Query 011832
Match_columns 476
No_of_seqs 133 out of 1305
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 16:13:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011832.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011832hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 5.9E-68 2E-72 529.3 42.0 433 6-470 12-453 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 2.2E-66 7.6E-71 528.3 41.2 458 5-471 6-479 (482)
3 2c1x_A UDP-glucose flavonoid 3 100.0 6E-62 2.1E-66 490.9 39.2 442 1-471 1-452 (456)
4 2vch_A Hydroquinone glucosyltr 100.0 7.6E-60 2.6E-64 478.6 46.0 438 5-471 4-469 (480)
5 2acv_A Triterpene UDP-glucosyl 100.0 3.2E-59 1.1E-63 472.3 34.7 434 3-470 5-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 3.1E-44 1E-48 360.8 33.1 397 4-469 9-419 (424)
7 4amg_A Snogd; transferase, pol 100.0 2.4E-43 8.1E-48 351.5 28.4 359 5-469 20-398 (400)
8 1iir_A Glycosyltransferase GTF 100.0 2E-43 6.9E-48 353.7 21.5 384 8-471 1-400 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 1.8E-42 6.1E-47 346.9 20.4 368 8-450 1-385 (416)
10 3rsc_A CALG2; TDP, enediyne, s 100.0 3.9E-39 1.3E-43 322.6 34.2 377 5-468 18-411 (415)
11 3h4t_A Glycosyltransferase GTF 100.0 4.9E-40 1.7E-44 327.7 24.9 371 8-470 1-381 (404)
12 3ia7_A CALG4; glycosysltransfe 100.0 3.1E-38 1.1E-42 314.6 32.7 372 7-469 4-397 (402)
13 2p6p_A Glycosyl transferase; X 100.0 4.3E-38 1.5E-42 311.8 31.4 354 8-471 1-379 (384)
14 2iyf_A OLED, oleandomycin glyc 100.0 4.8E-38 1.7E-42 316.2 30.9 368 1-450 1-383 (430)
15 2yjn_A ERYCIII, glycosyltransf 100.0 4.7E-38 1.6E-42 317.2 28.4 375 5-470 18-434 (441)
16 4fzr_A SSFS6; structural genom 100.0 4.1E-36 1.4E-40 299.1 21.9 346 4-450 12-384 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 1E-34 3.4E-39 289.0 27.4 351 6-469 19-395 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 1.8E-33 6.3E-38 279.2 28.1 355 7-469 1-386 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 6.4E-31 2.2E-35 262.6 32.3 367 4-466 17-404 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 2.3E-26 7.8E-31 225.3 28.1 320 8-450 3-337 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 3E-27 1E-31 206.1 15.6 162 275-450 7-170 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.8 7.3E-19 2.5E-23 172.0 29.9 310 8-441 7-330 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.6 1.7E-13 5.9E-18 127.5 22.9 117 288-414 156-273 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.6 4.3E-15 1.5E-19 132.6 8.5 134 287-429 26-196 (224)
25 3okp_A GDP-mannose-dependent a 99.5 2.1E-11 7.1E-16 120.0 25.4 352 4-474 1-381 (394)
26 3ot5_A UDP-N-acetylglucosamine 99.4 3.2E-11 1.1E-15 119.1 20.9 353 5-469 25-392 (403)
27 1v4v_A UDP-N-acetylglucosamine 99.4 1.2E-10 4E-15 114.1 23.8 129 289-432 198-334 (376)
28 2r60_A Glycosyl transferase, g 99.3 4.5E-10 1.5E-14 114.4 27.7 361 1-432 1-424 (499)
29 3c48_A Predicted glycosyltrans 99.3 1.2E-09 4E-14 109.2 29.1 355 5-447 18-408 (438)
30 3fro_A GLGA glycogen synthase; 99.3 1.9E-09 6.6E-14 107.4 30.1 394 6-472 1-430 (439)
31 1vgv_A UDP-N-acetylglucosamine 99.3 9.5E-10 3.3E-14 107.8 25.7 131 288-432 204-342 (384)
32 3dzc_A UDP-N-acetylglucosamine 99.3 2.4E-10 8.1E-15 112.7 20.9 331 6-439 24-372 (396)
33 2gek_A Phosphatidylinositol ma 99.3 2.6E-09 8.9E-14 105.4 28.6 343 4-471 17-382 (406)
34 3beo_A UDP-N-acetylglucosamine 99.2 7E-09 2.4E-13 101.2 28.0 319 3-432 4-342 (375)
35 2iuy_A Avigt4, glycosyltransfe 99.2 9.5E-10 3.2E-14 106.1 20.1 125 292-431 164-307 (342)
36 2iw1_A Lipopolysaccharide core 99.1 1.9E-07 6.4E-12 90.9 30.6 131 289-432 195-337 (374)
37 2x6q_A Trehalose-synthase TRET 99.0 5.5E-08 1.9E-12 96.3 25.2 163 291-470 232-412 (416)
38 2jjm_A Glycosyl transferase, g 99.0 3.5E-07 1.2E-11 89.8 29.0 349 7-471 15-384 (394)
39 4hwg_A UDP-N-acetylglucosamine 99.0 4.7E-08 1.6E-12 95.5 20.1 318 7-432 9-342 (385)
40 1rzu_A Glycogen synthase 1; gl 98.8 5.1E-06 1.7E-10 83.9 28.7 160 291-471 292-474 (485)
41 3s28_A Sucrose synthase 1; gly 98.8 2.8E-07 9.7E-12 97.8 19.1 166 290-470 572-767 (816)
42 3oy2_A Glycosyltransferase B73 98.7 7.9E-06 2.7E-10 80.5 25.9 166 289-471 183-389 (413)
43 2qzs_A Glycogen synthase; glyc 98.7 1.6E-05 5.5E-10 80.2 28.2 163 290-472 292-476 (485)
44 2f9f_A First mannosyl transfer 98.6 2.2E-07 7.5E-12 80.4 11.5 141 291-445 24-174 (177)
45 2hy7_A Glucuronosyltransferase 98.3 0.00026 8.8E-09 69.6 25.5 75 344-432 263-352 (406)
46 2xci_A KDO-transferase, 3-deox 98.1 0.0012 4E-08 64.1 25.1 95 347-447 261-362 (374)
47 2vsy_A XCC0866; transferase, g 98.0 0.00032 1.1E-08 72.1 19.8 115 346-470 434-557 (568)
48 3qhp_A Type 1 capsular polysac 97.9 0.00016 5.6E-09 61.1 13.2 128 290-432 2-140 (166)
49 4gyw_A UDP-N-acetylglucosamine 97.9 0.00064 2.2E-08 71.8 19.6 122 287-414 520-652 (723)
50 3q3e_A HMW1C-like glycosyltran 97.8 0.00028 9.5E-09 71.7 14.9 143 289-439 440-593 (631)
51 3rhz_A GTF3, nucleotide sugar 97.6 0.00021 7.1E-09 68.2 9.2 113 344-469 213-337 (339)
52 2bfw_A GLGA glycogen synthase; 97.5 0.0028 9.4E-08 55.1 14.5 128 292-432 38-181 (200)
53 3tov_A Glycosyl transferase fa 97.4 0.021 7E-07 54.6 20.7 106 5-137 6-115 (349)
54 1psw_A ADP-heptose LPS heptosy 97.3 0.059 2E-06 51.2 22.7 95 288-390 179-286 (348)
55 2x0d_A WSAF; GT4 family, trans 95.8 0.024 8.3E-07 55.5 8.4 85 345-440 294-385 (413)
56 3vue_A GBSS-I, granule-bound s 95.6 0.2 6.9E-06 50.7 14.8 165 290-471 327-510 (536)
57 2gt1_A Lipopolysaccharide hept 95.5 1.3 4.5E-05 41.3 19.5 131 288-431 177-321 (326)
58 2phj_A 5'-nucleotidase SURE; S 91.5 1.1 3.8E-05 39.9 9.7 113 8-140 2-127 (251)
59 3ty2_A 5'-nucleotidase SURE; s 91.4 0.71 2.4E-05 41.3 8.3 115 5-141 9-136 (261)
60 1uqt_A Alpha, alpha-trehalose- 91.2 4.3 0.00015 40.2 14.9 109 348-472 333-454 (482)
61 3t5t_A Putative glycosyltransf 90.8 5.4 0.00018 39.6 15.0 110 347-472 353-473 (496)
62 3vue_A GBSS-I, granule-bound s 90.6 0.15 5.1E-06 51.7 3.7 42 4-45 6-53 (536)
63 2x0d_A WSAF; GT4 family, trans 88.0 0.35 1.2E-05 47.2 4.0 41 5-45 44-89 (413)
64 3q0i_A Methionyl-tRNA formyltr 86.0 2 6.9E-05 40.0 7.8 111 3-142 3-117 (318)
65 1j9j_A Stationary phase surviV 84.7 5 0.00017 35.6 9.4 115 8-140 1-128 (247)
66 1l5x_A SurviVal protein E; str 84.0 6.5 0.00022 35.6 9.9 114 8-141 1-128 (280)
67 2v4n_A Multifunctional protein 83.8 7.5 0.00026 34.7 10.1 112 7-140 1-126 (254)
68 1kjn_A MTH0777; hypotethical p 83.5 1.7 5.8E-05 34.9 5.0 43 4-46 3-47 (157)
69 2wqk_A 5'-nucleotidase SURE; S 82.4 1.7 6E-05 38.8 5.4 112 9-140 3-127 (251)
70 3fgn_A Dethiobiotin synthetase 82.2 9.1 0.00031 34.1 10.2 121 6-142 24-167 (251)
71 1g5t_A COB(I)alamin adenosyltr 80.4 21 0.00072 30.3 11.3 39 6-44 27-65 (196)
72 2e6c_A 5'-nucleotidase SURE; S 80.2 15 0.00051 32.5 10.6 113 8-140 1-129 (244)
73 4b4o_A Epimerase family protei 78.5 11 0.00038 34.2 9.8 33 8-44 1-33 (298)
74 1ccw_A Protein (glutamate muta 78.0 3.1 0.00011 33.3 5.1 48 6-53 2-49 (137)
75 3zqu_A Probable aromatic acid 77.9 3.5 0.00012 35.6 5.7 42 4-46 1-42 (209)
76 4dzz_A Plasmid partitioning pr 77.8 12 0.0004 31.7 9.3 39 8-46 1-41 (206)
77 2bw0_A 10-FTHFDH, 10-formyltet 76.2 16 0.00056 33.9 10.2 104 5-142 20-131 (329)
78 1fmt_A Methionyl-tRNA FMet for 75.9 15 0.0005 34.0 9.7 42 99-142 71-113 (314)
79 3nb0_A Glycogen [starch] synth 75.7 17 0.00059 37.4 10.8 73 351-430 498-592 (725)
80 3l7i_A Teichoic acid biosynthe 75.0 15 0.00052 38.4 10.8 114 351-474 604-723 (729)
81 2vqe_B 30S ribosomal protein S 74.2 15 0.00051 32.7 8.8 32 110-141 157-190 (256)
82 3qxc_A Dethiobiotin synthetase 73.6 14 0.00049 32.6 8.7 37 6-42 19-57 (242)
83 3vot_A L-amino acid ligase, BL 71.8 27 0.00094 33.5 11.2 97 4-135 2-101 (425)
84 3bfv_A CAPA1, CAPB2, membrane 71.7 12 0.00041 33.7 8.0 41 5-45 79-121 (271)
85 2yxb_A Coenzyme B12-dependent 71.3 4.3 0.00015 33.5 4.4 49 5-53 16-64 (161)
86 4dim_A Phosphoribosylglycinami 70.8 20 0.00069 34.1 9.9 37 3-44 3-39 (403)
87 3iqw_A Tail-anchored protein t 70.4 15 0.0005 34.3 8.4 40 7-46 15-55 (334)
88 1id1_A Putative potassium chan 69.2 3.7 0.00013 33.3 3.6 34 6-44 2-35 (153)
89 2g1u_A Hypothetical protein TM 69.0 5.1 0.00017 32.5 4.4 39 1-44 13-51 (155)
90 1p3y_1 MRSD protein; flavoprot 68.5 4.3 0.00015 34.7 3.9 44 1-45 2-45 (194)
91 3auf_A Glycinamide ribonucleot 68.2 58 0.002 28.3 11.3 107 5-141 20-132 (229)
92 3cio_A ETK, tyrosine-protein k 67.5 16 0.00054 33.4 7.9 40 6-45 102-143 (299)
93 3bbn_B Ribosomal protein S2; s 67.3 16 0.00053 32.0 7.3 31 111-141 157-189 (231)
94 1bg6_A N-(1-D-carboxylethyl)-L 67.3 3.6 0.00012 38.7 3.6 34 5-43 2-35 (359)
95 1y80_A Predicted cobalamin bin 66.6 8.3 0.00028 33.2 5.5 48 6-53 87-134 (210)
96 3g0o_A 3-hydroxyisobutyrate de 66.3 3.3 0.00011 38.2 3.0 38 1-43 1-38 (303)
97 3la6_A Tyrosine-protein kinase 66.1 16 0.00054 33.3 7.5 42 5-46 89-132 (286)
98 1mvl_A PPC decarboxylase athal 66.1 8.3 0.00028 33.3 5.3 41 4-46 16-56 (209)
99 3mcu_A Dipicolinate synthase, 65.5 6.6 0.00023 33.8 4.5 41 4-45 2-43 (207)
100 1lss_A TRK system potassium up 65.1 4.2 0.00014 32.0 3.1 33 6-43 3-35 (140)
101 3tqq_A Methionyl-tRNA formyltr 64.4 29 0.001 32.0 9.0 110 7-142 2-112 (314)
102 3dfz_A SIRC, precorrin-2 dehyd 64.2 15 0.00051 32.0 6.6 145 288-450 31-185 (223)
103 3ug7_A Arsenical pump-driving 64.0 17 0.00059 34.1 7.6 46 7-53 25-71 (349)
104 2i2x_B MTAC, methyltransferase 63.4 11 0.00037 33.8 5.8 47 5-51 121-167 (258)
105 3ezx_A MMCP 1, monomethylamine 63.2 12 0.0004 32.5 5.8 49 5-53 90-138 (215)
106 3ghy_A Ketopantoate reductase 63.2 3.7 0.00013 38.5 2.7 34 6-44 2-35 (335)
107 3lqk_A Dipicolinate synthase s 62.9 9.4 0.00032 32.7 5.0 41 5-46 5-46 (201)
108 1sbz_A Probable aromatic acid 62.8 10 0.00035 32.4 5.1 38 8-46 1-39 (197)
109 2ywr_A Phosphoribosylglycinami 59.8 63 0.0021 27.8 9.9 104 8-141 2-111 (216)
110 4gi5_A Quinone reductase; prot 59.1 14 0.00049 33.4 5.8 39 5-43 20-61 (280)
111 3gpi_A NAD-dependent epimerase 58.8 11 0.00037 34.0 5.0 34 6-44 2-35 (286)
112 3dhn_A NAD-dependent epimerase 58.7 9.3 0.00032 33.0 4.4 34 7-44 4-37 (227)
113 3l6d_A Putative oxidoreductase 58.6 5.7 0.00019 36.6 3.1 38 1-43 3-40 (306)
114 2qs7_A Uncharacterized protein 57.4 13 0.00045 29.8 4.7 35 10-44 11-45 (144)
115 2fb6_A Conserved hypothetical 57.1 12 0.00041 28.9 4.2 44 3-46 3-50 (117)
116 3qha_A Putative oxidoreductase 57.0 6 0.0002 36.2 2.9 34 5-43 13-46 (296)
117 3hn2_A 2-dehydropantoate 2-red 56.9 10 0.00035 34.9 4.6 40 8-53 3-42 (312)
118 3cky_A 2-hydroxymethyl glutara 56.3 11 0.00039 34.3 4.8 34 5-43 2-35 (301)
119 3qjg_A Epidermin biosynthesis 55.9 17 0.00057 30.4 5.2 38 8-46 6-43 (175)
120 1jkx_A GART;, phosphoribosylgl 55.2 1E+02 0.0034 26.4 10.6 103 8-141 1-110 (212)
121 2ph1_A Nucleotide-binding prot 54.5 75 0.0026 28.0 9.9 40 8-47 18-59 (262)
122 4e21_A 6-phosphogluconate dehy 54.3 8.7 0.0003 36.3 3.6 35 4-43 19-53 (358)
123 3ew7_A LMO0794 protein; Q8Y8U8 54.3 14 0.00048 31.5 4.8 33 8-44 1-33 (221)
124 3r8n_B 30S ribosomal protein S 54.0 18 0.00061 31.4 5.2 32 110-141 148-181 (218)
125 3kjh_A CO dehydrogenase/acetyl 54.0 9.1 0.00031 33.6 3.6 39 8-46 1-39 (254)
126 3eag_A UDP-N-acetylmuramate:L- 53.9 13 0.00043 34.6 4.7 34 7-44 4-37 (326)
127 2r8r_A Sensor protein; KDPD, P 53.8 18 0.0006 31.7 5.2 40 6-45 5-44 (228)
128 2gk4_A Conserved hypothetical 53.8 22 0.00074 31.2 5.8 26 18-45 28-53 (232)
129 3dfu_A Uncharacterized protein 53.6 9.7 0.00033 33.5 3.5 34 5-43 4-37 (232)
130 1qkk_A DCTD, C4-dicarboxylate 53.5 46 0.0016 26.1 7.6 48 383-432 74-121 (155)
131 3i83_A 2-dehydropantoate 2-red 53.2 12 0.0004 34.7 4.3 40 8-53 3-42 (320)
132 4dll_A 2-hydroxy-3-oxopropiona 52.8 15 0.00052 33.9 5.1 34 5-43 29-62 (320)
133 3hwr_A 2-dehydropantoate 2-red 52.7 7.8 0.00027 35.9 3.0 31 6-41 18-48 (318)
134 3to5_A CHEY homolog; alpha(5)b 52.5 81 0.0028 24.6 9.6 108 301-431 19-132 (134)
135 3av3_A Phosphoribosylglycinami 52.5 1.1E+02 0.0038 26.1 10.2 104 8-141 4-113 (212)
136 1qyd_A Pinoresinol-lariciresin 52.1 13 0.00046 33.8 4.5 34 7-44 4-37 (313)
137 2hy5_A Putative sulfurtransfer 52.0 21 0.00072 27.9 5.1 37 8-44 1-41 (130)
138 3tqr_A Phosphoribosylglycinami 51.0 1.2E+02 0.004 26.1 10.0 106 5-141 3-114 (215)
139 4huj_A Uncharacterized protein 50.9 7.6 0.00026 33.7 2.4 39 5-49 21-59 (220)
140 3llv_A Exopolyphosphatase-rela 50.8 9.3 0.00032 30.2 2.8 33 7-44 6-38 (141)
141 3enk_A UDP-glucose 4-epimerase 50.8 15 0.00051 34.0 4.7 36 4-43 2-37 (341)
142 3da8_A Probable 5'-phosphoribo 50.8 42 0.0014 29.0 7.1 110 4-141 9-120 (215)
143 2r6j_A Eugenol synthase 1; phe 50.7 16 0.00055 33.4 4.8 33 9-45 13-45 (318)
144 3mc3_A DSRE/DSRF-like family p 50.7 19 0.00067 28.3 4.7 38 7-44 15-55 (134)
145 1z82_A Glycerol-3-phosphate de 50.6 11 0.00036 35.2 3.6 32 7-43 14-45 (335)
146 2ew2_A 2-dehydropantoate 2-red 50.5 10 0.00035 34.7 3.5 32 7-43 3-34 (316)
147 2qyt_A 2-dehydropantoate 2-red 49.8 5.1 0.00017 36.9 1.2 33 6-43 7-45 (317)
148 4hb9_A Similarities with proba 49.7 11 0.00038 35.8 3.6 32 7-43 1-32 (412)
149 3dm5_A SRP54, signal recogniti 49.6 51 0.0017 32.0 8.3 42 7-48 100-141 (443)
150 2vo1_A CTP synthase 1; pyrimid 49.4 18 0.00062 32.3 4.5 42 5-46 20-64 (295)
151 3k96_A Glycerol-3-phosphate de 49.2 10 0.00034 35.9 3.1 35 5-44 27-61 (356)
152 3q9l_A Septum site-determining 49.1 1.3E+02 0.0043 26.1 10.5 37 9-45 3-41 (260)
153 1dhr_A Dihydropteridine reduct 48.5 26 0.00088 30.6 5.7 39 1-43 1-39 (241)
154 3kcq_A Phosphoribosylglycinami 48.4 66 0.0023 27.7 8.0 104 3-141 4-113 (215)
155 1ks9_A KPA reductase;, 2-dehyd 48.0 14 0.00047 33.3 3.8 31 8-43 1-31 (291)
156 2lnd_A De novo designed protei 47.8 22 0.00074 24.8 3.8 50 382-431 49-100 (112)
157 2rjn_A Response regulator rece 47.7 75 0.0026 24.8 8.0 57 383-443 78-135 (154)
158 2gdz_A NAD+-dependent 15-hydro 47.6 33 0.0011 30.4 6.3 39 1-43 1-39 (267)
159 1psw_A ADP-heptose LPS heptosy 47.5 1.7E+02 0.0056 26.7 11.8 103 8-140 181-288 (348)
160 3igf_A ALL4481 protein; two-do 47.3 25 0.00084 33.4 5.5 38 8-46 2-40 (374)
161 3c24_A Putative oxidoreductase 47.1 16 0.00054 33.1 4.1 31 8-43 12-43 (286)
162 2bln_A Protein YFBG; transfera 46.9 81 0.0028 28.8 8.9 40 100-141 66-106 (305)
163 3h2s_A Putative NADH-flavin re 46.8 19 0.00064 30.8 4.4 32 8-43 1-32 (224)
164 2ejb_A Probable aromatic acid 46.7 34 0.0012 28.8 5.8 41 8-50 2-42 (189)
165 4e5s_A MCCFLIKE protein (BA_56 46.6 26 0.00091 32.5 5.5 73 302-392 62-136 (331)
166 2i2c_A Probable inorganic poly 46.6 15 0.0005 33.2 3.7 52 363-432 36-93 (272)
167 3doj_A AT3G25530, dehydrogenas 46.2 16 0.00056 33.5 4.1 34 5-43 19-52 (310)
168 3grc_A Sensor protein, kinase; 46.2 81 0.0028 24.0 7.9 107 302-432 14-127 (140)
169 2zki_A 199AA long hypothetical 45.8 21 0.00073 30.0 4.5 36 7-43 4-40 (199)
170 2raf_A Putative dinucleotide-b 45.8 17 0.00057 31.2 3.8 33 6-43 18-50 (209)
171 3e8x_A Putative NAD-dependent 45.5 24 0.00082 30.5 4.9 36 5-44 19-54 (236)
172 1p9o_A Phosphopantothenoylcyst 45.4 14 0.00048 34.1 3.4 24 23-46 67-90 (313)
173 3l4e_A Uncharacterized peptida 45.3 39 0.0013 28.9 6.1 48 277-324 16-63 (206)
174 4e12_A Diketoreductase; oxidor 45.1 17 0.0006 32.8 4.0 34 5-43 2-35 (283)
175 1qzu_A Hypothetical protein MD 45.0 21 0.00072 30.6 4.2 41 5-46 17-58 (206)
176 1evy_A Glycerol-3-phosphate de 44.9 9.5 0.00032 36.0 2.3 30 9-43 17-46 (366)
177 2w36_A Endonuclease V; hypoxan 44.8 30 0.001 30.1 5.1 41 99-139 91-138 (225)
178 2qxy_A Response regulator; reg 44.7 1E+02 0.0035 23.4 9.3 106 302-432 12-121 (142)
179 3l4b_C TRKA K+ channel protien 44.0 8.7 0.0003 33.2 1.7 32 8-44 1-32 (218)
180 1hdo_A Biliverdin IX beta redu 43.6 38 0.0013 28.1 5.9 32 8-43 4-35 (206)
181 2l2q_A PTS system, cellobiose- 43.1 24 0.00082 26.6 3.9 38 6-43 3-40 (109)
182 1qyc_A Phenylcoumaran benzylic 43.1 23 0.00077 32.1 4.5 34 7-44 4-37 (308)
183 3s2u_A UDP-N-acetylglucosamine 43.0 38 0.0013 31.8 6.2 26 362-389 92-120 (365)
184 1y1p_A ARII, aldehyde reductas 42.9 28 0.00096 31.9 5.2 37 3-43 7-43 (342)
185 1pzg_A LDH, lactate dehydrogen 42.9 14 0.00049 34.3 3.1 36 4-44 6-42 (331)
186 3of5_A Dethiobiotin synthetase 42.6 26 0.00088 30.6 4.6 37 6-42 2-40 (228)
187 3pid_A UDP-glucose 6-dehydroge 42.0 17 0.00058 35.3 3.5 36 2-43 31-66 (432)
188 2jk1_A HUPR, hydrogenase trans 41.8 91 0.0031 23.7 7.5 49 383-432 71-119 (139)
189 1b93_A Protein (methylglyoxal 41.8 1.4E+02 0.0047 24.1 8.5 100 4-138 8-119 (152)
190 2d1p_A TUSD, hypothetical UPF0 41.7 43 0.0015 26.6 5.4 38 6-43 11-52 (140)
191 3fwz_A Inner membrane protein 41.7 16 0.00053 28.9 2.8 33 7-44 7-39 (140)
192 4g65_A TRK system potassium up 41.7 7.8 0.00027 38.1 1.1 40 6-52 2-41 (461)
193 2r85_A PURP protein PF1517; AT 41.0 24 0.00081 32.5 4.4 33 7-45 2-34 (334)
194 2rir_A Dipicolinate synthase, 40.9 40 0.0014 30.6 5.8 35 3-42 3-37 (300)
195 3dqp_A Oxidoreductase YLBE; al 40.9 23 0.00077 30.3 3.9 33 8-44 1-33 (219)
196 3qvl_A Putative hydantoin race 40.7 53 0.0018 28.9 6.3 38 7-44 1-39 (245)
197 3euw_A MYO-inositol dehydrogen 40.3 1.9E+02 0.0064 26.5 10.6 109 290-414 6-122 (344)
198 1v0j_A UDP-galactopyranose mut 39.8 24 0.00081 33.7 4.3 39 1-44 1-40 (399)
199 3v2h_A D-beta-hydroxybutyrate 39.4 1.3E+02 0.0044 26.8 9.0 32 9-43 26-57 (281)
200 1ehi_A LMDDL2, D-alanine:D-lac 39.4 26 0.00089 33.2 4.4 39 6-44 2-45 (377)
201 3n7t_A Macrophage binding prot 39.4 61 0.0021 28.6 6.5 37 8-44 10-57 (247)
202 3ioy_A Short-chain dehydrogena 39.4 42 0.0014 30.8 5.7 40 1-43 1-40 (319)
203 3vps_A TUNA, NAD-dependent epi 39.2 18 0.00063 32.9 3.3 40 1-44 1-40 (321)
204 3s40_A Diacylglycerol kinase; 39.0 65 0.0022 29.3 7.0 80 291-392 12-97 (304)
205 3lp6_A Phosphoribosylaminoimid 39.0 39 0.0013 27.9 4.7 36 1-37 1-36 (174)
206 2h78_A Hibadh, 3-hydroxyisobut 38.9 25 0.00085 32.0 4.1 32 7-43 3-34 (302)
207 1jx7_A Hypothetical protein YC 38.9 36 0.0012 25.6 4.4 36 9-44 3-43 (117)
208 1u0t_A Inorganic polyphosphate 38.3 32 0.0011 31.5 4.7 55 359-431 72-130 (307)
209 1txg_A Glycerol-3-phosphate de 38.3 17 0.00057 33.6 2.8 31 8-43 1-31 (335)
210 1qgu_B Protein (nitrogenase mo 38.1 1.4E+02 0.0049 29.5 9.7 33 101-138 426-465 (519)
211 3c1o_A Eugenol synthase; pheny 38.1 30 0.001 31.6 4.5 35 7-45 4-38 (321)
212 3obb_A Probable 3-hydroxyisobu 38.0 32 0.0011 31.4 4.6 30 9-43 5-34 (300)
213 3dtt_A NADP oxidoreductase; st 38.0 25 0.00086 30.9 3.8 34 5-43 17-50 (245)
214 4h1h_A LMO1638 protein; MCCF-l 38.0 42 0.0014 31.1 5.5 73 302-392 62-136 (327)
215 3zzm_A Bifunctional purine bio 37.9 90 0.0031 30.6 7.8 102 5-122 7-113 (523)
216 3l77_A Short-chain alcohol deh 37.9 35 0.0012 29.4 4.8 33 8-43 2-34 (235)
217 3ego_A Probable 2-dehydropanto 37.9 17 0.00059 33.3 2.8 32 7-44 2-33 (307)
218 3to5_A CHEY homolog; alpha(5)b 37.8 44 0.0015 26.2 4.9 33 111-143 57-98 (134)
219 1jay_A Coenzyme F420H2:NADP+ o 37.7 24 0.00083 30.0 3.6 32 8-43 1-32 (212)
220 4dmm_A 3-oxoacyl-[acyl-carrier 37.6 42 0.0014 29.9 5.3 37 4-43 24-60 (269)
221 3pef_A 6-phosphogluconate dehy 37.6 25 0.00087 31.7 3.9 32 7-43 1-32 (287)
222 2iz6_A Molybdenum cofactor car 37.6 53 0.0018 27.3 5.5 100 277-392 35-139 (176)
223 2dpo_A L-gulonate 3-dehydrogen 37.6 20 0.00068 33.2 3.2 37 1-43 1-37 (319)
224 1g63_A Epidermin modifying enz 37.6 32 0.0011 28.8 4.2 36 9-45 4-39 (181)
225 3lf2_A Short chain oxidoreduct 37.5 43 0.0015 29.6 5.4 40 1-43 1-40 (265)
226 3qsg_A NAD-binding phosphogluc 37.5 18 0.0006 33.3 2.8 33 6-43 23-56 (312)
227 1yb4_A Tartronic semialdehyde 37.2 30 0.001 31.2 4.4 31 7-42 3-33 (295)
228 3t6k_A Response regulator rece 37.2 1.3E+02 0.0046 22.7 9.0 48 383-432 77-124 (136)
229 3q2i_A Dehydrogenase; rossmann 37.2 1.8E+02 0.0063 26.7 10.0 125 289-431 14-149 (354)
230 2ewd_A Lactate dehydrogenase,; 37.2 17 0.0006 33.4 2.7 36 4-44 1-37 (317)
231 3qvo_A NMRA family protein; st 37.2 28 0.00097 30.1 4.0 33 8-43 23-56 (236)
232 3ic5_A Putative saccharopine d 37.0 27 0.00092 26.0 3.4 32 7-43 5-37 (118)
233 1i36_A Conserved hypothetical 37.0 21 0.00071 31.7 3.1 30 8-42 1-30 (264)
234 3tov_A Glycosyl transferase fa 36.7 1.7E+02 0.006 26.9 9.7 101 7-141 185-289 (349)
235 3tl4_X Glutaminyl-tRNA synthet 36.4 68 0.0023 26.9 5.9 69 395-469 100-177 (187)
236 1zl0_A Hypothetical protein PA 36.3 53 0.0018 30.1 5.8 75 301-393 63-139 (311)
237 3g79_A NDP-N-acetyl-D-galactos 36.2 30 0.001 34.0 4.3 36 5-45 16-53 (478)
238 2bcg_G Secretory pathway GDP d 36.1 22 0.00074 34.7 3.3 39 1-44 5-43 (453)
239 3gl9_A Response regulator; bet 36.1 63 0.0021 24.1 5.5 37 104-142 41-86 (122)
240 4eg0_A D-alanine--D-alanine li 35.9 49 0.0017 30.2 5.7 38 7-44 13-54 (317)
241 3gl9_A Response regulator; bet 35.9 1.3E+02 0.0045 22.2 8.3 47 383-431 75-121 (122)
242 3lp6_A Phosphoribosylaminoimid 35.8 1.8E+02 0.0063 23.9 8.4 137 290-451 8-156 (174)
243 2q3e_A UDP-glucose 6-dehydroge 35.7 31 0.0011 33.8 4.4 35 4-43 2-38 (467)
244 3u5t_A 3-oxoacyl-[acyl-carrier 35.6 44 0.0015 29.7 5.1 38 3-43 22-59 (267)
245 3kcn_A Adenylate cyclase homol 35.5 92 0.0031 24.2 6.7 49 382-432 74-123 (151)
246 3lk7_A UDP-N-acetylmuramoylala 35.3 41 0.0014 32.8 5.2 33 6-43 8-40 (451)
247 3op4_A 3-oxoacyl-[acyl-carrier 35.2 54 0.0018 28.6 5.6 34 7-43 8-41 (248)
248 3bul_A Methionine synthase; tr 35.2 43 0.0015 33.7 5.3 48 6-53 97-144 (579)
249 2wm3_A NMRA-like family domain 35.2 34 0.0012 30.8 4.4 34 7-44 5-39 (299)
250 3edm_A Short chain dehydrogena 35.1 44 0.0015 29.5 5.0 40 1-43 1-40 (259)
251 4h3k_B RNA polymerase II subun 34.8 2.1E+02 0.0072 24.3 8.7 39 5-46 23-61 (214)
252 1mv8_A GMD, GDP-mannose 6-dehy 34.8 35 0.0012 33.0 4.6 31 8-43 1-31 (436)
253 4g6h_A Rotenone-insensitive NA 34.5 23 0.00079 35.1 3.3 35 5-44 40-74 (502)
254 3sr3_A Microcin immunity prote 34.5 51 0.0017 30.6 5.4 73 302-392 63-137 (336)
255 1f0y_A HCDH, L-3-hydroxyacyl-C 34.4 26 0.0009 31.9 3.4 31 8-43 16-46 (302)
256 2vsy_A XCC0866; transferase, g 34.3 42 0.0014 33.4 5.3 40 5-44 203-246 (568)
257 4gbj_A 6-phosphogluconate dehy 34.3 34 0.0012 31.2 4.1 30 9-43 7-36 (297)
258 3i4f_A 3-oxoacyl-[acyl-carrier 34.2 52 0.0018 28.9 5.4 35 6-43 5-39 (264)
259 2pn1_A Carbamoylphosphate synt 34.1 46 0.0016 30.5 5.2 33 6-44 3-37 (331)
260 1e4e_A Vancomycin/teicoplanin 34.1 27 0.00093 32.4 3.6 38 6-44 2-44 (343)
261 2zyd_A 6-phosphogluconate dehy 34.1 20 0.00067 35.4 2.6 34 5-43 13-46 (480)
262 1y56_B Sarcosine oxidase; dehy 34.0 23 0.0008 33.2 3.1 36 4-44 2-37 (382)
263 3lrx_A Putative hydrogenase; a 33.8 39 0.0013 27.4 4.0 38 7-47 23-60 (158)
264 2hmt_A YUAA protein; RCK, KTN, 33.7 22 0.00074 27.7 2.4 32 7-43 6-37 (144)
265 2bi7_A UDP-galactopyranose mut 33.7 49 0.0017 31.3 5.4 33 7-44 3-35 (384)
266 2c5m_A CTP synthase; cytidine 33.6 30 0.001 30.7 3.3 40 6-45 21-63 (294)
267 1fjh_A 3alpha-hydroxysteroid d 33.6 50 0.0017 28.8 5.1 33 8-43 1-33 (257)
268 1cyd_A Carbonyl reductase; sho 33.5 72 0.0025 27.4 6.2 39 1-43 1-39 (244)
269 2uyy_A N-PAC protein; long-cha 33.5 29 0.00099 31.8 3.6 34 5-43 28-61 (316)
270 2gas_A Isoflavone reductase; N 33.3 33 0.0011 31.0 3.9 33 8-44 3-35 (307)
271 1ydg_A Trp repressor binding p 33.3 59 0.002 27.5 5.4 38 6-43 5-43 (211)
272 2yvq_A Carbamoyl-phosphate syn 33.2 79 0.0027 25.1 5.7 97 11-138 27-131 (143)
273 1c0p_A D-amino acid oxidase; a 33.1 36 0.0012 31.7 4.3 36 4-44 3-38 (363)
274 3n0v_A Formyltetrahydrofolate 33.1 2.7E+02 0.0092 25.0 10.1 107 4-141 87-197 (286)
275 3guy_A Short-chain dehydrogena 32.9 33 0.0011 29.5 3.7 33 8-43 1-33 (230)
276 4eso_A Putative oxidoreductase 32.9 53 0.0018 28.8 5.2 33 8-43 8-40 (255)
277 4e3z_A Putative oxidoreductase 32.9 67 0.0023 28.4 5.9 34 7-43 25-58 (272)
278 2q5c_A NTRC family transcripti 32.8 35 0.0012 28.9 3.7 30 362-394 51-80 (196)
279 2gf2_A Hibadh, 3-hydroxyisobut 32.7 30 0.001 31.2 3.6 31 8-43 1-31 (296)
280 2b69_A UDP-glucuronate decarbo 32.6 40 0.0014 31.0 4.5 35 5-43 25-59 (343)
281 4ezb_A Uncharacterized conserv 32.6 29 0.00099 32.0 3.4 32 7-43 24-56 (317)
282 4grd_A N5-CAIR mutase, phospho 32.4 69 0.0024 26.4 5.1 31 5-36 10-40 (173)
283 3goc_A Endonuclease V; alpha-b 32.3 66 0.0023 28.1 5.3 41 99-139 95-142 (237)
284 3kkl_A Probable chaperone prot 32.2 70 0.0024 28.1 5.7 37 8-44 4-51 (244)
285 1vdc_A NTR, NADPH dependent th 32.1 16 0.00053 33.7 1.5 38 1-43 1-39 (333)
286 3se7_A VANA; alpha-beta struct 32.1 28 0.00095 32.5 3.2 38 6-44 2-44 (346)
287 2vns_A Metalloreductase steap3 32.1 28 0.00095 29.9 3.0 33 6-43 27-59 (215)
288 2lpm_A Two-component response 32.0 31 0.0011 26.7 3.0 35 103-139 47-86 (123)
289 3m2t_A Probable dehydrogenase; 32.0 2.1E+02 0.0072 26.5 9.5 110 290-414 7-125 (359)
290 2y0c_A BCEC, UDP-glucose dehyd 31.9 31 0.0011 34.0 3.6 33 6-43 7-39 (478)
291 2pju_A Propionate catabolism o 31.9 43 0.0015 29.1 4.2 29 363-394 64-92 (225)
292 3gg2_A Sugar dehydrogenase, UD 31.8 31 0.0011 33.6 3.6 32 8-44 3-34 (450)
293 2an1_A Putative kinase; struct 31.7 26 0.00088 31.8 2.8 33 358-392 59-95 (292)
294 3dme_A Conserved exported prot 31.7 27 0.00093 32.3 3.1 34 6-44 3-36 (369)
295 3ors_A N5-carboxyaminoimidazol 31.6 60 0.0021 26.5 4.6 31 6-37 2-32 (163)
296 3gem_A Short chain dehydrogena 31.6 37 0.0013 30.1 3.8 34 8-44 27-60 (260)
297 2x4g_A Nucleoside-diphosphate- 31.6 45 0.0015 30.5 4.7 35 6-44 12-46 (342)
298 3r6d_A NAD-dependent epimerase 31.6 52 0.0018 27.9 4.8 33 8-43 5-38 (221)
299 1r8j_A KAIA; circadian clock p 31.6 1.8E+02 0.006 25.9 7.8 63 396-469 158-228 (289)
300 1xmp_A PURE, phosphoribosylami 31.6 2.1E+02 0.0073 23.4 11.7 141 289-453 11-164 (170)
301 3rfo_A Methionyl-tRNA formyltr 31.6 54 0.0018 30.2 5.0 36 6-46 3-38 (317)
302 2hy5_B Intracellular sulfur ox 31.5 49 0.0017 26.1 4.1 36 9-44 7-45 (136)
303 1u7z_A Coenzyme A biosynthesis 31.4 52 0.0018 28.6 4.6 23 22-44 35-57 (226)
304 3awd_A GOX2181, putative polyo 31.4 48 0.0017 28.9 4.6 32 9-43 14-45 (260)
305 3hv2_A Response regulator/HD d 31.3 1.8E+02 0.0061 22.4 8.3 107 301-432 21-133 (153)
306 1gy8_A UDP-galactose 4-epimera 31.2 52 0.0018 30.9 5.1 34 6-43 1-35 (397)
307 3ruf_A WBGU; rossmann fold, UD 31.2 52 0.0018 30.3 5.0 35 6-44 24-58 (351)
308 3ius_A Uncharacterized conserv 31.1 45 0.0015 29.7 4.4 32 8-44 6-37 (286)
309 3g17_A Similar to 2-dehydropan 30.9 14 0.00046 33.7 0.8 32 8-44 3-34 (294)
310 3slg_A PBGP3 protein; structur 30.9 37 0.0013 31.7 3.9 34 7-44 24-58 (372)
311 3m1a_A Putative dehydrogenase; 30.8 54 0.0018 29.2 4.9 34 7-43 4-37 (281)
312 2pk3_A GDP-6-deoxy-D-LYXO-4-he 30.8 43 0.0015 30.4 4.3 33 7-43 12-44 (321)
313 4hkt_A Inositol 2-dehydrogenas 30.8 2.3E+02 0.0079 25.7 9.4 108 290-414 5-120 (331)
314 1tvm_A PTS system, galactitol- 30.7 86 0.0029 23.7 5.3 40 4-43 18-58 (113)
315 3trh_A Phosphoribosylaminoimid 30.7 73 0.0025 26.2 5.0 30 7-37 6-35 (169)
316 2a33_A Hypothetical protein; s 30.6 68 0.0023 27.6 5.2 39 5-43 10-53 (215)
317 3tjr_A Short chain dehydrogena 30.6 63 0.0022 29.2 5.4 32 9-43 32-63 (301)
318 1nff_A Putative oxidoreductase 30.5 88 0.003 27.4 6.3 39 1-43 1-39 (260)
319 1gsa_A Glutathione synthetase; 30.5 38 0.0013 30.6 3.9 37 8-44 2-41 (316)
320 1xgk_A Nitrogen metabolite rep 30.3 47 0.0016 30.9 4.5 34 7-44 5-38 (352)
321 3cg4_A Response regulator rece 30.3 87 0.003 23.8 5.6 39 1-43 1-39 (142)
322 1pjq_A CYSG, siroheme synthase 30.1 1.7E+02 0.0059 28.3 8.7 146 288-451 12-168 (457)
323 2i87_A D-alanine-D-alanine lig 30.0 28 0.00095 32.7 2.9 39 6-44 2-44 (364)
324 2ywx_A Phosphoribosylaminoimid 30.0 64 0.0022 26.1 4.5 29 292-322 2-30 (157)
325 1mio_A Nitrogenase molybdenum 29.9 3.1E+02 0.011 27.2 10.6 35 99-138 446-480 (533)
326 2a5l_A Trp repressor binding p 29.8 70 0.0024 26.6 5.2 37 7-43 5-42 (200)
327 3e18_A Oxidoreductase; dehydro 29.8 3.3E+02 0.011 25.0 11.0 108 290-414 7-122 (359)
328 2ehd_A Oxidoreductase, oxidore 29.6 70 0.0024 27.3 5.3 32 9-43 6-37 (234)
329 3r5x_A D-alanine--D-alanine li 29.6 24 0.00082 32.1 2.3 39 6-44 2-44 (307)
330 4da9_A Short-chain dehydrogena 29.6 64 0.0022 28.8 5.2 33 8-43 29-61 (280)
331 2q62_A ARSH; alpha/beta, flavo 29.4 77 0.0026 27.9 5.5 40 4-43 31-73 (247)
332 1iow_A DD-ligase, DDLB, D-ALA\ 29.4 70 0.0024 28.7 5.5 38 7-44 2-43 (306)
333 2iz1_A 6-phosphogluconate dehy 29.4 30 0.001 34.0 3.0 33 6-43 4-36 (474)
334 2qv7_A Diacylglycerol kinase D 29.4 81 0.0028 29.1 6.0 81 291-392 28-114 (337)
335 2z1m_A GDP-D-mannose dehydrata 29.3 45 0.0016 30.5 4.2 34 7-44 3-36 (345)
336 3ppi_A 3-hydroxyacyl-COA dehyd 29.3 58 0.002 28.9 4.9 33 8-43 30-62 (281)
337 3e1t_A Halogenase; flavoprotei 29.3 24 0.00081 35.0 2.3 39 1-44 1-39 (512)
338 2izz_A Pyrroline-5-carboxylate 29.3 21 0.00071 33.0 1.8 37 3-44 18-58 (322)
339 2pnf_A 3-oxoacyl-[acyl-carrier 29.1 81 0.0028 27.1 5.7 39 1-43 1-39 (248)
340 2f1k_A Prephenate dehydrogenas 29.1 38 0.0013 30.2 3.5 31 8-43 1-31 (279)
341 4dqx_A Probable oxidoreductase 29.1 70 0.0024 28.5 5.3 34 7-43 26-59 (277)
342 3lzw_A Ferredoxin--NADP reduct 29.1 16 0.00054 33.4 1.0 34 7-45 7-40 (332)
343 1e6u_A GDP-fucose synthetase; 29.0 38 0.0013 30.8 3.6 33 7-43 3-35 (321)
344 3qrx_B Melittin; calcium-bindi 29.0 16 0.00056 19.0 0.5 18 373-390 1-18 (26)
345 3e9m_A Oxidoreductase, GFO/IDH 29.0 1.9E+02 0.0067 26.3 8.6 110 290-414 7-124 (330)
346 2pzm_A Putative nucleotide sug 28.9 52 0.0018 30.1 4.6 35 5-43 18-52 (330)
347 1zmt_A Haloalcohol dehalogenas 28.9 48 0.0017 29.0 4.1 33 8-43 1-33 (254)
348 1ihu_A Arsenical pump-driving 28.7 49 0.0017 33.4 4.6 45 1-45 1-46 (589)
349 2aef_A Calcium-gated potassium 28.7 18 0.00062 31.4 1.2 35 3-43 5-39 (234)
350 3db2_A Putative NADPH-dependen 28.6 1.8E+02 0.0062 26.8 8.4 109 290-414 7-123 (354)
351 1e2b_A Enzyme IIB-cellobiose; 28.6 93 0.0032 23.2 5.1 38 7-44 3-40 (106)
352 2q5c_A NTRC family transcripti 28.5 2.4E+02 0.0082 23.6 8.3 29 111-142 142-170 (196)
353 2gkg_A Response regulator homo 28.5 59 0.002 24.0 4.2 46 383-431 79-124 (127)
354 2ahr_A Putative pyrroline carb 28.5 36 0.0012 30.0 3.2 33 6-43 2-34 (259)
355 3foj_A Uncharacterized protein 28.4 93 0.0032 22.5 5.1 35 5-43 54-88 (100)
356 1rkx_A CDP-glucose-4,6-dehydra 28.4 63 0.0021 29.8 5.1 34 6-43 8-41 (357)
357 4fu0_A D-alanine--D-alanine li 28.3 32 0.0011 32.3 2.9 38 6-43 2-43 (357)
358 3ot1_A 4-methyl-5(B-hydroxyeth 28.2 94 0.0032 26.3 5.8 36 8-44 10-45 (208)
359 3nbm_A PTS system, lactose-spe 28.2 53 0.0018 24.8 3.6 39 4-42 3-41 (108)
360 3tox_A Short chain dehydrogena 28.2 55 0.0019 29.3 4.5 34 7-43 7-40 (280)
361 4hcj_A THIJ/PFPI domain protei 28.2 95 0.0032 25.6 5.6 40 4-44 4-44 (177)
362 2pd6_A Estradiol 17-beta-dehyd 28.1 1.1E+02 0.0037 26.6 6.5 39 1-43 1-39 (264)
363 3ai3_A NADPH-sorbose reductase 28.0 1.1E+02 0.0038 26.7 6.5 39 1-43 1-39 (263)
364 3eod_A Protein HNR; response r 28.0 1.2E+02 0.004 22.6 5.9 39 1-43 1-39 (130)
365 2dkn_A 3-alpha-hydroxysteroid 28.0 68 0.0023 27.7 5.0 33 8-43 1-33 (255)
366 3d1l_A Putative NADP oxidoredu 28.0 23 0.00079 31.5 1.8 33 6-43 9-42 (266)
367 3sbx_A Putative uncharacterize 28.0 79 0.0027 26.6 5.0 37 6-43 12-52 (189)
368 1yt5_A Inorganic polyphosphate 28.0 20 0.00067 32.0 1.3 53 362-432 41-96 (258)
369 2xdo_A TETX2 protein; tetracyc 27.9 45 0.0015 31.6 4.0 34 6-44 25-58 (398)
370 1u11_A PURE (N5-carboxyaminoim 27.9 74 0.0025 26.5 4.6 31 6-37 20-50 (182)
371 2hqm_A GR, grase, glutathione 27.9 30 0.001 34.0 2.7 39 1-44 5-43 (479)
372 3ia7_A CALG4; glycosysltransfe 27.9 1.3E+02 0.0043 28.1 7.2 35 290-326 6-40 (402)
373 1udb_A Epimerase, UDP-galactos 27.8 61 0.0021 29.6 4.8 31 8-42 1-31 (338)
374 3pdu_A 3-hydroxyisobutyrate de 27.8 37 0.0013 30.6 3.2 31 8-43 2-32 (287)
375 2bon_A Lipid kinase; DAG kinas 27.8 1.3E+02 0.0045 27.6 7.1 82 288-393 30-119 (332)
376 3m6m_D Sensory/regulatory prot 27.7 70 0.0024 24.7 4.6 41 99-141 48-99 (143)
377 4hv4_A UDP-N-acetylmuramate--L 27.7 65 0.0022 31.7 5.2 34 6-43 21-54 (494)
378 3oh8_A Nucleoside-diphosphate 27.6 54 0.0019 32.4 4.7 34 7-44 147-180 (516)
379 3lyh_A Cobalamin (vitamin B12) 27.4 2E+02 0.0069 21.8 9.4 37 288-324 5-41 (126)
380 2c29_D Dihydroflavonol 4-reduc 27.4 55 0.0019 29.9 4.4 31 10-43 7-37 (337)
381 3i6i_A Putative leucoanthocyan 27.4 61 0.0021 29.8 4.8 36 6-45 9-44 (346)
382 1ny5_A Transcriptional regulat 27.3 3.9E+02 0.013 25.0 11.0 49 382-432 70-118 (387)
383 2f00_A UDP-N-acetylmuramate--L 27.2 86 0.003 30.8 6.0 36 4-43 16-51 (491)
384 3c85_A Putative glutathione-re 27.1 31 0.0011 28.5 2.4 34 6-44 38-72 (183)
385 2zbw_A Thioredoxin reductase; 27.1 34 0.0012 31.3 2.9 36 5-45 3-38 (335)
386 3ka7_A Oxidoreductase; structu 27.1 38 0.0013 32.3 3.3 32 8-44 1-32 (425)
387 1rtt_A Conserved hypothetical 27.0 35 0.0012 28.5 2.7 39 4-43 3-44 (193)
388 2z1n_A Dehydrogenase; reductas 26.9 1.2E+02 0.0041 26.5 6.5 32 9-43 8-39 (260)
389 3f6r_A Flavodoxin; FMN binding 26.9 72 0.0025 25.1 4.5 37 8-44 2-39 (148)
390 3nhm_A Response regulator; pro 26.8 1.9E+02 0.0066 21.3 7.4 46 384-432 77-122 (133)
391 1eiw_A Hypothetical protein MT 26.8 69 0.0023 24.3 4.0 64 361-431 37-109 (111)
392 3hn7_A UDP-N-acetylmuramate-L- 26.8 55 0.0019 32.6 4.5 35 6-44 18-52 (524)
393 3kht_A Response regulator; PSI 26.7 2.1E+02 0.0071 21.6 8.5 47 383-431 80-127 (144)
394 3sxp_A ADP-L-glycero-D-mannohe 26.6 1E+02 0.0036 28.4 6.3 35 5-43 8-44 (362)
395 1z7e_A Protein aRNA; rossmann 26.6 1.1E+02 0.0038 31.2 7.0 39 101-141 67-106 (660)
396 3lyu_A Putative hydrogenase; t 26.6 45 0.0016 26.4 3.2 37 7-46 18-54 (142)
397 3tla_A MCCF; serine protease, 26.5 60 0.002 30.6 4.4 73 302-392 93-167 (371)
398 3end_A Light-independent proto 26.5 68 0.0023 29.0 4.8 39 7-45 40-79 (307)
399 2xj4_A MIPZ; replication, cell 26.5 70 0.0024 28.7 4.8 38 8-45 4-43 (286)
400 1lld_A L-lactate dehydrogenase 26.4 37 0.0013 31.1 3.0 35 5-44 5-41 (319)
401 3d3w_A L-xylulose reductase; u 26.4 1.3E+02 0.0043 25.8 6.5 39 1-43 1-39 (244)
402 1ydh_A AT5G11950; structural g 26.4 86 0.0029 27.0 5.1 39 5-43 6-49 (216)
403 2e1m_A L-glutamate oxidase; L- 26.4 91 0.0031 29.4 5.7 36 4-44 41-76 (376)
404 3alj_A 2-methyl-3-hydroxypyrid 26.4 45 0.0015 31.3 3.6 34 6-44 10-43 (379)
405 3t6k_A Response regulator rece 26.3 1E+02 0.0035 23.4 5.3 32 111-142 48-88 (136)
406 2zay_A Response regulator rece 26.3 2.1E+02 0.0072 21.6 7.3 47 383-431 81-127 (147)
407 1vpd_A Tartronate semialdehyde 26.1 65 0.0022 29.0 4.6 31 8-43 6-36 (299)
408 1vi6_A 30S ribosomal protein S 26.1 56 0.0019 27.9 3.8 31 111-141 115-147 (208)
409 2vrn_A Protease I, DR1199; cys 26.0 1.5E+02 0.005 24.4 6.5 39 5-44 7-45 (190)
410 3rp8_A Flavoprotein monooxygen 26.0 45 0.0015 31.6 3.6 36 4-44 20-55 (407)
411 3gvc_A Oxidoreductase, probabl 26.0 89 0.003 27.8 5.4 33 8-43 29-61 (277)
412 3nrc_A Enoyl-[acyl-carrier-pro 25.8 1E+02 0.0036 27.3 5.9 35 9-45 27-62 (280)
413 3o26_A Salutaridine reductase; 25.8 69 0.0024 28.7 4.8 34 7-43 11-44 (311)
414 3o1l_A Formyltetrahydrofolate 25.8 3.7E+02 0.013 24.3 11.1 105 6-141 104-212 (302)
415 2ptg_A Enoyl-acyl carrier redu 25.8 1.1E+02 0.0037 27.8 6.1 33 8-42 9-42 (319)
416 3d4o_A Dipicolinate synthase s 25.8 81 0.0028 28.4 5.2 34 4-42 2-35 (293)
417 2jae_A L-amino acid oxidase; o 25.7 56 0.0019 31.9 4.3 36 4-44 8-43 (489)
418 4gwg_A 6-phosphogluconate dehy 25.7 37 0.0013 33.4 2.9 33 6-43 3-35 (484)
419 2vou_A 2,6-dihydroxypyridine h 25.6 54 0.0018 31.0 4.1 35 5-44 3-37 (397)
420 2wm1_A 2-amino-3-carboxymucona 25.6 89 0.003 28.6 5.5 47 277-326 127-176 (336)
421 3pdi_B Nitrogenase MOFE cofact 25.6 54 0.0019 32.0 4.1 33 101-138 367-399 (458)
422 1sb8_A WBPP; epimerase, 4-epim 25.5 76 0.0026 29.2 5.0 33 7-43 27-59 (352)
423 2ew8_A (S)-1-phenylethanol deh 25.5 1.2E+02 0.004 26.3 6.1 33 9-44 8-40 (249)
424 3rc1_A Sugar 3-ketoreductase; 25.4 1.8E+02 0.0063 26.7 7.7 110 290-414 29-146 (350)
425 4dad_A Putative pilus assembly 25.4 2.2E+02 0.0075 21.5 8.7 107 302-431 28-140 (146)
426 1n7h_A GDP-D-mannose-4,6-dehyd 25.4 59 0.002 30.4 4.3 32 9-44 30-61 (381)
427 1zem_A Xylitol dehydrogenase; 25.3 1.2E+02 0.004 26.6 6.1 32 9-43 8-39 (262)
428 3rkr_A Short chain oxidoreduct 25.3 90 0.0031 27.4 5.3 32 9-43 30-61 (262)
429 4b4k_A N5-carboxyaminoimidazol 25.3 81 0.0028 26.2 4.4 52 1-53 14-69 (181)
430 3hly_A Flavodoxin-like domain; 25.2 90 0.0031 25.1 4.9 37 8-44 1-38 (161)
431 3nrn_A Uncharacterized protein 25.2 46 0.0016 31.7 3.5 31 8-43 1-31 (421)
432 3itj_A Thioredoxin reductase 1 25.1 31 0.0011 31.5 2.2 35 5-44 20-54 (338)
433 3kbq_A Protein TA0487; structu 25.1 1.5E+02 0.0051 24.4 6.1 82 291-392 6-97 (172)
434 4iin_A 3-ketoacyl-acyl carrier 25.0 99 0.0034 27.3 5.5 33 8-43 29-61 (271)
435 4e5v_A Putative THUA-like prot 24.9 74 0.0025 28.7 4.6 38 6-44 3-43 (281)
436 1kyq_A Met8P, siroheme biosynt 24.9 52 0.0018 29.6 3.5 35 6-45 12-46 (274)
437 3sju_A Keto reductase; short-c 24.8 71 0.0024 28.5 4.5 34 7-43 23-56 (279)
438 1o4v_A Phosphoribosylaminoimid 24.8 1.9E+02 0.0065 24.0 6.5 66 372-447 105-173 (183)
439 3f67_A Putative dienelactone h 24.8 89 0.003 26.2 5.1 36 8-43 32-67 (241)
440 3k30_A Histamine dehydrogenase 24.8 47 0.0016 34.3 3.7 35 5-44 389-423 (690)
441 3jte_A Response regulator rece 24.7 2.2E+02 0.0076 21.3 9.2 48 383-432 76-123 (143)
442 1fy2_A Aspartyl dipeptidase; s 24.7 1.5E+02 0.0051 25.6 6.4 46 277-324 22-67 (229)
443 1yqg_A Pyrroline-5-carboxylate 24.7 32 0.0011 30.4 2.1 31 8-43 1-32 (263)
444 3hdv_A Response regulator; PSI 24.6 1.1E+02 0.0036 23.1 5.1 39 1-43 1-39 (136)
445 2rcy_A Pyrroline carboxylate r 24.6 28 0.00095 30.8 1.7 32 7-43 4-39 (262)
446 1xrs_B D-lysine 5,6-aminomutas 24.5 42 0.0014 29.9 2.8 48 6-53 119-175 (262)
447 1pno_A NAD(P) transhydrogenase 24.4 78 0.0027 25.9 4.0 37 7-45 23-64 (180)
448 3k5i_A Phosphoribosyl-aminoimi 24.4 93 0.0032 29.6 5.5 37 1-42 18-54 (403)
449 1rw7_A YDR533CP; alpha-beta sa 24.3 1.4E+02 0.0047 26.0 6.2 38 8-45 4-52 (243)
450 2o2s_A Enoyl-acyl carrier redu 24.2 1.1E+02 0.0036 27.8 5.7 33 8-42 9-42 (315)
451 3f8d_A Thioredoxin reductase ( 24.2 41 0.0014 30.3 2.9 32 8-44 16-47 (323)
452 3evn_A Oxidoreductase, GFO/IDH 24.2 3.2E+02 0.011 24.7 9.1 109 290-414 7-124 (329)
453 3eme_A Rhodanese-like domain p 24.1 95 0.0033 22.6 4.4 35 5-43 54-88 (103)
454 3cg0_A Response regulator rece 24.1 2.2E+02 0.0077 21.1 8.8 108 302-432 17-128 (140)
455 3l18_A Intracellular protease 24.1 1.6E+02 0.0054 23.6 6.3 38 6-44 1-38 (168)
456 3bch_A 40S ribosomal protein S 24.1 65 0.0022 28.4 3.9 31 111-141 151-183 (253)
457 1d4o_A NADP(H) transhydrogenas 24.0 79 0.0027 25.9 4.0 39 7-45 22-63 (184)
458 1xv5_A AGT, DNA alpha-glucosyl 24.0 1E+02 0.0035 26.2 4.8 37 7-43 1-40 (401)
459 3moi_A Probable dehydrogenase; 23.9 2.8E+02 0.0094 25.9 8.8 108 291-414 5-121 (387)
460 3pnx_A Putative sulfurtransfer 23.9 1.1E+02 0.0038 24.8 5.0 36 10-45 8-43 (160)
461 1wma_A Carbonyl reductase [NAD 23.9 86 0.0029 27.4 4.9 34 7-43 3-37 (276)
462 3h7a_A Short chain dehydrogena 23.7 1.3E+02 0.0043 26.3 5.9 33 8-43 7-39 (252)
463 2rh8_A Anthocyanidin reductase 23.6 51 0.0017 30.2 3.4 32 8-43 10-41 (338)
464 3ktd_A Prephenate dehydrogenas 23.6 50 0.0017 30.8 3.3 38 1-43 2-39 (341)
465 3sc4_A Short chain dehydrogena 23.5 90 0.0031 27.9 5.0 35 7-44 8-42 (285)
466 1oi4_A Hypothetical protein YH 23.4 1.7E+02 0.0059 24.2 6.5 40 5-45 21-60 (193)
467 1spx_A Short-chain reductase f 23.4 1.2E+02 0.0041 26.7 5.8 32 9-43 7-38 (278)
468 3fni_A Putative diflavin flavo 23.4 1.6E+02 0.0055 23.5 6.1 39 6-44 3-42 (159)
469 3v2g_A 3-oxoacyl-[acyl-carrier 23.3 84 0.0029 27.9 4.7 33 8-43 31-63 (271)
470 3h1g_A Chemotaxis protein CHEY 23.2 2.3E+02 0.0078 20.9 11.1 46 384-431 81-126 (129)
471 3l6e_A Oxidoreductase, short-c 23.2 86 0.0029 27.0 4.6 33 8-43 3-35 (235)
472 3ga2_A Endonuclease V; alpha-b 23.1 82 0.0028 27.6 4.3 41 99-139 97-144 (246)
473 2dtx_A Glucose 1-dehydrogenase 23.0 93 0.0032 27.4 4.9 32 9-43 9-40 (264)
474 2b9w_A Putative aminooxidase; 23.0 90 0.0031 29.6 5.2 34 5-43 4-38 (424)
475 1rpn_A GDP-mannose 4,6-dehydra 23.0 73 0.0025 29.0 4.4 35 6-44 13-47 (335)
476 3ea0_A ATPase, para family; al 23.0 79 0.0027 27.2 4.4 41 6-46 2-45 (245)
477 3gt7_A Sensor protein; structu 23.0 1.3E+02 0.0043 23.4 5.4 39 1-43 1-39 (154)
478 3nrb_A Formyltetrahydrofolate 22.9 3.9E+02 0.013 23.9 9.0 108 6-141 87-196 (287)
479 3kkj_A Amine oxidase, flavin-c 22.9 43 0.0015 28.9 2.7 29 10-43 5-33 (336)
480 1wcv_1 SOJ, segregation protei 22.9 66 0.0023 28.2 3.9 41 6-46 4-46 (257)
481 3ak4_A NADH-dependent quinucli 22.9 94 0.0032 27.2 4.9 32 9-43 13-44 (263)
482 3rft_A Uronate dehydrogenase; 22.8 43 0.0015 29.6 2.6 34 8-44 3-36 (267)
483 1f4p_A Flavodoxin; electron tr 22.8 75 0.0026 24.9 3.9 36 8-43 1-37 (147)
484 1q74_A 1D-MYO-inosityl 2-aceta 22.8 98 0.0034 28.1 5.1 37 6-43 3-40 (303)
485 3f1l_A Uncharacterized oxidore 22.7 1.2E+02 0.0042 26.3 5.7 33 8-43 12-44 (252)
486 3trh_A Phosphoribosylaminoimid 22.7 3.2E+02 0.011 22.4 9.4 139 290-451 7-157 (169)
487 2qvg_A Two component response 22.7 77 0.0026 24.2 3.9 39 1-43 1-41 (143)
488 3ucx_A Short chain dehydrogena 22.7 1.2E+02 0.004 26.6 5.6 32 9-43 12-43 (264)
489 3dfz_A SIRC, precorrin-2 dehyd 22.7 1E+02 0.0035 26.6 4.9 36 5-45 29-64 (223)
490 3oid_A Enoyl-[acyl-carrier-pro 22.6 1.5E+02 0.005 25.9 6.2 33 8-43 4-36 (258)
491 1q6z_A BFD, BFDC, benzoylforma 22.6 2.1E+02 0.0071 28.2 7.9 24 367-390 66-95 (528)
492 4fs3_A Enoyl-[acyl-carrier-pro 22.5 77 0.0026 27.8 4.2 34 9-43 7-40 (256)
493 1oc2_A DTDP-glucose 4,6-dehydr 22.4 61 0.0021 29.7 3.7 32 8-43 5-38 (348)
494 4hs4_A Chromate reductase; tri 22.4 48 0.0016 28.1 2.7 38 1-39 1-40 (199)
495 1xx6_A Thymidine kinase; NESG, 22.3 1.3E+02 0.0046 25.1 5.5 44 1-44 1-45 (191)
496 2rjn_A Response regulator rece 22.3 1.5E+02 0.0052 22.8 5.7 39 1-43 1-39 (154)
497 3afn_B Carbonyl reductase; alp 22.3 71 0.0024 27.7 4.0 33 9-44 8-40 (258)
498 1pgj_A 6PGDH, 6-PGDH, 6-phosph 22.3 36 0.0012 33.5 2.1 31 8-43 2-32 (478)
499 3f6p_A Transcriptional regulat 22.2 2.3E+02 0.0078 20.6 7.2 46 384-431 73-118 (120)
500 2yjz_A Metalloreductase steap4 27.6 19 0.00065 30.7 0.0 33 6-43 18-50 (201)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=5.9e-68 Score=529.26 Aligned_cols=433 Identities=24% Similarity=0.447 Sum_probs=348.1
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCC--CEEEEEeCCcchhhhhhcccccccccCCCCeeEEecCCCCCCCCCCCC
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFGLAG--LKVTFLNSKHNHERLIRYTDIHDRFLQYSEFQFKTISDGLPADHPRAG 83 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~~rG--H~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~ 83 (476)
+++||+++|+|++||++||+.||+.|++|| +.|||++++.+..++.+... ...+.++|..++++++++... .
T Consensus 12 ~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~-----~~~~~i~~~~ipdglp~~~~~-~ 85 (454)
T 3hbf_A 12 NLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSN-----EFLPNIKYYNVHDGLPKGYVS-S 85 (454)
T ss_dssp CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSS-----CCCTTEEEEECCCCCCTTCCC-C
T ss_pred CCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccc-----cCCCCceEEecCCCCCCCccc-c
Confidence 468999999999999999999999999999 99999999766665533321 113469999999998875322 2
Q ss_pred CcHHH----HHHHHHhhchHHHHHHHhcCCCCceEEEECCCcchHHHHHHHcCCCeEEEecCchHHHHHHHhhhHHHhhC
Q 011832 84 DQLME----MFDSLSLNTRPLLKQMLIDTSPPVSCIIGDACMEFVVDVATELEIPVIHFRAISACSFWAYFSIPEMIQAG 159 (476)
Q Consensus 84 ~~~~~----~~~~~~~~~~~~l~~ll~~~~~~~DlvI~D~~~~~~~~vA~~l~iP~i~~~~~~~~~~~~~~~~~~~~~~~ 159 (476)
.+... ++......+.+.+++++++...++||||+|.+..|+..+|+++|||++.|++++++.++.+.+.+......
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~ 165 (454)
T 3hbf_A 86 GNPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKT 165 (454)
T ss_dssp SCTTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTC
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhc
Confidence 22222 33333333345555555543458999999999999999999999999999999999998887765433221
Q ss_pred CCCCCcCCccccccccccCCCCcccccCCCCCccccCCCCchHHHHHHHHhhcCCCCcEEEEcchhhcchHHHHHHHhhC
Q 011832 160 ELPMKAYDEDMDRLITKVPGMETFLRFRDLPSFCRVSDVTDRDLQVLKNATQQSPRAHALILNTFEDLEEPILSHIRTKC 239 (476)
Q Consensus 160 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~l~~~~~~~ 239 (476)
..... . ......++|+++. ++.++++.+... .....+.+...+..+....++.+++||+++||++.++++++.+
T Consensus 166 ~~~~~--~--~~~~~~~iPg~p~-~~~~dlp~~~~~-~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~ 239 (454)
T 3hbf_A 166 GSKEV--H--DVKSIDVLPGFPE-LKASDLPEGVIK-DIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKF 239 (454)
T ss_dssp CHHHH--T--TSSCBCCSTTSCC-BCGGGSCTTSSS-CTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTTS
T ss_pred CCCcc--c--cccccccCCCCCC-cChhhCchhhcc-CCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhcC
Confidence 00000 0 0112345788876 788888776553 3344556666666777788999999999999999999999999
Q ss_pred CCeeeeCCCcccccccccccccccccccccCCccccchhhhhhhcCCCCCeEEEEEeccccccCHHHHHHHHHHHHhcCC
Q 011832 240 PKVYTIGPLHLQLKTRFASNMISSSSQKSLNSLWEVDRSCIEWLGKQPVRSVLYVSFGSITLLKREQLIEFWHGLVDSKQ 319 (476)
Q Consensus 240 p~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~Gs~~~~~~~~~~~~~~a~~~~~~ 319 (476)
|++++|||++...... .+..+.++.+||+.++++++|||||||....+.+++.+++.+++..+.
T Consensus 240 ~~v~~vGPl~~~~~~~----------------~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~ 303 (454)
T 3hbf_A 240 KLLLNVGPFNLTTPQR----------------KVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGF 303 (454)
T ss_dssp SCEEECCCHHHHSCCS----------------CCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCC
T ss_pred CCEEEECCcccccccc----------------cccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCC
Confidence 9999999998754321 012356799999998888999999999998889999999999999999
Q ss_pred ceEEEECCCCCCCchhhH-HHHHHhhcCCceEeeccChHHHhhcccccccccccCchhHHHHHhhCCceeccCCcccchh
Q 011832 320 RFLWVIRPDSVIGEGDAL-AELVEGTKERGLLVSWVPQEEVLAHQAVAGFLTHSGWNSTLESIVAGVPMICWPYFADQQI 398 (476)
Q Consensus 320 ~~i~~~~~~~~~~~~~~l-~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HGG~~s~~eal~~GvP~l~iP~~~DQ~~ 398 (476)
+|||+++.+. ...+ ++|.+++++|+++++|+||.+||+|+++++||||||+||+.|++++|||+|++|+++||+.
T Consensus 304 ~flw~~~~~~----~~~lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~ 379 (454)
T 3hbf_A 304 PFIWSFRGDP----KEKLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGL 379 (454)
T ss_dssp CEEEECCSCH----HHHSCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHH
T ss_pred eEEEEeCCcc----hhcCCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHH
Confidence 9999998652 1234 5777788999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHhhhcceeeccc-ccCHHHHHHHHHHHHhH-hHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 011832 399 NSRFVSEVWNLGLDMKD-VCDRNVVEKMVNDLMVE-RKEEFMRAADRMATMARTTANEGGPSYCNLDRLIDDIK 470 (476)
Q Consensus 399 na~~v~~~~G~G~~~~~-~~~~~~l~~~i~~~l~~-~~~~y~~~a~~~~~~~~~~~~~~g~~~~~~~~~i~~~~ 470 (476)
||+++++.+|+|+.++. .+++++|.++|+++|++ ++++||+||+++++++++++++|||+++++++|++.|.
T Consensus 380 Na~~v~~~~g~Gv~l~~~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 380 NTILTESVLEIGVGVDNGVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp HHHHHHTTSCSEEECGGGSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred HHHHHHHhhCeeEEecCCCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 99999443699999985 89999999999999984 45589999999999999999999999999999999874
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=2.2e-66 Score=528.30 Aligned_cols=458 Identities=34% Similarity=0.724 Sum_probs=343.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhcccccccccCCCCeeEEecCCCCCCCC--CCC
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHERLIRYTDIHDRFLQYSEFQFKTISDGLPADH--PRA 82 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~--~~~ 82 (476)
++++||+++|++++||++|++.||++|++|||+|||++++.+...+.+.... ......+.+++..++++++... ...
T Consensus 6 ~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~-~~~~~~~~i~~~~l~~~lp~~~~~~~~ 84 (482)
T 2pq6_A 6 NRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGP-KAFDGFTDFNFESIPDGLTPMEGDGDV 84 (482)
T ss_dssp --CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC-------------CEEEEEECCCCC--------
T ss_pred CCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhcccccc-ccccCCCceEEEECCCCCCCcccccCc
Confidence 4568999999999999999999999999999999999997766655443110 0001113589999987776521 122
Q ss_pred CCcHHHHHHHHHhhchHHHHHHHhcC-----CCCceEEEECCCcchHHHHHHHcCCCeEEEecCchHHHHHHHhhhHHHh
Q 011832 83 GDQLMEMFDSLSLNTRPLLKQMLIDT-----SPPVSCIIGDACMEFVVDVATELEIPVIHFRAISACSFWAYFSIPEMIQ 157 (476)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~~ll~~~-----~~~~DlvI~D~~~~~~~~vA~~l~iP~i~~~~~~~~~~~~~~~~~~~~~ 157 (476)
..+...++..+...+.+.++++++.. ..+||+||+|.++.|+..+|+++|||++.++++++.....+..++.+..
T Consensus 85 ~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~ 164 (482)
T 2pq6_A 85 SQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVE 164 (482)
T ss_dssp -CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHHH
T ss_pred chhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHHHh
Confidence 23455566666567788888888742 2589999999999999999999999999999999887777666666666
Q ss_pred hCCCCCCcCCccc------cccccccCCCCcccccCCCCCccccCCCCchHHHHHHHHhhcCCCCcEEEEcchhhcchHH
Q 011832 158 AGELPMKAYDEDM------DRLITKVPGMETFLRFRDLPSFCRVSDVTDRDLQVLKNATQQSPRAHALILNTFEDLEEPI 231 (476)
Q Consensus 158 ~~~~p~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~ 231 (476)
.++.|.. ...+ .....+++++.. ++...++.+.......+...+...+..+...+++++|+||+++||++.
T Consensus 165 ~~~~p~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~ 241 (482)
T 2pq6_A 165 RGIIPFK--DESYLTNGCLETKVDWIPGLKN-FRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDV 241 (482)
T ss_dssp TTCSSCS--SGGGGTSSGGGCBCCSSTTCCS-CBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHH
T ss_pred cCCCCCc--cccccccccccCccccCCCCCC-CchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHHH
Confidence 6777754 2211 111223444433 334444433332222334444444556677889999999999999999
Q ss_pred HHHHHhhCCCeeeeCCCccc-ccccccccccccccccccCCccccchhhhhhhcCCCCCeEEEEEeccccccCHHHHHHH
Q 011832 232 LSHIRTKCPKVYTIGPLHLQ-LKTRFASNMISSSSQKSLNSLWEVDRSCIEWLGKQPVRSVLYVSFGSITLLKREQLIEF 310 (476)
Q Consensus 232 l~~~~~~~p~~~~vG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~Gs~~~~~~~~~~~~ 310 (476)
++++++.+|++++|||++.. +...... ..++...++|+.+.++.+||++++++++|||||||....+.+++.++
T Consensus 242 ~~~~~~~~~~v~~VGPl~~~~~~~~~~~-----~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~ 316 (482)
T 2pq6_A 242 INALSSTIPSIYPIGPLPSLLKQTPQIH-----QLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEF 316 (482)
T ss_dssp HHHHHTTCTTEEECCCHHHHHHTSTTGG-----GGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHH
T ss_pred HHHHHHhCCcEEEEcCCccccccccccc-----ccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHH
Confidence 99999988999999999864 2110000 00000013445566789999988788999999999987788889999
Q ss_pred HHHHHhcCCceEEEECCCCCCCchhhH-HHHHHhhcCCceEeeccChHHHhhcccccccccccCchhHHHHHhhCCceec
Q 011832 311 WHGLVDSKQRFLWVIRPDSVIGEGDAL-AELVEGTKERGLLVSWVPQEEVLAHQAVAGFLTHSGWNSTLESIVAGVPMIC 389 (476)
Q Consensus 311 ~~a~~~~~~~~i~~~~~~~~~~~~~~l-~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HGG~~s~~eal~~GvP~l~ 389 (476)
+.+|+..+.+|||+++.+...+....+ +++.+++++|+++++|+||.++|+|+++++||||||+||+.||+++|||+|+
T Consensus 317 ~~~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~ 396 (482)
T 2pq6_A 317 AWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLC 396 (482)
T ss_dssp HHHHHHTTCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEE
T ss_pred HHHHHhcCCcEEEEEcCCccccccccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEe
Confidence 999999999999999754211111124 6777788999999999999999999999999999999999999999999999
Q ss_pred cCCcccchhhHHHHHhhhcceeecccccCHHHHHHHHHHHHhH-hHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 011832 390 WPYFADQQINSRFVSEVWNLGLDMKDVCDRNVVEKMVNDLMVE-RKEEFMRAADRMATMARTTANEGGPSYCNLDRLIDD 468 (476)
Q Consensus 390 iP~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~l~~~i~~~l~~-~~~~y~~~a~~~~~~~~~~~~~~g~~~~~~~~~i~~ 468 (476)
+|+++||+.||+++++++|+|+.+++.+++++|.++|+++|++ ++.+||+||+++++++++++.+||++.+++++|++.
