe
Q 011801 189 SINIKGLIIT 198 (477)
Q Consensus 189 ~~~~k~vii~ 198 (477)
..++.+|+.+
T Consensus 82 ~~~~d~vi~~ 91 (262)
T PRK13394 82 FGSVDILVSN 91 (262)
T ss_pred cCCCCEEEEC
Confidence 4456765544
No 486
>PRK06398 aldose dehydrogenase; Validated
Probab=54.84 E-value=1.6e+02 Score=27.62 Aligned_cols=93 Identities=14% Similarity=0.185 Sum_probs=50.8
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCC
Q 011801 112 DRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASIN 191 (477)
Q Consensus 112 ~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~ 191 (477)
..+++|+|+.+.=..+...|.+.|-.|++..-.-. . ..++..+.+|-. +.+.+++++++..++..+
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~------~---~~~~~~~~~D~~-----~~~~i~~~~~~~~~~~~~ 72 (258)
T PRK06398 7 KVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEP------S---YNDVDYFKVDVS-----NKEQVIKGIDYVISKYGR 72 (258)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcc------c---cCceEEEEccCC-----CHHHHHHHHHHHHHHcCC
Confidence 45777777665555666777788888876542211 0 113444555532 467777777766555556
Q ss_pred eeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 011801 192 IKGLIITNPSNPLGT--TLDRDTLKSLVS 218 (477)
Q Consensus 192 ~k~vii~nP~NPtG~--~~~~~~l~~l~~ 218 (477)
+++|+.+....+.+. ..+.++++++.+
T Consensus 73 id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 101 (258)
T PRK06398 73 IDILVNNAGIESYGAIHAVEEDEWDRIIN 101 (258)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 776554322222222 234555555544
No 487
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=54.84 E-value=30 Score=34.42 Aligned_cols=56 Identities=29% Similarity=0.452 Sum_probs=38.1
Q ss_pred CCCCeEEEcCCCcc-chHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeC-CCCCc
Q 011801 133 NPGDAFLVPSPYYA-AFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITN-PSNPL 204 (477)
Q Consensus 133 ~~Gd~vlv~~P~y~-~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~n-P~NPt 204 (477)
+++..|++-+-..- ...+.+..+ |+++.-||.+. +.+++.+. ++++|+++| |.+|.
T Consensus 177 ~~~~~Vv~iD~GvK~nIlr~L~~r-g~~vtVVP~~t------~~eeIl~~---------~pDGiflSNGPGDP~ 234 (368)
T COG0505 177 EPGKHVVVIDFGVKRNILRELVKR-GCRVTVVPADT------SAEEILAL---------NPDGIFLSNGPGDPA 234 (368)
T ss_pred CCCcEEEEEEcCccHHHHHHHHHC-CCeEEEEcCCC------CHHHHHhh---------CCCEEEEeCCCCChh
Confidence 34567777775543 455666667 99999998753 45555443 788999987 67883
No 488
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=54.70 E-value=1.5e+02 Score=27.39 Aligned_cols=86 Identities=21% Similarity=0.241 Sum_probs=48.2
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchH---HHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCC
Q 011801 114 IVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFD---RDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASI 190 (477)
Q Consensus 114 i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~---~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~ 190 (477)
+++|+|+...=..+...|...|-.|++..-.-.... ..+... +.++..+.+|-. |.+.+.+++++..+...
