Query 011826
Match_columns 476
No_of_seqs 224 out of 1849
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 16:06:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011826.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011826hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2e31_A FBS1, F-box only protei 99.0 9E-11 3.1E-15 111.4 3.8 54 43-96 45-99 (297)
2 1fs1_A SKP2 F-BOX, cyclin A/CD 99.0 1E-10 3.4E-15 81.9 2.8 45 46-90 6-50 (53)
3 3ii7_A Kelch-like protein 7; p 98.9 4.3E-07 1.5E-11 87.4 24.5 197 192-415 70-280 (306)
4 1zgk_A Kelch-like ECH-associat 98.9 4.8E-07 1.7E-11 87.3 24.7 195 192-415 90-295 (308)
5 2xn4_A Kelch-like protein 2; s 98.9 4E-07 1.4E-11 87.4 23.8 196 192-414 77-283 (302)
6 2vpj_A Kelch-like protein 12; 98.9 9E-07 3.1E-11 84.9 25.8 194 192-414 78-285 (301)
7 4asc_A Kelch repeat and BTB do 98.8 1.2E-06 4.1E-11 84.7 25.7 193 193-413 68-283 (315)
8 2woz_A Kelch repeat and BTB do 98.8 9.9E-07 3.4E-11 85.4 24.9 192 194-413 80-293 (318)
9 3ii7_A Kelch-like protein 7; p 98.7 2.9E-06 1E-10 81.5 23.3 195 192-414 24-232 (306)
10 2vpj_A Kelch-like protein 12; 98.7 3.9E-06 1.4E-10 80.3 23.2 194 192-414 31-238 (301)
11 2uvk_A YJHT; unknown function, 98.6 3.3E-06 1.1E-10 83.1 21.0 234 178-432 17-319 (357)
12 2xn4_A Kelch-like protein 2; s 98.6 5.3E-06 1.8E-10 79.5 21.9 195 192-415 30-237 (302)
13 1zgk_A Kelch-like ECH-associat 98.6 4.8E-06 1.6E-10 80.2 21.7 194 192-414 39-247 (308)
14 2ovr_B FBW7, F-BOX/WD repeat p 98.6 6.8E-05 2.3E-09 75.6 31.1 50 46-95 16-65 (445)
15 3v7d_B Cell division control p 98.5 0.00032 1.1E-08 70.8 31.7 47 48-94 14-61 (464)
16 4asc_A Kelch repeat and BTB do 98.4 3.6E-05 1.2E-09 74.2 22.8 197 192-414 13-228 (315)
17 2uvk_A YJHT; unknown function, 98.4 2.5E-05 8.5E-10 76.7 20.9 199 192-414 86-349 (357)
18 1p22_A F-BOX/WD-repeat protein 98.3 9.8E-05 3.4E-09 74.3 24.0 47 48-94 10-60 (435)
19 2woz_A Kelch repeat and BTB do 98.2 4.5E-05 1.5E-09 73.6 18.1 152 192-369 127-293 (318)
20 2zwa_A Leucine carboxyl methyl 98.1 0.00023 7.8E-09 76.6 22.3 200 192-415 412-643 (695)
21 3l2o_B F-box only protein 4; s 97.8 4.2E-06 1.4E-10 78.6 0.9 50 47-96 3-52 (312)
22 1k3i_A Galactose oxidase precu 97.5 0.0016 5.4E-08 69.5 16.1 220 178-414 251-504 (656)
23 1k3i_A Galactose oxidase precu 97.4 0.013 4.4E-07 62.4 22.3 110 193-314 220-330 (656)
24 2ast_B S-phase kinase-associat 97.4 4.4E-05 1.5E-09 74.1 1.8 43 46-88 6-48 (336)
25 2zwa_A Leucine carboxyl methyl 97.3 0.0038 1.3E-07 67.1 16.6 154 192-367 468-639 (695)
26 2p1m_B Transport inhibitor res 96.8 0.00025 8.5E-09 74.4 1.0 38 45-82 2-40 (594)
27 2z2n_A Virginiamycin B lyase; 96.0 0.87 3E-05 41.8 20.4 192 175-410 104-298 (299)
28 3ogk_B Coronatine-insensitive 95.3 0.0035 1.2E-07 65.6 0.7 33 50-82 14-47 (592)
29 4gga_A P55CDC, cell division c 91.5 11 0.00037 36.7 23.1 198 178-412 114-315 (420)
30 1q7f_A NHL, brain tumor CG1071 87.4 16 0.00055 33.0 23.7 207 175-416 35-247 (286)
31 2qc5_A Streptogramin B lactona 87.3 16 0.00055 32.9 20.1 188 175-406 109-299 (300)
32 3dsm_A Uncharacterized protein 86.9 20 0.00069 33.5 23.5 197 180-412 2-217 (328)
33 3e5z_A Putative gluconolactona 86.4 19 0.00065 32.7 22.1 192 191-416 49-255 (296)
34 1q7f_A NHL, brain tumor CG1071 86.3 18 0.00063 32.5 23.3 192 178-407 86-280 (286)
35 1ri6_A Putative isomerase YBHE 86.2 20 0.00069 32.8 22.8 150 248-414 151-317 (343)
36 1l0q_A Surface layer protein; 86.1 23 0.00079 33.4 21.8 190 175-410 37-236 (391)
37 3jrp_A Fusion protein of prote 85.5 23 0.0008 32.9 20.9 188 191-409 32-242 (379)
38 3jro_A Fusion protein of prote 84.8 34 0.0012 36.3 18.1 187 191-408 30-239 (753)
39 3q7m_A Lipoprotein YFGL, BAMB; 84.4 28 0.00096 32.9 19.1 195 176-411 99-300 (376)
40 3u4y_A Uncharacterized protein 84.4 25 0.00085 32.3 21.0 192 180-410 9-210 (331)
41 4e54_B DNA damage-binding prot 82.6 20 0.0007 34.8 14.2 185 191-410 141-330 (435)
42 2z2n_A Virginiamycin B lyase; 82.5 27 0.00092 31.3 24.1 198 175-416 62-263 (299)
43 2ojh_A Uncharacterized protein 81.2 29 0.00098 30.7 18.9 186 191-413 21-212 (297)
44 3dsm_A Uncharacterized protein 80.7 37 0.0012 31.7 24.6 193 179-410 52-256 (328)
45 3dwl_C Actin-related protein 2 80.6 26 0.00088 32.9 13.8 187 191-410 32-239 (377)
46 3q7m_A Lipoprotein YFGL, BAMB; 80.4 40 0.0014 31.8 17.4 134 249-412 199-342 (376)
47 4aez_A CDC20, WD repeat-contai 79.4 44 0.0015 31.8 24.1 180 191-410 112-296 (401)
48 2ojh_A Uncharacterized protein 79.1 33 0.0011 30.2 21.0 201 177-414 49-265 (297)
49 3e5z_A Putative gluconolactona 78.7 38 0.0013 30.6 19.1 199 175-412 74-291 (296)
50 2hqs_A Protein TOLB; TOLB, PAL 77.3 54 0.0019 31.7 20.3 184 192-414 159-351 (415)
51 3nol_A Glutamine cyclotransfer 76.4 46 0.0016 30.4 14.7 112 278-415 50-164 (262)
52 3mbr_X Glutamine cyclotransfer 75.8 46 0.0016 30.1 16.9 115 275-415 24-142 (243)
53 2dg1_A DRP35, lactonase; beta 74.8 51 0.0018 30.2 22.4 209 178-415 53-271 (333)
54 3bws_A Protein LP49; two-domai 74.7 60 0.0021 30.9 23.5 197 177-412 177-395 (433)
55 4ggc_A P55CDC, cell division c 74.4 49 0.0017 29.7 22.7 67 178-259 34-100 (318)
56 2kwv_A RAD30 homolog B, DNA po 74.2 1.6 5.3E-05 28.1 1.7 24 43-66 15-38 (48)
57 3jrp_A Fusion protein of prote 73.5 57 0.0019 30.1 18.2 71 339-413 221-294 (379)
58 1rwi_B Serine/threonine-protei 73.0 49 0.0017 29.1 21.3 191 175-409 72-266 (270)
59 1ri6_A Putative isomerase YBHE 72.5 57 0.0019 29.6 21.7 103 299-414 152-271 (343)
60 3g4e_A Regucalcin; six bladed 71.3 61 0.0021 29.5 24.3 204 177-415 21-238 (297)
61 3ei3_B DNA damage-binding prot 70.2 71 0.0024 29.8 24.7 186 191-410 95-285 (383)
62 3hfq_A Uncharacterized protein 70.1 68 0.0023 29.5 17.7 116 280-413 50-178 (347)
63 1rwi_B Serine/threonine-protei 70.0 57 0.002 28.6 19.3 194 175-412 29-227 (270)
64 1l0q_A Surface layer protein; 69.4 74 0.0025 29.7 22.1 190 178-412 82-280 (391)
65 3hrp_A Uncharacterized protein 69.2 59 0.002 31.5 13.2 113 279-413 140-255 (409)
66 3sfz_A APAF-1, apoptotic pepti 67.9 1.6E+02 0.0054 32.9 20.9 197 175-412 621-833 (1249)
67 3dr2_A Exported gluconolactona 67.7 73 0.0025 29.0 18.5 201 183-416 59-276 (305)
68 1nir_A Nitrite reductase; hemo 67.6 1.1E+02 0.0037 30.9 18.9 197 191-411 247-462 (543)
69 3no2_A Uncharacterized protein 67.0 74 0.0025 28.8 16.6 185 191-414 14-203 (276)
70 3fvz_A Peptidyl-glycine alpha- 65.3 85 0.0029 28.9 18.2 130 175-316 96-237 (329)
71 3mbr_X Glutamine cyclotransfer 63.0 86 0.003 28.2 18.6 162 222-418 22-191 (243)
72 2qc5_A Streptogramin B lactona 61.9 86 0.0029 27.8 24.9 197 174-414 24-224 (300)
73 3vl1_A 26S proteasome regulato 59.7 1.2E+02 0.004 28.6 20.5 99 298-407 313-419 (420)
74 2hqs_A Protein TOLB; TOLB, PAL 57.5 1.4E+02 0.0047 28.7 23.4 183 192-414 203-394 (415)
75 3nok_A Glutaminyl cyclase; bet 57.2 1.2E+02 0.004 27.8 13.3 95 299-415 76-173 (268)
76 3p5b_L Low density lipoprotein 56.4 1.4E+02 0.0049 28.6 14.3 122 175-316 208-330 (400)
77 2iwa_A Glutamine cyclotransfer 55.7 1.2E+02 0.0041 27.6 16.5 109 281-415 32-144 (266)
78 3m0c_C LDL receptor, low-densi 54.9 2.2E+02 0.0076 30.4 27.3 114 275-414 474-596 (791)
79 3scy_A Hypothetical bacterial 54.3 1.3E+02 0.0046 27.6 22.1 105 298-413 233-345 (361)
80 3vgz_A Uncharacterized protein 54.2 1.3E+02 0.0044 27.4 22.7 185 191-411 68-266 (353)
81 4h5i_A Guanine nucleotide-exch 53.8 1.4E+02 0.0049 27.9 20.1 196 177-408 141-344 (365)
82 3sjl_D Methylamine dehydrogena 52.9 1.7E+02 0.0057 28.3 13.2 127 280-420 237-377 (386)
83 3vgz_A Uncharacterized protein 52.8 1.3E+02 0.0046 27.2 25.3 204 178-412 98-308 (353)
84 3v65_B Low-density lipoprotein 52.3 1.6E+02 0.0056 28.0 23.6 188 180-413 87-283 (386)
85 3o4h_A Acylamino-acid-releasin 52.1 1.9E+02 0.0066 28.9 13.9 187 180-413 122-320 (582)
86 3scy_A Hypothetical bacterial 51.2 1.5E+02 0.0051 27.3 20.7 201 194-414 31-249 (361)
87 2z3z_A Dipeptidyl aminopeptida 49.7 2.3E+02 0.0079 29.0 22.3 187 192-409 235-437 (706)
88 2fp8_A Strictosidine synthase; 49.7 1.5E+02 0.0052 27.0 13.9 120 280-413 29-180 (322)
89 1yr2_A Prolyl oligopeptidase; 49.5 2.5E+02 0.0085 29.3 24.9 166 224-413 271-447 (741)
90 2dg1_A DRP35, lactonase; beta 49.0 1.5E+02 0.0053 26.8 13.3 113 280-413 55-177 (333)
91 2aq5_A Coronin-1A; WD40 repeat 48.1 1.8E+02 0.0061 27.3 22.6 206 180-415 93-309 (402)
92 4a11_B DNA excision repair pro 47.7 1.7E+02 0.0059 27.0 14.8 29 381-409 249-278 (408)
93 3hfq_A Uncharacterized protein 46.5 1.7E+02 0.0059 26.6 25.9 170 223-415 143-327 (347)
94 3jro_A Fusion protein of prote 46.1 2.5E+02 0.0085 29.4 14.0 66 339-407 219-285 (753)
95 2fp8_A Strictosidine synthase; 45.9 1.7E+02 0.006 26.5 15.8 139 192-358 165-312 (322)
96 1evh_A WH1 domain, protein (ME 45.7 46 0.0016 26.0 6.0 42 193-242 12-53 (112)
97 1yfq_A Cell cycle arrest prote 45.6 1.7E+02 0.0058 26.3 21.7 185 191-410 78-285 (342)
98 1n7d_A LDL receptor, low-densi 45.6 1.2E+02 0.0042 31.8 11.3 28 279-313 463-490 (699)
99 4hw6_A Hypothetical protein, I 45.4 2.2E+02 0.0077 27.6 18.7 108 179-310 151-262 (433)
100 2bkl_A Prolyl endopeptidase; m 45.3 2.8E+02 0.0094 28.6 23.0 192 193-414 203-404 (695)
101 3mmy_A MRNA export factor; mRN 45.2 1.8E+02 0.006 26.4 20.7 190 191-410 107-307 (368)
102 3tc9_A Hypothetical hydrolase; 44.1 2.3E+02 0.0079 27.4 14.8 112 179-316 148-267 (430)
103 3v9f_A Two-component system se 43.9 3.1E+02 0.01 28.8 22.9 200 178-414 371-575 (781)
104 4a11_B DNA excision repair pro 43.2 2E+02 0.0069 26.5 17.0 57 191-259 121-177 (408)
105 1pjx_A Dfpase, DIISOPROPYLFLUO 43.1 1.8E+02 0.0061 25.9 22.1 197 191-414 45-264 (314)
106 3m0c_C LDL receptor, low-densi 42.8 3.4E+02 0.012 28.9 23.1 155 223-409 473-634 (791)
107 4e54_B DNA damage-binding prot 42.2 2.3E+02 0.008 26.9 17.7 30 383-412 406-435 (435)
108 3lrv_A PRE-mRNA-splicing facto 41.7 2.1E+02 0.0071 26.2 18.4 201 174-412 88-299 (343)
109 3hrp_A Uncharacterized protein 41.3 2.5E+02 0.0084 26.9 25.8 204 174-414 135-361 (409)
110 3azo_A Aminopeptidase; POP fam 40.7 3E+02 0.01 27.8 22.9 195 192-414 161-376 (662)
111 3i2n_A WD repeat-containing pr 39.7 2.1E+02 0.0073 25.7 21.8 188 191-408 138-354 (357)
112 1egx_A VAsp, vasodilator-stimu 39.0 53 0.0018 25.8 5.4 44 193-243 12-55 (115)
113 3u4y_A Uncharacterized protein 38.9 2.1E+02 0.0073 25.6 18.3 186 193-413 109-310 (331)
114 4a2l_A BT_4663, two-component 37.8 3.8E+02 0.013 28.1 25.1 201 178-410 318-529 (795)
115 3dr2_A Exported gluconolactona 37.3 2.3E+02 0.0078 25.4 12.4 106 192-318 169-278 (305)
116 2ovr_B FBW7, F-BOX/WD repeat p 37.2 2.8E+02 0.0095 26.3 22.8 137 248-408 299-443 (445)
117 3v64_C Agrin; beta propeller, 36.8 2.6E+02 0.0091 26.0 23.8 188 180-413 44-240 (349)
118 1gxr_A ESG1, transducin-like e 36.4 2.3E+02 0.0078 25.2 21.2 199 175-413 57-261 (337)
119 3no2_A Uncharacterized protein 35.9 2.4E+02 0.0082 25.2 15.6 143 248-415 15-163 (276)
120 3odt_A Protein DOA1; ubiquitin 35.9 2.3E+02 0.0077 24.9 25.1 190 179-411 28-218 (313)
121 1r5m_A SIR4-interacting protei 35.7 2.7E+02 0.0091 25.7 19.4 193 180-407 217-425 (425)
122 1k8k_C P40, ARP2/3 complex 41 35.6 2.5E+02 0.0086 25.4 18.4 138 248-406 30-172 (372)
123 1ijq_A LDL receptor, low-densi 35.3 2.6E+02 0.0089 25.5 25.5 180 192-414 10-202 (316)
124 2ad6_A Methanol dehydrogenase 34.9 3.5E+02 0.012 27.4 12.5 123 275-411 57-189 (571)
125 1k8k_C P40, ARP2/3 complex 41 34.9 2.6E+02 0.0089 25.3 23.4 197 178-410 17-236 (372)
126 2pm9_A Protein WEB1, protein t 33.4 2.9E+02 0.01 25.5 13.6 203 175-409 119-339 (416)
127 1kb0_A Quinohemoprotein alcoho 33.0 1.5E+02 0.0053 30.8 9.6 122 275-411 72-203 (677)
128 1yiq_A Quinohemoprotein alcoho 32.6 2E+02 0.007 29.9 10.5 122 275-411 65-196 (689)
129 1ddw_A GLGF-domain protein hom 32.2 86 0.0029 24.8 5.7 39 193-241 12-51 (120)
130 2ecf_A Dipeptidyl peptidase IV 31.4 4.4E+02 0.015 27.0 17.9 186 193-410 264-462 (741)
131 4aez_A CDC20, WD repeat-contai 31.3 3.3E+02 0.011 25.4 24.2 196 179-418 144-348 (401)
132 3g4e_A Regucalcin; six bladed 30.8 2.9E+02 0.0099 24.6 14.7 31 280-317 24-54 (297)
133 1kv9_A Type II quinohemoprotei 30.7 3.2E+02 0.011 28.2 11.6 121 275-411 61-191 (668)
134 2ghs_A AGR_C_1268P; regucalcin 29.7 3.2E+02 0.011 24.8 14.3 29 281-316 61-89 (326)
135 1ijq_A LDL receptor, low-densi 29.5 3.3E+02 0.011 24.8 13.7 114 175-309 126-240 (316)
136 2p4o_A Hypothetical protein; p 28.9 3.2E+02 0.011 24.5 14.7 115 280-417 42-157 (306)
137 2jp2_A Spred-2, sprouty-relate 28.5 93 0.0032 24.9 5.3 43 193-242 21-66 (126)
138 3vl1_A 26S proteasome regulato 27.9 3.7E+02 0.013 24.9 27.5 204 178-414 106-331 (420)
139 2ghs_A AGR_C_1268P; regucalcin 26.8 3.6E+02 0.012 24.5 23.2 202 177-415 57-268 (326)
140 1npe_A Nidogen, entactin; glyc 26.5 3.2E+02 0.011 23.8 24.6 195 177-414 44-246 (267)
141 3bws_A Protein LP49; two-domai 26.4 4E+02 0.014 24.8 21.4 176 191-407 233-432 (433)
142 2vdu_B TRNA (guanine-N(7)-)-me 26.2 4.3E+02 0.015 25.1 24.9 201 191-411 170-397 (450)
143 3v9f_A Two-component system se 26.1 5.8E+02 0.02 26.6 23.8 207 175-413 318-530 (781)
144 3v65_B Low-density lipoprotein 26.0 4.2E+02 0.014 25.0 16.0 109 280-413 127-240 (386)
145 3nol_A Glutamine cyclotransfer 24.5 3.9E+02 0.013 24.1 17.1 160 222-416 44-211 (262)
146 1xod_A Spred1; sprouty, EVH1, 23.9 86 0.0029 24.7 4.3 43 193-242 12-57 (118)
147 1i2h_A PSD-ZIP45(homer-1C/VESL 23.7 1.2E+02 0.0042 25.5 5.4 39 193-241 17-56 (168)
148 3lrv_A PRE-mRNA-splicing facto 23.4 4.1E+02 0.014 24.0 19.4 96 299-409 150-246 (343)
149 3sov_A LRP-6, low-density lipo 23.1 4.4E+02 0.015 24.1 13.7 22 280-308 46-67 (318)
150 2oiz_A Aromatic amine dehydrog 22.5 4.7E+02 0.016 24.2 16.2 71 338-415 265-342 (361)
151 1p22_A F-BOX/WD-repeat protein 22.4 4.9E+02 0.017 24.5 21.4 138 248-411 276-418 (435)
152 4g56_B MGC81050 protein; prote 22.1 4.6E+02 0.016 24.0 18.4 190 177-408 147-344 (357)
153 3dwl_C Actin-related protein 2 22.1 4.5E+02 0.015 23.9 17.0 68 338-409 216-283 (377)
154 3mkq_A Coatomer beta'-subunit; 21.9 6.6E+02 0.023 25.8 21.1 218 175-431 19-239 (814)
155 2z3z_A Dipeptidyl aminopeptida 21.6 6.4E+02 0.022 25.5 21.1 152 247-413 234-397 (706)
156 3fm0_A Protein CIAO1; WDR39,SG 21.6 4.6E+02 0.016 23.8 20.1 200 173-404 20-222 (345)
157 4gqb_B Methylosome protein 50; 21.5 4.7E+02 0.016 23.9 20.1 200 173-410 131-334 (344)
158 3sov_A LRP-6, low-density lipo 21.3 4.7E+02 0.016 23.9 18.2 157 222-413 36-203 (318)
159 1n7d_A LDL receptor, low-densi 20.9 4.3E+02 0.015 27.5 10.3 76 223-311 542-618 (699)
160 3v64_C Agrin; beta propeller, 20.6 5.1E+02 0.017 23.9 21.8 195 177-414 81-283 (349)
No 1
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=99.03 E-value=9e-11 Score=111.44 Aligned_cols=54 Identities=24% Similarity=0.495 Sum_probs=49.0
Q ss_pred hccCCCCCCCCHHHHHHHHhcCCccccc-eeeccchhhhhhhCChHHHHHHhhcC
Q 011826 43 AYHYSTIIDLPSHILIDILSRLPLKSIF-ISRCVCKTWHILISDPLFATLHFDRN 96 (476)
Q Consensus 43 ~~~~~~~~~LP~Dll~eIL~RLP~ksL~-R~r~VCK~W~~lissp~F~~~~~~~~ 96 (476)
+|++..+..||+||+.+||+|||+++|+ ||++|||+|++|++++.|.+.++.+.
T Consensus 45 ~~~~~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~~ 99 (297)
T 2e31_A 45 AEAVEYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQE 99 (297)
T ss_dssp --CCCCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHHT
T ss_pred cccccChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhcc
Confidence 3446688899999999999999999999 99999999999999999999998776
No 2
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=99.02 E-value=1e-10 Score=81.90 Aligned_cols=45 Identities=31% Similarity=0.423 Sum_probs=39.4
Q ss_pred CCCCCCCCHHHHHHHHhcCCccccceeeccchhhhhhhCChHHHH
Q 011826 46 YSTIIDLPSHILIDILSRLPLKSIFISRCVCKTWHILISDPLFAT 90 (476)
Q Consensus 46 ~~~~~~LP~Dll~eIL~RLP~ksL~R~r~VCK~W~~lissp~F~~ 90 (476)
...|..||+|++.+||++||+++++++++|||+|+.++.++.|.+
T Consensus 6 ~~~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW~ 50 (53)
T 1fs1_A 6 GVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQ 50 (53)
T ss_dssp ---CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC-
T ss_pred CCCHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 557889999999999999999999999999999999999988744
No 3
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.90 E-value=4.3e-07 Score=87.41 Aligned_cols=197 Identities=8% Similarity=-0.080 Sum_probs=123.9
Q ss_pred ccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcC-c--cccEEEEEEeCCCceEEccCCCC
Q 011826 192 NPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDD-F--LNRTAEIYSLGGAAWRKVGNAPW 268 (476)
Q Consensus 192 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~-~--~~~~~eVyss~t~~Wr~~~~~p~ 268 (476)
..+.++||.|++|..+|+++. . ...... ..+ +-+|+++...+ . ....+++|+..+++|+.++..|.
T Consensus 70 ~~~~~~d~~~~~W~~~~~~p~---~-r~~~~~--~~~-----~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~ 138 (306)
T 3ii7_A 70 KRMDCYNVVKDSWYSKLGPPT---P-RDSLAA--CAA-----EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLT 138 (306)
T ss_dssp CEEEEEETTTTEEEEEECCSS---C-CBSCEE--EEE-----TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSS
T ss_pred ceEEEEeCCCCeEEECCCCCc---c-ccceeE--EEE-----CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcC
Confidence 468999999999999988664 1 111111 122 12566664432 1 14579999999999999976552
Q ss_pred CCccCccceEEcceEEEEEeeccCCC--CCcceEEEEECCCceEEEEc-CCCCCCCCCCccCCcceeeEEeeCCeEEEEe
Q 011826 269 SPIAGLFPTYLNGVIHWVCDDIEDDQ--SCSDCIVGFDFEDERFCVIP-APPHFAEKPKTRDNLYDMNLGVLGGCLSICD 345 (476)
Q Consensus 269 ~~~~~~~~v~~~G~lywl~~~~~~~~--~~~~~Il~fD~~~e~f~~i~-lP~~~~~~~~~~~~~~~~~L~~~~G~L~~~~ 345 (476)
+......+.++|.+|.+........ .....+..||+.+++|+.++ +|... .....+.++|+|+++.
T Consensus 139 -~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r----------~~~~~~~~~~~i~v~G 207 (306)
T 3ii7_A 139 -QRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEAR----------KNHGLVFVKDKIFAVG 207 (306)
T ss_dssp -CCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCC----------BSCEEEEETTEEEEEC
T ss_pred -CcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchh----------hcceEEEECCEEEEEe
Confidence 2223366788999999875421111 00347999999999999995 34321 2344667799998885
Q ss_pred cCCC--CCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEEec------CCEEEEEeCCCCcEEEEEE
Q 011826 346 VTYF--APPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLFCK------RRALVLYNPVEKNTRYLLI 415 (476)
Q Consensus 346 ~~~~--~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~~~------~~~l~~ydl~t~~~~~v~i 415 (476)
.... ..-++|+.+-. ...|+..-.++..... ...+.-++.|++... ...+..||+++++++.+.-
T Consensus 208 G~~~~~~~~~~~~yd~~--~~~W~~~~~~p~~r~~---~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~ 280 (306)
T 3ii7_A 208 GQNGLGGLDNVEYYDIK--LNEWKMVSPMPWKGVT---VKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDKWVANSK 280 (306)
T ss_dssp CEETTEEBCCEEEEETT--TTEEEECCCCSCCBSC---CEEEEETTEEEEEECBCSSSBCCEEEEEETTTTEEEEEEE
T ss_pred CCCCCCCCceEEEeeCC--CCcEEECCCCCCCccc---eeEEEECCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCC
Confidence 4211 12467777643 3689986443332111 112223567766642 2578999999999998853
No 4
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=98.89 E-value=4.8e-07 Score=87.27 Aligned_cols=195 Identities=11% Similarity=0.041 Sum_probs=123.3
Q ss_pred ccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcC--ccccEEEEEEeCCCceEEccCCCCC
Q 011826 192 NPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDD--FLNRTAEIYSLGGAAWRKVGNAPWS 269 (476)
Q Consensus 192 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~--~~~~~~eVyss~t~~Wr~~~~~p~~ 269 (476)
..++++||.|++|..+|+++. .+. .... ..++ =+|+++.... .....+++|+..+++|+.+...|.
T Consensus 90 ~~~~~~d~~~~~W~~~~~~p~---~r~-~~~~--~~~~-----~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~- 157 (308)
T 1zgk_A 90 SALDCYNPMTNQWSPCAPMSV---PRN-RIGV--GVID-----GHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLT- 157 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSS---CCB-TCEE--EEET-----TEEEEECCEETTEECCCEEEEETTTTEEEECCCCSS-
T ss_pred ceEEEECCCCCeEeECCCCCc---Ccc-ccEE--EEEC-----CEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCc-
Confidence 468999999999999998664 111 1111 1121 1566663321 113579999999999999986552
Q ss_pred CccCccceEEcceEEEEEeeccCCCCCcceEEEEECCCceEEEEc-CCCCCCCCCCccCCcceeeEEeeCCeEEEEecCC
Q 011826 270 PIAGLFPTYLNGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIP-APPHFAEKPKTRDNLYDMNLGVLGGCLSICDVTY 348 (476)
Q Consensus 270 ~~~~~~~v~~~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~-lP~~~~~~~~~~~~~~~~~L~~~~G~L~~~~~~~ 348 (476)
+......+.++|.+|-+...... .....+..||+.+++|..++ +|... .....+..+|+|+++....
T Consensus 158 ~r~~~~~~~~~~~iyv~GG~~~~--~~~~~~~~yd~~~~~W~~~~~~p~~r----------~~~~~~~~~~~iyv~GG~~ 225 (308)
T 1zgk_A 158 RRIGVGVAVLNRLLYAVGGFDGT--NRLNSAECYYPERNEWRMITAMNTIR----------SGAGVCVLHNCIYAAGGYD 225 (308)
T ss_dssp CCBSCEEEEETTEEEEECCBCSS--CBCCCEEEEETTTTEEEECCCCSSCC----------BSCEEEEETTEEEEECCBC
T ss_pred cccceEEEEECCEEEEEeCCCCC--CcCceEEEEeCCCCeEeeCCCCCCcc----------ccceEEEECCEEEEEeCCC
Confidence 22223667789999998754211 11347999999999999884 33321 1334567799999886422
Q ss_pred C--CCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEEec------CCEEEEEeCCCCcEEEEEE
Q 011826 349 F--APPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLFCK------RRALVLYNPVEKNTRYLLI 415 (476)
Q Consensus 349 ~--~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~~~------~~~l~~ydl~t~~~~~v~i 415 (476)
. ..-++|+.+-. ...|++.-.++..... ...+..++.|++... ...+..||+++++++.+.-
T Consensus 226 ~~~~~~~v~~yd~~--~~~W~~~~~~p~~r~~---~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 295 (308)
T 1zgk_A 226 GQDQLNSVERYDVE--TETWTFVAPMKHRRSA---LGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTR 295 (308)
T ss_dssp SSSBCCCEEEEETT--TTEEEECCCCSSCCBS---CEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEE
T ss_pred CCCccceEEEEeCC--CCcEEECCCCCCCccc---eEEEEECCEEEEEcCcCCCcccceEEEEcCCCCEEeecCC
Confidence 2 23567777643 3689986544332221 112223567776632 3578999999999998853
No 5
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.89 E-value=4e-07 Score=87.44 Aligned_cols=196 Identities=11% Similarity=0.089 Sum_probs=123.4
Q ss_pred ccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCcc--ccEEEEEEeCCCceEEccCCCCC
Q 011826 192 NPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFL--NRTAEIYSLGGAAWRKVGNAPWS 269 (476)
Q Consensus 192 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~--~~~~eVyss~t~~Wr~~~~~p~~ 269 (476)
..+.++||.|++|..+|+++. .+. ....+ .++ =+|+.+...+.. ...+++|+..+++|+.+...|.
T Consensus 77 ~~~~~~d~~~~~W~~~~~~p~---~r~-~~~~~--~~~-----~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~- 144 (302)
T 2xn4_A 77 RTVDSYDPVKDQWTSVANMRD---RRS-TLGAA--VLN-----GLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNT- 144 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSS---CCB-SCEEE--EET-----TEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSS-
T ss_pred cceEEECCCCCceeeCCCCCc---ccc-ceEEE--EEC-----CEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCC-
Confidence 468999999999999998764 111 11111 121 156666443211 3579999999999999986553
Q ss_pred CccCccceEEcceEEEEEeeccCCCCCcceEEEEECCCceEEEEc-CCCCCCCCCCccCCcceeeEEeeCCeEEEEecCC
Q 011826 270 PIAGLFPTYLNGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIP-APPHFAEKPKTRDNLYDMNLGVLGGCLSICDVTY 348 (476)
Q Consensus 270 ~~~~~~~v~~~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~-lP~~~~~~~~~~~~~~~~~L~~~~G~L~~~~~~~ 348 (476)
+......+.++|.+|-+.............+..||+.+++|+.++ +|... ....++..+|+|+++....
T Consensus 145 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r----------~~~~~~~~~~~iyv~GG~~ 214 (302)
T 2xn4_A 145 RRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRR----------SGAGVGVLNNLLYAVGGHD 214 (302)
T ss_dssp CCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCC----------BSCEEEEETTEEEEECCBS
T ss_pred cccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCcccc----------ccccEEEECCEEEEECCCC
Confidence 222236677899999986541111111347999999999999984 34321 1345677899999886522
Q ss_pred CC--CeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEEec------CCEEEEEeCCCCcEEEEE
Q 011826 349 FA--PPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLFCK------RRALVLYNPVEKNTRYLL 414 (476)
Q Consensus 349 ~~--~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~~~------~~~l~~ydl~t~~~~~v~ 414 (476)
.. .-++|+.+-. ...|+..-.++..+... ..+..++.|++... ...+..||+++++++.+.
T Consensus 215 ~~~~~~~~~~yd~~--~~~W~~~~~~~~~r~~~---~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 283 (302)
T 2xn4_A 215 GPLVRKSVEVYDPT--TNAWRQVADMNMCRRNA---GVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVS 283 (302)
T ss_dssp SSSBCCCEEEEETT--TTEEEEECCCSSCCBSC---EEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECS
T ss_pred CCcccceEEEEeCC--CCCEeeCCCCCCccccC---eEEEECCEEEEECCcCCCcccccEEEEcCCCCeEEECC
Confidence 21 2467777643 36899875443322211 12233567776632 245899999999998874
No 6
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.88 E-value=9e-07 Score=84.86 Aligned_cols=194 Identities=10% Similarity=0.047 Sum_probs=123.1
Q ss_pred ccEEEEcccccc---eeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCcc--ccEEEEEEeCCCceEEccCC
Q 011826 192 NPCIICNPITGE---YVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFL--NRTAEIYSLGGAAWRKVGNA 266 (476)
Q Consensus 192 ~~~~V~NP~T~~---~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~--~~~~eVyss~t~~Wr~~~~~ 266 (476)
..++++||.|++ |..+|+++. ... ... +..++ -+|+++...... ...+++|+..+++|+.+...
T Consensus 78 ~~~~~~d~~~~~~~~W~~~~~~p~---~r~-~~~--~~~~~-----~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~ 146 (301)
T 2vpj_A 78 SSVECLDYTADEDGVWYSVAPMNV---RRG-LAG--ATTLG-----DMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDM 146 (301)
T ss_dssp CCEEEEETTCCTTCCCEEECCCSS---CCB-SCE--EEEET-----TEEEEECCBCSSCBCCEEEEEETTTTEEEEEEEC
T ss_pred ceEEEEECCCCCCCeeEECCCCCC---Ccc-cee--EEEEC-----CEEEEEcccCCCcccceEEEEcCCCCeEEECCCC
Confidence 469999999999 999988664 111 111 11121 256666442211 45799999999999999765
Q ss_pred CCCCccCccceEEcceEEEEEeeccCCCCCcceEEEEECCCceEEEEc-CCCCCCCCCCccCCcceeeEEeeCCeEEEEe
Q 011826 267 PWSPIAGLFPTYLNGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIP-APPHFAEKPKTRDNLYDMNLGVLGGCLSICD 345 (476)
Q Consensus 267 p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~-lP~~~~~~~~~~~~~~~~~L~~~~G~L~~~~ 345 (476)
|. +......+.++|.+|.+.... +......+..||+.+++|+.++ +|... .....+..+|+|+++.
T Consensus 147 p~-~r~~~~~~~~~~~iyv~GG~~--~~~~~~~~~~~d~~~~~W~~~~~~p~~r----------~~~~~~~~~~~i~v~G 213 (301)
T 2vpj_A 147 QT-AREGAGLVVASGVIYCLGGYD--GLNILNSVEKYDPHTGHWTNVTPMATKR----------SGAGVALLNDHIYVVG 213 (301)
T ss_dssp SS-CCBSCEEEEETTEEEEECCBC--SSCBCCCEEEEETTTTEEEEECCCSSCC----------BSCEEEEETTEEEEEC
T ss_pred CC-CcccceEEEECCEEEEECCCC--CCcccceEEEEeCCCCcEEeCCCCCccc----------ccceEEEECCEEEEEe
Confidence 52 222236677899999886531 1122347999999999999984 33322 1344667789999886
Q ss_pred cCCCC--CeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEEecC------CEEEEEeCCCCcEEEEE
Q 011826 346 VTYFA--PPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLFCKR------RALVLYNPVEKNTRYLL 414 (476)
Q Consensus 346 ~~~~~--~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~~~~------~~l~~ydl~t~~~~~v~ 414 (476)
..... .-++|+.+-. ...|+..-.++...... ..+..++.|++.... ..+..||+++++++.+.
T Consensus 214 G~~~~~~~~~v~~yd~~--~~~W~~~~~~p~~r~~~---~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 285 (301)
T 2vpj_A 214 GFDGTAHLSSVEAYNIR--TDSWTTVTSMTTPRCYV---GATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVT 285 (301)
T ss_dssp CBCSSSBCCCEEEEETT--TTEEEEECCCSSCCBSC---EEEEETTEEEEECCBCSSSBEEEEEEEETTTTEEEEEE
T ss_pred CCCCCcccceEEEEeCC--CCcEEECCCCCCcccce---eEEEECCEEEEEcCcCCCcccccEEEEcCCCCeEEEcC
Confidence 52221 3467777643 36899875443322211 122335677666321 46899999999999875
No 7
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=98.85 E-value=1.2e-06 Score=84.71 Aligned_cols=193 Identities=10% Similarity=0.026 Sum_probs=122.3
Q ss_pred cEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEc-----CccccEEEEEEeCCCceEEccCCC
Q 011826 193 PCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFD-----DFLNRTAEIYSLGGAAWRKVGNAP 267 (476)
Q Consensus 193 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~-----~~~~~~~eVyss~t~~Wr~~~~~p 267 (476)
.++++||.|++|..+|+++. . ...... ..+ +=+|+++.+. ......+++|+..+++|+.+...|
T Consensus 68 ~~~~~d~~~~~W~~~~~~p~---~-r~~~~~--~~~-----~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p 136 (315)
T 4asc_A 68 YFLQFDHLDSEWLGMPPLPS---P-RCLFGL--GEA-----LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLP 136 (315)
T ss_dssp EEEEEETTTTEEEECCCBSS---C-EESCEE--EEE-----TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCS
T ss_pred ceEEecCCCCeEEECCCCCc---c-hhceeE--EEE-----CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCC
Confidence 38899999999999998664 1 111111 111 1256666442 112467999999999999998655
Q ss_pred CCCccCccceEEcceEEEEEeeccCCCCCcceEEEEECCCceEEEEc-CCCCCCCCCCccCCcceeeEEeeCCeEEEEec
Q 011826 268 WSPIAGLFPTYLNGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIP-APPHFAEKPKTRDNLYDMNLGVLGGCLSICDV 346 (476)
Q Consensus 268 ~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~-lP~~~~~~~~~~~~~~~~~L~~~~G~L~~~~~ 346 (476)
. +......+.++|.+|.+..... +......+..||+.+++|+.++ +|... .....+..+|+|+++..
T Consensus 137 ~-~r~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~~yd~~~~~W~~~~~~p~~r----------~~~~~~~~~~~iyv~GG 204 (315)
T 4asc_A 137 Y-VVYGHTVLSHMDLVYVIGGKGS-DRKCLNKMCVYDPKKFEWKELAPMQTAR----------SLFGATVHDGRIIVAAG 204 (315)
T ss_dssp S-CCBSCEEEEETTEEEEECCBCT-TSCBCCCEEEEETTTTEEEECCCCSSCC----------BSCEEEEETTEEEEEEE
T ss_pred C-cccceeEEEECCEEEEEeCCCC-CCcccceEEEEeCCCCeEEECCCCCCch----------hceEEEEECCEEEEEec
Confidence 3 2223367789999998875411 1223347999999999999984 44322 23446678999998865
Q ss_pred CCCC--CeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEEec---------------CCEEEEEeCCCCc
Q 011826 347 TYFA--PPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLFCK---------------RRALVLYNPVEKN 409 (476)
Q Consensus 347 ~~~~--~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~~~---------------~~~l~~ydl~t~~ 409 (476)
.... .-++|+.+-. ...|+..-.++..+... ..+.-++.|++... ...+..||+++++
T Consensus 205 ~~~~~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~---~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 279 (315)
T 4asc_A 205 VTDTGLTSSAEVYSIT--DNKWAPFEAFPQERSSL---SLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKK 279 (315)
T ss_dssp ECSSSEEEEEEEEETT--TTEEEEECCCSSCCBSC---EEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTE
T ss_pred cCCCCccceEEEEECC--CCeEEECCCCCCcccce---eEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCCh
Confidence 3222 2478887643 36899875433322211 12223556666531 1357899999999
Q ss_pred EEEE
Q 011826 410 TRYL 413 (476)
Q Consensus 410 ~~~v 413 (476)
++.+
T Consensus 280 W~~~ 283 (315)
T 4asc_A 280 WEGV 283 (315)
T ss_dssp EEEE
T ss_pred hhhh
Confidence 9988
No 8
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=98.84 E-value=9.9e-07 Score=85.43 Aligned_cols=192 Identities=14% Similarity=0.122 Sum_probs=121.1
Q ss_pred EEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcC----ccccEEEEEEeCCCceEEccCCCCC
Q 011826 194 CIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDD----FLNRTAEIYSLGGAAWRKVGNAPWS 269 (476)
Q Consensus 194 ~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~----~~~~~~eVyss~t~~Wr~~~~~p~~ 269 (476)
++++||.|++|..+|+.+. .+. .... ..+ +=+|+++.... .....+++|+..+++|+.+...|.
T Consensus 80 ~~~~d~~~~~W~~~~~~p~---~r~-~~~~--~~~-----~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~- 147 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLPS---ARC-LFGL--GEV-----DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPI- 147 (318)
T ss_dssp EEEEETTTTEEEECSCBSS---CBC-SCEE--EEE-----TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSS-
T ss_pred EEEEeCCCCcEEECCCCCc---ccc-ccce--EEE-----CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCC-
Confidence 8899999999999998664 111 1111 111 12566665432 114579999999999999986552
Q ss_pred CccCccceEEcceEEEEEeeccCCCCCcceEEEEECCCceEEEEc-CCCCCCCCCCccCCcceeeEEeeCCeEEEEecCC
Q 011826 270 PIAGLFPTYLNGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIP-APPHFAEKPKTRDNLYDMNLGVLGGCLSICDVTY 348 (476)
Q Consensus 270 ~~~~~~~v~~~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~-lP~~~~~~~~~~~~~~~~~L~~~~G~L~~~~~~~ 348 (476)
+......+.++|.+|.+..... +......+..||+.+++|+.++ +|... .....+..+|+|+++....
T Consensus 148 ~r~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~~yd~~~~~W~~~~~~p~~r----------~~~~~~~~~~~iyv~GG~~ 216 (318)
T 2woz_A 148 KVYGHNVISHNGMIYCLGGKTD-DKKCTNRVFIYNPKKGDWKDLAPMKTPR----------SMFGVAIHKGKIVIAGGVT 216 (318)
T ss_dssp CEESCEEEEETTEEEEECCEES-SSCBCCCEEEEETTTTEEEEECCCSSCC----------BSCEEEEETTEEEEEEEEE
T ss_pred cccccEEEEECCEEEEEcCCCC-CCCccceEEEEcCCCCEEEECCCCCCCc----------ccceEEEECCEEEEEcCcC
Confidence 2223366779999999875311 1122347999999999999985 33321 1334567899999886422
Q ss_pred CC--CeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEEec---------------CCEEEEEeCCCCcEE
Q 011826 349 FA--PPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLFCK---------------RRALVLYNPVEKNTR 411 (476)
Q Consensus 349 ~~--~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~~~---------------~~~l~~ydl~t~~~~ 411 (476)
.. .-++|+.+-. ...|++.-.++...... ..+..++.|++... ...+..||+++++++
T Consensus 217 ~~~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~---~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~ 291 (318)
T 2woz_A 217 EDGLSASVEAFDLK--TNKWEVMTEFPQERSSI---SLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWA 291 (318)
T ss_dssp TTEEEEEEEEEETT--TCCEEECCCCSSCCBSC---EEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEE
T ss_pred CCCccceEEEEECC--CCeEEECCCCCCcccce---EEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEeh
Confidence 22 2467777643 36899865443322211 12233456666521 246899999999999
Q ss_pred EE
Q 011826 412 YL 413 (476)
Q Consensus 412 ~v 413 (476)
++
T Consensus 292 ~~ 293 (318)
T 2woz_A 292 GM 293 (318)
T ss_dssp EE
T ss_pred hh
Confidence 98
No 9
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.71 E-value=2.9e-06 Score=81.47 Aligned_cols=195 Identities=13% Similarity=0.110 Sum_probs=123.1
Q ss_pred ccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcC-ccccEEEEEEeCCCceEEccCCCCCC
Q 011826 192 NPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDD-FLNRTAEIYSLGGAAWRKVGNAPWSP 270 (476)
Q Consensus 192 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~-~~~~~~eVyss~t~~Wr~~~~~p~~~ 270 (476)
..+.++||.+++|..+++++. ... ....+ .++ + +|+++.... .....+++|+..+++|+.+...|. +
T Consensus 24 ~~~~~~d~~~~~W~~~~~~p~---~r~-~~~~~--~~~----~-~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~-~ 91 (306)
T 3ii7_A 24 QSCRYFNPKDYSWTDIRCPFE---KRR-DAACV--FWD----N-VVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPT-P 91 (306)
T ss_dssp TSEEEEETTTTEEEECCCCSC---CCB-SCEEE--EET----T-EEEEECCBSSSBCCEEEEEETTTTEEEEEECCSS-C
T ss_pred ceEEEecCCCCCEecCCCCCc---ccc-eeEEE--EEC----C-EEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCc-c
Confidence 469999999999999998664 111 11111 121 1 466654432 124679999999999999976552 2
Q ss_pred ccCccceEEcceEEEEEeeccCCCCCcceEEEEECCCceEEEEc-CCCCCCCCCCccCCcceeeEEeeCCeEEEEecC--
Q 011826 271 IAGLFPTYLNGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIP-APPHFAEKPKTRDNLYDMNLGVLGGCLSICDVT-- 347 (476)
Q Consensus 271 ~~~~~~v~~~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~-lP~~~~~~~~~~~~~~~~~L~~~~G~L~~~~~~-- 347 (476)
......+.++|.+|.+..... +......+..||+.+.+|..++ +|... .....+..+|+|+++...
T Consensus 92 r~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~~~d~~~~~W~~~~~~p~~r----------~~~~~~~~~~~iyv~GG~~~ 160 (306)
T 3ii7_A 92 RDSLAACAAEGKIYTSGGSEV-GNSALYLFECYDTRTESWHTKPSMLTQR----------CSHGMVEANGLIYVCGGSLG 160 (306)
T ss_dssp CBSCEEEEETTEEEEECCBBT-TBSCCCCEEEEETTTTEEEEECCCSSCC----------BSCEEEEETTEEEEECCEES
T ss_pred ccceeEEEECCEEEEECCCCC-CCcEeeeEEEEeCCCCceEeCCCCcCCc----------ceeEEEEECCEEEEECCCCC
Confidence 223366788999998875421 1223347999999999999984 44322 133456789999987542
Q ss_pred CCC----CeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEEec------CCEEEEEeCCCCcEEEEE
Q 011826 348 YFA----PPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLFCK------RRALVLYNPVEKNTRYLL 414 (476)
Q Consensus 348 ~~~----~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~~~------~~~l~~ydl~t~~~~~v~ 414 (476)
... .-++|+.+-. ...|++.-.++.... ....+..++.|++... ...+..||+++++++.+.
T Consensus 161 ~~~~~~~~~~~~~yd~~--~~~W~~~~~~p~~r~---~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~ 232 (306)
T 3ii7_A 161 NNVSGRVLNSCEVYDPA--TETWTELCPMIEARK---NHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVS 232 (306)
T ss_dssp CTTTCEECCCEEEEETT--TTEEEEECCCSSCCB---SCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECC
T ss_pred CCCcccccceEEEeCCC--CCeEEECCCccchhh---cceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECC
Confidence 111 4567777643 368998754333221 1122233567766521 246899999999998874
No 10
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.68 E-value=3.9e-06 Score=80.30 Aligned_cols=194 Identities=11% Similarity=0.009 Sum_probs=122.6
Q ss_pred ccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCc--cccEEEEEEeCCCc---eEEccCC
Q 011826 192 NPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDF--LNRTAEIYSLGGAA---WRKVGNA 266 (476)
Q Consensus 192 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~--~~~~~eVyss~t~~---Wr~~~~~ 266 (476)
..++++||.|++|..+|+++. ... ... +...+ =+|+.+..... ....+++|+..+++ |+.+...
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~---~r~-~~~--~~~~~-----~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~ 99 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITR---KRR-YVA--SVSLH-----DRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPM 99 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSS---CCB-SCE--EEEET-----TEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCC
T ss_pred eEEEEEcCCCCeEEeCCCCCh---hhc-ccc--EEEEC-----CEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCC
Confidence 468999999999999997654 111 111 11121 15666644221 14579999999999 9999765
Q ss_pred CCCCccCccceEEcceEEEEEeeccCCCCCcceEEEEECCCceEEEEc-CCCCCCCCCCccCCcceeeEEeeCCeEEEEe
Q 011826 267 PWSPIAGLFPTYLNGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIP-APPHFAEKPKTRDNLYDMNLGVLGGCLSICD 345 (476)
Q Consensus 267 p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~-lP~~~~~~~~~~~~~~~~~L~~~~G~L~~~~ 345 (476)
|. +......+.++|.+|.+.... +......+..||+.+.+|..++ +|... .....+..+|+|+++.
T Consensus 100 p~-~r~~~~~~~~~~~lyv~GG~~--~~~~~~~~~~~d~~~~~W~~~~~~p~~r----------~~~~~~~~~~~iyv~G 166 (301)
T 2vpj_A 100 NV-RRGLAGATTLGDMIYVSGGFD--GSRRHTSMERYDPNIDQWSMLGDMQTAR----------EGAGLVVASGVIYCLG 166 (301)
T ss_dssp SS-CCBSCEEEEETTEEEEECCBC--SSCBCCEEEEEETTTTEEEEEEECSSCC----------BSCEEEEETTEEEEEC
T ss_pred CC-CccceeEEEECCEEEEEcccC--CCcccceEEEEcCCCCeEEECCCCCCCc----------ccceEEEECCEEEEEC
Confidence 52 222336677899999987542 1122347999999999999984 44322 1334566789999885
Q ss_pred cCCC--CCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEEec------CCEEEEEeCCCCcEEEEE
Q 011826 346 VTYF--APPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLFCK------RRALVLYNPVEKNTRYLL 414 (476)
Q Consensus 346 ~~~~--~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~~~------~~~l~~ydl~t~~~~~v~ 414 (476)
.... ..-++|+.+-. ...|++.-.++..... ...+..++.|++... ...+..||+++++++.+.
T Consensus 167 G~~~~~~~~~~~~~d~~--~~~W~~~~~~p~~r~~---~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 238 (301)
T 2vpj_A 167 GYDGLNILNSVEKYDPH--TGHWTNVTPMATKRSG---AGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVT 238 (301)
T ss_dssp CBCSSCBCCCEEEEETT--TTEEEEECCCSSCCBS---CEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred CCCCCcccceEEEEeCC--CCcEEeCCCCCccccc---ceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECC
Confidence 4222 23567777643 3689987433332211 122233567766632 356999999999999885
No 11
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.62 E-value=3.3e-06 Score=83.05 Aligned_cols=234 Identities=8% Similarity=-0.038 Sum_probs=130.5
Q ss_pred cccceEEEeecCCCccEEEEcccc--cceeecCCCC-CCCCcCccceeEEEEeEeCCCCCeEEEEEEEc----C---ccc
Q 011826 178 SCNGFLCLRKPFHRNPCIICNPIT--GEYVTIPKPA-AEDDKKTLRTVISGFGYSFRSKQYKVLRLVFD----D---FLN 247 (476)
Q Consensus 178 s~~GLlcl~~~~~~~~~~V~NP~T--~~~~~LP~~~-~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~----~---~~~ 247 (476)
..+|-|.+..+.....++++||.+ .+|..+|+.+ . .+. ....+ .++ =+|+++... . ...
T Consensus 17 ~~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~---~R~-~~~~~--~~~-----~~lyv~GG~~~~~~~~~~~~ 85 (357)
T 2uvk_A 17 IDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGG---PRD-QATSA--FID-----GNLYVFGGIGKNSEGLTQVF 85 (357)
T ss_dssp EETTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTC---CCB-SCEEE--EET-----TEEEEECCEEECTTSCEEEC
T ss_pred EECCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCC---cCc-cceEE--EEC-----CEEEEEcCCCCCCCccceee
Confidence 336766555433345799999984 8999999866 2 111 11111 121 146665332 1 014
Q ss_pred cEEEEEEeCCCceEEccCCCCCCccCccceEEcceEEEEEeeccCC--------------------------------CC
Q 011826 248 RTAEIYSLGGAAWRKVGNAPWSPIAGLFPTYLNGVIHWVCDDIEDD--------------------------------QS 295 (476)
Q Consensus 248 ~~~eVyss~t~~Wr~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~--------------------------------~~ 295 (476)
..+++|+..+++|+.+...+..+.....++.++|.+|.+....... ..
T Consensus 86 ~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (357)
T 2uvk_A 86 NDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYF 165 (357)
T ss_dssp CCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGC
T ss_pred ccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccC
Confidence 5799999999999999865412222225567999999987531000 01
Q ss_pred CcceEEEEECCCceEEEE-cCCCCCCCCCCccCCcceeeEEeeCCeEEEEecCC---CCCeEEEeeccCCCCcceEEEEE
Q 011826 296 CSDCIVGFDFEDERFCVI-PAPPHFAEKPKTRDNLYDMNLGVLGGCLSICDVTY---FAPPDIWVMKDYGVQESWIKQLS 371 (476)
Q Consensus 296 ~~~~Il~fD~~~e~f~~i-~lP~~~~~~~~~~~~~~~~~L~~~~G~L~~~~~~~---~~~l~IWvl~~~~~~~~W~~~~~ 371 (476)
....+..||+.+++|+.+ ++|..... ...++..+|+|+++.... ...-++|+++-......|+++-.
T Consensus 166 ~~~~v~~yd~~~~~W~~~~~~p~~~~~---------~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~ 236 (357)
T 2uvk_A 166 FNKFLLSFDPSTQQWSYAGESPWYGTA---------GAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAP 236 (357)
T ss_dssp CCCEEEEEETTTTEEEEEEECSSCCCB---------SCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCC
T ss_pred CcccEEEEeCCCCcEEECCCCCCCCcc---------cccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCC
Confidence 124899999999999998 44532221 245677889998875421 12356777752111468998654
Q ss_pred EeCCCcceeeEEEEecCCcEEEEecC-----------------------CEEEEEeCCCCcEEEEEEeeCCCCeEEEEEe
Q 011826 372 VDNGYFGICRPIKYLDDGSLLLFCKR-----------------------RALVLYNPVEKNTRYLLIHEDQSMIFEAITH 428 (476)
Q Consensus 372 I~~~~~~~~~p~~~~~~g~il~~~~~-----------------------~~l~~ydl~t~~~~~v~i~g~~~~~~~~~~Y 428 (476)
++.... ......+..++.|++.... ..+..||+++++++.+.-.......+.++.+
T Consensus 237 ~~~~~~-~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 315 (357)
T 2uvk_A 237 VSSPDG-VAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPW 315 (357)
T ss_dssp SSTTTC-CBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEEE
T ss_pred CCCCcc-cccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEEe
Confidence 432211 1111223345677665320 2578999999999998643333323334433
Q ss_pred cCCc
Q 011826 429 VPSF 432 (476)
Q Consensus 429 ~~Sl 432 (476)
-..+
T Consensus 316 ~~~i 319 (357)
T 2uvk_A 316 NNSL 319 (357)
T ss_dssp TTEE
T ss_pred CCEE
Confidence 3333
No 12
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.61 E-value=5.3e-06 Score=79.47 Aligned_cols=195 Identities=13% Similarity=0.109 Sum_probs=122.2
Q ss_pred ccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCc--cccEEEEEEeCCCceEEccCCCCC
Q 011826 192 NPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDF--LNRTAEIYSLGGAAWRKVGNAPWS 269 (476)
Q Consensus 192 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~--~~~~~eVyss~t~~Wr~~~~~p~~ 269 (476)
..+.++||.+++|..+++.+. ... ....+ .+ +-+|+++.+... ....+++|+..+++|+.+...|.
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~---~r~-~~~~~--~~-----~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~- 97 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPS---RRC-RAGMV--YM-----AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRD- 97 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSS---CCB-SCEEE--EE-----TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSS-
T ss_pred CcEEEEcCcCCcEeEcccCCc---ccc-cceEE--EE-----CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCc-
Confidence 458999999999999987654 111 11111 11 124555533221 14578999999999999986553
Q ss_pred CccCccceEEcceEEEEEeeccCCCCCcceEEEEECCCceEEEEc-CCCCCCCCCCccCCcceeeEEeeCCeEEEEecCC
Q 011826 270 PIAGLFPTYLNGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIP-APPHFAEKPKTRDNLYDMNLGVLGGCLSICDVTY 348 (476)
Q Consensus 270 ~~~~~~~v~~~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~-lP~~~~~~~~~~~~~~~~~L~~~~G~L~~~~~~~ 348 (476)
+......+.++|.+|-+.... +......+..||+.+.+|..++ +|... .....+..+|+|+++....
T Consensus 98 ~r~~~~~~~~~~~iyv~GG~~--~~~~~~~~~~~d~~~~~W~~~~~~p~~r----------~~~~~~~~~~~iyv~GG~~ 165 (302)
T 2xn4_A 98 RRSTLGAAVLNGLLYAVGGFD--GSTGLSSVEAYNIKSNEWFHVAPMNTRR----------SSVGVGVVGGLLYAVGGYD 165 (302)
T ss_dssp CCBSCEEEEETTEEEEEEEEC--SSCEEEEEEEEETTTTEEEEECCCSSCC----------BSCEEEEETTEEEEECCEE
T ss_pred cccceEEEEECCEEEEEcCCC--CCccCceEEEEeCCCCeEeecCCCCCcc----------cCceEEEECCEEEEEeCCC
Confidence 222236677899999987542 1122246899999999999984 33221 1334667899999875421
Q ss_pred CC----CeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEEec------CCEEEEEeCCCCcEEEEEE
Q 011826 349 FA----PPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLFCK------RRALVLYNPVEKNTRYLLI 415 (476)
Q Consensus 349 ~~----~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~~~------~~~l~~ydl~t~~~~~v~i 415 (476)
.. .-++|+.+-. ...|++.-.++..... ...+..++.|++... ...+..||+++++++.+..
T Consensus 166 ~~~~~~~~~~~~yd~~--~~~W~~~~~~p~~r~~---~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~ 237 (302)
T 2xn4_A 166 VASRQCLSTVECYNAT--TNEWTYIAEMSTRRSG---AGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVAD 237 (302)
T ss_dssp TTTTEECCCEEEEETT--TTEEEEECCCSSCCBS---CEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECC
T ss_pred CCCCccccEEEEEeCC--CCcEEECCCCcccccc---ccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCC
Confidence 11 2457777643 3689987444332221 122233567766632 2469999999999998863
No 13
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=98.61 E-value=4.8e-06 Score=80.21 Aligned_cols=194 Identities=9% Similarity=0.017 Sum_probs=120.8
Q ss_pred ccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEc----Cc--cccEEEEEEeCCCceEEccC
Q 011826 192 NPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFD----DF--LNRTAEIYSLGGAAWRKVGN 265 (476)
Q Consensus 192 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~----~~--~~~~~eVyss~t~~Wr~~~~ 265 (476)
..+.++||.|++|..+++.+. .+. ....+ .. +=+|+.+... +. ....+++|+..+++|+.+..
T Consensus 39 ~~~~~~d~~~~~W~~~~~~p~---~r~-~~~~~--~~-----~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 107 (308)
T 1zgk_A 39 SYLEAYNPSNGTWLRLADLQV---PRS-GLAGC--VV-----GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAP 107 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSS---CCB-SCEEE--EE-----TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCC
T ss_pred ceEEEEcCCCCeEeECCCCCc---ccc-cceEE--EE-----CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCC
Confidence 469999999999999987664 111 11111 11 1145555332 11 13568999999999999986
Q ss_pred CCCCCccCccceEEcceEEEEEeeccCCCCCcceEEEEECCCceEEEEc-CCCCCCCCCCccCCcceeeEEeeCCeEEEE
Q 011826 266 APWSPIAGLFPTYLNGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIP-APPHFAEKPKTRDNLYDMNLGVLGGCLSIC 344 (476)
Q Consensus 266 ~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~-lP~~~~~~~~~~~~~~~~~L~~~~G~L~~~ 344 (476)
.|. +......+.++|.+|.+..... ......+..||+.+++|..++ +|.... ....+..+|+|+++
T Consensus 108 ~p~-~r~~~~~~~~~~~iyv~GG~~~--~~~~~~~~~yd~~~~~W~~~~~~p~~r~----------~~~~~~~~~~iyv~ 174 (308)
T 1zgk_A 108 MSV-PRNRIGVGVIDGHIYAVGGSHG--CIHHNSVERYEPERDEWHLVAPMLTRRI----------GVGVAVLNRLLYAV 174 (308)
T ss_dssp CSS-CCBTCEEEEETTEEEEECCEET--TEECCCEEEEETTTTEEEECCCCSSCCB----------SCEEEEETTEEEEE
T ss_pred CCc-CccccEEEEECCEEEEEcCCCC--CcccccEEEECCCCCeEeECCCCCcccc----------ceEEEEECCEEEEE
Confidence 553 2222366778999999865311 112237999999999999984 443221 33456678999988
Q ss_pred ecCCCC--CeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEEec------CCEEEEEeCCCCcEEEEE
Q 011826 345 DVTYFA--PPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLFCK------RRALVLYNPVEKNTRYLL 414 (476)
Q Consensus 345 ~~~~~~--~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~~~------~~~l~~ydl~t~~~~~v~ 414 (476)
...... .-++|+.+-. ...|+..-.++...... ..+..++.|++... ...+..||+++++++.+.
