Query 011823
Match_columns 476
No_of_seqs 216 out of 1181
Neff 5.8
Searched_HMMs 46136
Date Fri Mar 29 05:37:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011823.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011823hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00176 galactinol synthase 100.0 1.3E-40 2.8E-45 339.4 22.5 237 38-300 19-300 (333)
2 cd02537 GT8_Glycogenin Glycoge 100.0 8.8E-39 1.9E-43 313.0 21.3 226 42-293 1-238 (240)
3 cd06914 GT8_GNT1 GNT1 is a fun 100.0 2.2E-36 4.8E-41 302.0 18.1 216 42-278 1-242 (278)
4 PRK15171 lipopolysaccharide 1, 100.0 1.4E-31 3E-36 274.6 19.9 234 43-302 24-295 (334)
5 cd00505 Glyco_transf_8 Members 100.0 4.8E-31 1E-35 258.4 18.8 209 43-275 2-245 (246)
6 cd04194 GT8_A4GalT_like A4GalT 100.0 2.9E-30 6.3E-35 252.2 14.9 207 46-275 2-247 (248)
7 PF01501 Glyco_transf_8: Glyco 100.0 2.3E-30 4.9E-35 248.2 11.8 202 57-278 9-250 (250)
8 COG1442 RfaJ Lipopolysaccharid 100.0 2.2E-28 4.7E-33 249.1 19.2 226 46-296 4-265 (325)
9 cd06429 GT8_like_1 GT8_like_1 100.0 1.9E-28 4.2E-33 243.0 16.8 216 46-292 2-256 (257)
10 cd06431 GT8_LARGE_C LARGE cata 100.0 5E-28 1.1E-32 242.8 18.7 218 57-295 11-271 (280)
11 cd06432 GT8_HUGT1_C_like The C 99.9 1.6E-23 3.6E-28 206.8 16.5 191 57-270 11-242 (248)
12 cd06430 GT8_like_2 GT8_like_2 99.9 2.2E-22 4.8E-27 203.3 17.4 202 45-268 3-255 (304)
13 PLN02718 Probable galacturonos 99.9 1.1E-21 2.3E-26 210.7 13.8 225 40-292 309-589 (603)
14 PLN02523 galacturonosyltransfe 99.9 2.5E-21 5.4E-26 205.9 16.1 212 59-292 258-545 (559)
15 PLN02867 Probable galacturonos 99.8 2.2E-21 4.7E-26 206.4 9.8 147 124-292 331-521 (535)
16 PLN02659 Probable galacturonos 99.8 6.8E-21 1.5E-25 202.0 10.2 151 123-295 329-522 (534)
17 PLN02870 Probable galacturonos 99.8 6.1E-21 1.3E-25 202.3 7.7 151 123-295 328-521 (533)
18 PLN02769 Probable galacturonos 99.8 9.8E-20 2.1E-24 196.5 11.8 148 123-293 437-617 (629)
19 PLN02742 Probable galacturonos 99.8 1.6E-18 3.5E-23 184.3 14.5 150 123-295 338-524 (534)
20 PLN02829 Probable galacturonos 99.8 5.6E-19 1.2E-23 189.8 10.0 148 123-293 442-626 (639)
21 PLN02910 polygalacturonate 4-a 99.8 1.5E-18 3.3E-23 186.2 9.9 148 123-292 460-643 (657)
22 COG5597 Alpha-N-acetylglucosam 99.7 6.8E-18 1.5E-22 167.9 1.3 184 38-241 67-316 (368)
23 KOG1950 Glycosyl transferase, 98.5 6.1E-08 1.3E-12 101.3 4.2 158 98-275 125-287 (369)
24 PF03407 Nucleotid_trans: Nucl 98.1 4.4E-05 9.6E-10 73.0 12.5 169 87-268 12-202 (212)
25 PF11051 Mannosyl_trans3: Mann 98.0 3.6E-05 7.9E-10 77.4 10.6 111 58-179 12-124 (271)
26 KOG1879 UDP-glucose:glycoprote 96.6 0.012 2.5E-07 69.1 10.6 200 44-277 1181-1426(1470)
27 PF05637 Glyco_transf_34: gala 91.8 0.11 2.5E-06 51.4 2.6 90 124-214 59-192 (239)
28 PLN03182 xyloglucan 6-xylosylt 91.3 0.67 1.5E-05 49.4 7.8 86 125-213 181-305 (429)
29 KOG1928 Alpha-1,4-N-acetylgluc 91.2 0.17 3.8E-06 53.2 3.3 75 141-215 242-318 (409)
30 PLN03181 glycosyltransferase; 85.2 3.5 7.5E-05 44.3 8.2 89 125-213 182-306 (453)
31 TIGR03472 HpnI hopanoid biosyn 79.8 42 0.0009 35.0 13.9 24 133-156 123-147 (373)
32 PRK11204 N-glycosyltransferase 77.0 31 0.00067 36.2 12.0 84 62-157 69-156 (420)
33 cd04186 GT_2_like_c Subfamily 66.8 33 0.00072 29.7 8.1 105 62-181 12-121 (166)
34 PF00535 Glycos_transf_2: Glyc 65.2 18 0.0004 31.0 6.1 85 62-158 13-101 (169)
35 cd00761 Glyco_tranf_GTA_type G 64.7 23 0.00049 29.5 6.4 82 61-154 11-95 (156)
36 PRK15382 non-LEE encoded effec 61.4 9.5 0.00021 38.3 3.8 47 137-183 211-260 (326)
37 PRK15384 type III secretion sy 60.3 9.7 0.00021 38.3 3.6 47 137-183 216-265 (336)
38 cd06439 CESA_like_1 CESA_like_ 59.0 47 0.001 31.6 8.2 85 62-158 44-132 (251)
39 PRK15383 type III secretion sy 58.8 11 0.00024 37.9 3.7 47 137-183 219-268 (335)
40 PF07801 DUF1647: Protein of u 58.7 43 0.00093 31.0 7.3 63 38-107 58-121 (142)
41 PRK12671 putative monovalent c 57.6 1.3E+02 0.0029 27.0 10.1 95 373-469 15-119 (120)
42 PF04488 Gly_transf_sug: Glyco 57.4 6 0.00013 33.7 1.5 87 64-159 6-99 (103)
43 PRK05454 glucosyltransferase M 56.8 1.1E+02 0.0025 35.2 11.9 108 39-157 123-242 (691)
44 PRK12585 putative monovalent c 56.0 63 0.0014 31.4 8.2 76 371-447 7-92 (197)
45 cd06423 CESA_like CESA_like is 52.4 74 0.0016 27.0 7.7 84 61-156 11-99 (180)
46 cd02515 Glyco_transf_6 Glycosy 51.4 1.2E+02 0.0026 31.1 9.7 105 123-244 103-247 (271)
47 cd06438 EpsO_like EpsO protein 48.2 1E+02 0.0023 27.9 8.3 85 62-157 12-103 (183)
48 COG2943 MdoH Membrane glycosyl 48.1 2.2E+02 0.0048 32.2 11.7 138 9-158 96-263 (736)
49 TIGR03111 glyc2_xrt_Gpos1 puta 46.7 3.2E+02 0.007 29.2 12.9 84 62-156 64-152 (439)
50 cd02525 Succinoglycan_BP_ExoA 46.2 59 0.0013 30.5 6.5 84 62-157 15-103 (249)
51 cd06433 GT_2_WfgS_like WfgS an 45.8 96 0.0021 27.6 7.6 83 62-157 13-97 (202)
52 PRK14583 hmsR N-glycosyltransf 45.2 3.5E+02 0.0075 29.0 12.9 36 135-170 154-194 (444)
53 cd06420 GT2_Chondriotin_Pol_N 44.7 1.6E+02 0.0035 26.1 8.9 86 62-158 12-102 (182)
54 TIGR03469 HonB hopene-associat 43.2 1.8E+02 0.0039 30.5 10.1 21 137-157 134-155 (384)
55 PRK12586 putative monovalent c 41.9 1.2E+02 0.0026 28.2 7.5 76 371-447 10-95 (145)
56 cd06421 CESA_CelA_like CESA_Ce 41.0 2.8E+02 0.0062 25.6 10.3 82 62-152 17-100 (234)
57 cd06434 GT2_HAS Hyaluronan syn 40.8 2.7E+02 0.0058 25.9 10.1 83 62-158 16-100 (235)
58 PF10111 Glyco_tranf_2_2: Glyc 40.2 81 0.0018 31.5 6.7 88 62-158 19-111 (281)
59 cd04192 GT_2_like_e Subfamily 39.9 1.7E+02 0.0036 26.9 8.4 26 133-158 79-105 (229)
60 PF06570 DUF1129: Protein of u 39.4 2E+02 0.0042 27.7 9.0 21 364-384 170-191 (206)
61 PF03414 Glyco_transf_6: Glyco 39.3 1.8E+02 0.004 30.6 9.2 110 120-246 164-314 (337)
62 PRK13735 conjugal transfer mat 37.9 64 0.0014 38.5 6.2 81 357-447 342-429 (942)
63 PRK11056 hypothetical protein; 36.7 31 0.00068 30.9 2.7 37 370-406 65-109 (120)
64 PRK12675 putative monovalent c 36.6 1.8E+02 0.0038 25.5 7.3 74 372-447 2-85 (104)
65 KOG1950 Glycosyl transferase, 36.0 14 0.00031 38.8 0.5 246 124-432 112-367 (369)
66 PF07226 DUF1422: Protein of u 34.9 39 0.00085 30.2 3.0 37 370-406 65-109 (117)
67 cd02510 pp-GalNAc-T pp-GalNAc- 34.3 2.1E+02 0.0045 28.5 8.6 25 134-158 81-106 (299)
68 PRK11498 bcsA cellulose syntha 34.1 5.4E+02 0.012 30.6 12.9 64 77-153 292-356 (852)
69 PRK12672 putative monovalent c 34.0 2E+02 0.0043 25.7 7.4 77 371-447 5-98 (118)
70 cd04196 GT_2_like_d Subfamily 33.2 2.5E+02 0.0054 25.4 8.4 28 132-159 75-103 (214)
71 PF09680 Tiny_TM_bacill: Prote 32.8 36 0.00078 22.2 1.7 19 10-28 3-21 (24)
72 PF03314 DUF273: Protein of un 32.5 1.2E+02 0.0026 30.1 6.1 79 134-214 39-127 (222)
73 cd04195 GT2_AmsE_like GT2_AmsE 32.1 1.4E+02 0.0031 27.0 6.6 79 62-152 15-96 (201)
74 PRK10447 HflBKC-binding inner 32.1 3.5E+02 0.0077 26.7 9.5 93 335-432 18-116 (219)
75 cd06427 CESA_like_2 CESA_like_ 31.9 1.6E+02 0.0034 28.1 7.1 79 62-152 16-100 (241)
76 PF05704 Caps_synth: Capsular 31.6 3.2E+02 0.007 27.7 9.5 118 59-193 59-186 (276)
77 PF13704 Glyco_tranf_2_4: Glyc 31.3 2.4E+02 0.0051 22.9 7.2 70 75-152 18-87 (97)
78 cd06437 CESA_CaSu_A2 Cellulose 31.0 2.4E+02 0.0053 26.4 8.1 20 133-152 84-103 (232)
79 COG1215 Glycosyltransferases, 30.1 4.3E+02 0.0094 27.4 10.5 39 135-173 136-178 (439)
80 cd02511 Beta4Glucosyltransfera 29.7 3.5E+02 0.0077 25.6 9.1 73 62-152 15-87 (229)
81 cd04185 GT_2_like_b Subfamily 29.6 2E+02 0.0043 26.2 7.1 89 62-158 12-102 (202)
82 PF02485 Branch: Core-2/I-Bran 29.6 1.5E+02 0.0032 28.7 6.5 101 43-158 2-110 (244)
83 TIGR01732 tiny_TM_bacill conse 27.5 54 0.0012 21.8 1.9 19 10-28 5-23 (26)
84 cd06435 CESA_NdvC_like NdvC_li 27.3 3.5E+02 0.0076 25.2 8.5 21 136-156 84-105 (236)
85 PF04765 DUF616: Protein of un 26.2 91 0.002 32.4 4.4 105 39-159 62-175 (305)
86 COG0463 WcaA Glycosyltransfera 26.2 2E+02 0.0042 24.3 6.0 81 61-152 17-98 (291)
87 cd04179 DPM_DPG-synthase_like 25.3 1.1E+02 0.0025 27.1 4.6 27 133-159 76-103 (185)
88 cd06913 beta3GnTL1_like Beta 1 25.3 5.1E+02 0.011 24.0 9.2 32 126-157 74-106 (219)
89 cd06442 DPM1_like DPM1_like re 25.3 3E+02 0.0066 25.2 7.6 26 133-158 75-101 (224)
90 PRK12670 putative monovalent c 24.3 4.7E+02 0.01 22.6 8.1 73 371-446 4-86 (99)
91 PRK10921 twin-arginine protein 23.3 7.7E+02 0.017 24.8 10.8 58 367-426 144-217 (258)
92 COG0805 TatC Sec-independent p 23.2 6.8E+02 0.015 25.4 9.9 62 365-428 146-223 (255)
93 cd02520 Glucosylceramide_synth 22.9 2.5E+02 0.0054 25.8 6.4 27 132-158 82-109 (196)
94 PLN02797 phosphatidyl-N-dimeth 22.1 1.8E+02 0.0039 27.4 5.1 57 325-385 25-81 (164)
95 cd02514 GT13_GLCNAC-TI GT13_GL 21.7 5.4E+02 0.012 27.1 9.2 94 61-158 14-119 (334)
96 TIGR03030 CelA cellulose synth 21.6 7.5E+02 0.016 28.5 11.1 19 134-152 226-244 (713)
97 PRK12587 putative monovalent c 20.9 4.8E+02 0.01 23.4 7.4 76 371-447 8-93 (118)
98 TIGR01300 CPA3_mnhG_phaG monov 20.7 4.2E+02 0.009 22.8 6.8 72 376-448 2-83 (97)
99 PF03334 PhaG_MnhG_YufB: Na+/H 20.3 3.9E+02 0.0085 22.0 6.3 61 377-440 2-72 (81)
100 TIGR00869 sec62 protein transl 20.0 2.2E+02 0.0048 28.5 5.6 32 402-440 153-184 (232)
No 1
>PLN00176 galactinol synthase
Probab=100.00 E-value=1.3e-40 Score=339.44 Aligned_cols=237 Identities=23% Similarity=0.368 Sum_probs=185.5
Q ss_pred CCCCeEEEEEEeecCCCCccchHHHHHHHHHHHHhCCCCcEEEEEcCCCCHHHHHHHHhhCCCEEEEEeccCCccccccc
Q 011823 38 QRHKNAYATMMYMGTPRDYEFYVATRVMIRSLVRLHVDADIVVIASLDVPLRWVQALEQEDGAKVVRVENLNNPYKDQAN 117 (476)
Q Consensus 38 ~~~~~AYvTivy~~t~~dYeyl~ga~VL~~SL~~~ns~~dlvVlvt~~Is~e~~~~L~~~~g~~v~~V~~i~~p~~~~~~ 117 (476)
..+++||||++++ |+ +|+.|+.+|++||+++++++|++++++++++++++++|++ .|+++++|+.+..+..+...
T Consensus 19 ~~~~~AyVT~L~~--n~--~Y~~Ga~vL~~SLr~~~s~~~lVvlVt~dVp~e~r~~L~~-~g~~V~~V~~i~~~~~~~~~ 93 (333)
T PLN00176 19 KPAKRAYVTFLAG--NG--DYVKGVVGLAKGLRKVKSAYPLVVAVLPDVPEEHRRILVS-QGCIVREIEPVYPPENQTQF 93 (333)
T ss_pred ccCceEEEEEEec--Cc--chHHHHHHHHHHHHHhCCCCCEEEEECCCCCHHHHHHHHH-cCCEEEEecccCCccccccc
Confidence 3678999998863 44 4699999999999999999999999999999999999999 99999999887644432111
Q ss_pred ccchhhhhhHhhhhhhccCcCeEEEEcCCeecccCchhhhcCC--Ceeeeec--------------------------C-
Q 011823 118 FDRRFKLTLNKLYAWNLVDYDRVVMLDSDNLFLEKTDELFQCG--QFCAVFI--------------------------N- 168 (476)
Q Consensus 118 ~~~r~~~ty~KL~i~~L~eydRVLYLDaD~LVl~nLdeLFd~~--~~~Aa~d--------------------------~- 168 (476)
...++..+|+||++|++++||||||||||++|++||||||+++ .++|+.+ +
T Consensus 94 ~~~~~~i~~tKl~iw~l~~ydkvlyLDaD~lv~~nid~Lf~~~~~~~aAV~dc~~~~~~~~~p~~~~~~c~~~~~~~~wp 173 (333)
T PLN00176 94 AMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFENIDHLFDLPDGYFYAVMDCFCEKTWSHTPQYKIGYCQQCPDKVTWP 173 (333)
T ss_pred ccchhhhhhhhhhhccccccceEEEecCCEEeecChHHHhcCCCcceEEEecccccccccccccccccccccchhhccch
Confidence 2345678999999999999999999999999999999999986 3555542 0
Q ss_pred -------CCCccceEEEEeCCHHHHHHHHHHHHhCCCCCCCCchhHHhcccCCCCCCCccCCCCCCCCCCCceeCCcccc
Q 011823 169 -------PCIFHTGLFVLQPSETVFKDMIHELETGRENPDGADQGFIASYFPDLLDKPMFHPSLNGTKLEGHYRLPLGYQ 241 (476)
Q Consensus 169 -------P~yFNSGVmvInps~~~f~~lle~l~~~~~~~~~~DQDiLN~~f~d~~~~~lf~p~~~~~~ld~~~rLp~~YN 241 (476)
+.||||||||+||+.++++++++.+... ....++|||+||.+|.+ .+.+||.+||
T Consensus 174 ~~~g~~~~~yFNSGVlvinps~~~~~~ll~~l~~~-~~~~f~DQD~LN~~F~~-----------------~~~~Lp~~YN 235 (333)
T PLN00176 174 AELGPPPPLYFNAGMFVFEPSLSTYEDLLETLKIT-PPTPFAEQDFLNMFFRD-----------------IYKPIPPVYN 235 (333)
T ss_pred hhccCCCCCeEEeEEEEEEcCHHHHHHHHHHHHhc-CCCCCCCHHHHHHHHcC-----------------cEEECCchhc
Confidence 1499999999999999999999987653 34578999999999998 6999999999
Q ss_pred ccchhcc-cccccCCCCCCCeEEEeeCCCCCCCCcccccC-c------ccchhhhHHHH-HHhcCCCc
Q 011823 242 MDASYYY-LRLRWSVPCGPNSVITFPGAPWLKPWYWWSWP-V------LPLGIEWHKHR-LQTLGYSA 300 (476)
Q Consensus 242 ~~~~~~y-l~~~w~~~~~~~~IIHFtg~p~~KPW~~ws~p-~------~~l~~~W~~~r-~~t~~~~~ 300 (476)
++..+.+ .+..|+ .++++||||+|.. .|||+.-... . ..+...|.+.. .+++.|..
T Consensus 236 ~~~~~~~~~~~~~~--~~~vkIIHY~~~~-~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~~~~~~~~~ 300 (333)
T PLN00176 236 LVLAMLWRHPENVE--LDKVKVVHYCAAG-SKPWRYTGKEENMDREDIKMLVKKWWDIYNDESLDYKN 300 (333)
T ss_pred CchhhhhhChhhcc--cCCcEEEEeeCCC-CCCCCCCCcccCCChHHHHHHHHHHHHHhccccccccc
Confidence 9976443 233343 4578999999731 6999854321 1 22334566644 45555544
No 2
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.
Probab=100.00 E-value=8.8e-39 Score=312.96 Aligned_cols=226 Identities=36% Similarity=0.555 Sum_probs=185.0
Q ss_pred eEEEEEEeecCCCCccchHHHHHHHHHHHHhCCCCcEEEEEcCCCCHHHHHHHHhhCCCEEEEEeccCCcccccccccch
Q 011823 42 NAYATMMYMGTPRDYEFYVATRVMIRSLVRLHVDADIVVIASLDVPLRWVQALEQEDGAKVVRVENLNNPYKDQANFDRR 121 (476)
Q Consensus 42 ~AYvTivy~~t~~dYeyl~ga~VL~~SL~~~ns~~dlvVlvt~~Is~e~~~~L~~~~g~~v~~V~~i~~p~~~~~~~~~r 121 (476)
+||||+++ ++ +|+.++.|+++||++++++++++++++++++++++++|++ .|.+++.++.++.+.........+
T Consensus 1 ~ay~t~~~---~~--~Y~~~a~vl~~SL~~~~~~~~~~vl~~~~is~~~~~~L~~-~~~~~~~v~~i~~~~~~~~~~~~~ 74 (240)
T cd02537 1 EAYVTLLT---ND--DYLPGALVLGYSLRKVGSSYDLVVLVTPGVSEESREALEE-VGWIVREVEPIDPPDSANLLKRPR 74 (240)
T ss_pred CEEEEEec---Ch--hHHHHHHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHH-cCCEEEecCccCCcchhhhccchH
Confidence 59999994 34 5689999999999999999999999999999999999999 899988888776543321112345
Q ss_pred hhhhhHhhhhhhccCcCeEEEEcCCeecccCchhhhcC-CCeeeeecC--CCCccceEEEEeCCHHHHHHHHHHHHhCCC
Q 011823 122 FKLTLNKLYAWNLVDYDRVVMLDSDNLFLEKTDELFQC-GQFCAVFIN--PCIFHTGLFVLQPSETVFKDMIHELETGRE 198 (476)
Q Consensus 122 ~~~ty~KL~i~~L~eydRVLYLDaD~LVl~nLdeLFd~-~~~~Aa~d~--P~yFNSGVmvInps~~~f~~lle~l~~~~~ 198 (476)
+..+|+||++|++.+||||||||+|++|++|||+||+. +.++|+.+. +.|||||||+++|+.+.++++++.+.+..
T Consensus 75 ~~~~~~kl~~~~l~~~drvlylD~D~~v~~~i~~Lf~~~~~~~a~~d~~~~~~fNsGv~l~~~~~~~~~~~~~~~~~~~- 153 (240)
T cd02537 75 FKDTYTKLRLWNLTEYDKVVFLDADTLVLRNIDELFDLPGEFAAAPDCGWPDLFNSGVFVLKPSEETFNDLLDALQDTP- 153 (240)
T ss_pred HHHHhHHHHhccccccceEEEEeCCeeEccCHHHHhCCCCceeeecccCccccccceEEEEcCCHHHHHHHHHHHhccC-
Confidence 67899999999999999999999999999999999999 468888765 37999999999999999999999887644
Q ss_pred CCCCCchhHHhcccCCCCCCCccCCCCCCCCCCC--ceeCCccccccchhcccccccCCCCCCCeEEEeeCCCCCCCCcc
Q 011823 199 NPDGADQGFIASYFPDLLDKPMFHPSLNGTKLEG--HYRLPLGYQMDASYYYLRLRWSVPCGPNSVITFPGAPWLKPWYW 276 (476)
Q Consensus 199 ~~~~~DQDiLN~~f~d~~~~~lf~p~~~~~~ld~--~~rLp~~YN~~~~~~yl~~~w~~~~~~~~IIHFtg~p~~KPW~~ 276 (476)
++.++|||+||.+|.+ + +..||.+||++.+.++...++....++++||||+|. .|||+.
T Consensus 154 ~~~~~DQdiLN~~~~~-----------------~~~~~~l~~~yN~~~~~~~~~~~~~~~~~~~~iiHf~g~--~KPW~~ 214 (240)
T cd02537 154 SFDGGDQGLLNSYFSD-----------------RGIWKRLPFTYNALKPLRYLHPEALWFGDEIKVVHFIGG--DKPWSW 214 (240)
T ss_pred CCCCCCHHHHHHHHcC-----------------CCCEeECCcceeeehhhhccCchhhcccCCcEEEEEeCC--CCCCCC
Confidence 3778999999999987 4 899999999998755432221112356799999997 699998
Q ss_pred cccC-------cccchhhhHHHHH
Q 011823 277 WSWP-------VLPLGIEWHKHRL 293 (476)
Q Consensus 277 ws~p-------~~~l~~~W~~~r~ 293 (476)
++.+ ...++..|+++..
T Consensus 215 ~~~~~~~~~~~~~~~~~~w~~~~~ 238 (240)
T cd02537 215 WRDPETKEKDDYNELHQWWWDIYD 238 (240)
T ss_pred CcCCCcccccchHHHHHHHHHHHh
Confidence 8765 3455566666553
No 3
>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases.
Probab=100.00 E-value=2.2e-36 Score=301.98 Aligned_cols=216 Identities=24% Similarity=0.366 Sum_probs=166.1
Q ss_pred eEEEEEEeecCCCCccchHHHHHHHHHHHHhCCCCcEEEEEcCCCCHHHHHHH-------HhhCCCEEEEEeccCCcccc
Q 011823 42 NAYATMMYMGTPRDYEFYVATRVMIRSLVRLHVDADIVVIASLDVPLRWVQAL-------EQEDGAKVVRVENLNNPYKD 114 (476)
Q Consensus 42 ~AYvTivy~~t~~dYeyl~ga~VL~~SL~~~ns~~dlvVlvt~~Is~e~~~~L-------~~~~g~~v~~V~~i~~p~~~ 114 (476)
+||||++ |++ +|+.|+.++++||+++++++|+|+++++++++...+.+ .+ .+..+..++.+..+.
T Consensus 1 fAYvtl~---Tn~--~YL~gAlvL~~sLr~~gs~~dlVvLvt~~~~~~~~~~~~~~~~~l~~-~~~~v~~v~~~~~~~-- 72 (278)
T cd06914 1 YAYVNYA---TNA--DYLCNALILFEQLRRLGSKAKLVLLVPETLLDRNLDDFVRRDLLLAR-DKVIVKLIPVIIASG-- 72 (278)
T ss_pred CeEEEEe---cCh--hHHHHHHHHHHHHHHhCCCCCEEEEECCCCChhhhhhHHHHHHHhhc-cCcEEEEcCcccCCC--
Confidence 6999999 555 56999999999999999999999999999986543322 22 577776666544332
Q ss_pred cccccchhhhhhHhhhhhhccCcCeEEEEcCCeecccCchhhhcCC-C-eeeeecCCCCccceEEEEeCCHHHHHHHHHH
Q 011823 115 QANFDRRFKLTLNKLYAWNLVDYDRVVMLDSDNLFLEKTDELFQCG-Q-FCAVFINPCIFHTGLFVLQPSETVFKDMIHE 192 (476)
Q Consensus 115 ~~~~~~r~~~ty~KL~i~~L~eydRVLYLDaD~LVl~nLdeLFd~~-~-~~Aa~d~P~yFNSGVmvInps~~~f~~lle~ 192 (476)
..++|..+|+||++|++++||||||||||++|++|+||||+++ . ..|+++...|||||||||||+.++++++++.
T Consensus 73 ---~~~~~~~~~tKl~~~~l~~y~kvlyLDaD~l~~~~ideLf~~~~~~~~Aap~~~~~FNSGvmvi~ps~~~~~~l~~~ 149 (278)
T cd06914 73 ---GDAYWAKSLTKLRAFNQTEYDRIIYFDSDSIIRHPMDELFFLPNYIKFAAPRAYWKFASHLMVIKPSKEAFKELMTE 149 (278)
T ss_pred ---CCccHHHHHHHHHhccccceeeEEEecCChhhhcChHHHhcCCcccceeeecCcceecceeEEEeCCHHHHHHHHHH
Confidence 2357778899999999999999999999999999999999997 2 2345543459999999999999999999998
Q ss_pred HHhCC-CCCCCCchhHHhcccCCCCCCCccCCCCCCCCCCCceeCCcc-ccccchhccc-------------ccccCC--
Q 011823 193 LETGR-ENPDGADQGFIASYFPDLLDKPMFHPSLNGTKLEGHYRLPLG-YQMDASYYYL-------------RLRWSV-- 255 (476)
Q Consensus 193 l~~~~-~~~~~~DQDiLN~~f~d~~~~~lf~p~~~~~~ld~~~rLp~~-YN~~~~~~yl-------------~~~w~~-- 255 (476)
+.+.. .+..++|||+||.+|.|+.++ |.| ++..||.+ ||...+.+.. ..+|+.
T Consensus 150 ~~~~~~~~~~~~DQdiLN~~~~~~~~~--~~~--------~~~~Lp~~~y~llt~~~r~~~~~~~l~~~~~~~~~w~~~~ 219 (278)
T cd06914 150 ILPAYLNKKNEYDMDLINEEFYNSKQL--FKP--------SVLVLPHRQYGLLTGEFREKLHKSFLSNAQHLYEKWDPDD 219 (278)
T ss_pred HHHhcccCCCCCChHHHHHHHhCCccc--cCc--------ceEEcCccccccCChhhcccCHHHhhccccccccccCHHH
Confidence 76532 233678999999999985322 222 36677765 7766653221 224553
Q ss_pred CCCCCeEEEeeCCCCCCCCcccc
Q 011823 256 PCGPNSVITFPGAPWLKPWYWWS 278 (476)
Q Consensus 256 ~~~~~~IIHFtg~p~~KPW~~ws 278 (476)
..++.++|||++.|+.|||..++
T Consensus 220 ~~~~~k~vHFSd~Pl~KPW~~~~ 242 (278)
T cd06914 220 VFKESKVIHFSDSPLPKPWNYNN 242 (278)
T ss_pred HHhhCeEEEecCCCCCCCcCCcC
Confidence 23678999999999999999876
No 4
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=99.98 E-value=1.4e-31 Score=274.56 Aligned_cols=234 Identities=15% Similarity=0.171 Sum_probs=168.3
Q ss_pred EEEEEEeecCCCCccchHHHHHHHHHHHHhCCCCcEEEE-EcCCCCHHHHHHHHhh---CCCEEEEEeccCCcccccccc
Q 011823 43 AYATMMYMGTPRDYEFYVATRVMIRSLVRLHVDADIVVI-ASLDVPLRWVQALEQE---DGAKVVRVENLNNPYKDQANF 118 (476)
Q Consensus 43 AYvTivy~~t~~dYeyl~ga~VL~~SL~~~ns~~dlvVl-vt~~Is~e~~~~L~~~---~g~~v~~V~~i~~p~~~~~~~ 118 (476)
--++++++ +|+ .|+.+++|++.||.+||++.++.++ +++++|++++++|++. .+.++..+. ++.........
T Consensus 24 ~~i~Iv~~-~D~--ny~~~~~vsi~Sil~nn~~~~~~f~Il~~~is~e~~~~l~~l~~~~~~~i~~~~-id~~~~~~~~~ 99 (334)
T PRK15171 24 NSLDIAYG-IDK--NFLFGCGVSIASVLLNNPDKSLVFHVFTDYISDADKQRFSALAKQYNTRINIYL-INCERLKSLPS 99 (334)
T ss_pred CceeEEEE-CcH--hhHHHHHHHHHHHHHhCCCCCEEEEEEeCCCCHHHHHHHHHHHHhcCCeEEEEE-eCHHHHhCCcc
Confidence 35889988 666 4589999999999999887666553 4789999999988774 355543222 22111111111
Q ss_pred cchh-hhhhHhhhhhhcc--CcCeEEEEcCCeecccCchhhhcCC----Ceeeee-c--------------CC----CCc
Q 011823 119 DRRF-KLTLNKLYAWNLV--DYDRVVMLDSDNLFLEKTDELFQCG----QFCAVF-I--------------NP----CIF 172 (476)
Q Consensus 119 ~~r~-~~ty~KL~i~~L~--eydRVLYLDaD~LVl~nLdeLFd~~----~~~Aa~-d--------------~P----~yF 172 (476)
..++ .++|.||.++++. ++|||||||||+||.+||++||+++ .++|+. + .| +||
T Consensus 100 ~~~~s~atY~Rl~ip~llp~~~dkvLYLD~Diiv~~dl~~L~~~dl~~~~~aav~~d~~~~~~~~~~~~l~~~~~~~~YF 179 (334)
T PRK15171 100 TKNWTYATYFRFIIADYFIDKTDKVLYLDADIACKGSIKELIDLDFAENEIAAVVAEGDAEWWSKRAQSLQTPGLASGYF 179 (334)
T ss_pred cCcCCHHHHHHHHHHHhhhhhcCEEEEeeCCEEecCCHHHHHhccCCCCeEEEEEeccchhHHHHHHHhcCCccccccce
Confidence 2344 5899999999973 6999999999999999999999986 355553 1 11 499
Q ss_pred cceEEEEeCCHHHHHHHHHHH----HhC--CCCCCCCchhHHhcccCCCCCCCccCCCCCCCCCCCceeCCccccccchh
Q 011823 173 HTGLFVLQPSETVFKDMIHEL----ETG--RENPDGADQGFIASYFPDLLDKPMFHPSLNGTKLEGHYRLPLGYQMDASY 246 (476)
Q Consensus 173 NSGVmvInps~~~f~~lle~l----~~~--~~~~~~~DQDiLN~~f~d~~~~~lf~p~~~~~~ld~~~rLp~~YN~~~~~ 246 (476)
|||||+||.+.++.+++.+.+ ... .+++.++|||+||.+|.| ++..||.+||.+.+.
