Query 011813
Match_columns 477
No_of_seqs 398 out of 2467
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 15:50:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011813.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011813hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r83_A Synaptotagmin-1; C2A-C2 100.0 6.2E-29 2.1E-33 242.4 21.8 182 259-476 14-205 (284)
2 1dqv_A Synaptotagmin III; beta 100.0 7.3E-28 2.5E-32 236.2 18.1 181 259-476 15-207 (296)
3 2dmh_A Myoferlin; beta-sandwic 99.9 1.9E-21 6.5E-26 168.9 16.5 128 261-395 4-134 (140)
4 1wfj_A Putative elicitor-respo 99.9 1.2E-21 4E-26 169.3 13.5 126 259-396 5-132 (136)
5 3b7y_A E3 ubiquitin-protein li 99.9 7.5E-21 2.6E-25 167.7 14.8 129 260-394 16-153 (153)
6 1rlw_A Phospholipase A2, CALB 99.9 8.7E-21 3E-25 161.5 14.5 121 263-394 2-125 (126)
7 2fk9_A Protein kinase C, ETA t 99.8 4.8E-21 1.6E-25 168.8 11.8 119 259-393 24-156 (157)
8 2ep6_A MCTP2 protein; beta san 99.8 8.3E-21 2.9E-25 163.4 11.9 126 258-394 7-132 (133)
9 1gmi_A Protein kinase C, epsil 99.8 1.5E-20 5.1E-25 162.5 13.4 117 262-394 4-133 (136)
10 3kwu_A MUNC13-1; calcium bindi 99.8 6.6E-20 2.3E-24 160.7 17.0 123 260-393 13-146 (148)
11 3m7f_B E3 ubiquitin-protein li 99.8 4.2E-20 1.4E-24 166.9 15.8 130 260-395 4-142 (176)
12 3pyc_A E3 ubiquitin-protein li 99.8 2.1E-19 7.3E-24 154.3 15.1 125 262-392 3-131 (132)
13 2z0u_A WW domain-containing pr 99.8 8.3E-20 2.8E-24 161.2 9.0 111 259-369 38-154 (155)
14 3f04_A Synaptotagmin-1; C2A, c 99.8 3.7E-19 1.3E-23 154.9 12.5 112 259-370 29-142 (143)
15 2d8k_A Synaptotagmin VII; exoc 99.8 3.2E-19 1.1E-23 155.0 11.6 112 259-370 21-135 (141)
16 2nq3_A Itchy homolog E3 ubiqui 99.8 4.9E-19 1.7E-23 159.1 13.1 126 260-395 32-162 (173)
17 1rsy_A Synaptotagmin I; calciu 99.8 6.3E-19 2.2E-23 155.2 12.9 112 259-370 37-150 (152)
18 2b3r_A Phosphatidylinositol-4- 99.8 8.3E-19 2.8E-23 151.1 13.1 111 259-370 15-130 (134)
19 1ugk_A Synaptotagmin IV, KIAA1 99.8 3.1E-18 1E-22 148.2 13.7 112 259-370 17-133 (138)
20 3nsj_A Perforin-1; pore formin 99.8 1.2E-17 4.2E-22 174.6 20.2 177 195-393 304-503 (540)
21 1wfm_A Synaptotagmin XIII; C2 99.8 3.4E-18 1.2E-22 148.0 11.8 109 259-370 21-132 (138)
22 2enp_A B/K protein; C2 type 1, 99.8 1.8E-18 6E-23 151.4 9.5 112 259-370 21-141 (147)
23 2bwq_A Regulating synaptic mem 99.8 3.2E-18 1.1E-22 146.1 10.8 109 259-368 13-128 (129)
24 2chd_A Rabphilin-3A, exophilin 99.8 3.4E-18 1.2E-22 148.6 11.1 112 259-370 24-140 (142)
25 3fdw_A Synaptotagmin-like prot 99.8 1.7E-18 5.7E-23 151.7 9.1 113 259-371 18-135 (148)
26 2dmg_A KIAA1228 protein; beta- 99.7 2.7E-18 9.4E-23 149.2 9.6 111 259-370 19-135 (142)
27 1a25_A CALB, protein kinase C 99.7 7.8E-18 2.7E-22 147.6 12.4 107 263-370 30-139 (149)
28 3rdl_A Protein kinase C alpha 99.7 6E-18 2.1E-22 146.0 11.0 108 262-370 14-124 (137)
29 1rh8_A Piccolo protein; beta-s 99.7 1.9E-18 6.4E-23 150.2 7.1 108 263-370 17-138 (142)
30 2q3x_A Regulating synaptic mem 99.7 6.3E-18 2.1E-22 151.8 10.7 109 262-371 28-140 (171)
31 1v27_A Regulating synaptic mem 99.7 6.3E-18 2.2E-22 146.6 9.9 111 259-370 16-133 (141)
32 3fbk_A RGS3, RGP3, regulator o 99.7 1.7E-17 5.7E-22 146.2 11.5 111 259-370 22-137 (153)
33 1tjx_A Similar to synaptotagmi 99.7 4.7E-17 1.6E-21 144.3 12.7 112 259-370 20-147 (159)
34 3n5a_A Synaptotagmin-7; calciu 99.7 2.7E-17 9.3E-22 141.9 10.9 99 259-357 11-113 (138)
35 2cjt_A UNC-13 homolog A, MUNC1 99.7 9.2E-17 3.1E-21 137.6 13.4 119 261-392 2-130 (131)
36 2cm5_A Rabphilin-3A; protein t 99.7 1.1E-16 3.9E-21 142.8 13.7 99 259-357 32-134 (166)
37 3l9b_A Otoferlin; C2-domain, b 99.7 1.8E-16 6.2E-21 134.3 11.9 119 263-395 20-141 (144)
38 1w15_A Synaptotagmin IV; metal 99.7 7.8E-17 2.7E-21 141.9 10.1 97 259-355 25-125 (153)
39 3jzy_A Intersectin 2; C2 domai 99.7 2.4E-16 8.3E-21 165.8 12.5 121 260-393 383-507 (510)
40 2cjs_A UNC-13 homolog A, MUNC1 99.6 4.3E-15 1.5E-19 132.4 14.2 90 260-359 10-100 (167)
41 1cjy_A CPLA2, protein (cytosol 99.6 1.9E-15 6.5E-20 162.7 10.6 110 260-370 14-126 (749)
42 2r83_A Synaptotagmin-1; C2A-C2 99.6 2.4E-14 8.4E-19 138.9 13.4 110 261-370 147-272 (284)
43 1djx_A PLC-D1, phosphoinositid 99.5 8.2E-14 2.8E-18 148.8 14.9 123 262-393 495-623 (624)
44 1dqv_A Synaptotagmin III; beta 99.5 1.5E-14 5.1E-19 141.4 4.2 97 261-357 149-249 (296)
45 3bxj_A RAS GTPase-activating p 99.4 8.1E-15 2.8E-19 152.6 -0.0 127 261-395 8-158 (483)
46 3pfq_A PKC-B, PKC-beta, protei 99.3 4.2E-12 1.4E-16 137.8 9.8 108 262-370 170-280 (674)
47 3ohm_B 1-phosphatidylinositol- 99.2 9.4E-11 3.2E-15 128.3 13.1 120 263-398 724-849 (885)
48 2zkm_X 1-phosphatidylinositol- 99.2 1.5E-10 5.1E-15 126.6 13.0 116 262-393 676-798 (799)
49 3qr0_A Phospholipase C-beta (P 99.1 2.4E-10 8.1E-15 124.5 13.5 118 263-396 649-773 (816)
50 2enp_A B/K protein; C2 type 1, 99.1 2E-10 6.8E-15 99.8 8.4 67 379-477 8-87 (147)
51 2bwq_A Regulating synaptic mem 99.1 1.2E-10 4.2E-15 98.7 6.6 63 382-476 3-73 (129)
52 2chd_A Rabphilin-3A, exophilin 99.1 1.7E-10 6E-15 99.6 7.2 65 380-476 12-84 (142)
53 2z0u_A WW domain-containing pr 99.1 1.2E-10 4E-15 102.4 6.0 65 380-476 26-99 (155)
54 1tjx_A Similar to synaptotagmi 99.1 1.9E-10 6.5E-15 101.4 7.3 66 379-476 7-80 (159)
55 1v27_A Regulating synaptic mem 99.1 1.1E-10 3.7E-15 100.6 5.4 66 380-477 4-77 (141)
56 2cm5_A Rabphilin-3A; protein t 99.1 2.6E-10 8.9E-15 101.3 7.8 65 380-476 20-92 (166)
57 2dmg_A KIAA1228 protein; beta- 99.1 2.5E-10 8.5E-15 98.6 7.5 65 379-476 6-78 (142)
58 1ugk_A Synaptotagmin IV, KIAA1 99.1 2.3E-10 7.7E-15 98.4 7.2 66 379-476 4-76 (138)
59 1yrk_A NPKC-delta, protein kin 99.0 2.4E-09 8.1E-14 88.1 12.6 113 263-393 5-124 (126)
60 2d8k_A Synaptotagmin VII; exoc 99.0 2.6E-10 8.9E-15 98.4 7.2 65 380-476 9-79 (141)
61 3n5a_A Synaptotagmin-7; calciu 99.0 2.9E-10 1E-14 97.4 6.5 62 383-476 2-71 (138)
62 1wfm_A Synaptotagmin XIII; C2 99.0 4.9E-10 1.7E-14 96.3 7.7 65 380-476 9-77 (138)
63 3fdw_A Synaptotagmin-like prot 99.0 3.4E-10 1.2E-14 98.5 6.7 65 380-476 6-79 (148)
64 3fbk_A RGS3, RGP3, regulator o 99.0 2.6E-10 8.8E-15 99.9 5.9 66 379-476 9-81 (153)
65 1rsy_A Synaptotagmin I; calciu 99.0 3.8E-10 1.3E-14 98.7 6.7 65 380-476 25-95 (152)
66 1w15_A Synaptotagmin IV; metal 99.0 4.6E-10 1.6E-14 98.2 6.9 65 380-476 13-85 (153)
67 3f04_A Synaptotagmin-1; C2A, c 99.0 5.3E-10 1.8E-14 96.6 7.0 65 380-476 17-87 (143)
68 2enj_A NPKC-theta, protein kin 99.0 3E-09 1E-13 88.6 10.4 115 262-394 8-130 (138)
69 3rdl_A Protein kinase C alpha 98.9 2.2E-09 7.7E-14 91.8 7.5 61 382-476 3-71 (137)
70 1rh8_A Piccolo protein; beta-s 98.9 8.7E-10 3E-14 95.1 3.9 63 380-476 3-82 (142)
71 1a25_A CALB, protein kinase C 98.8 4E-09 1.4E-13 91.7 6.9 63 380-476 16-86 (149)
72 2q3x_A Regulating synaptic mem 98.8 6.4E-09 2.2E-13 92.8 6.3 63 380-476 15-86 (171)
73 2ep6_A MCTP2 protein; beta san 98.8 7E-09 2.4E-13 88.3 5.9 50 427-476 11-63 (133)
74 2fk9_A Protein kinase C, ETA t 98.8 9.4E-09 3.2E-13 90.1 6.6 52 426-477 26-91 (157)
75 2b3r_A Phosphatidylinositol-4- 98.7 1.1E-08 3.7E-13 87.4 6.1 50 427-476 18-74 (134)
76 3kwu_A MUNC13-1; calcium bindi 98.7 1.3E-08 4.4E-13 88.3 5.8 50 427-476 15-67 (148)
77 1rlw_A Phospholipase A2, CALB 98.7 8.2E-09 2.8E-13 86.9 4.4 50 427-476 1-59 (126)
78 2dmh_A Myoferlin; beta-sandwic 98.7 1.2E-08 4.2E-13 87.5 5.2 50 427-476 5-56 (140)
79 1wfj_A Putative elicitor-respo 98.6 2.4E-08 8E-13 85.3 4.7 50 427-476 8-61 (136)
80 3pyc_A E3 ubiquitin-protein li 98.6 4.7E-08 1.6E-12 83.0 5.8 50 427-476 3-57 (132)
81 1gmi_A Protein kinase C, epsil 98.6 3.8E-08 1.3E-12 84.1 4.5 50 427-476 4-68 (136)
82 2nq3_A Itchy homolog E3 ubiqui 98.6 5.2E-08 1.8E-12 87.0 5.6 50 427-476 34-86 (173)
83 3b7y_A E3 ubiquitin-protein li 98.5 6.7E-08 2.3E-12 84.2 5.1 51 426-476 17-76 (153)
84 2cjt_A UNC-13 homolog A, MUNC1 98.4 1.9E-07 6.4E-12 79.3 4.8 48 427-476 3-51 (131)
85 3nsj_A Perforin-1; pore formin 98.3 4.7E-07 1.6E-11 94.6 6.3 50 427-476 392-443 (540)
86 2cjs_A UNC-13 homolog A, MUNC1 98.3 3.6E-07 1.2E-11 80.9 3.5 48 427-476 12-60 (167)
87 3l9b_A Otoferlin; C2-domain, b 98.1 2.2E-06 7.5E-11 72.6 4.7 47 429-477 21-68 (144)
88 3jzy_A Intersectin 2; C2 domai 98.1 2.8E-06 9.7E-11 88.8 5.8 50 427-476 385-437 (510)
89 1cjy_A CPLA2, protein (cytosol 97.8 7.3E-06 2.5E-10 88.5 3.9 50 427-476 16-74 (749)
90 1djx_A PLC-D1, phosphoinositid 97.8 1.8E-05 6.1E-10 84.4 5.6 50 427-476 495-555 (624)
91 3pfq_A PKC-B, PKC-beta, protei 97.7 5.3E-05 1.8E-09 81.9 7.7 49 428-476 171-227 (674)
92 3qr0_A Phospholipase C-beta (P 97.4 0.00013 4.5E-09 79.6 5.4 49 427-476 648-704 (816)
93 2zkm_X 1-phosphatidylinositol- 97.2 0.00023 7.8E-09 77.9 5.1 48 427-475 676-731 (799)
94 3ohm_B 1-phosphatidylinositol- 97.1 0.00031 1.1E-08 77.1 4.9 48 427-475 723-777 (885)
95 3m7f_B E3 ubiquitin-protein li 96.9 0.0003 1E-08 62.4 2.3 32 445-476 27-64 (176)
96 3l4c_A Dedicator of cytokinesi 93.9 0.87 3E-05 41.2 12.7 57 299-355 77-139 (220)
97 2enj_A NPKC-theta, protein kin 93.1 0.16 5.4E-06 42.2 5.8 50 427-476 8-66 (138)
98 1yrk_A NPKC-delta, protein kin 93.0 0.15 5.3E-06 41.7 5.5 50 427-476 4-61 (126)
99 2yrb_A Protein fantom; beta sa 92.6 2 6.8E-05 36.6 12.1 128 259-394 13-150 (156)
100 2wxf_A Phosphatidylinositol-4, 89.2 1.7 5.8E-05 48.1 10.9 93 262-357 215-325 (940)
101 3hhm_A Phosphatidylinositol-4, 89.2 2.1 7.3E-05 47.8 11.6 93 263-357 354-456 (1091)
102 1e7u_A Phosphatidylinositol 3- 83.4 3.6 0.00012 45.6 9.5 93 264-357 218-331 (961)
103 2y3a_A Phosphatidylinositol-4, 74.2 4.2 0.00014 45.6 6.5 74 262-338 351-430 (1092)
104 1ewf_A BPI, bactericidal/perme 54.2 1.7E+02 0.0059 28.9 14.0 20 167-186 103-122 (456)
105 2l2t_A Receptor tyrosine-prote 47.6 4.2 0.00014 26.6 0.1 15 23-37 25-39 (44)
106 2ks1_B Epidermal growth factor 42.4 7.7 0.00026 25.4 0.8 14 23-36 26-39 (44)
107 2jwa_A Receptor tyrosine-prote 37.3 5.3 0.00018 26.1 -0.6 21 16-36 19-39 (44)
No 1
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.96 E-value=6.2e-29 Score=242.37 Aligned_cols=182 Identities=31% Similarity=0.429 Sum_probs=156.4
Q ss_pred ccCCceEEEEEEEEccccccccccCCCCcEEEEEEcCcccCceeeeeeCCCCCCeeeeEEEEEeecC--CCCeEEEEEEe
Q 011813 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEP--ESQILQLQVFD 336 (477)
Q Consensus 259 ~~~~~G~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~WnE~f~f~v~~~--~~~~L~v~V~d 336 (477)
.....|.|+|+|++|++|+.+|..|.+||||+++++++....++|+++++|+||.|||+|.|.+... ....|.|+|||
T Consensus 14 y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d 93 (284)
T 2r83_A 14 YDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYD 93 (284)
T ss_dssp EETTTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEE
T ss_pred EECCCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHhCcCEEEEEEEE
Confidence 4456799999999999999999889999999999987655567899999999999999999998642 35799999999
Q ss_pred cCCCCCCCeeEEEEEECcccCCCCceEEEEecccccCCCCCCCCccceEEEEEEEEEecccCcccccccccccccCCCCC
Q 011813 337 WDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGN 416 (477)
Q Consensus 337 ~d~~~~d~~lG~~~v~L~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~y~p~~~~~~~~~~~~~~~~~~~~~~ 416 (477)
+|.+++|++||++.++|.++..+.....|++|..... ......|+|+++++|.|
T Consensus 94 ~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~----~~~~~~G~i~l~l~~~p---------------------- 147 (284)
T 2r83_A 94 FDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEK----EEQEKLGDICFSLRYVP---------------------- 147 (284)
T ss_dssp CCSSSCCCEEEEEEEEGGGCCCSSCEEEEEECBCCSS----CCCCCCCEEEEEEEEET----------------------
T ss_pred CCCCCCCceeEEEEEcchhcccCCcceeEEEeecccc----ccccccccEEEEEEecC----------------------
Confidence 9999999999999999999998888889998865311 12346799999999987
Q ss_pred CCCCCccccCcceEEEEEEeeeecCCC---CCCCCcEEEEEEcC-----eEeeeeeeeeccCccceec
Q 011813 417 DQSSDEEALSGAGLLSVLVQGAEDVEG---ENHNNPYAIILYKG-----DKKRTKVSFLSLLYTYSLQ 476 (477)
Q Consensus 417 ~~~~~~~~~~~~g~L~V~V~~A~~L~~---~~~~DPyvkv~l~~-----~~~kTkv~~~t~~P~~~~~ 476 (477)
..+.|.|.|++|+||+. ++.+||||++++.+ .++||+++++|+||.||..
T Consensus 148 ----------~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~ 205 (284)
T 2r83_A 148 ----------TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNES 205 (284)
T ss_dssp ----------TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEE
T ss_pred ----------cCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEcee
Confidence 56899999999999986 46899999999852 3559999999999999953
No 2
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.95 E-value=7.3e-28 Score=236.23 Aligned_cols=181 Identities=29% Similarity=0.443 Sum_probs=149.0
Q ss_pred ccCCceEEEEEEEEccccccccccCCCCcEEEEEEcCcccCceeeeeeCCCCCCeeeeEEEEEeecC--CCCeEEEEEEe
Q 011813 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEP--ESQILQLQVFD 336 (477)
Q Consensus 259 ~~~~~G~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~WnE~f~f~v~~~--~~~~L~v~V~d 336 (477)
.....|.|.|+|++|++|+.+|..|.+||||++++.+.....++|+++++|+||+|||+|.|.+... ....|+|+|||
T Consensus 15 y~~~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d 94 (296)
T 1dqv_A 15 YLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYD 94 (296)
T ss_dssp CCSSSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEEE
T ss_pred EeCCCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEEEEE
Confidence 4556799999999999999999999999999999965444567999999999999999999998633 24589999999
Q ss_pred cCCCCCCCeeEEEEEE-CcccCC-CCceEEEEecccccCCCCCCCCccceEEEEEEEEEecccCcccccccccccccCCC
Q 011813 337 WDKVGGHDRLGMQLVP-LKLLTP-HETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGS 414 (477)
Q Consensus 337 ~d~~~~d~~lG~~~v~-L~~l~~-~~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~y~p~~~~~~~~~~~~~~~~~~~~ 414 (477)
+|.+++|++||++.++ +.++.. ......|+++.... ......|+|++.+.|.|
T Consensus 95 ~d~~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~-----~~~~~~G~i~vsl~y~~-------------------- 149 (296)
T 1dqv_A 95 FDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGG-----SEKADLGELNFSLCYLP-------------------- 149 (296)
T ss_dssp CCSSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCCS-----SCCSCCCEEEEEEEEET--------------------
T ss_pred cCCCCCCceEEEEEeccccccccCCccceeeecccccc-----ccccccceEEEEEEecc--------------------
Confidence 9999999999999996 444432 33445666664321 12456899999999987
Q ss_pred CCCCCCCccccCcceEEEEEEeeeecCCC---CCCCCcEEEEEEc--C---eEeeeeeeeeccCccceec
Q 011813 415 GNDQSSDEEALSGAGLLSVLVQGAEDVEG---ENHNNPYAIILYK--G---DKKRTKVSFLSLLYTYSLQ 476 (477)
Q Consensus 415 ~~~~~~~~~~~~~~g~L~V~V~~A~~L~~---~~~~DPyvkv~l~--~---~~~kTkv~~~t~~P~~~~~ 476 (477)
..|.|.|+|++|+||+. .+.+||||++++. + +++||+++++|+||.||..
T Consensus 150 ------------~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~ 207 (296)
T 1dqv_A 150 ------------TAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEA 207 (296)
T ss_dssp ------------TTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEEC
T ss_pred ------------ccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECce
Confidence 57899999999999986 4678999999996 2 4569999999999999964
No 3
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.87 E-value=1.9e-21 Score=168.86 Aligned_cols=128 Identities=31% Similarity=0.451 Sum_probs=109.2
Q ss_pred CCceEEEEEEEEccccccccccCCCCcEEEEEEcCcccCceeeeeeCCCCCCeeeeEEEEEeecC---CCCeEEEEEEec
Q 011813 261 KPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEP---ESQILQLQVFDW 337 (477)
Q Consensus 261 ~~~G~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~WnE~f~f~v~~~---~~~~L~v~V~d~ 337 (477)
...|.|+|+|++|++|+..+. |.+||||+++++++. ++|++++++.||+|||+|.|.+... ....|.|+|||+
T Consensus 4 ~~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~~~---~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~ 79 (140)
T 2dmh_A 4 GSSGMLRVIVESASNIPKTKF-GKPDPIVSVIFKDEK---KKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDF 79 (140)
T ss_dssp CBCCEEEEEEEEEESCCCCSS-SCCCEEEEEECSSCE---EECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEET
T ss_pred CCCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEECCEe---EEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEEC
Confidence 457999999999999999998 999999999998754 5999999999999999999999753 357899999999
Q ss_pred CCCCCCCeeEEEEEECcccCCCCceEEEEecccccCCCCCCCCccceEEEEEEEEEec
Q 011813 338 DKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYVPF 395 (477)
Q Consensus 338 d~~~~d~~lG~~~v~L~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~y~p~ 395 (477)
|.+++|++||++.++|.++..+.....|+++.+..+. .+....|+|+++++|.|.
T Consensus 80 d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~---~~~~~~G~l~l~~~~~p~ 134 (140)
T 2dmh_A 80 ETIGQNKLIGTATVALKDLTGDQSRSLPYKLISLLNE---KGQDTGATIDLVIGYDPP 134 (140)
T ss_dssp TCSSSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECT---TCCEEEEEEEEEEEECCC
T ss_pred CCCCCCceEEEEEEEHHHhccCCCceeEEeeeeccCC---CCCCCCCEEEEEEEEECC
Confidence 9999999999999999999888877788773322222 124567999999999984
No 4
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.87 E-value=1.2e-21 Score=169.33 Aligned_cols=126 Identities=32% Similarity=0.519 Sum_probs=110.1
Q ss_pred ccCCceEEEEEEEEccccccccccCCCCcEEEEEEcCcccCceeeeeeC-CCCCCeeeeEEEEEeecCCCCeEEEEEEec
Q 011813 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKK-KNLNPEWNENFKLVVKEPESQILQLQVFDW 337 (477)
Q Consensus 259 ~~~~~G~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~-~t~nP~WnE~f~f~v~~~~~~~L~v~V~d~ 337 (477)
...+.|.|+|+|++|++|+..+..|.+||||+++++++. ++|++++ ++.||+|||+|.|.+.+ ....|.|+|||+
T Consensus 5 ~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~---~kT~~~~~~~~nP~Wne~f~f~v~~-~~~~l~~~V~d~ 80 (136)
T 1wfj_A 5 SSGPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQD---QKSNVAEGMGTTPEWNETFIFTVSE-GTTELKAKIFDK 80 (136)
T ss_dssp CCCCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCE---EECCCCTTCCSSCEEEEEEEEEEES-SCCEEEEEECCS
T ss_pred CCCCcEEEEEEEEeccCCCCcccCCCcCceEEEEECCcc---ceeEeccCCCCCCccCcEEEEEECC-CCCEEEEEEEEC
Confidence 456889999999999999999988999999999998764 4899998 89999999999999987 567999999999
Q ss_pred CCCCCCCeeEEEEEECccc-CCCCceEEEEecccccCCCCCCCCccceEEEEEEEEEecc
Q 011813 338 DKVGGHDRLGMQLVPLKLL-TPHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYVPFK 396 (477)
Q Consensus 338 d~~~~d~~lG~~~v~L~~l-~~~~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~y~p~~ 396 (477)
|.+++|++||++.++|.++ ..+.....|++|.. +.+..|+|+++++|.|..