T Consensus 397 ~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~ 476 (482)
T 2pq6_A 397 WPFFADQPTDCRFICNEWEIGMEIDTNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKD 476 (482)
T ss_dssp CCCSTTHHHHHHHHHHTSCCEEECCSSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHH
T ss_pred cCcccchHHHHHHHHHHhCEEEEECCCCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence 9999999999999955789999998779999999999999985 233799999999999999999999999999999998
Q ss_pred HHh
Q 011832 469 IKM 471 (476)
Q Consensus 469 ~~~ 471 (476)
+..
T Consensus 477 ~~~ 479 (482)
T 2pq6_A 477 VLL 479 (482)
T ss_dssp TTC
T ss_pred HHh
Confidence 754
No 3
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=6e-62 Score=490.88 Aligned_cols=442 Identities=26% Similarity=0.494 Sum_probs=322.3
Q ss_pred CCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCE--EEEEeCCcchhhhhhcccccccccCCCCeeEEecCCCCCCC
Q 011832 1 MEEKPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLK--VTFLNSKHNHERLIRYTDIHDRFLQYSEFQFKTISDGLPAD 78 (476)
Q Consensus 1 ~~~~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~--Vt~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~ 78 (476)
|+.+.+++||+++|+|++||++|+++||+.|++|||+ ||+++++.+...+.+... . ...+.+++..++++++++
T Consensus 1 m~~~~~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~--~--~~~~~i~~~~i~~glp~~ 76 (456)
T 2c1x_A 1 MSQTTTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSM--H--TMQCNIKSYDISDGVPEG 76 (456)
T ss_dssp ------CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC-----------CTTEEEEECCCCCCTT
T ss_pred CCCCCCCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhcccc--c--cCCCceEEEeCCCCCCCc
Confidence 7777788999999999999999999999999999765 577888654444332211 0 002358999998877764
Q ss_pred CCCCCCcHHHHHHHHHhhch----HHHHHHHhcCCCCceEEEECCCcchHHHHHHHcCCCeEEEecCchHHHHHHHhhhH
Q 011832 79 HPRAGDQLMEMFDSLSLNTR----PLLKQMLIDTSPPVSCIIGDACMEFVVDVATELEIPVIHFRAISACSFWAYFSIPE 154 (476)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~----~~l~~ll~~~~~~~DlvI~D~~~~~~~~vA~~l~iP~i~~~~~~~~~~~~~~~~~~ 154 (476)
.. ........+..+...+. ..+.+++++...+||+||+|.++.|+..+|+++|||++.+++++++.+..+.+.+.
T Consensus 77 ~~-~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~ 155 (456)
T 2c1x_A 77 YV-FAGRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDE 155 (456)
T ss_dssp CC-CCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHH
T ss_pred cc-ccCChHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHH
Confidence 21 11122222222323333 33444443323589999999999999999999999999999998877765544332
Q ss_pred HHhh-CCCCCCcCCccccccccccCCCCcccccCCCCCccccCCCCchHHHHHHHHhhcCCCCcEEEEcchhhcchHHHH
Q 011832 155 MIQA-GELPMKAYDEDMDRLITKVPGMETFLRFRDLPSFCRVSDVTDRDLQVLKNATQQSPRAHALILNTFEDLEEPILS 233 (476)
Q Consensus 155 ~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~l~ 233 (476)
.... +..+. .........++|++.. ++.+.++.............+...+..+...+++.+++||+++||++.++
T Consensus 156 ~~~~~~~~~~---~~~~~~~~~~~pg~~~-~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~ 231 (456)
T 2c1x_A 156 IREKIGVSGI---QGREDELLNFIPGMSK-VRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTN 231 (456)
T ss_dssp HHHHHCSSCC---TTCTTCBCTTSTTCTT-CBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHH
T ss_pred HHhccCCccc---ccccccccccCCCCCc-ccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHH
Confidence 2111 21110 0111112334666655 55555554332222222333334444455578899999999999999999
Q ss_pred HHHhhCCCeeeeCCCcccccccccccccccccccccCCccccchhhhhhhcCCCCCeEEEEEeccccccCHHHHHHHHHH
Q 011832 234 HIRTKCPKVYTIGPLHLQLKTRFASNMISSSSQKSLNSLWEVDRSCIEWLGKQPVRSVLYVSFGSITLLKREQLIEFWHG 313 (476)
Q Consensus 234 ~~~~~~p~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~Gs~~~~~~~~~~~~~~a 313 (476)
.+++.+|++++|||++...... + |..+.++.+|++.++++++|||||||....+.+++.+++.+
T Consensus 232 ~~~~~~~~~~~vGpl~~~~~~~--------~--------~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~ 295 (456)
T 2c1x_A 232 DLKSKLKTYLNIGPFNLITPPP--------V--------VPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEA 295 (456)
T ss_dssp HHHHHSSCEEECCCHHHHC-------------------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHH
T ss_pred HHHhcCCCEEEecCcccCcccc--------c--------ccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHH
Confidence 9999999999999998643210 0 11245688999988788999999999987788899999999
Q ss_pred HHhcCCceEEEECCCCCCCchhhH-HHHHHhhcCCceEeeccChHHHhhcccccccccccCchhHHHHHhhCCceeccCC
Q 011832 314 LVDSKQRFLWVIRPDSVIGEGDAL-AELVEGTKERGLLVSWVPQEEVLAHQAVAGFLTHSGWNSTLESIVAGVPMICWPY 392 (476)
Q Consensus 314 ~~~~~~~~i~~~~~~~~~~~~~~l-~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HGG~~s~~eal~~GvP~l~iP~ 392 (476)
++..+.+|||+++.+.. ..+ ++|.+++++|+++++|+||.++|+|+++++||||||+||+.||+++|||+|++|+
T Consensus 296 l~~~~~~~lw~~~~~~~----~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~ 371 (456)
T 2c1x_A 296 LEASRVPFIWSLRDKAR----VHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPF 371 (456)
T ss_dssp HHHHTCCEEEECCGGGG----GGSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCC
T ss_pred HHhcCCeEEEEECCcch----hhCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCC
Confidence 99999999999975421 123 5666677899999999999999999999999999999999999999999999999
Q ss_pred cccchhhHHHHHhhhcceeeccc-ccCHHHHHHHHHHHHhH-hHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 011832 393 FADQQINSRFVSEVWNLGLDMKD-VCDRNVVEKMVNDLMVE-RKEEFMRAADRMATMARTTANEGGPSYCNLDRLIDDIK 470 (476)
Q Consensus 393 ~~DQ~~na~~v~~~~G~G~~~~~-~~~~~~l~~~i~~~l~~-~~~~y~~~a~~~~~~~~~~~~~~g~~~~~~~~~i~~~~ 470 (476)
++||+.||+++++.+|+|+.++. .+++++|.++|+++|++ ++++||+||+++++++++++++||+|.+++++|++.+.
T Consensus 372 ~~dQ~~Na~~l~~~~g~g~~l~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~ 451 (456)
T 2c1x_A 372 FGDQRLNGRMVEDVLEIGVRIEGGVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVS 451 (456)
T ss_dssp STTHHHHHHHHHHTSCCEEECGGGSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHT
T ss_pred hhhHHHHHHHHHHHhCeEEEecCCCcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHH
Confidence 99999999999443499999984 79999999999999985 34489999999999999999999999999999999885
Q ss_pred h
Q 011832 471 M 471 (476)
Q Consensus 471 ~ 471 (476)
+
T Consensus 452 ~ 452 (456)
T 2c1x_A 452 K 452 (456)
T ss_dssp S
T ss_pred h
Confidence 4
No 4
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=7.6e-60 Score=478.61 Aligned_cols=438 Identities=29% Similarity=0.453 Sum_probs=318.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC-CCEEEEEeCCcc--hhhhhhcccccccccCCCCeeEEecCCCCCCCCCC
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGLA-GLKVTFLNSKHN--HERLIRYTDIHDRFLQYSEFQFKTISDGLPADHPR 81 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~r-GH~Vt~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~ 81 (476)
.+++||+++|+|++||++|+++||++|++| ||+|||++++.+ ...+.+.. . ...+.+.|+.+++...+ ...
T Consensus 4 ~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~---~--~~~~~i~~~~l~~~~~~-~~~ 77 (480)
T 2vch_A 4 SKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVL---D--SLPSSISSVFLPPVDLT-DLS 77 (480)
T ss_dssp --CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHH---C---CCTTEEEEECCCCCCT-TSC
T ss_pred CCCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhc---c--ccCCCceEEEcCCCCCC-CCC
Confidence 456899999999999999999999999998 999999999763 23222210 0 00135888888754211 111
Q ss_pred CCCcHHHHHHHHHhhchHHHHHHHhcC--CCCc-eEEEECCCcchHHHHHHHcCCCeEEEecCchHHHHHHHhhhHHHhh
Q 011832 82 AGDQLMEMFDSLSLNTRPLLKQMLIDT--SPPV-SCIIGDACMEFVVDVATELEIPVIHFRAISACSFWAYFSIPEMIQA 158 (476)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~l~~ll~~~--~~~~-DlvI~D~~~~~~~~vA~~l~iP~i~~~~~~~~~~~~~~~~~~~~~~ 158 (476)
...+....+......+.+.+++++++. ..++ |+||+|.+..|+..+|+++|||++.+++++++....+.+++.....
T Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 157 (480)
T 2vch_A 78 SSTRIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDET 157 (480)
T ss_dssp TTCCHHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhc
Confidence 112333333333445567778887752 2478 9999999999999999999999999999998877766655533222
Q ss_pred CCCCCCcCCccccccccccCCCCcccccCCCCCccccCCCCchHHHHHHHHhhcCCCCcEEEEcchhhcchHHHHHHHh-
Q 011832 159 GELPMKAYDEDMDRLITKVPGMETFLRFRDLPSFCRVSDVTDRDLQVLKNATQQSPRAHALILNTFEDLEEPILSHIRT- 237 (476)
Q Consensus 159 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~l~~~~~- 237 (476)
...+.. . . +.....|++.. +....++..+... .....+...+.......++.+++||+.+|+++.+..+++
T Consensus 158 ~~~~~~--~--~-~~~~~~Pg~~p-~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~ 229 (480)
T 2vch_A 158 VSCEFR--E--L-TEPLMLPGCVP-VAGKDFLDPAQDR--KDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEP 229 (480)
T ss_dssp CCSCGG--G--C-SSCBCCTTCCC-BCGGGSCGGGSCT--TSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSC
T ss_pred CCCccc--c--c-CCcccCCCCCC-CChHHCchhhhcC--CchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhc
Confidence 211110 0 0 00112344433 3333343332211 112333333444455677889999999999988877763
Q ss_pred --hCCCeeeeCCCcccccccccccccccccccccCCccccchhhhhhhcCCCCCeEEEEEeccccccCHHHHHHHHHHHH
Q 011832 238 --KCPKVYTIGPLHLQLKTRFASNMISSSSQKSLNSLWEVDRSCIEWLGKQPVRSVLYVSFGSITLLKREQLIEFWHGLV 315 (476)
Q Consensus 238 --~~p~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~Gs~~~~~~~~~~~~~~a~~ 315 (476)
.+|++++|||++...... +.+..+.++.+||++++++++|||||||....+.+++.+++.+++
T Consensus 230 ~~~~~~v~~vGpl~~~~~~~---------------~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~ 294 (480)
T 2vch_A 230 GLDKPPVYPVGPLVNIGKQE---------------AKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLA 294 (480)
T ss_dssp CTTCCCEEECCCCCCCSCSC---------------C-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHH
T ss_pred ccCCCcEEEEeccccccccc---------------cCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHH
Confidence 257999999998643210 001134678999999878899999999998888899999999999
Q ss_pred hcCCceEEEECCCCCCC-----------c-hhhH-HHHHHhhcCCceEee-ccChHHHhhcccccccccccCchhHHHHH
Q 011832 316 DSKQRFLWVIRPDSVIG-----------E-GDAL-AELVEGTKERGLLVS-WVPQEEVLAHQAVAGFLTHSGWNSTLESI 381 (476)
Q Consensus 316 ~~~~~~i~~~~~~~~~~-----------~-~~~l-~~~~~~~~~nv~~~~-~~pq~~lL~~~~~~~~I~HGG~~s~~eal 381 (476)
.++++|||+++.....+ . ...+ +++.+++.++.+++. |+||.+||+|+++++||||||+||++||+
T Consensus 295 ~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal 374 (480)
T 2vch_A 295 DSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESV 374 (480)
T ss_dssp HTTCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHH
T ss_pred hcCCcEEEEECCccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHH
Confidence 99999999998653210 0 1123 344444444446665 99999999999999999999999999999
Q ss_pred hhCCceeccCCcccchhhHHHHHhhhcceeeccc----ccCHHHHHHHHHHHHh-HhHHHHHHHHHHHHHHHHHHHhcCC
Q 011832 382 VAGVPMICWPYFADQQINSRFVSEVWNLGLDMKD----VCDRNVVEKMVNDLMV-ERKEEFMRAADRMATMARTTANEGG 456 (476)
Q Consensus 382 ~~GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~~~----~~~~~~l~~~i~~~l~-~~~~~y~~~a~~~~~~~~~~~~~~g 456 (476)
++|||||++|+++||+.||+++++++|+|+.++. .+++++|+++|+++|+ +++++||+||+++++++++++.+||
T Consensus 375 ~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gG 454 (480)
T 2vch_A 375 VSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDG 454 (480)
T ss_dssp HHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTS
T ss_pred HcCCCEEeccccccchHHHHHHHHHhCeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999997678899999973 5899999999999998 2238999999999999999999999
Q ss_pred ChHHHHHHHHHHHHh
Q 011832 457 PSYCNLDRLIDDIKM 471 (476)
Q Consensus 457 ~~~~~~~~~i~~~~~ 471 (476)
++.+++++|++.+.+
T Consensus 455 ss~~~~~~~v~~~~~ 469 (480)
T 2vch_A 455 TSTKALSLVALKWKA 469 (480)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH
Confidence 999999999999875
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=3.2e-59 Score=472.27 Aligned_cols=434 Identities=26% Similarity=0.434 Sum_probs=322.1
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCcchh-----hhhhcccccccccCCCCeeEEecCCC-
Q 011832 3 EKPKSPHILIFPLPCQSHMNSMLKLAEIFGLA--GLKVTFLNSKHNHE-----RLIRYTDIHDRFLQYSEFQFKTISDG- 74 (476)
Q Consensus 3 ~~~~~~~il~~~~~~~gH~~p~l~La~~L~~r--GH~Vt~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~~l~~~- 74 (476)
+.++++||+++|+|++||++|+++||+.|++| ||+|||++++.+.. .+.+.. ...+.++|..+++.
T Consensus 5 ~~~~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~------~~~~~i~~~~lp~~~ 78 (463)
T 2acv_A 5 DINKNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVL------ASQPQIQLIDLPEVE 78 (463)
T ss_dssp HHHHCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHH------CSCTTEEEEECCCCC
T ss_pred cCCCCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcc------cCCCCceEEECCCCC
Confidence 33467899999999999999999999999999 99999999976532 111100 11235899999865
Q ss_pred CCCCCCCCCCcHHHHHHHHHhhchHHHHHHHhc-CCCCceEEEECCCcchHHHHHHHcCCCeEEEecCchHHHHHHHhhh
Q 011832 75 LPADHPRAGDQLMEMFDSLSLNTRPLLKQMLID-TSPPVSCIIGDACMEFVVDVATELEIPVIHFRAISACSFWAYFSIP 153 (476)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~-~~~~~DlvI~D~~~~~~~~vA~~l~iP~i~~~~~~~~~~~~~~~~~ 153 (476)
++. .+...+....+......+.+.+++++++ ...+||+||+|.++.|+..+|+++|||++.+++++++.+..+.+++
T Consensus 79 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~ 156 (463)
T 2acv_A 79 PPP--QELLKSPEFYILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLK 156 (463)
T ss_dssp CCC--GGGGGSHHHHHHHHHHHTHHHHHHHHHHHCCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGG
T ss_pred CCc--ccccCCccHHHHHHHHhhhHHHHHHHHhccCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHH
Confidence 332 1101111111333334556778888876 2248999999999999999999999999999999988776665544
Q ss_pred HHHhhCCCCCCcCCccccccccccCCC-CcccccCCCCCccccCCCCchHHHHHHHHhhcCCCCcEEEEcchhhcchHHH
Q 011832 154 EMIQAGELPMKAYDEDMDRLITKVPGM-ETFLRFRDLPSFCRVSDVTDRDLQVLKNATQQSPRAHALILNTFEDLEEPIL 232 (476)
Q Consensus 154 ~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~l 232 (476)
..... .+.. ...........|++ .. +....++..+... ........+.......++.+++||+++||++.+
T Consensus 157 ~~~~~--~~~~--~~~~~~~~~~~pg~~~~-~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~ 228 (463)
T 2acv_A 157 NRQIE--EVFD--DSDRDHQLLNIPGISNQ-VPSNVLPDACFNK---DGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSI 228 (463)
T ss_dssp GSCTT--CCCC--CSSGGGCEECCTTCSSC-EEGGGSCHHHHCT---TTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHH
T ss_pred hhccc--CCCC--CccccCceeECCCCCCC-CChHHCchhhcCC---chHHHHHHHHHHhcccCCEEEECCHHHHhHHHH
Confidence 32100 0110 00000002234555 33 4444443322211 123333344445567788999999999999988
Q ss_pred HHHHhh---CCCeeeeCCCcccccccccccccccccccccCCccccchhhhhhhcCCCCCeEEEEEecccc-ccCHHHHH
Q 011832 233 SHIRTK---CPKVYTIGPLHLQLKTRFASNMISSSSQKSLNSLWEVDRSCIEWLGKQPVRSVLYVSFGSIT-LLKREQLI 308 (476)
Q Consensus 233 ~~~~~~---~p~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~Gs~~-~~~~~~~~ 308 (476)
+.+++. .|++++|||++......... .+ |..+.++.+|++.++++++|||||||.. ..+.+++.
T Consensus 229 ~~l~~~~~p~~~v~~vGpl~~~~~~~~~~-----------~~-~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~ 296 (463)
T 2acv_A 229 DALYDHDEKIPPIYAVGPLLDLKGQPNPK-----------LD-QAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIR 296 (463)
T ss_dssp HHHHHHCTTSCCEEECCCCCCSSCCCBTT-----------BC-HHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHH
T ss_pred HHHHhccccCCcEEEeCCCcccccccccc-----------cc-cccchhHHHHHhcCCCCceEEEEeccccccCCHHHHH
Confidence 777664 46899999998643100000 00 2235678999999888899999999998 78888999
Q ss_pred HHHHHHHhcCCceEEEECCCCCCCchhhH-HHHHHhh--cCCceEeeccChHHHhhcccccccccccCchhHHHHHhhCC
Q 011832 309 EFWHGLVDSKQRFLWVIRPDSVIGEGDAL-AELVEGT--KERGLLVSWVPQEEVLAHQAVAGFLTHSGWNSTLESIVAGV 385 (476)
Q Consensus 309 ~~~~a~~~~~~~~i~~~~~~~~~~~~~~l-~~~~~~~--~~nv~~~~~~pq~~lL~~~~~~~~I~HGG~~s~~eal~~Gv 385 (476)
+++.+++..+.+|||+++.+ ...+ +++.+++ ++|+++++|+||.++|+|+++++||||||+||+.||+++||
T Consensus 297 ~~~~~l~~~~~~~l~~~~~~-----~~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~Gv 371 (463)
T 2acv_A 297 EIALGLKHSGVRFLWSNSAE-----KKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGV 371 (463)
T ss_dssp HHHHHHHHHTCEEEEECCCC-----GGGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTC
T ss_pred HHHHHHHhCCCcEEEEECCC-----cccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCC
Confidence 99999999999999999853 0122 4555566 88999999999999999999999999999999999999999
Q ss_pred ceeccCCcccchhhHHHHHhhhcceeec-c----c--ccCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCCh
Q 011832 386 PMICWPYFADQQINSRFVSEVWNLGLDM-K----D--VCDRNVVEKMVNDLMVERKEEFMRAADRMATMARTTANEGGPS 458 (476)
Q Consensus 386 P~l~iP~~~DQ~~na~~v~~~~G~G~~~-~----~--~~~~~~l~~~i~~~l~~~~~~y~~~a~~~~~~~~~~~~~~g~~ 458 (476)
|+|++|+++||+.||+++++++|+|+.+ + . .+++++|.++|+++|++ +++||+||+++++++++++.+||++
T Consensus 372 P~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~-~~~~r~~a~~l~~~~~~a~~~gGss 450 (463)
T 2acv_A 372 PILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDK-DSIVHKKVQEMKEMSRNAVVDGGSS 450 (463)
T ss_dssp CEEECCCSTTHHHHHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCT-TCTHHHHHHHHHHHHHHHTSTTSHH
T ss_pred CeeeccchhhhHHHHHHHHHHcCeEEEEecccCCCCccccHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHhcCCcH
Confidence 9999999999999999954788999999 2 3 58999999999999971 2689999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 011832 459 YCNLDRLIDDIK 470 (476)
Q Consensus 459 ~~~~~~~i~~~~ 470 (476)
.+++++|++.+.
T Consensus 451 ~~~l~~~v~~~~ 462 (463)
T 2acv_A 451 LISVGKLIDDIT 462 (463)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 999999999885
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=3.1e-44 Score=360.76 Aligned_cols=397 Identities=16% Similarity=0.152 Sum_probs=263.3
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhcccccccccCCCCeeEEecCCCCCCCCCC--
Q 011832 4 KPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHERLIRYTDIHDRFLQYSEFQFKTISDGLPADHPR-- 81 (476)
Q Consensus 4 ~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~-- 81 (476)
+++.|||+|+++++.||++|+++||++|++|||+||+++++.+.+.+.+.+ +++..++..++.+...
T Consensus 9 ~m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~g-----------~~~~~~~~~~~~~~~~~~ 77 (424)
T 2iya_A 9 SVTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAAG-----------ATPVVYDSILPKESNPEE 77 (424)
T ss_dssp --CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHT-----------CEEEECCCCSCCTTCTTC
T ss_pred CcccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhCC-----------CEEEecCccccccccchh
Confidence 345689999999999999999999999999999999999977766554443 5667776554432111
Q ss_pred -CCCcHHHHHHHHHh---hchHHHHHHHhcCCCCceEEEECCCcchHHHHHHHcCCCeEEEecCchHHHHHHHhhhHHHh
Q 011832 82 -AGDQLMEMFDSLSL---NTRPLLKQMLIDTSPPVSCIIGDACMEFVVDVATELEIPVIHFRAISACSFWAYFSIPEMIQ 157 (476)
Q Consensus 82 -~~~~~~~~~~~~~~---~~~~~l~~ll~~~~~~~DlvI~D~~~~~~~~vA~~l~iP~i~~~~~~~~~~~~~~~~~~~~~ 157 (476)
...+....+..+.. .+...+.+++++. +||+||+|.+..|+..+|+.+|||++.+++.+..... +........
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~-~~~~~~~~~ 154 (424)
T 2iya_A 78 SWPEDQESAMGLFLDEAVRVLPQLEDAYADD--RPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEG-FEEDVPAVQ 154 (424)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHHHHTTTS--CCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTT-HHHHSGGGS
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccc-ccccccccc
Confidence 11233333322222 2234455555555 8999999998889999999999999999987541110 000000000
Q ss_pred hCCCCCCcCCccccccccccC-CCCcccccCCCCCccccCCCCchHHHHHHHH------hhcCCCCcEEEEcchhhcchH
Q 011832 158 AGELPMKAYDEDMDRLITKVP-GMETFLRFRDLPSFCRVSDVTDRDLQVLKNA------TQQSPRAHALILNTFEDLEEP 230 (476)
Q Consensus 158 ~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~s~~~l~~~ 230 (476)
..+... ... ...+ ................ ...+...+...+. ......++.++++++++|+++
T Consensus 155 ~~~~~~-----~~~---~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~ 224 (424)
T 2iya_A 155 DPTADR-----GEE---AAAPAGTGDAEEGAEAEDGLV--RFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIK 224 (424)
T ss_dssp CCCC-----------------------------HHHHH--HHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTT
T ss_pred cccccc-----ccc---cccccccccchhhhccchhHH--HHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCC
Confidence 000000 000 0000 0000000000000000 0000011111100 001115678999999999987
Q ss_pred HHHHHHhhCCCeeeeCCCcccccccccccccccccccccCCccccchhhhhhhcCCCCCeEEEEEeccccccCHHHHHHH
Q 011832 231 ILSHIRTKCPKVYTIGPLHLQLKTRFASNMISSSSQKSLNSLWEVDRSCIEWLGKQPVRSVLYVSFGSITLLKREQLIEF 310 (476)
Q Consensus 231 ~l~~~~~~~p~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~Gs~~~~~~~~~~~~ 310 (476)
. ++..+++++|||+..... +..+|++..+++++|||++||......+.+..+
T Consensus 225 ~----~~~~~~~~~vGp~~~~~~------------------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~ 276 (424)
T 2iya_A 225 G----DTVGDNYTFVGPTYGDRS------------------------HQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTC 276 (424)
T ss_dssp G----GGCCTTEEECCCCCCCCG------------------------GGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHH
T ss_pred c----cCCCCCEEEeCCCCCCcc------------------------cCCCCCccCCCCCEEEEEcCCCCcchHHHHHHH
Confidence 2 234458999999764211 123566655567899999999986667888899
Q ss_pred HHHHHhcCCceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccChHHHhhcccccccccccCchhHHHHHhhCCceecc
Q 011832 311 WHGLVDSKQRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQEEVLAHQAVAGFLTHSGWNSTLESIVAGVPMICW 390 (476)
Q Consensus 311 ~~a~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HGG~~s~~eal~~GvP~l~i 390 (476)
+++++..+.+++|.++.+... +.+ ..+++|+.+.+|+||.++|+++++ ||||||+||+.||+++|||+|++
T Consensus 277 ~~al~~~~~~~~~~~g~~~~~------~~~-~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~ 347 (424)
T 2iya_A 277 LSAVDGLDWHVVLSVGRFVDP------ADL-GEVPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAV 347 (424)
T ss_dssp HHHHTTCSSEEEEECCTTSCG------GGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEEC
T ss_pred HHHHhcCCcEEEEEECCcCCh------HHh-ccCCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEe
Confidence 999998888999988754211 111 236889999999999999999998 99999999999999999999999
Q ss_pred CCcccchhhHHHHHhhhcceeeccc-ccCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 011832 391 PYFADQQINSRFVSEVWNLGLDMKD-VCDRNVVEKMVNDLMVERKEEFMRAADRMATMARTTANEGGPSYCNLDRLIDDI 469 (476)
Q Consensus 391 P~~~DQ~~na~~v~~~~G~G~~~~~-~~~~~~l~~~i~~~l~~~~~~y~~~a~~~~~~~~~~~~~~g~~~~~~~~~i~~~ 469 (476)
|...||+.||+++ ++.|+|+.+.. .++.++|.++|+++|+| ++|+++++++++.+++ .++..+ +.+.|+.+
T Consensus 348 p~~~dQ~~na~~l-~~~g~g~~~~~~~~~~~~l~~~i~~ll~~--~~~~~~~~~~~~~~~~----~~~~~~-~~~~i~~~ 419 (424)
T 2iya_A 348 PQIAEQTMNAERI-VELGLGRHIPRDQVTAEKLREAVLAVASD--PGVAERLAAVRQEIRE----AGGARA-AADILEGI 419 (424)
T ss_dssp CCSHHHHHHHHHH-HHTTSEEECCGGGCCHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHT----SCHHHH-HHHHHHHH
T ss_pred cCccchHHHHHHH-HHCCCEEEcCcCCCCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHh----cCcHHH-HHHHHHHH
Confidence 9999999999999 67899999984 78999999999999997 7899999999999775 343344 44444443
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=2.4e-43 Score=351.49 Aligned_cols=359 Identities=15% Similarity=0.145 Sum_probs=228.5
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhcccccccccCCCCeeEEecCCCCC--------
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHERLIRYTDIHDRFLQYSEFQFKTISDGLP-------- 76 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~-------- 76 (476)
.+.|||+|+++|+.||++|+++||++|++|||+|||++++.+.. +.+.+ +.+..+.....
T Consensus 20 ~~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~-~~~~g-----------~~~~~~~~~~~~~~~~~~~ 87 (400)
T 4amg_A 20 FQSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRA-VAEAG-----------LCAVDVSPGVNYAKLFVPD 87 (400)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHH-HHTTT-----------CEEEESSTTCCSHHHHSCC
T ss_pred CCCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhh-HHhcC-----------CeeEecCCchhHhhhcccc
Confidence 46799999999999999999999999999999999999966543 33333 23333221110
Q ss_pred ---CC--CCCCCCcHHHHHHHH---HhhchHHHHHHHhcCCCCceEEEECCCcchHHHHHHHcCCCeEEEecCchHHHHH
Q 011832 77 ---AD--HPRAGDQLMEMFDSL---SLNTRPLLKQMLIDTSPPVSCIIGDACMEFVVDVATELEIPVIHFRAISACSFWA 148 (476)
Q Consensus 77 ---~~--~~~~~~~~~~~~~~~---~~~~~~~l~~ll~~~~~~~DlvI~D~~~~~~~~vA~~l~iP~i~~~~~~~~~~~~ 148 (476)
.. ..............+ .......+.+++++. +||+||+|.+.+++..+|+.+|||++.+...+......
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~ 165 (400)
T 4amg_A 88 DTDVTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARSW--RPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPG 165 (400)
T ss_dssp C------------CHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHH
T ss_pred ccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCEEEECcchHHHHHHHHHcCCCceeecccccccccc
Confidence 00 000001111111112 222233444555566 89999999999999999999999999987654322111
Q ss_pred HHhhhHHHhhCCCCCCcCCccccccccccCCCCcccccCCCCCccccCCCCchHHHHHHHHh-hcCCCCcEEEEcchhhc
Q 011832 149 YFSIPEMIQAGELPMKAYDEDMDRLITKVPGMETFLRFRDLPSFCRVSDVTDRDLQVLKNAT-QQSPRAHALILNTFEDL 227 (476)
Q Consensus 149 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~s~~~l 227 (476)
....... ...+...+.. .........+....+.+
T Consensus 166 ~~~~~~~---------------------------------------------~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (400)
T 4amg_A 166 LGALIRR---------------------------------------------AMSKDYERHGVTGEPTGSVRLTTTPPSV 200 (400)
T ss_dssp HHHHHHH---------------------------------------------HTHHHHHHTTCCCCCSCEEEEECCCHHH
T ss_pred hhhHHHH---------------------------------------------HHHHHHHHhCCCcccccchhhcccCchh
Confidence 1110000 0000000000 00011122222222111
Q ss_pred chHHHHHHHhhCCCeeeeCCCcccccccccccccccccccccCCccccchhhhhhhcCCCCCeEEEEEecccccc--CHH
Q 011832 228 EEPILSHIRTKCPKVYTIGPLHLQLKTRFASNMISSSSQKSLNSLWEVDRSCIEWLGKQPVRSVLYVSFGSITLL--KRE 305 (476)
Q Consensus 228 ~~~~l~~~~~~~p~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~Gs~~~~--~~~ 305 (476)
.... ......+..+.+.+..... ...+.+|++..+++++|||||||.... ..+
T Consensus 201 ~~~~--~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~ 255 (400)
T 4amg_A 201 EALL--PEDRRSPGAWPMRYVPYNG-----------------------GAVLPDWLPPAAGRRRIAVTLGSIDALSGGIA 255 (400)
T ss_dssp HHTS--CGGGCCTTCEECCCCCCCC-----------------------CEECCTTCSCCTTCCEEEECCCSCC--CCSSS
T ss_pred hccC--cccccCCcccCcccccccc-----------------------cccCcccccccCCCcEEEEeCCcccccCccHH
Confidence 1000 0001112233333222211 122346888778889999999998633 235
Q ss_pred HHHHHHHHHHhcCCceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccChHHHhhcccccccccccCchhHHHHHhhCC
Q 011832 306 QLIEFWHGLVDSKQRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQEEVLAHQAVAGFLTHSGWNSTLESIVAGV 385 (476)
Q Consensus 306 ~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HGG~~s~~eal~~Gv 385 (476)
.+..++++++..+.+++|..++...... ..+|+|+++.+|+||.++|+|+++ ||||||+||+.||+++||
T Consensus 256 ~~~~~~~~l~~~~~~~v~~~~~~~~~~~--------~~~~~~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~Gv 325 (400)
T 4amg_A 256 KLAPLFSEVADVDAEFVLTLGGGDLALL--------GELPANVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGV 325 (400)
T ss_dssp TTHHHHHHGGGSSSEEEEECCTTCCCCC--------CCCCTTEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTC
T ss_pred HHHHHHHHhhccCceEEEEecCcccccc--------ccCCCCEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCC
Confidence 6788999999999999999876533211 247899999999999999999888 999999999999999999
Q ss_pred ceeccCCcccchhhHHHHHhhhcceeeccc-ccCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHH
Q 011832 386 PMICWPYFADQQINSRFVSEVWNLGLDMKD-VCDRNVVEKMVNDLMVERKEEFMRAADRMATMARTTANEGGPSYCNLDR 464 (476)
Q Consensus 386 P~l~iP~~~DQ~~na~~v~~~~G~G~~~~~-~~~~~~l~~~i~~~l~~~~~~y~~~a~~~~~~~~~~~~~~g~~~~~~~~ 464 (476)
|+|++|+++||+.||+++ +++|+|+.++. ++++ ++|+++|+| ++||++|+++++.+++. . + -..+.+
T Consensus 326 P~v~~P~~~dQ~~na~~v-~~~G~g~~l~~~~~~~----~al~~lL~d--~~~r~~a~~l~~~~~~~---~-~-~~~~a~ 393 (400)
T 4amg_A 326 PQCVIPHGSYQDTNRDVL-TGLGIGFDAEAGSLGA----EQCRRLLDD--AGLREAALRVRQEMSEM---P-P-PAETAA 393 (400)
T ss_dssp CEEECCC---CHHHHHHH-HHHTSEEECCTTTCSH----HHHHHHHHC--HHHHHHHHHHHHHHHTS---C-C-HHHHHH
T ss_pred CEEEecCcccHHHHHHHH-HHCCCEEEcCCCCchH----HHHHHHHcC--HHHHHHHHHHHHHHHcC---C-C-HHHHHH
Confidence 999999999999999999 77899999984 5655 567788998 89999999999998762 3 3 344556
Q ss_pred HHHHH
Q 011832 465 LIDDI 469 (476)
Q Consensus 465 ~i~~~ 469 (476)
.|++|
T Consensus 394 ~le~l 398 (400)
T 4amg_A 394 XLVAL 398 (400)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 66655
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=2e-43 Score=353.65 Aligned_cols=384 Identities=14% Similarity=0.107 Sum_probs=252.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhcccccccccCCCCeeEEecCCCCCCCCCCCCCcHH
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHERLIRYTDIHDRFLQYSEFQFKTISDGLPADHPRAGDQLM 87 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~ 87 (476)
|||+|++.++.||++|+++||++|++|||+|||++++...+.+.+.+ +++..++...............
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~g-----------~~~~~i~~~~~~~~~~~~~~~~ 69 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEVG-----------VPHVPVGPSARAPIQRAKPLTA 69 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTT-----------CCEEECCC-------CCSCCCH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHcC-----------CeeeeCCCCHHHHhhcccccch
Confidence 79999999999999999999999999999999999976544444332 5666665432111000000111
Q ss_pred HHH-HHHHhhchHHHHHHHhcCCCCceEEEECC-Ccch--HHHHHHHcCCCeEEEecCchHHHHHHHhhhHHHhhCCCCC
Q 011832 88 EMF-DSLSLNTRPLLKQMLIDTSPPVSCIIGDA-CMEF--VVDVATELEIPVIHFRAISACSFWAYFSIPEMIQAGELPM 163 (476)
Q Consensus 88 ~~~-~~~~~~~~~~l~~ll~~~~~~~DlvI~D~-~~~~--~~~vA~~l~iP~i~~~~~~~~~~~~~~~~~~~~~~~~~p~ 163 (476)
..+ ..+.......++++++.. .+||+||+|. +..| +..+|+.+|||++.+++++.... ..+.|.
T Consensus 70 ~~~~~~~~~~~~~~~~~l~~~~-~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~-----------~~~~p~ 137 (415)
T 1iir_A 70 EDVRRFTTEAIATQFDEIPAAA-EGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVP-----------SPYYPP 137 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-TTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSC-----------CSSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-cCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCC-----------CcccCC
Confidence 111 111112234455555422 4899999998 5568 89999999999999988764321 112222
Q ss_pred CcCCccccccccccCC-CCcccccCCCCCccccCCCCchHHHHHHHHh---------hcCCCCcEEEEcchhhcch-HHH
Q 011832 164 KAYDEDMDRLITKVPG-METFLRFRDLPSFCRVSDVTDRDLQVLKNAT---------QQSPRAHALILNTFEDLEE-PIL 232 (476)
Q Consensus 164 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~s~~~l~~-~~l 232 (476)
. ... +.+.++ ..|.+... +........ .....+...... +..... .+++|+++.|++ +
T Consensus 138 ~--~~~----~~~~~~~~~n~~~~~-~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~-- 206 (415)
T 1iir_A 138 P--PLG----EPSTQDTIDIPAQWE-RNNQSAYQR-YGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVLAPLQ-- 206 (415)
T ss_dssp C--C-------------CHHHHHHH-HHHHHHHHH-HHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTTSCCC--
T ss_pred c--cCC----ccccchHHHHHHHHH-HHHHHHHHH-hHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhhcCCC--
Confidence 1 100 000011 11100000 000000000 000000000000 001122 689999999988 5
Q ss_pred HHHHhhCCCeeeeCCCcccccccccccccccccccccCCccccchhhhhhhcCCCCCeEEEEEeccccccCHHHHHHHHH
Q 011832 233 SHIRTKCPKVYTIGPLHLQLKTRFASNMISSSSQKSLNSLWEVDRSCIEWLGKQPVRSVLYVSFGSITLLKREQLIEFWH 312 (476)
Q Consensus 233 ~~~~~~~p~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~Gs~~~~~~~~~~~~~~ 312 (476)
++.+ ++++||++..... |..+.++.+|++.. +++|||++||.. ...+....+++
T Consensus 207 ---~~~~-~~~~vG~~~~~~~-------------------~~~~~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~~~~~~ 260 (415)
T 1iir_A 207 ---PTDL-DAVQTGAWILPDE-------------------RPLSPELAAFLDAG--PPPVYLGFGSLG-APADAVRVAID 260 (415)
T ss_dssp ---CCSS-CCEECCCCCCCCC-------------------CCCCHHHHHHHHTS--SCCEEEECC----CCHHHHHHHHH
T ss_pred ---cccC-CeEeeCCCccCcc-------------------cCCCHHHHHHHhhC--CCeEEEeCCCCC-CcHHHHHHHHH
Confidence 4555 8999999986422 11345688999764 368999999987 56788888999
Q ss_pred HHHhcCCceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccChHHHhhcccccccccccCchhHHHHHhhCCceeccCC
Q 011832 313 GLVDSKQRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQEEVLAHQAVAGFLTHSGWNSTLESIVAGVPMICWPY 392 (476)
Q Consensus 313 a~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HGG~~s~~eal~~GvP~l~iP~ 392 (476)
+++..+.+++|+++.+... . ..+++|+.+.+|+||.++|+.+++ ||||||+||+.||+++|||+|++|.
T Consensus 261 al~~~~~~~v~~~g~~~~~-----~----~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~ 329 (415)
T 1iir_A 261 AIRAHGRRVILSRGWADLV-----L----PDDGADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILLPQ 329 (415)
T ss_dssp HHHHTTCCEEECTTCTTCC-----C----SSCGGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCC
T ss_pred HHHHCCCeEEEEeCCCccc-----c----cCCCCCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEEECCC
Confidence 9999999999998754211 0 235789999999999999988777 9999999999999999999999999
Q ss_pred cccchhhHHHHHhhhcceeeccc-ccCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 011832 393 FADQQINSRFVSEVWNLGLDMKD-VCDRNVVEKMVNDLMVERKEEFMRAADRMATMARTTANEGGPSYCNLDRLIDDIKM 471 (476)
Q Consensus 393 ~~DQ~~na~~v~~~~G~G~~~~~-~~~~~~l~~~i~~~l~~~~~~y~~~a~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~ 471 (476)
..||+.||+++ ++.|+|+.++. +++.++|.++|+++ +| ++|+++++++++.++. ......+.+.|+.+.+
T Consensus 330 ~~dQ~~na~~l-~~~g~g~~~~~~~~~~~~l~~~i~~l-~~--~~~~~~~~~~~~~~~~-----~~~~~~~~~~i~~~~~ 400 (415)
T 1iir_A 330 MADQPYYAGRV-AELGVGVAHDGPIPTFDSLSAALATA-LT--PETHARATAVAGTIRT-----DGAAVAARLLLDAVSR 400 (415)
T ss_dssp STTHHHHHHHH-HHHTSEEECSSSSCCHHHHHHHHHHH-TS--HHHHHHHHHHHHHSCS-----CHHHHHHHHHHHHHHT
T ss_pred CCccHHHHHHH-HHCCCcccCCcCCCCHHHHHHHHHHH-cC--HHHHHHHHHHHHHHhh-----cChHHHHHHHHHHHHh
Confidence 99999999999 78899999984 78999999999999 87 7999999999988653 2234455555555543
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=1.8e-42 Score=346.92 Aligned_cols=368 Identities=12% Similarity=0.081 Sum_probs=248.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhcccccccccCCCCeeEEecCCCCCCCCCC-CCCcH
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHERLIRYTDIHDRFLQYSEFQFKTISDGLPADHPR-AGDQL 86 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~-~~~~~ 86 (476)
|||+|++.++.||++|+++||++|+++||+|+|++++...+.+.+.+ +++..++......... .....
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~g-----------~~~~~~~~~~~~~~~~~~~~~~ 69 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEVG-----------VPHVPVGLPQHMMLQEGMPPPP 69 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHT-----------CCEEECSCCGGGCCCTTSCCCC
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHcC-----------CeeeecCCCHHHHHhhccccch
Confidence 79999999999999999999999999999999999976555554443 5566665332110000 00111
Q ss_pred H-HHHHHHHhhchHHHHHHHhcCCCCceEEEECCC-cch--HHHHHHHcCCCeEEEecCchHHHHHHHhhhHHHhhCCCC
Q 011832 87 M-EMFDSLSLNTRPLLKQMLIDTSPPVSCIIGDAC-MEF--VVDVATELEIPVIHFRAISACSFWAYFSIPEMIQAGELP 162 (476)
Q Consensus 87 ~-~~~~~~~~~~~~~l~~ll~~~~~~~DlvI~D~~-~~~--~~~vA~~l~iP~i~~~~~~~~~~~~~~~~~~~~~~~~~p 162 (476)
. .....+.......++++... ..+||+||+|.+ ..+ +..+|+.+|||++.+++++.... ..+.|
T Consensus 70 ~~~~~~~~~~~~~~~~~~l~~~-~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~-----------~~~~p 137 (416)
T 1rrv_A 70 PEEEQRLAAMTVEMQFDAVPGA-AEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLA-----------SPHLP 137 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-TTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSC-----------CSSSC
T ss_pred hHHHHHHHHHHHHHHHHHHHHH-hcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCC-----------CcccC
Confidence 1 11111112223334444332 248999999974 446 88999999999999987653211 01122
Q ss_pred CCcCCccccccccccCC-CCcccccCCCCCccccCCCCchHHHHHHHH---------hhcCCCCcEEEEcchhhcchHHH
Q 011832 163 MKAYDEDMDRLITKVPG-METFLRFRDLPSFCRVSDVTDRDLQVLKNA---------TQQSPRAHALILNTFEDLEEPIL 232 (476)
Q Consensus 163 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~~s~~~l~~~~l 232 (476)
. ... +.+.++ +.|.+......... ........ +..... .+...+. .+++|++++|+++
T Consensus 138 -~--~~~----~~~~~~r~~n~~~~~~~~~~~-~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~-- 205 (416)
T 1rrv_A 138 -P--AYD----EPTTPGVTDIRVLWEERAARF-ADRYGPTL-NRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLAPL-- 205 (416)
T ss_dssp -C--CBC----SCCCTTCCCHHHHHHHHHHHH-HHHHHHHH-HHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTSCC--
T ss_pred -C--CCC----CCCCchHHHHHHHHHHHHHHH-HHHhHHHH-HHHHHHcCCCCCCchhhhccCC-CeEEccCccccCC--
Confidence 1 000 000011 11100000000000 00000000 000000 0111233 7999999999886
Q ss_pred HHHHhhCCCeeeeCCCcccccccccccccccccccccCCccccchhhhhhhcCCCCCeEEEEEeccccc-cCHHHHHHHH
Q 011832 233 SHIRTKCPKVYTIGPLHLQLKTRFASNMISSSSQKSLNSLWEVDRSCIEWLGKQPVRSVLYVSFGSITL-LKREQLIEFW 311 (476)
Q Consensus 233 ~~~~~~~p~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~Gs~~~-~~~~~~~~~~ 311 (476)
++.+ ++++||++..... |+.+.++.+|++.. +++|||++||... ...+.+..++
T Consensus 206 ---~~~~-~~~~vG~~~~~~~-------------------~~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~ 260 (416)
T 1rrv_A 206 ---QPDV-DAVQTGAWLLSDE-------------------RPLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAV 260 (416)
T ss_dssp ---CSSC-CCEECCCCCCCCC-------------------CCCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHH
T ss_pred ---CCCC-CeeeECCCccCcc-------------------CCCCHHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHH
Confidence 4555 8999999986432 11345678899764 3689999999863 4567788899
Q ss_pred HHHHhcCCceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccChHHHhhcccccccccccCchhHHHHHhhCCceeccC
Q 011832 312 HGLVDSKQRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQEEVLAHQAVAGFLTHSGWNSTLESIVAGVPMICWP 391 (476)
Q Consensus 312 ~a~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HGG~~s~~eal~~GvP~l~iP 391 (476)
++++..+.+++|+++.+... . ..+++|+.+.+|+||.++|+++++ ||||||+||+.||+++|||+|++|
T Consensus 261 ~al~~~~~~~v~~~g~~~~~-----~----~~~~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p 329 (416)
T 1rrv_A 261 EAIRAQGRRVILSRGWTELV-----L----PDDRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIP 329 (416)
T ss_dssp HHHHHTTCCEEEECTTTTCC-----C----SCCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECC
T ss_pred HHHHHCCCeEEEEeCCcccc-----c----cCCCCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCCEEEcc
Confidence 99999999999998755211 0 236789999999999999988887 999999999999999999999999
Q ss_pred CcccchhhHHHHHhhhcceeeccc-ccCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHH
Q 011832 392 YFADQQINSRFVSEVWNLGLDMKD-VCDRNVVEKMVNDLMVERKEEFMRAADRMATMART 450 (476)
Q Consensus 392 ~~~DQ~~na~~v~~~~G~G~~~~~-~~~~~~l~~~i~~~l~~~~~~y~~~a~~~~~~~~~ 450 (476)
...||+.||+++ ++.|+|+.++. +++.++|.++|+++ +| ++|+++++++++.+++
T Consensus 330 ~~~dQ~~na~~l-~~~g~g~~~~~~~~~~~~l~~~i~~l-~~--~~~~~~~~~~~~~~~~ 385 (416)
T 1rrv_A 330 RNTDQPYFAGRV-AALGIGVAHDGPTPTFESLSAALTTV-LA--PETRARAEAVAGMVLT 385 (416)
T ss_dssp CSBTHHHHHHHH-HHHTSEEECSSSCCCHHHHHHHHHHH-TS--HHHHHHHHHHTTTCCC
T ss_pred CCCCcHHHHHHH-HHCCCccCCCCCCCCHHHHHHHHHHh-hC--HHHHHHHHHHHHHHhh
Confidence 999999999999 77899999974 78999999999999 87 7999999999888654
No 10
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=3.9e-39 Score=322.62 Aligned_cols=377 Identities=15% Similarity=0.120 Sum_probs=258.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhcccccccccCCCCeeEEecCCCCCCCCC----
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHERLIRYTDIHDRFLQYSEFQFKTISDGLPADHP---- 80 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~---- 80 (476)
.++|||+|++.++.||++|+++||++|+++||+|++++++.+.+.+.+.+ +.+..++...+....
T Consensus 18 ~~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~G-----------~~~~~~~~~~~~~~~~~~~ 86 (415)
T 3rsc_A 18 RHMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAAG-----------ATVVPYQSEIIDADAAEVF 86 (415)
T ss_dssp -CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHTT-----------CEEEECCCSTTTCCHHHHH
T ss_pred ccCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhcC-----------CEEEeccccccccccchhh
Confidence 45689999999999999999999999999999999999877666655443 667776643332110
Q ss_pred ---CCCCcHHHHHHHHHhhchHHHHHHHhcCCCCceEEEEC-CCcchHHHHHHHcCCCeEEEecCchHHHHHHHhhhHHH
Q 011832 81 ---RAGDQLMEMFDSLSLNTRPLLKQMLIDTSPPVSCIIGD-ACMEFVVDVATELEIPVIHFRAISACSFWAYFSIPEMI 156 (476)
Q Consensus 81 ---~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~DlvI~D-~~~~~~~~vA~~l~iP~i~~~~~~~~~~~~~~~~~~~~ 156 (476)
.....+...+..........+.+++++. +||+||+| ....++..+|+.+|||++.+.+....... +...+...
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~-~~~~~~~~ 163 (415)
T 3rsc_A 87 GSDDLGVRPHLMYLRENVSVLRATAEALDGD--VPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEH-YSFSQDMV 163 (415)
T ss_dssp HSSSSCHHHHHHHHHHHHHHHHHHHHHHSSS--CCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSS-CCHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCc-cccccccc
Confidence 0000111101111122234556666666 89999999 77778899999999999998754321000 00000000
Q ss_pred hhCCCCCCcCCccccccccccCCCCcccccCCCCCccccCCCCchHHHHHHHH------hhcCC-CCcEEEEcchhhcch
Q 011832 157 QAGELPMKAYDEDMDRLITKVPGMETFLRFRDLPSFCRVSDVTDRDLQVLKNA------TQQSP-RAHALILNTFEDLEE 229 (476)
Q Consensus 157 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~-~~~~~l~~s~~~l~~ 229 (476)
+. +.+. .+.. .. ...+...+..... ..... .++..++.+.+.+++
T Consensus 164 ~~-~~~~-------------~p~~------------~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~ 215 (415)
T 3rsc_A 164 TL-AGTI-------------DPLD------------LP--VFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQI 215 (415)
T ss_dssp HH-HTCC-------------CGGG------------CH--HHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTST
T ss_pred cc-cccC-------------Chhh------------HH--HHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCC
Confidence 00 0000 0000 00 0000000000000 00011 237888888888887
Q ss_pred HHHHHHHhhCC-CeeeeCCCcccccccccccccccccccccCCccccchhhhhhhcCCCCCeEEEEEeccccccCHHHHH
Q 011832 230 PILSHIRTKCP-KVYTIGPLHLQLKTRFASNMISSSSQKSLNSLWEVDRSCIEWLGKQPVRSVLYVSFGSITLLKREQLI 308 (476)
Q Consensus 230 ~~l~~~~~~~p-~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~Gs~~~~~~~~~~ 308 (476)
+ ++.++ ++.++|++..... +..+|....+++++|||++||......+.+.
T Consensus 216 ~-----~~~~~~~~~~vGp~~~~~~------------------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~ 266 (415)
T 3rsc_A 216 A-----GDTFDDRFVFVGPCFDDRR------------------------FLGEWTRPADDLPVVLVSLGTTFNDRPGFFR 266 (415)
T ss_dssp T-----GGGCCTTEEECCCCCCCCG------------------------GGCCCCCCSSCCCEEEEECTTTSCCCHHHHH
T ss_pred C-----cccCCCceEEeCCCCCCcc------------------------cCcCccccCCCCCEEEEECCCCCCChHHHHH
Confidence 7 56555 7999998874322 1223544445678999999999766778888
Q ss_pred HHHHHHHhcCCceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccChHHHhhcccccccccccCchhHHHHHhhCCcee
Q 011832 309 EFWHGLVDSKQRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQEEVLAHQAVAGFLTHSGWNSTLESIVAGVPMI 388 (476)
Q Consensus 309 ~~~~a~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HGG~~s~~eal~~GvP~l 388 (476)
.+++++...+.+++|.++.+... +.+ ..+++|+.+.+|+|+.++|+++++ +|||||.||+.||+++|+|+|
T Consensus 267 ~~~~al~~~~~~~v~~~g~~~~~------~~l-~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v 337 (415)
T 3rsc_A 267 DCARAFDGQPWHVVMTLGGQVDP------AAL-GDLPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLV 337 (415)
T ss_dssp HHHHHHTTSSCEEEEECTTTSCG------GGG-CCCCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEE
T ss_pred HHHHHHhcCCcEEEEEeCCCCCh------HHh-cCCCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEE
Confidence 99999999898999988744211 111 236789999999999999999998 999999999999999999999
Q ss_pred ccCCcccchhhHHHHHhhhcceeeccc-ccCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 011832 389 CWPYFADQQINSRFVSEVWNLGLDMKD-VCDRNVVEKMVNDLMVERKEEFMRAADRMATMARTTANEGGPSYCNLDRLID 467 (476)
Q Consensus 389 ~iP~~~DQ~~na~~v~~~~G~G~~~~~-~~~~~~l~~~i~~~l~~~~~~y~~~a~~~~~~~~~~~~~~g~~~~~~~~~i~ 467 (476)
++|...||+.||+++ ++.|+|..+.. +++.+.|.++|.++|+| ++|+++++++++.+.+ .++..+.++.+.+
T Consensus 338 ~~p~~~~q~~~a~~l-~~~g~g~~~~~~~~~~~~l~~~i~~ll~~--~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~ 410 (415)
T 3rsc_A 338 VVPQSFDVQPMARRV-DQLGLGAVLPGEKADGDTLLAAVGAVAAD--PALLARVEAMRGHVRR----AGGAARAADAVEA 410 (415)
T ss_dssp ECCCSGGGHHHHHHH-HHHTCEEECCGGGCCHHHHHHHHHHHHTC--HHHHHHHHHHHHHHHH----SCHHHHHHHHHHH
T ss_pred EeCCcchHHHHHHHH-HHcCCEEEcccCCCCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHh----cCHHHHHHHHHHH
Confidence 999999999999999 77899999985 78999999999999998 8999999999999776 4444455444443
Q ss_pred H
Q 011832 468 D 468 (476)
Q Consensus 468 ~ 468 (476)
.
T Consensus 411 ~ 411 (415)
T 3rsc_A 411 Y 411 (415)
T ss_dssp H
T ss_pred H
Confidence 3
No 11
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=4.9e-40 Score=327.67 Aligned_cols=371 Identities=14% Similarity=0.052 Sum_probs=245.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhcccccccccCCCCeeEEecCCCCCCC---CCCCCC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHERLIRYTDIHDRFLQYSEFQFKTISDGLPAD---HPRAGD 84 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~---~~~~~~ 84 (476)
|||+|++.++.||++|++.||++|.+|||+|+|++++...+.+++.+ +.+..++...... ......
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~~g-----------~~~~~l~~~~~~~~~~~~~~~~ 69 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEVG-----------VPMVPVGRAVRAGAREPGELPP 69 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHHTT-----------CCEEECSSCSSGGGSCTTCCCT
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHcC-----------CceeecCCCHHHHhccccCCHH
Confidence 79999999999999999999999999999999999976555554444 5555554222110 000011
Q ss_pred cHHHHHHHHHhhchHHHHHHHhcCCCCceEEEECCCcchH---HHHHHHcCCCeEEEecCchHHHHHHHhhhHHHhhCCC
Q 011832 85 QLMEMFDSLSLNTRPLLKQMLIDTSPPVSCIIGDACMEFV---VDVATELEIPVIHFRAISACSFWAYFSIPEMIQAGEL 161 (476)
Q Consensus 85 ~~~~~~~~~~~~~~~~l~~ll~~~~~~~DlvI~D~~~~~~---~~vA~~l~iP~i~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (476)
.....+. ......++++.+.. .+||+||+|.....+ ..+|+.+|||++.+..++.............
T Consensus 70 ~~~~~~~---~~~~~~~~~l~~~~-~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~~~~~~------ 139 (404)
T 3h4t_A 70 GAAEVVT---EVVAEWFDKVPAAI-EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQAERD------ 139 (404)
T ss_dssp TCGGGHH---HHHHHHHHHHHHHH-TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCHHHHH------
T ss_pred HHHHHHH---HHHHHHHHHHHHHh-cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChhHHHHHH------
Confidence 1111111 11122223332221 268999998665534 7899999999999887764211000000000
Q ss_pred CCCcCCcccccccc--ccCCCCcccc-cCCCCCccccCCCCchHHHHHHHHhhcCCCCcEEEEcchhhcchHHHHHHHhh
Q 011832 162 PMKAYDEDMDRLIT--KVPGMETFLR-FRDLPSFCRVSDVTDRDLQVLKNATQQSPRAHALILNTFEDLEEPILSHIRTK 238 (476)
Q Consensus 162 p~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~l~~~~~~ 238 (476)
..+... ......+... ...+. ..... ... ...+..+++..+.+.+. ++.
T Consensus 140 --------~~~~~~~~~~~~~~~~~~~~lgl~------~~~~~-~~~--------~~~~~~l~~~~~~l~p~-----~~~ 191 (404)
T 3h4t_A 140 --------MYNQGADRLFGDAVNSHRASIGLP------PVEHL-YDY--------GYTDQPWLAADPVLSPL-----RPT 191 (404)
T ss_dssp --------HHHHHHHHHHHHHHHHHHHHTTCC------CCCCH-HHH--------HHCSSCEECSCTTTSCC-----CTT
T ss_pred --------HHHHHHHHHhHHHHHHHHHHcCCC------CCcch-hhc--------cccCCeEEeeCcceeCC-----CCC
Confidence 000000 0000000000 00000 00000 000 01233466777777666 454
Q ss_pred CCCeeeeCCCcccccccccccccccccccccCCccccchhhhhhhcCCCCCeEEEEEeccccccCHHHHHHHHHHHHhcC
Q 011832 239 CPKVYTIGPLHLQLKTRFASNMISSSSQKSLNSLWEVDRSCIEWLGKQPVRSVLYVSFGSITLLKREQLIEFWHGLVDSK 318 (476)
Q Consensus 239 ~p~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~Gs~~~~~~~~~~~~~~a~~~~~ 318 (476)
.++++++|++...... ..++++.+|++. .+++|||++||... ..+.+..++++++..+
T Consensus 192 ~~~~~~~G~~~~~~~~-------------------~~~~~l~~~l~~--~~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~ 249 (404)
T 3h4t_A 192 DLGTVQTGAWILPDQR-------------------PLSAELEGFLRA--GSPPVYVGFGSGPA-PAEAARVAIEAVRAQG 249 (404)
T ss_dssp CCSCCBCCCCCCCCCC-------------------CCCHHHHHHHHT--SSCCEEECCTTSCC-CTTHHHHHHHHHHHTT
T ss_pred CCCeEEeCccccCCCC-------------------CCCHHHHHHHhc--CCCeEEEECCCCCC-cHHHHHHHHHHHHhCC
Confidence 5689999988754321 134668889875 35699999999976 6788889999999999
Q ss_pred CceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccChHHHhhcccccccccccCchhHHHHHhhCCceeccCCcccchh
Q 011832 319 QRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQEEVLAHQAVAGFLTHSGWNSTLESIVAGVPMICWPYFADQQI 398 (476)
Q Consensus 319 ~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HGG~~s~~eal~~GvP~l~iP~~~DQ~~ 398 (476)
.++||+.+...... ...++|+.+.+|+||.++|+++++ ||||||.||+.||+++|||+|++|+.+||+.
T Consensus 250 ~~vv~~~g~~~~~~---------~~~~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~ 318 (404)
T 3h4t_A 250 RRVVLSSGWAGLGR---------IDEGDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQPY 318 (404)
T ss_dssp CCEEEECTTTTCCC---------SSCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHH
T ss_pred CEEEEEeCCccccc---------ccCCCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHHH
Confidence 99999987553211 124789999999999999998888 9999999999999999999999999999999
Q ss_pred hHHHHHhhhcceeeccc-ccCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 011832 399 NSRFVSEVWNLGLDMKD-VCDRNVVEKMVNDLMVERKEEFMRAADRMATMARTTANEGGPSYCNLDRLIDDIK 470 (476)
Q Consensus 399 na~~v~~~~G~G~~~~~-~~~~~~l~~~i~~~l~~~~~~y~~~a~~~~~~~~~~~~~~g~~~~~~~~~i~~~~ 470 (476)
||+++ ++.|+|..+.. +++.+.|.++|+++|+ ++|+++++++++.++ + .+ ...+.+.|+.+.
T Consensus 319 na~~~-~~~G~g~~l~~~~~~~~~l~~ai~~ll~---~~~~~~~~~~~~~~~----~-~~-~~~~~~~i~~~~ 381 (404)
T 3h4t_A 319 YAGRV-ADLGVGVAHDGPTPTVESLSAALATALT---PGIRARAAAVAGTIR----T-DG-TTVAAKLLLEAI 381 (404)
T ss_dssp HHHHH-HHHTSEEECSSSSCCHHHHHHHHHHHTS---HHHHHHHHHHHTTCC----C-CH-HHHHHHHHHHHH
T ss_pred HHHHH-HHCCCEeccCcCCCCHHHHHHHHHHHhC---HHHHHHHHHHHHHHh----h-hH-HHHHHHHHHHHH
Confidence 99999 78899999984 7899999999999997 489999999998843 3 33 344444444443
No 12
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=3.1e-38 Score=314.57 Aligned_cols=372 Identities=16% Similarity=0.134 Sum_probs=254.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhcccccccccCCCCeeEEecCCCCCCCCC---CCC
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHERLIRYTDIHDRFLQYSEFQFKTISDGLPADHP---RAG 83 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~---~~~ 83 (476)
.|||+|++.++.||++|++.||++|+++||+|++++++.+.+.+...+ +.+..++..++.... ...
T Consensus 4 M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~G-----------~~~~~~~~~~~~~~~~~~~~~ 72 (402)
T 3ia7_A 4 QRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAAG-----------AEVVLYKSEFDTFHVPEVVKQ 72 (402)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHTT-----------CEEEECCCGGGTSSSSSSSCC
T ss_pred CCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHHcC-----------CEEEecccccccccccccccc
Confidence 359999999999999999999999999999999999866655554443 566666533222110 111
Q ss_pred CcHHHHHHH-HHh---hchHHHHHHHhcCCCCceEEEEC-CCcchHHHHHHHcCCCeEEEecCchHHHHHHHhhhHHHhh
Q 011832 84 DQLMEMFDS-LSL---NTRPLLKQMLIDTSPPVSCIIGD-ACMEFVVDVATELEIPVIHFRAISACSFWAYFSIPEMIQA 158 (476)
Q Consensus 84 ~~~~~~~~~-~~~---~~~~~l~~ll~~~~~~~DlvI~D-~~~~~~~~vA~~l~iP~i~~~~~~~~~~~~~~~~~~~~~~ 158 (476)
......+.. +.. .....+.+++++. +||+||+| ....++..+|+.+|||++.+.+....... +...+...+.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~-~~~~~~~~~~ 149 (402)
T 3ia7_A 73 EDAETQLHLVYVRENVAILRAAEEALGDN--PPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEH-YSLFKELWKS 149 (402)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHTTC--CCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTT-BCHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCcc-cccccccccc
Confidence 222222222 222 2234555666666 89999999 77778899999999999998754321100 0000000000
Q ss_pred CCCCCCcCCccccccccccCCCCcccccCCCCCccccCCCCchHHHHHHHHh----------hcCCC-CcEEEEcchhhc
Q 011832 159 GELPMKAYDEDMDRLITKVPGMETFLRFRDLPSFCRVSDVTDRDLQVLKNAT----------QQSPR-AHALILNTFEDL 227 (476)
Q Consensus 159 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~-~~~~l~~s~~~l 227 (476)
...... . ......+...... ..... .+..+..+.+++
T Consensus 150 ------------------~~~~~~-~-------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~ 197 (402)
T 3ia7_A 150 ------------------NGQRHP-A-------------DVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSF 197 (402)
T ss_dssp ------------------HTCCCG-G-------------GSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGG
T ss_pred ------------------ccccCh-h-------------hHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHh
Confidence 000000 0 0000000000000 00112 377888888888
Q ss_pred chHHHHHHHhhCC-CeeeeCCCcccccccccccccccccccccCCccccchhhhhhhcCCCCCeEEEEEeccccccCHHH
Q 011832 228 EEPILSHIRTKCP-KVYTIGPLHLQLKTRFASNMISSSSQKSLNSLWEVDRSCIEWLGKQPVRSVLYVSFGSITLLKREQ 306 (476)
Q Consensus 228 ~~~~l~~~~~~~p-~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~Gs~~~~~~~~ 306 (476)
+++ ...++ ++.++|++..... +..+|....+++++||+++||......+.
T Consensus 198 ~~~-----~~~~~~~~~~vGp~~~~~~------------------------~~~~~~~~~~~~~~v~v~~G~~~~~~~~~ 248 (402)
T 3ia7_A 198 QPF-----AETFDERFAFVGPTLTGRD------------------------GQPGWQPPRPDAPVLLVSLGNQFNEHPEF 248 (402)
T ss_dssp STT-----GGGCCTTEEECCCCCCC----------------------------CCCCCSSTTCCEEEEECCSCSSCCHHH
T ss_pred CCc-----cccCCCCeEEeCCCCCCcc------------------------cCCCCcccCCCCCEEEEECCCCCcchHHH
Confidence 876 55554 8999998764322 11235444456789999999998667778
Q ss_pred HHHHHHHHHhcCCceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccChHHHhhcccccccccccCchhHHHHHhhCCc
Q 011832 307 LIEFWHGLVDSKQRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQEEVLAHQAVAGFLTHSGWNSTLESIVAGVP 386 (476)
Q Consensus 307 ~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HGG~~s~~eal~~GvP 386 (476)
+..+++++...+.+++|.++.+... +.+ ..+++|+.+.+|+|+.++|+++++ +|||||.||+.||+++|+|
T Consensus 249 ~~~~~~~~~~~~~~~~~~~g~~~~~------~~~-~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P 319 (402)
T 3ia7_A 249 FRACAQAFADTPWHVVMAIGGFLDP------AVL-GPLPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVP 319 (402)
T ss_dssp HHHHHHHHTTSSCEEEEECCTTSCG------GGG-CSCCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCC
T ss_pred HHHHHHHHhcCCcEEEEEeCCcCCh------hhh-CCCCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCC
Confidence 8899999998888888887754111 111 236789999999999999999998 9999999999999999999
Q ss_pred eeccCC-cccchhhHHHHHhhhcceeeccc-ccCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHH
Q 011832 387 MICWPY-FADQQINSRFVSEVWNLGLDMKD-VCDRNVVEKMVNDLMVERKEEFMRAADRMATMARTTANEGGPSYCNLDR 464 (476)
Q Consensus 387 ~l~iP~-~~DQ~~na~~v~~~~G~G~~~~~-~~~~~~l~~~i~~~l~~~~~~y~~~a~~~~~~~~~~~~~~g~~~~~~~~ 464 (476)
+|++|. ..||+.||.++ ++.|+|..+.. +++.+.|.++|.++|+| ++++++++++++.+.+ .++..+.++.
T Consensus 320 ~v~~p~~~~~q~~~a~~~-~~~g~g~~~~~~~~~~~~l~~~~~~ll~~--~~~~~~~~~~~~~~~~----~~~~~~~~~~ 392 (402)
T 3ia7_A 320 LVLVPHFATEAAPSAERV-IELGLGSVLRPDQLEPASIREAVERLAAD--SAVRERVRRMQRDILS----SGGPARAADE 392 (402)
T ss_dssp EEECGGGCGGGHHHHHHH-HHTTSEEECCGGGCSHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHT----SCHHHHHHHH
T ss_pred EEEeCCCcccHHHHHHHH-HHcCCEEEccCCCCCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHhh----CChHHHHHHH
Confidence 999999 99999999999 77899999985 78999999999999998 7999999999988665 4544444444
Q ss_pred HHHHH
Q 011832 465 LIDDI 469 (476)
Q Consensus 465 ~i~~~ 469 (476)
+.+.+
T Consensus 393 i~~~~ 397 (402)
T 3ia7_A 393 VEAYL 397 (402)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44433
No 13
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=4.3e-38 Score=311.83 Aligned_cols=354 Identities=14% Similarity=0.128 Sum_probs=243.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhcccccccccCCCCeeEEecCCCC------------
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHERLIRYTDIHDRFLQYSEFQFKTISDGL------------ 75 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~------------ 75 (476)
|||++++.++.||++|+++|+++|+++||+|++++++...+.+...+ +.+..++...
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g-----------~~~~~~~~~~~~~~~~~~~~~~ 69 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTGVG-----------LPAVATTDLPIRHFITTDREGR 69 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTT-----------CCEEESCSSCHHHHHHBCTTSC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHhCC-----------CEEEEeCCcchHHHHhhhcccC
Confidence 79999999999999999999999999999999999865544433332 4555554321
Q ss_pred CCCCCCCCCcHHHHH-HH-H---HhhchHHHHHHHhcCCCCceEEEECCCcchHHHHHHHcCCCeEEEecCchHHHHHHH
Q 011832 76 PADHPRAGDQLMEMF-DS-L---SLNTRPLLKQMLIDTSPPVSCIIGDACMEFVVDVATELEIPVIHFRAISACSFWAYF 150 (476)
Q Consensus 76 ~~~~~~~~~~~~~~~-~~-~---~~~~~~~l~~ll~~~~~~~DlvI~D~~~~~~~~vA~~l~iP~i~~~~~~~~~~~~~~ 150 (476)
+. ...........+ .. + .......+.+++++. +||+||+|.+..++..+|+.+|||++.+...+..
T Consensus 70 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~------ 140 (384)
T 2p6p_A 70 PE-AIPSDPVAQARFTGRWFARMAASSLPRMLDFSRAW--RPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD------ 140 (384)
T ss_dssp BC-CCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC------
T ss_pred cc-ccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhcc--CCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc------
Confidence 10 010100111111 11 1 111233445556665 8999999988778889999999999988643210
Q ss_pred hhhHHHhhCCCCCCcCCccccccccccCCCCcccccCCCCCccccCCCCchHHHHHHHH-hhcCCCCcEEEEcchhhcch
Q 011832 151 SIPEMIQAGELPMKAYDEDMDRLITKVPGMETFLRFRDLPSFCRVSDVTDRDLQVLKNA-TQQSPRAHALILNTFEDLEE 229 (476)
Q Consensus 151 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~s~~~l~~ 229 (476)
.+ ++.. . . .+...+...+. ......++.+++++.+.+++
T Consensus 141 ----------------~~----------~~~~-~--------~-----~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~ 180 (384)
T 2p6p_A 141 ----------------AD----------GIHP-G--------A-----DAELRPELSELGLERLPAPDLFIDICPPSLRP 180 (384)
T ss_dssp ----------------CT----------TTHH-H--------H-----HHHTHHHHHHTTCSSCCCCSEEEECSCGGGSC
T ss_pred ----------------cc----------hhhH-H--------H-----HHHHHHHHHHcCCCCCCCCCeEEEECCHHHCC
Confidence 00 0000 0 0 00000000110 00111267899999998887
Q ss_pred HHHHHHHhhC-CCeeeeCCCcccccccccccccccccccccCCccccchhhhhhhcCCCCCeEEEEEecccccc-----C
Q 011832 230 PILSHIRTKC-PKVYTIGPLHLQLKTRFASNMISSSSQKSLNSLWEVDRSCIEWLGKQPVRSVLYVSFGSITLL-----K 303 (476)
Q Consensus 230 ~~l~~~~~~~-p~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~Gs~~~~-----~ 303 (476)
+ ++.. +++.+++ .. . +.++.+|++..+++++|||++||.... +
T Consensus 181 ~-----~~~~~~~~~~~~-~~---~----------------------~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~ 229 (384)
T 2p6p_A 181 A-----NAAPARMMRHVA-TS---R----------------------QCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRN 229 (384)
T ss_dssp T-----TSCCCEECCCCC-CC---C----------------------CCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCC
T ss_pred C-----CCCCCCceEecC-CC---C----------------------CCCCCchhhcCCCCCEEEEECCCCCcccccccc
Confidence 6 3322 1334442 11 0 112456877645667999999999754 4
Q ss_pred HHHHHHHHHHHHhcCCceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccChHHHhhcccccccccccCchhHHHHHhh
Q 011832 304 REQLIEFWHGLVDSKQRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQEEVLAHQAVAGFLTHSGWNSTLESIVA 383 (476)
Q Consensus 304 ~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HGG~~s~~eal~~ 383 (476)
.+.+..+++++...+.+++|+.+++ ..+.+. .+++|+.+ +|+||.++|+++++ ||||||.||+.||+++
T Consensus 230 ~~~~~~~~~al~~~~~~~~~~~g~~-------~~~~l~-~~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~ 298 (384)
T 2p6p_A 230 FDFLRGLAKDLVRWDVELIVAAPDT-------VAEALR-AEVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSA 298 (384)
T ss_dssp CTTHHHHHHHHHTTTCEEEEECCHH-------HHHHHH-HHCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHT
T ss_pred HHHHHHHHHHHhcCCcEEEEEeCCC-------CHHhhC-CCCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHh
Confidence 5778889999998899999987632 112332 36899999 99999999998888 9999999999999999
Q ss_pred CCceeccCCcccchhhHHHHHhhhcceeeccc-ccCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCChHHHH
Q 011832 384 GVPMICWPYFADQQINSRFVSEVWNLGLDMKD-VCDRNVVEKMVNDLMVERKEEFMRAADRMATMARTTANEGGPSYCNL 462 (476)
Q Consensus 384 GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~~~-~~~~~~l~~~i~~~l~~~~~~y~~~a~~~~~~~~~~~~~~g~~~~~~ 462 (476)
|+|+|++|...||+.||.++ ++.|+|+.++. .++.+.|.++|.++|+| ++|+++++++++.+++ ..+..+.+
T Consensus 299 G~P~v~~p~~~dq~~~a~~~-~~~g~g~~~~~~~~~~~~l~~~i~~ll~~--~~~~~~~~~~~~~~~~----~~~~~~~~ 371 (384)
T 2p6p_A 299 GVPQLLIPKGSVLEAPARRV-ADYGAAIALLPGEDSTEAIADSCQELQAK--DTYARRAQDLSREISG----MPLPATVV 371 (384)
T ss_dssp TCCEEECCCSHHHHHHHHHH-HHHTSEEECCTTCCCHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHT----SCCHHHHH
T ss_pred CCCEEEccCcccchHHHHHH-HHCCCeEecCcCCCCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHh----CCCHHHHH
Confidence 99999999999999999999 77899999874 78999999999999997 7999999999999876 34444444
Q ss_pred HHHHHHHHh
Q 011832 463 DRLIDDIKM 471 (476)
Q Consensus 463 ~~~i~~~~~ 471 (476)
+.|+.+..