T Consensus 180 NsGVlliNl~~wRe~~i~~k~~~~l~~~~~~~~~~~~DQDiLN~~~~~-----------------~~~~L~~~wN~~~~~ 242 (334)
T PRK15171 180 NSGFLLINIPAWAQENISAKAIEMLADPEIVSRITHLDQDVLNILLAG-----------------KVKFIDAKYNTQFSL 242 (334)
T ss_pred ecceEEEcHHHHHHhhHHHHHHHHHhccccccceeecChhHHHHHHcC-----------------CeEECCHhhCCccch
Confidence 999999999988776665543 322 235678999999999998 699999999998654
Q ss_pred cccccc-c-CCCCCCCeEEEeeCCCCCCCCcccccCcccchhhhHHHHHHhcCCCcch
Q 011823 247 YYLRLR-W-SVPCGPNSVITFPGAPWLKPWYWWSWPVLPLGIEWHKHRLQTLGYSAEM 302 (476)
Q Consensus 247 ~yl~~~-w-~~~~~~~~IIHFtg~p~~KPW~~ws~p~~~l~~~W~~~r~~t~~~~~~~ 302 (476)
.+...+ . ....++++||||+|. .|||+.|+ .++....|.++..+| .|.++.
T Consensus 243 ~~~~~~~~~~~~~~~p~IIHy~G~--~KPW~~~~--~~~~~~~f~~~~~~s-pw~~~~ 295 (334)
T PRK15171 243 NYELKDSVINPVNDETVFIHYIGP--TKPWHSWA--DYPVSQYFLKAKEAS-PWKNEA 295 (334)
T ss_pred hHHHHhcccccccCCCEEEEECCC--CCCCCCCC--CCchHHHHHHHHhcC-CCCCcc
Confidence 332111 1 111246799999998 89999766 566667788877777 566644
No 5
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=99.97 E-value=4.8e-31 Score=258.40 Aligned_cols=209 Identities=25% Similarity=0.383 Sum_probs=149.2
Q ss_pred EEEEEEeecCCCCccchHHHHHHHHHHHHhCCCCcEEE-EEcCCCCHHHHHHHHhh---CCCE--EEEEeccCCcccccc
Q 011823 43 AYATMMYMGTPRDYEFYVATRVMIRSLVRLHVDADIVV-IASLDVPLRWVQALEQE---DGAK--VVRVENLNNPYKDQA 116 (476)
Q Consensus 43 AYvTivy~~t~~dYeyl~ga~VL~~SL~~~ns~~dlvV-lvt~~Is~e~~~~L~~~---~g~~--v~~V~~i~~p~~~~~ 116 (476)
+++++. +++ +|+.++.|+++||++++++ ++.+ +++++++++++++|++. .+.+ ++.++.... ....
T Consensus 2 ~i~~~a---~d~--~y~~~~~v~i~Sl~~~~~~-~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~~~~~~~--~~~~ 73 (246)
T cd00505 2 AIVIVA---TGD--EYLRGAIVLMKSVLRHRTK-PLRFHVLTNPLSDTFKAALDNLRKLYNFNYELIPVDILDS--VDSE 73 (246)
T ss_pred eEEEEe---cCc--chhHHHHHHHHHHHHhCCC-CeEEEEEEccccHHHHHHHHHHHhccCceEEEEeccccCc--chhh
Confidence 566666 444 4689999999999999876 4444 34688999999999874 2333 333332111 1101
Q ss_pred cccch-hhhhhHhhhhhhccC-cCeEEEEcCCeecccCchhhhcCC---C-eeeeec------------------CCCCc
Q 011823 117 NFDRR-FKLTLNKLYAWNLVD-YDRVVMLDSDNLFLEKTDELFQCG---Q-FCAVFI------------------NPCIF 172 (476)
Q Consensus 117 ~~~~r-~~~ty~KL~i~~L~e-ydRVLYLDaD~LVl~nLdeLFd~~---~-~~Aa~d------------------~P~yF 172 (476)
...++ ...+|+||+++++.+ +|||||||+|++|++|++|||+++ . ++|+++ ..+||
T Consensus 74 ~~~~~~~~~~y~RL~i~~llp~~~kvlYLD~D~iv~~di~~L~~~~l~~~~~aav~d~~~~~~~~~~~~~~~~~~~~~yf 153 (246)
T cd00505 74 HLKRPIKIVTLTKLHLPNLVPDYDKILYVDADILVLTDIDELWDTPLGGQELAAAPDPGDRREGKYYRQKRSHLAGPDYF 153 (246)
T ss_pred hhcCccccceeHHHHHHHHhhccCeEEEEcCCeeeccCHHHHhhccCCCCeEEEccCchhhhccchhhcccCCCCCCCce
Confidence 11123 358999999999865 999999999999999999999986 2 445443 12599
Q ss_pred cceEEEEeCCHHHHHHHHHHHHh----CCCCCCCCchhHHhcccCCCCCCCccCCCCCCCCCCCceeCCccccccchhcc
Q 011823 173 HTGLFVLQPSETVFKDMIHELET----GRENPDGADQGFIASYFPDLLDKPMFHPSLNGTKLEGHYRLPLGYQMDASYYY 248 (476)
Q Consensus 173 NSGVmvInps~~~f~~lle~l~~----~~~~~~~~DQDiLN~~f~d~~~~~lf~p~~~~~~ld~~~rLp~~YN~~~~~~y 248 (476)
|||||++|+++++++++.+...+ ..++..++|||+||.+|.+. + ..+..||.+||++....+
T Consensus 154 NsGVmlinl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~~~~~---~-----------~~i~~L~~~wN~~~~~~~ 219 (246)
T cd00505 154 NSGVFVVNLSKERRNQLLKVALEKWLQSLSSLSGGDQDLLNTFFKQV---P-----------FIVKSLPCIWNVRLTGCY 219 (246)
T ss_pred eeeeEEEechHHHHHHHHHHHHHHHHhhcccCccCCcHHHHHHHhcC---C-----------CeEEECCCeeeEEecCcc
Confidence 99999999999988887765422 23456789999999999871 0 038999999999976433
Q ss_pred cccc-cCCCCCCCeEEEeeCCCCCCCCc
Q 011823 249 LRLR-WSVPCGPNSVITFPGAPWLKPWY 275 (476)
Q Consensus 249 l~~~-w~~~~~~~~IIHFtg~p~~KPW~ 275 (476)
...+ .....++++||||+|. .|||+
T Consensus 220 ~~~~~~~~~~~~~~iiHy~g~--~KPW~ 245 (246)
T cd00505 220 RSLNCFKAFVKNAKVIHFNGP--TKPWN 245 (246)
T ss_pred ccccchhhhcCCCEEEEeCCC--CCCCC
Confidence 2211 1113457899999998 79997
No 6
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=99.97 E-value=2.9e-30 Score=252.20 Aligned_cols=207 Identities=19% Similarity=0.290 Sum_probs=150.1
Q ss_pred EEEeecCCCCccchHHHHHHHHHHHHhCCCCcEEEE-EcCCCCHHHHHHHHhh---CCCEEEEEeccCCccccccc-ccc
Q 011823 46 TMMYMGTPRDYEFYVATRVMIRSLVRLHVDADIVVI-ASLDVPLRWVQALEQE---DGAKVVRVENLNNPYKDQAN-FDR 120 (476)
Q Consensus 46 Tivy~~t~~dYeyl~ga~VL~~SL~~~ns~~dlvVl-vt~~Is~e~~~~L~~~---~g~~v~~V~~i~~p~~~~~~-~~~ 120 (476)
+++++ +|+ .|+.++++++.||++++++.++.++ ++++++++.++.|++. .+..+..++ ++.+...... ..+
T Consensus 2 ~I~~~-~d~--~y~~~~~~~l~Sl~~~~~~~~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~-i~~~~~~~~~~~~~ 77 (248)
T cd04194 2 NIVFA-IDD--NYAPYLAVTIKSILANNSKRDYDFYILNDDISEENKKKLKELLKKYNSSIEFIK-IDNDDFKFFPATTD 77 (248)
T ss_pred CEEEE-ecH--hhHHHHHHHHHHHHhcCCCCceEEEEEeCCCCHHHHHHHHHHHHhcCCeEEEEE-cCHHHHhcCCcccc
Confidence 45665 555 5689999999999999885555443 4678999999999885 144443222 3332221111 233
Q ss_pred hh-hhhhHhhhhhhcc-CcCeEEEEcCCeecccCchhhhcCC---C-eeeeec-----------------CCCCccceEE
Q 011823 121 RF-KLTLNKLYAWNLV-DYDRVVMLDSDNLFLEKTDELFQCG---Q-FCAVFI-----------------NPCIFHTGLF 177 (476)
Q Consensus 121 r~-~~ty~KL~i~~L~-eydRVLYLDaD~LVl~nLdeLFd~~---~-~~Aa~d-----------------~P~yFNSGVm 177 (476)
++ ..+|.|++++++. ++|||||||+|++|++|+++||+++ . ++|+.| ..+|||||||
T Consensus 78 ~~~~~~y~rl~l~~ll~~~~rvlylD~D~lv~~di~~L~~~~~~~~~~aa~~d~~~~~~~~~~~~~~~~~~~~yfNsGv~ 157 (248)
T cd04194 78 HISYATYYRLLIPDLLPDYDKVLYLDADIIVLGDLSELFDIDLGDNLLAAVRDPFIEQEKKRKRRLGGYDDGSYFNSGVL 157 (248)
T ss_pred cccHHHHHHHHHHHHhcccCEEEEEeCCEEecCCHHHHhcCCcCCCEEEEEecccHHHHHHHHhhcCCCcccceeeecch
Confidence 44 5899999999975 5999999999999999999999986 2 455543 1269999999
Q ss_pred EEeCCHHHHHH----HHHHHHhCCCCCCCCchhHHhcccCCCCCCCccCCCCCCCCCCCceeCCccccccchhcccccc-
Q 011823 178 VLQPSETVFKD----MIHELETGRENPDGADQGFIASYFPDLLDKPMFHPSLNGTKLEGHYRLPLGYQMDASYYYLRLR- 252 (476)
Q Consensus 178 vInps~~~f~~----lle~l~~~~~~~~~~DQDiLN~~f~d~~~~~lf~p~~~~~~ld~~~rLp~~YN~~~~~~yl~~~- 252 (476)
++|++.++.++ +++.+.+....+.++|||+||.+|.+ .+..||.+||++.+.+.....
T Consensus 158 l~nl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~~~~-----------------~~~~L~~~~N~~~~~~~~~~~~ 220 (248)
T cd04194 158 LINLKKWREENITEKLLELIKEYGGRLIYPDQDILNAVLKD-----------------KILYLPPRYNFQTGFYYLLKKK 220 (248)
T ss_pred heeHHHHHHhhhHHHHHHHHHhCCCceeeCChHHHHHHHhC-----------------CeEEcCcccccchhHhHHhhcc
Confidence 99999776554 44555554455778999999999997 589999999999875432210
Q ss_pred ------cCCCCCCCeEEEeeCCCCCCCCc
Q 011823 253 ------WSVPCGPNSVITFPGAPWLKPWY 275 (476)
Q Consensus 253 ------w~~~~~~~~IIHFtg~p~~KPW~ 275 (476)
.....++++||||+|. .|||+
T Consensus 221 ~~~~~~~~~~~~~~~iiHf~g~--~KPW~ 247 (248)
T cd04194 221 SKEEQELEEARKNPVIIHYTGS--DKPWN 247 (248)
T ss_pred chhHHHHHHHhcCCEEEEeCCC--CCCCC
Confidence 0112457899999998 79997
No 7
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=99.97 E-value=2.3e-30 Score=248.17 Aligned_cols=202 Identities=25% Similarity=0.384 Sum_probs=137.6
Q ss_pred cchHHHHHHHHHHHHhCCC-CcEEE-EEcCCCCHHHHHHHHhhCCCEEEEE---eccCCcc----cccccccchh-hhhh
Q 011823 57 EFYVATRVMIRSLVRLHVD-ADIVV-IASLDVPLRWVQALEQEDGAKVVRV---ENLNNPY----KDQANFDRRF-KLTL 126 (476)
Q Consensus 57 eyl~ga~VL~~SL~~~ns~-~dlvV-lvt~~Is~e~~~~L~~~~g~~v~~V---~~i~~p~----~~~~~~~~r~-~~ty 126 (476)
+|+.+++|+++||++++++ .++.+ +++++++++.+++|++ .+.++..+ ...+... ........++ ..++
T Consensus 9 ~y~~~~~v~i~Sl~~~~~~~~~~~i~i~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (250)
T PF01501_consen 9 NYLEGAAVLIKSLLKNNPDPSNLHIYIITDDISEEDFEKLRA-LAAEVIEIEPIEFPDISMLEEFQFNSPSKRHFSPATF 87 (250)
T ss_dssp GGHHHHHHHHHHHHHTTTT-SSEEEEEEESSS-HHHHHHHHH-HSCCCCTTECEEETSGGHHH--TTS-HCCTCGGGGGG
T ss_pred HHHHHHHHHHHHHHHhccccccceEEEecCCCCHHHHHHHhh-hcccccceeeeccchHHhhhhhhhcccccccccHHHH
Confidence 5699999999999999886 56544 4688999999999988 44433222 2111110 0001112233 6899
Q ss_pred Hhhhhhhc-cCcCeEEEEcCCeecccCchhhhcCC---C-eeeeec--------------------CCCCccceEEEEeC
Q 011823 127 NKLYAWNL-VDYDRVVMLDSDNLFLEKTDELFQCG---Q-FCAVFI--------------------NPCIFHTGLFVLQP 181 (476)
Q Consensus 127 ~KL~i~~L-~eydRVLYLDaD~LVl~nLdeLFd~~---~-~~Aa~d--------------------~P~yFNSGVmvInp 181 (476)
.|++++++ .+||||||||+|++|++|+++||+.+ . ++|+.+ .++|||||||++|+
T Consensus 88 ~rl~i~~ll~~~drilyLD~D~lv~~dl~~lf~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~fNsGv~l~~~ 167 (250)
T PF01501_consen 88 ARLFIPDLLPDYDRILYLDADTLVLGDLDELFDLDLQGKYLAAVEDESFDNFPNKRFPFSERKQPGNKPYFNSGVMLFNP 167 (250)
T ss_dssp GGGGHHHHSTTSSEEEEE-TTEEESS-SHHHHC---TTSSEEEEE----HHHHTSTTSSEEECESTTTTSEEEEEEEEEH
T ss_pred HHhhhHHHHhhcCeEEEEcCCeeeecChhhhhcccchhhhccccccchhhhhhhcccchhhcccCcccccccCcEEEEee
Confidence 99999998 99999999999999999999999965 2 445433 23799999999999
Q ss_pred CHHHHHHHHHHHH----hCCCCCCCCchhHHhcccCCCCCCCccCCCCCCCCCCCceeCCccccccchhc-ccccccCCC
Q 011823 182 SETVFKDMIHELE----TGRENPDGADQGFIASYFPDLLDKPMFHPSLNGTKLEGHYRLPLGYQMDASYY-YLRLRWSVP 256 (476)
Q Consensus 182 s~~~f~~lle~l~----~~~~~~~~~DQDiLN~~f~d~~~~~lf~p~~~~~~ld~~~rLp~~YN~~~~~~-yl~~~w~~~ 256 (476)
+.++.+++.+.+. ....+..++|||+||.+|.+ ++..||.+||.+...+ +....-...
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~DQ~~ln~~~~~-----------------~~~~L~~~~N~~~~~~~~~~~~~~~~ 230 (250)
T PF01501_consen 168 SKWRKENILQKLIEWLEQNGMKLGFPDQDILNIVFYG-----------------NIKPLPCRYNCQPSWYNQSDDYFNPI 230 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTT-SSCHHHHHHHHHTT-----------------GEEEEEGGGSEEHHHHHHTHHHHHHH
T ss_pred chhhhhhhhhhhhhhhhhcccccCcCchHHHhhhccc-----------------eeEEECchhccccccccccchhhHhh
Confidence 9888777766543 23335678999999999997 6899999999998655 100000012
Q ss_pred CCCCeEEEeeCCCCCCCCcccc
Q 011823 257 CGPNSVITFPGAPWLKPWYWWS 278 (476)
Q Consensus 257 ~~~~~IIHFtg~p~~KPW~~ws 278 (476)
.++++||||+|. .|||..++
T Consensus 231 ~~~~~iiHy~g~--~KPW~~~~ 250 (250)
T PF01501_consen 231 LEDAKIIHYSGP--PKPWKSTS 250 (250)
T ss_dssp GCC-SEEE--SS--S-TTSTT-
T ss_pred cCCeEEEEeCCC--CcCCCCCC
Confidence 357899999997 79999764
No 8
>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]
Probab=99.96 E-value=2.2e-28 Score=249.09 Aligned_cols=226 Identities=21% Similarity=0.321 Sum_probs=165.9
Q ss_pred EEEeecCCCCccchHHHHHHHHHHHHhCC--CCcEEEEEcCCCCHHHHHHHHhh---CCCEEEEEeccC-Cccccccccc
Q 011823 46 TMMYMGTPRDYEFYVATRVMIRSLVRLHV--DADIVVIASLDVPLRWVQALEQE---DGAKVVRVENLN-NPYKDQANFD 119 (476)
Q Consensus 46 Tivy~~t~~dYeyl~ga~VL~~SL~~~ns--~~dlvVlvt~~Is~e~~~~L~~~---~g~~v~~V~~i~-~p~~~~~~~~ 119 (476)
.|+++ .|. .|+.|++|.+.|+..|+. .+.+++++ +++++|++++|++. .+..+.. ..++ ++........
T Consensus 4 ~Iv~a-~D~--nY~~~~gvsI~SiL~~n~~~~~~fhil~-~~i~~e~~~~l~~~~~~f~~~i~~-~~id~~~~~~~~~~~ 78 (325)
T COG1442 4 PIAFA-FDK--NYLIPAGVSIYSLLEHNRKIFYKFHILV-DGLNEEDKKKLNETAEPFKSFIVL-EVIDIEPFLDYPPFT 78 (325)
T ss_pred cEEEE-ccc--ccchhHHHHHHHHHHhCccccEEEEEEe-cCCCHHHHHHHHHHHHhhccceee-EEEechhhhcccccc
Confidence 46666 555 458999999999999998 56666665 78999999999885 4444321 1122 1221111135
Q ss_pred chh-hhhhHhhhhhhc-cCcCeEEEEcCCeecccCchhhhcCC----Ceeeeec------------------CCCCccce
Q 011823 120 RRF-KLTLNKLYAWNL-VDYDRVVMLDSDNLFLEKTDELFQCG----QFCAVFI------------------NPCIFHTG 175 (476)
Q Consensus 120 ~r~-~~ty~KL~i~~L-~eydRVLYLDaD~LVl~nLdeLFd~~----~~~Aa~d------------------~P~yFNSG 175 (476)
+|| ..+|.|+++.++ .++||+||+|+|++|.+++++||+.+ .++||.| ...|||||
T Consensus 79 ~~~s~~v~~R~fiadlf~~~dK~lylD~Dvi~~g~l~~lf~~~~~~~~~aaV~D~~~~~~~~~~~~~~~~~~~~~yFNaG 158 (325)
T COG1442 79 KRFSKMVLVRYFLADLFPQYDKMLYLDVDVIFCGDLSELFFIDLEEYYLAAVRDVFSHYMKEGALRLEKGDLEGSYFNAG 158 (325)
T ss_pred cchHHHHHHHHHHHHhccccCeEEEEecCEEEcCcHHHHHhcCCCcceEEEEeehhhhhhhhhhhHhhhcccccccCccc
Confidence 676 489999999997 77899999999999999999999986 2455543 12699999
Q ss_pred EEEEeCCHHHHHHHHHHH----HhCCCCCCCCchhHHhcccCCCCCCCccCCCCCCCCCCCceeCCccccccchhcc-cc
Q 011823 176 LFVLQPSETVFKDMIHEL----ETGRENPDGADQGFIASYFPDLLDKPMFHPSLNGTKLEGHYRLPLGYQMDASYYY-LR 250 (476)
Q Consensus 176 VmvInps~~~f~~lle~l----~~~~~~~~~~DQDiLN~~f~d~~~~~lf~p~~~~~~ld~~~rLp~~YN~~~~~~y-l~ 250 (476)
||++|.+.|+.+++.+.+ ....+.+..+|||+||..|.| .+..||.+||++....+ .+
T Consensus 159 ~llinl~~W~~~~i~~k~i~~~~~~~~~~~~~DQdiLN~i~~~-----------------~~~~L~~~YN~~~~~~~~~~ 221 (325)
T COG1442 159 VLLINLKLWREENIFEKLIELLKDKENDLLYPDQDILNMIFED-----------------RVLELPIRYNAIPYIDSQLK 221 (325)
T ss_pred eeeehHHHHHHhhhHHHHHHHHhccccccCCccccHHHHHHHh-----------------hhhccCcccceeehhhhccc
Confidence 999999988877766543 333456788999999999998 68999999999976433 22
Q ss_pred cccCCC-CCCCeEEEeeCCCCCCCCcccccCcccchhhhHHHHHHhc
Q 011823 251 LRWSVP-CGPNSVITFPGAPWLKPWYWWSWPVLPLGIEWHKHRLQTL 296 (476)
Q Consensus 251 ~~w~~~-~~~~~IIHFtg~p~~KPW~~ws~p~~~l~~~W~~~r~~t~ 296 (476)
.....+ ..++.|+||+|. .|||+-|+++... ...|++...++.
T Consensus 222 ~~~~~~~~~~~~iiHy~g~--~KPW~~~~~~~~~-~~~w~~i~~~~p 265 (325)
T COG1442 222 DKYIYPFGDDPVILHYAGP--TKPWHSDSSNYPR-SHEWHEILAETP 265 (325)
T ss_pred hhhhccCCCCceEEEecCC--CCCCcCccccccH-HHHHHHHHhcCC
Confidence 110122 345799999998 7999988754333 567888877663
No 9
>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=99.96 E-value=1.9e-28 Score=243.01 Aligned_cols=216 Identities=17% Similarity=0.215 Sum_probs=149.4
Q ss_pred EEEeecCCCCccchHHHHHHHHHHHHhCCC-CcEEEE-EcCCCCHHHHHHHHhh---CCCEE--EEEeccC---Cccc-c
Q 011823 46 TMMYMGTPRDYEFYVATRVMIRSLVRLHVD-ADIVVI-ASLDVPLRWVQALEQE---DGAKV--VRVENLN---NPYK-D 114 (476)
Q Consensus 46 Tivy~~t~~dYeyl~ga~VL~~SL~~~ns~-~dlvVl-vt~~Is~e~~~~L~~~---~g~~v--~~V~~i~---~p~~-~ 114 (476)
+++++ +| || + +++|.+.|+..+|++ .+++++ ++++++.+.++++.+. .+.++ +.++... .... .
T Consensus 2 hiv~~-~D-n~--l-~~~v~i~S~l~nn~~~~~~~fhvvtd~~s~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~ 76 (257)
T cd06429 2 HVVIF-SD-NR--L-AAAVVINSSISNNKDPSNLVFHIVTDNQNYGAMRSWFDLNPLKIATVKVLNFDDFKLLGKVKVDS 76 (257)
T ss_pred CEEEE-ec-ch--h-HHHHHHHHHHHhCCCCCceEEEEecCccCHHHHHHHHHhcCCCCceEEEEEeCcHHhhcccccch
Confidence 56776 55 44 4 666667777777766 787775 5899998888887663 24444 3332110 0000 0
Q ss_pred -------------cccccchh-hhhhHhhhhhhc-cCcCeEEEEcCCeecccCchhhhcCC---Cee-eeecCCCCccce
Q 011823 115 -------------QANFDRRF-KLTLNKLYAWNL-VDYDRVVMLDSDNLFLEKTDELFQCG---QFC-AVFINPCIFHTG 175 (476)
Q Consensus 115 -------------~~~~~~r~-~~ty~KL~i~~L-~eydRVLYLDaD~LVl~nLdeLFd~~---~~~-Aa~d~P~yFNSG 175 (476)
+....+++ ..+|.|+.++++ .+++||||||||++|.+||+|||+++ ..+ |+.| |||||
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~s~~~y~Rl~ip~llp~~~kvlYLD~Dviv~~dl~eL~~~dl~~~~~aav~d---yfNsG 153 (257)
T cd06429 77 LMQLESEADTSNLKQRKPEYISLLNFARFYLPELFPKLEKVIYLDDDVVVQKDLTELWNTDLGGGVAGAVET---SWNPG 153 (257)
T ss_pred hhhhhccccccccccCCccccCHHHHHHHHHHHHhhhhCeEEEEeCCEEEeCCHHHHhhCCCCCCEEEEEhh---hcccc
Confidence 00011233 489999999996 57999999999999999999999986 344 4433 99999
Q ss_pred EEEEeCCHHHHHHHHHH----HHhCCC---C-CCCCchhHHhcccCCCCCCCccCCCCCCCCCCCceeCCccccccc-hh
Q 011823 176 LFVLQPSETVFKDMIHE----LETGRE---N-PDGADQGFIASYFPDLLDKPMFHPSLNGTKLEGHYRLPLGYQMDA-SY 246 (476)
Q Consensus 176 VmvInps~~~f~~lle~----l~~~~~---~-~~~~DQDiLN~~f~d~~~~~lf~p~~~~~~ld~~~rLp~~YN~~~-~~ 246 (476)
||++|+++++.+++.+. +....+ . .+.+|||+||..|.+ .+..||.+||.+. ++
T Consensus 154 V~linl~~wr~~~i~~~~~~~~~~~~~~~~~~~~~~dqd~ln~~~~~-----------------~~~~L~~~wN~~~l~~ 216 (257)
T cd06429 154 VNVVNLTEWRRQNVTETYEKWMELNQEEEVTLWKLITLPPGLIVFYG-----------------LTSPLDPSWHVRGLGY 216 (257)
T ss_pred eEEEeHHHHHhccHHHHHHHHHHHhhhcccchhhcCCccHHHHHccC-----------------eeEECChHHcccCCcc
Confidence 99999998877666443 332222 1 467899999999998 6899999999873 22
Q ss_pred cccccccCCCCCCCeEEEeeCCCCCCCCcccccCcccchhhhHHHH
Q 011823 247 YYLRLRWSVPCGPNSVITFPGAPWLKPWYWWSWPVLPLGIEWHKHR 292 (476)
Q Consensus 247 ~yl~~~w~~~~~~~~IIHFtg~p~~KPW~~ws~p~~~l~~~W~~~r 292 (476)
.+.. + ....++++||||+|. .|||+.++ ..+.+..|..|.
T Consensus 217 ~~~~-~-~~~~~~~~IIHy~G~--~KPW~~~~--~~~~~~~w~~yl 256 (257)
T cd06429 217 NYGI-R-PQDIKAAAVLHFNGN--MKPWLRTA--IPSYKELWEKYL 256 (257)
T ss_pred cccc-c-ccccCCcEEEEECCC--CCCcCCCC--CChHHHHHHHHh
Confidence 1111 1 122457899999998 89999876 567778887763
No 10
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=99.96 E-value=5e-28 Score=242.80 Aligned_cols=218 Identities=17% Similarity=0.132 Sum_probs=151.5
Q ss_pred cchHHHHHHHHHHHHhCCCCcEEEE-EcCCCCHHHHHHHHhh---CCCEEEEEec--cCCcccccccccchhh--hhhHh
Q 011823 57 EFYVATRVMIRSLVRLHVDADIVVI-ASLDVPLRWVQALEQE---DGAKVVRVEN--LNNPYKDQANFDRRFK--LTLNK 128 (476)
Q Consensus 57 eyl~ga~VL~~SL~~~ns~~dlvVl-vt~~Is~e~~~~L~~~---~g~~v~~V~~--i~~p~~~~~~~~~r~~--~ty~K 128 (476)
.|..++.|+++|+.+++ +.++.++ ++++++++++++|.+. .++++..++. ...... .....++. .+|.|
T Consensus 11 ~y~~~~~~~i~Sil~n~-~~~~~fhii~d~~s~~~~~~l~~~~~~~~~~i~f~~i~~~~~~~~--~~~~~~~s~~y~y~R 87 (280)
T cd06431 11 NASRDVVTLVKSVLFYR-RNPLHFHLITDEIARRILATLFQTWMVPAVEVSFYNAEELKSRVS--WIPNKHYSGIYGLMK 87 (280)
T ss_pred CcHHHHHHHHHHHHHcC-CCCEEEEEEECCcCHHHHHHHHHhccccCcEEEEEEhHHhhhhhc--cCcccchhhHHHHHH
Confidence 45788999999999986 4555553 4788999999988763 3555543331 111110 00123443 36799
Q ss_pred hhhhhcc--CcCeEEEEcCCeecccCchhhhcC-----C-Ceeee-ec-------------C--C---CCccceEEEEeC
Q 011823 129 LYAWNLV--DYDRVVMLDSDNLFLEKTDELFQC-----G-QFCAV-FI-------------N--P---CIFHTGLFVLQP 181 (476)
Q Consensus 129 L~i~~L~--eydRVLYLDaD~LVl~nLdeLFd~-----~-~~~Aa-~d-------------~--P---~yFNSGVmvInp 181 (476)
|.++++. ++|||||||||++|.+||+|||+. + .++|+ .+ . + .|||||||++|.
T Consensus 88 L~ip~llp~~~dkvLYLD~Diiv~~di~eL~~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~yFNsGVmlinL 167 (280)
T cd06431 88 LVLTEALPSDLEKVIVLDTDITFATDIAELWKIFHKFTGQQVLGLVENQSDWYLGNLWKNHRPWPALGRGFNTGVILLDL 167 (280)
T ss_pred HHHHHhchhhcCEEEEEcCCEEEcCCHHHHHHHhhhcCCCcEEEEeccchhhhhhhhhhccCCCcccccceeeeeeeeeH
Confidence 9999963 599999999999999999999987 2 24443 21 1 1 499999999999
Q ss_pred CHHHHHHHHHHHH----hC---CCCCCCCchhHHhcccCCCCCCCccCCCCCCCCCCCceeCCccccccchhcccc-ccc
Q 011823 182 SETVFKDMIHELE----TG---RENPDGADQGFIASYFPDLLDKPMFHPSLNGTKLEGHYRLPLGYQMDASYYYLR-LRW 253 (476)
Q Consensus 182 s~~~f~~lle~l~----~~---~~~~~~~DQDiLN~~f~d~~~~~lf~p~~~~~~ld~~~rLp~~YN~~~~~~yl~-~~w 253 (476)
++++.+++.+.+. +. .++..++|||+||.++.+ ++ +-+..||.+||.+.+..... ...
