Query 011823
Match_columns 476
No_of_seqs 216 out of 1181
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 16:02:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011823.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011823hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3u2u_A Glycogenin-1, GN-1, GN1 100.0 4.7E-41 1.6E-45 332.6 17.7 217 40-277 3-224 (263)
2 1ll2_A Glycogenin-1; protein-s 100.0 6.4E-37 2.2E-41 312.1 19.0 216 40-277 2-223 (333)
3 3tzt_A Glycosyl transferase fa 100.0 1.7E-32 5.9E-37 272.3 15.8 225 45-294 6-270 (276)
4 1g9r_A Glycosyl transferase; a 100.0 2.7E-30 9.3E-35 259.8 18.2 221 46-292 2-268 (311)
5 1qg8_A Protein (spore coat pol 50.6 1.2E+02 0.004 27.3 10.8 92 62-157 16-110 (255)
6 4hg6_A Cellulose synthase subu 43.8 2.1E+02 0.0073 31.6 13.3 25 133-157 235-260 (802)
7 3bcv_A Putative glycosyltransf 41.0 34 0.0012 30.6 5.3 99 40-158 5-107 (240)
8 1o7q_A N-acetyllactosaminide a 37.4 2.1E+02 0.0073 28.1 10.5 110 120-246 114-264 (289)
9 2d7i_A Polypeptide N-acetylgal 37.3 1.2E+02 0.0041 31.9 9.6 87 61-158 127-219 (570)
10 3ckj_A Putative uncharacterize 34.1 1.7E+02 0.0058 28.1 9.5 104 39-158 47-155 (329)
11 1fo8_A Alpha-1,3-mannosyl-glyc 33.4 1.3E+02 0.0046 29.9 8.7 93 62-157 16-120 (343)
12 1xhb_A Polypeptide N-acetylgal 25.1 3.8E+02 0.013 26.8 10.6 102 40-158 29-137 (472)
13 2z86_A Chondroitin synthase; G 24.6 3.9E+02 0.013 27.8 11.0 86 62-157 108-196 (625)
14 3f1y_A Mannosyl-3-phosphoglyce 23.4 3.1E+02 0.011 27.4 9.5 94 40-148 94-191 (387)
15 2p6w_A VP54, putative glycosyl 22.9 2E+02 0.007 26.9 7.1 59 132-190 68-138 (213)
16 3ioh_A Histo-blood group ABO s 22.0 4.3E+02 0.015 26.1 9.7 110 120-245 123-272 (298)
No 1
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A
Probab=100.00 E-value=4.7e-41 Score=332.62 Aligned_cols=217 Identities=26% Similarity=0.435 Sum_probs=179.7
Q ss_pred CCeEEEEEEeecCCCCccchHHHHHHHHHHHHhCCCCcEEEEEcCCCCHHHHHHHHhhCCCEEEEEeccCCccccccc--
Q 011823 40 HKNAYATMMYMGTPRDYEFYVATRVMIRSLVRLHVDADIVVIASLDVPLRWVQALEQEDGAKVVRVENLNNPYKDQAN-- 117 (476)
Q Consensus 40 ~~~AYvTivy~~t~~dYeyl~ga~VL~~SL~~~ns~~dlvVlvt~~Is~e~~~~L~~~~g~~v~~V~~i~~p~~~~~~-- 117 (476)
+++||||++ +|+ +|+.|+.|+++||++++++++++++++++++++.+++|++ .|.+++.|+.++.+......
T Consensus 3 ~~~AyvTl~---td~--~Yl~ga~vL~~SL~~~~s~~~lvvLvt~~vs~~~~~~L~~-~~~~vi~V~~l~~~~~~~~~~~ 76 (263)
T 3u2u_A 3 TDQAFVTLT---TND--AYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLET-VFDEVIMVDVLDSGDSAHLTLM 76 (263)
T ss_dssp TTEEEEEEE---SSH--HHHHHHHHHHHHHHHTTCCSEEEEEECTTSCHHHHHHHHH-HSSEEEECCCCCCCCHHHHHHT
T ss_pred cceEEEEEE---ECH--HHHHHHHHHHHHHHHhCCCCCEEEEecCCCCHHHHHHHHH-cCCeEEEeeecCCcchhhhhhh
Confidence 589999998 444 5699999999999999999999999999999999999999 89999999877654321111
Q ss_pred ccchhhhhhHhhhhhhccCcCeEEEEcCCeecccCchhhhcCCCeeeeec--CCCCccceEEEEeCCHHHHHHHHHHHHh
Q 011823 118 FDRRFKLTLNKLYAWNLVDYDRVVMLDSDNLFLEKTDELFQCGQFCAVFI--NPCIFHTGLFVLQPSETVFKDMIHELET 195 (476)
Q Consensus 118 ~~~r~~~ty~KL~i~~L~eydRVLYLDaD~LVl~nLdeLFd~~~~~Aa~d--~P~yFNSGVmvInps~~~f~~lle~l~~ 195 (476)
...++..+|+|+.+|++++||||||||+|++|++|+||||+++.++|++| +|+||||||||+||+.++++++++.+.+
T Consensus 77 ~rp~~~~~~~kl~~~~l~~~~~vlylD~D~~v~~~~~~Lf~~~~~aA~~d~~~~~~fNsGv~li~p~~~~~~~l~~~~~~ 156 (263)
T 3u2u_A 77 KRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFDREELSAAPDPGWPDCFNSGVFVYQPSVETYNQLLHLASE 156 (263)
T ss_dssp TCTTGGGGGGGGGGGGCTTCSEEEEECTTEEECSCCGGGGGSCSSEEEECTTSTTSEEEEEEEECCCHHHHHHHHHHHHH
T ss_pred cCcchhHHhHHHHhccccCcceEEEEcCCEeeccCHHHHhCCCcceEeccCCCCccccCeEEEEcccHHHHHHHHHHHHh
Confidence 12346789999999999999999999999999999999999999999987 5799999999999999999999998865
Q ss_pred CCCCCCCCchhHHhcccCCCCCCCccCCCCCCCCCCCceeCCccccccchhccc-ccccCCCCCCCeEEEeeCCCCCCCC
Q 011823 196 GRENPDGADQGFIASYFPDLLDKPMFHPSLNGTKLEGHYRLPLGYQMDASYYYL-RLRWSVPCGPNSVITFPGAPWLKPW 274 (476)
Q Consensus 196 ~~~~~~~~DQDiLN~~f~d~~~~~lf~p~~~~~~ld~~~rLp~~YN~~~~~~yl-~~~w~~~~~~~~IIHFtg~p~~KPW 274 (476)
.+++.++|||+||.+|.+|..+ +.+++||.+||++....|. ...+....++++||||+|. .|||
T Consensus 157 -~~~~~~~DQd~LN~~f~~w~~~------------~~~~~Lp~~yN~~~~~~y~~~~~~~~~~~~~~IIHf~g~--~KPW 221 (263)
T 3u2u_A 157 -QGSFDGGDQGILNTFFSSWATT------------DIRKHLPFIYNLSSISIYSYLPAFKVFGASAKVVHFLGR--VKPW 221 (263)
T ss_dssp -HCCTTSSHHHHHHHHTTTTTTS------------CGGGBCCGGGSEEHHHHHSSHHHHHHHGGGCSEEECCSS--SCGG
T ss_pred -cCCCCcccHHHHHHHhcccccc------------CeeEeCCcccccccchhccccHHHHhhcCCeEEEEECCC--CcCC
Confidence 3568899999999999985321 2578999999999763321 1122111356799999998 7999
Q ss_pred ccc
Q 011823 275 YWW 277 (476)
Q Consensus 275 ~~w 277 (476)
+..