T Consensus 81 ~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~--------~~~~~G~i~l~l~~~p~~ 132 (136)
T 1wfj_A 81 DVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVVK--------DEEYKGEIWVALSFKPSG 132 (136)
T ss_dssp SSCTTTCCSEEEEEESHHHHHHSEEEEEEEEEEE--------TTEEEEEEEEEEEEEECC
T ss_pred CCCCCCceEEEEEEEHHHhccCCCCCcEEEEeec--------CCccCEEEEEEEEEEeCC
Confidence 9999999999999999999 44445567787752 357899999999999943
No 5
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.85 E-value=7.5e-21 Score=167.69 Aligned_cols=129 Identities=33% Similarity=0.514 Sum_probs=102.5
Q ss_pred cCCceEEEEEEEEccccccccccCCCCcEEEEEEcCcc---cCceeeeeeCCCCCCeeeeEEEEEeecCCCCeEEEEEEe
Q 011813 260 KKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEK---LPWKKTTVKKKNLNPEWNENFKLVVKEPESQILQLQVFD 336 (477)
Q Consensus 260 ~~~~G~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~---~~~~kT~v~~~t~nP~WnE~f~f~v~~~~~~~L~v~V~d 336 (477)
....|.|+|+|++|++|+.++..|.+||||++++.+.. ...++|+++++|+||+|||+|.|.+... ...|.|+|||
T Consensus 16 ~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~~~l~~~V~d 94 (153)
T 3b7y_A 16 EENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQ-QHRLLFEVFD 94 (153)
T ss_dssp CTTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTT-TCEEEEEEEE
T ss_pred CCCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCC-CCEEEEEEEE
Confidence 45679999999999999999988999999999998532 2457999999999999999999999764 5789999999
Q ss_pred cCCCCCCCeeEEEEEECcccCCCCce------EEEEecccccCCCCCCCCccceEEEEEEEEEe
Q 011813 337 WDKVGGHDRLGMQLVPLKLLTPHETK------EFTLDLLKHTNISDPKDMKQRGKIVVELTYVP 394 (477)
Q Consensus 337 ~d~~~~d~~lG~~~v~L~~l~~~~~~------~~~~~l~~~~~~~~~~~~~~~G~l~l~l~y~p 394 (477)
+|.+++|++||++.++|.++..+... ..|++|.... ......|+|+++++|.|
T Consensus 95 ~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~-----~~~~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 95 ENRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRS-----HKSRVKGYLRLKMTYLP 153 (153)
T ss_dssp CCSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSS-----TTCCCCSEEEEEEEECC
T ss_pred CCCCcCCCeeEEEEEEHHHcccCCCccccccccccccccccc-----CCCCcceEEEEEEEEeC
Confidence 99999999999999999999866532 4777775421 12467899999999986
No 6
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.85 E-value=8.7e-21 Score=161.54 Aligned_cols=121 Identities=26% Similarity=0.405 Sum_probs=104.9
Q ss_pred ceEEEEEEEEcccccc---ccccCCCCcEEEEEEcCcccCceeeeeeCCCCCCeeeeEEEEEeecCCCCeEEEEEEecCC
Q 011813 263 VGILHVKVVRASKLLK---KDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEPESQILQLQVFDWDK 339 (477)
Q Consensus 263 ~G~L~V~v~~A~~L~~---~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~WnE~f~f~v~~~~~~~L~v~V~d~d~ 339 (477)
.|.|+|+|++|++|+. .+..|.+||||++++++.....++|+++++|+||+|||+|.|.+.......|.|+|||+|.
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~ 81 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 81 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC
Confidence 5899999999999998 4667899999999998754456799999999999999999999976667899999999998
Q ss_pred CCCCCeeEEEEEECcccCCCCceEEEEecccccCCCCCCCCccceEEEEEEEEEe
Q 011813 340 VGGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYVP 394 (477)
Q Consensus 340 ~~~d~~lG~~~v~L~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~y~p 394 (477)
. +|++||++.++|.++..+.....|++|. ....|+|+++++-.|
T Consensus 82 ~-~~~~iG~~~i~l~~l~~~~~~~~~~~L~----------~~~~g~i~~~le~~~ 125 (126)
T 1rlw_A 82 V-MDETLGTATFTVSSMKVGEKKEVPFIFN----------QVTEMVLEMSLEVAS 125 (126)
T ss_dssp S-CCEEEEEEEEEGGGSCTTCEEEEEEEET----------TTEEEEEEEEEECCC
T ss_pred C-CCceeEEEEEEHHHccCCCcEEEEEEcC----------CCceEEEEEEEEeCC
Confidence 7 4899999999999999888888999884 245788888876544
No 7
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.85 E-value=4.8e-21 Score=168.83 Aligned_cols=119 Identities=27% Similarity=0.317 Sum_probs=102.7
Q ss_pred ccCCceEEEEEEEEcccccccccc----------CCCCcEEEEEEcCcccCceeeeeeCCCCCCeeeeEEEEEeecCCCC
Q 011813 259 IKKPVGILHVKVVRASKLLKKDFL----------GTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEPESQ 328 (477)
Q Consensus 259 ~~~~~G~L~V~v~~A~~L~~~d~~----------g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~WnE~f~f~v~~~~~~ 328 (477)
+....|.|+|+|++|++|+++|.. |.+||||++++++++ ..+|+++++|+||+|||+|.|.+.+ ..
T Consensus 24 ~~~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~--~~kT~v~~ktlnP~WNE~F~f~v~~--~~ 99 (157)
T 2fk9_A 24 TMKFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVR--VGQTSTKQKTNKPTYNEEFCANVTD--GG 99 (157)
T ss_dssp CCCEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEE--EEECCCCSSCSSCEEEEEEEEEEEE--EC
T ss_pred hccCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEe--eEEeeecCCCCCCccCcEEEEEcCC--CC
Confidence 446789999999999999988842 679999999998654 3589999999999999999999975 36
Q ss_pred eEEEEEEecCCCCCCCeeEEEEEECcccCCC----CceEEEEecccccCCCCCCCCccceEEEEEEEEE
Q 011813 329 ILQLQVFDWDKVGGHDRLGMQLVPLKLLTPH----ETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYV 393 (477)
Q Consensus 329 ~L~v~V~d~d~~~~d~~lG~~~v~L~~l~~~----~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~y~ 393 (477)
.|.|+|||+|.+++|++||++.++|.++..+ ...+.|++|. ..|+|+++++|.
T Consensus 100 ~L~~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~------------~~G~i~l~l~~~ 156 (157)
T 2fk9_A 100 HLELAVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLE------------PEGKVFVVITLT 156 (157)
T ss_dssp EEEEEEEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECB------------SSCEEEEEEEEC
T ss_pred EEEEEEEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECC------------CCcEEEEEEEEE
Confidence 8999999999999999999999999998754 5678999873 279999999873
No 8
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.84 E-value=8.3e-21 Score=163.35 Aligned_cols=126 Identities=35% Similarity=0.518 Sum_probs=107.8
Q ss_pred cccCCceEEEEEEEEccccccccccCCCCcEEEEEEcCcccCceeeeeeCCCCCCeeeeEEEEEeecCCCCeEEEEEEec
Q 011813 258 AIKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEPESQILQLQVFDW 337 (477)
Q Consensus 258 ~~~~~~G~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~WnE~f~f~v~~~~~~~L~v~V~d~ 337 (477)
....+.|.|+|+|++|++|+..+..|.+||||+++++++. ++|+++++|.||.|||+|.|.+.+. ...|.|+|||+
T Consensus 7 ~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~---~kT~~~~~t~nP~wne~f~f~~~~~-~~~l~i~V~d~ 82 (133)
T 2ep6_A 7 GDVKDVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDR---LQTHTVYKNLNPEWNKVFTFPIKDI-HDVLEVTVFDE 82 (133)
T ss_dssp CSCCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEE---EECCCCSSCSSCCCCEEEEEEESCT-TCEEEEEEEEE
T ss_pred cccCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEE---EEeeeecCCCCCccccEEEEEecCC-CCEEEEEEEEC
Confidence 4567889999999999999999988999999999998754 4899999999999999999999864 57899999999
Q ss_pred CCCCCCCeeEEEEEECcccCCCCceEEEEecccccCCCCCCCCccceEEEEEEEEEe
Q 011813 338 DKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYVP 394 (477)
Q Consensus 338 d~~~~d~~lG~~~v~L~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~y~p 394 (477)
|..++|++||++.++|.++..+.. .|++|.... .+....|+|+++++|..
T Consensus 83 d~~~~~~~lG~~~i~l~~l~~~~~--~w~~L~~~~-----~~~~~~G~i~l~i~~~~ 132 (133)
T 2ep6_A 83 DGDKPPDFLGKVAIPLLSIRDGQP--NCYVLKNKD-----LEQAFKGVIYLEMDLIY 132 (133)
T ss_dssp ETTEEEEECCBCEEEGGGCCSSCC--EECCCBCSC-----TTSCCSSEEEEEEEEEE
T ss_pred CCCCCCCeeEEEEEEHHHccCCCc--eEEEeecCC-----CCCccceEEEEEEEEEe
Confidence 998899999999999999976554 566664321 12467899999999874
No 9
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.84 E-value=1.5e-20 Score=162.48 Aligned_cols=117 Identities=24% Similarity=0.342 Sum_probs=101.1
Q ss_pred CceEEEEEEEEccccccccccCC-----------CCcEEEEEEcCcccCceeeeeeCCCCCCeeeeEEEEEeecCCCCeE
Q 011813 262 PVGILHVKVVRASKLLKKDFLGT-----------SDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEPESQIL 330 (477)
Q Consensus 262 ~~G~L~V~v~~A~~L~~~d~~g~-----------~dpyv~v~l~~~~~~~~kT~v~~~t~nP~WnE~f~f~v~~~~~~~L 330 (477)
..|.|+|+|++|++|++.|..++ +||||++++++.. ..+|+++++|+||+|||+|.|.+.+. ..|
T Consensus 4 ~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~--~~~T~~~~~t~nP~WnE~f~f~v~~~--~~L 79 (136)
T 1gmi_A 4 FNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSR--IGQTATKQKTNSPAWHDEFVTDVCNG--RKI 79 (136)
T ss_dssp EEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEE--EEECCCCSSCSSCEEEEEEEEEEEEE--CEE
T ss_pred cceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeE--eeeeeEECCCcCCccCCEEEEEecCC--CEE
Confidence 46999999999999998886554 9999999997653 35899999999999999999999764 789
Q ss_pred EEEEEecCCCCCCCeeEEEEEECcccCCCC--ceEEEEecccccCCCCCCCCccceEEEEEEEEEe
Q 011813 331 QLQVFDWDKVGGHDRLGMQLVPLKLLTPHE--TKEFTLDLLKHTNISDPKDMKQRGKIVVELTYVP 394 (477)
Q Consensus 331 ~v~V~d~d~~~~d~~lG~~~v~L~~l~~~~--~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~y~p 394 (477)
.|+|||+|.+++|++||++.++|.++..+. ....|+++. +.|+|+++++|.+
T Consensus 80 ~~~V~d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~------------~~G~i~l~l~~~~ 133 (136)
T 1gmi_A 80 ELAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLE------------PEGKVYVIIDLSG 133 (136)
T ss_dssp EEEEEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEECB------------SSCEEEEEEEEEE
T ss_pred EEEEEeCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEcC------------CCeEEEEEEEEEe
Confidence 999999999999999999999999998653 347788752 3799999999986
No 10
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.84 E-value=6.6e-20 Score=160.67 Aligned_cols=123 Identities=30% Similarity=0.436 Sum_probs=103.8
Q ss_pred cCCceEEEEEEEEccccccccccCCCCcEEEEEEcCcccCceeeeeeCCCCCCeeeeEEEEEeecCCCCeEEEEEEecCC
Q 011813 260 KKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEPESQILQLQVFDWDK 339 (477)
Q Consensus 260 ~~~~G~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~WnE~f~f~v~~~~~~~L~v~V~d~d~ 339 (477)
....|.|+|+|++|++|+.+|..|.+||||+++++++. ++|+++++|+||.|||+|.|.+... .+.|.++|||+|.
T Consensus 13 ~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~---~kT~~~~~t~nP~Wne~f~f~v~~~-~~~l~~~v~d~d~ 88 (148)
T 3kwu_A 13 SKWSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTK---KRTKTIYGNLNPVWEENFHFECHNS-SDRIKVRVLDEDD 88 (148)
T ss_dssp --CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEE---EECCCCCSCSSCEEEEEEEEEECST-TCEEEEEEEECCC
T ss_pred cccccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEE---EECCccCCCCCCCcccEEEEEecCC-CCEEEEEEEECCC
Confidence 34579999999999999999999999999999997644 5999999999999999999999765 4789999999997
Q ss_pred C-----------CCCCeeEEEEEECcccCCCCceEEEEecccccCCCCCCCCccceEEEEEEEEE
Q 011813 340 V-----------GGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYV 393 (477)
Q Consensus 340 ~-----------~~d~~lG~~~v~L~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~y~ 393 (477)
. ++|++||++.++|.++. .....|++|.... ......|+|+++++|.
T Consensus 89 ~~~~~~~~~~~~~~~~~lG~~~i~l~~l~--~~~~~w~~L~~~~-----~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 89 DIKSRVKQRFKRESDDFLGQTIIEVRTLS--GEMDVWYNLDKRT-----DKSAVSGAIRLHISVE 146 (148)
T ss_dssp SHHHHHHTTTSSCSSEEEEEEEEEGGGCC--SEEEEEEECBCSS-----TTCCCCCEEEEEEEEE
T ss_pred CccccccccccCCCCccEEEEEEEHHHCc--CCCCEEEEcccCC-----CCCCCceEEEEEEEEE
Confidence 5 78999999999999994 3556788775421 1245789999999985
No 11
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.84 E-value=4.2e-20 Score=166.90 Aligned_cols=130 Identities=32% Similarity=0.498 Sum_probs=100.9
Q ss_pred cCCceEEEEEEEEccccccccccCCCCcEEEEEEcCccc---CceeeeeeCCCCCCeeeeEEEEEeecCCCCeEEEEEEe
Q 011813 260 KKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKL---PWKKTTVKKKNLNPEWNENFKLVVKEPESQILQLQVFD 336 (477)
Q Consensus 260 ~~~~G~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~~---~~~kT~v~~~t~nP~WnE~f~f~v~~~~~~~L~v~V~d 336 (477)
....|.|+|+|++|++|+.++..|.+||||++++++... ..++|+++++++||.|||+|.|.+.. ....|.|+|||
T Consensus 4 ~~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~-~~~~L~~~V~d 82 (176)
T 3m7f_B 4 NDDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLP-QRHRILFEVFD 82 (176)
T ss_dssp CTTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECT-TTCEEEEEEEE
T ss_pred CCCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcC-CCCEEEEEEEE
Confidence 346799999999999999999889999999999985322 35699999999999999999999975 35789999999
Q ss_pred cCCCCCCCeeEEEEEECcccCCCCce-E-----EEEecccccCCCCCCCCccceEEEEEEEEEec
Q 011813 337 WDKVGGHDRLGMQLVPLKLLTPHETK-E-----FTLDLLKHTNISDPKDMKQRGKIVVELTYVPF 395 (477)
Q Consensus 337 ~d~~~~d~~lG~~~v~L~~l~~~~~~-~-----~~~~l~~~~~~~~~~~~~~~G~l~l~l~y~p~ 395 (477)
++.+++|++||++.++|.++..+... + .|++|.... ...+..|+|+|+++|.|.
T Consensus 83 ~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~-----~~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 83 ENRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRS-----HKSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp CC----CEEEEEEEEESCSCCBC------CCCCEEEECBCSS-----TTCCCCSEEEEEEEECC-
T ss_pred CCCCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccC-----CCCccCEEEEEEEEEEeC
Confidence 99999999999999999999876443 1 677775431 135578999999999996
No 12
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.82 E-value=2.1e-19 Score=154.30 Aligned_cols=125 Identities=29% Similarity=0.433 Sum_probs=100.9
Q ss_pred CceEEEEEEEEccccccccccCCCCcEEEEEEcCcccCceeeeeeCCCCCCeeeeEEEEEeecCCCCeEEEEEEecCCCC
Q 011813 262 PVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEPESQILQLQVFDWDKVG 341 (477)
Q Consensus 262 ~~G~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~WnE~f~f~v~~~~~~~L~v~V~d~d~~~ 341 (477)
....|+|+|++|++|+.+|..|.+||||++++++.. ..++|+++++|+||+|||+|.|.+.+. +.|.|+|||+|.++
T Consensus 3 ~~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~-~~~kT~v~~~t~nP~wne~f~f~v~~~--~~l~~~v~d~d~~~ 79 (132)
T 3pyc_A 3 EFIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSG-QCHSTDTVKNTLDPKWNQHYDLYVGKT--DSITISVWNHKKIH 79 (132)
T ss_dssp SEEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTC-CEEECCCCSSCSSCEEEEEEEEEEETT--CCEEEEEEEGGGTT
T ss_pred CeEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCC-ceEECCccCCCCCCCccCEEEEEeCCC--CEEEEEEEECCCCC
Confidence 357899999999999999999999999999997642 457999999999999999999999764 35999999999887
Q ss_pred C---CCeeEEEEEECccc-CCCCceEEEEecccccCCCCCCCCccceEEEEEEEE
Q 011813 342 G---HDRLGMQLVPLKLL-TPHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTY 392 (477)
Q Consensus 342 ~---d~~lG~~~v~L~~l-~~~~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~y 392 (477)
+ |++||++.+++.++ ........+++|... .+. ...+..|+|++++++
T Consensus 80 ~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~-~~~--~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 80 KKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKL-NPS--DTDAVRGQIVVSLQT 131 (132)
T ss_dssp SSTTTTEEEEEEECHHHHHHHTTSCCEEEECBCS-STT--CCCCCCSEEEEEEEE
T ss_pred CCCCCCceEEEEEeHHHhhcccccCcEEEeeeec-CCC--CCCceeEEEEEEEEc
Confidence 6 89999999999988 333333466776542 111 124579999999875
No 13
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.80 E-value=8.3e-20 Score=161.25 Aligned_cols=111 Identities=14% Similarity=0.104 Sum_probs=95.9
Q ss_pred ccCCceEEEEEEEEccccccccccCCCCcEEEEEEcC---cccCceeeeeeCCCCCCeeeeEEEEEeecC--CCCeEEEE
Q 011813 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTG---EKLPWKKTTVKKKNLNPEWNENFKLVVKEP--ESQILQLQ 333 (477)
Q Consensus 259 ~~~~~G~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~---~~~~~~kT~v~~~t~nP~WnE~f~f~v~~~--~~~~L~v~ 333 (477)
.....+.|+|+|++|+||+++|..|.+||||++++.+ ....++||+++++|+||+|||+|.|.+... ....|.|+
T Consensus 38 y~~~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~ 117 (155)
T 2z0u_A 38 YDEKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVD 117 (155)
T ss_dssp EETTTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEE
T ss_pred EcCCCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEE
Confidence 4456799999999999999999999999999999986 333357999999999999999999998642 25689999
Q ss_pred EEecCCCCCCCeeEEEEEECcccCC-CCceEEEEecc
Q 011813 334 VFDWDKVGGHDRLGMQLVPLKLLTP-HETKEFTLDLL 369 (477)
Q Consensus 334 V~d~d~~~~d~~lG~~~v~L~~l~~-~~~~~~~~~l~ 369 (477)
|||+|.+++|++||++.++|+++.. +.....|++|.
T Consensus 118 V~d~d~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 118 VCTTDRSHLEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp EEEECTTSCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred EEECCCCCCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 9999999999999999999999964 56677888764
No 14
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.80 E-value=3.7e-19 Score=154.92 Aligned_cols=112 Identities=33% Similarity=0.430 Sum_probs=99.5
Q ss_pred ccCCceEEEEEEEEccccccccccCCCCcEEEEEEcCcccCceeeeeeCCCCCCeeeeEEEEEeecC--CCCeEEEEEEe
Q 011813 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEP--ESQILQLQVFD 336 (477)
Q Consensus 259 ~~~~~G~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~WnE~f~f~v~~~--~~~~L~v~V~d 336 (477)
.....+.|+|+|++|++|+..+..+.+||||++++.+.....++|+++++|.||+|||+|.|.+... ....|.|+|||
T Consensus 29 y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d 108 (143)
T 3f04_A 29 YDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYD 108 (143)
T ss_dssp EETTTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEE
T ss_pred EeCCCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEe
Confidence 4457799999999999999999889999999999976555568999999999999999999998632 35789999999
Q ss_pred cCCCCCCCeeEEEEEECcccCCCCceEEEEeccc
Q 011813 337 WDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLK 370 (477)
Q Consensus 337 ~d~~~~d~~lG~~~v~L~~l~~~~~~~~~~~l~~ 370 (477)
+|.+++|++||++.++|.++..+.....|++|.+
T Consensus 109 ~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 142 (143)
T 3f04_A 109 FDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 142 (143)
T ss_dssp CCSSSCCEEEEEEEEEGGGCCTTSCEEEEEECBC
T ss_pred CCCCCCCceEEEEEEEHHHccCCCCcceEEECcC
Confidence 9999999999999999999999888889998853
No 15
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.79 E-value=3.2e-19 Score=154.99 Aligned_cols=112 Identities=38% Similarity=0.548 Sum_probs=98.4
Q ss_pred ccCCceEEEEEEEEccccccccccCCCCcEEEEEEcCcccCceeeeeeCCCCCCeeeeEEEEEeec---CCCCeEEEEEE
Q 011813 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKE---PESQILQLQVF 335 (477)
Q Consensus 259 ~~~~~G~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~WnE~f~f~v~~---~~~~~L~v~V~ 335 (477)
.....+.|+|+|++|++|+.++..|.+||||++++.+.....++|+++++|.||+|||+|.|.+.. .....|.|+||
T Consensus 21 y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~ 100 (141)
T 2d8k_A 21 YNFQESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVL 100 (141)
T ss_dssp ECSSSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEE
T ss_pred EeCCCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEE
Confidence 445679999999999999999988999999999997654456799999999999999999998532 23578999999
Q ss_pred ecCCCCCCCeeEEEEEECcccCCCCceEEEEeccc
Q 011813 336 DWDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLK 370 (477)
Q Consensus 336 d~d~~~~d~~lG~~~v~L~~l~~~~~~~~~~~l~~ 370 (477)
|+|.+++|++||++.++|.++..+.....|++|.+
T Consensus 101 d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 135 (141)
T 2d8k_A 101 DYDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKP 135 (141)
T ss_dssp ECCSSSSCEEEEEEEEETTTSCTTSCEEEEECCEE
T ss_pred ECCCCCCCcEEEEEEEEhhhhcCCCCccEEEECcC
Confidence 99999999999999999999998888889998865
No 16
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.79 E-value=4.9e-19 Score=159.14 Aligned_cols=126 Identities=18% Similarity=0.252 Sum_probs=102.5
Q ss_pred cCCceEEEEEEEEccccccccccCCCCcEEEEEEcCcccCceeeeeeCCCCCCeeeeEEEEEeecCCCCeEEEEEEecCC
Q 011813 260 KKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEPESQILQLQVFDWDK 339 (477)
Q Consensus 260 ~~~~G~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~WnE~f~f~v~~~~~~~L~v~V~d~d~ 339 (477)
....+.|+|+|++|++|+..+..+.+||||++++++ ..++|+++++|+||+|||+|.|.+.. ...|.|+|||+|.
T Consensus 32 ~~~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~---~~~kT~v~~~tlnP~Wne~f~f~v~~--~~~L~~~V~D~d~ 106 (173)
T 2nq3_A 32 LTMKSQLQITVISAKLKENKKNWFGPSPYVEVTVDG---QSKKTEKCNNTNSPKWKQPLTVIVTP--VSKLHFRVWSHQT 106 (173)
T ss_dssp CSCCEEEEEEEEEEEECCCC--CCCCCEEEEEEETT---EEEECCCCSSCSSCEEEEEEEEEECT--TCEEEEEEEECCS
T ss_pred cCCceEEEEEEEEeECCCCcccCCCCCeEEEEEECC---EEeEccccCCCCCCeECCEEEEEeCC--CCEEEEEEEECCC
Confidence 345789999999999999444345599999999987 34699999999999999999999853 6799999999999
Q ss_pred CCCCCeeEEEEEECcccCCCC-----ceEEEEecccccCCCCCCCCccceEEEEEEEEEec
Q 011813 340 VGGHDRLGMQLVPLKLLTPHE-----TKEFTLDLLKHTNISDPKDMKQRGKIVVELTYVPF 395 (477)
Q Consensus 340 ~~~d~~lG~~~v~L~~l~~~~-----~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~y~p~ 395 (477)
+++|++||++.++|.++..+. ....|++|... . .+....|+|+++++|++.