T Consensus 175 GG~~~~~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~---~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 247 (308)
T 1zgk_A 175 GGFDGTNRLNSAECYYPE--RNEWRMITAMNTIRSGA---GVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVA 247 (308)
T ss_dssp CCBCSSCBCCCEEEEETT--TTEEEECCCCSSCCBSC---EEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECC
T ss_pred eCCCCCCcCceEEEEeCC--CCeEeeCCCCCCccccc---eEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECC
Confidence 542211 3457777643 36899764433322211 12223567766632 256999999999999875
No 14
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.61 E-value=6.8e-05 Score=75.63 Aligned_cols=50 Identities=26% Similarity=0.393 Sum_probs=45.1
Q ss_pred CCCCCCCCHHHHHHHHhcCCccccceeeccchhhhhhhCChHHHHHHhhc
Q 011826 46 YSTIIDLPSHILIDILSRLPLKSIFISRCVCKTWHILISDPLFATLHFDR 95 (476)
Q Consensus 46 ~~~~~~LP~Dll~eIL~RLP~ksL~R~r~VCK~W~~lissp~F~~~~~~~ 95 (476)
...+..||+|++..||+.|++++|+++.+|||+|+.++.++.+.+.....
T Consensus 16 ~d~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~~ 65 (445)
T 2ovr_B 16 RDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKE 65 (445)
T ss_dssp CSTTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHTT
T ss_pred CChhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhheee
Confidence 44577899999999999999999999999999999999999888877654
No 15
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.47 E-value=0.00032 Score=70.82 Aligned_cols=47 Identities=23% Similarity=0.330 Sum_probs=41.4
Q ss_pred CCCCCCHHHHHHHHhcCCccccceeeccchhhhhhhCC-hHHHHHHhh
Q 011826 48 TIIDLPSHILIDILSRLPLKSIFISRCVCKTWHILISD-PLFATLHFD 94 (476)
Q Consensus 48 ~~~~LP~Dll~eIL~RLP~ksL~R~r~VCK~W~~liss-p~F~~~~~~ 94 (476)
.+..||+||+.+||+.||+++|+++..|||+|+.++.+ +...+.+..
T Consensus 14 ~~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~w~~~~~ 61 (464)
T 3v7d_B 14 LITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSLWKKLLI 61 (464)
T ss_dssp HHHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHHHHHHHH
T ss_pred ChHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHHHHHHHh
Confidence 34569999999999999999999999999999999998 777666653
No 16
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=98.45 E-value=3.6e-05 Score=74.20 Aligned_cols=197 Identities=10% Similarity=0.018 Sum_probs=118.7
Q ss_pred ccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEc-----Cc-c--ccEEEEEEeCCCceEEc
Q 011826 192 NPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFD-----DF-L--NRTAEIYSLGGAAWRKV 263 (476)
Q Consensus 192 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~-----~~-~--~~~~eVyss~t~~Wr~~ 263 (476)
..+.++||.|++|.. ++.+.+. + . . ..+... -+=+|+++.+. .. . ...+++|+..+++|+.+
T Consensus 13 ~~~~~yd~~~~~W~~-~~~~~p~-~-r-~--~~~~~~----~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~ 82 (315)
T 4asc_A 13 EGAVAYDPAANECYC-ASLSSQV-P-K-N--HVSLVT----KENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGM 82 (315)
T ss_dssp TEEEEEETTTTEEEE-EECCCCS-C-S-S--EEEEEC----TTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEEC
T ss_pred CceEEECCCCCeEec-CCCCCCC-C-c-c--ceEEEE----ECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEEC
Confidence 468999999999976 3322100 1 1 1 111111 11235555431 11 1 23488999999999998
Q ss_pred cCCCCCCccCccceEEcceEEEEEeecc-CCCCCcceEEEEECCCceEEEEc-CCCCCCCCCCccCCcceeeEEeeCCeE
Q 011826 264 GNAPWSPIAGLFPTYLNGVIHWVCDDIE-DDQSCSDCIVGFDFEDERFCVIP-APPHFAEKPKTRDNLYDMNLGVLGGCL 341 (476)
Q Consensus 264 ~~~p~~~~~~~~~v~~~G~lywl~~~~~-~~~~~~~~Il~fD~~~e~f~~i~-lP~~~~~~~~~~~~~~~~~L~~~~G~L 341 (476)
+..|. +......+.++|.+|.+..... ++......+..||+.+.+|+.++ +|... .....+..+|+|
T Consensus 83 ~~~p~-~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r----------~~~~~~~~~~~i 151 (315)
T 4asc_A 83 PPLPS-PRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVV----------YGHTVLSHMDLV 151 (315)
T ss_dssp CCBSS-CEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCC----------BSCEEEEETTEE
T ss_pred CCCCc-chhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcc----------cceeEEEECCEE
Confidence 76552 2223366788999999875421 11233447999999999999884 44332 134466789999
Q ss_pred EEEecC-CC--CCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEEec------CCEEEEEeCCCCcEEE
Q 011826 342 SICDVT-YF--APPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLFCK------RRALVLYNPVEKNTRY 412 (476)
Q Consensus 342 ~~~~~~-~~--~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~~~------~~~l~~ydl~t~~~~~ 412 (476)
+++... .. ..-++|+.+-. ...|++.-.++..+.. ...+..++.|++... ...+..||+++++++.
T Consensus 152 yv~GG~~~~~~~~~~~~~yd~~--~~~W~~~~~~p~~r~~---~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 226 (315)
T 4asc_A 152 YVIGGKGSDRKCLNKMCVYDPK--KFEWKELAPMQTARSL---FGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAP 226 (315)
T ss_dssp EEECCBCTTSCBCCCEEEEETT--TTEEEECCCCSSCCBS---CEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEE
T ss_pred EEEeCCCCCCcccceEEEEeCC--CCeEEECCCCCCchhc---eEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEE
Confidence 988653 11 22567877644 3689986544332211 122233567766532 1368999999999998
Q ss_pred EE
Q 011826 413 LL 414 (476)
Q Consensus 413 v~ 414 (476)
+.
T Consensus 227 ~~ 228 (315)
T 4asc_A 227 FE 228 (315)
T ss_dssp EC
T ss_pred CC
Confidence 85
No 17
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.41 E-value=2.5e-05 Score=76.67 Aligned_cols=199 Identities=14% Similarity=0.090 Sum_probs=114.9
Q ss_pred ccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCcc-------------------------
Q 011826 192 NPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFL------------------------- 246 (476)
Q Consensus 192 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~------------------------- 246 (476)
..++++||.|.+|..+++.+. . . ... ..+. .++ =+|+++...+..
T Consensus 86 ~~v~~yd~~~~~W~~~~~~~p-~-~-r~~-~~~~-~~~-----~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (357)
T 2uvk_A 86 NDVHKYNPKTNSWVKLMSHAP-M-G-MAG-HVTF-VHN-----GKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAH 155 (357)
T ss_dssp CCEEEEETTTTEEEECSCCCS-S-C-CSS-EEEE-EET-----TEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ccEEEEeCCCCcEEECCCCCC-c-c-ccc-ceEE-EEC-----CEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhh
Confidence 469999999999999998651 1 1 111 1111 122 256666543211
Q ss_pred -----------ccEEEEEEeCCCceEEccCCCCCCccCccceEEcceEEEEEeeccCCCCCcceEEEEEC--CCceEEEE
Q 011826 247 -----------NRTAEIYSLGGAAWRKVGNAPWSPIAGLFPTYLNGVIHWVCDDIEDDQSCSDCIVGFDF--EDERFCVI 313 (476)
Q Consensus 247 -----------~~~~eVyss~t~~Wr~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~Il~fD~--~~e~f~~i 313 (476)
...+++|+..+++|+.+...|.........+.++|.+|.+......+ .....+..||+ .+.+|+.+
T Consensus 156 ~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~-~~~~~v~~~d~d~~~~~W~~~ 234 (357)
T 2uvk_A 156 YFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPG-LRTDAVFELDFTGNNLKWNKL 234 (357)
T ss_dssp HHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETT-EECCCEEEEECC---CEEEEC
T ss_pred hccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCC-cccCceEEEEecCCCCcEEec
Confidence 25899999999999999765532222236778899999986431111 12336888887 99999987
Q ss_pred c-CCCCCCCCCCccCCcceeeEEeeCCeEEEEecCCC-------------------CCeEEEeeccCCCCcceEEEEEEe
Q 011826 314 P-APPHFAEKPKTRDNLYDMNLGVLGGCLSICDVTYF-------------------APPDIWVMKDYGVQESWIKQLSVD 373 (476)
Q Consensus 314 ~-lP~~~~~~~~~~~~~~~~~L~~~~G~L~~~~~~~~-------------------~~l~IWvl~~~~~~~~W~~~~~I~ 373 (476)
. +|.... +.....+..+|+|+++..... ..-++|+.+-. ...|++.-.++
T Consensus 235 ~~~~~~~~--------~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~--~~~W~~~~~~p 304 (357)
T 2uvk_A 235 APVSSPDG--------VAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWH--NGKWDKSGELS 304 (357)
T ss_dssp CCSSTTTC--------CBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC-----CEEEEECS
T ss_pred CCCCCCcc--------cccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecC--CCceeeCCCCC
Confidence 4 332221 113346788999988754110 01356666533 36899876555
Q ss_pred CCCcceeeEEEEecCCcEEEEec-------CCEEEEEeCCCCcEEEEE
Q 011826 374 NGYFGICRPIKYLDDGSLLLFCK-------RRALVLYNPVEKNTRYLL 414 (476)
Q Consensus 374 ~~~~~~~~p~~~~~~g~il~~~~-------~~~l~~ydl~t~~~~~v~ 414 (476)
..+.. ...+.-++.|++... ...+..++++++++.+..
T Consensus 305 ~~r~~---~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 305 QGRAY---GVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQN 349 (357)
T ss_dssp SCCBS---SEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC
T ss_pred CCccc---ceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeee
Confidence 43322 122334567766532 135778899988876653
No 18
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.34 E-value=9.8e-05 Score=74.29 Aligned_cols=47 Identities=34% Similarity=0.488 Sum_probs=41.4
Q ss_pred CCCCCCHH----HHHHHHhcCCccccceeeccchhhhhhhCChHHHHHHhh
Q 011826 48 TIIDLPSH----ILIDILSRLPLKSIFISRCVCKTWHILISDPLFATLHFD 94 (476)
Q Consensus 48 ~~~~LP~D----ll~eIL~RLP~ksL~R~r~VCK~W~~lissp~F~~~~~~ 94 (476)
.+..||+| |+..||+.|++++|+++.+|||+|+.++.++.+.+....
T Consensus 10 ~~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~ 60 (435)
T 1p22_A 10 FITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIE 60 (435)
T ss_dssp HHHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHHHHH
T ss_pred hHHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHHHHH
Confidence 34569999 999999999999999999999999999998887776554
No 19
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=98.24 E-value=4.5e-05 Score=73.59 Aligned_cols=152 Identities=17% Similarity=0.231 Sum_probs=98.3
Q ss_pred ccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEc--Cc-cccEEEEEEeCCCceEEccCCCC
Q 011826 192 NPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFD--DF-LNRTAEIYSLGGAAWRKVGNAPW 268 (476)
Q Consensus 192 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~--~~-~~~~~eVyss~t~~Wr~~~~~p~ 268 (476)
..+.++||.|.+|..+++++. . ... .. +..+ +-+|+++... +. ....+++|+..+++|+.+...|.
T Consensus 127 ~~~~~yd~~~~~W~~~~~~p~---~-r~~-~~-~~~~-----~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~ 195 (318)
T 2woz_A 127 DSVLCYDPVAAKWSEVKNLPI---K-VYG-HN-VISH-----NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKT 195 (318)
T ss_dssp EEEEEEETTTTEEEEECCCSS---C-EES-CE-EEEE-----TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSS
T ss_pred ceEEEEeCCCCCEeECCCCCC---c-ccc-cE-EEEE-----CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCC
Confidence 358999999999999987664 1 111 11 1112 1256666432 11 14579999999999999986542
Q ss_pred CCccCccceEEcceEEEEEeeccCCCCCcceEEEEECCCceEEEEc-CCCCCCCCCCccCCcceeeEEeeCCeEEEEecC
Q 011826 269 SPIAGLFPTYLNGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIP-APPHFAEKPKTRDNLYDMNLGVLGGCLSICDVT 347 (476)
Q Consensus 269 ~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~-lP~~~~~~~~~~~~~~~~~L~~~~G~L~~~~~~ 347 (476)
+......+.++|.+|.+.....+ .....+..||+.+++|..++ +|... ....++..+|+|+++...
T Consensus 196 -~r~~~~~~~~~~~iyv~GG~~~~--~~~~~~~~yd~~~~~W~~~~~~p~~r----------~~~~~~~~~~~i~v~GG~ 262 (318)
T 2woz_A 196 -PRSMFGVAIHKGKIVIAGGVTED--GLSASVEAFDLKTNKWEVMTEFPQER----------SSISLVSLAGSLYAIGGF 262 (318)
T ss_dssp -CCBSCEEEEETTEEEEEEEEETT--EEEEEEEEEETTTCCEEECCCCSSCC----------BSCEEEEETTEEEEECCB
T ss_pred -CcccceEEEECCEEEEEcCcCCC--CccceEEEEECCCCeEEECCCCCCcc----------cceEEEEECCEEEEECCe
Confidence 22223667889999998754211 12237889999999999984 44321 133567788999987542
Q ss_pred CC-----------CCeEEEeeccCCCCcceEEE
Q 011826 348 YF-----------APPDIWVMKDYGVQESWIKQ 369 (476)
Q Consensus 348 ~~-----------~~l~IWvl~~~~~~~~W~~~ 369 (476)
.. ..-++|+.+-. ...|++.
T Consensus 263 ~~~~~~~~~~~~~~~~~v~~yd~~--~~~W~~~ 293 (318)
T 2woz_A 263 AMIQLESKEFAPTEVNDIWKYEDD--KKEWAGM 293 (318)
T ss_dssp CCBC----CCBCCBCCCEEEEETT--TTEEEEE
T ss_pred eccCCCCceeccceeeeEEEEeCC--CCEehhh
Confidence 11 13578888754 3689987
No 20
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.13 E-value=0.00023 Score=76.60 Aligned_cols=200 Identities=11% Similarity=0.083 Sum_probs=116.5
Q ss_pred ccEEEEcccccceeecC-CCCCCC-CcCccceeEEEEeEeCCCCCeEEEEEEEcCc---cccEEEEEEeCCCceEEccCC
Q 011826 192 NPCIICNPITGEYVTIP-KPAAED-DKKTLRTVISGFGYSFRSKQYKVLRLVFDDF---LNRTAEIYSLGGAAWRKVGNA 266 (476)
Q Consensus 192 ~~~~V~NP~T~~~~~LP-~~~~~~-~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~---~~~~~eVyss~t~~Wr~~~~~ 266 (476)
+.++++||.|++|..++ +.+... +........+. + .. +-+|+++.+... ....+++|+..+++|+.+...
T Consensus 412 ~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~--~-~~--~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~ 486 (695)
T 2zwa_A 412 NEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTT--I-SR--NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSL 486 (695)
T ss_dssp CCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEE--E-TT--TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCC
T ss_pred CcEEEEECCCCeEEEeccCCCCCCCCccccceEEEE--E-cc--CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCC
Confidence 46999999999999998 522100 00111111111 1 10 124666644322 135699999999999999865
Q ss_pred CCCCccCccceEE-cceEEEEEeeccCCCCCcceEEEEECCCceEEEEcC----CCCCCCCCCccCCcceeeEEeeC---
Q 011826 267 PWSPIAGLFPTYL-NGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPA----PPHFAEKPKTRDNLYDMNLGVLG--- 338 (476)
Q Consensus 267 p~~~~~~~~~v~~-~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~l----P~~~~~~~~~~~~~~~~~L~~~~--- 338 (476)
|. +.....++.+ +|.+|.+... .... .+..||+.+++|..++. |.... ....+.++
T Consensus 487 p~-~R~~h~~~~~~~~~iyv~GG~---~~~~--~v~~yd~~t~~W~~~~~~g~~p~~r~----------~~~a~v~~~~~ 550 (695)
T 2zwa_A 487 SH-TRFRHSACSLPDGNVLILGGV---TEGP--AMLLYNVTEEIFKDVTPKDEFFQNSL----------VSAGLEFDPVS 550 (695)
T ss_dssp SB-CCBSCEEEECTTSCEEEECCB---CSSC--SEEEEETTTTEEEECCCSSGGGGSCC----------BSCEEEEETTT
T ss_pred CC-CcccceEEEEcCCEEEEECCC---CCCC--CEEEEECCCCceEEccCCCCCCCccc----------ceeEEEEeCCC
Confidence 53 2222245554 9999998754 1112 79999999999999863 43322 12223333
Q ss_pred CeEEEEecCCC----CCeEEEeeccCCCCc-----ceEEEEEEeC-CCcceeeEEEEecCCcEEEEec---------CCE
Q 011826 339 GCLSICDVTYF----APPDIWVMKDYGVQE-----SWIKQLSVDN-GYFGICRPIKYLDDGSLLLFCK---------RRA 399 (476)
Q Consensus 339 G~L~~~~~~~~----~~l~IWvl~~~~~~~-----~W~~~~~I~~-~~~~~~~p~~~~~~g~il~~~~---------~~~ 399 (476)
|+|+++..... ..-++|+.+-.. .. .|+++-..+. .+.. ......++|.|++... ...
T Consensus 551 ~~iyv~GG~~~~~~~~~~~v~~yd~~~-~~w~~~~~W~~~~~~p~~~R~~--~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 627 (695)
T 2zwa_A 551 KQGIILGGGFMDQTTVSDKAIIFKYDA-ENATEPITVIKKLQHPLFQRYG--SQIKYITPRKLLIVGGTSPSGLFDRTNS 627 (695)
T ss_dssp TEEEEECCBCTTSSCBCCEEEEEEECT-TCSSCCEEEEEEEECGGGCCBS--CEEEEEETTEEEEECCBCSSCCCCTTTS
T ss_pred CEEEEECCcCCCCCeeeCcEEEEEccC-CccccceEEEEcCCCCCCCccc--ceEEEeCCCEEEEECCccCCCCCCCCCe
Confidence 88988865211 124567665332 12 2887765321 1111 1233444467777632 246
Q ss_pred EEEEeCCCCcEEEEEE
Q 011826 400 LVLYNPVEKNTRYLLI 415 (476)
Q Consensus 400 l~~ydl~t~~~~~v~i 415 (476)
+..||+++++++.+.+
T Consensus 628 v~~yd~~t~~W~~~~~ 643 (695)
T 2zwa_A 628 IISLDPLSETLTSIPI 643 (695)
T ss_dssp EEEEETTTTEEEECCC
T ss_pred EEEEECCCCeEEEeec
Confidence 9999999999995543
No 21
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=97.79 E-value=4.2e-06 Score=78.55 Aligned_cols=50 Identities=24% Similarity=0.367 Sum_probs=46.1
Q ss_pred CCCCCCCHHHHHHHHhcCCccccceeeccchhhhhhhCChHHHHHHhhcC
Q 011826 47 STIIDLPSHILIDILSRLPLKSIFISRCVCKTWHILISDPLFATLHFDRN 96 (476)
Q Consensus 47 ~~~~~LP~Dll~eIL~RLP~ksL~R~r~VCK~W~~lissp~F~~~~~~~~ 96 (476)
..+..||+||+..||+.|++++|+++.+|||+||.+.+++...+.++.+.
T Consensus 3 ~~l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l~rd 52 (312)
T 3l2o_B 3 STLTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRD 52 (312)
T ss_dssp CHHHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHHHSS
T ss_pred chhHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHHhcc
Confidence 34567999999999999999999999999999999999999999888765
No 22
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.51 E-value=0.0016 Score=69.47 Aligned_cols=220 Identities=10% Similarity=-0.030 Sum_probs=117.4
Q ss_pred cccceEEEeecCCCccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEE-cCc--cccEEEEEE
Q 011826 178 SCNGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVF-DDF--LNRTAEIYS 254 (476)
Q Consensus 178 s~~GLlcl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~-~~~--~~~~~eVys 254 (476)
..+|.|++..+.....+.++||.|++|..+|+++. .+ .. ..+ ..+ + +=||+++.. .+. ....+++|+
T Consensus 251 ~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~---~R-~~-~s~-~~~-~---dg~iyv~GG~~~~~~~~~~~e~yd 320 (656)
T 1k3i_A 251 DGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQV---AR-GY-QSS-ATM-S---DGRVFTIGGSWSGGVFEKNGEVYS 320 (656)
T ss_dssp CTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSS---CC-SS-CEE-EEC-T---TSCEEEECCCCCSSSCCCCEEEEE
T ss_pred CCCCCEEEeCCCCCCceEEecCcCCceeECCCCCc---cc-cc-cce-EEe-c---CCeEEEEeCcccCCcccccceEeC
Confidence 35676666554334579999999999999997664 11 11 111 111 1 225666644 111 135799999
Q ss_pred eCCCceEEccCCCCCCc--cCc-cceEEcceEEEEEeeccC--CCCCcceEEEEECCCceEEEEcCCCCC----CCCCCc
Q 011826 255 LGGAAWRKVGNAPWSPI--AGL-FPTYLNGVIHWVCDDIED--DQSCSDCIVGFDFEDERFCVIPAPPHF----AEKPKT 325 (476)
Q Consensus 255 s~t~~Wr~~~~~p~~~~--~~~-~~v~~~G~lywl~~~~~~--~~~~~~~Il~fD~~~e~f~~i~lP~~~----~~~~~~ 325 (476)
..+++|+.+......+. ... ..+..+|.+|.+...... .......+..||+.+++|.....+... .....
T Consensus 321 ~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~- 399 (656)
T 1k3i_A 321 PSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAM- 399 (656)
T ss_dssp TTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCB-
T ss_pred CCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCC-
Confidence 99999999753211111 111 333466777776633100 001233799999999998653211111 00000
Q ss_pred cCCcceeeEEeeCCeEEEEecCCC-------C-CeEEEeeccCCCCcceEEEE--EEeCCCcceeeEEEEecCCcEEEEe
Q 011826 326 RDNLYDMNLGVLGGCLSICDVTYF-------A-PPDIWVMKDYGVQESWIKQL--SVDNGYFGICRPIKYLDDGSLLLFC 395 (476)
Q Consensus 326 ~~~~~~~~L~~~~G~L~~~~~~~~-------~-~l~IWvl~~~~~~~~W~~~~--~I~~~~~~~~~p~~~~~~g~il~~~ 395 (476)
......+-..+|+|+++..... . ...|++.+.. ...|++.. .++..+ ...-..+..+|+|++..
T Consensus 400 --~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~--~~~W~~~~~~~mp~~R--~~~~~~~l~~g~i~v~G 473 (656)
T 1k3i_A 400 --CGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPG--TSPNTVFASNGLYFAR--TFHTSVVLPDGSTFITG 473 (656)
T ss_dssp --TCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTT--SCCEEEECTTCCSSCC--BSCEEEECTTSCEEEEC
T ss_pred --CCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCC--CCCeeEEccCCCCCCc--ccCCeEECCCCCEEEEC
Confidence 0001111135788888754210 1 1245554432 36798764 232221 11223445578888764
Q ss_pred c------------CCEEEEEeCCCCcEEEEE
Q 011826 396 K------------RRALVLYNPVEKNTRYLL 414 (476)
Q Consensus 396 ~------------~~~l~~ydl~t~~~~~v~ 414 (476)
. ...+..||+++++++.+.
T Consensus 474 G~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~ 504 (656)
T 1k3i_A 474 GQRRGIPFEDSTPVFTPEIYVPEQDTFYKQN 504 (656)
T ss_dssp CBSBCCTTCCCSBCCCCEEEEGGGTEEEECC
T ss_pred CcccCcCcCCCCcccceEEEcCCCCceeecC
Confidence 2 145899999999987653
No 23
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.45 E-value=0.013 Score=62.35 Aligned_cols=110 Identities=8% Similarity=0.075 Sum_probs=69.6
Q ss_pred cEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCCCceEEccCCCCCCcc
Q 011826 193 PCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGGAAWRKVGNAPWSPIA 272 (476)
Q Consensus 193 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t~~Wr~~~~~p~~~~~ 272 (476)
.+.++||.|++|..++..+. . ... . ..+..+. .+-+|+++.... ...+++|+..++.|..+...+. +..
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~-~-~~~-~--~~~~~~~---~~g~lyv~GG~~--~~~v~~yd~~t~~W~~~~~~~~-~R~ 288 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVT-K-HDM-F--CPGISMD---GNGQIVVTGGND--AKKTSLYDSSSDSWIPGPDMQV-ARG 288 (656)
T ss_dssp EEEEECTTTCCBCCCEEEEC-S-CCC-S--SCEEEEC---TTSCEEEECSSS--TTCEEEEEGGGTEEEECCCCSS-CCS
T ss_pred EEEEEeCCCCcEEeCcccCC-C-CCC-c--cccccCC---CCCCEEEeCCCC--CCceEEecCcCCceeECCCCCc-ccc
Confidence 58899999999999886543 0 111 1 1111111 122466654432 2379999999999999875442 222
Q ss_pred CccceEE-cceEEEEEeeccCCCCCcceEEEEECCCceEEEEc
Q 011826 273 GLFPTYL-NGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIP 314 (476)
Q Consensus 273 ~~~~v~~-~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~ 314 (476)
....+.+ +|.+|-+..... +......+..||+.+++|..++
T Consensus 289 ~~s~~~~~dg~iyv~GG~~~-~~~~~~~~e~yd~~t~~W~~~~ 330 (656)
T 1k3i_A 289 YQSSATMSDGRVFTIGGSWS-GGVFEKNGEVYSPSSKTWTSLP 330 (656)
T ss_dssp SCEEEECTTSCEEEECCCCC-SSSCCCCEEEEETTTTEEEEET
T ss_pred ccceEEecCCeEEEEeCccc-CCcccccceEeCCCCCcceeCC
Confidence 2245666 999999875211 1122347999999999999973
No 24
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.38 E-value=4.4e-05 Score=74.13 Aligned_cols=43 Identities=33% Similarity=0.471 Sum_probs=39.0
Q ss_pred CCCCCCCCHHHHHHHHhcCCccccceeeccchhhhhhhCChHH
Q 011826 46 YSTIIDLPSHILIDILSRLPLKSIFISRCVCKTWHILISDPLF 88 (476)
Q Consensus 46 ~~~~~~LP~Dll~eIL~RLP~ksL~R~r~VCK~W~~lissp~F 88 (476)
...|..||+|++.+||.+|+.+++++++.|||+|+.++.+|..
T Consensus 6 ~~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~~ 48 (336)
T 2ast_B 6 GVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESL 48 (336)
T ss_dssp -CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCSTT
T ss_pred cCChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCchh
Confidence 5678999999999999999999999999999999999977653
No 25
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.35 E-value=0.0038 Score=67.06 Aligned_cols=154 Identities=15% Similarity=0.019 Sum_probs=94.0
Q ss_pred ccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCCCceEEccCCCCCCc
Q 011826 192 NPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGGAAWRKVGNAPWSPI 271 (476)
Q Consensus 192 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t~~Wr~~~~~p~~~~ 271 (476)
+.++++||.|.+|..+++++. . ... ..+...+ +-+|+++.+.+... .+++|+..+++|+.+......+.
T Consensus 468 ~dv~~yd~~t~~W~~~~~~p~---~-R~~-h~~~~~~-----~~~iyv~GG~~~~~-~v~~yd~~t~~W~~~~~~g~~p~ 536 (695)
T 2zwa_A 468 SDNWIFDMKTREWSMIKSLSH---T-RFR-HSACSLP-----DGNVLILGGVTEGP-AMLLYNVTEEIFKDVTPKDEFFQ 536 (695)
T ss_dssp CCCEEEETTTTEEEECCCCSB---C-CBS-CEEEECT-----TSCEEEECCBCSSC-SEEEEETTTTEEEECCCSSGGGG
T ss_pred ccEEEEeCCCCcEEECCCCCC---C-ccc-ceEEEEc-----CCEEEEECCCCCCC-CEEEEECCCCceEEccCCCCCCC
Confidence 468999999999999988664 1 111 1111111 22455654432222 79999999999999885321222
Q ss_pred cCc--cceEEc---ceEEEEEeeccCCCCCcceEEEEECCCce------EEEEcC-CCCCCCCCCccCCcceeeEEeeC-
Q 011826 272 AGL--FPTYLN---GVIHWVCDDIEDDQSCSDCIVGFDFEDER------FCVIPA-PPHFAEKPKTRDNLYDMNLGVLG- 338 (476)
Q Consensus 272 ~~~--~~v~~~---G~lywl~~~~~~~~~~~~~Il~fD~~~e~------f~~i~l-P~~~~~~~~~~~~~~~~~L~~~~- 338 (476)
... .++.++ |.+|.+.....++......+..||+.+++ |..+.- |+.. +.....+..+
T Consensus 537 ~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~---------R~~~~~~~~~~ 607 (695)
T 2zwa_A 537 NSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQ---------RYGSQIKYITP 607 (695)
T ss_dssp SCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGC---------CBSCEEEEEET
T ss_pred cccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCC---------cccceEEEeCC
Confidence 222 446667 88999875422222234579999999999 877732 3211 1233456677
Q ss_pred CeEEEEecCCC-----CCeEEEeeccCCCCcceE
Q 011826 339 GCLSICDVTYF-----APPDIWVMKDYGVQESWI 367 (476)
Q Consensus 339 G~L~~~~~~~~-----~~l~IWvl~~~~~~~~W~ 367 (476)
|+|+++..... ..-+||+++-. ...|+
T Consensus 608 ~~iyv~GG~~~~~~~~~~~~v~~yd~~--t~~W~ 639 (695)
T 2zwa_A 608 RKLLIVGGTSPSGLFDRTNSIISLDPL--SETLT 639 (695)
T ss_dssp TEEEEECCBCSSCCCCTTTSEEEEETT--TTEEE
T ss_pred CEEEEECCccCCCCCCCCCeEEEEECC--CCeEE
Confidence 99998865211 23567777644 36898
No 26
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.82 E-value=0.00025 Score=74.41 Aligned_cols=38 Identities=21% Similarity=0.386 Sum_probs=29.6
Q ss_pred cCCCCCCCCHHHHHHHHhcCC-ccccceeeccchhhhhh
Q 011826 45 HYSTIIDLPSHILIDILSRLP-LKSIFISRCVCKTWHIL 82 (476)
Q Consensus 45 ~~~~~~~LP~Dll~eIL~RLP-~ksL~R~r~VCK~W~~l 82 (476)
....|+.||+|++.+||++|| .+++++++.|||+|+.+
T Consensus 2 ~~d~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 2 QKRIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp --------CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred cccchhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 346788999999999999999 99999999999999998
No 27
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.02 E-value=0.87 Score=41.77 Aligned_cols=192 Identities=9% Similarity=-0.040 Sum_probs=99.5
Q ss_pred EEecccceEEEeecCCCccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEE
Q 011826 175 IVNSCNGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYS 254 (476)
Q Consensus 175 ~~~s~~GLlcl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVys 254 (476)
+....+|.|.+.... ...++++|| +++...+..+.. .....++.+|+.. ++...... ...+.+|+
T Consensus 104 i~~~~~g~l~v~~~~-~~~i~~~d~-~g~~~~~~~~~~-------~~~~~~i~~~~~g---~l~v~~~~---~~~i~~~~ 168 (299)
T 2z2n_A 104 ITEGPNGDIWFTEMN-GNRIGRITD-DGKIREYELPNK-------GSYPSFITLGSDN---ALWFTENQ---NNAIGRIT 168 (299)
T ss_dssp EEECTTSCEEEEETT-TTEEEEECT-TCCEEEEECSST-------TCCEEEEEECTTS---CEEEEETT---TTEEEEEC
T ss_pred eEECCCCCEEEEecC-CceEEEECC-CCCEEEecCCCC-------CCCCceEEEcCCC---CEEEEeCC---CCEEEEEc
Confidence 444456766665532 356899999 777665543211 1134566677643 23332211 24677777
Q ss_pred eCCCceEEccCCCCCCccCccceEE--cceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCccee
Q 011826 255 LGGAAWRKVGNAPWSPIAGLFPTYL--NGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDM 332 (476)
Q Consensus 255 s~t~~Wr~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~~ 332 (476)
. ++....+..+... ....++.+ +|.+|+.... ...|..||. +.++..+.+|..... ..
T Consensus 169 ~-~g~~~~~~~~~~~--~~~~~i~~~~~g~l~v~~~~-------~~~i~~~~~-~g~~~~~~~~~~~~~---------~~ 228 (299)
T 2z2n_A 169 E-SGDITEFKIPTPA--SGPVGITKGNDDALWFVEII-------GNKIGRITT-SGEITEFKIPTPNAR---------PH 228 (299)
T ss_dssp T-TCCEEEEECSSTT--CCEEEEEECTTSSEEEEETT-------TTEEEEECT-TCCEEEEECSSTTCC---------EE
T ss_pred C-CCcEEEeeCCCCC--CcceeEEECCCCCEEEEccC-------CceEEEECC-CCcEEEEECCCCCCC---------ce
Confidence 7 7776654322111 11134444 4777554321 238999999 777777766632211 22
Q ss_pred eEEe-eCCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEEecCCEEEEEeCCCCcE
Q 011826 333 NLGV-LGGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLFCKRRALVLYNPVEKNT 410 (476)
Q Consensus 333 ~L~~-~~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~~~~~~l~~ydl~t~~~ 410 (476)
.+.. -+|.|++... ....+.+|-. .+ .. ..+.++.. .....-+.+ .+|.+++....+.++.+|++++++
T Consensus 229 ~i~~~~~g~l~v~~~-~~~~i~~~d~--~g---~~-~~~~~~~~-~~~~~~i~~-~~g~l~v~~~~~~l~~~~~~~~~~ 298 (299)
T 2z2n_A 229 AITAGAGIDLWFTEW-GANKIGRLTS--NN---II-EEYPIQIK-SAEPHGICF-DGETIWFAMECDKIGKLTLIKDNM 298 (299)
T ss_dssp EEEECSTTCEEEEET-TTTEEEEEET--TT---EE-EEEECSSS-SCCEEEEEE-CSSCEEEEETTTEEEEEEEC----
T ss_pred eEEECCCCCEEEecc-CCceEEEECC--CC---ce-EEEeCCCC-CCccceEEe-cCCCEEEEecCCcEEEEEcCcccC
Confidence 2333 3578877764 2344544433 22 11 12222211 111223445 778888877678999999988765
No 28
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=95.35 E-value=0.0035 Score=65.61 Aligned_cols=33 Identities=12% Similarity=0.372 Sum_probs=31.4
Q ss_pred CCCCHHHHHHHHhcC-Cccccceeeccchhhhhh
Q 011826 50 IDLPSHILIDILSRL-PLKSIFISRCVCKTWHIL 82 (476)
Q Consensus 50 ~~LP~Dll~eIL~RL-P~ksL~R~r~VCK~W~~l 82 (476)
..||+|++.+||.+| |.+++.++..|||+|+.+
T Consensus 14 ~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 14 VATVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 469999999999999 899999999999999988
No 29
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=91.51 E-value=11 Score=36.67 Aligned_cols=198 Identities=12% Similarity=0.065 Sum_probs=96.6
Q ss_pred cccceEEEeecCCCccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCC
Q 011826 178 SCNGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGG 257 (476)
Q Consensus 178 s~~GLlcl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t 257 (476)
|.+++|.+.. ++.++|||..|++...+-.... .......+.|.+. +.| ++....+ ..+.|++..+
T Consensus 114 S~~n~lAvgl---d~tV~lWd~~tg~~~~~~~~~~------~~~~V~sv~fspd-g~~--lasgs~D---g~v~iWd~~~ 178 (420)
T 4gga_A 114 SSGNVLAVAL---DNSVYLWSASSGDILQLLQMEQ------PGEYISSVAWIKE-GNY--LAVGTSS---AEVQLWDVQQ 178 (420)
T ss_dssp CTTSEEEEEE---TTEEEEEETTTCCEEEEEECCS------TTCCEEEEEECTT-SSE--EEEEETT---SCEEEEETTT
T ss_pred CCCCEEEEEe---CCEEEEEECCCCCEEEEEEecC------CCCcEEEEEECCC-CCE--EEEEECC---CeEEEEEcCC
Confidence 3566665543 4579999999998766543221 0123456777664 333 3333333 4688999888
Q ss_pred CceEEccCCCCCCccCccceEEcceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCcceeeEEee
Q 011826 258 AAWRKVGNAPWSPIAGLFPTYLNGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMNLGVL 337 (476)
Q Consensus 258 ~~Wr~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~~~L~~~ 337 (476)
+.--........ ...++..+|.+-..... ...+..+|..........+...... .......-
T Consensus 179 ~~~~~~~~~h~~---~v~~~s~~~~~l~sgs~-------d~~i~~~d~~~~~~~~~~~~~h~~~--------~~~~~~~~ 240 (420)
T 4gga_A 179 QKRLRNMTSHSA---RVGSLSWNSYILSSGSR-------SGHIHHHDVRVAEHHVATLSGHSQE--------VCGLRWAP 240 (420)
T ss_dssp TEEEEEECCCSS---CEEEEEEETTEEEEEET-------TSEEEEEETTSSSCEEEEEECCSSC--------EEEEEECT
T ss_pred CcEEEEEeCCCC---ceEEEeeCCCEEEEEeC-------CCceeEeeecccceeeEEecccccc--------eeeeeecC
Confidence 742211111100 11344555554333322 2377888877654433322221111 01111222
Q ss_pred CCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCC-cEEEEe---cCCEEEEEeCCCCcEEE
Q 011826 338 GGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDG-SLLLFC---KRRALVLYNPVEKNTRY 412 (476)
Q Consensus 338 ~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g-~il~~~---~~~~l~~ydl~t~~~~~ 412 (476)
.|...+... .+..+.||-..... ..+........ .......+.+...+ .++... .++.+..||+.+++...
T Consensus 241 ~g~~l~s~~-~D~~v~i~~~~~~~--~~~~~~~~~~~-~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~ 315 (420)
T 4gga_A 241 DGRHLASGG-NDNLVNVWPSAPGE--GGWVPLQTFTQ-HQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLS 315 (420)
T ss_dssp TSSEEEEEE-TTSCEEEEESSCCS--SCSCCSEEECC-CSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEE
T ss_pred CCCeeeeee-ccccceEEeecccc--ccceeeeeecc-cCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccce
Confidence 344444433 56789999876543 12221111111 11112233444433 555442 35778889998876543
No 30
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=87.44 E-value=16 Score=32.95 Aligned_cols=207 Identities=10% Similarity=0.010 Sum_probs=105.6
Q ss_pred EEecccceEEEeecCCCccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEE
Q 011826 175 IVNSCNGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYS 254 (476)
Q Consensus 175 ~~~s~~GLlcl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVys 254 (476)
+..+.+|-+.+... ....+.+|||..+....++.... . ........++.+++..+ ++++.... ....+.+|+
T Consensus 35 v~~~~~g~l~v~~~-~~~~i~~~d~~g~~~~~~~~~~~-~--~~~~~~p~~i~~~~~~g--~l~v~~~~--~~~~i~~~d 106 (286)
T 1q7f_A 35 VAVNAQNDIIVADT-NNHRIQIFDKEGRFKFQFGECGK-R--DSQLLYPNRVAVVRNSG--DIIVTERS--PTHQIQIYN 106 (286)
T ss_dssp EEECTTCCEEEEEG-GGTEEEEECTTSCEEEEECCBSS-S--TTCBSSEEEEEEETTTT--EEEEEECG--GGCEEEEEC
T ss_pred EEECCCCCEEEEEC-CCCEEEEECCCCcEEEEecccCC-C--cccccCceEEEEEcCCC--eEEEEcCC--CCCEEEEEC
Confidence 44445676666543 23569999998666666654221 0 01112345666654333 23333221 124677888
Q ss_pred eCCCceEEccCCCCCCccCccceEE--cceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCccee
Q 011826 255 LGGAAWRKVGNAPWSPIAGLFPTYL--NGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDM 332 (476)
Q Consensus 255 s~t~~Wr~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~~ 332 (476)
.....-+.+.... .. ...++.+ +|.+|..... ...|..||...+....+..+..... ..
T Consensus 107 ~~g~~~~~~~~~~-~~--~~~~i~~~~~g~l~v~~~~-------~~~i~~~~~~g~~~~~~~~~~~~~~---------p~ 167 (286)
T 1q7f_A 107 QYGQFVRKFGATI-LQ--HPRGVTVDNKGRIIVVECK-------VMRVIIFDQNGNVLHKFGCSKHLEF---------PN 167 (286)
T ss_dssp TTSCEEEEECTTT-CS--CEEEEEECTTSCEEEEETT-------TTEEEEECTTSCEEEEEECTTTCSS---------EE
T ss_pred CCCcEEEEecCcc-CC--CceEEEEeCCCCEEEEECC-------CCEEEEEcCCCCEEEEeCCCCccCC---------cE
Confidence 4333223332211 10 1133333 5776554322 2389999988776666654322111 22
Q ss_pred eEE-eeCCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCC-CcceeeEEEEecCCcEEEEecC-C-EEEEEeCCCC
Q 011826 333 NLG-VLGGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNG-YFGICRPIKYLDDGSLLLFCKR-R-ALVLYNPVEK 408 (476)
Q Consensus 333 ~L~-~~~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~-~~~~~~p~~~~~~g~il~~~~~-~-~l~~ydl~t~ 408 (476)
.+. .-+|.|+++.. ....+.+|-.+ + .. ...+... ......-+.+..+|.+++.... + .+..||.+++
T Consensus 168 ~i~~~~~g~l~v~~~-~~~~i~~~~~~--g---~~--~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~ 239 (286)
T 1q7f_A 168 GVVVNDKQEIFISDN-RAHCVKVFNYE--G---QY--LRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQ 239 (286)
T ss_dssp EEEECSSSEEEEEEG-GGTEEEEEETT--C---CE--EEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSC
T ss_pred EEEECCCCCEEEEEC-CCCEEEEEcCC--C---CE--EEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCC
Confidence 233 23578887765 34557676532 2 12 1223221 1111123455567888887643 3 8999999887
Q ss_pred cEEEEEEe
Q 011826 409 NTRYLLIH 416 (476)
Q Consensus 409 ~~~~v~i~ 416 (476)
.++.+...
T Consensus 240 ~~~~~~~~ 247 (286)
T 1q7f_A 240 LISALESK 247 (286)
T ss_dssp EEEEEEES
T ss_pred EEEEEccc
Confidence 77776543
No 31
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=87.33 E-value=16 Score=32.86 Aligned_cols=188 Identities=10% Similarity=-0.045 Sum_probs=96.1
Q ss_pred EEecccceEEEeecCCCccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEE
Q 011826 175 IVNSCNGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYS 254 (476)
Q Consensus 175 ~~~s~~GLlcl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVys 254 (476)
+....+|-+.+... ....++++||. ++...++.+.. .....++.+|+..+ +...... ...+.+|+
T Consensus 109 i~~~~~g~l~v~~~-~~~~i~~~~~~-g~~~~~~~~~~-------~~~~~~i~~d~~g~---l~v~~~~---~~~i~~~~ 173 (300)
T 2qc5_A 109 ITEGLNGDIWFTQL-NGDRIGKLTAD-GTIYEYDLPNK-------GSYPAFITLGSDNA---LWFTENQ---NNSIGRIT 173 (300)
T ss_dssp EEECSTTCEEEEET-TTTEEEEECTT-SCEEEEECSST-------TCCEEEEEECTTSS---EEEEETT---TTEEEEEC
T ss_pred ceECCCCCEEEEcc-CCCeEEEECCC-CCEEEccCCCC-------CCCceeEEECCCCC---EEEEecC---CCeEEEEC
Confidence 33334676666553 23468899997 66654432211 12345677776432 3332221 23577777
Q ss_pred eCCCceEEccCCCCCCccCccceEE--cceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCccee
Q 011826 255 LGGAAWRKVGNAPWSPIAGLFPTYL--NGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDM 332 (476)
Q Consensus 255 s~t~~Wr~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~~ 332 (476)
. ++....+..+... ....++.+ +|.+|+.... ...|..||. +.++..+.+|..... ..
T Consensus 174 ~-~g~~~~~~~~~~~--~~~~~i~~d~~g~l~v~~~~-------~~~i~~~~~-~g~~~~~~~~~~~~~---------~~ 233 (300)
T 2qc5_A 174 N-TGKLEEYPLPTNA--AAPVGITSGNDGALWFVEIM-------GNKIGRITT-TGEISEYDIPTPNAR---------PH 233 (300)
T ss_dssp T-TCCEEEEECSSTT--CCEEEEEECTTSSEEEEETT-------TTEEEEECT-TCCEEEEECSSTTCC---------EE
T ss_pred C-CCcEEEeeCCCCC--CCcceEEECCCCCEEEEccC-------CCEEEEEcC-CCcEEEEECCCCCCC---------ce
Confidence 7 6666654422111 11134444 4777654422 237999999 667777766633211 22
Q ss_pred eEEe-eCCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEEecCCEEEEEeCC
Q 011826 333 NLGV-LGGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLFCKRRALVLYNPV 406 (476)
Q Consensus 333 ~L~~-~~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~~~~~~l~~ydl~ 406 (476)
.+.. -+|.|++... ....+..+-. .+ ... .+.++.. .....-+.+..+|.+++.... .++.||++
T Consensus 234 ~i~~d~~g~l~v~~~-~~~~i~~~~~--~g---~~~-~~~~~~~-~~~~~~i~~~~~g~l~v~~~~-~i~~~~p~ 299 (300)
T 2qc5_A 234 AITAGKNSEIWFTEW-GANQIGRITN--DN---TIQ-EYQLQTE-NAEPHGITFGKDGSVWFALKC-KIGKLNLN 299 (300)
T ss_dssp EEEECSTTCEEEEET-TTTEEEEECT--TS---CEE-EEECCST-TCCCCCEEECTTSCEEEECSS-EEEEEEEC
T ss_pred EEEECCCCCEEEecc-CCCeEEEECC--CC---cEE-EEECCcc-CCccceeEeCCCCCEEEEccC-ceEEeCCC
Confidence 2332 3577887764 2344444433 22 222 2222211 111122344557788887664 89888875
No 32
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=86.88 E-value=20 Score=33.50 Aligned_cols=197 Identities=8% Similarity=-0.086 Sum_probs=102.7
Q ss_pred cceEEEeec---CCCccEEEEcccccceee-cCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEe
Q 011826 180 NGFLCLRKP---FHRNPCIICNPITGEYVT-IPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSL 255 (476)
Q Consensus 180 ~GLlcl~~~---~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss 255 (476)
+|++.+... .....+.++||.|++... ++.... .........++.++. +. ++..... .-.+.|++.
T Consensus 2 ~g~~v~neg~~g~~~~~l~~~d~~t~~~~~~i~~~~n---~~~lg~~~~~i~~~~---~~-lyv~~~~---~~~v~viD~ 71 (328)
T 3dsm_A 2 SGLFITNEGNFQYSNATLSYYDPATCEVENEVFYRAN---GFKLGDVAQSMVIRD---GI-GWIVVNN---SHVIFAIDI 71 (328)
T ss_dssp CEEEEEECCCTTSCCBEEEEEETTTTEEECSHHHHHH---SSCCBSCEEEEEEET---TE-EEEEEGG---GTEEEEEET
T ss_pred CeEEEEecCCCCCCCceEEEEECCCCEEhhhhHhhhc---CcccCccceEEEEEC---CE-EEEEEcC---CCEEEEEEC
Confidence 466555543 124579999999998653 211000 000011223344443 22 3333222 247889999
Q ss_pred CCCce-EEccCCCCCCccCccceE--EcceEEEEEeeccCCCCCcceEEEEECCCceEE-EEcCCCCCCCCCCccCCcce
Q 011826 256 GGAAW-RKVGNAPWSPIAGLFPTY--LNGVIHWVCDDIEDDQSCSDCIVGFDFEDERFC-VIPAPPHFAEKPKTRDNLYD 331 (476)
Q Consensus 256 ~t~~W-r~~~~~p~~~~~~~~~v~--~~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~-~i~lP~~~~~~~~~~~~~~~ 331 (476)
.+++- +.+.... ....+. -+|.+|..... ...|..+|+.+.+.. .++++...... .. .
T Consensus 72 ~t~~~~~~i~~~~-----~p~~i~~~~~g~lyv~~~~-------~~~v~~iD~~t~~~~~~i~~g~~~~~~-----~~-p 133 (328)
T 3dsm_A 72 NTFKEVGRITGFT-----SPRYIHFLSDEKAYVTQIW-------DYRIFIINPKTYEITGYIECPDMDMES-----GS-T 133 (328)
T ss_dssp TTCCEEEEEECCS-----SEEEEEEEETTEEEEEEBS-------CSEEEEEETTTTEEEEEEECTTCCTTT-----CB-C
T ss_pred cccEEEEEcCCCC-----CCcEEEEeCCCeEEEEECC-------CCeEEEEECCCCeEEEEEEcCCccccC-----CC-c
Confidence 88865 3342111 112222 57877765522 238999999998775 56665521110 00 1
Q ss_pred eeEEeeCCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEEecC-----------CEE
Q 011826 332 MNLGVLGGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLFCKR-----------RAL 400 (476)
Q Consensus 332 ~~L~~~~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~~~~-----------~~l 400 (476)
..++..+|+|+++.......+.++-++. ... ..+|+.+.. ..-+.+..+|++++.... ..+
T Consensus 134 ~~i~~~~~~lyv~~~~~~~~v~viD~~t----~~~--~~~i~~g~~--p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v 205 (328)
T 3dsm_A 134 EQMVQYGKYVYVNCWSYQNRILKIDTET----DKV--VDELTIGIQ--PTSLVMDKYNKMWTITDGGYEGSPYGYEAPSL 205 (328)
T ss_dssp CCEEEETTEEEEEECTTCCEEEEEETTT----TEE--EEEEECSSC--BCCCEECTTSEEEEEBCCBCTTCSSCBCCCEE
T ss_pred ceEEEECCEEEEEcCCCCCEEEEEECCC----CeE--EEEEEcCCC--ccceEEcCCCCEEEEECCCccCCccccCCceE
Confidence 1233467889888642234444443332 122 234444211 112345667888777543 589
Q ss_pred EEEeCCCCcEEE
Q 011826 401 VLYNPVEKNTRY 412 (476)
Q Consensus 401 ~~ydl~t~~~~~ 412 (476)
..+|++++++..
T Consensus 206 ~~id~~t~~v~~ 217 (328)
T 3dsm_A 206 YRIDAETFTVEK 217 (328)
T ss_dssp EEEETTTTEEEE
T ss_pred EEEECCCCeEEE
Confidence 999999988753
No 33
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=86.39 E-value=19 Score=32.73 Aligned_cols=192 Identities=10% Similarity=0.067 Sum_probs=99.4
Q ss_pred CccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCCCceEEccCCC-CC
Q 011826 191 RNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGGAAWRKVGNAP-WS 269 (476)
Q Consensus 191 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t~~Wr~~~~~p-~~ 269 (476)
...++++||.++ ...+..+. ....++.+|+... +++.... ...+.+|+..++..+.+.... ..
T Consensus 49 ~~~i~~~~~~~~-~~~~~~~~---------~~~~~l~~~~dg~---l~v~~~~---~~~i~~~d~~~g~~~~~~~~~~~~ 112 (296)
T 3e5z_A 49 QNRTWAWSDDGQ-LSPEMHPS---------HHQNGHCLNKQGH---LIACSHG---LRRLERQREPGGEWESIADSFEGK 112 (296)
T ss_dssp GTEEEEEETTSC-EEEEESSC---------SSEEEEEECTTCC---EEEEETT---TTEEEEECSTTCCEEEEECEETTE
T ss_pred CCEEEEEECCCC-eEEEECCC---------CCcceeeECCCCc---EEEEecC---CCeEEEEcCCCCcEEEEeeccCCC
Confidence 357999999998 65554322 1245677777432 3332221 246888888888877653221 11
Q ss_pred CccCccceEE--cceEEEEEee---cc-------CCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCcceeeEE-e
Q 011826 270 PIAGLFPTYL--NGVIHWVCDD---IE-------DDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMNLG-V 336 (476)
Q Consensus 270 ~~~~~~~v~~--~G~lywl~~~---~~-------~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~~~L~-~ 336 (476)
.......+.+ +|.+|..... .. ........|..+|.. .++..+.-.. . . .-.++ .
T Consensus 113 ~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~--~-~--------~~gi~~s 180 (296)
T 3e5z_A 113 KLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDR--V-K--------PNGLAFL 180 (296)
T ss_dssp ECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCC--S-S--------EEEEEEC
T ss_pred CCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCC--C-C--------CccEEEC
Confidence 1111123333 5776553210 00 000112379999987 5555442111 1 0 11122 2
Q ss_pred eCCeEEEEecCCCCCeEEEeeccCCCCcce-EEEEEEeCCCcceeeEEEEecCCcEEEEecCCEEEEEeCCCCcEEEEEE
Q 011826 337 LGGCLSICDVTYFAPPDIWVMKDYGVQESW-IKQLSVDNGYFGICRPIKYLDDGSLLLFCKRRALVLYNPVEKNTRYLLI 415 (476)
Q Consensus 337 ~~G~L~~~~~~~~~~l~IWvl~~~~~~~~W-~~~~~I~~~~~~~~~p~~~~~~g~il~~~~~~~l~~ydl~t~~~~~v~i 415 (476)
-+|++.++.. ....+.+|-+++.+ .. .....+.. ......-+.+..+|.+++.. .+.|..||++++.+..+..
T Consensus 181 ~dg~~lv~~~-~~~~i~~~~~~~~g---~~~~~~~~~~~-~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~g~~~~~~~~ 254 (296)
T 3e5z_A 181 PSGNLLVSDT-GDNATHRYCLNARG---ETEYQGVHFTV-EPGKTDGLRVDAGGLIWASA-GDGVHVLTPDGDELGRVLT 254 (296)
T ss_dssp TTSCEEEEET-TTTEEEEEEECSSS---CEEEEEEEECC-SSSCCCSEEEBTTSCEEEEE-TTEEEEECTTSCEEEEEEC
T ss_pred CCCCEEEEeC-CCCeEEEEEECCCC---cCcCCCeEeeC-CCCCCCeEEECCCCCEEEEc-CCeEEEECCCCCEEEEEEC
Confidence 2465554443 44567777776332 34 32323311 11111224566788888877 7899999999877776664
Q ss_pred e
Q 011826 416 H 416 (476)
Q Consensus 416 ~ 416 (476)
.
T Consensus 255 ~ 255 (296)
T 3e5z_A 255 P 255 (296)
T ss_dssp S
T ss_pred C
Confidence 3
No 34
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=86.35 E-value=18 Score=32.54 Aligned_cols=192 Identities=16% Similarity=0.179 Sum_probs=97.6
Q ss_pred cccceEEEeecCCCccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCC
Q 011826 178 SCNGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGG 257 (476)
Q Consensus 178 s~~GLlcl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t 257 (476)
..+|-|.+........+.++|+..+....+..... ....++.+|+.. ++++.... ...+.+|+...
T Consensus 86 ~~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~~--------~~~~~i~~~~~g---~l~v~~~~---~~~i~~~~~~g 151 (286)
T 1q7f_A 86 RNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATIL--------QHPRGVTVDNKG---RIIVVECK---VMRVIIFDQNG 151 (286)
T ss_dssp TTTTEEEEEECGGGCEEEEECTTSCEEEEECTTTC--------SCEEEEEECTTS---CEEEEETT---TTEEEEECTTS
T ss_pred cCCCeEEEEcCCCCCEEEEECCCCcEEEEecCccC--------CCceEEEEeCCC---CEEEEECC---CCEEEEEcCCC
Confidence 45777666653223579999965554445543221 124566777743 23333222 24677777654
Q ss_pred CceEEccCCCCCCccCccceEE--cceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCcceeeEE
Q 011826 258 AAWRKVGNAPWSPIAGLFPTYL--NGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMNLG 335 (476)
Q Consensus 258 ~~Wr~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~~~L~ 335 (476)
..-+.+....... ...++.+ +|.+|..... ...|..||...+....+..+.... . ...+.
T Consensus 152 ~~~~~~~~~~~~~--~p~~i~~~~~g~l~v~~~~-------~~~i~~~~~~g~~~~~~~~~g~~~-~--------p~~i~ 213 (286)
T 1q7f_A 152 NVLHKFGCSKHLE--FPNGVVVNDKQEIFISDNR-------AHCVKVFNYEGQYLRQIGGEGITN-Y--------PIGVG 213 (286)
T ss_dssp CEEEEEECTTTCS--SEEEEEECSSSEEEEEEGG-------GTEEEEEETTCCEEEEESCTTTSC-S--------EEEEE
T ss_pred CEEEEeCCCCccC--CcEEEEECCCCCEEEEECC-------CCEEEEEcCCCCEEEEEccCCccC-C--------CcEEE
Confidence 4333333211111 1134444 4776554322 338999999877666665432111 1 22233
Q ss_pred e-eCCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEEecCCEEEEEeCCC
Q 011826 336 V-LGGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLFCKRRALVLYNPVE 407 (476)
Q Consensus 336 ~-~~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~~~~~~l~~ydl~t 407 (476)
. -+|.|+++.......+.+|-.+ + ........... .....-+.+..+|.+++...+..+..|+...
T Consensus 214 ~d~~G~l~v~~~~~~~~i~~~~~~--g---~~~~~~~~~~~-~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 214 INSNGEILIADNHNNFNLTIFTQD--G---QLISALESKVK-HAQCFDVALMDDGSVVLASKDYRLYIYRYVQ 280 (286)
T ss_dssp ECTTCCEEEEECSSSCEEEEECTT--S---CEEEEEEESSC-CSCEEEEEEETTTEEEEEETTTEEEEEECSC
T ss_pred ECCCCCEEEEeCCCCEEEEEECCC--C---CEEEEEcccCC-CCcceeEEECCCCcEEEECCCCeEEEEEccc
Confidence 3 3678888876222267777532 2 12222221111 1111234556778887776667788887654
No 35
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=86.22 E-value=20 Score=32.85 Aligned_cols=150 Identities=10% Similarity=0.117 Sum_probs=75.7
Q ss_pred cEEEEEEeCC-CceEEcc--CCCCCCccCccceEE--cceEEEEEeeccCCCCCcceEEEEECC--CceEE---EEc-CC
Q 011826 248 RTAEIYSLGG-AAWRKVG--NAPWSPIAGLFPTYL--NGVIHWVCDDIEDDQSCSDCIVGFDFE--DERFC---VIP-AP 316 (476)
Q Consensus 248 ~~~eVyss~t-~~Wr~~~--~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~Il~fD~~--~e~f~---~i~-lP 316 (476)
..+.+|+..+ +....+. ............+.+ +|...+++.. ....|..+|+. +.++. .+. +|
T Consensus 151 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~------~~~~i~~~~~~~~~g~~~~~~~~~~~~ 224 (343)
T 1ri6_A 151 DRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNE------LNSSVDVWELKDPHGNIECVQTLDMMP 224 (343)
T ss_dssp TEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEET------TTTEEEEEESSCTTSCCEEEEEEECSC
T ss_pred CEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeC------CCCEEEEEEecCCCCcEEEEeeccccC
Confidence 4688999887 7665332 100000000022222 4553333321 12378889984 34443 232 44
Q ss_pred CCCCCCCCccCCcceeeEEe-eCC-eEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEE
Q 011826 317 PHFAEKPKTRDNLYDMNLGV-LGG-CLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLF 394 (476)
Q Consensus 317 ~~~~~~~~~~~~~~~~~L~~-~~G-~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~ 394 (476)
...... .....+.- -+| .|++... .+..+.+|-++..+ ..+.....+..... ..-+.+..+|+.++.
T Consensus 225 ~~~~~~------~~~~~i~~s~dg~~l~v~~~-~~~~i~v~d~~~~~--~~~~~~~~~~~~~~--~~~~~~s~dg~~l~~ 293 (343)
T 1ri6_A 225 ENFSDT------RWAADIHITPDGRHLYACDR-TASLITVFSVSEDG--SVLSKEGFQPTETQ--PRGFNVDHSGKYLIA 293 (343)
T ss_dssp TTCCSC------CCEEEEEECTTSSEEEEEET-TTTEEEEEEECTTS--CCEEEEEEEECSSS--CCCEEECTTSSEEEE
T ss_pred cccccc------CCccceEECCCCCEEEEEec-CCCEEEEEEEcCCC--CceEEeeeecCCCc--cceEEECCCCCEEEE
Confidence 332111 00112222 234 4555543 46779999997533 35666666665321 233566778875555
Q ss_pred ec--CCEEEEE--eCCCCcEEEEE
Q 011826 395 CK--RRALVLY--NPVEKNTRYLL 414 (476)
Q Consensus 395 ~~--~~~l~~y--dl~t~~~~~v~ 414 (476)
.. ++.+..| |.++++++.+.
T Consensus 294 ~~~~~~~v~v~~~d~~~g~~~~~~ 317 (343)
T 1ri6_A 294 AGQKSHHISVYEIVGEQGLLHEKG 317 (343)
T ss_dssp ECTTTCEEEEEEEETTTTEEEEEE
T ss_pred ecCCCCeEEEEEEcCCCceeeEcc
Confidence 43 4666666 77788777664
No 36
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=86.12 E-value=23 Score=33.44 Aligned_cols=190 Identities=10% Similarity=0.023 Sum_probs=97.3
Q ss_pred EEecccc-eEEEeecCCCccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEE
Q 011826 175 IVNSCNG-FLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIY 253 (476)
Q Consensus 175 ~~~s~~G-Llcl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVy 253 (476)
+.-+.+| .|++... .+..+.|||+.|++....-... ....++.+++.. .+ ++..... ...+.+|
T Consensus 37 ~~~s~dg~~l~~~~~-~d~~i~v~d~~~~~~~~~~~~~---------~~v~~~~~spdg-~~-l~~~~~~---~~~v~v~ 101 (391)
T 1l0q_A 37 AVISPDGTKVYVANA-HSNDVSIIDTATNNVIATVPAG---------SSPQGVAVSPDG-KQ-VYVTNMA---SSTLSVI 101 (391)
T ss_dssp EEECTTSSEEEEEEG-GGTEEEEEETTTTEEEEEEECS---------SSEEEEEECTTS-SE-EEEEETT---TTEEEEE
T ss_pred EEECCCCCEEEEECC-CCCeEEEEECCCCeEEEEEECC---------CCccceEECCCC-CE-EEEEECC---CCEEEEE
Confidence 3334455 3434432 2457999999998865433221 134566676643 32 3222222 2478899
Q ss_pred EeCCCceEEccCCCCCCccCccceEE--cceEEEEEeeccCCCCCcceEEEEECCCceEEEE-cCCCCCCCCCCccCCcc
Q 011826 254 SLGGAAWRKVGNAPWSPIAGLFPTYL--NGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVI-PAPPHFAEKPKTRDNLY 330 (476)
Q Consensus 254 ss~t~~Wr~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i-~lP~~~~~~~~~~~~~~ 330 (476)
+..++.-...-..... ..++.+ +|...+++.. ....|..+|+.+.+.... .....