T Consensus 372 -~~i~~~~~ 379 (384)
T 2p6p_A 372 -TALEQLAH 379 (384)
T ss_dssp -HHHHHHHH
T ss_pred -HHHHHHhh
Confidence 44455443
No 14
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=4.8e-38 Score=316.20 Aligned_cols=368 Identities=16% Similarity=0.162 Sum_probs=243.7
Q ss_pred CCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhcccccccccCCCCeeEEecCCCCCCCCC
Q 011832 1 MEEKPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHERLIRYTDIHDRFLQYSEFQFKTISDGLPADHP 80 (476)
Q Consensus 1 ~~~~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~ 80 (476)
|+++++.|||++++.++.||++|++.|+++|+++||+|+++++....+.+.+.+ +.+..++...+.+..
T Consensus 1 M~~~m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~~g-----------~~~~~~~~~~~~~~~ 69 (430)
T 2iyf_A 1 MTTQTTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAATG-----------PRPVLYHSTLPGPDA 69 (430)
T ss_dssp -------CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHTTS-----------CEEEECCCCSCCTTS
T ss_pred CCCccccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHhCC-----------CEEEEcCCcCccccc
Confidence 777777789999999999999999999999999999999999976544443332 566676654332211
Q ss_pred C---CCCcHHHHHHHHH---hhchHHHHHHHhcCCCCceEEEECCCcchHHHHHHHcCCCeEEEecCchHHHHHHHhhhH
Q 011832 81 R---AGDQLMEMFDSLS---LNTRPLLKQMLIDTSPPVSCIIGDACMEFVVDVATELEIPVIHFRAISACSFWAYFSIPE 154 (476)
Q Consensus 81 ~---~~~~~~~~~~~~~---~~~~~~l~~ll~~~~~~~DlvI~D~~~~~~~~vA~~l~iP~i~~~~~~~~~~~~~~~~~~ 154 (476)
. ...+....+..+. ......+.+++++. +||+||+|.+..++..+|+.+|||++.+++..............
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~ 147 (430)
T 2iyf_A 70 DPEAWGSTLLDNVEPFLNDAIQALPQLADAYADD--IPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAE 147 (430)
T ss_dssp CGGGGCSSHHHHHHHHHHHHHHHHHHHHHHHTTS--CCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTHH
T ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHHHhhcc--CCCEEEECCccHHHHHHHHHcCCCEEEEeccccccccccccccc
Confidence 0 0112222222221 22234556666665 89999999887788999999999999998764310000000000
Q ss_pred HHhhCCCCCCcCCccccccccccCCCCcccccCCCCCccccCCCCchHHHHHHHH------hhcCCCCcEEEEcchhhcc
Q 011832 155 MIQAGELPMKAYDEDMDRLITKVPGMETFLRFRDLPSFCRVSDVTDRDLQVLKNA------TQQSPRAHALILNTFEDLE 228 (476)
Q Consensus 155 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~s~~~l~ 228 (476)
... . .....+.... + .....+...+. ......++.+++++.+.++
T Consensus 148 ~~~---------~-----~~~~~~~~~~-~--------------~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~ 198 (430)
T 2iyf_A 148 PMW---------R-----EPRQTERGRA-Y--------------YARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQ 198 (430)
T ss_dssp HHH---------H-----HHHHSHHHHH-H--------------HHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGS
T ss_pred chh---------h-----hhccchHHHH-H--------------HHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhC
Confidence 000 0 0000000000 0 00000000000 0011146789999999988
Q ss_pred hHHHHHHHhhCCC-eeeeCCCcccccccccccccccccccccCCccccchhhhhhhcCCCCCeEEEEEeccccccCHHHH
Q 011832 229 EPILSHIRTKCPK-VYTIGPLHLQLKTRFASNMISSSSQKSLNSLWEVDRSCIEWLGKQPVRSVLYVSFGSITLLKREQL 307 (476)
Q Consensus 229 ~~~l~~~~~~~p~-~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~Gs~~~~~~~~~ 307 (476)
++. ++..++ +++||+...... +..+|....+++++||+++||......+.+
T Consensus 199 ~~~----~~~~~~~v~~vG~~~~~~~------------------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~ 250 (430)
T 2iyf_A 199 PHA----DRVDEDVYTFVGACQGDRA------------------------EEGGWQRPAGAEKVVLVSLGSAFTKQPAFY 250 (430)
T ss_dssp TTG----GGSCTTTEEECCCCC-----------------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHH
T ss_pred CCc----ccCCCccEEEeCCcCCCCC------------------------CCCCCccccCCCCeEEEEcCCCCCCcHHHH
Confidence 762 233457 999998653211 012344434467899999999985567888
Q ss_pred HHHHHHHHhc-CCceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccChHHHhhcccccccccccCchhHHHHHhhCCc
Q 011832 308 IEFWHGLVDS-KQRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQEEVLAHQAVAGFLTHSGWNSTLESIVAGVP 386 (476)
Q Consensus 308 ~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HGG~~s~~eal~~GvP 386 (476)
..++++++.. +.+++|.++.+... +.+ ..+++|+.+.+|+||.++|+++++ ||+|||+||+.||+++|+|
T Consensus 251 ~~~~~~l~~~~~~~~~~~~G~~~~~------~~l-~~~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P 321 (430)
T 2iyf_A 251 RECVRAFGNLPGWHLVLQIGRKVTP------AEL-GELPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATP 321 (430)
T ss_dssp HHHHHHHTTCTTEEEEEECC---CG------GGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCC
T ss_pred HHHHHHHhcCCCeEEEEEeCCCCCh------HHh-ccCCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCC
Confidence 8899999886 77888887654211 111 236789999999999999999998 9999999999999999999
Q ss_pred eeccCCcccchhhHHHHHhhhcceeeccc-ccCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHH
Q 011832 387 MICWPYFADQQINSRFVSEVWNLGLDMKD-VCDRNVVEKMVNDLMVERKEEFMRAADRMATMART 450 (476)
Q Consensus 387 ~l~iP~~~DQ~~na~~v~~~~G~G~~~~~-~~~~~~l~~~i~~~l~~~~~~y~~~a~~~~~~~~~ 450 (476)
+|++|..+||..|++++ ++.|+|+.+.. .++.+.|.++|.++|+| +.+++++.++++.+.+
T Consensus 322 ~i~~p~~~~q~~~a~~~-~~~g~g~~~~~~~~~~~~l~~~i~~ll~~--~~~~~~~~~~~~~~~~ 383 (430)
T 2iyf_A 322 MIAVPQAVDQFGNADML-QGLGVARKLATEEATADLLRETALALVDD--PEVARRLRRIQAEMAQ 383 (430)
T ss_dssp EEECCCSHHHHHHHHHH-HHTTSEEECCCC-CCHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHH
T ss_pred EEECCCccchHHHHHHH-HHcCCEEEcCCCCCCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHh
Confidence 99999999999999999 67899999974 78999999999999997 7899999999888766
No 15
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=4.7e-38 Score=317.21 Aligned_cols=375 Identities=13% Similarity=0.099 Sum_probs=238.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhcccccccccCCCCeeEEecCCCCCC-CC----
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHERLIRYTDIHDRFLQYSEFQFKTISDGLPA-DH---- 79 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~-~~---- 79 (476)
...|||+|++.++.||++|+++||++|+++||+|+|++++...+.+.+.+ +.+..++..... +.
T Consensus 18 ~~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~~G-----------~~~~~i~~~~~~~~~~~~~ 86 (441)
T 2yjn_A 18 GSHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAAG-----------LTAVPVGTDVDLVDFMTHA 86 (441)
T ss_dssp -CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHTTT-----------CCEEECSCCCCHHHHHHHT
T ss_pred CCccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHhCC-----------CceeecCCccchHHHhhhh
Confidence 34689999999999999999999999999999999999976544444433 566666533210 00
Q ss_pred ----------CC-----CC-CcHH---HHHHHHHhh----c-hH-HHHH---HHhcCCCCceEEEECCCcchHHHHHHHc
Q 011832 80 ----------PR-----AG-DQLM---EMFDSLSLN----T-RP-LLKQ---MLIDTSPPVSCIIGDACMEFVVDVATEL 131 (476)
Q Consensus 80 ----------~~-----~~-~~~~---~~~~~~~~~----~-~~-~l~~---ll~~~~~~~DlvI~D~~~~~~~~vA~~l 131 (476)
.+ .. .... ..+..+... . .. .+.+ ++++. +||+||+|....++..+|+.+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pDlVv~d~~~~~~~~aA~~l 164 (441)
T 2yjn_A 87 GHDIIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKW--RPDLVIWEPLTFAAPIAAAVT 164 (441)
T ss_dssp THHHHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHH--CCSEEEECTTCTHHHHHHHHH
T ss_pred hcccccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhc--CCCEEEecCcchhHHHHHHHc
Confidence 00 00 0111 111112110 1 12 3444 44455 899999999878899999999
Q ss_pred CCCeEEEecCchHHHHHHHhhhHHHhhCCCCCCcCCccccccccccCCCCcccccCCCCCccccCCCCchHHHHHHHHhh
Q 011832 132 EIPVIHFRAISACSFWAYFSIPEMIQAGELPMKAYDEDMDRLITKVPGMETFLRFRDLPSFCRVSDVTDRDLQVLKNATQ 211 (476)
Q Consensus 132 ~iP~i~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (476)
|||++.+...+.........+.. ...+.|.. ...+ ...+...+.......
T Consensus 165 giP~v~~~~~~~~~~~~~~~~~~--~~~~~~~~--------------~~~~--------------~~~~~l~~~~~~~g~ 214 (441)
T 2yjn_A 165 GTPHARLLWGPDITTRARQNFLG--LLPDQPEE--------------HRED--------------PLAEWLTWTLEKYGG 214 (441)
T ss_dssp TCCEEEECSSCCHHHHHHHHHHH--HGGGSCTT--------------TCCC--------------HHHHHHHHHHHHTTC
T ss_pred CCCEEEEecCCCcchhhhhhhhh--hccccccc--------------cccc--------------hHHHHHHHHHHHcCC
Confidence 99999997654332111110000 01111100 0000 000001111111000
Q ss_pred -c----CCCCcEEEEcchhhcchHHHHHHHhhCCCeeeeCCCcccccccccccccccccccccCCccccchhhhhhhcCC
Q 011832 212 -Q----SPRAHALILNTFEDLEEPILSHIRTKCPKVYTIGPLHLQLKTRFASNMISSSSQKSLNSLWEVDRSCIEWLGKQ 286 (476)
Q Consensus 212 -~----~~~~~~~l~~s~~~l~~~~l~~~~~~~p~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 286 (476)
. ....+.++.++.+.++++ .. ++. ..+++.... ...++.+|++..
T Consensus 215 ~~~~~~~~~~~~~l~~~~~~~~~~-----~~-~~~-~~~~~~~~~-----------------------~~~~~~~~l~~~ 264 (441)
T 2yjn_A 215 PAFDEEVVVGQWTIDPAPAAIRLD-----TG-LKT-VGMRYVDYN-----------------------GPSVVPEWLHDE 264 (441)
T ss_dssp CCCCGGGTSCSSEEECSCGGGSCC-----CC-CCE-EECCCCCCC-----------------------SSCCCCGGGSSC
T ss_pred CCCCccccCCCeEEEecCccccCC-----CC-CCC-CceeeeCCC-----------------------CCcccchHhhcC
Confidence 0 012455666666665543 11 221 112221110 112245788765
Q ss_pred CCCeEEEEEecccccc---CHHHHHHHHHHHHhcCCceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccChHHHhhcc
Q 011832 287 PVRSVLYVSFGSITLL---KREQLIEFWHGLVDSKQRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQEEVLAHQ 363 (476)
Q Consensus 287 ~~~~~I~vs~Gs~~~~---~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq~~lL~~~ 363 (476)
+++++|||++||.... ..+.+..+++++...+.+++|+.++.... .+ ..+++|+.+.+|+||.++|+.+
T Consensus 265 ~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~-------~l-~~~~~~v~~~~~~~~~~ll~~a 336 (441)
T 2yjn_A 265 PERRRVCLTLGISSRENSIGQVSIEELLGAVGDVDAEIIATFDAQQLE-------GV-ANIPDNVRTVGFVPMHALLPTC 336 (441)
T ss_dssp CSSCEEEEEC----------CCSTTTTHHHHHTSSSEEEECCCTTTTS-------SC-SSCCSSEEECCSCCHHHHGGGC
T ss_pred CCCCEEEEECCCCcccccChHHHHHHHHHHHHcCCCEEEEEECCcchh-------hh-ccCCCCEEEecCCCHHHHHhhC
Confidence 6678999999998743 34567778899998899999998754211 11 1357899999999999999888
Q ss_pred cccccccccCchhHHHHHhhCCceeccCCcccchhhHHHHHhhhcceeeccc-ccCHHHHHHHHHHHHhHhHHHHHHHHH
Q 011832 364 AVAGFLTHSGWNSTLESIVAGVPMICWPYFADQQINSRFVSEVWNLGLDMKD-VCDRNVVEKMVNDLMVERKEEFMRAAD 442 (476)
Q Consensus 364 ~~~~~I~HGG~~s~~eal~~GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~~~-~~~~~~l~~~i~~~l~~~~~~y~~~a~ 442 (476)
++ ||||||.||+.||+++|||+|++|...||+.||+++ ++.|+|+.++. +++.+.|.++|.++|+| ++|+++++
T Consensus 337 d~--~V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l-~~~g~g~~~~~~~~~~~~l~~~i~~ll~~--~~~~~~~~ 411 (441)
T 2yjn_A 337 AA--TVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRT-QEFGAGIALPVPELTPDQLRESVKRVLDD--PAHRAGAA 411 (441)
T ss_dssp SE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHH-HHHTSEEECCTTTCCHHHHHHHHHHHHHC--HHHHHHHH
T ss_pred CE--EEECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHH-HHcCCEEEcccccCCHHHHHHHHHHHhcC--HHHHHHHH
Confidence 88 999999999999999999999999999999999999 77899999985 78999999999999998 79999999
Q ss_pred HHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 011832 443 RMATMARTTANEGGPSYCNLDRLIDDIK 470 (476)
Q Consensus 443 ~~~~~~~~~~~~~g~~~~~~~~~i~~~~ 470 (476)
++++.+++ ..+. ..+.+.|+.+.
T Consensus 412 ~~~~~~~~----~~~~-~~~~~~i~~~~ 434 (441)
T 2yjn_A 412 RMRDDMLA----EPSP-AEVVGICEELA 434 (441)
T ss_dssp HHHHHHHT----SCCH-HHHHHHHHHHH
T ss_pred HHHHHHHc----CCCH-HHHHHHHHHHH
Confidence 99998765 3443 44444455443
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=4.1e-36 Score=299.05 Aligned_cols=346 Identities=15% Similarity=0.112 Sum_probs=219.2
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhcccccccccCCCCeeEEecCCCCC-------
Q 011832 4 KPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHERLIRYTDIHDRFLQYSEFQFKTISDGLP------- 76 (476)
Q Consensus 4 ~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~------- 76 (476)
.+.+|||+|++.++.||++|++.|+++|.++||+|++++++...+.+...+ +.+..++....
T Consensus 12 ~~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~G-----------~~~~~~~~~~~~~~~~~~ 80 (398)
T 4fzr_A 12 RGSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGAG-----------LPFAPTCPSLDMPEVLSW 80 (398)
T ss_dssp ---CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHTT-----------CCEEEEESSCCHHHHHSB
T ss_pred CCCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhCC-----------CeeEecCCccchHhhhhh
Confidence 355799999999999999999999999999999999999866555554443 34444431100
Q ss_pred --CCC-CCCCCcHH-------HHHHHHHhhchHHHHHHHhcCCCCceEEEECCCcchHHHHHHHcCCCeEEEecCchHHH
Q 011832 77 --ADH-PRAGDQLM-------EMFDSLSLNTRPLLKQMLIDTSPPVSCIIGDACMEFVVDVATELEIPVIHFRAISACSF 146 (476)
Q Consensus 77 --~~~-~~~~~~~~-------~~~~~~~~~~~~~l~~ll~~~~~~~DlvI~D~~~~~~~~vA~~l~iP~i~~~~~~~~~~ 146 (476)
.+. ........ ..+..........+.+++++. +||+|++|...+++..+|+.+|||++.+........
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~ 158 (398)
T 4fzr_A 81 DREGNRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAERW--KPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPE 158 (398)
T ss_dssp CTTSCBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCH
T ss_pred hccCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCCEEEECccccHHHHHHHhhCCCEEEeccCCCCch
Confidence 000 00001111 111122222234555666666 899999998777889999999999999876532111
Q ss_pred HHHHhhhHHHhhCCCCCCcCCccccccccccCCCCcccccCCCCCccccCCCCchHHHHHHHHhhcCCCCcEEEEcchhh
Q 011832 147 WAYFSIPEMIQAGELPMKAYDEDMDRLITKVPGMETFLRFRDLPSFCRVSDVTDRDLQVLKNATQQSPRAHALILNTFED 226 (476)
Q Consensus 147 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~ 226 (476)
........ ++... +.... .......+..+....+.
T Consensus 159 ~~~~~~~~---------------------~l~~~---~~~~~---------------------~~~~~~~~~~~~~~~~~ 193 (398)
T 4fzr_A 159 LIKSAGVG---------------------ELAPE---LAELG---------------------LTDFPDPLLSIDVCPPS 193 (398)
T ss_dssp HHHHHHHH---------------------HTHHH---HHTTT---------------------CSSCCCCSEEEECSCGG
T ss_pred hhhHHHHH---------------------HHHHH---HHHcC---------------------CCCCCCCCeEEEeCChh
Confidence 00000000 00000 00000 00012335566666666
Q ss_pred cchHHHHHHHhhCC-CeeeeCCCcccccccccccccccccccccCCccccchhhhhhhcCCCCCeEEEEEecccccc---
Q 011832 227 LEEPILSHIRTKCP-KVYTIGPLHLQLKTRFASNMISSSSQKSLNSLWEVDRSCIEWLGKQPVRSVLYVSFGSITLL--- 302 (476)
Q Consensus 227 l~~~~l~~~~~~~p-~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~Gs~~~~--- 302 (476)
++.+ ..... ++.+++.-. ...++.+|+...+++++||+++||....
T Consensus 194 ~~~~-----~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~ 243 (398)
T 4fzr_A 194 MEAQ-----PKPGTTKMRYVPYNG-------------------------RNDQVPSWVFEERKQPRLCLTFGTRVPLPNT 243 (398)
T ss_dssp GC---------CCCEECCCCCCCC-------------------------SSCCCCHHHHSCCSSCEEECC----------
T ss_pred hCCC-----CCCCCCCeeeeCCCC-------------------------CCCCCchhhhcCCCCCEEEEEccCccccccc
Confidence 5544 11111 122222110 0122345665545678999999999632
Q ss_pred -----CHHHHHHHHHHHHhcCCceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccChHHHhhcccccccccccCchhH
Q 011832 303 -----KREQLIEFWHGLVDSKQRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQEEVLAHQAVAGFLTHSGWNST 377 (476)
Q Consensus 303 -----~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HGG~~s~ 377 (476)
..+.+..+++++...+.+++|+.++... +.+ ..+++|+.+.+|+|+.++|+++++ ||||||.||+
T Consensus 244 ~~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~-------~~l-~~~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~ 313 (398)
T 4fzr_A 244 NTIPGGLSLLQALSQELPKLGFEVVVAVSDKLA-------QTL-QPLPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTT 313 (398)
T ss_dssp ------CCSHHHHHHHGGGGTCEEEECCCC----------------CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHH
T ss_pred ccccchHHHHHHHHHHHHhCCCEEEEEeCCcch-------hhh-ccCCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHH
Confidence 3466888999999999999998875421 222 246899999999999999999998 9999999999
Q ss_pred HHHHhhCCceeccCCcccchhhHHHHHhhhcceeeccc-ccCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHH
Q 011832 378 LESIVAGVPMICWPYFADQQINSRFVSEVWNLGLDMKD-VCDRNVVEKMVNDLMVERKEEFMRAADRMATMART 450 (476)
Q Consensus 378 ~eal~~GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~~~-~~~~~~l~~~i~~~l~~~~~~y~~~a~~~~~~~~~ 450 (476)
.||+++|+|+|++|...||..|+.++ ++.|+|+.++. +++.+.|.++|.++|+| ++|++++++.++.+.+
T Consensus 314 ~Ea~~~G~P~v~~p~~~~q~~~a~~~-~~~g~g~~~~~~~~~~~~l~~ai~~ll~~--~~~~~~~~~~~~~~~~ 384 (398)
T 4fzr_A 314 LTCLSEGVPQVSVPVIAEVWDSARLL-HAAGAGVEVPWEQAGVESVLAACARIRDD--SSYVGNARRLAAEMAT 384 (398)
T ss_dssp HHHHHTTCCEEECCCSGGGHHHHHHH-HHTTSEEECC-------CHHHHHHHHHHC--THHHHHHHHHHHHHTT
T ss_pred HHHHHhCCCEEecCCchhHHHHHHHH-HHcCCEEecCcccCCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999 77899999984 78999999999999998 8999999999988655
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=1e-34 Score=289.00 Aligned_cols=351 Identities=14% Similarity=0.110 Sum_probs=239.3
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhcccccccccCCCCeeEEecCCCCCC--------
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHERLIRYTDIHDRFLQYSEFQFKTISDGLPA-------- 77 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~-------- 77 (476)
+.|||+|++.++.||++|++.|+++|.++||+|+++++ ...+.+...+ +.+..++.....
T Consensus 19 ~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~~G-----------~~~~~~~~~~~~~~~~~~~~ 86 (398)
T 3oti_A 19 RHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAAAG-----------LEVVDVAPDYSAVKVFEQVA 86 (398)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHTTT-----------CEEEESSTTCCHHHHHHHHH
T ss_pred hcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHhCC-----------CeeEecCCccCHHHHhhhcc
Confidence 45899999999999999999999999999999999998 6555554443 566666532100
Q ss_pred ------------CCCCCCCcHHHHHHHHHhhchHHHHHHHhcCCCCceEEEECCCcchHHHHHHHcCCCeEEEecCchHH
Q 011832 78 ------------DHPRAGDQLMEMFDSLSLNTRPLLKQMLIDTSPPVSCIIGDACMEFVVDVATELEIPVIHFRAISACS 145 (476)
Q Consensus 78 ------------~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~DlvI~D~~~~~~~~vA~~l~iP~i~~~~~~~~~ 145 (476)
............+..........+.+++++. +||+||+|...+++..+|+.+|||++.+.......
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~~ 164 (398)
T 3oti_A 87 KDNPRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDY--RPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWRT 164 (398)
T ss_dssp HHCHHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCCC
T ss_pred cCCccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHc--CCCEEEECchhhHHHHHHHHcCCCEEEEeccCCCc
Confidence 0011122233444444444556677778777 89999999888888999999999999875432100
Q ss_pred HHHHHhhhHHHhhCCCCCCcCCccccccccccCCCCcccccCCCCCccccCCCCchHHHHHHHHhhcCCCCcEEEEcchh
Q 011832 146 FWAYFSIPEMIQAGELPMKAYDEDMDRLITKVPGMETFLRFRDLPSFCRVSDVTDRDLQVLKNATQQSPRAHALILNTFE 225 (476)
Q Consensus 146 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~ 225 (476)
... .. .... .......+........+..+....+
T Consensus 165 ~~~----~~---------------------~~~~---------------------~l~~~~~~~~~~~~~~~~~~~~~~~ 198 (398)
T 3oti_A 165 RGM----HR---------------------SIAS---------------------FLTDLMDKHQVSLPEPVATIESFPP 198 (398)
T ss_dssp TTH----HH---------------------HHHT---------------------TCHHHHHHTTCCCCCCSEEECSSCG
T ss_pred cch----hh---------------------HHHH---------------------HHHHHHHHcCCCCCCCCeEEEeCCH
Confidence 000 00 0000 0000011100001233555555555
Q ss_pred hcchHHHHHHHhhCC-CeeeeCCCcccccccccccccccccccccCCccccchhhhhhhcCCCCCeEEEEEecccccc--
Q 011832 226 DLEEPILSHIRTKCP-KVYTIGPLHLQLKTRFASNMISSSSQKSLNSLWEVDRSCIEWLGKQPVRSVLYVSFGSITLL-- 302 (476)
Q Consensus 226 ~l~~~~l~~~~~~~p-~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~Gs~~~~-- 302 (476)
.+..+ ..... .+.++. . . . .....+|+...+++++||+++||....
T Consensus 199 ~~~~~-----~~~~~~~~~~~~-~--~-~----------------------~~~~~~~~~~~~~~~~v~v~~G~~~~~~~ 247 (398)
T 3oti_A 199 SLLLE-----AEPEGWFMRWVP-Y--G-G----------------------GAVLGDRLPPVPARPEVAITMGTIELQAF 247 (398)
T ss_dssp GGGTT-----SCCCSBCCCCCC-C--C-C----------------------CEECCSSCCCCCSSCEEEECCTTTHHHHH
T ss_pred HHCCC-----CCCCCCCccccC-C--C-C----------------------CcCCchhhhcCCCCCEEEEEcCCCccccC
Confidence 55433 10000 111211 0 0 0 111334665555678999999999642
Q ss_pred CHHHHHHHHHHHHhcCCceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccChHHHhhcccccccccccCchhHHHHHh
Q 011832 303 KREQLIEFWHGLVDSKQRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQEEVLAHQAVAGFLTHSGWNSTLESIV 382 (476)
Q Consensus 303 ~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HGG~~s~~eal~ 382 (476)
..+.+..+++++...+.+++|+.++... +.+ ..+++|+.+.+|+|+.++|+++++ ||||||.||+.||++
T Consensus 248 ~~~~~~~~~~~l~~~~~~~v~~~g~~~~-------~~l-~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~ 317 (398)
T 3oti_A 248 GIGAVEPIIAAAGEVDADFVLALGDLDI-------SPL-GTLPRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAID 317 (398)
T ss_dssp CGGGHHHHHHHHHTSSSEEEEECTTSCC-------GGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCEEEEEECCcCh-------hhh-ccCCCcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHH
Confidence 6677888999999889999999876531 111 236889999999999999999998 999999999999999
Q ss_pred hCCceeccCCcccchhhH--HHHHhhhcceeeccc-ccCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCChH
Q 011832 383 AGVPMICWPYFADQQINS--RFVSEVWNLGLDMKD-VCDRNVVEKMVNDLMVERKEEFMRAADRMATMARTTANEGGPSY 459 (476)
Q Consensus 383 ~GvP~l~iP~~~DQ~~na--~~v~~~~G~G~~~~~-~~~~~~l~~~i~~~l~~~~~~y~~~a~~~~~~~~~~~~~~g~~~ 459 (476)
+|+|+|++|...||..|| .++ ++.|+|+.++. +++.+.|. ++|+| +.|+++++++++.+.+ ..+ .
T Consensus 318 ~G~P~v~~p~~~dq~~~a~~~~~-~~~g~g~~~~~~~~~~~~l~----~ll~~--~~~~~~~~~~~~~~~~----~~~-~ 385 (398)
T 3oti_A 318 AGIPQLLAPDPRDQFQHTAREAV-SRRGIGLVSTSDKVDADLLR----RLIGD--ESLRTAAREVREEMVA----LPT-P 385 (398)
T ss_dssp HTCCEEECCCTTCCSSCTTHHHH-HHHTSEEECCGGGCCHHHHH----HHHHC--HHHHHHHHHHHHHHHT----SCC-H
T ss_pred hCCCEEEcCCCchhHHHHHHHHH-HHCCCEEeeCCCCCCHHHHH----HHHcC--HHHHHHHHHHHHHHHh----CCC-H
Confidence 999999999999999999 999 78899999985 77888777 78887 8999999999999765 344 3
Q ss_pred HHHHHHHHHH
Q 011832 460 CNLDRLIDDI 469 (476)
Q Consensus 460 ~~~~~~i~~~ 469 (476)
..+.+.|+.+
T Consensus 386 ~~~~~~l~~l 395 (398)
T 3oti_A 386 AETVRRIVER 395 (398)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4444455544
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=1.8e-33 Score=279.15 Aligned_cols=355 Identities=14% Similarity=0.165 Sum_probs=234.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhcccccccccCCCCeeEEec-CCC----------C
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHERLIRYTDIHDRFLQYSEFQFKTI-SDG----------L 75 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l-~~~----------~ 75 (476)
+|||+|++.++.||++|++.|+++|.++||+|++++++...+.+...+ +.+..+ ... .
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~g-----------~~~~~~~~~~~~~~~~~~~~~ 69 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGAG-----------LTTAGIRGNDRTGDTGGTTQL 69 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHHBT-----------CEEEEC--------------C
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHhCC-----------CceeeecCCccchhhhhhhcc
Confidence 589999999999999999999999999999999999865545444444 333333 110 0
Q ss_pred CCC----CCCCCCcHHHHHHHHHhhc-------hHHHHHHHhcCCCCceEEEECCCcchHHHHHHHcCCCeEEEecCchH
Q 011832 76 PAD----HPRAGDQLMEMFDSLSLNT-------RPLLKQMLIDTSPPVSCIIGDACMEFVVDVATELEIPVIHFRAISAC 144 (476)
Q Consensus 76 ~~~----~~~~~~~~~~~~~~~~~~~-------~~~l~~ll~~~~~~~DlvI~D~~~~~~~~vA~~l~iP~i~~~~~~~~ 144 (476)
+.. ...........+......+ ...+.+++++. +||+||+|...+++..+|+.+|||++.+......
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~ 147 (391)
T 3tsa_A 70 RFPNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAW--RPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDP 147 (391)
T ss_dssp CSCCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCC
T ss_pred cccccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhc--CCCEEEeCcchhHHHHHHHHhCCCEEEEecCCcc
Confidence 000 0000011222222222222 34556667776 8999999987778888999999999998654321
Q ss_pred HHHHHHhhhHHHhhCCCCCCcCCccccccccccCCCCcccccCCCCCccccCCCCchHHHHHHHH-hhcCCCCcEEEEcc
Q 011832 145 SFWAYFSIPEMIQAGELPMKAYDEDMDRLITKVPGMETFLRFRDLPSFCRVSDVTDRDLQVLKNA-TQQSPRAHALILNT 223 (476)
Q Consensus 145 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~s 223 (476)
....... .. .....+...+. .......+.++..+
T Consensus 148 ~~~~~~~---------------------------~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (391)
T 3tsa_A 148 TAGPFSD---------------------------RA------------------HELLDPVCRHHGLTGLPTPELILDPC 182 (391)
T ss_dssp TTTHHHH---------------------------HH------------------HHHHHHHHHHTTSSSSCCCSEEEECS
T ss_pred ccccccc---------------------------hH------------------HHHHHHHHHHcCCCCCCCCceEEEec
Confidence 0000000 00 00000000000 01112235666666
Q ss_pred hhhcchHHHHHHHhhCC-CeeeeCCCcccccccccccccccccccccCCccccchhhhhhhcCCCCCeEEEEEeccccc-
Q 011832 224 FEDLEEPILSHIRTKCP-KVYTIGPLHLQLKTRFASNMISSSSQKSLNSLWEVDRSCIEWLGKQPVRSVLYVSFGSITL- 301 (476)
Q Consensus 224 ~~~l~~~~l~~~~~~~p-~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~Gs~~~- 301 (476)
.++++.+ ..... .+.+++ .. . .....+|+...+++++|++++||...
T Consensus 183 ~~~~~~~-----~~~~~~~~~~~p-~~---~----------------------~~~~~~~~~~~~~~~~vlv~~G~~~~~ 231 (391)
T 3tsa_A 183 PPSLQAS-----DAPQGAPVQYVP-YN---G----------------------SGAFPAWGAARTSARRVCICMGRMVLN 231 (391)
T ss_dssp CGGGSCT-----TSCCCEECCCCC-CC---C----------------------CEECCGGGSSCCSSEEEEEECCHHHHH
T ss_pred ChhhcCC-----CCCccCCeeeec-CC---C----------------------CcCCCchhhcCCCCCEEEEEcCCCCCc
Confidence 6665544 21111 222331 11 0 11123566555567899999999952
Q ss_pred -cC-HHHHHHHHHHHHhc-CCceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccChHHHhhcccccccccccCchhHH
Q 011832 302 -LK-REQLIEFWHGLVDS-KQRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQEEVLAHQAVAGFLTHSGWNSTL 378 (476)
Q Consensus 302 -~~-~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HGG~~s~~ 378 (476)
.. .+.+..++++ +.. +.+++|..++... +.+ ..+++|+.+.+|+|+.++|+++++ ||||||.||+.
T Consensus 232 ~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~~~-------~~l-~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~ 300 (391)
T 3tsa_A 232 ATGPAPLLRAVAAA-TELPGVEAVIAVPPEHR-------ALL-TDLPDNARIAESVPLNLFLRTCEL--VICAGGSGTAF 300 (391)
T ss_dssp HHCSHHHHHHHHHH-HTSTTEEEEEECCGGGG-------GGC-TTCCTTEEECCSCCGGGTGGGCSE--EEECCCHHHHH
T ss_pred ccchHHHHHHHHHh-ccCCCeEEEEEECCcch-------hhc-ccCCCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHH
Confidence 33 7778888888 877 6788888764411 111 136789999999999999988888 99999999999
Q ss_pred HHHhhCCceeccCCcccchhhHHHHHhhhcceeeccc---ccCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcC
Q 011832 379 ESIVAGVPMICWPYFADQQINSRFVSEVWNLGLDMKD---VCDRNVVEKMVNDLMVERKEEFMRAADRMATMARTTANEG 455 (476)
Q Consensus 379 eal~~GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~~~---~~~~~~l~~~i~~~l~~~~~~y~~~a~~~~~~~~~~~~~~ 455 (476)
||+++|+|+|++|...||..|+.++ ++.|+|..+.. ..+.+.|.++|.++|+| ++|+++++++++.+.+ .
T Consensus 301 Ea~~~G~P~v~~p~~~~q~~~a~~~-~~~g~g~~~~~~~~~~~~~~l~~ai~~ll~~--~~~~~~~~~~~~~~~~----~ 373 (391)
T 3tsa_A 301 TATRLGIPQLVLPQYFDQFDYARNL-AAAGAGICLPDEQAQSDHEQFTDSIATVLGD--TGFAAAAIKLSDEITA----M 373 (391)
T ss_dssp HHHHTTCCEEECCCSTTHHHHHHHH-HHTTSEEECCSHHHHTCHHHHHHHHHHHHTC--THHHHHHHHHHHHHHT----S
T ss_pred HHHHhCCCEEecCCcccHHHHHHHH-HHcCCEEecCcccccCCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHc----C
Confidence 9999999999999999999999999 77899999874 47999999999999998 8999999999888654 4
Q ss_pred CChHHHHHHHHHHH
Q 011832 456 GPSYCNLDRLIDDI 469 (476)
Q Consensus 456 g~~~~~~~~~i~~~ 469 (476)
.+..+ +.+.|+.+
T Consensus 374 ~~~~~-~~~~i~~~ 386 (391)
T 3tsa_A 374 PHPAA-LVRTLENT 386 (391)
T ss_dssp CCHHH-HHHHHHHC
T ss_pred CCHHH-HHHHHHHH
Confidence 54444 44444443
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=6.4e-31 Score=262.64 Aligned_cols=367 Identities=19% Similarity=0.176 Sum_probs=240.8
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhcccccccccCCCCeeEEecCCC---------
Q 011832 4 KPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHERLIRYTDIHDRFLQYSEFQFKTISDG--------- 74 (476)
Q Consensus 4 ~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~--------- 74 (476)
...+|||++++.++.||++|+++|+++|.++||+|++++++...+.+...+ +.+..++..
T Consensus 17 ~~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~g-----------~~~~~~~~~~~~~~~~~~ 85 (412)
T 3otg_A 17 EGRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRKLG-----------FEPVATGMPVFDGFLAAL 85 (412)
T ss_dssp -CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHTT-----------CEEEECCCCHHHHHHHHH
T ss_pred ccceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHhcC-----------CceeecCcccccchhhhh
Confidence 456799999999999999999999999999999999999865433333332 556655420
Q ss_pred --------CCCC-CCCCCCcHHHHHHHH-HhhchHHHHHHHhcCCCCceEEEECCCcchHHHHHHHcCCCeEEEecCchH
Q 011832 75 --------LPAD-HPRAGDQLMEMFDSL-SLNTRPLLKQMLIDTSPPVSCIIGDACMEFVVDVATELEIPVIHFRAISAC 144 (476)
Q Consensus 75 --------~~~~-~~~~~~~~~~~~~~~-~~~~~~~l~~ll~~~~~~~DlvI~D~~~~~~~~vA~~l~iP~i~~~~~~~~ 144 (476)
.+.. ...........+... .......+.+++++. +||+||+|....++..+|+.+|||++........
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~ 163 (412)
T 3otg_A 86 RIRFDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERL--RPDLVVQEISNYGAGLAALKAGIPTICHGVGRDT 163 (412)
T ss_dssp HHHHSCSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCC
T ss_pred hhhhcccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhc--CCCEEEECchhhHHHHHHHHcCCCEEEecccccC
Confidence 0000 000011122222222 222235566777777 8999999987777888999999999987554321
Q ss_pred HHHHHHhhhHHHhhCCCCCCcCCccccccccccCCCCcccccCCCCCccccCCCCchHHHHHHHHhhcCCCCcEEEEcch
Q 011832 145 SFWAYFSIPEMIQAGELPMKAYDEDMDRLITKVPGMETFLRFRDLPSFCRVSDVTDRDLQVLKNATQQSPRAHALILNTF 224 (476)
Q Consensus 145 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~ 224 (476)
........... +.++ .....+..... .....++.++..+.
T Consensus 164 ~~~~~~~~~~~---------------------~~~~---~~~~g~~~~~~----------------~~~~~~d~~i~~~~ 203 (412)
T 3otg_A 164 PDDLTRSIEEE---------------------VRGL---AQRLGLDLPPG----------------RIDGFGNPFIDIFP 203 (412)
T ss_dssp CSHHHHHHHHH---------------------HHHH---HHHTTCCCCSS----------------CCGGGGCCEEECSC
T ss_pred chhhhHHHHHH---------------------HHHH---HHHcCCCCCcc----------------cccCCCCeEEeeCC
Confidence 00000000000 0000 00000000000 00134566777777
Q ss_pred hhcchHHHHHHHhhCCCeeeeCCCcccccccccccccccccccccCCccccchhhhhh-hcCCCCCeEEEEEeccccccC
Q 011832 225 EDLEEPILSHIRTKCPKVYTIGPLHLQLKTRFASNMISSSSQKSLNSLWEVDRSCIEW-LGKQPVRSVLYVSFGSITLLK 303 (476)
Q Consensus 225 ~~l~~~~l~~~~~~~p~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~I~vs~Gs~~~~~ 303 (476)
..++.+. .........+-..... ......+| ....+++++|++++|+.....
T Consensus 204 ~~~~~~~----~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~ 256 (412)
T 3otg_A 204 PSLQEPE----FRARPRRHELRPVPFA-----------------------EQGDLPAWLSSRDTARPLVYLTLGTSSGGT 256 (412)
T ss_dssp GGGSCHH----HHTCTTEEECCCCCCC-----------------------CCCCCCGGGGGSCTTSCEEEEECTTTTCSC
T ss_pred HHhcCCc----ccCCCCcceeeccCCC-----------------------CCCCCCCccccccCCCCEEEEEcCCCCcCc
Confidence 7766552 1111111111111100 01112345 222346679999999997667
Q ss_pred HHHHHHHHHHHHhcCCceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccChHHHhhcccccccccccCchhHHHHHhh
Q 011832 304 REQLIEFWHGLVDSKQRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQEEVLAHQAVAGFLTHSGWNSTLESIVA 383 (476)
Q Consensus 304 ~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HGG~~s~~eal~~ 383 (476)
.+.+..+++++...+.+++|..+++... +.+ ..+++|+.+.+|+|+.++|+++++ ||+|||.+|+.||+++
T Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~g~~~~~------~~l-~~~~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~ 327 (412)
T 3otg_A 257 VEVLRAAIDGLAGLDADVLVASGPSLDV------SGL-GEVPANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGA 327 (412)
T ss_dssp HHHHHHHHHHHHTSSSEEEEECCSSCCC------TTC-CCCCTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEEECCCCCh------hhh-ccCCCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHh
Confidence 7888889999998888999998765311 111 135789999999999999999998 9999999999999999
Q ss_pred CCceeccCCcccchhhHHHHHhhhcceeeccc-ccCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCChHHHH
Q 011832 384 GVPMICWPYFADQQINSRFVSEVWNLGLDMKD-VCDRNVVEKMVNDLMVERKEEFMRAADRMATMARTTANEGGPSYCNL 462 (476)
Q Consensus 384 GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~~~-~~~~~~l~~~i~~~l~~~~~~y~~~a~~~~~~~~~~~~~~g~~~~~~ 462 (476)
|+|+|++|...||..|+..+ ++.|+|..+.. +++++.|.++|.++|+| +.+++++.+.++.+.+ ..+..+.+
T Consensus 328 G~P~v~~p~~~~q~~~~~~v-~~~g~g~~~~~~~~~~~~l~~ai~~ll~~--~~~~~~~~~~~~~~~~----~~~~~~~~ 400 (412)
T 3otg_A 328 GVPQLSFPWAGDSFANAQAV-AQAGAGDHLLPDNISPDSVSGAAKRLLAE--ESYRAGARAVAAEIAA----MPGPDEVV 400 (412)
T ss_dssp TCCEEECCCSTTHHHHHHHH-HHHTSEEECCGGGCCHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHH----SCCHHHHH
T ss_pred CCCEEecCCchhHHHHHHHH-HHcCCEEecCcccCCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHhc----CCCHHHHH
Confidence 99999999999999999999 77899999985 78999999999999998 7899999888888765 44444444
Q ss_pred HHHH
Q 011832 463 DRLI 466 (476)
Q Consensus 463 ~~~i 466 (476)
+.+.
T Consensus 401 ~~~~ 404 (412)
T 3otg_A 401 RLLP 404 (412)
T ss_dssp TTHH
T ss_pred HHHH
Confidence 4333
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.95 E-value=2.3e-26 Score=225.34 Aligned_cols=320 Identities=17% Similarity=0.136 Sum_probs=195.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchh-hhhhcccccccccCCCCeeEEecCC-CCCC-CCCCCCC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHE-RLIRYTDIHDRFLQYSEFQFKTISD-GLPA-DHPRAGD 84 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~l~~-~~~~-~~~~~~~ 84 (476)
.||+|...|+.||++|.++||++|.++||+|+|+++....+ .+.... .+.++.++- +++. .......
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~----------g~~~~~i~~~~~~~~~~~~~~~ 72 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKA----------GLPLHLIQVSGLRGKGLKSLVK 72 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGG----------TCCEEECC--------------
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhc----------CCcEEEEECCCcCCCCHHHHHH
Confidence 58999988888999999999999999999999999754322 221111 255555542 1211 1112222
Q ss_pred cHHHHHHHHHhhchHHHHHHHhcCCCCceEEEECCCcc--hHHHHHHHcCCCeEEEecCchHHHHHHHhhhHHHhhCCCC
Q 011832 85 QLMEMFDSLSLNTRPLLKQMLIDTSPPVSCIIGDACME--FVVDVATELEIPVIHFRAISACSFWAYFSIPEMIQAGELP 162 (476)
Q Consensus 85 ~~~~~~~~~~~~~~~~l~~ll~~~~~~~DlvI~D~~~~--~~~~vA~~l~iP~i~~~~~~~~~~~~~~~~~~~~~~~~~p 162 (476)
.+..++..+ .....++++. +||+||++..+. .+..+|..+|||++..-..
T Consensus 73 ~~~~~~~~~-----~~~~~~l~~~--~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n--------------------- 124 (365)
T 3s2u_A 73 APLELLKSL-----FQALRVIRQL--RPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQN--------------------- 124 (365)
T ss_dssp CHHHHHHHH-----HHHHHHHHHH--CCSEEEECSSSTHHHHHHHHHHTTCCEEEEECS---------------------
T ss_pred HHHHHHHHH-----HHHHHHHHhc--CCCEEEEcCCcchHHHHHHHHHcCCCEEEEecc---------------------
Confidence 233333222 2345677777 899999997666 4456789999999974211
Q ss_pred CCcCCccccccccccCCCCcccccCCCCCccccCCCCchHHHHHHHHhhcCCCCcEEEEcchhhcchHHHHHHHhhCCCe
Q 011832 163 MKAYDEDMDRLITKVPGMETFLRFRDLPSFCRVSDVTDRDLQVLKNATQQSPRAHALILNTFEDLEEPILSHIRTKCPKV 242 (476)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~l~~~~~~~p~~ 242 (476)
..+++.| +.. .+.++.++......+ +...+.
T Consensus 125 -------------~~~G~~n---------------------r~l------~~~a~~v~~~~~~~~---------~~~~k~ 155 (365)
T 3s2u_A 125 -------------AVAGTAN---------------------RSL------APIARRVCEAFPDTF---------PASDKR 155 (365)
T ss_dssp -------------SSCCHHH---------------------HHH------GGGCSEEEESSTTSS---------CC---C
T ss_pred -------------hhhhhHH---------------------Hhh------ccccceeeecccccc---------cCcCcE
Confidence 0112111 000 011222222221111 111245
Q ss_pred eeeCCCcccccccccccccccccccccCCccccchhhhhhhcCCCCCeEEEEEeccccccCHHHHHHHHHHHHhcC----
Q 011832 243 YTIGPLHLQLKTRFASNMISSSSQKSLNSLWEVDRSCIEWLGKQPVRSVLYVSFGSITLLKREQLIEFWHGLVDSK---- 318 (476)
Q Consensus 243 ~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~Gs~~~~~~~~~~~~~~a~~~~~---- 318 (476)
+++|......... .. .......++++.|++..||... ....+.+.+++..+.
T Consensus 156 ~~~g~pvr~~~~~--------------------~~--~~~~~~~~~~~~ilv~gGs~g~--~~~~~~~~~al~~l~~~~~ 211 (365)
T 3s2u_A 156 LTTGNPVRGELFL--------------------DA--HARAPLTGRRVNLLVLGGSLGA--EPLNKLLPEALAQVPLEIR 211 (365)
T ss_dssp EECCCCCCGGGCC--------------------CT--TSSCCCTTSCCEEEECCTTTTC--SHHHHHHHHHHHTSCTTTC
T ss_pred EEECCCCchhhcc--------------------ch--hhhcccCCCCcEEEEECCcCCc--cccchhhHHHHHhcccccc
Confidence 6666544322110 00 0111112355689998888753 223344666666543
Q ss_pred CceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccChH-HHhhcccccccccccCchhHHHHHhhCCceeccCCc----
Q 011832 319 QRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQE-EVLAHQAVAGFLTHSGWNSTLESIVAGVPMICWPYF---- 393 (476)
Q Consensus 319 ~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq~-~lL~~~~~~~~I~HGG~~s~~eal~~GvP~l~iP~~---- 393 (476)
..++|..+... .+.+.......+.|+.+..|+++. ++|+.+|+ +|||+|.+|+.|++++|+|+|.+|+-
T Consensus 212 ~~vi~~~G~~~----~~~~~~~~~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~ 285 (365)
T 3s2u_A 212 PAIRHQAGRQH----AEITAERYRTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAID 285 (365)
T ss_dssp CEEEEECCTTT----HHHHHHHHHHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----C
T ss_pred eEEEEecCccc----cccccceecccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCC
Confidence 35677765431 122322223467899999999985 79999998 99999999999999999999999973
Q ss_pred ccchhhHHHHHhhhcceeeccc-ccCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHH
Q 011832 394 ADQQINSRFVSEVWNLGLDMKD-VCDRNVVEKMVNDLMVERKEEFMRAADRMATMART 450 (476)
Q Consensus 394 ~DQ~~na~~v~~~~G~G~~~~~-~~~~~~l~~~i~~~l~~~~~~y~~~a~~~~~~~~~ 450 (476)
.+|..||+.+ ++.|+|..++. +++++.|.++|.++|+| ++.+ ++|++.+++
T Consensus 286 ~~Q~~NA~~l-~~~G~a~~l~~~~~~~~~L~~~i~~ll~d--~~~~---~~m~~~a~~ 337 (365)
T 3s2u_A 286 DHQTRNAEFL-VRSGAGRLLPQKSTGAAELAAQLSEVLMH--PETL---RSMADQARS 337 (365)
T ss_dssp CHHHHHHHHH-HTTTSEEECCTTTCCHHHHHHHHHHHHHC--THHH---HHHHHHHHH
T ss_pred cHHHHHHHHH-HHCCCEEEeecCCCCHHHHHHHHHHHHCC--HHHH---HHHHHHHHh
Confidence 4799999999 67799999984 89999999999999996 4333 345555544
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.95 E-value=3e-27 Score=206.09 Aligned_cols=162 Identities=19% Similarity=0.357 Sum_probs=137.3
Q ss_pred cchhhhhhhcCCCCCeEEEEEecccc-ccCHHHHHHHHHHHHhcCCceEEEECCCCCCCchhhHHHHHHhhcCCceEeec
Q 011832 275 VDRSCIEWLGKQPVRSVLYVSFGSIT-LLKREQLIEFWHGLVDSKQRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSW 353 (476)
Q Consensus 275 ~~~~~~~~l~~~~~~~~I~vs~Gs~~-~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~ 353 (476)
.+.++.+|++..+++++|||++||.. ..+.+.+..++++++..+.+++|+.++... +.+++|+.+.+|
T Consensus 7 l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~-----------~~~~~~v~~~~~ 75 (170)
T 2o6l_A 7 LPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKP-----------DTLGLNTRLYKW 75 (170)
T ss_dssp CCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCC-----------TTCCTTEEEESS
T ss_pred CCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcCc-----------ccCCCcEEEecC
Confidence 35678999987666789999999996 457788889999999888999999875421 136789999999
Q ss_pred cChHHHhhcccccccccccCchhHHHHHhhCCceeccCCcccchhhHHHHHhhhcceeeccc-ccCHHHHHHHHHHHHhH
Q 011832 354 VPQEEVLAHQAVAGFLTHSGWNSTLESIVAGVPMICWPYFADQQINSRFVSEVWNLGLDMKD-VCDRNVVEKMVNDLMVE 432 (476)
Q Consensus 354 ~pq~~lL~~~~~~~~I~HGG~~s~~eal~~GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~~~-~~~~~~l~~~i~~~l~~ 432 (476)
+||.++|.|+.+.+||||||.||+.||+++|+|+|++|...||..||.++ ++.|+|+.++. +++.++|.++|.+++++
T Consensus 76 ~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l-~~~g~g~~~~~~~~~~~~l~~~i~~ll~~ 154 (170)
T 2o6l_A 76 IPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHM-KARGAAVRVDFNTMSSTDLLNALKRVIND 154 (170)
T ss_dssp CCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH-HTTTSEEECCTTTCCHHHHHHHHHHHHHC
T ss_pred CCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHH-HHcCCeEEeccccCCHHHHHHHHHHHHcC
Confidence 99999995544555999999999999999999999999999999999999 77899999984 78999999999999997
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 011832 433 RKEEFMRAADRMATMART 450 (476)
Q Consensus 433 ~~~~y~~~a~~~~~~~~~ 450 (476)
++|+++++++++.+++
T Consensus 155 --~~~~~~a~~~~~~~~~ 170 (170)
T 2o6l_A 155 --PSYKENVMKLSRIQHD 170 (170)
T ss_dssp --HHHHHHHHHHC-----
T ss_pred --HHHHHHHHHHHHHhhC
Confidence 7899999999998764
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.85 E-value=7.3e-19 Score=172.04 Aligned_cols=310 Identities=13% Similarity=0.080 Sum_probs=190.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchh-hhhhcccccccccCCCCeeEEecCCC-CCCCCCCCCCc
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHE-RLIRYTDIHDRFLQYSEFQFKTISDG-LPADHPRAGDQ 85 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~l~~~-~~~~~~~~~~~ 85 (476)
|||++++.+..||..+...|+++|.++||+|++++...... ...... .+.+..++.. ++. ..
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~----------g~~~~~~~~~~~~~------~~ 70 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKH----------GIEIDFIRISGLRG------KG 70 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGG----------TCEEEECCCCCCTT------CC
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhcccc----------CCceEEecCCccCc------Cc
Confidence 89999998777999999999999999999999999854321 111111 2555554321 111 11
Q ss_pred HHHHHHHHH--hhchHHHHHHHhcCCCCceEEEECCCcc--hHHHHHHHcCCCeEEEecCchHHHHHHHhhhHHHhhCCC
Q 011832 86 LMEMFDSLS--LNTRPLLKQMLIDTSPPVSCIIGDACME--FVVDVATELEIPVIHFRAISACSFWAYFSIPEMIQAGEL 161 (476)
Q Consensus 86 ~~~~~~~~~--~~~~~~l~~ll~~~~~~~DlvI~D~~~~--~~~~vA~~l~iP~i~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (476)
....+.... ......+.+++++. +||+|+++.... .+..++..+|+|++.......
T Consensus 71 ~~~~~~~~~~~~~~~~~l~~~l~~~--~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~------------------ 130 (364)
T 1f0k_A 71 IKALIAAPLRIFNAWRQARAIMKAY--KPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGI------------------ 130 (364)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHHH--CCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSS------------------
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhc--CCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCCC------------------
Confidence 111110000 01123456667776 899999986542 456678889999986532110
Q ss_pred CCCcCCccccccccccCCCCcccccCCCCCccccCCCCchHHHHHHHHhhcCCCCcEEEEcchhhcchHHHHHHHhhCCC
Q 011832 162 PMKAYDEDMDRLITKVPGMETFLRFRDLPSFCRVSDVTDRDLQVLKNATQQSPRAHALILNTFEDLEEPILSHIRTKCPK 241 (476)
Q Consensus 162 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~l~~~~~~~p~ 241 (476)
++. ..+ .....++.+++.+... .|+
T Consensus 131 ----------------~~~---------------------~~~------~~~~~~d~v~~~~~~~------------~~~ 155 (364)
T 1f0k_A 131 ----------------AGL---------------------TNK------WLAKIATKVMQAFPGA------------FPN 155 (364)
T ss_dssp ----------------CCH---------------------HHH------HHTTTCSEEEESSTTS------------SSS
T ss_pred ----------------CcH---------------------HHH------HHHHhCCEEEecChhh------------cCC
Confidence 000 000 0012345555544321 224
Q ss_pred eeeeCCCcccccccccccccccccccccCCccccchhhhhhhcCCCCCeEEEEEeccccccCHHHHHHHHHHHHhc--CC
Q 011832 242 VYTIGPLHLQLKTRFASNMISSSSQKSLNSLWEVDRSCIEWLGKQPVRSVLYVSFGSITLLKREQLIEFWHGLVDS--KQ 319 (476)
Q Consensus 242 ~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~Gs~~~~~~~~~~~~~~a~~~~--~~ 319 (476)
+..+|.-...... .... ..+.+...+++++|++..|+.. .......+++++..+ +.
T Consensus 156 ~~~i~n~v~~~~~-------------------~~~~-~~~~~~~~~~~~~il~~~g~~~--~~k~~~~li~a~~~l~~~~ 213 (364)
T 1f0k_A 156 AEVVGNPVRTDVL-------------------ALPL-PQQRLAGREGPVRVLVVGGSQG--ARILNQTMPQVAAKLGDSV 213 (364)
T ss_dssp CEECCCCCCHHHH-------------------TSCC-HHHHHTTCCSSEEEEEECTTTC--CHHHHHHHHHHHHHHGGGE
T ss_pred ceEeCCccchhhc-------------------ccch-hhhhcccCCCCcEEEEEcCchH--hHHHHHHHHHHHHHhcCCc
Confidence 5555543221110 0000 1112222234567888888874 344455566777655 34
Q ss_pred ceEEEECCCCCCCchhhHHHHHHhhc-CCceEeeccCh-HHHhhcccccccccccCchhHHHHHhhCCceeccCCc---c
Q 011832 320 RFLWVIRPDSVIGEGDALAELVEGTK-ERGLLVSWVPQ-EEVLAHQAVAGFLTHSGWNSTLESIVAGVPMICWPYF---A 394 (476)
Q Consensus 320 ~~i~~~~~~~~~~~~~~l~~~~~~~~-~nv~~~~~~pq-~~lL~~~~~~~~I~HGG~~s~~eal~~GvP~l~iP~~---~ 394 (476)
++++.++.+. .+.+.......+ +||.+.+|+++ .++|+.+++ +|+++|.+++.||+++|+|+|+.|.. .
T Consensus 214 ~~l~i~G~~~----~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~ 287 (364)
T 1f0k_A 214 TIWHQSGKGS----QQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDR 287 (364)
T ss_dssp EEEEECCTTC----HHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTC
T ss_pred EEEEEcCCch----HHHHHHHHhhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCch
Confidence 5566666442 123333223333 58999999954 689999998 99999989999999999999999987 7
Q ss_pred cchhhHHHHHhhhcceeeccc-ccCHHHHHHHHHHHHhHhHHHHHHHH
Q 011832 395 DQQINSRFVSEVWNLGLDMKD-VCDRNVVEKMVNDLMVERKEEFMRAA 441 (476)
Q Consensus 395 DQ~~na~~v~~~~G~G~~~~~-~~~~~~l~~~i~~~l~~~~~~y~~~a 441 (476)
||..|+..+ .+.|.|..++. +++.+.|+++|.++ + +..+++.
T Consensus 288 ~q~~~~~~~-~~~g~g~~~~~~d~~~~~la~~i~~l-~---~~~~~~~ 330 (364)
T 1f0k_A 288 QQYWNALPL-EKAGAAKIIEQPQLSVDAVANTLAGW-S---RETLLTM 330 (364)
T ss_dssp HHHHHHHHH-HHTTSEEECCGGGCCHHHHHHHHHTC-C---HHHHHHH
T ss_pred hHHHHHHHH-HhCCcEEEeccccCCHHHHHHHHHhc-C---HHHHHHH
Confidence 899999999 56699998874 67799999999998 4 4444443
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.60 E-value=1.7e-13 Score=127.47 Aligned_cols=117 Identities=8% Similarity=0.089 Sum_probs=87.9
Q ss_pred CCeEEEEEeccccccCHHHHHHHHHHHHhcCCceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccChH-HHhhccccc
Q 011832 288 VRSVLYVSFGSITLLKREQLIEFWHGLVDSKQRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQE-EVLAHQAVA 366 (476)
Q Consensus 288 ~~~~I~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq~-~lL~~~~~~ 366 (476)
+.+.|+|++|... .......+++++.... ++.++.+.+.. ..+.+...... ..|+.+..|+++. ++|..+++
T Consensus 156 ~~~~ILv~~GG~d--~~~l~~~vl~~L~~~~-~i~vv~G~~~~--~~~~l~~~~~~-~~~v~v~~~~~~m~~~m~~aDl- 228 (282)
T 3hbm_A 156 KKYDFFICMGGTD--IKNLSLQIASELPKTK-IISIATSSSNP--NLKKLQKFAKL-HNNIRLFIDHENIAKLMNESNK- 228 (282)
T ss_dssp CCEEEEEECCSCC--TTCHHHHHHHHSCTTS-CEEEEECTTCT--THHHHHHHHHT-CSSEEEEESCSCHHHHHHTEEE-
T ss_pred cCCeEEEEECCCc--hhhHHHHHHHHhhcCC-CEEEEECCCch--HHHHHHHHHhh-CCCEEEEeCHHHHHHHHHHCCE-
Confidence 4568999999753 2335566778876654 45555554421 12233222222 2489999999886 69999998
Q ss_pred ccccccCchhHHHHHhhCCceeccCCcccchhhHHHHHhhhcceeecc
Q 011832 367 GFLTHSGWNSTLESIVAGVPMICWPYFADQQINSRFVSEVWNLGLDMK 414 (476)
Q Consensus 367 ~~I~HGG~~s~~eal~~GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~~ 414 (476)
+|++|| +|+.|+++.|+|++++|...+|..||+.+ ++.|++..+.
T Consensus 229 -vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l-~~~G~~~~~~ 273 (282)
T 3hbm_A 229 -LIISAS-SLVNEALLLKANFKAICYVKNQESTATWL-AKKGYEVEYK 273 (282)
T ss_dssp -EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHH-HHTTCEEECG
T ss_pred -EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHH-HHCCCEEEcc
Confidence 999999 89999999999999999999999999999 7779999886
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.57 E-value=4.3e-15 Score=132.62 Aligned_cols=134 Identities=12% Similarity=0.075 Sum_probs=95.7
Q ss_pred CCCeEEEEEeccccccCHHHHHHH-----HHHHHhcC-CceEEEECCCCCCCchhhH-HHHHH----h-hc---------
Q 011832 287 PVRSVLYVSFGSITLLKREQLIEF-----WHGLVDSK-QRFLWVIRPDSVIGEGDAL-AELVE----G-TK--------- 345 (476)
Q Consensus 287 ~~~~~I~vs~Gs~~~~~~~~~~~~-----~~a~~~~~-~~~i~~~~~~~~~~~~~~l-~~~~~----~-~~--------- 345 (476)
+++++|||+.||.... .+.+..+ ++++...+ .+++++++....... ..+ ..+.+ . +|
T Consensus 26 ~~~~~VlVtgGS~~~~-n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~~~-~~~~~~~~~~~~~~l~p~~~~~~~~~ 103 (224)
T 2jzc_A 26 IEEKALFVTCGATVPF-PKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSEF-EHLVQERGGQRESQKIPIDQFGCGDT 103 (224)
T ss_dssp CCSCCEEEECCSCCSC-HHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCCCC-CSHHHHHTCEECSCCCSSCTTCTTCS
T ss_pred CCCCEEEEEcCCchHH-HHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchhhH-HHHHHhhhcccccccccccccccccc
Confidence 4567999999997422 3333333 47887777 689999886532100 011 11100 0 12
Q ss_pred --------C--CceEeeccChH-HHhh-cccccccccccCchhHHHHHhhCCceeccCCc----ccchhhHHHHHhhhcc
Q 011832 346 --------E--RGLLVSWVPQE-EVLA-HQAVAGFLTHSGWNSTLESIVAGVPMICWPYF----ADQQINSRFVSEVWNL 409 (476)
Q Consensus 346 --------~--nv~~~~~~pq~-~lL~-~~~~~~~I~HGG~~s~~eal~~GvP~l~iP~~----~DQ~~na~~v~~~~G~ 409 (476)
. ++.+..|+++. ++|+ .+++ +|||||.||+.|++++|+|+|++|.. .||..||+++ ++.|+
T Consensus 104 ~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l-~~~G~ 180 (224)
T 2jzc_A 104 ARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKF-VELGY 180 (224)
T ss_dssp CEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHH-HHHSC
T ss_pred ccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHH-HHCCC
Confidence 2 34466888876 7999 9998 99999999999999999999999984 3699999999 67799
Q ss_pred eeecccccCHHHHHHHHHHH
Q 011832 410 GLDMKDVCDRNVVEKMVNDL 429 (476)
Q Consensus 410 G~~~~~~~~~~~l~~~i~~~ 429 (476)
++.+ +.+.|.++|.++
T Consensus 181 ~~~~----~~~~L~~~i~~l 196 (224)
T 2jzc_A 181 VWSC----APTETGLIAGLR 196 (224)
T ss_dssp CCEE----CSCTTTHHHHHH
T ss_pred EEEc----CHHHHHHHHHHH
Confidence 8765 677888888776
No 25
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.45 E-value=2.1e-11 Score=119.99 Aligned_cols=352 Identities=11% Similarity=0.044 Sum_probs=190.0
Q ss_pred CCCCCEEEEEcC--C--CccCHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhcccccccccCCCCeeEEecCCCCCCCC
Q 011832 4 KPKSPHILIFPL--P--CQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHERLIRYTDIHDRFLQYSEFQFKTISDGLPADH 79 (476)
Q Consensus 4 ~~~~~~il~~~~--~--~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~ 79 (476)
|+++|||++++. + ..|.-.....+++.| +||+|++++............ ....+.+..++.....
T Consensus 1 M~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~-- 69 (394)
T 3okp_A 1 MSASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYD-------KTLDYEVIRWPRSVML-- 69 (394)
T ss_dssp ---CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHH-------TTCSSEEEEESSSSCC--
T ss_pred CCCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhc-------cccceEEEEccccccc--
Confidence 466789999974 3 457788899999999 799999999865433111111 1112555555421110
Q ss_pred CCCCCcHHHHHHHHHhhchHHHHHHHhcCCCCceEEEECCCcc--hHHHHHHHcCCCeEEEecCchHHHHHHHhhhHHHh
Q 011832 80 PRAGDQLMEMFDSLSLNTRPLLKQMLIDTSPPVSCIIGDACME--FVVDVATELEIPVIHFRAISACSFWAYFSIPEMIQ 157 (476)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~DlvI~D~~~~--~~~~vA~~l~iP~i~~~~~~~~~~~~~~~~~~~~~ 157 (476)
... .....+.+++++. +||+|++..... ....++..+++|.+.+.........
T Consensus 70 ----~~~---------~~~~~l~~~~~~~--~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~---------- 124 (394)
T 3okp_A 70 ----PTP---------TTAHAMAEIIRER--EIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGW---------- 124 (394)
T ss_dssp ----SCH---------HHHHHHHHHHHHT--TCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHH----------
T ss_pred ----cch---------hhHHHHHHHHHhc--CCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhh----------
Confidence 111 1123456777776 899999765544 4456688899985543322110000
Q ss_pred hCCCCCCcCCccccccccccCCCCcccccCCCCCccccCCCCchHHHHHHHHhhcCCCCcEEEEcchhhcchHHHHHHHh
Q 011832 158 AGELPMKAYDEDMDRLITKVPGMETFLRFRDLPSFCRVSDVTDRDLQVLKNATQQSPRAHALILNTFEDLEEPILSHIRT 237 (476)
Q Consensus 158 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~l~~~~~ 237 (476)
. . . ...+... ......+|.+++.|....+.- ..
T Consensus 125 -------------------~-~-------------------~-~~~~~~~--~~~~~~~d~ii~~s~~~~~~~-----~~ 157 (394)
T 3okp_A 125 -------------------S-M-------------------L-PGSRQSL--RKIGTEVDVLTYISQYTLRRF-----KS 157 (394)
T ss_dssp -------------------T-T-------------------S-HHHHHHH--HHHHHHCSEEEESCHHHHHHH-----HH
T ss_pred -------------------h-h-------------------c-chhhHHH--HHHHHhCCEEEEcCHHHHHHH-----HH
Confidence 0 0 0 0000000 111256788888887654332 22
Q ss_pred -hC--CCeeeeCCCcccccccccccccccccccccCCccccchhhhhhhcCCCCCeEEEEEeccccccCHHHHHHHHHHH
Q 011832 238 -KC--PKVYTIGPLHLQLKTRFASNMISSSSQKSLNSLWEVDRSCIEWLGKQPVRSVLYVSFGSITLLKREQLIEFWHGL 314 (476)
Q Consensus 238 -~~--p~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~Gs~~~~~~~~~~~~~~a~ 314 (476)
.. .++..|..-.....-. +. .+ .....+.+.+.-. ++..+++..|+.. ....+..+++++
T Consensus 158 ~~~~~~~~~vi~ngv~~~~~~-~~------~~-------~~~~~~~~~~~~~-~~~~~i~~~G~~~--~~Kg~~~li~a~ 220 (394)
T 3okp_A 158 AFGSHPTFEHLPSGVDVKRFT-PA------TP-------EDKSATRKKLGFT-DTTPVIACNSRLV--PRKGQDSLIKAM 220 (394)
T ss_dssp HHCSSSEEEECCCCBCTTTSC-CC------CH-------HHHHHHHHHTTCC-TTCCEEEEESCSC--GGGCHHHHHHHH
T ss_pred hcCCCCCeEEecCCcCHHHcC-CC------Cc-------hhhHHHHHhcCCC-cCceEEEEEeccc--cccCHHHHHHHH
Confidence 11 2444444322111000 00 00 0112233333322 3335677788874 223334455555
Q ss_pred Hhc-----CCceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccChHH---Hhhccccccccc-----------ccCch
Q 011832 315 VDS-----KQRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQEE---VLAHQAVAGFLT-----------HSGWN 375 (476)
Q Consensus 315 ~~~-----~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq~~---lL~~~~~~~~I~-----------HGG~~ 375 (476)
..+ +.++++.-.++ ....+..+...+.+++.+.+|+|+.+ ++..+++ +|. -|.-+
T Consensus 221 ~~l~~~~~~~~l~i~G~g~----~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~ 294 (394)
T 3okp_A 221 PQVIAARPDAQLLIVGSGR----YESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGI 294 (394)
T ss_dssp HHHHHHSTTCEEEEECCCT----THHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCH
T ss_pred HHHHhhCCCeEEEEEcCch----HHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCc
Confidence 433 34555443222 12233333345668999999998665 7888888 665 55567
Q ss_pred hHHHHHhhCCceeccCCcccchhhHHHHHhhhcceeecccccCHHHHHHHHHHHHhHhHHHHH-HHHHHHHHHHHHHHhc
Q 011832 376 STLESIVAGVPMICWPYFADQQINSRFVSEVWNLGLDMKDVCDRNVVEKMVNDLMVERKEEFM-RAADRMATMARTTANE 454 (476)
Q Consensus 376 s~~eal~~GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~l~~~i~~~l~~~~~~y~-~~a~~~~~~~~~~~~~ 454 (476)
++.||+++|+|+|+.+.. .....+ +. |.|..++ .-+.+++.++|.+++++ +..+ +-.++..+.++ +
T Consensus 295 ~~~Ea~a~G~PvI~~~~~----~~~e~i-~~-~~g~~~~-~~d~~~l~~~i~~l~~~--~~~~~~~~~~~~~~~~----~ 361 (394)
T 3okp_A 295 VYLEAQACGVPVIAGTSG----GAPETV-TP-ATGLVVE-GSDVDKLSELLIELLDD--PIRRAAMGAAGRAHVE----A 361 (394)
T ss_dssp HHHHHHHTTCCEEECSST----TGGGGC-CT-TTEEECC-TTCHHHHHHHHHHHHTC--HHHHHHHHHHHHHHHH----H
T ss_pred HHHHHHHcCCCEEEeCCC----ChHHHH-hc-CCceEeC-CCCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHH----H
Confidence 899999999999997653 333344 54 5777665 35899999999999985 3322 22222222222 2
Q ss_pred CCChHHHHHHHHHHHHhhcc
Q 011832 455 GGPSYCNLDRLIDDIKMMSS 474 (476)
Q Consensus 455 ~g~~~~~~~~~i~~~~~~~~ 474 (476)
.-+..+.++++++.+.+..+
T Consensus 362 ~~s~~~~~~~~~~~~~~~~r 381 (394)
T 3okp_A 362 EWSWEIMGERLTNILQSEPR 381 (394)
T ss_dssp HTBHHHHHHHHHHHHHSCCC
T ss_pred hCCHHHHHHHHHHHHHHhcc
Confidence 34566777777777665544
No 26
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.38 E-value=3.2e-11 Score=119.14 Aligned_cols=353 Identities=11% Similarity=0.084 Sum_probs=181.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCcchhhhhhcccccccccCCCCeeEEecCCCCCCCCCCC
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGLA--GLKVTFLNSKHNHERLIRYTDIHDRFLQYSEFQFKTISDGLPADHPRA 82 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~ 82 (476)
+++|||+++. +++....-+..|.++|.++ |+++.++.+....+ ...... ......++. .+ .- ...
T Consensus 25 m~~~kI~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~~-m~~~~~--~~~~i~~~~---~l----~v--~~~ 91 (403)
T 3ot5_A 25 MAKIKVMSIF-GTRPEAIKMAPLVLALEKEPETFESTVVITAQHRE-MLDQVL--EIFDIKPDI---DL----DI--MKK 91 (403)
T ss_dssp -CCEEEEEEE-CSHHHHHHHHHHHHHHHTCTTTEEEEEEECC------CHHHH--HHTTCCCSE---EC----CC--CC-
T ss_pred cccceEEEEE-ecChhHHHHHHHHHHHHhCCCCCcEEEEEecCcHH-HHHHHH--HhcCCCCCc---cc----cc--CCC
Confidence 4467898888 7777788889999999998 68887666643211 111100 000000111 11 10 011
Q ss_pred CCcHHHHHHHHHhhchHHHHHHHhcCCCCceEEEECC--Ccc-hHHHHHHHcCCCeEEEecCchHHHHHHHhhhHHHhhC
Q 011832 83 GDQLMEMFDSLSLNTRPLLKQMLIDTSPPVSCIIGDA--CME-FVVDVATELEIPVIHFRAISACSFWAYFSIPEMIQAG 159 (476)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~DlvI~D~--~~~-~~~~vA~~l~iP~i~~~~~~~~~~~~~~~~~~~~~~~ 159 (476)
..+.... .......+.+++++. +||+|++-. ... ++..+|..+|||++.+....
T Consensus 92 ~~~~~~~----~~~~~~~l~~~l~~~--kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~agl----------------- 148 (403)
T 3ot5_A 92 GQTLAEI----TSRVMNGINEVIAAE--NPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEAGL----------------- 148 (403)
T ss_dssp CCCHHHH----HHHHHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCCC-----------------
T ss_pred CCCHHHH----HHHHHHHHHHHHHHc--CCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCc-----------------
Confidence 1122221 122234577788887 899998632 222 45678999999988763210
Q ss_pred CCCCCcCCccccccccccCCCCcccccCCCCCccccCCCCchHHHHHHHHhhcCCCCcEEEEcchhhcchHHHHHHHhhC
Q 011832 160 ELPMKAYDEDMDRLITKVPGMETFLRFRDLPSFCRVSDVTDRDLQVLKNATQQSPRAHALILNTFEDLEEPILSHIRTKC 239 (476)
Q Consensus 160 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~l~~~~~~~ 239 (476)
. +| + .+..+ .+...+.... .-++.+++.+...-+.-. +--.