T Consensus 3 ~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~-----~~~~i~~~~~~~~~~~~ 76 (254)
T TIGR02415 3 ALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQA-GGKAVAYKLDVS-----DKDQVFSAIDQAAEKFG 76 (254)
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEEcCCC-----CHHHHHHHHHHHHHHcC
Confidence 566665544444555667778877765543211111 122222 556666666532 57778887776655555
Q ss_pred CeeEEEEeCCCCCcc
Q 011801 191 NIKGLIITNPSNPLG 205 (477)
Q Consensus 191 ~~k~vii~nP~NPtG 205 (477)
++.+|+.+....+.+
T Consensus 77 ~id~vi~~ag~~~~~ 91 (254)
T TIGR02415 77 GFDVMVNNAGVAPIT 91 (254)
T ss_pred CCCEEEECCCcCCCC
Confidence 677777655444444
No 489
>PRK05693 short chain dehydrogenase; Provisional
Probab=54.39 E-value=1.7e+02 Score=27.62 Aligned_cols=97 Identities=13% Similarity=0.173 Sum_probs=50.2
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCe
Q 011801 113 RIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINI 192 (477)
Q Consensus 113 ~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~ 192 (477)
.+++|+|+...=..+...|.+.|-.|++....-..... +... +...+ .+|-. +.+.++++++...+...++
T Consensus 3 ~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~-~~~~~--~~Dl~-----~~~~~~~~~~~~~~~~~~i 73 (274)
T PRK05693 3 VVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEA-LAAA-GFTAV--QLDVN-----DGAALARLAEELEAEHGGL 73 (274)
T ss_pred EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHC-CCeEE--EeeCC-----CHHHHHHHHHHHHHhcCCC
Confidence 36666665544445556677788888776543322221 2222 44444 33322 4677777777665555567
Q ss_pred eEEEEeCCCCCcccC--CCHHHHHHHHH
Q 011801 193 KGLIITNPSNPLGTT--LDRDTLKSLVS 218 (477)
Q Consensus 193 k~vii~nP~NPtG~~--~~~~~l~~l~~ 218 (477)
..|+.+.-..+.|.. .+.+++++..+
T Consensus 74 d~vi~~ag~~~~~~~~~~~~~~~~~~~~ 101 (274)
T PRK05693 74 DVLINNAGYGAMGPLLDGGVEAMRRQFE 101 (274)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 765544333333332 24444444333
No 490
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=53.95 E-value=50 Score=32.27 Aligned_cols=42 Identities=12% Similarity=0.205 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEE
Q 011801 175 REALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLV 228 (477)
Q Consensus 175 ~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI 228 (477)
++.++++.++ .+|.+++..-.- +.++-++|.+.|+++|+.++
T Consensus 79 ~~~l~e~~~~------gvk~avI~s~Gf------~~~~~~~l~~~a~~~girvl 120 (291)
T PRK05678 79 ADAILEAIDA------GIDLIVCITEGI------PVLDMLEVKAYLERKKTRLI 120 (291)
T ss_pred HHHHHHHHHC------CCCEEEEECCCC------CHHHHHHHHHHHHHcCCEEE
Confidence 4555555543 677765554322 24444689999999999888
No 491
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=53.69 E-value=1.9e+02 Score=26.94 Aligned_cols=80 Identities=23% Similarity=0.214 Sum_probs=46.1
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHH---HHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHH
Q 011801 111 PDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDR---DLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQE 187 (477)
Q Consensus 111 ~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~---~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~ 187 (477)
...+++|.|+...=..+...|.+.|..|++....- .... .+... +.++..+.+|-. +.+.+++++++..+
T Consensus 8 ~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~-~~~~~~~~~~~~-~~~~~~~~~D~~-----~~~~~~~~~~~~~~ 80 (260)
T PRK12823 8 GKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE-LVHEVAAELRAA-GGEALALTADLE-----TYAGAQAAMAAAVE 80 (260)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch-HHHHHHHHHHhc-CCeEEEEEEeCC-----CHHHHHHHHHHHHH
Confidence 34566766655544556667888898887765431 1111 12222 556666666532 46777777776655
Q ss_pred hCCCeeEEEE
Q 011801 188 ASINIKGLII 197 (477)
Q Consensus 188 ~~~~~k~vii 197 (477)
...++..++.
T Consensus 81 ~~~~id~lv~ 90 (260)
T PRK12823 81 AFGRIDVLIN 90 (260)
T ss_pred HcCCCeEEEE
Confidence 5456776553
No 492
>PRK07985 oxidoreductase; Provisional
Probab=53.57 E-value=1.6e+02 Score=28.43 Aligned_cols=80 Identities=14% Similarity=0.165 Sum_probs=46.0
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCc--cc---hHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHH
Q 011801 112 DRIVMGGGATGANELIMFCLANPGDAFLVPSPYY--AA---FDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQ 186 (477)
Q Consensus 112 ~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y--~~---~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~ 186 (477)
..+++|+|+...=..+...|++.|-.|++....- .. ....+... |.++..+.+|-. +.+++++++++..
T Consensus 50 k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~-----~~~~~~~~~~~~~ 123 (294)
T PRK07985 50 RKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEEC-GRKAVLLPGDLS-----DEKFARSLVHEAH 123 (294)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHc-CCeEEEEEccCC-----CHHHHHHHHHHHH
Confidence 4577777665555566677888898887743211 11 11112222 556666666542 4677877777665
Q ss_pred HhCCCeeEEEE
Q 011801 187 EASINIKGLII 197 (477)
Q Consensus 187 ~~~~~~k~vii 197 (477)
+...++..++.