T Consensus 102 d~~~~~~~~~~~~~~~----~~~~~~s~dg~~l~~~~~------~~~~v~~~d~~~~~~~~~~~~~~~------------ 159 (391)
T 1l0q_A 102 DTTSNTVAGTVKTGKS----PLGLALSPDGKKLYVTNN------GDKTVSVINTVTKAVINTVSVGRS------------ 159 (391)
T ss_dssp ETTTTEEEEEEECSSS----EEEEEECTTSSEEEEEET------TTTEEEEEETTTTEEEEEEECCSS------------
T ss_pred ECCCCeEEEEEeCCCC----cceEEECCCCCEEEEEeC------CCCEEEEEECCCCcEEEEEecCCC------------
Confidence 9988754322211110 022222 4554433322 133899999988766443 32211
Q ss_pred eeeEE-eeCC-eEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEEe----cCCEEEEEe
Q 011826 331 DMNLG-VLGG-CLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLFC----KRRALVLYN 404 (476)
Q Consensus 331 ~~~L~-~~~G-~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~~----~~~~l~~yd 404 (476)
...+. .-+| .|++... .+..+.+|-+... .....+... ....-+.+..+|+.++.. .++.+..||
T Consensus 160 ~~~~~~~~dg~~l~~~~~-~~~~v~~~d~~~~------~~~~~~~~~--~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d 230 (391)
T 1l0q_A 160 PKGIAVTPDGTKVYVANF-DSMSISVIDTVTN------SVIDTVKVE--AAPSGIAVNPEGTKAYVTNVDKYFNTVSMID 230 (391)
T ss_dssp EEEEEECTTSSEEEEEET-TTTEEEEEETTTT------EEEEEEECS--SEEEEEEECTTSSEEEEEEECSSCCEEEEEE
T ss_pred cceEEECCCCCEEEEEeC-CCCEEEEEECCCC------eEEEEEecC--CCccceEECCCCCEEEEEecCcCCCcEEEEE
Confidence 11121 2234 4444443 4567888876532 223334332 122234566677655543 467899999
Q ss_pred CCCCcE
Q 011826 405 PVEKNT 410 (476)
Q Consensus 405 l~t~~~ 410 (476)
+++++.
T Consensus 231 ~~~~~~ 236 (391)
T 1l0q_A 231 TGTNKI 236 (391)
T ss_dssp TTTTEE
T ss_pred CCCCeE
Confidence 988764
No 37
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=85.47 E-value=23 Score=32.91 Aligned_cols=188 Identities=9% Similarity=0.075 Sum_probs=92.6
Q ss_pred CccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCCCceEEccCCCCCC
Q 011826 191 RNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGGAAWRKVGNAPWSP 270 (476)
Q Consensus 191 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t~~Wr~~~~~p~~~ 270 (476)
+..+.|||..+.....+-.... .......+.+.+..+.-.++....+ -.+.+|+..++.|..+.......
T Consensus 32 dg~i~iw~~~~~~~~~~~~~~~------h~~~v~~~~~~~~~~~~~l~s~~~d----g~v~iwd~~~~~~~~~~~~~~~~ 101 (379)
T 3jrp_A 32 DKTIKIFEVEGETHKLIDTLTG------HEGPVWRVDWAHPKFGTILASCSYD----GKVLIWKEENGRWSQIAVHAVHS 101 (379)
T ss_dssp TSCEEEEEEETTEEEEEEEECC------CSSCEEEEEECCGGGCSEEEEEETT----SCEEEEEEETTEEEEEEEECCCS
T ss_pred CCcEEEEecCCCcceeeeEecC------CCCcEEEEEeCCCCCCCEEEEeccC----CEEEEEEcCCCceeEeeeecCCC
Confidence 4568899887333222211110 0113455566543222233333322 46899999999887665322111
Q ss_pred ccCccceEEc----ceEEEEEeeccCCCCCcceEEEEECCCceE-EEEcCCCCCCCCCCccCCcceeeEEee--------
Q 011826 271 IAGLFPTYLN----GVIHWVCDDIEDDQSCSDCIVGFDFEDERF-CVIPAPPHFAEKPKTRDNLYDMNLGVL-------- 337 (476)
Q Consensus 271 ~~~~~~v~~~----G~lywl~~~~~~~~~~~~~Il~fD~~~e~f-~~i~lP~~~~~~~~~~~~~~~~~L~~~-------- 337 (476)
. ....+.++ |.+...+.. ...|..+|+.+..- ..+.+...... ...+.-.
T Consensus 102 ~-~v~~~~~~~~~~~~~l~~~~~-------d~~i~v~d~~~~~~~~~~~~~~~~~~---------v~~~~~~~~~~~~~~ 164 (379)
T 3jrp_A 102 A-SVNSVQWAPHEYGPLLLVASS-------DGKVSVVEFKENGTTSPIIIDAHAIG---------VNSASWAPATIEEDG 164 (379)
T ss_dssp S-CEEEEEECCGGGCSEEEEEET-------TSEEEEEECCTTSCCCEEEEECCTTC---------EEEEEECCCC-----
T ss_pred c-ceEEEEeCCCCCCCEEEEecC-------CCcEEEEecCCCCceeeEEecCCCCc---------eEEEEEcCccccccc
Confidence 0 01222222 333333322 23788888877522 11111111100 1111111
Q ss_pred ------CCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecC---CcEEEE-ecCCEEEEEeCCC
Q 011826 338 ------GGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDD---GSLLLF-CKRRALVLYNPVE 407 (476)
Q Consensus 338 ------~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~---g~il~~-~~~~~l~~ydl~t 407 (476)
+|.+.++.. .+..+.||-+.... ..|.....+... .....-+.+..+ +.+++. ..++.+..||+++
T Consensus 165 ~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~--~~~~~~~~~~~h-~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~ 240 (379)
T 3jrp_A 165 EHNGTKESRKFVTGG-ADNLVKIWKYNSDA--QTYVLESTLEGH-SDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN 240 (379)
T ss_dssp -----CTTCEEEEEE-TTSCEEEEEEETTT--TEEEEEEEECCC-SSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred cccCCCCCCEEEEEe-CCCeEEEEEecCCC--cceeeEEEEecc-cCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCC
Confidence 355554444 46789999987543 567666655432 122234455666 665554 4567889999887
Q ss_pred Cc
Q 011826 408 KN 409 (476)
Q Consensus 408 ~~ 409 (476)
..
T Consensus 241 ~~ 242 (379)
T 3jrp_A 241 EQ 242 (379)
T ss_dssp TT
T ss_pred CC
Confidence 63
No 38
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=84.83 E-value=34 Score=36.29 Aligned_cols=187 Identities=9% Similarity=0.073 Sum_probs=92.0
Q ss_pred CccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCCCceEEccCCCCCC
Q 011826 191 RNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGGAAWRKVGNAPWSP 270 (476)
Q Consensus 191 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t~~Wr~~~~~p~~~ 270 (476)
++.+.|||..++....+..... ......++.+.+..+.-.++....+ -.+.+|+..++.|..+.......
T Consensus 30 dg~I~vwd~~~~~~~~~~~l~~------h~~~V~~l~~s~~~~~~~l~s~s~D----g~I~vwd~~~~~~~~~~~~~~h~ 99 (753)
T 3jro_A 30 DKTIKIFEVEGETHKLIDTLTG------HEGPVWRVDWAHPKFGTILASCSYD----GKVLIWKEENGRWSQIAVHAVHS 99 (753)
T ss_dssp TTEEEEEEEETTEEEEEEEECC------CSSCEEEEEECCTTSCSEEEEEETT----SCEEEEEEETTEEEEEEEECCCS
T ss_pred CCcEEEEecCCCCCccceeccC------CcCceEEEEecCCCCCCEEEEEeCC----CeEEEEECCCCcccccccccCCC
Confidence 4568888877433322221110 0123456666654323333333333 46899999999886665322111
Q ss_pred ccCccceEEc----ceEEEEEeeccCCCCCcceEEEEECCCceEE-EEcCCCCCCCCCCccCCcceeeEEee--------
Q 011826 271 IAGLFPTYLN----GVIHWVCDDIEDDQSCSDCIVGFDFEDERFC-VIPAPPHFAEKPKTRDNLYDMNLGVL-------- 337 (476)
Q Consensus 271 ~~~~~~v~~~----G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~-~i~lP~~~~~~~~~~~~~~~~~L~~~-------- 337 (476)
. ....+.++ |.+...+.. ...|..+|+.+..-. .+.+...... ...+.-.
T Consensus 100 ~-~V~~v~~sp~~~~~~l~sgs~-------dg~I~vwdl~~~~~~~~~~~~~~~~~---------v~~l~~~p~~~~~~~ 162 (753)
T 3jro_A 100 A-SVNSVQWAPHEYGPLLLVASS-------DGKVSVVEFKENGTTSPIIIDAHAIG---------VNSASWAPATIEEDG 162 (753)
T ss_dssp S-CEEEEEECCGGGCSEEEEEET-------TSEEEEEECCSSSCCCCEEEECCSSC---------EEEEEECCCC-----
T ss_pred C-CeEEEEECCCCCCCEEEEEeC-------CCcEEEEEeecCCCcceeEeecCCCc---------eEEEEecCccccccc
Confidence 0 01222222 444333322 237888888765211 1111110000 1111111
Q ss_pred ------CCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecC---CcEEEE-ecCCEEEEEeCCC
Q 011826 338 ------GGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDD---GSLLLF-CKRRALVLYNPVE 407 (476)
Q Consensus 338 ------~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~---g~il~~-~~~~~l~~ydl~t 407 (476)
+|.+.++.. .+..+.||-+.... ..+.....+... .....-+.+..+ |.+++. ..++.+..||+++
T Consensus 163 ~~~~~~d~~~l~sgs-~dg~I~iwd~~~~~--~~~~~~~~~~~h-~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~ 238 (753)
T 3jro_A 163 EHNGTKESRKFVTGG-ADNLVKIWKYNSDA--QTYVLESTLEGH-SDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN 238 (753)
T ss_dssp ----CGGGCCEEEEE-TTSCEEEEEEETTT--TEEEEEEEECCC-SSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESS
T ss_pred ccccCCCCCEEEEEE-CCCeEEEEeccCCc--ccceeeeeecCC-CCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCC
Confidence 344444443 46789999987643 456666555431 222233455666 666555 4567889999887
Q ss_pred C
Q 011826 408 K 408 (476)
Q Consensus 408 ~ 408 (476)
+
T Consensus 239 ~ 239 (753)
T 3jro_A 239 E 239 (753)
T ss_dssp S
T ss_pred C
Confidence 5
No 39
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=84.37 E-value=28 Score=32.92 Aligned_cols=195 Identities=15% Similarity=0.131 Sum_probs=93.2
Q ss_pred EecccceEEEeecCCCccEEEEccccccee-ecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEE
Q 011826 176 VNSCNGFLCLRKPFHRNPCIICNPITGEYV-TIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYS 254 (476)
Q Consensus 176 ~~s~~GLlcl~~~~~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVys 254 (476)
....+|.|.+... +..++.+|+.|++.+ ..+.... ...... .+ +. +|+.. .. .-.+..|+
T Consensus 99 ~~~~~~~v~v~~~--~g~l~a~d~~tG~~~W~~~~~~~-----~~~~p~----~~---~~-~v~v~-~~---~g~l~~~d 159 (376)
T 3q7m_A 99 VTVSGGHVYIGSE--KAQVYALNTSDGTVAWQTKVAGE-----ALSRPV----VS---DG-LVLIH-TS---NGQLQALN 159 (376)
T ss_dssp EEEETTEEEEEET--TSEEEEEETTTCCEEEEEECSSC-----CCSCCE----EE---TT-EEEEE-CT---TSEEEEEE
T ss_pred ceEeCCEEEEEcC--CCEEEEEECCCCCEEEEEeCCCc-----eEcCCE----EE---CC-EEEEE-cC---CCeEEEEE
Confidence 4456777776653 357999999998843 2222111 000000 11 11 23322 21 13677888
Q ss_pred eCCCc--eEEccCCCCCCccC-ccceEEcceEEEEEeeccCCCCCcceEEEEECCCceE--EEE-cCCCCCCCCCCccCC
Q 011826 255 LGGAA--WRKVGNAPWSPIAG-LFPTYLNGVIHWVCDDIEDDQSCSDCIVGFDFEDERF--CVI-PAPPHFAEKPKTRDN 328 (476)
Q Consensus 255 s~t~~--Wr~~~~~p~~~~~~-~~~v~~~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f--~~i-~lP~~~~~~~~~~~~ 328 (476)
..+|. |+.....+...... ..++..+|.+|.-.. ...|.++|..+.+. +.- ..|......... .+
T Consensus 160 ~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~g~~--------~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~-~~ 230 (376)
T 3q7m_A 160 EADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVGGD--------NGRVSAVLMEQGQMIWQQRISQATGSTEIDRL-SD 230 (376)
T ss_dssp TTTCCEEEEEECCC-----CCCCCCEEETTEEEECCT--------TTEEEEEETTTCCEEEEEECCC------------C
T ss_pred CCCCcEEEEEeCCCCceeecCCCCcEEECCEEEEEcC--------CCEEEEEECCCCcEEEEEecccCCCCcccccc-cc
Confidence 87774 88665433222111 255666787665321 23899999876544 322 222211000000 00
Q ss_pred cceeeEEeeCCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEEecCCEEEEEeCCCC
Q 011826 329 LYDMNLGVLGGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLFCKRRALVLYNPVEK 408 (476)
Q Consensus 329 ~~~~~L~~~~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~~~~~~l~~ydl~t~ 408 (476)
........+|.+++... ...+..+-.+. + +..|... .. ....+ ...++.+++...++.++.+|.+++
T Consensus 231 -~~~~p~~~~~~v~~~~~--~g~l~~~d~~t-G-~~~w~~~----~~--~~~~~--~~~~~~l~~~~~~g~l~~~d~~tG 297 (376)
T 3q7m_A 231 -VDTTPVVVNGVVFALAY--NGNLTALDLRS-G-QIMWKRE----LG--SVNDF--IVDGNRIYLVDQNDRVMALTIDGG 297 (376)
T ss_dssp -CCCCCEEETTEEEEECT--TSCEEEEETTT-C-CEEEEEC----CC--CEEEE--EEETTEEEEEETTCCEEEEETTTC
T ss_pred -cCCCcEEECCEEEEEec--CcEEEEEECCC-C-cEEeecc----CC--CCCCc--eEECCEEEEEcCCCeEEEEECCCC
Confidence 01122334666666543 23333332221 2 3456542 11 11112 234567777777788999999988
Q ss_pred cEE
Q 011826 409 NTR 411 (476)
Q Consensus 409 ~~~ 411 (476)
+..
T Consensus 298 ~~~ 300 (376)
T 3q7m_A 298 VTL 300 (376)
T ss_dssp CEE
T ss_pred cEE
Confidence 754
No 40
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=84.37 E-value=25 Score=32.28 Aligned_cols=192 Identities=12% Similarity=0.034 Sum_probs=97.4
Q ss_pred cceEEEeecCCCccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCCCc
Q 011826 180 NGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGGAA 259 (476)
Q Consensus 180 ~GLlcl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t~~ 259 (476)
.+.+.+... .+..+.|||+.|++....-.... . .. ++.+++..+ .++.....+ ..+.+++..++.
T Consensus 9 ~~~~~v~~~-~~~~v~~~d~~~~~~~~~~~~~~-------~-~~-~~~~s~dg~--~l~~~~~~~---~~i~~~d~~~~~ 73 (331)
T 3u4y_A 9 SNFGIVVEQ-HLRRISFFSTDTLEILNQITLGY-------D-FV-DTAITSDCS--NVVVTSDFC---QTLVQIETQLEP 73 (331)
T ss_dssp CCEEEEEEG-GGTEEEEEETTTCCEEEEEECCC-------C-EE-EEEECSSSC--EEEEEESTT---CEEEEEECSSSS
T ss_pred CCEEEEEec-CCCeEEEEeCcccceeeeEEccC-------C-cc-eEEEcCCCC--EEEEEeCCC---CeEEEEECCCCc
Confidence 344444433 24578999999998754332211 1 22 677777543 233333322 478889988876
Q ss_pred e--EEccCCCCCCccCccceE--EcceEEEEEeeccCCCCCcceEEEEECCCceEEE-EcCCCCCCCCCCccCCcceeeE
Q 011826 260 W--RKVGNAPWSPIAGLFPTY--LNGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCV-IPAPPHFAEKPKTRDNLYDMNL 334 (476)
Q Consensus 260 W--r~~~~~p~~~~~~~~~v~--~~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~-i~lP~~~~~~~~~~~~~~~~~L 334 (476)
- +.+.... .+. .++. -+|...+.... ......|..+|+.+.+... ++.+.. ...+
T Consensus 74 ~~~~~~~~~~-~~~---~~~~~s~dg~~l~~~~~----~~~~~~i~v~d~~~~~~~~~~~~~~~------------~~~~ 133 (331)
T 3u4y_A 74 PKVVAIQEGQ-SSM---ADVDITPDDQFAVTVTG----LNHPFNMQSYSFLKNKFISTIPIPYD------------AVGI 133 (331)
T ss_dssp CEEEEEEECS-SCC---CCEEECTTSSEEEECCC----SSSSCEEEEEETTTTEEEEEEECCTT------------EEEE
T ss_pred eeEEecccCC-CCc---cceEECCCCCEEEEecC----CCCcccEEEEECCCCCeEEEEECCCC------------ccce
Confidence 4 2222111 010 1122 24543333322 1111279999998876543 333211 1112
Q ss_pred E-eeCC-eEEEEecCCCCC-eEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCc-EEEEe-cCCEEEEEeCCCCc
Q 011826 335 G-VLGG-CLSICDVTYFAP-PDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGS-LLLFC-KRRALVLYNPVEKN 409 (476)
Q Consensus 335 ~-~~~G-~L~~~~~~~~~~-l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~-il~~~-~~~~l~~ydl~t~~ 409 (476)
. .-+| .|++... .... +.+|.++..+. -.-.....+..+ ....-+.+..+|+ +++.. .++.+..||+++++
T Consensus 134 ~~spdg~~l~~~~~-~~~~~i~~~~~~~~g~-~~~~~~~~~~~~--~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 209 (331)
T 3u4y_A 134 AISPNGNGLILIDR-SSANTVRRFKIDADGV-LFDTGQEFISGG--TRPFNITFTPDGNFAFVANLIGNSIGILETQNPE 209 (331)
T ss_dssp EECTTSSCEEEEEE-TTTTEEEEEEECTTCC-EEEEEEEEECSS--SSEEEEEECTTSSEEEEEETTTTEEEEEECSSTT
T ss_pred EECCCCCEEEEEec-CCCceEEEEEECCCCc-EeecCCccccCC--CCccceEECCCCCEEEEEeCCCCeEEEEECCCCc
Confidence 2 2245 4666665 4466 99999986441 111111223221 1123455677887 44444 35789999999877
Q ss_pred E
Q 011826 410 T 410 (476)
Q Consensus 410 ~ 410 (476)
.
T Consensus 210 ~ 210 (331)
T 3u4y_A 210 N 210 (331)
T ss_dssp S
T ss_pred c
Confidence 4
No 41
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=82.57 E-value=20 Score=34.84 Aligned_cols=185 Identities=10% Similarity=0.065 Sum_probs=87.7
Q ss_pred CccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCCCceEEccCCCCCC
Q 011826 191 RNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGGAAWRKVGNAPWSP 270 (476)
Q Consensus 191 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t~~Wr~~~~~p~~~ 270 (476)
++.+.|||..+++...+-.... ......++.|.|..+.+ ++. ...+ -.+.+++..++.-+.+.......
T Consensus 141 dg~i~lWd~~~~~~~~~~~~~g------H~~~V~~l~f~p~~~~~-l~s-~s~D---~~v~iwd~~~~~~~~~~~~~~~~ 209 (435)
T 4e54_B 141 GGDIMLWNFGIKDKPTFIKGIG------AGGSITGLKFNPLNTNQ-FYA-SSME---GTTRLQDFKGNILRVFASSDTIN 209 (435)
T ss_dssp TSCEEEECSSCCSCCEEECCCS------SSCCCCEEEECSSCTTE-EEE-ECSS---SCEEEEETTSCEEEEEECCSSCS
T ss_pred CCEEEEEECCCCCceeEEEccC------CCCCEEEEEEeCCCCCE-EEE-EeCC---CEEEEeeccCCceeEEeccCCCC
Confidence 4579999998887543322110 01234556677654443 222 2222 36788888877655443221111
Q ss_pred ccCccceE--EcceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCcceeeEEee-CCe-EEEEec
Q 011826 271 IAGLFPTY--LNGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMNLGVL-GGC-LSICDV 346 (476)
Q Consensus 271 ~~~~~~v~--~~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~~~L~~~-~G~-L~~~~~ 346 (476)
.. ..++. -+|.+...+.. ...|..+|+.++....+... . .....+.-. .|. +.+...
T Consensus 210 ~~-~~~~~~~~~~~~l~~g~~-------dg~i~~wd~~~~~~~~~~~h-----~------~~v~~v~~~p~~~~~~~s~s 270 (435)
T 4e54_B 210 IW-FCSLDVSASSRMVVTGDN-------VGNVILLNMDGKELWNLRMH-----K------KKVTHVALNPCCDWFLATAS 270 (435)
T ss_dssp CC-CCCEEEETTTTEEEEECS-------SSBEEEEESSSCBCCCSBCC-----S------SCEEEEEECTTCSSEEEEEE
T ss_pred cc-EEEEEECCCCCEEEEEeC-------CCcEeeeccCcceeEEEecc-----c------ceEEeeeecCCCceEEEEec
Confidence 10 12222 24444333322 23788899876543222111 0 001122211 233 333333
Q ss_pred CCCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEE-ecCCEEEEEeCCCCcE
Q 011826 347 TYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLF-CKRRALVLYNPVEKNT 410 (476)
Q Consensus 347 ~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~-~~~~~l~~ydl~t~~~ 410 (476)
.+..+.||-+........... ..++.....-+.+..+|..|+. ..++.+..||+++...
T Consensus 271 -~d~~v~iwd~~~~~~~~~~~~----~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~ 330 (435)
T 4e54_B 271 -VDQTVKIWDLRQVRGKASFLY----SLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDC 330 (435)
T ss_dssp -TTSBCCEEETTTCCSSSCCSB----CCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSS
T ss_pred -CcceeeEEecccccccceEEE----eeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCcc
Confidence 567899998764331111110 0011111122344567765554 4567899999987654
No 42
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=82.47 E-value=27 Score=31.28 Aligned_cols=198 Identities=8% Similarity=-0.042 Sum_probs=100.1
Q ss_pred EEecccceEEEeecCCCccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEE
Q 011826 175 IVNSCNGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYS 254 (476)
Q Consensus 175 ~~~s~~GLlcl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVys 254 (476)
+....+|-+.+... ....++++||. ++...+..+.. .....++.+|+.. ++...... ...+.+|+
T Consensus 62 i~~~~~g~l~v~~~-~~~~i~~~~~~-g~~~~~~~~~~-------~~~~~~i~~~~~g---~l~v~~~~---~~~i~~~d 126 (299)
T 2z2n_A 62 LTISSDGEVWFTEN-AANKIGRITKK-GIIKEYTLPNP-------DSAPYGITEGPNG---DIWFTEMN---GNRIGRIT 126 (299)
T ss_dssp EEECTTSCEEEEET-TTTEEEEECTT-SCEEEEECSST-------TCCEEEEEECTTS---CEEEEETT---TTEEEEEC
T ss_pred EEECCCCCEEEeCC-CCCeEEEECCC-CcEEEEeCCCc-------CCCceeeEECCCC---CEEEEecC---CceEEEEC
Confidence 44445676666553 23468999986 55544432211 1134566777632 23322211 23566777
Q ss_pred eCCCceEEccCCCCCCccCccceEE--cceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCccee
Q 011826 255 LGGAAWRKVGNAPWSPIAGLFPTYL--NGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDM 332 (476)
Q Consensus 255 s~t~~Wr~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~~ 332 (476)
. ++....+..+.... ...++.+ +|.+|..... ...|..+|. +.++..+.+|..... ..
T Consensus 127 ~-~g~~~~~~~~~~~~--~~~~i~~~~~g~l~v~~~~-------~~~i~~~~~-~g~~~~~~~~~~~~~---------~~ 186 (299)
T 2z2n_A 127 D-DGKIREYELPNKGS--YPSFITLGSDNALWFTENQ-------NNAIGRITE-SGDITEFKIPTPASG---------PV 186 (299)
T ss_dssp T-TCCEEEEECSSTTC--CEEEEEECTTSCEEEEETT-------TTEEEEECT-TCCEEEEECSSTTCC---------EE
T ss_pred C-CCCEEEecCCCCCC--CCceEEEcCCCCEEEEeCC-------CCEEEEEcC-CCcEEEeeCCCCCCc---------ce
Confidence 6 66555443221111 1133433 4666654422 238999999 777777766643221 22
Q ss_pred eEEe-eCCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEEe-cCCEEEEEeCCCCcE
Q 011826 333 NLGV-LGGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLFC-KRRALVLYNPVEKNT 410 (476)
Q Consensus 333 ~L~~-~~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~~-~~~~l~~ydl~t~~~ 410 (476)
.+.. -+|.|++... ....+.+|-. .+ .... +.++. ......-+.+..+|.+++.. ..+.+..||+ ++++
T Consensus 187 ~i~~~~~g~l~v~~~-~~~~i~~~~~--~g---~~~~-~~~~~-~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~ 257 (299)
T 2z2n_A 187 GITKGNDDALWFVEI-IGNKIGRITT--SG---EITE-FKIPT-PNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNII 257 (299)
T ss_dssp EEEECTTSSEEEEET-TTTEEEEECT--TC---CEEE-EECSS-TTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEE
T ss_pred eEEECCCCCEEEEcc-CCceEEEECC--CC---cEEE-EECCC-CCCCceeEEECCCCCEEEeccCCceEEEECC-CCce
Confidence 2332 3578877764 2334444433 22 2322 22221 11111234455677877766 4578999999 4566
Q ss_pred EEEEEe
Q 011826 411 RYLLIH 416 (476)
Q Consensus 411 ~~v~i~ 416 (476)
..+.+.
T Consensus 258 ~~~~~~ 263 (299)
T 2z2n_A 258 EEYPIQ 263 (299)
T ss_dssp EEEECS
T ss_pred EEEeCC
Confidence 655443
No 43
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=81.18 E-value=29 Score=30.71 Aligned_cols=186 Identities=14% Similarity=0.051 Sum_probs=92.8
Q ss_pred CccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCC-CceEEccCCCCC
Q 011826 191 RNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGG-AAWRKVGNAPWS 269 (476)
Q Consensus 191 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t-~~Wr~~~~~p~~ 269 (476)
+..+++||+.+++...+..... ...++.++|.. .+-++ ..+ ..+.+++..+ +....+......
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~~~---------~v~~~~~spdg-~~l~~--~~~----~~i~~~d~~~~~~~~~~~~~~~~ 84 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQTPE---------LFEAPNWSPDG-KYLLL--NSE----GLLYRLSLAGDPSPEKVDTGFAT 84 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEESS---------CCEEEEECTTS-SEEEE--EET----TEEEEEESSSCCSCEECCCTTCC
T ss_pred ceeEEEEeCCCCceeeeccCCc---------ceEeeEECCCC-CEEEE--EcC----CeEEEEeCCCCCCceEecccccc
Confidence 4579999999998776654221 23456666643 33222 222 3788999988 877665532211
Q ss_pred CccCccceEEcceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCcceeeEEeeCCe-EEEEecCC
Q 011826 270 PIAGLFPTYLNGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMNLGVLGGC-LSICDVTY 348 (476)
Q Consensus 270 ~~~~~~~v~~~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~~~L~~~~G~-L~~~~~~~ 348 (476)
.........-+|........ .......|..+|+.+.....+...... ....+ .-+|. |.+... .
T Consensus 85 ~~~~~~~~spdg~~l~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~----------~~~~~-spdg~~l~~~~~-~ 149 (297)
T 2ojh_A 85 ICNNDHGISPDGALYAISDK---VEFGKSAIYLLPSTGGTPRLMTKNLPS----------YWHGW-SPDGKSFTYCGI-R 149 (297)
T ss_dssp CBCSCCEECTTSSEEEEEEC---TTTSSCEEEEEETTCCCCEECCSSSSE----------EEEEE-CTTSSEEEEEEE-E
T ss_pred ccccceEECCCCCEEEEEEe---CCCCcceEEEEECCCCceEEeecCCCc----------cceEE-CCCCCEEEEEEC-C
Confidence 11100111224554433332 111233788889877765554332210 01111 12344 443433 3
Q ss_pred CCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEE-Eec---CCEEEEEeCCCCcEEEE
Q 011826 349 FAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLL-FCK---RRALVLYNPVEKNTRYL 413 (476)
Q Consensus 349 ~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~-~~~---~~~l~~ydl~t~~~~~v 413 (476)
+..+.||.++..+ .... .+... ......+.+..+|+.++ ... ...++.+++.++..+.+
T Consensus 150 ~~~~~l~~~~~~~--~~~~---~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~ 212 (297)
T 2ojh_A 150 DQVFDIYSMDIDS--GVET---RLTHG-EGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERI 212 (297)
T ss_dssp TTEEEEEEEETTT--CCEE---ECCCS-SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEEC
T ss_pred CCceEEEEEECCC--Ccce---EcccC-CCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEE
Confidence 5668999986433 1111 12111 11123344566776444 332 24677777777766554
No 44
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=80.73 E-value=37 Score=31.66 Aligned_cols=193 Identities=6% Similarity=-0.094 Sum_probs=99.9
Q ss_pred ccceEEEeecCCCccEEEEcccccce-eecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCC
Q 011826 179 CNGFLCLRKPFHRNPCIICNPITGEY-VTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGG 257 (476)
Q Consensus 179 ~~GLlcl~~~~~~~~~~V~NP~T~~~-~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t 257 (476)
.++.+.+... ..+.+.|+|+.|++. ..+|... ...++.+++. . ++++.... ...+.+++..+
T Consensus 52 ~~~~lyv~~~-~~~~v~viD~~t~~~~~~i~~~~----------~p~~i~~~~~--g-~lyv~~~~---~~~v~~iD~~t 114 (328)
T 3dsm_A 52 RDGIGWIVVN-NSHVIFAIDINTFKEVGRITGFT----------SPRYIHFLSD--E-KAYVTQIW---DYRIFIINPKT 114 (328)
T ss_dssp ETTEEEEEEG-GGTEEEEEETTTCCEEEEEECCS----------SEEEEEEEET--T-EEEEEEBS---CSEEEEEETTT
T ss_pred ECCEEEEEEc-CCCEEEEEECcccEEEEEcCCCC----------CCcEEEEeCC--C-eEEEEECC---CCeEEEEECCC
Confidence 3555555443 235799999999887 5565321 2344555443 3 56555422 24788899888
Q ss_pred CceE-EccCCCCCC-ccCccce-EEcceEEEEEeeccCCCCCcceEEEEECCCceEE-EEcCCCCCCCCCCccCCcceee
Q 011826 258 AAWR-KVGNAPWSP-IAGLFPT-YLNGVIHWVCDDIEDDQSCSDCIVGFDFEDERFC-VIPAPPHFAEKPKTRDNLYDMN 333 (476)
Q Consensus 258 ~~Wr-~~~~~p~~~-~~~~~~v-~~~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~-~i~lP~~~~~~~~~~~~~~~~~ 333 (476)
++-. .+....... .....++ ..+|.+|-.... ....|..+|+.+.+.. .++...... .+
T Consensus 115 ~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~------~~~~v~viD~~t~~~~~~i~~g~~p~----------~i- 177 (328)
T 3dsm_A 115 YEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWS------YQNRILKIDTETDKVVDELTIGIQPT----------SL- 177 (328)
T ss_dssp TEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECT------TCCEEEEEETTTTEEEEEEECSSCBC----------CC-
T ss_pred CeEEEEEEcCCccccCCCcceEEEECCEEEEEcCC------CCCEEEEEECCCCeEEEEEEcCCCcc----------ce-
Confidence 7533 222211000 0011233 345566554321 1338999999987764 455432211 11
Q ss_pred EEeeCCeEEEEecCCCC-------CeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEEecCCEEEEEeCC
Q 011826 334 LGVLGGCLSICDVTYFA-------PPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLFCKRRALVLYNPV 406 (476)
Q Consensus 334 L~~~~G~L~~~~~~~~~-------~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~~~~~~l~~ydl~ 406 (476)
...-+|+|+++...... .-.|++++... ..- ..++....-....-+.+..+|+.++..+. .++.+|++
T Consensus 178 ~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t--~~v--~~~~~~~~g~~p~~la~~~d~~~lyv~~~-~v~~~d~~ 252 (328)
T 3dsm_A 178 VMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAET--FTV--EKQFKFKLGDWPSEVQLNGTRDTLYWINN-DIWRMPVE 252 (328)
T ss_dssp EECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTT--TEE--EEEEECCTTCCCEEEEECTTSCEEEEESS-SEEEEETT
T ss_pred EEcCCCCEEEEECCCccCCccccCCceEEEEECCC--CeE--EEEEecCCCCCceeEEEecCCCEEEEEcc-EEEEEECC
Confidence 12335788777652110 13455555322 222 22344321111233556666776666555 89999999
Q ss_pred CCcE
Q 011826 407 EKNT 410 (476)
Q Consensus 407 t~~~ 410 (476)
++++
T Consensus 253 t~~~ 256 (328)
T 3dsm_A 253 ADRV 256 (328)
T ss_dssp CSSC
T ss_pred CCce
Confidence 8875
No 45
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=80.59 E-value=26 Score=32.91 Aligned_cols=187 Identities=12% Similarity=0.066 Sum_probs=81.5
Q ss_pred CccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCCCc-eEEccCCCCC
Q 011826 191 RNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGGAA-WRKVGNAPWS 269 (476)
Q Consensus 191 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t~~-Wr~~~~~p~~ 269 (476)
+..+.|||..++++..+-.... .......+.+.+.. .+ ++....+ ..+.+|+..++. |.........
T Consensus 32 d~~i~iw~~~~~~~~~~~~~~~------h~~~v~~~~~s~~~-~~--l~s~s~d---~~v~vwd~~~~~~~~~~~~~~~~ 99 (377)
T 3dwl_C 32 TNQVELYEQDGNGWKHARTFSD------HDKIVTCVDWAPKS-NR--IVTCSQD---RNAYVYEKRPDGTWKQTLVLLRL 99 (377)
T ss_dssp SSCBCEEEEETTEEEECCCBCC------CSSCEEEEEECTTT-CC--EEEEETT---SSEEEC------CCCCEEECCCC
T ss_pred CCEEEEEEccCCceEEEEEEec------CCceEEEEEEeCCC-CE--EEEEeCC---CeEEEEEcCCCCceeeeeEeccc
Confidence 4568899999875433332211 11234566676653 22 2333322 368888888776 5443321110
Q ss_pred CccCccceEE--cceEEEEEeeccCCCCCcceEEEEECCCce----EEEEcCCCCCCCCCCccCCcceeeEEee-CCeEE
Q 011826 270 PIAGLFPTYL--NGVIHWVCDDIEDDQSCSDCIVGFDFEDER----FCVIPAPPHFAEKPKTRDNLYDMNLGVL-GGCLS 342 (476)
Q Consensus 270 ~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~Il~fD~~~e~----f~~i~lP~~~~~~~~~~~~~~~~~L~~~-~G~L~ 342 (476)
.. ....+.+ +|.+...+.. ...|..+|+.+.+ ...+..|.... ...+.-. +|.+.
T Consensus 100 ~~-~v~~~~~~~~~~~l~~~~~-------d~~i~iwd~~~~~~~~~~~~~~~~h~~~----------v~~~~~~~~~~~l 161 (377)
T 3dwl_C 100 NR-AATFVRWSPNEDKFAVGSG-------ARVISVCYFEQENDWWVSKHLKRPLRST----------ILSLDWHPNNVLL 161 (377)
T ss_dssp SS-CEEEEECCTTSSCCEEEES-------SSCEEECCC-----CCCCEEECSSCCSC----------EEEEEECTTSSEE
T ss_pred CC-ceEEEEECCCCCEEEEEec-------CCeEEEEEECCcccceeeeEeecccCCC----------eEEEEEcCCCCEE
Confidence 00 0011111 3433222221 2268888887765 33343321110 1122222 34444
Q ss_pred EEecCCCCCeEEEeeccCCC-----Ccce-------EEEEEEeCCCcceeeEEEEecCCcEEEE-ecCCEEEEEeCCCCc
Q 011826 343 ICDVTYFAPPDIWVMKDYGV-----QESW-------IKQLSVDNGYFGICRPIKYLDDGSLLLF-CKRRALVLYNPVEKN 409 (476)
Q Consensus 343 ~~~~~~~~~l~IWvl~~~~~-----~~~W-------~~~~~I~~~~~~~~~p~~~~~~g~il~~-~~~~~l~~ydl~t~~ 409 (476)
++.. .+..+.||-+...+. ...| .....+ .......-+.+..+|++++. ..++.+..||+++++
T Consensus 162 ~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~ 238 (377)
T 3dwl_C 162 AAGC-ADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY--PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPE 238 (377)
T ss_dssp EEEE-SSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC--CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTT
T ss_pred EEEe-CCCEEEEEEEEecccCCCccccccccccchhhhhhcc--cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCC
Confidence 4433 467899999853211 1122 222222 22222234556677765554 567789999998776
Q ss_pred E
Q 011826 410 T 410 (476)
Q Consensus 410 ~ 410 (476)
.
T Consensus 239 ~ 239 (377)
T 3dwl_C 239 Q 239 (377)
T ss_dssp S
T ss_pred C
Confidence 4
No 46
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=80.39 E-value=40 Score=31.84 Aligned_cols=134 Identities=13% Similarity=0.102 Sum_probs=70.7
Q ss_pred EEEEEEeCCC--ceEEccCCCCCC-------ccCccceEEcceEEEEEeeccCCCCCcceEEEEECCCceEEEE-cCCCC
Q 011826 249 TAEIYSLGGA--AWRKVGNAPWSP-------IAGLFPTYLNGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVI-PAPPH 318 (476)
Q Consensus 249 ~~eVyss~t~--~Wr~~~~~p~~~-------~~~~~~v~~~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i-~lP~~ 318 (476)
.+..|+..+| .|+.....+... .....++..+|.+|..... ..|.++|..+.+...- +.+.
T Consensus 199 ~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~--------g~l~~~d~~tG~~~w~~~~~~- 269 (376)
T 3q7m_A 199 RVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYN--------GNLTALDLRSGQIMWKRELGS- 269 (376)
T ss_dssp EEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTT--------SCEEEEETTTCCEEEEECCCC-
T ss_pred EEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecC--------cEEEEEECCCCcEEeeccCCC-
Confidence 5677777766 577544322110 0112567778888775432 2799999876644322 2211
Q ss_pred CCCCCCccCCcceeeEEeeCCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEEecCC
Q 011826 319 FAEKPKTRDNLYDMNLGVLGGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLFCKRR 398 (476)
Q Consensus 319 ~~~~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~~~~~ 398 (476)
...+...+|.|++... ...+ +.++....+..|... .........|+ ..++.|++...++
T Consensus 270 ------------~~~~~~~~~~l~~~~~--~g~l--~~~d~~tG~~~w~~~---~~~~~~~~~~~--~~~~~l~v~~~~g 328 (376)
T 3q7m_A 270 ------------VNDFIVDGNRIYLVDQ--NDRV--MALTIDGGVTLWTQS---DLLHRLLTSPV--LYNGNLVVGDSEG 328 (376)
T ss_dssp ------------EEEEEEETTEEEEEET--TCCE--EEEETTTCCEEEEEC---TTTTSCCCCCE--EETTEEEEECTTS
T ss_pred ------------CCCceEECCEEEEEcC--CCeE--EEEECCCCcEEEeec---ccCCCcccCCE--EECCEEEEEeCCC
Confidence 2234455777777654 2333 333322113456532 01111112233 2356777777778
Q ss_pred EEEEEeCCCCcEEE
Q 011826 399 ALVLYNPVEKNTRY 412 (476)
Q Consensus 399 ~l~~ydl~t~~~~~ 412 (476)
.++.+|.+++++.-
T Consensus 329 ~l~~~d~~tG~~~~ 342 (376)
T 3q7m_A 329 YLHWINVEDGRFVA 342 (376)
T ss_dssp EEEEEETTTCCEEE
T ss_pred eEEEEECCCCcEEE
Confidence 89999999987643
No 47
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=79.35 E-value=44 Score=31.81 Aligned_cols=180 Identities=12% Similarity=0.081 Sum_probs=92.3
Q ss_pred CccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCCCceEEccCCCCCC
Q 011826 191 RNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGGAAWRKVGNAPWSP 270 (476)
Q Consensus 191 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t~~Wr~~~~~p~~~ 270 (476)
++.+.|||..+++...+-.... ......+.+.+. +.+ +.+...+ -.+.+|+..++.-...-.....
T Consensus 112 d~~v~lw~~~~~~~~~~~~~~~-------~~~v~~v~~s~~-~~~--l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~- 177 (401)
T 4aez_A 112 ERNVYVWNADSGSVSALAETDE-------STYVASVKWSHD-GSF--LSVGLGN---GLVDIYDVESQTKLRTMAGHQA- 177 (401)
T ss_dssp TTEEEEEETTTCCEEEEEECCT-------TCCEEEEEECTT-SSE--EEEEETT---SCEEEEETTTCCEEEEECCCSS-
T ss_pred CCeEEEeeCCCCcEeEeeecCC-------CCCEEEEEECCC-CCE--EEEECCC---CeEEEEECcCCeEEEEecCCCC-
Confidence 4579999999998765544321 123456677663 333 3333322 3688999887753222111101
Q ss_pred ccCccceEEcceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCcceeeEEee-CCeEEEEecCCC
Q 011826 271 IAGLFPTYLNGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMNLGVL-GGCLSICDVTYF 349 (476)
Q Consensus 271 ~~~~~~v~~~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~~~L~~~-~G~L~~~~~~~~ 349 (476)
....+.++|.+...+.. ...|..+|+....-....+...... ...+.-. +|.+.++.. .+
T Consensus 178 --~v~~~~~~~~~l~~~~~-------dg~i~i~d~~~~~~~~~~~~~~~~~---------v~~~~~~~~~~~l~s~~-~d 238 (401)
T 4aez_A 178 --RVGCLSWNRHVLSSGSR-------SGAIHHHDVRIANHQIGTLQGHSSE---------VCGLAWRSDGLQLASGG-ND 238 (401)
T ss_dssp --CEEEEEEETTEEEEEET-------TSEEEEEETTSSSCEEEEEECCSSC---------EEEEEECTTSSEEEEEE-TT
T ss_pred --ceEEEEECCCEEEEEcC-------CCCEEEEecccCcceeeEEcCCCCC---------eeEEEEcCCCCEEEEEe-CC
Confidence 11345556664444432 3389999997433222111111110 1112221 454444443 46
Q ss_pred CCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCC-cEEEEe---cCCEEEEEeCCCCcE
Q 011826 350 APPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDG-SLLLFC---KRRALVLYNPVEKNT 410 (476)
Q Consensus 350 ~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g-~il~~~---~~~~l~~ydl~t~~~ 410 (476)
..+.||-+.... ....+.. ......-+.+..++ .++... .++.+..||+++++.
T Consensus 239 ~~v~iwd~~~~~------~~~~~~~-~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~ 296 (401)
T 4aez_A 239 NVVQIWDARSSI------PKFTKTN-HNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGAR 296 (401)
T ss_dssp SCEEEEETTCSS------EEEEECC-CSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCE
T ss_pred CeEEEccCCCCC------ccEEecC-CcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCE
Confidence 789999886422 1222221 11222345556655 555554 368899999987764
No 48
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=79.14 E-value=33 Score=30.25 Aligned_cols=201 Identities=11% Similarity=-0.062 Sum_probs=95.7
Q ss_pred ecccceEEEeecCCCccEEEEcccc-cceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEe
Q 011826 177 NSCNGFLCLRKPFHRNPCIICNPIT-GEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSL 255 (476)
Q Consensus 177 ~s~~GLlcl~~~~~~~~~~V~NP~T-~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss 255 (476)
-+-+|-.++... ...+++||..+ ++...+..... ......+.+.|.. . .++...........+.+++.
T Consensus 49 ~spdg~~l~~~~--~~~i~~~d~~~~~~~~~~~~~~~-------~~~~~~~~~spdg-~-~l~~~~~~~~~~~~l~~~~~ 117 (297)
T 2ojh_A 49 WSPDGKYLLLNS--EGLLYRLSLAGDPSPEKVDTGFA-------TICNNDHGISPDG-A-LYAISDKVEFGKSAIYLLPS 117 (297)
T ss_dssp ECTTSSEEEEEE--TTEEEEEESSSCCSCEECCCTTC-------CCBCSCCEECTTS-S-EEEEEECTTTSSCEEEEEET
T ss_pred ECCCCCEEEEEc--CCeEEEEeCCCCCCceEeccccc-------cccccceEECCCC-C-EEEEEEeCCCCcceEEEEEC
Confidence 344554333332 34799999999 88776664321 0112234444432 2 23333222222456677777
Q ss_pred CCCceEEccCCCCCCccCccceEEcce-EEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCcceeeE
Q 011826 256 GGAAWRKVGNAPWSPIAGLFPTYLNGV-IHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMNL 334 (476)
Q Consensus 256 ~t~~Wr~~~~~p~~~~~~~~~v~~~G~-lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~~~L 334 (476)
.++.-+.+..... .. .....-+|. +++.... .....|..+|+.+.....+...... ...+
T Consensus 118 ~~~~~~~~~~~~~--~~-~~~~spdg~~l~~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~~-----------~~~~ 178 (297)
T 2ojh_A 118 TGGTPRLMTKNLP--SY-WHGWSPDGKSFTYCGIR-----DQVFDIYSMDIDSGVETRLTHGEGR-----------NDGP 178 (297)
T ss_dssp TCCCCEECCSSSS--EE-EEEECTTSSEEEEEEEE-----TTEEEEEEEETTTCCEEECCCSSSC-----------EEEE
T ss_pred CCCceEEeecCCC--cc-ceEECCCCCEEEEEECC-----CCceEEEEEECCCCcceEcccCCCc-----------cccc
Confidence 7766555443221 00 011111454 3333332 1222577777776665544322110 1111
Q ss_pred E-eeCCe-EEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEE-ecC-----------CEE
Q 011826 335 G-VLGGC-LSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLF-CKR-----------RAL 400 (476)
Q Consensus 335 ~-~~~G~-L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~-~~~-----------~~l 400 (476)
. .-+|. |.+... .+..+.||.++..+ .... .+... ......+.+..+|+.++. ..+ ..+
T Consensus 179 ~~s~dg~~l~~~~~-~~~~~~i~~~~~~~--~~~~---~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l 251 (297)
T 2ojh_A 179 DYSPDGRWIYFNSS-RTGQMQIWRVRVDG--SSVE---RITDS-AYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRV 251 (297)
T ss_dssp EECTTSSEEEEEEC-TTSSCEEEEEETTS--SCEE---ECCCC-SEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEE
T ss_pred eECCCCCEEEEEec-CCCCccEEEECCCC--CCcE---EEecC-CcccCCeEECCCCCEEEEEEcCCCCCcccccCceEE
Confidence 1 22454 444433 45679999997433 1111 22211 112233456677865443 322 469
Q ss_pred EEEeCCCCcEEEEE
Q 011826 401 VLYNPVEKNTRYLL 414 (476)
Q Consensus 401 ~~ydl~t~~~~~v~ 414 (476)
+.+|+++++.+.+.
T Consensus 252 ~~~d~~~~~~~~~~ 265 (297)
T 2ojh_A 252 QLMDMDGGNVETLF 265 (297)
T ss_dssp EEEETTSCSCEEEE
T ss_pred EEEecCCCCceeee
Confidence 99999988766554
No 49
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=78.73 E-value=38 Score=30.64 Aligned_cols=199 Identities=9% Similarity=-0.084 Sum_probs=93.5
Q ss_pred EEecccceEEEeecCCCccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEE---c--------
Q 011826 175 IVNSCNGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVF---D-------- 243 (476)
Q Consensus 175 ~~~s~~GLlcl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~---~-------- 243 (476)
+.-+.+|-+.+... ....+.++||.|++...+..... . ........+.+|+.. . ++.... .
T Consensus 74 l~~~~dg~l~v~~~-~~~~i~~~d~~~g~~~~~~~~~~-~---~~~~~~~~i~~d~~G-~--l~vtd~~~g~~~~~~~~~ 145 (296)
T 3e5z_A 74 HCLNKQGHLIACSH-GLRRLERQREPGGEWESIADSFE-G---KKLNSPNDVCLAPDG-S--LWFSDPTYGIDKPEEGYG 145 (296)
T ss_dssp EEECTTCCEEEEET-TTTEEEEECSTTCCEEEEECEET-T---EECCCCCCEEECTTS-C--EEEEECSHHHHCGGGSSC
T ss_pred eeECCCCcEEEEec-CCCeEEEEcCCCCcEEEEeeccC-C---CCCCCCCCEEECCCC-C--EEEECCcccccccccccc
Confidence 44445776655553 23579999999998876643211 0 001112335556532 2 222110 0
Q ss_pred ---CccccEEEEEEeCCCceEEccCCCCCCccCccceEE--cceEEEEEeeccCCCCCcceEEEEECC-CceE-EEEcCC
Q 011826 244 ---DFLNRTAEIYSLGGAAWRKVGNAPWSPIAGLFPTYL--NGVIHWVCDDIEDDQSCSDCIVGFDFE-DERF-CVIPAP 316 (476)
Q Consensus 244 ---~~~~~~~eVyss~t~~Wr~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~Il~fD~~-~e~f-~~i~lP 316 (476)
+.....+..|+.. +.-+.+......+ .++.+ +|.++ ++.. ....|..||+. +.++ .....-
T Consensus 146 ~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~----~gi~~s~dg~~l-v~~~------~~~~i~~~~~~~~g~~~~~~~~~ 213 (296)
T 3e5z_A 146 GEMELPGRWVFRLAPD-GTLSAPIRDRVKP----NGLAFLPSGNLL-VSDT------GDNATHRYCLNARGETEYQGVHF 213 (296)
T ss_dssp CCCCSSSCEEEEECTT-SCEEEEECCCSSE----EEEEECTTSCEE-EEET------TTTEEEEEEECSSSCEEEEEEEE
T ss_pred ccccCCCcEEEEECCC-CCEEEeecCCCCC----ccEEECCCCCEE-EEeC------CCCeEEEEEECCCCcCcCCCeEe
Confidence 0001234444443 4444332211111 33443 57666 4432 23389999986 4555 111100
Q ss_pred CCCCCCCCccCCcceeeEEeeCCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEE-ecCCcEEEEe
Q 011826 317 PHFAEKPKTRDNLYDMNLGVLGGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKY-LDDGSLLLFC 395 (476)
Q Consensus 317 ~~~~~~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~-~~~g~il~~~ 395 (476)
......+ ......-+|.|.++. ...+.+|-.+ + .-. ..+..... ..-+.+ ..+++.|+..
T Consensus 214 ~~~~~~p-------~~i~~d~~G~l~v~~---~~~v~~~~~~--g---~~~--~~~~~~~~--~~~~~f~~~d~~~L~v~ 274 (296)
T 3e5z_A 214 TVEPGKT-------DGLRVDAGGLIWASA---GDGVHVLTPD--G---DEL--GRVLTPQT--TSNLCFGGPEGRTLYMT 274 (296)
T ss_dssp CCSSSCC-------CSEEEBTTSCEEEEE---TTEEEEECTT--S---CEE--EEEECSSC--CCEEEEESTTSCEEEEE
T ss_pred eCCCCCC-------CeEEECCCCCEEEEc---CCeEEEECCC--C---CEE--EEEECCCC--ceeEEEECCCCCEEEEE
Confidence 1111110 111223467777776 3445555432 2 122 23333211 122334 3566666666
Q ss_pred cCCEEEEEeCCCCcEEE
Q 011826 396 KRRALVLYNPVEKNTRY 412 (476)
Q Consensus 396 ~~~~l~~ydl~t~~~~~ 412 (476)
....++.++++++++++
T Consensus 275 t~~~l~~~~~~~~~~~~ 291 (296)
T 3e5z_A 275 VSTEFWSIETNVRGLEH 291 (296)
T ss_dssp ETTEEEEEECSCCBCCC
T ss_pred cCCeEEEEEcccccccc
Confidence 66899999999998754
No 50
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=77.27 E-value=54 Score=31.67 Aligned_cols=184 Identities=10% Similarity=0.078 Sum_probs=96.1
Q ss_pred ccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCCCceEEccCCCCCCc
Q 011826 192 NPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGGAAWRKVGNAPWSPI 271 (476)
Q Consensus 192 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t~~Wr~~~~~p~~~~ 271 (476)
..+.+||..+++.+.|.... .....+.+.|.. . +|+.... +.+...+.+++..++..+.+...+..
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~---------~~v~~~~~Spdg-~-~la~~s~-~~~~~~i~~~d~~tg~~~~l~~~~~~-- 224 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSP---------QPLMSPAWSPDG-S-KLAYVTF-ESGRSALVIQTLANGAVRQVASFPRH-- 224 (415)
T ss_dssp EEEEEEETTSCSCEEEEEES---------SCEEEEEECTTS-S-EEEEEEC-TTSSCEEEEEETTTCCEEEEECCSSC--
T ss_pred ceEEEEcCCCCCCEEEeCCC---------CcceeeEEcCCC-C-EEEEEEe-cCCCcEEEEEECCCCcEEEeecCCCc--
Confidence 57999999877666554321 124556666643 2 2333322 22245789999999887765533211
Q ss_pred cCccceEE--cce-EEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCcceeeEE-eeCCe-EEEEec
Q 011826 272 AGLFPTYL--NGV-IHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMNLG-VLGGC-LSICDV 346 (476)
Q Consensus 272 ~~~~~v~~--~G~-lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~~~L~-~~~G~-L~~~~~ 346 (476)
...+.+ +|. +.+.... + ....|..+|+.+.+...+..... . ...+. .-+|+ |.+...
T Consensus 225 --~~~~~~spdg~~la~~~~~---~--g~~~i~~~d~~~~~~~~l~~~~~---~--------~~~~~~spdg~~l~~~s~ 286 (415)
T 2hqs_A 225 --NGAPAFSPDGSKLAFALSK---T--GSLNLYVMDLASGQIRQVTDGRS---N--------NTEPTWFPDSQNLAFTSD 286 (415)
T ss_dssp --EEEEEECTTSSEEEEEECT---T--SSCEEEEEETTTCCEEECCCCSS---C--------EEEEEECTTSSEEEEEEC
T ss_pred --ccCEEEcCCCCEEEEEEec---C--CCceEEEEECCCCCEEeCcCCCC---c--------ccceEECCCCCEEEEEEC
Confidence 112222 465 4444432 1 22379999998877654432111 0 11111 12454 444443
Q ss_pred CCCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEE-ec---CCEEEEEeCCCCcEEEEE
Q 011826 347 TYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLF-CK---RRALVLYNPVEKNTRYLL 414 (476)
Q Consensus 347 ~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~-~~---~~~l~~ydl~t~~~~~v~ 414 (476)
......||+++-.+. . ...+... .....-+.+..+|+.++. .. ...+..+|+++++.+.+.
T Consensus 287 -~~g~~~i~~~d~~~~-~----~~~l~~~-~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~ 351 (415)
T 2hqs_A 287 -QAGRPQVYKVNINGG-A----PQRITWE-GSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLS 351 (415)
T ss_dssp -TTSSCEEEEEETTSS-C----CEECCCS-SSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECC
T ss_pred -CCCCcEEEEEECCCC-C----EEEEecC-CCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEec
Confidence 345577887764331 1 1122211 112223456678865544 33 258999999998876543
No 51
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=76.44 E-value=46 Score=30.42 Aligned_cols=112 Identities=13% Similarity=0.037 Sum_probs=65.3
Q ss_pred EEcceEEEEEeeccCCCCCcceEEEEECCCceE-EEEcCCCCCCCCCCccCCcceeeEEeeCCeEEEEecCCCCCeEEEe
Q 011826 278 YLNGVIHWVCDDIEDDQSCSDCIVGFDFEDERF-CVIPAPPHFAEKPKTRDNLYDMNLGVLGGCLSICDVTYFAPPDIWV 356 (476)
Q Consensus 278 ~~~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f-~~i~lP~~~~~~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~l~IWv 356 (476)
+.+|.||--+.. .....|..+|+.+.+- ..+++|+... ...+...+++|++... ... .+|+
T Consensus 50 ~~~~~LyestG~-----~g~S~v~~vD~~Tgkv~~~~~l~~~~F----------geGit~~g~~ly~ltw-~~~--~v~v 111 (262)
T 3nol_A 50 YRNGYFYESTGL-----NGRSSIRKVDIESGKTLQQIELGKRYF----------GEGISDWKDKIVGLTW-KNG--LGFV 111 (262)
T ss_dssp EETTEEEEEEEE-----TTEEEEEEECTTTCCEEEEEECCTTCC----------EEEEEEETTEEEEEES-SSS--EEEE
T ss_pred EECCEEEEECCC-----CCCceEEEEECCCCcEEEEEecCCccc----------eeEEEEeCCEEEEEEe-eCC--EEEE
Confidence 345666654433 1123799999998765 5577775432 2235666788888865 222 4556
Q ss_pred eccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEEe-cCCEEEEEeCCCCcE-EEEEE
Q 011826 357 MKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLFC-KRRALVLYNPVEKNT-RYLLI 415 (476)
Q Consensus 357 l~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~~-~~~~l~~ydl~t~~~-~~v~i 415 (476)
.+- .+-..+.+|+.+..+ .++..+|+.++.. ....+..+|++|.++ +.+.+
T Consensus 112 ~D~----~t~~~~~ti~~~~eG----~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V 164 (262)
T 3nol_A 112 WNI----RNLRQVRSFNYDGEG----WGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITV 164 (262)
T ss_dssp EET----TTCCEEEEEECSSCC----CCEEECSSCEEECCSSSEEEEECTTTCSEEEEEEC
T ss_pred EEC----ccCcEEEEEECCCCc----eEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEe
Confidence 552 234455566654222 2334456544444 457899999998664 44444
No 52
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=75.80 E-value=46 Score=30.05 Aligned_cols=115 Identities=10% Similarity=0.030 Sum_probs=69.1
Q ss_pred cceEE-cceEEEEEeeccCCCCCcceEEEEECCCceE-EEEcCCCCCCCCCCccCCcceeeEEeeCCeEEEEecCCCCCe
Q 011826 275 FPTYL-NGVIHWVCDDIEDDQSCSDCIVGFDFEDERF-CVIPAPPHFAEKPKTRDNLYDMNLGVLGGCLSICDVTYFAPP 352 (476)
Q Consensus 275 ~~v~~-~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f-~~i~lP~~~~~~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~l 352 (476)
.++.+ +|.||--+.. .....|..+|+.+.+- ..+++|.... ...+...+++|++... . .=
T Consensus 24 qGL~~~~~~LyestG~-----~g~S~v~~vD~~tgkv~~~~~l~~~~f----------geGi~~~~~~ly~ltw-~--~~ 85 (243)
T 3mbr_X 24 EGLFYLRGHLYESTGE-----TGRSSVRKVDLETGRILQRAEVPPPYF----------GAGIVAWRDRLIQLTW-R--NH 85 (243)
T ss_dssp EEEEEETTEEEEEECC-----TTSCEEEEEETTTCCEEEEEECCTTCC----------EEEEEEETTEEEEEES-S--SS
T ss_pred ccEEEECCEEEEECCC-----CCCceEEEEECCCCCEEEEEeCCCCcc----------eeEEEEeCCEEEEEEe-e--CC
Confidence 55544 4555543322 2223899999988766 5578886543 2235566889998865 2 23
Q ss_pred EEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCC-cEEEEecCCEEEEEeCCCCcE-EEEEE
Q 011826 353 DIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDG-SLLLFCKRRALVLYNPVEKNT-RYLLI 415 (476)
Q Consensus 353 ~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g-~il~~~~~~~l~~ydl~t~~~-~~v~i 415 (476)
.+|+.+- .+-.++.+|+.+.. +.++..+| .+++......+..+|++|.+. +.+.+
T Consensus 86 ~v~v~D~----~tl~~~~ti~~~~~----Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V 142 (243)
T 3mbr_X 86 EGFVYDL----ATLTPRARFRYPGE----GWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKV 142 (243)
T ss_dssp EEEEEET----TTTEEEEEEECSSC----CCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred EEEEEEC----CcCcEEEEEeCCCC----ceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEE
Confidence 5566652 34555666766422 23444455 566655567899999998765 44544
No 53
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=74.79 E-value=51 Score=30.19 Aligned_cols=209 Identities=9% Similarity=-0.046 Sum_probs=102.7
Q ss_pred cccceEEEeecCCCccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcC-ccccEEEEEEeC
Q 011826 178 SCNGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDD-FLNRTAEIYSLG 256 (476)
Q Consensus 178 s~~GLlcl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~-~~~~~~eVyss~ 256 (476)
+.+|-|.+... ....++++||.+++...+..... ....++.+|+.. +++.....+ .....+.+|+..