T Consensus 149 ----r----------s~-----~--~~~~~---------p~~~~r~~~~-----~~a~~~~~~se~~~~~l~----~~Gi 189 (403)
T 3ot5_A 149 ----R----------TW-----N--KYSPF---------PEEMNRQLTG-----VMADIHFSPTKQAKENLL----AEGK 189 (403)
T ss_dssp ----C----------CS-----C--TTSST---------THHHHHHHHH-----HHCSEEEESSHHHHHHHH----HTTC
T ss_pred ----c----------cc-----c--cccCC---------cHHHHHHHHH-----HhcCEEECCCHHHHHHHH----HcCC
Confidence 0 00 0 00000 0111111111 125667777754422211 1122
Q ss_pred C--CeeeeCCCcccccccccccccccccccccCCccccchhhhhhhcCCCCCeEEEEEeccccccCHHHHHHHHHHHHhc
Q 011832 240 P--KVYTIGPLHLQLKTRFASNMISSSSQKSLNSLWEVDRSCIEWLGKQPVRSVLYVSFGSITLLKREQLIEFWHGLVDS 317 (476)
Q Consensus 240 p--~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~Gs~~~~~~~~~~~~~~a~~~~ 317 (476)
+ ++..+|....+....... .. ...+..+.+ +++++++++.|...... +.+..+++++..+
T Consensus 190 ~~~~i~vvGn~~~D~~~~~~~-----~~---------~~~~~~~~l---~~~~~vlv~~~r~~~~~-~~l~~ll~a~~~l 251 (403)
T 3ot5_A 190 DPATIFVTGNTAIDALKTTVQ-----KD---------YHHPILENL---GDNRLILMTAHRRENLG-EPMQGMFEAVREI 251 (403)
T ss_dssp CGGGEEECCCHHHHHHHHHSC-----TT---------CCCHHHHSC---TTCEEEEECCCCHHHHT-THHHHHHHHHHHH
T ss_pred CcccEEEeCCchHHHHHhhhh-----hh---------cchHHHHhc---cCCCEEEEEeCcccccC-cHHHHHHHHHHHH
Confidence 2 578888644332110000 00 011222223 34567777765432211 1245566665442
Q ss_pred -----CCceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccCh---HHHhhcccccccccccCchhHHHHHhhCCceec
Q 011832 318 -----KQRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQ---EEVLAHQAVAGFLTHSGWNSTLESIVAGVPMIC 389 (476)
Q Consensus 318 -----~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq---~~lL~~~~~~~~I~HGG~~s~~eal~~GvP~l~ 389 (476)
+.++++....+. ...+.+..+.+ ..+|+.+.+++++ ..+++.+++ +|+-.|. .+.||.++|+|+|+
T Consensus 252 ~~~~~~~~~v~~~~~~~--~~~~~l~~~~~-~~~~v~l~~~l~~~~~~~l~~~ad~--vv~~SGg-~~~EA~a~g~PvV~ 325 (403)
T 3ot5_A 252 VESREDTELVYPMHLNP--AVREKAMAILG-GHERIHLIEPLDAIDFHNFLRKSYL--VFTDSGG-VQEEAPGMGVPVLV 325 (403)
T ss_dssp HHHCTTEEEEEECCSCH--HHHHHHHHHHT-TCTTEEEECCCCHHHHHHHHHHEEE--EEECCHH-HHHHGGGTTCCEEE
T ss_pred HHhCCCceEEEecCCCH--HHHHHHHHHhC-CCCCEEEeCCCCHHHHHHHHHhcCE--EEECCcc-HHHHHHHhCCCEEE
Confidence 335565543221 00111222211 2368999998874 468889998 8987752 23699999999999
Q ss_pred cCCcccchhhHHHHHhhhcceeecccccCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 011832 390 WPYFADQQINSRFVSEVWNLGLDMKDVCDRNVVEKMVNDLMVERKEEFMRAADRMATMARTTANEGGPSYCNLDRLIDDI 469 (476)
Q Consensus 390 iP~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~l~~~i~~~l~~~~~~y~~~a~~~~~~~~~~~~~~g~~~~~~~~~i~~~ 469 (476)
+|-.++++. .+ + .|.|+.+.. +.++|.+++.++|++ +..+++. ++..+. ..+++++.+.++.+.+.+
T Consensus 326 ~~~~~~~~e---~v-~-~g~~~lv~~--d~~~l~~ai~~ll~~--~~~~~~m---~~~~~~-~g~~~aa~rI~~~l~~~l 392 (403)
T 3ot5_A 326 LRDTTERPE---GI-E-AGTLKLIGT--NKENLIKEALDLLDN--KESHDKM---AQAANP-YGDGFAANRILAAIKSHF 392 (403)
T ss_dssp CCSSCSCHH---HH-H-HTSEEECCS--CHHHHHHHHHHHHHC--HHHHHHH---HHSCCT-TCCSCHHHHHHHHHHHHH
T ss_pred ecCCCcchh---he-e-CCcEEEcCC--CHHHHHHHHHHHHcC--HHHHHHH---HhhcCc-ccCCcHHHHHHHHHHHHh
Confidence 976666654 24 4 488877763 899999999999986 4444433 322222 345555555555544443
No 27
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.36 E-value=1.2e-10 Score=114.07 Aligned_cols=129 Identities=13% Similarity=0.151 Sum_probs=83.6
Q ss_pred CeEEEEEeccccccCHHHHHHHHHHHHhc-----CCceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccCh---HHHh
Q 011832 289 RSVLYVSFGSITLLKREQLIEFWHGLVDS-----KQRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQ---EEVL 360 (476)
Q Consensus 289 ~~~I~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq---~~lL 360 (476)
+++|+++.|...... .+..+++++..+ +.++++..+.+. ...+.+..+.+ ..++|.+.+++++ .++|
T Consensus 198 ~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~~--~~~~~l~~~~~-~~~~v~~~g~~g~~~~~~~~ 272 (376)
T 1v4v_A 198 GPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLNP--VVREAVFPVLK-GVRNFVLLDPLEYGSMAALM 272 (376)
T ss_dssp SCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSCH--HHHHHHHHHHT-TCTTEEEECCCCHHHHHHHH
T ss_pred CCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCCH--HHHHHHHHHhc-cCCCEEEECCCCHHHHHHHH
Confidence 456777777654222 345566666543 334444433221 00112222211 1358888866555 4799
Q ss_pred hcccccccccccCchhHHHHHhhCCceeccCCcccchhhHHHHHhhhcceeecccccCHHHHHHHHHHHHhH
Q 011832 361 AHQAVAGFLTHSGWNSTLESIVAGVPMICWPYFADQQINSRFVSEVWNLGLDMKDVCDRNVVEKMVNDLMVE 432 (476)
Q Consensus 361 ~~~~~~~~I~HGG~~s~~eal~~GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~l~~~i~~~l~~ 432 (476)
+.+++ ||+.+| |.+.||+++|+|+|+.+..+++... + + .|.|..++ .+.+.|+++|.++|+|
T Consensus 273 ~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~---~-~-~g~g~lv~--~d~~~la~~i~~ll~d 334 (376)
T 1v4v_A 273 RASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPEG---L-K-AGILKLAG--TDPEGVYRVVKGLLEN 334 (376)
T ss_dssp HTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHHH---H-H-HTSEEECC--SCHHHHHHHHHHHHTC
T ss_pred HhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchhh---h-c-CCceEECC--CCHHHHHHHHHHHHhC
Confidence 99998 998884 4466999999999999876776652 3 4 48888775 3899999999999986
No 28
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.34 E-value=4.5e-10 Score=114.40 Aligned_cols=361 Identities=9% Similarity=0.042 Sum_probs=176.5
Q ss_pred CCCCCCCCEEEEEcCC---------------CccCHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhcccccccccCCCC
Q 011832 1 MEEKPKSPHILIFPLP---------------CQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHERLIRYTDIHDRFLQYSE 65 (476)
Q Consensus 1 ~~~~~~~~~il~~~~~---------------~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 (476)
|.+|.++|||++++.. ..|.-.....|++.|.++||+|++++.....................+.
T Consensus 1 m~~m~~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~g 80 (499)
T 2r60_A 1 MVEMTRIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYYQETNK 80 (499)
T ss_dssp ------CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCSEEECTTCSS
T ss_pred CccccccceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhhHHhccCCCC
Confidence 8889989999999842 3567788999999999999999999874332110110000000000234
Q ss_pred eeEEecCCCCCCCCCCCCCcHHHHHHHHHhhchHHHHHHHhcCCCCceEEEECCCcc--hHHHHHHHcCCCeEEEecCch
Q 011832 66 FQFKTISDGLPADHPRAGDQLMEMFDSLSLNTRPLLKQMLIDTSPPVSCIIGDACME--FVVDVATELEIPVIHFRAISA 143 (476)
Q Consensus 66 i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~DlvI~D~~~~--~~~~vA~~l~iP~i~~~~~~~ 143 (476)
+.+..++..... ..........+..+ ...+..++++...+||+|.+..... .+..++..+++|+|.......
T Consensus 81 v~v~~~~~~~~~--~~~~~~~~~~~~~~----~~~l~~~l~~~~~~~Divh~~~~~~~~~~~~~~~~~~~p~v~~~H~~~ 154 (499)
T 2r60_A 81 VRIVRIPFGGDK--FLPKEELWPYLHEY----VNKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGHSLG 154 (499)
T ss_dssp EEEEEECCSCSS--CCCGGGCGGGHHHH----HHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHCCCEEEECSSCH
T ss_pred eEEEEecCCCcC--CcCHHHHHHHHHHH----HHHHHHHHHhcCCCCCEEEEcCCcchHHHHHHHHhcCCcEEEEccCcc
Confidence 666666522111 00011111111111 1234555655212799999865432 334467788999987655432
Q ss_pred HHHHHHHhhhHHHhhCCCCCCcCCccccccccccCCCCcccccCCCCCccccCCCCchHHHHHHHHhhcCCCCcEEEEcc
Q 011832 144 CSFWAYFSIPEMIQAGELPMKAYDEDMDRLITKVPGMETFLRFRDLPSFCRVSDVTDRDLQVLKNATQQSPRAHALILNT 223 (476)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s 223 (476)
.... . ..... +... ..... ....... ..........+|.+++.|
T Consensus 155 ~~~~-----~-----~~~~~---------------~~~~--------~~~~~--~~~~~~~-~~~~~~~~~~ad~vi~~S 198 (499)
T 2r60_A 155 AQKM-----E-----KLNVN---------------TSNF--------KEMDE--RFKFHRR-IIAERLTMSYADKIIVST 198 (499)
T ss_dssp HHHH-----H-----TTCCC---------------STTS--------HHHHH--HHCHHHH-HHHHHHHHHHCSEEEESS
T ss_pred cccc-----h-----hhccC---------------CCCc--------chhhh--hHHHHHH-HHHHHHHHhcCCEEEECC
Confidence 1100 0 00000 0000 00000 0000000 000012235688899988
Q ss_pred hhhcchHHHHHHHhh----------CC-CeeeeCCCcccccccccccccccccccccCCccccchhhhhhhc-----CCC
Q 011832 224 FEDLEEPILSHIRTK----------CP-KVYTIGPLHLQLKTRFASNMISSSSQKSLNSLWEVDRSCIEWLG-----KQP 287 (476)
Q Consensus 224 ~~~l~~~~l~~~~~~----------~p-~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~ 287 (476)
....+.- ... .+ ++..|..-.....-. +.+ .- +....+.+-++ ..
T Consensus 199 ~~~~~~~-----~~~~~~g~~~~~~~~~ki~vi~ngvd~~~~~--------~~~----~~-~~~~~~r~~~~~~~~~~~- 259 (499)
T 2r60_A 199 SQERFGQ-----YSHDLYRGAVNVEDDDKFSVIPPGVNTRVFD--------GEY----GD-KIKAKITKYLERDLGSER- 259 (499)
T ss_dssp HHHHHHT-----TTSGGGTTTCCTTCGGGEEECCCCBCTTTSS--------SCC----CH-HHHHHHHHHHHHHSCGGG-
T ss_pred HHHHHHH-----HhhhcccccccccCCCCeEEECCCcChhhcC--------ccc----hh-hhHHHHHHHhcccccccC-
Confidence 7543321 111 11 333332211100000 000 00 00012222222 11
Q ss_pred CCeEEEEEeccccccCHHHHHHHHHHHHhcCC-----ceEEEECCCCCC----Cc--------hhhHHHHHH--hhcCCc
Q 011832 288 VRSVLYVSFGSITLLKREQLIEFWHGLVDSKQ-----RFLWVIRPDSVI----GE--------GDALAELVE--GTKERG 348 (476)
Q Consensus 288 ~~~~I~vs~Gs~~~~~~~~~~~~~~a~~~~~~-----~~i~~~~~~~~~----~~--------~~~l~~~~~--~~~~nv 348 (476)
++..+++..|... +...+..+++++..+.. ..++.++..... +. ...+..+.. .+.++|
T Consensus 260 ~~~~~i~~vGrl~--~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V 337 (499)
T 2r60_A 260 MELPAIIASSRLD--QKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKV 337 (499)
T ss_dssp TTSCEEEECSCCC--GGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTE
T ss_pred CCCcEEEEeecCc--cccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCceE
Confidence 2234677788774 23445667777766532 235555542111 00 123333323 246789
Q ss_pred eEeeccChH---HHhhcc----cccccccc----cCchhHHHHHhhCCceeccCCcccchhhHHHHHhhhcceeeccccc
Q 011832 349 LLVSWVPQE---EVLAHQ----AVAGFLTH----SGWNSTLESIVAGVPMICWPYFADQQINSRFVSEVWNLGLDMKDVC 417 (476)
Q Consensus 349 ~~~~~~pq~---~lL~~~----~~~~~I~H----GG~~s~~eal~~GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~~~~~ 417 (476)
.+.+++|+. +++..+ ++ +|.- |--.++.||+++|+|+|+... ......+ +.-..|..++ .-
T Consensus 338 ~~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v-~~~~~g~l~~-~~ 409 (499)
T 2r60_A 338 SMFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEIL-DGGKYGVLVD-PE 409 (499)
T ss_dssp EEEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHT-GGGTSSEEEC-TT
T ss_pred EECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHh-cCCceEEEeC-CC
Confidence 999999875 478888 88 6632 334589999999999999854 3344555 5534777775 35
Q ss_pred CHHHHHHHHHHHHhH
Q 011832 418 DRNVVEKMVNDLMVE 432 (476)
Q Consensus 418 ~~~~l~~~i~~~l~~ 432 (476)
+.++++++|.+++++
T Consensus 410 d~~~la~~i~~ll~~ 424 (499)
T 2r60_A 410 DPEDIARGLLKAFES 424 (499)
T ss_dssp CHHHHHHHHHHHHSC
T ss_pred CHHHHHHHHHHHHhC
Confidence 889999999999985
No 29
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.33 E-value=1.2e-09 Score=109.19 Aligned_cols=355 Identities=12% Similarity=0.064 Sum_probs=177.4
Q ss_pred CCCCEEEEEcC-----------CCccCHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhcccccccccCCCCeeEEecCC
Q 011832 5 PKSPHILIFPL-----------PCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHERLIRYTDIHDRFLQYSEFQFKTISD 73 (476)
Q Consensus 5 ~~~~~il~~~~-----------~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~ 73 (476)
.+.|||++++. ...|+-.....|++.|.++||+|++++....... .... ...+.+.+..++.
T Consensus 18 ~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~-~~~~------~~~~~v~v~~~~~ 90 (438)
T 3c48_A 18 GSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQ-GEIV------RVAENLRVINIAA 90 (438)
T ss_dssp -CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGG-CSEE------EEETTEEEEEECC
T ss_pred cchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCC-cccc------cccCCeEEEEecC
Confidence 45689999994 2357888999999999999999999997533111 0000 0112356655542
Q ss_pred CCCCCCCCCCCcHHHHHHHHHhhchHHHHHH-HhcCCCCceEEEECCCcc--hHHHHHHHcCCCeEEEecCchHHHHHHH
Q 011832 74 GLPADHPRAGDQLMEMFDSLSLNTRPLLKQM-LIDTSPPVSCIIGDACME--FVVDVATELEIPVIHFRAISACSFWAYF 150 (476)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-l~~~~~~~DlvI~D~~~~--~~~~vA~~l~iP~i~~~~~~~~~~~~~~ 150 (476)
..... . ........+..+. ..+.+. ++.. .+||+|++..... .+..++..+++|+|..........
T Consensus 91 ~~~~~-~-~~~~~~~~~~~~~----~~~~~~~~~~~-~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~---- 159 (438)
T 3c48_A 91 GPYEG-L-SKEELPTQLAAFT----GGMLSFTRREK-VTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVK---- 159 (438)
T ss_dssp SCSSS-C-CGGGGGGGHHHHH----HHHHHHHHHHT-CCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHHH----
T ss_pred CCccc-c-chhHHHHHHHHHH----HHHHHHHHhcc-CCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCcccc----
Confidence 21110 0 0111111111111 112222 4433 2499999875433 334567788999988755432110
Q ss_pred hhhHHHhhCCCCCCcCCccccccccccCCCCcccccCCCCCccccCCCCchHHHHHHHHhhcCCCCcEEEEcchhhcchH
Q 011832 151 SIPEMIQAGELPMKAYDEDMDRLITKVPGMETFLRFRDLPSFCRVSDVTDRDLQVLKNATQQSPRAHALILNTFEDLEEP 230 (476)
Q Consensus 151 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~ 230 (476)
. .. +.. ... . ........ .......+|.+++.|....+.-
T Consensus 160 ~-------~~-------------------~~~----~~~---~-----~~~~~~~~--~~~~~~~~d~ii~~s~~~~~~~ 199 (438)
T 3c48_A 160 N-------SY-------------------RDD----SDT---P-----ESEARRIC--EQQLVDNADVLAVNTQEEMQDL 199 (438)
T ss_dssp S-------CC---------------------------CC---H-----HHHHHHHH--HHHHHHHCSEEEESSHHHHHHH
T ss_pred c-------cc-------------------ccc----cCC---c-----chHHHHHH--HHHHHhcCCEEEEcCHHHHHHH
Confidence 0 00 000 000 0 00000000 0122356889999987654332
Q ss_pred HHHHHHh-h--CC-CeeeeCCCcccccccccccccccccccccCCccccchhhhhhhcCCCCCeEEEEEeccccccCHHH
Q 011832 231 ILSHIRT-K--CP-KVYTIGPLHLQLKTRFASNMISSSSQKSLNSLWEVDRSCIEWLGKQPVRSVLYVSFGSITLLKREQ 306 (476)
Q Consensus 231 ~l~~~~~-~--~p-~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~Gs~~~~~~~~ 306 (476)
.. . .+ ++..|..-.....-. +.+ . .....+.+-+.-. ++..+++..|+... ...
T Consensus 200 -----~~~~g~~~~k~~vi~ngvd~~~~~--------~~~----~--~~~~~~r~~~~~~-~~~~~i~~~G~~~~--~Kg 257 (438)
T 3c48_A 200 -----MHHYDADPDRISVVSPGADVELYS--------PGN----D--RATERSRRELGIP-LHTKVVAFVGRLQP--FKG 257 (438)
T ss_dssp -----HHHHCCCGGGEEECCCCCCTTTSC--------CC----------CHHHHHHTTCC-SSSEEEEEESCBSG--GGC
T ss_pred -----HHHhCCChhheEEecCCccccccC--------Ccc----c--chhhhhHHhcCCC-CCCcEEEEEeeecc--cCC
Confidence 22 1 11 344444322111100 000 0 0001123333221 23456777888752 233
Q ss_pred HHHHHHHHHhc----C-Cce-EEEECCCCC-CCchhhHHHHHHh--hcCCceEeeccChH---HHhhcccccccccc---
Q 011832 307 LIEFWHGLVDS----K-QRF-LWVIRPDSV-IGEGDALAELVEG--TKERGLLVSWVPQE---EVLAHQAVAGFLTH--- 371 (476)
Q Consensus 307 ~~~~~~a~~~~----~-~~~-i~~~~~~~~-~~~~~~l~~~~~~--~~~nv~~~~~~pq~---~lL~~~~~~~~I~H--- 371 (476)
...+++++..+ + .++ ++.++.... ......+..+..+ +.++|.+.+++|+. ++|..+++ +|.-
T Consensus 258 ~~~li~a~~~l~~~~p~~~~~l~i~G~~~~~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~ 335 (438)
T 3c48_A 258 PQVLIKAVAALFDRDPDRNLRVIICGGPSGPNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFN 335 (438)
T ss_dssp HHHHHHHHHHHHHHCTTCSEEEEEECCBC------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSC
T ss_pred HHHHHHHHHHHHhhCCCcceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccc
Confidence 34444554432 1 122 333443110 0111233333332 45789999999874 58888898 6643
Q ss_pred -cCchhHHHHHhhCCceeccCCcccchhhHHHHHhhhcceeecccccCHHHHHHHHHHHHhH--hHHHHHHHHHHHHHH
Q 011832 372 -SGWNSTLESIVAGVPMICWPYFADQQINSRFVSEVWNLGLDMKDVCDRNVVEKMVNDLMVE--RKEEFMRAADRMATM 447 (476)
Q Consensus 372 -GG~~s~~eal~~GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~l~~~i~~~l~~--~~~~y~~~a~~~~~~ 447 (476)
|...++.||+++|+|+|+.+. ......+ +..+.|..++ .-+.++++++|.+++++ ....+.+++++..+.
T Consensus 336 e~~~~~~~Eama~G~PvI~~~~----~~~~e~i-~~~~~g~~~~-~~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~ 408 (438)
T 3c48_A 336 ESFGLVAMEAQASGTPVIAARV----GGLPIAV-AEGETGLLVD-GHSPHAWADALATLLDDDETRIRMGEDAVEHART 408 (438)
T ss_dssp CSSCHHHHHHHHTTCCEEEESC----TTHHHHS-CBTTTEEEES-SCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred cCCchHHHHHHHcCCCEEecCC----CChhHHh-hCCCcEEECC-CCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHh
Confidence 334689999999999999754 3445555 5545777775 35889999999999985 112334444444443
No 30
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.32 E-value=1.9e-09 Score=107.39 Aligned_cols=394 Identities=10% Similarity=0.031 Sum_probs=191.7
Q ss_pred CCCEEEEEcCC-----CccCHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhh---------cccccccccCCCCeeEEec
Q 011832 6 KSPHILIFPLP-----CQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHERLIR---------YTDIHDRFLQYSEFQFKTI 71 (476)
Q Consensus 6 ~~~~il~~~~~-----~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~---------~~~~~~~~~~~~~i~~~~l 71 (476)
++|||++++.. ..|--.-+..|++.|+++||+|+++++......-.. ...........+++.+..+
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence 47999999832 345556689999999999999999997432111000 0000000001123555554
Q ss_pred CCCCCCCCCCCCCcH----HHHHHHHHhhchHHHHHHHhcCCCCceEEEECCCcc--hHHHHHHHcCCCeEEEecCchHH
Q 011832 72 SDGLPADHPRAGDQL----MEMFDSLSLNTRPLLKQMLIDTSPPVSCIIGDACME--FVVDVATELEIPVIHFRAISACS 145 (476)
Q Consensus 72 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~ll~~~~~~~DlvI~D~~~~--~~~~vA~~l~iP~i~~~~~~~~~ 145 (476)
+...-. ........ ...+..+.......+..++... .+||+|.+..... .+..++...++|+|.........
T Consensus 81 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~ 158 (439)
T 3fro_A 81 GGGLLD-SEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREE-PLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRLNKS 158 (439)
T ss_dssp ESGGGG-CSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTS-CCCSEEEEESGGGHHHHHHHHHHHCCCEEEEESCCCCC
T ss_pred cchhcc-ccccccCCcchhhhhhHHHHHHHHHHHHHHhccC-CCCeEEEecchhhhhhHHHHhhccCCCEEEEecccccc
Confidence 421100 00011101 1111122222233333333322 4899999875544 24556778899999876543200
Q ss_pred HHHHHhhhHHHhhCCCCCCcCCccccccccccCCCCcccccCCCCCccccCCCCchHHHHHHHHhhcCCCCcEEEEcchh
Q 011832 146 FWAYFSIPEMIQAGELPMKAYDEDMDRLITKVPGMETFLRFRDLPSFCRVSDVTDRDLQVLKNATQQSPRAHALILNTFE 225 (476)
Q Consensus 146 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~ 225 (476)
.+.........+.. .... . .....+ .....+|.+++.|..
T Consensus 159 -----------------------~~~~~~~~~~~~~~-~~~~---------~-~~~~~~------~~~~~ad~ii~~S~~ 198 (439)
T 3fro_A 159 -----------------------KLPAFYFHEAGLSE-LAPY---------P-DIDPEH------TGGYIADIVTTVSRG 198 (439)
T ss_dssp -----------------------CEEHHHHHHTTCGG-GCCS---------S-EECHHH------HHHHHCSEEEESCHH
T ss_pred -----------------------cCchHHhCcccccc-cccc---------c-eeeHhh------hhhhhccEEEecCHH
Confidence 00000000000000 0000 0 001111 112467888888876
Q ss_pred hcchHHHHHHHhhCCCeeeeCCCccccc-ccccccccccccccccCCccccchhhhhhhcCCCCCeEEEEEeccccccCH
Q 011832 226 DLEEPILSHIRTKCPKVYTIGPLHLQLK-TRFASNMISSSSQKSLNSLWEVDRSCIEWLGKQPVRSVLYVSFGSITLLKR 304 (476)
Q Consensus 226 ~l~~~~l~~~~~~~p~~~~vG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~Gs~~~~~~ 304 (476)
..+.. ...+.-...++..|..-..... .+. ..+ ..--+....+.+-++-. ++ .+++..|+... +.
T Consensus 199 ~~~~~-~~~~~~~~~~i~vi~ngvd~~~~~~~-------~~~---~~~~~~~~~~~~~~~~~-~~-~~i~~~G~~~~-~~ 264 (439)
T 3fro_A 199 YLIDE-WGFFRNFEGKITYVFNGIDCSFWNES-------YLT---GSRDERKKSLLSKFGMD-EG-VTFMFIGRFDR-GQ 264 (439)
T ss_dssp HHHHT-HHHHGGGTTSEEECCCCCCTTTSCGG-------GSC---SCHHHHHHHHHHHHTCC-SC-EEEEEECCSSC-TT
T ss_pred HHHHH-hhhhhhcCCceeecCCCCCchhcCcc-------ccc---chhhhhHHHHHHHcCCC-CC-cEEEEEccccc-cc
Confidence 54441 1111112224444432221100 000 000 00000122333334332 33 67778888750 12
Q ss_pred HHHHHHHHHHHhc-------CCceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccChHH---Hhhccccccccc----
Q 011832 305 EQLIEFWHGLVDS-------KQRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQEE---VLAHQAVAGFLT---- 370 (476)
Q Consensus 305 ~~~~~~~~a~~~~-------~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq~~---lL~~~~~~~~I~---- 370 (476)
..+..++++++.+ +.++++. +.+. ......+..+..+.++++.+.+|+|+.+ ++..+++ +|.
T Consensus 265 Kg~~~li~a~~~l~~~~~~~~~~l~i~-G~g~-~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~adv--~v~ps~~ 340 (439)
T 3fro_A 265 KGVDVLLKAIEILSSKKEFQEMRFIII-GKGD-PELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDF--VIIPSYF 340 (439)
T ss_dssp BCHHHHHHHHHHHHTSGGGGGEEEEEE-CCCC-HHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSE--EEECBSC
T ss_pred ccHHHHHHHHHHHHhcccCCCeEEEEE-cCCC-hhHHHHHHHHHhhcCCEEEEcCCCCHHHHHHHHHHCCE--EEeCCCC
Confidence 2334445554433 2343333 3221 0000233455555665566789899864 7888888 553
Q ss_pred ccCchhHHHHHhhCCceeccCCcccchhhHHHHHhhhcceeecccccCHHHHHHHHHHHHh-HhHHHHHHHHHHHHHHHH
Q 011832 371 HSGWNSTLESIVAGVPMICWPYFADQQINSRFVSEVWNLGLDMKDVCDRNVVEKMVNDLMV-ERKEEFMRAADRMATMAR 449 (476)
Q Consensus 371 HGG~~s~~eal~~GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~l~~~i~~~l~-~~~~~y~~~a~~~~~~~~ 449 (476)
-|-.+++.||+++|+|+|+... ......+ +. |.|..++ .-+.++++++|.++++ + +..+ +++++..+
T Consensus 341 e~~~~~~~EAma~G~Pvi~s~~----~~~~e~~-~~-~~g~~~~-~~d~~~la~~i~~ll~~~--~~~~---~~~~~~~~ 408 (439)
T 3fro_A 341 EPFGLVALEAMCLGAIPIASAV----GGLRDII-TN-ETGILVK-AGDPGELANAILKALELS--RSDL---SKFRENCK 408 (439)
T ss_dssp CSSCHHHHHHHHTTCEEEEESS----THHHHHC-CT-TTCEEEC-TTCHHHHHHHHHHHHHHT--TTTT---HHHHHHHH
T ss_pred CCccHHHHHHHHCCCCeEEcCC----CCcceeE-Ec-CceEEeC-CCCHHHHHHHHHHHHhcC--HHHH---HHHHHHHH
Confidence 2345699999999999999743 3444555 54 7887776 3589999999999998 4 2222 22333333
Q ss_pred HHHhcCCChHHHHHHHHHHHHhh
Q 011832 450 TTANEGGPSYCNLDRLIDDIKMM 472 (476)
Q Consensus 450 ~~~~~~g~~~~~~~~~i~~~~~~ 472 (476)
+.+ +.-+-.+.++++++.+.+.
T Consensus 409 ~~~-~~~s~~~~~~~~~~~~~~~ 430 (439)
T 3fro_A 409 KRA-MSFSWEKSAERYVKAYTGS 430 (439)
T ss_dssp HHH-HTSCHHHHHHHHHHHHHTC
T ss_pred HHH-hhCcHHHHHHHHHHHHHHH
Confidence 322 2356667777777766554
No 31
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.29 E-value=9.5e-10 Score=107.82 Aligned_cols=131 Identities=13% Similarity=0.155 Sum_probs=84.4
Q ss_pred CCeEEEEEeccccccCHHHHHHHHHHHHhc-----CCceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccCh---HHH
Q 011832 288 VRSVLYVSFGSITLLKREQLIEFWHGLVDS-----KQRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQ---EEV 359 (476)
Q Consensus 288 ~~~~I~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq---~~l 359 (476)
++++|+++.|...... ..+..+++++..+ +.++++..+.+. ...+.+.++.+ ..++|.+.+++++ .++
T Consensus 204 ~~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~~--~~~~~l~~~~~-~~~~v~~~g~~~~~~~~~~ 279 (384)
T 1vgv_A 204 DKKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYPVHLNP--NVREPVNRILG-HVKNVILIDPQEYLPFVWL 279 (384)
T ss_dssp TSEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBCH--HHHHHHHHHHT-TCTTEEEECCCCHHHHHHH
T ss_pred CCCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCCH--HHHHHHHHHhh-cCCCEEEeCCCCHHHHHHH
Confidence 4567888888765322 3345566666543 234444323210 00112222211 1368888776664 468
Q ss_pred hhcccccccccccCchhHHHHHhhCCceeccCCcccchhhHHHHHhhhcceeecccccCHHHHHHHHHHHHhH
Q 011832 360 LAHQAVAGFLTHSGWNSTLESIVAGVPMICWPYFADQQINSRFVSEVWNLGLDMKDVCDRNVVEKMVNDLMVE 432 (476)
Q Consensus 360 L~~~~~~~~I~HGG~~s~~eal~~GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~l~~~i~~~l~~ 432 (476)
|+.+++ ||+.+| +.+.||+++|+|+|+.+..++.. .+++. |.|..++. +.++|+++|.++++|
T Consensus 280 ~~~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~----e~v~~-g~g~lv~~--d~~~la~~i~~ll~d 342 (384)
T 1vgv_A 280 MNHAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTERP----EAVTA-GTVRLVGT--DKQRIVEEVTRLLKD 342 (384)
T ss_dssp HHHCSE--EEESSS-TGGGTGGGGTCCEEEESSCCSCH----HHHHH-TSEEEECS--SHHHHHHHHHHHHHC
T ss_pred HHhCcE--EEECCc-chHHHHHHcCCCEEEccCCCCcc----hhhhC-CceEEeCC--CHHHHHHHHHHHHhC
Confidence 999998 998875 34889999999999998754433 23254 88888864 899999999999986
No 32
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.29 E-value=2.4e-10 Score=112.69 Aligned_cols=331 Identities=11% Similarity=0.093 Sum_probs=172.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhC-CCEEEEEeCCcchh---hhhhcccccccccCCCCeeEEecCCCCCCCCCC
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFGLA-GLKVTFLNSKHNHE---RLIRYTDIHDRFLQYSEFQFKTISDGLPADHPR 81 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~~r-GH~Vt~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~ 81 (476)
++|||+++. +++....-+..|.++|.++ |+++.++.+....+ .+.+..+ ..++. .+ .- +.
T Consensus 24 ~m~ki~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~~~~------i~~~~---~l----~~--~~ 87 (396)
T 3dzc_A 24 AMKKVLIVF-GTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLELFS------ITPDF---DL----NI--ME 87 (396)
T ss_dssp CCEEEEEEE-CSHHHHHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHHHTT------CCCSE---EC----CC--CC
T ss_pred CCCeEEEEE-eccHhHHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhcC------CCCce---ee----ec--CC
Confidence 346888877 8888888899999999997 78887665544322 1111111 00111 11 10 01
Q ss_pred CCCcHHHHHHHHHhhchHHHHHHHhcCCCCceEEEEC--CCc-chHHHHHHHcCCCeEEEecCchHHHHHHHhhhHHHhh
Q 011832 82 AGDQLMEMFDSLSLNTRPLLKQMLIDTSPPVSCIIGD--ACM-EFVVDVATELEIPVIHFRAISACSFWAYFSIPEMIQA 158 (476)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~DlvI~D--~~~-~~~~~vA~~l~iP~i~~~~~~~~~~~~~~~~~~~~~~ 158 (476)
...+..... ......+.+++++. +||+|++- ..+ ..+..+|..+|||++.+....
T Consensus 88 ~~~~~~~~~----~~~~~~l~~~l~~~--kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ag~---------------- 145 (396)
T 3dzc_A 88 PGQTLNGVT----SKILLGMQQVLSSE--QPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAGL---------------- 145 (396)
T ss_dssp TTCCHHHHH----HHHHHHHHHHHHHH--CCSEEEEETTSHHHHHHHHHHHTTTCCEEEETCCC----------------
T ss_pred CCCCHHHHH----HHHHHHHHHHHHhc--CCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCc----------------
Confidence 111222221 22234577788887 89999862 233 244678899999988753210
Q ss_pred CCCCCCcCCccccccccccCCCCcccccCCCCCccccCCCCchHHHHHHHHhhcCCCCcEEEEcchhhcchHHHHHHHhh
Q 011832 159 GELPMKAYDEDMDRLITKVPGMETFLRFRDLPSFCRVSDVTDRDLQVLKNATQQSPRAHALILNTFEDLEEPILSHIRTK 238 (476)
Q Consensus 159 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~l~~~~~~ 238 (476)
. . ..++ ....+...+... ...++.+++.+...-+.-. +--
T Consensus 146 -----r-----------------s-~~~~--------~~~~~~~~r~~~-----~~~a~~~~~~se~~~~~l~----~~G 185 (396)
T 3dzc_A 146 -----R-----------------T-GNIY--------SPWPEEGNRKLT-----AALTQYHFAPTDTSRANLL----QEN 185 (396)
T ss_dssp -----C-----------------C-SCTT--------SSTTHHHHHHHH-----HHTCSEEEESSHHHHHHHH----HTT
T ss_pred -----c-----------------c-cccc--------cCCcHHHHHHHH-----HHhcCEEECCCHHHHHHHH----HcC
Confidence 0 0 0000 000011111111 1346777777765422210 111
Q ss_pred CC--CeeeeCCCcccccccccccccccccccccCCccccchhhhhhhcC-CCCCeEEEEEeccccccCHHHHHHHHHHHH
Q 011832 239 CP--KVYTIGPLHLQLKTRFASNMISSSSQKSLNSLWEVDRSCIEWLGK-QPVRSVLYVSFGSITLLKREQLIEFWHGLV 315 (476)
Q Consensus 239 ~p--~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~I~vs~Gs~~~~~~~~~~~~~~a~~ 315 (476)
.+ ++..+|....+.-...+. ... ..+ ....++.+.++- .+++++|+++.+-..+... .+..+++++.
T Consensus 186 ~~~~ki~vvGn~~~d~~~~~~~-----~~~--~~~--~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~~-~~~~ll~A~~ 255 (396)
T 3dzc_A 186 YNAENIFVTGNTVIDALLAVRE-----KIH--TDM--DLQATLESQFPMLDASKKLILVTGHRRESFGG-GFERICQALI 255 (396)
T ss_dssp CCGGGEEECCCHHHHHHHHHHH-----HHH--HCH--HHHHHHHHTCTTCCTTSEEEEEECSCBCCCTT-HHHHHHHHHH
T ss_pred CCcCcEEEECCcHHHHHHHhhh-----hcc--cch--hhHHHHHHHhCccCCCCCEEEEEECCcccchh-HHHHHHHHHH
Confidence 22 578888543321100000 000 000 000223333321 1245677776522122222 2456777765
Q ss_pred hc-----CCceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccCh---HHHhhcccccccccccCchhHHHHHhhCCce
Q 011832 316 DS-----KQRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQ---EEVLAHQAVAGFLTHSGWNSTLESIVAGVPM 387 (476)
Q Consensus 316 ~~-----~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq---~~lL~~~~~~~~I~HGG~~s~~eal~~GvP~ 387 (476)
.+ +.++++..+.+. ...+.+..+. ...+++.+.+++++ ..+++.+++ +|+-.| |.+.||.++|+|+
T Consensus 256 ~l~~~~~~~~~v~~~g~~~--~~~~~l~~~~-~~~~~v~~~~~lg~~~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~Pv 329 (396)
T 3dzc_A 256 TTAEQHPECQILYPVHLNP--NVREPVNKLL-KGVSNIVLIEPQQYLPFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPV 329 (396)
T ss_dssp HHHHHCTTEEEEEECCBCH--HHHHHHHHHT-TTCTTEEEECCCCHHHHHHHHHHCSE--EEESCS-GGGTTGGGGTCCE
T ss_pred HHHHhCCCceEEEEeCCCh--HHHHHHHHHH-cCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCc-cHHHHHHHcCCCE
Confidence 53 345555543220 0011122211 12468888777753 468889998 999887 6667999999999
Q ss_pred eccCCcccchhhHHHHHhhhcceeecccccCHHHHHHHHHHHHhHhHHHHHH
Q 011832 388 ICWPYFADQQINSRFVSEVWNLGLDMKDVCDRNVVEKMVNDLMVERKEEFMR 439 (476)
Q Consensus 388 l~iP~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~l~~~i~~~l~~~~~~y~~ 439 (476)
|++.-..+++ ..+ +. |.++.+.. +.+.|.+++.++|++ +..++
T Consensus 330 V~~~~~~~~~---e~v-~~-G~~~lv~~--d~~~l~~ai~~ll~d--~~~~~ 372 (396)
T 3dzc_A 330 LVMRETTERP---EAV-AA-GTVKLVGT--NQQQICDALSLLLTD--PQAYQ 372 (396)
T ss_dssp EECCSSCSCH---HHH-HH-TSEEECTT--CHHHHHHHHHHHHHC--HHHHH
T ss_pred EEccCCCcch---HHH-Hc-CceEEcCC--CHHHHHHHHHHHHcC--HHHHH
Confidence 9985555543 223 44 88866653 799999999999986 44443
No 33
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.28 E-value=2.6e-09 Score=105.36 Aligned_cols=343 Identities=12% Similarity=0.056 Sum_probs=178.4
Q ss_pred CCCCCEEEEEcCC---C-ccCHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhcccccccccCCCCeeEEecCCCCCCCC
Q 011832 4 KPKSPHILIFPLP---C-QSHMNSMLKLAEIFGLAGLKVTFLNSKHNHERLIRYTDIHDRFLQYSEFQFKTISDGLPADH 79 (476)
Q Consensus 4 ~~~~~~il~~~~~---~-~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~ 79 (476)
+.++|||+++... . .|.-.-...+++.|.++||+|++++............. .. ..+..++ ..
T Consensus 17 ~~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~-----~~---~~~~~~~----~~- 83 (406)
T 2gek_A 17 RGSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVV-----SG---GKAVPIP----YN- 83 (406)
T ss_dssp ----CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEE-----EC---CCCC----------
T ss_pred CCCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccc-----cC---CcEEecc----cc-
Confidence 4567999999832 2 46668899999999999999999998543221111000 00 0011111 00
Q ss_pred CCCCCcHHHHHHHHHhhchHHHHHHHhcCCCCceEEEECCCcc--hHHHHHHHcCCCeEEEecCchHHHHHHHhhhHHHh
Q 011832 80 PRAGDQLMEMFDSLSLNTRPLLKQMLIDTSPPVSCIIGDACME--FVVDVATELEIPVIHFRAISACSFWAYFSIPEMIQ 157 (476)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~DlvI~D~~~~--~~~~vA~~l~iP~i~~~~~~~~~~~~~~~~~~~~~ 157 (476)
...... .+.......+.+++++. +||+|++..... .+..++..+++|++..........
T Consensus 84 ----~~~~~~--~~~~~~~~~l~~~l~~~--~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~----------- 144 (406)
T 2gek_A 84 ----GSVARL--RFGPATHRKVKKWIAEG--DFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTSTTKS----------- 144 (406)
T ss_dssp -------------CCHHHHHHHHHHHHHH--CCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCCCSH-----------
T ss_pred ----CCcccc--cccHHHHHHHHHHHHhc--CCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcchhh-----------
Confidence 000000 00000123456667766 889999776554 345567778999998755311000
Q ss_pred hCCCCCCcCCccccccccccCCCCcccccCCCCCccccCCCCchHHHHHHHH-hhcCCCCcEEEEcchhhcchHHHHHHH
Q 011832 158 AGELPMKAYDEDMDRLITKVPGMETFLRFRDLPSFCRVSDVTDRDLQVLKNA-TQQSPRAHALILNTFEDLEEPILSHIR 236 (476)
Q Consensus 158 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~s~~~l~~~~l~~~~ 236 (476)
.+. ...... ......+|.+++.|....+.- .
T Consensus 145 -----------------~~~--------------------------~~~~~~~~~~~~~~d~ii~~s~~~~~~~-----~ 176 (406)
T 2gek_A 145 -----------------LTL--------------------------SVFQGILRPYHEKIIGRIAVSDLARRWQ-----M 176 (406)
T ss_dssp -----------------HHH--------------------------HHHHSTTHHHHTTCSEEEESSHHHHHHH-----H
T ss_pred -----------------hhH--------------------------HHHHHHHHHHHhhCCEEEECCHHHHHHH-----H
Confidence 000 000000 012367788888886543332 2
Q ss_pred hhCC--CeeeeCCCcccccccccccccccccccccCCccccchhhhhhhcCCCCCeEEEEEeccc-cccCHHHHHHHHHH
Q 011832 237 TKCP--KVYTIGPLHLQLKTRFASNMISSSSQKSLNSLWEVDRSCIEWLGKQPVRSVLYVSFGSI-TLLKREQLIEFWHG 313 (476)
Q Consensus 237 ~~~p--~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~Gs~-~~~~~~~~~~~~~a 313 (476)
...+ ++ .|..-.....-. .... ..-+ +++..+++..|+. .. ......++++
T Consensus 177 ~~~~~~~~-vi~~~v~~~~~~-------------------~~~~-~~~~---~~~~~~i~~~G~~~~~--~Kg~~~li~a 230 (406)
T 2gek_A 177 EALGSDAV-EIPNGVDVASFA-------------------DAPL-LDGY---PREGRTVLFLGRYDEP--RKGMAVLLAA 230 (406)
T ss_dssp HHHSSCEE-ECCCCBCHHHHH-------------------TCCC-CTTC---SCSSCEEEEESCTTSG--GGCHHHHHHH
T ss_pred HhcCCCcE-EecCCCChhhcC-------------------CCch-hhhc---cCCCeEEEEEeeeCcc--ccCHHHHHHH
Confidence 2222 33 443222111000 0000 0000 1122466777877 42 2334445555
Q ss_pred HHhc-----CCceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccChH---HHhhccccccccc----ccCc-hhHHHH
Q 011832 314 LVDS-----KQRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQE---EVLAHQAVAGFLT----HSGW-NSTLES 380 (476)
Q Consensus 314 ~~~~-----~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq~---~lL~~~~~~~~I~----HGG~-~s~~ea 380 (476)
+..+ +.++++. +.+. ...+..+...+.+||.+.+++|+. +++..+++ +|. +.|+ +++.||
T Consensus 231 ~~~l~~~~~~~~l~i~-G~~~----~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea 303 (406)
T 2gek_A 231 LPKLVARFPDVEILIV-GRGD----EDELREQAGDLAGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEA 303 (406)
T ss_dssp HHHHHTTSTTCEEEEE-SCSC----HHHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHH
T ss_pred HHHHHHHCCCeEEEEE-cCCc----HHHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHH
Confidence 5443 3344443 3331 123333333346789999999975 68889998 553 3444 489999
Q ss_pred HhhCCceeccCCcccchhhHHHHHhhhcceeecccccCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCChHH
Q 011832 381 IVAGVPMICWPYFADQQINSRFVSEVWNLGLDMKDVCDRNVVEKMVNDLMVERKEEFMRAADRMATMARTTANEGGPSYC 460 (476)
Q Consensus 381 l~~GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~l~~~i~~~l~~~~~~y~~~a~~~~~~~~~~~~~~g~~~~ 460 (476)
+++|+|+|+.+. ......+ +..+.|..++ .-+.+++.++|.+++++ +..++ ++++..++... .-+..+
T Consensus 304 ~a~G~PvI~~~~----~~~~e~i-~~~~~g~~~~-~~d~~~l~~~i~~l~~~--~~~~~---~~~~~~~~~~~-~~s~~~ 371 (406)
T 2gek_A 304 MAAGTAVVASDL----DAFRRVL-ADGDAGRLVP-VDDADGMAAALIGILED--DQLRA---GYVARASERVH-RYDWSV 371 (406)
T ss_dssp HHHTCEEEECCC----HHHHHHH-TTTTSSEECC-TTCHHHHHHHHHHHHHC--HHHHH---HHHHHHHHHGG-GGBHHH
T ss_pred HHcCCCEEEecC----CcHHHHh-cCCCceEEeC-CCCHHHHHHHHHHHHcC--HHHHH---HHHHHHHHHHH-hCCHHH
Confidence 999999999865 4455556 6545777765 35889999999999985 33322 22223232222 334455
Q ss_pred HHHHHHHHHHh
Q 011832 461 NLDRLIDDIKM 471 (476)
Q Consensus 461 ~~~~~i~~~~~ 471 (476)
..+++++.+.+
T Consensus 372 ~~~~~~~~~~~ 382 (406)
T 2gek_A 372 VSAQIMRVYET 382 (406)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 55555555443
No 34
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.23 E-value=7e-09 Score=101.18 Aligned_cols=319 Identities=11% Similarity=0.082 Sum_probs=166.8
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhC-C-CEEEEEeCCcchhhhhhcccccccccCCCCeeE-EecCCCCCCCC
Q 011832 3 EKPKSPHILIFPLPCQSHMNSMLKLAEIFGLA-G-LKVTFLNSKHNHERLIRYTDIHDRFLQYSEFQF-KTISDGLPADH 79 (476)
Q Consensus 3 ~~~~~~~il~~~~~~~gH~~p~l~La~~L~~r-G-H~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~l~~~~~~~~ 79 (476)
.|.++|||+++. ++.++......++++|.++ | |+|.++++....+...+.. ... .+.. ..+.-..
T Consensus 4 ~m~~~mkIl~v~-~~~~~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~~~~---- 71 (375)
T 3beo_A 4 DMTERLKVMTIF-GTRPEAIKMAPLVLELQKHPEKIESIVTVTAQHRQMLDQVL---SIF----GITPDFDLNIMK---- 71 (375)
T ss_dssp CCSSCEEEEEEE-CSHHHHHHHHHHHHHHTTCTTTEEEEEEECCSSSHHHHHHH---HHH----TCCCSEECCCCC----
T ss_pred CCCcCceEEEEe-cCcHHHHHHHHHHHHHHhCCCCCCeEEEEcCCCHHHHHHHH---HHc----CCCCccccccCC----
Confidence 356679999998 4577888889999999987 5 8887777644322211110 000 0111 1111000
Q ss_pred CCCCCcHHHHHHHHHhhchHHHHHHHhcCCCCceEEEECCCcc---hHHHHHHHcCCCeEEEecCchHHHHHHHhhhHHH
Q 011832 80 PRAGDQLMEMFDSLSLNTRPLLKQMLIDTSPPVSCIIGDACME---FVVDVATELEIPVIHFRAISACSFWAYFSIPEMI 156 (476)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~DlvI~D~~~~---~~~~vA~~l~iP~i~~~~~~~~~~~~~~~~~~~~ 156 (476)
...+...... .....+.+++++. +||+|++..... .+..++..+++|++.+....
T Consensus 72 --~~~~~~~~~~----~~~~~l~~~l~~~--~pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~-------------- 129 (375)
T 3beo_A 72 --DRQTLIDITT----RGLEGLDKVMKEA--KPDIVLVHGDTTTTFIASLAAFYNQIPVGHVEAGL-------------- 129 (375)
T ss_dssp --TTCCHHHHHH----HHHHHHHHHHHHH--CCSEEEEETTSHHHHHHHHHHHHTTCCEEEESCCC--------------
T ss_pred --CcccHHHHHH----HHHHHHHHHHHHh--CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccc--------------
Confidence 1111111111 1123356677776 899999854322 23456788999998642210
Q ss_pred hhCCCCCCcCCccccccccccCCCCcccccCCCCCccccCCCCchHHHHHHHHhhcCCCCcEEEEcchhhcchHHHHHHH
Q 011832 157 QAGELPMKAYDEDMDRLITKVPGMETFLRFRDLPSFCRVSDVTDRDLQVLKNATQQSPRAHALILNTFEDLEEPILSHIR 236 (476)
Q Consensus 157 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~l~~~~ 236 (476)
. . . + .+..+ .....+... ...+|.+++.|...-+.- .
T Consensus 130 -------~----------~-~----~--~~~~~---------~~~~~~~~~-----~~~~d~ii~~s~~~~~~~-----~ 166 (375)
T 3beo_A 130 -------R----------T-W----D--KYSPY---------PEEMNRQLT-----GVMADLHFSPTAKSATNL-----Q 166 (375)
T ss_dssp -------C----------C-S----C--TTSST---------THHHHHHHH-----HHHCSEEEESSHHHHHHH-----H
T ss_pred -------c----------c-c----c--ccCCC---------hhHhhhhHH-----hhhhheeeCCCHHHHHHH-----H
Confidence 0 0 0 0 00000 001111111 123677888776543322 2
Q ss_pred hh-CC--CeeeeCCCcccccccccccccccccccccCCccccchhhhhhhcCCCCCeEEEEEeccccccCHHHHHHHHHH
Q 011832 237 TK-CP--KVYTIGPLHLQLKTRFASNMISSSSQKSLNSLWEVDRSCIEWLGKQPVRSVLYVSFGSITLLKREQLIEFWHG 313 (476)
Q Consensus 237 ~~-~p--~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~Gs~~~~~~~~~~~~~~a 313 (476)
.. .+ ++..+|.-..+.....+. . ....++.+-+ +++++|+++.|...... ..+..++++
T Consensus 167 ~~g~~~~~i~vi~n~~~d~~~~~~~------~--------~~~~~~~~~~---~~~~~vl~~~gr~~~~~-K~~~~li~a 228 (375)
T 3beo_A 167 KENKDESRIFITGNTAIDALKTTVK------E--------TYSHPVLEKL---GNNRLVLMTAHRRENLG-EPMRNMFRA 228 (375)
T ss_dssp HTTCCGGGEEECCCHHHHHHHHHCC------S--------SCCCHHHHTT---TTSEEEEEECCCGGGTT-HHHHHHHHH
T ss_pred HcCCCcccEEEECChhHhhhhhhhh------h--------hhhHHHHHhc---cCCCeEEEEecccccch-hHHHHHHHH
Confidence 21 12 466666432211100000 0 0011122222 23456777888654221 345566777
Q ss_pred HHhc-----CCceEEEECCCCCCCchhhH-HHHHHhhc--CCceEeeccChH---HHhhcccccccccccCchhHHHHHh
Q 011832 314 LVDS-----KQRFLWVIRPDSVIGEGDAL-AELVEGTK--ERGLLVSWVPQE---EVLAHQAVAGFLTHSGWNSTLESIV 382 (476)
Q Consensus 314 ~~~~-----~~~~i~~~~~~~~~~~~~~l-~~~~~~~~--~nv~~~~~~pq~---~lL~~~~~~~~I~HGG~~s~~eal~ 382 (476)
+..+ +.++++ ..++ + ..+ ..+.+.+. +||.+.+++++. ++|..+++ ||+.+| +.+.||++
T Consensus 229 ~~~l~~~~~~~~~i~-~~g~----~-~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~~sg-~~~lEA~a 299 (375)
T 3beo_A 229 IKRLVDKHEDVQVVY-PVHM----N-PVVRETANDILGDYGRIHLIEPLDVIDFHNVAARSYL--MLTDSG-GVQEEAPS 299 (375)
T ss_dssp HHHHHHHCTTEEEEE-ECCS----C-HHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTCSE--EEECCH-HHHHHHHH
T ss_pred HHHHHhhCCCeEEEE-eCCC----C-HHHHHHHHHHhhccCCEEEeCCCCHHHHHHHHHhCcE--EEECCC-ChHHHHHh
Confidence 6543 234333 2221 1 112 22222222 689997777654 68888898 888764 45889999
Q ss_pred hCCceeccCCcccchhhHHHHHhhhcceeecccccCHHHHHHHHHHHHhH
Q 011832 383 AGVPMICWPYFADQQINSRFVSEVWNLGLDMKDVCDRNVVEKMVNDLMVE 432 (476)
Q Consensus 383 ~GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~l~~~i~~~l~~ 432 (476)
+|+|+|+....+.. ...+ +. |.|..++. +.++|+++|.++++|
T Consensus 300 ~G~Pvi~~~~~~~~---~e~v-~~-g~g~~v~~--d~~~la~~i~~ll~~ 342 (375)
T 3beo_A 300 LGVPVLVLRDTTER---PEGI-EA-GTLKLAGT--DEETIFSLADELLSD 342 (375)
T ss_dssp HTCCEEECSSCCSC---HHHH-HT-TSEEECCS--CHHHHHHHHHHHHHC
T ss_pred cCCCEEEecCCCCC---ceee-cC-CceEEcCC--CHHHHHHHHHHHHhC
Confidence 99999998543333 2234 54 88888763 899999999999986
No 35
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.20 E-value=9.5e-10 Score=106.09 Aligned_cols=125 Identities=14% Similarity=0.080 Sum_probs=87.2
Q ss_pred EEEEeccccccCHHHHHHHHHHHHhcCCceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccChH---HHhhccccccc
Q 011832 292 LYVSFGSITLLKREQLIEFWHGLVDSKQRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQE---EVLAHQAVAGF 368 (476)
Q Consensus 292 I~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq~---~lL~~~~~~~~ 368 (476)
+++..|... +......++++++.++.++++.-.++ ....+.++...+.+||.+.+|+|+. +++..+++ +
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~G~g~----~~~~l~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv--~ 235 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLAGPAW----EPEYFDEITRRYGSTVEPIGEVGGERRLDLLASAHA--V 235 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEESCCC----CHHHHHHHHHHHTTTEEECCCCCHHHHHHHHHHCSE--E
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEEeCcc----cHHHHHHHHHHhCCCEEEeccCCHHHHHHHHHhCCE--E
Confidence 455567765 34556667888877777766553322 1223344555566899999999986 68889998 5
Q ss_pred c--cc-----------cC-chhHHHHHhhCCceeccCCcccchhhHHHHHhh--hcceeecccccCHHHHHHHHHHHHh
Q 011832 369 L--TH-----------SG-WNSTLESIVAGVPMICWPYFADQQINSRFVSEV--WNLGLDMKDVCDRNVVEKMVNDLMV 431 (476)
Q Consensus 369 I--~H-----------GG-~~s~~eal~~GvP~l~iP~~~DQ~~na~~v~~~--~G~G~~~~~~~~~~~l~~~i~~~l~ 431 (476)
| +. -| -+++.||+++|+|+|+.... .+...+ +. -+.|..++. +.++++++|.++++
T Consensus 236 v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~----~~~e~~-~~~~~~~g~~~~~--d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 236 LAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNG----CLAEIV-PSVGEVVGYGTDF--APDEARRTLAGLPA 307 (342)
T ss_dssp EECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTT----THHHHG-GGGEEECCSSSCC--CHHHHHHHHHTSCC
T ss_pred EECCcccccccccccccCccHHHHHHHhcCCCEEEcCCC----ChHHHh-cccCCCceEEcCC--CHHHHHHHHHHHHH
Confidence 5 22 33 45899999999999998753 355555 54 457777764 99999999999886
No 36
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.09 E-value=1.9e-07 Score=90.86 Aligned_cols=131 Identities=17% Similarity=0.227 Sum_probs=89.6
Q ss_pred CeEEEEEeccccccCHHHHHHHHHHHHhcCC----c-eEEEECCCCCCCchhhHHHHHHh--hcCCceEeeccCh-HHHh
Q 011832 289 RSVLYVSFGSITLLKREQLIEFWHGLVDSKQ----R-FLWVIRPDSVIGEGDALAELVEG--TKERGLLVSWVPQ-EEVL 360 (476)
Q Consensus 289 ~~~I~vs~Gs~~~~~~~~~~~~~~a~~~~~~----~-~i~~~~~~~~~~~~~~l~~~~~~--~~~nv~~~~~~pq-~~lL 360 (476)
+..+++..|+.. +......+++++..+.. + -++.++.+. .+.+..+... +++|+.+.++..+ .+++
T Consensus 195 ~~~~i~~~G~~~--~~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~----~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~ 268 (374)
T 2iw1_A 195 QQNLLLQVGSDF--GRKGVDRSIEALASLPESLRHNTLLFVVGQDK----PRKFEALAEKLGVRSNVHFFSGRNDVSELM 268 (374)
T ss_dssp TCEEEEEECSCT--TTTTHHHHHHHHHTSCHHHHHTEEEEEESSSC----CHHHHHHHHHHTCGGGEEEESCCSCHHHHH
T ss_pred CCeEEEEeccch--hhcCHHHHHHHHHHhHhccCCceEEEEEcCCC----HHHHHHHHHHcCCCCcEEECCCcccHHHHH
Confidence 346777788764 23445667777776532 1 234444331 1233333332 3578999888654 5699
Q ss_pred hccccccccc----ccCchhHHHHHhhCCceeccCCcccchhhHHHHHhhhcceeecccccCHHHHHHHHHHHHhH
Q 011832 361 AHQAVAGFLT----HSGWNSTLESIVAGVPMICWPYFADQQINSRFVSEVWNLGLDMKDVCDRNVVEKMVNDLMVE 432 (476)
Q Consensus 361 ~~~~~~~~I~----HGG~~s~~eal~~GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~l~~~i~~~l~~ 432 (476)
..+++ +|. -|..+++.||+++|+|+|+... ..+...+ +..+.|..++..-+.+++.++|.+++++
T Consensus 269 ~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i-~~~~~g~~~~~~~~~~~l~~~i~~l~~~ 337 (374)
T 2iw1_A 269 AAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYI-ADANCGTVIAEPFSQEQLNEVLRKALTQ 337 (374)
T ss_dssp HHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHH-HHHTCEEEECSSCCHHHHHHHHHHHHHC
T ss_pred HhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhh-ccCCceEEeCCCCCHHHHHHHHHHHHcC
Confidence 99998 665 4667889999999999999765 3455666 6657888886456899999999999985
No 37
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.05 E-value=5.5e-08 Score=96.30 Aligned_cols=163 Identities=12% Similarity=0.017 Sum_probs=93.8
Q ss_pred EEEEEeccccccCHHHHHHHHHHHHhc-----CCceEEEECCCCCCCc-hhhHHHHHHh--hcCCceEeeccC---h---
Q 011832 291 VLYVSFGSITLLKREQLIEFWHGLVDS-----KQRFLWVIRPDSVIGE-GDALAELVEG--TKERGLLVSWVP---Q--- 356 (476)
Q Consensus 291 ~I~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~~~~~-~~~l~~~~~~--~~~nv~~~~~~p---q--- 356 (476)
.+++..|.... ...+..+++++..+ +.++++.-.++..... ...+..+... +.++|.+.+|++ +
T Consensus 232 ~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~ 309 (416)
T 2x6q_A 232 PIITQVSRFDP--WKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREV 309 (416)
T ss_dssp CEEEEECCCCT--TSCHHHHHHHHHHHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHH
T ss_pred cEEEEEecccc--ccCHHHHHHHHHHHHHhCCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHH
Confidence 45666787752 22233444444432 4566655443311000 1122333222 357899998876 2
Q ss_pred HHHhhccccccccccc----CchhHHHHHhhCCceeccCCcccchhhHHHHHhhhcceeecccccCHHHHHHHHHHHHhH
Q 011832 357 EEVLAHQAVAGFLTHS----GWNSTLESIVAGVPMICWPYFADQQINSRFVSEVWNLGLDMKDVCDRNVVEKMVNDLMVE 432 (476)
Q Consensus 357 ~~lL~~~~~~~~I~HG----G~~s~~eal~~GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~l~~~i~~~l~~ 432 (476)
.+++..+++ +|.-. ...++.||+++|+|+|+.+. ..+...+ +..+.|..++ +.++++++|.+++++
T Consensus 310 ~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i-~~~~~g~l~~---d~~~la~~i~~ll~~ 379 (416)
T 2x6q_A 310 NAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQI-VDGETGFLVR---DANEAVEVVLYLLKH 379 (416)
T ss_dssp HHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHC-CBTTTEEEES---SHHHHHHHHHHHHHC
T ss_pred HHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhhe-ecCCCeEEEC---CHHHHHHHHHHHHhC
Confidence 358888888 66543 45689999999999999764 3455555 5545787775 899999999999985
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 011832 433 RKEEFMRAADRMATMARTTANEGGPSYCNLDRLIDDIK 470 (476)
Q Consensus 433 ~~~~y~~~a~~~~~~~~~~~~~~g~~~~~~~~~i~~~~ 470 (476)
+..+++ +++..++.+.+.-+..+.++++++.+.
T Consensus 380 --~~~~~~---~~~~a~~~~~~~fs~~~~~~~~~~~~~ 412 (416)
T 2x6q_A 380 --PEVSKE---MGAKAKERVRKNFIITKHMERYLDILN 412 (416)
T ss_dssp --HHHHHH---HHHHHHHHHHHHTBHHHHHHHHHHHHH
T ss_pred --HHHHHH---HHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 333222 222222212223444555666655554
No 38
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.01 E-value=3.5e-07 Score=89.79 Aligned_cols=349 Identities=13% Similarity=0.094 Sum_probs=177.4
Q ss_pred CCEEEEEcCCCc-cCHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhcccccccccCCCCeeEEecCCC-CCCCCCCCCC
Q 011832 7 SPHILIFPLPCQ-SHMNSMLKLAEIFGLAGLKVTFLNSKHNHERLIRYTDIHDRFLQYSEFQFKTISDG-LPADHPRAGD 84 (476)
Q Consensus 7 ~~~il~~~~~~~-gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~-~~~~~~~~~~ 84 (476)
+.++....+|.. |.-.-...|++.|.++||+|++++...... .. ...+.+.+..++.. .+. ...
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~-~~---------~~~~~i~~~~~~~~~~~~--~~~-- 80 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFR-LN---------KVYPNIYFHEVTVNQYSV--FQY-- 80 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC--------------CCCTTEEEECCCCC------CCS--
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCc-cc---------ccCCceEEEecccccccc--ccc--
Confidence 456777777754 666778899999999999999999843211 10 01123555544311 110 000
Q ss_pred cHHHHHHHHHhhchHHHHHHHhcCCCCceEEEECCCcc--hHHHHHHHc---CCCeEEEecCchHHHHHHHhhhHHHhhC
Q 011832 85 QLMEMFDSLSLNTRPLLKQMLIDTSPPVSCIIGDACME--FVVDVATEL---EIPVIHFRAISACSFWAYFSIPEMIQAG 159 (476)
Q Consensus 85 ~~~~~~~~~~~~~~~~l~~ll~~~~~~~DlvI~D~~~~--~~~~vA~~l---~iP~i~~~~~~~~~~~~~~~~~~~~~~~ 159 (476)
.... +. ....+.++++.. +||+|++..... ....++..+ ++|+|........ .
T Consensus 81 ~~~~-~~-----~~~~l~~~l~~~--~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~---------~----- 138 (394)
T 2jjm_A 81 PPYD-LA-----LASKMAEVAQRE--NLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDI---------T----- 138 (394)
T ss_dssp CCHH-HH-----HHHHHHHHHHHH--TCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHH---------H-----
T ss_pred cccc-HH-----HHHHHHHHHHHc--CCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcc---------c-----
Confidence 0011 11 123355666666 889999875443 223344443 5998876442110 0
Q ss_pred CCCCCcCCccccccccccCCCCcccccCCCCCccccCCCCchHHHHHHHHhhcCCCCcEEEEcchhhcchHHHHHHHhhC
Q 011832 160 ELPMKAYDEDMDRLITKVPGMETFLRFRDLPSFCRVSDVTDRDLQVLKNATQQSPRAHALILNTFEDLEEPILSHIRTKC 239 (476)
Q Consensus 160 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~l~~~~~~~ 239 (476)
. . +... ......+. ....+|.+++.|....+.- ....
T Consensus 139 ~----------------~-~~~~---------------~~~~~~~~------~~~~ad~ii~~s~~~~~~~-----~~~~ 175 (394)
T 2jjm_A 139 V----------------L-GSDP---------------SLNNLIRF------GIEQSDVVTAVSHSLINET-----HELV 175 (394)
T ss_dssp T----------------T-TTCT---------------TTHHHHHH------HHHHSSEEEESCHHHHHHH-----HHHT
T ss_pred c----------------c-CCCH---------------HHHHHHHH------HHhhCCEEEECCHHHHHHH-----HHhh
Confidence 0 0 0000 00011111 1246788888887553332 3322
Q ss_pred ---CCeeeeCCCcccccccccccccccccccccCCccccchhhhhhhcCCCCCeEEEEEeccccccCHHHHHHHHHHHHh
Q 011832 240 ---PKVYTIGPLHLQLKTRFASNMISSSSQKSLNSLWEVDRSCIEWLGKQPVRSVLYVSFGSITLLKREQLIEFWHGLVD 316 (476)
Q Consensus 240 ---p~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~Gs~~~~~~~~~~~~~~a~~~ 316 (476)
.++..|..-.....-. + .....+.+.+.-. ++..+++..|.... ...+..++++++.
T Consensus 176 ~~~~~~~vi~ngv~~~~~~----------~-------~~~~~~~~~~~~~-~~~~~i~~~G~~~~--~Kg~~~li~a~~~ 235 (394)
T 2jjm_A 176 KPNKDIQTVYNFIDERVYF----------K-------RDMTQLKKEYGIS-ESEKILIHISNFRK--VKRVQDVVQAFAK 235 (394)
T ss_dssp CCSSCEEECCCCCCTTTCC----------C-------CCCHHHHHHTTCC----CEEEEECCCCG--GGTHHHHHHHHHH
T ss_pred CCcccEEEecCCccHHhcC----------C-------cchHHHHHHcCCC-CCCeEEEEeecccc--ccCHHHHHHHHHH
Confidence 2455554322111100 0 0112222223211 22356667787752 2334445555544
Q ss_pred c----CCceEEEECCCCCCCchhhHHHHHHh--hcCCceEeeccCh-HHHhhcccccccc----cccCchhHHHHHhhCC
Q 011832 317 S----KQRFLWVIRPDSVIGEGDALAELVEG--TKERGLLVSWVPQ-EEVLAHQAVAGFL----THSGWNSTLESIVAGV 385 (476)
Q Consensus 317 ~----~~~~i~~~~~~~~~~~~~~l~~~~~~--~~~nv~~~~~~pq-~~lL~~~~~~~~I----~HGG~~s~~eal~~Gv 385 (476)
+ +.++++. +.+. ....+..+.++ +++||.+.++..+ .+++..+++ +| .-|..+++.||+++|+
T Consensus 236 l~~~~~~~l~i~-G~g~---~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~ 309 (394)
T 2jjm_A 236 IVTEVDAKLLLV-GDGP---EFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGV 309 (394)
T ss_dssp HHHSSCCEEEEE-CCCT---THHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTC
T ss_pred HHhhCCCEEEEE-CCch---HHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCC
Confidence 3 3444443 3221 11233333332 3468888887654 579999998 77 5566779999999999
Q ss_pred ceeccCCcccchhhHHHHHhhhcceeecccccCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHH
Q 011832 386 PMICWPYFADQQINSRFVSEVWNLGLDMKDVCDRNVVEKMVNDLMVERKEEFMRAADRMATMARTTANEGGPSYCNLDRL 465 (476)
Q Consensus 386 P~l~iP~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~l~~~i~~~l~~~~~~y~~~a~~~~~~~~~~~~~~g~~~~~~~~~ 465 (476)
|+|+.+.. .....+ +..+.|..++ .-+.++++++|.+++++ +..++ ++++..++.+.+.-+..+.++++
T Consensus 310 PvI~~~~~----~~~e~v-~~~~~g~~~~-~~d~~~la~~i~~l~~~--~~~~~---~~~~~~~~~~~~~~s~~~~~~~~ 378 (394)
T 2jjm_A 310 PCIGTRVG----GIPEVI-QHGDTGYLCE-VGDTTGVADQAIQLLKD--EELHR---NMGERARESVYEQFRSEKIVSQY 378 (394)
T ss_dssp CEEEECCT----TSTTTC-CBTTTEEEEC-TTCHHHHHHHHHHHHHC--HHHHH---HHHHHHHHHHHHHSCHHHHHHHH
T ss_pred CEEEecCC----ChHHHh-hcCCceEEeC-CCCHHHHHHHHHHHHcC--HHHHH---HHHHHHHHHHHHhCCHHHHHHHH
Confidence 99998753 223334 4435677665 34889999999999985 33222 22222222121234555556666
Q ss_pred HHHHHh
Q 011832 466 IDDIKM 471 (476)
Q Consensus 466 i~~~~~ 471 (476)
++.+.+
T Consensus 379 ~~~~~~ 384 (394)
T 2jjm_A 379 ETIYYD 384 (394)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 655544
No 39
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.95 E-value=4.7e-08 Score=95.55 Aligned_cols=318 Identities=12% Similarity=0.090 Sum_probs=171.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchh-hhhhcccccccccCCCCeeEEecCC-CCCCCCCCCCC
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHE-RLIRYTDIHDRFLQYSEFQFKTISD-GLPADHPRAGD 84 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~l~~-~~~~~~~~~~~ 84 (476)
..|++++. |++-.+.-+.+|.++|.++ +++.++.+....+ .+.+... +++.+. -|+ .+..+ ..
T Consensus 9 ~~~~~~v~-GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~~--------~~~~i~-~~~~~l~~~----~~ 73 (385)
T 4hwg_A 9 MLKVMTIV-GTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVFF--------DDMGIR-KPDYFLEVA----AD 73 (385)
T ss_dssp CCEEEEEE-CSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHHH--------C-CCCC-CCSEECCCC----CC
T ss_pred hhheeEEE-EcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHHH--------hhCCCC-CCceecCCC----CC
Confidence 35677765 8889999999999999888 9988887754433 1211100 011110 011 11111 11
Q ss_pred cHHHHHHHHHhhchHHHHHHHhcCCCCceEEEE--CCCcchHHHHHHHcCCCeEEEecCchHHHHHHHhhhHHHhhCCCC
Q 011832 85 QLMEMFDSLSLNTRPLLKQMLIDTSPPVSCIIG--DACMEFVVDVATELEIPVIHFRAISACSFWAYFSIPEMIQAGELP 162 (476)
Q Consensus 85 ~~~~~~~~~~~~~~~~l~~ll~~~~~~~DlvI~--D~~~~~~~~vA~~l~iP~i~~~~~~~~~~~~~~~~~~~~~~~~~p 162 (476)
+..... ..+...+.+++++. +||+|++ |..+.++..+|.++|||++.+....