T Consensus 124 ~~~g~id~lv~ 134 (294)
T PRK07985 124 KALGGLDIMAL 134 (294)
T ss_pred HHhCCCCEEEE
Confidence 54456665544
No 493
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=53.37 E-value=1.9e+02 Score=27.26 Aligned_cols=84 Identities=19% Similarity=0.173 Sum_probs=46.4
Q ss_pred CCcEEEeCCh--HHHHHHHHHHhcCCCCeEEEcCCCc---cchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHH
Q 011801 111 PDRIVMGGGA--TGANELIMFCLANPGDAFLVPSPYY---AAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERA 185 (477)
Q Consensus 111 ~~~i~~t~G~--t~al~~i~~~l~~~Gd~vlv~~P~y---~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~ 185 (477)
...+++|.|+ .+.=..+...|++.|..|++..-.- ...........+.++..+++|-. |.+.+++++++.
T Consensus 7 ~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~ 81 (257)
T PRK08594 7 GKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVT-----SDEEITACFETI 81 (257)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCC-----CHHHHHHHHHHH
Confidence 3457777765 3344455567788898887753211 11122222111445666676643 567788877766
Q ss_pred HHhCCCeeEEEEeCC
Q 011801 186 QEASINIKGLIITNP 200 (477)
Q Consensus 186 ~~~~~~~k~vii~nP 200 (477)
.+.-.++.+++ .|.
T Consensus 82 ~~~~g~ld~lv-~na 95 (257)
T PRK08594 82 KEEVGVIHGVA-HCI 95 (257)
T ss_pred HHhCCCccEEE-ECc
Confidence 55445677544 444
No 494
>PRK08267 short chain dehydrogenase; Provisional
Probab=53.30 E-value=1.9e+02 Score=27.06 Aligned_cols=81 Identities=17% Similarity=0.063 Sum_probs=43.4
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHh-CCC
Q 011801 113 RIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEA-SIN 191 (477)
Q Consensus 113 ~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~-~~~ 191 (477)
.+++|+|+...=..+...|++.|..|++.+..=...........+.++..+.+|-. +.++++++++...+. ..+
T Consensus 3 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~~~~~~~ 77 (260)
T PRK08267 3 SIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVT-----DRAAWDAALADFAAATGGR 77 (260)
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCC-----CHHHHHHHHHHHHHHcCCC
Confidence 36666665544444556677888887776543222222222221344555555532 467777777665443 346
Q ss_pred eeEEEEe
Q 011801 192 IKGLIIT 198 (477)
Q Consensus 192 ~k~vii~ 198 (477)
+.+|+.+
T Consensus 78 id~vi~~ 84 (260)
T PRK08267 78 LDVLFNN 84 (260)
T ss_pred CCEEEEC
Confidence 7765544
No 495
>PRK07890 short chain dehydrogenase; Provisional
Probab=53.24 E-value=1.2e+02 Score=28.34 Aligned_cols=81 Identities=16% Similarity=0.187 Sum_probs=46.1
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHH---HhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHh
Q 011801 112 DRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRD---LSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEA 188 (477)
Q Consensus 112 ~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~---~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~ 188 (477)
..+++|+|+...=..+...|+..|..|++..-.-...... +... +.++..+.+|-. +.+.++.++++..+.
T Consensus 6 k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~-----~~~~~~~~~~~~~~~ 79 (258)
T PRK07890 6 KVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDL-GRRALAVPTDIT-----DEDQCANLVALALER 79 (258)
T ss_pred CEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHh-CCceEEEecCCC-----CHHHHHHHHHHHHHH
Confidence 4567776655555556666778898888765432222221 1222 445566666532 567777777765444
Q ss_pred CCCeeEEEEe
Q 011801 189 SINIKGLIIT 198 (477)
Q Consensus 189 ~~~~k~vii~ 198 (477)
-.++.+|+.+
T Consensus 80 ~g~~d~vi~~ 89 (258)
T PRK07890 80 FGRVDALVNN 89 (258)
T ss_pred cCCccEEEEC
Confidence 4467765544
No 496
>PRK07062 short chain dehydrogenase; Provisional
Probab=53.02 E-value=2e+02 Score=26.95 Aligned_cols=82 Identities=15% Similarity=0.177 Sum_probs=46.9
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHH---Hhh-hCCcEEEEEeccCCCCcccCHHHHHHHHHHHH
Q 011801 111 PDRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRD---LSW-RTGVQIVPVHCDISNNFKITREALEAAYERAQ 186 (477)
Q Consensus 111 ~~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~---~~~-~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~ 186 (477)
...+++|.|+...=..+...|...|..|++....-...... +.. ..+.++..+++|-. |.+++++++++..