T Consensus 53 ~~~g~l~~~~~-~~~~i~~~d~~~~~~~~~~~~~~--------~~~~~i~~~~dg---~l~v~~~~~~~~~~~i~~~d~~ 120 (333)
T 2dg1_A 53 DRQGQLFLLDV-FEGNIFKINPETKEIKRPFVSHK--------ANPAAIKIHKDG---RLFVCYLGDFKSTGGIFAATEN 120 (333)
T ss_dssp CTTSCEEEEET-TTCEEEEECTTTCCEEEEEECSS--------SSEEEEEECTTS---CEEEEECTTSSSCCEEEEECTT
T ss_pred CCCCCEEEEEC-CCCEEEEEeCCCCcEEEEeeCCC--------CCcceEEECCCC---cEEEEeCCCCCCCceEEEEeCC
Confidence 45666555443 24579999999998776542111 124566777643 233322211 011367778877
Q ss_pred CCceEEc-cCCCCCCccCccceEE--cceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCcceee
Q 011826 257 GAAWRKV-GNAPWSPIAGLFPTYL--NGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMN 333 (476)
Q Consensus 257 t~~Wr~~-~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~~~ 333 (476)
++.-+.+ .... .......+.+ +|.+|....... .......|..+|..+.++..+.-. .. . ...
T Consensus 121 ~~~~~~~~~~~~--~~~~~~~i~~d~~g~l~v~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~--~~-~--------~~~ 186 (333)
T 2dg1_A 121 GDNLQDIIEDLS--TAYCIDDMVFDSKGGFYFTDFRGY-STNPLGGVYYVSPDFRTVTPIIQN--IS-V--------ANG 186 (333)
T ss_dssp SCSCEEEECSSS--SCCCEEEEEECTTSCEEEEECCCB-TTBCCEEEEEECTTSCCEEEEEEE--ES-S--------EEE
T ss_pred CCEEEEEEccCc--cCCcccceEECCCCCEEEEecccc-ccCCCceEEEEeCCCCEEEEeecC--CC-c--------ccc
Confidence 7765432 2111 0011122333 576655432100 001123799999887766654210 00 0 111
Q ss_pred EE-eeCC-eEEEEecCCCCCeEEEeeccCCCCcceEE---EEEEeCCCcceeeEEEEecCCcEEEEec-CCEEEEEeCCC
Q 011826 334 LG-VLGG-CLSICDVTYFAPPDIWVMKDYGVQESWIK---QLSVDNGYFGICRPIKYLDDGSLLLFCK-RRALVLYNPVE 407 (476)
Q Consensus 334 L~-~~~G-~L~~~~~~~~~~l~IWvl~~~~~~~~W~~---~~~I~~~~~~~~~p~~~~~~g~il~~~~-~~~l~~ydl~t 407 (476)
+. .-+| .|+++.. ....+.+|-++..+ ..... .............-+.+..+|.+++... .+.|..||+++
T Consensus 187 i~~~~dg~~l~v~~~-~~~~i~~~d~~~~g--~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g 263 (333)
T 2dg1_A 187 IALSTDEKVLWVTET-TANRLHRIALEDDG--VTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRG 263 (333)
T ss_dssp EEECTTSSEEEEEEG-GGTEEEEEEECTTS--SSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTTS
T ss_pred eEECCCCCEEEEEeC-CCCeEEEEEecCCC--cCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECCCC
Confidence 22 2245 4776654 34556666664332 12211 1111111111222345566788877654 47899999987
Q ss_pred CcEEEEEE
Q 011826 408 KNTRYLLI 415 (476)
Q Consensus 408 ~~~~~v~i 415 (476)
+.++.+..
T Consensus 264 ~~~~~~~~ 271 (333)
T 2dg1_A 264 YPIGQILI 271 (333)
T ss_dssp CEEEEEEC
T ss_pred CEEEEEEc
Confidence 76666654
No 54
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=74.67 E-value=60 Score=30.93 Aligned_cols=197 Identities=11% Similarity=0.018 Sum_probs=101.0
Q ss_pred ecccceEEEeecCCCccEEEEccccccee-ecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEe
Q 011826 177 NSCNGFLCLRKPFHRNPCIICNPITGEYV-TIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSL 255 (476)
Q Consensus 177 ~s~~GLlcl~~~~~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss 255 (476)
-+.+|-+++... .+..+.+||+.+++.. .++... ....++.+++..+ + ++.....+ ..+.+|+.
T Consensus 177 ~~~~~~~~~s~~-~d~~v~~~d~~~~~~~~~~~~~~---------~~~~~~~~~~~~~-~-l~~~~~~~---~~i~~~d~ 241 (433)
T 3bws_A 177 IPEHNELWVSQM-QANAVHVFDLKTLAYKATVDLTG---------KWSKILLYDPIRD-L-VYCSNWIS---EDISVIDR 241 (433)
T ss_dssp EGGGTEEEEEEG-GGTEEEEEETTTCCEEEEEECSS---------SSEEEEEEETTTT-E-EEEEETTT---TEEEEEET
T ss_pred EcCCCEEEEEEC-CCCEEEEEECCCceEEEEEcCCC---------CCeeEEEEcCCCC-E-EEEEecCC---CcEEEEEC
Confidence 345676665554 2457999999887653 333211 1245566776432 2 32222222 47889998
Q ss_pred CCCceEEccCCCCCCccCccceEE--cceEEEEEeeccCCCC-CcceEEEEECCCceEEEE-cCCCCCCCCCCccCCcce
Q 011826 256 GGAAWRKVGNAPWSPIAGLFPTYL--NGVIHWVCDDIEDDQS-CSDCIVGFDFEDERFCVI-PAPPHFAEKPKTRDNLYD 331 (476)
Q Consensus 256 ~t~~Wr~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~-~~~~Il~fD~~~e~f~~i-~lP~~~~~~~~~~~~~~~ 331 (476)
.++.....-..... ..++.+ +|...+.+....+... ....|..+|+.+.+.... ..+... ..
T Consensus 242 ~~~~~~~~~~~~~~----~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~----------~~ 307 (433)
T 3bws_A 242 KTKLEIRKTDKIGL----PRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNK----------RH 307 (433)
T ss_dssp TTTEEEEECCCCSE----EEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECE----------EE
T ss_pred CCCcEEEEecCCCC----ceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCc----------ce
Confidence 88764332211100 122222 4655555432110000 133789999987765433 212110 01
Q ss_pred eeEEeeCC-eEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEEecC-------------
Q 011826 332 MNLGVLGG-CLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLFCKR------------- 397 (476)
Q Consensus 332 ~~L~~~~G-~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~~~~------------- 397 (476)
+.+ .-+| .|++... .+..+.+|-++.. .....++.. ....-+.+..+|+.++....
T Consensus 308 ~~~-~~~g~~l~~~~~-~~~~v~v~d~~~~------~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g 377 (433)
T 3bws_A 308 IVS-GNTENKIYVSDM-CCSKIEVYDLKEK------KVQKSIPVF--DKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKG 377 (433)
T ss_dssp EEE-CSSTTEEEEEET-TTTEEEEEETTTT------EEEEEEECS--SSEEEEEECTTSSEEEEEECCCCCTTTCTTSCC
T ss_pred EEE-CCCCCEEEEEec-CCCEEEEEECCCC------cEEEEecCC--CCCCeEEEcCCCCEEEEEecCCCcccccccccc
Confidence 111 2234 4655544 5677999987632 223344432 11234556677875554322
Q ss_pred ---CEEEEEeCCCCcEEE
Q 011826 398 ---RALVLYNPVEKNTRY 412 (476)
Q Consensus 398 ---~~l~~ydl~t~~~~~ 412 (476)
+.+..||+++++...
T Consensus 378 ~~dg~v~~~d~~~~~~~~ 395 (433)
T 3bws_A 378 LVLGKVYVIDTTTDTVKE 395 (433)
T ss_dssp SSCCEEEEEETTTTEEEE
T ss_pred ccceEEEEEECCCCcEEE
Confidence 489999999887544
No 55
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=74.39 E-value=49 Score=29.74 Aligned_cols=67 Identities=12% Similarity=0.210 Sum_probs=39.6
Q ss_pred cccceEEEeecCCCccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCC
Q 011826 178 SCNGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGG 257 (476)
Q Consensus 178 s~~GLlcl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t 257 (476)
|.+|+|.... ++.+.|||+.|++...+-.... .......+.+.+.. .| ++....+ -.+.+++..+
T Consensus 34 S~~~~lAvg~---D~tV~iWd~~tg~~~~~~~~~~------~~~~V~~v~~~~~~-~~--l~sgs~D---g~v~iw~~~~ 98 (318)
T 4ggc_A 34 SSGNVLAVAL---DNSVYLWSASSGDILQLLQMEQ------PGEYISSVAWIKEG-NY--LAVGTSS---AEVQLWDVQQ 98 (318)
T ss_dssp CTTSEEEEEE---TTEEEEEETTTCCEEEEEECCS------TTCCEEEEEECTTS-SE--EEEEETT---SEEEEEETTT
T ss_pred CCCCEEEEEe---CCEEEEEECCCCCEEEEEEecC------CCCeEEEEEECCCC-CE--EEEEECC---CcEEEeecCC
Confidence 5677665443 4579999999998765433221 11234566676643 33 2333333 4788888887
Q ss_pred Cc
Q 011826 258 AA 259 (476)
Q Consensus 258 ~~ 259 (476)
+.
T Consensus 99 ~~ 100 (318)
T 4ggc_A 99 QK 100 (318)
T ss_dssp TE
T ss_pred ce
Confidence 74
No 56
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=74.21 E-value=1.6 Score=28.09 Aligned_cols=24 Identities=25% Similarity=0.264 Sum_probs=19.2
Q ss_pred hccCCCCCCCCHHHHHHHHhcCCc
Q 011826 43 AYHYSTIIDLPSHILIDILSRLPL 66 (476)
Q Consensus 43 ~~~~~~~~~LP~Dll~eIL~RLP~ 66 (476)
..++..+..||.||.+|||+--..
T Consensus 15 ~VD~eVF~~LP~dIQ~Ells~~~~ 38 (48)
T 2kwv_A 15 GVDQEVFKQLPADIQEEILSGKSR 38 (48)
T ss_dssp TCCGGGTTTSCHHHHHHHTTCCCS
T ss_pred CCCHHHHHHCcHHHHHHHHhcchH
Confidence 455778899999999999986543
No 57
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=73.50 E-value=57 Score=30.10 Aligned_cols=71 Identities=11% Similarity=0.085 Sum_probs=39.5
Q ss_pred CeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeC-CCcceeeEEEEecCCcEEE-EecCCEEEEEeCCC-CcEEEE
Q 011826 339 GCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDN-GYFGICRPIKYLDDGSLLL-FCKRRALVLYNPVE-KNTRYL 413 (476)
Q Consensus 339 G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~-~~~~~~~p~~~~~~g~il~-~~~~~~l~~ydl~t-~~~~~v 413 (476)
|.+.++.. .+..+.||-+.... ..+.... +.. .......-+.+..+|.+++ ...++.+..||+++ +++..+
T Consensus 221 ~~~l~s~~-~dg~i~iwd~~~~~--~~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~ 294 (379)
T 3jrp_A 221 RSYLASVS-QDRTCIIWTQDNEQ--GPWKKTL-LKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEPA 294 (379)
T ss_dssp SEEEEEEE-TTSCEEEEEESSTT--SCCEEEE-SSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETTEEEEE
T ss_pred CCeEEEEe-CCCEEEEEeCCCCC--ccceeee-eccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCCccccc
Confidence 45554444 56789999987643 2333321 111 1122223455667776555 45677899999874 344443
No 58
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=73.01 E-value=49 Score=29.12 Aligned_cols=191 Identities=10% Similarity=0.050 Sum_probs=97.2
Q ss_pred EEecccceEEEeecCCCccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEE
Q 011826 175 IVNSCNGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYS 254 (476)
Q Consensus 175 ~~~s~~GLlcl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVys 254 (476)
+.-..+|-|.+... ...++++||.++....++.... ....++.+|+.. . ++..... ...+.+|+
T Consensus 72 i~~~~~g~l~v~~~--~~~i~~~d~~~~~~~~~~~~~~--------~~p~~i~~~~~g-~--l~v~~~~---~~~i~~~~ 135 (270)
T 1rwi_B 72 LAVDGAGTVYVTDF--NNRVVTLAAGSNNQTVLPFDGL--------NYPEGLAVDTQG-A--VYVADRG---NNRVVKLA 135 (270)
T ss_dssp EEECTTCCEEEEET--TTEEEEECTTCSCCEECCCCSC--------SSEEEEEECTTC-C--EEEEEGG---GTEEEEEC
T ss_pred eEECCCCCEEEEcC--CCEEEEEeCCCceEeeeecCCc--------CCCcceEECCCC-C--EEEEECC---CCEEEEEE
Confidence 33344666555553 4579999999887666654221 134567777743 2 3333222 23566676
Q ss_pred eCCCceEEccCCCCCCccCccceEE--cceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCccee
Q 011826 255 LGGAAWRKVGNAPWSPIAGLFPTYL--NGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDM 332 (476)
Q Consensus 255 s~t~~Wr~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~~ 332 (476)
.++.......... .....++.+ +|.+|+.... ...|..||..+........... .. ..
T Consensus 136 ~~~~~~~~~~~~~---~~~p~~i~~~~~g~l~v~~~~-------~~~i~~~~~~~~~~~~~~~~~~--~~--------p~ 195 (270)
T 1rwi_B 136 AGSKTQTVLPFTG---LNDPDGVAVDNSGNVYVTDTD-------NNRVVKLEAESNNQVVLPFTDI--TA--------PW 195 (270)
T ss_dssp TTCCSCEECCCCS---CCSCCCEEECTTCCEEEEEGG-------GTEEEEECTTTCCEEECCCSSC--CS--------EE
T ss_pred CCCceeEeecccc---CCCceeEEEeCCCCEEEEECC-------CCEEEEEecCCCceEeecccCC--CC--------ce
Confidence 5555443322111 111134444 4786665432 2389999998876544322111 11 22
Q ss_pred eEEe-eCCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEEe-cCCEEEEEeCCCCc
Q 011826 333 NLGV-LGGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLFC-KRRALVLYNPVEKN 409 (476)
Q Consensus 333 ~L~~-~~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~~-~~~~l~~ydl~t~~ 409 (476)
.+.. -+|.|+++.. ....+.+|-.+.. .... +.........-+.+..+|.+++.. .++.+..|++..++
T Consensus 196 ~i~~d~~g~l~v~~~-~~~~v~~~~~~~~---~~~~----~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 196 GIAVDEAGTVYVTEH-NTNQVVKLLAGST---TSTV----LPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp EEEECTTCCEEEEET-TTSCEEEECTTCS---CCEE----CCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred EEEECCCCCEEEEEC-CCCcEEEEcCCCC---ccee----eccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 2333 3467888765 3445666544321 1111 111111111234455677877765 35688888887654
No 59
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=72.47 E-value=57 Score=29.64 Aligned_cols=103 Identities=12% Similarity=0.016 Sum_probs=55.7
Q ss_pred eEEEEECCC-ceEEE-----EcCCCCCCCCCCccCCcceeeEE-eeCCe-EEEEecCCCCCeEEEeeccCCCCcceEEEE
Q 011826 299 CIVGFDFED-ERFCV-----IPAPPHFAEKPKTRDNLYDMNLG-VLGGC-LSICDVTYFAPPDIWVMKDYGVQESWIKQL 370 (476)
Q Consensus 299 ~Il~fD~~~-e~f~~-----i~lP~~~~~~~~~~~~~~~~~L~-~~~G~-L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~ 370 (476)
.|..||+.+ .+... +..+.... ...+. .-+|. |+++.. ....+.+|.++... ..+....
T Consensus 152 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~pdg~~l~~~~~-~~~~i~~~~~~~~~--g~~~~~~ 218 (343)
T 1ri6_A 152 RICLFTVSDDGHLVAQDPAEVTTVEGAG----------PRHMVFHPNEQYAYCVNE-LNSSVDVWELKDPH--GNIECVQ 218 (343)
T ss_dssp EEEEEEECTTSCEEEEEEEEEECSTTCC----------EEEEEECTTSSEEEEEET-TTTEEEEEESSCTT--SCCEEEE
T ss_pred EEEEEEecCCCceeeecccccccCCCCC----------cceEEECCCCCEEEEEeC-CCCEEEEEEecCCC--CcEEEEe
Confidence 799999987 65543 33332211 11122 22354 555553 46779999986432 3344443
Q ss_pred EEeCCC---c--ceeeEEEEecCCcEEEE-e-cCCEEEEEeCC--CCcEEEEE
Q 011826 371 SVDNGY---F--GICRPIKYLDDGSLLLF-C-KRRALVLYNPV--EKNTRYLL 414 (476)
Q Consensus 371 ~I~~~~---~--~~~~p~~~~~~g~il~~-~-~~~~l~~ydl~--t~~~~~v~ 414 (476)
.+.... . ....-+.+..+|+.++. . .++.+..||++ +++.+.+.
T Consensus 219 ~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~ 271 (343)
T 1ri6_A 219 TLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEG 271 (343)
T ss_dssp EEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEE
T ss_pred eccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEee
Confidence 443211 1 11123566777865553 3 45789999988 55666554
No 60
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=71.27 E-value=61 Score=29.45 Aligned_cols=204 Identities=9% Similarity=-0.024 Sum_probs=100.0
Q ss_pred ecccceEEEeecCCCccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeC
Q 011826 177 NSCNGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLG 256 (476)
Q Consensus 177 ~s~~GLlcl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~ 256 (476)
...+|-|.+.+. ....++.+||.|++...+..+. ...++.+++..+ ++.. .. ..+.+|+..
T Consensus 21 ~~~~~~l~~~d~-~~~~i~~~d~~~~~~~~~~~~~----------~~~~i~~~~dG~---l~v~-~~----~~l~~~d~~ 81 (297)
T 3g4e_A 21 EEVSNSLLFVDI-PAKKVCRWDSFTKQVQRVTMDA----------PVSSVALRQSGG---YVAT-IG----TKFCALNWK 81 (297)
T ss_dssp ETTTTEEEEEET-TTTEEEEEETTTCCEEEEECSS----------CEEEEEEBTTSS---EEEE-ET----TEEEEEETT
T ss_pred ECCCCEEEEEEC-CCCEEEEEECCCCcEEEEeCCC----------ceEEEEECCCCC---EEEE-EC----CeEEEEECC
Confidence 334565555553 2457999999998876554321 234566776543 2222 22 468889999
Q ss_pred CCceEEccCCCC-CCccCccceEE--cceEEEEEeeccC----CCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCc
Q 011826 257 GAAWRKVGNAPW-SPIAGLFPTYL--NGVIHWVCDDIED----DQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNL 329 (476)
Q Consensus 257 t~~Wr~~~~~p~-~~~~~~~~v~~--~G~lywl~~~~~~----~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~ 329 (476)
++.++.+..... .+......+.+ +|.+|.-...... .......|..+|.... ...+. .... .
T Consensus 82 ~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~~~--~~~~-~------- 150 (297)
T 3g4e_A 82 EQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH-VKKYF--DQVD-I------- 150 (297)
T ss_dssp TTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC-EEEEE--EEES-B-------
T ss_pred CCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC-EEEEe--eccc-c-------
Confidence 998877654321 11111133333 5776553322100 0012237888887643 22221 0000 0
Q ss_pred ceeeEEe-eCC-eEEEEecCCCCCeEEEeec-cCCCCcceEEEEE-EeCCC-cceeeEEEEecCCcEEEEec-CCEEEEE
Q 011826 330 YDMNLGV-LGG-CLSICDVTYFAPPDIWVMK-DYGVQESWIKQLS-VDNGY-FGICRPIKYLDDGSLLLFCK-RRALVLY 403 (476)
Q Consensus 330 ~~~~L~~-~~G-~L~~~~~~~~~~l~IWvl~-~~~~~~~W~~~~~-I~~~~-~~~~~p~~~~~~g~il~~~~-~~~l~~y 403 (476)
.-.++- -+| .|+++.. ....+.+|-++ +.+ ....... +.... .....-+.+..+|.+++... ...|..|
T Consensus 151 -pngi~~spdg~~lyv~~~-~~~~i~~~~~d~~~G---~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~ 225 (297)
T 3g4e_A 151 -SNGLDWSLDHKIFYYIDS-LSYSVDAFDYDLQTG---QISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRL 225 (297)
T ss_dssp -EEEEEECTTSCEEEEEEG-GGTEEEEEEECTTTC---CEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEE
T ss_pred -ccceEEcCCCCEEEEecC-CCCcEEEEeccCCCC---cccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEE
Confidence 111222 234 4666664 33445555443 222 2322111 12211 11112234556788887754 5679999
Q ss_pred eCCCCcE-EEEEE
Q 011826 404 NPVEKNT-RYLLI 415 (476)
Q Consensus 404 dl~t~~~-~~v~i 415 (476)
|++++++ ..+..
T Consensus 226 d~~tG~~~~~i~~ 238 (297)
T 3g4e_A 226 DPVTGKRLQTVKL 238 (297)
T ss_dssp CTTTCCEEEEEEC
T ss_pred cCCCceEEEEEEC
Confidence 9996654 45543
No 61
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=70.21 E-value=71 Score=29.85 Aligned_cols=186 Identities=8% Similarity=0.025 Sum_probs=96.7
Q ss_pred CccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCCCceEEccCCCCCC
Q 011826 191 RNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGGAAWRKVGNAPWSP 270 (476)
Q Consensus 191 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t~~Wr~~~~~p~~~ 270 (476)
+..+.|||..+++....-.... .......+.+.+..+ +.+.....+ ..+.+++..++..+.+.......
T Consensus 95 dg~i~iwd~~~~~~~~~~~~~~------h~~~v~~~~~~~~~~--~~l~s~~~d---~~i~iwd~~~~~~~~~~~~~~~~ 163 (383)
T 3ei3_B 95 GGDIILWDYDVQNKTSFIQGMG------PGDAITGMKFNQFNT--NQLFVSSIR---GATTLRDFSGSVIQVFAKTDSWD 163 (383)
T ss_dssp TSCEEEEETTSTTCEEEECCCS------TTCBEEEEEEETTEE--EEEEEEETT---TEEEEEETTSCEEEEEECCCCSS
T ss_pred CCeEEEEeCCCcccceeeecCC------cCCceeEEEeCCCCC--CEEEEEeCC---CEEEEEECCCCceEEEeccCCCC
Confidence 4578999999887655443211 122455666766322 233333332 47888988877666554332111
Q ss_pred ccCc-cceEEcceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCcceeeEEe-eCCe-EEEEecC
Q 011826 271 IAGL-FPTYLNGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMNLGV-LGGC-LSICDVT 347 (476)
Q Consensus 271 ~~~~-~~v~~~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~~~L~~-~~G~-L~~~~~~ 347 (476)
..-. -...-+|.+...+.. ...|..+|+..+....+...... ...+.- -+|. +.++..
T Consensus 164 ~~v~~~~~~~~~~~l~~~~~-------d~~i~i~d~~~~~~~~~~~h~~~-----------v~~~~~~~~~~~~l~s~~- 224 (383)
T 3ei3_B 164 YWYCCVDVSVSRQMLATGDS-------TGRLLLLGLDGHEIFKEKLHKAK-----------VTHAEFNPRCDWLMATSS- 224 (383)
T ss_dssp CCEEEEEEETTTTEEEEEET-------TSEEEEEETTSCEEEEEECSSSC-----------EEEEEECSSCTTEEEEEE-
T ss_pred CCeEEEEECCCCCEEEEECC-------CCCEEEEECCCCEEEEeccCCCc-----------EEEEEECCCCCCEEEEEe-
Confidence 0000 111223443333322 23899999976666555432211 111222 2343 444443
Q ss_pred CCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEec-CCcEEEE-ecCCEEEEEeCCCCcE
Q 011826 348 YFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLD-DGSLLLF-CKRRALVLYNPVEKNT 410 (476)
Q Consensus 348 ~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~-~g~il~~-~~~~~l~~ydl~t~~~ 410 (476)
.+..+.||-+........- ...+.. .....-+.+.. +|..++. ..++.+..||+++.+.
T Consensus 225 ~d~~i~iwd~~~~~~~~~~--~~~~~~--~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~ 285 (383)
T 3ei3_B 225 VDATVKLWDLRNIKDKNSY--IAEMPH--EKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSK 285 (383)
T ss_dssp TTSEEEEEEGGGCCSTTCE--EEEEEC--SSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTS
T ss_pred CCCEEEEEeCCCCCcccce--EEEecC--CCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcc
Confidence 4678999998764321222 223332 22223455666 7766554 4568999999987654
No 62
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=70.10 E-value=68 Score=29.54 Aligned_cols=116 Identities=9% Similarity=0.017 Sum_probs=64.0
Q ss_pred cceEEEEEeeccCCCCCcceEEEEECCCceEEEEcC-CCCCCCCCCccCCcceeeEE-eeCCe-EEEEecCCCCCeEEEe
Q 011826 280 NGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPA-PPHFAEKPKTRDNLYDMNLG-VLGGC-LSICDVTYFAPPDIWV 356 (476)
Q Consensus 280 ~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~l-P~~~~~~~~~~~~~~~~~L~-~~~G~-L~~~~~~~~~~l~IWv 356 (476)
+|.+|..... + ....|..||+.+.+.+.+.. +.... . ...+. .-+|+ |+++.. ....+.+|.
T Consensus 50 dg~l~~~~~~---~--~~~~v~~~~~~~g~~~~~~~~~~~~~-~--------p~~~a~spdg~~l~~~~~-~~~~v~v~~ 114 (347)
T 3hfq_A 50 KDCLYSVDKE---D--DEGGIAAWQIDGQTAHKLNTVVAPGT-P--------PAYVAVDEARQLVYSANY-HKGTAEVMK 114 (347)
T ss_dssp TCEEEEEEEE---T--TEEEEEEEEEETTEEEEEEEEEEESC-C--------CSEEEEETTTTEEEEEET-TTTEEEEEE
T ss_pred CCeEEEEEec---C--CCceEEEEEecCCcEEEeeeeecCCC-C--------CEEEEECCCCCEEEEEeC-CCCEEEEEE
Confidence 6887766642 1 12379999998887766532 21111 1 11222 22454 555553 457799999
Q ss_pred eccCCCCcceEEEEEEeCCCcc--------eeeEEEEecCCcEEEEec-CCEEEEEeCC-CCcEEEE
Q 011826 357 MKDYGVQESWIKQLSVDNGYFG--------ICRPIKYLDDGSLLLFCK-RRALVLYNPV-EKNTRYL 413 (476)
Q Consensus 357 l~~~~~~~~W~~~~~I~~~~~~--------~~~p~~~~~~g~il~~~~-~~~l~~ydl~-t~~~~~v 413 (476)
++..+ .......+...... ...-+.+..+|++++... .+.+..||++ ++++..+
T Consensus 115 ~~~~g---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~ 178 (347)
T 3hfq_A 115 IAADG---ALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQ 178 (347)
T ss_dssp ECTTS---CEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEE
T ss_pred eCCCC---CeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEe
Confidence 97543 33444444432110 112255677888554433 4679999988 5666544
No 63
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=70.01 E-value=57 Score=28.65 Aligned_cols=194 Identities=8% Similarity=-0.012 Sum_probs=92.3
Q ss_pred EEecccceEEE-eecCCCccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEE
Q 011826 175 IVNSCNGFLCL-RKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIY 253 (476)
Q Consensus 175 ~~~s~~GLlcl-~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVy 253 (476)
+..+.+|-|.+ ... ....+.++|+-++....++.... ....++.+|+.. . +++... + ..+.+|
T Consensus 29 i~~~~~g~l~v~~~~-~~~~i~~~~~~~~~~~~~~~~~~--------~~p~~i~~~~~g-~--l~v~~~-~---~~i~~~ 92 (270)
T 1rwi_B 29 VAVDSAGNVYVTSEG-MYGRVVKLATGSTGTTVLPFNGL--------YQPQGLAVDGAG-T--VYVTDF-N---NRVVTL 92 (270)
T ss_dssp EEECTTCCEEEEECS-SSCEEEEECC-----EECCCCSC--------CSCCCEEECTTC-C--EEEEET-T---TEEEEE
T ss_pred eEECCCCCEEEEccC-CCCcEEEecCCCcccceEeeCCc--------CCcceeEECCCC-C--EEEEcC-C---CEEEEE
Confidence 44445666655 432 34578999998887666553221 123446666642 2 333222 1 367778
Q ss_pred EeCCCceEEccCCCCCCccCccceEE--cceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCcce
Q 011826 254 SLGGAAWRKVGNAPWSPIAGLFPTYL--NGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYD 331 (476)
Q Consensus 254 ss~t~~Wr~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~ 331 (476)
+..++.-..+.... . ....++.+ +|.+|+.... ...|..||..+......... ... . .
T Consensus 93 d~~~~~~~~~~~~~-~--~~p~~i~~~~~g~l~v~~~~-------~~~i~~~~~~~~~~~~~~~~-~~~-~--------p 152 (270)
T 1rwi_B 93 AAGSNNQTVLPFDG-L--NYPEGLAVDTQGAVYVADRG-------NNRVVKLAAGSKTQTVLPFT-GLN-D--------P 152 (270)
T ss_dssp CTTCSCCEECCCCS-C--SSEEEEEECTTCCEEEEEGG-------GTEEEEECTTCCSCEECCCC-SCC-S--------C
T ss_pred eCCCceEeeeecCC-c--CCCcceEECCCCCEEEEECC-------CCEEEEEECCCceeEeeccc-cCC-C--------c
Confidence 77766544333211 0 11133333 5776665432 23788998776554432211 111 1 1
Q ss_pred eeEEe-eCCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEEec-CCEEEEEeCCCCc
Q 011826 332 MNLGV-LGGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLFCK-RRALVLYNPVEKN 409 (476)
Q Consensus 332 ~~L~~-~~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~~~-~~~l~~ydl~t~~ 409 (476)
..+.. -+|.|++... ....+.+|-.+.. .... ..........-+.+..+|.+++... .+.+..||++++.
T Consensus 153 ~~i~~~~~g~l~v~~~-~~~~i~~~~~~~~---~~~~----~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~ 224 (270)
T 1rwi_B 153 DGVAVDNSGNVYVTDT-DNNRVVKLEAESN---NQVV----LPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT 224 (270)
T ss_dssp CCEEECTTCCEEEEEG-GGTEEEEECTTTC---CEEE----CCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSC
T ss_pred eeEEEeCCCCEEEEEC-CCCEEEEEecCCC---ceEe----ecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCc
Confidence 12222 2577777765 2344555543321 1111 1111111112244556677777654 5689999998876
Q ss_pred EEE
Q 011826 410 TRY 412 (476)
Q Consensus 410 ~~~ 412 (476)
...
T Consensus 225 ~~~ 227 (270)
T 1rwi_B 225 STV 227 (270)
T ss_dssp CEE
T ss_pred cee
Confidence 544
No 64
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=69.39 E-value=74 Score=29.73 Aligned_cols=190 Identities=12% Similarity=0.053 Sum_probs=97.9
Q ss_pred cccc-eEEEeecCCCccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeC
Q 011826 178 SCNG-FLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLG 256 (476)
Q Consensus 178 s~~G-Llcl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~ 256 (476)
+.+| .|.+... .+..+.|||+.+++....-.... ...++.+++.. .+ ++..... ...+.+|+..
T Consensus 82 spdg~~l~~~~~-~~~~v~v~d~~~~~~~~~~~~~~---------~~~~~~~s~dg-~~-l~~~~~~---~~~v~~~d~~ 146 (391)
T 1l0q_A 82 SPDGKQVYVTNM-ASSTLSVIDTTSNTVAGTVKTGK---------SPLGLALSPDG-KK-LYVTNNG---DKTVSVINTV 146 (391)
T ss_dssp CTTSSEEEEEET-TTTEEEEEETTTTEEEEEEECSS---------SEEEEEECTTS-SE-EEEEETT---TTEEEEEETT
T ss_pred CCCCCEEEEEEC-CCCEEEEEECCCCeEEEEEeCCC---------CcceEEECCCC-CE-EEEEeCC---CCEEEEEECC
Confidence 3344 3444432 34679999999988654433221 23556666643 33 2222222 2478889988
Q ss_pred CCceEEccCCCCCCccCccceEE--cceEEEEEeeccCCCCCcceEEEEECCCceEEEE-cCCCCCCCCCCccCCcceee
Q 011826 257 GAAWRKVGNAPWSPIAGLFPTYL--NGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVI-PAPPHFAEKPKTRDNLYDMN 333 (476)
Q Consensus 257 t~~Wr~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i-~lP~~~~~~~~~~~~~~~~~ 333 (476)
++.....-.....+ ..+.+ +|...+++.. ....|..+|+.+.+.... ..... ...
T Consensus 147 ~~~~~~~~~~~~~~----~~~~~~~dg~~l~~~~~------~~~~v~~~d~~~~~~~~~~~~~~~------------~~~ 204 (391)
T 1l0q_A 147 TKAVINTVSVGRSP----KGIAVTPDGTKVYVANF------DSMSISVIDTVTNSVIDTVKVEAA------------PSG 204 (391)
T ss_dssp TTEEEEEEECCSSE----EEEEECTTSSEEEEEET------TTTEEEEEETTTTEEEEEEECSSE------------EEE
T ss_pred CCcEEEEEecCCCc----ceEEECCCCCEEEEEeC------CCCEEEEEECCCCeEEEEEecCCC------------ccc
Confidence 87654332111111 22222 4544444432 123799999988765433 22110 111
Q ss_pred EEe-eCC-eEEEEecC-CCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEE-EE-ecCCEEEEEeCCCC
Q 011826 334 LGV-LGG-CLSICDVT-YFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLL-LF-CKRRALVLYNPVEK 408 (476)
Q Consensus 334 L~~-~~G-~L~~~~~~-~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il-~~-~~~~~l~~ydl~t~ 408 (476)
+.- -+| .|++.... ....+.+|-++.. .....+.... . ..-+.+..+|+.+ +. ..++.+..||++++
T Consensus 205 ~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~------~~~~~~~~~~-~-~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~ 276 (391)
T 1l0q_A 205 IAVNPEGTKAYVTNVDKYFNTVSMIDTGTN------KITARIPVGP-D-PAGIAVTPDGKKVYVALSFXNTVSVIDTATN 276 (391)
T ss_dssp EEECTTSSEEEEEEECSSCCEEEEEETTTT------EEEEEEECCS-S-EEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred eEECCCCCEEEEEecCcCCCcEEEEECCCC------eEEEEEecCC-C-ccEEEEccCCCEEEEEcCCCCEEEEEECCCC
Confidence 222 234 34444421 3566888876532 2334444421 1 1234566778655 44 34678999999988
Q ss_pred cEEE
Q 011826 409 NTRY 412 (476)
Q Consensus 409 ~~~~ 412 (476)
++..
T Consensus 277 ~~~~ 280 (391)
T 1l0q_A 277 TITA 280 (391)
T ss_dssp EEEE
T ss_pred cEEE
Confidence 7644
No 65
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=69.22 E-value=59 Score=31.51 Aligned_cols=113 Identities=7% Similarity=0.028 Sum_probs=60.6
Q ss_pred EcceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCcceeeEEeeCCeEEEEecCCCCCeEEEeec
Q 011826 279 LNGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMNLGVLGGCLSICDVTYFAPPDIWVMK 358 (476)
Q Consensus 279 ~~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~l~IWvl~ 358 (476)
-+|.|||.... ...|..+|+.+.+...+...... . .+.+...++.|+++.. ...-.||+++
T Consensus 140 ~~g~lyv~d~~-------~~~I~~id~~~g~~~~~~~~~~~---------~-~ia~~~~g~~l~~~d~--~~~~~I~~~d 200 (409)
T 3hrp_A 140 GNNTVLAYQRD-------DPRVRLISVDDNKVTTVHPGFKG---------G-KPAVTKDKQRVYSIGW--EGTHTVYVYM 200 (409)
T ss_dssp STTEEEEEETT-------TTEEEEEETTTTEEEEEEETCCB---------C-BCEECTTSSEEEEEBS--STTCEEEEEE
T ss_pred CCCCEEEEecC-------CCcEEEEECCCCEEEEeeccCCC---------C-ceeEecCCCcEEEEec--CCCceEEEEE
Confidence 36889887643 23899999998877766332110 0 2222222234555554 2222777776
Q ss_pred cCCCCcceE--EEEEEeCCCcceeeEEEEec-CCcEEEEecCCEEEEEeCCCCcEEEE
Q 011826 359 DYGVQESWI--KQLSVDNGYFGICRPIKYLD-DGSLLLFCKRRALVLYNPVEKNTRYL 413 (476)
Q Consensus 359 ~~~~~~~W~--~~~~I~~~~~~~~~p~~~~~-~g~il~~~~~~~l~~ydl~t~~~~~v 413 (476)
..+ .|. ..-.+.........-+.+.. +|.|++....+.++.||++++....+
T Consensus 201 ~~~---~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 201 KAS---GWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp GGG---TTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEE
T ss_pred cCC---CceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEE
Confidence 543 233 11111110111112244555 56777755556899999998876555
No 66
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=67.90 E-value=1.6e+02 Score=32.90 Aligned_cols=197 Identities=10% Similarity=0.038 Sum_probs=97.2
Q ss_pred EEecccceEEEeecCCCccEEEEccccccee-ecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEE
Q 011826 175 IVNSCNGFLCLRKPFHRNPCIICNPITGEYV-TIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIY 253 (476)
Q Consensus 175 ~~~s~~GLlcl~~~~~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVy 253 (476)
+.-+.+|-+++... .++.+.|||..|++.. .+.. . .....++.++|.. .| ++....+ ..+.|+
T Consensus 621 ~~~s~~~~~l~s~~-~d~~i~vw~~~~~~~~~~~~~-h--------~~~v~~~~~s~~~-~~--l~s~~~d---~~v~vw 684 (1249)
T 3sfz_A 621 ACFSQDGQRIASCG-ADKTLQVFKAETGEKLLDIKA-H--------EDEVLCCAFSSDD-SY--IATCSAD---KKVKIW 684 (1249)
T ss_dssp EEECTTSSEEEEEE-TTSCEEEEETTTCCEEEEECC-C--------SSCEEEEEECTTS-SE--EEEEETT---SEEEEE
T ss_pred EEECCCCCEEEEEe-CCCeEEEEECCCCCEEEEecc-C--------CCCEEEEEEecCC-CE--EEEEeCC---CeEEEE
Confidence 33444554444433 3567999999998754 3332 1 1234566676642 33 3333332 478999
Q ss_pred EeCCCceEEccCCCCCCccCccceEEc--ceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCcce
Q 011826 254 SLGGAAWRKVGNAPWSPIAGLFPTYLN--GVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYD 331 (476)
Q Consensus 254 ss~t~~Wr~~~~~p~~~~~~~~~v~~~--G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~ 331 (476)
+..++.-...-....... ..+.+. +.-..++.. + ....|..+|+.+.+....-.. ... . .
T Consensus 685 d~~~~~~~~~~~~~~~~v---~~~~~~~~~~~~~l~sg---~--~d~~v~vwd~~~~~~~~~~~~-h~~--------~-v 746 (1249)
T 3sfz_A 685 DSATGKLVHTYDEHSEQV---NCCHFTNKSNHLLLATG---S--NDFFLKLWDLNQKECRNTMFG-HTN--------S-V 746 (1249)
T ss_dssp ETTTCCEEEEEECCSSCE---EEEEECSSSSCCEEEEE---E--TTSCEEEEETTSSSEEEEECC-CSS--------C-E
T ss_pred ECCCCceEEEEcCCCCcE---EEEEEecCCCceEEEEE---e--CCCeEEEEECCCcchhheecC-CCC--------C-E
Confidence 998875332211110010 122221 111112111 1 123788999888765432111 100 0 1
Q ss_pred eeEE-eeCCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCC------------cceeeEEEEecCCcEEEEecCC
Q 011826 332 MNLG-VLGGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGY------------FGICRPIKYLDDGSLLLFCKRR 398 (476)
Q Consensus 332 ~~L~-~~~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~------------~~~~~p~~~~~~g~il~~~~~~ 398 (476)
..+. .-+|.+.++.. .+..+.+|-+.... ....+.... .....-+.+..+|+.++....+
T Consensus 747 ~~~~~sp~~~~l~s~s-~dg~v~vwd~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~ 819 (1249)
T 3sfz_A 747 NHCRFSPDDELLASCS-ADGTLRLWDVRSAN------ERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKN 819 (1249)
T ss_dssp EEEEECSSTTEEEEEE-SSSEEEEEEGGGTE------EEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETT
T ss_pred EEEEEecCCCEEEEEE-CCCeEEEEeCCCCc------ccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCC
Confidence 1121 12354444433 46789999887532 111222110 0011223456778877777788
Q ss_pred EEEEEeCCCCcEEE
Q 011826 399 ALVLYNPVEKNTRY 412 (476)
Q Consensus 399 ~l~~ydl~t~~~~~ 412 (476)
.+..||+.++....
T Consensus 820 ~v~~~d~~~~~~~~ 833 (1249)
T 3sfz_A 820 KVLLFDIHTSGLLA 833 (1249)
T ss_dssp EEEEEETTTCCEEE
T ss_pred cEEEEEecCCCcee
Confidence 99999998876543
No 67
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=67.67 E-value=73 Score=28.98 Aligned_cols=201 Identities=6% Similarity=-0.031 Sum_probs=93.0
Q ss_pred EEEeecCCCccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCCCceEE
Q 011826 183 LCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGGAAWRK 262 (476)
Q Consensus 183 lcl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t~~Wr~ 262 (476)
|++... ....++.|+| +++...+..+. ....++.+|+.. +++..... ...+.+|+.. ++.+.
T Consensus 59 l~~~d~-~~~~i~~~~~-~g~~~~~~~~~---------~~~~gl~~d~dG---~l~v~~~~---~~~v~~~~~~-g~~~~ 120 (305)
T 3dr2_A 59 LVWSDL-VGRRVLGWRE-DGTVDVLLDAT---------AFTNGNAVDAQQ---RLVHCEHG---RRAITRSDAD-GQAHL 120 (305)
T ss_dssp EEEEET-TTTEEEEEET-TSCEEEEEESC---------SCEEEEEECTTS---CEEEEETT---TTEEEEECTT-SCEEE
T ss_pred EEEEEC-CCCEEEEEeC-CCCEEEEeCCC---------CccceeeECCCC---CEEEEECC---CCEEEEECCC-CCEEE
Confidence 444443 3457889999 66655443221 124567777643 23332221 2356667664 65554
Q ss_pred ccCCC-CCCccCccceEE--cceEEEEEe---ecc-------CCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCc
Q 011826 263 VGNAP-WSPIAGLFPTYL--NGVIHWVCD---DIE-------DDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNL 329 (476)
Q Consensus 263 ~~~~p-~~~~~~~~~v~~--~G~lywl~~---~~~-------~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~ 329 (476)
+.... .........+.+ +|.+|+... ... ........|..+|..+.++..+. . .. .
T Consensus 121 ~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~--~~-~------- 189 (305)
T 3dr2_A 121 LVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-D--LD-H------- 189 (305)
T ss_dssp EECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-E--ES-S-------
T ss_pred EEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-c--CC-C-------
Confidence 43211 111111122322 577665311 000 00011247999999888777654 1 11 1
Q ss_pred ceeeEE-eeCCe-EEEEecCCC--CCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEEecCCEEEEEeC
Q 011826 330 YDMNLG-VLGGC-LSICDVTYF--APPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLFCKRRALVLYNP 405 (476)
Q Consensus 330 ~~~~L~-~~~G~-L~~~~~~~~--~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~~~~~~l~~ydl 405 (476)
.-.++ .-+|+ |+++..... ..-.||+.+-.+ .. ......+.........-+.+..+|.|++.. ...|..||+
T Consensus 190 -p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~-~~-l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~-~~gv~~~~~ 265 (305)
T 3dr2_A 190 -PNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRD-GA-LHDRRHFASVPDGLPDGFCVDRGGWLWSSS-GTGVCVFDS 265 (305)
T ss_dssp -EEEEEECTTSSEEEEEECCC---CCCEEEEEEEET-TE-EEEEEEEECCSSSCCCSEEECTTSCEEECC-SSEEEEECT
T ss_pred -CcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecC-CC-ccCCeEEEECCCCCCCeEEECCCCCEEEec-CCcEEEECC
Confidence 11122 22454 666654210 013455543222 11 222222111001111123455677866655 567999999
Q ss_pred CCCcEEEEEEe
Q 011826 406 VEKNTRYLLIH 416 (476)
Q Consensus 406 ~t~~~~~v~i~ 416 (476)
+++.+..+...
T Consensus 266 ~g~~~~~~~~~ 276 (305)
T 3dr2_A 266 DGQLLGHIPTP 276 (305)
T ss_dssp TSCEEEEEECS
T ss_pred CCCEEEEEECC
Confidence 88877777644
No 68
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=67.59 E-value=1.1e+02 Score=30.94 Aligned_cols=197 Identities=12% Similarity=0.016 Sum_probs=99.8
Q ss_pred CccEEEEcccccceee-cCCCCCCCCcCcc--ceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCCCce---EEcc
Q 011826 191 RNPCIICNPITGEYVT-IPKPAAEDDKKTL--RTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGGAAW---RKVG 264 (476)
Q Consensus 191 ~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~--~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t~~W---r~~~ 264 (476)
+..+.|||..|++... ++..........+ .....++.+++.. .+-++.... .-.+.+++..++.- ..++
T Consensus 247 ~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~-~~~~vs~~~----~g~i~vvd~~~~~~l~~~~i~ 321 (543)
T 1nir_A 247 PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEH-PEFIVNVKE----TGKVLLVNYKDIDNLTVTSIG 321 (543)
T ss_dssp SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSS-SEEEEEETT----TTEEEEEECTTSSSCEEEEEE
T ss_pred CCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCC-CEEEEEECC----CCeEEEEEecCCCcceeEEec
Confidence 4568899998887533 3321100000000 1123445555532 333333322 23667777665421 1222
Q ss_pred CCCCCCccCccceEE--cceEEEEEeeccCCCCCcceEEEEECCCceEEE-EcCCCCCCCCCCccCCcceeeEEeeC-Ce
Q 011826 265 NAPWSPIAGLFPTYL--NGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCV-IPAPPHFAEKPKTRDNLYDMNLGVLG-GC 340 (476)
Q Consensus 265 ~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~-i~lP~~~~~~~~~~~~~~~~~L~~~~-G~ 340 (476)
... .+ ..+.+ +|...+.+.. ..+.|..+|+.+.+... ++........ ....+..-+ |.
T Consensus 322 ~~~-~~----~~~~~spdg~~l~va~~------~~~~v~v~D~~tg~l~~~i~~g~~ph~g-------~g~~~~~p~~g~ 383 (543)
T 1nir_A 322 AAP-FL----HDGGWDSSHRYFMTAAN------NSNKVAVIDSKDRRLSALVDVGKTPHPG-------RGANFVHPKYGP 383 (543)
T ss_dssp CCS-SC----CCEEECTTSCEEEEEEG------GGTEEEEEETTTTEEEEEEECSSSBCCT-------TCEEEEETTTEE
T ss_pred cCc-Cc----cCceECCCCCEEEEEec------CCCeEEEEECCCCeEEEeeccCCCCCCC-------CCcccCCCCCcc
Confidence 110 11 22222 4664444432 23478889999887644 3432111100 022232223 56
Q ss_pred EEEEecCCCCCeEEEeeccCCC-CcceEEEEEEeCCCcceeeEEEEecCCcEEEEec--------CCEEEEEeCCCCcEE
Q 011826 341 LSICDVTYFAPPDIWVMKDYGV-QESWIKQLSVDNGYFGICRPIKYLDDGSLLLFCK--------RRALVLYNPVEKNTR 411 (476)
Q Consensus 341 L~~~~~~~~~~l~IWvl~~~~~-~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~~~--------~~~l~~ydl~t~~~~ 411 (476)
+++.....+..+.||-++..+. +..|..+.+|...... ...+.+..+|..+.... +..+.+||.++.+..
T Consensus 384 ~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~-~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~ 462 (543)
T 1nir_A 384 VWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGG-SLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAK 462 (543)
T ss_dssp EEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSC-CCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSC
T ss_pred EEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCC-ceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCC
Confidence 6555432457799998875332 3459988888863211 13355677887666543 458999999988753
No 69
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=67.03 E-value=74 Score=28.80 Aligned_cols=185 Identities=14% Similarity=0.079 Sum_probs=89.4
Q ss_pred CccEEEEcccccce-eecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCCC--ceEEccCCC
Q 011826 191 RNPCIICNPITGEY-VTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGGA--AWRKVGNAP 267 (476)
Q Consensus 191 ~~~~~V~NP~T~~~-~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t~--~Wr~~~~~p 267 (476)
+..++++|+.|++. ..++.... .......+++. + +++. ..+ ..+..|+. ++ .|+--....
T Consensus 14 ~~~v~~~d~~tG~~~w~~~~~~~--------~~~~~~~~~pd-G--~ilv-s~~----~~V~~~d~-~G~~~W~~~~~~~ 76 (276)
T 3no2_A 14 WNKIAIINKDTKEIVWEYPLEKG--------WECNSVAATKA-G--EILF-SYS----KGAKMITR-DGRELWNIAAPAG 76 (276)
T ss_dssp CSEEEEEETTTTEEEEEEECCTT--------CCCCEEEECTT-S--CEEE-ECB----SEEEEECT-TSCEEEEEECCTT
T ss_pred CCEEEEEECCCCeEEEEeCCCcc--------CCCcCeEECCC-C--CEEE-eCC----CCEEEECC-CCCEEEEEcCCCC
Confidence 46789999988874 44444210 00112223342 2 2333 221 35777777 55 476443110
Q ss_pred CCCccCccceEEcceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCcceeeEEeeCCeEEEEecC
Q 011826 268 WSPIAGLFPTYLNGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMNLGVLGGCLSICDVT 347 (476)
Q Consensus 268 ~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~~~L~~~~G~L~~~~~~ 347 (476)
.. .....+..||.++..... ....|+.||...+....+.+.......+. .....-...+|.+.++..
T Consensus 77 -~~-~~~~~~~~dG~~lv~~~~------~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~----~~~~v~~~~~G~~lv~~~- 143 (276)
T 3no2_A 77 -CE-MQTARILPDGNALVAWCG------HPSTILEVNMKGEVLSKTEFETGIERPHA----QFRQINKNKKGNYLVPLF- 143 (276)
T ss_dssp -CE-EEEEEECTTSCEEEEEES------TTEEEEEECTTSCEEEEEEECCSCSSGGG----SCSCCEECTTSCEEEEET-
T ss_pred -cc-ccccEECCCCCEEEEecC------CCCEEEEEeCCCCEEEEEeccCCCCcccc----cccCceECCCCCEEEEec-
Confidence 00 011234456766554321 12378999987665555555432211100 001111223566655544
Q ss_pred CCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEEec-CCEEEEEeCCCCcE-EEEE
Q 011826 348 YFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLFCK-RRALVLYNPVEKNT-RYLL 414 (476)
Q Consensus 348 ~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~~~-~~~l~~ydl~t~~~-~~v~ 414 (476)
....+..|-.+ | +..|+... ....+ -.....+|++++... +.+++.+|++|+++ -++.
T Consensus 144 ~~~~v~~~d~~--G-~~~w~~~~--~~~~~----~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 144 ATSEVREIAPN--G-QLLNSVKL--SGTPF----SSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVN 203 (276)
T ss_dssp TTTEEEEECTT--S-CEEEEEEC--SSCCC----EEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEE
T ss_pred CCCEEEEECCC--C-CEEEEEEC--CCCcc----ceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEec
Confidence 34445555543 3 45666432 11111 123456788777654 45899999996654 4444
No 70
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=65.29 E-value=85 Score=28.91 Aligned_cols=130 Identities=8% Similarity=0.036 Sum_probs=63.9
Q ss_pred EEecccceEEEeecCCCccEEEEccccc--ceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEE
Q 011826 175 IVNSCNGFLCLRKPFHRNPCIICNPITG--EYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEI 252 (476)
Q Consensus 175 ~~~s~~GLlcl~~~~~~~~~~V~NP~T~--~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eV 252 (476)
+....+|-|.+.+. ....+.++||-++ ....+.................++.+|+..+.. ++... +....+.+
T Consensus 96 ia~d~~g~l~v~d~-~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~l--yv~d~--~~~~~I~~ 170 (329)
T 3fvz_A 96 LSIDTDGNYWVTDV-ALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAV--FVSDG--YCNSRIVQ 170 (329)
T ss_dssp EEECTTSCEEEEET-TTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCE--EEEEC--SSCCEEEE
T ss_pred EEECCCCCEEEEEC-CCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeE--EEEeC--CCCCeEEE
Confidence 33445666656554 2457899998766 344443211100001112245778888743432 22221 11356778
Q ss_pred EEeCCCceEEccCCCC------CCccCccceEE--c-ceEEEEEeeccCCCCCcceEEEEECCCceE-EEEcCC
Q 011826 253 YSLGGAAWRKVGNAPW------SPIAGLFPTYL--N-GVIHWVCDDIEDDQSCSDCIVGFDFEDERF-CVIPAP 316 (476)
Q Consensus 253 yss~t~~Wr~~~~~p~------~~~~~~~~v~~--~-G~lywl~~~~~~~~~~~~~Il~fD~~~e~f-~~i~lP 316 (476)
|+.....-+.+..... ..+....++.+ + |.+|+.... ...|..||..+.++ ..+..+
T Consensus 171 ~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~-------~~~I~~~~~~~G~~~~~~~~~ 237 (329)
T 3fvz_A 171 FSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE-------NGRIQCFKTDTKEFVREIKHA 237 (329)
T ss_dssp ECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT-------TTEEEEEETTTCCEEEEECCT
T ss_pred EcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC-------CCEEEEEECCCCcEEEEEecc
Confidence 8743332222321110 01111145555 3 777776532 33899999985555 445555
No 71
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=63.00 E-value=86 Score=28.18 Aligned_cols=162 Identities=10% Similarity=-0.029 Sum_probs=92.2
Q ss_pred eEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCCCce-EEccCCCCCCccCccceEEcceEEEEEeeccCCCCCcceE
Q 011826 222 VISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGGAAW-RKVGNAPWSPIAGLFPTYLNGVIHWVCDDIEDDQSCSDCI 300 (476)
Q Consensus 222 ~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t~~W-r~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~I 300 (476)
..-|+.|++ + .+.......+...+.+++..+++= +.+..+. ..+. ......++.+|-+... ...+
T Consensus 22 ftqGL~~~~---~--~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~-~~fg-eGi~~~~~~ly~ltw~-------~~~v 87 (243)
T 3mbr_X 22 FTEGLFYLR---G--HLYESTGETGRSSVRKVDLETGRILQRAEVPP-PYFG-AGIVAWRDRLIQLTWR-------NHEG 87 (243)
T ss_dssp CEEEEEEET---T--EEEEEECCTTSCEEEEEETTTCCEEEEEECCT-TCCE-EEEEEETTEEEEEESS-------SSEE
T ss_pred ccccEEEEC---C--EEEEECCCCCCceEEEEECCCCCEEEEEeCCC-Ccce-eEEEEeCCEEEEEEee-------CCEE
Confidence 356777876 2 222333333456899999999853 3333222 1111 1234557788888754 3389
Q ss_pred EEEECCCceE-EEEcCCCCCCCCCCccCCcceeeEEeeCCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCCc--
Q 011826 301 VGFDFEDERF-CVIPAPPHFAEKPKTRDNLYDMNLGVLGGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYF-- 377 (476)
Q Consensus 301 l~fD~~~e~f-~~i~lP~~~~~~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~-- 377 (476)
..||..+-+- ..++.|.. ...|..-++.|++.+. . =.||+++-. +=....+|.....
T Consensus 88 ~v~D~~tl~~~~ti~~~~~------------Gwglt~dg~~L~vSdg--s--~~l~~iDp~----t~~~~~~I~V~~~g~ 147 (243)
T 3mbr_X 88 FVYDLATLTPRARFRYPGE------------GWALTSDDSHLYMSDG--T--AVIRKLDPD----TLQQVGSIKVTAGGR 147 (243)
T ss_dssp EEEETTTTEEEEEEECSSC------------CCEEEECSSCEEEECS--S--SEEEEECTT----TCCEEEEEECEETTE
T ss_pred EEEECCcCcEEEEEeCCCC------------ceEEeeCCCEEEEECC--C--CeEEEEeCC----CCeEEEEEEEccCCc
Confidence 9999987554 55676631 2234455677888753 2 247777632 2234455555211
Q ss_pred c--eeeEEEEecCCcEEEEe-cCCEEEEEeCCCCcE-EEEEEeeC
Q 011826 378 G--ICRPIKYLDDGSLLLFC-KRRALVLYNPVEKNT-RYLLIHED 418 (476)
Q Consensus 378 ~--~~~p~~~~~~g~il~~~-~~~~l~~ydl~t~~~-~~v~i~g~ 418 (476)
. ...-+. +.+|+|+... ....+...|++|+++ ..+...+.
T Consensus 148 ~~~~lNeLe-~~~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l 191 (243)
T 3mbr_X 148 PLDNLNELE-WVNGELLANVWLTSRIARIDPASGKVVAWIDLQAL 191 (243)
T ss_dssp ECCCEEEEE-EETTEEEEEETTTTEEEEECTTTCBEEEEEECGGG
T ss_pred ccccceeeE-EeCCEEEEEECCCCeEEEEECCCCCEEEEEECCcC
Confidence 1 111122 3477877655 457899999999986 44565543
No 72
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=61.92 E-value=86 Score=27.77 Aligned_cols=197 Identities=11% Similarity=0.012 Sum_probs=102.1
Q ss_pred EEEecccceEEEeecCCCccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEE
Q 011826 174 DIVNSCNGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIY 253 (476)
Q Consensus 174 ~~~~s~~GLlcl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVy 253 (476)
.+....+|-|.+... ....+.++||. ++...++.+.. .....++..|+.. . +...... ...+.+|
T Consensus 24 ~i~~d~~g~l~v~~~-~~~~v~~~~~~-~~~~~~~~~~~-------~~~~~~i~~~~~g-~--l~v~~~~---~~~v~~~ 88 (300)
T 2qc5_A 24 GITSSEDGKVWFTQH-KANKISSLDQS-GRIKEFEVPTP-------DAKVMCLIVSSLG-D--IWFTENG---ANKIGKL 88 (300)
T ss_dssp EEEECTTSCEEEEET-TTTEEEEECTT-SCEEEEECSST-------TCCEEEEEECTTS-C--EEEEETT---TTEEEEE
T ss_pred eeeECCCCCEEEEcC-CCCeEEEECCC-CceEEEECCCC-------CCcceeEEECCCC-C--EEEEecC---CCeEEEE
Confidence 344555777666653 23579999998 77665543221 1234566666532 2 3222221 2357777
Q ss_pred EeCCCceEEccCCCCCCccCccceEE--cceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCcce
Q 011826 254 SLGGAAWRKVGNAPWSPIAGLFPTYL--NGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYD 331 (476)
Q Consensus 254 ss~t~~Wr~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~ 331 (476)
+.. +.++.+..+... ....++.+ +|.+|..... ...|..||.. .++..+.+|..... .
T Consensus 89 d~~-g~~~~~~~~~~~--~~~~~i~~~~~g~l~v~~~~-------~~~i~~~~~~-g~~~~~~~~~~~~~---------~ 148 (300)
T 2qc5_A 89 SKK-GGFTEYPLPQPD--SGPYGITEGLNGDIWFTQLN-------GDRIGKLTAD-GTIYEYDLPNKGSY---------P 148 (300)
T ss_dssp CTT-SCEEEEECSSTT--CCEEEEEECSTTCEEEEETT-------TTEEEEECTT-SCEEEEECSSTTCC---------E
T ss_pred CCC-CCeEEecCCCCC--CCCccceECCCCCEEEEccC-------CCeEEEECCC-CCEEEccCCCCCCC---------c
Confidence 777 766655432111 11133443 5776654421 2389999998 67776666642211 2
Q ss_pred eeEEe-eCCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEEec-CCEEEEEeCCCCc
Q 011826 332 MNLGV-LGGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLFCK-RRALVLYNPVEKN 409 (476)
Q Consensus 332 ~~L~~-~~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~~~-~~~l~~ydl~t~~ 409 (476)
..+.. -+|.|++... ... .|++.+..+ .... +.++. ......-+.+..+|.+++... ...+..||+ +++
T Consensus 149 ~~i~~d~~g~l~v~~~-~~~--~i~~~~~~g---~~~~-~~~~~-~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~ 219 (300)
T 2qc5_A 149 AFITLGSDNALWFTEN-QNN--SIGRITNTG---KLEE-YPLPT-NAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGE 219 (300)
T ss_dssp EEEEECTTSSEEEEET-TTT--EEEEECTTC---CEEE-EECSS-TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC
T ss_pred eeEEECCCCCEEEEec-CCC--eEEEECCCC---cEEE-eeCCC-CCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCc
Confidence 22332 3577877764 222 355554322 2332 22211 111112234455678887764 457999999 555
Q ss_pred EEEEE
Q 011826 410 TRYLL 414 (476)
Q Consensus 410 ~~~v~ 414 (476)
+..+.
T Consensus 220 ~~~~~ 224 (300)
T 2qc5_A 220 ISEYD 224 (300)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55543
No 73
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=59.73 E-value=1.2e+02 Score=28.61 Aligned_cols=99 Identities=13% Similarity=0.079 Sum_probs=50.5
Q ss_pred ceEEEEECCCce--EEEEcCCCCCCCCCCccCCcceeeEEeeCCeEEEEecCCCCCeEEEeeccCCCCcceEE--EEEEe
Q 011826 298 DCIVGFDFEDER--FCVIPAPPHFAEKPKTRDNLYDMNLGVLGGCLSICDVTYFAPPDIWVMKDYGVQESWIK--QLSVD 373 (476)
Q Consensus 298 ~~Il~fD~~~e~--f~~i~lP~~~~~~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~--~~~I~ 373 (476)
..|..+|+.+.. ...+...... ....+...+|.+.+... .+..+.||.+.+.+....-.. ....-
T Consensus 313 g~i~vwd~~~~~~~~~~~~~~~~~----------~v~~~~~~~~~~l~s~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~ 381 (420)
T 3vl1_A 313 GMLAQWDLRSPECPVGEFLINEGT----------PINNVYFAAGALFVSSG-FDTSIKLDIISDPESERPAIEFETPTFL 381 (420)
T ss_dssp SEEEEEETTCTTSCSEEEEESTTS----------CEEEEEEETTEEEEEET-TTEEEEEEEECCTTCCSCEECTTSCEEE
T ss_pred CeEEEEEcCCCcCchhhhhccCCC----------CceEEEeCCCCEEEEec-CCccEEEEeccCCCCCccceeccCccEE
Confidence 389999998753 2333321111 12223344676555544 567899999986431110000 00000
Q ss_pred CCCcceeeEEEEecCCc----EEEEecCCEEEEEeCCC
Q 011826 374 NGYFGICRPIKYLDDGS----LLLFCKRRALVLYNPVE 407 (476)
Q Consensus 374 ~~~~~~~~p~~~~~~g~----il~~~~~~~l~~ydl~t 407 (476)
........-+.+..+|. ++.....+.+..|+++.