T Consensus 222 ~~~ 224 (263)
T 3u2u_A 222 NYT 224 (263)
T ss_dssp GSE
T ss_pred CCC
Confidence 964
No 2
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*
Probab=100.00 E-value=6.4e-37 Score=312.14 Aligned_cols=216 Identities=26% Similarity=0.438 Sum_probs=176.0
Q ss_pred CCeEEEEEEeecCCCCccchHHHHHHHHHHHHhCCCCcEEEEEcCCCCHHHHHHHHhhCCCEEEEEeccCCccccccc--
Q 011823 40 HKNAYATMMYMGTPRDYEFYVATRVMIRSLVRLHVDADIVVIASLDVPLRWVQALEQEDGAKVVRVENLNNPYKDQAN-- 117 (476)
Q Consensus 40 ~~~AYvTivy~~t~~dYeyl~ga~VL~~SL~~~ns~~dlvVlvt~~Is~e~~~~L~~~~g~~v~~V~~i~~p~~~~~~-- 117 (476)
+++||||++ +|+ +|+.++.|+++||++++++++++++++++++++.+++|++ .+.+++.|+.++.+......
T Consensus 2 s~~a~vt~~---~d~--~Yl~~a~vl~~SL~~~~s~~~l~vlv~~~is~~~~~~L~~-~~~~v~~v~~l~~~~~~~~~~~ 75 (333)
T 1ll2_A 2 TDQAFVTLT---TND--AYAKGALVLGSSLKQHRTSRRLAVLTTPQVSDTMRKALEI-VFDEVITVDILDSGDSAHLTLM 75 (333)
T ss_dssp CSEEEEEEE---SSH--HHHHHHHHHHHHHHHTTCCSEEEEEECTTSCHHHHHHHHH-HCSEEEECCTTSTTSTTHHHHH
T ss_pred CceEEEEEE---eCH--HHHHHHHHHHHHHHHhCCCCCEEEEEcCCCCHHHHHHHHH-hCCEEEEEeecCCcchhhcccc
Confidence 689999998 444 5689999999999999999999999999999999999999 78888888876544321111
Q ss_pred ccchhhhhhHhhhhhhccCcCeEEEEcCCeecccCchhhhcCCCeeeeec--CCCCccceEEEEeCCHHHHHHHHHHHHh
Q 011823 118 FDRRFKLTLNKLYAWNLVDYDRVVMLDSDNLFLEKTDELFQCGQFCAVFI--NPCIFHTGLFVLQPSETVFKDMIHELET 195 (476)
Q Consensus 118 ~~~r~~~ty~KL~i~~L~eydRVLYLDaD~LVl~nLdeLFd~~~~~Aa~d--~P~yFNSGVmvInps~~~f~~lle~l~~ 195 (476)
...++..+|+||++|++.+||||||||||++|++||||||+++.++|+++ +|+||||||||+||+.+.++++++.+.+
T Consensus 76 ~~~~~~~t~~Kl~i~~l~~ydrvlYLDaD~lv~~di~eLf~~~~~aAv~d~~~~~~fNsGvmlin~~~~~~~~l~~~~~~ 155 (333)
T 1ll2_A 76 KRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFEREELSAAPDPGWPDCFNSGVFVYQPSVETYNQLLHVASE 155 (333)
T ss_dssp HCGGGHHHHHHGGGGGCTTCSEEEEECTTEEECSCCGGGGGSCSSEEEECSSSTTSEEEEEEEECCCHHHHHHHHHHHHH
T ss_pred cccchHHHHHHHHHhHhcCCCeEEEEeCCEEeccCHHHHhCCCceeEEecCCCCcceeeeEEEEeCCHHHHHHHHHHHHh
Confidence 12345689999999999999999999999999999999999999999986 5899999999999999999999998765
Q ss_pred CCCCCCCCchhHHhcccCCCCCCCccCCCCCCCCCCCceeCCccccccchhc--ccccccCCCCCCCeEEEeeCCCCCCC
Q 011823 196 GRENPDGADQGFIASYFPDLLDKPMFHPSLNGTKLEGHYRLPLGYQMDASYY--YLRLRWSVPCGPNSVITFPGAPWLKP 273 (476)
Q Consensus 196 ~~~~~~~~DQDiLN~~f~d~~~~~lf~p~~~~~~ld~~~rLp~~YN~~~~~~--yl~~~w~~~~~~~~IIHFtg~p~~KP 273 (476)
.+.+.++|||+||.+|.+|... +.+.+||.+||++.+.. +.+ .+....++++||||+|. .||
T Consensus 156 -~~~~~~~DQ~~LN~~f~~~~~~------------~~~~~Lp~~yN~~~~~~~~~~p-~~~~~~~~~~IiHf~g~--~KP 219 (333)
T 1ll2_A 156 -QGSFDGGDQGLLNTFFNSWATT------------DIRKHLPFIYNLSSISIYSYLP-AFKAFGANAKVVHFLGQ--TKP 219 (333)
T ss_dssp -TCCTTSSHHHHHHHHTTTTTTS------------CGGGBCCGGGSEETTHHHHTHH-HHHHHGGGCSEEECCSS--CCG
T ss_pred -cCCCCCCCHHHHHHHHHhhccc------------CccccCCcHHhcccccchhccH-HHHhhcCCCEEEEECCC--CCC
Confidence 3567889999999999874211 12479999999997632 222 11111356799999997 799
Q ss_pred Cccc
Q 011823 274 WYWW 277 (476)
Q Consensus 274 W~~w 277 (476)
|+..