T Consensus 168 ~~wR~~~~~~~~~~~~~~~~~~~~~~~~~DQDiLN~v~~~---~~-----------~~~~~L~~~wN~~~~~~~~~~~~~ 233 (280)
T cd06431 168 DKLRKMKWESMWRLTAERELMSMLSTSLADQDIFNAVIKQ---NP-----------FLVYQLPCAWNVQLSDHTRSEQCY 233 (280)
T ss_pred HHHHhhCHHHHHHHHHHHHHhhcCCCCcCcHHHHHHHHcC---Cc-----------ceeEECCCccccccCccchHhHhh
Confidence 9888777665542 11 234578999999999987 10 01688999999987533211 111
Q ss_pred CCCCCCCeEEEeeCCCCCCCCcccccCcccchhhhHHHHHHh
Q 011823 254 SVPCGPNSVITFPGAPWLKPWYWWSWPVLPLGIEWHKHRLQT 295 (476)
Q Consensus 254 ~~~~~~~~IIHFtg~p~~KPW~~ws~p~~~l~~~W~~~r~~t 295 (476)
. ..++++||||+|. .|||...+. ..+++..|..+...+
T Consensus 234 ~-~~~~p~IIHf~g~--~KPW~~~~~-~~~~~~~~~~~~~~~ 271 (280)
T cd06431 234 R-DVSDLKVIHWNSP--KKLRVKNKH-VEFFRNLYLTFLEYD 271 (280)
T ss_pred c-CcCCCEEEEeCCC--CCCCCcCCC-ChHHHHHHHHHHhcC
Confidence 1 2356799999998 899997542 588999999988655
No 11
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=99.91 E-value=1.6e-23 Score=206.76 Aligned_cols=191 Identities=13% Similarity=0.103 Sum_probs=132.6
Q ss_pred cchHHHHHHHHHHHHhCCCCcEEEE-EcCCCCHHHHHHHHhh---CCCEEEEEeccCCcc-cccccccchhhhhhHhhhh
Q 011823 57 EFYVATRVMIRSLVRLHVDADIVVI-ASLDVPLRWVQALEQE---DGAKVVRVENLNNPY-KDQANFDRRFKLTLNKLYA 131 (476)
Q Consensus 57 eyl~ga~VL~~SL~~~ns~~dlvVl-vt~~Is~e~~~~L~~~---~g~~v~~V~~i~~p~-~~~~~~~~r~~~ty~KL~i 131 (476)
.|..+++|++.||.+|+ +.++.++ .++++|++++++|++. .|.++..++ ++.+. ........+...+|.||.+
T Consensus 11 ~y~~~~~v~l~Sll~nn-~~~~~fyil~~~is~e~~~~l~~~~~~~~~~i~~i~-i~~~~~~~~~~~~~~~~~~y~rL~~ 88 (248)
T cd06432 11 LYERFLRIMMLSVMKNT-KSPVKFWFIKNFLSPQFKEFLPEMAKEYGFEYELVT-YKWPRWLHKQTEKQRIIWGYKILFL 88 (248)
T ss_pred HHHHHHHHHHHHHHHcC-CCCEEEEEEeCCCCHHHHHHHHHHHHHhCCceEEEE-ecChhhhhcccccchhHHHHHHHHH
Confidence 45788999999999987 3455543 3579999999988774 466554333 22111 1101111222356888888
Q ss_pred hhc-c-CcCeEEEEcCCeecccCchhhhcCC---Cee-eeec-----------------C------CCCccceEEEEeCC
Q 011823 132 WNL-V-DYDRVVMLDSDNLFLEKTDELFQCG---QFC-AVFI-----------------N------PCIFHTGLFVLQPS 182 (476)
Q Consensus 132 ~~L-~-eydRVLYLDaD~LVl~nLdeLFd~~---~~~-Aa~d-----------------~------P~yFNSGVmvInps 182 (476)
.++ . ++|||||||+|++|.+||++||+++ .++ |+.+ + ..|||||||+||.+
T Consensus 89 ~~lLP~~vdkvLYLD~Dilv~~dL~eL~~~dl~~~~~Aav~d~~~~~~~~~~~~~~~~~~~~~l~~~~YfNSGVmliNL~ 168 (248)
T cd06432 89 DVLFPLNVDKVIFVDADQIVRTDLKELMDMDLKGAPYGYTPFCDSRKEMDGFRFWKQGYWKSHLRGRPYHISALYVVDLK 168 (248)
T ss_pred HHhhhhccCEEEEEcCCceecccHHHHHhcCcCCCeEEEeeccccchhcccchhhhhhhhhhhcCCCCccceeeEEEeHH
Confidence 764 4 6999999999999999999999986 343 4422 0 13999999999999
Q ss_pred HHHHHHHHHHH-------HhCCCCCCCCchhHHhcccCCCCCCCccCCCCCCCCCCCceeCCccccccchhcccccccCC
Q 011823 183 ETVFKDMIHEL-------ETGRENPDGADQGFIASYFPDLLDKPMFHPSLNGTKLEGHYRLPLGYQMDASYYYLRLRWSV 255 (476)
Q Consensus 183 ~~~f~~lle~l-------~~~~~~~~~~DQDiLN~~f~d~~~~~lf~p~~~~~~ld~~~rLp~~YN~~~~~~yl~~~w~~ 255 (476)
+++.+++.+.+ ..++.++.++|||+||.++.+. .++.||.+||+....- +++
T Consensus 169 ~wR~~~i~~~~~~~~~~l~~~~~~l~~~DQDiLN~v~~~~----------------~i~~Lp~~w~~~~~~~-----~~~ 227 (248)
T cd06432 169 RFRRIAAGDRLRGQYQQLSQDPNSLANLDQDLPNNMQHQV----------------PIFSLPQEWLWCETWC-----SDE 227 (248)
T ss_pred HHHHHhHHHHHHHHHHHHhcCCCccccCCchhhHHHhccC----------------CeEECChHHHHHHHHh-----ccc
Confidence 98877766522 2334457889999999999871 3899999999874321 122
Q ss_pred CCCCCeEEEeeCCCC
Q 011823 256 PCGPNSVITFPGAPW 270 (476)
Q Consensus 256 ~~~~~~IIHFtg~p~ 270 (476)
..+.+.+|||+..|.
T Consensus 228 ~~~~~~~~~~~~~~~ 242 (248)
T cd06432 228 SKKKAKTIDLCNNPL 242 (248)
T ss_pred ccCccceeecccCCC
Confidence 335679999998753
No 12
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=99.89 E-value=2.2e-22 Score=203.26 Aligned_cols=202 Identities=16% Similarity=0.219 Sum_probs=135.1
Q ss_pred EEEEeecCCCCccchHHHHHHHHHHHHhCCCCcEEE--EEcCCCCHHHHHHHHhh--CCCEEE--EEeccCCcccccccc
Q 011823 45 ATMMYMGTPRDYEFYVATRVMIRSLVRLHVDADIVV--IASLDVPLRWVQALEQE--DGAKVV--RVENLNNPYKDQANF 118 (476)
Q Consensus 45 vTivy~~t~~dYeyl~ga~VL~~SL~~~ns~~dlvV--lvt~~Is~e~~~~L~~~--~g~~v~--~V~~i~~p~~~~~~~ 118 (476)
++++..| | .+..+.++++|+..+| +.++.+ +.++..+++.+++|++. .+.+.+ .+..+..|.......
T Consensus 3 ~~vv~~g---~--~~~~~~~~lkSil~~n-~~~l~Fhi~~d~~~~~~~~~~l~~~~~~~~~~i~~~i~~I~~P~~~~~~w 76 (304)
T cd06430 3 LAVVACG---E--RLEETLTMLKSAIVFS-QKPLRFHIFAEDQLKQSFKEKLDDWPELIDRKFNYTLHPITFPSGNAAEW 76 (304)
T ss_pred EEEEEcC---C--cHHHHHHHHHHHHHhC-CCCEEEEEEECCccCHHHHHHHHHHHHhccceeeeEEEEEecCccchhhh
Confidence 5667554 2 2577999999998877 455544 44445888888878874 222222 333333333211111
Q ss_pred cchhh-hhhHhhhhhhc-cCcCeEEEEcCCeecccCchhhhcC--C----Ceeee-ec--------------CC----CC
Q 011823 119 DRRFK-LTLNKLYAWNL-VDYDRVVMLDSDNLFLEKTDELFQC--G----QFCAV-FI--------------NP----CI 171 (476)
Q Consensus 119 ~~r~~-~ty~KL~i~~L-~eydRVLYLDaD~LVl~nLdeLFd~--~----~~~Aa-~d--------------~P----~y 171 (476)
.+.++ .+|.||.++++ .++|||||||+|++|.+||+|||+. + +++|+ ++ +| .+
T Consensus 77 s~l~~~~~y~RL~ip~lLp~~dkvLYLD~Dii~~~dI~eL~~~~~df~~~~~aA~v~e~~~~~~~~~~~~~~~~~~~~~g 156 (304)
T cd06430 77 KKLFKPCAAQRLFLPSLLPDVDSLLYVDTDILFLRPVEEIWSFLKKFNSTQLAAMAPEHEEPNIGWYNRFARHPYYGKTG 156 (304)
T ss_pred hhcccHHHHHHHHHHHHhhhhceEEEeccceeecCCHHHHHHHHhhcCCCeEEEEEecccccchhhhhhhcccCcccccc
Confidence 12233 78999999995 6789999999999999999999987 3 35554 22 11 35
Q ss_pred ccceEEEEeCCHHHH---------------HHHHHHHHhCCCCCCCCchhHHhcccCCCCCCCccCCCCCCCCCCCceeC
Q 011823 172 FHTGLFVLQPSETVF---------------KDMIHELETGRENPDGADQGFIASYFPDLLDKPMFHPSLNGTKLEGHYRL 236 (476)
Q Consensus 172 FNSGVmvInps~~~f---------------~~lle~l~~~~~~~~~~DQDiLN~~f~d~~~~~lf~p~~~~~~ld~~~rL 236 (476)
||||||++|.++++. +++++.+.+.+.+..++|||+||..|.+ +| + .++.|
T Consensus 157 FNSGVmLmNL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~DQDiLN~v~~~---~p----~-------~~~~L 222 (304)
T cd06430 157 VNSGVMLMNLTRMRRKYFKNDMTPVGLRWEEILMPLYKKYKLKITWGDQDLINIIFHH---NP----E-------MLYVF 222 (304)
T ss_pred cccceeeeeHHHHHhhhcccccchhhhhHHHHHHHHHHhcccCCCCCCHHHHHHHHcC---CC----C-------eEEEc
Confidence 999999999988775 2344555555566788999999999997 21 1 37899
Q ss_pred Cccccccchh--cccccccCC-CCCCCeEEEeeCC
Q 011823 237 PLGYQMDASY--YYLRLRWSV-PCGPNSVITFPGA 268 (476)
Q Consensus 237 p~~YN~~~~~--~yl~~~w~~-~~~~~~IIHFtg~ 268 (476)
|.+||++..- |..+ ... +.+.++|||..++
T Consensus 223 p~~wN~~~d~~~y~~~--~~~~~~~~~~~~H~n~~ 255 (304)
T cd06430 223 PCHWNYRPDHCMYGSN--CKAAEEEGVFILHGNRG 255 (304)
T ss_pred CccccCCccceeeccc--ccccccccceEEEcCCC
Confidence 9999987632 1111 111 2346799999876
No 13
>PLN02718 Probable galacturonosyltransferase
Probab=99.86 E-value=1.1e-21 Score=210.75 Aligned_cols=225 Identities=15% Similarity=0.211 Sum_probs=154.1
Q ss_pred CCeEEEEEEeecCCCCccchHHHHHHHHHHHHh-CCCCcEEEE-EcCCCCHHHHHHHHhh---CCCEE--EEEeccCC-c
Q 011823 40 HKNAYATMMYMGTPRDYEFYVATRVMIRSLVRL-HVDADIVVI-ASLDVPLRWVQALEQE---DGAKV--VRVENLNN-P 111 (476)
Q Consensus 40 ~~~AYvTivy~~t~~dYeyl~ga~VL~~SL~~~-ns~~dlvVl-vt~~Is~e~~~~L~~~---~g~~v--~~V~~i~~-p 111 (476)
..-.+.++++. +|+ | .++.|++.|+..| +.+.+++++ ++++++.+.++.+... .+.++ +.++.... |
T Consensus 309 ~d~~~~Hia~~-sDN---v-laasVvInSil~Ns~np~~ivFHVvTD~is~~~mk~wf~l~~~~~a~I~V~~Iddf~~lp 383 (603)
T PLN02718 309 NDPDLYHYVVF-SDN---V-LACSVVVNSTISSSKEPEKIVFHVVTDSLNYPAISMWFLLNPPGKATIQILNIDDMNVLP 383 (603)
T ss_pred cCCcceeEEEE-cCC---c-eeEEEEhhhhhhccCCCCcEEEEEEeCCCCHHHHHHHHHhCCCCCcEEEEEecchhcccc
Confidence 34467888887 332 3 5888999999887 333467775 5899999988877653 23443 33332110 1
Q ss_pred --c---cccc-ccc-chh-hhhhHhhhhhhc-cCcCeEEEEcCCeecccCchhhhcCC---Cee-eeec-----------
Q 011823 112 --Y---KDQA-NFD-RRF-KLTLNKLYAWNL-VDYDRVVMLDSDNLFLEKTDELFQCG---QFC-AVFI----------- 167 (476)
Q Consensus 112 --~---~~~~-~~~-~r~-~~ty~KL~i~~L-~eydRVLYLDaD~LVl~nLdeLFd~~---~~~-Aa~d----------- 167 (476)
+ .... ... +++ ..+|.|++++++ .+++||||||+|+||.+||++||+++ ..+ |+.+
T Consensus 384 ~~~~~~lk~l~s~~~~~~S~~~y~Rl~ipellp~l~KvLYLD~DvVV~~DL~eL~~iDl~~~v~aaVedC~~~~~~~~~~ 463 (603)
T PLN02718 384 ADYNSLLMKQNSHDPRYISALNHARFYLPDIFPGLNKIVLFDHDVVVQRDLSRLWSLDMKGKVVGAVETCLEGEPSFRSM 463 (603)
T ss_pred ccchhhhhhccccccccccHHHHHHHHHHHHhcccCEEEEEECCEEecCCHHHHhcCCCCCcEEEEeccccccccchhhh
Confidence 0 0000 011 223 479999999996 57999999999999999999999986 233 2221
Q ss_pred -----------------CCCCccceEEEEeCCHHHHHHHHHHH----HhCCCCCCCCchhHHh---cccCCCCCCCccCC
Q 011823 168 -----------------NPCIFHTGLFVLQPSETVFKDMIHEL----ETGRENPDGADQGFIA---SYFPDLLDKPMFHP 223 (476)
Q Consensus 168 -----------------~P~yFNSGVmvInps~~~f~~lle~l----~~~~~~~~~~DQDiLN---~~f~d~~~~~lf~p 223 (476)
+.||||+||||||.++|+.+++.+.+ ..+.+ ....|||.|| ..|.|
T Consensus 464 ~~~lnfs~p~i~~~fn~~~CyfNsGVlLIDLk~WReenITe~~~~~l~~n~~-~~l~dqdaLpp~LlvF~g--------- 533 (603)
T PLN02718 464 DTFINFSDPWVAKKFDPKACTWAFGMNLFDLEEWRRQKLTSVYHKYLQLGVK-RPLWKAGSLPIGWLTFYN--------- 533 (603)
T ss_pred hhhhhccchhhhcccCCCccccccceEEEeHHHHHhcChHHHHHHHHHhccC-ccccCcccccHHHHHhcC---------
Confidence 12789999999999999887776543 33322 2568999998 78887
Q ss_pred CCCCCCCCCceeCCccccccchhcccccccCCCCCCCeEEEeeCCCCCCCCcccccCcccchhhhHHHH
Q 011823 224 SLNGTKLEGHYRLPLGYQMDASYYYLRLRWSVPCGPNSVITFPGAPWLKPWYWWSWPVLPLGIEWHKHR 292 (476)
Q Consensus 224 ~~~~~~ld~~~rLp~~YN~~~~~~yl~~~w~~~~~~~~IIHFtg~p~~KPW~~ws~p~~~l~~~W~~~r 292 (476)
.++.||.+||...- .+.........++++||||+|. .|||...+ ...+..+|..|-
T Consensus 534 --------ri~~LD~rWNv~gL-G~~~~i~~~~i~~aaIIHYnG~--~KPWle~~--i~~yr~~W~k~v 589 (603)
T PLN02718 534 --------QTVALDKRWHVLGL-GHESGVGASDIEQAAVIHYDGV--MKPWLDIG--IGKYKRYWNIHV 589 (603)
T ss_pred --------ceeecChHHhccCc-cccccccccccCCCEEEEECCC--CCccccCC--hhhHHHHHHhhc
Confidence 58999999997652 2211111123467799999998 89999876 566788888764
No 14
>PLN02523 galacturonosyltransferase
Probab=99.86 E-value=2.5e-21 Score=205.88 Aligned_cols=212 Identities=20% Similarity=0.233 Sum_probs=147.1
Q ss_pred hHHHHHHHHHHHHh-CCCCcEEEE-EcCCCCHHHHHHHHhh--C-CCEE--EEEeccC--C----ccccc--c-------
Q 011823 59 YVATRVMIRSLVRL-HVDADIVVI-ASLDVPLRWVQALEQE--D-GAKV--VRVENLN--N----PYKDQ--A------- 116 (476)
Q Consensus 59 l~ga~VL~~SL~~~-ns~~dlvVl-vt~~Is~e~~~~L~~~--~-g~~v--~~V~~i~--~----p~~~~--~------- 116 (476)
++++.|.+.|+..| +++.+++++ +||+++...++.+-.. . +.++ ..|+..+ + |..+. .
T Consensus 258 vlAAsVvInStv~Ns~~p~~~VFHIVTD~ln~~amk~Wf~~n~~~~a~I~V~~Iedf~~ln~~~~pvlk~l~s~~~~~~~ 337 (559)
T PLN02523 258 VIAASVVVNSAVKNAKEPWKHVFHVVTDRMNLAAMKVMFKMRDLNGAHVEVKAVEDYKFLNSSYVPVLRQLESANLQKFY 337 (559)
T ss_pred chhhhhhHHHHHHccCCCcceEEEEEeCCCCHHHHHHHHhhCCCCCcEEEEEEeehhhhcccccchHHHhhhhhhhhhhh
Confidence 78899999999887 666777775 6999998777766442 2 3333 4444311 1 11000 0
Q ss_pred ---------------cc--cchh-hhhhHhhhhhhc-cCcCeEEEEcCCeecccCchhhhcCC---Ce-eeeec------
Q 011823 117 ---------------NF--DRRF-KLTLNKLYAWNL-VDYDRVVMLDSDNLFLEKTDELFQCG---QF-CAVFI------ 167 (476)
Q Consensus 117 ---------------~~--~~r~-~~ty~KL~i~~L-~eydRVLYLDaD~LVl~nLdeLFd~~---~~-~Aa~d------ 167 (476)
.. .+.+ ..+|.|++++++ .++|||||||+|+||.+||++||++| .. +|+.+
T Consensus 338 f~~~~~~~~~~~~~~k~~~p~ylS~~ny~Rf~IPeLLP~ldKVLYLD~DVVVq~DLseLw~iDL~gkv~aAVeDc~~~~~ 417 (559)
T PLN02523 338 FENKLENATKDSSNMKFRNPKYLSMLNHLRFYLPEMYPKLHRILFLDDDVVVQKDLTGLWKIDMDGKVNGAVETCFGSFH 417 (559)
T ss_pred ccccccccccccccccccCcchhhHHHHHHHHHHHHhcccCeEEEEeCCEEecCCHHHHHhCcCCCceEEEehhhhhHHH
Confidence 00 0112 478999999997 67999999999999999999999986 33 33322
Q ss_pred ---------CC----------CCccceEEEEeCCHHHHHHHHHHHH---hCCCCCCCCchhHHh---cccCCCCCCCccC
Q 011823 168 ---------NP----------CIFHTGLFVLQPSETVFKDMIHELE---TGRENPDGADQGFIA---SYFPDLLDKPMFH 222 (476)
Q Consensus 168 ---------~P----------~yFNSGVmvInps~~~f~~lle~l~---~~~~~~~~~DQDiLN---~~f~d~~~~~lf~ 222 (476)
+| |+||+|||+||.++|+.+++.+.+. ...++....|||.|| ..|.|
T Consensus 418 r~~~~ln~s~p~i~~yFNs~aC~wnsGVmlINL~~WRe~nITek~~~w~~ln~~~~l~DqdaLpp~LivF~g-------- 489 (559)
T PLN02523 418 RYAQYLNFSHPLIKEKFNPKACAWAYGMNIFDLDAWRREKCTEQYHYWQNLNENRTLWKLGTLPPGLITFYS-------- 489 (559)
T ss_pred HHHHhhcccchhhhhCcCCCcccccCCcEEEeHHHHHHhchHHHHHHHHHhccccccccccccchHHHHhcC--------
Confidence 11 4444599999999999888877653 223445679999996 67887
Q ss_pred CCCCCCCCCCceeCCccccccchhcccccccCCCCCCCeEEEeeCCCCCCCCcccccCcccchhhhHHHH
Q 011823 223 PSLNGTKLEGHYRLPLGYQMDASYYYLRLRWSVPCGPNSVITFPGAPWLKPWYWWSWPVLPLGIEWHKHR 292 (476)
Q Consensus 223 p~~~~~~ld~~~rLp~~YN~~~~~~yl~~~w~~~~~~~~IIHFtg~p~~KPW~~ws~p~~~l~~~W~~~r 292 (476)
.++.|+.+||...-. |.+.......++++||||+|. .|||..++ ..++...|..|.
T Consensus 490 ---------ri~~LD~rWNvlglG-y~~~i~~~~i~~paIIHYnG~--~KPWle~~--i~~yr~~W~kYl 545 (559)
T PLN02523 490 ---------TTKPLDKSWHVLGLG-YNPSISMDEIRNAAVIHFNGN--MKPWLDIA--MNQFKPLWTKYV 545 (559)
T ss_pred ---------ceEecCchhhccCCc-cCCCccccccCCCEEEEECCC--CCccccCC--CCcchHHHHHHH
Confidence 589999999976422 211111223467899999998 89998655 567788898886
No 15
>PLN02867 Probable galacturonosyltransferase
Probab=99.85 E-value=2.2e-21 Score=206.41 Aligned_cols=147 Identities=17% Similarity=0.231 Sum_probs=113.3
Q ss_pred hhhHhhhhhhc-cCcCeEEEEcCCeecccCchhhhcCC---C-eeeeec-----------------C-------------
Q 011823 124 LTLNKLYAWNL-VDYDRVVMLDSDNLFLEKTDELFQCG---Q-FCAVFI-----------------N------------- 168 (476)
Q Consensus 124 ~ty~KL~i~~L-~eydRVLYLDaD~LVl~nLdeLFd~~---~-~~Aa~d-----------------~------------- 168 (476)
.+|.|++++++ .+++||||||+|+||.+||++||++| . ++|+.| +
T Consensus 331 lnYlRflIPeLLP~LdKVLYLD~DVVVqgDLseLwdiDL~gkviaAV~D~~c~~~~~~~~~~~~YlNfsnp~i~~~~~p~ 410 (535)
T PLN02867 331 LNHLRIYIPELFPDLNKIVFLDDDVVVQHDLSSLWELDLNGKVVGAVVDSWCGDNCCPGRKYKDYLNFSHPLISSNLDQE 410 (535)
T ss_pred HHHHHHHHHHHhhccCeEEEecCCEEEcCchHHHHhCcCCCCeEEEEeccccccccccchhhhhhccccchhhhccCCCC
Confidence 78999999996 67999999999999999999999996 2 455532 0
Q ss_pred CCCccceEEEEeCCHHHHHHHHHHH----HhCC-CCCCCCchhHHhc---ccCCCCCCCccCCCCCCCCCCCceeCCccc
Q 011823 169 PCIFHTGLFVLQPSETVFKDMIHEL----ETGR-ENPDGADQGFIAS---YFPDLLDKPMFHPSLNGTKLEGHYRLPLGY 240 (476)
Q Consensus 169 P~yFNSGVmvInps~~~f~~lle~l----~~~~-~~~~~~DQDiLN~---~f~d~~~~~lf~p~~~~~~ld~~~rLp~~Y 240 (476)
.||||+|||+||.++|+.+++.+.+ .... ......|||.||. .|.| .+..||.+|
T Consensus 411 ~cYFNSGVmLINL~~WRe~nITek~~~~Le~n~~~~~~l~dqd~LN~~LlvF~g-----------------~v~~LD~rW 473 (535)
T PLN02867 411 RCAWLYGMNVFDLKAWRRTNITEAYHKWLKLSLNSGLQLWQPGALPPALLAFKG-----------------HVHPIDPSW 473 (535)
T ss_pred CcceecceeeeeHHHHHHhcHHHHHHHHHHhchhcccccccccccchHHHHhcC-----------------cEEECChhh
Confidence 2689999999999999888886653 3322 2346789999996 7877 699999999
Q ss_pred cccchhcccccc-cCCCCCCCeEEEeeCCCCCCCCcccccCcccchhhhHHHH
Q 011823 241 QMDASYYYLRLR-WSVPCGPNSVITFPGAPWLKPWYWWSWPVLPLGIEWHKHR 292 (476)
Q Consensus 241 N~~~~~~yl~~~-w~~~~~~~~IIHFtg~p~~KPW~~ws~p~~~l~~~W~~~r 292 (476)
|.. +..|.... .....++++||||+|. .|||+.++ ..++...|+.|-
T Consensus 474 Nv~-gLgy~~~~~~~~~i~~paIIHYnG~--~KPW~e~~--~~~yR~~W~kyl 521 (535)
T PLN02867 474 HVA-GLGSRPPEVPREILESAAVLHFSGP--AKPWLEIG--FPEVRSLWYRHV 521 (535)
T ss_pred ccc-CCCcccccchhhhcCCcEEEEECCC--CCcccccC--CCchhHHHHHhc
Confidence 984 33332211 1123467899999998 89999988 558899997764
No 16
>PLN02659 Probable galacturonosyltransferase
Probab=99.83 E-value=6.8e-21 Score=202.02 Aligned_cols=151 Identities=17% Similarity=0.183 Sum_probs=114.2
Q ss_pred hhhhHhhhhhhc-cCcCeEEEEcCCeecccCchhhhcCC---Ce-eeeec----------------------------C-
Q 011823 123 KLTLNKLYAWNL-VDYDRVVMLDSDNLFLEKTDELFQCG---QF-CAVFI----------------------------N- 168 (476)
Q Consensus 123 ~~ty~KL~i~~L-~eydRVLYLDaD~LVl~nLdeLFd~~---~~-~Aa~d----------------------------~- 168 (476)
..+|.||+++++ .++|||||||+|+||.+||++||++| .+ +|+.+ +
T Consensus 329 ~~nY~RL~IPeLLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkv~AAVeDc~~~d~~~~~~~~~~yL~~s~p~i~~yFn~ 408 (534)
T PLN02659 329 VMNHIRIHLPELFPSLNKVVFLDDDIVVQTDLSPLWDIDMNGKVNGAVETCRGEDKFVMSKKLKSYLNFSHPLIAKNFDP 408 (534)
T ss_pred HHHHHHHHHHHHhhhcCeEEEeeCCEEEcCchHHHHhCCCCCcEEEEeeccccccchhhhHHHHHhhcccchhhhhccCc
Confidence 378999999996 67999999999999999999999986 23 33322 1
Q ss_pred -CCCccceEEEEeCCHHHHHHHHHH----HHhCC-CCCCCCchhHH---hcccCCCCCCCccCCCCCCCCCCCceeCCcc
Q 011823 169 -PCIFHTGLFVLQPSETVFKDMIHE----LETGR-ENPDGADQGFI---ASYFPDLLDKPMFHPSLNGTKLEGHYRLPLG 239 (476)
Q Consensus 169 -P~yFNSGVmvInps~~~f~~lle~----l~~~~-~~~~~~DQDiL---N~~f~d~~~~~lf~p~~~~~~ld~~~rLp~~ 239 (476)
.||||+|||+||.++|+.+++.+. +.+.. +.....|||+| |..|.| .++.||.+
T Consensus 409 ~~cYfNsGVlLINLk~WRe~nITek~l~~l~~n~~~~l~l~DQdaLp~~LivF~g-----------------~v~~LD~r 471 (534)
T PLN02659 409 NECAWAYGMNIFDLEAWRKTNISSTYHHWLEENLKSDLSLWQLGTLPPGLIAFHG-----------------HVHVIDPF 471 (534)
T ss_pred cccceecceeEeeHHHHHhcChHHHHHHHHHhcccccccccccccchHHHHHhcC-----------------CEEECChh
Confidence 168999999999999887766554 33332 34567899999 577987 69999999
Q ss_pred ccccchhcccccccCCCCCCCeEEEeeCCCCCCCCcccccCcccchhhhHHHHHHh
Q 011823 240 YQMDASYYYLRLRWSVPCGPNSVITFPGAPWLKPWYWWSWPVLPLGIEWHKHRLQT 295 (476)
Q Consensus 240 YN~~~~~~yl~~~w~~~~~~~~IIHFtg~p~~KPW~~ws~p~~~l~~~W~~~r~~t 295 (476)
||.....+..+... ...++++||||+|. .|||+.|+ ..+....|..|-..+
T Consensus 472 WN~~gLg~~~~~~~-~~i~~paIIHYnG~--~KPW~~~~--~~~yr~~W~kYl~~s 522 (534)
T PLN02659 472 WHMLGLGYQENTSL-ADAESAGVVHFNGR--AKPWLDIA--FPQLRPLWAKYIDSS 522 (534)
T ss_pred heecCCcccccccc-cccCCcEEEEECCC--CCcccccc--CCcchhHHHHHhccC
Confidence 99853222111111 13467899999998 89999988 668899999987433
No 17
>PLN02870 Probable galacturonosyltransferase
Probab=99.83 E-value=6.1e-21 Score=202.35 Aligned_cols=151 Identities=19% Similarity=0.217 Sum_probs=113.4
Q ss_pred hhhhHhhhhhhc-cCcCeEEEEcCCeecccCchhhhcCC---Ce-eeeec------------------------------
Q 011823 123 KLTLNKLYAWNL-VDYDRVVMLDSDNLFLEKTDELFQCG---QF-CAVFI------------------------------ 167 (476)
Q Consensus 123 ~~ty~KL~i~~L-~eydRVLYLDaD~LVl~nLdeLFd~~---~~-~Aa~d------------------------------ 167 (476)
..+|.|++++++ .+.+||||||+|+||.+||++||++| .+ +|+.+
T Consensus 328 ~lny~Rl~LPelLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviaAVeDc~~~~~~~~~~~~~~YfNfs~p~i~~~fd~ 407 (533)
T PLN02870 328 LLNHLRIYLPELFPNLDKVVFLDDDVVIQRDLSPLWDIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKNLDP 407 (533)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEeCCEEecCcHHHHhhCCCCCceEEEEccccccchhhhhhhhhhhcccccchhhcccCc
Confidence 378999999996 67999999999999999999999986 33 33322
Q ss_pred CCCCccceEEEEeCCHHHHHHHHHHH----HhC-CCCCCCCchhHH---hcccCCCCCCCccCCCCCCCCCCCceeCCcc
Q 011823 168 NPCIFHTGLFVLQPSETVFKDMIHEL----ETG-RENPDGADQGFI---ASYFPDLLDKPMFHPSLNGTKLEGHYRLPLG 239 (476)
Q Consensus 168 ~P~yFNSGVmvInps~~~f~~lle~l----~~~-~~~~~~~DQDiL---N~~f~d~~~~~lf~p~~~~~~ld~~~rLp~~ 239 (476)
+.||||||||+||.++|+.+++.+.+ .++ .++....|||.| |..|.| .++.||.+
T Consensus 408 ~~cyfNSGVlLINL~~WRe~nITek~~~~l~~n~~~~l~l~DQdaLp~~livf~g-----------------~v~~LD~r 470 (533)
T PLN02870 408 EECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKG-----------------HVHPIDPS 470 (533)
T ss_pred ccceeeccchhccHHHHHHcChHHHHHHHHHhhhhcCceecccccccHhHHHhcC-----------------ceEECChH
Confidence 01578899999999998877766543 332 234678999999 578887 58999999
Q ss_pred ccccchhcccccccCCCCCCCeEEEeeCCCCCCCCcccccCcccchhhhHHHHHHh
Q 011823 240 YQMDASYYYLRLRWSVPCGPNSVITFPGAPWLKPWYWWSWPVLPLGIEWHKHRLQT 295 (476)
Q Consensus 240 YN~~~~~~yl~~~w~~~~~~~~IIHFtg~p~~KPW~~ws~p~~~l~~~W~~~r~~t 295 (476)
||... ..|....-....++++||||+|. .|||+.+. ..+....|..|-..+
T Consensus 471 WN~~g-Lgy~~~~~~~~i~~aaIIHY~G~--~KPW~~~~--~~~yr~~W~kYl~~s 521 (533)
T PLN02870 471 WHMLG-LGYQSKTNIESVKKAAVIHYNGQ--SKPWLEIG--FEHLRPFWTKYVNYS 521 (533)
T ss_pred HhcCC-CCCcccccccccCCcEEEEECCC--CCCccccC--ccchhHHHHHHHccC
Confidence 99853 22222111123456899999998 89999877 566888899886433
No 18
>PLN02769 Probable galacturonosyltransferase
Probab=99.81 E-value=9.8e-20 Score=196.52 Aligned_cols=148 Identities=18% Similarity=0.216 Sum_probs=111.9
Q ss_pred hhhhHhhhhhhc-cCcCeEEEEcCCeecccCchhhhcCC---C-eeeeec-------------------CCCCccceEEE
Q 011823 123 KLTLNKLYAWNL-VDYDRVVMLDSDNLFLEKTDELFQCG---Q-FCAVFI-------------------NPCIFHTGLFV 178 (476)
Q Consensus 123 ~~ty~KL~i~~L-~eydRVLYLDaD~LVl~nLdeLFd~~---~-~~Aa~d-------------------~P~yFNSGVmv 178 (476)
..++.|++++++ .+.+||||||+|+||.+||++||++| . ++|+.+ +.||||+|||+
T Consensus 437 ~~nh~RfyIPELLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviAAVedc~~rl~~~~~yl~~~~F~~~~CyFNSGVLL 516 (629)
T PLN02769 437 VFSHSHFLLPEIFKKLKKVVVLDDDVVVQRDLSFLWNLDMGGKVNGAVQFCGVRLGQLKNYLGDTNFDTNSCAWMSGLNV 516 (629)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEeCCEEecCcHHHHhcCCCCCCeEEEehhhhhhhhhhhhhhcccCCCccccccccCeeE
Confidence 378999999996 56999999999999999999999986 2 344431 12789999999
Q ss_pred EeCCHHHHHHHHHHHH----hC----CCCCCCCchhHHhcccCCCCCCCccCCCCCCCCCCCceeCCccccccc-hhccc
Q 011823 179 LQPSETVFKDMIHELE----TG----RENPDGADQGFIASYFPDLLDKPMFHPSLNGTKLEGHYRLPLGYQMDA-SYYYL 249 (476)
Q Consensus 179 Inps~~~f~~lle~l~----~~----~~~~~~~DQDiLN~~f~d~~~~~lf~p~~~~~~ld~~~rLp~~YN~~~-~~~yl 249 (476)
||.++|+.+++.+.+. .. ...++.+||+.+|..|.| .++.||.+||... ++.+.