T Consensus 382 ~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 382 VSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp CCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred ccCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 01112223345555665 66667778888888764
No 74
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=57.47 E-value=1.4e+02 Score=28.70 Aligned_cols=183 Identities=8% Similarity=-0.003 Sum_probs=92.9
Q ss_pred ccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCCCceEEccCCCCCCc
Q 011826 192 NPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGGAAWRKVGNAPWSPI 271 (476)
Q Consensus 192 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t~~Wr~~~~~p~~~~ 271 (476)
..+++||..|++...+..... ....+.+.|.. .+ ++.... ..+...+.+++..++..+.+......
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~---------~~~~~~~spdg-~~-la~~~~-~~g~~~i~~~d~~~~~~~~l~~~~~~-- 268 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPR---------HNGAPAFSPDG-SK-LAFALS-KTGSLNLYVMDLASGQIRQVTDGRSN-- 268 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSS---------CEEEEEECTTS-SE-EEEEEC-TTSSCEEEEEETTTCCEEECCCCSSC--
T ss_pred cEEEEEECCCCcEEEeecCCC---------cccCEEEcCCC-CE-EEEEEe-cCCCceEEEEECCCCCEEeCcCCCCc--
Confidence 479999999999877654321 23456666642 33 332222 22245788889988877665533211
Q ss_pred cCccceEE--cce-EEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCcceeeEE-eeCCe-EEEEec
Q 011826 272 AGLFPTYL--NGV-IHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMNLG-VLGGC-LSICDV 346 (476)
Q Consensus 272 ~~~~~v~~--~G~-lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~~~L~-~~~G~-L~~~~~ 346 (476)
...+.+ +|. ++..... + ....|..+|+.+.+...+..... ....+. .-+|+ |++...
T Consensus 269 --~~~~~~spdg~~l~~~s~~---~--g~~~i~~~d~~~~~~~~l~~~~~-----------~~~~~~~spdG~~l~~~~~ 330 (415)
T 2hqs_A 269 --NTEPTWFPDSQNLAFTSDQ---A--GRPQVYKVNINGGAPQRITWEGS-----------QNQDADVSSDGKFMVMVSS 330 (415)
T ss_dssp --EEEEEECTTSSEEEEEECT---T--SSCEEEEEETTSSCCEECCCSSS-----------EEEEEEECTTSSEEEEEEE
T ss_pred --ccceEECCCCCEEEEEECC---C--CCcEEEEEECCCCCEEEEecCCC-----------cccCeEECCCCCEEEEEEC
Confidence 012222 465 4433322 1 12378889998876554432211 011111 12454 444443
Q ss_pred CCCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEE-EecCC---EEEEEeCCCCcEEEEE
Q 011826 347 TYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLL-FCKRR---ALVLYNPVEKNTRYLL 414 (476)
Q Consensus 347 ~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~-~~~~~---~l~~ydl~t~~~~~v~ 414 (476)
......||+++-.. .... .+... . ....+.+..+|+.++ ...+. .|+.+|++++..+.+.
T Consensus 331 -~~g~~~i~~~d~~~--~~~~---~l~~~-~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~ 394 (415)
T 2hqs_A 331 -NGGQQHIAKQDLAT--GGVQ---VLSST-F-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLP 394 (415)
T ss_dssp -CSSCEEEEEEETTT--CCEE---ECCCS-S-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECC
T ss_pred -cCCceEEEEEECCC--CCEE---EecCC-C-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEee
Confidence 22334444443222 1222 22221 1 223345677886544 43333 7999999988877664
No 75
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=57.21 E-value=1.2e+02 Score=27.80 Aligned_cols=95 Identities=8% Similarity=-0.091 Sum_probs=56.4
Q ss_pred eEEEEECCCceE-EEEcCCCCCCCCCCccCCcceeeEEeeCCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCCc
Q 011826 299 CIVGFDFEDERF-CVIPAPPHFAEKPKTRDNLYDMNLGVLGGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYF 377 (476)
Q Consensus 299 ~Il~fD~~~e~f-~~i~lP~~~~~~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~ 377 (476)
.|..+|+.+.+- ..+ +|+... .--+...+++|++... . .=.+|+.+- .+-.++.+|+....
T Consensus 76 ~v~~iD~~Tgkv~~~~-l~~~~F----------geGit~~g~~Ly~ltw-~--~~~v~V~D~----~Tl~~~~ti~~~~e 137 (268)
T 3nok_A 76 TLRQLSLESAQPVWME-RLGNIF----------AEGLASDGERLYQLTW-T--EGLLFTWSG----MPPQRERTTRYSGE 137 (268)
T ss_dssp EEEECCSSCSSCSEEE-ECTTCC----------EEEEEECSSCEEEEES-S--SCEEEEEET----TTTEEEEEEECSSC
T ss_pred EEEEEECCCCcEEeEE-CCCCcc----------eeEEEEeCCEEEEEEc-c--CCEEEEEEC----CcCcEEEEEeCCCc
Confidence 599999988766 445 665432 2225556778888765 2 234566652 34455566665422
Q ss_pred ceeeEEEEecCCc-EEEEecCCEEEEEeCCCCcE-EEEEE
Q 011826 378 GICRPIKYLDDGS-LLLFCKRRALVLYNPVEKNT-RYLLI 415 (476)
Q Consensus 378 ~~~~p~~~~~~g~-il~~~~~~~l~~ydl~t~~~-~~v~i 415 (476)
+ .++..+|+ +++......+..+|++|.++ +.+.+
T Consensus 138 G----wGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V 173 (268)
T 3nok_A 138 G----WGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQV 173 (268)
T ss_dssp C----CCEEEETTEEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred e----eEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEe
Confidence 2 23334454 44444467999999998765 44544
No 76
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=56.37 E-value=1.4e+02 Score=28.62 Aligned_cols=122 Identities=7% Similarity=0.031 Sum_probs=0.0
Q ss_pred EEecccceEEEeecCCCccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEE
Q 011826 175 IVNSCNGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYS 254 (476)
Q Consensus 175 ~~~s~~GLlcl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVys 254 (476)
.++..+|.|...+......+.+.++-......+-. .......|+.+|+..+ +|+...... ..+++++
T Consensus 208 avdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~--------~~l~~P~glavd~~~~--~lY~aD~~~---~~I~~~d 274 (400)
T 3p5b_L 208 VVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT--------ENIQWPNGITLDLLSG--RLYWVDSKL---HSISSID 274 (400)
T ss_dssp EEETTTTEEEEEECSSSCCEEEEETTSCSCEEEEC--------SSCSCEEEEEEETTTT--EEEEEETTT---TEEEEEE
T ss_pred EEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEE--------CCCCceEEEEEEeCCC--EEEEEECCC---CEEEEEe
Q ss_pred eCCCceEEccCCCCCCccCccceEEcceEEEEEeeccCCCCCcceEEEEE-CCCceEEEEcCC
Q 011826 255 LGGAAWRKVGNAPWSPIAGLFPTYLNGVIHWVCDDIEDDQSCSDCIVGFD-FEDERFCVIPAP 316 (476)
Q Consensus 255 s~t~~Wr~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~Il~fD-~~~e~f~~i~lP 316 (476)
.....-+.+...+........-...+|.+||.... ...|..+| ...+.-..+..+
T Consensus 275 ~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~~-------~~~V~~~~~~~G~~~~~i~~~ 330 (400)
T 3p5b_L 275 VNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDII-------NEAIFSANRLTGSDVNLLAEN 330 (400)
T ss_dssp TTSCCCEEEEECSSTTSSEEEEEEETTEEEEEESS-------SCSEEEEESSSCCCCEEEECS
T ss_pred CCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecCC-------CCeEEEEEcCCCCceEEEecC
No 77
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=55.74 E-value=1.2e+02 Score=27.56 Aligned_cols=109 Identities=7% Similarity=-0.072 Sum_probs=64.6
Q ss_pred ceEEEEEeeccCCCCCcceEEEEECCCceE-EEEcCCCCCCCCCCccCCcceeeEEeeCCeEEEEecCCCCCeEEEeecc
Q 011826 281 GVIHWVCDDIEDDQSCSDCIVGFDFEDERF-CVIPAPPHFAEKPKTRDNLYDMNLGVLGGCLSICDVTYFAPPDIWVMKD 359 (476)
Q Consensus 281 G~lywl~~~~~~~~~~~~~Il~fD~~~e~f-~~i~lP~~~~~~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~l~IWvl~~ 359 (476)
|.||--+.. .....|..+|+.+.+- ..+++|.... ...+...++.|++... ... .+|+.+-
T Consensus 32 g~Lyvstg~-----~~~s~v~~iD~~tg~v~~~i~l~~~~f----------geGi~~~g~~lyv~t~-~~~--~v~viD~ 93 (266)
T 2iwa_A 32 DTLFESTGL-----YGRSSVRQVALQTGKVENIHKMDDSYF----------GEGLTLLNEKLYQVVW-LKN--IGFIYDR 93 (266)
T ss_dssp TEEEEEECS-----TTTCEEEEEETTTCCEEEEEECCTTCC----------EEEEEEETTEEEEEET-TCS--EEEEEET
T ss_pred CeEEEECCC-----CCCCEEEEEECCCCCEEEEEecCCCcc----------eEEEEEeCCEEEEEEe-cCC--EEEEEEC
Confidence 566654421 1234899999987765 4567765332 2224455778888865 223 3555542
Q ss_pred CCCCcceEEEEEEeCC-CcceeeEEEEecCC-cEEEEecCCEEEEEeCCCCcE-EEEEE
Q 011826 360 YGVQESWIKQLSVDNG-YFGICRPIKYLDDG-SLLLFCKRRALVLYNPVEKNT-RYLLI 415 (476)
Q Consensus 360 ~~~~~~W~~~~~I~~~-~~~~~~p~~~~~~g-~il~~~~~~~l~~ydl~t~~~-~~v~i 415 (476)
.+-..+.+|+.+ .. ..++..+| .+++....+.+...|++|.+. +.+.+
T Consensus 94 ----~t~~v~~~i~~g~~~----g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~V 144 (266)
T 2iwa_A 94 ----RTLSNIKNFTHQMKD----GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNV 144 (266)
T ss_dssp ----TTTEEEEEEECCSSS----CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred ----CCCcEEEEEECCCCC----eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEE
Confidence 244556667664 22 23444456 566655567999999999764 44554
No 78
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=54.89 E-value=2.2e+02 Score=30.37 Aligned_cols=114 Identities=17% Similarity=0.061 Sum_probs=61.0
Q ss_pred cceEE---cceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCcceeeEEe--eCCeEEEEecCCC
Q 011826 275 FPTYL---NGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMNLGV--LGGCLSICDVTYF 349 (476)
Q Consensus 275 ~~v~~---~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~~~L~~--~~G~L~~~~~~~~ 349 (476)
.++.+ +|.|||.... ...|..+|+....-..+-. .... . ...|++ .+|.|++.+..
T Consensus 474 ~GLAvD~~~~~LY~tD~~-------~~~I~v~~ldG~~~~~l~~-~~l~-~--------P~gIaVDp~~g~LYwtD~g-- 534 (791)
T 3m0c_C 474 DGLAVDWIHSNIYWTDSV-------LGTVSVADTKGVKRKTLFR-ENGS-K--------PRAIVVDPVHGFMYWTDWG-- 534 (791)
T ss_dssp CEEEEETTTTEEEEEETT-------TTEEEEEETTSSSEEEEEE-CTTC-C--------EEEEEEETTTTEEEEEECS--
T ss_pred ceeeeeecCCcEEEEecC-------CCeEEEEeCCCCeEEEEEe-CCCC-C--------cceEEEecCCCCEEEecCC--
Confidence 44554 4699998643 3389999998765444421 1111 1 222333 46889988752
Q ss_pred CCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEe---cCCcEEEEec-CCEEEEEeCCCCcEEEEE
Q 011826 350 APPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYL---DDGSLLLFCK-RRALVLYNPVEKNTRYLL 414 (476)
Q Consensus 350 ~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~---~~g~il~~~~-~~~l~~ydl~t~~~~~v~ 414 (476)
..-.||+..-.|. . .+ ++-. ..+..|.++. .++.|++... ...|..+|+++...+.+-
T Consensus 535 ~~~~I~~~~~dG~-~--~~--~lv~--~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~ 596 (791)
T 3m0c_C 535 TPAKIKKGGLNGV-D--IY--SLVT--ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTIL 596 (791)
T ss_dssp SSCEEEEEETTSC-C--EE--EEEC--SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred CCCeEEEEecCCC-c--eE--EEEe--CCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEe
Confidence 2235666654431 1 11 1111 1233555443 2345555443 357888898877665554
No 79
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=54.32 E-value=1.3e+02 Score=27.64 Aligned_cols=105 Identities=11% Similarity=0.094 Sum_probs=56.8
Q ss_pred ceEEEEECCCceEEEEc-CCCCCCCCCCccCCcceeeEEe-eCCe-EEEEecCC-CCCeEEEeeccCCCCcceEEEEEEe
Q 011826 298 DCIVGFDFEDERFCVIP-APPHFAEKPKTRDNLYDMNLGV-LGGC-LSICDVTY-FAPPDIWVMKDYGVQESWIKQLSVD 373 (476)
Q Consensus 298 ~~Il~fD~~~e~f~~i~-lP~~~~~~~~~~~~~~~~~L~~-~~G~-L~~~~~~~-~~~l~IWvl~~~~~~~~W~~~~~I~ 373 (476)
..|..||+.+.++..+. ++...... .. ...+.- -+|+ |++... . ...+.||.++... ..+.....+.
T Consensus 233 ~~v~v~~~~~g~~~~~~~~~~~~~~~-----~~-~~~i~~spdg~~l~v~~~-~~~~~i~v~~~~~~~--g~~~~~~~~~ 303 (361)
T 3scy_A 233 GTVIAFRYADGMLDEIQTVAADTVNA-----QG-SGDIHLSPDGKYLYASNR-LKADGVAIFKVDETN--GTLTKVGYQL 303 (361)
T ss_dssp CEEEEEEEETTEEEEEEEEESCSSCC-----CC-EEEEEECTTSSEEEEEEC-SSSCEEEEEEECTTT--CCEEEEEEEE
T ss_pred CeEEEEEecCCceEEeEEEecCCCCC-----CC-cccEEECCCCCEEEEECC-CCCCEEEEEEEcCCC--CcEEEeeEec
Confidence 37899998887775542 22111111 00 112222 2465 445444 3 4679999997332 3566665555
Q ss_pred CCCcceeeEEEEecCCcEEEEe--cCCEEEE--EeCCCCcEEEE
Q 011826 374 NGYFGICRPIKYLDDGSLLLFC--KRRALVL--YNPVEKNTRYL 413 (476)
Q Consensus 374 ~~~~~~~~p~~~~~~g~il~~~--~~~~l~~--ydl~t~~~~~v 413 (476)
.+ ....-+.+..+|+.++.. ..+.+.. +|+++++++.+
T Consensus 304 ~g--~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~ 345 (361)
T 3scy_A 304 TG--IHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDI 345 (361)
T ss_dssp CS--SCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEEC
T ss_pred CC--CCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeec
Confidence 42 111235667788755543 3455544 67888887765
No 80
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=54.21 E-value=1.3e+02 Score=27.36 Aligned_cols=185 Identities=8% Similarity=-0.139 Sum_probs=88.3
Q ss_pred CccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCCCce-EEccCCC-C
Q 011826 191 RNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGGAAW-RKVGNAP-W 268 (476)
Q Consensus 191 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t~~W-r~~~~~p-~ 268 (476)
...++++|+.|++....-+... ...++.+++.. .+ ++..... ...+.+|+..++.- +.+.... .
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~~---------~~~~~~~s~dg-~~-l~v~~~~---~~~v~~~d~~~~~~~~~~~~~~~~ 133 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHNDL---------KPFGATINNTT-QT-LWFGNTV---NSAVTAIDAKTGEVKGRLVLDDRK 133 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEESS---------CCCSEEEETTT-TE-EEEEETT---TTEEEEEETTTCCEEEEEESCCCC
T ss_pred CccEEEEcCCCCeEEEEEecCC---------CcceEEECCCC-CE-EEEEecC---CCEEEEEeCCCCeeEEEEecCCCc
Confidence 3579999999987543222111 12334555543 33 3322222 24788899888753 2222211 0
Q ss_pred CC-c--cC-ccceEE--cceEEEEEeeccCCCCCcceEEEEECCCceEEE-EcCCCCCCCCCCccCCcceeeEEeeCCeE
Q 011826 269 SP-I--AG-LFPTYL--NGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCV-IPAPPHFAEKPKTRDNLYDMNLGVLGGCL 341 (476)
Q Consensus 269 ~~-~--~~-~~~v~~--~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~-i~lP~~~~~~~~~~~~~~~~~L~~~~G~L 341 (476)
.+ . .. ..++.+ +|...+++.. + ....|..+|+.+.+... ++.+..... .+.+..-+..|
T Consensus 134 ~~~~~~~~~~~~~~~s~dg~~l~~~~~---~--~~~~i~~~d~~~~~~~~~~~~~~~~~~---------~~~~s~dg~~l 199 (353)
T 3vgz_A 134 RTEEVRPLQPRELVADDATNTVYISGI---G--KESVIWVVDGGNIKLKTAIQNTGKMST---------GLALDSEGKRL 199 (353)
T ss_dssp CCSSCCCCEEEEEEEETTTTEEEEEEE---S--SSCEEEEEETTTTEEEEEECCCCTTCC---------CCEEETTTTEE
T ss_pred cccccCCCCCceEEECCCCCEEEEEec---C--CCceEEEEcCCCCceEEEecCCCCccc---------eEEECCCCCEE
Confidence 00 0 00 122333 5654444432 1 12379999998876543 342221110 22222222345
Q ss_pred EEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCC---cceeeEEEEecCCcEEEE-ec-CCEEEEEeCCCCcEE
Q 011826 342 SICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGY---FGICRPIKYLDDGSLLLF-CK-RRALVLYNPVEKNTR 411 (476)
Q Consensus 342 ~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~---~~~~~p~~~~~~g~il~~-~~-~~~l~~ydl~t~~~~ 411 (476)
++... ...+.+|-++. ......+.... .....-+.+..+|+.++. .. .+.+..||+++++..
T Consensus 200 ~~~~~--~~~i~~~d~~~------~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~ 266 (353)
T 3vgz_A 200 YTTNA--DGELITIDTAD------NKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNIL 266 (353)
T ss_dssp EEECT--TSEEEEEETTT------TEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEE
T ss_pred EEEcC--CCeEEEEECCC------CeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEE
Confidence 55433 44566655432 22233343321 112223566777764444 33 378999999888754
No 81
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=53.85 E-value=1.4e+02 Score=27.86 Aligned_cols=196 Identities=9% Similarity=-0.020 Sum_probs=95.0
Q ss_pred ecccce-EEEeecCCCccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEe
Q 011826 177 NSCNGF-LCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSL 255 (476)
Q Consensus 177 ~s~~GL-lcl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss 255 (476)
-|-+|- +.+.....+..+.|||+.|++......... ....+.|.|.. . .+....++ .+.++..
T Consensus 141 fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~---------~V~~v~fspdg-~--~l~s~s~~----~~~~~~~ 204 (365)
T 4h5i_A 141 ISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRG---------EVKDLHFSTDG-K--VVAYITGS----SLEVIST 204 (365)
T ss_dssp ECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSS---------CCCEEEECTTS-S--EEEEECSS----CEEEEET
T ss_pred EcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCC---------ceEEEEEccCC-c--eEEeccce----eEEEEEe
Confidence 344563 444444445679999999988765543221 13345566532 2 22222222 4566666
Q ss_pred CCCceEEccCCCCCCccCccc--eEEcceEEEEEeeccCCCCCcceEEEEECCCceEEEEc---CCCCCCCCCCccCCcc
Q 011826 256 GGAAWRKVGNAPWSPIAGLFP--TYLNGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIP---APPHFAEKPKTRDNLY 330 (476)
Q Consensus 256 ~t~~Wr~~~~~p~~~~~~~~~--v~~~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~---lP~~~~~~~~~~~~~~ 330 (476)
.++.-.......... ..... ..-+|.....+.. +......|..+|+......... +..... .
T Consensus 205 ~~~~~~~~~~~~~~~-~~v~~v~fspdg~~l~~~s~---d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--------~- 271 (365)
T 4h5i_A 205 VTGSCIARKTDFDKN-WSLSKINFIADDTVLIAASL---KKGKGIVLTKISIKSGNTSVLRSKQVTNRFK--------G- 271 (365)
T ss_dssp TTCCEEEEECCCCTT-EEEEEEEEEETTEEEEEEEE---SSSCCEEEEEEEEETTEEEEEEEEEEESSCS--------C-
T ss_pred ccCcceeeeecCCCC-CCEEEEEEcCCCCEEEEEec---CCcceeEEeecccccceecceeeeeecCCCC--------C-
Confidence 665433221111000 00011 1224554444433 1112224666776665544332 221111 0
Q ss_pred eeeEEe-eCCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEE-ecCCEEEEEeCCCC
Q 011826 331 DMNLGV-LGGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLF-CKRRALVLYNPVEK 408 (476)
Q Consensus 331 ~~~L~~-~~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~-~~~~~l~~ydl~t~ 408 (476)
...+.- -+|.+..+.. .+..+.||-++. .....++..++.....-+.+..+|++|+. ..++.+-.+|+.++
T Consensus 272 V~~~~~Spdg~~lasgs-~D~~V~iwd~~~------~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 272 ITSMDVDMKGELAVLAS-NDNSIALVKLKD------LSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEEEEECTTSCEEEEEE-TTSCEEEEETTT------TEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred eEeEEECCCCCceEEEc-CCCEEEEEECCC------CcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 112222 2455544443 577899998753 23344443333333345677888987765 45678888887544
No 82
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=52.89 E-value=1.7e+02 Score=28.30 Aligned_cols=127 Identities=12% Similarity=0.039 Sum_probs=69.2
Q ss_pred cceEEEEEeeccCCCCCcceEEEEECCCceEEEE---cCCCCCCCCCCccCCcc-eeeEEeeCCeEEEEecCC------C
Q 011826 280 NGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVI---PAPPHFAEKPKTRDNLY-DMNLGVLGGCLSICDVTY------F 349 (476)
Q Consensus 280 ~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i---~lP~~~~~~~~~~~~~~-~~~L~~~~G~L~~~~~~~------~ 349 (476)
+|.++|.+.. ..+..+|+.++.-..+ .+=........+.-.++ ...+..-+++|++..... .
T Consensus 237 dG~~~~vs~~--------g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~ 308 (386)
T 3sjl_D 237 AGRLVWPTYT--------GKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKT 308 (386)
T ss_dssp TTEEEEEBTT--------SEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTS
T ss_pred CCcEEEEeCC--------CEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCC
Confidence 7888897643 2799999988764332 11000000000000010 111222346888765311 1
Q ss_pred CCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCc-EEEEec--CCEEEEEeCCCCcE-EEEEEeeCCC
Q 011826 350 APPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGS-LLLFCK--RRALVLYNPVEKNT-RYLLIHEDQS 420 (476)
Q Consensus 350 ~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~-il~~~~--~~~l~~ydl~t~~~-~~v~i~g~~~ 420 (476)
..=+||+++- .++..+.+|+++. ...-+.+..+|+ .++..+ .+.+..||..++++ +.+...+.+.
T Consensus 309 ~~~~V~viD~----~t~kv~~~i~vg~--~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~~p~ 377 (386)
T 3sjl_D 309 ASRFVVVLDA----KTGERLAKFEMGH--EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGP 377 (386)
T ss_dssp CEEEEEEEET----TTCCEEEEEEEEE--EECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSSC
T ss_pred CCCEEEEEEC----CCCeEEEEEECCC--CcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCCCCc
Confidence 2368999974 4677777777641 112356677775 555533 57899999998875 4455555443
No 83
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=52.79 E-value=1.3e+02 Score=27.20 Aligned_cols=204 Identities=8% Similarity=-0.038 Sum_probs=100.8
Q ss_pred cccceEEEeecCCCccEEEEcccccce-eecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeC
Q 011826 178 SCNGFLCLRKPFHRNPCIICNPITGEY-VTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLG 256 (476)
Q Consensus 178 s~~GLlcl~~~~~~~~~~V~NP~T~~~-~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~ 256 (476)
..++.+.+... ....+.++|+.|++. ..++................++.+++..+ + ++...... ...+.+++..
T Consensus 98 ~dg~~l~v~~~-~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-~-l~~~~~~~--~~~i~~~d~~ 172 (353)
T 3vgz_A 98 NTTQTLWFGNT-VNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATN-T-VYISGIGK--ESVIWVVDGG 172 (353)
T ss_dssp TTTTEEEEEET-TTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTT-E-EEEEEESS--SCEEEEEETT
T ss_pred CCCCEEEEEec-CCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCC-E-EEEEecCC--CceEEEEcCC
Confidence 33444544443 245799999999886 33443221000001112346677887543 3 33332211 2468888887
Q ss_pred CCceE-EccCCCCCCccCccceEEcceEEEEEeeccCCCCCcceEEEEECCCceEE-EEcCCCCCCCCCCccCCcceeeE
Q 011826 257 GAAWR-KVGNAPWSPIAGLFPTYLNGVIHWVCDDIEDDQSCSDCIVGFDFEDERFC-VIPAPPHFAEKPKTRDNLYDMNL 334 (476)
Q Consensus 257 t~~Wr-~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~-~i~lP~~~~~~~~~~~~~~~~~L 334 (476)
++.=. .+......+ ..-.+.-+|...+++.. ...|..+|+.+.+.. .+..+...... ....+
T Consensus 173 ~~~~~~~~~~~~~~~--~~~~~s~dg~~l~~~~~-------~~~i~~~d~~~~~~~~~~~~~~~~~~~-------~~~~~ 236 (353)
T 3vgz_A 173 NIKLKTAIQNTGKMS--TGLALDSEGKRLYTTNA-------DGELITIDTADNKILSRKKLLDDGKEH-------FFINI 236 (353)
T ss_dssp TTEEEEEECCCCTTC--CCCEEETTTTEEEEECT-------TSEEEEEETTTTEEEEEEECCCSSSCC-------CEEEE
T ss_pred CCceEEEecCCCCcc--ceEEECCCCCEEEEEcC-------CCeEEEEECCCCeEEEEEEcCCCCCCc-------ccceE
Confidence 76422 122111001 00122235665454432 237899999887664 34553221111 12122
Q ss_pred Eee-CC-eEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCc-EEEEe-cCCEEEEEeCCCCcE
Q 011826 335 GVL-GG-CLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGS-LLLFC-KRRALVLYNPVEKNT 410 (476)
Q Consensus 335 ~~~-~G-~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~-il~~~-~~~~l~~ydl~t~~~ 410 (476)
... +| .|++... ....+.+|-++.. .....+..+. . .-+.+..+|+ +++.. .++.+..||+++++.
T Consensus 237 ~~s~dg~~l~~~~~-~~~~v~~~d~~~~------~~~~~~~~~~-~--~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~ 306 (353)
T 3vgz_A 237 SLDTARQRAFITDS-KAAEVLVVDTRNG------NILAKVAAPE-S--LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKV 306 (353)
T ss_dssp EEETTTTEEEEEES-SSSEEEEEETTTC------CEEEEEECSS-C--CCEEEETTTTEEEEEETTTTEEEEEETTTTEE
T ss_pred EECCCCCEEEEEeC-CCCEEEEEECCCC------cEEEEEEcCC-C--ceEEECCCCCEEEEEECCCCeEEEEECCCCeE
Confidence 222 34 5666554 3456777765432 2233344321 1 2245667776 45444 367899999998875
Q ss_pred EE
Q 011826 411 RY 412 (476)
Q Consensus 411 ~~ 412 (476)
..
T Consensus 307 ~~ 308 (353)
T 3vgz_A 307 VK 308 (353)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 84
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=52.29 E-value=1.6e+02 Score=28.01 Aligned_cols=188 Identities=11% Similarity=0.041 Sum_probs=97.3
Q ss_pred cceEEEeecCCCccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCCCc
Q 011826 180 NGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGGAA 259 (476)
Q Consensus 180 ~GLlcl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t~~ 259 (476)
.+.|++... ..+...++.+++...+-.. .....++.+|+..+ +|+..... ..++..++..++.
T Consensus 87 ~~~l~~~~~---~~I~~i~~~~~~~~~~~~~---------~~~~~gl~~d~~~~--~ly~~D~~---~~~I~r~~~~g~~ 149 (386)
T 3v65_B 87 EPVLLFANR---IDIRQVLPHRSEYTLLLNN---------LENAIALDFHHRRE--LVFWSDVT---LDRILRANLNGSN 149 (386)
T ss_dssp CCEEEEECB---SCEEEECTTSCCCEEEECS---------CSCEEEEEEETTTT--EEEEEETT---TTEEEEEETTSCC
T ss_pred cceeEeecC---ccceeeccCCCcEEEEecC---------CCccEEEEEecCCC--eEEEEeCC---CCcEEEEecCCCC
Confidence 555655543 3577777777665444331 12367888887554 33333222 2467777777665
Q ss_pred eEEccCCCCCCccCccceEE---cceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCcceeeEEe
Q 011826 260 WRKVGNAPWSPIAGLFPTYL---NGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMNLGV 336 (476)
Q Consensus 260 Wr~~~~~p~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~~~L~~ 336 (476)
.+.+.... . ....++.+ +|.|||.... ...|..+|+....-..+. ..... . ...++.
T Consensus 150 ~~~~~~~~-~--~~p~glavd~~~g~lY~~d~~-------~~~I~~~~~dg~~~~~l~-~~~l~-~--------P~giav 209 (386)
T 3v65_B 150 VEEVVSTG-L--ESPGGLAVDWVHDKLYWTDSG-------TSRIEVANLDGAHRKVLL-WQSLE-K--------PRAIAL 209 (386)
T ss_dssp EEEEECSS-C--SCCCCEEEETTTTEEEEEETT-------TTEEEECBTTSCSCEEEE-CSSCS-C--------EEEEEE
T ss_pred cEEEEeCC-C--CCccEEEEEeCCCeEEEEcCC-------CCeEEEEeCCCCceEEee-cCCCC-C--------CcEEEE
Confidence 55443211 0 01134433 5899998643 338999998765433332 11111 1 222333
Q ss_pred --eCCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEE--Ee-cCCcEEEEec-CCEEEEEeCCCCcE
Q 011826 337 --LGGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIK--YL-DDGSLLLFCK-RRALVLYNPVEKNT 410 (476)
Q Consensus 337 --~~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~--~~-~~g~il~~~~-~~~l~~ydl~t~~~ 410 (476)
.+|.|++++.. ..-.|++.+-.+. . .+. .+.. .+..|-+ +. .++.|++... ...+..+|+++...
T Consensus 210 dp~~g~ly~td~~--~~~~I~r~~~dG~-~--~~~-~~~~---~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~ 280 (386)
T 3v65_B 210 HPMEGTIYWTDWG--NTPRIEASSMDGS-G--RRI-IADT---HLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR 280 (386)
T ss_dssp ETTTTEEEEEECS--SSCEEEEEETTSC-S--CEE-EECS---SCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSC
T ss_pred EcCCCeEEEeccC--CCCEEEEEeCCCC-C--cEE-EEEC---CCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCee
Confidence 46888888752 2345666654431 1 111 1111 1223433 33 3445655543 45788899887654
Q ss_pred EEE
Q 011826 411 RYL 413 (476)
Q Consensus 411 ~~v 413 (476)
+.+
T Consensus 281 ~~~ 283 (386)
T 3v65_B 281 KAV 283 (386)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 85
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=52.07 E-value=1.9e+02 Score=28.89 Aligned_cols=187 Identities=10% Similarity=-0.035 Sum_probs=0.0
Q ss_pred cceEEEeecCCCccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCCCc
Q 011826 180 NGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGGAA 259 (476)
Q Consensus 180 ~GLlcl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t~~ 259 (476)
+++++.... .....|||..|++...|...+. ..+.++| +.=+++....+......+.+++..++.
T Consensus 122 ~~~~~~s~~--~~~~~l~d~~~g~~~~l~~~~~-----------~~~~~sp--DG~~la~~~~~~~~~~~i~~~d~~~g~ 186 (582)
T 3o4h_A 122 EAVVFTGAT--EDRVALYALDGGGLRELARLPG-----------FGFVSDI--RGDLIAGLGFFGGGRVSLFTSNLSSGG 186 (582)
T ss_dssp SCEEEEEEC--SSCEEEEEEETTEEEEEEEESS-----------CEEEEEE--ETTEEEEEEEEETTEEEEEEEETTTCC
T ss_pred CeEEEEecC--CCCceEEEccCCcEEEeecCCC-----------ceEEECC--CCCEEEEEEEcCCCCeEEEEEcCCCCC
Q ss_pred eEEccCCCCCCccCccceEEcceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCcceeeE-----
Q 011826 260 WRKVGNAPWSPIAGLFPTYLNGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMNL----- 334 (476)
Q Consensus 260 Wr~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~~~L----- 334 (476)
++.+......... ....-+|...+.... +... .|..+|+.+.+.. .+....... ....
T Consensus 187 ~~~l~~~~~~~~~--~~~SpDG~~l~~~~~---~~~~--~i~~~d~~~~~~~--~~~~~~~~~--------~~~~~~~~~ 249 (582)
T 3o4h_A 187 LRVFDSGEGSFSS--ASISPGMKVTAGLET---AREA--RLVTVDPRDGSVE--DLELPSKDF--------SSYRPTAIT 249 (582)
T ss_dssp CEEECCSSCEEEE--EEECTTSCEEEEEEC---SSCE--EEEEECTTTCCEE--ECCCSCSHH--------HHHCCSEEE
T ss_pred ceEeecCCCcccc--ceECCCCCEEEEccC---CCee--EEEEEcCCCCcEE--EccCCCcCh--------hhhhhcccc
Q ss_pred ---EeeCCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEEe----cCCEEEEEeCCC
Q 011826 335 ---GVLGGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLFC----KRRALVLYNPVE 407 (476)
Q Consensus 335 ---~~~~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~~----~~~~l~~ydl~t 407 (476)
..-+|.+.+... .+..+.||.+ + ...........-+.+. +|.+++.. ....++.+|.++
T Consensus 250 ~~~~spdg~~~~~~~-~~g~~~l~~~---g---------~~~~~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 250 WLGYLPDGRLAVVAR-REGRSAVFID---G---------ERVEAPQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp EEEECTTSCEEEEEE-ETTEEEEEET---T---------EEECCCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC
T ss_pred ceeEcCCCcEEEEEE-cCCcEEEEEE---C---------CeeccCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCCC
Q ss_pred CcEEEE
Q 011826 408 KNTRYL 413 (476)
Q Consensus 408 ~~~~~v 413 (476)
+.+.+
T Consensus 316 -~~~~l 320 (582)
T 3o4h_A 316 -PLLEG 320 (582)
T ss_dssp -EEECC
T ss_pred -ceEEE
No 86
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=51.21 E-value=1.5e+02 Score=27.29 Aligned_cols=201 Identities=10% Similarity=0.017 Sum_probs=92.0
Q ss_pred EEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCC--CceEEccCCCCCCc
Q 011826 194 CIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGG--AAWRKVGNAPWSPI 271 (476)
Q Consensus 194 ~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t--~~Wr~~~~~p~~~~ 271 (476)
++.+|+.|++...+..... .....+.++|.. . .++....++...-.+.+|+... +..+.+...+....
T Consensus 31 ~~~~d~~~g~~~~~~~~~~--------~~p~~l~~spdg-~-~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~ 100 (361)
T 3scy_A 31 TFRFNEETGESLPLSDAEV--------ANPSYLIPSADG-K-FVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGA 100 (361)
T ss_dssp EEEEETTTCCEEEEEEEEC--------SCCCSEEECTTS-S-EEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSS
T ss_pred EEEEeCCCCCEEEeecccC--------CCCceEEECCCC-C-EEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCC
Confidence 4445888888765543211 112234555532 2 2333333211124566666544 67766553221110
Q ss_pred cCccceEEcceEEEEEeeccCCCCCcceEEEEECCCce-EE----EEcCCCCCCCCCCccCCcceee-EE-eeCCe-EEE
Q 011826 272 AGLFPTYLNGVIHWVCDDIEDDQSCSDCIVGFDFEDER-FC----VIPAPPHFAEKPKTRDNLYDMN-LG-VLGGC-LSI 343 (476)
Q Consensus 272 ~~~~~v~~~G~lywl~~~~~~~~~~~~~Il~fD~~~e~-f~----~i~lP~~~~~~~~~~~~~~~~~-L~-~~~G~-L~~ 343 (476)
....+.++|...+.+.. ....|..||+.+.. .. .+......... ... ...... +. .-+|+ |++
T Consensus 101 -~p~~~~~dg~~l~~~~~------~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~-~~~-~~~~~~~~~~spdg~~l~~ 171 (361)
T 3scy_A 101 -DPCYLTTNGKNIVTANY------SGGSITVFPIGQDGALLPASDVIEFKGSGPDK-ERQ-TMPHLHCVRITPDGKYLLA 171 (361)
T ss_dssp -CEEEEEECSSEEEEEET------TTTEEEEEEBCTTSCBCSCSEEEECCCCCSCT-TTC-SSCCEEEEEECTTSSEEEE
T ss_pred -CcEEEEECCCEEEEEEC------CCCEEEEEEeCCCCcCcccceeEEccCCCCCc-ccc-CCCcceEEEECCCCCEEEE
Confidence 11233337775555532 12378889986432 21 11111100000 000 000111 22 22465 666
Q ss_pred EecCCCCCeEEEeeccCCCCc--c-eEEE---EEEeCCCcceeeEEEEecCCcEEEE-e-cCCEEEEEeCCCCcEEEEE
Q 011826 344 CDVTYFAPPDIWVMKDYGVQE--S-WIKQ---LSVDNGYFGICRPIKYLDDGSLLLF-C-KRRALVLYNPVEKNTRYLL 414 (476)
Q Consensus 344 ~~~~~~~~l~IWvl~~~~~~~--~-W~~~---~~I~~~~~~~~~p~~~~~~g~il~~-~-~~~~l~~ydl~t~~~~~v~ 414 (476)
... ....+.+|.++...... . .... ..+.........-+.+..+|+.++. . .++.+..||+++++++.+.
T Consensus 172 ~~~-~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~ 249 (361)
T 3scy_A 172 DDL-GTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQ 249 (361)
T ss_dssp EET-TTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEE
T ss_pred EeC-CCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeE
Confidence 554 45679999887543100 1 2221 1222221111234567788875544 4 3678999999888776554
No 87
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=49.69 E-value=2.3e+02 Score=29.03 Aligned_cols=187 Identities=14% Similarity=0.107 Sum_probs=93.9
Q ss_pred ccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcC-ccccEEEEEEeCCC-ceEEccCCCCC
Q 011826 192 NPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDD-FLNRTAEIYSLGGA-AWRKVGNAPWS 269 (476)
Q Consensus 192 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~-~~~~~~eVyss~t~-~Wr~~~~~p~~ 269 (476)
..++|||..|++...+..... .......+.+.|.. .+ |+....+. .....+.+++..++ .++.+......
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~------~~~~~~~~~~spdg-~~-l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~ 306 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEP------KEKFLTNLSWSPDE-NI-LYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDK 306 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSC------TTCEEEEEEECTTS-SE-EEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECS
T ss_pred eEEEEEECCCCceEeeccCCC------CceeEeeEEEECCC-CE-EEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCC
Confidence 469999999998766653211 01234456666643 33 32222221 12357788888888 67665421111
Q ss_pred Ccc-Cccc-eEE---cceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCcceee-EEe-eCC-eE
Q 011826 270 PIA-GLFP-TYL---NGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMN-LGV-LGG-CL 341 (476)
Q Consensus 270 ~~~-~~~~-v~~---~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~~~-L~~-~~G-~L 341 (476)
... .... .+. +|.+.+.+.. + ....|..+|........+.... .. ... +.- -+| .|
T Consensus 307 ~~~~~~~~~~~sp~~dg~~l~~~~~---~--g~~~l~~~~~~~~~~~~l~~~~--~~---------v~~~~~~spdg~~l 370 (706)
T 2z3z_A 307 HYVEPLHPLTFLPGSNNQFIWQSRR---D--GWNHLYLYDTTGRLIRQVTKGE--WE---------VTNFAGFDPKGTRL 370 (706)
T ss_dssp SCCCCCSCCEECTTCSSEEEEEECT---T--SSCEEEEEETTSCEEEECCCSS--SC---------EEEEEEECTTSSEE
T ss_pred CeECccCCceeecCCCCEEEEEEcc---C--CccEEEEEECCCCEEEecCCCC--eE---------EEeeeEEcCCCCEE
Confidence 000 0012 222 7887666543 2 2237888887777666553211 10 111 111 134 56
Q ss_pred EEEecCCC-CCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEE-ecC----CEEEEEeCCCCc
Q 011826 342 SICDVTYF-APPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLF-CKR----RALVLYNPVEKN 409 (476)
Q Consensus 342 ~~~~~~~~-~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~-~~~----~~l~~ydl~t~~ 409 (476)
++...... ....||.++-.+ .... .+... .. ...+.+..+|+.++. ... ..+..+|+++++
T Consensus 371 ~~~~~~~~~~~~~l~~~d~~~--~~~~---~l~~~-~~-~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 371 YFESTEASPLERHFYCIDIKG--GKTK---DLTPE-SG-MHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp EEEESSSCTTCBEEEEEETTC--CCCE---ESCCS-SS-EEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred EEEecCCCCceEEEEEEEcCC--CCce---eccCC-Cc-eEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 55554221 257888886433 1221 22221 11 233556677764443 222 468899998876
No 88
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=49.68 E-value=1.5e+02 Score=26.95 Aligned_cols=120 Identities=13% Similarity=0.127 Sum_probs=62.4
Q ss_pred cceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCC------C--CC--ccCCcceeeEEee--CCeEEEEecC
Q 011826 280 NGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAE------K--PK--TRDNLYDMNLGVL--GGCLSICDVT 347 (476)
Q Consensus 280 ~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~------~--~~--~~~~~~~~~L~~~--~G~L~~~~~~ 347 (476)
+|.++|.... ...|..||..+.++..+..+..... . .. ..... ...+... +|.|+++...
T Consensus 29 ~g~~l~v~~~-------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-p~gi~~~~~~g~l~v~d~~ 100 (322)
T 2fp8_A 29 TNKGFYTSVQ-------DGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGR-TYDISYNLQNNQLYIVDCY 100 (322)
T ss_dssp TCSSEEEECT-------TSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCC-EEEEEEETTTTEEEEEETT
T ss_pred CCCEEEEEcC-------CCeEEEECCCCCceEEEecccccccccccccccchhccccCCC-CceEEEcCCCCcEEEEECC
Confidence 5788887643 3389999999888877654432110 0 00 00001 2234444 5888888652
Q ss_pred CCCCeEEEeeccCCCCcceEEEEEEeCC-CcceeeEEEEec-CCcEEEEecC------------------CEEEEEeCCC
Q 011826 348 YFAPPDIWVMKDYGVQESWIKQLSVDNG-YFGICRPIKYLD-DGSLLLFCKR------------------RALVLYNPVE 407 (476)
Q Consensus 348 ~~~~l~IWvl~~~~~~~~W~~~~~I~~~-~~~~~~p~~~~~-~g~il~~~~~------------------~~l~~ydl~t 407 (476)
.. |++++..+ ...+.......+ ......-+.+.. +|.+++.... +.++.||+++
T Consensus 101 --~~--i~~~d~~~--g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~ 174 (322)
T 2fp8_A 101 --YH--LSVVGSEG--GHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPST 174 (322)
T ss_dssp --TE--EEEECTTC--EECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTT
T ss_pred --CC--EEEEeCCC--CEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCC
Confidence 22 55554322 122221111111 011112245556 7888886532 5799999998
Q ss_pred CcEEEE
Q 011826 408 KNTRYL 413 (476)
Q Consensus 408 ~~~~~v 413 (476)
++++.+
T Consensus 175 ~~~~~~ 180 (322)
T 2fp8_A 175 KETTLL 180 (322)
T ss_dssp TEEEEE
T ss_pred CEEEEe
Confidence 876654
No 89
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=49.46 E-value=2.5e+02 Score=29.32 Aligned_cols=166 Identities=14% Similarity=0.050 Sum_probs=87.4
Q ss_pred EEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCCC--c-eEEccCCCCCCccCccceEEcc-eEEEEEeeccCCCCCcce
Q 011826 224 SGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGGA--A-WRKVGNAPWSPIAGLFPTYLNG-VIHWVCDDIEDDQSCSDC 299 (476)
Q Consensus 224 ~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t~--~-Wr~~~~~p~~~~~~~~~v~~~G-~lywl~~~~~~~~~~~~~ 299 (476)
.+..+.+. +.|-++...........+.+++..++ . |+.+....... ...+.-+| .+|+.+.. + .....
T Consensus 271 ~~~~~SpD-G~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~---~~~~~~dg~~l~~~s~~---~-~~~~~ 342 (741)
T 1yr2_A 271 HGASVSSD-GRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQ---WDFVDGVGDQLWFVSGD---G-APLKK 342 (741)
T ss_dssp EEEEECTT-SCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSC---EEEEEEETTEEEEEECT---T-CTTCE
T ss_pred EEEEECCC-CCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCce---EEEEeccCCEEEEEECC---C-CCCCE
Confidence 44555443 44544443322112457778888877 7 88876433111 12233344 56666543 1 11337
Q ss_pred EEEEECCC--ceEEEEcCCCCCCCCCCccCCcceeeEEeeCCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCCc
Q 011826 300 IVGFDFED--ERFCVIPAPPHFAEKPKTRDNLYDMNLGVLGGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYF 377 (476)
Q Consensus 300 Il~fD~~~--e~f~~i~lP~~~~~~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~ 377 (476)
|...|+.+ +.|..+- |.... ....+...++.|.+... .+....||+++-.+ . ....+.....
T Consensus 343 l~~~d~~~~~~~~~~l~-~~~~~---------~l~~~~~~~~~lv~~~~-~dg~~~l~~~~~~g--~---~~~~l~~~~~ 406 (741)
T 1yr2_A 343 IVRVDLSGSTPRFDTVV-PESKD---------NLESVGIAGNRLFASYI-HDAKSQVLAFDLDG--K---PAGAVSLPGI 406 (741)
T ss_dssp EEEEECSSSSCEEEEEE-CCCSS---------EEEEEEEEBTEEEEEEE-ETTEEEEEEEETTS--C---EEEECBCSSS
T ss_pred EEEEeCCCCccccEEEe-cCCCC---------eEEEEEEECCEEEEEEE-ECCEEEEEEEeCCC--C---ceeeccCCCC
Confidence 99999988 5777653 32211 01123334778777665 45668899887433 1 2234443212
Q ss_pred ceeeEEEEecCC-cEEEEe----cCCEEEEEeCCCCcEEEE
Q 011826 378 GICRPIKYLDDG-SLLLFC----KRRALVLYNPVEKNTRYL 413 (476)
Q Consensus 378 ~~~~p~~~~~~g-~il~~~----~~~~l~~ydl~t~~~~~v 413 (476)
....-+.+..++ .+++.. .+..++.||+++++.+.+
T Consensus 407 ~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l 447 (741)
T 1yr2_A 407 GSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTPW 447 (741)
T ss_dssp CEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEEC
T ss_pred eEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEE
Confidence 222223333455 455543 246899999988775443
No 90
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=48.97 E-value=1.5e+02 Score=26.77 Aligned_cols=113 Identities=9% Similarity=0.065 Sum_probs=58.2
Q ss_pred cceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCcceeeEEe-eCCeEEEEecCC-CCCeEEEee
Q 011826 280 NGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMNLGV-LGGCLSICDVTY-FAPPDIWVM 357 (476)
Q Consensus 280 ~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~~~L~~-~~G~L~~~~~~~-~~~l~IWvl 357 (476)
+|.+||.... ...|..+|..+.++..+..+.. .. ...+.. -+|.|.++.... ...-.|+++
T Consensus 55 ~g~l~~~~~~-------~~~i~~~d~~~~~~~~~~~~~~--~~--------~~~i~~~~dg~l~v~~~~~~~~~~~i~~~ 117 (333)
T 2dg1_A 55 QGQLFLLDVF-------EGNIFKINPETKEIKRPFVSHK--AN--------PAAIKIHKDGRLFVCYLGDFKSTGGIFAA 117 (333)
T ss_dssp TSCEEEEETT-------TCEEEEECTTTCCEEEEEECSS--SS--------EEEEEECTTSCEEEEECTTSSSCCEEEEE
T ss_pred CCCEEEEECC-------CCEEEEEeCCCCcEEEEeeCCC--CC--------cceEEECCCCcEEEEeCCCCCCCceEEEE
Confidence 5787776533 2389999999888876532211 11 222332 357777775421 011245555
Q ss_pred ccCCCCcceEEEEEEe-CCCcceeeEEEEecCCcEEEEec-------CCEEEEEeCCCCcEEEE
Q 011826 358 KDYGVQESWIKQLSVD-NGYFGICRPIKYLDDGSLLLFCK-------RRALVLYNPVEKNTRYL 413 (476)
Q Consensus 358 ~~~~~~~~W~~~~~I~-~~~~~~~~p~~~~~~g~il~~~~-------~~~l~~ydl~t~~~~~v 413 (476)
+..+ ..-... +. ........-+.+..+|.+++... ...++.+|+++++++.+
T Consensus 118 d~~~--~~~~~~--~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 118 TENG--DNLQDI--IEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp CTTS--CSCEEE--ECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred eCCC--CEEEEE--EccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 4322 111111 11 11111112344556778877654 25788999888776554
No 91
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=48.14 E-value=1.8e+02 Score=27.29 Aligned_cols=206 Identities=8% Similarity=0.013 Sum_probs=98.9
Q ss_pred cceEEEeecCCCccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCCCc
Q 011826 180 NGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGGAA 259 (476)
Q Consensus 180 ~GLlcl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t~~ 259 (476)
+|-+++... .+..+.|||..+++...-...+. ..-.........+.+++.... .++. ...+ ..+.||+..++.
T Consensus 93 ~~~~l~s~s-~dg~v~vw~~~~~~~~~~~~~~~-~~~~~h~~~v~~~~~~p~~~~-~l~s-~~~d---g~i~iwd~~~~~ 165 (402)
T 2aq5_A 93 NDNVIASGS-EDCTVMVWEIPDGGLVLPLREPV-ITLEGHTKRVGIVAWHPTAQN-VLLS-AGCD---NVILVWDVGTGA 165 (402)
T ss_dssp CTTEEEEEE-TTSEEEEEECCTTCCSSCBCSCS-EEEECCSSCEEEEEECSSBTT-EEEE-EETT---SCEEEEETTTTE
T ss_pred CCCEEEEEe-CCCeEEEEEccCCCCccccCCce-EEecCCCCeEEEEEECcCCCC-EEEE-EcCC---CEEEEEECCCCC
Confidence 454433333 34679999988874321100000 000001123456667665322 2332 2322 468899988875
Q ss_pred eEEccC-CCCCCccCccceEE--cceEEEEEeeccCCCCCcceEEEEECCCceEEEE--cCCCCCCCCCCccCCcceeeE
Q 011826 260 WRKVGN-APWSPIAGLFPTYL--NGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVI--PAPPHFAEKPKTRDNLYDMNL 334 (476)
Q Consensus 260 Wr~~~~-~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i--~lP~~~~~~~~~~~~~~~~~L 334 (476)
....-. ..+.. ...++.+ +|.+...+.. ...|..+|+.+.+.... ......... .. .
T Consensus 166 ~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~-------d~~i~iwd~~~~~~~~~~~~~~~~~~~~--------~~-~ 227 (402)
T 2aq5_A 166 AVLTLGPDVHPD--TIYSVDWSRDGALICTSCR-------DKRVRVIEPRKGTVVAEKDRPHEGTRPV--------HA-V 227 (402)
T ss_dssp EEEEECTTTCCS--CEEEEEECTTSSCEEEEET-------TSEEEEEETTTTEEEEEEECSSCSSSCC--------EE-E
T ss_pred ccEEEecCCCCC--ceEEEEECCCCCEEEEEec-------CCcEEEEeCCCCceeeeeccCCCCCcce--------EE-E
Confidence 432221 11000 0022222 4544443332 23899999988765432 222111000 11 1
Q ss_pred EeeCCeEEEEec--CCCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEE-e-cCCEEEEEeCCCCc-
Q 011826 335 GVLGGCLSICDV--TYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLF-C-KRRALVLYNPVEKN- 409 (476)
Q Consensus 335 ~~~~G~L~~~~~--~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~-~-~~~~l~~ydl~t~~- 409 (476)
..-+|.+.++.. ..+..+.||-+..... =.....++. .....-+.+..+|..++. . .++.+..||+++++
T Consensus 228 ~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~---~~~~~~~~~--~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~ 302 (402)
T 2aq5_A 228 FVSEGKILTTGFSRMSERQVALWDTKHLEE---PLSLQELDT--SSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAP 302 (402)
T ss_dssp ECSTTEEEEEEECTTCCEEEEEEETTBCSS---CSEEEECCC--CSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTT
T ss_pred EcCCCcEEEEeccCCCCceEEEEcCccccC---CceEEeccC--CCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCc
Confidence 223466555542 2456799998875431 011122222 111233456677776654 3 46789999999887
Q ss_pred -EEEEEE
Q 011826 410 -TRYLLI 415 (476)
Q Consensus 410 -~~~v~i 415 (476)
+..+..
T Consensus 303 ~~~~l~~ 309 (402)
T 2aq5_A 303 FLHYLSM 309 (402)
T ss_dssp CEEEEEE
T ss_pred ceEeecc
Confidence 666653
No 92
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=47.73 E-value=1.7e+02 Score=26.98 Aligned_cols=29 Identities=21% Similarity=0.305 Sum_probs=19.9
Q ss_pred eEEEEecCCcEEEE-ecCCEEEEEeCCCCc
Q 011826 381 RPIKYLDDGSLLLF-CKRRALVLYNPVEKN 409 (476)
Q Consensus 381 ~p~~~~~~g~il~~-~~~~~l~~ydl~t~~ 409 (476)
.-+.+..+|..++. ..++.+..||+++++
T Consensus 249 ~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 278 (408)
T 4a11_B 249 NGLCFTSDGLHLLTVGTDNRMRLWNSSNGE 278 (408)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred eEEEEcCCCCEEEEecCCCeEEEEECCCCc
Confidence 33556667765554 456789999998765
No 93
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=46.54 E-value=1.7e+02 Score=26.63 Aligned_cols=170 Identities=8% Similarity=0.097 Sum_probs=84.7
Q ss_pred EEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeC-CCceEEccCC--CCCCccCccceEEcceEEEEEeeccCCCCCcce
Q 011826 223 ISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLG-GAAWRKVGNA--PWSPIAGLFPTYLNGVIHWVCDDIEDDQSCSDC 299 (476)
Q Consensus 223 ~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~-t~~Wr~~~~~--p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~ 299 (476)
..++.++|..+ ++..... ...+.+|+.. ++....+... +.......-.+.-+|...+++.. ....
T Consensus 143 ~~~~~~spdg~---l~v~~~~---~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~------~~~~ 210 (347)
T 3hfq_A 143 IHYTDLTPDNR---LAVIDLG---SDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGE------LSSQ 210 (347)
T ss_dssp EEEEEECTTSC---EEEEETT---TTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEET------TTTE
T ss_pred ceEEEECCCCc---EEEEeCC---CCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeC------CCCE
Confidence 45677777544 4333222 2478899988 6665543311 10000000112225763333322 1225
Q ss_pred EEEEECC--CceEEEE----cCCCCCCCCCCccCCcceeeEE-eeCCe-EEEEecCCCCCeEEEeeccCCCCcceEEEEE
Q 011826 300 IVGFDFE--DERFCVI----PAPPHFAEKPKTRDNLYDMNLG-VLGGC-LSICDVTYFAPPDIWVMKDYGVQESWIKQLS 371 (476)
Q Consensus 300 Il~fD~~--~e~f~~i----~lP~~~~~~~~~~~~~~~~~L~-~~~G~-L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~ 371 (476)
|..||+. +.++..+ ..|...... .....+. .-+|+ |++... ....+.+|.++..+ .+.....
T Consensus 211 v~v~~~~~~~g~~~~~~~~~~~~~~~~~~------~~~~~i~~spdG~~l~v~~~-~~~~v~v~~~~~~g---~~~~~~~ 280 (347)
T 3hfq_A 211 IASLKYDTQTGAFTQLGIVKTIPADYTAH------NGAAAIRLSHDGHFLYVSNR-GYNTLAVFAVTADG---HLTLIQQ 280 (347)
T ss_dssp EEEEEEETTTTEEEEEEEEESSCTTCCSC------CEEEEEEECTTSCEEEEEEE-TTTEEEEEEECGGG---CEEEEEE
T ss_pred EEEEEecCCCCceEEeeeeeecCCCCCCC------CcceeEEECCCCCEEEEEeC-CCCEEEEEEECCCC---cEEEeEE
Confidence 6666654 4665443 233321111 0011222 22465 556554 46779999987532 4566556
Q ss_pred EeCCCcceeeEEEEecCCcEEEE-ec-CCEEEEE--eCCCCcEEEEEE
Q 011826 372 VDNGYFGICRPIKYLDDGSLLLF-CK-RRALVLY--NPVEKNTRYLLI 415 (476)
Q Consensus 372 I~~~~~~~~~p~~~~~~g~il~~-~~-~~~l~~y--dl~t~~~~~v~i 415 (476)
+..... ...-+.+..+|+.++. .. .+.+..| |.++++++.+.-
T Consensus 281 ~~~~~~-~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~~~~ 327 (347)
T 3hfq_A 281 ISTEGD-FPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSLLQK 327 (347)
T ss_dssp EECSSS-CCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEE
T ss_pred EecCCC-CcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEeccc
Confidence 654211 1134567788875544 33 3566666 888888887763
No 94
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=46.07 E-value=2.5e+02 Score=29.42 Aligned_cols=66 Identities=12% Similarity=0.137 Sum_probs=35.5
Q ss_pred CeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEE-ecCCEEEEEeCCC
Q 011826 339 GCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLF-CKRRALVLYNPVE 407 (476)
Q Consensus 339 G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~-~~~~~l~~ydl~t 407 (476)
|.+.++.. .+..+.||-+.... ..+...............-+.+..+|..++. ..++.+..||+++
T Consensus 219 ~~~l~s~s-~Dg~I~iwd~~~~~--~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 219 RSYLASVS-QDRTCIIWTQDNEQ--GPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp SEEEEEEE-SSSCEEEEEESSSS--SCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred CCEEEEEe-cCCEEEEecCCCCC--CcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 55555444 56789999987642 2222211000011112223456677765554 4567899999884
No 95
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=45.93 E-value=1.7e+02 Score=26.54 Aligned_cols=139 Identities=25% Similarity=0.221 Sum_probs=71.1
Q ss_pred ccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCC---CceEEccCCCC
Q 011826 192 NPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGG---AAWRKVGNAPW 268 (476)
Q Consensus 192 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t---~~Wr~~~~~p~ 268 (476)
..+++++|.+++...+... .....++.+++..+ .++..... ..++.+|+..+ +..+.+...+.
T Consensus 165 g~v~~~d~~~~~~~~~~~~---------~~~p~gia~~~dg~--~lyv~d~~---~~~I~~~~~~~~~~~~~~~~~~~~g 230 (322)
T 2fp8_A 165 GRLIKYDPSTKETTLLLKE---------LHVPGGAEVSADSS--FVLVAEFL---SHQIVKYWLEGPKKGTAEVLVKIPN 230 (322)
T ss_dssp EEEEEEETTTTEEEEEEEE---------ESCCCEEEECTTSS--EEEEEEGG---GTEEEEEESSSTTTTCEEEEEECSS
T ss_pred ceEEEEeCCCCEEEEeccC---------CccCcceEECCCCC--EEEEEeCC---CCeEEEEECCCCcCCccceEEeCCC
Confidence 4688889988876544321 01123455555321 22222111 24677787765 34444332221
Q ss_pred CCccCccceEE--cceEEEEEeecc-CCC---CCcceEEEEECCCceEEEEcCCCCCCCCCCccCCcceeeEEeeCCeEE
Q 011826 269 SPIAGLFPTYL--NGVIHWVCDDIE-DDQ---SCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMNLGVLGGCLS 342 (476)
Q Consensus 269 ~~~~~~~~v~~--~G~lywl~~~~~-~~~---~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~~~L~~~~G~L~ 342 (476)
..++.+ +|. .|++.... ... .....|..||...+....+..|...... ....+..-+|.|+
T Consensus 231 -----P~gi~~d~~G~-l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~-------~~~~~~~~~g~L~ 297 (322)
T 2fp8_A 231 -----PGNIKRNADGH-FWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGE-------HFEQIQEHDGLLY 297 (322)
T ss_dssp -----EEEEEECTTSC-EEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTS-------CCCEEEEETTEEE
T ss_pred -----CCCeEECCCCC-EEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccc-------cceEEEEeCCEEE
Confidence 133444 466 56664310 000 0123799999988888888888643211 1222344578888
Q ss_pred EEecCCCCCeEEEeec
Q 011826 343 ICDVTYFAPPDIWVMK 358 (476)
Q Consensus 343 ~~~~~~~~~l~IWvl~ 358 (476)
+... ....+.+..++
T Consensus 298 v~~~-~~~~i~~~~~~ 312 (322)
T 2fp8_A 298 IGTL-FHGSVGILVYD 312 (322)
T ss_dssp EECS-SCSEEEEEEC-
T ss_pred Eeec-CCCceEEEecc
Confidence 8865 34445555554
No 96
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=45.66 E-value=46 Score=26.02 Aligned_cols=42 Identities=7% Similarity=0.108 Sum_probs=29.7
Q ss_pred cEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEE
Q 011826 193 PCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVF 242 (476)
Q Consensus 193 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~ 242 (476)
.+++.+|.|+.|. |.... .....+.+..|...+.|+|+....