T Consensus 107 ~~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~-~----~~~~~~G~L~v~l~~l~~ 162 (173)
T 2nq3_A 107 LKSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGD-K----EPTETIGDLSICLDGLQL 162 (173)
T ss_dssp SSCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEES-S----CTTSEEEEEEEEEESEEC
T ss_pred CCCCceEEEEEEEHHHhcccCCCCcceeEEEEECccC-C----CCCcccEEEEEEEeeeec
Confidence 999999999999999986432 12567777653 1 134678999999999985
No 17
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.79 E-value=6.3e-19 Score=155.18 Aligned_cols=112 Identities=33% Similarity=0.430 Sum_probs=99.0
Q ss_pred ccCCceEEEEEEEEccccccccccCCCCcEEEEEEcCcccCceeeeeeCCCCCCeeeeEEEEEeecC--CCCeEEEEEEe
Q 011813 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEP--ESQILQLQVFD 336 (477)
Q Consensus 259 ~~~~~G~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~WnE~f~f~v~~~--~~~~L~v~V~d 336 (477)
.....+.|+|+|++|++|+..+..+.+||||++++.+.....++|+++++|.||+|||+|.|.+... ....|.|+|||
T Consensus 37 y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d 116 (152)
T 1rsy_A 37 YDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYD 116 (152)
T ss_dssp EETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEE
T ss_pred EeCCCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEE
Confidence 4456799999999999999999889999999999976544567999999999999999999988632 35789999999
Q ss_pred cCCCCCCCeeEEEEEECcccCCCCceEEEEeccc
Q 011813 337 WDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLK 370 (477)
Q Consensus 337 ~d~~~~d~~lG~~~v~L~~l~~~~~~~~~~~l~~ 370 (477)
+|.+++|++||++.++|.++..+.....|++|..
T Consensus 117 ~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 150 (152)
T 1rsy_A 117 FDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 150 (152)
T ss_dssp CCSSSCCEEEEEEEEEGGGCCCSSCEEEEEECBC
T ss_pred CCCCCCCcEEEEEEEEchhccCCCCcceEEECCC
Confidence 9999999999999999999988888889998853
No 18
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.79 E-value=8.3e-19 Score=151.05 Aligned_cols=111 Identities=24% Similarity=0.282 Sum_probs=95.9
Q ss_pred ccCCceEEEEEEEEccccccccccCCCCcEEEEEEcCc--ccCceeeeeeCCCCCCeeeeEEEEE-eec--CCCCeEEEE
Q 011813 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE--KLPWKKTTVKKKNLNPEWNENFKLV-VKE--PESQILQLQ 333 (477)
Q Consensus 259 ~~~~~G~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~--~~~~~kT~v~~~t~nP~WnE~f~f~-v~~--~~~~~L~v~ 333 (477)
.....|.|+|+|++|++|+. +..|.+||||++++.+. ....++|+++++|+||+|||+|.|. +.. .....|.|+
T Consensus 15 ~~~~~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~ 93 (134)
T 2b3r_A 15 VSYRNGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLS 93 (134)
T ss_dssp EEEETTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEE
T ss_pred EeecCCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEE
Confidence 34456999999999999997 77889999999999543 3446799999999999999999999 753 245789999
Q ss_pred EEecCCCCCCCeeEEEEEECcccCCCCceEEEEeccc
Q 011813 334 VFDWDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLK 370 (477)
Q Consensus 334 V~d~d~~~~d~~lG~~~v~L~~l~~~~~~~~~~~l~~ 370 (477)
|||+|.+++|++||++.++|.++..+.....|++|..
T Consensus 94 V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 130 (134)
T 2b3r_A 94 VLSAESLRENFFLGGITLPLKDFNLSKETVKWYQLTA 130 (134)
T ss_dssp EEECCSSSCCEEEEEEEEEGGGSCTTSCEEEEEECBC
T ss_pred EEECCCCCCCcEEEEEEEEhhhccCCCCcceeEECCC
Confidence 9999999999999999999999998888889998854
No 19
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.77 E-value=3.1e-18 Score=148.18 Aligned_cols=112 Identities=25% Similarity=0.377 Sum_probs=95.0
Q ss_pred ccCCceEEEEEEEEcccccccccc-CCCCcEEEEEEcCcccCceeeeeeCCCCCCeeeeEEEEE-eecC--CCCeEEEEE
Q 011813 259 IKKPVGILHVKVVRASKLLKKDFL-GTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLV-VKEP--ESQILQLQV 334 (477)
Q Consensus 259 ~~~~~G~L~V~v~~A~~L~~~d~~-g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~WnE~f~f~-v~~~--~~~~L~v~V 334 (477)
.....+.|.|+|++|++|+.+|.. +.+||||++++.+.....++|+++++|+||+|||+|.|. +... ....|.|+|
T Consensus 17 y~~~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V 96 (138)
T 1ugk_A 17 YNFERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTI 96 (138)
T ss_dssp EEGGGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEE
T ss_pred EECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEE
Confidence 345679999999999999999985 899999999998654466899999999999999999996 6432 246899999
Q ss_pred EecCCCCCCCeeEEEEEECcccCCCCc-eEEEEeccc
Q 011813 335 FDWDKVGGHDRLGMQLVPLKLLTPHET-KEFTLDLLK 370 (477)
Q Consensus 335 ~d~d~~~~d~~lG~~~v~L~~l~~~~~-~~~~~~l~~ 370 (477)
||+|.+++|++||++.++|.++..+.. ...|+++.+
T Consensus 97 ~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~ 133 (138)
T 1ugk_A 97 LSFDRFSRDDIIGEVLIPLSGIELSEGKMLMNREIIS 133 (138)
T ss_dssp EEECSSCCCCCCEEEEEECTTCCCTTCCEEEEEECBS
T ss_pred EECCCCCCCcEEEEEEEehhHccCCCCcchhhhhhhc
Confidence 999999999999999999999987644 456787754
No 20
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.77 E-value=1.2e-17 Score=174.55 Aligned_cols=177 Identities=23% Similarity=0.318 Sum_probs=136.5
Q ss_pred eeEEEEEcCCCce-EEEEEEEeCccccc-ccchhHHHHHHHHHhhhccccC-----Cceeee-ecC--------------
Q 011813 195 FATMVVSLMERPH-VDFGIKILGGDIMS-IPGLYQFIQKCITKYVAGIYIW-----PQTYEI-PIL-------------- 252 (477)
Q Consensus 195 ~~~~~~sf~~~P~-id~~~~~~g~~~~~-iP~l~~~i~~~i~~~i~~~~v~-----P~~~~i-~i~-------------- 252 (477)
+..|.=|+...|. |++.+.|+ .++.. .+.....++.++.+++.+.-.+ |..-.. ++.
T Consensus 304 ~~~W~~Sv~~~P~~I~~~l~PI-~~Lv~~~~~kr~nLk~Ai~~Yl~e~~~c~~C~~PC~nn~~~l~g~~C~C~C~~~~~t 382 (540)
T 3nsj_A 304 FSTWTASLPSNPGLVDYSLEPL-HTLLEEQNPKREALRQAISHYIMSRARWQNCSRPCRSGQHKSSHDSCQCECQDSKVT 382 (540)
T ss_dssp HHHHHHHTTTSCEEEEEEEEEG-GGGSCTTCTHHHHHHHHHHHHHHHTCBCCCTTSCCBTTEEECSSCTTCEEESCTTTB
T ss_pred HHHHHHHHhhCCceEEEEEEEH-HHhcCCcHHHHHHHHHHHHHHHHhcCchhhhcccccCCCccCCCCceEeeCCCCCCc
Confidence 4556666677884 59999998 56554 4667789999999999887766 421111 121
Q ss_pred CcccccccCCceEEEEEEEEccccccccccCCCCcEEEEEEcCcccCceeeeeeCCCCCCeeeeEEEEEeec-CCCCeEE
Q 011813 253 DASSVAIKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKE-PESQILQ 331 (477)
Q Consensus 253 ~~~~~~~~~~~G~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~WnE~f~f~v~~-~~~~~L~ 331 (477)
...++......|.|+|+|++|++|+. |..|++||||+++++++. .+|+++++++||+|||+|.|.+.+ ...+.|+
T Consensus 383 ~~~~C~~~~~~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~~~---~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~ 458 (540)
T 3nsj_A 383 NQDCCPRQRGLAHLVVSNFRAEHLWG-DYTTATDAYLKVFFGGQE---FRTGVVWNNNNPRWTDKMDFENVLLSTGGPLR 458 (540)
T ss_dssp CGGGCBSSTTEEEEEEEEEEEESCCC-SSCSCCCEEEEEEETTEE---EECCCBCSCSSCBCCCCEEEEEEETTTCCCEE
T ss_pred ccccccccCcccEEEEEEEEccCCCc-ccCCCcCeEEEEEECCEe---eeeeeecCCCCCCCCeEEEEEEecCCCCCEEE
Confidence 11223455668999999999999998 989999999999998653 699999999999999999998653 3567899
Q ss_pred EEEEecCCCCCCCeeEEEEEECcccCCCCceEEEEecccccCCCCCCCCccceEEEEEEEEE
Q 011813 332 LQVFDWDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYV 393 (477)
Q Consensus 332 v~V~d~d~~~~d~~lG~~~v~L~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~y~ 393 (477)
|+|||+|..++||+||++.++|.. ...+.|+.+ ..|+|+++++..
T Consensus 459 ~~V~D~D~~~~dD~LG~~~~~L~~----g~~~~~~~l-------------~~G~l~~~~~~~ 503 (540)
T 3nsj_A 459 VQVWDADYGWDDDLLGSCDRSPHS----GFHEVTCEL-------------NHGRVKFSYHAK 503 (540)
T ss_dssp EEEEECCSSSCCEEEEEEEECCCS----EEEEEEEEC-------------SSSEEEEEEEEE
T ss_pred EEEEECCCCCCCCEEEEEEEEeeC----CcEEEEEEc-------------CCeEEEEEEEEE
Confidence 999999999999999999999882 235566654 258888887644
No 21
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.76 E-value=3.4e-18 Score=147.98 Aligned_cols=109 Identities=21% Similarity=0.195 Sum_probs=93.2
Q ss_pred ccCCceEEEEEEEEccccccccccCCCCcEEEEEEcCc-ccCceeeeeeCCCCCCeeeeEEEEEeecC--CCCeEEEEEE
Q 011813 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE-KLPWKKTTVKKKNLNPEWNENFKLVVKEP--ESQILQLQVF 335 (477)
Q Consensus 259 ~~~~~G~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~-~~~~~kT~v~~~t~nP~WnE~f~f~v~~~--~~~~L~v~V~ 335 (477)
.....+.|+|+|++|++ +|..|.+||||++++.+. ....++|+++++|+||+|||+|.|.+... ....|.|+||
T Consensus 21 y~~~~~~L~V~v~~a~~---~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~ 97 (138)
T 1wfm_A 21 YDCQKAELFVTRLEAVT---SNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLR 97 (138)
T ss_dssp EETTTTEEEEEEEEEEC---CCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEE
T ss_pred EeCCCCEEEEEEEEEEc---CCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEE
Confidence 45567999999999993 677899999999999642 33357999999999999999999998643 2568999999
Q ss_pred ecCCCCCCCeeEEEEEECcccCCCCceEEEEeccc
Q 011813 336 DWDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLK 370 (477)
Q Consensus 336 d~d~~~~d~~lG~~~v~L~~l~~~~~~~~~~~l~~ 370 (477)
|+|.+++|++||++.++|.++..+.....|++|..
T Consensus 98 d~d~~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~ 132 (138)
T 1wfm_A 98 TCDRFSRHSVAGELRLGLDGTSVPLGAAQWGELKT 132 (138)
T ss_dssp ECCSSCTTSCSEEEEEESSSSSSCTTCCEEEECCC
T ss_pred ECCCCCCCcEEEEEEEEcccccCcccccceeeCcC
Confidence 99999999999999999999987777788998865
No 22
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.75 E-value=1.8e-18 Score=151.40 Aligned_cols=112 Identities=27% Similarity=0.360 Sum_probs=94.8
Q ss_pred ccCCceEEEEEEEEccccccc-cc------cCCCCcEEEEEEcCcccCceeeeeeCCCCCCeeeeEEEEEeecC--CCCe
Q 011813 259 IKKPVGILHVKVVRASKLLKK-DF------LGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEP--ESQI 329 (477)
Q Consensus 259 ~~~~~G~L~V~v~~A~~L~~~-d~------~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~WnE~f~f~v~~~--~~~~ 329 (477)
.....|.|+|+|++|++|+.. +. .+.+||||++++.+.....++|+++++|+||+|||+|.|.+... ....
T Consensus 21 y~~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~ 100 (147)
T 2enp_A 21 YDLLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRT 100 (147)
T ss_dssp EETTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSE
T ss_pred EcCCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChHHhccCE
Confidence 455679999999999999984 33 35899999999986544567999999999999999999998632 2458
Q ss_pred EEEEEEecCCCCCCCeeEEEEEECcccCCCCceEEEEeccc
Q 011813 330 LQLQVFDWDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLK 370 (477)
Q Consensus 330 L~v~V~d~d~~~~d~~lG~~~v~L~~l~~~~~~~~~~~l~~ 370 (477)
|.|+|||+|.+++|++||++.++|.++..+.....|+.|.+
T Consensus 101 L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~ 141 (147)
T 2enp_A 101 LLLTVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALIP 141 (147)
T ss_dssp EEEEEECCSTTCCSCCCEEEEEETTTSCTTTCCCEEECCBC
T ss_pred EEEEEEECCCCcCCcEEEEEEEechhcCCCCCccEEEEeec
Confidence 99999999999999999999999999987776678887754
No 23
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.75 E-value=3.2e-18 Score=146.14 Aligned_cols=109 Identities=24% Similarity=0.359 Sum_probs=88.1
Q ss_pred ccCCceEEEEEEEEccccccccccCCCCcEEEEEEcCcc--cCceeeeeeCCCCCCeeeeEEEEEee---cCCCCeEEEE
Q 011813 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEK--LPWKKTTVKKKNLNPEWNENFKLVVK---EPESQILQLQ 333 (477)
Q Consensus 259 ~~~~~G~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~--~~~~kT~v~~~t~nP~WnE~f~f~v~---~~~~~~L~v~ 333 (477)
.....|.|.|+|++|++|+.++..|.+||||++++.+.. ...++|+++++|.||+|||+|.|.+. +.....|.|+
T Consensus 13 y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~ 92 (129)
T 2bwq_A 13 FDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEIT 92 (129)
T ss_dssp EETTTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEE
T ss_pred EccCCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEE
Confidence 445679999999999999999988999999999995432 34579999999999999999999953 2235789999
Q ss_pred EEecCCCCC--CCeeEEEEEECcccCCCCceEEEEec
Q 011813 334 VFDWDKVGG--HDRLGMQLVPLKLLTPHETKEFTLDL 368 (477)
Q Consensus 334 V~d~d~~~~--d~~lG~~~v~L~~l~~~~~~~~~~~l 368 (477)
|||+|..++ |++||++.++|.++..+. ...|++|
T Consensus 93 V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L 128 (129)
T 2bwq_A 93 LWDQARVREEESEFLGEILIELETALLDD-EPHWYKL 128 (129)
T ss_dssp EEEC-------CEEEEEEEEEGGGCCCSS-CEEEEEC
T ss_pred EEECCcCcCcCCceeEEEEEEccccCCCc-CCccEEC
Confidence 999999887 999999999999987654 6678775
No 24
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.75 E-value=3.4e-18 Score=148.62 Aligned_cols=112 Identities=30% Similarity=0.446 Sum_probs=96.9
Q ss_pred ccCCceEEEEEEEEccccccccccCCCCcEEEEEEcCc--ccCceeeeeeCCCCCCeeeeEEEEE-eecC--CCCeEEEE
Q 011813 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE--KLPWKKTTVKKKNLNPEWNENFKLV-VKEP--ESQILQLQ 333 (477)
Q Consensus 259 ~~~~~G~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~--~~~~~kT~v~~~t~nP~WnE~f~f~-v~~~--~~~~L~v~ 333 (477)
.....+.|.|+|++|++|+..+..|.+||||++++.+. ....++|+++++|.||+|||+|.|. +... ....|.|+
T Consensus 24 y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~ 103 (142)
T 2chd_A 24 YDQDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRIS 103 (142)
T ss_dssp EEGGGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEE
T ss_pred EeCCCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEE
Confidence 34567999999999999999998899999999999753 2346799999999999999999998 5421 13689999
Q ss_pred EEecCCCCCCCeeEEEEEECcccCCCCceEEEEeccc
Q 011813 334 VFDWDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLK 370 (477)
Q Consensus 334 V~d~d~~~~d~~lG~~~v~L~~l~~~~~~~~~~~l~~ 370 (477)
|||+|.+++|++||++.++|.++..+.....|++|..
T Consensus 104 V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 140 (142)
T 2chd_A 104 VCDEDKFGHNEFIGETRFSLKKLKANQRKNFNICLER 140 (142)
T ss_dssp EEEECTTSCEEEEEEEEEEGGGCCTTCCEEEEEECBC
T ss_pred EEECCCCCCCcEEEEEEEEHHHcCCCCccEEEEeccc
Confidence 9999999999999999999999999888899988753
No 25
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.75 E-value=1.7e-18 Score=151.73 Aligned_cols=113 Identities=24% Similarity=0.342 Sum_probs=97.8
Q ss_pred ccCCceEEEEEEEEcccccccc-ccCCCCcEEEEEEcCcc--cCceeeeeeCCCCCCeeeeEEEEEeecCC--CCeEEEE
Q 011813 259 IKKPVGILHVKVVRASKLLKKD-FLGTSDPYVKLSLTGEK--LPWKKTTVKKKNLNPEWNENFKLVVKEPE--SQILQLQ 333 (477)
Q Consensus 259 ~~~~~G~L~V~v~~A~~L~~~d-~~g~~dpyv~v~l~~~~--~~~~kT~v~~~t~nP~WnE~f~f~v~~~~--~~~L~v~ 333 (477)
.....|.|.|+|++|++|+..+ ..+.+||||++++.+.. ...++|+++++|+||+|||+|.|.+.... ...|.|+
T Consensus 18 y~~~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~ 97 (148)
T 3fdw_A 18 YEQQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFS 97 (148)
T ss_dssp EETTTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEE
T ss_pred EeCCCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEE
Confidence 4556799999999999999888 57899999999997543 23679999999999999999999986532 4579999
Q ss_pred EEecCCCCCCCeeEEEEEECcccCCCCceEEEEecccc
Q 011813 334 VFDWDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLKH 371 (477)
Q Consensus 334 V~d~d~~~~d~~lG~~~v~L~~l~~~~~~~~~~~l~~~ 371 (477)
|||+|.+++|++||++.++|.++..+.....|++|...
T Consensus 98 V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 135 (148)
T 3fdw_A 98 VWHHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGK 135 (148)
T ss_dssp EEEECGGGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC
T ss_pred EEECCCCcCCcEEEEEEEEcccccccCCccceEECcCc
Confidence 99999999999999999999999877777899998653
No 26
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.75 E-value=2.7e-18 Score=149.22 Aligned_cols=111 Identities=29% Similarity=0.306 Sum_probs=93.7
Q ss_pred ccCCceEEEEEEEEccccccccccCCCCcEEEEEEcCcc--cCceeeeeeCCCCCCeeeeEEEEEeecC--CCCeEEEEE
Q 011813 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEK--LPWKKTTVKKKNLNPEWNENFKLVVKEP--ESQILQLQV 334 (477)
Q Consensus 259 ~~~~~G~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~--~~~~kT~v~~~t~nP~WnE~f~f~v~~~--~~~~L~v~V 334 (477)
.....+.|.|+|++|++|+.++..| +||||++++.+.. ...++|+++++|+||+|||+|.|.+... ....|.|+|
T Consensus 19 y~~~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V 97 (142)
T 2dmg_A 19 HSSQRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAV 97 (142)
T ss_dssp EETTTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEE
T ss_pred EeCCCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEE
Confidence 3456799999999999999999888 9999999996533 2567999999999999999999998532 245899999
Q ss_pred EecCCCCC--CCeeEEEEEECcccCCCCceEEEEeccc
Q 011813 335 FDWDKVGG--HDRLGMQLVPLKLLTPHETKEFTLDLLK 370 (477)
Q Consensus 335 ~d~d~~~~--d~~lG~~~v~L~~l~~~~~~~~~~~l~~ 370 (477)
||+|.++. |++||++.++|.++..+.....|++|..
T Consensus 98 ~d~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~ 135 (142)
T 2dmg_A 98 KNSGGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTE 135 (142)
T ss_dssp EECCCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBC
T ss_pred EECCCccccCCcEEEEEEEecccccccccccceeeccC
Confidence 99998763 5799999999999987777778888764
No 27
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.75 E-value=7.8e-18 Score=147.62 Aligned_cols=107 Identities=35% Similarity=0.501 Sum_probs=93.5
Q ss_pred ceEEEEEEEEccccccccccCCCCcEEEEEEcCcc--cCceeeeeeCCCCCCeeeeEEEEEeecCC-CCeEEEEEEecCC
Q 011813 263 VGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEK--LPWKKTTVKKKNLNPEWNENFKLVVKEPE-SQILQLQVFDWDK 339 (477)
Q Consensus 263 ~G~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~--~~~~kT~v~~~t~nP~WnE~f~f~v~~~~-~~~L~v~V~d~d~ 339 (477)
.|.|+|+|++|++|+..+..+.+||||++++.+.. ...++|+++++|.||+|||+|.|.+.... ...|.|+|||+|.
T Consensus 30 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~ 109 (149)
T 1a25_A 30 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 109 (149)
T ss_dssp SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECCS
T ss_pred CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECCC
Confidence 58899999999999999988999999999997532 34579999999999999999999987532 4689999999999
Q ss_pred CCCCCeeEEEEEECcccCCCCceEEEEeccc
Q 011813 340 VGGHDRLGMQLVPLKLLTPHETKEFTLDLLK 370 (477)
Q Consensus 340 ~~~d~~lG~~~v~L~~l~~~~~~~~~~~l~~ 370 (477)
+++|++||++.++|.++..+ ....|++|..
T Consensus 110 ~~~~~~iG~~~i~l~~l~~~-~~~~W~~L~~ 139 (149)
T 1a25_A 110 TSRNDFMGSLSFGISELQKA-GVDGWFKLLS 139 (149)
T ss_dssp SSCCEEEEEEEEEHHHHTTC-CEEEEEECBC
T ss_pred CCCCCEEEEEEEEHHHhCcC-ccCCeEEccC
Confidence 99999999999999999876 4678888854
No 28
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.74 E-value=6e-18 Score=145.95 Aligned_cols=108 Identities=32% Similarity=0.494 Sum_probs=93.7
Q ss_pred CceEEEEEEEEccccccccccCCCCcEEEEEEcCc--ccCceeeeeeCCCCCCeeeeEEEEEeecCC-CCeEEEEEEecC
Q 011813 262 PVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE--KLPWKKTTVKKKNLNPEWNENFKLVVKEPE-SQILQLQVFDWD 338 (477)
Q Consensus 262 ~~G~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~--~~~~~kT~v~~~t~nP~WnE~f~f~v~~~~-~~~L~v~V~d~d 338 (477)
..|.|.|+|++|++|+..+..|.+||||++++.+. ....++|+++++|.||.|||+|.|.+.... ...|.|+|||+|
T Consensus 14 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d 93 (137)
T 3rdl_A 14 TDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWD 93 (137)
T ss_dssp ETTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECC
T ss_pred cCCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECC
Confidence 45999999999999999998999999999999643 334579999999999999999999986432 458999999999
Q ss_pred CCCCCCeeEEEEEECcccCCCCceEEEEeccc
Q 011813 339 KVGGHDRLGMQLVPLKLLTPHETKEFTLDLLK 370 (477)
Q Consensus 339 ~~~~d~~lG~~~v~L~~l~~~~~~~~~~~l~~ 370 (477)
..++|++||++.++|+++..+. ...|++|..