T Consensus 74 ~~~~~~----~~~~~~l~~~l~~~--kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eagl-------------------- 127 (385)
T 4hwg_A 74 NTAKSI----GLVIEKVDEVLEKE--KPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAGN-------------------- 127 (385)
T ss_dssp CSHHHH----HHHHHHHHHHHHHH--CCSEEEEESCSGGGGGHHHHHHTTCCEEEESCCC--------------------
T ss_pred CHHHHH----HHHHHHHHHHHHhc--CCcEEEEECCchHHHHHHHHHHhCCCEEEEeCCC--------------------
Confidence 222222 22244577888887 8999886 3344455788999999987763210
Q ss_pred CCcCCccccccccccCCCCcccccCCCCCccccCCCCchHHHHHHHHhhcCCCCcEEEEcchhhcchHHHHHHHhhCC--
Q 011832 163 MKAYDEDMDRLITKVPGMETFLRFRDLPSFCRVSDVTDRDLQVLKNATQQSPRAHALILNTFEDLEEPILSHIRTKCP-- 240 (476)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~l~~~~~~~p-- 240 (476)
.. ... .+ -+...+.... .-++.+++.+...-+.-. +.-.+
T Consensus 128 ------------------rs-~~~-~~---------pee~nR~~~~-----~~a~~~~~~te~~~~~l~----~~G~~~~ 169 (385)
T 4hwg_A 128 ------------------RC-FDQ-RV---------PEEINRKIID-----HISDVNITLTEHARRYLI----AEGLPAE 169 (385)
T ss_dssp ------------------CC-SCT-TS---------THHHHHHHHH-----HHCSEEEESSHHHHHHHH----HTTCCGG
T ss_pred ------------------cc-ccc-cC---------cHHHHHHHHH-----hhhceeecCCHHHHHHHH----HcCCCcC
Confidence 00 000 00 0111111111 225666666654322210 21222
Q ss_pred CeeeeCCCcccccccccccccccccccccCCccccchhhhhhhcCCCCCeEEEEEeccccccC-HHHHHHHHHHHHhc--
Q 011832 241 KVYTIGPLHLQLKTRFASNMISSSSQKSLNSLWEVDRSCIEWLGKQPVRSVLYVSFGSITLLK-REQLIEFWHGLVDS-- 317 (476)
Q Consensus 241 ~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~Gs~~~~~-~~~~~~~~~a~~~~-- 317 (476)
++..+|....+.-..... .. ...++.+.++-. +++.|+++.|...+.. .+.+..+++++..+
T Consensus 170 ~I~vtGnp~~D~~~~~~~-----~~---------~~~~~~~~lgl~-~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~ 234 (385)
T 4hwg_A 170 LTFKSGSHMPEVLDRFMP-----KI---------LKSDILDKLSLT-PKQYFLISSHREENVDVKNNLKELLNSLQMLIK 234 (385)
T ss_dssp GEEECCCSHHHHHHHHHH-----HH---------HHCCHHHHTTCC-TTSEEEEEECCC-----CHHHHHHHHHHHHHHH
T ss_pred cEEEECCchHHHHHHhhh-----hc---------chhHHHHHcCCC-cCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHh
Confidence 578888544321100000 00 012233334322 2458888877654322 24556677777553
Q ss_pred --CCceEEEECCCCCCCchhhHHHH-H-HhhcCCceEeeccC---hHHHhhcccccccccccCchhHHHHHhhCCceecc
Q 011832 318 --KQRFLWVIRPDSVIGEGDALAEL-V-EGTKERGLLVSWVP---QEEVLAHQAVAGFLTHSGWNSTLESIVAGVPMICW 390 (476)
Q Consensus 318 --~~~~i~~~~~~~~~~~~~~l~~~-~-~~~~~nv~~~~~~p---q~~lL~~~~~~~~I~HGG~~s~~eal~~GvP~l~i 390 (476)
+..+|+...+. ..+.+..+ . -...+|+.+.+.++ ...+++.+++ +|+-.|. .+.||..+|+|+|++
T Consensus 235 ~~~~~vv~p~~p~----~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~ 307 (385)
T 4hwg_A 235 EYNFLIIFSTHPR----TKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNI 307 (385)
T ss_dssp HHCCEEEEEECHH----HHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEEC
T ss_pred cCCeEEEEECChH----HHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEc
Confidence 45677765311 01111211 0 00135788766555 4568989998 9988775 468999999999999
Q ss_pred CCcccchhhHHHHHhhhcceeecccccCHHHHHHHHHHHHhH
Q 011832 391 PYFADQQINSRFVSEVWNLGLDMKDVCDRNVVEKMVNDLMVE 432 (476)
Q Consensus 391 P~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~l~~~i~~~l~~ 432 (476)
+-..+.+. .+ +. |.++.+. .+.+.|.+++.++|++
T Consensus 308 ~~~ter~e---~v-~~-G~~~lv~--~d~~~i~~ai~~ll~d 342 (385)
T 4hwg_A 308 REAHERPE---GM-DA-GTLIMSG--FKAERVLQAVKTITEE 342 (385)
T ss_dssp SSSCSCTH---HH-HH-TCCEECC--SSHHHHHHHHHHHHTT
T ss_pred CCCccchh---hh-hc-CceEEcC--CCHHHHHHHHHHHHhC
Confidence 87554222 24 54 8777664 4899999999999985
No 40
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.78 E-value=5.1e-06 Score=83.85 Aligned_cols=160 Identities=8% Similarity=-0.022 Sum_probs=94.8
Q ss_pred EEEEEeccccccCHHHHHHHHHHHHhc---CCceEEEECCCCCCCchhhHHHHHHhhcCCce-EeeccChH---HHhhcc
Q 011832 291 VLYVSFGSITLLKREQLIEFWHGLVDS---KQRFLWVIRPDSVIGEGDALAELVEGTKERGL-LVSWVPQE---EVLAHQ 363 (476)
Q Consensus 291 ~I~vs~Gs~~~~~~~~~~~~~~a~~~~---~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~-~~~~~pq~---~lL~~~ 363 (476)
.+++..|... +...+..+++++..+ +.+++++-.++. ...+.+..+....++++. +.++ +.. +++..+
T Consensus 292 ~~i~~vGrl~--~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~--~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~~~~~~a 366 (485)
T 1rzu_A 292 PLFCVISRLT--WQKGIDLMAEAVDEIVSLGGRLVVLGAGDV--ALEGALLAAASRHHGRVGVAIGY-NEPLSHLMQAGC 366 (485)
T ss_dssp CEEEEESCBS--TTTTHHHHHTTHHHHHHTTCEEEEEECBCH--HHHHHHHHHHHHTTTTEEEEESC-CHHHHHHHHHHC
T ss_pred eEEEEEccCc--cccCHHHHHHHHHHHHhcCceEEEEeCCch--HHHHHHHHHHHhCCCcEEEecCC-CHHHHHHHHhcC
Confidence 4777788875 233344455555443 556555543220 001233444455667887 6777 543 578899
Q ss_pred ccccccc----ccCchhHHHHHhhCCceeccCCcccchhhHHHHHhhh---------cceeecccccCHHHHHHHHHHHH
Q 011832 364 AVAGFLT----HSGWNSTLESIVAGVPMICWPYFADQQINSRFVSEVW---------NLGLDMKDVCDRNVVEKMVNDLM 430 (476)
Q Consensus 364 ~~~~~I~----HGG~~s~~eal~~GvP~l~iP~~~DQ~~na~~v~~~~---------G~G~~~~~~~~~~~l~~~i~~~l 430 (476)
++ +|. -|.-.++.||+++|+|+|+... ......+ +.- +.|..++ .-+.++|+++|.+++
T Consensus 367 dv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~G~l~~-~~d~~~la~~i~~ll 438 (485)
T 1rzu_A 367 DA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTV-IDANHAALASKAATGVQFS-PVTLDGLKQAIRRTV 438 (485)
T ss_dssp SE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCCBEEES-SCSHHHHHHHHHHHH
T ss_pred CE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhhee-cccccccccccCCcceEeC-CCCHHHHHHHHHHHH
Confidence 98 663 2445689999999999999765 2344444 542 4677765 458899999999999
Q ss_pred ---hHhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 011832 431 ---VERKEEFMRAADRMATMARTTANEGGPSYCNLDRLIDDIKM 471 (476)
Q Consensus 431 ---~~~~~~y~~~a~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~ 471 (476)
++ +..++ ++++..++ +.-+-.+.++++++.+.+
T Consensus 439 ~~~~~--~~~~~---~~~~~~~~---~~fs~~~~~~~~~~~y~~ 474 (485)
T 1rzu_A 439 RYYHD--PKLWT---QMQKLGMK---SDVSWEKSAGLYAALYSQ 474 (485)
T ss_dssp HHHTC--HHHHH---HHHHHHHT---CCCBHHHHHHHHHHHHHH
T ss_pred HHhCC--HHHHH---HHHHHHHH---HhCChHHHHHHHHHHHHH
Confidence 44 33332 23332221 345555556666655543
No 41
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.76 E-value=2.8e-07 Score=97.76 Aligned_cols=166 Identities=10% Similarity=0.090 Sum_probs=92.8
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHHhcC-----CceEEEECCCCC-CCc------hhhHHHHHHh--hcCCceEee---
Q 011832 290 SVLYVSFGSITLLKREQLIEFWHGLVDSK-----QRFLWVIRPDSV-IGE------GDALAELVEG--TKERGLLVS--- 352 (476)
Q Consensus 290 ~~I~vs~Gs~~~~~~~~~~~~~~a~~~~~-----~~~i~~~~~~~~-~~~------~~~l~~~~~~--~~~nv~~~~--- 352 (476)
..+++..|... +...+..+++|+..+. .+++++-++... ... ...+..+.++ +.++|.+.+
T Consensus 572 ~~vIl~vGRl~--~~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~~ 649 (816)
T 3s28_A 572 KPILFTMARLD--RVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQM 649 (816)
T ss_dssp SCEEEEECCCC--TTTTHHHHHHHHHHCHHHHHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCCC
T ss_pred CeEEEEEccCc--ccCCHHHHHHHHHHHHhhCCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCcc
Confidence 45677788875 3445566777776553 344444332210 000 0122222222 457888887
Q ss_pred -ccChHHHhh----cccccccccc----cCchhHHHHHhhCCceeccCCcccchhhHHHHHhhhcceeecccccCHHHHH
Q 011832 353 -WVPQEEVLA----HQAVAGFLTH----SGWNSTLESIVAGVPMICWPYFADQQINSRFVSEVWNLGLDMKDVCDRNVVE 423 (476)
Q Consensus 353 -~~pq~~lL~----~~~~~~~I~H----GG~~s~~eal~~GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~l~ 423 (476)
++|+.++.. .+++ ||.- |--.++.||+++|+|+|+. |-......+ +.-+.|..++ .-+.+.++
T Consensus 650 ~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV-~dg~~Gllv~-p~D~e~LA 721 (816)
T 3s28_A 650 DRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEII-VHGKSGFHID-PYHGDQAA 721 (816)
T ss_dssp CHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHC-CBTTTBEEEC-TTSHHHHH
T ss_pred ccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHH-ccCCcEEEeC-CCCHHHHH
Confidence 445555544 3566 6632 3446899999999999996 344455555 5545787776 35889999
Q ss_pred HHHHHHH----hHhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 011832 424 KMVNDLM----VERKEEFMRAADRMATMARTTANEGGPSYCNLDRLIDDIK 470 (476)
Q Consensus 424 ~~i~~~l----~~~~~~y~~~a~~~~~~~~~~~~~~g~~~~~~~~~i~~~~ 470 (476)
++|.+++ +| +..+ +++++..++.+.+.-+-...++++++-.+
T Consensus 722 ~aI~~lL~~Ll~d--~~~~---~~m~~~ar~~a~~~fSwe~~a~~ll~lY~ 767 (816)
T 3s28_A 722 DTLADFFTKCKED--PSHW---DEISKGGLQRIEEKYTWQIYSQRLLTLTG 767 (816)
T ss_dssp HHHHHHHHHHHHC--THHH---HHHHHHHHHHHHHSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccC--HHHH---HHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 9997776 43 2222 22333333323234555555666665444
No 42
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.68 E-value=7.9e-06 Score=80.55 Aligned_cols=166 Identities=10% Similarity=0.041 Sum_probs=94.7
Q ss_pred CeEEEEEeccccccCHHHHHHHHHHHHhc-----CCceEEEECCCCCCCc--hhhHHHHHHh--hcCC-------ceEee
Q 011832 289 RSVLYVSFGSITLLKREQLIEFWHGLVDS-----KQRFLWVIRPDSVIGE--GDALAELVEG--TKER-------GLLVS 352 (476)
Q Consensus 289 ~~~I~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~~~~~--~~~l~~~~~~--~~~n-------v~~~~ 352 (476)
+..+++..|... +...+..+++++..+ +.+++++-.++..... ...+..+... +.++ +.+.+
T Consensus 183 ~~~~il~vGr~~--~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g 260 (413)
T 3oy2_A 183 DDVLFLNMNRNT--ARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRT 260 (413)
T ss_dssp TSEEEECCSCSS--GGGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECS
T ss_pred CceEEEEcCCCc--hhcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceeeccC
Confidence 346778888864 233444455555443 3566666544322110 0222222222 4444 66779
Q ss_pred ccChH---HHhhccccccccc----ccCchhHHHHHhhCCceeccCCcccchhhHHHHHhhhcc----------------
Q 011832 353 WVPQE---EVLAHQAVAGFLT----HSGWNSTLESIVAGVPMICWPYFADQQINSRFVSEVWNL---------------- 409 (476)
Q Consensus 353 ~~pq~---~lL~~~~~~~~I~----HGG~~s~~eal~~GvP~l~iP~~~DQ~~na~~v~~~~G~---------------- 409 (476)
|+|+. +++..+++ +|. -|...++.||+++|+|+|+... ......+ +. |.
T Consensus 261 ~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----~g~~e~v-~~-~~~~~i~~~~~~~~~~~~ 332 (413)
T 3oy2_A 261 VLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAV----GGADDYF-SG-DCVYKIKPSAWISVDDRD 332 (413)
T ss_dssp CCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECC----HHHHHHS-CT-TTSEEECCCEEEECTTTC
T ss_pred cCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCC----CChHHHH-cc-Cccccccccccccccccc
Confidence 99955 47888888 653 2334589999999999999654 2333444 33 33
Q ss_pred ee--ecccccCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 011832 410 GL--DMKDVCDRNVVEKMVNDLMVERKEEFMRAADRMATMARTTANEGGPSYCNLDRLIDDIKM 471 (476)
Q Consensus 410 G~--~~~~~~~~~~l~~~i~~~l~~~~~~y~~~a~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~ 471 (476)
|. .+. .-+.++++++| +++++ +..+ +++++..++.+.+.-+-.+.++++++.+.+
T Consensus 333 G~~gl~~-~~d~~~la~~i-~l~~~--~~~~---~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~ 389 (413)
T 3oy2_A 333 GIGGIEG-IIDVDDLVEAF-TFFKD--EKNR---KEYGKRVQDFVKTKPTWDDISSDIIDFFNS 389 (413)
T ss_dssp SSCCEEE-ECCHHHHHHHH-HHTTS--HHHH---HHHHHHHHHHHTTSCCHHHHHHHHHHHHHH
T ss_pred CcceeeC-CCCHHHHHHHH-HHhcC--HHHH---HHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 44 443 24899999999 99996 4333 233333333233345556666666655554
No 43
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.66 E-value=1.6e-05 Score=80.15 Aligned_cols=163 Identities=8% Similarity=-0.025 Sum_probs=95.2
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHHhc---CCceEEEECCCCCCCchhhHHHHHHhhcCCce-EeeccCh--HHHhhcc
Q 011832 290 SVLYVSFGSITLLKREQLIEFWHGLVDS---KQRFLWVIRPDSVIGEGDALAELVEGTKERGL-LVSWVPQ--EEVLAHQ 363 (476)
Q Consensus 290 ~~I~vs~Gs~~~~~~~~~~~~~~a~~~~---~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~-~~~~~pq--~~lL~~~ 363 (476)
..+++..|... +...+..+++++..+ +.+++++-.++. .....+..+....++++. +.++... .+++..+
T Consensus 292 ~~~i~~vGrl~--~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~--~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~a 367 (485)
T 2qzs_A 292 VPLFAVVSRLT--SQKGLDLVLEALPGLLEQGGQLALLGAGDP--VLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGA 367 (485)
T ss_dssp SCEEEEEEEES--GGGCHHHHHHHHHHHHHTTCEEEEEEEECH--HHHHHHHHHHHHSTTTEEEEESCCHHHHHHHHHHC
T ss_pred CeEEEEeccCc--cccCHHHHHHHHHHHhhCCcEEEEEeCCch--HHHHHHHHHHHhCCCcEEEeCCCCHHHHHHHHHhC
Confidence 35666778765 233344455555443 556555543220 001233444445567886 6777333 2578899
Q ss_pred ccccccc----ccCchhHHHHHhhCCceeccCCcccchhhHHHHHhhh---------cceeecccccCHHHHHHHHHHHH
Q 011832 364 AVAGFLT----HSGWNSTLESIVAGVPMICWPYFADQQINSRFVSEVW---------NLGLDMKDVCDRNVVEKMVNDLM 430 (476)
Q Consensus 364 ~~~~~I~----HGG~~s~~eal~~GvP~l~iP~~~DQ~~na~~v~~~~---------G~G~~~~~~~~~~~l~~~i~~~l 430 (476)
++ +|. -|.-.++.||+++|+|+|+... ..+...+ +.- +.|..++ .-+.++|+++|.+++
T Consensus 368 dv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~G~l~~-~~d~~~la~~i~~ll 439 (485)
T 2qzs_A 368 DV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTV-SDCSLENLADGVASGFVFE-DSNAWSLLRAIRRAF 439 (485)
T ss_dssp SE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCCBEEEC-SSSHHHHHHHHHHHH
T ss_pred CE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCcccee-ccCccccccccccceEEEC-CCCHHHHHHHHHHHH
Confidence 98 662 2334588999999999999854 2344445 542 4677765 358899999999999
Q ss_pred ---hHhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhh
Q 011832 431 ---VERKEEFMRAADRMATMARTTANEGGPSYCNLDRLIDDIKMM 472 (476)
Q Consensus 431 ---~~~~~~y~~~a~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~ 472 (476)
++ +..++ ++++..+. +.-+-.+.++++++-+.+.
T Consensus 440 ~~~~~--~~~~~---~~~~~~~~---~~fs~~~~~~~~~~ly~~~ 476 (485)
T 2qzs_A 440 VLWSR--PSLWR---FVQRQAMA---MDFSWQVAAKSYRELYYRL 476 (485)
T ss_dssp HHHTS--HHHHH---HHHHHHHH---CCCCHHHHHHHHHHHHHHH
T ss_pred HHcCC--HHHHH---HHHHHHHh---hcCCHHHHHHHHHHHHHHh
Confidence 44 33332 23333222 3455556666666655443
No 44
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.63 E-value=2.2e-07 Score=80.37 Aligned_cols=141 Identities=11% Similarity=0.068 Sum_probs=93.1
Q ss_pred EEEEEeccccccCHHHHHHHHHHHHhcC-CceEEEECCCCCCCchhhH-HHHHHhhcCCceEeeccCh---HHHhhcccc
Q 011832 291 VLYVSFGSITLLKREQLIEFWHGLVDSK-QRFLWVIRPDSVIGEGDAL-AELVEGTKERGLLVSWVPQ---EEVLAHQAV 365 (476)
Q Consensus 291 ~I~vs~Gs~~~~~~~~~~~~~~a~~~~~-~~~i~~~~~~~~~~~~~~l-~~~~~~~~~nv~~~~~~pq---~~lL~~~~~ 365 (476)
.+++..|+.. ....+..+++++..++ .++++.-.+.... .-..+ .++...+++||.+.+|+|+ ..++..+++
T Consensus 24 ~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~l~i~G~~~~~~-~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adi 100 (177)
T 2f9f_A 24 DFWLSVNRIY--PEKRIELQLEVFKKLQDEKLYIVGWFSKGD-HAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKG 100 (177)
T ss_dssp SCEEEECCSS--GGGTHHHHHHHHHHCTTSCEEEEBCCCTTS-THHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCSE
T ss_pred CEEEEEeccc--cccCHHHHHHHHHhCCCcEEEEEecCccHH-HHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHhCCE
Confidence 4566778775 2445666788888774 4655554333211 11111 2222346789999999998 468889998
Q ss_pred ccccc---ccCc-hhHHHHHhhCCceeccCCcccchhhHHHHHhhhcceeecccccCHHHHHHHHHHHHhHhHHHH-HHH
Q 011832 366 AGFLT---HSGW-NSTLESIVAGVPMICWPYFADQQINSRFVSEVWNLGLDMKDVCDRNVVEKMVNDLMVERKEEF-MRA 440 (476)
Q Consensus 366 ~~~I~---HGG~-~s~~eal~~GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~l~~~i~~~l~~~~~~y-~~~ 440 (476)
+|. +.|+ .++.||+++|+|+|+... ..+...+ +..+.|..+ .-+.+++.++|.+++++ +.+ +++
T Consensus 101 --~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i-~~~~~g~~~--~~d~~~l~~~i~~l~~~--~~~~~~~ 169 (177)
T 2f9f_A 101 --LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETV-INEKTGYLV--NADVNEIIDAMKKVSKN--PDKFKKD 169 (177)
T ss_dssp --EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHC-CBTTTEEEE--CSCHHHHHHHHHHHHHC--TTTTHHH
T ss_pred --EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHh-cCCCccEEe--CCCHHHHHHHHHHHHhC--HHHHHHH
Confidence 665 3344 499999999999999754 4455556 554578777 46899999999999985 333 555
Q ss_pred HHHHH
Q 011832 441 ADRMA 445 (476)
Q Consensus 441 a~~~~ 445 (476)
+++.+
T Consensus 170 ~~~~a 174 (177)
T 2f9f_A 170 CFRRA 174 (177)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 54443
No 45
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.31 E-value=0.00026 Score=69.60 Aligned_cols=75 Identities=9% Similarity=0.008 Sum_probs=57.9
Q ss_pred hcCCceEeeccChHH---Hhhccccccccc---ccC-chhHHHHH-------hhCCceeccCCcccchhhHHHHHhhhcc
Q 011832 344 TKERGLLVSWVPQEE---VLAHQAVAGFLT---HSG-WNSTLESI-------VAGVPMICWPYFADQQINSRFVSEVWNL 409 (476)
Q Consensus 344 ~~~nv~~~~~~pq~~---lL~~~~~~~~I~---HGG-~~s~~eal-------~~GvP~l~iP~~~DQ~~na~~v~~~~G~ 409 (476)
+.+||.+.+++|+.+ ++..+++ +|. +.| -+++.||+ ++|+|+|+... + ..-..
T Consensus 263 l~~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v-~~~~~ 329 (406)
T 2hy7_A 263 YGDNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------V-VGPYK 329 (406)
T ss_dssp CCTTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------G-TCSCS
T ss_pred CCCCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------c-ccCcc
Confidence 568999999999754 7888888 553 334 45789999 99999999755 5 54356
Q ss_pred eee-cccccCHHHHHHHHHHHHhH
Q 011832 410 GLD-MKDVCDRNVVEKMVNDLMVE 432 (476)
Q Consensus 410 G~~-~~~~~~~~~l~~~i~~~l~~ 432 (476)
|.. ++ .-+.+.|+++|.+++++
T Consensus 330 G~l~v~-~~d~~~la~ai~~ll~~ 352 (406)
T 2hy7_A 330 SRFGYT-PGNADSVIAAITQALEA 352 (406)
T ss_dssp SEEEEC-TTCHHHHHHHHHHHHHC
T ss_pred eEEEeC-CCCHHHHHHHHHHHHhC
Confidence 776 54 35889999999999986
No 46
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.11 E-value=0.0012 Score=64.12 Aligned_cols=95 Identities=17% Similarity=0.250 Sum_probs=65.7
Q ss_pred CceEeeccCh-HHHhhccccccccc---c--cCchhHHHHHhhCCceeccCCcccchhhHHHHHhhhcceeecccccCHH
Q 011832 347 RGLLVSWVPQ-EEVLAHQAVAGFLT---H--SGWNSTLESIVAGVPMICWPYFADQQINSRFVSEVWNLGLDMKDVCDRN 420 (476)
Q Consensus 347 nv~~~~~~pq-~~lL~~~~~~~~I~---H--GG~~s~~eal~~GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~~~~~~~~ 420 (476)
++.+.++..+ ..+++.+++ ++. . +|..++.||+++|+|+|+-|..++.......+ .+.|.+.... +.+
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~-~~~G~l~~~~---d~~ 334 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFL-EKEGAGFEVK---NET 334 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHH-HHTTCEEECC---SHH
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHH-HHCCCEEEeC---CHH
Confidence 4555565443 568988887 543 2 23478999999999999877777766666655 3447776664 789
Q ss_pred HHHHHHHHHHhH-hHHHHHHHHHHHHHH
Q 011832 421 VVEKMVNDLMVE-RKEEFMRAADRMATM 447 (476)
Q Consensus 421 ~l~~~i~~~l~~-~~~~y~~~a~~~~~~ 447 (476)
+|+++|.++|+| ....+.+++++..+.
T Consensus 335 ~La~ai~~ll~d~~r~~mg~~ar~~~~~ 362 (374)
T 2xci_A 335 ELVTKLTELLSVKKEIKVEEKSREIKGC 362 (374)
T ss_dssp HHHHHHHHHHHSCCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHh
Confidence 999999999974 112456666665544
No 47
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.00 E-value=0.00032 Score=72.15 Aligned_cols=115 Identities=10% Similarity=0.044 Sum_probs=74.5
Q ss_pred CCceEeeccChH---HHhhcccccccc---cccCchhHHHHHhhCCceeccCCcccchhh-HHHHHhhhcceeecccccC
Q 011832 346 ERGLLVSWVPQE---EVLAHQAVAGFL---THSGWNSTLESIVAGVPMICWPYFADQQIN-SRFVSEVWNLGLDMKDVCD 418 (476)
Q Consensus 346 ~nv~~~~~~pq~---~lL~~~~~~~~I---~HGG~~s~~eal~~GvP~l~iP~~~DQ~~n-a~~v~~~~G~G~~~~~~~~ 418 (476)
++|.+.+++|+. +++..+++ || ..|+..++.||+++|+|+|++|-..=.... +..+ ...|+...+.. +
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l-~~~g~~e~v~~--~ 508 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLN-HHLGLDEMNVA--D 508 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHH-HHHTCGGGBCS--S
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHH-HHCCChhhhcC--C
Confidence 789999999854 57888888 65 126677999999999999998753211222 3344 55677766653 8
Q ss_pred HHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHH--hcCCChHHHHHHHHHHHH
Q 011832 419 RNVVEKMVNDLMVERKEEFMRAADRMATMARTTA--NEGGPSYCNLDRLIDDIK 470 (476)
Q Consensus 419 ~~~l~~~i~~~l~~~~~~y~~~a~~~~~~~~~~~--~~~g~~~~~~~~~i~~~~ 470 (476)
.+.+.+++.++++| +..++ ++++..++.+ .+.-+....++++.+.+.
T Consensus 509 ~~~la~~i~~l~~~--~~~~~---~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~ 557 (568)
T 2vsy_A 509 DAAFVAKAVALASD--PAALT---ALHARVDVLRRASGVFHMDGFADDFGALLQ 557 (568)
T ss_dssp HHHHHHHHHHHHHC--HHHHH---HHHHHHHHHHHHSSTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcC--HHHHH---HHHHHHHHhhhcCCCCCHHHHHHHHHHHHH
Confidence 99999999999986 44333 3333333322 234454555555554443
No 48
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.92 E-value=0.00016 Score=61.07 Aligned_cols=128 Identities=13% Similarity=0.152 Sum_probs=78.6
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHHhcCC--ce-EEEECCCCCCCchhhHHHHHHhhcCCceEeeccChH---HHhhcc
Q 011832 290 SVLYVSFGSITLLKREQLIEFWHGLVDSKQ--RF-LWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQE---EVLAHQ 363 (476)
Q Consensus 290 ~~I~vs~Gs~~~~~~~~~~~~~~a~~~~~~--~~-i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq~---~lL~~~ 363 (476)
+++++..|... +......+++++..+.. ++ ++.++.+. ....+..+......++.+ +|+|+. +++..+
T Consensus 2 ~~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~---~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~~~~a 75 (166)
T 3qhp_A 2 PFKIAMVGRYS--NEKNQSVLIKAVALSKYKQDIVLLLKGKGP---DEKKIKLLAQKLGVKAEF-GFVNSNELLEILKTC 75 (166)
T ss_dssp CEEEEEESCCS--TTTTHHHHHHHHHTCTTGGGEEEEEECCST---THHHHHHHHHHHTCEEEC-CCCCHHHHHHHHTTC
T ss_pred ceEEEEEeccc--hhcCHHHHHHHHHHhccCCCeEEEEEeCCc---cHHHHHHHHHHcCCeEEE-eecCHHHHHHHHHhC
Confidence 36778888875 34556667888877632 33 23333221 122334444445557888 999975 478888
Q ss_pred ccccccc----ccCchhHHHHHhhCC-ceeccCCcccchhhHHHHHhhhcceeecccccCHHHHHHHHHHHHhH
Q 011832 364 AVAGFLT----HSGWNSTLESIVAGV-PMICWPYFADQQINSRFVSEVWNLGLDMKDVCDRNVVEKMVNDLMVE 432 (476)
Q Consensus 364 ~~~~~I~----HGG~~s~~eal~~Gv-P~l~iP~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~l~~~i~~~l~~ 432 (476)
++ +|. -|...++.||+++|+ |+|+....+ .....+ +..+. .+ ..-+.+++.++|.+++++
T Consensus 76 dv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~---~~~~~~-~~~~~--~~-~~~~~~~l~~~i~~l~~~ 140 (166)
T 3qhp_A 76 TL--YVHAANVESEAIACLEAISVGIVPVIANSPLS---ATRQFA-LDERS--LF-EPNNAKDLSAKIDWWLEN 140 (166)
T ss_dssp SE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTC---GGGGGC-SSGGG--EE-CTTCHHHHHHHHHHHHHC
T ss_pred CE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCC---chhhhc-cCCce--EE-cCCCHHHHHHHHHHHHhC
Confidence 88 664 244569999999996 999943211 111222 33222 22 235899999999999985
No 49
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.88 E-value=0.00064 Score=71.79 Aligned_cols=122 Identities=18% Similarity=0.259 Sum_probs=85.3
Q ss_pred CCCeEEEEEeccccccCHHHHHHHHHHHHhcCCceEEEECCCCCCCchhhH-HHHHH-h-hcCCceEeeccChHHHh---
Q 011832 287 PVRSVLYVSFGSITLLKREQLIEFWHGLVDSKQRFLWVIRPDSVIGEGDAL-AELVE-G-TKERGLLVSWVPQEEVL--- 360 (476)
Q Consensus 287 ~~~~~I~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~l-~~~~~-~-~~~nv~~~~~~pq~~lL--- 360 (476)
+++.+||.||....+..++.+..-.+.|++.+.-++|....+... ...+ ..+.. . -++++.+....|..+-|
T Consensus 520 p~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~--~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~~~ 597 (723)
T 4gyw_A 520 PEDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVG--EPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRG 597 (723)
T ss_dssp CTTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGG--HHHHHHHHHHTTCCGGGEEEEECCCHHHHHHHG
T ss_pred CCCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHH--HHHHHHHHHhcCCCcCeEEECCCCCHHHHHHHh
Confidence 456799999999999999999999999999999889988755321 1122 22221 1 24678888888876544
Q ss_pred hccccccccc---ccCchhHHHHHhhCCceeccCCcccch--hhHHHHHhhhcceeecc
Q 011832 361 AHQAVAGFLT---HSGWNSTLESIVAGVPMICWPYFADQQ--INSRFVSEVWNLGLDMK 414 (476)
Q Consensus 361 ~~~~~~~~I~---HGG~~s~~eal~~GvP~l~iP~~~DQ~--~na~~v~~~~G~G~~~~ 414 (476)
...|+ ++- .+|.+|+.|||+.|||+|+++- +++ ..+.-+...+|+...+.
T Consensus 598 ~~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g--~~~~sR~~~s~l~~~gl~e~ia 652 (723)
T 4gyw_A 598 QLADV--CLDTPLCNGHTTGMDVLWAGTPMVTMPG--ETLASRVAASQLTCLGCLELIA 652 (723)
T ss_dssp GGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCC--SSGGGTHHHHHHHHHTCGGGBC
T ss_pred CCCeE--EeCCCCcCCHHHHHHHHHcCCCEEEccC--CCccHhHHHHHHHHcCCccccc
Confidence 45665 654 8999999999999999999994 332 12232325566655443
No 50
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.83 E-value=0.00028 Score=71.72 Aligned_cols=143 Identities=8% Similarity=-0.043 Sum_probs=93.2
Q ss_pred CeEEEEEeccccccCHHHHHHHHHHHHhcCCceEEEE--CCCCCCCchhhH-HHH-HHhhcCCceEeeccChHHH---hh
Q 011832 289 RSVLYVSFGSITLLKREQLIEFWHGLVDSKQRFLWVI--RPDSVIGEGDAL-AEL-VEGTKERGLLVSWVPQEEV---LA 361 (476)
Q Consensus 289 ~~~I~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~--~~~~~~~~~~~l-~~~-~~~~~~nv~~~~~~pq~~l---L~ 361 (476)
..++|.||+...+..++.+....+.+++.+..++|.. +... +....+ ..+ ...+.+++.+.+.+|..+. +.
T Consensus 440 G~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~--g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~ 517 (631)
T 3q3e_A 440 EVVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSN--GITHPYVERFIKSYLGDSATAHPHSPYHQYLRILH 517 (631)
T ss_dssp SEEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCC--GGGHHHHHHHHHHHHGGGEEEECCCCHHHHHHHHH
T ss_pred CeEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCc--hhhHHHHHHHHHcCCCccEEEcCCCCHHHHHHHHh
Confidence 3689999999989999999999999999888777743 3221 111122 211 1235578888899987664 47
Q ss_pred cccccccc---cccCchhHHHHHhhCCceeccCCcccchhhHHHHHhhhcceee-cccccCHHHHHHHHHHHHhHhHHHH
Q 011832 362 HQAVAGFL---THSGWNSTLESIVAGVPMICWPYFADQQINSRFVSEVWNLGLD-MKDVCDRNVVEKMVNDLMVERKEEF 437 (476)
Q Consensus 362 ~~~~~~~I---~HGG~~s~~eal~~GvP~l~iP~~~DQ~~na~~v~~~~G~G~~-~~~~~~~~~l~~~i~~~l~~~~~~y 437 (476)
.+|+ |+ ..+|..|+.||+++|||+|+++-..=--..+.-+...+|+... +. -+.++..+...++.+| +..
T Consensus 518 ~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~LIA--~d~eeYv~~Av~La~D--~~~ 591 (631)
T 3q3e_A 518 NCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWLIA--NTVDEYVERAVRLAEN--HQE 591 (631)
T ss_dssp TCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGGEE--SSHHHHHHHHHHHHHC--HHH
T ss_pred cCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCcceec--CCHHHHHHHHHHHhCC--HHH
Confidence 7777 44 3478899999999999999987432111122222144566542 32 3677777777777776 444
Q ss_pred HH
Q 011832 438 MR 439 (476)
Q Consensus 438 ~~ 439 (476)
++
T Consensus 592 l~ 593 (631)
T 3q3e_A 592 RL 593 (631)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 51
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.57 E-value=0.00021 Score=68.23 Aligned_cols=113 Identities=15% Similarity=0.148 Sum_probs=81.7
Q ss_pred hcCCceEeeccChHHH---hhcccccccccccCc---------hhHHHHHhhCCceeccCCcccchhhHHHHHhhhccee
Q 011832 344 TKERGLLVSWVPQEEV---LAHQAVAGFLTHSGW---------NSTLESIVAGVPMICWPYFADQQINSRFVSEVWNLGL 411 (476)
Q Consensus 344 ~~~nv~~~~~~pq~~l---L~~~~~~~~I~HGG~---------~s~~eal~~GvP~l~iP~~~DQ~~na~~v~~~~G~G~ 411 (476)
++ ||.+.+|+|+.++ |+.++..++..-+.. +-+.|++++|+|+|+.+ ...++..+ ++.|+|.
T Consensus 213 l~-nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v-~~~~~G~ 286 (339)
T 3rhz_A 213 PQ-NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELI-ENNGLGW 286 (339)
T ss_dssp CT-TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHH-HHHTCEE
T ss_pred cC-CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHH-HhCCeEE
Confidence 45 9999999999875 445566444433322 35789999999999754 45677777 7779999
Q ss_pred ecccccCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 011832 412 DMKDVCDRNVVEKMVNDLMVERKEEFMRAADRMATMARTTANEGGPSYCNLDRLIDDI 469 (476)
Q Consensus 412 ~~~~~~~~~~l~~~i~~~l~~~~~~y~~~a~~~~~~~~~~~~~~g~~~~~~~~~i~~~ 469 (476)
.++ +.+++.+++.++..++...+++||++.++.+++ +.-..+.+.+.+..+
T Consensus 287 ~~~---~~~e~~~~i~~l~~~~~~~m~~na~~~a~~~~~----~~f~k~~l~~~~~~~ 337 (339)
T 3rhz_A 287 IVK---DVEEAIMKVKNVNEDEYIELVKNVRSFNPILRK----GFFTRRLLTESVFQA 337 (339)
T ss_dssp EES---SHHHHHHHHHHCCHHHHHHHHHHHHHHTHHHHT----THHHHHHHHHHHHHH
T ss_pred EeC---CHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHHh
Confidence 987 578888888887666567889999999888765 444455555554443
No 52
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.47 E-value=0.0028 Score=55.11 Aligned_cols=128 Identities=11% Similarity=0.044 Sum_probs=77.5
Q ss_pred EEEEeccccccCHHHHHHHHHHHHhcC-------CceEEEECCCCCCCchhhHHHHHHhhcCCceE-eeccChH---HHh
Q 011832 292 LYVSFGSITLLKREQLIEFWHGLVDSK-------QRFLWVIRPDSVIGEGDALAELVEGTKERGLL-VSWVPQE---EVL 360 (476)
Q Consensus 292 I~vs~Gs~~~~~~~~~~~~~~a~~~~~-------~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~-~~~~pq~---~lL 360 (476)
+++..|+... +......+++++..+. .++++. +... ......+..+..+.+ +|.+ .+++++. .++
T Consensus 38 ~i~~~G~~~~-~~K~~~~li~a~~~l~~~~~~~~~~l~i~-G~~~-~~~~~~l~~~~~~~~-~v~~~~g~~~~~~~~~~~ 113 (200)
T 2bfw_A 38 TFMFIGRFDR-GQKGVDVLLKAIEILSSKKEFQEMRFIII-GKGD-PELEGWARSLEEKHG-NVKVITEMLSREFVRELY 113 (200)
T ss_dssp EEEEESCBCS-SSSCHHHHHHHHHHHTTSGGGGGEEEEEE-CCBC-HHHHHHHHHHHHHCT-TEEEECSCCCHHHHHHHH
T ss_pred EEEEeecccc-ccCCHHHHHHHHHHHHhhccCCCeEEEEE-CCCC-hHHHHHHHHHHHhcC-CEEEEeccCCHHHHHHHH
Confidence 6667787650 2233344555554432 233333 3221 001122333334444 8999 9999854 588
Q ss_pred hcccccccccc----cCchhHHHHHhhCCceeccCCcccchhhHHHHHhhhcceeecccccCHHHHHHHHHHHHh-H
Q 011832 361 AHQAVAGFLTH----SGWNSTLESIVAGVPMICWPYFADQQINSRFVSEVWNLGLDMKDVCDRNVVEKMVNDLMV-E 432 (476)
Q Consensus 361 ~~~~~~~~I~H----GG~~s~~eal~~GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~l~~~i~~~l~-~ 432 (476)
..+++ +|.- |...++.||+++|+|+|+.... .+...+ ..+.|..++ .-+.+.+.++|.++++ +
T Consensus 114 ~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~~--~~~~g~~~~-~~~~~~l~~~i~~l~~~~ 181 (200)
T 2bfw_A 114 GSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDII--TNETGILVK-AGDPGELANAILKALELS 181 (200)
T ss_dssp TTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESCH----HHHHHC--CTTTCEEEC-TTCHHHHHHHHHHHHHCC
T ss_pred HHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCCC----ChHHHc--CCCceEEec-CCCHHHHHHHHHHHHhcC
Confidence 88888 6632 2346899999999999987542 233333 235666665 3488999999999998 6
No 53
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.39 E-value=0.021 Score=54.63 Aligned_cols=106 Identities=9% Similarity=0.054 Sum_probs=69.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCcchhhhhhcccccccccCCCCe-eEEecCCCCCCCCCC
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGLA--GLKVTFLNSKHNHERLIRYTDIHDRFLQYSEF-QFKTISDGLPADHPR 81 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~l~~~~~~~~~~ 81 (476)
.+.+||+|+-..+.|++.-...+.+.|.++ +.+|++++.+.+..-++. .|.+ +++.++..
T Consensus 6 l~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~----------~p~vd~vi~~~~~------- 68 (349)
T 3tov_A 6 LDYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEY----------NPNIDELIVVDKK------- 68 (349)
T ss_dssp CTTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSS----------CTTCSEEEEECCS-------
T ss_pred CCCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhc----------CCCccEEEEeCcc-------
Confidence 456899999999999999999999999998 999999999765443322 2334 34444311
Q ss_pred CCCcHHHHHHHHHhhchHHHHHHHhcCCCCc-eEEEECCCcchHHHHHHHcCCCeEE
Q 011832 82 AGDQLMEMFDSLSLNTRPLLKQMLIDTSPPV-SCIIGDACMEFVVDVATELEIPVIH 137 (476)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~-DlvI~D~~~~~~~~vA~~l~iP~i~ 137 (476)
.....+.... .+...++.. +| |++|.=....-...++...|+|...
T Consensus 69 ---~~~~~~~~~~-----~l~~~Lr~~--~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 69 ---GRHNSISGLN-----EVAREINAK--GKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp ---SHHHHHHHHH-----HHHHHHHHH--CCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred ---cccccHHHHH-----HHHHHHhhC--CCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 0111111111 123334455 89 9999655555556678888988654
No 54
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.28 E-value=0.059 Score=51.17 Aligned_cols=95 Identities=11% Similarity=0.090 Sum_probs=60.3
Q ss_pred CCeEEEEEecc-c-c--ccCHHHHHHHHHHHHhcCCceEEEECCCCCCCchhhH-HHHHHhhc----CCce-EeeccC--
Q 011832 288 VRSVLYVSFGS-I-T--LLKREQLIEFWHGLVDSKQRFLWVIRPDSVIGEGDAL-AELVEGTK----ERGL-LVSWVP-- 355 (476)
Q Consensus 288 ~~~~I~vs~Gs-~-~--~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~l-~~~~~~~~----~nv~-~~~~~p-- 355 (476)
+++.|.+..|+ . . ..+.+.+.++++.+...+.++++. +++. ..++ ..+.+..+ .++. +.+..+
T Consensus 179 ~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~-g~~~----e~~~~~~i~~~~~~~~~~~~~~l~g~~sl~ 253 (348)
T 1psw_A 179 ERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLF-GSAK----DHEAGNEILAALNTEQQAWCRNLAGETQLD 253 (348)
T ss_dssp SSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEEC-CCGG----GHHHHHHHHTTSCHHHHTTEEECTTTSCHH
T ss_pred CCcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEE-eChh----hHHHHHHHHHhhhhccccceEeccCcCCHH
Confidence 45688899998 3 2 467778888888887767777664 3221 1122 33333222 2332 233222
Q ss_pred -hHHHhhcccccccccccCchhHHHHHhhCCceecc
Q 011832 356 -QEEVLAHQAVAGFLTHSGWNSTLESIVAGVPMICW 390 (476)
Q Consensus 356 -q~~lL~~~~~~~~I~HGG~~s~~eal~~GvP~l~i 390 (476)
-.++++++++ +|+.- .|+++-|.+.|+|+|++
T Consensus 254 e~~ali~~a~l--~I~~D-sg~~HlAaa~g~P~v~l 286 (348)
T 1psw_A 254 QAVILIAACKA--IVTND-SGLMHVAAALNRPLVAL 286 (348)
T ss_dssp HHHHHHHTSSE--EEEES-SHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHhCCE--EEecC-CHHHHHHHHcCCCEEEE
Confidence 2468989988 99862 45677799999999987
No 55
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=95.75 E-value=0.024 Score=55.52 Aligned_cols=85 Identities=9% Similarity=0.044 Sum_probs=58.0
Q ss_pred cCCceEeeccChHH---Hhhccccccccc--c-cCc-hhHHHHHhhCCceeccCCcccchhhHHHHHhhhcceeeccccc
Q 011832 345 KERGLLVSWVPQEE---VLAHQAVAGFLT--H-SGW-NSTLESIVAGVPMICWPYFADQQINSRFVSEVWNLGLDMKDVC 417 (476)
Q Consensus 345 ~~nv~~~~~~pq~~---lL~~~~~~~~I~--H-GG~-~s~~eal~~GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~~~~~ 417 (476)
.++|.+.+++|+.+ +++.+++ ||. . =|. .++.||+++|+|+|+ -..+ ....+ +.-..|..++ .-
T Consensus 294 ~~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v-~~~~~G~lv~-~~ 364 (413)
T 2x0d_A 294 GIHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLS-NWHSNIVSLE-QL 364 (413)
T ss_dssp TEEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGG-GTBTTEEEES-SC
T ss_pred cCcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhh-hcCCCEEEeC-CC
Confidence 46888999998764 7888898 664 2 133 467999999999998 3222 12334 5534677665 35
Q ss_pred CHHHHHHHHHHHHhHhHHHHHHH
Q 011832 418 DRNVVEKMVNDLMVERKEEFMRA 440 (476)
Q Consensus 418 ~~~~l~~~i~~~l~~~~~~y~~~ 440 (476)
+.+.|+++|.++++| +..+++
T Consensus 365 d~~~la~ai~~ll~~--~~~~~~ 385 (413)
T 2x0d_A 365 NPENIAETLVELCMS--FNNRDV 385 (413)
T ss_dssp SHHHHHHHHHHHHHH--TC----
T ss_pred CHHHHHHHHHHHHcC--HHHHHH
Confidence 889999999999996 444443
No 56
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=95.60 E-value=0.2 Score=50.70 Aligned_cols=165 Identities=12% Similarity=0.001 Sum_probs=92.4
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHHhc---CCceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccChH---HHhhcc
Q 011832 290 SVLYVSFGSITLLKREQLIEFWHGLVDS---KQRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQE---EVLAHQ 363 (476)
Q Consensus 290 ~~I~vs~Gs~~~~~~~~~~~~~~a~~~~---~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq~---~lL~~~ 363 (476)
.++++..|... +...+..+++|+..+ +.++++...++. .....+.......+.++.+....+.. .+++.+
T Consensus 327 ~p~i~~vgRl~--~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~a 402 (536)
T 3vue_A 327 IPLIAFIGRLE--EQKGPDVMAAAIPELMQEDVQIVLLGTGKK--KFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGA 402 (536)
T ss_dssp SCEEEEECCBS--GGGCHHHHHHHHHHHTTSSCEEEEECCBCH--HHHHHHHHHHHHSTTTEEEECSCCHHHHHHHHHHC
T ss_pred CcEEEEEeecc--ccCChHHHHHHHHHhHhhCCeEEEEeccCc--hHHHHHHHHHhhcCCceEEEEeccHHHHHHHHHhh
Confidence 35667778775 234455566666543 456655543321 00112234445678889888777764 478888
Q ss_pred cccccccc---cCc-hhHHHHHhhCCceeccCCcccchhhHHHHHhhhcceeecc---------cccCHHHHHHHHHHHH
Q 011832 364 AVAGFLTH---SGW-NSTLESIVAGVPMICWPYFADQQINSRFVSEVWNLGLDMK---------DVCDRNVVEKMVNDLM 430 (476)
Q Consensus 364 ~~~~~I~H---GG~-~s~~eal~~GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~~---------~~~~~~~l~~~i~~~l 430 (476)
++ ||.= =|+ .+++||+++|+|+|+-... .....| +.-.-|.... ...+.+.|+++|+++|
T Consensus 403 D~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~g----G~~e~V-~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral 475 (536)
T 3vue_A 403 DV--LAVPSRFEPCGLIQLQGMRYGTPCACASTG----GLVDTV-IEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAI 475 (536)
T ss_dssp SE--EEECCSCCSSCSHHHHHHHTTCCEEECSCT----HHHHHC-CBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHH
T ss_pred he--eecccccCCCCHHHHHHHHcCCCEEEcCCC----Cchhee-eCCCCccccccCCCceeEECCCCHHHHHHHHHHHH
Confidence 88 6642 233 4889999999999987543 233344 4322343221 1246789999999988
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 011832 431 VERKEEFMRAADRMATMARTTANEGGPSYCNLDRLIDDIKM 471 (476)
Q Consensus 431 ~~~~~~y~~~a~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~ 471 (476)
+. |.+. .++++.++++...-|=.+.+++.++-+.+
T Consensus 476 ~~----~~~~--~~~~~~~~am~~~fSW~~~A~~y~~ly~~ 510 (536)
T 3vue_A 476 KV----VGTP--AYEEMVRNCMNQDLSWKGPAKNWENVLLG 510 (536)
T ss_dssp HH----TTSH--HHHHHHHHHHHSCCSSHHHHHHHHHHHHT
T ss_pred Hh----cCcH--HHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 72 1111 12333344444444434445555444433
No 57
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=95.53 E-value=1.3 Score=41.25 Aligned_cols=131 Identities=15% Similarity=0.096 Sum_probs=73.9
Q ss_pred CCeEEEEEecccc---ccCHHHHHHHHHHHHhcCCceEEEECCCCCCCchhhH-HHHHHhhcCCceEeecc--Ch-HHHh
Q 011832 288 VRSVLYVSFGSIT---LLKREQLIEFWHGLVDSKQRFLWVIRPDSVIGEGDAL-AELVEGTKERGLLVSWV--PQ-EEVL 360 (476)
Q Consensus 288 ~~~~I~vs~Gs~~---~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~l-~~~~~~~~~nv~~~~~~--pq-~~lL 360 (476)
+++.|.+..|+.. ..+.+.+.++++.+.+.+.++++..+++. +.++ ..+.+..+ ++.+.+-. .+ .+++
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~----e~~~~~~i~~~~~-~~~l~g~~sl~el~ali 251 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPH----EEERAKRLAEGFA-YVEVLPKMSLEGVARVL 251 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHH----HHHHHHHHHTTCT-TEEECCCCCHHHHHHHH
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHH----HHHHHHHHHhhCC-cccccCCCCHHHHHHHH
Confidence 3457888888753 46677777888777665666655433220 1122 33333333 34333322 22 4689
Q ss_pred hcccccccccc-cCchhHHHHHhhCCceecc--CCcccc--hh--hHHHHHhhhcceeecccccCHHHHHHHHHHHHh
Q 011832 361 AHQAVAGFLTH-SGWNSTLESIVAGVPMICW--PYFADQ--QI--NSRFVSEVWNLGLDMKDVCDRNVVEKMVNDLMV 431 (476)
Q Consensus 361 ~~~~~~~~I~H-GG~~s~~eal~~GvP~l~i--P~~~DQ--~~--na~~v~~~~G~G~~~~~~~~~~~l~~~i~~~l~ 431 (476)
+++++ +|+. .|. ++=|.+.|+|+|++ |.-... +. +...+ . |-...+ ..++.+++.+++.++|+
T Consensus 252 ~~a~l--~I~~DSG~--~HlAaa~g~P~v~lfg~t~p~~~~P~~~~~~~~-~--~~~~cm-~~I~~~~V~~~i~~~l~ 321 (326)
T 2gt1_A 252 AGAKF--VVSVDTGL--SHLTAALDRPNITVYGPTDPGLIGGYGKNQMVC-R--APGNEL-SQLTANAVKQFIEENAE 321 (326)
T ss_dssp HTCSE--EEEESSHH--HHHHHHTTCCEEEEESSSCHHHHCCCSSSEEEE-E--CGGGCG-GGCCHHHHHHHHHHTTT
T ss_pred HhCCE--EEecCCcH--HHHHHHcCCCEEEEECCCChhhcCCCCCCceEe-c--CCcccc-cCCCHHHHHHHHHHHHH
Confidence 89888 9988 554 44466799999998 321111 00 00000 0 000001 26899999999999887
No 58
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=91.48 E-value=1.1 Score=39.92 Aligned_cols=113 Identities=14% Similarity=0.127 Sum_probs=63.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhcccccccccCCCCeeEEecCCCCCCCCCCCCCcHH
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHERLIRYTDIHDRFLQYSEFQFKTISDGLPADHPRAGDQLM 87 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~ 87 (476)
||||+.-=-+. |---...|++.|.+.| +|+++.+..++...-.... ...-+++.....+.. +....++.
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~sit------~~~pl~~~~~~~~~~---~~v~GTPa 70 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSLT------FTEPLKMRKIDTDFY---TVIDGTPA 70 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSCC------CSSCEEEEEEETTEE---EETTCCHH
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCccCCcccee------cCCCeEEEEecCCCe---EEECCCHH
Confidence 78887763332 3345788999999988 9999999776544322221 111245544432110 11111221
Q ss_pred HHHHHHHhhchHHHHHHHhcCCCCceEEEE----------CCCcc---hHHHHHHHcCCCeEEEec
Q 011832 88 EMFDSLSLNTRPLLKQMLIDTSPPVSCIIG----------DACME---FVVDVATELEIPVIHFRA 140 (476)
Q Consensus 88 ~~~~~~~~~~~~~l~~ll~~~~~~~DlvI~----------D~~~~---~~~~vA~~l~iP~i~~~~ 140 (476)
.-. .-.+..++... +||+||+ |.++. .|+.-|..+|||.|.||.
T Consensus 71 DCV-------~lal~~l~~~~--~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 127 (251)
T 2phj_A 71 DCV-------HLGYRVILEEK--KPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp HHH-------HHHHHTTTTTC--CCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHH-------HHHHHHhcCCC--CCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEc
Confidence 111 22234444323 7899997 33444 333446778999999976
No 59
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=91.40 E-value=0.71 Score=41.34 Aligned_cols=115 Identities=10% Similarity=0.049 Sum_probs=61.5
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhcccccccccCCCCeeEEecCCCCCCCCCCCCC
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHERLIRYTDIHDRFLQYSEFQFKTISDGLPADHPRAGD 84 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~ 84 (476)
+++||||+.-=-+. |---...|++.|.+ +|+|+++.+..++...-.... ...-+.+....++ -+....
T Consensus 9 ~~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg~g~siT------l~~pl~~~~~~~~----~~~v~G 76 (261)
T 3ty2_A 9 TPKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSGASNSLT------LNAPLHIKNLENG----MISVEG 76 (261)
T ss_dssp --CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTTCTTCCC------CSSCEEEEECTTS----CEEESS
T ss_pred CCCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcCccccee------cCCCeEEEEecCC----eEEECC
Confidence 44699988763333 33447788888876 899999999776544322221 1112455443211 111112
Q ss_pred cHHHHHHHHHhhchHHHHHHHhcCCCCceEEEEC----------CCcchHHHH---HHHcCCCeEEEecC
Q 011832 85 QLMEMFDSLSLNTRPLLKQMLIDTSPPVSCIIGD----------ACMEFVVDV---ATELEIPVIHFRAI 141 (476)
Q Consensus 85 ~~~~~~~~~~~~~~~~l~~ll~~~~~~~DlvI~D----------~~~~~~~~v---A~~l~iP~i~~~~~ 141 (476)
++..-. .-.+..++ . .+||+||+- .++...+.. |..+|||.|.||..
T Consensus 77 TPaDCV-------~lal~~l~-~--~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~ 136 (261)
T 3ty2_A 77 TPTDCV-------HLAITGVL-P--EMPDMVVAGINAGPNLGDDVWYSGTVAAAMEGRFLGLPALAVSLG 136 (261)
T ss_dssp CHHHHH-------HHHTTTTS-S--SCCSEEEEEEEESCCCGGGGGTCHHHHHC-CCSTTSCCEEEEEEC
T ss_pred CHHHHH-------HHHHHHhc-C--CCCCEEEECCcCCCCCCCCcCCchHHHHHHHHHHcCCCeEEEEcC
Confidence 222111 11122233 2 379999973 333333333 45579999999864
No 60
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=91.15 E-value=4.3 Score=40.22 Aligned_cols=109 Identities=15% Similarity=0.122 Sum_probs=66.9
Q ss_pred ce-EeeccChHH---Hhhccccccccc---ccCch-hHHHHHhhCC-----ceeccCCcccchhhHHHHHhhhcceeecc
Q 011832 348 GL-LVSWVPQEE---VLAHQAVAGFLT---HSGWN-STLESIVAGV-----PMICWPYFADQQINSRFVSEVWNLGLDMK 414 (476)
Q Consensus 348 v~-~~~~~pq~~---lL~~~~~~~~I~---HGG~~-s~~eal~~Gv-----P~l~iP~~~DQ~~na~~v~~~~G~G~~~~ 414 (476)
+. +.+++|+.+ ++..+++ |+. .=|+| ++.||+++|+ |+|+--+.+- +..+ .-|+.++
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~----~~~l----~~g~lv~ 402 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGA----ANEL----TSALIVN 402 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGG----GGTC----TTSEEEC
T ss_pred EEEeCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCC----HHHh----CCeEEEC
Confidence 44 457888765 6778888 654 33555 8999999998 6665433221 1111 2344454
Q ss_pred cccCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhh
Q 011832 415 DVCDRNVVEKMVNDLMVERKEEFMRAADRMATMARTTANEGGPSYCNLDRLIDDIKMM 472 (476)
Q Consensus 415 ~~~~~~~l~~~i~~~l~~~~~~y~~~a~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~ 472 (476)
.-+.+.++++|.++|++....-++..++..+..+ + -+..+.++++++.+.+.
T Consensus 403 -p~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~----~-~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 403 -PYDRDEVAAALDRALTMSLAERISRHAEMLDVIV----K-NDINHWQECFISDLKQI 454 (482)
T ss_dssp -TTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHH----H-TCHHHHHHHHHHHHHHS
T ss_pred -CCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH----h-CCHHHHHHHHHHHHHhc
Confidence 3578999999999998311122233333333332 2 36678888888888765
No 61
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=90.85 E-value=5.4 Score=39.55 Aligned_cols=110 Identities=14% Similarity=0.056 Sum_probs=68.5
Q ss_pred CceEeeccChHH---Hhhccccccccc---ccCch-hHHHHHhhC---CceeccCCcccchhhHHHHHhhhc-ceeeccc
Q 011832 347 RGLLVSWVPQEE---VLAHQAVAGFLT---HSGWN-STLESIVAG---VPMICWPYFADQQINSRFVSEVWN-LGLDMKD 415 (476)
Q Consensus 347 nv~~~~~~pq~~---lL~~~~~~~~I~---HGG~~-s~~eal~~G---vP~l~iP~~~DQ~~na~~v~~~~G-~G~~~~~ 415 (476)
.|.+...+|+.+ ++..+++ |+. .=|+| +..|++++| .|+|+--+.+ .+ +.+| -|+.+.
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~----~~l~~~allVn- 421 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AA----EVLGEYCRSVN- 421 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----TH----HHHGGGSEEEC-
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CH----HHhCCCEEEEC-
Confidence 577778888754 6777887 543 45888 568999996 5555543322 11 2223 356665
Q ss_pred ccCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhh
Q 011832 416 VCDRNVVEKMVNDLMVERKEEFMRAADRMATMARTTANEGGPSYCNLDRLIDDIKMM 472 (476)
Q Consensus 416 ~~~~~~l~~~i~~~l~~~~~~y~~~a~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~ 472 (476)
-.+.+.++++|.++|+...+.-+++.+++.+..+ ..+...-++.|++.|...
T Consensus 422 P~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~V~-----~~d~~~W~~~fl~~L~~~ 473 (496)
T 3t5t_A 422 PFDLVEQAEAISAALAAGPRQRAEAAARRRDAAR-----PWTLEAWVQAQLDGLAAD 473 (496)
T ss_dssp TTBHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHT-----TCBHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-----HCCHHHHHHHHHHHHhhc
Confidence 3589999999999998411223333333333332 245677788888888754
No 62
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=90.64 E-value=0.15 Score=51.71 Aligned_cols=42 Identities=7% Similarity=0.097 Sum_probs=29.9
Q ss_pred CCCCCEEEEEcCC------CccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 011832 4 KPKSPHILIFPLP------CQSHMNSMLKLAEIFGLAGLKVTFLNSKH 45 (476)
Q Consensus 4 ~~~~~~il~~~~~------~~gH~~p~l~La~~L~~rGH~Vt~~~~~~ 45 (476)
..++|||++++.- +.|=-.-.-+|.++|+++||+|++++|.+
T Consensus 6 ~~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~Y 53 (536)
T 3vue_A 6 HHHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRY 53 (536)
T ss_dssp --CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECC
T ss_pred CCCCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecCc
Confidence 3578999999732 11211346689999999999999999743
No 63
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=88.03 E-value=0.35 Score=47.19 Aligned_cols=41 Identities=17% Similarity=0.190 Sum_probs=31.8
Q ss_pred CCCCEEEEEcCCCc-----cCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 011832 5 PKSPHILIFPLPCQ-----SHMNSMLKLAEIFGLAGLKVTFLNSKH 45 (476)
Q Consensus 5 ~~~~~il~~~~~~~-----gH~~p~l~La~~L~~rGH~Vt~~~~~~ 45 (476)
..+|||+++..... |=......+|+.|+++||+|++++...
T Consensus 44 ~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp CCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CCCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 56799998883311 333568899999999999999999853
No 64
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=85.97 E-value=2 Score=39.96 Aligned_cols=111 Identities=9% Similarity=-0.068 Sum_probs=55.6
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhccccccc---ccCCCCeeEEecCCCCCCCC
Q 011832 3 EKPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHERLIRYTDIHDR---FLQYSEFQFKTISDGLPADH 79 (476)
Q Consensus 3 ~~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~---~~~~~~i~~~~l~~~~~~~~ 79 (476)
.|+++|||+|+..+.. .....+.|.++||+|..+.+.+....-......... ....-++.+.. +
T Consensus 3 ~m~~~mrivf~Gt~~f-----a~~~L~~L~~~~~~v~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIpv~~-----~--- 69 (318)
T 3q0i_A 3 AMSQSLRIVFAGTPDF-----AARHLAALLSSEHEIIAVYTQPERPAGRGKKLTASPVKTLALEHNVPVYQ-----P--- 69 (318)
T ss_dssp ----CCEEEEECCSHH-----HHHHHHHHHTSSSEEEEEECCCC---------CCCHHHHHHHHTTCCEEC-----C---
T ss_pred ccccCCEEEEEecCHH-----HHHHHHHHHHCCCcEEEEEcCCCCcccccccCCCCHHHHHHHHcCCCEEc-----c---
Confidence 4667999999987643 345568888999998877664432110000000000 00000122111 0
Q ss_pred CCCCCcHHHHHHHHHhhchHHHHHHHhcCCCCceEEEECCCcc-hHHHHHHHcCCCeEEEecCc
Q 011832 80 PRAGDQLMEMFDSLSLNTRPLLKQMLIDTSPPVSCIIGDACME-FVVDVATELEIPVIHFRAIS 142 (476)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~DlvI~D~~~~-~~~~vA~~l~iP~i~~~~~~ 142 (476)
.... .+.+.+.+++. +||++|+=.+.. -...+-......++-++++.
T Consensus 70 -~~~~-------------~~~~~~~l~~~--~~Dliv~~~y~~ilp~~~l~~~~~g~iNiHpSl 117 (318)
T 3q0i_A 70 -ENFK-------------SDESKQQLAAL--NADLMVVVAYGLLLPKVVLDTPKLGCINVHGSI 117 (318)
T ss_dssp -SCSC-------------SHHHHHHHHTT--CCSEEEESSCCSCCCHHHHTSSTTCEEEEESSS
T ss_pred -CcCC-------------CHHHHHHHHhc--CCCEEEEeCccccCCHHHHhhCcCCEEEeCCcc
Confidence 0011 12455667776 889999876654 33445555555678887753
No 65
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=84.74 E-value=5 Score=35.65 Aligned_cols=115 Identities=12% Similarity=0.065 Sum_probs=60.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhcccccccccCCCCeeEEecCCCCCCCCCCCCCcHH
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHERLIRYTDIHDRFLQYSEFQFKTISDGLPADHPRAGDQLM 87 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~ 87 (476)
||||+.-=-+. |---...|++.|.+.| +|+++.|..++...-..... ...+++.....+-....+....++.
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~siTl------~~pl~~~~~~~~~~~~~~~v~GTPa 72 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSEEH-EVFVVAPDKERSATGHSITI------HVPLWMKKVFISERVVAYSTTGTPA 72 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCCCC------SSCCCEEECCCSSSEEEEEESSCHH
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccC------CCCeEEEEeccCCCCceEEECCcHH
Confidence 57766652222 2233788999999888 89999997765443322221 1124554443210000011111221
Q ss_pred HHHHHHHhhchHHHHHHHhcCCCCceEEEEC----------CCcc---hHHHHHHHcCCCeEEEec
Q 011832 88 EMFDSLSLNTRPLLKQMLIDTSPPVSCIIGD----------ACME---FVVDVATELEIPVIHFRA 140 (476)
Q Consensus 88 ~~~~~~~~~~~~~l~~ll~~~~~~~DlvI~D----------~~~~---~~~~vA~~l~iP~i~~~~ 140 (476)
.-. .-.+..++ . .+||+||+- .++. .++.-|..+|||.|.+|.
T Consensus 73 DCV-------~lal~~l~-~--~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 128 (247)
T 1j9j_A 73 DCV-------KLAYNVVM-D--KRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISS 128 (247)
T ss_dssp HHH-------HHHHHTTS-T--TCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHH-------HHHHHhhc-c--CCCCEEEECCccCCCCCcCeecchhHHHHHHHHhcCCCeEEEec
Confidence 111 12233333 2 389999973 3333 344456779999999976
No 66
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=84.02 E-value=6.5 Score=35.64 Aligned_cols=114 Identities=10% Similarity=-0.021 Sum_probs=61.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhcccccccccCCCCeeEEecCCCCCCCCCCCCCcHH
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHERLIRYTDIHDRFLQYSEFQFKTISDGLPADHPRAGDQLM 87 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~ 87 (476)
||||+.-=-+. +---...|++.|.+.| +|+++.|..++...-..... ...+++...+.+ ....+....++.
T Consensus 1 M~ILlTNDDGi-~ApGi~aL~~aL~~~g-~V~VVAP~~~qSg~g~siTl------~~pl~~~~~~~~-~~~~~~v~GTPa 71 (280)
T 1l5x_A 1 MKILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSATGLGITL------HKPLRMYEVDLC-GFRAIATSGTPS 71 (280)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTTSCSSCCC------SSCBCEEEEECS-SSEEEEESSCHH
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccC------CCCeEEEEeccC-CCceEEECCcHH
Confidence 57766652222 2233788999999988 99999997765443322211 112444444321 000111112222
Q ss_pred HHHHHHHhhchHHHHHHHhcCCCCceEEEEC-----------CCcc---hHHHHHHHcCCCeEEEecC
Q 011832 88 EMFDSLSLNTRPLLKQMLIDTSPPVSCIIGD-----------ACME---FVVDVATELEIPVIHFRAI 141 (476)
Q Consensus 88 ~~~~~~~~~~~~~l~~ll~~~~~~~DlvI~D-----------~~~~---~~~~vA~~l~iP~i~~~~~ 141 (476)
.-. .-.+..+ . .+||+||+- .++. .|+.-|..+|||.|.+|..
T Consensus 72 DCV-------~lal~~l--~--~~PDLVvSGIN~G~Nlg~d~v~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (280)
T 1l5x_A 72 DTV-------YLATFGL--G--RKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSAY 128 (280)
T ss_dssp HHH-------HHHHHHH--T--SCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEEC
T ss_pred HHH-------HHHHhcC--C--CCCCEEEECCccCCcCCccccccchhHHHHHHHHHcCCCeEEEEcc
Confidence 111 2223444 3 389999973 3333 3344466799999999874
No 67
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=83.77 E-value=7.5 Score=34.67 Aligned_cols=112 Identities=13% Similarity=0.108 Sum_probs=60.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhcccccccccCCCCeeEEecCCCCCCCCCCCC-Cc
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHERLIRYTDIHDRFLQYSEFQFKTISDGLPADHPRAG-DQ 85 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~-~~ 85 (476)
.||||+.-=-+. |---...|++.|.+.| +|+++.|..++...-..... ...++...... ..+... .+
T Consensus 1 ~M~ILlTNDDGi-~apGi~aL~~~L~~~g-~V~VVAP~~~~Sg~g~aiTl------~~Pl~~~~~~~----~~~~v~~GT 68 (254)
T 2v4n_A 1 SMRILLSNDDGV-HAPGIQTLAKALREFA-DVQVVAPDRNRSGASNSLTL------ESSLRTFTFDN----GDIAVQMGT 68 (254)
T ss_dssp CCEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCCCC------SSCCEEEECTT----SCEEEETCC
T ss_pred CCeEEEEcCCCC-CCHHHHHHHHHHHhCC-cEEEEeeCCCCcCccCCcCC------CCCeEEEEeCC----CCeEECCCC
Confidence 478877653332 3344788999998876 99999997765443332221 11244444311 011111 22
Q ss_pred HHHHHHHHHhhchHHHHHHHhcCCCCceEEEEC----------CCcchHHHH---HHHcCCCeEEEec
Q 011832 86 LMEMFDSLSLNTRPLLKQMLIDTSPPVSCIIGD----------ACMEFVVDV---ATELEIPVIHFRA 140 (476)
Q Consensus 86 ~~~~~~~~~~~~~~~l~~ll~~~~~~~DlvI~D----------~~~~~~~~v---A~~l~iP~i~~~~ 140 (476)
+..-. .-.+..++ . .+||+||+- .++...+.. |..+|||.|.+|.
T Consensus 69 PaDCV-------~lal~~ll-~--~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 126 (254)
T 2v4n_A 69 PTDCV-------YLGVNALM-R--PRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSL 126 (254)
T ss_dssp HHHHH-------HHHHHTTS-S--SCCSEEEEEEEESCCCGGGGGGCHHHHHHHTTTTSSSCEEEEEE
T ss_pred HHHHH-------HHHHhhcc-C--CCCCEeeeCCcCCCCCCCCeeccHHHHHHHHHHhcCCCeEEEec
Confidence 22111 12233344 2 389999973 344433333 4558999999976
No 68
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=83.51 E-value=1.7 Score=34.88 Aligned_cols=43 Identities=12% Similarity=0.139 Sum_probs=32.1
Q ss_pred CCCCCEEEEEc-CCC-ccCHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 011832 4 KPKSPHILIFP-LPC-QSHMNSMLKLAEIFGLAGLKVTFLNSKHN 46 (476)
Q Consensus 4 ~~~~~~il~~~-~~~-~gH~~p~l~La~~L~~rGH~Vt~~~~~~~ 46 (476)
+.+-||++++- .|. ...+.-.+-++..|.++||+|++.+.+.-
T Consensus 3 ~~~~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAA 47 (157)
T 1kjn_A 3 TESTGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAA 47 (157)
T ss_dssp ---CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHH
T ss_pred cccceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHH
Confidence 45678887665 443 36677799999999999999999999654
No 69
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=82.36 E-value=1.7 Score=38.82 Aligned_cols=112 Identities=13% Similarity=0.101 Sum_probs=59.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhcccccccccCCCCeeEEecCCCCCCCCCCCCCcHHH
Q 011832 9 HILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHERLIRYTDIHDRFLQYSEFQFKTISDGLPADHPRAGDQLME 88 (476)
Q Consensus 9 ~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~ 88 (476)
|||+.-=-+. +---+..|+++|.+.| +|+++.+..++...-... .....+++........ .....++..
T Consensus 3 ~ILlTNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~g~si------T~~~pl~~~~~~~~~~---~~v~GTPaD 71 (251)
T 2wqk_A 3 TFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSL------TFTEPLKMRKIDTDFY---TVIDGTPAD 71 (251)
T ss_dssp EEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSC------CCSSCEEEEEEETTEE---EETTCCHHH
T ss_pred EEEEEcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeCCCCcccccCc------CCCCCceeEEeeccce---eecCCChHH
Confidence 5665542221 2233778999999998 599999876644332221 1112244444321100 001111111
Q ss_pred HHHHHHhhchHHHHHHHhcCCCCceEEEE----------CCCcc---hHHHHHHHcCCCeEEEec
Q 011832 89 MFDSLSLNTRPLLKQMLIDTSPPVSCIIG----------DACME---FVVDVATELEIPVIHFRA 140 (476)
Q Consensus 89 ~~~~~~~~~~~~l~~ll~~~~~~~DlvI~----------D~~~~---~~~~vA~~l~iP~i~~~~ 140 (476)
- ..-.+..++.+. +||+||+ |.++. .|+.-|..+|||.|.+|.
T Consensus 72 C-------V~lal~~~l~~~--~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~ 127 (251)
T 2wqk_A 72 C-------VHLGYRVILEEK--KPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp H-------HHHHHHTTTTTC--CCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred H-------HhhhhhhhcCCC--CCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEc
Confidence 1 122234445454 8899998 44444 344456778999999975
No 70
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=82.20 E-value=9.1 Score=34.12 Aligned_cols=121 Identities=12% Similarity=0.080 Sum_probs=68.8
Q ss_pred CCCEEEEEcCC--CccCHHHHHHHHHHHHhCCCEEEEEeC---Cc-----chhhhhhcccccccccCCCCeeEEecCCCC
Q 011832 6 KSPHILIFPLP--CQSHMNSMLKLAEIFGLAGLKVTFLNS---KH-----NHERLIRYTDIHDRFLQYSEFQFKTISDGL 75 (476)
Q Consensus 6 ~~~~il~~~~~--~~gH~~p~l~La~~L~~rGH~Vt~~~~---~~-----~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~ 75 (476)
++||.+|++.. ..|-..-...|++.|.++|++|.++=+ .. ....+.+..+. .+......+..
T Consensus 24 ~~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fKPv~~g~~~~~~D~~~~~~~~g~------~~~~~~~~~~~-- 95 (251)
T 3fgn_A 24 SHMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCKPVQTGTARGDDDLAEVGRLAGV------TQLAGLARYPQ-- 95 (251)
T ss_dssp SSCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEEEEECCGGGTCCHHHHHHHHHCC------CEEEEEEECSS--
T ss_pred cCCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEeeeecCCCCCCHHHHHHHHHcCC------CCCCCCeeECC--
Confidence 56777766633 448889999999999999999999752 11 01111111110 00011111111
Q ss_pred CCCCCCCCCcHHHHHHHHH---hhchHHHHHHHhcCCCCceEEEECCCc----------chHHHHHHHcCCCeEEEecCc
Q 011832 76 PADHPRAGDQLMEMFDSLS---LNTRPLLKQMLIDTSPPVSCIIGDACM----------EFVVDVATELEIPVIHFRAIS 142 (476)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~---~~~~~~l~~ll~~~~~~~DlvI~D~~~----------~~~~~vA~~l~iP~i~~~~~~ 142 (476)
...+.. ..... ....+.+.+.++....++|+||+|... ....++|+.++.|++.+....
T Consensus 96 -------p~sP~~-aa~~~~~~~~~~~~i~~~~~~l~~~~D~vlIEGagGl~~pl~~~~~~~adla~~l~~pVILV~~~~ 167 (251)
T 3fgn_A 96 -------PMAPAA-AAEHAGMALPARDQIVRLIADLDRPGRLTLVEGAGGLLVELAEPGVTLRDVAVDVAAAALVVVTAD 167 (251)
T ss_dssp -------SSCHHH-HHHHTTCCCCCHHHHHHHHHTTCCTTCEEEEECSSSTTCEEETTTEEHHHHHHHTTCEEEEEECSS
T ss_pred -------CCChHH-HHHHcCCCCCCHHHHHHHHHHHHhcCCEEEEECCCCCcCCcCcccchHHHHHHHcCCCEEEEEcCC
Confidence 111111 11111 112345666666555689999998742 245689999999999987654
No 71
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=80.37 E-value=21 Score=30.35 Aligned_cols=39 Identities=13% Similarity=0.035 Sum_probs=34.5
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
++-.|.+++..+.|-..-.+.+|-..+.+|++|.|+..-
T Consensus 27 ~~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~ 65 (196)
T 1g5t_A 27 ERGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFI 65 (196)
T ss_dssp CCCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEee
Confidence 455788888889999999999999999999999999653
No 72
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=80.16 E-value=15 Score=32.52 Aligned_cols=113 Identities=13% Similarity=0.013 Sum_probs=60.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhcccccccccCCCCeeEEecCCCCCC---CCCCCCC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHERLIRYTDIHDRFLQYSEFQFKTISDGLPA---DHPRAGD 84 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~---~~~~~~~ 84 (476)
||||+.-=-+. |---...|++.|.+.| +|+++.|..++...-... .....+++...+.+.+. ..+....
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~si------Tl~~pl~~~~~~~~~~~~~~~~~~v~G 72 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAASQFG-EVFVAAPDTEQSAAGHAI------TIAHPVRAYPHPSPLHAPHFPAYRVRG 72 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEECSSCCCCCSSC------CCSSCBEEEECCCCTTSCCCCEEEEES
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccc------cCCCCeEEEEeccCcCCCCCceEEEcC
Confidence 57766652222 2233788999999888 899999976644332222 11223566665432110 0111112
Q ss_pred cHHHHHHHHHhhchHHHHHHHhcCCCCceEEEEC----------CCcc---hHHHHHHHcCCCeEEEec
Q 011832 85 QLMEMFDSLSLNTRPLLKQMLIDTSPPVSCIIGD----------ACME---FVVDVATELEIPVIHFRA 140 (476)
Q Consensus 85 ~~~~~~~~~~~~~~~~l~~ll~~~~~~~DlvI~D----------~~~~---~~~~vA~~l~iP~i~~~~ 140 (476)
++..-. .-.+. + . .+||+||+- .++. .++.-|..+|||.|.+|.
T Consensus 73 TPaDCV-------~lal~--l-~--~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 129 (244)
T 2e6c_A 73 TPADCV-------ALGLH--L-F--GPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSV 129 (244)
T ss_dssp CHHHHH-------HHHHH--H-S--CSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEE
T ss_pred cHHHHH-------HHHHc--C-C--CCCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEEec
Confidence 222111 11122 2 2 489999973 3333 344456779999999976
No 73
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=78.47 E-value=11 Score=34.20 Aligned_cols=33 Identities=18% Similarity=0.307 Sum_probs=25.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
|||+|. |+.|-+- ..|++.|.++||+|+.++-.
T Consensus 1 MkILVT--GatGfIG--~~L~~~L~~~G~~V~~l~R~ 33 (298)
T 4b4o_A 1 MRVLVG--GGTGFIG--TALTQLLNARGHEVTLVSRK 33 (298)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEECC
Confidence 788766 5556554 46899999999999999753
No 74
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=78.04 E-value=3.1 Score=33.30 Aligned_cols=48 Identities=19% Similarity=0.195 Sum_probs=39.7
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhc
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHERLIRY 53 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~ 53 (476)
++.||++.+.++-.|-....=++..|..+|++|..++.....+.+.+.
T Consensus 2 ~~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~e~~v~~ 49 (137)
T 1ccw_A 2 EKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQELFIKA 49 (137)
T ss_dssp CCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECHHHHHHH
T ss_pred CCCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH
Confidence 357899999999999999999999999999999988875555554433
No 75
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=77.93 E-value=3.5 Score=35.63 Aligned_cols=42 Identities=19% Similarity=0.103 Sum_probs=35.2
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 011832 4 KPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHN 46 (476)
Q Consensus 4 ~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~ 46 (476)
|.+++||++.-.|+.|-+. ...|.+.|.++|++|.++.++.-
T Consensus 1 m~~~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A 42 (209)
T 3zqu_A 1 MSGPERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAA 42 (209)
T ss_dssp CCSCSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHH
T ss_pred CCCCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccH
Confidence 4455789988888888777 89999999999999999999543
No 76
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=77.82 E-value=12 Score=31.72 Aligned_cols=39 Identities=8% Similarity=0.267 Sum_probs=31.7
Q ss_pred CEEEEEc--CCCccCHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 011832 8 PHILIFP--LPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHN 46 (476)
Q Consensus 8 ~~il~~~--~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~ 46 (476)
||++.+. -|+.|--.-...||..|+++|++|.++-.++.