T Consensus 517 INL~~WRk~nITe~~~~~~~~~~~~~~~~~~~~~Lp~lnlvF~g-----------------~v~~LD~rWNv~gLG~~~~ 579 (629)
T PLN02769 517 IDLDKWRELDVTETYLKLLQKFSKDGEESLRAAALPASLLTFQD-----------------LIYPLDDRWVLSGLGHDYG 579 (629)
T ss_pred eeHHHHHHhCHHHHHHHHHHHhhhcccccccccCcCHHHHHhcC-----------------eEEECCHHHcccccccccc
Confidence 9999988776655432 11 123456788888889998 6999999999764 22111
Q ss_pred ccccCCCCCCCeEEEeeCCCCCCCCcccccCcccchhhhHHHHH
Q 011823 250 RLRWSVPCGPNSVITFPGAPWLKPWYWWSWPVLPLGIEWHKHRL 293 (476)
Q Consensus 250 ~~~w~~~~~~~~IIHFtg~p~~KPW~~ws~p~~~l~~~W~~~r~ 293 (476)
..+ ...++++||||+|. .|||+.++ ..+....|..|..
T Consensus 580 -i~~-~~i~~paIIHYnG~--~KPW~e~~--i~~yr~~W~kYl~ 617 (629)
T PLN02769 580 -IDE-QAIKKAAVLHYNGN--MKPWLELG--IPKYKKYWKRFLN 617 (629)
T ss_pred -ccc-cccCCcEEEEECCC--CCCccCCC--CChHHHHHHHHhc
Confidence 111 23467899999998 89999876 5578889999874
No 19
>PLN02742 Probable galacturonosyltransferase
Probab=99.78 E-value=1.6e-18 Score=184.33 Aligned_cols=150 Identities=17% Similarity=0.204 Sum_probs=113.6
Q ss_pred hhhhHhhhhhhc-cCcCeEEEEcCCeecccCchhhhcCC---C-eeeeec-------------------------CCCCc
Q 011823 123 KLTLNKLYAWNL-VDYDRVVMLDSDNLFLEKTDELFQCG---Q-FCAVFI-------------------------NPCIF 172 (476)
Q Consensus 123 ~~ty~KL~i~~L-~eydRVLYLDaD~LVl~nLdeLFd~~---~-~~Aa~d-------------------------~P~yF 172 (476)
..+|.|++++++ .+.+||||||+|+||.+||++||++| . ++|+.+ +.|||
T Consensus 338 ~~~y~R~~lP~llp~l~KvlYLD~DvVV~~DL~eL~~~DL~~~viaAVedC~~~f~ry~~yLnfS~p~i~~~f~~~aC~f 417 (534)
T PLN02742 338 MLNHLRFYIPEIYPALEKVVFLDDDVVVQKDLTPLFSIDLHGNVNGAVETCLETFHRYHKYLNFSHPLISSHFDPDACGW 417 (534)
T ss_pred HHHHHHHHHHHHhhccCeEEEEeCCEEecCChHHHhcCCCCCCEEEEeCchhhhhhhhhhhhcccchhhhccCCCCcccc
Confidence 378999999996 56999999999999999999999986 2 333321 12899
Q ss_pred cceEEEEeCCHHHHHHHHHHH---HhCCCCCCCCchhHHhcc---cCCCCCCCccCCCCCCCCCCCceeCCccccccc-h
Q 011823 173 HTGLFVLQPSETVFKDMIHEL---ETGRENPDGADQGFIASY---FPDLLDKPMFHPSLNGTKLEGHYRLPLGYQMDA-S 245 (476)
Q Consensus 173 NSGVmvInps~~~f~~lle~l---~~~~~~~~~~DQDiLN~~---f~d~~~~~lf~p~~~~~~ld~~~rLp~~YN~~~-~ 245 (476)
|+||||||.++|+.+++.+.+ .+..++....|||.||.. |.| .+..|+.+||... +
T Consensus 418 NsGV~ViDL~~WRe~nITe~~~~w~e~n~~~~l~d~gaLpp~LLaF~g-----------------~~~~LD~rWNv~gLG 480 (534)
T PLN02742 418 AFGMNVFDLVAWRKANVTAIYHYWQEQNVDRTLWKLGTLPPGLLTFYG-----------------LTEPLDRRWHVLGLG 480 (534)
T ss_pred ccCcEEEeHHHHHhhcHHHHHHHHHHhccccccccccccchHHHHHcC-----------------cceecChhheecccc
Confidence 999999999999888776644 233344567899999974 776 5899999999854 2
Q ss_pred hcccccccCCCCCCCeEEEeeCCCCCCCCcccccCcccchhhhHHHHHHh
Q 011823 246 YYYLRLRWSVPCGPNSVITFPGAPWLKPWYWWSWPVLPLGIEWHKHRLQT 295 (476)
Q Consensus 246 ~~yl~~~w~~~~~~~~IIHFtg~p~~KPW~~ws~p~~~l~~~W~~~r~~t 295 (476)
+.+ +.. ....+++.||||+|. .|||...+ ..+....|..|-..+
T Consensus 481 ~~~-~v~-~~~i~~aaILHynG~--~KPWl~~~--i~~yr~~W~kYl~~s 524 (534)
T PLN02742 481 YDT-NID-PRLIESAAVLHFNGN--MKPWLKLA--IERYKPLWERYVNYS 524 (534)
T ss_pred ccc-ccc-hhhccCCeEEEECCC--CCcccccC--CcccchHHHHHHccC
Confidence 221 111 123467799999998 89999876 566778999886443
No 20
>PLN02829 Probable galacturonosyltransferase
Probab=99.77 E-value=5.6e-19 Score=189.81 Aligned_cols=148 Identities=18% Similarity=0.214 Sum_probs=112.4
Q ss_pred hhhhHhhhhhhc-cCcCeEEEEcCCeecccCchhhhcCC---Ce-eeeec-------------------------CCCCc
Q 011823 123 KLTLNKLYAWNL-VDYDRVVMLDSDNLFLEKTDELFQCG---QF-CAVFI-------------------------NPCIF 172 (476)
Q Consensus 123 ~~ty~KL~i~~L-~eydRVLYLDaD~LVl~nLdeLFd~~---~~-~Aa~d-------------------------~P~yF 172 (476)
..+|.|++++++ .+++||||||+|+||.+||++||++| .. +|+.+ ++|||
T Consensus 442 ~lnY~RfyLPeLLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviAAVedc~~~f~r~~~~l~fs~p~i~~~Fn~~~CyF 521 (639)
T PLN02829 442 ILNHLRFYLPEIFPKLNKVLFLDDDIVVQKDLTGLWSIDLKGNVNGAVETCGESFHRFDRYLNFSNPLISKNFDPHACGW 521 (639)
T ss_pred HHHHHHHHHHHHhcccCeEEEEeCCEEeCCChHHHHhCCCCCceEEEeccchhhhhhhhhhhhccchHhhhccCCcccce
Confidence 378999999997 56999999999999999999999986 33 33321 23799
Q ss_pred cceEEEEeCCHHHHHHHHHHHH----hCCCCCCCCchhHHhcc---cCCCCCCCccCCCCCCCCCCCceeCCccccccch
Q 011823 173 HTGLFVLQPSETVFKDMIHELE----TGRENPDGADQGFIASY---FPDLLDKPMFHPSLNGTKLEGHYRLPLGYQMDAS 245 (476)
Q Consensus 173 NSGVmvInps~~~f~~lle~l~----~~~~~~~~~DQDiLN~~---f~d~~~~~lf~p~~~~~~ld~~~rLp~~YN~~~~ 245 (476)
|+|||+||.+.|+.+++.+.+. .+.++ ...|||.||.. |.| .++.|+.+||...-
T Consensus 522 NSGVmVINL~~WRe~nITe~y~~wm~~n~~r-~L~dlgaLPp~Ll~F~g-----------------~i~~LD~rWNv~GL 583 (639)
T PLN02829 522 AYGMNVFDLDEWKRQNITEVYHSWQKLNHDR-QLWKLGTLPPGLITFWK-----------------RTYPLDRSWHVLGL 583 (639)
T ss_pred ecceEEEeHHHHHHhChHHHHHHHHHHccCC-ccccccCCChHHHHhcC-----------------ceEecChhheecCC
Confidence 9999999999998887765442 22233 45899999985 466 58999999998753
Q ss_pred hcccccccCCCCCCCeEEEeeCCCCCCCCcccccCcccchhhhHHHHH
Q 011823 246 YYYLRLRWSVPCGPNSVITFPGAPWLKPWYWWSWPVLPLGIEWHKHRL 293 (476)
Q Consensus 246 ~~yl~~~w~~~~~~~~IIHFtg~p~~KPW~~ws~p~~~l~~~W~~~r~ 293 (476)
. |.+.......++++||||+|. .|||...+ ..++...|..|..
T Consensus 584 G-y~~~v~~~~i~~aaIIHynG~--~KPWle~~--i~~yr~lW~kYl~ 626 (639)
T PLN02829 584 G-YNPNVNQRDIERAAVIHYNGN--MKPWLEIG--IPKYRNYWSKYVD 626 (639)
T ss_pred C-CCcccchhcccCCeEEEECCC--CCccccCC--cccchHHHHHHHh
Confidence 2 212111224567799999998 79999876 6678899998863
No 21
>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase
Probab=99.76 E-value=1.5e-18 Score=186.24 Aligned_cols=148 Identities=15% Similarity=0.202 Sum_probs=114.2
Q ss_pred hhhhHhhhhhhc-cCcCeEEEEcCCeecccCchhhhcCC---Ceeee-ec-------------------------CCCCc
Q 011823 123 KLTLNKLYAWNL-VDYDRVVMLDSDNLFLEKTDELFQCG---QFCAV-FI-------------------------NPCIF 172 (476)
Q Consensus 123 ~~ty~KL~i~~L-~eydRVLYLDaD~LVl~nLdeLFd~~---~~~Aa-~d-------------------------~P~yF 172 (476)
..+|.|++++++ .+++||||||+|+||.+||++||+++ ..+|+ .+ ++|||
T Consensus 460 ~lnY~Rf~LPelLp~l~KVLYLD~DVVV~gDLseLw~iDL~g~v~AAVedc~~~f~r~~~ylnfs~P~i~~yFNs~aCyf 539 (657)
T PLN02910 460 MLNHLRFYLPEVYPKLEKILFLDDDIVVQKDLTPLWSIDMQGMVNGAVETCKESFHRFDKYLNFSNPKISENFDPNACGW 539 (657)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEeCCEEecCchHHHHhCCcCCceEEEecccchhhhhhhhhhccCChhhhhccCCCCcee
Confidence 368999999996 56999999999999999999999986 33333 21 12678
Q ss_pred cceEEEEeCCHHHHHHHHHHH---HhCCCCCCCCchhHHh---cccCCCCCCCccCCCCCCCCCCCceeCCccccccchh
Q 011823 173 HTGLFVLQPSETVFKDMIHEL---ETGRENPDGADQGFIA---SYFPDLLDKPMFHPSLNGTKLEGHYRLPLGYQMDASY 246 (476)
Q Consensus 173 NSGVmvInps~~~f~~lle~l---~~~~~~~~~~DQDiLN---~~f~d~~~~~lf~p~~~~~~ld~~~rLp~~YN~~~~~ 246 (476)
|+|||+||.++|+.+++.+.+ .+..++....|||.|| ..|.| .++.|+.+||...-
T Consensus 540 NsGVmVIDL~~WRe~nITe~ye~w~eln~~~~L~dqgsLPpgLLvF~g-----------------~i~pLD~rWNv~GL- 601 (657)
T PLN02910 540 AFGMNMFDLKEWRKRNITGIYHYWQDLNEDRTLWKLGSLPPGLITFYN-----------------LTYPLDRSWHVLGL- 601 (657)
T ss_pred ecccEEEeHHHHHHhhHHHHHHHHHHhcccccccccCCCChHHHHHhC-----------------ceeecCchheecCC-
Confidence 889999999999888776643 2334556789999999 57877 58899999998752
Q ss_pred cccccccCCCCCCCeEEEeeCCCCCCCCcccccCcccchhhhHHHH
Q 011823 247 YYLRLRWSVPCGPNSVITFPGAPWLKPWYWWSWPVLPLGIEWHKHR 292 (476)
Q Consensus 247 ~yl~~~w~~~~~~~~IIHFtg~p~~KPW~~ws~p~~~l~~~W~~~r 292 (476)
.|.+.......++++||||+|. .|||.... ..++...|..|.
T Consensus 602 Gyd~~v~~~~i~~AAVLHynG~--~KPWl~l~--i~~Yr~~W~kYl 643 (657)
T PLN02910 602 GYDPALNQTEIENAAVVHYNGN--YKPWLDLA--IAKYKPYWSRYV 643 (657)
T ss_pred CCCcccccccccCcEEEEeCCC--CCcccccC--cccchHHHHHHc
Confidence 2222222224567899999998 89999876 678888999886
No 22
>COG5597 Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.68 E-value=6.8e-18 Score=167.86 Aligned_cols=184 Identities=27% Similarity=0.333 Sum_probs=126.8
Q ss_pred CCCCeEEEEEEeecCCCCccchHHHHHHHHHHHHhCC-CCcE-EEEEcCCCCHHHHHHHHhhCCCEEEEEeccCC----c
Q 011823 38 QRHKNAYATMMYMGTPRDYEFYVATRVMIRSLVRLHV-DADI-VVIASLDVPLRWVQALEQEDGAKVVRVENLNN----P 111 (476)
Q Consensus 38 ~~~~~AYvTivy~~t~~dYeyl~ga~VL~~SL~~~ns-~~dl-vVlvt~~Is~e~~~~L~~~~g~~v~~V~~i~~----p 111 (476)
.++++|+.+.+ |++|+ |+-.++++..-|+.... +..+ +++.-+++++...+.|+. +|..+..|+.+.. +
T Consensus 67 ~ng~~al~n~~---t~~d~-y~N~Tr~lv~~Lk~~~etkaKlV~vL~mkg~d~wk~d~l~l-dga~~~~vq~i~~hevv~ 141 (368)
T COG5597 67 TNGDYALGNRA---TLRDI-YLNRTRALVVVLKTGGETKAKLVEVLTMKGCDLWKTDLLPL-DGAFNARVQRINVHEVVP 141 (368)
T ss_pred hcCcccccchh---hhhce-eecccceehhhhhhcCcchhheeeehhhcccchhhhhcccc-chHHHHHhccchHhhhhh
Confidence 45677777777 66665 45557788888877653 3445 344566777766677766 5554444443321 1
Q ss_pred cc-ccccccchhhhhhHhhhhhhccCcCeEEEEcCCeecccCchhhhcCC--Ceeeeec---------------------
Q 011823 112 YK-DQANFDRRFKLTLNKLYAWNLVDYDRVVMLDSDNLFLEKTDELFQCG--QFCAVFI--------------------- 167 (476)
Q Consensus 112 ~~-~~~~~~~r~~~ty~KL~i~~L~eydRVLYLDaD~LVl~nLdeLFd~~--~~~Aa~d--------------------- 167 (476)
+. .......||..+++||.+|+++|||||+|||+|.|+++|+|+||+.| ++.|.+|
T Consensus 142 ~~~di~~~~~rw~~mftKLrVfeqtEyDRvifLDsDaivlknmDklFd~Pvyef~a~pD~~~sp~~fhrp~~~i~~~ft~ 221 (368)
T COG5597 142 FTKDIKPDFHRWLDMFTKLRVFEQTEYDRVIFLDSDAIVLKNMDKLFDYPVYEFAAAPDVYESPADFHRPNSGIFVSFTP 221 (368)
T ss_pred hhhccCcCcCcHHHHhHHHHhhhhhhhceEEEeccchHHhhhhHHHhcchhhhhccCCchhhCHHHhcCCCCccceeecH
Confidence 11 11123567899999999999999999999999999999999999976 4443321
Q ss_pred ------------------------C------C---CCccceEEEEeCCHHHHHHHHHHHHhCCCCC---CCCchhHHhcc
Q 011823 168 ------------------------N------P---CIFHTGLFVLQPSETVFKDMIHELETGRENP---DGADQGFIASY 211 (476)
Q Consensus 168 ------------------------~------P---~yFNSGVmvInps~~~f~~lle~l~~~~~~~---~~~DQDiLN~~ 211 (476)
+ | .+||||+|+++|++..+.+++... -++-+ +...|.++|-.
T Consensus 222 ~faayg~~r~~ly~Pylf~a~~dq~~~hstpP~fk~~FnagLmv~~Psk~hm~riv~~a--lPklydda~mmeqsllnla 299 (368)
T COG5597 222 AFAAYGKMRAALYAPYLFWARTDQTFLHSTPPDFKLKFNAGLMVGLPSKMHMLRIVWFA--LPKLYDDADMMEQSLLNLA 299 (368)
T ss_pred HHHhhcccHhhhccccccccccCCcccccCCCcHhhhhccCceeecchHHHHHHHHHHh--hHHhhhhhhHHHHHHHHHH
Confidence 0 1 489999999999999888887643 22323 23478888887
Q ss_pred cCCCCCCCccCCCCCCCCCCCceeCCcccc
Q 011823 212 FPDLLDKPMFHPSLNGTKLEGHYRLPLGYQ 241 (476)
Q Consensus 212 f~d~~~~~lf~p~~~~~~ld~~~rLp~~YN 241 (476)
++. ..|.| |.|+..+||
T Consensus 300 Yn~----~g~FP---------werld~~yN 316 (368)
T COG5597 300 YNY----EGFFP---------WERLDPRYN 316 (368)
T ss_pred Hhh----hccCc---------hhhcCcccc
Confidence 653 33444 789999999
No 23
>KOG1950 consensus Glycosyl transferase, family 8 - glycogenin [Carbohydrate transport and metabolism]
Probab=98.52 E-value=6.1e-08 Score=101.32 Aligned_cols=158 Identities=31% Similarity=0.455 Sum_probs=111.8
Q ss_pred CCCEEEEEeccCCcccccccccchhhhhhHhhhhhhccCcCeEEEEcCCeecccCchhhhc-CCCeeeeecCCCCccceE
Q 011823 98 DGAKVVRVENLNNPYKDQANFDRRFKLTLNKLYAWNLVDYDRVVMLDSDNLFLEKTDELFQ-CGQFCAVFINPCIFHTGL 176 (476)
Q Consensus 98 ~g~~v~~V~~i~~p~~~~~~~~~r~~~ty~KL~i~~L~eydRVLYLDaD~LVl~nLdeLFd-~~~~~Aa~d~P~yFNSGV 176 (476)
+|..+..++.++.........+-.....+.|++.|.+..+++.+.+|+|...+++.+.+|. ++.+++....+..||+|.
T Consensus 125 ~~a~i~~~~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~f~~~~~~~~~~~l~~~~n~~~ 204 (369)
T KOG1950|consen 125 DGAAIYLVDDIQRFRNDDANFDVPNELNYAKLYMFQLDFYSKLVKIDADDCILKNDDLLFSNWPDLFATNILPLIFNSGL 204 (369)
T ss_pred cCceEEEecchhhccCccccccccchhcccccceeeecccccceEEeccchhcCChhhhhhhchhhccCCCccceeccCc
Confidence 5666666665543222111122222457899999999999999999999999999999999 888998888888899999
Q ss_pred EEEeCCHHHHHHHHHHHHhCCCCCCCCchhHHhcccCCCCCCCccCCCCCCCCCCCceeCCccccccchhcc-cc--ccc
Q 011823 177 FVLQPSETVFKDMIHELETGRENPDGADQGFIASYFPDLLDKPMFHPSLNGTKLEGHYRLPLGYQMDASYYY-LR--LRW 253 (476)
Q Consensus 177 mvInps~~~f~~lle~l~~~~~~~~~~DQDiLN~~f~d~~~~~lf~p~~~~~~ld~~~rLp~~YN~~~~~~y-l~--~~w 253 (476)
|++.|+...++++++.. ...+.+.+.|||++|.+|..+. .+.|..+|....... .+ ..+
T Consensus 205 ~v~~ps~~~~~~~~~~~-~~~~~~~~~~q~~l~~~f~~~~-----------------~~~~~~~n~~~~~~~~~p~~~~l 266 (369)
T KOG1950|consen 205 LVFEPSLCNYKDLMEFS-EEFESYNGADQGFLHLIFSWIP-----------------DRPPPSVNLNLAKLWRHPKKNDL 266 (369)
T ss_pred cccCCCccchhhHHHhh-cccCCCCCccchhhHHHhhccc-----------------CCCcccccccccccccCccccch
Confidence 99999999898876654 3356788999999999999742 156666666543221 11 111
Q ss_pred CCCCC-CCeEEEeeCCCCCCCCc
Q 011823 254 SVPCG-PNSVITFPGAPWLKPWY 275 (476)
Q Consensus 254 ~~~~~-~~~IIHFtg~p~~KPW~ 275 (476)
..... ....+||.|. .|||.
T Consensus 267 ~~~~~~~~~~~~y~~~--~~p~~ 287 (369)
T KOG1950|consen 267 SRASSVLRYALHYLGA--NKPEL 287 (369)
T ss_pred hhcccccchhhhcccc--CCCCc
Confidence 11111 1356799997 57776
No 24
>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [].
Probab=98.09 E-value=4.4e-05 Score=73.01 Aligned_cols=169 Identities=16% Similarity=0.125 Sum_probs=95.5
Q ss_pred CHHHHHHHHhhCCCEEEEEeccCCccc--ccccccchh-hhhhHhhhhhh-c-cCcCeEEEEcCCeecccCchhhhcCC-
Q 011823 87 PLRWVQALEQEDGAKVVRVENLNNPYK--DQANFDRRF-KLTLNKLYAWN-L-VDYDRVVMLDSDNLFLEKTDELFQCG- 160 (476)
Q Consensus 87 s~e~~~~L~~~~g~~v~~V~~i~~p~~--~~~~~~~r~-~~ty~KL~i~~-L-~eydRVLYLDaD~LVl~nLdeLFd~~- 160 (476)
++++.+.+++ .|..+..+.....+.. ......+.+ ..++.|..+-. + ..--.|+++|+|++.++|..++|+.+
T Consensus 12 D~~t~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~L~~G~~vl~~D~Dvv~~~dp~~~~~~~~ 90 (212)
T PF03407_consen 12 DEETYDALEE-LGPPCFYFPSDASESEDSAFRFGSKAFQKLTWLKPKVLLDLLELGYDVLFSDADVVWLRDPLPYFENPD 90 (212)
T ss_pred CHHHHHHHHh-cCCCeEEEecccccccchhhhcCCHHHHHHHHHHHHHHHHHHHcCCceEEecCCEEEecCcHHhhccCC
Confidence 4677788887 6776554443211111 101112223 35667776543 2 33446999999999999999999333
Q ss_pred -Ceeeeec---------CCCCccceEEEEeCCHHH---HHHHHHHHHhCCCCCCCCchhHHhcccCCCCCCCccCCCCCC
Q 011823 161 -QFCAVFI---------NPCIFHTGLFVLQPSETV---FKDMIHELETGRENPDGADQGFIASYFPDLLDKPMFHPSLNG 227 (476)
Q Consensus 161 -~~~Aa~d---------~P~yFNSGVmvInps~~~---f~~lle~l~~~~~~~~~~DQDiLN~~f~d~~~~~lf~p~~~~ 227 (476)
.+....| ....+|+|++.++++... +++..+.+.+. ....||+++|..+.+...+.
T Consensus 91 ~Di~~~~d~~~~~~~~~~~~~~n~G~~~~r~t~~~~~~~~~w~~~~~~~---~~~~DQ~~~n~~l~~~~~~~-------- 159 (212)
T PF03407_consen 91 ADILFSSDGWDGTNSDRNGNLVNTGFYYFRPTPRTIAFLEDWLERMAES---PGCWDQQAFNELLREQAARY-------- 159 (212)
T ss_pred CceEEecCCCcccchhhcCCccccceEEEecCHHHHHHHHHHHHHHHhC---CCcchHHHHHHHHHhcccCC--------
Confidence 2222222 124579999999998765 44444444332 23359999999988732100
Q ss_pred CCCCCceeCCccccccchhcccc-cccCCC--CCCCeEEEeeCC
Q 011823 228 TKLEGHYRLPLGYQMDASYYYLR-LRWSVP--CGPNSVITFPGA 268 (476)
Q Consensus 228 ~~ld~~~rLp~~YN~~~~~~yl~-~~w~~~--~~~~~IIHFtg~ 268 (476)
..-.+..||...-.....++.. ..|... ..++.+||.+..
T Consensus 160 -~~~~~~~L~~~~f~~g~~~f~~~~~~~~~~~~~~p~~vH~n~~ 202 (212)
T PF03407_consen 160 -GGLRVRFLPPSLFPNGHGYFCQSRDWAWVPTKNKPYIVHANCC 202 (212)
T ss_pred -cCcEEEEeCHHHeeccccceeecchhhhhccccccceEEEcCC
Confidence 0115777776554333222222 222211 246799998764
No 25
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose. It is implicated in late Golgi modifications [][][]. The proteins matching this entry are conserved in fungi and also found in some phototrophic organisms.; GO: 0006486 protein glycosylation
Probab=98.00 E-value=3.6e-05 Score=77.35 Aligned_cols=111 Identities=23% Similarity=0.286 Sum_probs=76.3
Q ss_pred chHHHHHHHHHHHHhCCCCcEEEEEc--CCCCHHHHHHHHhhCCCEEEEEeccCCcccccccccchhhhhhHhhhhhhcc
Q 011823 58 FYVATRVMIRSLVRLHVDADIVVIAS--LDVPLRWVQALEQEDGAKVVRVENLNNPYKDQANFDRRFKLTLNKLYAWNLV 135 (476)
Q Consensus 58 yl~ga~VL~~SL~~~ns~~dlvVlvt--~~Is~e~~~~L~~~~g~~v~~V~~i~~p~~~~~~~~~r~~~ty~KL~i~~L~ 135 (476)
+...+..+++.||+.+.+.|+-|++. ++++++.++.|....++..++++.+..+........++ .-..|..+--..
T Consensus 12 ~~~~a~~lI~~LR~~g~~LPIEI~~~~~~dl~~~~~~~l~~~q~v~~vd~~~~~~~~~~~~~~~~~--~~~~K~lA~l~s 89 (271)
T PF11051_consen 12 YLWLALRLIRVLRRLGNTLPIEIIYPGDDDLSKEFCEKLLPDQDVWFVDASCVIDPDYLGKSFSKK--GFQNKWLALLFS 89 (271)
T ss_pred cHHHHHHHHHHHHHhCCCCCEEEEeCCccccCHHHHHHHhhhhhhheecceEEeeccccccccccC--CchhhhhhhhhC
Confidence 46667899999999999999998874 78999998888752233334433332221110101100 223455554457
Q ss_pred CcCeEEEEcCCeecccCchhhhcCCCeeeeecCCCCccceEEEE
Q 011823 136 DYDRVVMLDSDNLFLEKTDELFQCGQFCAVFINPCIFHTGLFVL 179 (476)
Q Consensus 136 eydRVLYLDaD~LVl~nLdeLFd~~~~~Aa~d~P~yFNSGVmvI 179 (476)
.+|.||+||+|++.++|+++||+. +.|=.+|.+..
T Consensus 90 sFeevllLDaD~vpl~~p~~lF~~---------~~yk~tG~lfw 124 (271)
T PF11051_consen 90 SFEEVLLLDADNVPLVDPEKLFES---------EEYKKTGALFW 124 (271)
T ss_pred CcceEEEEcCCcccccCHHHHhcC---------ccccccCEEEE
Confidence 899999999999999999999996 45666777777
No 26
>KOG1879 consensus UDP-glucose:glycoprotein glucosyltransferase [Carbohydrate transport and metabolism]
Probab=96.58 E-value=0.012 Score=69.11 Aligned_cols=200 Identities=16% Similarity=0.204 Sum_probs=113.4
Q ss_pred EEEEEeecCCCCccchHHHHHHHHHHHHhCCCCcEEE-EEcCCCCHHHHH---HHHhhCCCEEEEEeccCCcc-cccccc
Q 011823 44 YATMMYMGTPRDYEFYVATRVMIRSLVRLHVDADIVV-IASLDVPLRWVQ---ALEQEDGAKVVRVENLNNPY-KDQANF 118 (476)
Q Consensus 44 YvTivy~~t~~dYeyl~ga~VL~~SL~~~ns~~dlvV-lvt~~Is~e~~~---~L~~~~g~~v~~V~~i~~p~-~~~~~~ 118 (476)
.+++..-.+..-|| .-.++|+.|+.+| ++.|+-+ +...=+|+.-++ .+.+.+|.+.--|++ .-|. ..+...
T Consensus 1181 vINIFSvASGHLYE--RflrIMm~Svlkn-TktpVKFWfLkNyLSPtFKe~iP~mA~eYnFeyElv~Y-kWPrWLhqQ~E 1256 (1470)
T KOG1879|consen 1181 VINIFSVASGHLYE--RFLRIMMLSVLKN-TKTPVKFWFLKNYLSPTFKESIPHMAKEYNFEYELVQY-KWPRWLHQQTE 1256 (1470)
T ss_pred eEEEEeeccccHHH--HHHHHHHHHHHhC-CCCceeEEeehhhcChHHHHHHHHHHHHhCceEEEEEe-cCchhhhhhhh
Confidence 44444332334354 3366899999885 5555444 344456655444 444447776654542 1221 111111
Q ss_pred cchhhhhhHhhhhhh-c--cCcCeEEEEcCCeecccCchhhhcCCC---------eeeee---c----C-----------
Q 011823 119 DRRFKLTLNKLYAWN-L--VDYDRVVMLDSDNLFLEKTDELFQCGQ---------FCAVF---I----N----------- 168 (476)
Q Consensus 119 ~~r~~~ty~KL~i~~-L--~eydRVLYLDaD~LVl~nLdeLFd~~~---------~~Aa~---d----~----------- 168 (476)
..|..-.| |+..-+ | .+.+||||+|||.||..|++||.+.+- ||--. | |
T Consensus 1257 KQRiiWgy-KILFLDVLFPL~v~KvIfVDADQIVR~DL~EL~dfdl~GaPygYtPfCdsR~EMDGyRFWK~GYW~~hL~g 1335 (1470)
T KOG1879|consen 1257 KQRIIWGY-KILFLDVLFPLNVDKVIFVDADQIVRADLKELMDFDLGGAPYGYTPFCDSRREMDGYRFWKQGYWKKHLRG 1335 (1470)
T ss_pred hhhhhhhh-hhhhhhhccccccceEEEEcchHhhhhhhHHHHhcccCCCccccCccccccccccchhHHhhhHHHHHhcc
Confidence 12311123 333323 3 579999999999999999999998861 34321 1 1
Q ss_pred CCCccceEEEEeCCHHHHHHHH---------HHHHhCCCCCCCCchhHHhcccCCCCCCCccCCCCCCCCCCCceeCCcc
Q 011823 169 PCIFHTGLFVLQPSETVFKDMI---------HELETGRENPDGADQGFIASYFPDLLDKPMFHPSLNGTKLEGHYRLPLG 239 (476)
Q Consensus 169 P~yFNSGVmvInps~~~f~~ll---------e~l~~~~~~~~~~DQDiLN~~f~d~~~~~lf~p~~~~~~ld~~~rLp~~ 239 (476)
-.|-=|...|+|.+ +|+++- +.+...+.+...-|||+=|...... .++.||..
T Consensus 1336 rkYHISALYVVDLk--rFReiaAGDrLR~qYQ~LS~DPNSLsNLDQDLPNnm~hqV----------------pIkSLPqe 1397 (1470)
T KOG1879|consen 1336 RKYHISALYVVDLK--RFREIAAGDRLRGQYQALSQDPNSLSNLDQDLPNNMQHQV----------------PIKSLPQE 1397 (1470)
T ss_pred CccccceeeeeeHH--HHHhcccchHHHHHHHhhcCCcchhhhccccccccceeec----------------ccccCCcc
Confidence 14777899999884 444442 2333334556677999999988763 47778866
Q ss_pred ccccchhcccccccCC--CCCCCeEEEeeCCCCCCCCccc
Q 011823 240 YQMDASYYYLRLRWSV--PCGPNSVITFPGAPWLKPWYWW 277 (476)
Q Consensus 240 YN~~~~~~yl~~~w~~--~~~~~~IIHFtg~p~~KPW~~w 277 (476)
|=.= ..|-. ..+.+++|.-|- -||-..
T Consensus 1398 WLWC-------ETWC~d~skkkAktIDLCn----NP~TKE 1426 (1470)
T KOG1879|consen 1398 WLWC-------ETWCDDESKKKAKTIDLCN----NPLTKE 1426 (1470)
T ss_pred hhhh-------hhhcCchhhhhchhhhhhc----Cccccc
Confidence 5431 11211 223467888775 466654
No 27
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of Caenorhabditis elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane; PDB: 2P72_B 2P73_A 2P6W_A.