T Consensus 94 ~~~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~ 124 (137)
T 3rdl_A 94 RTTRNDFMGSLSFGVSELMKMP-ASGWYKLLN 124 (137)
T ss_dssp SSSCCEEEEEEEEEHHHHHHSC-EEEEEECBC
T ss_pred CCCCCceEEEEEEeHHHhccCc-cCceEECcC
Confidence 9999999999999999997655 778888854
No 29
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.74 E-value=1.9e-18 Score=150.23 Aligned_cols=108 Identities=28% Similarity=0.443 Sum_probs=93.7
Q ss_pred ceEEEEEEEEccccccccccCCCCcEEEEEEcCccc-----------CceeeeeeCCCCCCeeeeEEEEE-ee--cCCCC
Q 011813 263 VGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKL-----------PWKKTTVKKKNLNPEWNENFKLV-VK--EPESQ 328 (477)
Q Consensus 263 ~G~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~~-----------~~~kT~v~~~t~nP~WnE~f~f~-v~--~~~~~ 328 (477)
.|.|+|+|++|++|+.+|..|.+||||++++.+... ..++|+++++|+||+|||+|.|. +. +....
T Consensus 17 ~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~ 96 (142)
T 1rh8_A 17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKK 96 (142)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTC
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCC
Confidence 589999999999999999899999999999987531 24689999999999999999997 54 22467
Q ss_pred eEEEEEEecCCCCCCCeeEEEEEECcccCCCCceEEEEeccc
Q 011813 329 ILQLQVFDWDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLK 370 (477)
Q Consensus 329 ~L~v~V~d~d~~~~d~~lG~~~v~L~~l~~~~~~~~~~~l~~ 370 (477)
.|.|+|||+|.+++|++||++.++|.++..+.....|++|..
T Consensus 97 ~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 138 (142)
T 1rh8_A 97 TLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKE 138 (142)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBC
T ss_pred EEEEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECCc
Confidence 899999999999999999999999999987666778888754
No 30
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.74 E-value=6.3e-18 Score=151.82 Aligned_cols=109 Identities=26% Similarity=0.354 Sum_probs=95.0
Q ss_pred CceEEEEEEEEccccccccc-cCCCCcEEEEEEcCcc--cCceeeeeeCCCCCCeeeeEEEEEeecCCCCeEEEEEE-ec
Q 011813 262 PVGILHVKVVRASKLLKKDF-LGTSDPYVKLSLTGEK--LPWKKTTVKKKNLNPEWNENFKLVVKEPESQILQLQVF-DW 337 (477)
Q Consensus 262 ~~G~L~V~v~~A~~L~~~d~-~g~~dpyv~v~l~~~~--~~~~kT~v~~~t~nP~WnE~f~f~v~~~~~~~L~v~V~-d~ 337 (477)
..|.|.|+|++|++|+.+|. .|.+||||++++.++. ...++|+++++|+||+|||+|.|.+.. ....|.|+|| |+
T Consensus 28 ~~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~-~~~~L~~~V~~d~ 106 (171)
T 2q3x_A 28 KKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESP-QGKVLQVIVWGDY 106 (171)
T ss_dssp ETTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCC-TTEEEEEEEEEEC
T ss_pred CCCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecC-CCCEEEEEEEEcC
Confidence 46999999999999999985 6899999999997542 235789999999999999999999854 4678999999 99
Q ss_pred CCCCCCCeeEEEEEECcccCCCCceEEEEecccc
Q 011813 338 DKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLKH 371 (477)
Q Consensus 338 d~~~~d~~lG~~~v~L~~l~~~~~~~~~~~l~~~ 371 (477)
|.+++|++||++.++|.++..+.....|++|...
T Consensus 107 d~~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 140 (171)
T 2q3x_A 107 GRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPP 140 (171)
T ss_dssp STTCSSEEEEEEEECGGGSCTTSCEEEEEECBCG
T ss_pred CCCCCCCEEEEEEEEHHHcccCCCcceeEECCCc
Confidence 9999999999999999999988888899998653
No 31
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.73 E-value=6.3e-18 Score=146.57 Aligned_cols=111 Identities=23% Similarity=0.355 Sum_probs=94.0
Q ss_pred ccCCceEEEEEEEEccccccccccCCCCcEEEEEEcCcc--cCceeeeeeCCCCCCeeeeEEEEEe-e--cCCCCeEEEE
Q 011813 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEK--LPWKKTTVKKKNLNPEWNENFKLVV-K--EPESQILQLQ 333 (477)
Q Consensus 259 ~~~~~G~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~--~~~~kT~v~~~t~nP~WnE~f~f~v-~--~~~~~~L~v~ 333 (477)
.....+.|+|+|++|++|+.++..+.+||||++++.+.. ...++|+++++|+||+|||+|.|.+ . +.....|.|+
T Consensus 16 y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~ 95 (141)
T 1v27_A 16 FDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEIT 95 (141)
T ss_dssp EETTTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEE
T ss_pred EeCCCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEE
Confidence 345569999999999999999988999999999995432 3457999999999999999999994 3 2235789999
Q ss_pred EEecCCCCC--CCeeEEEEEECcccCCCCceEEEEeccc
Q 011813 334 VFDWDKVGG--HDRLGMQLVPLKLLTPHETKEFTLDLLK 370 (477)
Q Consensus 334 V~d~d~~~~--d~~lG~~~v~L~~l~~~~~~~~~~~l~~ 370 (477)
|||+|..++ |++||++.++|.++..+. ...|++|..
T Consensus 96 V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~~ 133 (141)
T 1v27_A 96 LWDQARVREEESEFLGEILIELETALLDD-EPHWYKLQT 133 (141)
T ss_dssp EEEBCSSSSCCBCCCEEEEEEGGGCCCSS-EEEEEECBC
T ss_pred EEECCCCcCCCCceEEEEEEEccccCCCC-CCceEECcc
Confidence 999999887 999999999999987654 778998865
No 32
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.73 E-value=1.7e-17 Score=146.22 Aligned_cols=111 Identities=26% Similarity=0.362 Sum_probs=94.1
Q ss_pred ccCCceEEEEEEEEccccccccccCCCCcEEEEEEcCc--ccCceeeeeeCCCCCCeeeeEEEEEeecC-CCCeEEEEEE
Q 011813 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE--KLPWKKTTVKKKNLNPEWNENFKLVVKEP-ESQILQLQVF 335 (477)
Q Consensus 259 ~~~~~G~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~--~~~~~kT~v~~~t~nP~WnE~f~f~v~~~-~~~~L~v~V~ 335 (477)
.....|.|.|+|++|++|+..+ .|.+||||++++.+. ....++|+++++|+||+|||+|.|.+... ....|.|+||
T Consensus 22 y~~~~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~ 100 (153)
T 3fbk_A 22 IDAQDRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVW 100 (153)
T ss_dssp EEESSSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEEE
T ss_pred EECCCCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEEEE
Confidence 4567899999999999999998 699999999999643 23457999999999999999999998422 2356999999
Q ss_pred ecCCCCC-CCeeEEEEEECcccCC-CCceEEEEeccc
Q 011813 336 DWDKVGG-HDRLGMQLVPLKLLTP-HETKEFTLDLLK 370 (477)
Q Consensus 336 d~d~~~~-d~~lG~~~v~L~~l~~-~~~~~~~~~l~~ 370 (477)
|+|.+++ |++||++.++|.++.. +.....|++|..
T Consensus 101 d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~ 137 (153)
T 3fbk_A 101 NRASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLG 137 (153)
T ss_dssp ECCSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBC
T ss_pred eCCCCCCCCcEEEEEEEEHHHhcCCCCccccEEECCC
Confidence 9998877 9999999999999984 677888998865
No 33
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.71 E-value=4.7e-17 Score=144.25 Aligned_cols=112 Identities=35% Similarity=0.475 Sum_probs=92.8
Q ss_pred ccCCceEEEEEEEEccccccccccCCCCcEEEEEEcCc--ccCceeeeeeCCCCCCeeeeEEEEEeecC--CCCeEEEEE
Q 011813 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE--KLPWKKTTVKKKNLNPEWNENFKLVVKEP--ESQILQLQV 334 (477)
Q Consensus 259 ~~~~~G~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~--~~~~~kT~v~~~t~nP~WnE~f~f~v~~~--~~~~L~v~V 334 (477)
.....|.|.|+|++|+||+..+..|.+||||++++.+. ....++|+++++|+||+|||+|.|.+... ....|.|+|
T Consensus 20 y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V 99 (159)
T 1tjx_A 20 YVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTV 99 (159)
T ss_dssp EETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEE
T ss_pred EcCCCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEE
Confidence 44567999999999999999998899999999999743 22457999999999999999999998643 246799999
Q ss_pred EecCCCCCCCeeEEEEEECccc------------CCCCceEEEEeccc
Q 011813 335 FDWDKVGGHDRLGMQLVPLKLL------------TPHETKEFTLDLLK 370 (477)
Q Consensus 335 ~d~d~~~~d~~lG~~~v~L~~l------------~~~~~~~~~~~l~~ 370 (477)
||+|.+++|++||++.+++..+ .++.....|++|..
T Consensus 100 ~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~~L~~ 147 (159)
T 1tjx_A 100 LDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQV 147 (159)
T ss_dssp EECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEEECBC
T ss_pred EECCCCCCCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEEECcC
Confidence 9999999999999999999864 23345567776643
No 34
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.71 E-value=2.7e-17 Score=141.94 Aligned_cols=99 Identities=32% Similarity=0.460 Sum_probs=85.9
Q ss_pred ccCCceEEEEEEEEccccccccccCCCCcEEEEEEcCc--ccCceeeeeeCCCCCCeeeeEEEEEeecCC--CCeEEEEE
Q 011813 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE--KLPWKKTTVKKKNLNPEWNENFKLVVKEPE--SQILQLQV 334 (477)
Q Consensus 259 ~~~~~G~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~--~~~~~kT~v~~~t~nP~WnE~f~f~v~~~~--~~~L~v~V 334 (477)
.....|.|.|+|++|++|+..+..|.+||||++++.+. ....++|+++++|.||.|||+|.|.+.... ...|.|+|
T Consensus 11 y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V 90 (138)
T 3n5a_A 11 YNPSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITV 90 (138)
T ss_dssp EETTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEE
T ss_pred EcCCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEE
Confidence 34567999999999999999998899999999999754 223578999999999999999999986432 36899999
Q ss_pred EecCCCCCCCeeEEEEEECcccC
Q 011813 335 FDWDKVGGHDRLGMQLVPLKLLT 357 (477)
Q Consensus 335 ~d~d~~~~d~~lG~~~v~L~~l~ 357 (477)
||+|.+++|++||++.++|.++.
T Consensus 91 ~d~~~~~~~~~lG~~~i~l~~~~ 113 (138)
T 3n5a_A 91 MDKDKLSRNDVIGKIYLSWKSGP 113 (138)
T ss_dssp EECCSSSCCEEEEEEEESSSSCH
T ss_pred EECCCCCCCcEEEEEEEccccCC
Confidence 99999999999999999998754
No 35
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.71 E-value=9.2e-17 Score=137.56 Aligned_cols=119 Identities=18% Similarity=0.251 Sum_probs=85.0
Q ss_pred CCceEEEEEEEEccccccccccCCCCcEEEEEEcCcccCceeeeee-CCCCCCeeeeEEEEEeecCCCCeEEEEEEecCC
Q 011813 261 KPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVK-KKNLNPEWNENFKLVVKEPESQILQLQVFDWDK 339 (477)
Q Consensus 261 ~~~G~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~-~~t~nP~WnE~f~f~v~~~~~~~L~v~V~d~d~ 339 (477)
.+.|.|+|+|++|++++. .|.+||||+++ . +. .+|+++ .+|.||+|||+|.|.+.+. ...|.|+|||+|
T Consensus 2 ~~~~~L~V~V~~A~~l~~---~g~~DPYv~v~-~-~~---~kt~~~~~~t~nP~WnE~f~f~v~~~-~~~L~~~V~D~d- 71 (131)
T 2cjt_A 2 GVMSLLCVGVKKAKFDGA---QEKFNTYVTLK-V-QN---VKSTTIAVRGSQPSWEQDFMFEINRL-DLGLTVEVWNKG- 71 (131)
T ss_dssp CCCEEEEEEEEEEECSSC---GGGCEEEEEEE-E-TT---EEEECCCEESSSCEEEEEEEEEECCC-SSEEEEEEEECC-
T ss_pred CcceEEEEEEEEeECCCC---CCCcCeEEEEE-e-cC---EEEeEecCCCCCceECCEEEEEEeCC-CCeEEEEEEECC-
Confidence 356999999999998853 57899999999 2 22 245544 4799999999999999864 457999999999
Q ss_pred CCCCCeeEEEEEECcccCCCC--ceEEEEecccccCCCCCCCCcc-------ceEEEEEEEE
Q 011813 340 VGGHDRLGMQLVPLKLLTPHE--TKEFTLDLLKHTNISDPKDMKQ-------RGKIVVELTY 392 (477)
Q Consensus 340 ~~~d~~lG~~~v~L~~l~~~~--~~~~~~~l~~~~~~~~~~~~~~-------~G~l~l~l~y 392 (477)
+++|++||++.++|.++.... ....|.++...... .+++. .+.+.++++|
T Consensus 72 ~~~dd~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~---~~g~~~G~~~p~~~~~~~~~~~ 130 (131)
T 2cjt_A 72 LIWDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIM---ADSEICGTKDPTFHRILLDAHF 130 (131)
T ss_dssp SSCEEEEEEEEEEGGGSCBCSSCCCCEEEECBC-------------CCSCCCCCEEEEEEEE
T ss_pred CCCCCeEEEEEEEHHHhhhcCCCCccccEEccccccc---CCCcCcceECCCccEEEEEEEe
Confidence 889999999999999986443 11245554433211 11233 3458887776
No 36
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.70 E-value=1.1e-16 Score=142.81 Aligned_cols=99 Identities=33% Similarity=0.441 Sum_probs=86.7
Q ss_pred ccCCceEEEEEEEEccccccccccCCCCcEEEEEEcCcc--cCceeeeeeCCCCCCeeeeEEEEEeecC--CCCeEEEEE
Q 011813 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEK--LPWKKTTVKKKNLNPEWNENFKLVVKEP--ESQILQLQV 334 (477)
Q Consensus 259 ~~~~~G~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~--~~~~kT~v~~~t~nP~WnE~f~f~v~~~--~~~~L~v~V 334 (477)
.....|.|.|+|++|++|+.++..|.+||||++++.+.. ...++|+++++|+||+|||+|.|.+... ....|.|+|
T Consensus 32 y~~~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V 111 (166)
T 2cm5_A 32 YSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISV 111 (166)
T ss_dssp EETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEE
T ss_pred EECCCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEE
Confidence 455679999999999999999988999999999998642 3467999999999999999999998642 256899999
Q ss_pred EecCCCCCCCeeEEEEEECcccC
Q 011813 335 FDWDKVGGHDRLGMQLVPLKLLT 357 (477)
Q Consensus 335 ~d~d~~~~d~~lG~~~v~L~~l~ 357 (477)
||+|.+++|++||++.++|.++.
T Consensus 112 ~d~d~~~~~~~iG~~~i~l~~~~ 134 (166)
T 2cm5_A 112 WDYDIGKSNDYIGGCQLGISAKG 134 (166)
T ss_dssp EECCSSSCCEEEEEEEEETTCCH
T ss_pred EECCCCCCCcEEEeEEEecccCC
Confidence 99999999999999999999863
No 37
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.68 E-value=1.8e-16 Score=134.33 Aligned_cols=119 Identities=19% Similarity=0.313 Sum_probs=100.5
Q ss_pred ceEEEEEEEEccccccccccCCCCcEEEEEEcCcccCceeeeeeC-CCCCCeeeeEEEEEeecC--CCCeEEEEEEecCC
Q 011813 263 VGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKK-KNLNPEWNENFKLVVKEP--ESQILQLQVFDWDK 339 (477)
Q Consensus 263 ~G~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~-~t~nP~WnE~f~f~v~~~--~~~~L~v~V~d~d~ 339 (477)
.-.|+|+|.+|.+|+ |++|||+++.+.+.+ ++|++++ ++.||+|||.|.|++..+ .+..|.+.|||+++
T Consensus 20 ~msL~V~l~~a~~Lp-----g~~Dp~akv~FRg~k---~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~ 91 (144)
T 3l9b_A 20 HMALIVHLKTVSELR-----GRADRIAKVTFRGQS---FYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSK 91 (144)
T ss_dssp CEEEEEEEEEEESCC-----SCEEEEEEEEETTEE---EECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECT
T ss_pred cEEEEEEEEEecCCC-----CCCCCeEEEEEeccc---eeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECcc
Confidence 456999999999998 578999999997544 5999998 699999999999998753 26789999999999
Q ss_pred CCCCCeeEEEEEECcccCCCCceEEEEecccccCCCCCCCCccceEEEEEEEEEec
Q 011813 340 VGGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYVPF 395 (477)
Q Consensus 340 ~~~d~~lG~~~v~L~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~y~p~ 395 (477)
+++|++||++.++|+++..++....+..|... +.....++|.++++|.|.
T Consensus 92 v~~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~------n~~~~~a~I~l~l~Y~pp 141 (144)
T 3l9b_A 92 VFSNKLIGTFRMVLQKVVEENRVEVSDTLIDD------NNAIIKTSLSMEVRYQAA 141 (144)
T ss_dssp TSCCEEEEEEEEESHHHHHHSEEEEEEEEECT------TSCEEEEEEEEEEEEEET
T ss_pred ccCCCEEEEEEEEhHHhccCCeEEEeecccCC------CCCccccEEEEEEEecCC
Confidence 99999999999999999987777766665431 234456899999999994
No 38
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.68 E-value=7.8e-17 Score=141.85 Aligned_cols=97 Identities=29% Similarity=0.374 Sum_probs=79.4
Q ss_pred ccCCceEEEEEEEEccccccccccCCCCcEEEEEEcCc--ccCceeeeeeCCCCCCeeeeEEEEEeecCC--CCeEEEEE
Q 011813 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE--KLPWKKTTVKKKNLNPEWNENFKLVVKEPE--SQILQLQV 334 (477)
Q Consensus 259 ~~~~~G~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~--~~~~~kT~v~~~t~nP~WnE~f~f~v~~~~--~~~L~v~V 334 (477)
.....+.|.|+|++|++|+..+..|.+||||++++.++ ....++|+++++|+||+|||+|.|.+.... ...|.|+|
T Consensus 25 y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V 104 (153)
T 1w15_A 25 YQSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLV 104 (153)
T ss_dssp EETTTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEE
T ss_pred EcCCCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEE
Confidence 44567999999999999999998899999999999543 223569999999999999999999987542 46899999
Q ss_pred EecCCCCCCCeeEEEEEECcc
Q 011813 335 FDWDKVGGHDRLGMQLVPLKL 355 (477)
Q Consensus 335 ~d~d~~~~d~~lG~~~v~L~~ 355 (477)
||+|.+++|++||++.+++.+
T Consensus 105 ~d~d~~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 105 LDSERGSRNEVIGRLVLGATA 125 (153)
T ss_dssp EECCTTSCCEEEEEEEESTTC
T ss_pred EeCCCCCCCcEEEEEEECCCC
Confidence 999999999999999999988
No 39
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.66 E-value=2.4e-16 Score=165.78 Aligned_cols=121 Identities=26% Similarity=0.417 Sum_probs=103.3
Q ss_pred cCCceEEEEEEEEccccccccccCCCCcEEEEEEcCcccCceeeeeeCCCCCCeeeeEEEEEeecCCCCeEEEEEEecCC
Q 011813 260 KKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEPESQILQLQVFDWDK 339 (477)
Q Consensus 260 ~~~~G~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~WnE~f~f~v~~~~~~~L~v~V~d~d~ 339 (477)
....|.|+|+|++|++|+++|..|.+||||++++++.. ++|+++++|+||.|||+|.|.+.......|+|+|||+|.
T Consensus 383 ~~~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~---~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~ 459 (510)
T 3jzy_A 383 TSGIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQS---YTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQ 459 (510)
T ss_dssp ---CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEE---EECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCS
T ss_pred CCCCceEEEEeceeecCCCCCCCCCCCeEEEEEECCee---ccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCC
Confidence 34679999999999999999999999999999997644 599999999999999999999987777889999999999
Q ss_pred CCCCCeeEEEEEECcccCCCCc----eEEEEecccccCCCCCCCCccceEEEEEEEEE
Q 011813 340 VGGHDRLGMQLVPLKLLTPHET----KEFTLDLLKHTNISDPKDMKQRGKIVVELTYV 393 (477)
Q Consensus 340 ~~~d~~lG~~~v~L~~l~~~~~----~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~y~ 393 (477)
+++|++||++.++|.++..+.. ...|+.+. +...|+|++.+++.
T Consensus 460 ~~~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~----------~~~~G~i~l~~~l~ 507 (510)
T 3jzy_A 460 FSPDDFLGRTEIPVAKIRTEQESKGPMTRRLLLH----------EVPTGEVWVRFDLQ 507 (510)
T ss_dssp SSSCCEEEEEEEEHHHHHHHHHHHCSCCEEEECB----------SSSSCEEEEEEEEE
T ss_pred CCCCCceEEEEEEHHHhccccCCCCceeeeecCC----------CCCCceEEEEEEEE
Confidence 9999999999999999876533 55677653 34679999888764
No 40
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.62 E-value=4.3e-15 Score=132.42 Aligned_cols=90 Identities=18% Similarity=0.276 Sum_probs=75.1
Q ss_pred cCCceEEEEEEEEccccccccccCCCCcEEEEEEcCcccCceeeeeeC-CCCCCeeeeEEEEEeecCCCCeEEEEEEecC
Q 011813 260 KKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKK-KNLNPEWNENFKLVVKEPESQILQLQVFDWD 338 (477)
Q Consensus 260 ~~~~G~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~-~t~nP~WnE~f~f~v~~~~~~~L~v~V~d~d 338 (477)
..+.+.|+|+|++|+++. ..|.+||||+++ . +. .+|++++ ++.||+|||+|.|.+.+. ...|.|+|||+|
T Consensus 10 ~g~~~~L~V~V~~A~~l~---~~g~~DPYV~v~-~-~~---~kt~~~~~~t~nP~WnE~f~f~v~~~-~~~L~~~V~D~d 80 (167)
T 2cjs_A 10 GGILSLLCVGVKKAKFDG---AQEKFNTYVTLK-V-QN---VESTTIAVRGSQPSWEQDFMFEINRL-DLGLTVEVWNKG 80 (167)
T ss_dssp CSCCCEEEEEEEEEECSS---CGGGCEEEEEEE-E-TT---EEEECCCEESSSCEEEEEEEEECCCT-TSEEEEEEEECC
T ss_pred CCceEEEEEEEEEEECCC---CCCCCCeEEEEE-e-cc---eEEEEecCCCCCCCCCCEEEEEeeCC-CCEEEEEEEECC
Confidence 345789999999999884 258899999999 2 22 3566654 699999999999999864 467999999999
Q ss_pred CCCCCCeeEEEEEECcccCCC
Q 011813 339 KVGGHDRLGMQLVPLKLLTPH 359 (477)
Q Consensus 339 ~~~~d~~lG~~~v~L~~l~~~ 359 (477)
+++|++||++.++|.++...
T Consensus 81 -~~~dd~iG~~~i~L~~l~~~ 100 (167)
T 2cjs_A 81 -LIWDTMVGTVWIPLRTIRQS 100 (167)
T ss_dssp -SSCCEEEEEEEEEGGGSCBC
T ss_pred -CCCCceEEEEEEEHHHhccc
Confidence 88999999999999998643
No 41
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.59 E-value=1.9e-15 Score=162.74 Aligned_cols=110 Identities=27% Similarity=0.451 Sum_probs=99.1
Q ss_pred cCCceEEEEEEEEcccccc---ccccCCCCcEEEEEEcCcccCceeeeeeCCCCCCeeeeEEEEEeecCCCCeEEEEEEe
Q 011813 260 KKPVGILHVKVVRASKLLK---KDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEPESQILQLQVFD 336 (477)
Q Consensus 260 ~~~~G~L~V~v~~A~~L~~---~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~WnE~f~f~v~~~~~~~L~v~V~d 336 (477)
..+.|.|+|+|++|++|+. +|..|.+||||++++++....+++|+++++|+||+|||+|.|.+.......|+|+|||
T Consensus 14 ~~~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D 93 (749)
T 1cjy_A 14 HQYSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMD 93 (749)
T ss_dssp CCCCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEE
T ss_pred CCCccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEE
Confidence 3568999999999999998 8888999999999999765566799999999999999999999987667899999999
Q ss_pred cCCCCCCCeeEEEEEECcccCCCCceEEEEeccc
Q 011813 337 WDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLK 370 (477)
Q Consensus 337 ~d~~~~d~~lG~~~v~L~~l~~~~~~~~~~~l~~ 370 (477)
+|.++ |++||++.++|.++..+.....|++|..