T Consensus 220 W~~~ 223 (333)
T 1ll2_A 220 WNYT 223 (333)
T ss_dssp GGSC
T ss_pred CCCC
Confidence 9864
No 3
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=99.98 E-value=1.7e-32 Score=272.31 Aligned_cols=225 Identities=16% Similarity=0.215 Sum_probs=158.0
Q ss_pred EEEEeecCCCCccchHHHHHHHHHHHHhCCCCcEEE-EEcCCCCHHHHHHHHhh---CCCEEEEEeccCCcccccccccc
Q 011823 45 ATMMYMGTPRDYEFYVATRVMIRSLVRLHVDADIVV-IASLDVPLRWVQALEQE---DGAKVVRVENLNNPYKDQANFDR 120 (476)
Q Consensus 45 vTivy~~t~~dYeyl~ga~VL~~SL~~~ns~~dlvV-lvt~~Is~e~~~~L~~~---~g~~v~~V~~i~~p~~~~~~~~~ 120 (476)
++++++ +|+ .|+.++.|+++||++++++.++.+ ++++++++++++.|++. .|.++..++.-+.... .....+
T Consensus 6 i~I~~~-~d~--~Y~~~~~v~i~Sl~~~~~~~~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~~~~~~~~-~~~~~~ 81 (276)
T 3tzt_A 6 DALLLT-LDE--NYIPQMKVLMTSIYINNPGRIFDVYLIHSRISEDKLKDLGEDLKKFSYTLYPIRATDDLFS-FAKVTD 81 (276)
T ss_dssp EEEEEE-CCG--GGHHHHHHHHHHHHHHSTTCCEEEEEEESCCCHHHHHHHHHHHHTTTCEEEEEECC------------
T ss_pred EEEEEE-eCH--hHHHHHHHHHHHHHHhCCCCceEEEEEeCCCCHHHHHHHHHHHHHcCCEEEEEEeCHHHHh-cCcccc
Confidence 466666 555 458999999999999998777666 35789999999888875 5777765542221111 111234
Q ss_pred hh-hhhhHhhhhhhcc--CcCeEEEEcCCeecccCchhhhcCC----CeeeeecC-----------------CCCccceE
Q 011823 121 RF-KLTLNKLYAWNLV--DYDRVVMLDSDNLFLEKTDELFQCG----QFCAVFIN-----------------PCIFHTGL 176 (476)
Q Consensus 121 r~-~~ty~KL~i~~L~--eydRVLYLDaD~LVl~nLdeLFd~~----~~~Aa~d~-----------------P~yFNSGV 176 (476)
|+ ..+|.||+++++. ++|||||||+|++|++|++|||+.+ .++|+.+. .+||||||
T Consensus 82 ~~s~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~di~~L~~~dl~~~~~aav~d~~~~~~~~~~~~~~l~~~~~yfNsGV 161 (276)
T 3tzt_A 82 RYPKEMYYRLLAGEFLPENLGEILYLDPDMLVINPLDDLLRTDISDYILAAASHTGKTDMANNVNRIRLGTDTDYYNSGL 161 (276)
T ss_dssp --CHHHHHHHTHHHHSCTTCCEEEEECSSEEECSCSHHHHTCCCTTSSEEEEEC--------------------CEEEEE
T ss_pred ccCHHHHHHHHHHHHcccccCeEEEEeCCeeecCCHHHHhhcCCCCCeEEEEEecccchHHHHHHHhcCCCCCCeEEeeE
Confidence 55 5899999999974 6999999999999999999999986 46776541 27999999
Q ss_pred EEEeCCHHHH----HHHHHHHHhCCCCCCCCchhHHhcccCCCCCCCccCCCCCCCCCCCceeCCc-cccccchhcc---
Q 011823 177 FVLQPSETVF----KDMIHELETGRENPDGADQGFIASYFPDLLDKPMFHPSLNGTKLEGHYRLPL-GYQMDASYYY--- 248 (476)
Q Consensus 177 mvInps~~~f----~~lle~l~~~~~~~~~~DQDiLN~~f~d~~~~~lf~p~~~~~~ld~~~rLp~-~YN~~~~~~y--- 248 (476)
||+|+++++. +++++.+.+.+.+..++|||+||.+|.+ .++.||. +||++.+++.
T Consensus 162 ~linl~~~R~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~f~~-----------------~~~~Lp~~~wN~~~~~~~~~~ 224 (276)
T 3tzt_A 162 LLINLKRAREEIDPDEIFSFVEDNHMNLLLPDQDILNAMYGD-----------------RIYPLDDLIYNYDARNYSSYL 224 (276)
T ss_dssp EEEEHHHHHHHCCHHHHHHHHHHC--------CHHHHHHHGG-----------------GEEEEEHHHHSEETTCHHHHH
T ss_pred EEEEHHHHHhhhHHHHHHHHHHhccccccCCChhHHHHHHhC-----------------CEEECCchheeeecccchhhh
Confidence 9999998665 4555655555556778999999999987 6999998 9999986431
Q ss_pred c-c-cccCC--CCCCCeEEEeeCCCCCCCCcccccCcccchhhhHHHHHH
Q 011823 249 L-R-LRWSV--PCGPNSVITFPGAPWLKPWYWWSWPVLPLGIEWHKHRLQ 294 (476)
Q Consensus 249 l-~-~~w~~--~~~~~~IIHFtg~p~~KPW~~ws~p~~~l~~~W~~~r~~ 294 (476)
. + .+++. ..++++||||+|. .|||+..+ ..++...|..|...
T Consensus 225 ~~~~~~~~~~~~~~~~~iiHy~g~--~KPW~~~~--~~~~~~~w~~Y~~~ 270 (276)
T 3tzt_A 225 IRSKKQADLAWLMDHTVVLHFCGR--DKPWKKNH--RNKFTSLYKHYMSL 270 (276)
T ss_dssp HHTTTCCSHHHHHHHCCEEECCSS--CCTTSTTC--CSTTHHHHHHHHHH
T ss_pred ccccchhhhhhhccCCeEEEECCC--CCCcCCCC--CCchHHHHHHHHHH
Confidence 1 1 11111 1245799999998 79999866 67889999988743
No 4
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=99.97 E-value=2.7e-30 Score=259.78 Aligned_cols=221 Identities=16% Similarity=0.191 Sum_probs=155.9
Q ss_pred EEEeecCCCCccchHHHHHHHHHH-HHhCCCCcEEE-EEcCCCCHHHHHHHHhh---CCCEEEEEeccCCcccccccc-c
Q 011823 46 TMMYMGTPRDYEFYVATRVMIRSL-VRLHVDADIVV-IASLDVPLRWVQALEQE---DGAKVVRVENLNNPYKDQANF-D 119 (476)
Q Consensus 46 Tivy~~t~~dYeyl~ga~VL~~SL-~~~ns~~dlvV-lvt~~Is~e~~~~L~~~---~g~~v~~V~~i~~p~~~~~~~-~ 119 (476)
+++.+ +|+ .|+.++.|+++|| +++ ++.++.+ ++++++++++++.|++. .|.++..++ ++......... .