T Consensus 1 M~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~~ 41 (206)
T 4dzz_A 1 MKVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDPQ 41 (206)
T ss_dssp CEEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCCC
Confidence 4565554 45678899999999999999999999988654
No 77
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=76.22 E-value=16 Score=33.95 Aligned_cols=104 Identities=10% Similarity=-0.044 Sum_probs=57.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcch-------hhhhhcccccccccCCCCeeEEecCCCCCC
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNH-------ERLIRYTDIHDRFLQYSEFQFKTISDGLPA 77 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~-------~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~ 77 (476)
+.+|||+|+. --+....+.+.|.++||+|..+.+.+.. ....... ++.+.... .+
T Consensus 20 ~~~mrIvf~G-----~~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~~~~~v~~~A~~~----------gIpv~~~~-~~-- 81 (329)
T 2bw0_A 20 FQSMKIAVIG-----QSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKADPLGLEAEKD----------GVPVFKYS-RW-- 81 (329)
T ss_dssp -CCCEEEEEC-----CHHHHHHHHHHHHHTTCEEEEEEECCCCSSCCCHHHHHHHHH----------TCCEEECS-CC--
T ss_pred CCCCEEEEEc-----CcHHHHHHHHHHHHCCCeEEEEEeCCCcCCCCCHHHHHHHHc----------CCCEEecC-cc--
Confidence 4569999993 1233445778999999998766552221 1111111 13333221 00
Q ss_pred CCCCCCCcHHHHHHHHHhhchHHHHHHHhcCCCCceEEEECCCcc-hHHHHHHHcCCCeEEEecCc
Q 011832 78 DHPRAGDQLMEMFDSLSLNTRPLLKQMLIDTSPPVSCIIGDACME-FVVDVATELEIPVIHFRAIS 142 (476)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~DlvI~D~~~~-~~~~vA~~l~iP~i~~~~~~ 142 (476)
.. .....+.+.+.+++. ++|++|+=.+.. ....+-......++-+.++.
T Consensus 82 ---~~-----------~~~~~~~~~~~l~~~--~~Dliv~a~y~~ilp~~il~~~~~g~iNiHpSL 131 (329)
T 2bw0_A 82 ---RA-----------KGQALPDVVAKYQAL--GAELNVLPFCSQFIPMEIISAPRHGSIIYHPSL 131 (329)
T ss_dssp ---EE-----------TTEECHHHHHHHHTT--CCSEEEESSCSSCCCHHHHTCSTTCEEEEESSC
T ss_pred ---cc-----------cccccHHHHHHHHhc--CCCEEEEeehhhhCCHHHHhhCcCCEEEEcCCc
Confidence 00 011124455667776 889999877754 44455566667788887764
No 78
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=75.86 E-value=15 Score=34.01 Aligned_cols=42 Identities=10% Similarity=-0.006 Sum_probs=28.8
Q ss_pred HHHHHHHhcCCCCceEEEECCCcc-hHHHHHHHcCCCeEEEecCc
Q 011832 99 PLLKQMLIDTSPPVSCIIGDACME-FVVDVATELEIPVIHFRAIS 142 (476)
Q Consensus 99 ~~l~~ll~~~~~~~DlvI~D~~~~-~~~~vA~~l~iP~i~~~~~~ 142 (476)
+.+.+.+++. +||++|+=.+.. ....+-......++-++++.
T Consensus 71 ~~~~~~l~~~--~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpSL 113 (314)
T 1fmt_A 71 QENQQLVAEL--QADVMVVVAYGLILPKAVLEMPRLGCINVHGSL 113 (314)
T ss_dssp HHHHHHHHHT--TCSEEEEESCCSCCCHHHHHSSTTCEEEEESSS
T ss_pred HHHHHHHHhc--CCCEEEEeeccccCCHHHHhhccCCEEEEcCCc
Confidence 3455667776 889999876644 44555566677788887764
No 79
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=75.71 E-value=17 Score=37.40 Aligned_cols=73 Identities=16% Similarity=0.201 Sum_probs=44.3
Q ss_pred eeccCh---------HHHhhccccccccc---ccCch-hHHHHHhhCCceeccCCcccchhhHHHHHhh-------hcce
Q 011832 351 VSWVPQ---------EEVLAHQAVAGFLT---HSGWN-STLESIVAGVPMICWPYFADQQINSRFVSEV-------WNLG 410 (476)
Q Consensus 351 ~~~~pq---------~~lL~~~~~~~~I~---HGG~~-s~~eal~~GvP~l~iP~~~DQ~~na~~v~~~-------~G~G 410 (476)
-.|++. .++++.+++ ||. +=|+| +.+||+++|+|+|+.-..+ ....| .. -+.|
T Consensus 498 P~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG----~~d~V-~dg~~~~~~~~tG 570 (725)
T 3nb0_A 498 PEFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVSG----FGSYM-EDLIETNQAKDYG 570 (725)
T ss_dssp CSCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTBH----HHHHH-HTTSCHHHHHHTT
T ss_pred ccccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCCC----hhhhh-hccccccCCCCce
Confidence 377766 458989998 553 23444 8999999999999875533 11222 11 1356
Q ss_pred eecc-c-ccCHHHHHHHHHHHH
Q 011832 411 LDMK-D-VCDRNVVEKMVNDLM 430 (476)
Q Consensus 411 ~~~~-~-~~~~~~l~~~i~~~l 430 (476)
+.+. . ..+.+++.++|.++|
T Consensus 571 ~lV~~rd~~d~ee~aeaLa~aL 592 (725)
T 3nb0_A 571 IYIVDRRFKAPDESVEQLVDYM 592 (725)
T ss_dssp EEEECCSSSCHHHHHHHHHHHH
T ss_pred EEEeCCCCCCHHHHHHHHHHHH
Confidence 6553 2 345555555555554
No 80
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=75.04 E-value=15 Score=38.39 Aligned_cols=114 Identities=12% Similarity=0.119 Sum_probs=78.0
Q ss_pred eeccChHHHhhcccccccccccCchhHHHHHhhCCceeccCCcccchhhHHHHHhhhcceeec----c-c-ccCHHHHHH
Q 011832 351 VSWVPQEEVLAHQAVAGFLTHSGWNSTLESIVAGVPMICWPYFADQQINSRFVSEVWNLGLDM----K-D-VCDRNVVEK 424 (476)
Q Consensus 351 ~~~~pq~~lL~~~~~~~~I~HGG~~s~~eal~~GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~----~-~-~~~~~~l~~ 424 (476)
.++.+-.++|..+|+ +||=- .+.+.|.+..++|++....-.|++.+- ..|.=..+ . . .-+.++|.+
T Consensus 604 ~~~~di~~ll~~aD~--lITDy-SSv~fD~~~l~kPiif~~~D~~~Y~~~-----~rg~y~d~~~~~pg~~~~~~~eL~~ 675 (729)
T 3l7i_A 604 SNYNDVSELFLISDC--LITDY-SSVMFDYGILKRPQFFFAYDIDKYDKG-----LRGFYMNYMEDLPGPIYTEPYGLAK 675 (729)
T ss_dssp TTCSCHHHHHHTCSE--EEESS-CTHHHHHGGGCCCEEEECTTTTTTTSS-----CCSBSSCTTSSSSSCEESSHHHHHH
T ss_pred CCCcCHHHHHHHhCE--EEeec-hHHHHhHHhhCCCEEEecCCHHHHhhc-----cCCcccChhHhCCCCeECCHHHHHH
Confidence 456677889999998 88874 467899999999999987766665331 12332222 1 1 358899999
Q ss_pred HHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhhcc
Q 011832 425 MVNDLMVERKEEFMRAADRMATMARTTANEGGPSYCNLDRLIDDIKMMSS 474 (476)
Q Consensus 425 ~i~~~l~~~~~~y~~~a~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~ 474 (476)
+|.+.... ...|+++.+++.+.+-. ..+|.++.+.++.+++....-.+
T Consensus 676 ~i~~~~~~-~~~~~~~~~~~~~~~~~-~~dg~as~ri~~~i~~~~~~~~~ 723 (729)
T 3l7i_A 676 ELKNLDKV-QQQYQEKIDAFYDRFCS-VDNGKASQYIGDLIHKDIKEQLE 723 (729)
T ss_dssp HHTTHHHH-HHHTHHHHHHHHHHHST-TCCSCHHHHHHHHHHHHHHHHCC
T ss_pred HHhhhhcc-chhHHHHHHHHHHHhCC-ccCChHHHHHHHHHHhcCcCccc
Confidence 99988762 14788888777777654 34677777777777766654433
No 81
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=74.16 E-value=15 Score=32.72 Aligned_cols=32 Identities=31% Similarity=0.303 Sum_probs=24.9
Q ss_pred CCceEEE-ECCCcc-hHHHHHHHcCCCeEEEecC
Q 011832 110 PPVSCII-GDACME-FVVDVATELEIPVIHFRAI 141 (476)
Q Consensus 110 ~~~DlvI-~D~~~~-~~~~vA~~l~iP~i~~~~~ 141 (476)
..||+|| +|.... -++.=|.++|||+|.+.-+
T Consensus 157 ~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDT 190 (256)
T 2vqe_B 157 RLPDAIFVVDPTKEAIAVREARKLFIPVIALADT 190 (256)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCT
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEecC
Confidence 4789877 666555 6677899999999998654
No 82
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=73.58 E-value=14 Score=32.60 Aligned_cols=37 Identities=19% Similarity=0.247 Sum_probs=29.1
Q ss_pred CCCEEEEEcCC--CccCHHHHHHHHHHHHhCCCEEEEEe
Q 011832 6 KSPHILIFPLP--CQSHMNSMLKLAEIFGLAGLKVTFLN 42 (476)
Q Consensus 6 ~~~~il~~~~~--~~gH~~p~l~La~~L~~rGH~Vt~~~ 42 (476)
+.+|.+|++.. ..|-..-...|++.|.++|.+|.++=
T Consensus 19 ~m~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fK 57 (242)
T 3qxc_A 19 FQGHMLFISATNTNAGKTTCARLLAQYCNACGVKTILLK 57 (242)
T ss_dssp CCCEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred hcCcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEe
Confidence 34566666533 44888999999999999999999974
No 83
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=71.83 E-value=27 Score=33.54 Aligned_cols=97 Identities=14% Similarity=0.220 Sum_probs=51.5
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhcccccccccCCCCe-eEEecCCCCCCCCCCC
Q 011832 4 KPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHERLIRYTDIHDRFLQYSEF-QFKTISDGLPADHPRA 82 (476)
Q Consensus 4 ~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~l~~~~~~~~~~~ 82 (476)
+++..||++++.+.. + . .+.++..+.|++|+++.+...... . ..... .+..++ .
T Consensus 2 ~~~~k~l~Il~~~~~-~-~---~i~~aa~~lG~~vv~v~~~~~~~~--~---------~~~~~d~~~~~~---------~ 56 (425)
T 3vot_A 2 TKRNKNLAIICQNKH-L-P---FIFEEAERLGLKVTFFYNSAEDFP--G---------NLPAVERCVPLP---------L 56 (425)
T ss_dssp CCCCCEEEEECCCTT-C-C---HHHHHHHHTTCEEEEEEETTSCCC--C---------SCTTEEEEEEEC---------T
T ss_pred CCCCcEEEEECCChh-H-H---HHHHHHHHCCCEEEEEECCCcccc--c---------CHhhccEEEecC---------C
Confidence 345568888874432 2 2 356777788999999876433110 0 00011 222222 0
Q ss_pred CCcHHHHHHHHHhhchHHHHHHHhcCCCCceEEEE--CCCcchHHHHHHHcCCCe
Q 011832 83 GDQLMEMFDSLSLNTRPLLKQMLIDTSPPVSCIIG--DACMEFVVDVATELEIPV 135 (476)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~DlvI~--D~~~~~~~~vA~~l~iP~ 135 (476)
..+...+. ..+.++..+. ++|.|++ |.....+..+++.+|+|.
T Consensus 57 ~~d~~~~~--------~~~~~~~~~~--~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 57 FEDEEAAM--------DVVRQTFVEF--PFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp TTCHHHHH--------HHHHHHHHHS--CCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred CCCHHHHH--------HHHHHhhhhc--CCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 11222222 2234455555 8899885 333335567889999994
No 84
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=71.75 E-value=12 Score=33.70 Aligned_cols=41 Identities=15% Similarity=0.243 Sum_probs=33.1
Q ss_pred CCCCEEEEEc--CCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 011832 5 PKSPHILIFP--LPCQSHMNSMLKLAEIFGLAGLKVTFLNSKH 45 (476)
Q Consensus 5 ~~~~~il~~~--~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~ 45 (476)
.+++|+++++ -++.|--.-...||..|+++|.+|.++-.+.
T Consensus 79 ~~~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~ 121 (271)
T 3bfv_A 79 DSAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDM 121 (271)
T ss_dssp TCCCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred CCCCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 3456776665 3577888999999999999999999997753
No 85
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=71.32 E-value=4.3 Score=33.48 Aligned_cols=49 Identities=14% Similarity=0.210 Sum_probs=40.8
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhc
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHERLIRY 53 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~ 53 (476)
.++.||++.+.++-.|-....-++..|..+|++|..+......+.+.+.
T Consensus 16 ~~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p~e~lv~a 64 (161)
T 2yxb_A 16 RRRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQTPEQVAMA 64 (161)
T ss_dssp CCSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCCHHHHHHH
T ss_pred CCCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH
Confidence 3578999999999999999999999999999999998875554554433
No 86
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=70.79 E-value=20 Score=34.14 Aligned_cols=37 Identities=14% Similarity=0.002 Sum_probs=28.0
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 3 EKPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 3 ~~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
.|++.+||+++..+.. .+.+++++.+.|++|.++..+
T Consensus 3 ~m~~~~~ilI~g~g~~-----~~~~~~a~~~~G~~~v~v~~~ 39 (403)
T 4dim_A 3 AMYDNKRLLILGAGRG-----QLGLYKAAKELGIHTIAGTMP 39 (403)
T ss_dssp ---CCCEEEEECCCGG-----GHHHHHHHHHHTCEEEEEECS
T ss_pred cccCCCEEEEECCcHh-----HHHHHHHHHHCCCEEEEEcCC
Confidence 4667889999987754 366899999999999999763
No 87
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=70.39 E-value=15 Score=34.34 Aligned_cols=40 Identities=13% Similarity=0.021 Sum_probs=33.9
Q ss_pred CCEEEEEc-CCCccCHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 011832 7 SPHILIFP-LPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHN 46 (476)
Q Consensus 7 ~~~il~~~-~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~ 46 (476)
.++|+|++ -|+.|-..-..++|..|+++|++|.++..++.
T Consensus 15 ~~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~~ 55 (334)
T 3iqw_A 15 SLRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPA 55 (334)
T ss_dssp TCCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCSS
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 46777666 56779999999999999999999999999754
No 88
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=69.19 E-value=3.7 Score=33.31 Aligned_cols=34 Identities=15% Similarity=0.242 Sum_probs=27.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
++.||+++.. |++- ..+++.|.++||+|+++...
T Consensus 2 ~~~~vlI~G~---G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGH---SILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCSCEEEECC---SHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCCcEEEECC---CHHH--HHHHHHHHHCCCCEEEEECC
Confidence 4568988853 5444 78899999999999999873
No 89
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=69.03 E-value=5.1 Score=32.55 Aligned_cols=39 Identities=26% Similarity=0.379 Sum_probs=27.3
Q ss_pred CCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 1 MEEKPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 1 ~~~~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
|.+-...++|+++.. |.+- ..+++.|.++|++|+++...
T Consensus 13 ~~~~~~~~~v~IiG~---G~iG--~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 13 MSKKQKSKYIVIFGC---GRLG--SLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp ----CCCCEEEEECC---SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred hhcccCCCcEEEECC---CHHH--HHHHHHHHhCCCeEEEEECC
Confidence 445566789999964 4333 56889999999999999863
No 90
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=68.48 E-value=4.3 Score=34.67 Aligned_cols=44 Identities=14% Similarity=-0.030 Sum_probs=35.1
Q ss_pred CCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 011832 1 MEEKPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKH 45 (476)
Q Consensus 1 ~~~~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~ 45 (476)
|..|.+++||++.-.|+.+=+. ...+.+.|.++|++|.++.++.
T Consensus 2 ~~~~l~~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~ 45 (194)
T 1p3y_1 2 SISILKDKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKT 45 (194)
T ss_dssp -CTTGGGCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHH
T ss_pred cccccCCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchh
Confidence 3445567799888888877665 7899999999999999999853
No 91
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=68.20 E-value=58 Score=28.35 Aligned_cols=107 Identities=8% Similarity=-0.033 Sum_probs=61.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCcchhh---hhhcccccccccCCCCeeEEecCCCCCCCC
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGLA--GLKVTFLNSKHNHER---LIRYTDIHDRFLQYSEFQFKTISDGLPADH 79 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~r--GH~Vt~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~ 79 (476)
.++|||+|+..++.+ -+.++.+.|.+. +++|..+.+...... ..+.. ++.+..++. ..
T Consensus 20 ~~~~rI~~l~SG~g~---~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~----------gIp~~~~~~----~~ 82 (229)
T 3auf_A 20 GHMIRIGVLISGSGT---NLQAILDGCREGRIPGRVAVVISDRADAYGLERARRA----------GVDALHMDP----AA 82 (229)
T ss_dssp TTCEEEEEEESSCCH---HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHT----------TCEEEECCG----GG
T ss_pred CCCcEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHc----------CCCEEEECc----cc
Confidence 345799999766643 366777888877 688766554322111 11111 255444321 00
Q ss_pred CCCCCcHHHHHHHHHhhchHHHHHHHhcCCCCceEEEECCCcc-hHHHHHHHcCCCeEEEecC
Q 011832 80 PRAGDQLMEMFDSLSLNTRPLLKQMLIDTSPPVSCIIGDACME-FVVDVATELEIPVIHFRAI 141 (476)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~DlvI~D~~~~-~~~~vA~~l~iP~i~~~~~ 141 (476)
.. + . ....+.+.+.+++. +||+||+=.+.. ....+-..+...++-+.++
T Consensus 83 ~~---~-r-------~~~~~~~~~~l~~~--~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpS 132 (229)
T 3auf_A 83 YP---S-R-------TAFDAALAERLQAY--GVDLVCLAGYMRLVRGPMLTAFPNRILNIHPS 132 (229)
T ss_dssp SS---S-H-------HHHHHHHHHHHHHT--TCSEEEESSCCSCCCHHHHHHSTTCEEEEESS
T ss_pred cc---c-h-------hhccHHHHHHHHhc--CCCEEEEcChhHhCCHHHHhhccCCEEEEccC
Confidence 00 0 1 11234466777776 889999887754 4556667777778887664
No 92
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=67.46 E-value=16 Score=33.45 Aligned_cols=40 Identities=20% Similarity=0.288 Sum_probs=32.3
Q ss_pred CCCEEEEEc--CCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 011832 6 KSPHILIFP--LPCQSHMNSMLKLAEIFGLAGLKVTFLNSKH 45 (476)
Q Consensus 6 ~~~~il~~~--~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~ 45 (476)
+++|+++++ -++.|--.-...||..|+++|.+|.++-.+.
T Consensus 102 ~~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~ 143 (299)
T 3cio_A 102 TENNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADL 143 (299)
T ss_dssp CSCCEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCeEEEEECCCCCCChHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 455665555 3577999999999999999999999998754
No 93
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=67.32 E-value=16 Score=32.03 Aligned_cols=31 Identities=23% Similarity=0.177 Sum_probs=23.8
Q ss_pred CceEEE-ECCCcc-hHHHHHHHcCCCeEEEecC
Q 011832 111 PVSCII-GDACME-FVVDVATELEIPVIHFRAI 141 (476)
Q Consensus 111 ~~DlvI-~D~~~~-~~~~vA~~l~iP~i~~~~~ 141 (476)
.||+|| +|+... -++.=|.++|||+|.+.-+
T Consensus 157 ~Pdll~v~Dp~~e~~ai~EA~~l~IPvIaivDT 189 (231)
T 3bbn_B 157 LPDIVIIVDQQEEYTALRECITLGIPTICLIDT 189 (231)
T ss_dssp CCSEEEESCTTTTHHHHHHHHTTTCCEEECCCS
T ss_pred CCCEEEEeCCccccHHHHHHHHhCCCEEEEecC
Confidence 589877 666555 5677799999999998643
No 94
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=67.32 E-value=3.6 Score=38.72 Aligned_cols=34 Identities=18% Similarity=0.135 Sum_probs=26.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
+++|||+|+..|..| ..+|..|+++||+|+++..
T Consensus 2 m~~mki~iiG~G~~G-----~~~a~~L~~~g~~V~~~~r 35 (359)
T 1bg6_A 2 IESKTYAVLGLGNGG-----HAFAAYLALKGQSVLAWDI 35 (359)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCcCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 456899999776555 4578889999999998865
No 95
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=66.59 E-value=8.3 Score=33.22 Aligned_cols=48 Identities=13% Similarity=0.084 Sum_probs=40.9
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhc
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHERLIRY 53 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~ 53 (476)
++.+|++.+.++..|-....-++..|..+|++|..++.....+.+.+.
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l~~~ 134 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKFVEA 134 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHHHHH
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH
Confidence 456899999999999999999999999999999999886555555433
No 96
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=66.28 E-value=3.3 Score=38.16 Aligned_cols=38 Identities=21% Similarity=0.033 Sum_probs=26.7
Q ss_pred CCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 1 MEEKPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 1 ~~~~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|....+.|||.|+..|..| ..+|+.|+++||+|+++..
T Consensus 1 M~~~~~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 38 (303)
T 3g0o_A 1 MSLTGTDFHVGIVGLGSMG-----MGAARSCLRAGLSTWGADL 38 (303)
T ss_dssp ------CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCCCCCCeEEEECCCHHH-----HHHHHHHHHCCCeEEEEEC
Confidence 5555667899999766555 4689999999999999865
No 97
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=66.11 E-value=16 Score=33.27 Aligned_cols=42 Identities=12% Similarity=0.221 Sum_probs=32.9
Q ss_pred CCCCEEEEEc--CCCccCHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 011832 5 PKSPHILIFP--LPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHN 46 (476)
Q Consensus 5 ~~~~~il~~~--~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~ 46 (476)
.++.|+++++ -++.|--.-...||..|++.|.+|.++-.+..
T Consensus 89 ~~~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~~ 132 (286)
T 3la6_A 89 QAQNNVLMMTGVSPSIGMTFVCANLAAVISQTNKRVLLIDCDMR 132 (286)
T ss_dssp TTTCCEEEEEESSSSSSHHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred CCCCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeccCC
Confidence 3445665554 45778899999999999999999999987543
No 98
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=66.10 E-value=8.3 Score=33.27 Aligned_cols=41 Identities=17% Similarity=0.278 Sum_probs=33.0
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 011832 4 KPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHN 46 (476)
Q Consensus 4 ~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~ 46 (476)
..+++||++.-.|+.+-+. ...|.+.|.++| +|.++.++.-
T Consensus 16 ~l~~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A 56 (209)
T 1mvl_A 16 TPRKPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSS 56 (209)
T ss_dssp ---CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGG
T ss_pred ccCCCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchH
Confidence 3456899999989888766 899999999999 9999998543
No 99
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=65.49 E-value=6.6 Score=33.84 Aligned_cols=41 Identities=15% Similarity=-0.072 Sum_probs=33.2
Q ss_pred CCCCCEEEEEcCCCccCHHH-HHHHHHHHHhCCCEEEEEeCCc
Q 011832 4 KPKSPHILIFPLPCQSHMNS-MLKLAEIFGLAGLKVTFLNSKH 45 (476)
Q Consensus 4 ~~~~~~il~~~~~~~gH~~p-~l~La~~L~~rGH~Vt~~~~~~ 45 (476)
+.+.+||++.-.|+ +..+- ...+.+.|.++|++|.++.++.
T Consensus 2 ~l~~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~ 43 (207)
T 3mcu_A 2 SLKGKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYT 43 (207)
T ss_dssp CCTTCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC-
T ss_pred CCCCCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehH
Confidence 35567998888787 45665 8899999999999999999854
No 100
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=65.15 E-value=4.2 Score=32.02 Aligned_cols=33 Identities=15% Similarity=0.281 Sum_probs=24.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
+.|||+++.. |.+- ..+++.|.++||+|+++..
T Consensus 3 ~~m~i~IiG~---G~iG--~~~a~~L~~~g~~v~~~d~ 35 (140)
T 1lss_A 3 HGMYIIIAGI---GRVG--YTLAKSLSEKGHDIVLIDI 35 (140)
T ss_dssp --CEEEEECC---SHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECC---CHHH--HHHHHHHHhCCCeEEEEEC
Confidence 4589998843 5553 4678999999999999976
No 101
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=64.44 E-value=29 Score=31.96 Aligned_cols=110 Identities=10% Similarity=0.015 Sum_probs=56.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhcccccccccCCCCeeEEecCCCCCCCCCCCCCcH
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHERLIRYTDIHDRFLQYSEFQFKTISDGLPADHPRAGDQL 86 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~ 86 (476)
+|||+|+..+..+- ...++|.++||+|..+.+.+....-.... .. .+.+.-.....++|--......
T Consensus 2 ~mrivf~Gtp~fa~-----~~L~~L~~~~~~v~~Vvt~pd~~~grg~~-----l~-~~~v~~~A~~~gIpv~~~~~~~-- 68 (314)
T 3tqq_A 2 SLKIVFAGTPQFAV-----PTLRALIDSSHRVLAVYTQPDRPSGRGQK-----IM-ESPVKEIARQNEIPIIQPFSLR-- 68 (314)
T ss_dssp CCEEEEEECSGGGH-----HHHHHHHHSSSEEEEEECCCC----------------CCHHHHHHHHTTCCEECCSCSS--
T ss_pred CcEEEEECCCHHHH-----HHHHHHHHCCCeEEEEEeCCCCccccCCc-----cC-CCHHHHHHHHcCCCEECcccCC--
Confidence 68999999886653 45678888999988777644322100000 00 0000000000011110000111
Q ss_pred HHHHHHHHhhchHHHHHHHhcCCCCceEEEECCCcc-hHHHHHHHcCCCeEEEecCc
Q 011832 87 MEMFDSLSLNTRPLLKQMLIDTSPPVSCIIGDACME-FVVDVATELEIPVIHFRAIS 142 (476)
Q Consensus 87 ~~~~~~~~~~~~~~l~~ll~~~~~~~DlvI~D~~~~-~~~~vA~~l~iP~i~~~~~~ 142 (476)
.+.+.+.+++. +||++|+=.+.. -...+-+.....++-++++.
T Consensus 69 -----------~~~~~~~l~~~--~~Dliv~~~~~~ilp~~il~~~~~g~iNiHpSl 112 (314)
T 3tqq_A 69 -----------DEVEQEKLIAM--NADVMVVVAYGLILPKKALNAFRLGCVNVHASL 112 (314)
T ss_dssp -----------SHHHHHHHHTT--CCSEEEEESCCSCCCHHHHTSSTTCEEEEESSC
T ss_pred -----------CHHHHHHHHhc--CCCEEEEcCcccccCHHHHhhCcCCEEEecCcc
Confidence 12455667776 889999876654 33455555556678887763
No 102
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=64.23 E-value=15 Score=32.03 Aligned_cols=145 Identities=12% Similarity=0.017 Sum_probs=76.1
Q ss_pred CCeEEEEEeccccccCHHHHHHHHHHHHhcCCceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccChHHHhhcccccc
Q 011832 288 VRSVLYVSFGSITLLKREQLIEFWHGLVDSKQRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQEEVLAHQAVAG 367 (476)
Q Consensus 288 ~~~~I~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~ 367 (476)
.+++++|..|..+ ..-+..|...|..+.++-... ...+..+.+ ..++.+....-+.+.|..+++
T Consensus 31 gk~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap~~-----~~~l~~l~~--~~~i~~i~~~~~~~dL~~adL-- 94 (223)
T 3dfz_A 31 GRSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAPTV-----SAEINEWEA--KGQLRVKRKKVGEEDLLNVFF-- 94 (223)
T ss_dssp TCCEEEECCSHHH-------HHHHHHHGGGCCCEEEECSSC-----CHHHHHHHH--TTSCEEECSCCCGGGSSSCSE--
T ss_pred CCEEEEECCCHHH-------HHHHHHHHHCCCEEEEECCCC-----CHHHHHHHH--cCCcEEEECCCCHhHhCCCCE--
Confidence 5668888877554 335566777788876654321 112333322 234555433334456767776
Q ss_pred cccccCchhHHHHHhhCCceeccCC-cccchhhHH-----HHHhhhcceeeccc----ccCHHHHHHHHHHHHhHhHHHH
Q 011832 368 FLTHSGWNSTLESIVAGVPMICWPY-FADQQINSR-----FVSEVWNLGLDMKD----VCDRNVVEKMVNDLMVERKEEF 437 (476)
Q Consensus 368 ~I~HGG~~s~~eal~~GvP~l~iP~-~~DQ~~na~-----~v~~~~G~G~~~~~----~~~~~~l~~~i~~~l~~~~~~y 437 (476)
+|.--|.-.+.+.++.-.- ..+|. ..|.+..+. .+ ++-++-+.+.. -.-+..|++.|...|..+...+
T Consensus 95 VIaAT~d~~~N~~I~~~ak-~gi~VNvvD~p~~~~f~~Paiv-~rg~l~iaIST~G~sP~la~~iR~~ie~~lp~~~~~~ 172 (223)
T 3dfz_A 95 IVVATNDQAVNKFVKQHIK-NDQLVNMASSFSDGNIQIPAQF-SRGRLSLAISTDGASPLLTKRIKEDLSSNYDESYTQY 172 (223)
T ss_dssp EEECCCCTHHHHHHHHHSC-TTCEEEC-----CCSEECCEEE-EETTEEEEEECTTSCHHHHHHHHHHHHHHSCTHHHHH
T ss_pred EEECCCCHHHHHHHHHHHh-CCCEEEEeCCcccCeEEEeeEE-EeCCEEEEEECCCCCcHHHHHHHHHHHHHccHHHHHH
Confidence 8888887666655554222 33332 335444332 23 33233333331 2345677777777776323456
Q ss_pred HHHHHHHHHHHHH
Q 011832 438 MRAADRMATMART 450 (476)
Q Consensus 438 ~~~a~~~~~~~~~ 450 (476)
-+.+.++++.+++
T Consensus 173 ~~~~~~~R~~vk~ 185 (223)
T 3dfz_A 173 TQFLYECRVLIHR 185 (223)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 6677777777665
No 103
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=63.98 E-value=17 Score=34.08 Aligned_cols=46 Identities=13% Similarity=0.133 Sum_probs=35.3
Q ss_pred CCEEEEEc-CCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhc
Q 011832 7 SPHILIFP-LPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHERLIRY 53 (476)
Q Consensus 7 ~~~il~~~-~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~ 53 (476)
.++|+|++ -|+.|-..-..+||..|+++|++|.++..+. ...+...
T Consensus 25 ~~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~-~~~l~~~ 71 (349)
T 3ug7_A 25 GTKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDP-AHSLRDI 71 (349)
T ss_dssp SCEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCT-TCHHHHH
T ss_pred CCEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC-CCCHHHH
Confidence 34555554 4677999999999999999999999999976 3444333
No 104
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=63.44 E-value=11 Score=33.78 Aligned_cols=47 Identities=11% Similarity=0.077 Sum_probs=39.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchhhhh
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHERLI 51 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~ 51 (476)
.++.+|++.+.++..|-....-++..|.++|++|..++.....+.+.
T Consensus 121 ~~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp~e~l~ 167 (258)
T 2i2x_B 121 KTKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDVPAEEVL 167 (258)
T ss_dssp CCSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEECCSHHHH
T ss_pred CCCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHH
Confidence 35679999999999999999999999999999999988754444443
No 105
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=63.22 E-value=12 Score=32.51 Aligned_cols=49 Identities=12% Similarity=0.155 Sum_probs=41.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhc
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHERLIRY 53 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~ 53 (476)
.++.||++.+.++-.|-....-++..|..+|++|..++.....+.+.+.
T Consensus 90 ~~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~iv~~ 138 (215)
T 3ezx_A 90 EEAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENVVEE 138 (215)
T ss_dssp --CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHHHHH
T ss_pred CCCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHHHHH
Confidence 4568999999999999999999999999999999999886665655433
No 106
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=63.19 E-value=3.7 Score=38.47 Aligned_cols=34 Identities=21% Similarity=0.142 Sum_probs=28.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
+.|||+|+..|+.| ..+|..|+++||+|+++...
T Consensus 2 ~~mkI~IiGaG~~G-----~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 2 SLTRICIVGAGAVG-----GYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCCEEEESCCHHH-----HHHHHHHHHTTCCEEEECCH
T ss_pred CCCEEEEECcCHHH-----HHHHHHHHHCCCEEEEEECh
Confidence 35899999877666 46789999999999999864
No 107
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=62.87 E-value=9.4 Score=32.72 Aligned_cols=41 Identities=17% Similarity=-0.027 Sum_probs=33.9
Q ss_pred CCCCEEEEEcCCCccCHH-HHHHHHHHHHhCCCEEEEEeCCcc
Q 011832 5 PKSPHILIFPLPCQSHMN-SMLKLAEIFGLAGLKVTFLNSKHN 46 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~-p~l~La~~L~~rGH~Vt~~~~~~~ 46 (476)
.+.+||++.-.|+ +..+ -...+.+.|.++|++|.++.++.-
T Consensus 5 l~~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A 46 (201)
T 3lqk_A 5 FAGKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTV 46 (201)
T ss_dssp CTTCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCS
T ss_pred cCCCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhH
Confidence 4567898888887 5555 789999999999999999998543
No 108
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=62.82 E-value=10 Score=32.39 Aligned_cols=38 Identities=8% Similarity=-0.005 Sum_probs=32.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC-CCEEEEEeCCcc
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLA-GLKVTFLNSKHN 46 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~r-GH~Vt~~~~~~~ 46 (476)
|||++.-.|+.|-+. ...+.+.|.++ |++|.++.++.-
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A 39 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWA 39 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchH
Confidence 688888888877765 89999999999 999999999543
No 109
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=59.77 E-value=63 Score=27.81 Aligned_cols=104 Identities=10% Similarity=0.057 Sum_probs=58.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCC--EEEEEeCCcchhhh---hhcccccccccCCCCeeEEecCCCCCCCCCCC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGL--KVTFLNSKHNHERL---IRYTDIHDRFLQYSEFQFKTISDGLPADHPRA 82 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH--~Vt~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~ 82 (476)
|||+|+..++.+ -+.++.+.|.+.+| +|..+.+....... .+.. ++.+..++. ....
T Consensus 2 ~rI~vl~SG~g~---~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~----------gIp~~~~~~----~~~~- 63 (216)
T 2ywr_A 2 LKIGVLVSGRGS---NLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKH----------NVECKVIQR----KEFP- 63 (216)
T ss_dssp EEEEEEECSCCH---HHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHH----------TCCEEECCG----GGSS-
T ss_pred CEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHc----------CCCEEEeCc----cccc-
Confidence 589988766553 36677788888888 76555443321111 1111 244433321 0010
Q ss_pred CCcHHHHHHHHHhhchHHHHHHHhcCCCCceEEEECCCcc-hHHHHHHHcCCCeEEEecC
Q 011832 83 GDQLMEMFDSLSLNTRPLLKQMLIDTSPPVSCIIGDACME-FVVDVATELEIPVIHFRAI 141 (476)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~DlvI~D~~~~-~~~~vA~~l~iP~i~~~~~ 141 (476)
+ .....+.+.+.+++. ++|+||+=.+.. ....+-+.+...++-++++
T Consensus 64 --~--------r~~~~~~~~~~l~~~--~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 111 (216)
T 2ywr_A 64 --S--------KKEFEERMALELKKK--GVELVVLAGFMRILSHNFLKYFPNKVINIHPS 111 (216)
T ss_dssp --S--------HHHHHHHHHHHHHHT--TCCEEEESSCCSCCCHHHHTTSTTCEEEEESS
T ss_pred --c--------hhhhhHHHHHHHHhc--CCCEEEEeCchhhCCHHHHhhccCCeEEEcCC
Confidence 1 111234466777776 889999877754 4455666666678887664
No 110
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=59.08 E-value=14 Score=33.42 Aligned_cols=39 Identities=18% Similarity=0.111 Sum_probs=25.5
Q ss_pred CCCCEEEEEc-CCCccCHHH--HHHHHHHHHhCCCEEEEEeC
Q 011832 5 PKSPHILIFP-LPCQSHMNS--MLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 5 ~~~~~il~~~-~~~~gH~~p--~l~La~~L~~rGH~Vt~~~~ 43 (476)
+++||||++- .|-..-++- .-.+.+.|.++||+|+++-=
T Consensus 20 m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~DL 61 (280)
T 4gi5_A 20 FQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSDL 61 (280)
T ss_dssp --CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEET
T ss_pred hhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEEc
Confidence 6789998775 444433333 34567888899999999753
No 111
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=58.82 E-value=11 Score=34.01 Aligned_cols=34 Identities=32% Similarity=0.332 Sum_probs=26.1
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
+.|||+|.. + |- --..|++.|.++||+|+.++-.
T Consensus 2 ~~~~ilVtG--a-G~--iG~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 2 SLSKILIAG--C-GD--LGLELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp CCCCEEEEC--C-SH--HHHHHHHHHHHTTCCEEEEECT
T ss_pred CCCcEEEEC--C-CH--HHHHHHHHHHHCCCEEEEEeCC
Confidence 356888873 4 64 3567899999999999999863
No 112
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=58.75 E-value=9.3 Score=32.95 Aligned_cols=34 Identities=15% Similarity=0.116 Sum_probs=25.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
.|||+++ |+.|.+- ..|++.|.++||+|+.+.-.
T Consensus 4 m~~ilIt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 4 VKKIVLI--GASGFVG--SALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp CCEEEEE--TCCHHHH--HHHHHHHHTTTCEEEEECSC
T ss_pred CCEEEEE--cCCchHH--HHHHHHHHHCCCEEEEEEcC
Confidence 3577766 4555443 57899999999999998863
No 113
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=58.65 E-value=5.7 Score=36.62 Aligned_cols=38 Identities=13% Similarity=0.209 Sum_probs=29.3
Q ss_pred CCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 1 MEEKPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 1 ~~~~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|+.+.+.|||+|+-.|..| ..+|+.|+++||+|+++..
T Consensus 3 m~~~~~~~~IgiIG~G~mG-----~~~A~~l~~~G~~V~~~dr 40 (306)
T 3l6d_A 3 LSDESFEFDVSVIGLGAMG-----TIMAQVLLKQGKRVAIWNR 40 (306)
T ss_dssp CCCCCCSCSEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCcccCCCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 3445567899999766555 4789999999999998854
No 114
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=57.39 E-value=13 Score=29.80 Aligned_cols=35 Identities=11% Similarity=0.018 Sum_probs=28.6
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 10 ILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 10 il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
.+++..+..-...+.+.+|...++.|++|+++.+.
T Consensus 11 ~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~ 45 (144)
T 2qs7_A 11 SIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTF 45 (144)
T ss_dssp EEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECH
T ss_pred EEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEeh
Confidence 34444556688889999999999999999999984
No 115
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=57.15 E-value=12 Score=28.87 Aligned_cols=44 Identities=9% Similarity=-0.034 Sum_probs=32.3
Q ss_pred CCCCCCEEEEEcCCCccCH--HHHHHHHHHHHhCC--CEEEEEeCCcc
Q 011832 3 EKPKSPHILIFPLPCQSHM--NSMLKLAEIFGLAG--LKVTFLNSKHN 46 (476)
Q Consensus 3 ~~~~~~~il~~~~~~~gH~--~p~l~La~~L~~rG--H~Vt~~~~~~~ 46 (476)
.|.-+||++|+-+-..-.. +..+.+|....++| |+|.++...+-
T Consensus 3 ~~~~~~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G~~ 50 (117)
T 2fb6_A 3 AMSANDKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWGAS 50 (117)
T ss_dssp CSSTTSEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECSHH
T ss_pred ccccCCeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEECCe
Confidence 4555689888876643222 44788999999999 89999998543
No 116
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=56.96 E-value=6 Score=36.25 Aligned_cols=34 Identities=12% Similarity=-0.083 Sum_probs=27.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
+.+|||.|+-.|..| ..+|+.|+++||+|+++..
T Consensus 13 ~~~~~I~vIG~G~mG-----~~~A~~l~~~G~~V~~~dr 46 (296)
T 3qha_A 13 TEQLKLGYIGLGNMG-----APMATRMTEWPGGVTVYDI 46 (296)
T ss_dssp --CCCEEEECCSTTH-----HHHHHHHTTSTTCEEEECS
T ss_pred cCCCeEEEECcCHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 346799999877766 4689999999999999865
No 117
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=56.90 E-value=10 Score=34.90 Aligned_cols=40 Identities=20% Similarity=0.201 Sum_probs=30.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhc
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHERLIRY 53 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~ 53 (476)
|||+|+..|+.| ..+|..|+++||+|+++.... .+.+.+.
T Consensus 3 mkI~IiGaGaiG-----~~~a~~L~~~g~~V~~~~r~~-~~~i~~~ 42 (312)
T 3hn2_A 3 LRIAIVGAGALG-----LYYGALLQRSGEDVHFLLRRD-YEAIAGN 42 (312)
T ss_dssp -CEEEECCSTTH-----HHHHHHHHHTSCCEEEECSTT-HHHHHHT
T ss_pred CEEEEECcCHHH-----HHHHHHHHHCCCeEEEEEcCc-HHHHHhC
Confidence 789999888887 456889999999999998754 4444433
No 118
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=56.33 E-value=11 Score=34.26 Aligned_cols=34 Identities=21% Similarity=0.102 Sum_probs=25.8
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
.++|||+|+..|..|. .+++.|.+.||+|+++..
T Consensus 2 ~~~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 2 EKSIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp --CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCCEEEEECccHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 3568999998776664 468889999999987754
No 119
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=55.91 E-value=17 Score=30.38 Aligned_cols=38 Identities=13% Similarity=0.062 Sum_probs=31.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHN 46 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~ 46 (476)
+||++.-.|+.+=+. ...+.+.|.++|++|.++.++.-
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~A 43 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTNG 43 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTGG
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcCH
Confidence 588888877766554 88999999999999999998543
No 120
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=55.21 E-value=1e+02 Score=26.44 Aligned_cols=103 Identities=8% Similarity=-0.022 Sum_probs=60.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCcchhhh---hhcccccccccCCCCeeEEecCC-CCCCCCCC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLA--GLKVTFLNSKHNHERL---IRYTDIHDRFLQYSEFQFKTISD-GLPADHPR 81 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~r--GH~Vt~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~~l~~-~~~~~~~~ 81 (476)
|||+++..+..+ -+.+|.+.+.+. +|+|..+.+....... .+.. ++.+..++. .+.
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~----------gIp~~~~~~~~~~----- 62 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQA----------GIATHTLIASAFD----- 62 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHT----------TCEEEECCGGGCS-----
T ss_pred CEEEEEEECCcH---HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHc----------CCcEEEeCccccc-----
Confidence 588888876664 366777777666 6887666554322111 1111 245444321 111
Q ss_pred CCCcHHHHHHHHHhhchHHHHHHHhcCCCCceEEEECCCcc-hHHHHHHHcCCCeEEEecC
Q 011832 82 AGDQLMEMFDSLSLNTRPLLKQMLIDTSPPVSCIIGDACME-FVVDVATELEIPVIHFRAI 141 (476)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~DlvI~D~~~~-~~~~vA~~l~iP~i~~~~~ 141 (476)
+ . ....+.+.+.+++. +||+||+=.+.. ....+-..+...++-++++
T Consensus 63 ---~-r-------~~~~~~~~~~l~~~--~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 110 (212)
T 1jkx_A 63 ---S-R-------EAYDRELIHEIDMY--APDVVVLAGFMRILSPAFVSHYAGRLLNIHPS 110 (212)
T ss_dssp ---S-H-------HHHHHHHHHHHGGG--CCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ---c-h-------hhccHHHHHHHHhc--CCCEEEEeChhhhCCHHHHhhccCCEEEEccC
Confidence 0 1 11234566777777 889999887754 4456667777778887664
No 121
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=54.49 E-value=75 Score=27.95 Aligned_cols=40 Identities=15% Similarity=0.106 Sum_probs=31.2
Q ss_pred CEEE-EEc-CCCccCHHHHHHHHHHHHhCCCEEEEEeCCcch
Q 011832 8 PHIL-IFP-LPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNH 47 (476)
Q Consensus 8 ~~il-~~~-~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~ 47 (476)
+|++ |+. -|+.|--.-...||..|+++|++|.++-.....
T Consensus 18 ~~vI~v~s~kGGvGKTT~a~nLA~~la~~G~~VlliD~D~~~ 59 (262)
T 2ph1_A 18 KSRIAVMSGKGGVGKSTVTALLAVHYARQGKKVGILDADFLG 59 (262)
T ss_dssp SCEEEEECSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCSSC
T ss_pred CeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 4444 443 456688999999999999999999998876554
No 122
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=54.33 E-value=8.7 Score=36.32 Aligned_cols=35 Identities=11% Similarity=0.035 Sum_probs=26.6
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 4 KPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 4 ~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|++.|||+|+-.|..| ..+|..|+++||+|+++..
T Consensus 19 Mm~~mkIgiIGlG~mG-----~~~A~~L~~~G~~V~v~dr 53 (358)
T 4e21_A 19 YFQSMQIGMIGLGRMG-----ADMVRRLRKGGHECVVYDL 53 (358)
T ss_dssp ---CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred hhcCCEEEEECchHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 5667899999766544 5789999999999998865
No 123
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=54.28 E-value=14 Score=31.47 Aligned_cols=33 Identities=18% Similarity=0.095 Sum_probs=25.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
|||+++ |+.|.+- ..|++.|+++||+|+.++-.
T Consensus 1 MkvlVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGII--GATGRAG--SRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CeEEEE--cCCchhH--HHHHHHHHhCCCEEEEEEcC
Confidence 677665 4555543 58899999999999999863
No 124
>3r8n_B 30S ribosomal protein S2; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_B 3fih_B* 3j18_B* 2wwl_B 3oar_B 3oaq_B 3ofb_B 3ofa_B 3ofp_B 3ofx_B 3ofy_B 3ofo_B 3r8o_B 4a2i_B 4gd1_B 4gd2_B 3i1m_B 1vs7_B* 3e1a_B 3e1c_B ...
Probab=54.02 E-value=18 Score=31.38 Aligned_cols=32 Identities=25% Similarity=0.251 Sum_probs=24.5
Q ss_pred CCceEEE-ECCCcc-hHHHHHHHcCCCeEEEecC
Q 011832 110 PPVSCII-GDACME-FVVDVATELEIPVIHFRAI 141 (476)
Q Consensus 110 ~~~DlvI-~D~~~~-~~~~vA~~l~iP~i~~~~~ 141 (476)
..||+|| +|+... -++.=|.++|||+|.+.-+
T Consensus 148 ~~Pdllvv~Dp~~e~~ai~Ea~~l~IP~IalvDT 181 (218)
T 3r8n_B 148 GLPDALFVIDADHEHIAIKEANNLGIPVFAIVDT 181 (218)
T ss_dssp SCCCSCEEEETGGGHHHHHHHHHHTCCCEEECCS
T ss_pred cCCCeEEecCcccccHHHHHHHHhCCCEEEEEeC
Confidence 3678755 787766 6677799999999998654
No 125
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=53.95 E-value=9.1 Score=33.56 Aligned_cols=39 Identities=8% Similarity=-0.024 Sum_probs=34.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHN 46 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~ 46 (476)
|||+|..-|+.|--.-...||..|+++|++|.++-....
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 39 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDPD 39 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECTT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 789997777778899999999999999999999987553
No 126
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=53.87 E-value=13 Score=34.59 Aligned_cols=34 Identities=32% Similarity=0.255 Sum_probs=29.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
.+||.|+..++.| |..+|+-|.++||+|+..-..
T Consensus 4 ~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~~ 37 (326)
T 3eag_A 4 MKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDAK 37 (326)
T ss_dssp CCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEESS
T ss_pred CcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcCC
Confidence 5689999999887 667999999999999998653
No 127
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=53.81 E-value=18 Score=31.66 Aligned_cols=40 Identities=15% Similarity=0.078 Sum_probs=36.1
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKH 45 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~ 45 (476)
.+++|++..-|+.|-..-++++|..|+++|++|.++...+
T Consensus 5 g~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 5 GRLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CCEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred ceEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 4678999999999999999999999999999998888755
No 128
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=53.78 E-value=22 Score=31.18 Aligned_cols=26 Identities=23% Similarity=0.286 Sum_probs=21.3
Q ss_pred ccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 011832 18 QSHMNSMLKLAEIFGLAGLKVTFLNSKH 45 (476)
Q Consensus 18 ~gH~~p~l~La~~L~~rGH~Vt~~~~~~ 45 (476)
.|. .-.++|++|+++|++|++++.+.
T Consensus 28 SG~--mG~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 28 TGH--LGKIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp CCH--HHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCH--HHHHHHHHHHHCCCEEEEEeCCc
Confidence 554 45678999999999999999753
No 129
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=53.56 E-value=9.7 Score=33.48 Aligned_cols=34 Identities=24% Similarity=0.232 Sum_probs=29.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
+..|||.|+..|..|- +||+.|.++||+|+.+..
T Consensus 4 ~~~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 4 APRLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCCCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSS
T ss_pred CCCcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecC
Confidence 4578999999988874 689999999999998765
No 130
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=53.49 E-value=46 Score=26.14 Aligned_cols=48 Identities=8% Similarity=-0.134 Sum_probs=34.4
Q ss_pred hCCceeccCCcccchhhHHHHHhhhcceeecccccCHHHHHHHHHHHHhH
Q 011832 383 AGVPMICWPYFADQQINSRFVSEVWNLGLDMKDVCDRNVVEKMVNDLMVE 432 (476)
Q Consensus 383 ~GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~l~~~i~~~l~~ 432 (476)
..+|++++--..|.. ..... -+.|+--.+.+.++.++|..+|++++..
T Consensus 74 ~~~pii~ls~~~~~~-~~~~~-~~~g~~~~l~kP~~~~~L~~~i~~~~~~ 121 (155)
T 1qkk_A 74 PDLPMILVTGHGDIP-MAVQA-IQDGAYDFIAKPFAADRLVQSARRAEEK 121 (155)
T ss_dssp TTSCEEEEECGGGHH-HHHHH-HHTTCCEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChH-HHHHH-HhcCCCeEEeCCCCHHHHHHHHHHHHHH
Confidence 478888886554433 33444 3458766777789999999999999874
No 131
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=53.18 E-value=12 Score=34.69 Aligned_cols=40 Identities=13% Similarity=0.106 Sum_probs=30.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhc
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHERLIRY 53 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~ 53 (476)
|||+|+..|+.| ..+|..|+++||+|+++.... .+.+.+.
T Consensus 3 mkI~IiGaGaiG-----~~~a~~L~~~g~~V~~~~r~~-~~~i~~~ 42 (320)
T 3i83_A 3 LNILVIGTGAIG-----SFYGALLAKTGHCVSVVSRSD-YETVKAK 42 (320)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHHTTCEEEEECSTT-HHHHHHH
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCCh-HHHHHhC
Confidence 799999887766 467889999999999998754 4444443
No 132
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=52.82 E-value=15 Score=33.89 Aligned_cols=34 Identities=21% Similarity=0.239 Sum_probs=28.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
.+.|||+|+..|..| ..+|+.|+++||+|+++..
T Consensus 29 ~~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 62 (320)
T 4dll_A 29 PYARKITFLGTGSMG-----LPMARRLCEAGYALQVWNR 62 (320)
T ss_dssp CCCSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred cCCCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcC
Confidence 345899999887777 6788999999999998865
No 133
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=52.71 E-value=7.8 Score=35.89 Aligned_cols=31 Identities=13% Similarity=0.189 Sum_probs=25.5
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEE
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFL 41 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~ 41 (476)
.+|||+|+..|+.| ..+|..|+++||+|+++
T Consensus 18 ~~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~ 48 (318)
T 3hwr_A 18 QGMKVAIMGAGAVG-----CYYGGMLARAGHEVILI 48 (318)
T ss_dssp --CEEEEESCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred cCCcEEEECcCHHH-----HHHHHHHHHCCCeEEEE
Confidence 46899999887766 56789999999999999
No 134
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=52.50 E-value=81 Score=24.60 Aligned_cols=108 Identities=11% Similarity=-0.013 Sum_probs=64.1
Q ss_pred ccCHHHHHHHHHHHHhcCCceEEEECCCCCCCchhhHHHHHHhhcCCceEeec-cChHHHhhcccccccccccCchhHHH
Q 011832 301 LLKREQLIEFWHGLVDSKQRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSW-VPQEEVLAHQAVAGFLTHSGWNSTLE 379 (476)
Q Consensus 301 ~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~-~pq~~lL~~~~~~~~I~HGG~~s~~e 379 (476)
..++.....+...++..|+..+.....+ .+.+.-+.+ -+-.+.+.+| .|..+ | -.+.+
T Consensus 19 DD~~~~r~~l~~~L~~~G~~~v~~a~~g-----~~al~~~~~-~~~DlillD~~MP~md--------------G-~el~~ 77 (134)
T 3to5_A 19 DDFSTMRRIVKNLLRDLGFNNTQEADDG-----LTALPMLKK-GDFDFVVTDWNMPGMQ--------------G-IDLLK 77 (134)
T ss_dssp CSCHHHHHHHHHHHHHTTCCCEEEESSH-----HHHHHHHHH-HCCSEEEEESCCSSSC--------------H-HHHHH
T ss_pred eCCHHHHHHHHHHHHHcCCcEEEEECCH-----HHHHHHHHh-CCCCEEEEcCCCCCCC--------------H-HHHHH
Confidence 4555666667778888888755544322 111233333 2344555555 23221 1 12333
Q ss_pred HHh-----hCCceeccCCcccchhhHHHHHhhhcceeecccccCHHHHHHHHHHHHh
Q 011832 380 SIV-----AGVPMICWPYFADQQINSRFVSEVWNLGLDMKDVCDRNVVEKMVNDLMV 431 (476)
Q Consensus 380 al~-----~GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~l~~~i~~~l~ 431 (476)
.+. ..+|++++--..+.. ...+. .++|+--.+.|-++.++|.++|+++++
T Consensus 78 ~ir~~~~~~~ipvI~lTa~~~~~-~~~~~-~~~Ga~~yl~KP~~~~~L~~~i~~~l~ 132 (134)
T 3to5_A 78 NIRADEELKHLPVLMITAEAKRE-QIIEA-AQAGVNGYIVKPFTAATLKEKLDKIFE 132 (134)
T ss_dssp HHHHSTTTTTCCEEEEESSCCHH-HHHHH-HHTTCCEEEESSCCHHHHHHHHHHHCC
T ss_pred HHHhCCCCCCCeEEEEECCCCHH-HHHHH-HHCCCCEEEECCCCHHHHHHHHHHHHh
Confidence 332 468988886655544 44444 456888888888999999999998874
No 135
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=52.47 E-value=1.1e+02 Score=26.13 Aligned_cols=104 Identities=8% Similarity=0.054 Sum_probs=59.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCcchhhh---hhcccccccccCCCCeeEEecCCCCCCCCCCC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLA--GLKVTFLNSKHNHERL---IRYTDIHDRFLQYSEFQFKTISDGLPADHPRA 82 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~r--GH~Vt~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~ 82 (476)
|||+++-.++.+ -+.++.+.|.+. +|+|..+.+......+ .+.. ++.+..++. ....
T Consensus 4 ~ki~vl~sG~g~---~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~----------gIp~~~~~~----~~~~- 65 (212)
T 3av3_A 4 KRLAVFASGSGT---NFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARE----------NVPAFVFSP----KDYP- 65 (212)
T ss_dssp EEEEEECCSSCH---HHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHT----------TCCEEECCG----GGSS-
T ss_pred cEEEEEEECCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHc----------CCCEEEeCc----cccc-
Confidence 588888766644 356677888877 7898766654221111 1111 244443321 0010
Q ss_pred CCcHHHHHHHHHhhchHHHHHHHhcCCCCceEEEECCCcc-hHHHHHHHcCCCeEEEecC
Q 011832 83 GDQLMEMFDSLSLNTRPLLKQMLIDTSPPVSCIIGDACME-FVVDVATELEIPVIHFRAI 141 (476)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~DlvI~D~~~~-~~~~vA~~l~iP~i~~~~~ 141 (476)
+ . ....+.+.+.+++. +||+||+=.+.. ....+-..+...++-++++
T Consensus 66 --~-~-------~~~~~~~~~~l~~~--~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 113 (212)
T 3av3_A 66 --S-K-------AAFESEILRELKGR--QIDWIALAGYMRLIGPTLLSAYEGKIVNIHPS 113 (212)
T ss_dssp --S-H-------HHHHHHHHHHHHHT--TCCEEEESSCCSCCCHHHHHHTTTCEEEEESS
T ss_pred --c-h-------hhhHHHHHHHHHhc--CCCEEEEchhhhhCCHHHHhhhcCCEEEEecC
Confidence 1 1 11234456677776 889999877654 4556667777778887664
No 136
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=52.10 E-value=13 Score=33.77 Aligned_cols=34 Identities=12% Similarity=0.015 Sum_probs=25.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
+|+|+++ |+.|.+ -..+++.|.++||+|+.++-.
T Consensus 4 ~~~ilVt--GatG~i--G~~l~~~L~~~g~~V~~~~R~ 37 (313)
T 1qyd_A 4 KSRVLIV--GGTGYI--GKRIVNASISLGHPTYVLFRP 37 (313)
T ss_dssp CCCEEEE--STTSTT--HHHHHHHHHHTTCCEEEECCS
T ss_pred CCEEEEE--cCCcHH--HHHHHHHHHhCCCcEEEEECC
Confidence 4567766 455555 356889999999999998764
No 137
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=51.97 E-value=21 Score=27.89 Aligned_cols=37 Identities=8% Similarity=-0.078 Sum_probs=26.8
Q ss_pred CEEEEEc-CCCc--cCHHHHHHHHHHHHhCCCEE-EEEeCC
Q 011832 8 PHILIFP-LPCQ--SHMNSMLKLAEIFGLAGLKV-TFLNSK 44 (476)
Q Consensus 8 ~~il~~~-~~~~--gH~~p~l~La~~L~~rGH~V-t~~~~~ 44 (476)
||++|+- .+-+ ......+.+|..+.+.||+| +++-..
T Consensus 1 mk~~iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~ 41 (130)
T 2hy5_A 1 MKFALQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYH 41 (130)
T ss_dssp CEEEEEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECG
T ss_pred CEEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEec
Confidence 4565554 3333 34567899999999999999 888763
No 138
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=50.98 E-value=1.2e+02 Score=26.09 Aligned_cols=106 Identities=8% Similarity=0.099 Sum_probs=59.5
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHh-CCCEEEEEeCCc-chhhh--hhcccccccccCCCCeeEEecCC-CCCCCC
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGL-AGLKVTFLNSKH-NHERL--IRYTDIHDRFLQYSEFQFKTISD-GLPADH 79 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~-rGH~Vt~~~~~~-~~~~~--~~~~~~~~~~~~~~~i~~~~l~~-~~~~~~ 79 (476)
.+++||+++-.+..+-+. +|.+...+ .+++|..+.+.. ..... .+.. ++.+..++. .++.
T Consensus 3 ~~~~riavl~SG~Gsnl~---all~~~~~~~~~eI~~Vis~~~~a~~~~~A~~~----------gIp~~~~~~~~~~~-- 67 (215)
T 3tqr_A 3 REPLPIVVLISGNGTNLQ---AIIGAIQKGLAIEIRAVISNRADAYGLKRAQQA----------DIPTHIIPHEEFPS-- 67 (215)
T ss_dssp -CCEEEEEEESSCCHHHH---HHHHHHHTTCSEEEEEEEESCTTCHHHHHHHHT----------TCCEEECCGGGSSS--
T ss_pred CCCcEEEEEEeCCcHHHH---HHHHHHHcCCCCEEEEEEeCCcchHHHHHHHHc----------CCCEEEeCccccCc--
Confidence 356899998877655544 44444443 368888766632 22111 1111 244444321 1110
Q ss_pred CCCCCcHHHHHHHHHhhchHHHHHHHhcCCCCceEEEECCCcc-hHHHHHHHcCCCeEEEecC
Q 011832 80 PRAGDQLMEMFDSLSLNTRPLLKQMLIDTSPPVSCIIGDACME-FVVDVATELEIPVIHFRAI 141 (476)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~DlvI~D~~~~-~~~~vA~~l~iP~i~~~~~ 141 (476)
. ...++.+.+.+++. ++|+||+=.+.. ....+-+.+.-.++-++++
T Consensus 68 -------r-------~~~d~~~~~~l~~~--~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 114 (215)
T 3tqr_A 68 -------R-------TDFESTLQKTIDHY--DPKLIVLAGFMRKLGKAFVSHYSGRMINIHPS 114 (215)
T ss_dssp -------H-------HHHHHHHHHHHHTT--CCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred -------h-------hHhHHHHHHHHHhc--CCCEEEEccchhhCCHHHHhhccCCeEEeCcc
Confidence 1 11134567778877 889999877754 4456666777778887664
No 139
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=50.87 E-value=7.6 Score=33.72 Aligned_cols=39 Identities=21% Similarity=0.125 Sum_probs=28.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchhh
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHER 49 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~ 49 (476)
++.|||+|+..|..| ..+|+.|+++||+|+++.. .+.++
T Consensus 21 m~mmkI~IIG~G~mG-----~~la~~l~~~g~~V~~v~~-r~~~~ 59 (220)
T 4huj_A 21 QSMTTYAIIGAGAIG-----SALAERFTAAQIPAIIANS-RGPAS 59 (220)
T ss_dssp GGSCCEEEEECHHHH-----HHHHHHHHHTTCCEEEECT-TCGGG
T ss_pred hcCCEEEEECCCHHH-----HHHHHHHHhCCCEEEEEEC-CCHHH
Confidence 345799999865544 4689999999999998554 34343
No 140
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=50.82 E-value=9.3 Score=30.19 Aligned_cols=33 Identities=15% Similarity=0.114 Sum_probs=25.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
.+||+++.. |.+ -..+++.|.++||+|+++...
T Consensus 6 ~~~v~I~G~---G~i--G~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 6 RYEYIVIGS---EAA--GVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CCSEEEECC---SHH--HHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEECC---CHH--HHHHHHHHHHCCCeEEEEECC
Confidence 457888865 443 468999999999999998863
No 141
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=50.76 E-value=15 Score=33.96 Aligned_cols=36 Identities=14% Similarity=0.072 Sum_probs=26.0
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 4 KPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 4 ~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|+++|+|+|.. +.|-+- ..|++.|+++||+|+.+.-
T Consensus 2 M~~~~~vlVTG--atG~iG--~~l~~~L~~~G~~V~~~~r 37 (341)
T 3enk_A 2 MSTKGTILVTG--GAGYIG--SHTAVELLAHGYDVVIADN 37 (341)
T ss_dssp CCSSCEEEEET--TTSHHH--HHHHHHHHHTTCEEEEECC
T ss_pred CCCCcEEEEec--CCcHHH--HHHHHHHHHCCCcEEEEec
Confidence 44566776653 445443 5789999999999998864
No 142
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=50.75 E-value=42 Score=28.95 Aligned_cols=110 Identities=5% Similarity=-0.043 Sum_probs=58.2
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHh-CCCEEEEEeCCcchhhhhhcccccccccCCCCeeEEecCCCCCCCCCCC
Q 011832 4 KPKSPHILIFPLPCQSHMNSMLKLAEIFGL-AGLKVTFLNSKHNHERLIRYTDIHDRFLQYSEFQFKTISDGLPADHPRA 82 (476)
Q Consensus 4 ~~~~~~il~~~~~~~gH~~p~l~La~~L~~-rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~ 82 (476)
...+|||+|+..+..+-+. +|.+.+.+ .+++|..+.+.......+.+.. .++.+...+. .. ..
T Consensus 9 ~~~~~ri~vl~SG~gsnl~---all~~~~~~~~~eI~~Vis~~~a~~~~~A~~--------~gIp~~~~~~--~~--~~- 72 (215)
T 3da8_A 9 PSAPARLVVLASGTGSLLR---SLLDAAVGDYPARVVAVGVDRECRAAEIAAE--------ASVPVFTVRL--AD--HP- 72 (215)
T ss_dssp CCSSEEEEEEESSCCHHHH---HHHHHSSTTCSEEEEEEEESSCCHHHHHHHH--------TTCCEEECCG--GG--SS-
T ss_pred CCCCcEEEEEEeCChHHHH---HHHHHHhccCCCeEEEEEeCCchHHHHHHHH--------cCCCEEEeCc--cc--cc-
Confidence 3457899999877655443 34444433 3468777666444222111110 0244433320 00 00
Q ss_pred CCcHHHHHHHHHhhchHHHHHHHhcCCCCceEEEECCCcc-hHHHHHHHcCCCeEEEecC
Q 011832 83 GDQLMEMFDSLSLNTRPLLKQMLIDTSPPVSCIIGDACME-FVVDVATELEIPVIHFRAI 141 (476)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~DlvI~D~~~~-~~~~vA~~l~iP~i~~~~~ 141 (476)
+ . ...++.+.+.+++. ++|+||+=.+.. -...+-+.+.-.++-++++
T Consensus 73 --~-r-------~~~d~~~~~~l~~~--~~Dlivlagy~~iL~~~~l~~~~~~~iNiHpS 120 (215)
T 3da8_A 73 --S-R-------DAWDVAITAATAAH--EPDLVVSAGFMRILGPQFLSRFYGRTLNTHPA 120 (215)
T ss_dssp --S-H-------HHHHHHHHHHHHTT--CCSEEEEEECCSCCCHHHHHHHTTTEEEEESS
T ss_pred --c-h-------hhhhHHHHHHHHhh--CCCEEEEcCchhhCCHHHHhhccCCeEEeCcc
Confidence 0 1 11145567778877 889999876654 4455556666667777653
No 143
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=50.67 E-value=16 Score=33.43 Aligned_cols=33 Identities=15% Similarity=0.054 Sum_probs=24.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 011832 9 HILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKH 45 (476)
Q Consensus 9 ~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~ 45 (476)
+|+|+ |+.|.+ -..+++.|.++||+|+.++-..
T Consensus 13 ~ilVt--GatG~i--G~~l~~~L~~~g~~V~~l~R~~ 45 (318)
T 2r6j_A 13 KILIF--GGTGYI--GNHMVKGSLKLGHPTYVFTRPN 45 (318)
T ss_dssp CEEEE--TTTSTT--HHHHHHHHHHTTCCEEEEECTT
T ss_pred eEEEE--CCCchH--HHHHHHHHHHCCCcEEEEECCC
Confidence 66665 455555 3578899999999999988643
No 144
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=50.67 E-value=19 Score=28.32 Aligned_cols=38 Identities=16% Similarity=0.050 Sum_probs=29.4
Q ss_pred CCEEEEEcCCC---ccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 7 SPHILIFPLPC---QSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 7 ~~~il~~~~~~---~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
.+|++|+-..+ .......+.+|...++.||+|+++-..
T Consensus 15 ~~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~ 55 (134)
T 3mc3_A 15 XXXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMI 55 (134)
T ss_dssp CCEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred cceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEe
Confidence 45776655443 466778899999999999999998874
No 145
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=50.63 E-value=11 Score=35.22 Aligned_cols=32 Identities=9% Similarity=0.123 Sum_probs=27.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
+|||.|+..|..| ..+|..|+++||+|+++..
T Consensus 14 ~~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r 45 (335)
T 1z82_A 14 EMRFFVLGAGSWG-----TVFAQMLHENGEEVILWAR 45 (335)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 6899999877666 5789999999999999876
No 146
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=50.51 E-value=10 Score=34.67 Aligned_cols=32 Identities=19% Similarity=0.219 Sum_probs=25.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
.|||+|+..|..| ..+|..|+++||+|+++..
T Consensus 3 ~m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r 34 (316)
T 2ew2_A 3 AMKIAIAGAGAMG-----SRLGIMLHQGGNDVTLIDQ 34 (316)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCeEEEECcCHHH-----HHHHHHHHhCCCcEEEEEC
Confidence 4799999766555 4678999999999999875
No 147
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=49.84 E-value=5.1 Score=36.93 Aligned_cols=33 Identities=21% Similarity=0.390 Sum_probs=26.5
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhC-----C-CEEEEEeC
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFGLA-----G-LKVTFLNS 43 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~~r-----G-H~Vt~~~~ 43 (476)
++|||+|+..|..|. .+|..|+++ | |+|+++..
T Consensus 7 ~~m~I~iiG~G~mG~-----~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 7 QPIKIAVFGLGGVGG-----YYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CCEEEEEECCSHHHH-----HHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCEEEEECcCHHHH-----HHHHHHHhCccccCCCCCEEEEEc
Confidence 348999998776663 568888888 9 99999875
No 148
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=49.68 E-value=11 Score=35.81 Aligned_cols=32 Identities=28% Similarity=0.209 Sum_probs=26.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
.|||+|+.-|-.| +.+|..|+++||+|+++--
T Consensus 1 sm~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~Er 32 (412)
T 4hb9_A 1 SMHVGIIGAGIGG-----TCLAHGLRKHGIKVTIYER 32 (412)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECcCHHH-----HHHHHHHHhCCCCEEEEec
Confidence 4899999765434 8899999999999999853
No 149
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=49.64 E-value=51 Score=31.98 Aligned_cols=42 Identities=21% Similarity=0.267 Sum_probs=35.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchh
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHE 48 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~ 48 (476)
+..|+++..++.|-..-...||..|.++|++|.++..+.+..
T Consensus 100 p~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R~ 141 (443)
T 3dm5_A 100 PTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRP 141 (443)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSST
T ss_pred CeEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcch
Confidence 445677778888999999999999999999999999876543
No 150
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=49.43 E-value=18 Score=32.29 Aligned_cols=42 Identities=14% Similarity=0.043 Sum_probs=33.6
Q ss_pred CCCCEEEEEcCCCc---cCHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 011832 5 PKSPHILIFPLPCQ---SHMNSMLKLAEIFGLAGLKVTFLNSKHN 46 (476)
Q Consensus 5 ~~~~~il~~~~~~~---gH~~p~l~La~~L~~rGH~Vt~~~~~~~ 46 (476)
++.||..|++.+-. |-=.-..+|+..|.+||++||+.=-++.
T Consensus 20 ~~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DPY 64 (295)
T 2vo1_A 20 FQSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPY 64 (295)
T ss_dssp -CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECS
T ss_pred cccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeecccc
Confidence 56899999996643 5667799999999999999999766543
No 151
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=49.17 E-value=10 Score=35.87 Aligned_cols=35 Identities=23% Similarity=0.213 Sum_probs=28.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
+++|||.|+..|..| ..+|..|+++||+|+++...
T Consensus 27 ~~~mkI~VIGaG~mG-----~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 27 PFKHPIAILGAGSWG-----TALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CCCSCEEEECCSHHH-----HHHHHHHHTTTCCEEEECSC
T ss_pred ccCCeEEEECccHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 346899999887666 46899999999999998863
No 152
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=49.12 E-value=1.3e+02 Score=26.09 Aligned_cols=37 Identities=14% Similarity=0.111 Sum_probs=30.1
Q ss_pred EEEEEc--CCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 011832 9 HILIFP--LPCQSHMNSMLKLAEIFGLAGLKVTFLNSKH 45 (476)
Q Consensus 9 ~il~~~--~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~ 45 (476)
|++.+. -++.|--.-...||..|+++|++|.++-...
T Consensus 3 ~vi~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 3 RIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp EEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred eEEEEECCCCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 454443 4567899999999999999999999988765
No 153
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=48.52 E-value=26 Score=30.56 Aligned_cols=39 Identities=8% Similarity=0.048 Sum_probs=23.7
Q ss_pred CCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 1 MEEKPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 1 ~~~~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|+.+.+.+++ +++ |+.|- --.++++.|+++|++|+++.-
T Consensus 1 M~~~~~~k~v-lVT-Gas~g--IG~~ia~~l~~~G~~V~~~~r 39 (241)
T 1dhr_A 1 MAASGEARRV-LVY-GGRGA--LGSRCVQAFRARNWWVASIDV 39 (241)
T ss_dssp -----CCCEE-EEE-TTTSH--HHHHHHHHHHTTTCEEEEEES
T ss_pred CCccCCCCEE-EEE-CCCcH--HHHHHHHHHHhCCCEEEEEeC
Confidence 5666555454 455 33333 357899999999999998875
No 154
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=48.39 E-value=66 Score=27.67 Aligned_cols=104 Identities=13% Similarity=0.103 Sum_probs=58.4
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCC--CEEEEEeCCc-chhhh--hhcccccccccCCCCeeEEecCCCCCC
Q 011832 3 EKPKSPHILIFPLPCQSHMNSMLKLAEIFGLAG--LKVTFLNSKH-NHERL--IRYTDIHDRFLQYSEFQFKTISDGLPA 77 (476)
Q Consensus 3 ~~~~~~~il~~~~~~~gH~~p~l~La~~L~~rG--H~Vt~~~~~~-~~~~~--~~~~~~~~~~~~~~~i~~~~l~~~~~~ 77 (476)
.|.+++||+++-.+..+- +.+|.+.+.+.+ ++|..+.+.. ..... .+.. ++.+..++. .
T Consensus 4 ~~~~~~ri~vl~SG~gsn---l~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~----------gIp~~~~~~---~ 67 (215)
T 3kcq_A 4 SMKKELRVGVLISGRGSN---LEALAKAFSTEESSVVISCVISNNAEARGLLIAQSY----------GIPTFVVKR---K 67 (215)
T ss_dssp ---CCEEEEEEESSCCHH---HHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHT----------TCCEEECCB---T
T ss_pred CCCCCCEEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHc----------CCCEEEeCc---c
Confidence 456678999888666443 455666665543 7877666532 22211 1111 244444321 0
Q ss_pred CCCCCCCcHHHHHHHHHhhchHHHHHHHhcCCCCceEEEECCCcc-hHHHHHHHcCCCeEEEecC
Q 011832 78 DHPRAGDQLMEMFDSLSLNTRPLLKQMLIDTSPPVSCIIGDACME-FVVDVATELEIPVIHFRAI 141 (476)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~DlvI~D~~~~-~~~~vA~~l~iP~i~~~~~ 141 (476)
.. . .+.+.+.+++. ++|+||+-.+.. -...+-+.+.-.++-++++
T Consensus 68 -~~---~-------------~~~~~~~L~~~--~~Dlivlagy~~IL~~~~l~~~~~~~iNiHpS 113 (215)
T 3kcq_A 68 -PL---D-------------IEHISTVLREH--DVDLVCLAGFMSILPEKFVTDWHHKIINIHPS 113 (215)
T ss_dssp -TB---C-------------HHHHHHHHHHT--TCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred -cC---C-------------hHHHHHHHHHh--CCCEEEEeCCceEeCHHHHhhccCCeEEECcc
Confidence 00 0 14566777777 889999887755 4456666777778887664
No 155
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=47.96 E-value=14 Score=33.33 Aligned_cols=31 Identities=10% Similarity=-0.083 Sum_probs=25.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|||+|+..|..| ..+|..|+++||+|+++..
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r 31 (291)
T 1ks9_A 1 MKITVLGCGALG-----QLWLTALCKQGHEVQGWLR 31 (291)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CeEEEECcCHHH-----HHHHHHHHhCCCCEEEEEc
Confidence 689988766555 4789999999999999875
No 156
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=47.80 E-value=22 Score=24.85 Aligned_cols=50 Identities=16% Similarity=0.223 Sum_probs=34.1
Q ss_pred hhCCceeccCCcccchhhHHHHH--hhhcceeecccccCHHHHHHHHHHHHh
Q 011832 382 VAGVPMICWPYFADQQINSRFVS--EVWNLGLDMKDVCDRNVVEKMVNDLMV 431 (476)
Q Consensus 382 ~~GvP~l~iP~~~DQ~~na~~v~--~~~G~G~~~~~~~~~~~l~~~i~~~l~ 431 (476)
-.|+|+++.--.+.|.+.-..-- .+-|+.-.+-+..++++|.+.+++.|.