Probab=91.77 E-value=0.11 Score=51.41 Aligned_cols=90 Identities=18% Similarity=0.113 Sum_probs=18.2
Q ss_pred hhhHhhhhhh--c---cCcCeEEEEcCCeecccCchhh---hc----CCCe-----eeee--------------------
Q 011823 124 LTLNKLYAWN--L---VDYDRVVMLDSDNLFLEKTDEL---FQ----CGQF-----CAVF-------------------- 166 (476)
Q Consensus 124 ~ty~KL~i~~--L---~eydRVLYLDaD~LVl~nLdeL---Fd----~~~~-----~Aa~-------------------- 166 (476)
.+|.|+.+-. + .++|=|.|||+|+++...=-+| +- ++.. ...+
T Consensus 59 ~~W~K~~~lr~~m~~~P~~~wv~~lD~Dali~n~~~~L~~~il~p~~L~~~~~r~~~~~p~~~~~~~~~~~~~~~~~li~ 138 (239)
T PF05637_consen 59 GSWAKIPALRAAMKKYPEAEWVWWLDSDALIMNPDFSLEEHILSPSRLDSLLLRDVPIVPPDSIIKTYSVIDGNDIHLII 138 (239)
T ss_dssp HHHTHHHHHHHHHHH-TT-SEEEEE-TTEEE-------------------------------------------------
T ss_pred hhhHHHHHHHHHHHhCCCCCEEEEEcCCeEEEeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4577766543 3 6789999999999999753332 11 0100 0000
Q ss_pred -cCCCCccceEEEEeCCHHHHHHHHHHHHhCC---CC---CCCCchhHHhcccCC
Q 011823 167 -INPCIFHTGLFVLQPSETVFKDMIHELETGR---EN---PDGADQGFIASYFPD 214 (476)
Q Consensus 167 -d~P~yFNSGVmvInps~~~f~~lle~l~~~~---~~---~~~~DQDiLN~~f~d 214 (476)
.+-..+|+|+++++.+.+.. .+++...... .. ....||+.|-.++..
T Consensus 139 t~d~~gLNtGsFliRns~ws~-~fLd~w~~~~~~~~~~~~~~~~EQsAl~~ll~~ 192 (239)
T PF05637_consen 139 TQDWNGLNTGSFLIRNSPWSR-DFLDAWADPLYRNYDWDQLEFDEQSALEHLLQW 192 (239)
T ss_dssp -------------------------------------------------------
T ss_pred ccccccccccccccccccccc-ccccccccccccccccccccccccccccccccc
Confidence 01258999999999987764 4555543221 11 236899999988864
No 28
>PLN03182 xyloglucan 6-xylosyltransferase; Provisional
Probab=91.35 E-value=0.67 Score=49.40 Aligned_cols=86 Identities=19% Similarity=0.205 Sum_probs=51.4
Q ss_pred hhHhhhhhh-----ccCcCeEEEEcCCeecccCchhhhcCC--Ce----eeeec---------CCCCccceEEEEeCCHH
Q 011823 125 TLNKLYAWN-----LVDYDRVVMLDSDNLFLEKTDELFQCG--QF----CAVFI---------NPCIFHTGLFVLQPSET 184 (476)
Q Consensus 125 ty~KL~i~~-----L~eydRVLYLDaD~LVl~nLdeLFd~~--~~----~Aa~d---------~P~yFNSGVmvInps~~ 184 (476)
.|.|+-+-. ..++|=+-|||+|++++.. -|+.| .+ -.+.. +=.-.|+|+++|+..+|
T Consensus 181 ~WaKlpaLR~aM~~~PeaEWiWWLDsDALImNm---sfelPlery~~~NlVihg~~~~l~~~kdW~GLNtGsFLIRNcqW 257 (429)
T PLN03182 181 FWAKLPLLRKLMLAHPEVEWIWWMDSDALFTDM---TFEIPLEKYEGYNLVIHGWDELVYDQKSWIGLNTGSFLIRNCQW 257 (429)
T ss_pred chhHHHHHHHHHHHCCCceEEEEecCCceeecC---CCCCCHhHcCCcCeeeccchhhheeccccCccceeeEEEEcCHH
Confidence 355554432 3679999999999999863 23333 11 01111 11479999999998766
Q ss_pred HHHHHHH----------------HH---HhCCCCCCCCchhHHhcccC
Q 011823 185 VFKDMIH----------------EL---ETGRENPDGADQGFIASYFP 213 (476)
Q Consensus 185 ~f~~lle----------------~l---~~~~~~~~~~DQDiLN~~f~ 213 (476)
..+=+-. .+ ...+..+...||..|-..+.
T Consensus 258 SldlLDaWa~mgp~~~~~~~~g~~l~~~l~~rp~~eaDDQSAlvyLl~ 305 (429)
T PLN03182 258 SLDLLDAWAPMGPKGPIRDEAGKILTAELKGRPAFEADDQSALVYLLL 305 (429)
T ss_pred HHHHHHHHHhcCCCCchhhhHHHHHHHhhcCCCCCCcccHHHHHHHHH
Confidence 4432211 11 11233566789999988764
No 29
>KOG1928 consensus Alpha-1,4-N-acetylglucosaminyltransferase [Carbohydrate transport and metabolism]
Probab=91.18 E-value=0.17 Score=53.21 Aligned_cols=75 Identities=11% Similarity=0.085 Sum_probs=50.9
Q ss_pred EEEcCCeecccCchhhhcCCCeeeeecCCCCccceEEEEeCCHHHHHHHHHHHHh-CCCC-CCCCchhHHhcccCCC
Q 011823 141 VMLDSDNLFLEKTDELFQCGQFCAVFINPCIFHTGLFVLQPSETVFKDMIHELET-GREN-PDGADQGFIASYFPDL 215 (476)
Q Consensus 141 LYLDaD~LVl~nLdeLFd~~~~~Aa~d~P~yFNSGVmvInps~~~f~~lle~l~~-~~~~-~~~~DQDiLN~~f~d~ 215 (476)
||||.|+||++|+.+|=+.=....+..+-.+.|.+||.+++......+.++.... ..++ +..+-.+++..+.+-|
T Consensus 242 vYLDTDvIvLksl~~l~N~ig~~~~~~~~~~lnnavl~F~k~Hpfl~~cl~eF~~tfNg~~WG~NGP~LvTRVakr~ 318 (409)
T KOG1928|consen 242 VYLDTDVIVLKSLSNLRNVIGVDPATQAWTRLNNAVLIFDKNHPFLLECLREFALTYNGNIWGHNGPYLVTRVAKRW 318 (409)
T ss_pred EEeeccEEEecccccccccccccchhhHHHhhcCceeecCCCCHHHHHHHHHHHHhccccccccCCcHHHHHHHHHH
Confidence 8999999999999998764221122123468999999999998877776666543 2233 2334556777766543
No 30
>PLN03181 glycosyltransferase; Provisional
Probab=85.21 E-value=3.5 Score=44.30 Aligned_cols=89 Identities=17% Similarity=0.202 Sum_probs=51.7
Q ss_pred hhHhhhhhh-----ccCcCeEEEEcCCeecccCchhh--hcCCCeeee-ecCC---------CCccceEEEEeCCHHHHH
Q 011823 125 TLNKLYAWN-----LVDYDRVVMLDSDNLFLEKTDEL--FQCGQFCAV-FINP---------CIFHTGLFVLQPSETVFK 187 (476)
Q Consensus 125 ty~KL~i~~-----L~eydRVLYLDaD~LVl~nLdeL--Fd~~~~~Aa-~d~P---------~yFNSGVmvInps~~~f~ 187 (476)
.|.|+-+-. ..++|-+-|||+|++++..=-+| -.....-.+ ..+| .-+|+|+++|+.++|..+
T Consensus 182 ~WaKipalRaAM~a~PeAEWfWWLDsDALIMNp~~sLPl~ry~~~NLvvhg~p~~vy~~qdw~GlN~GsFLIRNcqWSl~ 261 (453)
T PLN03181 182 YWAKLPVVRAAMLAHPEAEWIWWVDSDAVFTDMDFKLPLHRYRDHNLVVHGWPKLIYEKRSWTALNAGVFLIRNCQWSLD 261 (453)
T ss_pred hhhHHHHHHHHHHHCCCceEEEEecCCceeecCCCCCCHhhcCCccccccCCcccccccccccccceeeeEEecCHHHHH
Confidence 456655433 46899999999999999652221 111111111 1111 479999999998765432
Q ss_pred HH-------------------HHHHHhCCCCCCCCchhHHhcccC
Q 011823 188 DM-------------------IHELETGRENPDGADQGFIASYFP 213 (476)
Q Consensus 188 ~l-------------------le~l~~~~~~~~~~DQDiLN~~f~ 213 (476)
=| +....+.+..+...||..|-..+-
T Consensus 262 LLDaWa~Mgp~~p~~~~~G~~l~~~l~~r~~~eaDDQsaLvyll~ 306 (453)
T PLN03181 262 FMDAWASMGPASPEYAKWGKILRSTFKDKLFPESDDQSALVYLLY 306 (453)
T ss_pred HHHHHHhcCCCCchHHHHHHHHHHHhCCCCCCCccchHHHHHHHH
Confidence 11 111112234456789999987654
No 31
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=79.80 E-value=42 Score=35.03 Aligned_cols=24 Identities=21% Similarity=0.112 Sum_probs=18.5
Q ss_pred hccCcCeEEEEcCCeecccC-chhh
Q 011823 133 NLVDYDRVVMLDSDNLFLEK-TDEL 156 (476)
Q Consensus 133 ~L~eydRVLYLDaD~LVl~n-LdeL 156 (476)
+..++|-++++|+|+.+-.| ++++
T Consensus 123 ~~a~ge~i~~~DaD~~~~p~~L~~l 147 (373)
T TIGR03472 123 PHARHDILVIADSDISVGPDYLRQV 147 (373)
T ss_pred HhccCCEEEEECCCCCcChhHHHHH
Confidence 44679999999999998665 4443
No 32
>PRK11204 N-glycosyltransferase; Provisional
Probab=76.99 E-value=31 Score=36.23 Aligned_cols=84 Identities=13% Similarity=0.122 Sum_probs=42.4
Q ss_pred HHHHHHHHHHhC-CCCcEEEEEcCCCCHHHHHHHHhh--CCCEEEEEeccCCcccccccccchhhhhhHhhhhhhccCcC
Q 011823 62 TRVMIRSLVRLH-VDADIVVIASLDVPLRWVQALEQE--DGAKVVRVENLNNPYKDQANFDRRFKLTLNKLYAWNLVDYD 138 (476)
Q Consensus 62 a~VL~~SL~~~n-s~~dlvVlvt~~Is~e~~~~L~~~--~g~~v~~V~~i~~p~~~~~~~~~r~~~ty~KL~i~~L~eyd 138 (476)
+.-++.|+.+.+ ++.+++| ++|+-+++..+.+++. ...++..+..-++. . + ..+.+ ...+..++|
T Consensus 69 i~~~l~sl~~q~yp~~eiiV-vdD~s~d~t~~~l~~~~~~~~~v~~i~~~~n~--G-----k--a~aln--~g~~~a~~d 136 (420)
T PRK11204 69 VEETISHLLALRYPNYEVIA-INDGSSDNTGEILDRLAAQIPRLRVIHLAENQ--G-----K--ANALN--TGAAAARSE 136 (420)
T ss_pred HHHHHHHHHhCCCCCeEEEE-EECCCCccHHHHHHHHHHhCCcEEEEEcCCCC--C-----H--HHHHH--HHHHHcCCC
Confidence 445677877643 4444443 4555555555555542 22333323211111 0 0 01111 122335799
Q ss_pred eEEEEcCCeecccC-chhhh
Q 011823 139 RVVMLDSDNLFLEK-TDELF 157 (476)
Q Consensus 139 RVLYLDaD~LVl~n-LdeLF 157 (476)
-++.+|+|.++-.| +.++.
T Consensus 137 ~i~~lDaD~~~~~d~L~~l~ 156 (420)
T PRK11204 137 YLVCIDGDALLDPDAAAYMV 156 (420)
T ss_pred EEEEECCCCCCChhHHHHHH
Confidence 99999999998776 44443
No 33
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=66.80 E-value=33 Score=29.67 Aligned_cols=105 Identities=13% Similarity=0.048 Sum_probs=55.1
Q ss_pred HHHHHHHHHHhCCCCcEEEEEcCCCCHHHHHHHHhhCCCEEEEEeccCCcccccccccchhhhhhHhhhhhhccCcCeEE
Q 011823 62 TRVMIRSLVRLHVDADIVVIASLDVPLRWVQALEQEDGAKVVRVENLNNPYKDQANFDRRFKLTLNKLYAWNLVDYDRVV 141 (476)
Q Consensus 62 a~VL~~SL~~~ns~~dlvVlvt~~Is~e~~~~L~~~~g~~v~~V~~i~~p~~~~~~~~~r~~~ty~KL~i~~L~eydRVL 141 (476)
+.-++.|+.+......-+++++++-+++..+.+++ ...++..+. .+.. . ...-.+-...+..+.|-++
T Consensus 12 l~~~l~sl~~~~~~~~~iiivdd~s~~~~~~~~~~-~~~~~~~~~---~~~~------~--g~~~a~n~~~~~~~~~~i~ 79 (166)
T cd04186 12 LKACLDSLLAQTYPDFEVIVVDNASTDGSVELLRE-LFPEVRLIR---NGEN------L--GFGAGNNQGIREAKGDYVL 79 (166)
T ss_pred HHHHHHHHHhccCCCeEEEEEECCCCchHHHHHHH-hCCCeEEEe---cCCC------c--ChHHHhhHHHhhCCCCEEE
Confidence 45677888876532223344555555666677766 332222121 1110 0 0112233334445899999
Q ss_pred EEcCCeecccC-chhhhcC----CCeeeeecCCCCccceEEEEeC
Q 011823 142 MLDSDNLFLEK-TDELFQC----GQFCAVFINPCIFHTGLFVLQP 181 (476)
Q Consensus 142 YLDaD~LVl~n-LdeLFd~----~~~~Aa~d~P~yFNSGVmvInp 181 (476)
++|+|..+..+ +..+.+. +...++... ..++.++++.
T Consensus 80 ~~D~D~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 121 (166)
T cd04186 80 LLNPDTVVEPGALLELLDAAEQDPDVGIVGPK---VSGAFLLVRR 121 (166)
T ss_pred EECCCcEECccHHHHHHHHHHhCCCceEEEcc---CceeeEeeeH
Confidence 99999998766 4444442 122222111 6677777766
No 34
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=65.20 E-value=18 Score=31.01 Aligned_cols=85 Identities=15% Similarity=0.217 Sum_probs=45.8
Q ss_pred HHHHHHHHHHhCCCCcEEE-EEcCCCCHHHHHHHHhhC--CCEEEEEeccCCcccccccccchhhhhhHhhhhhhccCcC
Q 011823 62 TRVMIRSLVRLHVDADIVV-IASLDVPLRWVQALEQED--GAKVVRVENLNNPYKDQANFDRRFKLTLNKLYAWNLVDYD 138 (476)
Q Consensus 62 a~VL~~SL~~~ns~~dlvV-lvt~~Is~e~~~~L~~~~--g~~v~~V~~i~~p~~~~~~~~~r~~~ty~KL~i~~L~eyd 138 (476)
+.-++.||++. +..+.-+ +++++-+++..+.+++.. +..+..+..-.+ . ...-.+-...+..+.+
T Consensus 13 l~~~l~sl~~q-~~~~~eiivvdd~s~d~~~~~~~~~~~~~~~i~~i~~~~n---------~--g~~~~~n~~~~~a~~~ 80 (169)
T PF00535_consen 13 LERTLESLLKQ-TDPDFEIIVVDDGSTDETEEILEEYAESDPNIRYIRNPEN---------L--GFSAARNRGIKHAKGE 80 (169)
T ss_dssp HHHHHHHHHHH-SGCEEEEEEEECS-SSSHHHHHHHHHCCSTTEEEEEHCCC---------S--HHHHHHHHHHHH--SS
T ss_pred HHHHHHHHhhc-cCCCEEEEEecccccccccccccccccccccccccccccc---------c--ccccccccccccccee
Confidence 44567888887 3333333 344444666777777631 333332321111 1 1123334455566777
Q ss_pred eEEEEcCCeecccC-chhhhc
Q 011823 139 RVVMLDSDNLFLEK-TDELFQ 158 (476)
Q Consensus 139 RVLYLDaD~LVl~n-LdeLFd 158 (476)
-++++|+|..+..+ ++++.+
T Consensus 81 ~i~~ld~D~~~~~~~l~~l~~ 101 (169)
T PF00535_consen 81 YILFLDDDDIISPDWLEELVE 101 (169)
T ss_dssp EEEEEETTEEE-TTHHHHHHH
T ss_pred EEEEeCCCceEcHHHHHHHHH
Confidence 99999999999988 666665
No 35
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=64.73 E-value=23 Score=29.52 Aligned_cols=82 Identities=20% Similarity=0.208 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHhCC-CCcEEEEEcCCCCHHHHHHHHhhCC--CEEEEEeccCCcccccccccchhhhhhHhhhhhhccCc
Q 011823 61 ATRVMIRSLVRLHV-DADIVVIASLDVPLRWVQALEQEDG--AKVVRVENLNNPYKDQANFDRRFKLTLNKLYAWNLVDY 137 (476)
Q Consensus 61 ga~VL~~SL~~~ns-~~dlvVlvt~~Is~e~~~~L~~~~g--~~v~~V~~i~~p~~~~~~~~~r~~~ty~KL~i~~L~ey 137 (476)
.+..++.|+.+... ...+++ ++++-+++..+.+++... .....+....+. .....+-...+..+.
T Consensus 11 ~l~~~l~s~~~~~~~~~~i~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------g~~~~~~~~~~~~~~ 78 (156)
T cd00761 11 YLERCLESLLAQTYPNFEVIV-VDDGSTDGTLEILEEYAKKDPRVIRVINEENQ-----------GLAAARNAGLKAARG 78 (156)
T ss_pred HHHHHHHHHHhCCccceEEEE-EeCCCCccHHHHHHHHHhcCCCeEEEEecCCC-----------ChHHHHHHHHHHhcC
Confidence 35567888888753 344444 445555556666655211 112111111110 111222233333479
Q ss_pred CeEEEEcCCeecccCch
Q 011823 138 DRVVMLDSDNLFLEKTD 154 (476)
Q Consensus 138 dRVLYLDaD~LVl~nLd 154 (476)
|.++++|+|.++..+.-
T Consensus 79 d~v~~~d~D~~~~~~~~ 95 (156)
T cd00761 79 EYILFLDADDLLLPDWL 95 (156)
T ss_pred CEEEEECCCCccCccHH
Confidence 99999999999877743
No 36
>PRK15382 non-LEE encoded effector protein NleB; Provisional
Probab=61.44 E-value=9.5 Score=38.34 Aligned_cols=47 Identities=17% Similarity=0.270 Sum_probs=36.6
Q ss_pred cCeEEEEcCCeecccCchhhhcCCCeeeeec---CCCCccceEEEEeCCH
Q 011823 137 YDRVVMLDSDNLFLEKTDELFQCGQFCAVFI---NPCIFHTGLFVLQPSE 183 (476)
Q Consensus 137 ydRVLYLDaD~LVl~nLdeLFd~~~~~Aa~d---~P~yFNSGVmvInps~ 183 (476)
-+-++|||+||++.+.+--|+.-|.++.-.+ +.--.-.|.+++|.+.
T Consensus 211 ~~GCIYLD~DMilT~KLG~ly~PDGIavhV~r~~~~~slENg~I~VnRsn 260 (326)
T PRK15382 211 CEGCIYLDADMIITDKLGVLYAPDGIAVHVDCNDDSKSLENGAIVVNRSN 260 (326)
T ss_pred CCceEEeecceeeecccccEEcCCceEEEEEecCCccccccceEEEccCC
Confidence 5779999999999999999998887766543 3344556888888763
No 37
>PRK15384 type III secretion system protein; Provisional
Probab=60.33 E-value=9.7 Score=38.28 Aligned_cols=47 Identities=13% Similarity=0.246 Sum_probs=36.3
Q ss_pred cCeEEEEcCCeecccCchhhhcCCCeeeeec---CCCCccceEEEEeCCH
Q 011823 137 YDRVVMLDSDNLFLEKTDELFQCGQFCAVFI---NPCIFHTGLFVLQPSE 183 (476)
Q Consensus 137 ydRVLYLDaD~LVl~nLdeLFd~~~~~Aa~d---~P~yFNSGVmvInps~ 183 (476)
-+-++|||+||++.+.+--|+.-|.++.-.+ +.--.-.|.+++|.+.
T Consensus 216 ~~GCIYLDaDMilT~KLG~ly~PDGIavhV~r~~~~~slENg~I~VnRsn 265 (336)
T PRK15384 216 NSGCIYLDADMIITEKLGGIYIPDGIAVHVERIDGRASMENGIIAVDRNN 265 (336)
T ss_pred CCceEEeeccceeecccccEEcCCceEEEEEecCCceecccceEEEccCC
Confidence 5679999999999999999998887766543 3334556888888763
No 38
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=59.00 E-value=47 Score=31.61 Aligned_cols=85 Identities=13% Similarity=0.064 Sum_probs=43.7
Q ss_pred HHHHHHHHHHhC-CCCcE-EEEEcCCCCHHHHHHHHhhCCC-EEEEEeccCCcccccccccchhhhhhHhhhhhhccCcC
Q 011823 62 TRVMIRSLVRLH-VDADI-VVIASLDVPLRWVQALEQEDGA-KVVRVENLNNPYKDQANFDRRFKLTLNKLYAWNLVDYD 138 (476)
Q Consensus 62 a~VL~~SL~~~n-s~~dl-vVlvt~~Is~e~~~~L~~~~g~-~v~~V~~i~~p~~~~~~~~~r~~~ty~KL~i~~L~eyd 138 (476)
+.-+++|+.... ++... +++++++-+++..+.+++ .+. .+..+.. + +.. + ....+-...+..+.|
T Consensus 44 l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~~~~~-~~~~~v~~i~~-~-~~~------g---~~~a~n~gi~~a~~d 111 (251)
T cd06439 44 IEAKLENLLALDYPRDRLEIIVVSDGSTDGTAEIARE-YADKGVKLLRF-P-ERR------G---KAAALNRALALATGE 111 (251)
T ss_pred HHHHHHHHHhCcCCCCcEEEEEEECCCCccHHHHHHH-HhhCcEEEEEc-C-CCC------C---hHHHHHHHHHHcCCC
Confidence 446678887653 23213 333455555566666666 322 1222221 1 110 0 112222333344569
Q ss_pred eEEEEcCCeecccC-chhhhc
Q 011823 139 RVVMLDSDNLFLEK-TDELFQ 158 (476)
Q Consensus 139 RVLYLDaD~LVl~n-LdeLFd 158 (476)
-|+++|+|+++..+ +.++.+
T Consensus 112 ~i~~lD~D~~~~~~~l~~l~~ 132 (251)
T cd06439 112 IVVFTDANALLDPDALRLLVR 132 (251)
T ss_pred EEEEEccccCcCHHHHHHHHH
Confidence 99999999999765 555554
No 39
>PRK15383 type III secretion system protein; Provisional
Probab=58.77 E-value=11 Score=37.91 Aligned_cols=47 Identities=21% Similarity=0.298 Sum_probs=36.4
Q ss_pred cCeEEEEcCCeecccCchhhhcCCCeeeeec---CCCCccceEEEEeCCH
Q 011823 137 YDRVVMLDSDNLFLEKTDELFQCGQFCAVFI---NPCIFHTGLFVLQPSE 183 (476)
Q Consensus 137 ydRVLYLDaD~LVl~nLdeLFd~~~~~Aa~d---~P~yFNSGVmvInps~ 183 (476)
-+-++|||+||++.+.+--|+.-|.++.-.+ +.--.-.|.+++|.+.
T Consensus 219 ~~GCIYLD~DMilT~KLG~ly~PDGIavhV~r~~~~~slENg~I~VnRsn 268 (335)
T PRK15383 219 GGGCIYLDADMLLTDKLGTLYLPDGIAIHVSRKDNHVSLENGIIAVNRSE 268 (335)
T ss_pred CCceEEeecceeeecccccEEcCCceEEEEEecCCceecccceEEEccCC
Confidence 5679999999999999999998887766543 3334556888888763
No 40
>PF07801 DUF1647: Protein of unknown function (DUF1647); InterPro: IPR012444 This entry consists of hypothetical proteins of unknown function.
Probab=58.69 E-value=43 Score=30.99 Aligned_cols=63 Identities=10% Similarity=0.167 Sum_probs=46.2
Q ss_pred CCCCeEEEEEEeecCCCCccchHHHHHHHHHHHHhCCCCcEEEEEcCCCCHHHHHHHHhh-CCCEEEEEec
Q 011823 38 QRHKNAYATMMYMGTPRDYEFYVATRVMIRSLVRLHVDADIVVIASLDVPLRWVQALEQE-DGAKVVRVEN 107 (476)
Q Consensus 38 ~~~~~AYvTivy~~t~~dYeyl~ga~VL~~SL~~~ns~~dlvVlvt~~Is~e~~~~L~~~-~g~~v~~V~~ 107 (476)
..+...+||...+ .++.-+.-+++|+++..|+.+++++ +-|++++.++.|++. -+.+++..+.
T Consensus 58 n~~~vvfVSa~S~------~h~~~~~~~i~si~~~~P~~k~ilY-~LgL~~~~i~~L~~~~~n~evr~Fn~ 121 (142)
T PF07801_consen 58 NSSDVVFVSATSD------NHFNESMKSISSIRKFYPNHKIILY-DLGLSEEQIKKLKKNFCNVEVRKFNF 121 (142)
T ss_pred cCCccEEEEEecc------hHHHHHHHHHHHHHHHCCCCcEEEE-eCCCCHHHHHHHHhcCCceEEEECCC
Confidence 4456677777743 2456677899999999999996665 678999999999883 4566655543
No 41
>PRK12671 putative monovalent cation/H+ antiporter subunit G; Reviewed
Probab=57.57 E-value=1.3e+02 Score=27.02 Aligned_cols=95 Identities=16% Similarity=0.094 Sum_probs=60.1
Q ss_pred hHHHHHHHHHHHHHHHHhhhcccchhh----------hhhHHHHHHHHHHhhccccchhHHHHHHHHHHHHhhhhHHHHH
Q 011823 373 AWPLYFLGSFALSTIAINSFFLPILPV----------LAPWLLIFGSLLVMAYPWYSNGVVRALAVFFYAFCSAPIVWVS 442 (476)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (476)
+..+.++|.+..++.++-..++|-++. +--.+-++|+.+.. ...-..-.+|++.+....++.+|..=-.
T Consensus 15 ~~~lll~G~~f~l~gaiGllR~PD~ytRlHAatKa~TlG~~liL~g~~l~~-~~~~~~~~~k~lli~~Fl~lTaPvaaH~ 93 (120)
T PRK12671 15 VAFFLVLGAGLTLIGTIGLVRLKSFYERLHAPTLGTSWGAGGILIASILYF-SVLQSRPVLHEVLIGVFVVVTTPVTLML 93 (120)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcHHHHhhcchhhhhhhHHHHHHHHHHHh-hcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 556677799999999999999995432 11223334433221 1222234779999999999999998877
Q ss_pred HHHhhhhhcccccccccccccCCCCCC
Q 011823 443 LTKVMSCLQVSLEREIFFPRLGESSPP 469 (476)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (476)
+.|..-....+.+++ --|+--||.++
T Consensus 94 iaRAA~~~~~~~~~~-~~~~~~~~~~~ 119 (120)
T PRK12671 94 LSRAALYRDRSEDSS-EKPSALESEQP 119 (120)
T ss_pred HHHHHHHcCCCcccC-CCCCcccccCC
Confidence 777543334444443 44555555543
No 42
>PF04488 Gly_transf_sug: Glycosyltransferase sugar-binding region containing DXD motif ; InterPro: IPR007577 This entry represents those sugar-binding regions of glycosyltransferases that contain a DXD motif. The DXD motif is a short conserved motif found in many families of glycosyltransferases, which add a range of different sugars to other sugars, phosphates and proteins. DXD-containing glycosyltransferases all use nucleoside diphosphate sugars as donors and require divalent cations, usually manganese. The DXD motif is expected to play a carbohydrate binding role in sugar-nucleoside diphosphate and manganese dependent glycosyltransferases [].
Probab=57.39 E-value=6 Score=33.65 Aligned_cols=87 Identities=16% Similarity=0.039 Sum_probs=45.0
Q ss_pred HHHHHHHHhCCCCcEEEEEcCCC----CHHHHHHHHhhCCCEEEEEeccCCcccccccccch--hhhhhHhhhhhhccCc
Q 011823 64 VMIRSLVRLHVDADIVVIASLDV----PLRWVQALEQEDGAKVVRVENLNNPYKDQANFDRR--FKLTLNKLYAWNLVDY 137 (476)
Q Consensus 64 VL~~SL~~~ns~~dlvVlvt~~I----s~e~~~~L~~~~g~~v~~V~~i~~p~~~~~~~~~r--~~~ty~KL~i~~L~ey 137 (476)
-.+.|..++||++.+++..++.. ...+.+.+.+ +.. .+..... ... ...... ..+-+.|+.+-- .
T Consensus 6 ~~i~s~~~~nP~~~~~~~~d~~~~~~~~~~~~~~l~~--~~~--~~~~~~~-~~~-~~~~~~~~~~sD~~R~~~L~---~ 76 (103)
T PF04488_consen 6 CSIESWARHNPDYEYILWTDESDNVRVKRIDIEFLFE--KTP--WFLELYN-KWE-PGRYPNYAHKSDLLRYLVLY---K 76 (103)
T ss_pred HHHHHHHHHCCCCEEEEEECCCcchhhhHHHHHHHHh--CCh--HHHHHHh-hhh-cccccchHHHHHHHHHHHHH---H
Confidence 45789999999999888764433 2223334433 111 0000000 000 000011 124455555422 1
Q ss_pred CeEEEEcCCeecccCc-hhhhcC
Q 011823 138 DRVVMLDSDNLFLEKT-DELFQC 159 (476)
Q Consensus 138 dRVLYLDaD~LVl~nL-deLFd~ 159 (476)
.==+|+|.|+++++++ +++.+.
T Consensus 77 ~GGiY~D~D~~~~rpl~~~~~~~ 99 (103)
T PF04488_consen 77 YGGIYLDLDVICLRPLDDPWLPE 99 (103)
T ss_pred cCcEEEeCccccCcchhhhhhcc
Confidence 1238999999999999 877654
No 43
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=56.77 E-value=1.1e+02 Score=35.17 Aligned_cols=108 Identities=20% Similarity=0.191 Sum_probs=52.9
Q ss_pred CCCeEEEEEEeecCCCCccchH-HHHHHHHHHHHhCCCCcEEE-EEcCCCCHHH-------HHHHHhhC--CCEEEEEec
Q 011823 39 RHKNAYATMMYMGTPRDYEFYV-ATRVMIRSLVRLHVDADIVV-IASLDVPLRW-------VQALEQED--GAKVVRVEN 107 (476)
Q Consensus 39 ~~~~AYvTivy~~t~~dYeyl~-ga~VL~~SL~~~ns~~dlvV-lvt~~Is~e~-------~~~L~~~~--g~~v~~V~~ 107 (476)
..+.+.+-=+| |+|-+.+. .+.++..|+.+.+...++.+ +++|+-+++. .++|++.. +.++.....
T Consensus 123 ~~~VaVliP~y---NEd~~~v~~~L~a~~~Sl~~~~~~~~~e~~vLdD~~d~~~~~~e~~~~~~L~~~~~~~~~i~yr~R 199 (691)
T PRK05454 123 EARTAILMPIY---NEDPARVFAGLRAMYESLAATGHGAHFDFFILSDTRDPDIAAAEEAAWLELRAELGGEGRIFYRRR 199 (691)
T ss_pred CCceEEEEeCC---CCChHHHHHHHHHHHHHHHhcCCCCCEEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCcEEEEEC
Confidence 34444444443 33322233 36678889987655333333 3455544432 22444423 234443333
Q ss_pred cCCcccccccccchhhhhhHhhhhhhccCcCeEEEEcCCeecccC-chhhh
Q 011823 108 LNNPYKDQANFDRRFKLTLNKLYAWNLVDYDRVVMLDSDNLFLEK-TDELF 157 (476)
Q Consensus 108 i~~p~~~~~~~~~r~~~ty~KL~i~~L~eydRVLYLDaD~LVl~n-LdeLF 157 (476)
-.+...+ .+.. ..+.+ .+. .+||-++.||||+++-+| +.++-
T Consensus 200 ~~n~~~K----aGNl-~~~~~--~~~-~~~eyivvLDADs~m~~d~L~~lv 242 (691)
T PRK05454 200 RRNVGRK----AGNI-ADFCR--RWG-GAYDYMVVLDADSLMSGDTLVRLV 242 (691)
T ss_pred CcCCCcc----HHHH-HHHHH--hcC-CCcCEEEEEcCCCCCCHHHHHHHH
Confidence 3222211 0100 11111 111 579999999999999987 45544
No 44
>PRK12585 putative monovalent cation/H+ antiporter subunit G; Reviewed
Probab=56.01 E-value=63 Score=31.42 Aligned_cols=76 Identities=13% Similarity=0.199 Sum_probs=48.6
Q ss_pred chhHHHHHHHHHHHHHHHHhhhcccchhh------hhhHHH----HHHHHHHhhccccchhHHHHHHHHHHHHhhhhHHH
Q 011823 371 LLAWPLYFLGSFALSTIAINSFFLPILPV------LAPWLL----IFGSLLVMAYPWYSNGVVRALAVFFYAFCSAPIVW 440 (476)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (476)
+.|..+.++|++..+..++-.+.+|-++. ..--+| ++|+++.. ....-.-.+|++.+....++.+|..=
T Consensus 7 iI~~vLLliG~~f~ligaIGLlRfPD~YtRLHAATKa~TLGv~LILlgv~l~~-~~~~~~~slklLLiIvFllLTaPVaS 85 (197)
T PRK12585 7 IIISIMILIGGLLSILAAIGVIRLPDVYTRTHAAGISNTFGVSLLLFATVGYF-FHSGEGFNARVLLAVLFIFLTTPVAS 85 (197)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcHHHHhhccccchhhhHHHHHHHHHHHH-HhccchHHHHHHHHHHHHHHHHHHHH
Confidence 45677888899999999999999994321 112223 24433211 11111135799999999999999876
Q ss_pred HHHHHhh
Q 011823 441 VSLTKVM 447 (476)
Q Consensus 441 ~~~~~~~ 447 (476)
-.+.|..