T Consensus 2 ~I~~~-~d~--~Y~~~~~vli~Sl~l~~-~~~~~~f~il~~~ls~~~~~~L~~~~~~~~~~i~~~~-~~~~~~~~~~~~~ 76 (311)
T 1g9r_A 2 DIVFA-ADD--NYAAYLCVAAKSVEAAH-PDTEIRFHVLDAGISEANRAAVAANLRGGGGNIRFID-VNPEDFAGFPLNI 76 (311)
T ss_dssp EEEEE-ECG--GGHHHHHHHHHHHHHTC-TTSCCEEEEEESSCCHHHHHHHHHHSGGGTTTEEEEE-CCGGGGTTSCCCC
T ss_pred eEEEE-CCH--hHHHHHHHHHHHHHHHc-CCCCceEEEEECCCCHHHHHHHHHHHHHcCCEEEEEE-cCHHHHhcCcccc
Confidence 45555 555 4689999999999 554 3444443 24788999999999874 366554443 22111111111 2
Q ss_pred chh-hhhhHhhhhhhc-cCcCeEEEEcCCeecccCchhhhcCC----Ceeeeec-----------------CCCCccceE
Q 011823 120 RRF-KLTLNKLYAWNL-VDYDRVVMLDSDNLFLEKTDELFQCG----QFCAVFI-----------------NPCIFHTGL 176 (476)
Q Consensus 120 ~r~-~~ty~KL~i~~L-~eydRVLYLDaD~LVl~nLdeLFd~~----~~~Aa~d-----------------~P~yFNSGV 176 (476)
+++ ..+|.|++++++ .++|||||||||++|++||+|||+.+ .++|+.| ..+||||||
T Consensus 77 ~~~s~~~y~Rl~l~~ll~~~~kvlyLD~D~iv~~di~eL~~~~l~~~~~aav~d~~~~~~~~~~~~~~~~~~~~yfNsGv 156 (311)
T 1g9r_A 77 RHISITTYARLKLGEYIADCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGASIDLFVERQEGYKQKIGMADGEYYFNAGV 156 (311)
T ss_dssp TTCCGGGGGGGGHHHHCCSCSCEEEECSSEEECSCCHHHHTCCCTTCSEEEEECHHHHTSTTHHHHTTCCTTSCCEEEEE
T ss_pred ccCCHHHHHHHHHHHHhhhcCEEEEEcCCeEeccCHHHHhccCCCCcEEEEEeccchhhhHHHHHhcCCCCCCceEeeee
Confidence 343 589999999995 78999999999999999999999986 3566653 136999999
Q ss_pred EEEeCCHH----HHHHHHHHHHhCCCCCCCCchhHHhcccCCCCCCCccCCCCCCCCCCCceeCCccccccchhcccccc
Q 011823 177 FVLQPSET----VFKDMIHELETGRENPDGADQGFIASYFPDLLDKPMFHPSLNGTKLEGHYRLPLGYQMDASYYYLRLR 252 (476)
Q Consensus 177 mvInps~~----~f~~lle~l~~~~~~~~~~DQDiLN~~f~d~~~~~lf~p~~~~~~ld~~~rLp~~YN~~~~~~yl~~~ 252 (476)
||+|++.+ ..+++++.+.+.+++..++|||+||.+|.+ .+..||.+||++...+.....
T Consensus 157 ~linl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~lN~~f~~-----------------~~~~Lp~~wN~~~~~~~~~~~ 219 (311)
T 1g9r_A 157 LLINLKKWRRHDIFKMSSEWVEQYKDVMQYQDQDILNGLFKG-----------------GVCYANSRFNFMPTNYAFMAN 219 (311)
T ss_dssp EEECHHHHTTSCHHHHHHHHHHHHTTTCSSHHHHHHHHHHTT-----------------SEEEECGGGSBCHHHHHTCC-
T ss_pred eeeeHHHHHhcchHHHHHHHHHhccCcCccCCcCHHHHHHcC-----------------CEEEcChhhccCcchhhHHhh
Confidence 99999865 456777777665566788999999999987 699999999999754321000
Q ss_pred ---------c----CCCCCCCeEEEeeCCCCCCCCcccccCcccchhhhHHHH
Q 011823 253 ---------W----SVPCGPNSVITFPGAPWLKPWYWWSWPVLPLGIEWHKHR 292 (476)
Q Consensus 253 ---------w----~~~~~~~~IIHFtg~p~~KPW~~ws~p~~~l~~~W~~~r 292 (476)
| ....++++||||+|. .|||+.++ ..+....|+.+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~iiHy~g~--~KPW~~~~--~~~~~~~~~~~~ 268 (311)
T 1g9r_A 220 WFASRHTDPLYRDRTNTVMPVAVSHYCGP--AKPWHRDC--TAWGAERFTELA 268 (311)
T ss_dssp ---CSCCCHHHHHHHSCCSSCSEEECCSS--CCTTSSSC--CSTTTHHHHHHH
T ss_pred hcccccchhhhhHHhhccCCCEEEEeCCc--CCCCCCCC--CCccHHHHHHHH
Confidence 1 112346799999997 79999765 334445565555
No 5
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=50.65 E-value=1.2e+02 Score=27.28 Aligned_cols=92 Identities=9% Similarity=0.094 Sum_probs=47.2
Q ss_pred HHHHHHHHHHhCCCCcE-EEEEcCCCCHHHHHHHHhh-CCCEEEEEeccCCcccccccccchhhhhhHhhhhhhccCcCe
Q 011823 62 TRVMIRSLVRLHVDADI-VVIASLDVPLRWVQALEQE-DGAKVVRVENLNNPYKDQANFDRRFKLTLNKLYAWNLVDYDR 139 (476)
Q Consensus 62 a~VL~~SL~~~ns~~dl-vVlvt~~Is~e~~~~L~~~-~g~~v~~V~~i~~p~~~~~~~~~r~~~ty~KL~i~~L~eydR 139 (476)
+.-++.|+.+.... ++ +++++++-++++.+.+++. ...++..+. .+........+.....-.+-...+..+.|-
T Consensus 16 l~~~l~Sl~~q~~~-~~eiivvDd~S~d~t~~~~~~~~~~~~i~~i~---~~~~~~~~~~~n~G~~~a~N~gi~~a~g~~ 91 (255)
T 1qg8_A 16 VAKSISSILSQTFS-DFELFIMDDNSNEETLNVIRPFLNDNRVRFYQ---SDISGVKERTEKTRYAALINQAIEMAEGEY 91 (255)
T ss_dssp HHHHHHHHHTCSCC-CEEEEEEECSCCHHHHHHHGGGGGSTTEEEEE---CCCCSHHHHHSSCHHHHHHHHHHHHCCCSE
T ss_pred HHHHHHHHHhccCC-ceEEEEEECCCCchHHHHHHHHhhcCCEEEEe---cccccccccccccCHHHHHHHHHHHcCCCE
Confidence 33567888764322 33 3345666677788888773 122232222 110000000001112223333445567899
Q ss_pred EEEEcCCeecccC-chhhh
Q 011823 140 VVMLDSDNLFLEK-TDELF 157 (476)
Q Consensus 140 VLYLDaD~LVl~n-LdeLF 157 (476)
|++||+|.++..+ +..+.
T Consensus 92 i~~lD~Dd~~~~~~l~~~~ 110 (255)
T 1qg8_A 92 ITYATDDNIYMPDRLLKMV 110 (255)
T ss_dssp EEEEETTEEECTTHHHHHH
T ss_pred EEEeCCCCccChHHHHHHH
Confidence 9999999999766 44443
No 6
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=43.82 E-value=2.1e+02 Score=31.57 Aligned_cols=25 Identities=16% Similarity=0.189 Sum_probs=19.1
Q ss_pred hccCcCeEEEEcCCeecccC-chhhh
Q 011823 133 NLVDYDRVVMLDSDNLFLEK-TDELF 157 (476)
Q Consensus 133 ~L~eydRVLYLDaD~LVl~n-LdeLF 157 (476)
+..+.|-|+.+|+|+.+..| +.++.