T Consensus 12 ~V~~~d~~~~~W~--p~~~~------~g~s~V~~~~d~~~~~yrIv~~~l 53 (112)
T 1evh_A 12 AVMVYDDANKKWV--PAGGS------TGFSRVHIYHHTGNNTFRVVGRKI 53 (112)
T ss_dssp EEEEEETTTTEEE--EGGGC------CSCEEEEEEEETTTTEEEEEEEET
T ss_pred EEEEEcCCCCceE--ECCCC------CCceEEEEEEECCCCEEEEEEEEC
Confidence 5889999999774 43210 122457888998889999998754
No 97
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=45.61 E-value=1.7e+02 Score=26.31 Aligned_cols=185 Identities=10% Similarity=0.001 Sum_probs=90.5
Q ss_pred CccEEEEcc-cccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCCCc-------eEE
Q 011826 191 RNPCIICNP-ITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGGAA-------WRK 262 (476)
Q Consensus 191 ~~~~~V~NP-~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t~~-------Wr~ 262 (476)
+..+.|||. .+++...+..... ......+.+.+ +.+ ++ ....+ ..+.+|+..+.. .+.
T Consensus 78 dg~i~~wd~~~~~~~~~~~~~~~-------~~~v~~l~~~~--~~~-l~-s~~~d---~~i~iwd~~~~~~~~~~~~~~~ 143 (342)
T 1yfq_A 78 QGEILKVDLIGSPSFQALTNNEA-------NLGICRICKYG--DDK-LI-AASWD---GLIEVIDPRNYGDGVIAVKNLN 143 (342)
T ss_dssp TSCEEEECSSSSSSEEECBSCCC-------CSCEEEEEEET--TTE-EE-EEETT---SEEEEECHHHHTTBCEEEEESC
T ss_pred CCeEEEEEeccCCceEeccccCC-------CCceEEEEeCC--CCE-EE-EEcCC---CeEEEEcccccccccccccCCe
Confidence 467999999 9988766654111 12345667777 333 22 22222 467777765400 111
Q ss_pred ccCCCCCCccCc-cceEEcceEEEEEeeccCCCCCcceEEEEECCC-ce--EEEEcCCCCCCCCCCccCCcceeeEEee-
Q 011826 263 VGNAPWSPIAGL-FPTYLNGVIHWVCDDIEDDQSCSDCIVGFDFED-ER--FCVIPAPPHFAEKPKTRDNLYDMNLGVL- 337 (476)
Q Consensus 263 ~~~~p~~~~~~~-~~v~~~G~lywl~~~~~~~~~~~~~Il~fD~~~-e~--f~~i~lP~~~~~~~~~~~~~~~~~L~~~- 337 (476)
+.... .... .++.+++.....+.. ...|..+|+.+ .. ......+.... ...+.-.
T Consensus 144 ~~~~~---~~~~v~~~~~~~~~l~~~~~-------d~~i~i~d~~~~~~~~~~~~~~~~~~~----------i~~i~~~~ 203 (342)
T 1yfq_A 144 SNNTK---VKNKIFTMDTNSSRLIVGMN-------NSQVQWFRLPLCEDDNGTIEESGLKYQ----------IRDVALLP 203 (342)
T ss_dssp SSSSS---SCCCEEEEEECSSEEEEEES-------TTEEEEEESSCCTTCCCEEEECSCSSC----------EEEEEECS
T ss_pred eeEEe---eCCceEEEEecCCcEEEEeC-------CCeEEEEECCccccccceeeecCCCCc----------eeEEEECC
Confidence 11111 1111 333344333222221 23899999987 32 33333322111 1222222
Q ss_pred -CCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCC--------cceeeEEEEecCCcEEEE-ecCCEEEEEeCCC
Q 011826 338 -GGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGY--------FGICRPIKYLDDGSLLLF-CKRRALVLYNPVE 407 (476)
Q Consensus 338 -~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~--------~~~~~p~~~~~~g~il~~-~~~~~l~~ydl~t 407 (476)
+|.+.++.. .+..+.||.++..+..........+.... .....-+.+..+|.+|+. ..++.+..||+++
T Consensus 204 ~~~~~l~~~~-~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~ 282 (342)
T 1yfq_A 204 KEQEGYACSS-IDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQT 282 (342)
T ss_dssp GGGCEEEEEE-TTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTT
T ss_pred CCCCEEEEEe-cCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCcc
Confidence 355544444 46789999987652111111222222210 012234556677765554 4567899999998
Q ss_pred CcE
Q 011826 408 KNT 410 (476)
Q Consensus 408 ~~~ 410 (476)
++.
T Consensus 283 ~~~ 285 (342)
T 1yfq_A 283 RKK 285 (342)
T ss_dssp TEE
T ss_pred HhH
Confidence 764
No 98
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=45.61 E-value=1.2e+02 Score=31.80 Aligned_cols=28 Identities=11% Similarity=0.097 Sum_probs=18.9
Q ss_pred EcceEEEEEeeccCCCCCcceEEEEECCCceEEEE
Q 011826 279 LNGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVI 313 (476)
Q Consensus 279 ~~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i 313 (476)
.+|.|||.... ...|..+|+....-..+
T Consensus 463 ~~g~LY~tD~~-------~~~I~v~d~dg~~~~~l 490 (699)
T 1n7d_A 463 IHSNIYWTDSV-------LGTVSVADTKGVKRKTL 490 (699)
T ss_dssp SSSBCEECCTT-------TSCEEEEBSSSCCEEEE
T ss_pred eCCcEEEEecc-------CCeEEEEecCCCceEEE
Confidence 35899996432 33799999887654443
No 99
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=45.38 E-value=2.2e+02 Score=27.62 Aligned_cols=108 Identities=7% Similarity=-0.021 Sum_probs=56.5
Q ss_pred ccceEEEeecCCCccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCcc-ccEEEEEEeCC
Q 011826 179 CNGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFL-NRTAEIYSLGG 257 (476)
Q Consensus 179 ~~GLlcl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~-~~~~eVyss~t 257 (476)
.+|.|.+.+.. ..+.+++|.+++...+.... ....++.+|+..+ ++........ ...+..++. .
T Consensus 151 ~~g~Lyv~D~~--~~I~~id~~~g~v~~~~~~~---------~~P~giavd~dG~---lyVad~~~~~~~~gv~~~~~-~ 215 (433)
T 4hw6_A 151 NYDDLYWVGQR--DAFRHVDFVNQYVDIKTTNI---------GQCADVNFTLNGD---MVVVDDQSSDTNTGIYLFTR-A 215 (433)
T ss_dssp TTCEEEEECBT--SCEEEEETTTTEEEEECCCC---------SCEEEEEECTTCC---EEEEECCSCTTSEEEEEECG-G
T ss_pred CCCEEEEEeCC--CCEEEEECCCCEEEEeecCC---------CCccEEEECCCCC---EEEEcCCCCcccceEEEEEC-C
Confidence 35877777653 67899999888877765421 1356777777544 4433221111 112222222 2
Q ss_pred CceEEccCCCCCCccCccceEE---cceEEEEEeeccCCCCCcceEEEEECCCceE
Q 011826 258 AAWRKVGNAPWSPIAGLFPTYL---NGVIHWVCDDIEDDQSCSDCIVGFDFEDERF 310 (476)
Q Consensus 258 ~~Wr~~~~~p~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f 310 (476)
+.|......+. .....++.+ +|.||+.... ...|..||..+.+.
T Consensus 216 ~~~~~~~~~~~--~~~P~giavd~~~G~lyv~d~~-------~~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 216 SGFTERLSLCN--ARGAKTCAVHPQNGKIYYTRYH-------HAMISSYDPATGTL 262 (433)
T ss_dssp GTTCCEEEEEE--CSSBCCCEECTTTCCEEECBTT-------CSEEEEECTTTCCE
T ss_pred CCeeccccccc--cCCCCEEEEeCCCCeEEEEECC-------CCEEEEEECCCCeE
Confidence 33321000000 111134444 6888876432 33899999986665
No 100
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=45.26 E-value=2.8e+02 Score=28.65 Aligned_cols=192 Identities=11% Similarity=0.010 Sum_probs=97.6
Q ss_pred cEEEEcccccce--eecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCCCceEEccCCCCCC
Q 011826 193 PCIICNPITGEY--VTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGGAAWRKVGNAPWSP 270 (476)
Q Consensus 193 ~~~V~NP~T~~~--~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t~~Wr~~~~~p~~~ 270 (476)
.+++++.-|++. +.+-..+. . .....+..+++. +.|-++...... ....+.+.+..++.|+.+......
T Consensus 203 ~v~~~~l~t~~~~~~lv~~~~~-----~-~~~~~~~~~SpD-G~~l~~~~~~~~-~~~~l~~~~~~~~~~~~l~~~~~~- 273 (695)
T 2bkl_A 203 TIRYHTLGTEPSKDTVVHERTG-----D-PTTFLQSDLSRD-GKYLFVYILRGW-SENDVYWKRPGEKDFRLLVKGVGA- 273 (695)
T ss_dssp EEEEEETTSCGGGCEEEECCCC-----C-TTCEEEEEECTT-SCCEEEEEEETT-TEEEEEEECTTCSSCEEEEECSSC-
T ss_pred EEEEEECCCCchhceEEEecCC-----C-CEEEEEEEECCC-CCEEEEEEeCCC-CceEEEEEcCCCCceEEeecCCCc-
Confidence 489999988763 22222110 0 112345556654 355444433321 223455555556788877643311
Q ss_pred ccCccceEEcceEEEEEeeccCCCCCcceEEEEECCCce---EEEEcCCCCCCCCCCccCCcceeeEEeeCCeEEEEecC
Q 011826 271 IAGLFPTYLNGVIHWVCDDIEDDQSCSDCIVGFDFEDER---FCVIPAPPHFAEKPKTRDNLYDMNLGVLGGCLSICDVT 347 (476)
Q Consensus 271 ~~~~~~v~~~G~lywl~~~~~~~~~~~~~Il~fD~~~e~---f~~i~lP~~~~~~~~~~~~~~~~~L~~~~G~L~~~~~~ 347 (476)
....+..+|.+|..+.. ......|..+|+.+.. |..+-.+.... ....+...+|.|.+...
T Consensus 274 --~~~~~~~~g~l~~~s~~----~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~---------~l~~~~~~~~~lv~~~~- 337 (695)
T 2bkl_A 274 --KYEVHAWKDRFYVLTDE----GAPRQRVFEVDPAKPARASWKEIVPEDSSA---------SLLSVSIVGGHLSLEYL- 337 (695)
T ss_dssp --CEEEEEETTEEEEEECT----TCTTCEEEEEBTTBCSGGGCEEEECCCSSC---------EEEEEEEETTEEEEEEE-
T ss_pred --eEEEEecCCcEEEEECC----CCCCCEEEEEeCCCCCccCCeEEecCCCCC---------eEEEEEEECCEEEEEEE-
Confidence 11344467775554432 1123489999997644 66653332111 01223334788877665
Q ss_pred CCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCC-cEEEEe----cCCEEEEEeCCCCcEEEEE
Q 011826 348 YFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDG-SLLLFC----KRRALVLYNPVEKNTRYLL 414 (476)
Q Consensus 348 ~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g-~il~~~----~~~~l~~ydl~t~~~~~v~ 414 (476)
.+....||+++-.+ . ....+.........-+.+..++ .+++.. .+..++.||+++++.+.+.
T Consensus 338 ~dg~~~l~~~~~~g--~---~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l~ 404 (695)
T 2bkl_A 338 KDATSEVRVATLKG--K---PVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSELWA 404 (695)
T ss_dssp ETTEEEEEEEETTC--C---EEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEEEE
T ss_pred ECCEEEEEEEeCCC--C---eeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEe
Confidence 45678899887433 1 2233443211111112223455 444443 2367999999988766554
No 101
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=45.23 E-value=1.8e+02 Score=26.36 Aligned_cols=190 Identities=7% Similarity=-0.014 Sum_probs=86.0
Q ss_pred CccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCCCceEEccCCCCCC
Q 011826 191 RNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGGAAWRKVGNAPWSP 270 (476)
Q Consensus 191 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t~~Wr~~~~~p~~~ 270 (476)
+..+.|||..+++...+.... .....+.+.+.. +.+.+.....+ -.+.+|+..++.-...-..+.
T Consensus 107 dg~v~iwd~~~~~~~~~~~~~---------~~v~~~~~~~~~-~~~~l~~~~~d---g~i~vwd~~~~~~~~~~~~~~-- 171 (368)
T 3mmy_A 107 DKTAKMWDLSSNQAIQIAQHD---------APVKTIHWIKAP-NYSCVMTGSWD---KTLKFWDTRSSNPMMVLQLPE-- 171 (368)
T ss_dssp TSEEEEEETTTTEEEEEEECS---------SCEEEEEEEECS-SCEEEEEEETT---SEEEEECSSCSSCSEEEECSS--
T ss_pred CCcEEEEEcCCCCceeecccc---------CceEEEEEEeCC-CCCEEEEccCC---CcEEEEECCCCcEEEEEecCC--
Confidence 457999999998877654321 123445553222 23333333333 468888887764211111110
Q ss_pred ccCccceEEcceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCcceeeEEeeCCe--EEEEecCC
Q 011826 271 IAGLFPTYLNGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMNLGVLGGC--LSICDVTY 348 (476)
Q Consensus 271 ~~~~~~v~~~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~~~L~~~~G~--L~~~~~~~ 348 (476)
....+...+....++.. ...+..+|+.+..-............ .....+...... -.++....
T Consensus 172 --~~~~~~~~~~~~~~~~~-------~~~i~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 236 (368)
T 3mmy_A 172 --RCYCADVIYPMAVVATA-------ERGLIVYQLENQPSEFRRIESPLKHQ------HRCVAIFKDKQNKPTGFALGSI 236 (368)
T ss_dssp --CEEEEEEETTEEEEEEG-------GGCEEEEECSSSCEEEEECCCSCSSC------EEEEEEEECTTSCEEEEEEEET
T ss_pred --CceEEEecCCeeEEEeC-------CCcEEEEEeccccchhhhccccccCC------CceEEEcccCCCCCCeEEEecC
Confidence 01122222333333322 23688888876544333222211111 001111111111 11222224
Q ss_pred CCCeEEEeeccCCC-CcceEEEEEEeCC----Cc---ceeeEEEEecCCcEEEE-ecCCEEEEEeCCCCcE
Q 011826 349 FAPPDIWVMKDYGV-QESWIKQLSVDNG----YF---GICRPIKYLDDGSLLLF-CKRRALVLYNPVEKNT 410 (476)
Q Consensus 349 ~~~l~IWvl~~~~~-~~~W~~~~~I~~~----~~---~~~~p~~~~~~g~il~~-~~~~~l~~ydl~t~~~ 410 (476)
+..+.||-++.... .........-... .. ....-+.+..+|.+++. ..++.+..||+++++.
T Consensus 237 dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~ 307 (368)
T 3mmy_A 237 EGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTK 307 (368)
T ss_dssp TSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEE
T ss_pred CCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcE
Confidence 67899998875421 1111111000000 00 01233456667765554 4677899999998754
No 102
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=44.09 E-value=2.3e+02 Score=27.43 Aligned_cols=112 Identities=8% Similarity=0.063 Sum_probs=60.4
Q ss_pred ccceEEEeecCCCccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCcc-ccEEEEEEeCC
Q 011826 179 CNGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFL-NRTAEIYSLGG 257 (476)
Q Consensus 179 ~~GLlcl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~-~~~~eVyss~t 257 (476)
.+|.|.+.+.. ..+.++++.+++...+-... ....++.+|+..+ .|++....... ...+.+++. .
T Consensus 148 ~~g~Lyv~d~~--~~I~~id~~~~~v~~~~~~~---------~~P~~ia~d~~G~--~lyvad~~~~~~~~~v~~~~~-~ 213 (430)
T 3tc9_A 148 NHNHLYLVGEQ--HPTRLIDFEKEYVSTVYSGL---------SKVRTICWTHEAD--SMIITNDQNNNDRPNNYILTR-E 213 (430)
T ss_dssp EEEEEEEEEBT--EEEEEEETTTTEEEEEECCC---------SCEEEEEECTTSS--EEEEEECCSCTTSEEEEEEEG-G
T ss_pred CCCeEEEEeCC--CcEEEEECCCCEEEEEecCC---------CCcceEEEeCCCC--EEEEEeCCCCcccceEEEEeC-C
Confidence 46777666643 67888999888766654311 1346777776543 33333322111 123333443 3
Q ss_pred CceE---EccCCCCCCccCccceEE---cceEEEEEeeccCCCCCcceEEEEECCCceEE-EEcCC
Q 011826 258 AAWR---KVGNAPWSPIAGLFPTYL---NGVIHWVCDDIEDDQSCSDCIVGFDFEDERFC-VIPAP 316 (476)
Q Consensus 258 ~~Wr---~~~~~p~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~-~i~lP 316 (476)
+.|. .+.. .....++.+ +|.+|+.... ...|..||+.+.... ...++
T Consensus 214 g~~~~~~~l~~-----~~~p~giavdp~~g~lyv~d~~-------~~~V~~~~~~~~~~~~~~~~~ 267 (430)
T 3tc9_A 214 SGFKVITELTK-----GQNCNGAETHPINGELYFNSWN-------AGQVFRYDFTTQETTPLFTIQ 267 (430)
T ss_dssp GTSCSEEEEEE-----CSSCCCEEECTTTCCEEEEETT-------TTEEEEEETTTTEEEEEEECS
T ss_pred Cceeeeeeecc-----CCCceEEEEeCCCCEEEEEECC-------CCEEEEEECCCCcEEEEEEcC
Confidence 4443 2221 111144444 6888886543 348999999887763 33444
No 103
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=43.92 E-value=3.1e+02 Score=28.79 Aligned_cols=200 Identities=9% Similarity=-0.041 Sum_probs=96.8
Q ss_pred cccceEEEeecCCCccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCC
Q 011826 178 SCNGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGG 257 (476)
Q Consensus 178 s~~GLlcl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t 257 (476)
..+|-|.+... ...++++||.++++..+..+.. .......++..|... . +.+.... ..+..|+..+
T Consensus 371 d~~g~lWigt~--~~Gl~~~~~~~~~~~~~~~~~~-----~~~~~v~~i~~d~~g-~---lWigt~~---~Gl~~~~~~~ 436 (781)
T 3v9f_A 371 DGQGKLWIGTD--GGGINVFENGKRVAIYNKENRE-----LLSNSVLCSLKDSEG-N---LWFGTYL---GNISYYNTRL 436 (781)
T ss_dssp CTTSCEEEEEB--SSCEEEEETTEEEEECC----------CCCSBEEEEEECTTS-C---EEEEETT---EEEEEECSSS
T ss_pred cCCCCEEEEeC--CCcEEEEECCCCeEEEccCCCC-----CCCcceEEEEECCCC-C---EEEEecc---CCEEEEcCCC
Confidence 34565555542 2358999999988766532111 011234455555422 1 2222221 3577788888
Q ss_pred CceEEccCCCCCCccCccceEEc--ceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCcceeeE-
Q 011826 258 AAWRKVGNAPWSPIAGLFPTYLN--GVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMNL- 334 (476)
Q Consensus 258 ~~Wr~~~~~p~~~~~~~~~v~~~--G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~~~L- 334 (476)
+.++..... ........+++.+ |. .|++.. ..|..||..+++|..+.......... .. ...+
T Consensus 437 ~~~~~~~~~-~~~~~~v~~i~~d~~g~-lwigt~--------~Gl~~~~~~~~~~~~~~~~~~~~~~~----~~-i~~i~ 501 (781)
T 3v9f_A 437 KKFQIIELE-KNELLDVRVFYEDKNKK-IWIGTH--------AGVFVIDLASKKVIHHYDTSNSQLLE----NF-VRSIA 501 (781)
T ss_dssp CEEEECCST-TTCCCCEEEEEECTTSE-EEEEET--------TEEEEEESSSSSCCEEECTTTSSCSC----SC-EEEEE
T ss_pred CcEEEeccC-CCCCCeEEEEEECCCCC-EEEEEC--------CceEEEeCCCCeEEecccCccccccc----ce-eEEEE
Confidence 888877543 1111111334443 44 566532 27999999999987764332110000 01 1222
Q ss_pred EeeCCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCC-CcceeeEEEEecCCcEEEEecCCEE-EEEeCCCCcEEE
Q 011826 335 GVLGGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNG-YFGICRPIKYLDDGSLLLFCKRRAL-VLYNPVEKNTRY 412 (476)
Q Consensus 335 ~~~~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~-~~~~~~p~~~~~~g~il~~~~~~~l-~~ydl~t~~~~~ 412 (476)
...+|.|.+... ... |..++... ..+.... ...+ ......-+....+|.|.+... ..+ +.||+++++++.
T Consensus 502 ~d~~g~lWigt~--~~G--l~~~~~~~--~~~~~~~-~~~~l~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d~~~~~~~~ 573 (781)
T 3v9f_A 502 QDSEGRFWIGTF--GGG--VGIYTPDM--QLVRKFN-QYEGFCSNTINQIYRSSKGQMWLATG-EGLVCFPSARNFDYQV 573 (781)
T ss_dssp ECTTCCEEEEES--SSC--EEEECTTC--CEEEEEC-TTTTCSCSCEEEEEECTTSCEEEEET-TEEEEESCTTTCCCEE
T ss_pred EcCCCCEEEEEc--CCC--EEEEeCCC--CeEEEcc-CCCCCCCCeeEEEEECCCCCEEEEEC-CCceEEECCCCCcEEE
Confidence 233466666553 122 23332211 2333211 0100 011112222334678887766 667 999999888766
Q ss_pred EE
Q 011826 413 LL 414 (476)
Q Consensus 413 v~ 414 (476)
+.
T Consensus 574 ~~ 575 (781)
T 3v9f_A 574 FQ 575 (781)
T ss_dssp EC
T ss_pred cc
Confidence 53
No 104
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=43.25 E-value=2e+02 Score=26.48 Aligned_cols=57 Identities=7% Similarity=-0.022 Sum_probs=33.6
Q ss_pred CccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCCCc
Q 011826 191 RNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGGAA 259 (476)
Q Consensus 191 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t~~ 259 (476)
++.+.|||..+++....-.... ....+.+.+...+-+++.....+ ..+.+|+..++.
T Consensus 121 d~~i~iwd~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~d~~~~~ 177 (408)
T 4a11_B 121 DKTLKVWDTNTLQTADVFNFEE---------TVYSHHMSPVSTKHCLVAVGTRG---PKVQLCDLKSGS 177 (408)
T ss_dssp TSEEEEEETTTTEEEEEEECSS---------CEEEEEECSSCSSCCEEEEEESS---SSEEEEESSSSC
T ss_pred CCeEEEeeCCCCccceeccCCC---------ceeeeEeecCCCCCcEEEEEcCC---CeEEEEeCCCcc
Confidence 4579999999887654433221 23445555554444444444433 468888887763
No 105
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=43.12 E-value=1.8e+02 Score=25.87 Aligned_cols=197 Identities=11% Similarity=0.060 Sum_probs=95.1
Q ss_pred CccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCCCceEEc-cCCC-C
Q 011826 191 RNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGGAAWRKV-GNAP-W 268 (476)
Q Consensus 191 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t~~Wr~~-~~~p-~ 268 (476)
...++++||.+++...+..+.. . .......++.+|+..+ +++.... . ..+.+|+.. +..+.+ .... .
T Consensus 45 ~~~i~~~d~~~g~~~~~~~~~~-~---~~~~~~~~i~~~~~~g--~l~v~~~-~---~~l~~~d~~-g~~~~~~~~~~~~ 113 (314)
T 1pjx_A 45 AGEILRIDLKTGKKTVICKPEV-N---GYGGIPAGCQCDRDAN--QLFVADM-R---LGLLVVQTD-GTFEEIAKKDSEG 113 (314)
T ss_dssp CCEEEEECTTTCCEEEEECCEE-T---TEECCEEEEEECSSSS--EEEEEET-T---TEEEEEETT-SCEEECCSBCTTS
T ss_pred CCEEEEEeCCCCcEEEEEeccc-C---CCCCCCceEEEecCCC--cEEEEEC-C---CCEEEEeCC-CCEEEEEeccCCC
Confidence 3569999999998876543110 0 0112345677776422 2332222 1 257788887 776655 3211 1
Q ss_pred CCccCccceEE--cceEEEEEeecc--------CCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCcceeeEEe--
Q 011826 269 SPIAGLFPTYL--NGVIHWVCDDIE--------DDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMNLGV-- 336 (476)
Q Consensus 269 ~~~~~~~~v~~--~G~lywl~~~~~--------~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~~~L~~-- 336 (476)
........+.+ +|.+|....... ........|..+|.. .++..+.-. .. . ...+..
T Consensus 114 ~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~--~~-~--------~~~i~~~~ 181 (314)
T 1pjx_A 114 RRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTA--FQ-F--------PNGIAVRH 181 (314)
T ss_dssp CBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEE--ES-S--------EEEEEEEE
T ss_pred ccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccC--CC-C--------cceEEEec
Confidence 11111134444 577765443200 000011379999987 555443110 00 0 111222
Q ss_pred ---eCC-eEEEEecCCCCCeEEEeeccCCCCcceEEEEEE-eCCCc--ceeeEEEEecCCcEEEEe-cCCEEEEEeCCCC
Q 011826 337 ---LGG-CLSICDVTYFAPPDIWVMKDYGVQESWIKQLSV-DNGYF--GICRPIKYLDDGSLLLFC-KRRALVLYNPVEK 408 (476)
Q Consensus 337 ---~~G-~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I-~~~~~--~~~~p~~~~~~g~il~~~-~~~~l~~ydl~t~ 408 (476)
-+| .|+++.. ....+.+|-++..+ .......+ ..... ....-+.+..+|.+++.. ..+.+..||++++
T Consensus 182 ~~d~dg~~l~v~~~-~~~~i~~~~~~~~g---~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g 257 (314)
T 1pjx_A 182 MNDGRPYQLIVAET-PTKKLWSYDIKGPA---KIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGG 257 (314)
T ss_dssp CTTSCEEEEEEEET-TTTEEEEEEEEETT---EEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCB
T ss_pred ccCCCCCEEEEEEC-CCCeEEEEECCCCC---ccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCC
Confidence 234 4666654 34556666655322 23222111 11111 122234455678888765 4678999999954
Q ss_pred c-EEEEE
Q 011826 409 N-TRYLL 414 (476)
Q Consensus 409 ~-~~~v~ 414 (476)
+ +..+.
T Consensus 258 ~~~~~~~ 264 (314)
T 1pjx_A 258 QPKMRIR 264 (314)
T ss_dssp SCSEEEE
T ss_pred cEeEEEe
Confidence 4 44443
No 106
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=42.76 E-value=3.4e+02 Score=28.95 Aligned_cols=155 Identities=10% Similarity=0.062 Sum_probs=80.2
Q ss_pred EEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCCCceEEccCCCCCCccCccceEE---cceEEEEEeeccCCCCCcce
Q 011826 223 ISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGGAAWRKVGNAPWSPIAGLFPTYL---NGVIHWVCDDIEDDQSCSDC 299 (476)
Q Consensus 223 ~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t~~Wr~~~~~p~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~~ 299 (476)
..|+.+|...+ +|+..... ..+++++++.+..-+.+.... +....++.+ +|.|||.... ....
T Consensus 473 P~GLAvD~~~~--~LY~tD~~---~~~I~v~~ldG~~~~~l~~~~---l~~P~gIaVDp~~g~LYwtD~g------~~~~ 538 (791)
T 3m0c_C 473 PDGLAVDWIHS--NIYWTDSV---LGTVSVADTKGVKRKTLFREN---GSKPRAIVVDPVHGFMYWTDWG------TPAK 538 (791)
T ss_dssp CCEEEEETTTT--EEEEEETT---TTEEEEEETTSSSEEEEEECT---TCCEEEEEEETTTTEEEEEECS------SSCE
T ss_pred cceeeeeecCC--cEEEEecC---CCeEEEEeCCCCeEEEEEeCC---CCCcceEEEecCCCCEEEecCC------CCCe
Confidence 45677776543 23333222 357788887765544443211 111145555 5899998643 1238
Q ss_pred EEEEECCCceEEEEcCCCCCCCCCCccCCcceeeEE--eeCCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCCc
Q 011826 300 IVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMNLG--VLGGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYF 377 (476)
Q Consensus 300 Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~~~L~--~~~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~ 377 (476)
|..+|+....-..+-. .... +...|+ ..+|.||+++. ..-.||+.+-.| ....+. +.. ..
T Consensus 539 I~~~~~dG~~~~~lv~-~~l~---------~P~GLavD~~~~~LYwaD~---~~~~I~~~d~dG-~~~~~v---~~~-~~ 600 (791)
T 3m0c_C 539 IKKGGLNGVDIYSLVT-ENIQ---------WPNGITLDLLSGRLYWVDS---KLHSISSIDVNG-GNRKTI---LED-EK 600 (791)
T ss_dssp EEEEETTSCCEEEEEC-SSCS---------CEEEEEEETTTTEEEEEET---TTTEEEEEETTS-CSCEEE---EEC-TT
T ss_pred EEEEecCCCceEEEEe-CCCC---------CceEEEEecCCCeEEEEeC---CCCcEEEEecCC-CceEEE---ecC-CC
Confidence 9999997755544421 1111 122233 34789999975 234677776544 222222 221 11
Q ss_pred ceeeEEEEec-CCcEEEEe-cCCEEEEEeCCCCc
Q 011826 378 GICRPIKYLD-DGSLLLFC-KRRALVLYNPVEKN 409 (476)
Q Consensus 378 ~~~~p~~~~~-~g~il~~~-~~~~l~~ydl~t~~ 409 (476)
.+..|+++.. ++.|++.. ....|..+|..+++
T Consensus 601 ~l~~P~glav~~~~lYwtD~~~~~I~~~dk~tG~ 634 (791)
T 3m0c_C 601 RLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGS 634 (791)
T ss_dssp TTSSEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred ccCCCCEEEEeCCEEEEEECCCCEEEEEeCCCCc
Confidence 2234555433 33455444 34688889876654
No 107
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=42.16 E-value=2.3e+02 Score=26.94 Aligned_cols=30 Identities=17% Similarity=0.195 Sum_probs=19.6
Q ss_pred EEEecCCcEEEEecCCEEEEEeCCCCcEEE
Q 011826 383 IKYLDDGSLLLFCKRRALVLYNPVEKNTRY 412 (476)
Q Consensus 383 ~~~~~~g~il~~~~~~~l~~ydl~t~~~~~ 412 (476)
..+..+|.+|....++.+..+|+++++.++
T Consensus 406 ~~fspdg~~lasg~d~~i~iW~~~~gk~rK 435 (435)
T 4e54_B 406 NEFNPMGDTLASAMGYHILIWSQQEARTRK 435 (435)
T ss_dssp EEECTTSSCEEEECSSEEEECCCC------
T ss_pred EEECCCCCEEEEEcCCcEEEEECCcCeeeC
Confidence 346778888887778899999999887653
No 108
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=41.70 E-value=2.1e+02 Score=26.17 Aligned_cols=201 Identities=12% Similarity=0.009 Sum_probs=94.5
Q ss_pred EEEecccceEEEeecCCCccEEEEcccccce-eecCCCCCCCCcCccceeEEEEeEeCC-CCCeEEEEEEEcCccccEEE
Q 011826 174 DIVNSCNGFLCLRKPFHRNPCIICNPITGEY-VTIPKPAAEDDKKTLRTVISGFGYSFR-SKQYKVLRLVFDDFLNRTAE 251 (476)
Q Consensus 174 ~~~~s~~GLlcl~~~~~~~~~~V~NP~T~~~-~~LP~~~~~~~~~~~~~~~~~~g~d~~-~~~yKVv~~~~~~~~~~~~e 251 (476)
-+.++.+|-+.+... ...+.++|..+++. ..+.... ......+.++|. .+.+ + .....+ -.+.
T Consensus 88 ~~s~s~D~~i~~w~~--~~~~~~~~~~~~~~~~~~~~~~--------~~~v~~~~~~~~~~~~~-l-~s~s~d---g~i~ 152 (343)
T 3lrv_A 88 IISRGPCNRLLLLYP--GNQITILDSKTNKVLREIEVDS--------ANEIIYMYGHNEVNTEY-F-IWADNR---GTIG 152 (343)
T ss_dssp EEEECSTTEEEEEET--TTEEEEEETTTCCEEEEEECCC--------SSCEEEEECCC---CCE-E-EEEETT---CCEE
T ss_pred eEEecCCCeEEEEEc--cCceEEeecCCcceeEEeecCC--------CCCEEEEEcCCCCCCCE-E-EEEeCC---CcEE
Confidence 455667887777664 34677888888873 2222111 113455666662 2333 2 222222 4688
Q ss_pred EEEeCCCceEEccCCCCCCccCccceEE--cceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCc
Q 011826 252 IYSLGGAAWRKVGNAPWSPIAGLFPTYL--NGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNL 329 (476)
Q Consensus 252 Vyss~t~~Wr~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~ 329 (476)
+|+..++.-........... ...+.+ +|.+...+.. ...|..+|+.+.+-....+......
T Consensus 153 ~wd~~~~~~~~~~~~~~~~~--i~~~~~~pdg~~lasg~~-------dg~i~iwd~~~~~~~~~~~~~~h~~-------- 215 (343)
T 3lrv_A 153 FQSYEDDSQYIVHSAKSDVE--YSSGVLHKDSLLLALYSP-------DGILDVYNLSSPDQASSRFPVDEEA-------- 215 (343)
T ss_dssp EEESSSSCEEEEECCCSSCC--CCEEEECTTSCEEEEECT-------TSCEEEEESSCTTSCCEECCCCTTS--------
T ss_pred EEECCCCcEEEEEecCCCCc--eEEEEECCCCCEEEEEcC-------CCEEEEEECCCCCCCccEEeccCCC--------
Confidence 99988876533221111100 122222 3544333322 2379999998876431122210000
Q ss_pred ceeeEEee-CCeEEEEecCCCCCeEEEeeccCCCCcceEEE--EEEeCCCcceeeEEEEecCCcEEEEe-c-CCEEEEEe
Q 011826 330 YDMNLGVL-GGCLSICDVTYFAPPDIWVMKDYGVQESWIKQ--LSVDNGYFGICRPIKYLDDGSLLLFC-K-RRALVLYN 404 (476)
Q Consensus 330 ~~~~L~~~-~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~--~~I~~~~~~~~~p~~~~~~g~il~~~-~-~~~l~~yd 404 (476)
....+.-. +|.+.++.. .+ .+.||-+............ +..... . .-+.+..+|..++.. . ++.+..|+
T Consensus 216 ~v~~l~fs~~g~~l~s~~-~~-~v~iwd~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~g~~l~~~s~~d~~i~v~~ 289 (343)
T 3lrv_A 216 KIKEVKFADNGYWMVVEC-DQ-TVVCFDLRKDVGTLAYPTYTIPEFKTG--T--VTYDIDDSGKNMIAYSNESNSLTIYK 289 (343)
T ss_dssp CEEEEEECTTSSEEEEEE-SS-BEEEEETTSSTTCBSSCCCBC-----C--C--EEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CEEEEEEeCCCCEEEEEe-CC-eEEEEEcCCCCcceeeccccccccccc--c--eEEEECCCCCEEEEecCCCCcEEEEE
Confidence 02222222 354444433 23 8999988754311111100 001110 0 235667788777762 3 66777777
Q ss_pred CC--CCcEEE
Q 011826 405 PV--EKNTRY 412 (476)
Q Consensus 405 l~--t~~~~~ 412 (476)
.+ ++.+..
T Consensus 290 ~~~~~~~~~~ 299 (343)
T 3lrv_A 290 FDKKTKNWTK 299 (343)
T ss_dssp ECTTTCSEEE
T ss_pred EcccccceEe
Confidence 64 444544
No 109
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=41.34 E-value=2.5e+02 Score=26.94 Aligned_cols=204 Identities=9% Similarity=0.042 Sum_probs=102.6
Q ss_pred EEEecccceEEEeecCCCccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEE
Q 011826 174 DIVNSCNGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIY 253 (476)
Q Consensus 174 ~~~~s~~GLlcl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVy 253 (476)
.+.-..+|-|.+.+. ....+.+++|.+++...+..... . .. +.+++..+ .++...... ...+.++
T Consensus 135 ~la~d~~g~lyv~d~-~~~~I~~id~~~g~~~~~~~~~~-------~--~~-ia~~~~g~--~l~~~d~~~--~~~I~~~ 199 (409)
T 3hrp_A 135 GIAAVGNNTVLAYQR-DDPRVRLISVDDNKVTTVHPGFK-------G--GK-PAVTKDKQ--RVYSIGWEG--THTVYVY 199 (409)
T ss_dssp EEEECSTTEEEEEET-TTTEEEEEETTTTEEEEEEETCC-------B--CB-CEECTTSS--EEEEEBSST--TCEEEEE
T ss_pred EEEEeCCCCEEEEec-CCCcEEEEECCCCEEEEeeccCC-------C--Cc-eeEecCCC--cEEEEecCC--CceEEEE
Confidence 344456777666664 34579999999988776654321 1 11 45555433 222221111 1256666
Q ss_pred EeCCCc-eEEccCCCCCCccCccceEE---cceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCc
Q 011826 254 SLGGAA-WRKVGNAPWSPIAGLFPTYL---NGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNL 329 (476)
Q Consensus 254 ss~t~~-Wr~~~~~p~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~ 329 (476)
+..++. .+.+............++.+ +|.+|+ +.. ...|..+|+.+.....+.-....... +
T Consensus 200 d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv-~d~-------~~~I~~~d~~~~~~~~~~~~~~~g~~------~ 265 (409)
T 3hrp_A 200 MKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYF-VDS-------NKNFGRFNVKTQEVTLIKQLELSGSL------G 265 (409)
T ss_dssp EGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEE-ECT-------TCEEEEEETTTCCEEEEEECCCCSCC------C
T ss_pred EcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEE-EEC-------CCcEEEEECCCCCEEEEecccccCCC------C
Confidence 665442 23332111101111133333 688988 422 23899999988776555211110000 0
Q ss_pred ce-e-eEEee--CCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCC---C--------cceeeE--EEEecCCcEE
Q 011826 330 YD-M-NLGVL--GGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNG---Y--------FGICRP--IKYLDDGSLL 392 (476)
Q Consensus 330 ~~-~-~L~~~--~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~---~--------~~~~~p--~~~~~~g~il 392 (476)
.. . .++.. +|.|++++. ... .|++++..+ .-. ..+... . ..+..| +.+..+|.++
T Consensus 266 ~~P~~~ia~~p~~g~lyv~d~-~~~--~I~~~~~~g---~~~--~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~ly 337 (409)
T 3hrp_A 266 TNPGPYLIYYFVDSNFYMSDQ-NLS--SVYKITPDG---ECE--WFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFY 337 (409)
T ss_dssp CSSCCEEEEETTTTEEEEEET-TTT--EEEEECTTC---CEE--EEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEE
T ss_pred CCccccEEEeCCCCEEEEEeC-CCC--EEEEEecCC---CEE--EEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEE
Confidence 11 1 33333 588988875 233 455554333 111 112211 0 012235 4455678887
Q ss_pred EEec--CCEEEEEeCCCCcEEEEE
Q 011826 393 LFCK--RRALVLYNPVEKNTRYLL 414 (476)
Q Consensus 393 ~~~~--~~~l~~ydl~t~~~~~v~ 414 (476)
+... ..++..+|+.++.+..+-
T Consensus 338 vad~~~~~~I~~~~~~~G~v~~~~ 361 (409)
T 3hrp_A 338 IVDGFKGYCLRKLDILDGYVSTVA 361 (409)
T ss_dssp EEETTTTCEEEEEETTTTEEEEEE
T ss_pred EEeCCCCCEEEEEECCCCEEEEEe
Confidence 7754 468999997777766554
No 110
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=40.75 E-value=3e+02 Score=27.82 Aligned_cols=195 Identities=8% Similarity=-0.023 Sum_probs=97.2
Q ss_pred ccEEEEcccc------cceeecC-CCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcC----ccccEEEEEEeC-CC-
Q 011826 192 NPCIICNPIT------GEYVTIP-KPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDD----FLNRTAEIYSLG-GA- 258 (476)
Q Consensus 192 ~~~~V~NP~T------~~~~~LP-~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~----~~~~~~eVyss~-t~- 258 (476)
..++++|..+ ++...|. .... ......+.|. +++ |+....+. +....+.+++.. ++
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~~~---------~~~~~~~SpD-G~~-la~~~~~~~~~~~~~~~i~~~d~~~~g~ 229 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDAHR---------FVTGPRLSPD-GRQ-AVWLAWDHPRMPWEGTELKTARVTEDGR 229 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSCSS---------EECCCEECTT-SSE-EEEEEECTTCCTTTCEEEEEEEECTTSC
T ss_pred eEEEEEECCCCccccCCceeEEEecCCC---------cccCceECCC-CCE-EEEEECCCCCCCCCCcEEEEEEECCCCc
Confidence 4799999999 7777766 3211 1223344443 233 22222221 123578888988 57
Q ss_pred --ceEEccCCCCCCccCccceEE-cceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCcceeeEE
Q 011826 259 --AWRKVGNAPWSPIAGLFPTYL-NGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMNLG 335 (476)
Q Consensus 259 --~Wr~~~~~p~~~~~~~~~v~~-~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~~~L~ 335 (476)
..+.+....... .....+. +|.+|+.+.. + ....|..+|+.+.++..+--.......+.+.-+ ...+.
T Consensus 230 ~~~~~~l~~~~~~~--~~~~~~spdg~l~~~~~~---~--~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~--~~~~~ 300 (662)
T 3azo_A 230 FADTRTLLGGPEEA--IAQAEWAPDGSLIVATDR---T--GWWNLHRVDPATGAATQLCRREEEFAGPLWTPG--MRWFA 300 (662)
T ss_dssp EEEEEEEEEETTBC--EEEEEECTTSCEEEEECT---T--SSCEEEEECTTTCCEEESSCCSSBSSCCCCSTT--CCSEE
T ss_pred ccccEEeCCCCCce--EcceEECCCCeEEEEECC---C--CCeEEEEEECCCCceeecccccccccCcccccc--CceEe
Confidence 444433211000 0122222 7887776643 2 123799999988777655221111111111000 11233
Q ss_pred ee-CCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEEec-C---CEEEEEeCCCCcE
Q 011826 336 VL-GGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLFCK-R---RALVLYNPVEKNT 410 (476)
Q Consensus 336 ~~-~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~~~-~---~~l~~ydl~t~~~ 410 (476)
.. +|.+.+... . ....||+++-.+ ... ..+... ......+...+++.+++... . ..++.+|+++++.
T Consensus 301 ~~~~~~~~~~~~-~-~~~~l~~~d~~~--~~~---~~l~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~ 372 (662)
T 3azo_A 301 PLANGLIAVVHG-K-GAAVLGILDPES--GEL---VDAAGP-WTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRA 372 (662)
T ss_dssp ECTTSCEEEEEB-S-SSCEEEEEETTT--TEE---EECCSS-CCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred EeCCCEEEEEEE-c-CccEEEEEECCC--CcE---EEecCC-CCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCce
Confidence 33 577766665 4 789999987543 222 233322 12222231123345555432 2 3688899988887
Q ss_pred EEEE
Q 011826 411 RYLL 414 (476)
Q Consensus 411 ~~v~ 414 (476)
+.+.
T Consensus 373 ~~l~ 376 (662)
T 3azo_A 373 RTIG 376 (662)
T ss_dssp EEEE
T ss_pred EEee
Confidence 7664
No 111
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=39.69 E-value=2.1e+02 Score=25.73 Aligned_cols=188 Identities=9% Similarity=-0.001 Sum_probs=89.0
Q ss_pred CccEEEEcccccc--eeecCCCCCCCCcCccceeEEEEeEeC-CCCCeEEEEEEEcCccccEEEEEEeCCCceEEccCCC
Q 011826 191 RNPCIICNPITGE--YVTIPKPAAEDDKKTLRTVISGFGYSF-RSKQYKVLRLVFDDFLNRTAEIYSLGGAAWRKVGNAP 267 (476)
Q Consensus 191 ~~~~~V~NP~T~~--~~~LP~~~~~~~~~~~~~~~~~~g~d~-~~~~yKVv~~~~~~~~~~~~eVyss~t~~Wr~~~~~p 267 (476)
+..+.|||..+++ ...+..... ........+.+.+ -+.+-+.+.....+ -.+.+|+..++.=.......
T Consensus 138 d~~i~vwd~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~~~l~~~~~d---~~i~i~d~~~~~~~~~~~~~ 209 (357)
T 3i2n_A 138 DGTVKVWDPRQKDDPVANMEPVQG-----ENKRDCWTVAFGNAYNQEERVVCAGYDN---GDIKLFDLRNMALRWETNIK 209 (357)
T ss_dssp TSCEEEECTTSCSSCSEEECCCTT-----SCCCCEEEEEEECCCC-CCCEEEEEETT---SEEEEEETTTTEEEEEEECS
T ss_pred CCeEEEEeCCCCCCcceeccccCC-----CCCCceEEEEEEeccCCCCCEEEEEccC---CeEEEEECccCceeeecCCC
Confidence 4679999998876 333333221 0011223333322 11122333333332 47889998887532221111
Q ss_pred CCCccCccceEE-----cceEEEEEeeccCCCCCcceEEEEECCCceE----EEEcCCCCCCCCCCccCCcceeeEEee-
Q 011826 268 WSPIAGLFPTYL-----NGVIHWVCDDIEDDQSCSDCIVGFDFEDERF----CVIPAPPHFAEKPKTRDNLYDMNLGVL- 337 (476)
Q Consensus 268 ~~~~~~~~~v~~-----~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f----~~i~lP~~~~~~~~~~~~~~~~~L~~~- 337 (476)
.. ...+.+ +|.....+.. ...|..+|+.+.+. ....+..... ....+.-.
T Consensus 210 -~~---v~~~~~~~~~~~~~~l~~~~~-------dg~i~i~d~~~~~~~~~~~~~~~~~~~~---------~v~~~~~~~ 269 (357)
T 3i2n_A 210 -NG---VCSLEFDRKDISMNKLVATSL-------EGKFHVFDMRTQHPTKGFASVSEKAHKS---------TVWQVRHLP 269 (357)
T ss_dssp -SC---EEEEEESCSSSSCCEEEEEES-------TTEEEEEEEEEEETTTEEEEEEEECCSS---------CEEEEEEET
T ss_pred -Cc---eEEEEcCCCCCCCCEEEEECC-------CCeEEEEeCcCCCcccceeeeccCCCcC---------CEEEEEECC
Confidence 00 022222 4444444432 23788888765432 1111111110 02222222
Q ss_pred CCe-EEEEecCCCCCeEEEeeccCCC-------------CcceEEEEEEeCCCcceeeEEEEecCCcEEE--EecCCEEE
Q 011826 338 GGC-LSICDVTYFAPPDIWVMKDYGV-------------QESWIKQLSVDNGYFGICRPIKYLDDGSLLL--FCKRRALV 401 (476)
Q Consensus 338 ~G~-L~~~~~~~~~~l~IWvl~~~~~-------------~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~--~~~~~~l~ 401 (476)
+|. +.++.. .+..+.||-+..... ...+.....+... .....-+.+..+|..++ ...++.+.
T Consensus 270 ~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~s~~~d~~i~ 347 (357)
T 3i2n_A 270 QNRELFLTAG-GAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLS-TQPISSLDWSPDKRGLCVCSSFDQTVR 347 (357)
T ss_dssp TEEEEEEEEE-TTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECC-SSCEEEEEECSSSTTEEEEEETTSEEE
T ss_pred CCCcEEEEEe-CCCcEEEeecCCCcccccccCCCCccccccccceeeccccC-CCCeeEEEEcCCCCeEEEEecCCCcEE
Confidence 344 333333 567899999874321 1245555555432 22223456677786665 34578899
Q ss_pred EEeCCCC
Q 011826 402 LYNPVEK 408 (476)
Q Consensus 402 ~ydl~t~ 408 (476)
.||+.+.
T Consensus 348 iw~~~~~ 354 (357)
T 3i2n_A 348 VLIVTKL 354 (357)
T ss_dssp EEEECC-
T ss_pred EEECCCc
Confidence 9998764
No 112
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=39.02 E-value=53 Score=25.80 Aligned_cols=44 Identities=5% Similarity=0.070 Sum_probs=30.7
Q ss_pred cEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEc
Q 011826 193 PCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFD 243 (476)
Q Consensus 193 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~ 243 (476)
.+++++|.|++|. |.... ......+.+..|...+.|.|+.....
T Consensus 12 ~V~~~d~~~~~W~--p~~~g-----~~gvs~V~~~~d~~~~~yrI~~~~l~ 55 (115)
T 1egx_A 12 TVMLYDDGNKRWL--PAGTG-----PQAFSRVQIYHNPTANSFRVVGRKMQ 55 (115)
T ss_dssp ECBEECTTTSSCC--BSSCS-----CCCCEEEEEEEETTTTEEEEEEEESS
T ss_pred EEEEEcCCCCcee--ECCCC-----CCCccEEEEEEeCCCCEEEEEEEEcC
Confidence 4788999999974 54321 01223578888998999999887643
No 113
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=38.94 E-value=2.1e+02 Score=25.57 Aligned_cols=186 Identities=8% Similarity=0.006 Sum_probs=87.8
Q ss_pred cEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCCCc-eEEcc--CCCCC
Q 011826 193 PCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGGAA-WRKVG--NAPWS 269 (476)
Q Consensus 193 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t~~-Wr~~~--~~p~~ 269 (476)
.+.||++.+++....-+... ...++.++|.. .+ ++.....+ ...+.+|+...+. -.... ..+..
T Consensus 109 ~i~v~d~~~~~~~~~~~~~~---------~~~~~~~spdg-~~-l~~~~~~~--~~~i~~~~~~~~g~~~~~~~~~~~~~ 175 (331)
T 3u4y_A 109 NMQSYSFLKNKFISTIPIPY---------DAVGIAISPNG-NG-LILIDRSS--ANTVRRFKIDADGVLFDTGQEFISGG 175 (331)
T ss_dssp EEEEEETTTTEEEEEEECCT---------TEEEEEECTTS-SC-EEEEEETT--TTEEEEEEECTTCCEEEEEEEEECSS
T ss_pred cEEEEECCCCCeEEEEECCC---------CccceEECCCC-CE-EEEEecCC--CceEEEEEECCCCcEeecCCccccCC
Confidence 79999999988654322111 12567777754 33 33333322 1227777766431 11110 00000
Q ss_pred CccCccceEEcceEEEEEeeccCCCCCcceEEEEECCCceE----EEEcCCCCCCCCCCccCCcceeeEEeeCCe-EEEE
Q 011826 270 PIAGLFPTYLNGVIHWVCDDIEDDQSCSDCIVGFDFEDERF----CVIPAPPHFAEKPKTRDNLYDMNLGVLGGC-LSIC 344 (476)
Q Consensus 270 ~~~~~~~v~~~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f----~~i~lP~~~~~~~~~~~~~~~~~L~~~~G~-L~~~ 344 (476)
.....-.+.-+|...|++.. ....|..+|+.+.+. ..++.+.... .+.+ .-+|+ |++.
T Consensus 176 ~~~~~~~~spdg~~l~v~~~------~~~~v~v~d~~~~~~~~~~~~~~~~~~~~----------~~~~-spdg~~l~v~ 238 (331)
T 3u4y_A 176 TRPFNITFTPDGNFAFVANL------IGNSIGILETQNPENITLLNAVGTNNLPG----------TIVV-SRDGSTVYVL 238 (331)
T ss_dssp SSEEEEEECTTSSEEEEEET------TTTEEEEEECSSTTSCEEEEEEECSSCCC----------CEEE-CTTSSEEEEE
T ss_pred CCccceEECCCCCEEEEEeC------CCCeEEEEECCCCcccceeeeccCCCCCc----------eEEE-CCCCCEEEEE
Confidence 00000112225664444432 133799999987664 3344321111 1111 22455 5555
Q ss_pred ecCCCCCeEEEeeccCCCCcceEEEEEEeCC----Ccce--eeEEEEecCCcEEE-Eec-CCEEEEEeCCCCcEEEE
Q 011826 345 DVTYFAPPDIWVMKDYGVQESWIKQLSVDNG----YFGI--CRPIKYLDDGSLLL-FCK-RRALVLYNPVEKNTRYL 413 (476)
Q Consensus 345 ~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~----~~~~--~~p~~~~~~g~il~-~~~-~~~l~~ydl~t~~~~~v 413 (476)
.. ....+.+|-++. ........+... .... ...+.+..+|+.++ ... ++.+..||+.++.+..+
T Consensus 239 ~~-~~~~i~~~d~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~ 310 (331)
T 3u4y_A 239 TE-STVDVFNFNQLS----GTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVVGYV 310 (331)
T ss_dssp CS-SEEEEEEEETTT----TEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEEEEC
T ss_pred Ec-CCCEEEEEECCC----CceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCcccce
Confidence 43 334466665543 223223333321 1100 12356777886554 333 46899999998876655
No 114
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=37.78 E-value=3.8e+02 Score=28.11 Aligned_cols=201 Identities=8% Similarity=-0.016 Sum_probs=100.4
Q ss_pred cccceEEEeecCCCccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCC
Q 011826 178 SCNGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGG 257 (476)
Q Consensus 178 s~~GLlcl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t 257 (476)
..+|-|-+... ...+..+||.++++..+...+.. .........++..|... . +.+...+ -.+..|+..+
T Consensus 318 D~~g~lWigt~--~~Gl~~~~~~~~~~~~~~~~~~~--~~l~~~~V~~i~~d~~g-~---lWiGt~~---~Gl~~~~~~~ 386 (795)
T 4a2l_A 318 DSQGGMWLGTY--FGGLNYYHPIRNRFKNIRNIPYK--NSLSDNVVSCIVEDKDK-N---LWIGTND---GGLNLYNPIT 386 (795)
T ss_dssp CTTSCEEEEES--SSCEEEECGGGGSSEEECCCTTS--SSCSCSSEEEEEECTTS-C---EEEEESS---SCEEEECTTT
T ss_pred eCCcCEEEEEC--CCCeEEeCCCcccceEEcCCCCC--CCCCCCeeEEEEECCCC-C---EEEEECC---CCeEEEcCCC
Confidence 34555544432 24588889988887666543210 00111234555555532 1 2333322 2477788888
Q ss_pred CceEEccCCC-----CCCccCccceEE--cceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCcc
Q 011826 258 AAWRKVGNAP-----WSPIAGLFPTYL--NGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLY 330 (476)
Q Consensus 258 ~~Wr~~~~~p-----~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~ 330 (476)
+.++.....+ ........+++. +|.+.|+... ...|..||..++++..+......... ..
T Consensus 387 ~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~-------~~Gl~~~d~~~~~~~~~~~~~~~l~~-----~~- 453 (795)
T 4a2l_A 387 QRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTH-------AGGLSILHRNSGQVENFNQRNSQLVN-----EN- 453 (795)
T ss_dssp CCEEEECCC------CCSCSCEEEEEEETTTTEEEEEET-------TTEEEEEETTTCCEEEECTTTSCCSC-----SC-
T ss_pred CcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeC-------cCceeEEeCCCCcEEEeecCCCCcCC-----Ce-
Confidence 8887765332 111111134444 5665787753 23899999999999887642111100 01
Q ss_pred eeeEEe-eCCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEe-CCCc--ceeeEEEEecCCcEEEEecCCEEEEEeCC
Q 011826 331 DMNLGV-LGGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVD-NGYF--GICRPIKYLDDGSLLLFCKRRALVLYNPV 406 (476)
Q Consensus 331 ~~~L~~-~~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~-~~~~--~~~~p~~~~~~g~il~~~~~~~l~~ydl~ 406 (476)
...+.. .+|.|.+... ..+. .++.. ...|+...... .... ....-+....+|.+.+... ..|+.||++
T Consensus 454 v~~i~~d~~g~lwigt~---~Gl~--~~~~~--~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~ 525 (795)
T 4a2l_A 454 VYAILPDGEGNLWLGTL---SALV--RFNPE--QRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EGLSVFKQE 525 (795)
T ss_dssp EEEEEECSSSCEEEEES---SCEE--EEETT--TTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SCEEEEEEE
T ss_pred eEEEEECCCCCEEEEec---Ccee--EEeCC--CCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-CceEEEeCC
Confidence 222322 2467766653 2233 33321 13444321110 0000 1112233345677887766 679999988
Q ss_pred CCcE
Q 011826 407 EKNT 410 (476)
Q Consensus 407 t~~~ 410 (476)
++++
T Consensus 526 ~~~~ 529 (795)
T 4a2l_A 526 GLDI 529 (795)
T ss_dssp TTEE
T ss_pred CCeE
Confidence 7766
No 115
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=37.34 E-value=2.3e+02 Score=25.44 Aligned_cols=106 Identities=11% Similarity=0.093 Sum_probs=55.1
Q ss_pred ccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcC--ccccEEEEEEeCCCceEEccCCCCC
Q 011826 192 NPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDD--FLNRTAEIYSLGGAAWRKVGNAPWS 269 (476)
Q Consensus 192 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~--~~~~~~eVyss~t~~Wr~~~~~p~~ 269 (476)
..++.+||.+++...+. .. ....++.+++..+ .+++..... .....+.+|+..++...........
T Consensus 169 ~~v~~~d~~~g~~~~~~--~~--------~~p~gl~~spdg~--~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~ 236 (305)
T 3dr2_A 169 HSVYRLPPDGSPLQRMA--DL--------DHPNGLAFSPDEQ--TLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASV 236 (305)
T ss_dssp EEEEEECSSSCCCEEEE--EE--------SSEEEEEECTTSS--EEEEEECCC---CCCEEEEEEEETTEEEEEEEEECC
T ss_pred CeEEEEcCCCCcEEEEe--cC--------CCCcceEEcCCCC--EEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEEC
Confidence 45888899888776654 21 1224566666432 232222210 0024677787765532111100000
Q ss_pred CccCccceEE--cceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCC
Q 011826 270 PIAGLFPTYL--NGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPH 318 (476)
Q Consensus 270 ~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~ 318 (476)
......++.+ +|. .|++.. ..|..||...+....+.+|..
T Consensus 237 ~~~~pdgi~~d~~G~-lwv~~~--------~gv~~~~~~g~~~~~~~~~~~ 278 (305)
T 3dr2_A 237 PDGLPDGFCVDRGGW-LWSSSG--------TGVCVFDSDGQLLGHIPTPGT 278 (305)
T ss_dssp SSSCCCSEEECTTSC-EEECCS--------SEEEEECTTSCEEEEEECSSC
T ss_pred CCCCCCeEEECCCCC-EEEecC--------CcEEEECCCCCEEEEEECCCc
Confidence 0001134444 477 555532 279999999988888988863
No 116
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=37.20 E-value=2.8e+02 Score=26.35 Aligned_cols=137 Identities=10% Similarity=0.073 Sum_probs=65.6
Q ss_pred cEEEEEEeCCCceEEccCCCCCCccCccceEEcceEEEEEeeccCCCCCcceEEEEECCCceE-EEEcCCCCCCCCCCcc
Q 011826 248 RTAEIYSLGGAAWRKVGNAPWSPIAGLFPTYLNGVIHWVCDDIEDDQSCSDCIVGFDFEDERF-CVIPAPPHFAEKPKTR 326 (476)
Q Consensus 248 ~~~eVyss~t~~Wr~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f-~~i~lP~~~~~~~~~~ 326 (476)
..+.+|+..++.-...-..... ....+..+|.+...+.. ...|..+|+.+.+. ..+..+.....
T Consensus 299 ~~i~i~d~~~~~~~~~~~~~~~---~v~~~~~~~~~l~~~~~-------dg~i~vwd~~~~~~~~~~~~~~~~~~----- 363 (445)
T 2ovr_B 299 TSIRVWDVETGNCIHTLTGHQS---LTSGMELKDNILVSGNA-------DSTVKIWDIKTGQCLQTLQGPNKHQS----- 363 (445)
T ss_dssp SCEEEEETTTCCEEEEECCCCS---CEEEEEEETTEEEEEET-------TSCEEEEETTTCCEEEEECSTTSCSS-----
T ss_pred CeEEEEECCCCCEEEEEcCCcc---cEEEEEEeCCEEEEEeC-------CCeEEEEECCCCcEEEEEccCCCCCC-----
Confidence 3578888877642211111100 11344455654443322 23799999977554 34444432211
Q ss_pred CCcceeeEEeeCCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeC--CCcceeeEEEEecCCcEEEEe-cCC----E
Q 011826 327 DNLYDMNLGVLGGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDN--GYFGICRPIKYLDDGSLLLFC-KRR----A 399 (476)
Q Consensus 327 ~~~~~~~L~~~~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~--~~~~~~~p~~~~~~g~il~~~-~~~----~ 399 (476)
.+.-...++.+.++.. .+..+.||-++... ......... .......-+.+..+|.++... .++ .
T Consensus 364 ----~v~~~~~~~~~l~s~~-~dg~v~iwd~~~~~----~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~ 434 (445)
T 2ovr_B 364 ----AVTCLQFNKNFVITSS-DDGTVKLWDLKTGE----FIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETK 434 (445)
T ss_dssp ----CEEEEEECSSEEEEEE-TTSEEEEEETTTCC----EEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCE
T ss_pred ----CEEEEEECCCEEEEEe-CCCeEEEEECCCCc----eeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccE
Confidence 2222233455544443 56789999886432 222211111 111222334555666655553 233 4
Q ss_pred EEEEeCCCC
Q 011826 400 LVLYNPVEK 408 (476)
Q Consensus 400 l~~ydl~t~ 408 (476)
+..+|.+..
T Consensus 435 l~v~df~~~ 443 (445)
T 2ovr_B 435 LLVLDFDVD 443 (445)
T ss_dssp EEEEECCCC
T ss_pred EEEEECCCC
Confidence 888887653
No 117
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=36.81 E-value=2.6e+02 Score=26.00 Aligned_cols=188 Identities=11% Similarity=0.042 Sum_probs=95.4
Q ss_pred cceEEEeecCCCccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCCCc
Q 011826 180 NGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGGAA 259 (476)
Q Consensus 180 ~GLlcl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t~~ 259 (476)
.+.|++... ..+...++.+.+...+-... ....++.+|+..+ +|+..... ..++..++..++.