T Consensus 8 ~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~ 82 (265)
T PRK07062 8 GRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVL-----DEADVAAFAAAVE 82 (265)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCC-----CHHHHHHHHHHHH
Confidence 34566666665555556667778888887765433222221 111 11346666776642 5677888777665
Q ss_pred HhCCCeeEEEE
Q 011801 187 EASINIKGLII 197 (477)
Q Consensus 187 ~~~~~~k~vii 197 (477)
+.-.++..++.
T Consensus 83 ~~~g~id~li~ 93 (265)
T PRK07062 83 ARFGGVDMLVN 93 (265)
T ss_pred HhcCCCCEEEE
Confidence 54456776543
No 497
>PRK08339 short chain dehydrogenase; Provisional
Probab=52.91 E-value=1.9e+02 Score=27.28 Aligned_cols=100 Identities=14% Similarity=0.160 Sum_probs=52.3
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHHH---hhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHh
Q 011801 112 DRIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRDL---SWRTGVQIVPVHCDISNNFKITREALEAAYERAQEA 188 (477)
Q Consensus 112 ~~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~~---~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~ 188 (477)
..+++|.|+.+.=..+...|.+.|..|++..-.-....... ....+.++..+.+|-. |.+++++++++..+
T Consensus 9 k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~i~~~~~~~~~- 82 (263)
T PRK08339 9 KLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLT-----KREDLERTVKELKN- 82 (263)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCC-----CHHHHHHHHHHHHh-
Confidence 34666666655555666778888988877654332222211 1111445555666532 46677777765532
Q ss_pred CCCeeEEEEeCCCCC-ccc--CCCHHHHHHHHH
Q 011801 189 SINIKGLIITNPSNP-LGT--TLDRDTLKSLVS 218 (477)
Q Consensus 189 ~~~~k~vii~nP~NP-tG~--~~~~~~l~~l~~ 218 (477)
-.++.. +++|..-+ .+. -.+.+++++..+
T Consensus 83 ~g~iD~-lv~nag~~~~~~~~~~~~~~~~~~~~ 114 (263)
T PRK08339 83 IGEPDI-FFFSTGGPKPGYFMEMSMEDWEGAVK 114 (263)
T ss_pred hCCCcE-EEECCCCCCCCCcccCCHHHHHHHHH
Confidence 235665 44444221 121 245566666544
No 498
>TIGR00289 conserved hypothetical protein TIGR00289. Homologous proteins related to MJ0570 of Methanococcus jannaschii include both the apparent orthologs found by this model above the trusted cutoff, the much longer protein YLR143W from Saccharomyces cerevisiae, and second homologous proteins from Archaeoglobus fulgidus and Pyrococcus horikoshii that appear to represent a second orthologous group.
Probab=52.86 E-value=1.7e+02 Score=27.37 Aligned_cols=62 Identities=8% Similarity=0.118 Sum_probs=40.1
Q ss_pred HhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEE
Q 011801 152 LSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLV 228 (477)
Q Consensus 152 ~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI 228 (477)
++.. |+.++.+.+.. .+ -+.+++.++...+. ++.+|+ +|.+.+..+...+-++|++.|+..+
T Consensus 54 A~al-giPl~~~~~~~--~~---e~~~~~l~~~l~~~--gv~~vv-------~GdI~s~~qr~~~e~vc~~~gl~~~ 115 (222)
T TIGR00289 54 AEAV-GIPLIKLYTSG--EE---EKEVEDLAGQLGEL--DVEALC-------IGAIESNYQKSRIDKVCRELGLKSI 115 (222)
T ss_pred HHHc-CCCeEEEEcCC--ch---hHHHHHHHHHHHHc--CCCEEE-------ECccccHHHHHHHHHHHHHcCCEEe
Confidence 3434 88887776542 11 23334433333222 466665 6999999999999999999998655
No 499
>PRK07677 short chain dehydrogenase; Provisional
Probab=52.59 E-value=1.8e+02 Score=27.11 Aligned_cols=100 Identities=17% Similarity=0.267 Sum_probs=52.5
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCccchHHH---HhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhC
Q 011801 113 RIVMGGGATGANELIMFCLANPGDAFLVPSPYYAAFDRD---LSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEAS 189 (477)
Q Consensus 113 ~i~~t~G~t~al~~i~~~l~~~Gd~vlv~~P~y~~~~~~---~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~ 189 (477)
.+++|+|+...=..+...|.+.|..|++..-.-...... +... +.++..+.+|-. +.+.+++++++..+..