T Consensus 94 ~D~~~-ddfIG~v~I~L~~L~~g~~~~~w~~L~~ 126 (749)
T 1cjy_A 94 ANYVM-DETLGTATFTVSSMKVGEKKEVPFIFNQ 126 (749)
T ss_dssp CCSSS-CEEEEEECCBSTTSCTTCCCCEEEEETT
T ss_pred CCCCC-CceeEEEEEEHHHcCCCCceEEEEecCC
Confidence 99998 9999999999999988877788888743
No 42
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.55 E-value=2.4e-14 Score=138.87 Aligned_cols=110 Identities=35% Similarity=0.486 Sum_probs=90.4
Q ss_pred CCceEEEEEEEEccccccccccCCCCcEEEEEEcCc--ccCceeeeeeCCCCCCeeeeEEEEEeecCC--CCeEEEEEEe
Q 011813 261 KPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE--KLPWKKTTVKKKNLNPEWNENFKLVVKEPE--SQILQLQVFD 336 (477)
Q Consensus 261 ~~~G~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~--~~~~~kT~v~~~t~nP~WnE~f~f~v~~~~--~~~L~v~V~d 336 (477)
...|.|.|+|++|++|+.+|..|.+||||++++.+. ....++|+++++|.||+|||+|.|.+.... ...|.|+|||
T Consensus 147 p~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d 226 (284)
T 2r83_A 147 PTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLD 226 (284)
T ss_dssp TTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEEEE
T ss_pred CcCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEEEe
Confidence 346899999999999999998899999999999642 234578999999999999999999986432 4579999999
Q ss_pred cCCCCCCCeeEEEEEECcccC------------CCCceEEEEeccc
Q 011813 337 WDKVGGHDRLGMQLVPLKLLT------------PHETKEFTLDLLK 370 (477)
Q Consensus 337 ~d~~~~d~~lG~~~v~L~~l~------------~~~~~~~~~~l~~ 370 (477)
+|.+++|++||++.+++..+. ++.....|+.|..
T Consensus 227 ~d~~~~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~~~W~~L~~ 272 (284)
T 2r83_A 227 YDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQV 272 (284)
T ss_dssp CCSSSCCCEEEEEEEETTCCHHHHHHHHHHHHSTTSCEEEEEECBC
T ss_pred CCCCCCCcEEEEEEECCCCCCcHHHHHHHHHHCCCCchheeeecCC
Confidence 999999999999999998632 2344556666643
No 43
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.52 E-value=8.2e-14 Score=148.78 Aligned_cols=123 Identities=22% Similarity=0.378 Sum_probs=99.8
Q ss_pred CceEEEEEEEEccccccccc--cCCCCcEEEEEEcCc--ccCceeeeeeCCC-CCCeeeeEEEEEeecCCCCeEEEEEEe
Q 011813 262 PVGILHVKVVRASKLLKKDF--LGTSDPYVKLSLTGE--KLPWKKTTVKKKN-LNPEWNENFKLVVKEPESQILQLQVFD 336 (477)
Q Consensus 262 ~~G~L~V~v~~A~~L~~~d~--~g~~dpyv~v~l~~~--~~~~~kT~v~~~t-~nP~WnE~f~f~v~~~~~~~L~v~V~d 336 (477)
..+.|+|+|++|++|+..+. .+.+||||++.+.+. ...+++|++++++ .||+|||+|.|.+..+....|+|+|||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D 574 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVED 574 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEE
Confidence 57899999999999998873 689999999999653 2345699999987 999999999999986655789999999
Q ss_pred cCCCCCCCeeEEEEEECcccCCCCceEEEEecccccCCCCCCCC-ccceEEEEEEEEE
Q 011813 337 WDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNISDPKDM-KQRGKIVVELTYV 393 (477)
Q Consensus 337 ~d~~~~d~~lG~~~v~L~~l~~~~~~~~~~~l~~~~~~~~~~~~-~~~G~l~l~l~y~ 393 (477)
+|.+++|++||++.++|..+..+. .+++|... .+. -..|.|.+.++|.
T Consensus 575 ~D~~~~dd~iG~~~ipl~~L~~G~---r~v~L~d~------~g~~~~~~~L~v~i~~~ 623 (624)
T 1djx_A 575 YDSSSKNDFIGQSTIPWNSLKQGY---RHVHLLSK------NGDQHPSATLFVKISIQ 623 (624)
T ss_dssp CCSSSCCEEEEEEEEEGGGBCCEE---EEEEEECT------TSCEEEEEEEEEEEEEE
T ss_pred cCCCCCCceeEEEEEEHHHcCCCc---EEEeCCCC------CcCCCCceEEEEEEEEE
Confidence 999999999999999999998753 35665431 111 2467888888874
No 44
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.47 E-value=1.5e-14 Score=141.40 Aligned_cols=97 Identities=35% Similarity=0.539 Sum_probs=84.9
Q ss_pred CCceEEEEEEEEccccccccccCCCCcEEEEEEcC--cccCceeeeeeCCCCCCeeeeEEEEEeecCC--CCeEEEEEEe
Q 011813 261 KPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTG--EKLPWKKTTVKKKNLNPEWNENFKLVVKEPE--SQILQLQVFD 336 (477)
Q Consensus 261 ~~~G~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~--~~~~~~kT~v~~~t~nP~WnE~f~f~v~~~~--~~~L~v~V~d 336 (477)
...|.|+|+|++|++|+.+|..|.+||||++++.+ ....+++|+++++|.||+|||+|.|.+.... ...|.|+|||
T Consensus 149 ~~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d 228 (296)
T 1dqv_A 149 PTAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVD 228 (296)
T ss_dssp TTTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCEEEE
T ss_pred cccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHHccCcEEEEEEEe
Confidence 45699999999999999999899999999999973 3345679999999999999999999986432 4579999999
Q ss_pred cCCCCCCCeeEEEEEECcccC
Q 011813 337 WDKVGGHDRLGMQLVPLKLLT 357 (477)
Q Consensus 337 ~d~~~~d~~lG~~~v~L~~l~ 357 (477)
+|.+++|++||++.+++..+.
T Consensus 229 ~d~~~~~~~iG~~~i~l~~~~ 249 (296)
T 1dqv_A 229 YDCIGHNEVIGVCRVGPEAAD 249 (296)
T ss_dssp CCSSSCCEEEEECCCSSCTTC
T ss_pred CCCCCCCceEEEEEECCccCC
Confidence 999999999999999998764
No 45
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.44 E-value=8.1e-15 Score=152.55 Aligned_cols=127 Identities=20% Similarity=0.242 Sum_probs=21.9
Q ss_pred CCceEEEEEEEEccccccccccCCCCcEEEEEEcCcccCceeeeeeCCC---CCCeeeeEEEEEeecCCCCeEEEEEEec
Q 011813 261 KPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKN---LNPEWNENFKLVVKEPESQILQLQVFDW 337 (477)
Q Consensus 261 ~~~G~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t---~nP~WnE~f~f~v~~~~~~~L~v~V~d~ 337 (477)
...|.|+|+|++|++|+++| ||||++++++... .||+++++| .||+|||+|.|.+... ...|.++|||+
T Consensus 8 r~~~~L~V~VieAk~L~~~d-----dpYv~v~l~~~~~--~kT~v~~kt~~glnP~WnE~F~f~~~~~-~~~L~v~V~d~ 79 (483)
T 3bxj_A 8 RVDNVLKLWIIEARELPPKK-----RYYCELCLDDMLY--ARTTSKPRSASGDTVFWGEHFEFNNLPA-VRALRLHLYRD 79 (483)
T ss_dssp EEEECC----------------------------------------------------CCEECC----------------
T ss_pred eeccEEEEEEEEcCCcCCCC-----CCeEEEEECCeEE--eeeeEEeCCCCCCCCccccEEEEecCCC-ccEEEEEEEec
Confidence 34688999999999999876 9999999986533 589999999 9999999999986433 47899999994
Q ss_pred -C---CCCCCCeeEEEEEECcccCCCCceEEEEecccccCCC-----------------CCCCCccceEEEEEEEEEec
Q 011813 338 -D---KVGGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNIS-----------------DPKDMKQRGKIVVELTYVPF 395 (477)
Q Consensus 338 -d---~~~~d~~lG~~~v~L~~l~~~~~~~~~~~l~~~~~~~-----------------~~~~~~~~G~l~l~l~y~p~ 395 (477)
| ..++|++||++.+++.++..+...+.|++|....... ..++....|.|+++++|.+.
T Consensus 80 ~d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~lrL~v~~~~~ 158 (483)
T 3bxj_A 80 SDKKRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLKARYQTM 158 (483)
T ss_dssp ---------------------------CCEECC--------------------------------------CEEEEEEC
T ss_pred CCccccCCCCceEEEEEEEHHHhcCCCCCCeEEECCCCCCccccccccccccccccccccccCCCCCceEEEEEEeeee
Confidence 4 3678999999999999999877788888884322100 00112356999999999874
No 46
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.29 E-value=4.2e-12 Score=137.79 Aligned_cols=108 Identities=34% Similarity=0.506 Sum_probs=92.6
Q ss_pred CceEEEEEEEEccccccccccCCCCcEEEEEEcCc--ccCceeeeeeCCCCCCeeeeEEEEEeecCC-CCeEEEEEEecC
Q 011813 262 PVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE--KLPWKKTTVKKKNLNPEWNENFKLVVKEPE-SQILQLQVFDWD 338 (477)
Q Consensus 262 ~~G~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~--~~~~~kT~v~~~t~nP~WnE~f~f~v~~~~-~~~L~v~V~d~d 338 (477)
..+.|.|++++|++|.++|..|.+||||++++.+. ...+++|+++++|+||.|||+|.|.+.... ...|.++|||+|
T Consensus 170 ~~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d 249 (674)
T 3pfq_A 170 DREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWD 249 (674)
T ss_dssp CSSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECC
T ss_pred ccceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeecc
Confidence 35889999999999999999999999999999543 234579999999999999999999987433 457999999999
Q ss_pred CCCCCCeeEEEEEECcccCCCCceEEEEeccc
Q 011813 339 KVGGHDRLGMQLVPLKLLTPHETKEFTLDLLK 370 (477)
Q Consensus 339 ~~~~d~~lG~~~v~L~~l~~~~~~~~~~~l~~ 370 (477)
..++|++||++.+++.++.... ...|+++..
T Consensus 250 ~~~~dd~iG~~~i~l~~l~~~~-~~~w~~Lls 280 (674)
T 3pfq_A 250 LTSRNDFMGSLSFGISELQKAG-VDGWFKLLS 280 (674)
T ss_dssp SSSCCEECCBCCCBTTHHHHCC-EEEEEECBC
T ss_pred cccccccccccccchhhhccCC-cccceeecc
Confidence 9999999999999999987654 467777654
No 47
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.18 E-value=9.4e-11 Score=128.33 Aligned_cols=120 Identities=18% Similarity=0.282 Sum_probs=90.4
Q ss_pred ceEEEEEEEEccccccccccCCCCcEEEEEEcCc---ccCceeeeeeCC-CCCCeeee-EEEEE-eecCCCCeEEEEEEe
Q 011813 263 VGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE---KLPWKKTTVKKK-NLNPEWNE-NFKLV-VKEPESQILQLQVFD 336 (477)
Q Consensus 263 ~G~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~---~~~~~kT~v~~~-t~nP~WnE-~f~f~-v~~~~~~~L~v~V~d 336 (477)
...|+|+|++|++|+.. .+||||++.+.+. ...+++|+++++ +.||+||| +|.|. +..+....|+|+|||
T Consensus 724 ~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D 799 (885)
T 3ohm_B 724 ANALRVKVISGQFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFE 799 (885)
T ss_dssp CEEEEEEEEEEESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEE
T ss_pred ceEEEEEEEEeccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEc
Confidence 34799999999999853 6899999999752 122368998875 69999999 69998 765555689999999
Q ss_pred cCCCCCCCeeEEEEEECcccCCCCceEEEEecccccCCCCCCCCccceEEEEEEEEEecccC
Q 011813 337 WDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYVPFKED 398 (477)
Q Consensus 337 ~d~~~~d~~lG~~~v~L~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~y~p~~~~ 398 (477)
+| |++||++.+||..|..+.. .++|... ....-..|.|.+.+.+.....+
T Consensus 800 ~d----ddfiG~~~lpL~~L~~GyR---~vpL~~~-----~g~~l~~atLfv~i~~~~~~~~ 849 (885)
T 3ohm_B 800 EG----GKFVGHRILPVSAIRSGYH---YVCLRNE-----ANQPLCLPALLIYTEASDYIPD 849 (885)
T ss_dssp TT----TEEEEEEEEETTTCCCEEE---EEEEECT-----TSCEEEEEEEEEEEEEEECCCG
T ss_pred CC----ccEEeeEEEEHHHcCCCce---EEEecCC-----CCCccCceEEEEEEEEEecCCc
Confidence 87 7899999999999987632 2444321 0112257899999998865443
No 48
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.15 E-value=1.5e-10 Score=126.62 Aligned_cols=116 Identities=21% Similarity=0.298 Sum_probs=86.5
Q ss_pred CceEEEEEEEEccccccccccCCCCcEEEEEEcCc---ccCceeee-eeC-CCCCCeeee-EEEE-EeecCCCCeEEEEE
Q 011813 262 PVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE---KLPWKKTT-VKK-KNLNPEWNE-NFKL-VVKEPESQILQLQV 334 (477)
Q Consensus 262 ~~G~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~---~~~~~kT~-v~~-~t~nP~WnE-~f~f-~v~~~~~~~L~v~V 334 (477)
..|.|.|+|++|++|+. +.+||||++.+.+. ...+++|+ +++ ++.||+||| +|.| .+..+.-..|+|+|
T Consensus 676 ~~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V 751 (799)
T 2zkm_X 676 VATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAV 751 (799)
T ss_dssp TCEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEE
T ss_pred eeeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEE
Confidence 36799999999999985 46899999999542 22346898 776 569999999 6999 78665556899999
Q ss_pred EecCCCCCCCeeEEEEEECcccCCCCceEEEEecccccCCCCCCCCccceEEEEEEEEE
Q 011813 335 FDWDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYV 393 (477)
Q Consensus 335 ~d~d~~~~d~~lG~~~v~L~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~y~ 393 (477)
||+| |++||++.+||..+..+. .+++|... ....-..+.|.+.+.+.
T Consensus 752 ~D~d----~d~iG~~~ipl~~L~~G~---r~v~L~~~-----~g~~~~~~~Lfv~i~~~ 798 (799)
T 2zkm_X 752 MEEG----NKFLGHRIIPINALNSGY---HHLCLHSE-----SNMPLTMPALFIFLEMK 798 (799)
T ss_dssp EETT----TEEEEEEEEEGGGBCCEE---EEEEEECT-----TCCEEEEEEEEEEEEEE
T ss_pred EEeC----CCccceEeeehhhcCCCc---EEEeccCC-----CCCCCCceEEEEEEEEE
Confidence 9996 789999999999998653 34444321 00112347777777663
No 49
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.14 E-value=2.4e-10 Score=124.49 Aligned_cols=118 Identities=18% Similarity=0.318 Sum_probs=88.7
Q ss_pred ceEEEEEEEEccccccccccCCCCcEEEEEEcCccc----CceeeeeeCC-CCCCeeeeE-EEEE-eecCCCCeEEEEEE
Q 011813 263 VGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKL----PWKKTTVKKK-NLNPEWNEN-FKLV-VKEPESQILQLQVF 335 (477)
Q Consensus 263 ~G~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~~----~~~kT~v~~~-t~nP~WnE~-f~f~-v~~~~~~~L~v~V~ 335 (477)
.+.|+|+|++|++|+.+ .+||||++.+.+... .+++|+++++ +.||+|||+ |.|. +..++-..|+|+||
T Consensus 649 ~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~ 724 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVS 724 (816)
T ss_dssp CEEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEE
T ss_pred ceEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEE
Confidence 47899999999999853 589999999975321 3468998875 699999998 9998 76555568999999
Q ss_pred ecCCCCCCCeeEEEEEECcccCCCCceEEEEecccccCCCCCCCCccceEEEEEEEEEecc
Q 011813 336 DWDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYVPFK 396 (477)
Q Consensus 336 d~d~~~~d~~lG~~~v~L~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~y~p~~ 396 (477)
|++ |++||++.+||+.+..+.. .++|... ....-..+.|.+.+.+.-..
T Consensus 725 D~d----ddfiG~~~ipL~~L~~GyR---~vpL~~~-----~g~~~~~atLfv~i~~~~~~ 773 (816)
T 3qr0_A 725 EEN----GKFIGHRVMPLDGIKPGYR---HVPLRNE-----SNRPLGLASVFAHIVAKDYV 773 (816)
T ss_dssp ETT----SCEEEEEEEESTTCCCEEE---EEEEECT-----TSCEEEEEEEEEEEEEEECC
T ss_pred ecC----CCeeeEEEEEHHHcCCcce---EEEEeCC-----CCCCCCceEEEEEEEEEecC
Confidence 985 7899999999999987632 3444321 01122347888888876543
No 50
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.09 E-value=2e-10 Score=99.83 Aligned_cols=67 Identities=24% Similarity=0.203 Sum_probs=57.9
Q ss_pred CCccceEEEEEEEEEecccCcccccccccccccCCCCCCCCCCccccCcceEEEEEEeeeecCCCC----------CCCC
Q 011813 379 DMKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGE----------NHNN 448 (477)
Q Consensus 379 ~~~~~G~l~l~l~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~V~~A~~L~~~----------~~~D 448 (477)
.....|+|++++.|.| ..+.|.|+|++|+||+.. +.+|
T Consensus 8 ~~~~~G~l~~~l~y~~--------------------------------~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~d 55 (147)
T 2enp_A 8 SKYQLGMLHFSTQYDL--------------------------------LHNHLTVRVIEARDLPPPISHDGSRQDMAHSN 55 (147)
T ss_dssp SCCCCCEEEEEEEEET--------------------------------TTTEEEEEEEEEECCCCSCSSCCSSCTTCCCC
T ss_pred CCCcceEEEEEEEEcC--------------------------------CCCEEEEEEEEEeCCCCccccccccccCCCCC
Confidence 3567999999999987 578999999999999862 4799
Q ss_pred cEEEEEEcC---eEeeeeeeeeccCccceecC
Q 011813 449 PYAIILYKG---DKKRTKVSFLSLLYTYSLQL 477 (477)
Q Consensus 449 Pyvkv~l~~---~~~kTkv~~~t~~P~~~~~~ 477 (477)
|||++++.+ +++||+++++|+||.||+.|
T Consensus 56 pyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f 87 (147)
T 2enp_A 56 PYVKICLLPDQKNSKQTGVKRKTQKPVFEERY 87 (147)
T ss_dssp CEEEEEEETCCSSCEECCCCCSCSSCCCCBCC
T ss_pred cEEEEEEEeCCCcceEeecccCCCCCeEeeeE
Confidence 999999973 56699999999999999643
No 51
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.08 E-value=1.2e-10 Score=98.67 Aligned_cols=63 Identities=25% Similarity=0.375 Sum_probs=55.9
Q ss_pred cceEEEEEEEEEecccCcccccccccccccCCCCCCCCCCccccCcceEEEEEEeeeecCCC---CCCCCcEEEEEE---
Q 011813 382 QRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEG---ENHNNPYAIILY--- 455 (477)
Q Consensus 382 ~~G~l~l~l~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~V~~A~~L~~---~~~~DPyvkv~l--- 455 (477)
..|+|++++.|.+ ..+.|.|+|.+|+||+. .+.+||||++++
T Consensus 3 ~~G~l~~~l~y~~--------------------------------~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~ 50 (129)
T 2bwq_A 3 LSGQLSIKLWFDK--------------------------------VGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPD 50 (129)
T ss_dssp CCCEEEEEEEEET--------------------------------TTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESS
T ss_pred eeEEEEEEEEEcc--------------------------------CCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecC
Confidence 4799999999987 57899999999999986 467999999999
Q ss_pred --cCeEeeeeeeeeccCccceec
Q 011813 456 --KGDKKRTKVSFLSLLYTYSLQ 476 (477)
Q Consensus 456 --~~~~~kTkv~~~t~~P~~~~~ 476 (477)
+.+++||+++++|+||.||..
T Consensus 51 ~~~~~~~kT~v~~~t~nP~wne~ 73 (129)
T 2bwq_A 51 RSDKNKRRTKTVKKTLEPKWNQT 73 (129)
T ss_dssp CSGGGEEECCCCSSBSSCEEEEE
T ss_pred CCCCcceecccccCCCCCccccE
Confidence 456779999999999999954
No 52
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.07 E-value=1.7e-10 Score=99.56 Aligned_cols=65 Identities=17% Similarity=0.156 Sum_probs=56.8
Q ss_pred CccceEEEEEEEEEecccCcccccccccccccCCCCCCCCCCccccCcceEEEEEEeeeecCCC---CCCCCcEEEEEEc
Q 011813 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEG---ENHNNPYAIILYK 456 (477)
Q Consensus 380 ~~~~G~l~l~l~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~V~~A~~L~~---~~~~DPyvkv~l~ 456 (477)
....|+|++++.|.+ ..+.|.|+|++|+||+. .+.+||||+++++
T Consensus 12 ~~~~G~l~~~l~y~~--------------------------------~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~ 59 (142)
T 2chd_A 12 ATTLGALEFSLLYDQ--------------------------------DNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLL 59 (142)
T ss_dssp --CCCEEEEEEEEEG--------------------------------GGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEE
T ss_pred CCccceEEEEEEEeC--------------------------------CCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEE
Confidence 567899999999987 67899999999999986 4689999999997
Q ss_pred C-----eEeeeeeeeeccCccceec
Q 011813 457 G-----DKKRTKVSFLSLLYTYSLQ 476 (477)
Q Consensus 457 ~-----~~~kTkv~~~t~~P~~~~~ 476 (477)
+ .++||+++++|+||.||..
T Consensus 60 ~~~~~~~~~kT~v~~~t~nP~wne~ 84 (142)
T 2chd_A 60 PGASKSNKLRTKTLRNTRNPVWNET 84 (142)
T ss_dssp SCCSGGGEEECCCCCSCSSCEEEEE
T ss_pred cCCCCcceeeCCcCCCCCCCcCcCE
Confidence 6 6779999999999999954
No 53
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.07 E-value=1.2e-10 Score=102.38 Aligned_cols=65 Identities=11% Similarity=0.057 Sum_probs=56.1
Q ss_pred CccceEEEEEEEEEecccCcccccccccccccCCCCCCCCCCccccCcceEEEEEEeeeecCCC---CCCCCcEEEEEEc
Q 011813 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEG---ENHNNPYAIILYK 456 (477)
Q Consensus 380 ~~~~G~l~l~l~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~V~~A~~L~~---~~~~DPyvkv~l~ 456 (477)
....|+|++++.|.+ ..+.|.|.|++|+||+. ++.+||||++++.
T Consensus 26 ~~~~G~l~~sl~y~~--------------------------------~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~ 73 (155)
T 2z0u_A 26 AVGATRIQIALKYDE--------------------------------KNKQFAILIIQLSNLSALLQQQDQKVNIRVAVL 73 (155)
T ss_dssp --CCEEEEEEEEEET--------------------------------TTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEE
T ss_pred cCCcEEEEEEEEEcC--------------------------------CCCEEEEEEEEccCcCCcccCCCCCEEEEEEEe
Confidence 456899999999987 57899999999999986 5789999999997
Q ss_pred C---e---EeeeeeeeeccCccceec
Q 011813 457 G---D---KKRTKVSFLSLLYTYSLQ 476 (477)
Q Consensus 457 ~---~---~~kTkv~~~t~~P~~~~~ 476 (477)
+ . ++||+++++|+||.||..
T Consensus 74 ~~~~~~~~~~kT~v~~~tlnP~wnE~ 99 (155)
T 2z0u_A 74 PCSESTTCLFRTRPLDASDTLVFNEV 99 (155)
T ss_dssp SCSCHHHHEEECCCEECCSSEEEEEE
T ss_pred cCCCCCccceeCCcCCCCCCCccccE
Confidence 5 2 679999999999999953
No 54
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.06 E-value=1.9e-10 Score=101.38 Aligned_cols=66 Identities=29% Similarity=0.430 Sum_probs=57.2
Q ss_pred CCccceEEEEEEEEEecccCcccccccccccccCCCCCCCCCCccccCcceEEEEEEeeeecCCC---CCCCCcEEEEEE
Q 011813 379 DMKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEG---ENHNNPYAIILY 455 (477)
Q Consensus 379 ~~~~~G~l~l~l~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~V~~A~~L~~---~~~~DPyvkv~l 455 (477)
.....|+|+++++|.| ..+.|.|+|++|+||+. .+.+||||++++
T Consensus 7 ~~~~~G~l~~~l~y~~--------------------------------~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l 54 (159)
T 1tjx_A 7 ILEKLGDICFSLRYVP--------------------------------TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHL 54 (159)
T ss_dssp GGGCCCEEEEEEEEET--------------------------------TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEE
T ss_pred CcCcCCeEEEEEEEcC--------------------------------CCCEEEEEEEEeeCCCCccCCCCCCeEEEEEE
Confidence 3557899999999997 57899999999999986 468999999999
Q ss_pred cC-----eEeeeeeeeeccCccceec
Q 011813 456 KG-----DKKRTKVSFLSLLYTYSLQ 476 (477)
Q Consensus 456 ~~-----~~~kTkv~~~t~~P~~~~~ 476 (477)
++ +++||+++++|+||.||..