T Consensus 49 dngkplvvfvngasqndvnefqneakkegvsydvlkstdpeeltqrvreflk 100 (112)
T 2lnd_A 49 DNGKPLVVFVNGASQNDVNEFQNEAKKEGVSYDVLKSTDPEELTQRVREFLK 100 (112)
T ss_dssp TCCSCEEEEECSCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHHHHHHHHH
T ss_pred hcCCeEEEEecCcccccHHHHHHHHHhcCcchhhhccCCHHHHHHHHHHHHH
Confidence 36888888777777765332211 233666555568899999999998886
No 157
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=47.68 E-value=75 Score=24.77 Aligned_cols=57 Identities=12% Similarity=-0.006 Sum_probs=35.8
Q ss_pred hCCceeccCCcccchhhHHHHHhhhc-ceeecccccCHHHHHHHHHHHHhHhHHHHHHHHHH
Q 011832 383 AGVPMICWPYFADQQINSRFVSEVWN-LGLDMKDVCDRNVVEKMVNDLMVERKEEFMRAADR 443 (476)
Q Consensus 383 ~GvP~l~iP~~~DQ~~na~~v~~~~G-~G~~~~~~~~~~~l~~~i~~~l~~~~~~y~~~a~~ 443 (476)
..+|++++--..|.. ..... -+.| +--.+.+.++.+.|.++|++++.. ..+++..++
T Consensus 78 ~~~~ii~ls~~~~~~-~~~~~-~~~g~~~~~l~kP~~~~~L~~~i~~~~~~--~~~~~~~~~ 135 (154)
T 2rjn_A 78 PDIERVVISGYADAQ-ATIDA-VNRGKISRFLLKPWEDEDVFKVVEKGLQL--AFLREENLR 135 (154)
T ss_dssp TTSEEEEEECGGGHH-HHHHH-HHTTCCSEEEESSCCHHHHHHHHHHHHHH--HHHHHHTTS
T ss_pred CCCcEEEEecCCCHH-HHHHH-HhccchheeeeCCCCHHHHHHHHHHHHHH--HHHHHHHHH
Confidence 478888775554433 33333 2335 655666779999999999999874 344443333
No 158
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=47.57 E-value=33 Score=30.39 Aligned_cols=39 Identities=18% Similarity=0.135 Sum_probs=26.0
Q ss_pred CCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 1 MEEKPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 1 ~~~~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|+.|.+.+++ +++ |+.|- =-.++++.|+++||+|+++.-
T Consensus 1 M~~m~~~k~v-lVT-Gas~g--IG~~ia~~l~~~G~~V~~~~r 39 (267)
T 2gdz_A 1 MAHMVNGKVA-LVT-GAAQG--IGRAFAEALLLKGAKVALVDW 39 (267)
T ss_dssp -CCCCTTCEE-EEE-TTTSH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCcccCCCEE-EEE-CCCCc--HHHHHHHHHHHCCCEEEEEEC
Confidence 6666655444 444 33332 346899999999999998875
No 159
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=47.55 E-value=1.7e+02 Score=26.72 Aligned_cols=103 Identities=16% Similarity=0.151 Sum_probs=55.4
Q ss_pred CEEEEEcCCCcc---C--HHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhcccccccccCCCCeeEEecCCCCCCCCCCC
Q 011832 8 PHILIFPLPCQS---H--MNSMLKLAEIFGLAGLKVTFLNSKHNHERLIRYTDIHDRFLQYSEFQFKTISDGLPADHPRA 82 (476)
Q Consensus 8 ~~il~~~~~~~g---H--~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~ 82 (476)
..|++.|....+ . ..-+.++++.|.++|++|.+++.+...+..++... ............+. .
T Consensus 181 ~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~e~~~~~~i~~---~~~~~~~~~~~~l~---------g 248 (348)
T 1psw_A 181 PMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILA---ALNTEQQAWCRNLA---------G 248 (348)
T ss_dssp CEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGGHHHHHHHHT---TSCHHHHTTEEECT---------T
T ss_pred cEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChhhHHHHHHHHH---hhhhccccceEecc---------C
Confidence 456676644222 2 23689999999999999988776433222111110 00000000011110 0
Q ss_pred CCcHHHHHHHHHhhchHHHHHHHhcCCCCceEEEECCCcchHHHHHHHcCCCeEEEec
Q 011832 83 GDQLMEMFDSLSLNTRPLLKQMLIDTSPPVSCIIGDACMEFVVDVATELEIPVIHFRA 140 (476)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~DlvI~D~~~~~~~~vA~~l~iP~i~~~~ 140 (476)
..+ ..++.+++... |++|+-. ...+.+|..+|+|+|.++.
T Consensus 249 ~~s------------l~e~~ali~~a----~l~I~~D--sg~~HlAaa~g~P~v~lfg 288 (348)
T 1psw_A 249 ETQ------------LDQAVILIAAC----KAIVTND--SGLMHVAAALNRPLVALYG 288 (348)
T ss_dssp TSC------------HHHHHHHHHTS----SEEEEES--SHHHHHHHHTTCCEEEEES
T ss_pred cCC------------HHHHHHHHHhC----CEEEecC--CHHHHHHHHcCCCEEEEEC
Confidence 011 23345666654 8988643 4557789999999999864
No 160
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=47.29 E-value=25 Score=33.40 Aligned_cols=38 Identities=16% Similarity=0.166 Sum_probs=31.6
Q ss_pred CEEEEEcC-CCccCHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 011832 8 PHILIFPL-PCQSHMNSMLKLAEIFGLAGLKVTFLNSKHN 46 (476)
Q Consensus 8 ~~il~~~~-~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~ 46 (476)
|+|++++. ++.|-..-..++|..|+++|++|.++.. +.
T Consensus 2 ~~i~~~~gkGG~GKTt~a~~la~~la~~g~~vllvd~-~~ 40 (374)
T 3igf_A 2 ALILTFLGKSGVARTKIAIAAAKLLASQGKRVLLAGL-AE 40 (374)
T ss_dssp CEEEEEECSBHHHHHHHHHHHHHHHHHTTCCEEEEEC-SC
T ss_pred cEEEEEeCCCCCcHHHHHHHHHHHHHHCCCCeEEEeC-CC
Confidence 57777764 4568888899999999999999999998 43
No 161
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=47.06 E-value=16 Score=33.08 Aligned_cols=31 Identities=3% Similarity=0.006 Sum_probs=24.6
Q ss_pred CEEEEEcC-CCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 8 PHILIFPL-PCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 8 ~~il~~~~-~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|||+|+.. |..| ..+|+.|.++||+|+++..
T Consensus 12 m~I~iIG~tG~mG-----~~la~~l~~~g~~V~~~~r 43 (286)
T 3c24_A 12 KTVAILGAGGKMG-----ARITRKIHDSAHHLAAIEI 43 (286)
T ss_dssp CEEEEETTTSHHH-----HHHHHHHHHSSSEEEEECC
T ss_pred CEEEEECCCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 69999976 5544 5678899999999997764
No 162
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=46.94 E-value=81 Score=28.77 Aligned_cols=40 Identities=5% Similarity=-0.018 Sum_probs=27.5
Q ss_pred HHHHHHhcCCCCceEEEECCCcc-hHHHHHHHcCCCeEEEecC
Q 011832 100 LLKQMLIDTSPPVSCIIGDACME-FVVDVATELEIPVIHFRAI 141 (476)
Q Consensus 100 ~l~~ll~~~~~~~DlvI~D~~~~-~~~~vA~~l~iP~i~~~~~ 141 (476)
.+.+.+++. ++|++|+=.+.. ....+-......++-++++
T Consensus 66 ~~~~~l~~~--~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpS 106 (305)
T 2bln_A 66 LWVERIAQL--SPDVIFSFYYRHLIYDEILQLAPAGAFNLHGS 106 (305)
T ss_dssp HHHHHHHHT--CCSEEEEESCCSCCCHHHHTTCTTCEEEEESS
T ss_pred HHHHHHHhc--CCCEEEEeccccccCHHHHhcCcCCEEEecCC
Confidence 345566666 889999876644 4455666666778888776
No 163
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=46.81 E-value=19 Score=30.82 Aligned_cols=32 Identities=9% Similarity=0.027 Sum_probs=24.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|||+|+ |+.|.+- ..|++.|+++||+|+.++-
T Consensus 1 MkilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R 32 (224)
T 3h2s_A 1 MKIAVL--GATGRAG--SAIVAEARRRGHEVLAVVR 32 (224)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEE--cCCCHHH--HHHHHHHHHCCCEEEEEEe
Confidence 676665 4555543 6889999999999999985
No 164
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=46.69 E-value=34 Score=28.84 Aligned_cols=41 Identities=12% Similarity=0.161 Sum_probs=33.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchhhh
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHERL 50 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~ 50 (476)
+||++.-.|+.|-+ -...+.+.|.++|++|.++.++. ..++
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~-A~~~ 42 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRN-AKVV 42 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHH-HHHH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChh-HHHH
Confidence 48999888888855 57999999999999999999954 3443
No 165
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=46.63 E-value=26 Score=32.53 Aligned_cols=73 Identities=10% Similarity=0.105 Sum_probs=50.8
Q ss_pred cCHHHHHHHHHHHHhcCCceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccChHHHhhcccccccccccCchhHHHHH
Q 011832 302 LKREQLIEFWHGLVDSKQRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQEEVLAHQAVAGFLTHSGWNSTLESI 381 (476)
Q Consensus 302 ~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HGG~~s~~eal 381 (476)
.+.+..+.+.+++..-..+.||...++. +-.++.++++...|-.+++. ||-+.-...++-++
T Consensus 62 ~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~----------------g~~rlL~~lD~~~i~~~PK~--~~GySDiTaL~~al 123 (331)
T 4e5s_A 62 SISSRVQDLHEAFRDPNVKAILTTLGGY----------------NSNGLLKYLDYDLIRENPKF--FCGYSDITALNNAI 123 (331)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCS----------------CGGGGGGGCCHHHHHTSCCE--EEECGGGHHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEccccc----------------cHHHHHhhcChhHHHhCCeE--EEEecchHHHHHHH
Confidence 3456677788888887788899988762 22334455555556567777 88888888888777
Q ss_pred h--hCCceeccCC
Q 011832 382 V--AGVPMICWPY 392 (476)
Q Consensus 382 ~--~GvP~l~iP~ 392 (476)
+ .|++.+-=|.
T Consensus 124 ~~~~G~~t~hGp~ 136 (331)
T 4e5s_A 124 YTKTGLVTYSGPH 136 (331)
T ss_dssp HHHHCBCEEECCC
T ss_pred HHhhCCcEEEccc
Confidence 6 4777766665
No 166
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=46.61 E-value=15 Score=33.18 Aligned_cols=52 Identities=12% Similarity=0.031 Sum_probs=37.3
Q ss_pred ccccccccccCchhHHHHHhh------CCceeccCCcccchhhHHHHHhhhcceeecccccCHHHHHHHHHHHHhH
Q 011832 363 QAVAGFLTHSGWNSTLESIVA------GVPMICWPYFADQQINSRFVSEVWNLGLDMKDVCDRNVVEKMVNDLMVE 432 (476)
Q Consensus 363 ~~~~~~I~HGG~~s~~eal~~------GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~l~~~i~~~l~~ 432 (476)
+++ +|.=||=||+.+++.. ++|++++|.. . +| .+. .+.++++.+++.++++.
T Consensus 36 ~D~--vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G-----------~-lg---fl~-~~~~~~~~~~l~~l~~g 93 (272)
T 2i2c_A 36 PEI--VISIGGDGTFLSAFHQYEERLDEIAFIGIHTG-----------H-LG---FYA-DWRPAEADKLVKLLAKG 93 (272)
T ss_dssp CSE--EEEEESHHHHHHHHHHTGGGTTTCEEEEEESS-----------S-CC---SSC-CBCGGGHHHHHHHHHTT
T ss_pred CCE--EEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCC-----------C-CC---cCC-cCCHHHHHHHHHHHHcC
Confidence 566 9999999999999775 8999999751 0 12 111 34577788888877763
No 167
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=46.25 E-value=16 Score=33.48 Aligned_cols=34 Identities=18% Similarity=0.109 Sum_probs=27.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
.+.|||.|+..|..| ..+|+.|+++||+|+++..
T Consensus 19 ~~m~~I~iIG~G~mG-----~~~A~~l~~~G~~V~~~dr 52 (310)
T 3doj_A 19 SHMMEVGFLGLGIMG-----KAMSMNLLKNGFKVTVWNR 52 (310)
T ss_dssp CCSCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred ccCCEEEEECccHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 445899999766544 6789999999999998865
No 168
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=46.23 E-value=81 Score=23.97 Aligned_cols=107 Identities=8% Similarity=-0.022 Sum_probs=60.9
Q ss_pred cCHHHHHHHHHHHHhcCCceEEEECCCCCCCchhhH-HHHHHhhcCCceEeecc-ChHHHhhcccccccccccCchhHHH
Q 011832 302 LKREQLIEFWHGLVDSKQRFLWVIRPDSVIGEGDAL-AELVEGTKERGLLVSWV-PQEEVLAHQAVAGFLTHSGWNSTLE 379 (476)
Q Consensus 302 ~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~l-~~~~~~~~~nv~~~~~~-pq~~lL~~~~~~~~I~HGG~~s~~e 379 (476)
.++.....+...++..+..+....... +. ..+.. .+..+.+.++- |.. .| -.+.+
T Consensus 14 d~~~~~~~l~~~l~~~g~~v~~~~~~~-------~a~~~l~~-~~~dlvi~d~~l~~~--------------~g-~~~~~ 70 (140)
T 3grc_A 14 DDPDIARLLNLMLEKGGFDSDMVHSAA-------QALEQVAR-RPYAAMTVDLNLPDQ--------------DG-VSLIR 70 (140)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSHH-------HHHHHHHH-SCCSEEEECSCCSSS--------------CH-HHHHH
T ss_pred CCHHHHHHHHHHHHHCCCeEEEECCHH-------HHHHHHHh-CCCCEEEEeCCCCCC--------------CH-HHHHH
Confidence 456666667778888887754443211 22 22222 23334444331 211 11 12333
Q ss_pred HHh-----hCCceeccCCcccchhhHHHHHhhhcceeecccccCHHHHHHHHHHHHhH
Q 011832 380 SIV-----AGVPMICWPYFADQQINSRFVSEVWNLGLDMKDVCDRNVVEKMVNDLMVE 432 (476)
Q Consensus 380 al~-----~GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~l~~~i~~~l~~ 432 (476)
.+. ..+|++++--..|...-.... .+.|+--.+.+.++.++|.++|+++++.
T Consensus 71 ~l~~~~~~~~~~ii~~s~~~~~~~~~~~~-~~~g~~~~l~kP~~~~~l~~~i~~~l~~ 127 (140)
T 3grc_A 71 ALRRDSRTRDLAIVVVSANAREGELEFNS-QPLAVSTWLEKPIDENLLILSLHRAIDN 127 (140)
T ss_dssp HHHTSGGGTTCEEEEECTTHHHHHHHHCC-TTTCCCEEECSSCCHHHHHHHHHHHHHH
T ss_pred HHHhCcccCCCCEEEEecCCChHHHHHHh-hhcCCCEEEeCCCCHHHHHHHHHHHHHh
Confidence 333 478888876655544333234 4457766777789999999999999984
No 169
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=45.80 E-value=21 Score=29.98 Aligned_cols=36 Identities=17% Similarity=0.216 Sum_probs=26.3
Q ss_pred CCEEEEEcCCCccCHHHHH-HHHHHHHhCCCEEEEEeC
Q 011832 7 SPHILIFPLPCQSHMNSML-KLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l-~La~~L~~rGH~Vt~~~~ 43 (476)
.|||+++-.. .|+..-+. .+++.|.+.|++|.++.-
T Consensus 4 mmkilii~~S-~g~T~~la~~i~~~l~~~g~~v~~~~l 40 (199)
T 2zki_A 4 KPNILVLFYG-YGSIVELAKEIGKGAEEAGAEVKIRRV 40 (199)
T ss_dssp CCEEEEEECC-SSHHHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred CcEEEEEEeC-ccHHHHHHHHHHHHHHhCCCEEEEEeh
Confidence 4789888766 88765544 456667778999998865
No 170
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=45.80 E-value=17 Score=31.23 Aligned_cols=33 Identities=27% Similarity=0.362 Sum_probs=25.2
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
+.|||+|+..|..| ..+|..|+++||+|+++..
T Consensus 18 ~~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~ 50 (209)
T 2raf_A 18 QGMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGS 50 (209)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECT
T ss_pred CCCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcC
Confidence 46899998765545 5788999999999998854
No 171
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=45.52 E-value=24 Score=30.52 Aligned_cols=36 Identities=8% Similarity=0.045 Sum_probs=25.8
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
.+.|+|+|.. +.|.+ -..+++.|+++||+|+.++-.
T Consensus 19 l~~~~ilVtG--atG~i--G~~l~~~L~~~G~~V~~~~R~ 54 (236)
T 3e8x_A 19 FQGMRVLVVG--ANGKV--ARYLLSELKNKGHEPVAMVRN 54 (236)
T ss_dssp --CCEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred cCCCeEEEEC--CCChH--HHHHHHHHHhCCCeEEEEECC
Confidence 3467877764 44544 357899999999999999863
No 172
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=45.42 E-value=14 Score=34.06 Aligned_cols=24 Identities=33% Similarity=0.282 Sum_probs=20.5
Q ss_pred HHHHHHHHHHhCCCEEEEEeCCcc
Q 011832 23 SMLKLAEIFGLAGLKVTFLNSKHN 46 (476)
Q Consensus 23 p~l~La~~L~~rGH~Vt~~~~~~~ 46 (476)
...++|+.+.++|++||+++.+..
T Consensus 67 mG~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 67 RGATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp HHHHHHHHHHHTTCEEEEEEETTS
T ss_pred HHHHHHHHHHHCCCEEEEEecCCC
Confidence 567899999999999999998543
No 173
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=45.26 E-value=39 Score=28.87 Aligned_cols=48 Identities=8% Similarity=-0.138 Sum_probs=34.2
Q ss_pred hhhhhhhcCCCCCeEEEEEeccccccCHHHHHHHHHHHHhcCCceEEE
Q 011832 277 RSCIEWLGKQPVRSVLYVSFGSITLLKREQLIEFWHGLVDSKQRFLWV 324 (476)
Q Consensus 277 ~~~~~~l~~~~~~~~I~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~ 324 (476)
+-+.+|+.....+.++||..++......+.+..+.++++.+|..+.+.
T Consensus 16 ~~~~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~ 63 (206)
T 3l4e_A 16 PLFTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEEL 63 (206)
T ss_dssp HHHHHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 445667654445679999888765444567788999999999876554
No 174
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=45.13 E-value=17 Score=32.79 Aligned_cols=34 Identities=12% Similarity=0.102 Sum_probs=26.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
++.+||+|+..|..| ..+|..|+++||+|+++..
T Consensus 2 m~~~kV~VIGaG~mG-----~~iA~~la~~G~~V~l~d~ 35 (283)
T 4e12_A 2 TGITNVTVLGTGVLG-----SQIAFQTAFHGFAVTAYDI 35 (283)
T ss_dssp CSCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCCEEEEECCCHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 345689999655444 5789999999999999865
No 175
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=44.99 E-value=21 Score=30.65 Aligned_cols=41 Identities=15% Similarity=0.183 Sum_probs=31.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHh-CCCEEEEEeCCcc
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGL-AGLKVTFLNSKHN 46 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~-rGH~Vt~~~~~~~ 46 (476)
.+++||++.-.|+.+=+ -...+.+.|.+ +|++|.++.++.-
T Consensus 17 l~~k~IllgvTGsiaa~-k~~~lv~~L~~~~g~~V~vv~T~~A 58 (206)
T 1qzu_A 17 ERKFHVLVGVTGSVAAL-KLPLLVSKLLDIPGLEVAVVTTERA 58 (206)
T ss_dssp CSSEEEEEEECSSGGGG-THHHHHHHHC---CEEEEEEECTGG
T ss_pred cCCCEEEEEEeChHHHH-HHHHHHHHHhcccCCEEEEEECHhH
Confidence 45678988888887755 45899999999 8999999999543
No 176
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=44.90 E-value=9.5 Score=36.03 Aligned_cols=30 Identities=13% Similarity=0.108 Sum_probs=25.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 9 HILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 9 ~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
||+|+..|..| ..+|..|+++||+|+++..
T Consensus 17 kI~iIG~G~mG-----~~la~~L~~~G~~V~~~~r 46 (366)
T 1evy_A 17 KAVVFGSGAFG-----TALAMVLSKKCREVCVWHM 46 (366)
T ss_dssp EEEEECCSHHH-----HHHHHHHTTTEEEEEEECS
T ss_pred eEEEECCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 89999877665 4689999999999999875
No 177
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=44.76 E-value=30 Score=30.08 Aligned_cols=41 Identities=17% Similarity=0.147 Sum_probs=28.9
Q ss_pred HHHHHHHhcCCCCceEEEECCCcch-------HHHHHHHcCCCeEEEe
Q 011832 99 PLLKQMLIDTSPPVSCIIGDACMEF-------VVDVATELEIPVIHFR 139 (476)
Q Consensus 99 ~~l~~ll~~~~~~~DlvI~D~~~~~-------~~~vA~~l~iP~i~~~ 139 (476)
+.+.+.++....+||+|++|..... |..+...+++|+|.+.
T Consensus 91 P~~l~al~~L~~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVA 138 (225)
T 2w36_A 91 PLFLKAWEKLRTKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVA 138 (225)
T ss_dssp HHHHHHHTTCCSCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEE
T ss_pred HHHHHHHHhcCCCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEE
Confidence 4455566655458999999987764 3345556689999984
No 178
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=44.74 E-value=1e+02 Score=23.45 Aligned_cols=106 Identities=11% Similarity=0.039 Sum_probs=61.3
Q ss_pred cCHHHHHHHHHHHHhcCCceEEEECCCCCCCchhhH-HHHHHhhcCCceEeeccChHHHhhcccccccccccCchhHHHH
Q 011832 302 LKREQLIEFWHGLVDSKQRFLWVIRPDSVIGEGDAL-AELVEGTKERGLLVSWVPQEEVLAHQAVAGFLTHSGWNSTLES 380 (476)
Q Consensus 302 ~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~l-~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HGG~~s~~ea 380 (476)
.++.....+...++..++.+.+..... .. ..+. ..+..+.+.++.|...-+ .+.+.
T Consensus 12 d~~~~~~~l~~~L~~~g~~v~~~~~~~-------~a~~~l~-~~~~dlvi~d~~~~~~g~---------------~~~~~ 68 (142)
T 2qxy_A 12 ESRITFLAVKNALEKDGFNVIWAKNEQ-------EAFTFLR-REKIDLVFVDVFEGEESL---------------NLIRR 68 (142)
T ss_dssp SCHHHHHHHHHHHGGGTCEEEEESSHH-------HHHHHHT-TSCCSEEEEECTTTHHHH---------------HHHHH
T ss_pred CCHHHHHHHHHHHHhCCCEEEEECCHH-------HHHHHHh-ccCCCEEEEeCCCCCcHH---------------HHHHH
Confidence 456666778888888888876443211 11 2221 123345555543322111 11222
Q ss_pred H---hhCCceeccCCcccchhhHHHHHhhhcceeecccccCHHHHHHHHHHHHhH
Q 011832 381 I---VAGVPMICWPYFADQQINSRFVSEVWNLGLDMKDVCDRNVVEKMVNDLMVE 432 (476)
Q Consensus 381 l---~~GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~l~~~i~~~l~~ 432 (476)
+ ...+|++++--..|. ...... .+.|+--.+.+.++.++|.++|++++..
T Consensus 69 l~~~~~~~pii~ls~~~~~-~~~~~~-~~~g~~~~l~kP~~~~~l~~~i~~~~~~ 121 (142)
T 2qxy_A 69 IREEFPDTKVAVLSAYVDK-DLIINS-VKAGAVDYILKPFRLDYLLERVKKIISS 121 (142)
T ss_dssp HHHHCTTCEEEEEESCCCH-HHHHHH-HHHTCSCEEESSCCHHHHHHHHHHHHHC
T ss_pred HHHHCCCCCEEEEECCCCH-HHHHHH-HHCCcceeEeCCCCHHHHHHHHHHHHhh
Confidence 2 346888887655443 344444 4458776777789999999999999873
No 179
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=44.02 E-value=8.7 Score=33.19 Aligned_cols=32 Identities=16% Similarity=0.091 Sum_probs=25.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
|||+++.. |.+ -..+|+.|.++||+|+++...
T Consensus 1 M~iiIiG~---G~~--G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 1 MKVIIIGG---ETT--AYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CCEEEECC---HHH--HHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECC---CHH--HHHHHHHHHhCCCeEEEEECC
Confidence 67888864 332 468999999999999999863
No 180
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=43.63 E-value=38 Score=28.14 Aligned_cols=32 Identities=28% Similarity=0.215 Sum_probs=24.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|+|+++ |+.|-+ -..+++.|.++||+|+.++-
T Consensus 4 ~~ilVt--GatG~i--G~~l~~~l~~~g~~V~~~~r 35 (206)
T 1hdo_A 4 KKIAIF--GATGQT--GLTTLAQAVQAGYEVTVLVR 35 (206)
T ss_dssp CEEEEE--STTSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEE--cCCcHH--HHHHHHHHHHCCCeEEEEEe
Confidence 677776 444543 46889999999999999886
No 181
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=43.15 E-value=24 Score=26.64 Aligned_cols=38 Identities=13% Similarity=-0.001 Sum_probs=29.6
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
+.|||+++|..+.|+-.-...+-+.+.++|.++.+-..
T Consensus 3 ~~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~~~ 40 (109)
T 2l2q_A 3 GSMNILLVCGAGMSTSMLVQRIEKYAKSKNINATIEAI 40 (109)
T ss_dssp CCEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEEEE
T ss_pred CceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 45899999988887776667888888889988765443
No 182
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=43.13 E-value=23 Score=32.10 Aligned_cols=34 Identities=15% Similarity=0.099 Sum_probs=24.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
+|+|+++. +.|.+- ..+++.|.++||+|+.++-.
T Consensus 4 ~~~ilVtG--atG~iG--~~l~~~L~~~g~~V~~l~R~ 37 (308)
T 1qyc_A 4 RSRILLIG--ATGYIG--RHVAKASLDLGHPTFLLVRE 37 (308)
T ss_dssp CCCEEEES--TTSTTH--HHHHHHHHHTTCCEEEECCC
T ss_pred CCEEEEEc--CCcHHH--HHHHHHHHhCCCCEEEEECC
Confidence 45676654 445543 47889999999999988754
No 183
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=43.02 E-value=38 Score=31.77 Aligned_cols=26 Identities=23% Similarity=0.482 Sum_probs=20.6
Q ss_pred cccccccccccCchhH---HHHHhhCCceec
Q 011832 362 HQAVAGFLTHSGWNST---LESIVAGVPMIC 389 (476)
Q Consensus 362 ~~~~~~~I~HGG~~s~---~eal~~GvP~l~ 389 (476)
++|+ +|++||.-+. ..|...|+|.++
T Consensus 92 ~PDv--Vi~~g~~~s~p~~laA~~~~iP~vi 120 (365)
T 3s2u_A 92 RPVC--VLGLGGYVTGPGGLAARLNGVPLVI 120 (365)
T ss_dssp CCSE--EEECSSSTHHHHHHHHHHTTCCEEE
T ss_pred CCCE--EEEcCCcchHHHHHHHHHcCCCEEE
Confidence 5677 9999998764 567788999986
No 184
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=42.93 E-value=28 Score=31.92 Aligned_cols=37 Identities=16% Similarity=0.137 Sum_probs=26.9
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 3 EKPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 3 ~~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
...+.|+|+|. |+.|.+- ..|++.|+++||+|+.+.-
T Consensus 7 ~~~~~~~vlVT--GatG~iG--~~l~~~L~~~g~~V~~~~r 43 (342)
T 1y1p_A 7 VLPEGSLVLVT--GANGFVA--SHVVEQLLEHGYKVRGTAR 43 (342)
T ss_dssp SSCTTCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred cCCCCCEEEEE--CCccHHH--HHHHHHHHHCCCEEEEEeC
Confidence 34556777766 4555443 5789999999999998875
No 185
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=42.87 E-value=14 Score=34.35 Aligned_cols=36 Identities=8% Similarity=0.180 Sum_probs=26.5
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCC-EEEEEeCC
Q 011832 4 KPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGL-KVTFLNSK 44 (476)
Q Consensus 4 ~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH-~Vt~~~~~ 44 (476)
.+++|||.++.. |++--. +|..|+.+|| +|+++-..
T Consensus 6 ~~~~~kI~VIGa---G~vG~~--lA~~la~~g~~~V~L~D~~ 42 (331)
T 1pzg_A 6 VQRRKKVAMIGS---GMIGGT--MGYLCALRELADVVLYDVV 42 (331)
T ss_dssp CSCCCEEEEECC---SHHHHH--HHHHHHHHTCCEEEEECSS
T ss_pred CCCCCEEEEECC---CHHHHH--HHHHHHhCCCCeEEEEECC
Confidence 345689999865 444333 8899999999 98887764
No 186
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=42.62 E-value=26 Score=30.56 Aligned_cols=37 Identities=14% Similarity=0.026 Sum_probs=30.0
Q ss_pred CCCEEEEEcCC--CccCHHHHHHHHHHHHhCCCEEEEEe
Q 011832 6 KSPHILIFPLP--CQSHMNSMLKLAEIFGLAGLKVTFLN 42 (476)
Q Consensus 6 ~~~~il~~~~~--~~gH~~p~l~La~~L~~rGH~Vt~~~ 42 (476)
++||.+|++.. +.|-..-...|++.|.++|++|.++=
T Consensus 2 ~~mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~K 40 (228)
T 3of5_A 2 NAMKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLK 40 (228)
T ss_dssp TTCEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCCcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEec
Confidence 46776666643 55899999999999999999999974
No 187
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=42.00 E-value=17 Score=35.26 Aligned_cols=36 Identities=14% Similarity=0.011 Sum_probs=25.2
Q ss_pred CCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 2 EEKPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 2 ~~~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
....+.|||.|+..|..| +.+|..|++ ||+|+.+..
T Consensus 31 ~r~~~~mkIaVIGlG~mG-----~~lA~~La~-G~~V~~~D~ 66 (432)
T 3pid_A 31 GRGSEFMKITISGTGYVG-----LSNGVLIAQ-NHEVVALDI 66 (432)
T ss_dssp ----CCCEEEEECCSHHH-----HHHHHHHHT-TSEEEEECS
T ss_pred ccccCCCEEEEECcCHHH-----HHHHHHHHc-CCeEEEEec
Confidence 345667899999766545 467778887 999999875
No 188
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=41.80 E-value=91 Score=23.69 Aligned_cols=49 Identities=4% Similarity=-0.117 Sum_probs=32.1
Q ss_pred hCCceeccCCcccchhhHHHHHhhhcceeecccccCHHHHHHHHHHHHhH
Q 011832 383 AGVPMICWPYFADQQINSRFVSEVWNLGLDMKDVCDRNVVEKMVNDLMVE 432 (476)
Q Consensus 383 ~GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~l~~~i~~~l~~ 432 (476)
..+|++++--..|.......+ +..|+--.+.+.++.++|..+|++++..
T Consensus 71 ~~~~ii~~s~~~~~~~~~~~~-~~~ga~~~l~KP~~~~~L~~~i~~~~~~ 119 (139)
T 2jk1_A 71 PETVRIIITGYTDSASMMAAI-NDAGIHQFLTKPWHPEQLLSSARNAARM 119 (139)
T ss_dssp TTSEEEEEESCTTCHHHHHHH-HHTTCCEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHH-HhhchhhhccCCCCHHHHHHHHHHHHHH
Confidence 457777765554443333333 4334555666789999999999999873
No 189
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=41.76 E-value=1.4e+02 Score=24.10 Aligned_cols=100 Identities=13% Similarity=0.100 Sum_probs=64.2
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCcchhhhhhcccccccccCCCCeeEEecCCCCCCCCCC
Q 011832 4 KPKSPHILIFPLPCQSHMNSMLKLAEIFGLA--GLKVTFLNSKHNHERLIRYTDIHDRFLQYSEFQFKTISDGLPADHPR 81 (476)
Q Consensus 4 ~~~~~~il~~~~~~~gH~~p~l~La~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~ 81 (476)
|++.++|++.. ...+=.-++.+|+.|.+. ||++. .+......+.+..+ +....+. ..+.+
T Consensus 8 ~p~~g~V~lsv--~D~dK~~~v~~ak~~~~ll~Gf~l~--AT~gTa~~L~e~~G----------l~v~~v~-k~~eG--- 69 (152)
T 1b93_A 8 LPARKHIALVA--HDHCKQMLMSWVERHQPLLEQHVLY--ATGTTGNLISRATG----------MNVNAML-SGPMG--- 69 (152)
T ss_dssp ECSSCEEEEEE--CGGGHHHHHHHHHHTHHHHTTSEEE--EETTHHHHHHHHHC----------CCCEEEC-CGGGT---
T ss_pred CCCCCEEEEEE--ehhhHHHHHHHHHHHHHHhCCCEEE--EccHHHHHHHHHhC----------ceeEEEE-ecCCC---
Confidence 45567777664 456667799999999999 99654 44456666666333 2222221 11110
Q ss_pred CCCcHHHHHHHHHhhchHHHHHHHhcCCCCceEEEECCC--cc-h-------HHHHHHHcCCCeEEE
Q 011832 82 AGDQLMEMFDSLSLNTRPLLKQMLIDTSPPVSCIIGDAC--ME-F-------VVDVATELEIPVIHF 138 (476)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~DlvI~D~~--~~-~-------~~~vA~~l~iP~i~~ 138 (476)
.++++.+++++. +.|+||...- .. . -.-+|-..+||++.-
T Consensus 70 ---------------G~p~I~d~I~~g--eIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~ 119 (152)
T 1b93_A 70 ---------------GDQQVGALISEG--KIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVATN 119 (152)
T ss_dssp ---------------HHHHHHHHHHTT--CCCEEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEESS
T ss_pred ---------------CCchHHHHHHCC--CccEEEEcCCcccCCcccccHHHHHHHHHHcCCCEEeC
Confidence 245688899887 8999996543 22 2 234788999999874
No 190
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=41.70 E-value=43 Score=26.62 Aligned_cols=38 Identities=16% Similarity=0.168 Sum_probs=27.7
Q ss_pred CCCEEEEEcC-CCccCHH--HHHHHHHHHHhCCCEE-EEEeC
Q 011832 6 KSPHILIFPL-PCQSHMN--SMLKLAEIFGLAGLKV-TFLNS 43 (476)
Q Consensus 6 ~~~~il~~~~-~~~gH~~--p~l~La~~L~~rGH~V-t~~~~ 43 (476)
-.||++|+-. +-+|+-. -.+.+|+.+.+.||+| .++-.
T Consensus 11 ~~~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~ 52 (140)
T 2d1p_A 11 GSMRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFY 52 (140)
T ss_dssp CCCEEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CceEEEEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEe
Confidence 3588866654 4455544 4688999999999999 77776
No 191
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=41.70 E-value=16 Score=28.94 Aligned_cols=33 Identities=12% Similarity=0.139 Sum_probs=26.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
+.||+++.+|..| ..+|+.|.++||+|+++...
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECC
Confidence 4689988765444 57899999999999999974
No 192
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=41.66 E-value=7.8 Score=38.11 Aligned_cols=40 Identities=20% Similarity=0.177 Sum_probs=31.2
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhh
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHERLIR 52 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~ 52 (476)
..|||+++..|-.| ..||+.|.+.||+||++-. +.+.+++
T Consensus 2 ~~M~iiI~G~G~vG-----~~la~~L~~~~~~v~vId~--d~~~~~~ 41 (461)
T 4g65_A 2 NAMKIIILGAGQVG-----GTLAENLVGENNDITIVDK--DGDRLRE 41 (461)
T ss_dssp CCEEEEEECCSHHH-----HHHHHHTCSTTEEEEEEES--CHHHHHH
T ss_pred CcCEEEEECCCHHH-----HHHHHHHHHCCCCEEEEEC--CHHHHHH
Confidence 47999999877655 4699999999999999986 3444433
No 193
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=41.05 E-value=24 Score=32.47 Aligned_cols=33 Identities=15% Similarity=0.137 Sum_probs=27.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKH 45 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~ 45 (476)
+|||+++..+ ....+++++.++||+|.++.+..
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~~ 34 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKDEGFETIAFGSSK 34 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHHTTCCEEEESCGG
T ss_pred ceEEEEECCh------hHHHHHHHHHhCCCEEEEEECCC
Confidence 5899999866 56789999999999999988743
No 194
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=40.90 E-value=40 Score=30.62 Aligned_cols=35 Identities=6% Similarity=0.011 Sum_probs=27.4
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEe
Q 011832 3 EKPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLN 42 (476)
Q Consensus 3 ~~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~ 42 (476)
.|++.|||+++... .......+.|.+.||+|.+..
T Consensus 3 ~~~~~mki~v~~~~-----~~~~~~~~~L~~~g~~v~~~~ 37 (300)
T 2rir_A 3 AMLTGLKIAVIGGD-----ARQLEIIRKLTEQQADIYLVG 37 (300)
T ss_dssp CCCCSCEEEEESBC-----HHHHHHHHHHHHTTCEEEEES
T ss_pred ccccCCEEEEECCC-----HHHHHHHHHHHhCCCEEEEEe
Confidence 46788999998532 356677899999999998764
No 195
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=40.89 E-value=23 Score=30.27 Aligned_cols=33 Identities=12% Similarity=0.108 Sum_probs=24.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
|||+++. +.|-+- ..+++.|+++||+|+.+.-.
T Consensus 1 M~ilItG--atG~iG--~~l~~~L~~~g~~V~~~~R~ 33 (219)
T 3dqp_A 1 MKIFIVG--STGRVG--KSLLKSLSTTDYQIYAGARK 33 (219)
T ss_dssp CEEEEES--TTSHHH--HHHHHHHTTSSCEEEEEESS
T ss_pred CeEEEEC--CCCHHH--HHHHHHHHHCCCEEEEEECC
Confidence 5777664 444443 68899999999999999863
No 196
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=40.67 E-value=53 Score=28.94 Aligned_cols=38 Identities=13% Similarity=0.127 Sum_probs=27.1
Q ss_pred CCEEEEEcCCCccCH-HHHHHHHHHHHhCCCEEEEEeCC
Q 011832 7 SPHILIFPLPCQSHM-NSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 7 ~~~il~~~~~~~gH~-~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
.|||+++-.-+.-++ ..+.+.++.++.-|.+|.+++.+
T Consensus 1 ~mrilvINPnts~~~T~~i~~~~~~~~~p~~~i~~~t~~ 39 (245)
T 3qvl_A 1 SVRIQVINPNTSLAMTETIGAAARAVAAPGTEILAVCPR 39 (245)
T ss_dssp CEEEEEECSSCCHHHHHHHHHHHHHHCCTTEEEEEECCS
T ss_pred CCEEEEEeCCCCHHHHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 378887776665555 56777888877778888877763
No 197
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=40.34 E-value=1.9e+02 Score=26.51 Aligned_cols=109 Identities=13% Similarity=0.138 Sum_probs=59.0
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHHhc-CCceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccChHHHhhccccccc
Q 011832 290 SVLYVSFGSITLLKREQLIEFWHGLVDS-KQRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQEEVLAHQAVAGF 368 (476)
Q Consensus 290 ~~I~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ 368 (476)
.+.+|..|.+. ...+.++... +..++.+...+ .+....+.+... + .-+-...++|..+++.++
T Consensus 6 rvgiiG~G~~g-------~~~~~~l~~~~~~~l~av~d~~-----~~~~~~~a~~~g--~--~~~~~~~~~l~~~~~D~V 69 (344)
T 3euw_A 6 RIALFGAGRIG-------HVHAANIAANPDLELVVIADPF-----IEGAQRLAEANG--A--EAVASPDEVFARDDIDGI 69 (344)
T ss_dssp EEEEECCSHHH-------HHHHHHHHHCTTEEEEEEECSS-----HHHHHHHHHTTT--C--EEESSHHHHTTCSCCCEE
T ss_pred EEEEECCcHHH-------HHHHHHHHhCCCcEEEEEECCC-----HHHHHHHHHHcC--C--ceeCCHHHHhcCCCCCEE
Confidence 46778888764 2355566655 44556565543 112233333222 2 234456788884444335
Q ss_pred ccccCch----hHHHHHhhCCceecc-CCcc--cchhhHHHHHhhhcceeecc
Q 011832 369 LTHSGWN----STLESIVAGVPMICW-PYFA--DQQINSRFVSEVWNLGLDMK 414 (476)
Q Consensus 369 I~HGG~~----s~~eal~~GvP~l~i-P~~~--DQ~~na~~v~~~~G~G~~~~ 414 (476)
+---... -+.+++.+|+++++= |+.. ++-.-...++++.|+-+.+.
T Consensus 70 ~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~ 122 (344)
T 3euw_A 70 VIGSPTSTHVDLITRAVERGIPALCEKPIDLDIEMVRACKEKIGDGASKVMLG 122 (344)
T ss_dssp EECSCGGGHHHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHHGGGGGGEEEC
T ss_pred EEeCCchhhHHHHHHHHHcCCcEEEECCCCCCHHHHHHHHHHHHhcCCeEEec
Confidence 5433333 467889999998873 5543 44444444446667655554
No 198
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=39.84 E-value=24 Score=33.72 Aligned_cols=39 Identities=15% Similarity=0.117 Sum_probs=29.4
Q ss_pred CCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhC-CCEEEEEeCC
Q 011832 1 MEEKPKSPHILIFPLPCQSHMNSMLKLAEIFGLA-GLKVTFLNSK 44 (476)
Q Consensus 1 ~~~~~~~~~il~~~~~~~gH~~p~l~La~~L~~r-GH~Vt~~~~~ 44 (476)
|..|++.++|+|+..| ..-+..|..|+++ |++|+++-..
T Consensus 1 m~~m~~~~~v~IiGaG-----~~Gl~aA~~L~~~~g~~v~v~E~~ 40 (399)
T 1v0j_A 1 MQPMTARFDLFVVGSG-----FFGLTIAERVATQLDKRVLVLERR 40 (399)
T ss_dssp ---CCCSCSEEEECCS-----HHHHHHHHHHHHHSCCCEEEECSS
T ss_pred CCcccccCCEEEECCC-----HHHHHHHHHHHHhCCCCEEEEeCC
Confidence 6667667899998866 3457889999999 9999999764
No 199
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=39.44 E-value=1.3e+02 Score=26.76 Aligned_cols=32 Identities=13% Similarity=0.118 Sum_probs=24.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 9 HILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 9 ~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|+++++.++.| --.++|+.|+++|++|.+..-
T Consensus 26 k~~lVTGas~G---IG~~ia~~la~~G~~V~~~~r 57 (281)
T 3v2h_A 26 KTAVITGSTSG---IGLAIARTLAKAGANIVLNGF 57 (281)
T ss_dssp CEEEEETCSSH---HHHHHHHHHHHTTCEEEEECC
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 56777755443 346899999999999988764
No 200
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=39.41 E-value=26 Score=33.19 Aligned_cols=39 Identities=8% Similarity=0.046 Sum_probs=29.6
Q ss_pred CCCEEEEEcCCCcc-C---HHHHHHHHHHH-HhCCCEEEEEeCC
Q 011832 6 KSPHILIFPLPCQS-H---MNSMLKLAEIF-GLAGLKVTFLNSK 44 (476)
Q Consensus 6 ~~~~il~~~~~~~g-H---~~p~l~La~~L-~~rGH~Vt~~~~~ 44 (476)
++|||+++..+-.+ | +....+++++| .++||+|+.+...
T Consensus 2 ~k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~~ 45 (377)
T 1ehi_A 2 TKKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAIA 45 (377)
T ss_dssp -CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEEC
T ss_pred CCcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEEc
Confidence 47899999855444 3 34578899999 9999999998753
No 201
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=39.37 E-value=61 Score=28.56 Aligned_cols=37 Identities=14% Similarity=0.160 Sum_probs=28.1
Q ss_pred CEEEEEcCCCc----------c-CHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 8 PHILIFPLPCQ----------S-HMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 8 ~~il~~~~~~~----------g-H~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
+||+|+-.... | ...=+..-...|.++|++|+++++.
T Consensus 10 kkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~ 57 (247)
T 3n7t_A 10 RKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASET 57 (247)
T ss_dssp SEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 57888876532 1 2455778888999999999999974
No 202
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=39.36 E-value=42 Score=30.80 Aligned_cols=40 Identities=15% Similarity=0.033 Sum_probs=26.3
Q ss_pred CCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 1 MEEKPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 1 ~~~~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|.++.-+.|.++++.++ |-+ -.++|+.|+++|++|.+..-
T Consensus 1 M~m~~l~~k~vlVTGas-~gI--G~~la~~l~~~G~~Vv~~~r 40 (319)
T 3ioy_A 1 MSLKDFAGRTAFVTGGA-NGV--GIGLVRQLLNQGCKVAIADI 40 (319)
T ss_dssp --CCCCTTCEEEEETTT-STH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCccCCCCCEEEEcCCc-hHH--HHHHHHHHHHCCCEEEEEEC
Confidence 44333344667777444 434 46899999999999988775
No 203
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=39.24 E-value=18 Score=32.86 Aligned_cols=40 Identities=25% Similarity=0.223 Sum_probs=25.4
Q ss_pred CCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 1 MEEKPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 1 ~~~~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
|....++|+|+|+ |+.|.+ -..|++.|.++||+|+.++-.
T Consensus 1 M~~~~~~~~vlVt--GatG~i--G~~l~~~L~~~g~~V~~~~r~ 40 (321)
T 3vps_A 1 MQRNTLKHRILIT--GGAGFI--GGHLARALVASGEEVTVLDDL 40 (321)
T ss_dssp ------CCEEEEE--TTTSHH--HHHHHHHHHHTTCCEEEECCC
T ss_pred CCcccCCCeEEEE--CCCChH--HHHHHHHHHHCCCEEEEEecC
Confidence 3333345677766 455544 357899999999999998753
No 204
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=39.04 E-value=65 Score=29.30 Aligned_cols=80 Identities=11% Similarity=0.067 Sum_probs=47.1
Q ss_pred EEEEEeccccccCHHHHHHHHHHHHhcCCceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccChHHHhhccccccccc
Q 011832 291 VLYVSFGSITLLKREQLIEFWHGLVDSKQRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQEEVLAHQAVAGFLT 370 (476)
Q Consensus 291 ~I~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~ 370 (476)
.|+++--|-.....+.+..+...|+..+..+.+...... + ....+.. ++....++ +|.
T Consensus 12 ~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~--~---~a~~~~~---------------~~~~~~d~--vv~ 69 (304)
T 3s40_A 12 LLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQ--G---DATKYCQ---------------EFASKVDL--IIV 69 (304)
T ss_dssp EEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCST--T---HHHHHHH---------------HHTTTCSE--EEE
T ss_pred EEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccCc--c---hHHHHHH---------------HhhcCCCE--EEE
Confidence 455555333222234556677778877777655543221 1 1111111 11123455 999
Q ss_pred ccCchhHHHHHh------hCCceeccCC
Q 011832 371 HSGWNSTLESIV------AGVPMICWPY 392 (476)
Q Consensus 371 HGG~~s~~eal~------~GvP~l~iP~ 392 (476)
-||=||+.|++. .++|+.++|.
T Consensus 70 ~GGDGTl~~v~~~l~~~~~~~~l~iiP~ 97 (304)
T 3s40_A 70 FGGDGTVFECTNGLAPLEIRPTLAIIPG 97 (304)
T ss_dssp EECHHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred EccchHHHHHHHHHhhCCCCCcEEEecC
Confidence 999999999865 5789999997
No 205
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=38.95 E-value=39 Score=27.93 Aligned_cols=36 Identities=14% Similarity=0.133 Sum_probs=25.8
Q ss_pred CCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCE
Q 011832 1 MEEKPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLK 37 (476)
Q Consensus 1 ~~~~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~ 37 (476)
|....+..+|++++ ++.|++--+...++.|..-|..
T Consensus 1 ~~~~~~~~~V~Iim-gS~SD~~v~~~a~~~L~~~gi~ 36 (174)
T 3lp6_A 1 MTPAGERPRVGVIM-GSDSDWPVMADAAAALAEFDIP 36 (174)
T ss_dssp -----CCCSEEEEE-SCGGGHHHHHHHHHHHHHTTCC
T ss_pred CCCCCCCCeEEEEE-CcHHhHHHHHHHHHHHHHcCCC
Confidence 34445566788887 8999999999999999888853
No 206
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=38.88 E-value=25 Score=31.98 Aligned_cols=32 Identities=16% Similarity=0.114 Sum_probs=26.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
.|||+|+-.|..|. .+|+.|+++||+|+++..
T Consensus 3 m~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~d~ 34 (302)
T 2h78_A 3 MKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDL 34 (302)
T ss_dssp CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCEEEEEeecHHHH-----HHHHHHHhCCCeEEEEcC
Confidence 46899998777764 678999999999998865
No 207
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=38.87 E-value=36 Score=25.63 Aligned_cols=36 Identities=14% Similarity=0.122 Sum_probs=26.5
Q ss_pred EEEEEcCCC---ccCHHHHHHHHHHHHhC-CC-EEEEEeCC
Q 011832 9 HILIFPLPC---QSHMNSMLKLAEIFGLA-GL-KVTFLNSK 44 (476)
Q Consensus 9 ~il~~~~~~---~gH~~p~l~La~~L~~r-GH-~Vt~~~~~ 44 (476)
|++++-..+ .......+.+|..+++. || +|+++-..
T Consensus 3 k~~ii~~~~p~~~~~~~~al~~a~~~~~~~g~~~v~vff~~ 43 (117)
T 1jx7_A 3 KIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMS 43 (117)
T ss_dssp EEEEEECCCTTTCSHHHHHHHHHHHHHHHCTTCEEEEEECG
T ss_pred EEEEEEcCCCCCcHHHHHHHHHHHHHHhcCCCccEEEEEEc
Confidence 565554332 35566789999999999 99 99998874
No 208
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=38.33 E-value=32 Score=31.51 Aligned_cols=55 Identities=9% Similarity=0.215 Sum_probs=36.0
Q ss_pred HhhcccccccccccCchhHHHHHhh----CCceeccCCcccchhhHHHHHhhhcceeecccccCHHHHHHHHHHHHh
Q 011832 359 VLAHQAVAGFLTHSGWNSTLESIVA----GVPMICWPYFADQQINSRFVSEVWNLGLDMKDVCDRNVVEKMVNDLMV 431 (476)
Q Consensus 359 lL~~~~~~~~I~HGG~~s~~eal~~----GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~l~~~i~~~l~ 431 (476)
....+++ +|.-||=||+.+++.. ++|++.++... +|. +. .+..+++.+++..+++
T Consensus 72 ~~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~G~--------------~gf-l~-~~~~~~~~~~~~~i~~ 130 (307)
T 1u0t_A 72 AADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNLGR--------------IGF-LA-EAEAEAIDAVLEHVVA 130 (307)
T ss_dssp ----CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEECSS--------------CCS-SC-SEEGGGHHHHHHHHHH
T ss_pred cccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeCCC--------------Ccc-Cc-ccCHHHHHHHHHHHHc
Confidence 4445676 9999999999999754 89999986421 121 11 2456777777777776
No 209
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=38.27 E-value=17 Score=33.64 Aligned_cols=31 Identities=13% Similarity=0.009 Sum_probs=25.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|||+|+..|..| ..+|..|+++||+|+++..
T Consensus 1 m~I~iiG~G~mG-----~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMG-----SALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHHHCCEEEEECC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCeEEEEEc
Confidence 689998776555 4578999999999999875
No 210
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=38.13 E-value=1.4e+02 Score=29.50 Aligned_cols=33 Identities=15% Similarity=0.427 Sum_probs=25.6
Q ss_pred HHHHHhcCCCCceEEEECCCcchHHHHHHHc-------CCCeEEE
Q 011832 101 LKQMLIDTSPPVSCIIGDACMEFVVDVATEL-------EIPVIHF 138 (476)
Q Consensus 101 l~~ll~~~~~~~DlvI~D~~~~~~~~vA~~l-------~iP~i~~ 138 (476)
+.+++++. +||++|.+.. ...+|+++ |||++.+
T Consensus 426 l~~~i~~~--~pDLiig~~~---~~~~a~~~~~~g~~~gip~v~i 465 (519)
T 1qgu_B 426 FRSLMFTR--QPDFMIGNSY---GKFIQRDTLAKGKAFEVPLIRL 465 (519)
T ss_dssp HHHHHHHH--CCSEEEECGG---GHHHHHHHHHHCGGGCCCEEEC
T ss_pred HHHHHhhc--CCCEEEECcc---hHHHHHHhhcccccCCCCeEEe
Confidence 45566665 7899998853 47788888 9999876
No 211
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=38.10 E-value=30 Score=31.56 Aligned_cols=35 Identities=6% Similarity=-0.080 Sum_probs=25.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKH 45 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~ 45 (476)
.|+|+|+ |+.|.+- ..+++.|+++||+|+.++-..
T Consensus 4 ~~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 38 (321)
T 3c1o_A 4 MEKIIIY--GGTGYIG--KFMVRASLSFSHPTFIYARPL 38 (321)
T ss_dssp CCCEEEE--TTTSTTH--HHHHHHHHHTTCCEEEEECCC
T ss_pred ccEEEEE--cCCchhH--HHHHHHHHhCCCcEEEEECCc
Confidence 3566665 4556553 478899999999999988643
No 212
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=37.96 E-value=32 Score=31.45 Aligned_cols=30 Identities=17% Similarity=0.143 Sum_probs=26.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 9 HILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 9 ~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
||.|+-.+..|. ++|+.|+++||+|+++.-
T Consensus 5 kIgfIGlG~MG~-----~mA~~L~~~G~~v~v~dr 34 (300)
T 3obb_A 5 QIAFIGLGHMGA-----PMATNLLKAGYLLNVFDL 34 (300)
T ss_dssp EEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred EEEEeeehHHHH-----HHHHHHHhCCCeEEEEcC
Confidence 799999988874 689999999999999864
No 213
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=37.96 E-value=25 Score=30.88 Aligned_cols=34 Identities=15% Similarity=0.057 Sum_probs=26.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
...|||+|+-.|..| ..+|+.|+++||+|+++..
T Consensus 17 ~~~~kIgiIG~G~mG-----~alA~~L~~~G~~V~~~~r 50 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVG-----RTMAGALADLGHEVTIGTR 50 (245)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEES
T ss_pred cCCCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 346899999766544 5679999999999999875
No 214
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=37.95 E-value=42 Score=31.09 Aligned_cols=73 Identities=8% Similarity=0.092 Sum_probs=46.9
Q ss_pred cCHHHHHHHHHHHHhcCCceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccChHHHhhcccccccccccCchhHHHHH
Q 011832 302 LKREQLIEFWHGLVDSKQRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQEEVLAHQAVAGFLTHSGWNSTLESI 381 (476)
Q Consensus 302 ~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HGG~~s~~eal 381 (476)
.+.+..+.+.+++..-..+.||...++. +-.++.++++...|-.+|+. ||=+.-..+++-++
T Consensus 62 td~~Ra~dL~~a~~Dp~i~aI~~~rGG~----------------g~~rlL~~LD~~~i~~~PK~--~~GySDiT~L~~al 123 (327)
T 4h1h_A 62 SIRSRVADIHEAFNDSSVKAILTVIGGF----------------NSNQLLPYLDYDLISENPKI--LCGFSDITALATAI 123 (327)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCS----------------CGGGGGGGCCHHHHHHSCCE--EEECTTHHHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcCCch----------------hHHHHhhhcchhhhccCCeE--EEecccccHHHHHH
Confidence 3456677788889888888999987662 22334455555666666666 77777666666666
Q ss_pred h--hCCceeccCC
Q 011832 382 V--AGVPMICWPY 392 (476)
Q Consensus 382 ~--~GvP~l~iP~ 392 (476)
+ .|+..+--|+
T Consensus 124 ~~~~g~~t~hGp~ 136 (327)
T 4h1h_A 124 YTQTELITYSGAH 136 (327)
T ss_dssp HHHHCBCEEECCC
T ss_pred HHhcCeEEEeCcc
Confidence 4 3555544443
No 215
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=37.94 E-value=90 Score=30.64 Aligned_cols=102 Identities=7% Similarity=0.031 Sum_probs=56.8
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhcccccccccCCCCeeEEecCC--CCCCCCCC-
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHERLIRYTDIHDRFLQYSEFQFKTISD--GLPADHPR- 81 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~--~~~~~~~~- 81 (476)
..+||-++++. ++=.-...+|+.|.+.|.++. ++....+.+.+.+ +....+.+ ++|+....
T Consensus 7 ~~~i~~aLISV---sDK~glvelAk~L~~lGfeI~--ATgGTak~L~e~G-----------I~v~~V~~vTgfPEil~GR 70 (523)
T 3zzm_A 7 RRPIRRALISV---YDKTGLVDLAQGLSAAGVEII--STGSTAKTIADTG-----------IPVTPVEQLTGFPEVLDGR 70 (523)
T ss_dssp CCCCCEEEEEE---SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHHHTTT-----------CCCEEHHHHHSCCCCTTTT
T ss_pred cccccEEEEEE---eccccHHHHHHHHHHCCCEEE--EcchHHHHHHHcC-----------CceeeccccCCCchhhCCc
Confidence 34566666665 455558899999999998874 5545666665555 33333321 44543111
Q ss_pred -CCCcHHHHHHHHHh-hchHHHHHHHhcCCCCceEEEECCCcc
Q 011832 82 -AGDQLMEMFDSLSL-NTRPLLKQMLIDTSPPVSCIIGDACME 122 (476)
Q Consensus 82 -~~~~~~~~~~~~~~-~~~~~l~~ll~~~~~~~DlvI~D~~~~ 122 (476)
.+-++.-.-.-+.+ .....+.++-+..-.+.|+||++.+-+
T Consensus 71 VKTLHP~ihgGiLa~r~~~~h~~~l~~~~i~~iDlVvvNLYPF 113 (523)
T 3zzm_A 71 VKTLHPRVHAGLLADLRKSEHAAALEQLGIEAFELVVVNLYPF 113 (523)
T ss_dssp SSSCSHHHHHHHHCCTTSHHHHHHHHHHTCCCCSEEEEECCCH
T ss_pred cccCCchhhhhhccCCCCHHHHHHHHHCCCCceeEEEEeCCCh
Confidence 12233333333332 234555555554335899999995544
No 216
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=37.94 E-value=35 Score=29.44 Aligned_cols=33 Identities=6% Similarity=0.027 Sum_probs=25.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
||+++++.++. - --.++|+.|+++|++|.+..-
T Consensus 2 ~k~vlITGas~-g--IG~~ia~~l~~~G~~V~~~~r 34 (235)
T 3l77_A 2 MKVAVITGASR-G--IGEAIARALARDGYALALGAR 34 (235)
T ss_dssp CCEEEEESCSS-H--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCc-H--HHHHHHHHHHHCCCEEEEEeC
Confidence 56777775443 2 357899999999999988875
No 217
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=37.93 E-value=17 Score=33.32 Aligned_cols=32 Identities=19% Similarity=-0.033 Sum_probs=26.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
+|||+|+..|+.|- .+|..|. +||+|+++...
T Consensus 2 ~mkI~IiGaGa~G~-----~~a~~L~-~g~~V~~~~r~ 33 (307)
T 3ego_A 2 SLKIGIIGGGSVGL-----LCAYYLS-LYHDVTVVTRR 33 (307)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHH-TTSEEEEECSC
T ss_pred CCEEEEECCCHHHH-----HHHHHHh-cCCceEEEECC
Confidence 48999998877764 6788898 99999999874
No 218
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=37.76 E-value=44 Score=26.20 Aligned_cols=33 Identities=18% Similarity=0.310 Sum_probs=25.6
Q ss_pred CceEEEECCCcc--hHHHHHHHc-------CCCeEEEecCch
Q 011832 111 PVSCIIGDACME--FVVDVATEL-------EIPVIHFRAISA 143 (476)
Q Consensus 111 ~~DlvI~D~~~~--~~~~vA~~l-------~iP~i~~~~~~~ 143 (476)
+||+||.|...+ -|..+++.+ ++|+|.++....
T Consensus 57 ~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~~ 98 (134)
T 3to5_A 57 DFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEAK 98 (134)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSCC
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCCC
Confidence 789999999988 667776654 489888876543
No 219
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=37.65 E-value=24 Score=29.95 Aligned_cols=32 Identities=9% Similarity=0.101 Sum_probs=23.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|||+|+. +.|.+- ..+++.|.++||+|+++..
T Consensus 1 m~i~iiG--a~G~~G--~~ia~~l~~~g~~V~~~~r 32 (212)
T 1jay_A 1 MRVALLG--GTGNLG--KGLALRLATLGHEIVVGSR 32 (212)
T ss_dssp CEEEEET--TTSHHH--HHHHHHHHTTTCEEEEEES
T ss_pred CeEEEEc--CCCHHH--HHHHHHHHHCCCEEEEEeC
Confidence 6888885 234333 4678999999999998875
No 220
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=37.62 E-value=42 Score=29.87 Aligned_cols=37 Identities=19% Similarity=0.107 Sum_probs=26.8
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 4 KPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 4 ~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
+.-+.|+++++.++. - --.++|+.|+++|++|.+...
T Consensus 24 ~~l~~k~vlVTGas~-g--IG~aia~~la~~G~~V~~~~~ 60 (269)
T 4dmm_A 24 LPLTDRIALVTGASR-G--IGRAIALELAAAGAKVAVNYA 60 (269)
T ss_dssp CTTTTCEEEETTCSS-H--HHHHHHHHHHHTTCEEEEEES
T ss_pred cCCCCCEEEEECCCC-H--HHHHHHHHHHHCCCEEEEEeC
Confidence 333457778875544 2 356899999999999998765
No 221
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=37.60 E-value=25 Score=31.66 Aligned_cols=32 Identities=25% Similarity=0.162 Sum_probs=25.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
.|||.|+..|..| ..+|+.|+++||+|+++..
T Consensus 1 s~~i~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 32 (287)
T 3pef_A 1 SQKFGFIGLGIMG-----SAMAKNLVKAGCSVTIWNR 32 (287)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEEeecHHH-----HHHHHHHHHCCCeEEEEcC
Confidence 3789999766544 5678999999999998765
No 222
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=37.59 E-value=53 Score=27.30 Aligned_cols=100 Identities=10% Similarity=0.046 Sum_probs=52.6
Q ss_pred hhhhhhhcCCCCCeEEEEEeccccccCHHHHHHHHHHHHhcCCceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccCh
Q 011832 277 RSCIEWLGKQPVRSVLYVSFGSITLLKREQLIEFWHGLVDSKQRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQ 356 (476)
Q Consensus 277 ~~~~~~l~~~~~~~~I~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq 356 (476)
.++-++|.+++ ...||-|.. ........++....+-++|=+++.... +. .+..-+..++++..+.
T Consensus 35 ~~lg~~La~~g---~~lVsGGg~----~Gim~aa~~gAl~~gG~tigVlP~~~~-----~~---~~~~~~~~i~~~~~~~ 99 (176)
T 2iz6_A 35 NELGKQIATHG---WILLTGGRS----LGVMHEAMKGAKEAGGTTIGVLPGPDT-----SE---ISDAVDIPIVTGLGSA 99 (176)
T ss_dssp HHHHHHHHHTT---CEEEEECSS----SSHHHHHHHHHHHTTCCEEEEECC-------------CCTTCSEEEECCCCSS
T ss_pred HHHHHHHHHCC---CEEEECCCc----cCHhHHHHHHHHHcCCEEEEEeCchhh-----hh---hccCCceeEEcCCHHH
Confidence 45666776542 566666641 122234445555556666666542210 01 0000011334555565
Q ss_pred H-HHhh-cccccccccccCchhHHHH---HhhCCceeccCC
Q 011832 357 E-EVLA-HQAVAGFLTHSGWNSTLES---IVAGVPMICWPY 392 (476)
Q Consensus 357 ~-~lL~-~~~~~~~I~HGG~~s~~ea---l~~GvP~l~iP~ 392 (476)
. .++. .++. .++-=||.||+-|+ +.+++|++.+|.
T Consensus 100 Rk~~m~~~sda-~IvlpGg~GTL~E~~~al~~~kpV~~l~~ 139 (176)
T 2iz6_A 100 RDNINALSSNV-LVAVGMGPGTAAEVALALKAKKPVVLLGT 139 (176)
T ss_dssp SCCCCGGGCSE-EEEESCCHHHHHHHHHHHHTTCCEEEESC
T ss_pred HHHHHHHhCCE-EEEecCCccHHHHHHHHHHhCCcEEEEcC
Confidence 3 3443 3443 45567888876554 779999999998
No 223
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=37.57 E-value=20 Score=33.17 Aligned_cols=37 Identities=19% Similarity=0.274 Sum_probs=26.0
Q ss_pred CCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 1 MEEKPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 1 ~~~~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|..+ +.+||.|+..|..| ..+|..|+++||+|+++..
T Consensus 1 m~~~-~~~kI~vIGaG~MG-----~~iA~~la~~G~~V~l~d~ 37 (319)
T 2dpo_A 1 MASP-AAGDVLIVGSGLVG-----RSWAMLFASGGFRVKLYDI 37 (319)
T ss_dssp -------CEEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCCC-CCceEEEEeeCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 5443 45789999776555 5789999999999999876
No 224
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=37.56 E-value=32 Score=28.75 Aligned_cols=36 Identities=14% Similarity=0.028 Sum_probs=29.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 011832 9 HILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKH 45 (476)
Q Consensus 9 ~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~ 45 (476)
||++.-.|+.+=+ -...+.+.|.++|++|.++.++.
T Consensus 4 ~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~ 39 (181)
T 1g63_A 4 KLLICATASINVI-NINHYIVELKQHFDEVNILFSPS 39 (181)
T ss_dssp CEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGG
T ss_pred EEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchh
Confidence 6877777776555 67899999999999999999854
No 225
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=37.54 E-value=43 Score=29.63 Aligned_cols=40 Identities=20% Similarity=0.132 Sum_probs=27.8
Q ss_pred CCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 1 MEEKPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 1 ~~~~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|..+.-+.|+++++.++.| --.++|+.|+++|++|.++.-
T Consensus 1 M~~~~l~~k~~lVTGas~G---IG~aia~~l~~~G~~V~~~~r 40 (265)
T 3lf2_A 1 MKPYDLSEAVAVVTGGSSG---IGLATVELLLEAGAAVAFCAR 40 (265)
T ss_dssp --CCCCTTCEEEEETCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCccCcCCCEEEEeCCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 4444444577777755543 357899999999999988865
No 226
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=37.45 E-value=18 Score=33.34 Aligned_cols=33 Identities=9% Similarity=0.068 Sum_probs=26.2
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCC-EEEEEeC
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFGLAGL-KVTFLNS 43 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGH-~Vt~~~~ 43 (476)
+.|||+|+..|..| ..+|+.|+++|| +|+++..
T Consensus 23 ~~~~I~iIG~G~mG-----~~~A~~L~~~G~~~V~~~dr 56 (312)
T 3qsg_A 23 NAMKLGFIGFGEAA-----SAIASGLRQAGAIDMAAYDA 56 (312)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHHSCCEEEEECS
T ss_pred CCCEEEEECccHHH-----HHHHHHHHHCCCCeEEEEcC
Confidence 45899999776555 578999999999 9998876
No 227
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=37.21 E-value=30 Score=31.16 Aligned_cols=31 Identities=13% Similarity=0.082 Sum_probs=24.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEe
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLN 42 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~ 42 (476)
+|||+|+..|..|. .+|+.|.+.||+|+++.
T Consensus 3 ~m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 3 AMKLGFIGLGIMGS-----PMAINLARAGHQLHVTT 33 (295)
T ss_dssp -CEEEECCCSTTHH-----HHHHHHHHTTCEEEECC
T ss_pred CCEEEEEccCHHHH-----HHHHHHHhCCCEEEEEc
Confidence 37999997776664 56888999999998775
No 228
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=37.21 E-value=1.3e+02 Score=22.68 Aligned_cols=48 Identities=6% Similarity=-0.031 Sum_probs=34.3
Q ss_pred hCCceeccCCcccchhhHHHHHhhhcceeecccccCHHHHHHHHHHHHhH
Q 011832 383 AGVPMICWPYFADQQINSRFVSEVWNLGLDMKDVCDRNVVEKMVNDLMVE 432 (476)
Q Consensus 383 ~GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~l~~~i~~~l~~ 432 (476)
..+|++++--..|.. ...+. -+.|+--.+.+.++.++|.++|++++..
T Consensus 77 ~~~pii~~t~~~~~~-~~~~~-~~~ga~~~l~KP~~~~~L~~~i~~~l~~ 124 (136)
T 3t6k_A 77 KTLPILMLTAQGDIS-AKIAG-FEAGANDYLAKPFEPQELVYRVKNILAR 124 (136)
T ss_dssp TTCCEEEEECTTCHH-HHHHH-HHHTCSEEEETTCCHHHHHHHHHHHHHC
T ss_pred CCccEEEEecCCCHH-HHHHH-HhcCcceEEeCCCCHHHHHHHHHHHHhc
Confidence 367888776554443 33333 3458777777889999999999999873
No 229
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=37.18 E-value=1.8e+02 Score=26.74 Aligned_cols=125 Identities=15% Similarity=0.126 Sum_probs=67.1
Q ss_pred CeEEEEEeccccccCHHHHHHHHHHHHhc--CCceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccChHHHhhccccc
Q 011832 289 RSVLYVSFGSITLLKREQLIEFWHGLVDS--KQRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQEEVLAHQAVA 366 (476)
Q Consensus 289 ~~~I~vs~Gs~~~~~~~~~~~~~~a~~~~--~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq~~lL~~~~~~ 366 (476)
-++.+|..|.+. ...+.++... +..++.+.+.+ .+....+.++. ++ .-+-...++|..+++.
T Consensus 14 ~rvgiiG~G~~g-------~~~~~~l~~~~~~~~lvav~d~~-----~~~~~~~~~~~--~~--~~~~~~~~ll~~~~~D 77 (354)
T 3q2i_A 14 IRFALVGCGRIA-------NNHFGALEKHADRAELIDVCDID-----PAALKAAVERT--GA--RGHASLTDMLAQTDAD 77 (354)
T ss_dssp EEEEEECCSTTH-------HHHHHHHHHTTTTEEEEEEECSS-----HHHHHHHHHHH--CC--EEESCHHHHHHHCCCS
T ss_pred ceEEEEcCcHHH-------HHHHHHHHhCCCCeEEEEEEcCC-----HHHHHHHHHHc--CC--ceeCCHHHHhcCCCCC
Confidence 358888888775 2345666665 44666666543 11223333322 22 3445667888755443
Q ss_pred ccccccC----chhHHHHHhhCCceecc-CCcc--cchhhHHHHHhhhcceeeccc--ccCHHHHHHHHHHHHh
Q 011832 367 GFLTHSG----WNSTLESIVAGVPMICW-PYFA--DQQINSRFVSEVWNLGLDMKD--VCDRNVVEKMVNDLMV 431 (476)
Q Consensus 367 ~~I~HGG----~~s~~eal~~GvP~l~i-P~~~--DQ~~na~~v~~~~G~G~~~~~--~~~~~~l~~~i~~~l~ 431 (476)
+++---- .--+.+++.+|+++++= |+.. ++-.-...++++.|+-+.+.. .+.+ ....++++++
T Consensus 78 ~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p--~~~~~k~~i~ 149 (354)
T 3q2i_A 78 IVILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQNRRNA--TLQLLKRAMQ 149 (354)
T ss_dssp EEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGSH--HHHHHHHHHH
T ss_pred EEEECCCcHHHHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEEcccCCH--HHHHHHHHHh
Confidence 3543222 22467789999998873 6543 344444444466676555542 3444 2344455554
No 230
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=37.17 E-value=17 Score=33.45 Aligned_cols=36 Identities=17% Similarity=0.158 Sum_probs=26.6
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCC-EEEEEeCC
Q 011832 4 KPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGL-KVTFLNSK 44 (476)
Q Consensus 4 ~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH-~Vt~~~~~ 44 (476)
|.++|||+++..|..|. .+|..|+++|| +|+++...
T Consensus 1 M~~~~kI~VIGaG~~G~-----~ia~~la~~g~~~V~l~D~~ 37 (317)
T 2ewd_A 1 MIERRKIAVIGSGQIGG-----NIAYIVGKDNLADVVLFDIA 37 (317)
T ss_dssp CCCCCEEEEECCSHHHH-----HHHHHHHHHTCCEEEEECSS
T ss_pred CCCCCEEEEECCCHHHH-----HHHHHHHhCCCceEEEEeCC
Confidence 34568999997544443 38888999999 99888764
No 231
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=37.16 E-value=28 Score=30.13 Aligned_cols=33 Identities=6% Similarity=0.063 Sum_probs=24.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCC-CEEEEEeC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAG-LKVTFLNS 43 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rG-H~Vt~~~~ 43 (476)
||.++++ |+.|-+ -..+++.|+++| |+|+++.-
T Consensus 23 mk~vlVt-GatG~i--G~~l~~~L~~~G~~~V~~~~R 56 (236)
T 3qvo_A 23 MKNVLIL-GAGGQI--ARHVINQLADKQTIKQTLFAR 56 (236)
T ss_dssp CEEEEEE-TTTSHH--HHHHHHHHTTCTTEEEEEEES
T ss_pred ccEEEEE-eCCcHH--HHHHHHHHHhCCCceEEEEEc
Confidence 5555555 444544 368899999999 99999875
No 232
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=37.03 E-value=27 Score=26.03 Aligned_cols=32 Identities=13% Similarity=0.126 Sum_probs=24.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCC-CEEEEEeC
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLAG-LKVTFLNS 43 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~rG-H~Vt~~~~ 43 (476)
.++|+++.. |.+ -..+++.|.++| |+|+++..
T Consensus 5 ~~~v~I~G~---G~i--G~~~~~~l~~~g~~~v~~~~r 37 (118)
T 3ic5_A 5 RWNICVVGA---GKI--GQMIAALLKTSSNYSVTVADH 37 (118)
T ss_dssp CEEEEEECC---SHH--HHHHHHHHHHCSSEEEEEEES
T ss_pred cCeEEEECC---CHH--HHHHHHHHHhCCCceEEEEeC
Confidence 467888744 443 357899999999 99988875
No 233
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=37.01 E-value=21 Score=31.71 Aligned_cols=30 Identities=13% Similarity=0.046 Sum_probs=23.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEe
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLN 42 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~ 42 (476)
|||.|+..|..|. .+|+.|+++||+|+++.
T Consensus 1 M~I~iIG~G~mG~-----~la~~l~~~g~~V~~~~ 30 (264)
T 1i36_A 1 LRVGFIGFGEVAQ-----TLASRLRSRGVEVVTSL 30 (264)
T ss_dssp CEEEEESCSHHHH-----HHHHHHHHTTCEEEECC
T ss_pred CeEEEEechHHHH-----HHHHHHHHCCCeEEEeC
Confidence 6899987665553 57999999999999853
No 234
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=36.69 E-value=1.7e+02 Score=26.93 Aligned_cols=101 Identities=13% Similarity=0.103 Sum_probs=57.7
Q ss_pred CCEEEEEcCCCcc--C--HHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhcccccccccCCCCeeEEecCCCCCCCCCCC
Q 011832 7 SPHILIFPLPCQS--H--MNSMLKLAEIFGLAGLKVTFLNSKHNHERLIRYTDIHDRFLQYSEFQFKTISDGLPADHPRA 82 (476)
Q Consensus 7 ~~~il~~~~~~~g--H--~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~ 82 (476)
+.-|++.|..+.. . ..-+.++++.|.++|++|.+++.+...+..++... . .+ -.... ...
T Consensus 185 ~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~---~---~~-~~~~~---------l~g 248 (349)
T 3tov_A 185 DILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVE---Q---ME-TKPIV---------ATG 248 (349)
T ss_dssp CCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHH---T---CS-SCCEE---------CTT
T ss_pred CCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHH---h---cc-cccEE---------eeC
Confidence 3456677755432 1 23599999999999999998776543332222211 0 00 00000 000
Q ss_pred CCcHHHHHHHHHhhchHHHHHHHhcCCCCceEEEECCCcchHHHHHHHcCCCeEEEecC
Q 011832 83 GDQLMEMFDSLSLNTRPLLKQMLIDTSPPVSCIIGDACMEFVVDVATELEIPVIHFRAI 141 (476)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~DlvI~D~~~~~~~~vA~~l~iP~i~~~~~ 141 (476)
..+ -.++.+++... |++|+-- ...+.+|..+|+|+|.++..