T Consensus 86 HaIARAA 92 (197)
T PRK12585 86 HLINRAA 92 (197)
T ss_pred HHHHHHH
Confidence 6555543
No 45
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=52.43 E-value=74 Score=27.04 Aligned_cols=84 Identities=20% Similarity=0.156 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHhCC-CCcEEEEEcCCCCHHHHHHHHhh--CC-CEEEEEeccCCcccccccccchhhhhhHhhhhhhccC
Q 011823 61 ATRVMIRSLVRLHV-DADIVVIASLDVPLRWVQALEQE--DG-AKVVRVENLNNPYKDQANFDRRFKLTLNKLYAWNLVD 136 (476)
Q Consensus 61 ga~VL~~SL~~~ns-~~dlvVlvt~~Is~e~~~~L~~~--~g-~~v~~V~~i~~p~~~~~~~~~r~~~ty~KL~i~~L~e 136 (476)
.+.-++.|+.+... +.+++| ++++-+++..+.+++. .+ ..++.+..-.+ .. ..-.+-...+..+
T Consensus 11 ~l~~~l~sl~~q~~~~~~iiv-vdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~--~g---------~~~~~n~~~~~~~ 78 (180)
T cd06423 11 VIERTIESLLALDYPKLEVIV-VDDGSTDDTLEILEELAALYIRRVLVVRDKEN--GG---------KAGALNAGLRHAK 78 (180)
T ss_pred HHHHHHHHHHhCCCCceEEEE-EeCCCccchHHHHHHHhccccceEEEEEeccc--CC---------chHHHHHHHHhcC
Confidence 34566788887542 344444 4455555565666552 11 11211111111 00 0111122233347
Q ss_pred cCeEEEEcCCeecccC-chhh
Q 011823 137 YDRVVMLDSDNLFLEK-TDEL 156 (476)
Q Consensus 137 ydRVLYLDaD~LVl~n-LdeL 156 (476)
.|-++++|+|..+..+ +.++
T Consensus 79 ~~~i~~~D~D~~~~~~~l~~~ 99 (180)
T cd06423 79 GDIVVVLDADTILEPDALKRL 99 (180)
T ss_pred CCEEEEECCCCCcChHHHHHH
Confidence 8999999999988765 4444
No 46
>cd02515 Glyco_transf_6 Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens. Glycosyltransferase family 6, GT_6, comprises enzymes with three known activities: alpha-1,3-galactosyltransferase, alpha-1,3 N-acetylgalactosaminyltransferase, and alpha-galactosyltransferase. UDP-galactose:beta-galactosyl alpha-1,3-galactosyltransferase (alpha3GT) catalyzes the transfer of galactose from UDP-alpha-d-galactose into an alpha-1,3 linkage with beta-galactosyl groups in glycoconjugates. The enzyme exists in most mammalian species but is absent from humans, apes, and old world monkeys as a result of the mutational inactivation of the gene. The alpha-1,3 N-acetylgalactosaminyltransferase and alpha-galactosyltransferase are responsible for the production of the human ABO blood group antigens. A N-acetylgalactosaminyltransferases use a UDP-GalNAc donor to convert the H-antigen acceptor to the A antigen, whereas a galactosyltransferase use
Probab=51.39 E-value=1.2e+02 Score=31.07 Aligned_cols=105 Identities=14% Similarity=0.153 Sum_probs=59.4
Q ss_pred hhhhHhhhhhh-------ccCcCeEEEEcCCeecccCch-hhh----cC--CCeeeee-------cCC------------
Q 011823 123 KLTLNKLYAWN-------LVDYDRVVMLDSDNLFLEKTD-ELF----QC--GQFCAVF-------INP------------ 169 (476)
Q Consensus 123 ~~ty~KL~i~~-------L~eydRVLYLDaD~LVl~nLd-eLF----d~--~~~~Aa~-------d~P------------ 169 (476)
..+..|+.++. +.++|=+..+|+|+++.+++. |.+ .. +.+...+ .+|
T Consensus 103 ~~sl~Rm~~~~~~~~~~~~~e~DYlF~~dvd~~F~~~ig~E~Lg~lva~lHp~~y~~~~~~fpYERrp~S~AyIp~~eGd 182 (271)
T cd02515 103 DISMRRMKTLADHIADRIGHEVDYLFCMDVDMVFQGPFGVETLGDSVAQLHPWWYGKPRKQFPYERRPSSAAYIPEGEGD 182 (271)
T ss_pred HHHHHHHHHHHHHHHHhhcccCCEEEEeeCCceEeecCCHHHhhhhheecChhhhcCCCCCCCCcCCCCccccccCCCCC
Confidence 35666666652 248999999999999999875 322 11 0000000 011
Q ss_pred CCccceEEEEeCCHHHHHHHHHHHHh-----CCCCC--CCCchhHHhcccCCCCCCCccCCCCCCCCCCCceeCCccccc
Q 011823 170 CIFHTGLFVLQPSETVFKDMIHELET-----GRENP--DGADQGFIASYFPDLLDKPMFHPSLNGTKLEGHYRLPLGYQM 242 (476)
Q Consensus 170 ~yFNSGVmvInps~~~f~~lle~l~~-----~~~~~--~~~DQDiLN~~f~d~~~~~lf~p~~~~~~ld~~~rLp~~YN~ 242 (476)
-|+.+|+.==.+ ..+-+|.+.+.. ...+. ..+|..=||.||-. ++ ..+-||..|+.
T Consensus 183 fYy~Ga~~GG~~--~~vl~l~~~c~~~i~~D~~n~I~A~wHDESHLNkYf~~--~K-------------p~KiLSPeY~w 245 (271)
T cd02515 183 FYYHGAVFGGSV--EEVYRLTRACHEGILADKANGIEARWHDESHLNKYFLL--HK-------------PTKVLSPEYLW 245 (271)
T ss_pred eEEeeeecCccH--HHHHHHHHHHHHHHHHHHhCCceEEeecHhHhHHHHhh--CC-------------CCeecChhhcC
Confidence 255555542222 223333333211 11222 46899999999876 23 36789999988
Q ss_pred cc
Q 011823 243 DA 244 (476)
Q Consensus 243 ~~ 244 (476)
+.
T Consensus 246 ~e 247 (271)
T cd02515 246 DD 247 (271)
T ss_pred Cc
Confidence 74
No 47
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=48.21 E-value=1e+02 Score=27.94 Aligned_cols=85 Identities=22% Similarity=0.191 Sum_probs=43.5
Q ss_pred HHHHHHHHHHhCC---CCcEEEEEcCCCCHHHHHHHHhhCCCEEEEEeccCCcccccccccchhhhhhHhhhh-hh--cc
Q 011823 62 TRVMIRSLVRLHV---DADIVVIASLDVPLRWVQALEQEDGAKVVRVENLNNPYKDQANFDRRFKLTLNKLYA-WN--LV 135 (476)
Q Consensus 62 a~VL~~SL~~~ns---~~dlvVlvt~~Is~e~~~~L~~~~g~~v~~V~~i~~p~~~~~~~~~r~~~ty~KL~i-~~--L~ 135 (476)
+.-++.|+.+... ++.+ ++++++-++++.+.+++ .+.+++... .+... .+. ...+.-.- .. -.
T Consensus 12 i~~~l~sl~~~~~p~~~~ei-ivvdd~s~D~t~~~~~~-~~~~~~~~~--~~~~~-----gk~--~aln~g~~~a~~~~~ 80 (183)
T cd06438 12 IGNTVRSLKAQDYPRELYRI-FVVADNCTDDTAQVARA-AGATVLERH--DPERR-----GKG--YALDFGFRHLLNLAD 80 (183)
T ss_pred HHHHHHHHHhcCCCCcccEE-EEEeCCCCchHHHHHHH-cCCeEEEeC--CCCCC-----CHH--HHHHHHHHHHHhcCC
Confidence 4456778876532 2233 33456656677777777 666543221 11110 010 11111100 00 13
Q ss_pred CcCeEEEEcCCeecccC-chhhh
Q 011823 136 DYDRVVMLDSDNLFLEK-TDELF 157 (476)
Q Consensus 136 eydRVLYLDaD~LVl~n-LdeLF 157 (476)
++|-|+++|+|..+-.+ +.++.
T Consensus 81 ~~d~v~~~DaD~~~~p~~l~~l~ 103 (183)
T cd06438 81 DPDAVVVFDADNLVDPNALEELN 103 (183)
T ss_pred CCCEEEEEcCCCCCChhHHHHHH
Confidence 59999999999998755 34443
No 48
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=48.14 E-value=2.2e+02 Score=32.15 Aligned_cols=138 Identities=20% Similarity=0.236 Sum_probs=71.7
Q ss_pred hhhhhHHHHHHHHHHHHHHHHh-----------------hhhcCCCCCCCeEEEEEEeecCCCCccc-hHHHHHHHHHHH
Q 011823 9 NASGFWLLRVLFLFYAFVAATT-----------------AAQQRQPQRHKNAYATMMYMGTPRDYEF-YVATRVMIRSLV 70 (476)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~AYvTivy~~t~~dYey-l~ga~VL~~SL~ 70 (476)
.+.-+.|.+++|.-.+.-..+. +.+.+.|+.++-|.+-=.|. +|-.- +-|++++..|+.
T Consensus 96 e~~iL~Lfa~lFcwvs~~F~tAl~GF~~L~~~~~r~~~~~p~~p~p~~hrTAilmPiyn---Ed~~rVfAgLrA~~eSla 172 (736)
T COG2943 96 EAGILVLFAVLFCWVSAGFWTALMGFLVLLFGRDRYLSIAPNEPLPDLHRTAILMPIYN---EDVNRVFAGLRATYESLA 172 (736)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhheeecCCCcCCCCCCCCCCcccceeEEeeccc---cCHHHHHHHHHHHHHHHH
Confidence 3445667777777766655332 22334466777777776654 33222 446889999999
Q ss_pred HhCCCC--cEEEEEcCCCCHH-------HHHHHHhhCC--CEEEEEeccCCcccccccccchhhhhhHhhhhhhccCcCe
Q 011823 71 RLHVDA--DIVVIASLDVPLR-------WVQALEQEDG--AKVVRVENLNNPYKDQANFDRRFKLTLNKLYAWNLVDYDR 139 (476)
Q Consensus 71 ~~ns~~--dlvVlvt~~Is~e-------~~~~L~~~~g--~~v~~V~~i~~p~~~~~~~~~r~~~ty~KL~i~~L~eydR 139 (476)
+++.-. |+.|+ +|.-+++ .-..|++..+ .++..-..-++...+ .+. .+-|.|= |. ..|+.
T Consensus 173 ~Tg~~~~FD~FVL-SDs~dpdialAEq~a~~~l~~e~~g~~~ifYRrRr~n~~RK----aGN-IaDfcrR--wG-~~Y~~ 243 (736)
T COG2943 173 ATGHAEHFDFFVL-SDSRDPDIALAEQKAWAELCRELGGEGNIFYRRRRRNVKRK----AGN-IADFCRR--WG-SAYSY 243 (736)
T ss_pred hhCCcccceEEEE-cCCCCchhhhhHHHHHHHHHHHhCCCCceeeehHhhhhccc----ccC-HHHHHHH--hC-cccce
Confidence 987654 55555 3332222 1123333222 233211111111100 010 1222221 22 57999
Q ss_pred EEEEcCCeecccC-chhhhc
Q 011823 140 VVMLDSDNLFLEK-TDELFQ 158 (476)
Q Consensus 140 VLYLDaD~LVl~n-LdeLFd 158 (476)
.+.||+|.+..++ +..|-+
T Consensus 244 MlVLDADSvMtgd~lvrLv~ 263 (736)
T COG2943 244 MLVLDADSVMTGDCLVRLVR 263 (736)
T ss_pred EEEeecccccCchHHHHHHH
Confidence 9999999998886 444443
No 49
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=46.66 E-value=3.2e+02 Score=29.21 Aligned_cols=84 Identities=12% Similarity=0.015 Sum_probs=42.2
Q ss_pred HHHHHHHHHHhC-CCCcE-EEEEcCCCCHHHHHHHHhh--CCCEEEEEeccCCcccccccccchhhhhhHhhhhhhccCc
Q 011823 62 TRVMIRSLVRLH-VDADI-VVIASLDVPLRWVQALEQE--DGAKVVRVENLNNPYKDQANFDRRFKLTLNKLYAWNLVDY 137 (476)
Q Consensus 62 a~VL~~SL~~~n-s~~dl-vVlvt~~Is~e~~~~L~~~--~g~~v~~V~~i~~p~~~~~~~~~r~~~ty~KL~i~~L~ey 137 (476)
+.-++.|+.+.+ ++..+ +++++++-++++.+.+++. .+.++. +..++.. .. .+...=...+..+.
T Consensus 64 l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~~~~~~~~v~-v~~~~~~-~G---------ka~AlN~gl~~s~g 132 (439)
T TIGR03111 64 LFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRAQNEFPGLS-LRYMNSD-QG---------KAKALNAAIYNSIG 132 (439)
T ss_pred HHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHHHHHhCCCeE-EEEeCCC-CC---------HHHHHHHHHHHccC
Confidence 445678887654 33333 4456676667766665542 222221 1112111 11 01111122233456
Q ss_pred CeEEEEcCCeecccC-chhh
Q 011823 138 DRVVMLDSDNLFLEK-TDEL 156 (476)
Q Consensus 138 dRVLYLDaD~LVl~n-LdeL 156 (476)
|=|+.+|+|.++-.| +.++
T Consensus 133 ~~v~~~DaD~~~~~d~L~~l 152 (439)
T TIGR03111 133 KYIIHIDSDGKLHKDAIKNM 152 (439)
T ss_pred CEEEEECCCCCcChHHHHHH
Confidence 679999999998765 3443
No 50
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=46.22 E-value=59 Score=30.47 Aligned_cols=84 Identities=11% Similarity=0.116 Sum_probs=42.0
Q ss_pred HHHHHHHHHHhCCC-CcE-EEEEcCCCCHHHHHHHHhh--CCCEEEEEeccCCcccccccccchhhhhhHhhhhhhccCc
Q 011823 62 TRVMIRSLVRLHVD-ADI-VVIASLDVPLRWVQALEQE--DGAKVVRVENLNNPYKDQANFDRRFKLTLNKLYAWNLVDY 137 (476)
Q Consensus 62 a~VL~~SL~~~ns~-~dl-vVlvt~~Is~e~~~~L~~~--~g~~v~~V~~i~~p~~~~~~~~~r~~~ty~KL~i~~L~ey 137 (476)
+.-++.|+.+.... .+. +++++++-+++..+.+++. ....+..+ .++... . .-.+-...+..++
T Consensus 15 l~~~l~sl~~q~~~~~~~evivvd~~s~d~~~~~~~~~~~~~~~v~~i---~~~~~~---~------~~a~N~g~~~a~~ 82 (249)
T cd02525 15 IEELLESLLNQSYPKDLIEIIVVDGGSTDGTREIVQEYAAKDPRIRLI---DNPKRI---Q------SAGLNIGIRNSRG 82 (249)
T ss_pred HHHHHHHHHhccCCCCccEEEEEeCCCCccHHHHHHHHHhcCCeEEEE---eCCCCC---c------hHHHHHHHHHhCC
Confidence 44567888765432 232 3334555555555666552 12222222 222110 0 0112223344578
Q ss_pred CeEEEEcCCeecccC-chhhh
Q 011823 138 DRVVMLDSDNLFLEK-TDELF 157 (476)
Q Consensus 138 dRVLYLDaD~LVl~n-LdeLF 157 (476)
|-++++|+|..+..+ +.++.
T Consensus 83 d~v~~lD~D~~~~~~~l~~~~ 103 (249)
T cd02525 83 DIIIRVDAHAVYPKDYILELV 103 (249)
T ss_pred CEEEEECCCccCCHHHHHHHH
Confidence 999999999987654 44444
No 51
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=45.80 E-value=96 Score=27.63 Aligned_cols=83 Identities=13% Similarity=0.045 Sum_probs=43.3
Q ss_pred HHHHHHHHHHhC-CCCcEEEEEcCCCCHHHHHHHHhhCCCEEEEEeccCCcccccccccchhhhhhHhhhhhhccCcCeE
Q 011823 62 TRVMIRSLVRLH-VDADIVVIASLDVPLRWVQALEQEDGAKVVRVENLNNPYKDQANFDRRFKLTLNKLYAWNLVDYDRV 140 (476)
Q Consensus 62 a~VL~~SL~~~n-s~~dlvVlvt~~Is~e~~~~L~~~~g~~v~~V~~i~~p~~~~~~~~~r~~~ty~KL~i~~L~eydRV 140 (476)
+.-++.|+.+.. ++.+ +++++++-+++..+.+++ ...+++.+..-.+ . . ....+-...+..+.|-|
T Consensus 13 l~~~l~sl~~q~~~~~e-vivvDd~s~d~~~~~~~~-~~~~~~~~~~~~~--~-------g--~~~a~n~~~~~a~~~~v 79 (202)
T cd06433 13 LEETIDSVLSQTYPNIE-YIVIDGGSTDGTVDIIKK-YEDKITYWISEPD--K-------G--IYDAMNKGIALATGDII 79 (202)
T ss_pred HHHHHHHHHhCCCCCce-EEEEeCCCCccHHHHHHH-hHhhcEEEEecCC--c-------C--HHHHHHHHHHHcCCCEE
Confidence 445678887643 2333 333455555566667766 3332222221111 1 0 11122223344568899
Q ss_pred EEEcCCeecccC-chhhh
Q 011823 141 VMLDSDNLFLEK-TDELF 157 (476)
Q Consensus 141 LYLDaD~LVl~n-LdeLF 157 (476)
+++|+|..+..+ +.++.
T Consensus 80 ~~ld~D~~~~~~~~~~~~ 97 (202)
T cd06433 80 GFLNSDDTLLPGALLAVV 97 (202)
T ss_pred EEeCCCcccCchHHHHHH
Confidence 999999998766 55544
No 52
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=45.23 E-value=3.5e+02 Score=28.95 Aligned_cols=36 Identities=25% Similarity=0.206 Sum_probs=23.4
Q ss_pred cCcCeEEEEcCCeecccC-chhhh----cCCCeeeeecCCC
Q 011823 135 VDYDRVVMLDSDNLFLEK-TDELF----QCGQFCAVFINPC 170 (476)
Q Consensus 135 ~eydRVLYLDaD~LVl~n-LdeLF----d~~~~~Aa~d~P~ 170 (476)
.++|-++.+|+|.++-.| +.++- +-++.+++..+|.
T Consensus 154 a~~d~iv~lDAD~~~~~d~L~~lv~~~~~~~~~g~v~g~~~ 194 (444)
T PRK14583 154 ARSEYLVCIDGDALLDKNAVPYLVAPLIANPRTGAVTGNPR 194 (444)
T ss_pred CCCCEEEEECCCCCcCHHHHHHHHHHHHhCCCeEEEEccce
Confidence 579999999999998776 33332 2234555544443
No 53
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=44.68 E-value=1.6e+02 Score=26.09 Aligned_cols=86 Identities=10% Similarity=0.101 Sum_probs=43.9
Q ss_pred HHHHHHHHHHhC-CCCcEEEEEcCCCCHHHHHHHHhh---CCCEEEEEeccCCcccccccccchhhhhhHhhhhhhccCc
Q 011823 62 TRVMIRSLVRLH-VDADIVVIASLDVPLRWVQALEQE---DGAKVVRVENLNNPYKDQANFDRRFKLTLNKLYAWNLVDY 137 (476)
Q Consensus 62 a~VL~~SL~~~n-s~~dlvVlvt~~Is~e~~~~L~~~---~g~~v~~V~~i~~p~~~~~~~~~r~~~ty~KL~i~~L~ey 137 (476)
+.-++.|+.+.. ++..++| ++++-+++..+.+++. ...+++.+.. .+. .+.....+-...+..+.
T Consensus 12 l~~~l~sl~~q~~~~~eiiv-vdd~s~d~t~~~~~~~~~~~~~~~~~~~~--~~~--------~~~~~~~~n~g~~~a~g 80 (182)
T cd06420 12 LELVLKSVLNQSILPFEVII-ADDGSTEETKELIEEFKSQFPIPIKHVWQ--EDE--------GFRKAKIRNKAIAAAKG 80 (182)
T ss_pred HHHHHHHHHhccCCCCEEEE-EeCCCchhHHHHHHHHHhhcCCceEEEEc--CCc--------chhHHHHHHHHHHHhcC
Confidence 456678887653 3344443 4454455555555542 1222322211 110 11111222234455678
Q ss_pred CeEEEEcCCeecccC-chhhhc
Q 011823 138 DRVVMLDSDNLFLEK-TDELFQ 158 (476)
Q Consensus 138 dRVLYLDaD~LVl~n-LdeLFd 158 (476)
|-+++||+|.++..+ +..+.+
T Consensus 81 ~~i~~lD~D~~~~~~~l~~~~~ 102 (182)
T cd06420 81 DYLIFIDGDCIPHPDFIADHIE 102 (182)
T ss_pred CEEEEEcCCcccCHHHHHHHHH
Confidence 999999999988765 444443
No 54
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=43.21 E-value=1.8e+02 Score=30.49 Aligned_cols=21 Identities=19% Similarity=0.172 Sum_probs=16.6
Q ss_pred cCeEEEEcCCeecccC-chhhh
Q 011823 137 YDRVVMLDSDNLFLEK-TDELF 157 (476)
Q Consensus 137 ydRVLYLDaD~LVl~n-LdeLF 157 (476)
.|-++++|+|+.+-.+ +.++.
T Consensus 134 gd~llflDaD~~~~p~~l~~lv 155 (384)
T TIGR03469 134 ADYLLLTDADIAHGPDNLARLV 155 (384)
T ss_pred CCEEEEECCCCCCChhHHHHHH
Confidence 8999999999998655 45554
No 55
>PRK12586 putative monovalent cation/H+ antiporter subunit G; Reviewed
Probab=41.86 E-value=1.2e+02 Score=28.19 Aligned_cols=76 Identities=20% Similarity=0.177 Sum_probs=52.0
Q ss_pred chhHHHHHHHHHHHHHHHHhhhcccchhh----------hhhHHHHHHHHHHhhccccchhHHHHHHHHHHHHhhhhHHH
Q 011823 371 LLAWPLYFLGSFALSTIAINSFFLPILPV----------LAPWLLIFGSLLVMAYPWYSNGVVRALAVFFYAFCSAPIVW 440 (476)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (476)
+.|..+.++|++..++.++-.+++|-++. +--++-.+|+.+... ..-....+|++.+....++.+|..=
T Consensus 10 il~~ill~lG~~f~ligaIGllRfPD~ytRlHAatKa~TlG~~liLlg~~l~~~-~~~~~~~~k~lLii~fl~lTaPVaa 88 (145)
T PRK12586 10 LIAAIMILLGSIIALISAIGIVKFQDVFLRSHAATKSSTLSVLLTLIGVLIYFI-VNTGFFSVRLLLSLVFINLTSPVGM 88 (145)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcHHHHccccccchhhHHHHHHHHHHHHHh-cccchHHHHHHHHHHHHHHHHHHHH
Confidence 45677888899999999999999994431 222333345444321 1111247899999999999999877
Q ss_pred HHHHHhh
Q 011823 441 VSLTKVM 447 (476)
Q Consensus 441 ~~~~~~~ 447 (476)
-.+.|..
T Consensus 89 h~iaRAa 95 (145)
T PRK12586 89 HLIARAA 95 (145)
T ss_pred HHHHHHH
Confidence 6666654
No 56
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=41.03 E-value=2.8e+02 Score=25.59 Aligned_cols=82 Identities=17% Similarity=0.113 Sum_probs=41.1
Q ss_pred HHHHHHHHHHhCCCC-cE-EEEEcCCCCHHHHHHHHhhCCCEEEEEeccCCcccccccccchhhhhhHhhhhhhccCcCe
Q 011823 62 TRVMIRSLVRLHVDA-DI-VVIASLDVPLRWVQALEQEDGAKVVRVENLNNPYKDQANFDRRFKLTLNKLYAWNLVDYDR 139 (476)
Q Consensus 62 a~VL~~SL~~~ns~~-dl-vVlvt~~Is~e~~~~L~~~~g~~v~~V~~i~~p~~~~~~~~~r~~~ty~KL~i~~L~eydR 139 (476)
+.-++.|+....-.. .+ +++++++-+++..+.+++ .+.+. .+..+..+.. ... ..-..-...+..++|-
T Consensus 17 l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~-~~~~~-~~~~~~~~~~------~~~-~~~~~n~~~~~a~~d~ 87 (234)
T cd06421 17 VRKTLRAALAIDYPHDKLRVYVLDDGRRPELRALAAE-LGVEY-GYRYLTRPDN------RHA-KAGNLNNALAHTTGDF 87 (234)
T ss_pred HHHHHHHHHhcCCCcccEEEEEEcCCCchhHHHHHHH-hhccc-CceEEEeCCC------CCC-cHHHHHHHHHhCCCCE
Confidence 445678887643222 12 334566656667777776 33211 1111111100 000 0011122333457999
Q ss_pred EEEEcCCeecccC
Q 011823 140 VVMLDSDNLFLEK 152 (476)
Q Consensus 140 VLYLDaD~LVl~n 152 (476)
++++|+|..+-.+
T Consensus 88 i~~lD~D~~~~~~ 100 (234)
T cd06421 88 VAILDADHVPTPD 100 (234)
T ss_pred EEEEccccCcCcc
Confidence 9999999998665
No 57
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=40.79 E-value=2.7e+02 Score=25.94 Aligned_cols=83 Identities=25% Similarity=0.348 Sum_probs=44.1
Q ss_pred HHHHHHHHHHhCCCCcEEEEEcCCCCHHHHHHHHhh-CCCEEEEEeccCCcccccccccchhhhhhHhhhhhhccCcCeE
Q 011823 62 TRVMIRSLVRLHVDADIVVIASLDVPLRWVQALEQE-DGAKVVRVENLNNPYKDQANFDRRFKLTLNKLYAWNLVDYDRV 140 (476)
Q Consensus 62 a~VL~~SL~~~ns~~dlvVlvt~~Is~e~~~~L~~~-~g~~v~~V~~i~~p~~~~~~~~~r~~~ty~KL~i~~L~eydRV 140 (476)
+.-++.|+.+.. ..+++| ++++-+++..+.+++. ....+. +..-++. . +. ...+ ...+..+.|-|
T Consensus 16 l~~~l~sl~~q~-~~eiiv-vdd~s~d~~~~~l~~~~~~~~~~-v~~~~~~--g-----~~--~a~n--~g~~~a~~d~v 81 (235)
T cd06434 16 FRECLRSILRQK-PLEIIV-VTDGDDEPYLSILSQTVKYGGIF-VITVPHP--G-----KR--RALA--EGIRHVTTDIV 81 (235)
T ss_pred HHHHHHHHHhCC-CCEEEE-EeCCCChHHHHHHHhhccCCcEE-EEecCCC--C-----hH--HHHH--HHHHHhCCCEE
Confidence 445678887765 445444 4555566666665332 122221 1111111 0 00 1111 22334579999
Q ss_pred EEEcCCeecccC-chhhhc
Q 011823 141 VMLDSDNLFLEK-TDELFQ 158 (476)
Q Consensus 141 LYLDaD~LVl~n-LdeLFd 158 (476)
+++|+|+.+..+ +.++.+
T Consensus 82 ~~lD~D~~~~~~~l~~l~~ 100 (235)
T cd06434 82 VLLDSDTVWPPNALPEMLK 100 (235)
T ss_pred EEECCCceeChhHHHHHHH
Confidence 999999999987 555553
No 58
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=40.23 E-value=81 Score=31.48 Aligned_cols=88 Identities=16% Similarity=0.211 Sum_probs=47.6
Q ss_pred HHHHHHHHHHhCCCCcEEEE-EcCCCCHHHHHHHHhh---CCCEEEEEeccCCcccccccccchhhhhhHhhhhhhccCc
Q 011823 62 TRVMIRSLVRLHVDADIVVI-ASLDVPLRWVQALEQE---DGAKVVRVENLNNPYKDQANFDRRFKLTLNKLYAWNLVDY 137 (476)
Q Consensus 62 a~VL~~SL~~~ns~~dlvVl-vt~~Is~e~~~~L~~~---~g~~v~~V~~i~~p~~~~~~~~~r~~~ty~KL~i~~L~ey 137 (476)
+.-.+.|+....++.++.++ ++++-+++..+.+++. .+... .+..-. + ...+..+-.|=...+..+-
T Consensus 19 l~~~l~~l~~~~~~~~~eiIvvd~~s~~~~~~~l~~~~~~~~~~~-~i~~~~-~-------~~~f~~a~arN~g~~~A~~ 89 (281)
T PF10111_consen 19 LRNCLESLSQFQSDPDFEIIVVDDGSSDEFDEELKKLCEKNGFIR-YIRHED-N-------GEPFSRAKARNIGAKYARG 89 (281)
T ss_pred HHHHHHHHHhcCCCCCEEEEEEECCCchhHHHHHHHHHhccCceE-EEEcCC-C-------CCCcCHHHHHHHHHHHcCC
Confidence 44557788776666666555 4444444433444432 33331 121111 0 0112223334344455689
Q ss_pred CeEEEEcCCeecccC-chhhhc
Q 011823 138 DRVVMLDSDNLFLEK-TDELFQ 158 (476)
Q Consensus 138 dRVLYLDaD~LVl~n-LdeLFd 158 (476)
|-|+++|+|+++-.+ ++.+.+
T Consensus 90 d~l~flD~D~i~~~~~i~~~~~ 111 (281)
T PF10111_consen 90 DYLIFLDADCIPSPDFIEKLLN 111 (281)
T ss_pred CEEEEEcCCeeeCHHHHHHHHH
Confidence 999999999999866 555555
No 59
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=39.95 E-value=1.7e+02 Score=26.95 Aligned_cols=26 Identities=15% Similarity=0.127 Sum_probs=19.1
Q ss_pred hccCcCeEEEEcCCeecccC-chhhhc
Q 011823 133 NLVDYDRVVMLDSDNLFLEK-TDELFQ 158 (476)
Q Consensus 133 ~L~eydRVLYLDaD~LVl~n-LdeLFd 158 (476)
+....|-|+++|+|.++..+ ++.+.+
T Consensus 79 ~~~~~d~i~~~D~D~~~~~~~l~~l~~ 105 (229)
T cd04192 79 KAAKGDWIVTTDADCVVPSNWLLTFVA 105 (229)
T ss_pred HHhcCCEEEEECCCcccCHHHHHHHHH
Confidence 44578999999999988765 444443
No 60
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=39.42 E-value=2e+02 Score=27.71 Aligned_cols=21 Identities=29% Similarity=0.857 Sum_probs=10.1
Q ss_pred ccCccCcch-hHHHHHHHHHHH
Q 011823 364 VPSTLHPLL-AWPLYFLGSFAL 384 (476)
Q Consensus 364 ~p~~~~p~~-~~~~~~~~~~~~ 384 (476)
+|..+.|.. +|...++|..++
T Consensus 170 lp~~inp~l~~~~~iiig~i~~ 191 (206)
T PF06570_consen 170 LPPVINPVLPPWVYIIIGVIAF 191 (206)
T ss_pred ccccCCcCCCHHHHHHHHHHHH
Confidence 455555444 444444454443
No 61
>PF03414 Glyco_transf_6: Glycosyltransferase family 6; InterPro: IPR005076 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 6 GT6 from CAZY comprises enzymes with three known activities; alpha-1,3-galactosyltransferase (2.4.1.151 from EC); alpha-1,3 N-acetylgalactosaminyltransferase (2.4.1.40 from EC); alpha-galactosyltransferase (2.4.1.37 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0016020 membrane; PDB: 2Y7A_B 2O1G_A 1R82_A 2RJ1_A 3IOJ_B 2RJ4_A 3I0C_A 3SX8_A 1ZJ1_A 3I0E_A ....