T Consensus 55 ~~~~~~~~~~kT~v~~~t~nP~wne~ 80 (159)
T 1tjx_A 55 MQNGKRLKKKKTTIKKNTLNPYYNES 80 (159)
T ss_dssp EETTEEEEEEECCCCCSCSSCEEEEE
T ss_pred EeCCceeceeeCceecCCCCCcccce
Confidence 63 3569999999999999954
No 55
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.06 E-value=1.1e-10 Score=100.64 Aligned_cols=66 Identities=24% Similarity=0.356 Sum_probs=57.6
Q ss_pred CccceEEEEEEEEEecccCcccccccccccccCCCCCCCCCCccccCcceEEEEEEeeeecCCC---CCCCCcEEEEEE-
Q 011813 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEG---ENHNNPYAIILY- 455 (477)
Q Consensus 380 ~~~~G~l~l~l~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~V~~A~~L~~---~~~~DPyvkv~l- 455 (477)
+...|+|++++.|.+ ..+.|.|+|++|+||+. .+.+||||++++
T Consensus 4 ~~~~G~i~~~l~y~~--------------------------------~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~ 51 (141)
T 1v27_A 4 GSSGGQLSIKLWFDK--------------------------------VGHQLIVTILGAKDLPSREDGRPRNPYVKIYFL 51 (141)
T ss_dssp CCCCCEEEEEEEEET--------------------------------TTTEEEEEEEEEESCCCCSSSCCCCEEEECCCS
T ss_pred CCcccEEEEEEEEeC--------------------------------CCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEe
Confidence 567899999999987 56899999999999986 467999999999
Q ss_pred ----cCeEeeeeeeeeccCccceecC
Q 011813 456 ----KGDKKRTKVSFLSLLYTYSLQL 477 (477)
Q Consensus 456 ----~~~~~kTkv~~~t~~P~~~~~~ 477 (477)
+.+++||+++++|+||.||..+
T Consensus 52 ~~~~~~~~~kT~~~~~t~nP~wne~f 77 (141)
T 1v27_A 52 PDRSDKNKRRTKTVKKTLEPKWNQTF 77 (141)
T ss_dssp SCCSSSSCCBCCCCSSCSSCCCCCCC
T ss_pred cCCCCCcceeCccccCCCCCccccEE
Confidence 3566799999999999999653
No 56
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.06 E-value=2.6e-10 Score=101.28 Aligned_cols=65 Identities=23% Similarity=0.371 Sum_probs=57.8
Q ss_pred CccceEEEEEEEEEecccCcccccccccccccCCCCCCCCCCccccCcceEEEEEEeeeecCCC---CCCCCcEEEEEEc
Q 011813 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEG---ENHNNPYAIILYK 456 (477)
Q Consensus 380 ~~~~G~l~l~l~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~V~~A~~L~~---~~~~DPyvkv~l~ 456 (477)
....|+|++++.|.+ ..+.|.|+|++|+||+. .+.+||||+++++
T Consensus 20 ~~~~G~l~~~l~y~~--------------------------------~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~ 67 (166)
T 2cm5_A 20 IEERGKILVSLMYST--------------------------------QQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLK 67 (166)
T ss_dssp CCCCCEEEEEEEEET--------------------------------TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEE
T ss_pred cCccceEEEEEEEEC--------------------------------CCCEEEEEEEEeECCCCccCCCCCCcEEEEEEE
Confidence 567899999999987 57899999999999986 4689999999998
Q ss_pred C-----eEeeeeeeeeccCccceec
Q 011813 457 G-----DKKRTKVSFLSLLYTYSLQ 476 (477)
Q Consensus 457 ~-----~~~kTkv~~~t~~P~~~~~ 476 (477)
+ .++||+++++|+||.||..
T Consensus 68 ~~~~~~~~~kT~v~~~t~nP~wne~ 92 (166)
T 2cm5_A 68 PDMGKKAKHKTQIKKKTLNPEFNEE 92 (166)
T ss_dssp TC---CCEEECCCCCSCSSCEEEEE
T ss_pred CCCCccceEeCCcccCCCCCcccce
Confidence 6 5669999999999999954
No 57
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.06 E-value=2.5e-10 Score=98.57 Aligned_cols=65 Identities=17% Similarity=0.268 Sum_probs=56.5
Q ss_pred CCccceEEEEEEEEEecccCcccccccccccccCCCCCCCCCCccccCcceEEEEEEeeeecCCC---CCCCCcEEEEEE
Q 011813 379 DMKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEG---ENHNNPYAIILY 455 (477)
Q Consensus 379 ~~~~~G~l~l~l~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~V~~A~~L~~---~~~~DPyvkv~l 455 (477)
.....|+|++++.|.+ ..+.|.|+|++|+||+. .+ +||||++++
T Consensus 6 ~~~~~G~l~~~l~y~~--------------------------------~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l 52 (142)
T 2dmg_A 6 SGSPLGQIQLTIRHSS--------------------------------QRNKLIVVVHACRNLIAFSEDG-SDPYVRMYL 52 (142)
T ss_dssp CSCSSCEEEEEEEEET--------------------------------TTTEEEEEEEEEECCCCSSTTC-CCEEEEEEE
T ss_pred CCCCcceEEEEEEEeC--------------------------------CCCEEEEEEEEeECCCCCCCCC-CCeeEEEEE
Confidence 3567899999999987 57899999999999986 45 999999999
Q ss_pred cC-----eEeeeeeeeeccCccceec
Q 011813 456 KG-----DKKRTKVSFLSLLYTYSLQ 476 (477)
Q Consensus 456 ~~-----~~~kTkv~~~t~~P~~~~~ 476 (477)
.+ .++||+++++|+||.||..
T Consensus 53 ~~~~~~~~~~kT~v~~~t~nP~wne~ 78 (142)
T 2dmg_A 53 LPDKRRSGRRKTHVSKKTLNPVFDQS 78 (142)
T ss_dssp ESCCCSSSCEECCCCCSCSSCEEEEE
T ss_pred EcCCCCCCcccCCccCCCCCCCcCce
Confidence 43 5669999999999999954
No 58
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.06 E-value=2.3e-10 Score=98.37 Aligned_cols=66 Identities=17% Similarity=0.179 Sum_probs=57.6
Q ss_pred CCccceEEEEEEEEEecccCcccccccccccccCCCCCCCCCCccccCcceEEEEEEeeeecCCC----CCCCCcEEEEE
Q 011813 379 DMKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEG----ENHNNPYAIIL 454 (477)
Q Consensus 379 ~~~~~G~l~l~l~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~V~~A~~L~~----~~~~DPyvkv~ 454 (477)
+....|+|++++.|.+ ..+.|.|+|++|+||+. .+.+||||+++
T Consensus 4 ~~~~~G~l~~~l~y~~--------------------------------~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~ 51 (138)
T 1ugk_A 4 GSSGLGTLFFSLEYNF--------------------------------ERKAFVVNIKEARGLPAMDEQSMTSDPYIKMT 51 (138)
T ss_dssp CCCCCCEEEEEEEEEG--------------------------------GGTEEEEEEEEEESCCCCBTTTTBCEEEEEEE
T ss_pred CCCccEEEEEEEEEEC--------------------------------CCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEE
Confidence 3567899999999987 57899999999999986 26799999999
Q ss_pred EcC---eEeeeeeeeeccCccceec
Q 011813 455 YKG---DKKRTKVSFLSLLYTYSLQ 476 (477)
Q Consensus 455 l~~---~~~kTkv~~~t~~P~~~~~ 476 (477)
+.+ +++||+++++|+||.||..
T Consensus 52 ~~~~~~~~~kT~v~~~t~nP~wne~ 76 (138)
T 1ugk_A 52 ILPEKKHKVKTRVLRKTLDPAFDET 76 (138)
T ss_dssp EETTTCSEEECCCCSSCSSCEEEEE
T ss_pred EecCCCceEecCcCcCCCCCcEeeE
Confidence 964 6779999999999999954
No 59
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=99.05 E-value=2.4e-09 Score=88.06 Aligned_cols=113 Identities=19% Similarity=0.318 Sum_probs=85.7
Q ss_pred ceEEEEEEEEccccccccccCCCCcEEEEEEcCcccC-ceee-eeeCCCCCCeeeeEEEEEeecCCCCeEEEEEEecCCC
Q 011813 263 VGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLP-WKKT-TVKKKNLNPEWNENFKLVVKEPESQILQLQVFDWDKV 340 (477)
Q Consensus 263 ~G~L~V~v~~A~~L~~~d~~g~~dpyv~v~l~~~~~~-~~kT-~v~~~t~nP~WnE~f~f~v~~~~~~~L~v~V~d~d~~ 340 (477)
.+.|+|.+.++.--+-.......||||.+.+...... ..+| ..++.|..|+|||+|.-.+.+ ...|.+.|++...
T Consensus 5 ~~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a~- 81 (126)
T 1yrk_A 5 APFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE--GRVIQIVLMRAAE- 81 (126)
T ss_dssp CCEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCT--TCEEEEEEEEETT-
T ss_pred CccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeC--CEEEEEEEEcCCC-
Confidence 4678888866653221122346899999999743321 2355 777899999999999999875 5789999997653
Q ss_pred CCCCeeEEEEEECcccC-----CCCceEEEEecccccCCCCCCCCccceEEEEEEEEE
Q 011813 341 GGHDRLGMQLVPLKLLT-----PHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYV 393 (477)
Q Consensus 341 ~~d~~lG~~~v~L~~l~-----~~~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~y~ 393 (477)
+++..|.+++.+|. .+...+.|++| ++.|+|++.+.|+
T Consensus 82 ---~fvAn~tV~~edL~~~c~~~~g~~e~WvdL------------eP~Gkl~~~i~~~ 124 (126)
T 1yrk_A 82 ---EPVSEVTVGVSVLAERCKKNNGKAEFWLDL------------QPQAKVLMSVQYF 124 (126)
T ss_dssp ---EEEEEEEEEHHHHHHHHHTTTTEEEEEEEC------------BSSCEEEEEEEEE
T ss_pred ---CeeeEEEEEHHHHHhhhccCCCceEEEEec------------ccCcEEEEEEEEe
Confidence 89999999999997 44566899987 3589999999997
No 60
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.05 E-value=2.6e-10 Score=98.36 Aligned_cols=65 Identities=20% Similarity=0.250 Sum_probs=56.7
Q ss_pred CccceEEEEEEEEEecccCcccccccccccccCCCCCCCCCCccccCcceEEEEEEeeeecCCC---CCCCCcEEEEEEc
Q 011813 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEG---ENHNNPYAIILYK 456 (477)
Q Consensus 380 ~~~~G~l~l~l~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~V~~A~~L~~---~~~~DPyvkv~l~ 456 (477)
....|+|++++.|.+ ..+.|.|+|++|+||+. .+.+||||++++.
T Consensus 9 ~~~~G~l~~~l~y~~--------------------------------~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~ 56 (141)
T 2d8k_A 9 RENLGRIQFSVGYNF--------------------------------QESTLTVKIMKAQELPAKDFSGTSDPFVKIYLL 56 (141)
T ss_dssp CCCCCEEEEEEEECS--------------------------------SSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEE
T ss_pred CceeeEEEEEEEEeC--------------------------------CCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEE
Confidence 456899999999987 57899999999999987 4679999999995
Q ss_pred ---CeEeeeeeeeeccCccceec
Q 011813 457 ---GDKKRTKVSFLSLLYTYSLQ 476 (477)
Q Consensus 457 ---~~~~kTkv~~~t~~P~~~~~ 476 (477)
.+++||+++++|+||.||+.
T Consensus 57 ~~~~~~~kT~v~~~t~nP~wne~ 79 (141)
T 2d8k_A 57 PDKKHKLETKVKRKNLNPHWNET 79 (141)
T ss_dssp SCCSSEEECCCCTTCSSCCCCEE
T ss_pred CCCCccEeCceEcCCCCCccccE
Confidence 35669999999999999964
No 61
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.02 E-value=2.9e-10 Score=97.42 Aligned_cols=62 Identities=23% Similarity=0.370 Sum_probs=55.0
Q ss_pred ceEEEEEEEEEecccCcccccccccccccCCCCCCCCCCccccCcceEEEEEEeeeecCCC---CCCCCcEEEEEEcC--
Q 011813 383 RGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEG---ENHNNPYAIILYKG-- 457 (477)
Q Consensus 383 ~G~l~l~l~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~V~~A~~L~~---~~~~DPyvkv~l~~-- 457 (477)
+|+|++++.|.+ ..+.|.|+|.+|+||+. .+.+||||++++.+
T Consensus 2 ~G~l~~sl~y~~--------------------------------~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~ 49 (138)
T 3n5a_A 2 RGELLLSLCYNP--------------------------------SANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKD 49 (138)
T ss_dssp CCEEEEEEEEET--------------------------------TTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETT
T ss_pred CcEEEEEEEEcC--------------------------------CCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCC
Confidence 699999999987 67899999999999987 46799999999974
Q ss_pred ---eEeeeeeeeeccCccceec
Q 011813 458 ---DKKRTKVSFLSLLYTYSLQ 476 (477)
Q Consensus 458 ---~~~kTkv~~~t~~P~~~~~ 476 (477)
.++||+++++|+||.||+.
T Consensus 50 ~~~~~~kT~~~~~t~nP~wne~ 71 (138)
T 3n5a_A 50 KRVEKKKTVTKKRNLNPIFNES 71 (138)
T ss_dssp EEEEEEECCCCSSCSSCEEEEE
T ss_pred CccceEeCccccCCCCCcCcce
Confidence 3569999999999999954
No 62
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.02 E-value=4.9e-10 Score=96.33 Aligned_cols=65 Identities=18% Similarity=0.028 Sum_probs=56.2
Q ss_pred CccceEEEEEEEEEecccCcccccccccccccCCCCCCCCCCccccCcceEEEEEEeeeecCCCCCCCCcEEEEEEc---
Q 011813 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGENHNNPYAIILYK--- 456 (477)
Q Consensus 380 ~~~~G~l~l~l~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~V~~A~~L~~~~~~DPyvkv~l~--- 456 (477)
....|+|++++.|.+ ..+.|.|+|++|++.+.++.+||||++++.
T Consensus 9 ~~~~G~l~~sl~y~~--------------------------------~~~~L~V~v~~a~~~d~~g~sDPyv~v~l~~~~ 56 (138)
T 1wfm_A 9 WNQAPKLHYCLDYDC--------------------------------QKAELFVTRLEAVTSNHDGGCDCYVQGSVANRT 56 (138)
T ss_dssp CSSCCEEEEEEEEET--------------------------------TTTEEEEEEEEEECCCCSSCCCEEEEEEEEETT
T ss_pred CCcceEEEEEEEEeC--------------------------------CCCEEEEEEEEEEcCCCCCCcceEEEEEEEcCC
Confidence 457899999999986 578999999999987778899999999994
Q ss_pred C-eEeeeeeeeeccCccceec
Q 011813 457 G-DKKRTKVSFLSLLYTYSLQ 476 (477)
Q Consensus 457 ~-~~~kTkv~~~t~~P~~~~~ 476 (477)
+ .++||+++++|+||.||+.
T Consensus 57 ~~~~~kT~v~~~tlnP~wnE~ 77 (138)
T 1wfm_A 57 GSVEAQTALKKRQLHTTWEEG 77 (138)
T ss_dssp EEEEEECCCCCCCSSEECSSC
T ss_pred CcccEecccCcCCCCCcCCce
Confidence 2 2459999999999999954
No 63
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.01 E-value=3.4e-10 Score=98.49 Aligned_cols=65 Identities=20% Similarity=0.265 Sum_probs=57.1
Q ss_pred CccceEEEEEEEEEecccCcccccccccccccCCCCCCCCCCccccCcceEEEEEEeeeecCCC----CCCCCcEEEEEE
Q 011813 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEG----ENHNNPYAIILY 455 (477)
Q Consensus 380 ~~~~G~l~l~l~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~V~~A~~L~~----~~~~DPyvkv~l 455 (477)
...+|+|++++.|.+ ..+.|.|+|++|+||+. .+.+||||++++
T Consensus 6 ~~~~G~l~~sl~y~~--------------------------------~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l 53 (148)
T 3fdw_A 6 IFVTGRIAFSLKYEQ--------------------------------QTQSLVVHVKECHQLAYADEAKKRSNPYVKTYL 53 (148)
T ss_dssp CCCCCEEEEEEEEET--------------------------------TTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEE
T ss_pred CccceEEEEEEEEeC--------------------------------CCCEEEEEEEEecCCCCcccCCCCCCeEEEEEE
Confidence 457899999999987 57899999999999985 467999999999
Q ss_pred c-----CeEeeeeeeeeccCccceec
Q 011813 456 K-----GDKKRTKVSFLSLLYTYSLQ 476 (477)
Q Consensus 456 ~-----~~~~kTkv~~~t~~P~~~~~ 476 (477)
. .+++||+++++|+||.||..
T Consensus 54 ~~~~~~~~~~kT~v~~~t~nP~wne~ 79 (148)
T 3fdw_A 54 LPDKSRQGKRKTSIKRDTVNPLYDET 79 (148)
T ss_dssp ETCCSGGGEEECCCCSSCSSCEEEEE
T ss_pred EcCCcccCccccccCCCCCCCcEeeE
Confidence 7 34679999999999999964
No 64
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.01 E-value=2.6e-10 Score=99.90 Aligned_cols=66 Identities=12% Similarity=0.069 Sum_probs=55.4
Q ss_pred CCccceEEEEEEEEEecccCcccccccccccccCCCCCCCCCCccccCcceEEEEEEeeeecCCC--CCCCCcEEEEEEc
Q 011813 379 DMKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEG--ENHNNPYAIILYK 456 (477)
Q Consensus 379 ~~~~~G~l~l~l~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~V~~A~~L~~--~~~~DPyvkv~l~ 456 (477)
.....|++.++++|.+ ..+.|.|+|.+|+||+. .+.+||||++++.
T Consensus 9 ~~~~~G~~~lsL~y~~--------------------------------~~~~L~V~v~~a~~L~~~d~g~~Dpyv~v~l~ 56 (153)
T 3fbk_A 9 SHKVQGAGQLRLSIDA--------------------------------QDRVLLLHIIEGKGLISKQPGTCDPYVKISLI 56 (153)
T ss_dssp ----CCCCEEEEEEEE--------------------------------SSSEEEEEEEEEESCCCCSSSCCCEEEEEEEE
T ss_pred ccCCCCEEEEEEEEEC--------------------------------CCCEEEEEEEEeeCCCCCCCCCCCEEEEEEEE
Confidence 3678899999999998 68999999999999987 4689999999993
Q ss_pred -----CeEeeeeeeeeccCccceec
Q 011813 457 -----GDKKRTKVSFLSLLYTYSLQ 476 (477)
Q Consensus 457 -----~~~~kTkv~~~t~~P~~~~~ 476 (477)
.+++||+++++|+||.||..
T Consensus 57 ~~~~~~~~~kT~v~~~t~nP~wne~ 81 (153)
T 3fbk_A 57 PEDSRLRHQKTQTVPDCRDPAFHEH 81 (153)
T ss_dssp SCSCCTTCEECCCCTTCSSCEEEEE
T ss_pred cCCCCccEEeccccCCCCCCccccE
Confidence 35569999999999999954
No 65
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.01 E-value=3.8e-10 Score=98.72 Aligned_cols=65 Identities=23% Similarity=0.241 Sum_probs=56.4
Q ss_pred CccceEEEEEEEEEecccCcccccccccccccCCCCCCCCCCccccCcceEEEEEEeeeecCCC---CCCCCcEEEEEEc
Q 011813 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEG---ENHNNPYAIILYK 456 (477)
Q Consensus 380 ~~~~G~l~l~l~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~V~~A~~L~~---~~~~DPyvkv~l~ 456 (477)
....|+|++++.|.+ ..+.|.|+|++|+||+. .+.+||||++++.
T Consensus 25 ~~~~G~l~~~l~y~~--------------------------------~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~ 72 (152)
T 1rsy_A 25 EEKLGKLQYSLDYDF--------------------------------QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLL 72 (152)
T ss_dssp -CCCCEEEEEEEEET--------------------------------TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEE
T ss_pred CCCceEEEEEEEEeC--------------------------------CCCEEEEEEEEeECCCCccCCCCcCeEEEEEEE
Confidence 456899999999987 57899999999999986 4689999999994
Q ss_pred ---CeEeeeeeeeeccCccceec
Q 011813 457 ---GDKKRTKVSFLSLLYTYSLQ 476 (477)
Q Consensus 457 ---~~~~kTkv~~~t~~P~~~~~ 476 (477)
.+++||+++++|+||.||..
T Consensus 73 ~~~~~~~kT~v~~~t~nP~wne~ 95 (152)
T 1rsy_A 73 PDKKKKFETKVHRKTLNPVFNEQ 95 (152)
T ss_dssp TTCCSCEECCCCTTCSSCEEEEE
T ss_pred cCCCceEeccccCCCCCCcCccc
Confidence 45669999999999999954
No 66
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.00 E-value=4.6e-10 Score=98.18 Aligned_cols=65 Identities=23% Similarity=0.310 Sum_probs=52.9
Q ss_pred CccceEEEEEEEEEecccCcccccccccccccCCCCCCCCCCccccCcceEEEEEEeeeecCCC---CCCCCcEEEEEEc
Q 011813 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEG---ENHNNPYAIILYK 456 (477)
Q Consensus 380 ~~~~G~l~l~l~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~V~~A~~L~~---~~~~DPyvkv~l~ 456 (477)
....|+|++++.|.| ..+.|.|+|++|+||+. .+.+||||++++.
T Consensus 13 ~~~~G~l~~~l~y~~--------------------------------~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~ 60 (153)
T 1w15_A 13 PSGRGELLVSLCYQS--------------------------------TTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLY 60 (153)
T ss_dssp ---CCEEEEEEEEET--------------------------------TTTEEEEEEEEEESCC------CCCEEEEEEEE
T ss_pred CccccEEEEEEEEcC--------------------------------CCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEE
Confidence 457899999999997 57899999999999986 4679999999994
Q ss_pred --Ce---EeeeeeeeeccCccceec
Q 011813 457 --GD---KKRTKVSFLSLLYTYSLQ 476 (477)
Q Consensus 457 --~~---~~kTkv~~~t~~P~~~~~ 476 (477)
++ ++||+++++|+||.||+.
T Consensus 61 ~~~~~~~~~kT~v~~~t~nP~wne~ 85 (153)
T 1w15_A 61 HAKKRISKKKTHVKKCTPNAVFNEL 85 (153)
T ss_dssp ETTEEEEEEECCCCCSCSSEEEEEE
T ss_pred eCCeEeceEecCcccCCCCCeecce
Confidence 33 559999999999999954
No 67
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=98.99 E-value=5.3e-10 Score=96.62 Aligned_cols=65 Identities=25% Similarity=0.287 Sum_probs=57.0
Q ss_pred CccceEEEEEEEEEecccCcccccccccccccCCCCCCCCCCccccCcceEEEEEEeeeecCCC---CCCCCcEEEEEE-
Q 011813 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEG---ENHNNPYAIILY- 455 (477)
Q Consensus 380 ~~~~G~l~l~l~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~V~~A~~L~~---~~~~DPyvkv~l- 455 (477)
....|+|++++.|.+ ..+.|.|+|++|+||+. .+.+||||++++
T Consensus 17 ~~~~G~l~~~l~y~~--------------------------------~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~ 64 (143)
T 3f04_A 17 VEKLGKLQYSLDYDF--------------------------------QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLL 64 (143)
T ss_dssp CCCCCEEEEEEEEET--------------------------------TTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEE
T ss_pred ccCeEEEEEEEEEeC--------------------------------CCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEE
Confidence 456899999999987 67899999999999987 468999999999
Q ss_pred --cCeEeeeeeeeeccCccceec
Q 011813 456 --KGDKKRTKVSFLSLLYTYSLQ 476 (477)
Q Consensus 456 --~~~~~kTkv~~~t~~P~~~~~ 476 (477)
+.+++||+++++|+||.||..