T Consensus 235 ~~a~gd~Il~lDaD~~~~pd~L~~lv 260 (802)
T 4hg6_A 235 ERLKGELVVVFDADHVPSRDFLARTV 260 (802)
T ss_dssp HHCCCSEEEECCTTEEECTTHHHHHH
T ss_pred HhcCCCEEEEECCCCCcChHHHHHHH
Confidence 44578999999999999766 44443
No 7
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=40.96 E-value=34 Score=30.59 Aligned_cols=99 Identities=10% Similarity=0.140 Sum_probs=49.7
Q ss_pred CCeEEEEEEeecCCCCccchHHHHHHHHHHHHhC-CCCcEEEEEcCCCCHHHHHHHHhh--CCCEEEEEeccCCcccccc
Q 011823 40 HKNAYATMMYMGTPRDYEFYVATRVMIRSLVRLH-VDADIVVIASLDVPLRWVQALEQE--DGAKVVRVENLNNPYKDQA 116 (476)
Q Consensus 40 ~~~AYvTivy~~t~~dYeyl~ga~VL~~SL~~~n-s~~dlvVlvt~~Is~e~~~~L~~~--~g~~v~~V~~i~~p~~~~~ 116 (476)
.+...+...|.. . ++ +.-++.||.+.. ++.++ ++++++-++++.+.+++. ...++..+. .+...
T Consensus 5 p~vsViIp~yn~--~--~~---l~~~l~Sl~~q~~~~~ei-IvvDd~S~d~t~~~~~~~~~~~~~i~~i~---~~n~G-- 71 (240)
T 3bcv_A 5 PKVSVIVPIYNV--E--KY---LDQCVQALLAQTLSDIEI-ILIDDESPDNCPKICDDYAAQYPNIKVIH---KKNAG-- 71 (240)
T ss_dssp CSEEEEEEESSC--T--TT---HHHHHHHHHTCSSSSEEE-EEEECCCSSSHHHHHHHHHHHCSSEEEEE---CCCCC--
T ss_pred CcEEEEEecCCC--H--HH---HHHHHHHHHhCcCCCeEE-EEEECCCCcCHHHHHHHHHhhCCCEEEEE---CCCCC--
Confidence 345566666542 1 22 335678887643 22333 335555455555555542 122233232 11110
Q ss_pred cccchhhhhhHhhhhhhccCcCeEEEEcCCeecccC-chhhhc
Q 011823 117 NFDRRFKLTLNKLYAWNLVDYDRVVMLDSDNLFLEK-TDELFQ 158 (476)
Q Consensus 117 ~~~~r~~~ty~KL~i~~L~eydRVLYLDaD~LVl~n-LdeLFd 158 (476)
. .-.|=...+..+-|-|++||+|.++..+ ++++.+
T Consensus 72 -----~--~~a~N~g~~~a~g~~i~~lD~Dd~~~~~~l~~l~~ 107 (240)
T 3bcv_A 72 -----L--GMACNSGLDVATGEYVAFCDSDDYVDSDMYMTMYN 107 (240)
T ss_dssp -----H--HHHHHHHHHHCCSSEEEECCTTCCCCTTHHHHHHH
T ss_pred -----h--HHHHHHHHHHcCCCEEEEECCCCcCCHHHHHHHHH
Confidence 1 1122233344567999999999998766 444443
No 8
>1o7q_A N-acetyllactosaminide alpha-1,3- galactosyltransferase; 3-galactosyltransferase-UDP complex, glycosyltransferase, glycoprotein, transmembrane; HET: GAL NAG UDP; 1.3A {Bos taurus} SCOP: c.68.1.9 PDB: 1gwv_A* 1gx0_A* 1gww_A* 1k4v_A* 1gx4_A* 2jco_A 1g8o_A* 1fg5_N* 1g93_A* 2wgz_A* 1o7o_A* 2vs4_A* 2jck_A* 2jcl_A 2vfz_A* 2vs3_A* 1vzu_A* 1vzx_A* 1vzt_A* 2jcj_A* ...
Probab=37.39 E-value=2.1e+02 Score=28.12 Aligned_cols=110 Identities=18% Similarity=0.314 Sum_probs=66.7
Q ss_pred chh-hhhhHhhhhhh-------ccCcCeEEEEcCCeecccCchhhhcCCCeeeee---------------cCC-------
Q 011823 120 RRF-KLTLNKLYAWN-------LVDYDRVVMLDSDNLFLEKTDELFQCGQFCAVF---------------INP------- 169 (476)
Q Consensus 120 ~r~-~~ty~KL~i~~-------L~eydRVLYLDaD~LVl~nLdeLFd~~~~~Aa~---------------d~P------- 169 (476)
+|| ..+..|+.+.. +.++|=+..+|+|+++.+++..= .++...|+. .+|
T Consensus 114 ~~W~d~sm~Rm~~i~~~~~~~~~~evDYLf~~dvd~~F~~~vG~E-~Lg~lv~~lHp~~y~~~~~~fpYERrp~S~AyIp 192 (289)
T 1o7q_A 114 KRWQDISMMRMKTIGEHIVAHIQHEVDFLFCMDVDQVFQDKFGVE-TLGESVAQLQAWWYKADPNDFTYERRKESAAYIP 192 (289)
T ss_dssp SSHHHHHHHHHHHHHHHHHHTHHHHCSEEEEECSSEEECSCBCGG-GCSSEEEEECTTTTTSCGGGSCCCCCTTSTTCCC
T ss_pred cCCchhHHHHHHHHHHHHHHHHhhcCCEEEEeeCCcEeeccCCHH-HHHHHHHccCHHHhCCCCCCCCCCCCcCceeeec
Confidence 345 35666666543 24799999999999999987542 122222221 011
Q ss_pred -----CCccceEEEEeCC------HHHHHHHHHHHHhCCCCCCCCchhHHhcccCCCCCCCccCCCCCCCCCCCceeCCc
Q 011823 170 -----CIFHTGLFVLQPS------ETVFKDMIHELETGRENPDGADQGFIASYFPDLLDKPMFHPSLNGTKLEGHYRLPL 238 (476)
Q Consensus 170 -----~yFNSGVmvInps------~~~f~~lle~l~~~~~~~~~~DQDiLN~~f~d~~~~~lf~p~~~~~~ld~~~rLp~ 238 (476)
-|+.+|+.-=.+. +...+.|++..+++- .-..+|..=||.||-. ++ ..+-||.
T Consensus 193 ~~eGdfYY~Ga~fGGt~~~vl~l~~~c~~~i~~D~~n~I-~A~wHDESHLNKYf~~--~K-------------PtKvLSP 256 (289)
T 1o7q_A 193 FGEGDFYYHAAIFGGTPTQVLNITQECFKGILKDKKNDI-EAQWHDESHLNKYFLL--NK-------------PTKILSP 256 (289)
T ss_dssp TTCCSCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTC-CCTTTHHHHHHHHHHH--SC-------------CSEEECG
T ss_pred CCCCCEEEEceeeCCcHHHHHHHHHHHHHHHHHHHhCCe-EEEecchhhhhHHHhh--cC-------------CCEEECH
Confidence 4777887744432 333444444443322 2256899999999743 33 2567999
Q ss_pred cccccchh
Q 011823 239 GYQMDASY 246 (476)
Q Consensus 239 ~YN~~~~~ 246 (476)
.|+.+.+.