Probab=39.27 E-value=1.8e+02 Score=30.63 Aligned_cols=110 Identities=17% Similarity=0.305 Sum_probs=58.9
Q ss_pred chhh-hhhHhhhhhh-------ccCcCeEEEEcCCeecccCchhhhcCCCeeeee---------------cCC-------
Q 011823 120 RRFK-LTLNKLYAWN-------LVDYDRVVMLDSDNLFLEKTDELFQCGQFCAVF---------------INP------- 169 (476)
Q Consensus 120 ~r~~-~ty~KL~i~~-------L~eydRVLYLDaD~LVl~nLdeLFd~~~~~Aa~---------------d~P------- 169 (476)
+||. .+..|+.+.. +.|+|-+..+|+|+++.+++.. -.++...|.. .+|
T Consensus 164 ~~Wqd~sm~Rm~~i~~~i~~~~~~EvDYLFc~dvd~~F~~~vGv-E~Lg~lva~LHp~~y~~~~~~FpYERrp~S~AyIp 242 (337)
T PF03414_consen 164 KRWQDISMMRMEMISEHIEQHIQHEVDYLFCMDVDMVFQDHVGV-EILGDLVATLHPWFYFKPRESFPYERRPKSQAYIP 242 (337)
T ss_dssp SSHHHHHHHHHHHHHHHHHHCHHHH-SEEEEEESSEEE-S-B-G-GG-SSEEEEESTTTTTSTGGGS--B-STTSTTB--
T ss_pred CCCccchhHHHHHHHHHHHHHHhhcCCEEEEEecceEEecccCH-HHHHHHHHHhCHHHHCCChhhCccccCcccccccc
Confidence 4553 5666666554 2579999999999999987663 1112222221 011
Q ss_pred -----CCccceEEEEeCC------HHHHHHHHHHHHhCCCCCCCCchhHHhcccCCCCCCCccCCCCCCCCCCCceeCCc
Q 011823 170 -----CIFHTGLFVLQPS------ETVFKDMIHELETGRENPDGADQGFIASYFPDLLDKPMFHPSLNGTKLEGHYRLPL 238 (476)
Q Consensus 170 -----~yFNSGVmvInps------~~~f~~lle~l~~~~~~~~~~DQDiLN~~f~d~~~~~lf~p~~~~~~ld~~~rLp~ 238 (476)
-|+.+|++==.+. +...+.|++..+++ -.-..+|..=||.||-. ++ ..+-||.
T Consensus 243 ~~eGDfYY~ga~fGGt~~~vl~Lt~~c~~~i~~D~~n~-I~A~WhDESHLNKYfl~--~K-------------PtKvLSP 306 (337)
T PF03414_consen 243 YGEGDFYYHGAFFGGTVEEVLRLTEACHQGIMQDKANG-IEALWHDESHLNKYFLY--HK-------------PTKVLSP 306 (337)
T ss_dssp TT--S--EECCEEEECHHHHHHHHHHHHHHHHHHHHTT----TTCHHHHHHHHHHH--S---------------SEEE-G
T ss_pred CCCCCeEEeceecCCcHHHHHHHHHHHHHHHHhhhhcC-ceEeccchhhhHHHHhh--CC-------------CceecCH
Confidence 2667776643332 23334444444332 12256899999998854 23 3578999
Q ss_pred cccccchh
Q 011823 239 GYQMDASY 246 (476)
Q Consensus 239 ~YN~~~~~ 246 (476)
.|+.+...
T Consensus 307 EY~Wd~~~ 314 (337)
T PF03414_consen 307 EYCWDERF 314 (337)
T ss_dssp GGSBSHHH
T ss_pred HHccCccC
Confidence 99988643
No 62
>PRK13735 conjugal transfer mating pair stabilization protein TraG; Provisional
Probab=37.88 E-value=64 Score=38.45 Aligned_cols=81 Identities=15% Similarity=0.112 Sum_probs=44.2
Q ss_pred HhhceeeccC-ccCcchhHHHHHH--HHHHHHHHHHhhhcccchhhhhhHHHHHHHHHHhhccccchhH----HHHHHHH
Q 011823 357 YIMPFFLVPS-TLHPLLAWPLYFL--GSFALSTIAINSFFLPILPVLAPWLLIFGSLLVMAYPWYSNGV----VRALAVF 429 (476)
Q Consensus 357 ~~~~f~~~p~-~~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 429 (476)
.+++..++|. ++--+.||...++ ++.-.+-.+||.|+ +.+..--|+=++++. -|+| .+...++
T Consensus 342 lV~llallp~~g~~vLkgY~~~~iwLqlWppLfAIIN~~m-------~~~~~~~G~~~tLs~---~~~i~~~~sdia~~a 411 (942)
T PRK13735 342 LLVLAAVFNKLTLSVLKGYVFALMWLQSWPLLYAILNSAM-------TFYAKQNGAPVVLSE---LSQIQLKYSDLASTA 411 (942)
T ss_pred HHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHhhcCccccchh---hhHHHHHHHHHHHHH
Confidence 4444455554 3444445544333 44455556666652 222211222222321 2333 5666899
Q ss_pred HHHHhhhhHHHHHHHHhh
Q 011823 430 FYAFCSAPIVWVSLTKVM 447 (476)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~ 447 (476)
+|..++.|+|=+.++|=.
T Consensus 412 GyL~msIP~LA~~ivkG~ 429 (942)
T PRK13735 412 GYLSMMIPPLSWGMVKGL 429 (942)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999988888753
No 63
>PRK11056 hypothetical protein; Provisional
Probab=36.73 E-value=31 Score=30.93 Aligned_cols=37 Identities=32% Similarity=0.434 Sum_probs=28.1
Q ss_pred cchhHHHHHHHHHHHHHHH--------HhhhcccchhhhhhHHHH
Q 011823 370 PLLAWPLYFLGSFALSTIA--------INSFFLPILPVLAPWLLI 406 (476)
Q Consensus 370 p~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~ 406 (476)
|..+|..|++|.|.++.++ .|.|-.=+--+|..|+|.
T Consensus 65 P~~a~acFflG~f~ySA~vraeyPeiGSNF~p~il~~~L~~Wi~~ 109 (120)
T PRK11056 65 PGLAAACFFLGVFLYSAFVRAEYPEIGSNFFPAVLSVILVFWIGR 109 (120)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCcccccchHHHHHHHHHHHHHHH
Confidence 6779999999999999886 344433355677888875
No 64
>PRK12675 putative monovalent cation/H+ antiporter subunit G; Reviewed
Probab=36.61 E-value=1.8e+02 Score=25.55 Aligned_cols=74 Identities=12% Similarity=-0.005 Sum_probs=49.6
Q ss_pred hhHHHHHHHHHHHHHHHHhhhcccchhh------hhhHHH----HHHHHHHhhccccchhHHHHHHHHHHHHhhhhHHHH
Q 011823 372 LAWPLYFLGSFALSTIAINSFFLPILPV------LAPWLL----IFGSLLVMAYPWYSNGVVRALAVFFYAFCSAPIVWV 441 (476)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (476)
.|+.+.++|++..++.++-.+++|-++- ..--+| ++|+.+. ++.-..-..|.+.+....++.+|..=-
T Consensus 2 i~~~lll~G~~f~l~g~iGllR~PD~ytRlHAatk~~TlG~~lil~g~~l~--~~~~~~~~~k~lli~~f~~lt~Pvaah 79 (104)
T PRK12675 2 IELLFLLFGYSIMFFGALGLLRFPDVYTRLHAATKCDTGGAMGIILALALA--SDASLLIKLKFLVLAFLIAMINPMVSH 79 (104)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcHHHHhhhchhhhhhhHHHHHHHHHHH--hcchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 4678888999999999999999995431 122233 3443332 221112356999999999999998766
Q ss_pred HHHHhh
Q 011823 442 SLTKVM 447 (476)
Q Consensus 442 ~~~~~~ 447 (476)
.+.|-.
T Consensus 80 ~iaraa 85 (104)
T PRK12675 80 AIARGA 85 (104)
T ss_pred HHHHHH
Confidence 665543
No 65
>KOG1950 consensus Glycosyl transferase, family 8 - glycogenin [Carbohydrate transport and metabolism]
Probab=36.01 E-value=14 Score=38.85 Aligned_cols=246 Identities=17% Similarity=0.106 Sum_probs=121.5
Q ss_pred hhhHhhhhhhccCcCeEEEEcCCeecccCchhhhcCCCe--eeeec-CCCCccc-------eEEEEeCCHHHHHHHHHHH
Q 011823 124 LTLNKLYAWNLVDYDRVVMLDSDNLFLEKTDELFQCGQF--CAVFI-NPCIFHT-------GLFVLQPSETVFKDMIHEL 193 (476)
Q Consensus 124 ~ty~KL~i~~L~eydRVLYLDaD~LVl~nLdeLFd~~~~--~Aa~d-~P~yFNS-------GVmvInps~~~f~~lle~l 193 (476)
..+.++.+|++.++.+.+|+|.|+-..++.++.|+.... .+... ..--+.+ |...++.+...++++-+.
T Consensus 112 ~~~~~~~~~~~~~~~a~i~~~~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~f~~~~~~- 190 (369)
T KOG1950|consen 112 LRDDKIKIWRLIEDGAAIYLVDDIQRFRNDDANFDVPNELNYAKLYMFQLDFYSKLVKIDADDCILKNDDLLFSNWPDL- 190 (369)
T ss_pred ecccceeecceeccCceEEEecchhhccCccccccccchhcccccceeeecccccceEEeccchhcCChhhhhhhchhh-
Confidence 347788999999999999999999999999999998631 11111 1111122 222222221122211111
Q ss_pred HhCCCCCCCCchhHHhcccCCCCCCCccCCCCCCCCCCCceeCCccccccchhcccccccCCCCCCCeEEEeeCCCCCCC
Q 011823 194 ETGRENPDGADQGFIASYFPDLLDKPMFHPSLNGTKLEGHYRLPLGYQMDASYYYLRLRWSVPCGPNSVITFPGAPWLKP 273 (476)
Q Consensus 194 ~~~~~~~~~~DQDiLN~~f~d~~~~~lf~p~~~~~~ld~~~rLp~~YN~~~~~~yl~~~w~~~~~~~~IIHFtg~p~~KP 273 (476)
.+-.+|...|.- +.....|...|+..-+......-.....+-.+.|+.+. .+|
T Consensus 191 ---------~~~~~l~~~~n~----------------~~~v~~ps~~~~~~~~~~~~~~~~~~~~~q~~l~~~f~--~~~ 243 (369)
T KOG1950|consen 191 ---------FATNILPLIFNS----------------GLLVFEPSLCNYKDLMEFSEEFESYNGADQGFLHLIFS--WIP 243 (369)
T ss_pred ---------ccCCCccceecc----------------CccccCCCccchhhHHHhhcccCCCCCccchhhHHHhh--ccc
Confidence 111222222211 01233333333322100000000001233478899887 677
Q ss_pred CcccccCcccchhhhHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHhhcCCCCccccccCCCchhHHHHHHHHHHHHHH
Q 011823 274 WYWWSWPVLPLGIEWHKHRLQTLGYSAEMTMVIIQAVIYLGMIAVTRLAKPNMPKLCYRRSDKSISIIQTGLKLVAVWSI 353 (476)
Q Consensus 274 W~~ws~p~~~l~~~W~~~r~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~k~~~~~~~~~~~~~~~~~ 353 (476)
|.--....+.++..|.+.. ...+....+ .......|.+.. ++..|+|.-+++-.-.+...+-+-....
T Consensus 244 ~~~~~~~n~~~~~~~~~p~--~~~l~~~~~-~~~~~~~y~~~~---------~p~~~~~~~~~n~~~~~~~~~~~~~~~~ 311 (369)
T KOG1950|consen 244 DRPPPSVNLNLAKLWRHPK--KNDLSRASS-VLRYALHYLGAN---------KPELCYRDFDCNLDGDEFPRKDIDSLHK 311 (369)
T ss_pred CCCcccccccccccccCcc--ccchhhccc-ccchhhhccccC---------CCCccccCcccccccccccchhHHHHHh
Confidence 7432222455555565441 113333222 222223333322 5556665433222110100111100000
Q ss_pred HHHHhhceeeccCccCcchhHHHHHHHHHHHHHHHHhhhcccchhhhhhHHHHHHHHHHhhccccchhHHHHHHHHHHH
Q 011823 354 LASYIMPFFLVPSTLHPLLAWPLYFLGSFALSTIAINSFFLPILPVLAPWLLIFGSLLVMAYPWYSNGVVRALAVFFYA 432 (476)
Q Consensus 354 ~~~~~~~f~~~p~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (476)
- +|-+|--.+..+... ..++... -+.|-++-+..-.++.+|.+.++-+..--+.+.
T Consensus 312 ~------------------~w~~~~~~~~~~~~~----~~~~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (369)
T KOG1950|consen 312 K------------------WWDVYDDMSLDLKVH----CKLWAKE-STEYPLVRPQAELAAFPEEHDKIDYKAPRAFKA 367 (369)
T ss_pred c------------------cchhhccCchhhhhc----ccccccc-ccccchhhchhHHhhcccccccccccCchhhhc
Confidence 0 899998888877765 3334444 678888888999999999999888765555544
No 66
>PF07226 DUF1422: Protein of unknown function (DUF1422); InterPro: IPR009867 This family consists of several hypothetical bacterial proteins of around 120 residues in length. The function of this family is unknown.
Probab=34.91 E-value=39 Score=30.19 Aligned_cols=37 Identities=32% Similarity=0.487 Sum_probs=28.6
Q ss_pred cchhHHHHHHHHHHHHHHH--------HhhhcccchhhhhhHHHH
Q 011823 370 PLLAWPLYFLGSFALSTIA--------INSFFLPILPVLAPWLLI 406 (476)
Q Consensus 370 p~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~ 406 (476)
|..||..|++|.|.++.++ -|.|-.=+.-+|..|++.
T Consensus 65 P~~a~acFflG~f~ySA~vraqyPeiGSNFfp~il~l~L~~Wi~~ 109 (117)
T PF07226_consen 65 PKLALACFFLGLFGYSAFVRAQYPEIGSNFFPSILCLILVFWIGY 109 (117)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhchhhhhhHHHHHHHHHHHHHHHH
Confidence 7779999999999999876 344444466678888876
No 67
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=34.29 E-value=2.1e+02 Score=28.46 Aligned_cols=25 Identities=24% Similarity=0.161 Sum_probs=19.7
Q ss_pred ccCcCeEEEEcCCeecccC-chhhhc
Q 011823 134 LVDYDRVVMLDSDNLFLEK-TDELFQ 158 (476)
Q Consensus 134 L~eydRVLYLDaD~LVl~n-LdeLFd 158 (476)
....|-|++||+|+.+..+ |++|.+
T Consensus 81 ~A~gd~i~fLD~D~~~~~~wL~~ll~ 106 (299)
T cd02510 81 AATGDVLVFLDSHCEVNVGWLEPLLA 106 (299)
T ss_pred HccCCEEEEEeCCcccCccHHHHHHH
Confidence 4568999999999999765 566654
No 68
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=34.13 E-value=5.4e+02 Score=30.61 Aligned_cols=64 Identities=14% Similarity=0.104 Sum_probs=35.3
Q ss_pred cEEE-EEcCCCCHHHHHHHHhhCCCEEEEEeccCCcccccccccchhhhhhHhhhhhhccCcCeEEEEcCCeecccCc
Q 011823 77 DIVV-IASLDVPLRWVQALEQEDGAKVVRVENLNNPYKDQANFDRRFKLTLNKLYAWNLVDYDRVVMLDSDNLFLEKT 153 (476)
Q Consensus 77 dlvV-lvt~~Is~e~~~~L~~~~g~~v~~V~~i~~p~~~~~~~~~r~~~ty~KL~i~~L~eydRVLYLDaD~LVl~nL 153 (476)
++-| +++|+-+++..+..++ .|++.+..+ ++...+ . .+.+ ...+..+.|=|+.+|||.++.+|.
T Consensus 292 k~EViVVDDgS~D~t~~la~~-~~v~yI~R~--~n~~gK----A----GnLN--~aL~~a~GEyIavlDAD~ip~pdf 356 (852)
T PRK11498 292 KLNIWILDDGGREEFRQFAQE-VGVKYIARP--THEHAK----A----GNIN--NALKYAKGEFVAIFDCDHVPTRSF 356 (852)
T ss_pred ceEEEEEeCCCChHHHHHHHH-CCcEEEEeC--CCCcch----H----HHHH--HHHHhCCCCEEEEECCCCCCChHH
Confidence 3434 4566666777666666 676553221 111110 0 1111 112235789999999999998773
No 69
>PRK12672 putative monovalent cation/H+ antiporter subunit G; Reviewed
Probab=33.97 E-value=2e+02 Score=25.73 Aligned_cols=77 Identities=9% Similarity=0.126 Sum_probs=52.6
Q ss_pred chhHHHHHHHHHHHHHHHHhhhcccchh----------hhhhHHHHHHHHHHhhccc-------cchhHHHHHHHHHHHH
Q 011823 371 LLAWPLYFLGSFALSTIAINSFFLPILP----------VLAPWLLIFGSLLVMAYPW-------YSNGVVRALAVFFYAF 433 (476)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 433 (476)
..+..+.++|.+..++.++-.+++|-++ .+--++-.+|+.+.....+ +..-.+|.+.+....+
T Consensus 5 ~l~~ill~~G~~f~l~gaiGllR~PD~ytRlHAatk~~TlG~~lil~g~~l~~~~~~~~~~~~~~~~~~~k~lli~~f~~ 84 (118)
T PRK12672 5 YLIYIFLAIGVTFNLLGSIALHRFPDVYTRLHGATKCTTFGTIFAVLAVVTHALYRLRLTGDPKYLQMALHSFVALIALL 84 (118)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCccHHHHhhhchhhhHhHHHHHHHHHHHHHhhhhccccchhhHHHHHHHHHHHHHHH
Confidence 3467788889999999999999999543 2223333455554332211 1124679999999999
Q ss_pred hhhhHHHHHHHHhh
Q 011823 434 CSAPIVWVSLTKVM 447 (476)
Q Consensus 434 ~~~~~~~~~~~~~~ 447 (476)
+.+|..=-.+.|..
T Consensus 85 lT~Pvaah~iaRAA 98 (118)
T PRK12672 85 LTNPVGAHAIARAA 98 (118)
T ss_pred HHHHHHHHHHHHHH
Confidence 99998766666654
No 70
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=33.24 E-value=2.5e+02 Score=25.42 Aligned_cols=28 Identities=25% Similarity=0.455 Sum_probs=20.9
Q ss_pred hhccCcCeEEEEcCCeecccC-chhhhcC
Q 011823 132 WNLVDYDRVVMLDSDNLFLEK-TDELFQC 159 (476)
Q Consensus 132 ~~L~eydRVLYLDaD~LVl~n-LdeLFd~ 159 (476)
....+.|-|+++|+|.....+ +..+.+.
T Consensus 75 ~~~~~g~~v~~ld~Dd~~~~~~l~~~~~~ 103 (214)
T cd04196 75 LQAADGDYVFFCDQDDIWLPDKLERLLKA 103 (214)
T ss_pred HHhCCCCEEEEECCCcccChhHHHHHHHH
Confidence 345679999999999887766 6666653
No 71
>PF09680 Tiny_TM_bacill: Protein of unknown function (Tiny_TM_bacill); InterPro: IPR010070 This entry represents a family of hypothetical proteins, half of which are 40 residues or less in length. Members are found only in spore-forming species. A Gly-rich variable region is followed by a strongly conserved, highly hydrophobic region, predicted to form a transmembrane helix, ending with an invariant Gly. The consensus for this stretch is FALLVVFILLIIV.
Probab=32.77 E-value=36 Score=22.17 Aligned_cols=19 Identities=47% Similarity=0.758 Sum_probs=16.1
Q ss_pred hhhhHHHHHHHHHHHHHHH
Q 011823 10 ASGFWLLRVLFLFYAFVAA 28 (476)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~ 28 (476)
..|+.|+.|+|.+..++-+
T Consensus 3 ~~~FalivVLFILLiIvG~ 21 (24)
T PF09680_consen 3 GSGFALIVVLFILLIIVGA 21 (24)
T ss_pred CccchhHHHHHHHHHHhcc
Confidence 4689999999999988764
No 72
>PF03314 DUF273: Protein of unknown function, DUF273; InterPro: IPR004988 This is a family of proteins of unknown function.
Probab=32.47 E-value=1.2e+02 Score=30.09 Aligned_cols=79 Identities=19% Similarity=0.319 Sum_probs=47.8
Q ss_pred ccCcCeEEEEcCCeecccC---chhhhcCCCeeeee-c-C-CCCccceEEEEeCCHHHHHHHHHHHHh----CCCCCCCC
Q 011823 134 LVDYDRVVMLDSDNLFLEK---TDELFQCGQFCAVF-I-N-PCIFHTGLFVLQPSETVFKDMIHELET----GRENPDGA 203 (476)
Q Consensus 134 L~eydRVLYLDaD~LVl~n---LdeLFd~~~~~Aa~-d-~-P~yFNSGVmvInps~~~f~~lle~l~~----~~~~~~~~ 203 (476)
|.++|-|++||+|+-|+.+ |.|..+-+ +-... | . ..-..+|--+++.+...-+=+.+ .++ .+.++.+.
T Consensus 39 L~~~~~vlflDaDigVvNp~~~iEefid~~-~Di~fydR~~n~Ei~agsYlvkNT~~~~~fl~~-~a~~E~~lP~sfhGt 116 (222)
T PF03314_consen 39 LPEYDWVLFLDADIGVVNPNRRIEEFIDEG-YDIIFYDRFFNWEIAAGSYLVKNTEYSRDFLKE-WADYEFKLPNSFHGT 116 (222)
T ss_pred hccCCEEEEEcCCceeecCcccHHHhcCCC-CcEEEEecccchhhhhccceeeCCHHHHHHHHH-HhhhCccCCCccccC
Confidence 5789999999999999865 55544322 11111 1 0 11244677777766543333332 322 23456789
Q ss_pred chhHHhcccCC
Q 011823 204 DQGFIASYFPD 214 (476)
Q Consensus 204 DQDiLN~~f~d 214 (476)
|-|.|..++.+
T Consensus 117 DNGAlH~~L~e 127 (222)
T PF03314_consen 117 DNGALHIFLAE 127 (222)
T ss_pred ccHHHHHHHHH
Confidence 99999988765
No 73
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=32.13 E-value=1.4e+02 Score=27.02 Aligned_cols=79 Identities=18% Similarity=0.180 Sum_probs=39.6
Q ss_pred HHHHHHHHHHhCC-CCcEEEEEcCCC-CHHHHHHHHhh-CCCEEEEEeccCCcccccccccchhhhhhHhhhhhhccCcC
Q 011823 62 TRVMIRSLVRLHV-DADIVVIASLDV-PLRWVQALEQE-DGAKVVRVENLNNPYKDQANFDRRFKLTLNKLYAWNLVDYD 138 (476)
Q Consensus 62 a~VL~~SL~~~ns-~~dlvVlvt~~I-s~e~~~~L~~~-~g~~v~~V~~i~~p~~~~~~~~~r~~~ty~KL~i~~L~eyd 138 (476)
+.-++.|+..... +..+ ++++++- ++...+.+++. ....+..+. .+.. .. ....+-...+..+.|
T Consensus 15 l~~~l~Sl~~q~~~~~ei-iivdd~ss~d~t~~~~~~~~~~~~i~~i~---~~~n------~G--~~~a~N~g~~~a~gd 82 (201)
T cd04195 15 LREALESILKQTLPPDEV-VLVKDGPVTQSLNEVLEEFKRKLPLKVVP---LEKN------RG--LGKALNEGLKHCTYD 82 (201)
T ss_pred HHHHHHHHHhcCCCCcEE-EEEECCCCchhHHHHHHHHHhcCCeEEEE---cCcc------cc--HHHHHHHHHHhcCCC
Confidence 4466788877542 3344 3444444 44555555542 111122122 1110 11 112233333456788
Q ss_pred eEEEEcCCeecccC
Q 011823 139 RVVMLDSDNLFLEK 152 (476)
Q Consensus 139 RVLYLDaD~LVl~n 152 (476)
=++++|+|.+...+
T Consensus 83 ~i~~lD~Dd~~~~~ 96 (201)
T cd04195 83 WVARMDTDDISLPD 96 (201)
T ss_pred EEEEeCCccccCcH
Confidence 99999999987654
No 74
>PRK10447 HflBKC-binding inner membrane protein; Provisional
Probab=32.06 E-value=3.5e+02 Score=26.67 Aligned_cols=93 Identities=15% Similarity=0.128 Sum_probs=53.8
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHhhceeeccCccCcchhHHHHHHHHHHHHHHHHhhhccc----chhhhhhHHHH-HHH
Q 011823 335 DKSISIIQTGLKLVAVWSILASYIMPFFLVPSTLHPLLAWPLYFLGSFALSTIAINSFFLP----ILPVLAPWLLI-FGS 409 (476)
Q Consensus 335 ~k~~~~~~~~~~~~~~~~~~~~~~~~f~~~p~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-~~~ 409 (476)
+|..+-.+..+-+..+.+.+.+|+.-++.+ |..|+.+.+++++.++-.....=.-| .+...|...|. +|.
T Consensus 18 ~~~Lr~vY~lLa~tl~~aa~ga~v~~~~~~-----~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~llf~fT~~~G~~lg~ 92 (219)
T PRK10447 18 HKVLRNTYFLLSLTLAFSAITATASTVLML-----PSPGLILTLVGMYGLMFLTYKTANKPTGILSAFAFTGFLGYILGP 92 (219)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-----chhHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHH
Confidence 355555566666666667777776654322 66777777777765554333322223 56666767776 677
Q ss_pred HHHhhcccc-chhHHHHHHHHHHH
Q 011823 410 LLVMAYPWY-SNGVVRALAVFFYA 432 (476)
Q Consensus 410 ~~~~~~~~~-~~~~~~~~~~~~~~ 432 (476)
++.+..... |+-|.-++.+-+-.
T Consensus 93 i~~~y~~~~~~~iV~~A~~~Ta~i 116 (219)
T PRK10447 93 ILNTYLSAGMGDVIALALGGTALV 116 (219)
T ss_pred HHHHHHhcCCccHHHHHHHHHHHH
Confidence 776664432 35566665544433
No 75
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=31.93 E-value=1.6e+02 Score=28.10 Aligned_cols=79 Identities=19% Similarity=0.117 Sum_probs=41.4
Q ss_pred HHHHHHHHHHhC-CCCcEEE-EEcCCCCHHHHHHHHhhCC----CEEEEEeccCCcccccccccchhhhhhHhhhhhhcc
Q 011823 62 TRVMIRSLVRLH-VDADIVV-IASLDVPLRWVQALEQEDG----AKVVRVENLNNPYKDQANFDRRFKLTLNKLYAWNLV 135 (476)
Q Consensus 62 a~VL~~SL~~~n-s~~dlvV-lvt~~Is~e~~~~L~~~~g----~~v~~V~~i~~p~~~~~~~~~r~~~ty~KL~i~~L~ 135 (476)
+.-++.|+.+.. +...+-+ +++++-++++.+.+++ .+ .+++.++ +... . +. ..+.+ ...+..
T Consensus 16 l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~i~~~-~~~~~~~~i~~~~---~~~~----~-G~-~~a~n--~g~~~a 83 (241)
T cd06427 16 LPQLIASLSALDYPRSKLDVKLLLEEDDEETIAAARA-LRLPSIFRVVVVP---PSQP----R-TK-PKACN--YALAFA 83 (241)
T ss_pred HHHHHHHHHhCcCCcccEEEEEEECCCCchHHHHHHH-hccCCCeeEEEec---CCCC----C-ch-HHHHH--HHHHhc
Confidence 446678887643 2212323 3445556777777777 32 2222222 1100 0 00 01122 233346
Q ss_pred CcCeEEEEcCCeecccC
Q 011823 136 DYDRVVMLDSDNLFLEK 152 (476)
Q Consensus 136 eydRVLYLDaD~LVl~n 152 (476)
+.|=|+++|+|+.+-.+
T Consensus 84 ~gd~i~~~DaD~~~~~~ 100 (241)
T cd06427 84 RGEYVVIYDAEDAPDPD 100 (241)
T ss_pred CCCEEEEEcCCCCCChH
Confidence 78999999999998766
No 76
>PF05704 Caps_synth: Capsular polysaccharide synthesis protein; InterPro: IPR008441 This entry consists of several capsular polysaccharide proteins. Capsular polysaccharide (CPS) is a major virulence factor in Streptococcus pneumoniae. This family is often transcribed with putative glycosyl transferases to give rise to bifunctional proteins [].
Probab=31.62 E-value=3.2e+02 Score=27.68 Aligned_cols=118 Identities=12% Similarity=0.125 Sum_probs=62.4
Q ss_pred hHH-HHHHHHHHHHhCCCCcEEEEEcCCCCHHHHHHHHhhCCCEEEEEe-ccCCcccccccccchhhhhhHhhhhhhccC
Q 011823 59 YVA-TRVMIRSLVRLHVDADIVVIASLDVPLRWVQALEQEDGAKVVRVE-NLNNPYKDQANFDRRFKLTLNKLYAWNLVD 136 (476)
Q Consensus 59 l~g-a~VL~~SL~~~ns~~dlvVlvt~~Is~e~~~~L~~~~g~~v~~V~-~i~~p~~~~~~~~~r~~~ty~KL~i~~L~e 136 (476)
.+. +...+.|+++++++++++++..++ +++. +. ++ .+..... .........+-+.|+.+-. +
T Consensus 59 aP~~Vk~ci~s~~k~~~~~~Vi~lt~~N--------i~~Y--v~---~P~~i~~k~~-~g~i~~a~~SDilR~~LL~--~ 122 (276)
T PF05704_consen 59 APEIVKKCINSWRKNAPDYEVILLTEDN--------IKDY--VD---IPDFILEKYE-KGKISPAHFSDILRLALLY--K 122 (276)
T ss_pred cCHHHHHHHHHHHHHCCCCeEEEEChHH--------HHHH--cC---CchhHHHHHH-cCCCchhHHHHHHHHHHHH--H
Confidence 344 678899999999999988875322 2220 00 00 0000000 0000111224466766533 2
Q ss_pred cCeEEEEcCCeecccCchhhhc-CCCeeeee-c---CC---CCccceEEEEeCCHHHHHHHHHHH
Q 011823 137 YDRVVMLDSDNLFLEKTDELFQ-CGQFCAVF-I---NP---CIFHTGLFVLQPSETVFKDMIHEL 193 (476)
Q Consensus 137 ydRVLYLDaD~LVl~nLdeLFd-~~~~~Aa~-d---~P---~yFNSGVmvInps~~~f~~lle~l 193 (476)
|- =+|+||++++.+++++.+. .+-++... + ++ ....+++|.-+++....+.+.+.+
T Consensus 123 yG-GvWiDatv~~t~~l~~~~~~~~ff~~~~~~~~~~~~~~~~w~~~fi~a~~~n~~~~~~~~~~ 186 (276)
T PF05704_consen 123 YG-GVWIDATVYLTKPLDDEIFDSDFFSFSRPDKDYNPISISSWTNFFIAAKKGNPFIKFWRDLL 186 (276)
T ss_pred cC-cEEeCCceEECCchhHHHhcCCeeEEeccCcCcccchHHHhHhhheeECCCCHHHHHHHHHH
Confidence 22 3799999999999997654 44333311 1 11 234455666667666665555443
No 77
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=31.33 E-value=2.4e+02 Score=22.95 Aligned_cols=70 Identities=21% Similarity=0.277 Sum_probs=37.9
Q ss_pred CCcEEEEEcCCCCHHHHHHHHhhCCCEEEEEeccCCcccccccccchhhhhhHhhhhhhccCcCeEEEEcCCeecccC
Q 011823 75 DADIVVIASLDVPLRWVQALEQEDGAKVVRVENLNNPYKDQANFDRRFKLTLNKLYAWNLVDYDRVVMLDSDNLFLEK 152 (476)
Q Consensus 75 ~~dlvVlvt~~Is~e~~~~L~~~~g~~v~~V~~i~~p~~~~~~~~~r~~~ty~KL~i~~L~eydRVLYLDaD~LVl~n 152 (476)
+.+-+++++++-++++.+.|++..+++++... .+... .+....+.+...-...+.+=|+++|+|=++.-+
T Consensus 18 G~d~i~i~d~~s~D~t~~~l~~~~~v~i~~~~---~~~~~-----~~~~~~~~~~~~~~~~~~dWvl~~D~DEfl~~~ 87 (97)
T PF13704_consen 18 GVDHIYIYDDGSTDGTREILRALPGVGIIRWV---DPYRD-----ERRQRAWRNALIERAFDADWVLFLDADEFLVPP 87 (97)
T ss_pred CCCEEEEEECCCCccHHHHHHhCCCcEEEEeC---CCccc-----hHHHHHHHHHHHHhCCCCCEEEEEeeeEEEecC
Confidence 35655556666667778888874444443222 22211 111112222222233578999999999877644
No 78
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=30.99 E-value=2.4e+02 Score=26.43 Aligned_cols=20 Identities=15% Similarity=0.189 Sum_probs=16.9
Q ss_pred hccCcCeEEEEcCCeecccC
Q 011823 133 NLVDYDRVVMLDSDNLFLEK 152 (476)
Q Consensus 133 ~L~eydRVLYLDaD~LVl~n 152 (476)
+..++|=|+.+|+|+++-.+
T Consensus 84 ~~a~~~~i~~~DaD~~~~~~ 103 (232)
T cd06437 84 KVAKGEYVAIFDADFVPPPD 103 (232)
T ss_pred HhCCCCEEEEEcCCCCCChH
Confidence 45689999999999998765
No 79
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=30.09 E-value=4.3e+02 Score=27.37 Aligned_cols=39 Identities=31% Similarity=0.238 Sum_probs=26.1
Q ss_pred cCcCeEEEEcCCeecccC-chhhhcC---CCeeeeecCCCCcc
Q 011823 135 VDYDRVVMLDSDNLFLEK-TDELFQC---GQFCAVFINPCIFH 173 (476)
Q Consensus 135 ~eydRVLYLDaD~LVl~n-LdeLFd~---~~~~Aa~d~P~yFN 173 (476)
.++|=|+.+|||+++-+| +.++... +...|+...|..+|
T Consensus 136 ~~~d~V~~~DaD~~~~~d~l~~~~~~f~~~~~~~v~~~~~~~~ 178 (439)
T COG1215 136 AKGDVVVILDADTVPEPDALRELVSPFEDPPVGAVVGTPRIRN 178 (439)
T ss_pred cCCCEEEEEcCCCCCChhHHHHHHhhhcCCCeeEEeCCceeee
Confidence 459999999999999887 5555542 33335555554444
No 80
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=29.69 E-value=3.5e+02 Score=25.64 Aligned_cols=73 Identities=22% Similarity=0.222 Sum_probs=42.0
Q ss_pred HHHHHHHHHHhCCCCcEEEEEcCCCCHHHHHHHHhhCCCEEEEEeccCCcccccccccchhhhhhHhhhhhhccCcCeEE
Q 011823 62 TRVMIRSLVRLHVDADIVVIASLDVPLRWVQALEQEDGAKVVRVENLNNPYKDQANFDRRFKLTLNKLYAWNLVDYDRVV 141 (476)
Q Consensus 62 a~VL~~SL~~~ns~~dlvVlvt~~Is~e~~~~L~~~~g~~v~~V~~i~~p~~~~~~~~~r~~~ty~KL~i~~L~eydRVL 141 (476)
+.-++.|+... .+-+++++++-++.+.+.+++ .+.+++.. .+.. + .-.|=...+....|-|+
T Consensus 15 l~~~l~sl~~~---~~eiivvD~gStD~t~~i~~~-~~~~v~~~---~~~g---------~--~~~~n~~~~~a~~d~vl 76 (229)
T cd02511 15 IERCLESVKWA---VDEIIVVDSGSTDRTVEIAKE-YGAKVYQR---WWDG---------F--GAQRNFALELATNDWVL 76 (229)
T ss_pred HHHHHHHHhcc---cCEEEEEeCCCCccHHHHHHH-cCCEEEEC---CCCC---------h--HHHHHHHHHhCCCCEEE
Confidence 44556777643 123445666656667777777 78776533 1110 0 11122233445678999
Q ss_pred EEcCCeecccC
Q 011823 142 MLDSDNLFLEK 152 (476)
Q Consensus 142 YLDaD~LVl~n 152 (476)
.+|+|..+..+
T Consensus 77 ~lDaD~~~~~~ 87 (229)
T cd02511 77 SLDADERLTPE 87 (229)
T ss_pred EEeCCcCcCHH
Confidence 99999886554
No 81
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=29.63 E-value=2e+02 Score=26.24 Aligned_cols=89 Identities=12% Similarity=0.101 Sum_probs=43.4
Q ss_pred HHHHHHHHHHhC-CCCcEEEEEcCCCCHHHHHHHHhhCCCEEEEEeccCCcccccccccchhhhhhHhhhhhhccCcCeE
Q 011823 62 TRVMIRSLVRLH-VDADIVVIASLDVPLRWVQALEQEDGAKVVRVENLNNPYKDQANFDRRFKLTLNKLYAWNLVDYDRV 140 (476)
Q Consensus 62 a~VL~~SL~~~n-s~~dlvVlvt~~Is~e~~~~L~~~~g~~v~~V~~i~~p~~~~~~~~~r~~~ty~KL~i~~L~eydRV 140 (476)
..-++.||.+.. ++.+ +++++++-+++..+.+++ .+... .+..+..+... ............. . ..++|-+
T Consensus 12 l~~~l~sl~~q~~~~~e-iiivD~~s~d~t~~~~~~-~~~~~-~i~~~~~~~n~--g~~~~~n~~~~~a-~--~~~~d~v 83 (202)
T cd04185 12 LKECLDALLAQTRPPDH-IIVIDNASTDGTAEWLTS-LGDLD-NIVYLRLPENL--GGAGGFYEGVRRA-Y--ELGYDWI 83 (202)
T ss_pred HHHHHHHHHhccCCCce-EEEEECCCCcchHHHHHH-hcCCC-ceEEEECcccc--chhhHHHHHHHHH-h--ccCCCEE
Confidence 456678887653 3333 444555555566666666 33221 02222211110 0000111111111 1 2468999
Q ss_pred EEEcCCeecccC-chhhhc
Q 011823 141 VMLDSDNLFLEK-TDELFQ 158 (476)
Q Consensus 141 LYLDaD~LVl~n-LdeLFd 158 (476)
+++|+|.++..+ ++++.+
T Consensus 84 ~~ld~D~~~~~~~l~~l~~ 102 (202)
T cd04185 84 WLMDDDAIPDPDALEKLLA 102 (202)
T ss_pred EEeCCCCCcChHHHHHHHH
Confidence 999999999765 444443
No 82
>PF02485 Branch: Core-2/I-Branching enzyme; InterPro: IPR003406 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase family 14 GT14 from CAZY, a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme (2.4.1.150 from EC) and core-2 branching enzyme (2.4.1.102 from EC). I-branching enzyme, an integral membrane protein, converts linear into branched poly-N-acetyllactosaminoglycans in the glycosylation pathway, and is responsible for the production of the blood group I-antigen during embryonic development []. Core-2 branching enzyme, also an integral membrane protein, forms crucial side-chain branches in O-glycans in the glycosylation pathway [].; GO: 0008375 acetylglucosaminyltransferase activity, 0016020 membrane; PDB: 3OTK_D 2GAM_A 2GAK_B.