T Consensus 65 ~~~~~~~kT~v~~~t~nP~wne~ 87 (143)
T 3f04_A 65 PDKKKKFETKVHRKTLNPVFNEQ 87 (143)
T ss_dssp SCCSCCEECCCCCSCSSCEEEEE
T ss_pred CCCCccEECccCcCCCCCcCcCe
Confidence 445679999999999999954
No 68
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.97 E-value=3e-09 Score=88.55 Aligned_cols=115 Identities=17% Similarity=0.245 Sum_probs=87.7
Q ss_pred CceEEEEEEEEcccccccc-ccCCCCcEEEEEEcCccc-Cceee-eeeCCCCCCeeeeEEEEEeecCCCCeEEEEEEecC
Q 011813 262 PVGILHVKVVRASKLLKKD-FLGTSDPYVKLSLTGEKL-PWKKT-TVKKKNLNPEWNENFKLVVKEPESQILQLQVFDWD 338 (477)
Q Consensus 262 ~~G~L~V~v~~A~~L~~~d-~~g~~dpyv~v~l~~~~~-~~~kT-~v~~~t~nP~WnE~f~f~v~~~~~~~L~v~V~d~d 338 (477)
..+.|+|.+.++.--+-.. .....||||.+.+..... ...+| ..++.|..|+|||+|.-.+.+ ...|.|.|++..
T Consensus 8 m~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a 85 (138)
T 2enj_A 8 MSPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINK--GRVMQIIVKGKN 85 (138)
T ss_dssp CCCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCS--SCEEEEEEECSS
T ss_pred cCcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEEC--CeEEEEEEEcCC
Confidence 3567888887766433221 123589999999975422 23567 777889999999999988875 578999999654
Q ss_pred CCCCCCeeEEEEEECcccC-----CCCceEEEEecccccCCCCCCCCccceEEEEEEEEEe
Q 011813 339 KVGGHDRLGMQLVPLKLLT-----PHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYVP 394 (477)
Q Consensus 339 ~~~~d~~lG~~~v~L~~l~-----~~~~~~~~~~l~~~~~~~~~~~~~~~G~l~l~l~y~p 394 (477)
. +++..|.+++.+|. .+...+.|++| ++.|+|++.+.|+-
T Consensus 86 ~----~fVAn~tV~~edL~~~ck~~~g~~e~WvdL------------eP~Gkl~v~i~~~~ 130 (138)
T 2enj_A 86 V----DLISETTVELYSLAERCRKNNGKTEIWLEL------------KPQGRMLMNARYFL 130 (138)
T ss_dssp C----SCCEEEEEESHHHHHHHHHTTTCEEEEEEC------------BSSCEEEEEEEECC
T ss_pred C----CeeeEEEEEHHHHHhhhccCCCceEEEEec------------ccCcEEEEEEEEEE
Confidence 3 89999999999998 45567899987 35899999999973
No 69
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=98.90 E-value=2.2e-09 Score=91.75 Aligned_cols=61 Identities=21% Similarity=0.302 Sum_probs=53.5
Q ss_pred cceEEEEEEEEEecccCcccccccccccccCCCCCCCCCCccccCcceEEEEEEeeeecCCC---CCCCCcEEEEEE---
Q 011813 382 QRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEG---ENHNNPYAIILY--- 455 (477)
Q Consensus 382 ~~G~l~l~l~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~V~~A~~L~~---~~~~DPyvkv~l--- 455 (477)
.+|+|++++.| . .+.|.|+|++|+||+. .+.+||||++++
T Consensus 3 ~~G~l~~~l~~-~---------------------------------~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~ 48 (137)
T 3rdl_A 3 KRGRIYLKAEV-T---------------------------------DEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPD 48 (137)
T ss_dssp CCCEEEEEEEE-E---------------------------------TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECC
T ss_pred cceEEEEEEEE-c---------------------------------CCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcC
Confidence 57999999999 2 4799999999999986 468999999999
Q ss_pred --cCeEeeeeeeeeccCccceec
Q 011813 456 --KGDKKRTKVSFLSLLYTYSLQ 476 (477)
Q Consensus 456 --~~~~~kTkv~~~t~~P~~~~~ 476 (477)
+.+++||+++++|+||.||..
T Consensus 49 ~~~~~~~kT~~~~~t~nP~wne~ 71 (137)
T 3rdl_A 49 PKNESKQKTKTIRSTLNPQWNES 71 (137)
T ss_dssp TTCCCCEECCCCCSCSSCEEEEE
T ss_pred CCCCeeecCceEcCCCCCCcccE
Confidence 456779999999999999953
No 70
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=98.87 E-value=8.7e-10 Score=95.09 Aligned_cols=63 Identities=21% Similarity=0.281 Sum_probs=54.5
Q ss_pred CccceEEEEEEEEEecccCcccccccccccccCCCCCCCCCCccccCcceEEEEEEeeeecCCC---CCCCCcEEEEEEc
Q 011813 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEG---ENHNNPYAIILYK 456 (477)
Q Consensus 380 ~~~~G~l~l~l~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~V~~A~~L~~---~~~~DPyvkv~l~ 456 (477)
....|+|++++.|. .|.|.|+|++|+||+. .+.+||||+++++
T Consensus 3 ~~~~G~i~~~l~y~----------------------------------~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~ 48 (142)
T 1rh8_A 3 HPITGEIQLQINYD----------------------------------LGNLIIHILQARNLVPRDNNGYSDPFVKVYLL 48 (142)
T ss_dssp CCCCCEEEEEEEEE----------------------------------TTEEEEEEEEEESCCCCSSSSCSCCEEEEEET
T ss_pred CCcceEEEEEEEEc----------------------------------CCEEEEEEEEecCCCCCCCCCCCCceEEEEEe
Confidence 45689999999995 3689999999999986 4689999999998
Q ss_pred Ce--------------EeeeeeeeeccCccceec
Q 011813 457 GD--------------KKRTKVSFLSLLYTYSLQ 476 (477)
Q Consensus 457 ~~--------------~~kTkv~~~t~~P~~~~~ 476 (477)
+. +.||+++++|+||.||..
T Consensus 49 ~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~ 82 (142)
T 1rh8_A 49 PGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQT 82 (142)
T ss_dssp TSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEE
T ss_pred cCCCcccccccccccceeeccccCCCCCCCCCCE
Confidence 63 459999999999999964
No 71
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=98.84 E-value=4e-09 Score=91.74 Aligned_cols=63 Identities=24% Similarity=0.333 Sum_probs=53.4
Q ss_pred CccceEEEEEEEEEecccCcccccccccccccCCCCCCCCCCccccCcceEEEEEEeeeecCCC---CCCCCcEEEEEEc
Q 011813 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEG---ENHNNPYAIILYK 456 (477)
Q Consensus 380 ~~~~G~l~l~l~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~V~~A~~L~~---~~~~DPyvkv~l~ 456 (477)
....|+|++.+.|. .+.|.|+|++|+||+. .+.+||||++++.
T Consensus 16 ~~~~G~l~~~l~~~----------------------------------~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~ 61 (149)
T 1a25_A 16 MERRGRIYIQAHID----------------------------------REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLI 61 (149)
T ss_dssp -CTTCEEEEEEEES----------------------------------SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEE
T ss_pred CCcceEEEEEEEec----------------------------------CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEE
Confidence 44679999999873 3579999999999986 4679999999997
Q ss_pred C-----eEeeeeeeeeccCccceec
Q 011813 457 G-----DKKRTKVSFLSLLYTYSLQ 476 (477)
Q Consensus 457 ~-----~~~kTkv~~~t~~P~~~~~ 476 (477)
+ .++||+++++|+||.||..
T Consensus 62 ~~~~~~~~~kT~v~~~t~nP~wne~ 86 (149)
T 1a25_A 62 PDPKSESKQKTKTIKCSLNPEWNET 86 (149)
T ss_dssp SCTTCSSCEECCCCSSCSSCEEEEE
T ss_pred CCCCCcceEecceeCCCCCCcCCcE
Confidence 3 5669999999999999954
No 72
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=98.78 E-value=6.4e-09 Score=92.77 Aligned_cols=63 Identities=22% Similarity=0.281 Sum_probs=52.5
Q ss_pred CccceEEEEEEEEEecccCcccccccccccccCCCCCCCCCCccccCcceEEEEEEeeeecCCC----CCCCCcEEEEEE
Q 011813 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEG----ENHNNPYAIILY 455 (477)
Q Consensus 380 ~~~~G~l~l~l~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~V~~A~~L~~----~~~~DPyvkv~l 455 (477)
....|+|++.+.| . .+.|.|+|++|+||+. .+.+||||++++
T Consensus 15 ~~~~G~l~~~l~y-~---------------------------------~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l 60 (171)
T 2q3x_A 15 TPAMGDIQIGMED-K---------------------------------KGQLEVEVIRARSLTQKPGSKSTPAPYVKVYL 60 (171)
T ss_dssp --CCCEEEEEEEE-E---------------------------------TTEEEEEEEEEESCCCCC---CCCEEEEEEEE
T ss_pred CCCccEEEEEEEE-C---------------------------------CCEEEEEEEEeeCCCCCCcCCCCCCceEEEEE
Confidence 4567999999999 2 4689999999999985 368999999998
Q ss_pred cC-----eEeeeeeeeeccCccceec
Q 011813 456 KG-----DKKRTKVSFLSLLYTYSLQ 476 (477)
Q Consensus 456 ~~-----~~~kTkv~~~t~~P~~~~~ 476 (477)
.+ +++||+++++|+||.||+.
T Consensus 61 ~~~~~~~~~~kT~v~~~t~nP~wne~ 86 (171)
T 2q3x_A 61 LENGACIAKKKTRIARKTLDPLYQQS 86 (171)
T ss_dssp EETTEEEEEEECCCCCSCSSCEEEEE
T ss_pred ECCCccccceeCccCCCCCCCCCCcE
Confidence 64 2669999999999999964
No 73
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=98.76 E-value=7e-09 Score=88.31 Aligned_cols=50 Identities=20% Similarity=0.361 Sum_probs=46.4
Q ss_pred cceEEEEEEeeeecCCC---CCCCCcEEEEEEcCeEeeeeeeeeccCccceec
Q 011813 427 GAGLLSVLVQGAEDVEG---ENHNNPYAIILYKGDKKRTKVSFLSLLYTYSLQ 476 (477)
Q Consensus 427 ~~g~L~V~V~~A~~L~~---~~~~DPyvkv~l~~~~~kTkv~~~t~~P~~~~~ 476 (477)
..|.|.|+|++|+||+. .+.+||||++++++++.||+++++|+||.||..
T Consensus 11 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~ 63 (133)
T 2ep6_A 11 DVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKV 63 (133)
T ss_dssp CSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEE
T ss_pred CceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEEEEeeeecCCCCCccccE
Confidence 78999999999999986 468999999999999999999999999999964
No 74
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=98.76 E-value=9.4e-09 Score=90.09 Aligned_cols=52 Identities=17% Similarity=0.155 Sum_probs=45.5
Q ss_pred CcceEEEEEEeeeecCCCC-------------CCCCcEEEEEEcCeEe-eeeeeeeccCccceecC
Q 011813 426 SGAGLLSVLVQGAEDVEGE-------------NHNNPYAIILYKGDKK-RTKVSFLSLLYTYSLQL 477 (477)
Q Consensus 426 ~~~g~L~V~V~~A~~L~~~-------------~~~DPyvkv~l~~~~~-kTkv~~~t~~P~~~~~~ 477 (477)
...|.|+|+|.+|+||+.. +.+||||++.+++++. ||+++++|+||.||+.|
T Consensus 26 ~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F 91 (157)
T 2fk9_A 26 KFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEF 91 (157)
T ss_dssp CEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEE
T ss_pred cCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEE
Confidence 3689999999999999852 4699999999998774 99999999999999653
No 75
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=98.73 E-value=1.1e-08 Score=87.37 Aligned_cols=50 Identities=26% Similarity=0.307 Sum_probs=43.8
Q ss_pred cceEEEEEEeeeecCCC--CCCCCcEEEEEE-----cCeEeeeeeeeeccCccceec
Q 011813 427 GAGLLSVLVQGAEDVEG--ENHNNPYAIILY-----KGDKKRTKVSFLSLLYTYSLQ 476 (477)
Q Consensus 427 ~~g~L~V~V~~A~~L~~--~~~~DPyvkv~l-----~~~~~kTkv~~~t~~P~~~~~ 476 (477)
..+.|.|+|.+|+||+. ++.+||||++++ +..++||+++++|+||.||+.
T Consensus 18 ~~~~L~V~V~~a~~L~~~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~ 74 (134)
T 2b3r_A 18 RNGTLFIMVMHIKDLVTEDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEM 74 (134)
T ss_dssp ETTEEEEEEEEEECCCCTTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEE
T ss_pred cCCEEEEEEEEeeCCCCCCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccE
Confidence 46899999999999986 468999999999 446679999999999999954
No 76
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=98.70 E-value=1.3e-08 Score=88.30 Aligned_cols=50 Identities=22% Similarity=0.291 Sum_probs=46.3
Q ss_pred cceEEEEEEeeeecCCC---CCCCCcEEEEEEcCeEeeeeeeeeccCccceec
Q 011813 427 GAGLLSVLVQGAEDVEG---ENHNNPYAIILYKGDKKRTKVSFLSLLYTYSLQ 476 (477)
Q Consensus 427 ~~g~L~V~V~~A~~L~~---~~~~DPyvkv~l~~~~~kTkv~~~t~~P~~~~~ 476 (477)
..|.|.|+|++|+||+. .+.+||||++++++++.||+++++|+||.||..
T Consensus 15 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~ 67 (148)
T 3kwu_A 15 WSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEEN 67 (148)
T ss_dssp CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCCSCSSCEEEEE
T ss_pred cccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEEEECCccCCCCCCCcccE
Confidence 67999999999999987 468999999999999999999999999999954
No 77
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=98.70 E-value=8.2e-09 Score=86.90 Aligned_cols=50 Identities=18% Similarity=0.226 Sum_probs=44.6
Q ss_pred cceEEEEEEeeeecCCC------CCCCCcEEEEEEcC---eEeeeeeeeeccCccceec
Q 011813 427 GAGLLSVLVQGAEDVEG------ENHNNPYAIILYKG---DKKRTKVSFLSLLYTYSLQ 476 (477)
Q Consensus 427 ~~g~L~V~V~~A~~L~~------~~~~DPyvkv~l~~---~~~kTkv~~~t~~P~~~~~ 476 (477)
++|.|.|+|++|+||+. .+.+||||++++++ +++||+++++|+||.||..
T Consensus 1 S~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~ 59 (126)
T 1rlw_A 1 SSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNET 59 (126)
T ss_dssp CCEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEE
T ss_pred CCcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccce
Confidence 36899999999999996 27899999999986 6779999999999999954
No 78
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.69 E-value=1.2e-08 Score=87.51 Aligned_cols=50 Identities=24% Similarity=0.402 Sum_probs=46.1
Q ss_pred cceEEEEEEeeeecCCCC--CCCCcEEEEEEcCeEeeeeeeeeccCccceec
Q 011813 427 GAGLLSVLVQGAEDVEGE--NHNNPYAIILYKGDKKRTKVSFLSLLYTYSLQ 476 (477)
Q Consensus 427 ~~g~L~V~V~~A~~L~~~--~~~DPyvkv~l~~~~~kTkv~~~t~~P~~~~~ 476 (477)
..|.|.|+|++|+||+.. +.+||||+++++++++||+++++|+||.||..
T Consensus 5 ~~g~L~v~v~~a~~L~~~~~g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~ 56 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKTKFGKPDPIVSVIFKDEKKKTKKVDNELNPVWNEI 56 (140)
T ss_dssp BCCEEEEEEEEEESCCCCSSSCCCEEEEEECSSCEEECCCCCSCSSCEEEEE
T ss_pred CCcEEEEEEEEeeCCCCCCCCCCCeEEEEEECCEeEEeeeecCCCCCccCcE
Confidence 678999999999999863 58999999999999999999999999999965
No 79
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=98.62 E-value=2.4e-08 Score=85.29 Aligned_cols=50 Identities=18% Similarity=0.326 Sum_probs=46.0
Q ss_pred cceEEEEEEeeeecCCC---CCCCCcEEEEEEcCeEeeeeeee-eccCccceec
Q 011813 427 GAGLLSVLVQGAEDVEG---ENHNNPYAIILYKGDKKRTKVSF-LSLLYTYSLQ 476 (477)
Q Consensus 427 ~~g~L~V~V~~A~~L~~---~~~~DPyvkv~l~~~~~kTkv~~-~t~~P~~~~~ 476 (477)
..|.|.|+|++|+||+. .+.+||||++++++++.||++++ +|+||.||..
T Consensus 8 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~ 61 (136)
T 1wfj_A 8 PHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNET 61 (136)
T ss_dssp CEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEE
T ss_pred CcEEEEEEEEeccCCCCcccCCCcCceEEEEECCccceeEeccCCCCCCccCcE
Confidence 68999999999999987 36899999999999999999999 9999999964
No 80
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=98.59 E-value=4.7e-08 Score=82.98 Aligned_cols=50 Identities=16% Similarity=0.119 Sum_probs=44.0
Q ss_pred cceEEEEEEeeeecCCC---CCCCCcEEEEEEcC--eEeeeeeeeeccCccceec
Q 011813 427 GAGLLSVLVQGAEDVEG---ENHNNPYAIILYKG--DKKRTKVSFLSLLYTYSLQ 476 (477)
Q Consensus 427 ~~g~L~V~V~~A~~L~~---~~~~DPyvkv~l~~--~~~kTkv~~~t~~P~~~~~ 476 (477)
....|+|+|++|+||+. .+.+||||++++++ ++.||+++++|+||.||..
T Consensus 3 ~~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~ 57 (132)
T 3pyc_A 3 EFIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQH 57 (132)
T ss_dssp SEEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEE
T ss_pred CeEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCE
Confidence 45789999999999986 46899999999975 6779999999999999964
No 81
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=98.56 E-value=3.8e-08 Score=84.14 Aligned_cols=50 Identities=14% Similarity=0.105 Sum_probs=43.5
Q ss_pred cceEEEEEEeeeecCCCC---C-----------CCCcEEEEEEcCeEe-eeeeeeeccCccceec
Q 011813 427 GAGLLSVLVQGAEDVEGE---N-----------HNNPYAIILYKGDKK-RTKVSFLSLLYTYSLQ 476 (477)
Q Consensus 427 ~~g~L~V~V~~A~~L~~~---~-----------~~DPyvkv~l~~~~~-kTkv~~~t~~P~~~~~ 476 (477)
..|.|+|+|++|+||+.. + .+||||++++++++. ||+++++|+||.||+.
T Consensus 4 ~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~ 68 (136)
T 1gmi_A 4 FNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDE 68 (136)
T ss_dssp EEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEE
T ss_pred cceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCE
Confidence 579999999999999852 2 399999999988764 9999999999999964
No 82
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=98.56 E-value=5.2e-08 Score=86.96 Aligned_cols=50 Identities=18% Similarity=0.104 Sum_probs=45.0
Q ss_pred cceEEEEEEeeeecCCC---CCCCCcEEEEEEcCeEeeeeeeeeccCccceec
Q 011813 427 GAGLLSVLVQGAEDVEG---ENHNNPYAIILYKGDKKRTKVSFLSLLYTYSLQ 476 (477)
Q Consensus 427 ~~g~L~V~V~~A~~L~~---~~~~DPyvkv~l~~~~~kTkv~~~t~~P~~~~~ 476 (477)
..+.|.|+|.+|++|+. .+.+||||+++++++++||+++++|+||.||..
T Consensus 34 ~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~ 86 (173)
T 2nq3_A 34 MKSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQP 86 (173)
T ss_dssp CCEEEEEEEEEEEECCCC--CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEE
T ss_pred CceEEEEEEEEeECCCCcccCCCCCeEEEEEECCEEeEccccCCCCCCeECCE
Confidence 67899999999999983 245999999999998889999999999999964
No 83
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=98.52 E-value=6.7e-08 Score=84.23 Aligned_cols=51 Identities=16% Similarity=0.147 Sum_probs=42.2
Q ss_pred CcceEEEEEEeeeecCCC---CCCCCcEEEEEEcC------eEeeeeeeeeccCccceec
Q 011813 426 SGAGLLSVLVQGAEDVEG---ENHNNPYAIILYKG------DKKRTKVSFLSLLYTYSLQ 476 (477)
Q Consensus 426 ~~~g~L~V~V~~A~~L~~---~~~~DPyvkv~l~~------~~~kTkv~~~t~~P~~~~~ 476 (477)
...+.|+|+|++|+||+. .+.+||||++++++ +++||+++++|+||.||..
T Consensus 17 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~ 76 (153)
T 3b7y_A 17 ENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEE 76 (153)
T ss_dssp TTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEE
T ss_pred CCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCE
Confidence 378999999999999986 46899999999974 4669999999999999964
No 84
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=98.41 E-value=1.9e-07 Score=79.32 Aligned_cols=48 Identities=15% Similarity=0.073 Sum_probs=39.7
Q ss_pred cceEEEEEEeeeecCCCCCCCCcEEEEEEcCeEeeeeeee-eccCccceec
Q 011813 427 GAGLLSVLVQGAEDVEGENHNNPYAIILYKGDKKRTKVSF-LSLLYTYSLQ 476 (477)
Q Consensus 427 ~~g~L~V~V~~A~~L~~~~~~DPyvkv~l~~~~~kTkv~~-~t~~P~~~~~ 476 (477)
+.+.|.|+|++|++|+.++.+||||++. + ++.||++++ +|+||.||+.
T Consensus 3 ~~~~L~V~V~~A~~l~~~g~~DPYv~v~-~-~~~kt~~~~~~t~nP~WnE~ 51 (131)
T 2cjt_A 3 VMSLLCVGVKKAKFDGAQEKFNTYVTLK-V-QNVKSTTIAVRGSQPSWEQD 51 (131)
T ss_dssp CCEEEEEEEEEEECSSCGGGCEEEEEEE-E-TTEEEECCCEESSSCEEEEE
T ss_pred cceEEEEEEEEeECCCCCCCcCeEEEEE-e-cCEEEeEecCCCCCceECCE
Confidence 5689999999999998778899999999 3 344666554 7999999965
No 85
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=98.32 E-value=4.7e-07 Score=94.63 Aligned_cols=50 Identities=22% Similarity=0.258 Sum_probs=46.2
Q ss_pred cceEEEEEEeeeecCCC--CCCCCcEEEEEEcCeEeeeeeeeeccCccceec
Q 011813 427 GAGLLSVLVQGAEDVEG--ENHNNPYAIILYKGDKKRTKVSFLSLLYTYSLQ 476 (477)
Q Consensus 427 ~~g~L~V~V~~A~~L~~--~~~~DPyvkv~l~~~~~kTkv~~~t~~P~~~~~ 476 (477)
..|.|+|.|++|+||++ .+.+||||+|++++++.||+++++|+||.||.+
T Consensus 392 ~~~~L~V~V~~A~~L~~D~~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~ 443 (540)
T 3nsj_A 392 GLAHLVVSNFRAEHLWGDYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDK 443 (540)
T ss_dssp TEEEEEEEEEEEESCCCSSCSCCCEEEEEEETTEEEECCCBCSCSSCBCCCC
T ss_pred cccEEEEEEEEccCCCcccCCCcCeEEEEEECCEeeeeeeecCCCCCCCCeE
Confidence 57999999999999987 468999999999999999999999999999965
No 86
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=98.27 E-value=3.6e-07 Score=80.93 Aligned_cols=48 Identities=15% Similarity=0.034 Sum_probs=40.1
Q ss_pred cceEEEEEEeeeecCCCCCCCCcEEEEEEcCeEeeeeeee-eccCccceec
Q 011813 427 GAGLLSVLVQGAEDVEGENHNNPYAIILYKGDKKRTKVSF-LSLLYTYSLQ 476 (477)
Q Consensus 427 ~~g~L~V~V~~A~~L~~~~~~DPyvkv~l~~~~~kTkv~~-~t~~P~~~~~ 476 (477)
..+.|.|+|++|++|+..+.+||||++. +++.||++++ +|+||.||+.