T Consensus 257 EY~wd~~~ 264 (289)
T 1o7q_A 257 EYCWDYHI 264 (289)
T ss_dssp GGSBCGGG
T ss_pred HHCCCccc
Confidence 99988653
No 9
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=37.27 E-value=1.2e+02 Score=31.93 Aligned_cols=87 Identities=13% Similarity=0.003 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHhCCCC-c-EEEEEcCCCCHHH-HHHHHhh--CCCEEEEEeccCCcccccccccchhhhhhHhhhhhhcc
Q 011823 61 ATRVMIRSLVRLHVDA-D-IVVIASLDVPLRW-VQALEQE--DGAKVVRVENLNNPYKDQANFDRRFKLTLNKLYAWNLV 135 (476)
Q Consensus 61 ga~VL~~SL~~~ns~~-d-lvVlvt~~Is~e~-~~~L~~~--~g~~v~~V~~i~~p~~~~~~~~~r~~~ty~KL~i~~L~ 135 (476)
-+.-++.|+.+..... + -+|+++++-++++ .+.+++. ...++..+. .+.. ....-.+-...+..
T Consensus 127 ~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~~~v~vi~---~~~n--------~G~~~A~N~G~~~A 195 (570)
T 2d7i_A 127 SLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALFPSVRILR---TKKR--------EGLIRTRMLGASVA 195 (570)
T ss_dssp HHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTSTTEEEEE---CSSC--------CCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHHhCCeEEEEE---CCCC--------CCHHHHHHHHHHhc
Confidence 3556778888765432 2 2444555544444 4555442 122232222 1110 01122333444455
Q ss_pred CcCeEEEEcCCeecccC-chhhhc
Q 011823 136 DYDRVVMLDSDNLFLEK-TDELFQ 158 (476)
Q Consensus 136 eydRVLYLDaD~LVl~n-LdeLFd 158 (476)
.-|-|++||+|+.+..+ |.+|.+
T Consensus 196 ~gd~i~fLD~D~~~~p~~L~~ll~ 219 (570)
T 2d7i_A 196 TGDVITFLDSHCEANVNWLPPLLD 219 (570)
T ss_dssp CSSEEEECCSSEEECTTCSHHHHH
T ss_pred CCCEEEEEcCCccccccHHHHHHH
Confidence 68999999999999765 555554
No 10
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=34.11 E-value=1.7e+02 Score=28.11 Aligned_cols=104 Identities=16% Similarity=0.003 Sum_probs=56.9
Q ss_pred CCCeEEEEEEeecCCCCccchHHHHHHHHHHHHhC-CCCcEEEEEcCCCCHHHHHHHHhhCCCEEEE-EeccC-Cccccc
Q 011823 39 RHKNAYATMMYMGTPRDYEFYVATRVMIRSLVRLH-VDADIVVIASLDVPLRWVQALEQEDGAKVVR-VENLN-NPYKDQ 115 (476)
Q Consensus 39 ~~~~AYvTivy~~t~~dYeyl~ga~VL~~SL~~~n-s~~dlvVlvt~~Is~e~~~~L~~~~g~~v~~-V~~i~-~p~~~~ 115 (476)
..+...+.-+|.. . ++ +.-++.|+.+.. +...-+++++++-++++.+.+++ .+.++.. +..+. .+.
T Consensus 47 ~~~vSViIp~yN~--~--~~---l~~~l~sl~~q~~~~~~eiivVDdgS~D~t~~~~~~-~~~~~~~~~~~~~~~~~--- 115 (329)
T 3ckj_A 47 GRTISVVLPALDE--E--DT---IGSVIDSISPLVDGLVDELIVLDSGSTDDTEIRAVA-AGARVVSREQALPEVPI--- 115 (329)
T ss_dssp TCCEEEEEEESSC--T--TT---HHHHHHHHGGGBTTTBSEEEEEECSCCSSHHHHHHH-TTCEEEEHHHHCTTSCC---
T ss_pred CCcEEEEEeeCCC--H--HH---HHHHHHHHHHhhCCCCcEEEEEeCCCCchHHHHHHH-hhhhhccceeeeccCCC---
Confidence 3456666666642 1 12 345678888764 32122444566666677888888 6766432 22221 111
Q ss_pred ccccchhhhhhHhhhhhhccCcCeEEEEcCCee-cccC-chhhhc
Q 011823 116 ANFDRRFKLTLNKLYAWNLVDYDRVVMLDSDNL-FLEK-TDELFQ 158 (476)
Q Consensus 116 ~~~~~r~~~ty~KL~i~~L~eydRVLYLDaD~L-Vl~n-LdeLFd 158 (476)
+... ...+-...+..+.|-|+++|+|.+ +..+ +.++.+
T Consensus 116 ---n~G~--~~a~n~g~~~a~gd~i~~lD~D~~~~~p~~l~~l~~ 155 (329)
T 3ckj_A 116 ---RPGK--GEALWRSLAASRGDIVVFVDSDLINPHPMFVPWLVG 155 (329)
T ss_dssp ---CCSH--HHHHHHHHHHCCCSEEEECCTTEESCCTTHHHHHHH
T ss_pred ---CCCH--HHHHHHHHHhCCCCEEEEECCCCCCcChHHHHHHHH
Confidence 1111 122223334567899999999999 6544 565543
No 11
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=33.40 E-value=1.3e+02 Score=29.94 Aligned_cols=93 Identities=17% Similarity=0.244 Sum_probs=49.7
Q ss_pred HHHHHHHHHHhCCCC--cEEEEEcCCCCHHHHHHHHhhCCCEEEEEe--ccCCccccccc--cc------chhhhhhHhh
Q 011823 62 TRVMIRSLVRLHVDA--DIVVIASLDVPLRWVQALEQEDGAKVVRVE--NLNNPYKDQAN--FD------RRFKLTLNKL 129 (476)
Q Consensus 62 a~VL~~SL~~~ns~~--dlvVlvt~~Is~e~~~~L~~~~g~~v~~V~--~i~~p~~~~~~--~~------~r~~~ty~KL 129 (476)
+.-++.||++..+.. ..+++.+|+-.++.++.+++ .+.++.-+. .+........+ .. .+.....+
T Consensus 16 l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~~~vi~~-~~~~I~~~~~~d~~~~~~~~~N~g~~~y~~ia~h~~~al~-- 92 (343)
T 1fo8_A 16 VRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQVIAS-YGSAVTHIRQPDLSNIAVQPDHRKFQGYYKIARHYRWALG-- 92 (343)
T ss_dssp HHHHHHHHHHHCSCTTTSCEEEEECTTCHHHHHHHHT-TGGGSEEEECSCCCCCCCCTTCGGGHHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHhcCCCcCCcEEEEEECCCCHHHHHHHHH-cCCceEEEEcCCccccccchhhcCcccchhHhHHHHHHHH--
Confidence 567788999887432 34555566667888888887 543322221 11100000000 00 00111111
Q ss_pred hhhhccCcCeEEEEcCCeecccCchhhh
Q 011823 130 YAWNLVDYDRVVMLDSDNLFLEKTDELF 157 (476)
Q Consensus 130 ~i~~L~eydRVLYLDaD~LVl~nLdeLF 157 (476)
.+++..++++||.||-|+++-.|.=+-|
T Consensus 93 ~vf~~~~~~~vIiLEDDl~~spdF~~y~ 120 (343)
T 1fo8_A 93 QIFHNFNYPAAVVVEDDLEVAPDFFEYF 120 (343)
T ss_dssp HHHTTSCCSEEEEEETTEEECTTHHHHH
T ss_pred HHHHhccCCEEEEEcCCCeECHHHHHHH
Confidence 1233347999999999999988755444
No 12
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=25.08 E-value=3.8e+02 Score=26.83 Aligned_cols=102 Identities=10% Similarity=0.015 Sum_probs=50.9
Q ss_pred CCeEEEEEEeecCCCCccchHHHHHHHHHHHHhCCCC-cE-EEEEcCCCCH-HHHHHHHhh---CCCEEEEEeccCCccc
Q 011823 40 HKNAYATMMYMGTPRDYEFYVATRVMIRSLVRLHVDA-DI-VVIASLDVPL-RWVQALEQE---DGAKVVRVENLNNPYK 113 (476)
Q Consensus 40 ~~~AYvTivy~~t~~dYeyl~ga~VL~~SL~~~ns~~-dl-vVlvt~~Is~-e~~~~L~~~---~g~~v~~V~~i~~p~~ 113 (476)
.+...+...|. + + ..-+.-++.||.+..... +. +++++++=++ +..+.+++. ...++..+. .+..