T Consensus 44 ~~~ll~~~~---~~I~~i~~~g~~~~~~~~~~---------~~~~~l~~d~~~~--~ly~~D~~---~~~I~r~~~~g~~ 106 (349)
T 3v64_C 44 EPVLLFANR---IDIRQVLPHRSEYTLLLNNL---------ENAIALDFHHRRE--LVFWSDVT---LDRILRANLNGSN 106 (349)
T ss_dssp CCEEEEECB---SCEEEECTTSCCEEEEECSC---------SCEEEEEEETTTT--EEEEEETT---TTEEEEEETTSCS
T ss_pred CceeEeecc---cceEEEeCCCCeeEEeecCC---------CceEEEEEecccc--EEEEEecc---CCceEEEecCCCC
Confidence 455555543 34777777766654433211 1357888887544 33333222 2456677776655
Q ss_pred eEEccCCCCCCccCccceEE---cceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCcceeeEEe
Q 011826 260 WRKVGNAPWSPIAGLFPTYL---NGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMNLGV 336 (476)
Q Consensus 260 Wr~~~~~p~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~~~L~~ 336 (476)
-+.+.... .....++.+ +|.+||.... ...|..+|+....-..+. ..... . ...++.
T Consensus 107 ~~~~~~~~---~~~p~glavd~~~g~ly~~d~~-------~~~I~~~~~dG~~~~~l~-~~~l~-~--------P~~iav 166 (349)
T 3v64_C 107 VEEVVSTG---LESPGGLAVDWVHDKLYWTDSG-------TSRIEVANLDGAHRKVLL-WQSLE-K--------PRAIAL 166 (349)
T ss_dssp CEEEECSS---CSCCCEEEEETTTTEEEEEETT-------TTEEEEEETTSCSCEEEE-CTTCS-C--------EEEEEE
T ss_pred ceEEEeCC---CCCccEEEEecCCCeEEEEcCC-------CCeEEEEcCCCCceEEEE-eCCCC-C--------cceEEE
Confidence 44432111 011134433 6899998643 338999998775543332 11111 1 222333
Q ss_pred --eCCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEE--Ee-cCCcEEEEec-CCEEEEEeCCCCcE
Q 011826 337 --LGGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIK--YL-DDGSLLLFCK-RRALVLYNPVEKNT 410 (476)
Q Consensus 337 --~~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~--~~-~~g~il~~~~-~~~l~~ydl~t~~~ 410 (476)
.+|.|++.+.. ..-.|++.+-.+. . .+ .+- ...+..|-+ +. .++.|++... ...+..+|+++...
T Consensus 167 dp~~g~ly~td~~--~~~~I~r~~~dG~-~--~~--~~~--~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~ 237 (349)
T 3v64_C 167 HPMEGTIYWTDWG--NTPRIEASSMDGS-G--RR--IIA--DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR 237 (349)
T ss_dssp ETTTTEEEEEECS--SSCEEEEEETTSC-S--CE--ESC--CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred ecCcCeEEEeccC--CCCEEEEEeCCCC-C--cE--EEE--ECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCce
Confidence 36888888752 2345666653331 1 11 110 112234543 33 2445555543 45788888887654
Q ss_pred EEE
Q 011826 411 RYL 413 (476)
Q Consensus 411 ~~v 413 (476)
+.+
T Consensus 238 ~~~ 240 (349)
T 3v64_C 238 KAV 240 (349)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 118
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=36.38 E-value=2.3e+02 Score=25.16 Aligned_cols=199 Identities=10% Similarity=-0.002 Sum_probs=0.0
Q ss_pred EEecccceEEEeecCCCccEEEEccccc----ceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEE
Q 011826 175 IVNSCNGFLCLRKPFHRNPCIICNPITG----EYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTA 250 (476)
Q Consensus 175 ~~~s~~GLlcl~~~~~~~~~~V~NP~T~----~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~ 250 (476)
+.-+.+|-+++... ++.+.|||..++ ....++.... ......+.+++..+ .+.+...+ ..+
T Consensus 57 ~~~~~~~~~l~~~~--dg~i~iw~~~~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~---~l~~~~~d---~~i 121 (337)
T 1gxr_A 57 VTISNPTRHVYTGG--KGCVKVWDISHPGNKSPVSQLDCLNR-------DNYIRSCKLLPDGC---TLIVGGEA---STL 121 (337)
T ss_dssp EEECSSSSEEEEEC--BSEEEEEETTSTTCCSCSEEEECSCT-------TSBEEEEEECTTSS---EEEEEESS---SEE
T ss_pred EEEecCCcEEEEcC--CCeEEEEECCCCCceeeeecccccCC-------CCcEEEEEEcCCCC---EEEEEcCC---CcE
Q ss_pred EEEEeCCCceEEccCCCCCCccCc-cceEEcceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCc
Q 011826 251 EIYSLGGAAWRKVGNAPWSPIAGL-FPTYLNGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNL 329 (476)
Q Consensus 251 eVyss~t~~Wr~~~~~p~~~~~~~-~~v~~~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~ 329 (476)
.+|+..++..............-. -...-+|.....+.. ...|..+|+.+.+....--.......
T Consensus 122 ~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-------dg~v~~~d~~~~~~~~~~~~~~~~i~------- 187 (337)
T 1gxr_A 122 SIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCS-------DGNIAVWDLHNQTLVRQFQGHTDGAS------- 187 (337)
T ss_dssp EEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEET-------TSCEEEEETTTTEEEEEECCCSSCEE-------
T ss_pred EEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeC-------CCcEEEEeCCCCceeeeeecccCceE-------
Q ss_pred ceeeEEeeCCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCC-cEEEEecCCEEEEEeCCCC
Q 011826 330 YDMNLGVLGGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDG-SLLLFCKRRALVLYNPVEK 408 (476)
Q Consensus 330 ~~~~L~~~~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g-~il~~~~~~~l~~ydl~t~ 408 (476)
.+....-+..|..... +..+.+|-++ .......+.. .....-+.+..+| .++....++.+..||++++
T Consensus 188 -~~~~~~~~~~l~~~~~--dg~i~~~d~~------~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~ 256 (337)
T 1gxr_A 188 -CIDISNDGTKLWTGGL--DNTVRSWDLR------EGRQLQQHDF--TSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKP 256 (337)
T ss_dssp -EEEECTTSSEEEEEET--TSEEEEEETT------TTEEEEEEEC--SSCEEEEEECTTSSEEEEEETTSCEEEEETTSS
T ss_pred -EEEECCCCCEEEEEec--CCcEEEEECC------CCceEeeecC--CCceEEEEECCCCCEEEEEcCCCcEEEEECCCC
Q ss_pred cEEEE
Q 011826 409 NTRYL 413 (476)
Q Consensus 409 ~~~~v 413 (476)
+...+
T Consensus 257 ~~~~~ 261 (337)
T 1gxr_A 257 DKYQL 261 (337)
T ss_dssp CEEEE
T ss_pred CeEEE
No 119
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=35.89 E-value=2.4e+02 Score=25.22 Aligned_cols=143 Identities=13% Similarity=0.105 Sum_probs=75.1
Q ss_pred cEEEEEEeCCC--ceEEccCCCCCCccCccceEEcceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCc
Q 011826 248 RTAEIYSLGGA--AWRKVGNAPWSPIAGLFPTYLNGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKT 325 (476)
Q Consensus 248 ~~~eVyss~t~--~Wr~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~ 325 (476)
..+.+++..+| .|+.-...... .+...+.-+|.++. +. ...|..||...+.-..+..|....
T Consensus 15 ~~v~~~d~~tG~~~w~~~~~~~~~--~~~~~~~pdG~ilv-s~--------~~~V~~~d~~G~~~W~~~~~~~~~----- 78 (276)
T 3no2_A 15 NKIAIINKDTKEIVWEYPLEKGWE--CNSVAATKAGEILF-SY--------SKGAKMITRDGRELWNIAAPAGCE----- 78 (276)
T ss_dssp SEEEEEETTTTEEEEEEECCTTCC--CCEEEECTTSCEEE-EC--------BSEEEEECTTSCEEEEEECCTTCE-----
T ss_pred CEEEEEECCCCeEEEEeCCCccCC--CcCeEECCCCCEEE-eC--------CCCEEEECCCCCEEEEEcCCCCcc-----
Confidence 46778887777 47755422100 01122333777666 32 227999999554444455542211
Q ss_pred cCCcceeeEEeeCCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCC---CcceeeEEEEecCCcEEEEe-cCCEEE
Q 011826 326 RDNLYDMNLGVLGGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNG---YFGICRPIKYLDDGSLLLFC-KRRALV 401 (476)
Q Consensus 326 ~~~~~~~~L~~~~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~---~~~~~~p~~~~~~g~il~~~-~~~~l~ 401 (476)
....-..-+|.+.++... ..-.|+.++..+ +..|+.. +... ......-+....+|++++.. .+..++
T Consensus 79 ----~~~~~~~~dG~~lv~~~~--~~~~v~~vd~~G-k~l~~~~--~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~ 149 (276)
T 3no2_A 79 ----MQTARILPDGNALVAWCG--HPSTILEVNMKG-EVLSKTE--FETGIERPHAQFRQINKNKKGNYLVPLFATSEVR 149 (276)
T ss_dssp ----EEEEEECTTSCEEEEEES--TTEEEEEECTTS-CEEEEEE--ECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEE
T ss_pred ----ccccEECCCCCEEEEecC--CCCEEEEEeCCC-CEEEEEe--ccCCCCcccccccCceECCCCCEEEEecCCCEEE
Confidence 011112235667666542 145667776544 4455543 2221 01111123456778877765 467899
Q ss_pred EEeCCCCcEEEEEE
Q 011826 402 LYNPVEKNTRYLLI 415 (476)
Q Consensus 402 ~ydl~t~~~~~v~i 415 (476)
.||++.+.+.++..
T Consensus 150 ~~d~~G~~~w~~~~ 163 (276)
T 3no2_A 150 EIAPNGQLLNSVKL 163 (276)
T ss_dssp EECTTSCEEEEEEC
T ss_pred EECCCCCEEEEEEC
Confidence 99999666666654
No 120
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=35.87 E-value=2.3e+02 Score=24.91 Aligned_cols=190 Identities=7% Similarity=-0.045 Sum_probs=89.3
Q ss_pred ccceEEEeecCCCccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCCC
Q 011826 179 CNGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGGA 258 (476)
Q Consensus 179 ~~GLlcl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t~ 258 (476)
.+++|+... .++.+.|||..+++....-... ......+.+++.. .+ +.....+ -.+.+|+....
T Consensus 28 ~~~~l~s~~--~dg~v~vw~~~~~~~~~~~~~~--------~~~v~~~~~~~~~-~~--l~~~~~d---g~i~~~~~~~~ 91 (313)
T 3odt_A 28 DDSKVASVS--RDGTVRLWSKDDQWLGTVVYTG--------QGFLNSVCYDSEK-EL--LLFGGKD---TMINGVPLFAT 91 (313)
T ss_dssp ETTEEEEEE--TTSEEEEEEESSSEEEEEEEEC--------SSCEEEEEEETTT-TE--EEEEETT---SCEEEEETTCC
T ss_pred CCCEEEEEE--cCCcEEEEECCCCEEEEEeecC--------CccEEEEEECCCC-CE--EEEecCC---CeEEEEEeeec
Confidence 344544333 3567999999887654433211 1234556676642 22 2222322 34666665442
Q ss_pred c-eEEccCCCCCCccCccceEEcceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCcceeeEEee
Q 011826 259 A-WRKVGNAPWSPIAGLFPTYLNGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMNLGVL 337 (476)
Q Consensus 259 ~-Wr~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~~~L~~~ 337 (476)
. .+.+..... .......+..+|.+...+.. ...|..+|.. +....+....... ........
T Consensus 92 ~~~~~~~~~~~-~~~~i~~~~~~~~~l~~~~~-------d~~i~~~d~~-~~~~~~~~~~~~v---------~~~~~~~~ 153 (313)
T 3odt_A 92 SGEDPLYTLIG-HQGNVCSLSFQDGVVISGSW-------DKTAKVWKEG-SLVYNLQAHNASV---------WDAKVVSF 153 (313)
T ss_dssp TTSCC-CEECC-CSSCEEEEEEETTEEEEEET-------TSEEEEEETT-EEEEEEECCSSCE---------EEEEEEET
T ss_pred CCCCcccchhh-cccCEEEEEecCCEEEEEeC-------CCCEEEEcCC-cEEEecccCCCce---------eEEEEccC
Confidence 1 111111000 00011344556665444432 2378888832 2222332221100 12222232
Q ss_pred CCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEEecCCEEEEEeCCCCcEE
Q 011826 338 GGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLFCKRRALVLYNPVEKNTR 411 (476)
Q Consensus 338 ~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~~~~~~l~~ydl~t~~~~ 411 (476)
++.+.++.. .+..+.+|-.. . ....+.........-+.+..++.++....++.+..||+++++..
T Consensus 154 ~~~~l~~~~-~d~~i~i~d~~------~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~ 218 (313)
T 3odt_A 154 SENKFLTAS-ADKTIKLWQND------K--VIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVL 218 (313)
T ss_dssp TTTEEEEEE-TTSCEEEEETT------E--EEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEE
T ss_pred CCCEEEEEE-CCCCEEEEecC------c--eEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhh
Confidence 455544443 46789999622 1 12222221122223455666777666677889999999877643
No 121
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=35.74 E-value=2.7e+02 Score=25.73 Aligned_cols=193 Identities=7% Similarity=-0.017 Sum_probs=0.0
Q ss_pred cceEEEeecCCCccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCCCc
Q 011826 180 NGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGGAA 259 (476)
Q Consensus 180 ~GLlcl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t~~ 259 (476)
+|.++.... +..+.+||..+++....-... ......+.+++... .+.....+ ..+.+|+..++.
T Consensus 217 ~~~~~~~~~--~g~i~~~d~~~~~~~~~~~~~--------~~~i~~~~~~~~~~---~l~~~~~d---~~i~i~d~~~~~ 280 (425)
T 1r5m_A 217 DDKFVIPGP--KGAIFVYQITEKTPTGKLIGH--------HGPISVLEFNDTNK---LLLSASDD---GTLRIWHGGNGN 280 (425)
T ss_dssp TTEEEEECG--GGCEEEEETTCSSCSEEECCC--------SSCEEEEEEETTTT---EEEEEETT---SCEEEECSSSBS
T ss_pred CCEEEEEcC--CCeEEEEEcCCCceeeeeccC--------CCceEEEEECCCCC---EEEEEcCC---CEEEEEECCCCc
Q ss_pred eEEccCCCCCCccCccceEEcceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCcceeeEEeeCC
Q 011826 260 WRKVGNAPWSPIAGLFPTYLNGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMNLGVLGG 339 (476)
Q Consensus 260 Wr~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~~~L~~~~G 339 (476)
-...-........ ...+.... +.++.. ....|..+|+.+.+....-...... ...+.-...
T Consensus 281 ~~~~~~~~~~~i~--~~~~~~~~-~l~~~~------~d~~i~i~d~~~~~~~~~~~~~~~~----------i~~~~~s~~ 341 (425)
T 1r5m_A 281 SQNCFYGHSQSIV--SASWVGDD-KVISCS------MDGSVRLWSLKQNTLLALSIVDGVP----------IFAGRISQD 341 (425)
T ss_dssp CSEEECCCSSCEE--EEEEETTT-EEEEEE------TTSEEEEEETTTTEEEEEEECTTCC----------EEEEEECTT
T ss_pred cceEecCCCccEE--EEEECCCC-EEEEEe------CCCcEEEEECCCCcEeEecccCCcc----------EEEEEEcCC
Q ss_pred eEEEEecCCCCCeEEEeeccCC--------------CCcceEEEEEEeCCCcc-eeeEEEEecCC-cEEEEecCCEEEEE
Q 011826 340 CLSICDVTYFAPPDIWVMKDYG--------------VQESWIKQLSVDNGYFG-ICRPIKYLDDG-SLLLFCKRRALVLY 403 (476)
Q Consensus 340 ~L~~~~~~~~~~l~IWvl~~~~--------------~~~~W~~~~~I~~~~~~-~~~p~~~~~~g-~il~~~~~~~l~~y 403 (476)
.-.++....+..+.||-++... ....+.....+...... ...-+.+..+| .++....++.+..|
T Consensus 342 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw 421 (425)
T 1r5m_A 342 GQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVV 421 (425)
T ss_dssp SSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEE
T ss_pred CCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEE
Q ss_pred eCCC
Q 011826 404 NPVE 407 (476)
Q Consensus 404 dl~t 407 (476)
|++.
T Consensus 422 ~~~g 425 (425)
T 1r5m_A 422 AIPG 425 (425)
T ss_dssp ECCC
T ss_pred eecC
No 122
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=35.62 E-value=2.5e+02 Score=25.42 Aligned_cols=138 Identities=7% Similarity=-0.012 Sum_probs=71.7
Q ss_pred cEEEEEEeCCCceEEccCCCCCCccCccceEE--cceEEEEEeeccCCCCCcceEEEEECCCceEEEE-cCCCCCCCCCC
Q 011826 248 RTAEIYSLGGAAWRKVGNAPWSPIAGLFPTYL--NGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVI-PAPPHFAEKPK 324 (476)
Q Consensus 248 ~~~eVyss~t~~Wr~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i-~lP~~~~~~~~ 324 (476)
..+.+|+..++.|+.+........ ....+.+ +|.+...+.. ...|..+|+.+.++... .+..... .
T Consensus 30 ~~v~i~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~~~~~-------dg~i~vwd~~~~~~~~~~~~~~~~~-~-- 98 (372)
T 1k8k_C 30 HEVHIYEKSGNKWVQVHELKEHNG-QVTGVDWAPDSNRIVTCGT-------DRNAYVWTLKGRTWKPTLVILRINR-A-- 98 (372)
T ss_dssp SEEEEEEEETTEEEEEEEEECCSS-CEEEEEEETTTTEEEEEET-------TSCEEEEEEETTEEEEEEECCCCSS-C--
T ss_pred CEEEEEeCCCCcEEeeeeecCCCC-cccEEEEeCCCCEEEEEcC-------CCeEEEEECCCCeeeeeEEeecCCC-c--
Confidence 478899998887665542211000 0012222 3544333322 23788999988876543 2222211 0
Q ss_pred ccCCcceeeEEe-eCCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEE-ecCCEEEE
Q 011826 325 TRDNLYDMNLGV-LGGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLF-CKRRALVL 402 (476)
Q Consensus 325 ~~~~~~~~~L~~-~~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~-~~~~~l~~ 402 (476)
...+.- -+|.+.++.. .+..+.+|-++.. ..|.....+.........-+.+..++..++. ..++.+..
T Consensus 99 ------v~~~~~~~~~~~l~~~~-~d~~v~i~d~~~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~ 168 (372)
T 1k8k_C 99 ------ARCVRWAPNEKKFAVGS-GSRVISICYFEQE---NDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRI 168 (372)
T ss_dssp ------EEEEEECTTSSEEEEEE-TTSSEEEEEEETT---TTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred ------eeEEEECCCCCEEEEEe-CCCEEEEEEecCC---CcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEE
Confidence 111221 1344444333 4678999998754 3455444443332222344556667765554 45678899
Q ss_pred EeCC
Q 011826 403 YNPV 406 (476)
Q Consensus 403 ydl~ 406 (476)
||++
T Consensus 169 ~d~~ 172 (372)
T 1k8k_C 169 FSAY 172 (372)
T ss_dssp EECC
T ss_pred EEcc
Confidence 9954
No 123
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=35.34 E-value=2.6e+02 Score=25.51 Aligned_cols=180 Identities=14% Similarity=0.039 Sum_probs=88.5
Q ss_pred ccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCC---Cc-eEEccCCC
Q 011826 192 NPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGG---AA-WRKVGNAP 267 (476)
Q Consensus 192 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t---~~-Wr~~~~~p 267 (476)
..+.+.++.+++...+-+. .....++.+|+..+ +|+..... ...+..++..+ ++ -+.+-. .
T Consensus 10 ~~I~~i~~~~~~~~~~~~~---------~~~p~g~~~d~~~~--~ly~~D~~---~~~I~~~~~~g~~~~~~~~~~~~-~ 74 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPN---------LRNVVALDTEVASN--RIYWSDLS---QRMICSTQLDRAHGVSSYDTVIS-R 74 (316)
T ss_dssp SSEEEEETTSCCCEEEECS---------CSSEEEEEEETTTT--EEEEEETT---TTEEEEEEC--------CEEEEC-S
T ss_pred CeEEEEECCCcceEehhcC---------CCceEEEEEEeCCC--EEEEEECC---CCcEEEEECCCCCCCcccEEEEe-C
Confidence 3577778777765443221 11357888887544 34433222 24566676655 12 122111 0
Q ss_pred CCCccCccceE---EcceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCcceeeEEe--eCCeEE
Q 011826 268 WSPIAGLFPTY---LNGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMNLGV--LGGCLS 342 (476)
Q Consensus 268 ~~~~~~~~~v~---~~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~~~L~~--~~G~L~ 342 (476)
.+....++. .+|.+||.... ...|..+|+....-..+- ..... . ...++. .+|.|+
T Consensus 75 --~~~~p~glavd~~~~~ly~~d~~-------~~~I~~~~~~g~~~~~~~-~~~~~-~--------P~~iavdp~~g~ly 135 (316)
T 1ijq_A 75 --DIQAPDGLAVDWIHSNIYWTDSV-------LGTVSVADTKGVKRKTLF-RENGS-K--------PRAIVVDPVHGFMY 135 (316)
T ss_dssp --SCSCCCEEEEETTTTEEEEEETT-------TTEEEEEETTSSSEEEEE-ECTTC-C--------EEEEEEETTTTEEE
T ss_pred --CCCCcCEEEEeecCCeEEEEECC-------CCEEEEEeCCCCceEEEE-ECCCC-C--------cceEEeCCCCCEEE
Confidence 011113444 36899998643 338999999875544332 11111 1 222333 468888
Q ss_pred EEecCCCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEE--EecC-CcEEEEec-CCEEEEEeCCCCcEEEEE
Q 011826 343 ICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIK--YLDD-GSLLLFCK-RRALVLYNPVEKNTRYLL 414 (476)
Q Consensus 343 ~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~--~~~~-g~il~~~~-~~~l~~ydl~t~~~~~v~ 414 (476)
+++.. ..-.|++.+-.+. -.+ .+-.. .+..|-+ +..+ +.|++... ...+..+|+++...+.+-
T Consensus 136 ~~d~~--~~~~I~~~~~dG~---~~~--~~~~~--~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~ 202 (316)
T 1ijq_A 136 WTDWG--TPAKIKKGGLNGV---DIY--SLVTE--NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTIL 202 (316)
T ss_dssp EEECS--SSCEEEEEETTSC---CEE--EEECS--SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred EEccC--CCCeEEEEcCCCC---CeE--EEEEC--CCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEe
Confidence 88652 2235666653331 111 11111 1234543 3323 45555543 358899999876655553
No 124
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=34.93 E-value=3.5e+02 Score=27.36 Aligned_cols=123 Identities=10% Similarity=0.094 Sum_probs=60.6
Q ss_pred cceEEcceEEEEEeeccCCCCCcceEEEEEC-CC--ceEEEEcCCCCCCCCCCccCCcceeeEEeeCCeEEEEecCCCCC
Q 011826 275 FPTYLNGVIHWVCDDIEDDQSCSDCIVGFDF-ED--ERFCVIPAPPHFAEKPKTRDNLYDMNLGVLGGCLSICDVTYFAP 351 (476)
Q Consensus 275 ~~v~~~G~lywl~~~~~~~~~~~~~Il~fD~-~~--e~f~~i~lP~~~~~~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~ 351 (476)
.++..+|.+|..... ...|.++|. .+ +.|+. .++..........++.....++..+|.|++... +.
T Consensus 57 ~P~v~~g~vyv~~~~-------~~~v~AlD~~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~--dg- 125 (571)
T 2ad6_A 57 APLVIGDMMYVHSAF-------PNNTYALNLNDPGKIVWQH-KPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA--NG- 125 (571)
T ss_dssp CCEEETTEEEEECST-------TTCEEEEETTCTTSEEEEE-CCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT--TS-
T ss_pred ccEEECCEEEEEeCC-------CCEEEEEeCCCCccEEEEE-cCCCCccccccccccccccccEEECCEEEEEeC--CC-
Confidence 678889999987641 227999998 54 45554 333211000000000001123445677766543 12
Q ss_pred eEEEeeccCCCCcceEEEEEEe-CCCcceeeEEEEecCCcEEEEec------CCEEEEEeCCCCcEE
Q 011826 352 PDIWVMKDYGVQESWIKQLSVD-NGYFGICRPIKYLDDGSLLLFCK------RRALVLYNPVEKNTR 411 (476)
Q Consensus 352 l~IWvl~~~~~~~~W~~~~~I~-~~~~~~~~p~~~~~~g~il~~~~------~~~l~~ydl~t~~~~ 411 (476)
.|..++-...+..|+....-. ........|+. .+|.|++... ++.++.+|.+|++..
T Consensus 126 -~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~ 189 (571)
T 2ad6_A 126 -HLLALDAKTGKINWEVEVCDPKVGSTLTQAPFV--AKDTVLMGCSGAELGVRGAVNAFDLKTGELK 189 (571)
T ss_dssp -EEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE--ETTEEEEECBCGGGTCCCEEEEEETTTCCEE
T ss_pred -EEEEEECCCCCEEEEecCCCCCccceeccCCEE--ECCEEEEEecCCccCCCCEEEEEECCCCcEE
Confidence 344454322245676531100 00011123432 3456666554 578999999988754
No 125
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=34.87 E-value=2.6e+02 Score=25.33 Aligned_cols=197 Identities=14% Similarity=0.095 Sum_probs=93.4
Q ss_pred cccceEEEeecCCCccEEEEcccccc---eeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEE
Q 011826 178 SCNGFLCLRKPFHRNPCIICNPITGE---YVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYS 254 (476)
Q Consensus 178 s~~GLlcl~~~~~~~~~~V~NP~T~~---~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVys 254 (476)
+.+|-+++... .+..+.|||..+++ ...++.. ......+.+++. +.+ +.....+ ..+.+|+
T Consensus 17 s~~~~~l~~~~-~d~~v~i~~~~~~~~~~~~~~~~h---------~~~v~~~~~~~~-~~~--l~~~~~d---g~i~vwd 80 (372)
T 1k8k_C 17 NKDRTQIAICP-NNHEVHIYEKSGNKWVQVHELKEH---------NGQVTGVDWAPD-SNR--IVTCGTD---RNAYVWT 80 (372)
T ss_dssp CTTSSEEEEEC-SSSEEEEEEEETTEEEEEEEEECC---------SSCEEEEEEETT-TTE--EEEEETT---SCEEEEE
T ss_pred CCCCCEEEEEe-CCCEEEEEeCCCCcEEeeeeecCC---------CCcccEEEEeCC-CCE--EEEEcCC---CeEEEEE
Confidence 33454333332 24679999999985 3333321 113456667763 333 2232322 4688999
Q ss_pred eCCCceEEccCCCCCCccCccceEE--cceEEEEEeeccCCCCCcceEEEEECCCce----EEEEcCCCCCCCCCCccCC
Q 011826 255 LGGAAWRKVGNAPWSPIAGLFPTYL--NGVIHWVCDDIEDDQSCSDCIVGFDFEDER----FCVIPAPPHFAEKPKTRDN 328 (476)
Q Consensus 255 s~t~~Wr~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~Il~fD~~~e~----f~~i~lP~~~~~~~~~~~~ 328 (476)
..++.+........... ....+.+ +|.+...+.. ...|..+|+.+.. ...+..+... .
T Consensus 81 ~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~-------d~~v~i~d~~~~~~~~~~~~~~~~~~~--~------ 144 (372)
T 1k8k_C 81 LKGRTWKPTLVILRINR-AARCVRWAPNEKKFAVGSG-------SRVISICYFEQENDWWVCKHIKKPIRS--T------ 144 (372)
T ss_dssp EETTEEEEEEECCCCSS-CEEEEEECTTSSEEEEEET-------TSSEEEEEEETTTTEEEEEEECTTCCS--C------
T ss_pred CCCCeeeeeEEeecCCC-ceeEEEECCCCCEEEEEeC-------CCEEEEEEecCCCcceeeeeeecccCC--C------
Confidence 98887765432111100 0022222 3443333322 2257777766544 2222222111 0
Q ss_pred cceeeEEee-CCeEEEEecCCCCCeEEEeeccCCC-----Ccce-------EEEEEEeCCCcceeeEEEEecCCcEEEE-
Q 011826 329 LYDMNLGVL-GGCLSICDVTYFAPPDIWVMKDYGV-----QESW-------IKQLSVDNGYFGICRPIKYLDDGSLLLF- 394 (476)
Q Consensus 329 ~~~~~L~~~-~G~L~~~~~~~~~~l~IWvl~~~~~-----~~~W-------~~~~~I~~~~~~~~~p~~~~~~g~il~~- 394 (476)
...+.-. +|.+.++.. .+..+.+|-+..... ...| .....+.. ......-+.+..+|..++.
T Consensus 145 --i~~~~~~~~~~~l~~~~-~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~ 220 (372)
T 1k8k_C 145 --VLSLDWHPNSVLLAAGS-CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSS-SCGWVHGVCFSANGSRVAWV 220 (372)
T ss_dssp --EEEEEECTTSSEEEEEE-TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCC-CSSCEEEEEECSSSSEEEEE
T ss_pred --eeEEEEcCCCCEEEEEc-CCCCEEEEEcccccccccccccccccccchhhheEecCC-CCCeEEEEEECCCCCEEEEE
Confidence 1122222 344444433 467899998642110 1112 22222221 1122233455667765554
Q ss_pred ecCCEEEEEeCCCCcE
Q 011826 395 CKRRALVLYNPVEKNT 410 (476)
Q Consensus 395 ~~~~~l~~ydl~t~~~ 410 (476)
..++.+..||+++++.
T Consensus 221 ~~d~~i~i~d~~~~~~ 236 (372)
T 1k8k_C 221 SHDSTVCLADADKKMA 236 (372)
T ss_dssp ETTTEEEEEEGGGTTE
T ss_pred eCCCEEEEEECCCCce
Confidence 5677899999987764
No 126
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=33.41 E-value=2.9e+02 Score=25.51 Aligned_cols=203 Identities=7% Similarity=-0.074 Sum_probs=0.0
Q ss_pred EEeccc-ceEEEeecCCCccEEEEcccccc------eeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccc
Q 011826 175 IVNSCN-GFLCLRKPFHRNPCIICNPITGE------YVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLN 247 (476)
Q Consensus 175 ~~~s~~-GLlcl~~~~~~~~~~V~NP~T~~------~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~ 247 (476)
+.-+.+ |-+++... .+..+.|||..+++ ....+.... ........+.+.+..+.+-+..-....
T Consensus 119 ~~~~~~~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~l~~~~~dg~--- 189 (416)
T 2pm9_A 119 VKFNAKQDNVLASGG-NNGEIFIWDMNKCTESPSNYTPLTPGQSM-----SSVDEVISLAWNQSLAHVFASAGSSNF--- 189 (416)
T ss_dssp EEECSSSTTBEEEEC-SSSCEEBCBTTTTSSCTTTCCCBCCCCSC-----CSSCCCCEEEECSSCTTEEEEESSSSC---
T ss_pred EEEcCCCCCEEEEEc-CCCeEEEEECCCCcccccccccccccccc-----CCCCCeeEEEeCCCCCcEEEEEcCCCC---
Q ss_pred cEEEEEEeCCCceEEccCCCC-----CCccCccceEEcceEEEEEeeccCCCCCcc---eEEEEECCCceEEEEcCC-CC
Q 011826 248 RTAEIYSLGGAAWRKVGNAPW-----SPIAGLFPTYLNGVIHWVCDDIEDDQSCSD---CIVGFDFEDERFCVIPAP-PH 318 (476)
Q Consensus 248 ~~~eVyss~t~~Wr~~~~~p~-----~~~~~~~~v~~~G~lywl~~~~~~~~~~~~---~Il~fD~~~e~f~~i~lP-~~ 318 (476)
+.+|+..++.-...-.... ......-...-+|.-+.++.. ... .|..+|+.+..-....+. ..
T Consensus 190 --v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~------~d~~~~~i~~~d~~~~~~~~~~~~~~~ 261 (416)
T 2pm9_A 190 --ASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATAT------GSDNDPSILIWDLRNANTPLQTLNQGH 261 (416)
T ss_dssp --EEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEE------CCSSSCCCCEEETTSTTSCSBCCCSCC
T ss_pred --EEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEE------CCCCCceEEEEeCCCCCCCcEEeecCc
Q ss_pred CCCCCCccCCcceeeEEeeCCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCC-cEEEE-ec
Q 011826 319 FAEKPKTRDNLYDMNLGVLGGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDG-SLLLF-CK 396 (476)
Q Consensus 319 ~~~~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g-~il~~-~~ 396 (476)
.... ..+.....+|.+.++.. .+..+.||-++ .......+....... .-+.+..++ .+++. ..
T Consensus 262 ~~~v-------~~~~~s~~~~~~l~s~~-~dg~v~~wd~~------~~~~~~~~~~~~~~v-~~~~~s~~~~~~l~s~~~ 326 (416)
T 2pm9_A 262 QKGI-------LSLDWCHQDEHLLLSSG-RDNTVLLWNPE------SAEQLSQFPARGNWC-FKTKFAPEAPDLFACASF 326 (416)
T ss_dssp SSCE-------EEEEECSSCSSCEEEEE-SSSEEEEECSS------SCCEEEEEECSSSCC-CCEEECTTCTTEEEECCS
T ss_pred cCce-------eEEEeCCCCCCeEEEEe-CCCCEEEeeCC------CCccceeecCCCCce-EEEEECCCCCCEEEEEec
Q ss_pred CCEEEEEeCCCCc
Q 011826 397 RRALVLYNPVEKN 409 (476)
Q Consensus 397 ~~~l~~ydl~t~~ 409 (476)
++.+..||+++.+
T Consensus 327 d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 327 DNKIEVQTLQNLT 339 (416)
T ss_dssp SSEEEEEESCCCC
T ss_pred CCcEEEEEccCCC
No 127
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=32.96 E-value=1.5e+02 Score=30.81 Aligned_cols=122 Identities=9% Similarity=0.070 Sum_probs=58.5
Q ss_pred cceEEcceEEEEEeeccCCCCCcceEEEEECCCc--eEEEEcCCCCCCCCCCccCCcceeeEEeeCCeEEEEecCCCCCe
Q 011826 275 FPTYLNGVIHWVCDDIEDDQSCSDCIVGFDFEDE--RFCVIPAPPHFAEKPKTRDNLYDMNLGVLGGCLSICDVTYFAPP 352 (476)
Q Consensus 275 ~~v~~~G~lywl~~~~~~~~~~~~~Il~fD~~~e--~f~~i~lP~~~~~~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~l 352 (476)
.++..+|.+|..... ..|.++|..+. .|+. .++..........++.....+...+|.|++... +.
T Consensus 72 ~P~v~~g~vyv~~~~--------~~v~AlD~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~--dg-- 138 (677)
T 1kb0_A 72 TPVVVDGIMYVSASW--------SVVHAIDTRTGNRIWTY-DPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW--DG-- 138 (677)
T ss_dssp CCEEETTEEEEECGG--------GCEEEEETTTTEEEEEE-CCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT--TS--
T ss_pred CCEEECCEEEEECCC--------CeEEEEECCCCcEEEEE-cCCCCccccccccccCCCCCceEECCEEEEEcC--CC--
Confidence 678899999987642 27999998664 4543 222111000000000001223445666666543 22
Q ss_pred EEEeeccCCCCcceEEEEEEeCC--CcceeeEEEEecCCcEEEEec------CCEEEEEeCCCCcEE
Q 011826 353 DIWVMKDYGVQESWIKQLSVDNG--YFGICRPIKYLDDGSLLLFCK------RRALVLYNPVEKNTR 411 (476)
Q Consensus 353 ~IWvl~~~~~~~~W~~~~~I~~~--~~~~~~p~~~~~~g~il~~~~------~~~l~~ydl~t~~~~ 411 (476)
.|..++-...+..|+.....+.. ......|+. .++.|++... ++.++.||.+|++..
T Consensus 139 ~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~ 203 (677)
T 1kb0_A 139 RLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERK 203 (677)
T ss_dssp EEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred EEEEEECCCCCEEeeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEE
Confidence 23444322124556643110000 011123332 3455555443 478999999988754
No 128
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=32.56 E-value=2e+02 Score=29.93 Aligned_cols=122 Identities=11% Similarity=0.101 Sum_probs=58.2
Q ss_pred cceEEcceEEEEEeeccCCCCCcceEEEEECCC--ceEEEEcCCCCCCCCCCccCCcceeeEEeeCCeEEEEecCCCCCe
Q 011826 275 FPTYLNGVIHWVCDDIEDDQSCSDCIVGFDFED--ERFCVIPAPPHFAEKPKTRDNLYDMNLGVLGGCLSICDVTYFAPP 352 (476)
Q Consensus 275 ~~v~~~G~lywl~~~~~~~~~~~~~Il~fD~~~--e~f~~i~lP~~~~~~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~l 352 (476)
.++..+|.+|..... ..|.++|..+ +.|+. ..+..........+......+...+|.|++... +.
T Consensus 65 ~P~v~~g~vyv~~~~--------~~v~AlD~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~--dg-- 131 (689)
T 1yiq_A 65 TPIVVDGVMYTTGPF--------SVVYALDARDGRLIWKY-DPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL--DG-- 131 (689)
T ss_dssp CCEEETTEEEEECGG--------GCEEEEETTTCCEEEEE-CCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT--TS--
T ss_pred cCEEECCEEEEEcCC--------CeEEEEECCCCceeEEE-cCCCCccccccccccCCCCccEEECCEEEEEcc--CC--
Confidence 667889999986643 2799999754 55654 222111000000000001123445666665542 22
Q ss_pred EEEeeccCCCCcceEEEEEEeCCC-c-ceeeEEEEecCCcEEEEec------CCEEEEEeCCCCcEE
Q 011826 353 DIWVMKDYGVQESWIKQLSVDNGY-F-GICRPIKYLDDGSLLLFCK------RRALVLYNPVEKNTR 411 (476)
Q Consensus 353 ~IWvl~~~~~~~~W~~~~~I~~~~-~-~~~~p~~~~~~g~il~~~~------~~~l~~ydl~t~~~~ 411 (476)
.|..++-...+..|......+... . ....|+. .+|.|++... ++.++.+|.+|++..
T Consensus 132 ~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~ 196 (689)
T 1yiq_A 132 RLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRV--VNGKVVIGNGGAEFGVRGYVTAYDAETGKEA 196 (689)
T ss_dssp EEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred EEEEEECCCCCEeeeecCcCCCCCCccccCCcEE--ECCEEEEEeCCCccCCCCEEEEEECCCCcEE
Confidence 233333221245566532111110 1 1123432 3455655432 468999999988753
No 129
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=32.21 E-value=86 Score=24.80 Aligned_cols=39 Identities=21% Similarity=0.386 Sum_probs=28.6
Q ss_pred cEEEEccccc-ceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEE
Q 011826 193 PCIICNPITG-EYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLV 241 (476)
Q Consensus 193 ~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~ 241 (476)
.+++.||.|+ .|. |.... ...+.+.+|+..+.|+|+.+.
T Consensus 12 ~V~~~D~~tk~~W~--p~g~~--------~~~V~~~~d~~~~~yRIv~~~ 51 (120)
T 1ddw_A 12 HVFQIDPNTKKNWV--PTSKH--------AVTVSYFYDSTRNVYRIISLD 51 (120)
T ss_dssp EEEEECTTTSCSEE--ESCSS--------CEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEcCCCCCceE--eCCCC--------ceEEEEEEcCCCCEEEEEEcc
Confidence 5889999997 784 43221 145678889988899999865
No 130
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=31.43 E-value=4.4e+02 Score=26.98 Aligned_cols=186 Identities=8% Similarity=-0.015 Sum_probs=88.7
Q ss_pred cEEEEcccc-cceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCCCceEEccCCCCCC-
Q 011826 193 PCIICNPIT-GEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGGAAWRKVGNAPWSP- 270 (476)
Q Consensus 193 ~~~V~NP~T-~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t~~Wr~~~~~p~~~- 270 (476)
.++++|..+ ++...+..... .......+.+ |. +++-++...........+.+++..++..+.+.......
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~------~~~~~~~~~~-pD-g~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~ 335 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKE------QDIYLARVNW-RD-PQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTW 335 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSC------SSEEEEEEEE-EE-TTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSC
T ss_pred EEEEEECCCCCceEEecCCCC------cceEEEEEEe-CC-CCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCc
Confidence 689999999 88776654311 0122344455 43 34433333322222457788888888776554211100
Q ss_pred --ccCccceEEcceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCcceeeE--EeeCC-eEEEEe
Q 011826 271 --IAGLFPTYLNGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMNL--GVLGG-CLSICD 345 (476)
Q Consensus 271 --~~~~~~v~~~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~~~L--~~~~G-~L~~~~ 345 (476)
........-+|.+++.+.. + ....|..+|+.+. ... +...... ...+ ..-+| .|++..
T Consensus 336 ~~~~~~~~~spdg~~~~~~~~---~--g~~~l~~~~~~~~-~~~--l~~~~~~---------v~~~~~~s~dg~~l~~~~ 398 (741)
T 2ecf_A 336 VPLHNSLRFLDDGSILWSSER---T--GFQHLYRIDSKGK-AAA--LTHGNWS---------VDELLAVDEKAGLAYFRA 398 (741)
T ss_dssp CCCCSCCEECTTSCEEEEECT---T--SSCEEEEECSSSC-EEE--SCCSSSC---------EEEEEEEETTTTEEEEEE
T ss_pred CCcCCceEECCCCeEEEEecC---C--CccEEEEEcCCCC-eee--eeecceE---------EEeEeEEeCCCCEEEEEE
Confidence 0001122236777776643 2 2237888887665 333 3222110 1122 22245 455544
Q ss_pred cCC-CCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEEe-c----CCEEEEEeCCCCcE
Q 011826 346 VTY-FAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLFC-K----RRALVLYNPVEKNT 410 (476)
Q Consensus 346 ~~~-~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~~-~----~~~l~~ydl~t~~~ 410 (476)
... ...+.||.++..+. . ...+.. ......+.+..+|+.++.. . ...++.+|.+++.+
T Consensus 399 ~~~~~~~~~l~~~~~~g~-~----~~~l~~--~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~~~ 462 (741)
T 2ecf_A 399 GIESARESQIYAVPLQGG-Q----PQRLSK--APGMHSASFARNASVYVDSWSNNSTPPQIELFRANGEKI 462 (741)
T ss_dssp CSSCTTCBEEEEEETTCC-C----CEECCC--SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTSCEE
T ss_pred eCCCCceEEEEEEEcCCC-C----eeeccc--CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCCCeE
Confidence 321 23789999874331 1 112221 1111234556667544332 1 23567777655443
No 131
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=31.30 E-value=3.3e+02 Score=25.42 Aligned_cols=196 Identities=9% Similarity=-0.015 Sum_probs=93.2
Q ss_pred ccceEEEeecCCCccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCCC
Q 011826 179 CNGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGGA 258 (476)
Q Consensus 179 ~~GLlcl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t~ 258 (476)
.+|-+++... .++.+.|||..+++....-.... .....+.+++ + .+.....+ -.+.+|+..+.
T Consensus 144 ~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~--------~~v~~~~~~~---~--~l~~~~~d---g~i~i~d~~~~ 206 (401)
T 4aez_A 144 HDGSFLSVGL-GNGLVDIYDVESQTKLRTMAGHQ--------ARVGCLSWNR---H--VLSSGSRS---GAIHHHDVRIA 206 (401)
T ss_dssp TTSSEEEEEE-TTSCEEEEETTTCCEEEEECCCS--------SCEEEEEEET---T--EEEEEETT---SEEEEEETTSS
T ss_pred CCCCEEEEEC-CCCeEEEEECcCCeEEEEecCCC--------CceEEEEECC---C--EEEEEcCC---CCEEEEecccC
Confidence 3553333332 24579999998877543322111 1234445544 2 23333332 46788888743
Q ss_pred ceE--EccCCCCCCccCccceEE--cceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCcceeeE
Q 011826 259 AWR--KVGNAPWSPIAGLFPTYL--NGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMNL 334 (476)
Q Consensus 259 ~Wr--~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~~~L 334 (476)
.-. ...... ... .++.+ +|.+...+.. ...|..+|+.+.+....-....... ..+..
T Consensus 207 ~~~~~~~~~~~-~~v---~~~~~~~~~~~l~s~~~-------d~~v~iwd~~~~~~~~~~~~~~~~v--------~~~~~ 267 (401)
T 4aez_A 207 NHQIGTLQGHS-SEV---CGLAWRSDGLQLASGGN-------DNVVQIWDARSSIPKFTKTNHNAAV--------KAVAW 267 (401)
T ss_dssp SCEEEEEECCS-SCE---EEEEECTTSSEEEEEET-------TSCEEEEETTCSSEEEEECCCSSCC--------CEEEE
T ss_pred cceeeEEcCCC-CCe---eEEEEcCCCCEEEEEeC-------CCeEEEccCCCCCccEEecCCcceE--------EEEEE
Confidence 211 111110 000 22222 3444333322 2379999998765433221111100 01112
Q ss_pred EeeCCeEEEEec-CCCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEEe---cCCEEEEEeCCCCcE
Q 011826 335 GVLGGCLSICDV-TYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLFC---KRRALVLYNPVEKNT 410 (476)
Q Consensus 335 ~~~~G~L~~~~~-~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~~---~~~~l~~ydl~t~~~ 410 (476)
...++.|.++.. ..+..+.+|-+.... ....+... ....-+.+..+|..++.. .++.+..||+++.+.
T Consensus 268 ~p~~~~ll~~~~gs~d~~i~i~d~~~~~------~~~~~~~~--~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~ 339 (401)
T 4aez_A 268 CPWQSNLLATGGGTMDKQIHFWNAATGA------RVNTVDAG--SQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGL 339 (401)
T ss_dssp CTTSTTEEEEECCTTTCEEEEEETTTCC------EEEEEECS--SCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEE
T ss_pred CCCCCCEEEEecCCCCCEEEEEECCCCC------EEEEEeCC--CcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccc
Confidence 222234444332 246779999876421 22333332 122345566777766653 478999999998766
Q ss_pred EEE-EEeeC
Q 011826 411 RYL-LIHED 418 (476)
Q Consensus 411 ~~v-~i~g~ 418 (476)
..+ .+.+.
T Consensus 340 ~~~~~~~~h 348 (401)
T 4aez_A 340 TKQVDIPAH 348 (401)
T ss_dssp EEEEEEECC
T ss_pred eeEEEecCC
Confidence 554 34443
No 132
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=30.83 E-value=2.9e+02 Score=24.64 Aligned_cols=31 Identities=6% Similarity=0.040 Sum_probs=23.3
Q ss_pred cceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCC
Q 011826 280 NGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPP 317 (476)
Q Consensus 280 ~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~ 317 (476)
+|.+||.... ...|..+|..+.+...+..|.
T Consensus 24 ~~~l~~~d~~-------~~~i~~~d~~~~~~~~~~~~~ 54 (297)
T 3g4e_A 24 SNSLLFVDIP-------AKKVCRWDSFTKQVQRVTMDA 54 (297)
T ss_dssp TTEEEEEETT-------TTEEEEEETTTCCEEEEECSS
T ss_pred CCEEEEEECC-------CCEEEEEECCCCcEEEEeCCC
Confidence 4789998643 348999999988877776653
No 133
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=30.67 E-value=3.2e+02 Score=28.23 Aligned_cols=121 Identities=12% Similarity=0.130 Sum_probs=58.3
Q ss_pred cceEEcceEEEEEeeccCCCCCcceEEEEECCC--ceEEEEcCCCCCCCCCCccCCcceeeEEeeCCeEEEEecCCCCCe
Q 011826 275 FPTYLNGVIHWVCDDIEDDQSCSDCIVGFDFED--ERFCVIPAPPHFAEKPKTRDNLYDMNLGVLGGCLSICDVTYFAPP 352 (476)
Q Consensus 275 ~~v~~~G~lywl~~~~~~~~~~~~~Il~fD~~~--e~f~~i~lP~~~~~~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~l 352 (476)
.++..+|.+|..... ..|.++|..+ +.|+. .++..........+......+...+|.+++... +.
T Consensus 61 ~P~v~~g~vyv~~~~--------~~v~AlD~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~--dg-- 127 (668)
T 1kv9_A 61 TPLFHDGVIYTSMSW--------SRVIAVDAASGKELWRY-DPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL--DG-- 127 (668)
T ss_dssp CCEEETTEEEEEEGG--------GEEEEEETTTCCEEEEE-CCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT--TS--
T ss_pred CCEEECCEEEEECCC--------CeEEEEECCCChhceEE-CCCCCccccccccccCCccceEEECCEEEEEcC--CC--
Confidence 678899999987643 2799999755 45654 222111000000000001123445666665542 12
Q ss_pred EEEeeccCCCCcceEEEEEEeCC-Cc-ceeeEEEEecCCcEEEEec------CCEEEEEeCCCCcEE
Q 011826 353 DIWVMKDYGVQESWIKQLSVDNG-YF-GICRPIKYLDDGSLLLFCK------RRALVLYNPVEKNTR 411 (476)
Q Consensus 353 ~IWvl~~~~~~~~W~~~~~I~~~-~~-~~~~p~~~~~~g~il~~~~------~~~l~~ydl~t~~~~ 411 (476)
.|..++-...+..|+.... +.. .. ....|+ ..+|.|++... .+.++.+|.+|++..
T Consensus 128 ~l~alD~~tG~~~W~~~~~-~~~~~~~~~~~P~--v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~ 191 (668)
T 1kv9_A 128 RLIALDAKTGKAIWSQQTT-DPAKPYSITGAPR--VVKGKVIIGNGGAEYGVRGFVSAYDADTGKLA 191 (668)
T ss_dssp EEEEEETTTCCEEEEEECS-CTTSSCBCCSCCE--EETTEEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred EEEEEECCCCCEeeeeccC-CCCCcceecCCCE--EECCEEEEeCCCCCcCCCCEEEEEECCCCcEE
Confidence 3444442212456665321 100 01 112333 23455555433 368999999988754
No 134
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=29.74 E-value=3.2e+02 Score=24.84 Aligned_cols=29 Identities=17% Similarity=0.226 Sum_probs=22.4
Q ss_pred ceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCC
Q 011826 281 GVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAP 316 (476)
Q Consensus 281 G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP 316 (476)
|.+||.... ...|..+|..+.+...+..|
T Consensus 61 ~~l~~~d~~-------~~~i~~~d~~~~~~~~~~~~ 89 (326)
T 2ghs_A 61 GTAWWFNIL-------ERELHELHLASGRKTVHALP 89 (326)
T ss_dssp TEEEEEEGG-------GTEEEEEETTTTEEEEEECS
T ss_pred CEEEEEECC-------CCEEEEEECCCCcEEEEECC
Confidence 788998644 23899999999888777665
No 135
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=29.46 E-value=3.3e+02 Score=24.82 Aligned_cols=114 Identities=7% Similarity=0.021 Sum_probs=60.0
Q ss_pred EEecccceEEEeecCCCccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEE
Q 011826 175 IVNSCNGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYS 254 (476)
Q Consensus 175 ~~~s~~GLlcl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVys 254 (476)
.++..+|.|...+......+++.++-......+-... .....++.+|+..+ +++..... ...+++++
T Consensus 126 avdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~--------~~~P~gla~d~~~~--~lY~~D~~---~~~I~~~d 192 (316)
T 1ijq_A 126 VVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEN--------IQWPNGITLDLLSG--RLYWVDSK---LHSISSID 192 (316)
T ss_dssp EEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSS--------CSCEEEEEEETTTT--EEEEEETT---TTEEEEEE
T ss_pred EeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECC--------CCCceEEEEeccCC--EEEEEECC---CCeEEEEe
Confidence 3455688777766432256888887654443332211 12356778887543 33333221 35678888
Q ss_pred eCCCceEEccCC-CCCCccCccceEEcceEEEEEeeccCCCCCcceEEEEECCCce
Q 011826 255 LGGAAWRKVGNA-PWSPIAGLFPTYLNGVIHWVCDDIEDDQSCSDCIVGFDFEDER 309 (476)
Q Consensus 255 s~t~~Wr~~~~~-p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~Il~fD~~~e~ 309 (476)
.....=+.+... ...... ..-...+|.+||.... ...|..+|..+.+
T Consensus 193 ~dg~~~~~~~~~~~~~~~P-~giav~~~~ly~~d~~-------~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 193 VNGGNRKTILEDEKRLAHP-FSLAVFEDKVFWTDII-------NEAIFSANRLTGS 240 (316)
T ss_dssp TTSCSCEEEEECTTTTSSE-EEEEEETTEEEEEETT-------TTEEEEEETTTCC
T ss_pred cCCCceEEEeecCCccCCc-EEEEEECCEEEEEECC-------CCeEEEEeCCCCc
Confidence 764333333211 111110 1222357899997643 3489999975443
No 136
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=28.85 E-value=3.2e+02 Score=24.53 Aligned_cols=115 Identities=15% Similarity=0.035 Sum_probs=0.0
Q ss_pred cceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCcceeeEEeeCCeEEEEecCCCCCeEEEeecc
Q 011826 280 NGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMNLGVLGGCLSICDVTYFAPPDIWVMKD 359 (476)
Q Consensus 280 ~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~l~IWvl~~ 359 (476)
+|.+||.... ...|..||..++.-..+..+... ......-+|.|+++.. ......|++++.
T Consensus 42 ~g~lyv~d~~-------~~~I~~~d~~g~~~~~~~~~~~p-----------~gia~~~dG~l~vad~-~~~~~~v~~~d~ 102 (306)
T 2p4o_A 42 DGTIFVTNHE-------VGEIVSITPDGNQQIHATVEGKV-----------SGLAFTSNGDLVATGW-NADSIPVVSLVK 102 (306)
T ss_dssp TSCEEEEETT-------TTEEEEECTTCCEEEEEECSSEE-----------EEEEECTTSCEEEEEE-CTTSCEEEEEEC
T ss_pred CCCEEEEeCC-------CCeEEEECCCCceEEEEeCCCCc-----------eeEEEcCCCcEEEEec-cCCcceEEEEcC
Q ss_pred CCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEEec-CCEEEEEeCCCCcEEEEEEee
Q 011826 360 YGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLFCK-RRALVLYNPVEKNTRYLLIHE 417 (476)
Q Consensus 360 ~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~~~-~~~l~~ydl~t~~~~~v~i~g 417 (476)
.. ...+....+.. .....-+.++.++.+++... .+.++.+|+.+++.+.....+
T Consensus 103 ~~--g~~~~~~~~~~--~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~ 157 (306)
T 2p4o_A 103 SD--GTVETLLTLPD--AIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHP 157 (306)
T ss_dssp TT--SCEEEEEECTT--CSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECG
T ss_pred CC--CeEEEEEeCCC--ccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECC
No 137
>2jp2_A Spred-2, sprouty-related, EVH1 domain-containing protein 2; solution structure, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=28.52 E-value=93 Score=24.85 Aligned_cols=43 Identities=5% Similarity=-0.097 Sum_probs=26.5
Q ss_pred cEEEEcccccceeecCCCCCCCCcCccceeEEEEeE---eCCCCCeEEEEEEE
Q 011826 193 PCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGY---SFRSKQYKVLRLVF 242 (476)
Q Consensus 193 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~---d~~~~~yKVv~~~~ 242 (476)
.++++||.|+.|...-... ...+.+.+.+ |...+.|+|+....
T Consensus 21 ~Vm~~D~~~~~W~p~~~g~-------ls~v~v~~~~~~~d~~~~~yrI~~~~l 66 (126)
T 2jp2_A 21 VVMTRDDSSGGWFPQEGGG-------ISRVGVCKVMHPEGNGRSGFLIHGERQ 66 (126)
T ss_dssp EEEEECTTSSSSEECSCCS-------CEEEEEECCBCTTCSSCBCEEEEEEES
T ss_pred EEeeEcCCCCCEeeCCCCC-------cccEEEEEecCCCCCCCCEEEEEEEEc
Confidence 5889999999885433211 1122333334 55678999988764
No 138
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=27.93 E-value=3.7e+02 Score=24.92 Aligned_cols=204 Identities=8% Similarity=-0.017 Sum_probs=98.4
Q ss_pred cccceEEEeecCCCccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCC
Q 011826 178 SCNGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGG 257 (476)
Q Consensus 178 s~~GLlcl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t 257 (476)
+.+|-+++... .+..+.|||..+++........ ......+.++|.. . .+.....+ ..+.+|+..+
T Consensus 106 ~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~h--------~~~v~~~~~~~~~-~--~l~s~s~d---~~i~iwd~~~ 170 (420)
T 3vl1_A 106 KLQMRRFILGT-TEGDIKVLDSNFNLQREIDQAH--------VSEITKLKFFPSG-E--ALISSSQD---MQLKIWSVKD 170 (420)
T ss_dssp CSSSCEEEEEE-TTSCEEEECTTSCEEEEETTSS--------SSCEEEEEECTTS-S--EEEEEETT---SEEEEEETTT
T ss_pred ecCCCEEEEEE-CCCCEEEEeCCCcceeeecccc--------cCccEEEEECCCC-C--EEEEEeCC---CeEEEEeCCC
Confidence 34554333333 3467999999998876654322 1234667777743 2 23333332 4788998877
Q ss_pred Cce-EEccCCCCCCccCccceEE--cceEEEEEeeccCCCCCcceEEEEECCCceEEE-EcCCCCCCCCCC---cc----
Q 011826 258 AAW-RKVGNAPWSPIAGLFPTYL--NGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCV-IPAPPHFAEKPK---TR---- 326 (476)
Q Consensus 258 ~~W-r~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~-i~lP~~~~~~~~---~~---- 326 (476)
+.= +.+.... ... .++.+ +|.+...+.. ...|..+|+.+.+... +..+........ +.
T Consensus 171 ~~~~~~~~~h~-~~v---~~~~~~~~~~~l~s~~~-------d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 239 (420)
T 3vl1_A 171 GSNPRTLIGHR-ATV---TDIAIIDRGRNVLSASL-------DGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTD 239 (420)
T ss_dssp CCCCEEEECCS-SCE---EEEEEETTTTEEEEEET-------TSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCC
T ss_pred CcCceEEcCCC-CcE---EEEEEcCCCCEEEEEcC-------CCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCc
Confidence 631 1111100 000 12222 3443333322 2378899988765433 333221111000 00
Q ss_pred ------CCcceeeE-EeeCCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCc-EEEE-ecC
Q 011826 327 ------DNLYDMNL-GVLGGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGS-LLLF-CKR 397 (476)
Q Consensus 327 ------~~~~~~~L-~~~~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~-il~~-~~~ 397 (476)
.......+ ..-+|.+.++.. .+..+.||-+.... ....+.........-+.+..+|. +++. ..+
T Consensus 240 ~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~d 312 (420)
T 3vl1_A 240 RQLHEISTSKKNNLEFGTYGKYVIAGH-VSGVITVHNVFSKE------QTIQLPSKFTCSCNSLTVDGNNANYIYAGYEN 312 (420)
T ss_dssp SSCGGGCCCCCCTTCSSCTTEEEEEEE-TTSCEEEEETTTCC------EEEEECCTTSSCEEEEEECSSCTTEEEEEETT
T ss_pred ceeeecccCcccceEEcCCCCEEEEEc-CCCeEEEEECCCCc------eeEEcccccCCCceeEEEeCCCCCEEEEEeCC
Confidence 00000000 012454544443 46779999876432 22233222222234455667776 5555 456
Q ss_pred CEEEEEeCCCCc--EEEEE
Q 011826 398 RALVLYNPVEKN--TRYLL 414 (476)
Q Consensus 398 ~~l~~ydl~t~~--~~~v~ 414 (476)
+.+..||+++.+ +..+.
T Consensus 313 g~i~vwd~~~~~~~~~~~~ 331 (420)
T 3vl1_A 313 GMLAQWDLRSPECPVGEFL 331 (420)
T ss_dssp SEEEEEETTCTTSCSEEEE
T ss_pred CeEEEEEcCCCcCchhhhh
Confidence 899999999864 44444
No 139
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=26.84 E-value=3.6e+02 Score=24.48 Aligned_cols=202 Identities=8% Similarity=-0.053 Sum_probs=95.7
Q ss_pred ecccceEEEeecCCCccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeC
Q 011826 177 NSCNGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLG 256 (476)
Q Consensus 177 ~s~~GLlcl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~ 256 (476)
...+|.+.+... ....++++||.+++...++.+. ...++.+++. +. ++... . ..+.+|+..
T Consensus 57 ~~~~~~l~~~d~-~~~~i~~~d~~~~~~~~~~~~~----------~v~~i~~~~d-g~--l~v~~-~----~gl~~~d~~ 117 (326)
T 2ghs_A 57 DPASGTAWWFNI-LERELHELHLASGRKTVHALPF----------MGSALAKISD-SK--QLIAS-D----DGLFLRDTA 117 (326)
T ss_dssp ETTTTEEEEEEG-GGTEEEEEETTTTEEEEEECSS----------CEEEEEEEET-TE--EEEEE-T----TEEEEEETT
T ss_pred eCCCCEEEEEEC-CCCEEEEEECCCCcEEEEECCC----------cceEEEEeCC-Ce--EEEEE-C----CCEEEEECC
Confidence 334465555543 2357999999998876554311 2344556654 22 22222 2 247888888
Q ss_pred CCceEEccCCCC-CCccCccceEE--cceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCcceee
Q 011826 257 GAAWRKVGNAPW-SPIAGLFPTYL--NGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMN 333 (476)
Q Consensus 257 t~~Wr~~~~~p~-~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~~~ 333 (476)
++..+.+...+. ........+.+ +|.+| ++............|..+| +.++..+.- ... . .-.