T Consensus 12 ~~~~L~V~V~~A~~l~~~g~~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~ 60 (167)
T 2cjs_A 12 ILSLLCVGVKKAKFDGAQEKFNTYVTLK--VQNVESTTIAVRGSQPSWEQD 60 (167)
T ss_dssp CCCEEEEEEEEEECSSCGGGCEEEEEEE--ETTEEEECCCEESSSCEEEEE
T ss_pred ceEEEEEEEEEEECCCCCCCCCeEEEEE--ecceEEEEecCCCCCCCCCCE
Confidence 3679999999999997778899999999 3445777765 7999999965
No 87
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=98.10 E-value=2.2e-06 Score=72.56 Aligned_cols=47 Identities=13% Similarity=0.193 Sum_probs=42.6
Q ss_pred eEEEEEEeeeecCCCCCCCCcEEEEEEcCeEeeeeeee-eccCccceecC
Q 011813 429 GLLSVLVQGAEDVEGENHNNPYAIILYKGDKKRTKVSF-LSLLYTYSLQL 477 (477)
Q Consensus 429 g~L~V~V~~A~~L~~~~~~DPyvkv~l~~~~~kTkv~~-~t~~P~~~~~~ 477 (477)
=-|+|.|.+|.||++ .+|||+++.+.+.++|||+++ ++++|.||+.|
T Consensus 21 msL~V~l~~a~~Lpg--~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F 68 (144)
T 3l9b_A 21 MALIVHLKTVSELRG--RADRIAKVTFRGQSFYSRVLENCEDVADFDETF 68 (144)
T ss_dssp EEEEEEEEEEESCCS--CEEEEEEEEETTEEEECCCEEEECSCEEEEEEE
T ss_pred EEEEEEEEEecCCCC--CCCCeEEEEEeccceeeEEeccCCCCceEcceE
Confidence 469999999999996 699999999999999999998 69999999643
No 88
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=98.06 E-value=2.8e-06 Score=88.76 Aligned_cols=50 Identities=24% Similarity=0.315 Sum_probs=45.4
Q ss_pred cceEEEEEEeeeecCCC---CCCCCcEEEEEEcCeEeeeeeeeeccCccceec
Q 011813 427 GAGLLSVLVQGAEDVEG---ENHNNPYAIILYKGDKKRTKVSFLSLLYTYSLQ 476 (477)
Q Consensus 427 ~~g~L~V~V~~A~~L~~---~~~~DPyvkv~l~~~~~kTkv~~~t~~P~~~~~ 476 (477)
..|.|.|+|.+|+||+. .+.+||||++++++++.||+++++|+||.||..
T Consensus 385 ~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~ 437 (510)
T 3jzy_A 385 GIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFN 437 (510)
T ss_dssp -CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCSSCSSCEEEEE
T ss_pred CCceEEEEeceeecCCCCCCCCCCCeEEEEEECCeeccCCccCCCCCCccCce
Confidence 67899999999999976 468999999999999999999999999999964
No 89
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=97.84 E-value=7.3e-06 Score=88.48 Aligned_cols=50 Identities=18% Similarity=0.197 Sum_probs=44.8
Q ss_pred cceEEEEEEeeeecCCC------CCCCCcEEEEEEcC---eEeeeeeeeeccCccceec
Q 011813 427 GAGLLSVLVQGAEDVEG------ENHNNPYAIILYKG---DKKRTKVSFLSLLYTYSLQ 476 (477)
Q Consensus 427 ~~g~L~V~V~~A~~L~~------~~~~DPyvkv~l~~---~~~kTkv~~~t~~P~~~~~ 476 (477)
..+.|.|+|++|+||+. .+.+||||++++++ +++||+++++|+||.||..
T Consensus 16 ~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEt 74 (749)
T 1cjy_A 16 YSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNET 74 (749)
T ss_dssp CCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEE
T ss_pred CccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeE
Confidence 68999999999999987 36899999999984 6779999999999999854
No 90
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=97.77 E-value=1.8e-05 Score=84.44 Aligned_cols=50 Identities=14% Similarity=0.207 Sum_probs=43.9
Q ss_pred cceEEEEEEeeeecCCC-----CCCCCcEEEEEEcC-----eEeeeeeeeec-cCccceec
Q 011813 427 GAGLLSVLVQGAEDVEG-----ENHNNPYAIILYKG-----DKKRTKVSFLS-LLYTYSLQ 476 (477)
Q Consensus 427 ~~g~L~V~V~~A~~L~~-----~~~~DPyvkv~l~~-----~~~kTkv~~~t-~~P~~~~~ 476 (477)
..+.|+|+|++|+||+. ++.+||||+|.+.+ .++||+++++| +||.||..
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~ 555 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDME 555 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCce
Confidence 67999999999999986 35799999999955 56799999998 99999964
No 91
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=97.68 E-value=5.3e-05 Score=81.91 Aligned_cols=49 Identities=22% Similarity=0.283 Sum_probs=42.8
Q ss_pred ceEEEEEEeeeecCCC---CCCCCcEEEEEE-----cCeEeeeeeeeeccCccceec
Q 011813 428 AGLLSVLVQGAEDVEG---ENHNNPYAIILY-----KGDKKRTKVSFLSLLYTYSLQ 476 (477)
Q Consensus 428 ~g~L~V~V~~A~~L~~---~~~~DPyvkv~l-----~~~~~kTkv~~~t~~P~~~~~ 476 (477)
.+.|.|.|.+|+||+. ++.+||||++++ ...++||+++++|+||.||..
T Consensus 171 ~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~ 227 (674)
T 3pfq_A 171 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNET 227 (674)
T ss_dssp SSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEE
T ss_pred cceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccce
Confidence 4689999999999976 578999999999 446679999999999999854
No 92
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=97.37 E-value=0.00013 Score=79.56 Aligned_cols=49 Identities=18% Similarity=0.185 Sum_probs=42.1
Q ss_pred cceEEEEEEeeeecCCCCCCCCcEEEEEEcC-------eEeeeeeeeec-cCccceec
Q 011813 427 GAGLLSVLVQGAEDVEGENHNNPYAIILYKG-------DKKRTKVSFLS-LLYTYSLQ 476 (477)
Q Consensus 427 ~~g~L~V~V~~A~~L~~~~~~DPyvkv~l~~-------~~~kTkv~~~t-~~P~~~~~ 476 (477)
..+.|+|.|.+|++|+. +.+||||+|.+.+ +++||+++++| +||.||.+
T Consensus 648 ~~~~L~V~Visaq~L~~-~~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~ 704 (816)
T 3qr0_A 648 VAGTIEIKIISAQFLSD-KQISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEK 704 (816)
T ss_dssp CCEEEEEEEEEEECCCS-SCCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCC
T ss_pred cceEEEEEEEEcccCCC-CCCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCc
Confidence 46899999999999986 4799999999975 56699999864 99999964
No 93
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=97.20 E-value=0.00023 Score=77.92 Aligned_cols=48 Identities=21% Similarity=0.133 Sum_probs=40.5
Q ss_pred cceEEEEEEeeeecCCCCCCCCcEEEEEEcC------eEeeee-eeee-ccCcccee
Q 011813 427 GAGLLSVLVQGAEDVEGENHNNPYAIILYKG------DKKRTK-VSFL-SLLYTYSL 475 (477)
Q Consensus 427 ~~g~L~V~V~~A~~L~~~~~~DPyvkv~l~~------~~~kTk-v~~~-t~~P~~~~ 475 (477)
..+.|+|.|++|++|+. +.+||||+|.+.+ +++||+ ++++ ++||.||.
T Consensus 676 ~~~~L~V~Visa~~L~~-~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnE 731 (799)
T 2zkm_X 676 VATTLSITVISGQFLSE-RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKE 731 (799)
T ss_dssp TCEEEEEEEEEEESCCS-SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCC
T ss_pred eeeeEEEEEEeccccCc-cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeec
Confidence 57899999999999986 5799999999953 345899 8775 59999986
No 94
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=97.11 E-value=0.00031 Score=77.14 Aligned_cols=48 Identities=21% Similarity=0.097 Sum_probs=40.8
Q ss_pred cceEEEEEEeeeecCCCCCCCCcEEEEEEcC------eEeeeeeeeec-cCcccee
Q 011813 427 GAGLLSVLVQGAEDVEGENHNNPYAIILYKG------DKKRTKVSFLS-LLYTYSL 475 (477)
Q Consensus 427 ~~g~L~V~V~~A~~L~~~~~~DPyvkv~l~~------~~~kTkv~~~t-~~P~~~~ 475 (477)
....|+|.|++|++|+.. .+||||+|.+.+ .++||+++++| +||.||.
T Consensus 723 ~~~~L~V~Visaq~L~~~-~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnE 777 (885)
T 3ohm_B 723 VANALRVKVISGQFLSDR-KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDE 777 (885)
T ss_dssp CCEEEEEEEEEEESCCSS-CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCC
T ss_pred cceEEEEEEEEeccCccc-CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeecc
Confidence 356899999999999974 799999999975 24699999865 9999986
No 95
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=96.92 E-value=0.0003 Score=62.37 Aligned_cols=32 Identities=19% Similarity=0.190 Sum_probs=28.1
Q ss_pred CCCCcEEEEEEcC------eEeeeeeeeeccCccceec
Q 011813 445 NHNNPYAIILYKG------DKKRTKVSFLSLLYTYSLQ 476 (477)
Q Consensus 445 ~~~DPyvkv~l~~------~~~kTkv~~~t~~P~~~~~ 476 (477)
+.+||||++++++ ++.||+++++|+||.||..
T Consensus 27 g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~ 64 (176)
T 3m7f_B 27 GASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEE 64 (176)
T ss_dssp CCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEE
T ss_pred CCcCcEEEEEEECCCCCcccceeCceECCCCCCcccce
Confidence 5799999999986 5669999999999999964
No 96
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=93.93 E-value=0.87 Score=41.17 Aligned_cols=57 Identities=14% Similarity=0.198 Sum_probs=41.8
Q ss_pred CceeeeeeCCCCCCeeeeEEEEEeecC--CCCeEEEEEEecCCCC----CCCeeEEEEEECcc
Q 011813 299 PWKKTTVKKKNLNPEWNENFKLVVKEP--ESQILQLQVFDWDKVG----GHDRLGMQLVPLKL 355 (477)
Q Consensus 299 ~~~kT~v~~~t~nP~WnE~f~f~v~~~--~~~~L~v~V~d~d~~~----~d~~lG~~~v~L~~ 355 (477)
...+|.|...+.+|.|+|++.+.++.. ....|.|++++...-. .+..+|.+-+||-.
T Consensus 77 se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~~ 139 (220)
T 3l4c_A 77 SEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLMR 139 (220)
T ss_dssp SCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESBC
T ss_pred eeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEccc
Confidence 346788888999999999999998743 3567999998765321 12467888777754
No 97
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=93.06 E-value=0.16 Score=42.23 Aligned_cols=50 Identities=12% Similarity=0.080 Sum_probs=38.6
Q ss_pred cceEEEEEEeeeecCCC----CCCCCcEEEEEEcCeEe----ee-eeeeeccCccceec
Q 011813 427 GAGLLSVLVQGAEDVEG----ENHNNPYAIILYKGDKK----RT-KVSFLSLLYTYSLQ 476 (477)
Q Consensus 427 ~~g~L~V~V~~A~~L~~----~~~~DPyvkv~l~~~~~----kT-kv~~~t~~P~~~~~ 476 (477)
..+.|+|.+.++.--+. ....||||.|.+..... +| .++++|.+|.||..
T Consensus 8 m~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~ 66 (138)
T 2enj_A 8 MSPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDST 66 (138)
T ss_dssp CCCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSE
T ss_pred cCcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccce
Confidence 56789999988875432 34799999999876433 77 77889999999853
No 98
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=92.96 E-value=0.15 Score=41.68 Aligned_cols=50 Identities=14% Similarity=0.188 Sum_probs=37.0
Q ss_pred cceEEEEEEeeeec--CCC-CCCCCcEEEEEEcCeEe----ee-eeeeeccCccceec
Q 011813 427 GAGLLSVLVQGAED--VEG-ENHNNPYAIILYKGDKK----RT-KVSFLSLLYTYSLQ 476 (477)
Q Consensus 427 ~~g~L~V~V~~A~~--L~~-~~~~DPyvkv~l~~~~~----kT-kv~~~t~~P~~~~~ 476 (477)
.+..|+|.+.++.- |+. ....||||.+.+..... +| .++++|.+|.||..
T Consensus 4 m~~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~ 61 (126)
T 1yrk_A 4 MAPFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKST 61 (126)
T ss_dssp CCCEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCE
T ss_pred cCccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccce
Confidence 56789999987764 332 24699999998875442 55 77779999999853
No 99
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=92.55 E-value=2 Score=36.63 Aligned_cols=128 Identities=12% Similarity=0.118 Sum_probs=83.7
Q ss_pred ccCCceEEEEEEEEcccccccc-ccCCCCcEEEEEEcCcccCceeeeeeCCCCCCeeeeEEEEEeecC-------CCCeE
Q 011813 259 IKKPVGILHVKVVRASKLLKKD-FLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEP-------ESQIL 330 (477)
Q Consensus 259 ~~~~~G~L~V~v~~A~~L~~~d-~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~WnE~f~f~v~~~-------~~~~L 330 (477)
...-.+.+.|+|.++.--+..- ..+..+|+.-+.+.=-....+.|.+.. ..+|.+|.+-.+.|... .+..+
T Consensus 13 l~~gEnlfEihi~~~~~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l 91 (156)
T 2yrb_A 13 LERGENLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTI 91 (156)
T ss_dssp CCSSCEEEEEEEEEECCCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCE
T ss_pred ccCCCcEEEEEEeEEEEcHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCE
Confidence 3445689999999987322211 123457766666543344445676655 78999999888888522 14578
Q ss_pred EEEEEecCCCCCCCeeEEEEEECcccCCCCc-eEEEEecccccCCCCCCCC-ccceEEEEEEEEEe
Q 011813 331 QLQVFDWDKVGGHDRLGMQLVPLKLLTPHET-KEFTLDLLKHTNISDPKDM-KQRGKIVVELTYVP 394 (477)
Q Consensus 331 ~v~V~d~d~~~~d~~lG~~~v~L~~l~~~~~-~~~~~~l~~~~~~~~~~~~-~~~G~l~l~l~y~p 394 (477)
.++++.... +..+.+|.+.++|.++..... .....++... .+. ..-|.|.+.++...
T Consensus 92 ~lELhqa~g-~~~~tla~~~I~l~~lLe~~~~i~g~~~L~g~------~g~~~~~G~LeywiRL~~ 150 (156)
T 2yrb_A 92 TLEVHQAYS-TEYETIAACQLKFHEILEKSGRIFCTASLIGT------KGDIPNFGTVEYWFRLRV 150 (156)
T ss_dssp EEEEEEECS-SCEEEEEEEEECCSHHHHCCSCEEEEEEECBS------SSCCTTSEEEEEEEEEEE
T ss_pred EEEEEEeeC-CCceEEEEEEEEhHHhhCcCCceEEEEEEEcC------CCCcceEEEEEEEEEEec
Confidence 999988752 345689999999999875543 3334444321 112 47899999999875
No 100
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=89.25 E-value=1.7 Score=48.06 Aligned_cols=93 Identities=11% Similarity=0.115 Sum_probs=61.8
Q ss_pred CceEEEEEEEEccccccccccCCCCcEEEEEE--cCcccC-ceeeeeeCCCCCCeeeeEEEEEee--c-CCCCeEEEEEE
Q 011813 262 PVGILHVKVVRASKLLKKDFLGTSDPYVKLSL--TGEKLP-WKKTTVKKKNLNPEWNENFKLVVK--E-PESQILQLQVF 335 (477)
Q Consensus 262 ~~G~L~V~v~~A~~L~~~d~~g~~dpyv~v~l--~~~~~~-~~kT~v~~~t~nP~WnE~f~f~v~--~-~~~~~L~v~V~ 335 (477)
-...++|+|.++.++... ..++-||.+.+ |++... ...|+.+.-..+|.|||...|.+. + +....|.+++|
T Consensus 215 ~~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~ 291 (940)
T 2wxf_A 215 LEQPFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALY 291 (940)
T ss_dssp CCSEEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEE
T ss_pred cCCceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEE
Confidence 346799999999988653 34677887765 444332 234544455678999999999875 3 34778999999
Q ss_pred ecCCC--C----------CCCeeEEEEEECcccC
Q 011813 336 DWDKV--G----------GHDRLGMQLVPLKLLT 357 (477)
Q Consensus 336 d~d~~--~----------~d~~lG~~~v~L~~l~ 357 (477)
+.... + .+..+|.+.++|-+..
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~ 325 (940)
T 2wxf_A 292 AVVEKAKKARSTKKKSKKADCPIAWANLMLFDYK 325 (940)
T ss_dssp EEC----------------CEEEEEEEEESBCTT
T ss_pred EecCCccCccccccccccccceEEEEeeeEECCc
Confidence 96432 1 2347888888886644
No 101
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=89.17 E-value=2.1 Score=47.76 Aligned_cols=93 Identities=23% Similarity=0.219 Sum_probs=62.2
Q ss_pred ceEEEEEEEEccccccccccCCCCcEEEEEE--cCcccCc-eeeeeeCCCCCCeeeeEEEEEee--c-CCCCeEEEEEEe
Q 011813 263 VGILHVKVVRASKLLKKDFLGTSDPYVKLSL--TGEKLPW-KKTTVKKKNLNPEWNENFKLVVK--E-PESQILQLQVFD 336 (477)
Q Consensus 263 ~G~L~V~v~~A~~L~~~d~~g~~dpyv~v~l--~~~~~~~-~kT~v~~~t~nP~WnE~f~f~v~--~-~~~~~L~v~V~d 336 (477)
...++|+|.++.++.... ....+-||.+.+ |++.... .+|+. ....+|.|||...|.+. + +....|.++||+
T Consensus 354 ~~~f~v~i~~~~~~n~~~-~~~~~~~V~~~l~hG~~~L~~~~~T~~-~~~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~ 431 (1091)
T 3hhm_A 354 NSALRIKILCATYVNVNI-RDIDKIYVRTGIYHGGEPLCDNVNTQR-VPCSNPRWNEWLNYDIYIPDLPRAARLCLSICS 431 (1091)
T ss_dssp CSEEEEEEEEESCCCCCC-SSCCCCCEEEEEESSSCSSCCEECCCC-CCTTSCEEEEEEEEEEEGGGCCTTCEEEEEECC
T ss_pred CCCEEEEEEEecCCCCCc-cccceEEEEEEEEECCEEccCceeccc-cCCCCCCCCeeEEecCccccCChhcEEEEEEEE
Confidence 457899999998886432 234677888877 4433322 23433 33567889999999875 3 347789999998
Q ss_pred cCCC----CCCCeeEEEEEECcccC
Q 011813 337 WDKV----GGHDRLGMQLVPLKLLT 357 (477)
Q Consensus 337 ~d~~----~~d~~lG~~~v~L~~l~ 357 (477)
.... ..+..+|.+.++|-+..
T Consensus 432 ~~~~~~~~~~~~~lg~~n~~lfd~~ 456 (1091)
T 3hhm_A 432 VKGRKGAKEEHCPLAWGNINLFDYT 456 (1091)
T ss_dssp CCCCC-------CCEEEEEESBCTT
T ss_pred ecCccCcccccceeEEeeeeeEccC
Confidence 7642 12457999999987654
No 102
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=83.45 E-value=3.6 Score=45.58 Aligned_cols=93 Identities=17% Similarity=0.159 Sum_probs=57.8
Q ss_pred eEEEEEEEEccccccccccCCCCcEEEEEE--cCcccCceeeeeeCCCCCCeeeeEEEEEee--c-CCCCeEEEEEEecC
Q 011813 264 GILHVKVVRASKLLKKDFLGTSDPYVKLSL--TGEKLPWKKTTVKKKNLNPEWNENFKLVVK--E-PESQILQLQVFDWD 338 (477)
Q Consensus 264 G~L~V~v~~A~~L~~~d~~g~~dpyv~v~l--~~~~~~~~kT~v~~~t~nP~WnE~f~f~v~--~-~~~~~L~v~V~d~d 338 (477)
..++|+|.++....-.. ...++-||.+.+ |+......+|+.+.-+.+|.|||.+.|.+. + +....|.+++|+..
T Consensus 218 ~~f~i~i~~~~~~~~~~-~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~ 296 (961)
T 1e7u_A 218 RKFRVKIRGIDIPVLPR-TADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGA 296 (961)
T ss_dssp SEEEEEEEEEECSSCCT-TSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEE
T ss_pred CceEEEEeecccccccC-CCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEecc
Confidence 56788888876421111 234577877655 444333334555455668999999999875 3 34778999999864
Q ss_pred CCC----------------CCCeeEEEEEECcccC
Q 011813 339 KVG----------------GHDRLGMQLVPLKLLT 357 (477)
Q Consensus 339 ~~~----------------~d~~lG~~~v~L~~l~ 357 (477)
..+ ++..+|.+.++|-+..
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~~ 331 (961)
T 1e7u_A 297 KPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDHR 331 (961)
T ss_dssp C--------------------CEEEEEEEESBCTT
T ss_pred cCccccccccccccccccccceeEEEEeeeeecCC
Confidence 221 2347888888876644
No 103
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=74.24 E-value=4.2 Score=45.63 Aligned_cols=74 Identities=19% Similarity=0.227 Sum_probs=51.0
Q ss_pred CceEEEEEEEEccccccccccCCCCcEEEEEE--cCcccC-ceeeeeeCCCCCCeeeeEEEEEee--c-CCCCeEEEEEE
Q 011813 262 PVGILHVKVVRASKLLKKDFLGTSDPYVKLSL--TGEKLP-WKKTTVKKKNLNPEWNENFKLVVK--E-PESQILQLQVF 335 (477)
Q Consensus 262 ~~G~L~V~v~~A~~L~~~d~~g~~dpyv~v~l--~~~~~~-~~kT~v~~~t~nP~WnE~f~f~v~--~-~~~~~L~v~V~ 335 (477)
-...++|+|.++.++... ..++-||.+.+ |+.... ..+|+.+..+.+|.|||.+.|.+. + +....|.+++|
T Consensus 351 ~~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~ 427 (1092)
T 2y3a_A 351 NNNPFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVY 427 (1092)
T ss_dssp CCSEEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECC
T ss_pred cCCCEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEE
Confidence 346799999999988654 34677776544 554431 234555555778999999999875 3 33678999999
Q ss_pred ecC
Q 011813 336 DWD 338 (477)
Q Consensus 336 d~d 338 (477)
+..
T Consensus 428 ~~~ 430 (1092)
T 2y3a_A 428 AVL 430 (1092)
T ss_dssp CC-
T ss_pred Eec
Confidence 963
No 104
>1ewf_A BPI, bactericidal/permeability-increasing protein; lipid-binding, lipopolysaccharide-binding, antibiotic; HET: PC1; 1.70A {Homo sapiens} SCOP: d.83.1.1 d.83.1.1 PDB: 1bp1_A*
Probab=54.18 E-value=1.7e+02 Score=28.89 Aligned_cols=20 Identities=10% Similarity=0.192 Sum_probs=15.5
Q ss_pred EEEEEEEEEEEEEEEEEEEe
Q 011813 167 RITVQLVDLQIFAAPRITLK 186 (477)
Q Consensus 167 ~~~v~v~~l~~~g~~rv~l~ 186 (477)
.+.+.++++.+.+.+|+...
T Consensus 103 ~~~~~v~~v~i~~~~~l~~~ 122 (456)
T 1ewf_A 103 NFDLSIEGMSISADLKLGSN 122 (456)
T ss_dssp EEEEEEEEEEEEEEEEEEEE
T ss_pred EEEEEEeeEEEEEEEEEeec
Confidence 56677778888888888765
No 105
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=47.56 E-value=4.2 Score=26.63 Aligned_cols=15 Identities=20% Similarity=0.479 Sum_probs=7.8
Q ss_pred HHHHhheeeeccCCc
Q 011813 23 LVGFFLFIYSKPNDD 37 (477)
Q Consensus 23 ~~~~~~~~~~~~~~r 37 (477)
+++...|.|+|++++
T Consensus 25 ii~~~~~~~~RRRr~ 39 (44)
T 2l2t_A 25 IVGLTFAVYVRRKSI 39 (44)
T ss_dssp HHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHhhhhhh
Confidence 344455556665443
No 106
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=42.43 E-value=7.7 Score=25.35 Aligned_cols=14 Identities=7% Similarity=0.218 Sum_probs=7.1
Q ss_pred HHHHhheeeeccCC
Q 011813 23 LVGFFLFIYSKPND 36 (477)
Q Consensus 23 ~~~~~~~~~~~~~~ 36 (477)
++++..|.|+++++
T Consensus 26 ii~~~~~~~~RRr~ 39 (44)
T 2ks1_B 26 VVALGIGLFMRRRH 39 (44)
T ss_dssp HHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhhhhH
Confidence 33444555666544
No 107
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=37.28 E-value=5.3 Score=26.12 Aligned_cols=21 Identities=24% Similarity=0.407 Sum_probs=10.4
Q ss_pred cchhHHHHHHHhheeeeccCC
Q 011813 16 IGLPLGLLVGFFLFIYSKPND 36 (477)
Q Consensus 16 ~g~~~~~~~~~~~~~~~~~~~ 36 (477)
+|+++.+++++....|+|+++
T Consensus 19 VGvll~vi~~l~~~~~~RRR~ 39 (44)
T 2jwa_A 19 VGILLVVVLGVVFGILIKRRQ 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhheehhh
Confidence 443333444555555666543
Done!