Probab=29.59 E-value=1.5e+02 Score=28.66 Aligned_cols=101 Identities=22% Similarity=0.243 Sum_probs=51.9
Q ss_pred EEEEEEeecCCCCccchHHHHHHHHHHHHhCCCCcEEEEEcCCCCHHHHHHHHhh--CCCEEEEEe-ccCCccccccccc
Q 011823 43 AYATMMYMGTPRDYEFYVATRVMIRSLVRLHVDADIVVIASLDVPLRWVQALEQE--DGAKVVRVE-NLNNPYKDQANFD 119 (476)
Q Consensus 43 AYvTivy~~t~~dYeyl~ga~VL~~SL~~~ns~~dlvVlvt~~Is~e~~~~L~~~--~g~~v~~V~-~i~~p~~~~~~~~ 119 (476)
||+-+++.+ + ...+..+++.+. +++..++++++.+.+....+.+++. ....++.++ .+.. .-
T Consensus 2 Aylil~h~~---~---~~~~~~l~~~l~--~~~~~f~iHiD~k~~~~~~~~~~~~~~~~~nv~~v~~r~~v-------~W 66 (244)
T PF02485_consen 2 AYLILAHKN---D---PEQLERLLRLLY--HPDNDFYIHIDKKSPDYFYEEIKKLISCFPNVHFVPKRVDV-------RW 66 (244)
T ss_dssp EEEEEESS--------HHHHHHHHHHH----TTSEEEEEE-TTS-HHHHHHHHHHHCT-TTEEE-SS------------T
T ss_pred EEEEEecCC---C---HHHHHHHHHHhc--CCCCEEEEEEcCCCChHHHHHHHHhcccCCceeeccccccc-------cc
Confidence 788788641 2 345666666666 4777888888877777777766652 222233333 1110 01
Q ss_pred chh---hhhhHhhh-hhhc-cCcCeEEEEcCCeecccCchhhhc
Q 011823 120 RRF---KLTLNKLY-AWNL-VDYDRVVMLDSDNLFLEKTDELFQ 158 (476)
Q Consensus 120 ~r~---~~ty~KL~-i~~L-~eydRVLYLDaD~LVl~nLdeLFd 158 (476)
+.+ .+++.=+. +.+. .++|+++.|..+.+.+++.+++-+
T Consensus 67 G~~S~v~A~l~ll~~al~~~~~~~y~~llSg~D~Pl~s~~~i~~ 110 (244)
T PF02485_consen 67 GGFSLVEATLNLLREALKRDGDWDYFILLSGQDYPLKSNEEIHE 110 (244)
T ss_dssp TSHHHHHHHHHHHHHHHHH-S---EEEEEETTEEESS-HHHHHH
T ss_pred CCccHHHHHHHHHHHHHhcCCCCcEEEEcccccccccchHHHHH
Confidence 112 12222222 1222 389999999999999999888765
No 83
>TIGR01732 tiny_TM_bacill conserved hypothetical tiny transmembrane protein. This model represents a family of hypothetical proteins, half of which are 40 residues or less in length. Members are found only in spore-forming species. A Gly-rich variable region is followed by a strongly conserved, highly hydrophobic region, predicted to form a transmembrane helix, ending with an invariant Gly. The consensus for this stretch is FALLVVFILLIIV.
Probab=27.45 E-value=54 Score=21.77 Aligned_cols=19 Identities=42% Similarity=0.742 Sum_probs=16.2
Q ss_pred hhhhHHHHHHHHHHHHHHH
Q 011823 10 ASGFWLLRVLFLFYAFVAA 28 (476)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~ 28 (476)
+.|+.++.|+|.+..++-+
T Consensus 5 g~gf~livVLFILLIIiga 23 (26)
T TIGR01732 5 GGGFALIVVLFILLVIVGA 23 (26)
T ss_pred CcchHHHHHHHHHHHHhhe
Confidence 4789999999999988765
No 84
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=27.33 E-value=3.5e+02 Score=25.24 Aligned_cols=21 Identities=19% Similarity=0.300 Sum_probs=16.0
Q ss_pred CcCeEEEEcCCeecccC-chhh
Q 011823 136 DYDRVVMLDSDNLFLEK-TDEL 156 (476)
Q Consensus 136 eydRVLYLDaD~LVl~n-LdeL 156 (476)
++|=|+++|+|.++-.+ |.++
T Consensus 84 ~~d~i~~lD~D~~~~~~~l~~l 105 (236)
T cd06435 84 DAEIIAVIDADYQVEPDWLKRL 105 (236)
T ss_pred CCCEEEEEcCCCCcCHHHHHHH
Confidence 48999999999987655 4444
No 85
>PF04765 DUF616: Protein of unknown function (DUF616); InterPro: IPR006852 The entry represents a protein of unknown function. The function of is unknown although a number of the members are thought to be glycosyltransferases.
Probab=26.18 E-value=91 Score=32.40 Aligned_cols=105 Identities=15% Similarity=0.178 Sum_probs=62.0
Q ss_pred CCCeEEEEEEeecCCCCccch-HHHHHHHHHHHHhCCCCcEEEEEcCCCCHHHHHH---HHh----hCCCEEEEEeccCC
Q 011823 39 RHKNAYATMMYMGTPRDYEFY-VATRVMIRSLVRLHVDADIVVIASLDVPLRWVQA---LEQ----EDGAKVVRVENLNN 110 (476)
Q Consensus 39 ~~~~AYvTivy~~t~~dYeyl-~ga~VL~~SL~~~ns~~dlvVlvt~~Is~e~~~~---L~~----~~g~~v~~V~~i~~ 110 (476)
.-+.+.+|.+.++. +.+ .|..+.-.|. .+.++++++ |+.+.+.++. +.. ...++++.|+.++
T Consensus 62 ~c~vvV~saIFG~y----D~l~qP~~i~~~s~----~~vcf~mF~-D~~t~~~l~~~~~~~~~~~~ig~WrIv~v~~lp- 131 (305)
T PF04765_consen 62 KCRVVVYSAIFGNY----DKLRQPKNISEYSK----KNVCFFMFV-DEETLKSLESEGHIPDENKKIGIWRIVVVKNLP- 131 (305)
T ss_pred cCCEEEEEEecCCC----ccccCchhhCHHHh----cCccEEEEE-ehhhHHHHHhcCCccccccccCceEEEEecCCC-
Confidence 44588888888742 223 2333212222 345555555 5554433222 000 0247888887553
Q ss_pred cccccccccchhhhhhHhhhhhhc-cCcCeEEEEcCCeecccCchhhhcC
Q 011823 111 PYKDQANFDRRFKLTLNKLYAWNL-VDYDRVVMLDSDNLFLEKTDELFQC 159 (476)
Q Consensus 111 p~~~~~~~~~r~~~ty~KL~i~~L-~eydRVLYLDaD~LVl~nLdeLFd~ 159 (476)
+. +.|-..-+.|++...+ .+|+--||+|+-+-+..|+..|.+.
T Consensus 132 -~~-----d~rr~~r~~K~lpHrlfp~y~ySIWID~ki~L~~Dp~~lie~ 175 (305)
T PF04765_consen 132 -YD-----DPRRNGRIPKLLPHRLFPNYDYSIWIDGKIQLIVDPLLLIER 175 (305)
T ss_pred -Cc-----chhhcCcccceeccccCCCCceEEEEeeeEEEecCHHHHHHH
Confidence 21 1222334778888875 7899999999999999998877763
No 86
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=26.16 E-value=2e+02 Score=24.31 Aligned_cols=81 Identities=21% Similarity=0.146 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHhCCC-CcEEEEEcCCCCHHHHHHHHhhCCCEEEEEeccCCcccccccccchhhhhhHhhhhhhccCcCe
Q 011823 61 ATRVMIRSLVRLHVD-ADIVVIASLDVPLRWVQALEQEDGAKVVRVENLNNPYKDQANFDRRFKLTLNKLYAWNLVDYDR 139 (476)
Q Consensus 61 ga~VL~~SL~~~ns~-~dlvVlvt~~Is~e~~~~L~~~~g~~v~~V~~i~~p~~~~~~~~~r~~~ty~KL~i~~L~eydR 139 (476)
.+.-++.|+.+.... .. +++++++-++++.+..++ ...+...+.....+ ........+-.......-|-
T Consensus 17 ~l~~~l~s~~~q~~~~~e-iivvddgs~d~t~~~~~~-~~~~~~~~~~~~~~--------~~~g~~~~~~~~~~~~~~~~ 86 (291)
T COG0463 17 YLPEALESLLNQTYKDFE-IIVVDDGSTDGTTEIAIE-YGAKDVRVIRLINE--------RNGGLGAARNAGLEYARGDY 86 (291)
T ss_pred hHHHHHHHHHhhhhcceE-EEEEeCCCCCChHHHHHH-HhhhcceEEEeecc--------cCCChHHHHHhhHHhccCCE
Confidence 355677888775433 34 555666666666566655 22221001101000 00112233333333333399
Q ss_pred EEEEcCCeecccC
Q 011823 140 VVMLDSDNLFLEK 152 (476)
Q Consensus 140 VLYLDaD~LVl~n 152 (476)
|+++|+|.+ ..+
T Consensus 87 ~~~~d~d~~-~~~ 98 (291)
T COG0463 87 IVFLDADDQ-HPP 98 (291)
T ss_pred EEEEccCCC-CCH
Confidence 999999999 655
No 87
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=25.35 E-value=1.1e+02 Score=27.12 Aligned_cols=27 Identities=22% Similarity=0.196 Sum_probs=19.9
Q ss_pred hccCcCeEEEEcCCeecccC-chhhhcC
Q 011823 133 NLVDYDRVVMLDSDNLFLEK-TDELFQC 159 (476)
Q Consensus 133 ~L~eydRVLYLDaD~LVl~n-LdeLFd~ 159 (476)
+...-|=++.+|+|..+..+ ++++.+.
T Consensus 76 ~~a~gd~i~~lD~D~~~~~~~l~~l~~~ 103 (185)
T cd04179 76 KAARGDIVVTMDADLQHPPEDIPKLLEK 103 (185)
T ss_pred HHhcCCEEEEEeCCCCCCHHHHHHHHHH
Confidence 33445889999999988766 6667663
No 88
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=25.32 E-value=5.1e+02 Score=23.98 Aligned_cols=32 Identities=19% Similarity=0.195 Sum_probs=22.1
Q ss_pred hHhhhhhhccCcCeEEEEcCCeecccC-chhhh
Q 011823 126 LNKLYAWNLVDYDRVVMLDSDNLFLEK-TDELF 157 (476)
Q Consensus 126 y~KL~i~~L~eydRVLYLDaD~LVl~n-LdeLF 157 (476)
..|-...+..+.|-+++||+|.++..+ +..+.
T Consensus 74 ~a~N~g~~~a~gd~i~~lD~D~~~~~~~l~~~~ 106 (219)
T cd06913 74 YAKNQAIAQSSGRYLCFLDSDDVMMPQRIRLQY 106 (219)
T ss_pred HHHHHHHHhcCCCEEEEECCCccCChhHHHHHH
Confidence 334445566789999999999987654 44443
No 89
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=25.29 E-value=3e+02 Score=25.25 Aligned_cols=26 Identities=23% Similarity=0.293 Sum_probs=17.8
Q ss_pred hccCcCeEEEEcCCeecccC-chhhhc
Q 011823 133 NLVDYDRVVMLDSDNLFLEK-TDELFQ 158 (476)
Q Consensus 133 ~L~eydRVLYLDaD~LVl~n-LdeLFd 158 (476)
+...-|-|+++|+|..+..+ ++.+.+
T Consensus 75 ~~a~gd~i~~lD~D~~~~~~~l~~l~~ 101 (224)
T cd06442 75 KAARGDVIVVMDADLSHPPEYIPELLE 101 (224)
T ss_pred HHcCCCEEEEEECCCCCCHHHHHHHHH
Confidence 33455889999999887654 444444
No 90
>PRK12670 putative monovalent cation/H+ antiporter subunit G; Reviewed
Probab=24.29 E-value=4.7e+02 Score=22.60 Aligned_cols=73 Identities=18% Similarity=0.228 Sum_probs=50.1
Q ss_pred chhHHHHHHHHHHHHHHHHhhhcccchh----------hhhhHHHHHHHHHHhhccccchhHHHHHHHHHHHHhhhhHHH
Q 011823 371 LLAWPLYFLGSFALSTIAINSFFLPILP----------VLAPWLLIFGSLLVMAYPWYSNGVVRALAVFFYAFCSAPIVW 440 (476)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (476)
..++.+.++|++..+.-++-.+++|-.+ .+--++-++|+.+-.. .+.-.+|++.+....++.+|..=
T Consensus 4 ~l~~~ll~~G~~f~l~g~iGllR~pD~y~RlHA~tk~~TlG~~lil~g~~l~~~---~~~~~~k~lli~~f~~lT~Pvaa 80 (99)
T PRK12670 4 MLGMITLGLGIFLIVISVIGVIRFPDFYTRLHAAGITDSLGAALILIGLAMQCG---FSVFTVKVLLLICLLWITSTTAS 80 (99)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCccHHHHhhccccchhhhHHHHHHHHHHHhc---chHHHHHHHHHHHHHHHHHHHHH
Confidence 3578888889999999999999999443 1223334455443321 22237799999999999999865
Q ss_pred HHHHHh
Q 011823 441 VSLTKV 446 (476)
Q Consensus 441 ~~~~~~ 446 (476)
-.+.|-
T Consensus 81 h~iarA 86 (99)
T PRK12670 81 YALARS 86 (99)
T ss_pred HHHHHH
Confidence 555554
No 91
>PRK10921 twin-arginine protein translocation system subunit TatC; Provisional
Probab=23.28 E-value=7.7e+02 Score=24.78 Aligned_cols=58 Identities=22% Similarity=0.248 Sum_probs=35.7
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHhhhcccchhhhhhHHHH--------------HHHHHHhh--ccccchhHHHHH
Q 011823 367 TLHPLLAWPLYFLGSFALSTIAINSFFLPILPVLAPWLLI--------------FGSLLVMA--YPWYSNGVVRAL 426 (476)
Q Consensus 367 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~--~~~~~~~~~~~~ 426 (476)
.+.|..+-.-|+-....++...-=+|++|++.++-..+|+ +|.+++-| -| ||.+.-.+
T Consensus 144 ~~~~~~~i~~Y~~fv~~~~l~fGl~FelPli~~~L~~~giv~~~~l~~~Rr~~~v~~~iiaAiiTP--pD~isq~l 217 (258)
T PRK10921 144 GVQVSTDIASYLSFVMALFMAFGVSFEVPVAIVLLCWMGVTTPEDLRKKRPYVLVGAFVVGMLLTP--PDVFSQTL 217 (258)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhcCcHHhHHHHHHHHHcCC--CcHHHHHH
Confidence 3445445555555555555556667999987776665555 55555555 78 88875443
No 92
>COG0805 TatC Sec-independent protein secretion pathway component TatC [Intracellular trafficking and secretion]
Probab=23.20 E-value=6.8e+02 Score=25.38 Aligned_cols=62 Identities=24% Similarity=0.311 Sum_probs=48.0
Q ss_pred cCccCcchhHHHHHHHHHHHHHHHHhhhcccchhhhhhHHHH--------------HHHHHHhh--ccccchhHHHHHHH
Q 011823 365 PSTLHPLLAWPLYFLGSFALSTIAINSFFLPILPVLAPWLLI--------------FGSLLVMA--YPWYSNGVVRALAV 428 (476)
Q Consensus 365 p~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~--~~~~~~~~~~~~~~ 428 (476)
|.++-|..+=.-|+-..+.++...-=+|++|++-++--|+|+ +|.+++-| -| ||++.-.+.-
T Consensus 146 ~~~~~~~~~i~~y~~f~l~l~~~FGv~FElPvv~~~L~~~Giv~~~~L~~~rr~~iv~~fViaaviTP--pd~~sq~lla 223 (255)
T COG0805 146 PDGVSPALSISKYLSFVLTLLLAFGVAFELPVVIVLLTRLGIVTPETLKKKRRYAIVAAFVIAAIITP--PDVLSQILLA 223 (255)
T ss_pred ccceeeeecHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHcCCeeeehHHHHHHHcCC--CchHHHHHHH
Confidence 778888888777777777777777778999999999999998 45554444 78 9998766543
No 93
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=22.92 E-value=2.5e+02 Score=25.80 Aligned_cols=27 Identities=22% Similarity=0.294 Sum_probs=19.0
Q ss_pred hhccCcCeEEEEcCCeecccC-chhhhc
Q 011823 132 WNLVDYDRVVMLDSDNLFLEK-TDELFQ 158 (476)
Q Consensus 132 ~~L~eydRVLYLDaD~LVl~n-LdeLFd 158 (476)
.+..+.|=++++|+|+.+-.+ ++++.+
T Consensus 82 ~~~a~~d~i~~~D~D~~~~~~~l~~l~~ 109 (196)
T cd02520 82 YEEARYDILVISDSDISVPPDYLRRMVA 109 (196)
T ss_pred HHhCCCCEEEEECCCceEChhHHHHHHH
Confidence 344679999999999987554 444443
No 94
>PLN02797 phosphatidyl-N-dimethylethanolamine N-methyltransferase
Probab=22.07 E-value=1.8e+02 Score=27.41 Aligned_cols=57 Identities=28% Similarity=0.360 Sum_probs=36.6
Q ss_pred CCCccccccCCCchhHHHHHHHHHHHHHHHHHHhhceeeccCccCcchhHHHHHHHHHHHH
Q 011823 325 NMPKLCYRRSDKSISIIQTGLKLVAVWSILASYIMPFFLVPSTLHPLLAWPLYFLGSFALS 385 (476)
Q Consensus 325 ~~~~~~~r~~~k~~~~~~~~~~~~~~~~~~~~~~~~f~~~p~~~~p~~~~~~~~~~~~~~~ 385 (476)
..+|.|.|..+..+.+.+..-.+-.+-.+..+.+..| ++-.|+.||.++.+|..--.
T Consensus 25 ~w~~~c~~~~dp~~~ma~~sh~lk~lqfi~l~sva~f----~~pppl~~~~L~aiGq~Lv~ 81 (164)
T PLN02797 25 SWVNLCGGGRDPSHVMAQVSHALKALQFLSLFSVASF----SWPPPLYFWPLFAFGQFLNF 81 (164)
T ss_pred HHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHhhc----cCCChHHHHHHHHHhhHHHH
Confidence 6788998655556666664444444444555555555 33457889999999986433
No 95
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=21.74 E-value=5.4e+02 Score=27.06 Aligned_cols=94 Identities=22% Similarity=0.253 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHhC-CC--CcEEEEEcCCCCHHHHHHHHhhCCCEEEEEeccCCcccccc---cc------cchhhhhhHh
Q 011823 61 ATRVMIRSLVRLH-VD--ADIVVIASLDVPLRWVQALEQEDGAKVVRVENLNNPYKDQA---NF------DRRFKLTLNK 128 (476)
Q Consensus 61 ga~VL~~SL~~~n-s~--~dlvVlvt~~Is~e~~~~L~~~~g~~v~~V~~i~~p~~~~~---~~------~~r~~~ty~K 128 (476)
.+.-++.||.+.. +. .+++|. .|+-.++..+..++ .+.++..+...+....... .. ..+.+...+
T Consensus 14 ~l~r~LesLl~~~p~~~~~~liIs-~DG~~~~~~~~v~~-~~~~i~~i~~~~~~~~~~~~~~~~~~y~~ia~hyk~aln- 90 (334)
T cd02514 14 YLRRMLDSLLSYRPSAEKFPIIVS-QDGGYEEVADVAKS-FGDGVTHIQHPPISIKNVNPPHKFQGYYRIARHYKWALT- 90 (334)
T ss_pred HHHHHHHHHHhccccCCCceEEEE-eCCCchHHHHHHHh-hccccEEEEcccccccccCcccccchhhHHHHHHHHHHH-
Confidence 3667788998875 32 334443 34444555666666 4323322332111110000 00 001111122
Q ss_pred hhhhhccCcCeEEEEcCCeecccCchhhhc
Q 011823 129 LYAWNLVDYDRVVMLDSDNLFLEKTDELFQ 158 (476)
Q Consensus 129 L~i~~L~eydRVLYLDaD~LVl~nLdeLFd 158 (476)
.+++..+++++|.||.|+++-.+.=+-|+
T Consensus 91 -~vF~~~~~~~vIILEDDl~~sPdFf~yf~ 119 (334)
T cd02514 91 -QTFNLFGYSFVIILEDDLDIAPDFFSYFQ 119 (334)
T ss_pred -HHHHhcCCCEEEEECCCCccCHhHHHHHH
Confidence 23333469999999999999988544443
No 96
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=21.59 E-value=7.5e+02 Score=28.49 Aligned_cols=19 Identities=16% Similarity=0.317 Sum_probs=16.7
Q ss_pred ccCcCeEEEEcCCeecccC
Q 011823 134 LVDYDRVVMLDSDNLFLEK 152 (476)
Q Consensus 134 L~eydRVLYLDaD~LVl~n 152 (476)
..+.|=|+.+|||.++..|
T Consensus 226 ~a~gd~Il~lDAD~v~~pd 244 (713)
T TIGR03030 226 HTDGELILIFDADHVPTRD 244 (713)
T ss_pred hcCCCEEEEECCCCCcChh
Confidence 4678999999999999876
No 97
>PRK12587 putative monovalent cation/H+ antiporter subunit G; Reviewed
Probab=20.87 E-value=4.8e+02 Score=23.37 Aligned_cols=76 Identities=17% Similarity=0.219 Sum_probs=50.0
Q ss_pred chhHHHHHHHHHHHHHHHHhhhcccchhh----------hhhHHHHHHHHHHhhccccchhHHHHHHHHHHHHhhhhHHH
Q 011823 371 LLAWPLYFLGSFALSTIAINSFFLPILPV----------LAPWLLIFGSLLVMAYPWYSNGVVRALAVFFYAFCSAPIVW 440 (476)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (476)
+.+..+.++|++..+..++-.+++|-++- +--++-++|+.+.. ......-.+|++.+....++.+|..=
T Consensus 8 ~l~~ill~~G~~~~ligaiGllR~PD~y~RlHAatk~~TlG~~lil~g~~l~~-~~~~~~~~~k~ll~~~f~~lT~Pvaa 86 (118)
T PRK12587 8 SLALIFVIIGALISALAAIGLLRLEDVYSRAHAAGKASTLGAMSLLFGTFLYF-IATQGYVNMQLIVGIIFVLITGPLSS 86 (118)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcHHHHhhhchhhhHhhHHHHHHHHHHHH-hcchhhHHHHHHHHHHHHHHHHHHHH
Confidence 45777888899999999999999994431 11222223333211 11222235799999999999999876
Q ss_pred HHHHHhh
Q 011823 441 VSLTKVM 447 (476)
Q Consensus 441 ~~~~~~~ 447 (476)
-.+.|-.
T Consensus 87 h~iaRAa 93 (118)
T PRK12587 87 HMIMKAA 93 (118)
T ss_pred HHHHHHH
Confidence 6666643
No 98
>TIGR01300 CPA3_mnhG_phaG monovalent cation/proton antiporter, MnhG/PhaG subunit. This model represents a subfamily of small, transmembrane proteins believed to be components of Na+/H+ and K+/H+ antiporters. Members, including proteins designated MnhG from Staphylococcus aureus and PhaG from Rhizobium meliloti, show some similarity to chain L of the NADH dehydrogenase I, which also translocates protons.
Probab=20.69 E-value=4.2e+02 Score=22.80 Aligned_cols=72 Identities=18% Similarity=0.233 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHHhhhcccchh----------hhhhHHHHHHHHHHhhccccchhHHHHHHHHHHHHhhhhHHHHHHHH
Q 011823 376 LYFLGSFALSTIAINSFFLPILP----------VLAPWLLIFGSLLVMAYPWYSNGVVRALAVFFYAFCSAPIVWVSLTK 445 (476)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (476)
+.++|++..++.++-.+++|-++ .+--++-.+|+.+..... ...-..|++.+....++.+|..=-.+.|
T Consensus 2 ll~~G~~f~l~g~iGllR~pD~y~RlHAatk~~tlG~~lil~g~~l~~~~~-~~~~~~~~lli~~f~~lT~Pvaah~iar 80 (97)
T TIGR01300 2 LLLIGAFFTLLGAIGLVRFPDVYTRLHAATKGTTLGTILILLGVALIALVL-DLAVSIKLLLIALFILLTNPVGAHLLAR 80 (97)
T ss_pred hHHHHHHHHHHHHHHHHhCCcHHHHhhhhhhhHHHHHHHHHHHHHHHHhcc-chhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46779999999999999999443 122233345544433311 2235789999999999999987666665
Q ss_pred hhh
Q 011823 446 VMS 448 (476)
Q Consensus 446 ~~~ 448 (476)
..-
T Consensus 81 aa~ 83 (97)
T TIGR01300 81 AAY 83 (97)
T ss_pred HHH
Confidence 543
No 99
>PF03334 PhaG_MnhG_YufB: Na+/H+ antiporter subunit; InterPro: IPR005133 This is a family of small, transmembrane proteins believed to be components of Na+/H+ and K+/H+ antiporters. Members, including proteins designated MnhG from Staphylococcus aureus and PhaG from Rhizobium meliloti (Sinorhizobium meliloti), show some similarity to chain L of the NADH dehydrogenase I, which also translocates protons. ; GO: 0005451 monovalent cation:hydrogen antiporter activity, 0015672 monovalent inorganic cation transport, 0015992 proton transport
Probab=20.30 E-value=3.9e+02 Score=22.03 Aligned_cols=61 Identities=21% Similarity=0.314 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHhhhcccchh----------hhhhHHHHHHHHHHhhccccchhHHHHHHHHHHHHhhhhHHH
Q 011823 377 YFLGSFALSTIAINSFFLPILP----------VLAPWLLIFGSLLVMAYPWYSNGVVRALAVFFYAFCSAPIVW 440 (476)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (476)
.++|++..+..++-.+.+|-.. .+-.++-.+|+.+.. .-+.-..|.+.+....++.+|..=
T Consensus 2 l~~G~~~~l~~~iGllR~pd~y~RlHa~s~~~tlG~~lilig~~l~~---~~~~~~~k~lli~~~~~lt~Pv~s 72 (81)
T PF03334_consen 2 LLLGAFFMLIGAIGLLRFPDFYTRLHAASKADTLGAILILIGLALYF---GSSWVSLKLLLIILFLLLTNPVAS 72 (81)
T ss_pred cHHHHHHHHHHHHHHHhCCcHHHHhhhhhHHHHHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHHHHHH
Confidence 3568888889999999999432 222333335554444 234467899999999999999753
No 100
>TIGR00869 sec62 protein translocation protein, Sec62 family. protein secretary systems of yeast microsomes. They are also the non-selective cation (NS) channels of the mammalian cytoplasmic membrane. The yeast Sec62 protein has been shown to be essential for cell growth. The mammalian NS channel proteins has been implicated in platelet derived growth factor(PGDF) dependent single channel current in fibroblasts. These channels are essentially closed in serum deprived tissue-culture cells and are specifically opened by exposure to PDGF. These channels are reported to exhibit equal selectivity for Na+, K+ and Cs+ with low permeability to Ca2+, and no permeability to anions.
Probab=20.01 E-value=2.2e+02 Score=28.52 Aligned_cols=32 Identities=22% Similarity=0.455 Sum_probs=18.4
Q ss_pred hHHHHHHHHHHhhccccchhHHHHHHHHHHHHhhhhHHH
Q 011823 402 PWLLIFGSLLVMAYPWYSNGVVRALAVFFYAFCSAPIVW 440 (476)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (476)
.-+|++|.++++| |+|++.-..--+++.|=.|
T Consensus 153 ~~lgll~~~~~la-------ivRlilF~i~~~~~g~~fW 184 (232)
T TIGR00869 153 GALGIIGGFFAVA-------ILRLILFVLTLIVVKPGIW 184 (232)
T ss_pred HHHHHHHHHHHHH-------HHHHHHHHHHHHHhCCCee
Confidence 3456777777775 6787654444444444444
Done!