T Consensus 118 ~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~-v~~~~~~~~~~~~~l~~~~--~g~~~~~~~--~~~-~--------~~~ 183 (326)
T 2ghs_A 118 TGVLTLHAELESDLPGNRSNDGRMHPSGALW-IGTMGRKAETGAGSIYHVA--KGKVTKLFA--DIS-I--------PNS 183 (326)
T ss_dssp TCCEEEEECSSTTCTTEEEEEEEECTTSCEE-EEEEETTCCTTCEEEEEEE--TTEEEEEEE--EES-S--------EEE
T ss_pred CCcEEEEeeCCCCCCCCCCCCEEECCCCCEE-EEeCCCcCCCCceEEEEEe--CCcEEEeeC--CCc-c--------cCC
Confidence 888876643221 11111122333 57764 4432100011223799999 456654421 100 0 111
Q ss_pred EEe-eCC-eEEEEecCCCCCeEEEeec-cCCCCcceE--EEE-EEeCCCcceeeEEEEecCCcEEEEec-CCEEEEEeCC
Q 011826 334 LGV-LGG-CLSICDVTYFAPPDIWVMK-DYGVQESWI--KQL-SVDNGYFGICRPIKYLDDGSLLLFCK-RRALVLYNPV 406 (476)
Q Consensus 334 L~~-~~G-~L~~~~~~~~~~l~IWvl~-~~~~~~~W~--~~~-~I~~~~~~~~~p~~~~~~g~il~~~~-~~~l~~ydl~ 406 (476)
+.. -+| .|+++.. ....+.+|-++ +.+. ... +.+ .++. ......-+.+..+|.+++... .+.|..||++
T Consensus 184 i~~s~dg~~lyv~~~-~~~~I~~~d~~~~~Gl--~~~~~~~~~~~~~-~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~ 259 (326)
T 2ghs_A 184 ICFSPDGTTGYFVDT-KVNRLMRVPLDARTGL--PTGKAEVFIDSTG-IKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD 259 (326)
T ss_dssp EEECTTSCEEEEEET-TTCEEEEEEBCTTTCC--BSSCCEEEEECTT-SSSEEEEEEECTTSCEEEEEETTTEEEEECTT
T ss_pred eEEcCCCCEEEEEEC-CCCEEEEEEcccccCC--cccCceEEEECCC-CCCCCCeeEECCCCCEEEEEeCCCEEEEECCC
Confidence 222 244 4666654 23444444443 1220 110 111 1111 011112234455678877653 5789999997
Q ss_pred CCcEEEEEE
Q 011826 407 EKNTRYLLI 415 (476)
Q Consensus 407 t~~~~~v~i 415 (476)
++.++.+..
T Consensus 260 g~~~~~i~~ 268 (326)
T 2ghs_A 260 GNHIARYEV 268 (326)
T ss_dssp CCEEEEEEC
T ss_pred CCEEEEEEC
Confidence 766666653
No 140
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=26.52 E-value=3.2e+02 Score=23.76 Aligned_cols=195 Identities=9% Similarity=0.030 Sum_probs=97.9
Q ss_pred ecccceEEEeecCCCccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeC
Q 011826 177 NSCNGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLG 256 (476)
Q Consensus 177 ~s~~GLlcl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~ 256 (476)
...+|.|.+.+.. ...+.++++.++....+-... .....++.+|+..+ +++..... ...+.+++..
T Consensus 44 d~~~~~ly~~d~~-~~~I~~~~~~g~~~~~~~~~~--------~~~p~~ia~d~~~~--~lyv~d~~---~~~I~~~~~~ 109 (267)
T 1npe_A 44 DCVDKVVYWTDIS-EPSIGRASLHGGEPTTIIRQD--------LGSPEGIALDHLGR--TIFWTDSQ---LDRIEVAKMD 109 (267)
T ss_dssp ETTTTEEEEEETT-TTEEEEEESSSCCCEEEECTT--------CCCEEEEEEETTTT--EEEEEETT---TTEEEEEETT
T ss_pred ecCCCEEEEEECC-CCEEEEEecCCCCcEEEEECC--------CCCccEEEEEecCC--eEEEEECC---CCEEEEEEcC
Confidence 4456777776642 457889998877544332211 12346677787543 23332221 2467777775
Q ss_pred CCceEEccCCCCCCccCccceEE---cceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCcceee
Q 011826 257 GAAWRKVGNAPWSPIAGLFPTYL---NGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMN 333 (476)
Q Consensus 257 t~~Wr~~~~~p~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~~~ 333 (476)
...-+.+.... .....++.+ +|.+||.... .....|..+++.......+... ... . ...
T Consensus 110 g~~~~~~~~~~---~~~P~~i~vd~~~g~lyv~~~~-----~~~~~I~~~~~dg~~~~~~~~~-~~~-~--------P~g 171 (267)
T 1npe_A 110 GTQRRVLFDTG---LVNPRGIVTDPVRGNLYWTDWN-----RDNPKIETSHMDGTNRRILAQD-NLG-L--------PNG 171 (267)
T ss_dssp SCSCEEEECSS---CSSEEEEEEETTTTEEEEEECC-----SSSCEEEEEETTSCCCEEEECT-TCS-C--------EEE
T ss_pred CCCEEEEEECC---CCCccEEEEeeCCCEEEEEECC-----CCCcEEEEEecCCCCcEEEEEC-CCC-C--------CcE
Confidence 44323222111 111134444 5889997642 1123788999876554443211 111 1 222
Q ss_pred EEe--eCCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEe-cCCcEEEEe-cCCEEEEEeCCCCc
Q 011826 334 LGV--LGGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYL-DDGSLLLFC-KRRALVLYNPVEKN 409 (476)
Q Consensus 334 L~~--~~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~-~~g~il~~~-~~~~l~~ydl~t~~ 409 (476)
++. -++.|++++. ... .|++.+-.+ . .....++. ...|.++. .++.+++.. ..+.+..+|+++++
T Consensus 172 ia~d~~~~~lyv~d~-~~~--~I~~~~~~g---~-~~~~~~~~----~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~ 240 (267)
T 1npe_A 172 LTFDAFSSQLCWVDA-GTH--RAECLNPAQ---P-GRRKVLEG----LQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISK 240 (267)
T ss_dssp EEEETTTTEEEEEET-TTT--EEEEEETTE---E-EEEEEEEC----CCSEEEEEEETTEEEEEETTTTEEEEEETTTTE
T ss_pred EEEcCCCCEEEEEEC-CCC--EEEEEecCC---C-ceEEEecC----CCCceEEEEeCCEEEEEECCCCeEEEEeCCCCC
Confidence 333 3568888876 223 455554322 1 11112221 12344443 344565554 34789999998776
Q ss_pred E-EEEE
Q 011826 410 T-RYLL 414 (476)
Q Consensus 410 ~-~~v~ 414 (476)
. +.+.
T Consensus 241 ~~~~i~ 246 (267)
T 1npe_A 241 EMDTFH 246 (267)
T ss_dssp EEEEEC
T ss_pred ceEEEc
Confidence 4 4444
No 141
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=26.37 E-value=4e+02 Score=24.83 Aligned_cols=176 Identities=10% Similarity=-0.020 Sum_probs=85.3
Q ss_pred CccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCc---cccEEEEEEeCCCceEEccCCC
Q 011826 191 RNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDF---LNRTAEIYSLGGAAWRKVGNAP 267 (476)
Q Consensus 191 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~---~~~~~eVyss~t~~Wr~~~~~p 267 (476)
+..+.+||+.+++.....+.. ....++.+++.. .+-++.-...+. ..-.+.+|+..++.-......+
T Consensus 233 ~~~i~~~d~~~~~~~~~~~~~---------~~~~~~~~~~~g-~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~ 302 (433)
T 3bws_A 233 SEDISVIDRKTKLEIRKTDKI---------GLPRGLLLSKDG-KELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPP 302 (433)
T ss_dssp TTEEEEEETTTTEEEEECCCC---------SEEEEEEECTTS-SEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEE
T ss_pred CCcEEEEECCCCcEEEEecCC---------CCceEEEEcCCC-CEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCC
Confidence 457999999988765443322 124566676643 332222222110 1246888998877432221111
Q ss_pred CCCccCccceEE--cce-EEEEEeeccCCCCCcceEEEEECCCceEE-EEcCCCCCCCCCCccCCcceeeEEee-CCe-E
Q 011826 268 WSPIAGLFPTYL--NGV-IHWVCDDIEDDQSCSDCIVGFDFEDERFC-VIPAPPHFAEKPKTRDNLYDMNLGVL-GGC-L 341 (476)
Q Consensus 268 ~~~~~~~~~v~~--~G~-lywl~~~~~~~~~~~~~Il~fD~~~e~f~-~i~lP~~~~~~~~~~~~~~~~~L~~~-~G~-L 341 (476)
. ....+.+ +|. +|..... ...|..+|+.+.+.. .++.... ...+... +|. |
T Consensus 303 ~----~~~~~~~~~~g~~l~~~~~~-------~~~v~v~d~~~~~~~~~~~~~~~------------~~~~~~s~dg~~l 359 (433)
T 3bws_A 303 G----NKRHIVSGNTENKIYVSDMC-------CSKIEVYDLKEKKVQKSIPVFDK------------PNTIALSPDGKYL 359 (433)
T ss_dssp E----CEEEEEECSSTTEEEEEETT-------TTEEEEEETTTTEEEEEEECSSS------------EEEEEECTTSSEE
T ss_pred C----CcceEEECCCCCEEEEEecC-------CCEEEEEECCCCcEEEEecCCCC------------CCeEEEcCCCCEE
Confidence 0 0012222 353 4443322 338999999876543 2332111 1122222 343 5
Q ss_pred EEEecCC-------------CCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEEe--cCCEEEEEeCC
Q 011826 342 SICDVTY-------------FAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLFC--KRRALVLYNPV 406 (476)
Q Consensus 342 ~~~~~~~-------------~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~~--~~~~l~~ydl~ 406 (476)
++..... +..+.+|-++. ......+... ....-+.+..+|+.++.. .++.+..||++
T Consensus 360 ~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~------~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 360 YVSCRGPNHPTEGYLKKGLVLGKVYVIDTTT------DTVKEFWEAG--NQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp EEEECCCCCTTTCTTSCCSSCCEEEEEETTT------TEEEEEEECS--SSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred EEEecCCCccccccccccccceEEEEEECCC------CcEEEEecCC--CCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 5544321 13577776543 2233344432 112345566777766543 36788888875
Q ss_pred C
Q 011826 407 E 407 (476)
Q Consensus 407 t 407 (476)
+
T Consensus 432 ~ 432 (433)
T 3bws_A 432 G 432 (433)
T ss_dssp T
T ss_pred C
Confidence 3
No 142
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=26.22 E-value=4.3e+02 Score=25.11 Aligned_cols=201 Identities=6% Similarity=-0.111 Sum_probs=91.8
Q ss_pred CccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCCCceEEccCCCCCC
Q 011826 191 RNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGGAAWRKVGNAPWSP 270 (476)
Q Consensus 191 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t~~Wr~~~~~p~~~ 270 (476)
+..+++|+..+++....+.... .........+.++|..+.-+.+.....+ ..+.+|+..++.-...-...+..
T Consensus 170 ~g~v~~~~~~~~~~~~~~~~~~----~~h~~~v~~~~~sp~~~~~~~l~s~~~d---~~i~vwd~~~~~~~~~~~~~h~~ 242 (450)
T 2vdu_B 170 FGDVYSIDINSIPEEKFTQEPI----LGHVSMLTDVHLIKDSDGHQFIITSDRD---EHIKISHYPQCFIVDKWLFGHKH 242 (450)
T ss_dssp TSEEEEEETTSCCCSSCCCCCS----EECSSCEEEEEEEECTTSCEEEEEEETT---SCEEEEEESCTTCEEEECCCCSS
T ss_pred CCcEEEEecCCcccccccceee----ecccCceEEEEEcCCCCCCcEEEEEcCC---CcEEEEECCCCceeeeeecCCCC
Confidence 4567888877665432111010 0011234556666642123344444433 46888988877543221101000
Q ss_pred ccCccceEE-cceEEEEEeeccCCCCCcceEEEEECCCceE-EEEcCCCCC----C----------CCCCccCCcceeeE
Q 011826 271 IAGLFPTYL-NGVIHWVCDDIEDDQSCSDCIVGFDFEDERF-CVIPAPPHF----A----------EKPKTRDNLYDMNL 334 (476)
Q Consensus 271 ~~~~~~v~~-~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f-~~i~lP~~~----~----------~~~~~~~~~~~~~L 334 (476)
...++.+ +|.+...+.. ...|..+|+.+.+. ..+..+... . .......+.....+
T Consensus 243 --~v~~~~~sd~~~l~s~~~-------d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i 313 (450)
T 2vdu_B 243 --FVSSICCGKDYLLLSAGG-------DDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKI 313 (450)
T ss_dssp --CEEEEEECSTTEEEEEES-------SSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEE
T ss_pred --ceEEEEECCCCEEEEEeC-------CCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEE
Confidence 0122222 5655444432 23899999988764 334432100 0 00000000001122
Q ss_pred Eee-CCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEEecCC----------EEEEE
Q 011826 335 GVL-GGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLFCKRR----------ALVLY 403 (476)
Q Consensus 335 ~~~-~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~~~~~----------~l~~y 403 (476)
.-. +|.+.++....+..+.||-+.+.. ...+.....+... ....-+.+.. +.+++..... .++.+
T Consensus 314 ~~~~~~~~l~~~~~~d~~i~iw~~~~~~-~~~l~~~~~~~~~--~~v~~~~~~~-~~~~v~~~~~~~~~~~~~~i~v~~~ 389 (450)
T 2vdu_B 314 IKSKNLPFVAFFVEATKCIIILEMSEKQ-KGDLALKQIITFP--YNVISLSAHN-DEFQVTLDNKESSGVQKNFAKFIEY 389 (450)
T ss_dssp EECSSSSEEEEEETTCSEEEEEEECSSS-TTCEEEEEEEECS--SCEEEEEEET-TEEEEEECCTTCCSSCCCSEEEEEE
T ss_pred EEeCCCCEEEEEECCCCeEEEEEeccCC-CCceeeccEeccC--CceEEEEecC-CcEEEEEecccCCCCCCcceEEEEE
Confidence 222 344444443346789999993221 2456666667653 2223344444 4555543221 67777
Q ss_pred eCCCCcEE
Q 011826 404 NPVEKNTR 411 (476)
Q Consensus 404 dl~t~~~~ 411 (476)
+.++++++
T Consensus 390 ~~~~~~~~ 397 (450)
T 2vdu_B 390 NLNENSFV 397 (450)
T ss_dssp ETTTTEEE
T ss_pred EcCCCeEE
Confidence 77777654
No 143
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=26.07 E-value=5.8e+02 Score=26.59 Aligned_cols=207 Identities=11% Similarity=0.035 Sum_probs=100.1
Q ss_pred EEecccceEEEeecCCCccEEEEcccccceeecCCCCCC-CCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEE
Q 011826 175 IVNSCNGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAE-DDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIY 253 (476)
Q Consensus 175 ~~~s~~GLlcl~~~~~~~~~~V~NP~T~~~~~LP~~~~~-~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVy 253 (476)
+..-.+|-|-+... ...+..++|.++.+..+...+.. ...........++..|... . +.+...+ ..+..|
T Consensus 318 i~~D~~g~lWigt~--~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g-~---lWigt~~---~Gl~~~ 388 (781)
T 3v9f_A 318 IFQDSFNNIWIGTW--GGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQG-K---LWIGTDG---GGINVF 388 (781)
T ss_dssp EEECSSCCEEEEEB--SSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTS-C---EEEEEBS---SCEEEE
T ss_pred EEEeCCCCEEEEec--CCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCC-C---EEEEeCC---CcEEEE
Confidence 33344565555442 34588899998887766532100 0000111234555555432 1 2232221 236667
Q ss_pred EeCCCceEEccCCCCCCccCccceEE--cceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCcce
Q 011826 254 SLGGAAWRKVGNAPWSPIAGLFPTYL--NGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYD 331 (476)
Q Consensus 254 ss~t~~Wr~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~ 331 (476)
+..++.++....+.........+++. +|. .|+... ...|..||..+++|..+..+ ..... ..
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lWigt~-------~~Gl~~~~~~~~~~~~~~~~-~~~~~-------~v 452 (781)
T 3v9f_A 389 ENGKRVAIYNKENRELLSNSVLCSLKDSEGN-LWFGTY-------LGNISYYNTRLKKFQIIELE-KNELL-------DV 452 (781)
T ss_dssp ETTEEEEECC-----CCCSBEEEEEECTTSC-EEEEET-------TEEEEEECSSSCEEEECCST-TTCCC-------CE
T ss_pred ECCCCeEEEccCCCCCCCcceEEEEECCCCC-EEEEec-------cCCEEEEcCCCCcEEEeccC-CCCCC-------eE
Confidence 77766665542111111111134444 344 455532 23899999999999887654 11111 12
Q ss_pred eeEEee-CCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCC--cceeeEEEEecCCcEEEEecCCEEEEEeCCCC
Q 011826 332 MNLGVL-GGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGY--FGICRPIKYLDDGSLLLFCKRRALVLYNPVEK 408 (476)
Q Consensus 332 ~~L~~~-~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~--~~~~~p~~~~~~g~il~~~~~~~l~~ydl~t~ 408 (476)
..+.+- +|.|.+... .. |+.++... ..|.......... .....-+....+|.|.+-..+..|+.||++++
T Consensus 453 ~~i~~d~~g~lwigt~---~G--l~~~~~~~--~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~ 525 (781)
T 3v9f_A 453 RVFYEDKNKKIWIGTH---AG--VFVIDLAS--KKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQ 525 (781)
T ss_dssp EEEEECTTSEEEEEET---TE--EEEEESSS--SSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCC
T ss_pred EEEEECCCCCEEEEEC---Cc--eEEEeCCC--CeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCC
Confidence 223332 467766653 22 33333221 3454432211000 11112233445678888776678999999988
Q ss_pred cEEEE
Q 011826 409 NTRYL 413 (476)
Q Consensus 409 ~~~~v 413 (476)
+++.+
T Consensus 526 ~~~~~ 530 (781)
T 3v9f_A 526 LVRKF 530 (781)
T ss_dssp EEEEE
T ss_pred eEEEc
Confidence 77665
No 144
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=25.96 E-value=4.2e+02 Score=24.96 Aligned_cols=109 Identities=11% Similarity=0.063 Sum_probs=54.3
Q ss_pred cceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCcceeeEEeeCCeEEEEecCCCCCeEEEeecc
Q 011826 280 NGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMNLGVLGGCLSICDVTYFAPPDIWVMKD 359 (476)
Q Consensus 280 ~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~l~IWvl~~ 359 (476)
+|.|||.... ...|..+|+.+.....+-... .... ..+.+...+|.|++++.. .. .|++.+-
T Consensus 127 ~~~ly~~D~~-------~~~I~r~~~~g~~~~~~~~~~-~~~p-------~glavd~~~g~lY~~d~~-~~--~I~~~~~ 188 (386)
T 3v65_B 127 RELVFWSDVT-------LDRILRANLNGSNVEEVVSTG-LESP-------GGLAVDWVHDKLYWTDSG-TS--RIEVANL 188 (386)
T ss_dssp TTEEEEEETT-------TTEEEEEETTSCCEEEEECSS-CSCC-------CCEEEETTTTEEEEEETT-TT--EEEECBT
T ss_pred CCeEEEEeCC-------CCcEEEEecCCCCcEEEEeCC-CCCc-------cEEEEEeCCCeEEEEcCC-CC--eEEEEeC
Confidence 4889998643 338999999877655442211 1110 022222246888888762 23 5555553
Q ss_pred CCCCcceEEEEEEeCCCcceeeEEE--Eec-CCcEEEEec-C-CEEEEEeCCCCcEEEE
Q 011826 360 YGVQESWIKQLSVDNGYFGICRPIK--YLD-DGSLLLFCK-R-RALVLYNPVEKNTRYL 413 (476)
Q Consensus 360 ~~~~~~W~~~~~I~~~~~~~~~p~~--~~~-~g~il~~~~-~-~~l~~ydl~t~~~~~v 413 (476)
.+. . ... .+.. .+..|.+ +.. +|.+++... . ..+..+++++...+.+
T Consensus 189 dg~-~--~~~-l~~~---~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~ 240 (386)
T 3v65_B 189 DGA-H--RKV-LLWQ---SLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRII 240 (386)
T ss_dssp TSC-S--CEE-EECS---SCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEE
T ss_pred CCC-c--eEE-eecC---CCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEE
Confidence 331 1 111 1211 1223433 332 334444432 2 5788888876654443
No 145
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=24.51 E-value=3.9e+02 Score=24.10 Aligned_cols=160 Identities=8% Similarity=-0.030 Sum_probs=88.5
Q ss_pred eEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCCCce-EEccCCCCCCccCccceEEcceEEEEEeeccCCCCCcceE
Q 011826 222 VISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGGAAW-RKVGNAPWSPIAGLFPTYLNGVIHWVCDDIEDDQSCSDCI 300 (476)
Q Consensus 222 ~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t~~W-r~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~I 300 (476)
..-|+.|+. . .++.-.. .++...+.+++..+++= +.+..++ ..+. ..-...++.+|-+... ...+
T Consensus 44 ftqGL~~~~---~-~LyestG-~~g~S~v~~vD~~Tgkv~~~~~l~~-~~Fg-eGit~~g~~ly~ltw~-------~~~v 109 (262)
T 3nol_A 44 FTEGFFYRN---G-YFYESTG-LNGRSSIRKVDIESGKTLQQIELGK-RYFG-EGISDWKDKIVGLTWK-------NGLG 109 (262)
T ss_dssp EEEEEEEET---T-EEEEEEE-ETTEEEEEEECTTTCCEEEEEECCT-TCCE-EEEEEETTEEEEEESS-------SSEE
T ss_pred ccceEEEEC---C-EEEEECC-CCCCceEEEEECCCCcEEEEEecCC-ccce-eEEEEeCCEEEEEEee-------CCEE
Confidence 456777773 2 3333322 22345788999999853 3333322 1111 0224456788877643 3389
Q ss_pred EEEECCCce-EEEEcCCCCCCCCCCccCCcceeeEEeeCCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCC--c
Q 011826 301 VGFDFEDER-FCVIPAPPHFAEKPKTRDNLYDMNLGVLGGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGY--F 377 (476)
Q Consensus 301 l~fD~~~e~-f~~i~lP~~~~~~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~--~ 377 (476)
..||..+.+ -..++.|. . ...|..-++.|++.+. .=.||+++-.. =....+|.... .
T Consensus 110 ~v~D~~t~~~~~ti~~~~--e----------G~glt~dg~~L~~SdG----s~~i~~iDp~T----~~v~~~I~V~~~g~ 169 (262)
T 3nol_A 110 FVWNIRNLRQVRSFNYDG--E----------GWGLTHNDQYLIMSDG----TPVLRFLDPES----LTPVRTITVTAHGE 169 (262)
T ss_dssp EEEETTTCCEEEEEECSS--C----------CCCEEECSSCEEECCS----SSEEEEECTTT----CSEEEEEECEETTE
T ss_pred EEEECccCcEEEEEECCC--C----------ceEEecCCCEEEEECC----CCeEEEEcCCC----CeEEEEEEeccCCc
Confidence 999998754 45677764 1 1224444566777653 23588886432 23344555521 1
Q ss_pred --ceeeEEEEecCCcEEEEe-cCCEEEEEeCCCCcEE-EEEEe
Q 011826 378 --GICRPIKYLDDGSLLLFC-KRRALVLYNPVEKNTR-YLLIH 416 (476)
Q Consensus 378 --~~~~p~~~~~~g~il~~~-~~~~l~~ydl~t~~~~-~v~i~ 416 (476)
....-+. +.+|+|+... ..+.+...|++|+++. .+...
T Consensus 170 ~~~~lNELe-~~~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~ 211 (262)
T 3nol_A 170 ELPELNELE-WVDGEIFANVWQTNKIVRIDPETGKVTGIIDLN 211 (262)
T ss_dssp ECCCEEEEE-EETTEEEEEETTSSEEEEECTTTCBEEEEEECT
T ss_pred cccccceeE-EECCEEEEEEccCCeEEEEECCCCcEEEEEECC
Confidence 1111133 3367877655 4578999999999874 45554
No 146
>1xod_A Spred1; sprouty, EVH1, peptide-binding, signaling protein; 1.15A {Xenopus tropicalis} SCOP: b.55.1.4 PDB: 1tj6_A
Probab=23.94 E-value=86 Score=24.71 Aligned_cols=43 Identities=9% Similarity=0.099 Sum_probs=22.0
Q ss_pred cEEEEcccccceeecCCCCCCCCcCccceeEEEEeE---eCCCCCeEEEEEEE
Q 011826 193 PCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGY---SFRSKQYKVLRLVF 242 (476)
Q Consensus 193 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~---d~~~~~yKVv~~~~ 242 (476)
.+.++||.|+.|...-... ...+.+.+.. |...+.|+|+....
T Consensus 12 ~V~~~d~~~~~W~p~~~g~-------ls~v~i~~~~~~~d~~~~~yrIv~~~l 57 (118)
T 1xod_A 12 VVMTRDDSSGGWLQLGGGG-------LSSVTVSKTLQPGDSGGTEFLVHGERL 57 (118)
T ss_dssp EEEEECSSSSCEEEGGGCC-------CEEEEEECC---------CCEEEEEET
T ss_pred EEeeEcCCCCCEeeCCCCC-------cccEEEEEecCcCCCCCCEEEEEEEEC
Confidence 4888999999885433211 1112222333 55678899987753
No 147
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4
Probab=23.69 E-value=1.2e+02 Score=25.46 Aligned_cols=39 Identities=21% Similarity=0.386 Sum_probs=27.9
Q ss_pred cEEEEccccc-ceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEE
Q 011826 193 PCIICNPITG-EYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLV 241 (476)
Q Consensus 193 ~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~ 241 (476)
.+++.||.|+ .|+ |.... ...+.+.+|...+.|+|+.+.
T Consensus 17 ~Vm~~D~~tk~~Wv--P~g~~--------~~~V~i~~d~~rnsyRIvg~~ 56 (168)
T 1i2h_A 17 HVFQIDPNTKKNWV--PTSKH--------AVTVSYFYDSTRNVYRIISLD 56 (168)
T ss_dssp EEEEECTTSSCCSE--ESCSS--------CEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEECCCCCCcee--ecCCC--------CeEEEEEEcCCCCEEEEEEcc
Confidence 5889999997 774 43221 135566789988899999865
No 148
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=23.43 E-value=4.1e+02 Score=23.98 Aligned_cols=96 Identities=10% Similarity=0.012 Sum_probs=53.5
Q ss_pred eEEEEECCCceEEEEcCCCCCCCCCCccCCcceeeEE-eeCCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCCc
Q 011826 299 CIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMNLG-VLGGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYF 377 (476)
Q Consensus 299 ~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~~~L~-~~~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~ 377 (476)
.|..+|+.+.+...+........ ...+. .-+|.+.++.. .+..+.||-+...... ...+...+.
T Consensus 150 ~i~~wd~~~~~~~~~~~~~~~~~---------i~~~~~~pdg~~lasg~-~dg~i~iwd~~~~~~~-----~~~~~~~h~ 214 (343)
T 3lrv_A 150 TIGFQSYEDDSQYIVHSAKSDVE---------YSSGVLHKDSLLLALYS-PDGILDVYNLSSPDQA-----SSRFPVDEE 214 (343)
T ss_dssp CEEEEESSSSCEEEEECCCSSCC---------CCEEEECTTSCEEEEEC-TTSCEEEEESSCTTSC-----CEECCCCTT
T ss_pred cEEEEECCCCcEEEEEecCCCCc---------eEEEEECCCCCEEEEEc-CCCEEEEEECCCCCCC-----ccEEeccCC
Confidence 78999998877644322211110 11121 12455544433 5788999988754311 012222122
Q ss_pred ceeeEEEEecCCcEEEEecCCEEEEEeCCCCc
Q 011826 378 GICRPIKYLDDGSLLLFCKRRALVLYNPVEKN 409 (476)
Q Consensus 378 ~~~~p~~~~~~g~il~~~~~~~l~~ydl~t~~ 409 (476)
....-+.+..+|..++...++.+..||+++.+
T Consensus 215 ~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~ 246 (343)
T 3lrv_A 215 AKIKEVKFADNGYWMVVECDQTVVCFDLRKDV 246 (343)
T ss_dssp SCEEEEEECTTSSEEEEEESSBEEEEETTSST
T ss_pred CCEEEEEEeCCCCEEEEEeCCeEEEEEcCCCC
Confidence 23344566778887776656699999998765
No 149
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=23.06 E-value=4.4e+02 Score=24.13 Aligned_cols=22 Identities=23% Similarity=0.493 Sum_probs=16.2
Q ss_pred cceEEEEEeeccCCCCCcceEEEEECCCc
Q 011826 280 NGVIHWVCDDIEDDQSCSDCIVGFDFEDE 308 (476)
Q Consensus 280 ~G~lywl~~~~~~~~~~~~~Il~fD~~~e 308 (476)
+|.+||.-.. ...|..+|+.+.
T Consensus 46 ~~~lyw~D~~-------~~~I~r~~~~g~ 67 (318)
T 3sov_A 46 HGLIYWSDVS-------EEAIKRTEFNKT 67 (318)
T ss_dssp GTEEEEEETT-------TTEEEEEETTSS
T ss_pred CCEEEEEECC-------CCcEEEEEccCC
Confidence 4889998643 338999998765
No 150
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=22.46 E-value=4.7e+02 Score=24.22 Aligned_cols=71 Identities=14% Similarity=0.243 Sum_probs=46.2
Q ss_pred CCeEEEEec-C------CCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEEecCCEEEEEeCCCCcE
Q 011826 338 GGCLSICDV-T------YFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLFCKRRALVLYNPVEKNT 410 (476)
Q Consensus 338 ~G~L~~~~~-~------~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~~~~~~l~~ydl~t~~~ 410 (476)
++.|++... . .+..-.||+.+- .+...+.+|+.+. ..-+.+..+|+.++..+.+.+..||++++++
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~----~t~~~v~~i~~~~---p~~ia~spdg~~l~v~n~~~v~v~D~~t~~l 337 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDT----KTKQRVARIPGRD---ALSMTIDQQRNLMLTLDGGNVNVYDISQPEP 337 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEET----TTTEEEEEEECTT---CCEEEEETTTTEEEEECSSCEEEEECSSSSC
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEEC----CCCcEEEEEecCC---eeEEEECCCCCEEEEeCCCeEEEEECCCCcc
Confidence 367776643 1 112357777763 3456677787753 3445677888877766568899999999866
Q ss_pred EEEEE
Q 011826 411 RYLLI 415 (476)
Q Consensus 411 ~~v~i 415 (476)
+.+..
T Consensus 338 ~~~~~ 342 (361)
T 2oiz_A 338 KLLRT 342 (361)
T ss_dssp EEEEE
T ss_pred eeeEE
Confidence 66653
No 151
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=22.45 E-value=4.9e+02 Score=24.47 Aligned_cols=138 Identities=8% Similarity=0.060 Sum_probs=62.8
Q ss_pred cEEEEEEeCCCceEEccCCCCCCccCccceEEcceEEEEEeeccCCCCCcceEEEEECCCceEEE-EcCCCCCCCCCCcc
Q 011826 248 RTAEIYSLGGAAWRKVGNAPWSPIAGLFPTYLNGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCV-IPAPPHFAEKPKTR 326 (476)
Q Consensus 248 ~~~eVyss~t~~Wr~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~-i~lP~~~~~~~~~~ 326 (476)
..+.+|+..++.-...-..... ....+..+|.+...+.. ...|..+|+.+.+... +.... .
T Consensus 276 g~i~vwd~~~~~~~~~~~~~~~---~v~~~~~~~~~l~~g~~-------dg~i~iwd~~~~~~~~~~~~h~--~------ 337 (435)
T 1p22_A 276 RTIKVWNTSTCEFVRTLNGHKR---GIACLQYRDRLVVSGSS-------DNTIRLWDIECGACLRVLEGHE--E------ 337 (435)
T ss_dssp SEEEEEETTTCCEEEEEECCSS---CEEEEEEETTEEEEEET-------TSCEEEEETTTCCEEEEECCCS--S------
T ss_pred CeEEEEECCcCcEEEEEcCCCC---cEEEEEeCCCEEEEEeC-------CCeEEEEECCCCCEEEEEeCCc--C------
Confidence 4688888877642211111100 11344456654444432 2379999998765432 22111 0
Q ss_pred CCcceeeEEeeCCeEEEEecCCCCCeEEEeeccCCC---CcceEEEEEEeCCCcceeeEEEEecCCcEEEE-ecCCEEEE
Q 011826 327 DNLYDMNLGVLGGCLSICDVTYFAPPDIWVMKDYGV---QESWIKQLSVDNGYFGICRPIKYLDDGSLLLF-CKRRALVL 402 (476)
Q Consensus 327 ~~~~~~~L~~~~G~L~~~~~~~~~~l~IWvl~~~~~---~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~-~~~~~l~~ 402 (476)
.+.-...+|...++.. .+..+.||-+..... .........+... .....-+.+ ++..++. ..++.+..
T Consensus 338 ----~v~~~~~~~~~l~sg~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h-~~~v~~l~~--~~~~l~s~s~Dg~i~i 409 (435)
T 1p22_A 338 ----LVRCIRFDNKRIVSGA-YDGKIKVWDLVAALDPRAPAGTLCLRTLVEH-SGRVFRLQF--DEFQIVSSSHDDTILI 409 (435)
T ss_dssp ----CEEEEECCSSEEEEEE-TTSCEEEEEHHHHTSTTSCTTTTEEEEECCC-SSCCCCEEE--CSSCEEECCSSSEEEE
T ss_pred ----cEEEEEecCCEEEEEe-CCCcEEEEECCCCCCccccccchheeeccCC-CCCeEEEEe--CCCEEEEEeCCCEEEE
Confidence 2222233565544444 578899998864321 1112223333221 111111222 5554444 45788999
Q ss_pred EeCCCCcEE
Q 011826 403 YNPVEKNTR 411 (476)
Q Consensus 403 ydl~t~~~~ 411 (476)
||+.++...
T Consensus 410 wd~~~~~~~ 418 (435)
T 1p22_A 410 WDFLNDPAA 418 (435)
T ss_dssp EC-------
T ss_pred EECCCCCCc
Confidence 999876543
No 152
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=22.09 E-value=4.6e+02 Score=24.03 Aligned_cols=190 Identities=4% Similarity=-0.146 Sum_probs=87.9
Q ss_pred ecccceEEEeecCCCccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeC
Q 011826 177 NSCNGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLG 256 (476)
Q Consensus 177 ~s~~GLlcl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~ 256 (476)
-+.+|-.++... .+..+.|||..+++....-.... .....+.+.+..+.+ ++....+ -.+.+|+.+
T Consensus 147 ~spdg~~l~sgs-~dg~v~iwd~~~~~~~~~~~~h~--------~~v~~v~~s~~~~~~-~~s~~~d----g~v~~wd~~ 212 (357)
T 4g56_B 147 VFSDGTQAVSGG-KDFSVKVWDLSQKAVLKSYNAHS--------SEVNCVAACPGKDTI-FLSCGED----GRILLWDTR 212 (357)
T ss_dssp ECSSSSEEEEEE-TTSCEEEEETTTTEEEEEECCCS--------SCEEEEEECTTCSSC-EEEEETT----SCEEECCTT
T ss_pred ECCCCCEEEEEe-CCCeEEEEECCCCcEEEEEcCCC--------CCEEEEEEccCCCce-eeeeccC----CceEEEECC
Confidence 344665555443 34679999999988654332211 123445555543333 2222222 357888877
Q ss_pred CCceEEccCCCCCCccCccceEE---cceEEEEEeeccCCCCCcceEEEEECCCceEE-EEcCCCCCCCCCCccCCccee
Q 011826 257 GAAWRKVGNAPWSPIAGLFPTYL---NGVIHWVCDDIEDDQSCSDCIVGFDFEDERFC-VIPAPPHFAEKPKTRDNLYDM 332 (476)
Q Consensus 257 t~~Wr~~~~~p~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~-~i~lP~~~~~~~~~~~~~~~~ 332 (476)
++.-.......... ....++.+ ++.+...... ...|..+|+.+.+.. .+..... . ..
T Consensus 213 ~~~~~~~~~~~~~~-~~v~~v~~sp~~~~~la~g~~-------d~~i~~wd~~~~~~~~~~~~~~~----------~-v~ 273 (357)
T 4g56_B 213 KPKPATRIDFCASD-TIPTSVTWHPEKDDTFACGDE-------TGNVSLVNIKNPDSAQTSAVHSQ----------N-IT 273 (357)
T ss_dssp SSSCBCBCCCTTCC-SCEEEEEECTTSTTEEEEEES-------SSCEEEEESSCGGGCEEECCCSS----------C-EE
T ss_pred CCceeeeeeecccc-ccccchhhhhcccceEEEeec-------ccceeEEECCCCcEeEEEeccce----------e-EE
Confidence 66422111100000 00022322 2333222221 226888998875532 2222111 0 11
Q ss_pred eEEee-CC-eEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEec-CCcEEEE-ecCCEEEEEeCCCC
Q 011826 333 NLGVL-GG-CLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLD-DGSLLLF-CKRRALVLYNPVEK 408 (476)
Q Consensus 333 ~L~~~-~G-~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~-~g~il~~-~~~~~l~~ydl~t~ 408 (476)
.+.-. +| .+.+... .+..+.||-++.. .....+.. .....-+.+.. ++.+|+. ..++.+..||+.++
T Consensus 274 ~l~~sp~~~~~lasgs-~D~~i~iwd~~~~------~~~~~~~H--~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 274 GLAYSYHSSPFLASIS-EDCTVAVLDADFS------EVFRDLSH--RDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp EEEECSSSSCCEEEEE-TTSCEEEECTTSC------EEEEECCC--SSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred EEEEcCCCCCEEEEEe-CCCEEEEEECCCC------cEeEECCC--CCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 22221 33 3333333 5678999966431 12222222 22223345553 6666654 45788999998654
No 153
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=22.05 E-value=4.5e+02 Score=23.86 Aligned_cols=68 Identities=9% Similarity=-0.059 Sum_probs=36.2
Q ss_pred CCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEEecCCEEEEEeCCCCc
Q 011826 338 GGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLFCKRRALVLYNPVEKN 409 (476)
Q Consensus 338 ~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~~~~~~l~~ydl~t~~ 409 (476)
+|.+.++.. .+..+.||-+.... ........+... .....-+.+..+|.+++...++.++.|+.....
T Consensus 216 ~~~~l~~~~-~d~~i~iwd~~~~~--~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~~~~ 283 (377)
T 3dwl_C 216 SGNALAYAG-HDSSVTIAYPSAPE--QPPRALITVKLS-QLPLRSLLWANESAIVAAGYNYSPILLQGNESG 283 (377)
T ss_dssp TSSCEEEEE-TTTEEC-CEECSTT--SCEEECCCEECS-SSCEEEEEEEETTEEEEEESSSSEEEECCCC--
T ss_pred CCCEEEEEe-CCCcEEEEECCCCC--CcceeeEeecCC-CCceEEEEEcCCCCEEEEEcCCcEEEEEeCCCc
Confidence 344333333 46789999987643 222222222221 122234556778888877777777788877443
No 154
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=21.93 E-value=6.6e+02 Score=25.82 Aligned_cols=218 Identities=10% Similarity=-0.036 Sum_probs=0.0
Q ss_pred EEecccceEEEeecCCCccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEE
Q 011826 175 IVNSCNGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYS 254 (476)
Q Consensus 175 ~~~s~~GLlcl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVys 254 (476)
+.-+-+|-.++... .++.+.|||..|++...--... .....++.++| +-+.+.+...+ ..+.||+
T Consensus 19 i~~sp~~~~la~~~-~~g~v~iwd~~~~~~~~~~~~~--------~~~v~~~~~s~---~~~~l~~~~~d---g~i~vw~ 83 (814)
T 3mkq_A 19 IDFHPTEPWVLTTL-YSGRVEIWNYETQVEVRSIQVT--------ETPVRAGKFIA---RKNWIIVGSDD---FRIRVFN 83 (814)
T ss_dssp EEECSSSSEEEEEE-TTSEEEEEETTTTEEEEEEECC--------SSCEEEEEEEG---GGTEEEEEETT---SEEEEEE
T ss_pred EEECCCCCEEEEEe-CCCEEEEEECCCCceEEEEecC--------CCcEEEEEEeC---CCCEEEEEeCC---CeEEEEE
Q ss_pred eCCCceEEccCCCCCCccCccceEEcceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCcceeeE
Q 011826 255 LGGAAWRKVGNAPWSPIAGLFPTYLNGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMNL 334 (476)
Q Consensus 255 s~t~~Wr~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~~~L 334 (476)
..++.....-......... -...-+|.....+.. ...|..+|+.+..-....+....... .....
T Consensus 84 ~~~~~~~~~~~~~~~~v~~-~~~s~~~~~l~~~~~-------dg~i~vw~~~~~~~~~~~~~~~~~~v-------~~~~~ 148 (814)
T 3mkq_A 84 YNTGEKVVDFEAHPDYIRS-IAVHPTKPYVLSGSD-------DLTVKLWNWENNWALEQTFEGHEHFV-------MCVAF 148 (814)
T ss_dssp TTTCCEEEEEECCSSCEEE-EEECSSSSEEEEEET-------TSEEEEEEGGGTSEEEEEEECCSSCE-------EEEEE
T ss_pred CCCCcEEEEEecCCCCEEE-EEEeCCCCEEEEEcC-------CCEEEEEECCCCceEEEEEcCCCCcE-------EEEEE
Q ss_pred EeeCCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEec--CC-cEEEEecCCEEEEEeCCCCcEE
Q 011826 335 GVLGGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLD--DG-SLLLFCKRRALVLYNPVEKNTR 411 (476)
Q Consensus 335 ~~~~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~--~g-~il~~~~~~~l~~ydl~t~~~~ 411 (476)
...+|.+.++.. .+..+.+|-+..... ...+.........-+.+.. +| .++....++.+..||+++++..
T Consensus 149 ~p~~~~~l~~~~-~dg~v~vwd~~~~~~------~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~ 221 (814)
T 3mkq_A 149 NPKDPSTFASGC-LDRTVKVWSLGQSTP------NFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCV 221 (814)
T ss_dssp ETTEEEEEEEEE-TTSEEEEEETTCSSC------SEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEE
T ss_pred EcCCCCEEEEEe-CCCeEEEEECCCCcc------eeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEE
Q ss_pred EEEEeeCCCCeEEEEEecCC
Q 011826 412 YLLIHEDQSMIFEAITHVPS 431 (476)
Q Consensus 412 ~v~i~g~~~~~~~~~~Y~~S 431 (476)
..-...... ...+.+-|.
T Consensus 222 ~~~~~~~~~--v~~~~~~~~ 239 (814)
T 3mkq_A 222 ATLEGHMSN--VSFAVFHPT 239 (814)
T ss_dssp EEEECCSSC--EEEEEECSS
T ss_pred EEEcCCCCC--EEEEEEcCC
No 155
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=21.59 E-value=6.4e+02 Score=25.52 Aligned_cols=152 Identities=11% Similarity=-0.001 Sum_probs=73.0
Q ss_pred ccEEEEEEeCCCceEEccCCCCCCccCccceE--Ecce-EEEEEeeccCCCCCcceEEEEECCCc-eEEEEcCCCCC-CC
Q 011826 247 NRTAEIYSLGGAAWRKVGNAPWSPIAGLFPTY--LNGV-IHWVCDDIEDDQSCSDCIVGFDFEDE-RFCVIPAPPHF-AE 321 (476)
Q Consensus 247 ~~~~eVyss~t~~Wr~~~~~p~~~~~~~~~v~--~~G~-lywl~~~~~~~~~~~~~Il~fD~~~e-~f~~i~lP~~~-~~ 321 (476)
...+.+++..++.-+.+........ ....+. -+|. ++....+ .......|..+|+.+. ....+.-.... ..
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~~~~~-~~~~~~~spdg~~l~~~~~~---~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~ 309 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGEPKEK-FLTNLSWSPDENILYVAEVN---RAQNECKVNAYDAETGRFVRTLFVETDKHYV 309 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCSCTTC-EEEEEEECTTSSEEEEEEEC---TTSCEEEEEEEETTTCCEEEEEEEEECSSCC
T ss_pred eeEEEEEECCCCceEeeccCCCCce-eEeeEEEECCCCEEEEEEeC---CCCCeeEEEEEECCCCceeeEEEEccCCCeE
Confidence 3568888888887655542210000 001222 2565 4443332 1122347999999887 66555321110 00
Q ss_pred CCCccCCcceeeEEe-eCCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCc-EEEEecC--
Q 011826 322 KPKTRDNLYDMNLGV-LGGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGS-LLLFCKR-- 397 (476)
Q Consensus 322 ~~~~~~~~~~~~L~~-~~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~-il~~~~~-- 397 (476)
.. ...+.... .+|++.++.. .+....||.++..+ .. ...+..+.......+.+..+|+ |++....
T Consensus 310 ~~-----~~~~~~sp~~dg~~l~~~~-~~g~~~l~~~~~~~--~~---~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~ 378 (706)
T 2z3z_A 310 EP-----LHPLTFLPGSNNQFIWQSR-RDGWNHLYLYDTTG--RL---IRQVTKGEWEVTNFAGFDPKGTRLYFESTEAS 378 (706)
T ss_dssp CC-----CSCCEECTTCSSEEEEEEC-TTSSCEEEEEETTS--CE---EEECCCSSSCEEEEEEECTTSSEEEEEESSSC
T ss_pred Cc-----cCCceeecCCCCEEEEEEc-cCCccEEEEEECCC--CE---EEecCCCCeEEEeeeEEcCCCCEEEEEecCCC
Confidence 00 00111111 1566544433 45679999987333 21 2233322222323355667775 4444432
Q ss_pred ---CEEEEEeCCCCcEEEE
Q 011826 398 ---RALVLYNPVEKNTRYL 413 (476)
Q Consensus 398 ---~~l~~ydl~t~~~~~v 413 (476)
..++.+|+++++.+.+
T Consensus 379 ~~~~~l~~~d~~~~~~~~l 397 (706)
T 2z3z_A 379 PLERHFYCIDIKGGKTKDL 397 (706)
T ss_dssp TTCBEEEEEETTCCCCEES
T ss_pred CceEEEEEEEcCCCCceec
Confidence 3788889888765544
No 156
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=21.57 E-value=4.6e+02 Score=23.80 Aligned_cols=200 Identities=8% Similarity=0.073 Sum_probs=0.0
Q ss_pred eEEEecccceEEEeecCCCccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEE
Q 011826 173 YDIVNSCNGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEI 252 (476)
Q Consensus 173 ~~~~~s~~GLlcl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eV 252 (476)
+.+.-+-+|-+++... .+..+.|||..++++........ ........+.+.|..+ .+.....+ ..+.+
T Consensus 20 ~~l~~sp~g~~las~~-~D~~i~iw~~~~~~~~~~~~~~~-----~h~~~v~~~~~sp~g~---~l~s~s~D---~~v~i 87 (345)
T 3fm0_A 20 WFLAWNPAGTLLASCG-GDRRIRIWGTEGDSWICKSVLSE-----GHQRTVRKVAWSPCGN---YLASASFD---ATTCI 87 (345)
T ss_dssp EEEEECTTSSCEEEEE-TTSCEEEEEEETTEEEEEEEECS-----SCSSCEEEEEECTTSS---EEEEEETT---SCEEE
T ss_pred EEEEECCCCCEEEEEc-CCCeEEEEEcCCCcceeeeeecc-----ccCCcEEEEEECCCCC---EEEEEECC---CcEEE
Q ss_pred EEeCCCceEEccCCCCCCccCc-cceEEcceEEEEEeeccCCCCCcceEEEEECCC-ceEEEEcCCCCCCCCCCccCCcc
Q 011826 253 YSLGGAAWRKVGNAPWSPIAGL-FPTYLNGVIHWVCDDIEDDQSCSDCIVGFDFED-ERFCVIPAPPHFAEKPKTRDNLY 330 (476)
Q Consensus 253 yss~t~~Wr~~~~~p~~~~~~~-~~v~~~G~lywl~~~~~~~~~~~~~Il~fD~~~-e~f~~i~lP~~~~~~~~~~~~~~ 330 (476)
++..++.++.+.........-. -...-+|.+...+.. ...|..+|+.+ +....+..-......
T Consensus 88 w~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~-------D~~v~iwd~~~~~~~~~~~~~~~h~~~-------- 152 (345)
T 3fm0_A 88 WKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSR-------DKSVWVWEVDEEDEYECVSVLNSHTQD-------- 152 (345)
T ss_dssp EEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEET-------TSCEEEEEECTTSCEEEEEEECCCCSC--------
T ss_pred EEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEEC-------CCeEEEEECCCCCCeEEEEEecCcCCC--------
Q ss_pred eeeEEeeCCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEEE-ecCCEEEEEe
Q 011826 331 DMNLGVLGGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLLF-CKRRALVLYN 404 (476)
Q Consensus 331 ~~~L~~~~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~~-~~~~~l~~yd 404 (476)
...+.-..+.-.++....+..+.||-++ ...|....++......+ .-+.+..+|..|+. ..++.+..||
T Consensus 153 v~~~~~~p~~~~l~s~s~d~~i~~w~~~----~~~~~~~~~~~~h~~~v-~~l~~sp~g~~l~s~s~D~~v~iW~ 222 (345)
T 3fm0_A 153 VKHVVWHPSQELLASASYDDTVKLYREE----EDDWVCCATLEGHESTV-WSLAFDPSGQRLASCSDDRTVRIWR 222 (345)
T ss_dssp EEEEEECSSSSCEEEEETTSCEEEEEEE----TTEEEEEEEECCCSSCE-EEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eEEEEECCCCCEEEEEeCCCcEEEEEec----CCCEEEEEEecCCCCce-EEEEECCCCCEEEEEeCCCeEEEec
No 157
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=21.49 E-value=4.7e+02 Score=23.95 Aligned_cols=200 Identities=6% Similarity=-0.104 Sum_probs=0.0
Q ss_pred eEEEecccceEEEeecCCCccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEE
Q 011826 173 YDIVNSCNGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEI 252 (476)
Q Consensus 173 ~~~~~s~~GLlcl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eV 252 (476)
..+.-+.+|-.++... .+..+.|||..|++...... ........+.+.+.... ++.....+ ..+.+
T Consensus 131 ~~v~~spdg~~l~sgs-~d~~i~iwd~~~~~~~~~~~--------~h~~~V~~~~~~~~~~~--~l~s~s~D---~~v~i 196 (344)
T 4gqb_B 131 STVSVLSSGTQAVSGS-KDICIKVWDLAQQVVLSSYR--------AHAAQVTCVAASPHKDS--VFLSCSED---NRILL 196 (344)
T ss_dssp EEEEECTTSSEEEEEE-TTSCEEEEETTTTEEEEEEC--------CCSSCEEEEEECSSCTT--EEEEEETT---SCEEE
T ss_pred EEEEECCCCCEEEEEe-CCCeEEEEECCCCcEEEEEc--------CcCCceEEEEecCCCCC--ceeeeccc---ccccc
Q ss_pred EEeCCCceEEccCCCCCCccCccceEE--cceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCcc
Q 011826 253 YSLGGAAWRKVGNAPWSPIAGLFPTYL--NGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLY 330 (476)
Q Consensus 253 yss~t~~Wr~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~ 330 (476)
|+.+++.-...-.............+. ++.+...... ...|..+|+.+.+....-.-....-.
T Consensus 197 wd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~-------dg~v~~wd~~~~~~~~~~~~h~~~v~-------- 261 (344)
T 4gqb_B 197 WDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDE-------NGTVSLVDTKSTSCVLSSAVHSQCVT-------- 261 (344)
T ss_dssp EETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEET-------TSEEEEEESCC--CCEEEECCSSCEE--------
T ss_pred ccccccceeeeeecceeeccceeeeecCCCCcceEEecc-------CCcEEEEECCCCcEEEEEcCCCCCEE--------
Q ss_pred eeeEEeeCCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEecCCcEEE--EecCCEEEEEeCCCC
Q 011826 331 DMNLGVLGGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYLDDGSLLL--FCKRRALVLYNPVEK 408 (476)
Q Consensus 331 ~~~L~~~~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~~~g~il~--~~~~~~l~~ydl~t~ 408 (476)
.+....-++.+.+... .+..+.||-+.... ..+. .++.....-+.+..+|.-++ ...++.+..+++.++
T Consensus 262 ~v~fsp~g~~~lasgs-~D~~i~vwd~~~~~-------~~~~-~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 262 GLVFSPHSVPFLASLS-EDCSLAVLDSSLSE-------LFRS-QAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp EEEECSSSSCCEEEEE-TTSCEEEECTTCCE-------EEEE-CCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC-
T ss_pred EEEEccCCCeEEEEEe-CCCeEEEEECCCCc-------EEEE-cCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCC
Q ss_pred cE
Q 011826 409 NT 410 (476)
Q Consensus 409 ~~ 410 (476)
.+
T Consensus 333 ~~ 334 (344)
T 4gqb_B 333 PL 334 (344)
T ss_dssp --
T ss_pred CC
No 158
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=21.32 E-value=4.7e+02 Score=23.88 Aligned_cols=157 Identities=10% Similarity=-0.012 Sum_probs=74.8
Q ss_pred eEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCCCce--EEccCCCCCCccCccceEE---cceEEEEEeeccCCCCC
Q 011826 222 VISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGGAAW--RKVGNAPWSPIAGLFPTYL---NGVIHWVCDDIEDDQSC 296 (476)
Q Consensus 222 ~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t~~W--r~~~~~p~~~~~~~~~v~~---~G~lywl~~~~~~~~~~ 296 (476)
...++.+|+..+ +|+..... ..++..++..++.- ..+.... ....++.+ +|.+||....
T Consensus 36 ~~~~ld~d~~~~--~lyw~D~~---~~~I~r~~~~g~~~~~~~~~~~l----~~p~glavd~~~g~ly~~d~~------- 99 (318)
T 3sov_A 36 DAAAVDFVFSHG--LIYWSDVS---EEAIKRTEFNKTESVQNVVVSGL----LSPDGLACDWLGEKLYWTDSE------- 99 (318)
T ss_dssp EEEEEEEEGGGT--EEEEEETT---TTEEEEEETTSSSCCCEEEEECC----SCCCEEEEETTTTEEEEEETT-------
T ss_pred ccEEEEEEeCCC--EEEEEECC---CCcEEEEEccCCCceEEEEcCCC----CCccEEEEEcCCCeEEEEECC-------
Confidence 467788887544 34443222 24566666655421 1111110 01133333 6899997643
Q ss_pred cceEEEEECCCceEEEEcCCCCCCCCCCccCCcceeeEEe--eCCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeC
Q 011826 297 SDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMNLGV--LGGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDN 374 (476)
Q Consensus 297 ~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~~~L~~--~~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~ 374 (476)
...|..+|+....-..+.- .... . ...++. .+|.|++.+.. ..-.|++.+-.|. . .+. .+..
T Consensus 100 ~~~I~~~~~dG~~~~~l~~-~~~~-~--------P~giavdp~~g~ly~td~~--~~~~I~r~~~dG~-~--~~~-~~~~ 163 (318)
T 3sov_A 100 TNRIEVSNLDGSLRKVLFW-QELD-Q--------PRAIALDPSSGFMYWTDWG--EVPKIERAGMDGS-S--RFI-IINS 163 (318)
T ss_dssp TTEEEEEETTSCSCEEEEC-SSCS-S--------EEEEEEEGGGTEEEEEECS--SSCEEEEEETTSC-S--CEE-EECS
T ss_pred CCEEEEEECCCCcEEEEEe-CCCC-C--------ccEEEEeCCCCEEEEEecC--CCCEEEEEEcCCC-C--eEE-EEEC
Confidence 3389999987654433321 1111 1 222333 46888888642 2345666654431 1 111 1111
Q ss_pred CCcceeeEE--EEec-CCcEEEEec-CCEEEEEeCCCCcEEEE
Q 011826 375 GYFGICRPI--KYLD-DGSLLLFCK-RRALVLYNPVEKNTRYL 413 (476)
Q Consensus 375 ~~~~~~~p~--~~~~-~g~il~~~~-~~~l~~ydl~t~~~~~v 413 (476)
.+..|- .+.. ++.|++... ...+..+|+++...+.+
T Consensus 164 ---~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~ 203 (318)
T 3sov_A 164 ---EIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAV 203 (318)
T ss_dssp ---SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred ---CCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEE
Confidence 122343 3332 334554432 35777777776544433
No 159
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=20.88 E-value=4.3e+02 Score=27.53 Aligned_cols=76 Identities=7% Similarity=0.008 Sum_probs=39.3
Q ss_pred EEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeCCCceEEccCC-CCCCccCccceEEcceEEEEEeeccCCCCCcceEE
Q 011826 223 ISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLGGAAWRKVGNA-PWSPIAGLFPTYLNGVIHWVCDDIEDDQSCSDCIV 301 (476)
Q Consensus 223 ~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~t~~Wr~~~~~-p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~Il 301 (476)
.-|+.+|+..+. |++... ....+++|+..+..-+.+... ..+.. ........+.+||.... ...|.
T Consensus 542 PnGlavd~~~~~--LY~aD~---~~~~I~~~d~dG~~~~~~~~~~~~~~~-P~glavd~~~lywtd~~-------~~~V~ 608 (699)
T 1n7d_A 542 PNGITLDLLSGR--LYWVDS---KLHSISSIDVNGGNRKTILEDEKRLAH-PFSLAVFEDKVFWTDII-------NEAIF 608 (699)
T ss_dssp CCCEEECTTTCC--EEEEET---TTTEEEEECSSSSCCEEECCCSSSCSS-CCCCEEETTEEEEECST-------TTCEE
T ss_pred ccEEEEeccCCE--EEEEec---CCCeEEEEccCCCceEEEEecCCcCCC-ceEeEEECCEEEEEeCC-------CCeEE
Confidence 345666665432 222221 235677777765433333321 11111 11233456789998743 33899
Q ss_pred EEECCCceEE
Q 011826 302 GFDFEDERFC 311 (476)
Q Consensus 302 ~fD~~~e~f~ 311 (476)
++|..+.+..
T Consensus 609 ~~d~~~G~~~ 618 (699)
T 1n7d_A 609 SANRLTGSDV 618 (699)
T ss_dssp EEETTTEEEE
T ss_pred EEEccCCCce
Confidence 9998765543
No 160
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=20.56 E-value=5.1e+02 Score=23.94 Aligned_cols=195 Identities=14% Similarity=0.110 Sum_probs=97.7
Q ss_pred ecccceEEEeecCCCccEEEEcccccceeecCCCCCCCCcCccceeEEEEeEeCCCCCeEEEEEEEcCccccEEEEEEeC
Q 011826 177 NSCNGFLCLRKPFHRNPCIICNPITGEYVTIPKPAAEDDKKTLRTVISGFGYSFRSKQYKVLRLVFDDFLNRTAEIYSLG 256 (476)
Q Consensus 177 ~s~~GLlcl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~d~~~~~yKVv~~~~~~~~~~~~eVyss~ 256 (476)
...+|.|.+.+.. ...++.+++.++....+..... ....++.+|+..+. |+..... ...+++++..
T Consensus 81 d~~~~~ly~~D~~-~~~I~r~~~~g~~~~~~~~~~~--------~~p~glavd~~~g~--ly~~d~~---~~~I~~~~~d 146 (349)
T 3v64_C 81 HHRRELVFWSDVT-LDRILRANLNGSNVEEVVSTGL--------ESPGGLAVDWVHDK--LYWTDSG---TSRIEVANLD 146 (349)
T ss_dssp ETTTTEEEEEETT-TTEEEEEETTSCSCEEEECSSC--------SCCCEEEEETTTTE--EEEEETT---TTEEEEEETT
T ss_pred eccccEEEEEecc-CCceEEEecCCCCceEEEeCCC--------CCccEEEEecCCCe--EEEEcCC---CCeEEEEcCC
Confidence 3457777776642 4568888888876544433211 12356777765442 3332221 2467777776
Q ss_pred CCceEEccCCCCCCccCccceEE---cceEEEEEeeccCCCCCcceEEEEECCCceEEEEcCCCCCCCCCCccCCcceee
Q 011826 257 GAAWRKVGNAPWSPIAGLFPTYL---NGVIHWVCDDIEDDQSCSDCIVGFDFEDERFCVIPAPPHFAEKPKTRDNLYDMN 333 (476)
Q Consensus 257 t~~Wr~~~~~p~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~~Il~fD~~~e~f~~i~lP~~~~~~~~~~~~~~~~~ 333 (476)
...-+.+.... +....++.+ +|.+||.... . ...|..+|+....-..+ +..... ..-.
T Consensus 147 G~~~~~l~~~~---l~~P~~iavdp~~g~ly~td~~-----~-~~~I~r~~~dG~~~~~~-~~~~~~---------~PnG 207 (349)
T 3v64_C 147 GAHRKVLLWQS---LEKPRAIALHPMEGTIYWTDWG-----N-TPRIEASSMDGSGRRII-ADTHLF---------WPNG 207 (349)
T ss_dssp SCSCEEEECTT---CSCEEEEEEETTTTEEEEEECS-----S-SCEEEEEETTSCSCEES-CCSSCS---------CEEE
T ss_pred CCceEEEEeCC---CCCcceEEEecCcCeEEEeccC-----C-CCEEEEEeCCCCCcEEE-EECCCC---------Ccce
Confidence 54333222110 111134433 5899998643 1 24899999876543333 111111 1222
Q ss_pred EEe--eCCeEEEEecCCCCCeEEEeeccCCCCcceEEEEEEeCCCcceeeEEEEe-cCCcEEEEe-cCCEEEEEeC-CCC
Q 011826 334 LGV--LGGCLSICDVTYFAPPDIWVMKDYGVQESWIKQLSVDNGYFGICRPIKYL-DDGSLLLFC-KRRALVLYNP-VEK 408 (476)
Q Consensus 334 L~~--~~G~L~~~~~~~~~~l~IWvl~~~~~~~~W~~~~~I~~~~~~~~~p~~~~-~~g~il~~~-~~~~l~~ydl-~t~ 408 (476)
|+. .+|.|++++. ... .|++.+-.+. .. +. .+.. ....|.++. .++.+++.. ....+..+|. ..+
T Consensus 208 la~d~~~~~lY~aD~-~~~--~I~~~~~dG~-~~--~~-~~~~---~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~ 277 (349)
T 3v64_C 208 LTIDYAGRRMYWVDA-KHH--VIERANLDGS-HR--KA-VISQ---GLPHPFAITVFEDSLYWTDWHTKSINSANKFTGK 277 (349)
T ss_dssp EEEETTTTEEEEEET-TTT--EEEEEETTSC-SC--EE-EECS---SCSSEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred EEEeCCCCEEEEEEC-CCC--EEEEEeCCCC-ce--EE-EEeC---CCCCceEEEEECCEEEEecCCCCeEEEEEccCCC
Confidence 333 4688999876 233 5555543331 11 11 1221 122454332 345565554 3468889984 444
Q ss_pred cEEEEE
Q 011826 409 NTRYLL 414 (476)
Q Consensus 409 ~~~~v~ 414 (476)
..+.+.
T Consensus 278 ~~~~i~ 283 (349)
T 3v64_C 278 NQEIIR 283 (349)
T ss_dssp SCEEEE
T ss_pred ccEEec
Confidence 445554
Done!