T Consensus 29 p~vSVIIp~yN---~--~-~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~~~~v~vi~---~~~n 99 (472)
T 1xhb_A 29 PTTSVVIVFHN---E--A-WSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIR---MEQR 99 (472)
T ss_dssp CCEEEEEEESS---C--C-HHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEE---CSSC
T ss_pred CCeEEEEEeCC---C--C-HHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHHHCCCcEEEEE---CCCC
Confidence 34555555543 2 1 123445678888765432 12 3344443333 344555442 221333232 1110
Q ss_pred ccccccchhhhhhHhhhhhhccCcCeEEEEcCCeecccC-chhhhc
Q 011823 114 DQANFDRRFKLTLNKLYAWNLVDYDRVVMLDSDNLFLEK-TDELFQ 158 (476)
Q Consensus 114 ~~~~~~~r~~~ty~KL~i~~L~eydRVLYLDaD~LVl~n-LdeLFd 158 (476)
. ...-.+-...+....|-|++||+|..+..+ |.+|.+
T Consensus 100 ------~--G~~~a~N~g~~~A~gd~i~flD~D~~~~p~~L~~ll~ 137 (472)
T 1xhb_A 100 ------S--GLIRARLKGAAVSRGQVITFLDAHCECTAGWLEPLLA 137 (472)
T ss_dssp ------C--CHHHHHHHHHHHCCSSEEEEEESSEEECTTCHHHHHH
T ss_pred ------C--ChHHHHHHHHHhccCCeEEEECCCeEeCccHHHHHHH
Confidence 0 111223334445678999999999998776 555554
No 13
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=24.61 E-value=3.9e+02 Score=27.82 Aligned_cols=86 Identities=13% Similarity=0.079 Sum_probs=45.4
Q ss_pred HHHHHHHHHHhCCCCcEEE-EEcCCCCHHHHHHHHhhC-CCEEEEEeccCCcccccccccchhhhhhHhhhhhhccCcCe
Q 011823 62 TRVMIRSLVRLHVDADIVV-IASLDVPLRWVQALEQED-GAKVVRVENLNNPYKDQANFDRRFKLTLNKLYAWNLVDYDR 139 (476)
Q Consensus 62 a~VL~~SL~~~ns~~dlvV-lvt~~Is~e~~~~L~~~~-g~~v~~V~~i~~p~~~~~~~~~r~~~ty~KL~i~~L~eydR 139 (476)
+.-++.|+.+.....+.-| +++++-+++..+.+++.. ...+..+.. +.. .....-.+-...+..+.|-
T Consensus 108 l~~~l~sl~~q~~~~~~eiivvDd~s~d~t~~~~~~~~~~~~i~~i~~---~~~-------~~g~~~a~N~g~~~a~g~~ 177 (625)
T 2z86_A 108 LAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREFESLLNIKYVRQ---KDY-------GYQLCAVRNLGLRAAKYNY 177 (625)
T ss_dssp HHHHHHHHHTCCCSSCEEEEEEEESCSSCHHHHHHTTTTTSCEEEEEE---CCC-------SCCHHHHHHHHHHHCCSSE
T ss_pred HHHHHHHHHhhccCCCeEEEEEeCCCchhHHHHHHHhhhcCCeEEEEe---CCC-------CcchhHHHHHHHHhCCcCE
Confidence 4466788887643334433 345555556667777631 122222221 110 0001122223444567899
Q ss_pred EEEEcCCeecccC-chhhh
Q 011823 140 VVMLDSDNLFLEK-TDELF 157 (476)
Q Consensus 140 VLYLDaD~LVl~n-LdeLF 157 (476)
|+++|+|.++..+ +..+.
T Consensus 178 v~~lD~D~~~~~~~l~~~~ 196 (625)
T 2z86_A 178 VAILDCDMAPNPLWVQSYM 196 (625)
T ss_dssp EEEECTTEEECTTHHHHHH
T ss_pred EEEECCCCCCCHHHHHHHH
Confidence 9999999999765 44443
No 14
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=23.45 E-value=3.1e+02 Score=27.42 Aligned_cols=94 Identities=12% Similarity=-0.034 Sum_probs=48.2
Q ss_pred CCeEEEEEEeecCCCCccchHHHHHHHHHHHH----hCCCCcEEEEEcCCCCHHHHHHHHhhCCCEEEEEeccCCccccc
Q 011823 40 HKNAYATMMYMGTPRDYEFYVATRVMIRSLVR----LHVDADIVVIASLDVPLRWVQALEQEDGAKVVRVENLNNPYKDQ 115 (476)
Q Consensus 40 ~~~AYvTivy~~t~~dYeyl~ga~VL~~SL~~----~ns~~dlvVlvt~~Is~e~~~~L~~~~g~~v~~V~~i~~p~~~~ 115 (476)
.+...+--+|+. . +++. -++.|+.+ ...+.+ +++++|+=++++.+.+++ .+.+++..... -...
T Consensus 94 p~vSVVIP~yNe--~--~~l~---~~l~sl~~~l~~~~~~~E-IIVVDDgStD~T~~i~~~-~~~~v~~~~~~-~i~~-- 161 (387)
T 3f1y_A 94 LTVSAVLPSRNV--A--DTVG---GIIDEIHALNERAPLIDQ-ILVVDADSEDGTAGVAAS-HGAEVYSENEL-MSGY-- 161 (387)
T ss_dssp CCEEEEEEESSC--T--TTHH---HHHHHHHHHHHHSCCCSE-EEEEECSCSSSHHHHHHH-TTCEEEEGGGT-TGGG--
T ss_pred CeEEEEEEcCCC--H--HHHH---HHHHHHHHHHhcCCCCeE-EEEEcCcCCccHHHHHHH-hCchhccccee-EecC--
Confidence 455666666542 1 2233 34555544 223444 344566666677888888 77765432110 0000
Q ss_pred ccccchhhhhhHhhhhhhccCcCeEEEEcCCee
Q 011823 116 ANFDRRFKLTLNKLYAWNLVDYDRVVMLDSDNL 148 (476)
Q Consensus 116 ~~~~~r~~~ty~KL~i~~L~eydRVLYLDaD~L 148 (476)
..+. ...-.+-...+....|-|+++|+|..