T Consensus 3 ~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~ 76 (252)
T PRK07677 3 VVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQF-PGQVLTVQMDVR-----NPEDVQKMVEQIDEKF 76 (252)
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEecCC-----CHHHHHHHHHHHHHHh
Confidence 366666665555556667778888887764332212221 2222 345556666532 5677777777655444
Q ss_pred CCeeEEEEeCCCCCcc--cCCCHHHHHHHHH
Q 011801 190 INIKGLIITNPSNPLG--TTLDRDTLKSLVS 218 (477)
Q Consensus 190 ~~~k~vii~nP~NPtG--~~~~~~~l~~l~~ 218 (477)
.++.+|+.+-.....+ .-.+.+++++..+
T Consensus 77 ~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~ 107 (252)
T PRK07677 77 GRIDALINNAAGNFICPAEDLSVNGWNSVID 107 (252)
T ss_pred CCccEEEECCCCCCCCCcccCCHHHHHHHHh
Confidence 4667655432211111 1345555555554
No 500
>PF00728 Glyco_hydro_20: Glycosyl hydrolase family 20, catalytic domain; InterPro: IPR015883 Glycoside hydrolase family 20 GH20 from CAZY comprises enzymes with several known activities; beta-hexosaminidase (3.2.1.52 from EC); lacto-N-biosidase (3.2.1.140 from EC). Carbonyl oxygen of the C-2 acetamido group of the substrate acts as the catalytic nucleophile/base in this family of enzymes. In the brain and other tissues, beta-hexosaminidase A degrades GM2 gangliosides; specifically, the enzyme hydrolyses terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides. There are 3 forms of beta-hexosaminidase: hexosaminidase A is a trimer, with one alpha, one beta-A and one beta-B chain; hexosaminidase B is a tetramer of two beta-A and two beta-B chains; and hexosaminidase S is a homodimer of alpha chains. The two beta chains are derived from the cleavage of a precursor. Mutations in the beta-chain lead to Sandhoff disease, a lysosomal storage disorder characterised by accumulation of GM2 ganglioside [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 3RPM_A 1C7T_A 1QBA_A 1QBB_A 1C7S_A 3RCN_A 2YL8_A 2YL6_A 2YLL_A 2YL5_C ....
Probab=52.58 E-value=9.3 Score=38.20 Aligned_cols=65 Identities=14% Similarity=0.455 Sum_probs=41.3
Q ss_pred HHhhhCCcEEEEEeccCCCCcccCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCeEEE
Q 011801 151 DLSWRTGVQIVPVHCDISNNFKITREALEAAYERAQEASINIKGLIITNPSNPLGTTLDRDTLKSLVSFINDKNIHLV 228 (477)
Q Consensus 151 ~~~~~~g~~~~~v~~~~~~~f~i~~~~l~~~~~~~~~~~~~~k~vii~nP~NPtG~~~~~~~l~~l~~~~~~~~~~lI 228 (477)
.+... +.+.+.+.+..+.+|.+....+.+.-.... ..++.+ |..++++++++|++.|+++||-||
T Consensus 26 ~ma~~-k~N~lhlhl~D~~~~~~~~~~~p~l~~~ga-----------~~~~~~-~~~yT~~di~~lv~yA~~~gI~VI 90 (351)
T PF00728_consen 26 QMAYY-KLNVLHLHLSDDQGFRLESKSYPELTEKGA-----------YRPSDA-GGYYTKEDIRELVAYAKERGIEVI 90 (351)
T ss_dssp HHHHT-T-SEEEEEEESSTCB-BEBSTSTHHHHTTT-----------ESTTCT-ESEBEHHHHHHHHHHHHHTT-EEE
T ss_pred HHHHc-CCcEEEEEEecCCCCccccCCCccccccCc-----------cccccc-cccCCHHHHHHHHHHHHHcCCcee
Confidence 34444 888888888766778876655544332110 001113 449999999999999999999888
Done!