T Consensus 162 -~~n~--G~g~A~n~G~~~A~gd~i~~lDaD~~ 191 (387)
T 3f1y_A 162 -GDAH--GKGDAMWRALSVTRGDLVLYIDADTR 191 (387)
T ss_dssp -CSCC--SHHHHHHHHTTTCCSSEEEECCTTCS
T ss_pred -CccC--CHHHHHHHHHHhcCCCEEEEEcCCCC
Confidence 0011 11122233344457899999999998
No 15
>2p6w_A VP54, putative glycosyltransferase (mannosyltransferase in glycosylating the PBCV-1 major...; HET: FLC; 1.60A {Paramecium bursaria chlorella virus 1} PDB: 2p72_A* 2p73_A*
Probab=22.88 E-value=2e+02 Score=26.88 Aligned_cols=59 Identities=14% Similarity=0.184 Sum_probs=35.8
Q ss_pred hhccCcCeEEEEcCCeeccc-----CchhhhcCCCeeee---ec-CC---CCccceEEEEeCCHHHHHHHH
Q 011823 132 WNLVDYDRVVMLDSDNLFLE-----KTDELFQCGQFCAV---FI-NP---CIFHTGLFVLQPSETVFKDMI 190 (476)
Q Consensus 132 ~~L~eydRVLYLDaD~LVl~-----nLdeLFd~~~~~Aa---~d-~P---~yFNSGVmvInps~~~f~~ll 190 (476)
-+..+.|-+-|||+|++|.. ++..-.+++..-.+ .+ .+ --.|+|++++..+.-..+++.
T Consensus 68 ~khPeAEWfWWLDsDAlIMDmnf~lPLe~yldl~~~NlvvHGw~e~~~~~~~lNtGvfL~~~~~~~irncq 138 (213)
T 2p6w_A 68 EKFPSTEWFLWLDSDVYVNPKNKNKPITSFIDLSDPNILYHTFHEAPWGSYPINTGVKFVHKDALEIEKIV 138 (213)
T ss_dssp HHCTTCSEEEEECTTEEECGGGTTSCGGGTCCCCCTTCCEEEECCTTTSSSSCCTTEEEEEGGGHHHHHHH
T ss_pred HHCCCceEEEEecCCceeecCCCCCcHHHccccccCceeeccccccccccccccceeeeecccchhhhhce
Confidence 33478999999999999992 23322222211111 11 11 246999999998765555544
No 16
>3ioh_A Histo-blood group ABO system transferase; GTA, cisab mutant, AA(Gly)B, rossman fold, unliganded, conformation, blood group antigen, glycoprotein; HET: GOL; 1.25A {Homo sapiens} SCOP: c.68.1.9 PDB: 3ioi_A* 3ioj_A* 3u0y_A* 3u0x_A* 1zhj_A* 2o1h_A* 2o1g_A* 3sx5_A* 3sx3_A* 2o1f_A 2rj6_A* 2rj5_A* 2rj7_A* 1zi4_A* 2y7a_A* 3sxb_A* 3sxa_A* 2riz_A 2rj0_A* 2rj1_A* ...
Probab=21.99 E-value=4.3e+02 Score=26.07 Aligned_cols=110 Identities=18% Similarity=0.279 Sum_probs=65.0
Q ss_pred chhh-hhhHhhhhhh-------ccCcCeEEEEcCCeecccCchh-----hhcC--CCeeeee-------cCC--------
Q 011823 120 RRFK-LTLNKLYAWN-------LVDYDRVVMLDSDNLFLEKTDE-----LFQC--GQFCAVF-------INP-------- 169 (476)
Q Consensus 120 ~r~~-~ty~KL~i~~-------L~eydRVLYLDaD~LVl~nLde-----LFd~--~~~~Aa~-------d~P-------- 169 (476)
.||. .+..|+.+.. +.|+|-+..+|+|+.+.+++.. |+.. +.+...+ .+|
T Consensus 123 ~~Wqd~sm~Rm~~i~~~~~~~~~~EvDyLfc~dvd~~F~~~vG~E~Lg~lva~lHp~~y~~~~~~FpYERrp~S~AyIp~ 202 (298)
T 3ioh_A 123 KRWQDVSMRRMEMISDFCERRFLSEVDYLVCVDVDMEFRDHVGVEILTPLFGTLHPGFYGSSREAFTYERRPQSQAYIPK 202 (298)
T ss_dssp SSHHHHHHHHHHHHHHHHHHTHHHHCSEEEEEESSEEECSCBCGGGCSSEEEEBCTTTTTSCGGGSCCCCCTTSTTCCCT
T ss_pred cCCccccHHHHHHHHHHHHHHHhhcCCEEEEecCCCeeccCccHHHhHhhHhhcChhhhcCCcccCcccCCccccccccC
Confidence 4553 5666666653 2579999999999999997542 2221 0000000 011
Q ss_pred ----CCccceEEEEeCC------HHHHHHHHHHHHhCCCCCCCCchhHHhcccCCCCCCCccCCCCCCCCCCCceeCCcc
Q 011823 170 ----CIFHTGLFVLQPS------ETVFKDMIHELETGRENPDGADQGFIASYFPDLLDKPMFHPSLNGTKLEGHYRLPLG 239 (476)
Q Consensus 170 ----~yFNSGVmvInps------~~~f~~lle~l~~~~~~~~~~DQDiLN~~f~d~~~~~lf~p~~~~~~ld~~~rLp~~ 239 (476)
-|+.+|++==.+. +...+.|++..+++ -.-..+|..=||.||-. .+ ..+-||..
T Consensus 203 ~eGdfYY~ga~fGGt~~~vl~Lt~~C~~~i~~D~~n~-IeA~WhDESHLNKYfl~--hK-------------PtKvLSPE 266 (298)
T 3ioh_A 203 DEGDFYYGGAFFGGSVQEVQRLTRACHQAMMVDQANG-IEAVWHDESHLNKYLLR--HK-------------PTKVLSPE 266 (298)
T ss_dssp TCCSCCBCTTEEEEEHHHHHHHHHHHHHHHHHHHHTT-CCCTTTHHHHHHHHHHH--SC-------------CSEEECGG
T ss_pred CCCCeEEeeeecCCcHHHHHHHHHHHHHHHHHHHhCC-ceEeccchhhhhhhhhh--cC-------------CCceeCHH
Confidence 3777777643332 33334444444332 22356899999999864 23 35789999
Q ss_pred ccccch
Q 011823 240 YQMDAS 245 (476)
Q Consensus 240 YN~~~~ 245 (476)
|+.+..
T Consensus 267 Y~Wd~~ 272 (298)
T 3ioh_A 267 YLWDQQ 272 (298)
T ss_dssp GSBCHH
T ss_pred HcCCcc
Confidence 998753
Done!