T Consensus 249 ~~s------------l~e~~ali~~a----~~~i~~D--sG~~HlAaa~g~P~v~lfg~ 289 (349)
T 3tov_A 249 KFQ------------LGPLAAAMNRC----NLLITND--SGPMHVGISQGVPIVALYGP 289 (349)
T ss_dssp CCC------------HHHHHHHHHTC----SEEEEES--SHHHHHHHTTTCCEEEECSS
T ss_pred CCC------------HHHHHHHHHhC----CEEEECC--CCHHHHHHhcCCCEEEEECC
Confidence 111 22355566644 8888742 34577899999999998653
No 235
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=36.45 E-value=68 Score=26.92 Aligned_cols=69 Identities=12% Similarity=0.162 Sum_probs=40.5
Q ss_pred cchhhHHHHHhhhcceeecccccCHHHHHHHHHHHHhHhH-----HHHHHHHHHHHHHHHH--HH--hcCCChHHHHHHH
Q 011832 395 DQQINSRFVSEVWNLGLDMKDVCDRNVVEKMVNDLMVERK-----EEFMRAADRMATMART--TA--NEGGPSYCNLDRL 465 (476)
Q Consensus 395 DQ~~na~~v~~~~G~G~~~~~~~~~~~l~~~i~~~l~~~~-----~~y~~~a~~~~~~~~~--~~--~~~g~~~~~~~~~ 465 (476)
+..+.+..- +.-|+|+.+ |+|+|.++|.++++... .+|+ +.-.+-..+|+ .+ .++..-...++.-
T Consensus 100 ~~id~~~Fe-~~cGVGV~V----T~EqI~~~V~~~i~~~k~~i~~~RY~-~~g~ll~~vr~~p~LkWAd~~~vK~~vD~~ 173 (187)
T 3tl4_X 100 EASTKMGMN-ENSGVGIEI----TEDQVRNYVMQYIQENKERILTERYK-LVPGIFADVKNLKELKWADPRSFKPIIDQE 173 (187)
T ss_dssp GGCCHHHHH-HTTTTTCCC----CHHHHHHHHHHHHHHTHHHHHHHGGG-GHHHHHHHHHTCGGGTTSCTTSHHHHHHHH
T ss_pred CCCCHHHHH-HHCCCCeEe----CHHHHHHHHHHHHHHhHHHHHHhccc-cHHHHHHHHhcccCCCCCCHHHHHHHHHHH
Confidence 444455555 667888876 78999999999987311 2344 44444444444 23 2455555555554
Q ss_pred HHHH
Q 011832 466 IDDI 469 (476)
Q Consensus 466 i~~~ 469 (476)
+-.+
T Consensus 174 ~l~l 177 (187)
T 3tl4_X 174 VLKL 177 (187)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4444
No 236
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=36.29 E-value=53 Score=30.13 Aligned_cols=75 Identities=16% Similarity=0.189 Sum_probs=54.6
Q ss_pred ccCHHHHHHHHHHHHhcCCceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccChHHHhh-cccccccccccCchhHHH
Q 011832 301 LLKREQLIEFWHGLVDSKQRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQEEVLA-HQAVAGFLTHSGWNSTLE 379 (476)
Q Consensus 301 ~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq~~lL~-~~~~~~~I~HGG~~s~~e 379 (476)
..+.+..+.+.+++..-..+.||...++. +-.++.++++...+-. +|+. ||=+.-...++-
T Consensus 63 gtd~~Ra~dL~~a~~Dp~i~aI~~~rGGy----------------ga~rlLp~LD~~~i~~a~PK~--~iGySDiTaL~~ 124 (311)
T 1zl0_A 63 GTVEQRLEDLHNAFDMPDITAVWCLRGGY----------------GCGQLLPGLDWGRLQAASPRP--LIGFSDISVLLS 124 (311)
T ss_dssp SCHHHHHHHHHHHHHSTTEEEEEESCCSS----------------CGGGGTTTCCHHHHHHSCCCC--EEECGGGHHHHH
T ss_pred CCHHHHHHHHHHHHhCCCCCEEEEccCCc----------------CHHHHhhccchhhhhccCCCE--EEEEchhHHHHH
Confidence 34556677788888887788899988762 2233455565566665 7888 999999999999
Q ss_pred HHh-hCCceeccCCc
Q 011832 380 SIV-AGVPMICWPYF 393 (476)
Q Consensus 380 al~-~GvP~l~iP~~ 393 (476)
+++ .|++.+--|..
T Consensus 125 al~~~G~~t~hGp~~ 139 (311)
T 1zl0_A 125 AFHRHGLPAIHGPVA 139 (311)
T ss_dssp HHHHTTCCEEECCCG
T ss_pred HHHHcCCcEEECHhh
Confidence 987 48887777754
No 237
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=36.25 E-value=30 Score=34.01 Aligned_cols=36 Identities=17% Similarity=0.114 Sum_probs=30.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC-CC-EEEEEeCCc
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGLA-GL-KVTFLNSKH 45 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~r-GH-~Vt~~~~~~ 45 (476)
++.|||.|+..|..| ..+|..|+++ || +|+++....
T Consensus 16 ~~~mkIaVIGlG~mG-----~~lA~~la~~~G~~~V~~~D~~~ 53 (478)
T 3g79_A 16 GPIKKIGVLGMGYVG-----IPAAVLFADAPCFEKVLGFQRNS 53 (478)
T ss_dssp CSCCEEEEECCSTTH-----HHHHHHHHHSTTCCEEEEECCCC
T ss_pred CCCCEEEEECcCHHH-----HHHHHHHHHhCCCCeEEEEECCh
Confidence 456899999888777 5789999999 99 999987643
No 238
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=36.12 E-value=22 Score=34.69 Aligned_cols=39 Identities=13% Similarity=0.213 Sum_probs=29.7
Q ss_pred CCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 1 MEEKPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 1 ~~~~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
|..|++..+|+|+..|-. -+..|..|+++|++|+++-..
T Consensus 5 ~~~~~~~~dvvVIGaG~~-----GL~aA~~La~~G~~V~vlE~~ 43 (453)
T 2bcg_G 5 QETIDTDYDVIVLGTGIT-----ECILSGLLSVDGKKVLHIDKQ 43 (453)
T ss_dssp --CCCCBCSEEEECCSHH-----HHHHHHHHHHTTCCEEEECSS
T ss_pred hhhccccCCEEEECcCHH-----HHHHHHHHHHCCCeEEEEeCC
Confidence 445666788999886633 578899999999999998764
No 239
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=36.10 E-value=63 Score=24.08 Aligned_cols=37 Identities=27% Similarity=0.214 Sum_probs=25.5
Q ss_pred HHhcCCCCceEEEECCCcc--hHHHHHHHc-------CCCeEEEecCc
Q 011832 104 MLIDTSPPVSCIIGDACME--FVVDVATEL-------EIPVIHFRAIS 142 (476)
Q Consensus 104 ll~~~~~~~DlvI~D~~~~--~~~~vA~~l-------~iP~i~~~~~~ 142 (476)
.+.+. +||+||.|...+ -+..+.+.+ ++|++.++...
T Consensus 41 ~l~~~--~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~ 86 (122)
T 3gl9_A 41 KLSEF--TPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKG 86 (122)
T ss_dssp HHTTB--CCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCC
T ss_pred HHHhc--CCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCC
Confidence 34444 789999998776 455665543 58888887654
No 240
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=35.93 E-value=49 Score=30.19 Aligned_cols=38 Identities=8% Similarity=-0.021 Sum_probs=29.3
Q ss_pred CCEEEEEcCCCcc-C---HHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 7 SPHILIFPLPCQS-H---MNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 7 ~~~il~~~~~~~g-H---~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
++||+++..+-.+ | +.....++++|.++||+|..+.+.
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~ 54 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPA 54 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789888854332 2 356889999999999999999853
No 241
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=35.89 E-value=1.3e+02 Score=22.18 Aligned_cols=47 Identities=11% Similarity=0.112 Sum_probs=33.9
Q ss_pred hCCceeccCCcccchhhHHHHHhhhcceeecccccCHHHHHHHHHHHHh
Q 011832 383 AGVPMICWPYFADQQINSRFVSEVWNLGLDMKDVCDRNVVEKMVNDLMV 431 (476)
Q Consensus 383 ~GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~l~~~i~~~l~ 431 (476)
..+|++++--..+.. ...+. .+.|+--.+.+.++.++|.++|+++++
T Consensus 75 ~~~pii~~s~~~~~~-~~~~~-~~~Ga~~~l~KP~~~~~L~~~i~~~l~ 121 (122)
T 3gl9_A 75 KRIPVIVLTAKGGEE-DESLA-LSLGARKVMRKPFSPSQFIEEVKHLLN 121 (122)
T ss_dssp TTSCEEEEESCCSHH-HHHHH-HHTTCSEEEESSCCHHHHHHHHHHHHC
T ss_pred cCCCEEEEecCCchH-HHHHH-HhcChhhhccCCCCHHHHHHHHHHHhc
Confidence 367888776554433 44444 456887778788999999999998875
No 242
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=35.81 E-value=1.8e+02 Score=23.89 Aligned_cols=137 Identities=9% Similarity=0.052 Sum_probs=69.9
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHHhcCCceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccChHHHhhcccccccc
Q 011832 290 SVLYVSFGSITLLKREQLIEFWHGLVDSKQRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQEEVLAHQAVAGFL 369 (476)
Q Consensus 290 ~~I~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I 369 (476)
+.|-|-+||.. +....++....++.++..+=..+-.-+ ...+.+.++.+.. -=...++ ||
T Consensus 8 ~~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V~SaH--R~p~~~~~~~~~a--------------~~~g~~V--iI 67 (174)
T 3lp6_A 8 PRVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRVVSAH--RTPEAMFSYARGA--------------AARGLEV--II 67 (174)
T ss_dssp CSEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTT--TCHHHHHHHHHHH--------------HHHTCCE--EE
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEECCC--CCHHHHHHHHHHH--------------HhCCCCE--EE
Confidence 34666677765 566778888888988876544433221 1111122221100 0022344 88
Q ss_pred cccCch----hHHHHHhhCCceeccCCcccchhhHH-----HHHhhhcceee---cccccCHHHHHHHHHHHHhHhHHHH
Q 011832 370 THSGWN----STLESIVAGVPMICWPYFADQQINSR-----FVSEVWNLGLD---MKDVCDRNVVEKMVNDLMVERKEEF 437 (476)
Q Consensus 370 ~HGG~~----s~~eal~~GvP~l~iP~~~DQ~~na~-----~v~~~~G~G~~---~~~~~~~~~l~~~i~~~l~~~~~~y 437 (476)
.=+|.. ++..++ .-+|+|.+|...-. +++. .+.-=.|+.+. ++...++.-++..|-.+- | +..
T Consensus 68 a~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~-l~G~daLlS~vqmp~GvpVatV~I~~~~nAa~lAa~Il~~~-d--~~l 142 (174)
T 3lp6_A 68 AGAGGAAHLPGMVAAA-TPLPVIGVPVPLGR-LDGLDSLLSIVQMPAGVPVATVSIGGAGNAGLLAVRMLGAA-N--PQL 142 (174)
T ss_dssp EEEESSCCHHHHHHHH-CSSCEEEEEECCSS-GGGHHHHHHHHCCCTTCCCEECCTTCHHHHHHHHHHHHHTT-C--HHH
T ss_pred EecCchhhhHHHHHhc-cCCCEEEeeCCCCC-CCCHHHHHHHhhCCCCCeeEEEEcCcchHHHHHHHHHHhCC-C--HHH
Confidence 776644 444333 55799999985322 2211 11001243221 222445555555444332 4 578
Q ss_pred HHHHHHHHHHHHHH
Q 011832 438 MRAADRMATMARTT 451 (476)
Q Consensus 438 ~~~a~~~~~~~~~~ 451 (476)
+++.+..++..++.
T Consensus 143 ~~kl~~~r~~~~~~ 156 (174)
T 3lp6_A 143 RARIVAFQDRLADV 156 (174)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 88888877776653
No 243
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=35.75 E-value=31 Score=33.80 Aligned_cols=35 Identities=9% Similarity=0.009 Sum_probs=27.1
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeC
Q 011832 4 KPKSPHILIFPLPCQSHMNSMLKLAEIFGLA--GLKVTFLNS 43 (476)
Q Consensus 4 ~~~~~~il~~~~~~~gH~~p~l~La~~L~~r--GH~Vt~~~~ 43 (476)
|++.|||+|+..|..| ..+|..|+++ ||+|+++..
T Consensus 2 M~~~mkI~VIG~G~mG-----~~lA~~La~~g~G~~V~~~d~ 38 (467)
T 2q3e_A 2 MFEIKKICCIGAGYVG-----GPTCSVIAHMCPEIRVTVVDV 38 (467)
T ss_dssp CCCCCEEEEECCSTTH-----HHHHHHHHHHCTTSEEEEECS
T ss_pred CCCccEEEEECCCHHH-----HHHHHHHHhcCCCCEEEEEEC
Confidence 4445799999776665 5678888888 899998865
No 244
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=35.61 E-value=44 Score=29.69 Aligned_cols=38 Identities=11% Similarity=0.078 Sum_probs=25.1
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 3 EKPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 3 ~~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
.|+.+.|+++++.++.| =-.++|+.|+++|++|.+...
T Consensus 22 ~m~~~~k~~lVTGas~G---IG~aia~~la~~G~~Vv~~~~ 59 (267)
T 3u5t_A 22 SMMETNKVAIVTGASRG---IGAAIAARLASDGFTVVINYA 59 (267)
T ss_dssp -----CCEEEEESCSSH---HHHHHHHHHHHHTCEEEEEES
T ss_pred ccccCCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEcC
Confidence 34444577777755442 357899999999999998754
No 245
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=35.50 E-value=92 Score=24.15 Aligned_cols=49 Identities=8% Similarity=-0.006 Sum_probs=33.3
Q ss_pred hhCCceeccCCcccchhhHHHHHhhhc-ceeecccccCHHHHHHHHHHHHhH
Q 011832 382 VAGVPMICWPYFADQQINSRFVSEVWN-LGLDMKDVCDRNVVEKMVNDLMVE 432 (476)
Q Consensus 382 ~~GvP~l~iP~~~DQ~~na~~v~~~~G-~G~~~~~~~~~~~l~~~i~~~l~~ 432 (476)
...+|++++--..|.......+ + .| +--.+.+.++.++|.++|++++..
T Consensus 74 ~~~~~ii~~s~~~~~~~~~~~~-~-~g~~~~~l~KP~~~~~L~~~i~~~l~~ 123 (151)
T 3kcn_A 74 SPNSVYLMLTGNQDLTTAMEAV-N-EGQVFRFLNKPCQMSDIKAAINAGIKQ 123 (151)
T ss_dssp CSSCEEEEEECGGGHHHHHHHH-H-HTCCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEECCCCHHHHHHHH-H-cCCeeEEEcCCCCHHHHHHHHHHHHHH
Confidence 3467777775555544333333 3 46 555666789999999999999984
No 246
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=35.33 E-value=41 Score=32.75 Aligned_cols=33 Identities=18% Similarity=0.251 Sum_probs=27.2
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
+.+||+|+..+..| +++|+.|+++||+|+..-.
T Consensus 8 ~~k~v~viG~G~sG-----~s~A~~l~~~G~~V~~~D~ 40 (451)
T 3lk7_A 8 ENKKVLVLGLARSG-----EAAARLLAKLGAIVTVNDG 40 (451)
T ss_dssp TTCEEEEECCTTTH-----HHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEEeeCHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 46799999987654 3569999999999999876
No 247
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=35.23 E-value=54 Score=28.64 Aligned_cols=34 Identities=15% Similarity=0.092 Sum_probs=25.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
+-|+++++.++. - =-.++|+.|+++|++|.+...
T Consensus 8 ~gk~~lVTGas~-g--IG~a~a~~l~~~G~~V~~~~r 41 (248)
T 3op4_A 8 EGKVALVTGASR-G--IGKAIAELLAERGAKVIGTAT 41 (248)
T ss_dssp TTCEEEESSCSS-H--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCC-H--HHHHHHHHHHHCCCEEEEEeC
Confidence 346777775543 2 357899999999999988765
No 248
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=35.20 E-value=43 Score=33.72 Aligned_cols=48 Identities=10% Similarity=0.108 Sum_probs=41.3
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhc
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHERLIRY 53 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~ 53 (476)
++.||++.+.++-.|-....-++..|..+|++|..++.....+.+...
T Consensus 97 ~~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~e~iv~a 144 (579)
T 3bul_A 97 TNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKILRT 144 (579)
T ss_dssp CSCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCHHHHHHH
T ss_pred CCCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH
Confidence 478999999999999999999999999999999999886555555433
No 249
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=35.19 E-value=34 Score=30.79 Aligned_cols=34 Identities=15% Similarity=0.162 Sum_probs=25.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCC-CEEEEEeCC
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLAG-LKVTFLNSK 44 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~rG-H~Vt~~~~~ 44 (476)
+|+|+++ |+.|.+ -..+++.|.++| |+|+.++-.
T Consensus 5 ~~~ilVt--GatG~i--G~~l~~~L~~~g~~~V~~~~R~ 39 (299)
T 2wm3_A 5 KKLVVVF--GGTGAQ--GGSVARTLLEDGTFKVRVVTRN 39 (299)
T ss_dssp CCEEEEE--TTTSHH--HHHHHHHHHHHCSSEEEEEESC
T ss_pred CCEEEEE--CCCchH--HHHHHHHHHhcCCceEEEEEcC
Confidence 4566655 555655 457889999999 999998864
No 250
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=35.12 E-value=44 Score=29.49 Aligned_cols=40 Identities=13% Similarity=0.047 Sum_probs=26.1
Q ss_pred CCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 1 MEEKPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 1 ~~~~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|..+.=+.|+++++.++.| =-.++|+.|+++|++|.+...
T Consensus 1 M~~~~l~~k~vlVTGas~G---IG~aia~~la~~G~~V~~~~~ 40 (259)
T 3edm_A 1 MSLQRFTNRTIVVAGAGRD---IGRACAIRFAQEGANVVLTYN 40 (259)
T ss_dssp ---CTTTTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCccCCCCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEcC
Confidence 4433334467777755443 346899999999999998854
No 251
>4h3k_B RNA polymerase II subunit A C-terminal domain PHO SSU72; heat repeat, phosphatase, RNA polymerase II, hydrolase; HET: SEP; 2.00A {Homo sapiens} PDB: 3o2q_B* 4h3h_B* 3o2s_B
Probab=34.78 E-value=2.1e+02 Score=24.25 Aligned_cols=39 Identities=13% Similarity=0.249 Sum_probs=31.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHN 46 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~ 46 (476)
.+++|+++++ .+-.|....--..|.++|.+|.=+++...
T Consensus 23 ~~~Lr~avVC---aSN~NRSMEAH~~L~k~Gf~V~SfGTGs~ 61 (214)
T 4h3k_B 23 SSPLRVAVVS---SSNQNRSMEAHNILSKRGFSVRSFGTGTH 61 (214)
T ss_dssp ---CEEEEEE---SSSSSHHHHHHHHHHHTTCEEEEEECSSS
T ss_pred CCCCeEEEEC---CCCcchhHHHHHHHHHCCCceEeecCCCc
Confidence 3568898888 57788888989999999999999998554
No 252
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=34.78 E-value=35 Score=33.03 Aligned_cols=31 Identities=23% Similarity=0.147 Sum_probs=25.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|||+|+..|..| ..+|..|+++||+|+++..
T Consensus 1 mkI~VIG~G~vG-----~~~A~~la~~G~~V~~~d~ 31 (436)
T 1mv8_A 1 MRISIFGLGYVG-----AVCAGCLSARGHEVIGVDV 31 (436)
T ss_dssp CEEEEECCSTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECCCHHH-----HHHHHHHHHCCCEEEEEEC
Confidence 689999766555 5688899999999998865
No 253
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=34.46 E-value=23 Score=35.09 Aligned_cols=35 Identities=11% Similarity=0.299 Sum_probs=28.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
.+|.||+|+-.+.-| +.+|+.|.++|++||++...
T Consensus 40 ~~KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~ 74 (502)
T 4g6h_A 40 SDKPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPR 74 (502)
T ss_dssp CSSCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESS
T ss_pred CCCCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCC
Confidence 446799999865444 57899999999999999874
No 254
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=34.45 E-value=51 Score=30.65 Aligned_cols=73 Identities=12% Similarity=0.143 Sum_probs=50.8
Q ss_pred cCHHHHHHHHHHHHhcCCceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccChHHHhhcccccccccccCchhHHHHH
Q 011832 302 LKREQLIEFWHGLVDSKQRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQEEVLAHQAVAGFLTHSGWNSTLESI 381 (476)
Q Consensus 302 ~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HGG~~s~~eal 381 (476)
.+.+..+.+.+++..-..+.||...++. +-.++.++++...|-.+|+. ||=+.-...++-++
T Consensus 63 ~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~----------------g~~rlL~~lD~~~i~~~PK~--~~GySDiTaL~~al 124 (336)
T 3sr3_A 63 SIQERAKELNALIRNPNVSCIMSTIGGM----------------NSNSLLPYIDYDAFQNNPKI--MIGYSDATALLLGI 124 (336)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCS----------------CGGGGGGGSCHHHHHHSCCE--EEECGGGHHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEccccc----------------cHHHHhhhcChhHHhhCCeE--EEEechHHHHHHHH
Confidence 3456677788888877778899988762 22334455555555567777 88888888888887
Q ss_pred h--hCCceeccCC
Q 011832 382 V--AGVPMICWPY 392 (476)
Q Consensus 382 ~--~GvP~l~iP~ 392 (476)
+ .|++.+--|.
T Consensus 125 ~~~~G~~t~hGp~ 137 (336)
T 3sr3_A 125 YAKTGIPTFYGPA 137 (336)
T ss_dssp HHHHCCCEEECCC
T ss_pred HHhcCceEEECCh
Confidence 6 5777776665
No 255
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=34.44 E-value=26 Score=31.88 Aligned_cols=31 Identities=13% Similarity=0.235 Sum_probs=25.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
+||+|+..|..|+ .+|..|+++||+|+++..
T Consensus 16 ~~I~VIG~G~mG~-----~iA~~la~~G~~V~~~d~ 46 (302)
T 1f0y_A 16 KHVTVIGGGLMGA-----GIAQVAAATGHTVVLVDQ 46 (302)
T ss_dssp CEEEEECCSHHHH-----HHHHHHHHTTCEEEEECS
T ss_pred CEEEEECCCHHHH-----HHHHHHHhCCCeEEEEEC
Confidence 5799998776665 588899999999998876
No 256
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=34.27 E-value=42 Score=33.44 Aligned_cols=40 Identities=10% Similarity=0.013 Sum_probs=31.0
Q ss_pred CCCCEEEEEcCCCccC--HHHHHHHHHH--HHhCCCEEEEEeCC
Q 011832 5 PKSPHILIFPLPCQSH--MNSMLKLAEI--FGLAGLKVTFLNSK 44 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH--~~p~l~La~~--L~~rGH~Vt~~~~~ 44 (476)
.++|||+++.....+| -.-+..+++. |.++||+|++++..
T Consensus 203 ~~~~rI~~~~~~~~~~g~~~~~~~l~~~L~~~~~~~~v~~~~~~ 246 (568)
T 2vsy_A 203 KGPLRVGFVSNGFGAHPTGLLTVALFEALQRRQPDLQMHLFATS 246 (568)
T ss_dssp SSCEEEEEEESCSSSSHHHHHHHHHHHHHHHHCTTEEEEEEESS
T ss_pred CCCeEEEEECcccccChHHHHHHHHHhhccCCcccEEEEEEECC
Confidence 4679999998655444 3457889999 77789999999874
No 257
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=34.27 E-value=34 Score=31.19 Aligned_cols=30 Identities=27% Similarity=0.278 Sum_probs=24.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 9 HILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 9 ~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
||.|+-.|..| .++|+.|+++||+|+++..
T Consensus 7 kIgfIGLG~MG-----~~mA~~L~~~G~~V~v~dr 36 (297)
T 4gbj_A 7 KIAFLGLGNLG-----TPIAEILLEAGYELVVWNR 36 (297)
T ss_dssp EEEEECCSTTH-----HHHHHHHHHTTCEEEEC--
T ss_pred cEEEEecHHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 79999988777 4789999999999998653
No 258
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=34.25 E-value=52 Score=28.92 Aligned_cols=35 Identities=11% Similarity=0.031 Sum_probs=26.1
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
..||.++++.++ |-+ -.++|+.|+++|++|.++..
T Consensus 5 ~~~k~vlVTGas-~gI--G~~~a~~l~~~G~~v~~~~~ 39 (264)
T 3i4f_A 5 RFVRHALITAGT-KGL--GKQVTEKLLAKGYSVTVTYH 39 (264)
T ss_dssp -CCCEEEETTTT-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred cccCEEEEeCCC-chh--HHHHHHHHHHCCCEEEEEcC
Confidence 356788887444 433 46899999999999998865
No 259
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=34.10 E-value=46 Score=30.46 Aligned_cols=33 Identities=27% Similarity=0.329 Sum_probs=25.4
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhC-C-CEEEEEeCC
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFGLA-G-LKVTFLNSK 44 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~~r-G-H~Vt~~~~~ 44 (476)
++|||+++..+.. .++++.|.+. | ++|..+...
T Consensus 3 ~~~~Ili~g~g~~------~~l~~~l~~~~~~~~v~~~d~~ 37 (331)
T 2pn1_A 3 QKPHLLITSAGRR------AKLVEYFVKEFKTGRVSTADCS 37 (331)
T ss_dssp TCCEEEEESCTTC------HHHHHHHHHHCCSSEEEEEESC
T ss_pred ccceEEEecCCch------HHHHHHHHHhcCCCEEEEEeCC
Confidence 4689999876554 4789999886 7 888888664
No 260
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=34.05 E-value=27 Score=32.43 Aligned_cols=38 Identities=13% Similarity=0.096 Sum_probs=28.5
Q ss_pred CCCEEEEEcCCCcc--CH---HHHHHHHHHHHhCCCEEEEEeCC
Q 011832 6 KSPHILIFPLPCQS--HM---NSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 6 ~~~~il~~~~~~~g--H~---~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
++|||+++.. ++| |= ....+++++|.+.||+|..+...
T Consensus 2 ~~~~v~vl~g-G~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (343)
T 1e4e_A 2 NRIKVAILFG-GCSEEHDVSVKSAIEIAANINKEKYEPLYIGIT 44 (343)
T ss_dssp CCEEEEEEEE-CSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CCcEEEEEeC-CCCCCcchhHHHHHHHHHHhhhcCCEEEEEEEc
Confidence 4789999984 444 22 25678899999999999998753
No 261
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=34.05 E-value=20 Score=35.40 Aligned_cols=34 Identities=18% Similarity=0.174 Sum_probs=27.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
+++++|.|+..|..| ..+|..|+++||+|+++..
T Consensus 13 ~~~~~IgvIGlG~MG-----~~lA~~La~~G~~V~v~~r 46 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMG-----RNLALNIESRGYTVSIFNR 46 (480)
T ss_dssp --CBSEEEECCSHHH-----HHHHHHHHTTTCCEEEECS
T ss_pred cCCCeEEEEccHHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 578899999877666 5689999999999998865
No 262
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=33.97 E-value=23 Score=33.20 Aligned_cols=36 Identities=17% Similarity=0.278 Sum_probs=29.0
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 4 KPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 4 ~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
|++..+|+|+-.|..| +..|..|+++|++|+++-..
T Consensus 2 m~~~~dVvIIGgGi~G-----l~~A~~La~~G~~V~lle~~ 37 (382)
T 1y56_B 2 LPEKSEIVVIGGGIVG-----VTIAHELAKRGEEVTVIEKR 37 (382)
T ss_dssp CCSBCSEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred CCCcCCEEEECCCHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 3446789999876545 88999999999999999864
No 263
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=33.84 E-value=39 Score=27.38 Aligned_cols=38 Identities=18% Similarity=0.102 Sum_probs=29.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcch
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNH 47 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~ 47 (476)
..+++++..|. | +-|++++++.|.++|.+|+++ ...+.
T Consensus 23 ~~~~llIaGG~-G-ItPl~sm~~~l~~~~~~v~l~-g~r~~ 60 (158)
T 3lrx_A 23 FGKILAIGAYT-G-IVEVYPIAKAWQEIGNDVTTL-HVTFE 60 (158)
T ss_dssp CSEEEEEEETT-H-HHHHHHHHHHHHHHTCEEEEE-EECBG
T ss_pred CCeEEEEEccC-c-HHHHHHHHHHHHhcCCcEEEE-EeCCH
Confidence 45777777443 3 899999999999999999999 65443
No 264
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=33.69 E-value=22 Score=27.75 Aligned_cols=32 Identities=9% Similarity=0.143 Sum_probs=23.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
..||+++.. |.+- ..+++.|.++|++|+++..
T Consensus 6 ~~~v~I~G~---G~iG--~~~a~~l~~~g~~v~~~d~ 37 (144)
T 2hmt_A 6 NKQFAVIGL---GRFG--GSIVKELHRMGHEVLAVDI 37 (144)
T ss_dssp CCSEEEECC---SHHH--HHHHHHHHHTTCCCEEEES
T ss_pred CCcEEEECC---CHHH--HHHHHHHHHCCCEEEEEeC
Confidence 346888864 4333 5678999999999998876
No 265
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=33.66 E-value=49 Score=31.28 Aligned_cols=33 Identities=21% Similarity=0.246 Sum_probs=27.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
.|+|+|+..|. .-+..|..|+++||+|+++-..
T Consensus 3 ~~~v~iiG~G~-----~Gl~~A~~l~~~g~~v~v~E~~ 35 (384)
T 2bi7_A 3 SKKILIVGAGF-----SGAVIGRQLAEKGHQVHIIDQR 35 (384)
T ss_dssp CCEEEEECCSH-----HHHHHHHHHHTTTCEEEEEESS
T ss_pred cCCEEEECcCH-----HHHHHHHHHHHCCCcEEEEEec
Confidence 57899987653 4678899999999999999864
No 266
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=33.64 E-value=30 Score=30.73 Aligned_cols=40 Identities=15% Similarity=0.088 Sum_probs=32.0
Q ss_pred CCCEEEEEcCCCc---cCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 011832 6 KSPHILIFPLPCQ---SHMNSMLKLAEIFGLAGLKVTFLNSKH 45 (476)
Q Consensus 6 ~~~~il~~~~~~~---gH~~p~l~La~~L~~rGH~Vt~~~~~~ 45 (476)
.+||..|++.+-. |-=.-..+|+..|.+||++||.+=-++
T Consensus 21 ~~mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt~~KiDP 63 (294)
T 2c5m_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDP 63 (294)
T ss_dssp CCCEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEECCEEEC
T ss_pred eceEEEEEcCccccccchHHHHHHHHHHHHHCCCeeEEEecCC
Confidence 5789999996644 555778999999999999999865543
No 267
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=33.64 E-value=50 Score=28.83 Aligned_cols=33 Identities=9% Similarity=0.066 Sum_probs=24.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
||+++++.+ .|- =-.++++.|+++|++|+++.-
T Consensus 1 mk~vlVTGa-s~g--IG~~~a~~l~~~G~~V~~~~r 33 (257)
T 1fjh_A 1 MSIIVISGC-ATG--IGAATRKVLEAAGHQIVGIDI 33 (257)
T ss_dssp CCEEEEETT-TSH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCC-CCH--HHHHHHHHHHHCCCEEEEEeC
Confidence 456666644 342 356899999999999998764
No 268
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=33.52 E-value=72 Score=27.42 Aligned_cols=39 Identities=13% Similarity=0.071 Sum_probs=25.5
Q ss_pred CCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 1 MEEKPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 1 ~~~~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|....+.+++++. |+.|-+ -.++++.|+++|++|+++.-
T Consensus 1 m~~~~~~~~vlVT--Gasggi--G~~~a~~l~~~G~~V~~~~r 39 (244)
T 1cyd_A 1 MKLNFSGLRALVT--GAGKGI--GRDTVKALHASGAKVVAVTR 39 (244)
T ss_dssp --CCCTTCEEEEE--STTSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CccCCCCCEEEEe--CCCchH--HHHHHHHHHHCCCEEEEEeC
Confidence 3334445565554 444444 45789999999999988875
No 269
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=33.45 E-value=29 Score=31.77 Aligned_cols=34 Identities=21% Similarity=0.150 Sum_probs=26.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
+..|||+|+..|..| ..+|..|.+.||+|+++..
T Consensus 28 ~~~~~I~iIG~G~mG-----~~~a~~l~~~g~~V~~~~~ 61 (316)
T 2uyy_A 28 PTDKKIGFLGLGLMG-----SGIVSNLLKMGHTVTVWNR 61 (316)
T ss_dssp CCSSCEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCCCeEEEEcccHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 346899999876655 3578889999999988765
No 270
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=33.34 E-value=33 Score=30.96 Aligned_cols=33 Identities=21% Similarity=0.046 Sum_probs=24.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
|+|+++ |+.|.+- ..+++.|+++||+|+.++-.
T Consensus 3 ~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~ 35 (307)
T 2gas_A 3 NKILIL--GPTGAIG--RHIVWASIKAGNPTYALVRK 35 (307)
T ss_dssp CCEEEE--STTSTTH--HHHHHHHHHHTCCEEEEECC
T ss_pred cEEEEE--CCCchHH--HHHHHHHHhCCCcEEEEECC
Confidence 466665 4556553 56789999999999998764
No 271
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=33.25 E-value=59 Score=27.50 Aligned_cols=38 Identities=21% Similarity=0.142 Sum_probs=27.4
Q ss_pred CCCEEEEEcCCCccCHHHH-HHHHHHHHhCCCEEEEEeC
Q 011832 6 KSPHILIFPLPCQSHMNSM-LKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~-l~La~~L~~rGH~Vt~~~~ 43 (476)
+.|||+++-....|+..-+ -.+++.|.+.|++|.++.-
T Consensus 5 ~mmkilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l 43 (211)
T 1ydg_A 5 APVKLAIVFYSSTGTGYAMAQEAAEAGRAAGAEVRLLKV 43 (211)
T ss_dssp CCCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCeEEEEEECCCChHHHHHHHHHHHHhcCCCEEEEEec
Confidence 4678988876557776554 4456777778999988765
No 272
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=33.23 E-value=79 Score=25.09 Aligned_cols=97 Identities=13% Similarity=0.200 Sum_probs=57.0
Q ss_pred EEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchhhhhhcccccccccCCCCeeEEecCCCCCCCCCCCCCcHHHHH
Q 011832 11 LIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHNHERLIRYTDIHDRFLQYSEFQFKTISDGLPADHPRAGDQLMEMF 90 (476)
Q Consensus 11 l~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~ 90 (476)
++++.. ..+-.-++.+|+.|.+.|+++ +++....+.+.+.+ +....+. ..+++. +
T Consensus 27 vliSv~-d~dK~~l~~~a~~l~~lGf~i--~AT~GTa~~L~~~G-----------i~v~~v~-k~~egg-~--------- 81 (143)
T 2yvq_A 27 ILIGIQ-QSFRPRFLGVAEQLHNEGFKL--FATEATSDWLNANN-----------VPATPVA-WPSQEG-Q--------- 81 (143)
T ss_dssp EEEECC-GGGHHHHHHHHHHHHTTTCEE--EEEHHHHHHHHHTT-----------CCCEEEC-CGGGC------------
T ss_pred EEEEec-ccchHHHHHHHHHHHHCCCEE--EECchHHHHHHHcC-----------CeEEEEE-eccCCC-c---------
Confidence 455533 345677999999999999974 34435555554433 2222221 011110 0
Q ss_pred HHHHhhchHHHHHHHhcCCCCceEEEECCCc--------chHHHHHHHcCCCeEEE
Q 011832 91 DSLSLNTRPLLKQMLIDTSPPVSCIIGDACM--------EFVVDVATELEIPVIHF 138 (476)
Q Consensus 91 ~~~~~~~~~~l~~ll~~~~~~~DlvI~D~~~--------~~~~~vA~~l~iP~i~~ 138 (476)
....+.+.+++++. +.|+||...-. +...-.|-.++||++.-
T Consensus 82 ----~~~~~~i~d~i~~g--~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T~ 131 (143)
T 2yvq_A 82 ----NPSLSSIRKLIRDG--SIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLTN 131 (143)
T ss_dssp -------CBCHHHHHHTT--SCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEECS
T ss_pred ----ccccccHHHHHHCC--CceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEcC
Confidence 00114578888887 89999976543 12345688899999874
No 273
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=33.07 E-value=36 Score=31.69 Aligned_cols=36 Identities=17% Similarity=0.199 Sum_probs=28.9
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 4 KPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 4 ~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
|++..+|+|+-.|..| +.+|..|+++|++|+++-..
T Consensus 3 m~~~~dVvVIG~Gi~G-----ls~A~~La~~G~~V~vle~~ 38 (363)
T 1c0p_A 3 MHSQKRVVVLGSGVIG-----LSSALILARKGYSVHILARD 38 (363)
T ss_dssp CCCSCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCCEEEECCCHHH-----HHHHHHHHhCCCEEEEEecc
Confidence 4456789999877444 78899999999999999753
No 274
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=33.06 E-value=2.7e+02 Score=24.99 Aligned_cols=107 Identities=14% Similarity=0.175 Sum_probs=61.7
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCC-cchhhhhhcccccccccCCCCeeEEecCCCCCCCCC
Q 011832 4 KPKSPHILIFPLPCQSHMNSMLKLAEIFGLA--GLKVTFLNSK-HNHERLIRYTDIHDRFLQYSEFQFKTISDGLPADHP 80 (476)
Q Consensus 4 ~~~~~~il~~~~~~~gH~~p~l~La~~L~~r--GH~Vt~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~ 80 (476)
..+++||+++..+. || -+.+|.+...+. ..+|..+.+. .....+.+.. ++.+..++....
T Consensus 87 ~~~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~----------gIp~~~~~~~~~---- 149 (286)
T 3n0v_A 87 PNHRPKVVIMVSKA-DH--CLNDLLYRQRIGQLGMDVVAVVSNHPDLEPLAHWH----------KIPYYHFALDPK---- 149 (286)
T ss_dssp TTCCCEEEEEESSC-CH--HHHHHHHHHHTTSSCCEEEEEEESSSTTHHHHHHT----------TCCEEECCCBTT----
T ss_pred CCCCcEEEEEEeCC-CC--CHHHHHHHHHCCCCCcEEEEEEeCcHHHHHHHHHc----------CCCEEEeCCCcC----
Confidence 35678999988776 43 344555554332 3677766553 3333333332 255655542110
Q ss_pred CCCCcHHHHHHHHHhhchHHHHHHHhcCCCCceEEEECCCcc-hHHHHHHHcCCCeEEEecC
Q 011832 81 RAGDQLMEMFDSLSLNTRPLLKQMLIDTSPPVSCIIGDACME-FVVDVATELEIPVIHFRAI 141 (476)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~DlvI~D~~~~-~~~~vA~~l~iP~i~~~~~ 141 (476)
+ . ....+.+.+.+++. ++|+||.=.+.. -...+-+.+.-.++-++++
T Consensus 150 ----~-r-------~~~~~~~~~~l~~~--~~Dlivla~y~~il~~~~l~~~~~~~iNiHpS 197 (286)
T 3n0v_A 150 ----D-K-------PGQERKVLQVIEET--GAELVILARYMQVLSPELCRRLDGWAINIHHS 197 (286)
T ss_dssp ----B-H-------HHHHHHHHHHHHHH--TCSEEEESSCCSCCCHHHHHHTTTSEEEEEEC
T ss_pred ----C-H-------HHHHHHHHHHHHhc--CCCEEEecccccccCHHHHhhhcCCeEEeccc
Confidence 0 1 11234567777777 889999887765 5566667777777877664
No 275
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=32.94 E-value=33 Score=29.53 Aligned_cols=33 Identities=12% Similarity=0.162 Sum_probs=23.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
||+++++.++ |- =-.++|+.|+++|++|.++.-
T Consensus 1 Mk~vlVTGas-~g--IG~~~a~~l~~~G~~V~~~~r 33 (230)
T 3guy_A 1 MSLIVITGAS-SG--LGAELAKLYDAEGKATYLTGR 33 (230)
T ss_dssp --CEEEESTT-SH--HHHHHHHHHHHTTCCEEEEES
T ss_pred CCEEEEecCC-ch--HHHHHHHHHHHCCCEEEEEeC
Confidence 5667777444 32 347899999999999988875
No 276
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=32.93 E-value=53 Score=28.83 Aligned_cols=33 Identities=12% Similarity=-0.060 Sum_probs=24.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
-|+++++.++.| --.++|+.|+++|++|.+..-
T Consensus 8 gk~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r 40 (255)
T 4eso_A 8 GKKAIVIGGTHG---MGLATVRRLVEGGAEVLLTGR 40 (255)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 356677755442 346899999999999998875
No 277
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=32.93 E-value=67 Score=28.41 Aligned_cols=34 Identities=6% Similarity=0.022 Sum_probs=25.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
++|+++++.++ |- --.++|+.|+++|++|.+...
T Consensus 25 ~~k~vlITGas-~g--IG~a~a~~l~~~G~~V~~~~~ 58 (272)
T 4e3z_A 25 DTPVVLVTGGS-RG--IGAAVCRLAARQGWRVGVNYA 58 (272)
T ss_dssp CSCEEEETTTT-SH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCC-ch--HHHHHHHHHHHCCCEEEEEcC
Confidence 45777777444 33 357899999999999988754
No 278
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=32.76 E-value=35 Score=28.88 Aligned_cols=30 Identities=7% Similarity=0.129 Sum_probs=24.9
Q ss_pred cccccccccccCchhHHHHHhhCCceeccCCcc
Q 011832 362 HQAVAGFLTHSGWNSTLESIVAGVPMICWPYFA 394 (476)
Q Consensus 362 ~~~~~~~I~HGG~~s~~eal~~GvP~l~iP~~~ 394 (476)
.+++ +|+.||-......- .++|+|-++..+
T Consensus 51 ~~dV--IISRGgta~~lr~~-~~iPVV~I~~s~ 80 (196)
T 2q5c_A 51 EVDA--IISRGATSDYIKKS-VSIPSISIKVTR 80 (196)
T ss_dssp TCSE--EEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CCeE--EEECChHHHHHHHh-CCCCEEEEcCCH
Confidence 3556 99999999999875 579999999855
No 279
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=32.72 E-value=30 Score=31.19 Aligned_cols=31 Identities=10% Similarity=0.054 Sum_probs=25.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|||+|+..|..|. .+|+.|.++||+|+++..
T Consensus 1 m~i~iiG~G~mG~-----~~a~~l~~~g~~V~~~~~ 31 (296)
T 2gf2_A 1 MPVGFIGLGNMGN-----PMAKNLMKHGYPLIIYDV 31 (296)
T ss_dssp CCEEEECCSTTHH-----HHHHHHHHTTCCEEEECS
T ss_pred CeEEEEeccHHHH-----HHHHHHHHCCCEEEEEeC
Confidence 5799998777764 578899999999998765
No 280
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=32.62 E-value=40 Score=31.02 Aligned_cols=35 Identities=20% Similarity=0.245 Sum_probs=24.8
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
.+.|+|+|. |+.|-+ -..|++.|.++||+|+.+.-
T Consensus 25 ~~~~~vlVt--GatG~i--G~~l~~~L~~~g~~V~~~~r 59 (343)
T 2b69_A 25 KDRKRILIT--GGAGFV--GSHLTDKLMMDGHEVTVVDN 59 (343)
T ss_dssp --CCEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEEC
T ss_pred cCCCEEEEE--cCccHH--HHHHHHHHHHCCCEEEEEeC
Confidence 445677665 455544 36789999999999999875
No 281
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=32.55 E-value=29 Score=31.97 Aligned_cols=32 Identities=9% Similarity=0.044 Sum_probs=26.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCC-CEEEEEeC
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLAG-LKVTFLNS 43 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~rG-H~Vt~~~~ 43 (476)
.|||+|+..|..| ..+|..|+++| |+|+++..
T Consensus 24 ~m~IgvIG~G~mG-----~~lA~~L~~~G~~~V~~~dr 56 (317)
T 4ezb_A 24 MTTIAFIGFGEAA-----QSIAGGLGGRNAARLAAYDL 56 (317)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHTTTCSEEEEECG
T ss_pred CCeEEEECccHHH-----HHHHHHHHHcCCCeEEEEeC
Confidence 3789999877655 78899999999 99998875
No 282
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=32.39 E-value=69 Score=26.36 Aligned_cols=31 Identities=16% Similarity=0.203 Sum_probs=26.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCC
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGLAGL 36 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH 36 (476)
++..+|.++. ++.|++--+...++.|.+-|.
T Consensus 10 ~~~P~V~Iim-GS~SD~~v~~~a~~~l~~~gi 40 (173)
T 4grd_A 10 HSAPLVGVLM-GSSSDWDVMKHAVAILQEFGV 40 (173)
T ss_dssp CSSCSEEEEE-SSGGGHHHHHHHHHHHHHTTC
T ss_pred CCCCeEEEEe-CcHhHHHHHHHHHHHHHHcCC
Confidence 4567888887 999999999999999998883
No 283
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=32.35 E-value=66 Score=28.09 Aligned_cols=41 Identities=17% Similarity=0.177 Sum_probs=28.9
Q ss_pred HHHHHHHhcCCCCceEEEECCCcc-------hHHHHHHHcCCCeEEEe
Q 011832 99 PLLKQMLIDTSPPVSCIIGDACME-------FVVDVATELEIPVIHFR 139 (476)
Q Consensus 99 ~~l~~ll~~~~~~~DlvI~D~~~~-------~~~~vA~~l~iP~i~~~ 139 (476)
+.+.+.++....+||+|++|.... -|..+...+++|+|.+.
T Consensus 95 P~ll~al~~L~~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVA 142 (237)
T 3goc_A 95 PTVLAALDALPCPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGVA 142 (237)
T ss_dssp HHHHHHHHTSSSCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEEE
T ss_pred HHHHHHHHhcCCCCCEEEEeCceeecCCCcchhheeeeecCCCEEeee
Confidence 445555565445899999998765 24456677889999984
No 284
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=32.15 E-value=70 Score=28.10 Aligned_cols=37 Identities=19% Similarity=0.318 Sum_probs=27.4
Q ss_pred CEEEEEcCCCcc-----------CHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 8 PHILIFPLPCQS-----------HMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 8 ~~il~~~~~~~g-----------H~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
+||+|+.....+ ...=+....+.|.++|++|+++++.
T Consensus 4 ~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~ 51 (244)
T 3kkl_A 4 KRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSET 51 (244)
T ss_dssp CEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 478888765322 2244777788999999999999974
No 285
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=32.09 E-value=16 Score=33.66 Aligned_cols=38 Identities=16% Similarity=0.051 Sum_probs=27.1
Q ss_pred CCCC-CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 1 MEEK-PKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 1 ~~~~-~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|..| ++.++|+++-.+..| +..|..|+++||+|+++-.
T Consensus 1 M~~~~~~~~~vvIIG~G~aG-----l~~A~~l~~~g~~v~lie~ 39 (333)
T 1vdc_A 1 MNGLETHNTRLCIVGSGPAA-----HTAAIYAARAELKPLLFEG 39 (333)
T ss_dssp ---CEEEEEEEEEECCSHHH-----HHHHHHHHHTTCCCEEECC
T ss_pred CCCCCCCCCCEEEECcCHHH-----HHHHHHHHHCCCeEEEEec
Confidence 4443 345688888866444 7889999999999999975
No 286
>3se7_A VANA; alpha-beta structure, D-alanine-D-lactate ligase, ligase; HET: ATP; 3.07A {}
Probab=32.07 E-value=28 Score=32.47 Aligned_cols=38 Identities=18% Similarity=0.089 Sum_probs=29.9
Q ss_pred CCCEEEEEcCCCccC-----HHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 6 KSPHILIFPLPCQSH-----MNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 6 ~~~~il~~~~~~~gH-----~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
++|||+++.. +.|. +....++++.|.+.||+|+.+...
T Consensus 2 ~~~~v~vl~G-G~s~e~~vSl~sa~~v~~al~~~g~~v~~i~~~ 44 (346)
T 3se7_A 2 SHMKIGIIFG-GVSEEHDISVKSAREVATHLGTGVFEPFYLGIT 44 (346)
T ss_dssp CCEEEEEEEE-CSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CCCEEEEEee-ecCCCccHHHHHHHHHHHHhcccCCEEEEEEEC
Confidence 5789999884 4443 456788899999999999998864
No 287
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=32.06 E-value=28 Score=29.90 Aligned_cols=33 Identities=21% Similarity=0.143 Sum_probs=24.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
+.|||+|+..|..| ..+++.|.++||+|+++..
T Consensus 27 ~~~~I~iiG~G~~G-----~~la~~l~~~g~~V~~~~r 59 (215)
T 2vns_A 27 EAPKVGILGSGDFA-----RSLATRLVGSGFKVVVGSR 59 (215)
T ss_dssp --CCEEEECCSHHH-----HHHHHHHHHTTCCEEEEES
T ss_pred CCCEEEEEccCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 45789998644333 4678899999999998765
No 288
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=31.99 E-value=31 Score=26.67 Aligned_cols=35 Identities=20% Similarity=0.186 Sum_probs=24.5
Q ss_pred HHHhcCCCCceEEEECCCcc--hHHHHHHHc---CCCeEEEe
Q 011832 103 QMLIDTSPPVSCIIGDACME--FVVDVATEL---EIPVIHFR 139 (476)
Q Consensus 103 ~ll~~~~~~~DlvI~D~~~~--~~~~vA~~l---~iP~i~~~ 139 (476)
+++++. +||+||.|...+ -+..+++.+ ++|+|.++
T Consensus 47 ~~~~~~--~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 47 DIARKG--QFDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp HHHHHC--CSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred HHHHhC--CCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 344555 899999999887 556665554 68877653
No 289
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=31.98 E-value=2.1e+02 Score=26.47 Aligned_cols=110 Identities=12% Similarity=0.015 Sum_probs=56.0
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHHhc-CCceEEEECCCCCCCchhhHHHHHHhhcCCc-eEeeccChHHHhhcccccc
Q 011832 290 SVLYVSFGSITLLKREQLIEFWHGLVDS-KQRFLWVIRPDSVIGEGDALAELVEGTKERG-LLVSWVPQEEVLAHQAVAG 367 (476)
Q Consensus 290 ~~I~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv-~~~~~~pq~~lL~~~~~~~ 367 (476)
++-+|..|.+.. ..++.++... +..++.+.+.+ ++-.+...+.. ...-+-...++|..+++.+
T Consensus 7 rigiIG~G~~g~------~~~~~~l~~~~~~~l~av~d~~---------~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~ 71 (359)
T 3m2t_A 7 KVGLVGIGAQMQ------ENLLPSLLQMQDIRIVAACDSD---------LERARRVHRFISDIPVLDNVPAMLNQVPLDA 71 (359)
T ss_dssp EEEEECCSHHHH------HTHHHHHHTCTTEEEEEEECSS---------HHHHGGGGGTSCSCCEESSHHHHHHHSCCSE
T ss_pred eEEEECCCHHHH------HHHHHHHHhCCCcEEEEEEcCC---------HHHHHHHHHhcCCCcccCCHHHHhcCCCCCE
Confidence 477788887641 1255666665 34666566543 11111122211 1122345678888775544
Q ss_pred cccccCch----hHHHHHhhCCceecc-CCcc--cchhhHHHHHhhhcceeecc
Q 011832 368 FLTHSGWN----STLESIVAGVPMICW-PYFA--DQQINSRFVSEVWNLGLDMK 414 (476)
Q Consensus 368 ~I~HGG~~----s~~eal~~GvP~l~i-P~~~--DQ~~na~~v~~~~G~G~~~~ 414 (476)
++-..... -+.+|+.+|+++++= |+.. ++-.-...++++.|+=+.+.
T Consensus 72 V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~~v~ 125 (359)
T 3m2t_A 72 VVMAGPPQLHFEMGLLAMSKGVNVFVEKPPCATLEELETLIDAARRSDVVSGVG 125 (359)
T ss_dssp EEECSCHHHHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHHTCCEEEC
T ss_pred EEEcCCcHHHHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHHcCCEEEEE
Confidence 55444333 356778888887763 5433 34333333435555544443
No 290
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=31.86 E-value=31 Score=33.96 Aligned_cols=33 Identities=18% Similarity=0.093 Sum_probs=27.5
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
-.|||+|+..|..| +.+|..|+++||+|+++..
T Consensus 7 ~~~~I~VIG~G~vG-----~~lA~~la~~G~~V~~~d~ 39 (478)
T 2y0c_A 7 GSMNLTIIGSGSVG-----LVTGACLADIGHDVFCLDV 39 (478)
T ss_dssp CCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCceEEEECcCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 46999999776555 5689999999999999875
No 291
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=31.86 E-value=43 Score=29.10 Aligned_cols=29 Identities=17% Similarity=0.109 Sum_probs=24.6
Q ss_pred ccccccccccCchhHHHHHhhCCceeccCCcc
Q 011832 363 QAVAGFLTHSGWNSTLESIVAGVPMICWPYFA 394 (476)
Q Consensus 363 ~~~~~~I~HGG~~s~~eal~~GvP~l~iP~~~ 394 (476)
+++ +|+.||-......- .++|+|-++..+
T Consensus 64 ~dV--IISRGgta~~Lr~~-~~iPVV~I~vs~ 92 (225)
T 2pju_A 64 CDA--IIAAGSNGAYLKSR-LSVPVILIKPSG 92 (225)
T ss_dssp CSE--EEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CeE--EEeCChHHHHHHhh-CCCCEEEecCCH
Confidence 666 99999999999875 579999999854
No 292
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=31.80 E-value=31 Score=33.61 Aligned_cols=32 Identities=19% Similarity=0.237 Sum_probs=26.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
|||+|+..|..| ..+|..|+++||+|+++...
T Consensus 3 mkI~VIG~G~vG-----~~lA~~La~~G~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVG-----LVSATCFAELGANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhcCCEEEEEECC
Confidence 799999765444 67899999999999988763
No 293
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=31.66 E-value=26 Score=31.83 Aligned_cols=33 Identities=12% Similarity=0.084 Sum_probs=26.3
Q ss_pred HHhhcccccccccccCchhHHHHHhh----CCceeccCC
Q 011832 358 EVLAHQAVAGFLTHSGWNSTLESIVA----GVPMICWPY 392 (476)
Q Consensus 358 ~lL~~~~~~~~I~HGG~~s~~eal~~----GvP~l~iP~ 392 (476)
++-..+++ +|.-||=||+.+++.. ++|+++++.
T Consensus 59 ~~~~~~D~--vi~~GGDGT~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 59 EIGQQADL--AVVVGGDGNMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp HHHHHCSE--EEECSCHHHHHHHHHHHTTSSCEEEEBCS
T ss_pred hcccCCCE--EEEEcCcHHHHHHHHHhhcCCCCEEEEEC
Confidence 34445676 9999999999999853 789999973
No 294
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=31.66 E-value=27 Score=32.33 Aligned_cols=34 Identities=12% Similarity=0.173 Sum_probs=27.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
+..+|+|+-.|..| +..|..|+++|++|+++-..
T Consensus 3 ~~~dvvIIG~G~~G-----l~~A~~La~~G~~V~vlE~~ 36 (369)
T 3dme_A 3 TDIDCIVIGAGVVG-----LAIARALAAGGHEVLVAEAA 36 (369)
T ss_dssp CCEEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred CcCCEEEECCCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 45689998876544 88899999999999999864
No 295
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=31.64 E-value=60 Score=26.48 Aligned_cols=31 Identities=6% Similarity=0.109 Sum_probs=25.1
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCE
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFGLAGLK 37 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~ 37 (476)
++++|++++ ++.|++--+...++.|..-|..
T Consensus 2 ~~~~V~Iim-gs~SD~~v~~~a~~~l~~~gi~ 32 (163)
T 3ors_A 2 NAMKVAVIM-GSSSDWKIMQESCNMLDYFEIP 32 (163)
T ss_dssp -CCCEEEEE-SCGGGHHHHHHHHHHHHHTTCC
T ss_pred CCCeEEEEE-CcHHHHHHHHHHHHHHHHcCCC
Confidence 457788887 8999999999999999888743
No 296
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=31.63 E-value=37 Score=30.08 Aligned_cols=34 Identities=15% Similarity=-0.001 Sum_probs=25.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
.|+++++.++.| =-.++|+.|+++|++|.++.-.
T Consensus 27 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~ 60 (260)
T 3gem_A 27 SAPILITGASQR---VGLHCALRLLEHGHRVIISYRT 60 (260)
T ss_dssp CCCEEESSTTSH---HHHHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 356677744433 3568999999999999998763
No 297
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=31.62 E-value=45 Score=30.54 Aligned_cols=35 Identities=9% Similarity=0.107 Sum_probs=25.7
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
+.|||+|. |+.|.+ -..|++.|+++||+|+.++-.
T Consensus 12 ~~M~ilVt--GatG~i--G~~l~~~L~~~g~~V~~~~r~ 46 (342)
T 2x4g_A 12 AHVKYAVL--GATGLL--GHHAARAIRAAGHDLVLIHRP 46 (342)
T ss_dssp CCCEEEEE--STTSHH--HHHHHHHHHHTTCEEEEEECT
T ss_pred cCCEEEEE--CCCcHH--HHHHHHHHHHCCCEEEEEecC
Confidence 34777776 445544 367889999999999998753
No 298
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=31.62 E-value=52 Score=27.93 Aligned_cols=33 Identities=6% Similarity=0.099 Sum_probs=23.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHH-hCCCEEEEEeC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFG-LAGLKVTFLNS 43 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~-~rGH~Vt~~~~ 43 (476)
||.++++ |+.|-+ -..+++.|+ ++||+|+.+.-
T Consensus 5 mk~vlVt-Gasg~i--G~~~~~~l~~~~g~~V~~~~r 38 (221)
T 3r6d_A 5 YXYITIL-GAAGQI--AQXLTATLLTYTDMHITLYGR 38 (221)
T ss_dssp CSEEEEE-STTSHH--HHHHHHHHHHHCCCEEEEEES
T ss_pred EEEEEEE-eCCcHH--HHHHHHHHHhcCCceEEEEec
Confidence 4544444 444444 478899999 89999999875
No 299
>1r8j_A KAIA; circadian clock protein; 2.03A {Synechococcus elongatus pcc 7942} SCOP: a.186.1.1 c.23.1.5 PDB: 1m2e_A 1m2f_A
Probab=31.62 E-value=1.8e+02 Score=25.86 Aligned_cols=63 Identities=11% Similarity=0.102 Sum_probs=44.6
Q ss_pred chhhHHHHHhhhc-ceeeccc-------ccCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 011832 396 QQINSRFVSEVWN-LGLDMKD-------VCDRNVVEKMVNDLMVERKEEFMRAADRMATMARTTANEGGPSYCNLDRLID 467 (476)
Q Consensus 396 Q~~na~~v~~~~G-~G~~~~~-------~~~~~~l~~~i~~~l~~~~~~y~~~a~~~~~~~~~~~~~~g~~~~~~~~~i~ 467 (476)
|..-+.++.|++| +|+...+ ++++++=.+-++.+-. .|| +.+.+++.++..-.+++++|++
T Consensus 158 Q~rL~~KLkERLGYLGVYYKR~p~~F~rnl~~~ErqeLl~~Lk~----~YR-------~IlL~YF~~d~~~Nq~ID~FVN 226 (289)
T 1r8j_A 158 QRDLAQRLQERLGYLGVYYKRDPDRFLRNLPAYESQKLHQAMQT----SYR-------EIVLSYFSPNSNLNQSIDNFVN 226 (289)
T ss_dssp HHHHHHHHHHHHEEEEEEECCCGGGSTTTSCHHHHHHHHHHHHH----HHH-------HHHHHHTSTTCCHHHHHHHHHH
T ss_pred HhhHHHHHHHHhcccceeeeeCHHHHHHhCCHHHHHHHHHHHHH----HHH-------HHHHHHhCCchHHHHHHHHHHH
Confidence 4556788889999 7888862 4666665555554433 455 4667778888888899999998
Q ss_pred HH
Q 011832 468 DI 469 (476)
Q Consensus 468 ~~ 469 (476)
..
T Consensus 227 ~a 228 (289)
T 1r8j_A 227 MA 228 (289)
T ss_dssp HH
T ss_pred HH
Confidence 74
No 300
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=31.57 E-value=2.1e+02 Score=23.38 Aligned_cols=141 Identities=14% Similarity=0.151 Sum_probs=76.1
Q ss_pred CeEEEEEeccccccCHHHHHHHHHHHHhcCCceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccChHHHhhccccccc
Q 011832 289 RSVLYVSFGSITLLKREQLIEFWHGLVDSKQRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQEEVLAHQAVAGF 368 (476)
Q Consensus 289 ~~~I~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ 368 (476)
+|.|-|-+||.. +-...++....++.++..+=..+-.-. ...+.+.++.+...+ ...++ |
T Consensus 11 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaH--R~p~~l~~~~~~a~~--------------~g~~V--i 70 (170)
T 1xmp_A 11 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSAH--RTPDYMFEYAETARE--------------RGLKV--I 70 (170)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTT--TSHHHHHHHHHHTTT--------------TTCCE--E
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEecc--CCHHHHHHHHHHHHh--------------CCCcE--E
Confidence 456777788775 567778888889988876544433221 111122222111110 11334 8
Q ss_pred ccccCchhHHHHHhh---CCceeccCCccc--chhhHH-HHHhh--hccee---ecc--cccCHHHHHHHHHHHHhHhHH
Q 011832 369 LTHSGWNSTLESIVA---GVPMICWPYFAD--QQINSR-FVSEV--WNLGL---DMK--DVCDRNVVEKMVNDLMVERKE 435 (476)
Q Consensus 369 I~HGG~~s~~eal~~---GvP~l~iP~~~D--Q~~na~-~v~~~--~G~G~---~~~--~~~~~~~l~~~i~~~l~~~~~ 435 (476)
|.=+|...-+-.+.+ -+|+|.+|.... .-..+. -. -+ .|+.+ .++ ...++.-++..|..+ .| +
T Consensus 71 Ia~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~daLlSi-vqmP~GvpVatV~I~~a~~~nAallAaqIla~-~d--~ 146 (170)
T 1xmp_A 71 IAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLLSI-VQMPGGVPVATVAIGKAGSTNAGLLAAQILGS-FH--D 146 (170)
T ss_dssp EEEEESSCCHHHHHHTTCCSCEEEEEECCTTTTTHHHHHHH-HCCCTTCCCEECCSSHHHHHHHHHHHHHHHHT-TC--H
T ss_pred EEECCchhhhHHHHHhccCCCEEEeeCCCCCCCcHHHHHHH-hcCCCCCeeEEEecCCcchHHHHHHHHHHHcc-CC--H
Confidence 877775544444333 469999998543 111111 12 12 35542 122 235556666555432 34 6
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 011832 436 EFMRAADRMATMARTTAN 453 (476)
Q Consensus 436 ~y~~~a~~~~~~~~~~~~ 453 (476)
..+++.+.+++..++.+.
T Consensus 147 ~l~~kl~~~r~~~~~~v~ 164 (170)
T 1xmp_A 147 DIHDALELRREAIEKDVR 164 (170)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 899999988888776543
No 301
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=31.56 E-value=54 Score=30.20 Aligned_cols=36 Identities=11% Similarity=0.071 Sum_probs=26.9
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHN 46 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~ 46 (476)
+.|||+|+..+..+ ....+.|.++||+|..+.+.+.
T Consensus 3 ~mmrIvf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~pd 38 (317)
T 3rfo_A 3 AMIKVVFMGTPDFS-----VPVLRRLIEDGYDVIGVVTQPD 38 (317)
T ss_dssp TTSEEEEECCSTTH-----HHHHHHHHHTTCEEEEEECCCC
T ss_pred CceEEEEEeCCHHH-----HHHHHHHHHCCCcEEEEEeCCC
Confidence 45899999888654 3456778889999887777543
No 302
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=31.47 E-value=49 Score=26.09 Aligned_cols=36 Identities=11% Similarity=0.014 Sum_probs=25.3
Q ss_pred EEEEEc-CCCccCHHH--HHHHHHHHHhCCCEEEEEeCC
Q 011832 9 HILIFP-LPCQSHMNS--MLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 9 ~il~~~-~~~~gH~~p--~l~La~~L~~rGH~Vt~~~~~ 44 (476)
|++|+- .+-+|+... .+.+|..++..||+|.++-..
T Consensus 7 k~~ivv~~~P~g~~~~~~al~~a~a~~a~~~~v~Vff~~ 45 (136)
T 2hy5_B 7 KFMYLNRKAPYGTIYAWEALEVVLIGAAFDQDVCVLFLD 45 (136)
T ss_dssp EEEEEECSCTTTSSHHHHHHHHHHHHGGGCCEEEEEECG
T ss_pred EEEEEEeCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEEh
Confidence 365544 344465444 578899999999999998763
No 303
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=31.42 E-value=52 Score=28.59 Aligned_cols=23 Identities=17% Similarity=0.203 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHhCCCEEEEEeCC
Q 011832 22 NSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 22 ~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
.--.++|+.|+++|++|+++..+
T Consensus 35 ~iG~aiA~~~~~~Ga~V~l~~~~ 57 (226)
T 1u7z_A 35 KMGFAIAAAAARRGANVTLVSGP 57 (226)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECS
T ss_pred HHHHHHHHHHHHCCCEEEEEECC
Confidence 34578999999999999998763
No 304
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=31.39 E-value=48 Score=28.94 Aligned_cols=32 Identities=16% Similarity=0.184 Sum_probs=23.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 9 HILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 9 ~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|.++++ |+.|-+ -.++++.|+++|++|.++.-
T Consensus 14 k~vlIt-Gasggi--G~~la~~l~~~G~~V~~~~r 45 (260)
T 3awd_A 14 RVAIVT-GGAQNI--GLACVTALAEAGARVIIADL 45 (260)
T ss_dssp CEEEEE-TTTSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEe-CCCchH--HHHHHHHHHHCCCEEEEEeC
Confidence 455555 333333 46899999999999998875
No 305
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=31.34 E-value=1.8e+02 Score=22.40 Aligned_cols=107 Identities=9% Similarity=-0.025 Sum_probs=60.5
Q ss_pred ccCHHHHHHHHHHHHhcCCceEEEECCCCCCCchhhH-HHHHHhhcCCceEeec-cChHHHhhcccccccccccCchhHH
Q 011832 301 LLKREQLIEFWHGLVDSKQRFLWVIRPDSVIGEGDAL-AELVEGTKERGLLVSW-VPQEEVLAHQAVAGFLTHSGWNSTL 378 (476)
Q Consensus 301 ~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~l-~~~~~~~~~nv~~~~~-~pq~~lL~~~~~~~~I~HGG~~s~~ 378 (476)
..++.....+...++..++.+....... +. ..+.. .+..+.+.++ +|.. .|. .+.
T Consensus 21 dd~~~~~~~l~~~L~~~g~~v~~~~~~~-------~a~~~l~~-~~~dlvi~D~~l~~~--------------~g~-~~~ 77 (153)
T 3hv2_A 21 DSQEVILQRLQQLLSPLPYTLHFARDAT-------QALQLLAS-REVDLVISAAHLPQM--------------DGP-TLL 77 (153)
T ss_dssp CSCHHHHHHHHHHHTTSSCEEEEESSHH-------HHHHHHHH-SCCSEEEEESCCSSS--------------CHH-HHH
T ss_pred CCCHHHHHHHHHHhcccCcEEEEECCHH-------HHHHHHHc-CCCCEEEEeCCCCcC--------------cHH-HHH
Confidence 3456666778888888887765443211 22 22222 2334444443 1211 111 122
Q ss_pred HH---HhhCCceeccCCcccchhhHHHHHhhhc-ceeecccccCHHHHHHHHHHHHhH
Q 011832 379 ES---IVAGVPMICWPYFADQQINSRFVSEVWN-LGLDMKDVCDRNVVEKMVNDLMVE 432 (476)
Q Consensus 379 ea---l~~GvP~l~iP~~~DQ~~na~~v~~~~G-~G~~~~~~~~~~~l~~~i~~~l~~ 432 (476)
+. ....+|+|++--..|...-...+ +.| +--.+.+.++.++|.++|++++..
T Consensus 78 ~~l~~~~~~~~ii~~s~~~~~~~~~~~~--~~g~~~~~l~KP~~~~~l~~~i~~~l~~ 133 (153)
T 3hv2_A 78 ARIHQQYPSTTRILLTGDPDLKLIAKAI--NEGEIYRYLSKPWDDQELLLALRQALEH 133 (153)
T ss_dssp HHHHHHCTTSEEEEECCCCCHHHHHHHH--HTTCCSEEECSSCCHHHHHHHHHHHHHH
T ss_pred HHHHhHCCCCeEEEEECCCCHHHHHHHH--hCCCcceEEeCCCCHHHHHHHHHHHHHH
Confidence 22 23478888776655544433333 347 666777789999999999999874
No 306
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=31.24 E-value=52 Score=30.92 Aligned_cols=34 Identities=9% Similarity=0.046 Sum_probs=25.2
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHH-hCCCEEEEEeC
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFG-LAGLKVTFLNS 43 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~-~rGH~Vt~~~~ 43 (476)
+.|+|+|. |+.|.+ -..|++.|+ ++||+|+.+.-
T Consensus 1 s~m~vlVT--GatG~i--G~~l~~~L~~~~g~~V~~~~r 35 (397)
T 1gy8_A 1 SHMRVLVC--GGAGYI--GSHFVRALLRDTNHSVVIVDS 35 (397)
T ss_dssp CCCEEEEE--TTTSHH--HHHHHHHHHHHCCCEEEEEEC
T ss_pred CCCEEEEE--CCCCHH--HHHHHHHHHHhCCCEEEEEec
Confidence 35777665 455555 357899999 99999999874
No 307
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=31.18 E-value=52 Score=30.28 Aligned_cols=35 Identities=17% Similarity=0.010 Sum_probs=26.3
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
+.|+|+|+ |+.|.+- ..|++.|.++||+|+.+.-.
T Consensus 24 ~~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 58 (351)
T 3ruf_A 24 SPKTWLIT--GVAGFIG--SNLLEKLLKLNQVVIGLDNF 58 (351)
T ss_dssp SCCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEECC
T ss_pred CCCeEEEE--CCCcHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 45677765 4556553 57899999999999998863
No 308
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=31.09 E-value=45 Score=29.67 Aligned_cols=32 Identities=13% Similarity=0.121 Sum_probs=25.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
|||+++. + |.+- ..|++.|.++||+|+.++-.
T Consensus 6 ~~ilVtG--a-G~iG--~~l~~~L~~~g~~V~~~~r~ 37 (286)
T 3ius_A 6 GTLLSFG--H-GYTA--RVLSRALAPQGWRIIGTSRN 37 (286)
T ss_dssp CEEEEET--C-CHHH--HHHHHHHGGGTCEEEEEESC
T ss_pred CcEEEEC--C-cHHH--HHHHHHHHHCCCEEEEEEcC
Confidence 6888874 5 6554 47899999999999999864
No 309
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=30.89 E-value=14 Score=33.74 Aligned_cols=32 Identities=9% Similarity=0.007 Sum_probs=26.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
|||+|+..|+.|- .+|..|.++||+|+++...
T Consensus 3 mkI~iiGaGa~G~-----~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 3 LSVAIIGPGAVGT-----TIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp CCEEEECCSHHHH-----HHHHHHHHHCTTCEEEESS
T ss_pred cEEEEECCCHHHH-----HHHHHHHHCCCeEEEEEec
Confidence 7899998777764 6788899999999999864
No 310
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=30.88 E-value=37 Score=31.73 Aligned_cols=34 Identities=12% Similarity=0.151 Sum_probs=25.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhC-CCEEEEEeCC
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLA-GLKVTFLNSK 44 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~r-GH~Vt~~~~~ 44 (476)
.|+|+|+ |+.|.+- ..|++.|.++ ||+|+.+.-.
T Consensus 24 ~~~vlVt--GatG~iG--~~l~~~L~~~~g~~V~~~~r~ 58 (372)
T 3slg_A 24 AKKVLIL--GVNGFIG--HHLSKRILETTDWEVFGMDMQ 58 (372)
T ss_dssp CCEEEEE--SCSSHHH--HHHHHHHHHHSSCEEEEEESC
T ss_pred CCEEEEE--CCCChHH--HHHHHHHHhCCCCEEEEEeCC
Confidence 4677765 4555554 5788999998 9999999863
No 311
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=30.82 E-value=54 Score=29.16 Aligned_cols=34 Identities=21% Similarity=0.031 Sum_probs=25.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
++|+++++.++ |-+ -.++|+.|+++|++|.++.-
T Consensus 4 ~~k~vlVTGas-~gI--G~~~a~~l~~~G~~V~~~~r 37 (281)
T 3m1a_A 4 SAKVWLVTGAS-SGF--GRAIAEAAVAAGDTVIGTAR 37 (281)
T ss_dssp CCCEEEETTTT-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCcEEEEECCC-ChH--HHHHHHHHHHCCCEEEEEeC
Confidence 34677777444 433 45899999999999988875
No 312
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=30.81 E-value=43 Score=30.37 Aligned_cols=33 Identities=15% Similarity=-0.009 Sum_probs=23.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
.++|+ ++ |+.|-+ -..|++.|+++||+|+.+.-
T Consensus 12 ~~~vl-VT-GatG~i--G~~l~~~L~~~G~~V~~~~r 44 (321)
T 2pk3_A 12 SMRAL-IT-GVAGFV--GKYLANHLTEQNVEVFGTSR 44 (321)
T ss_dssp -CEEE-EE-TTTSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred cceEE-EE-CCCChH--HHHHHHHHHHCCCEEEEEec
Confidence 34544 44 455555 36789999999999999875
No 313
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=30.76 E-value=2.3e+02 Score=25.71 Aligned_cols=108 Identities=12% Similarity=0.003 Sum_probs=58.6
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHHhc-CCceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccChHHHhhccccccc
Q 011832 290 SVLYVSFGSITLLKREQLIEFWHGLVDS-KQRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQEEVLAHQAVAGF 368 (476)
Q Consensus 290 ~~I~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ 368 (476)
.+.+|..|.+. ...+.++... +..++.+.+.+ .+....+.++. ++. +-...+++..+++.++
T Consensus 5 ~vgiiG~G~~g-------~~~~~~l~~~~~~~l~av~d~~-----~~~~~~~~~~~--~~~---~~~~~~~l~~~~~D~V 67 (331)
T 4hkt_A 5 RFGLLGAGRIG-------KVHAKAVSGNADARLVAVADAF-----PAAAEAIAGAY--GCE---VRTIDAIEAAADIDAV 67 (331)
T ss_dssp EEEEECCSHHH-------HHHHHHHHHCTTEEEEEEECSS-----HHHHHHHHHHT--TCE---ECCHHHHHHCTTCCEE
T ss_pred EEEEECCCHHH-------HHHHHHHhhCCCcEEEEEECCC-----HHHHHHHHHHh--CCC---cCCHHHHhcCCCCCEE
Confidence 36677777664 2355566655 44555555533 11223333322 222 5566788885444335
Q ss_pred ccccC----chhHHHHHhhCCceecc-CCc--ccchhhHHHHHhhhcceeecc
Q 011832 369 LTHSG----WNSTLESIVAGVPMICW-PYF--ADQQINSRFVSEVWNLGLDMK 414 (476)
Q Consensus 369 I~HGG----~~s~~eal~~GvP~l~i-P~~--~DQ~~na~~v~~~~G~G~~~~ 414 (476)
+---. .--+.+++.+|+++++= |+. .++-.-...++++.|+-+.+.
T Consensus 68 ~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~ 120 (331)
T 4hkt_A 68 VICTPTDTHADLIERFARAGKAIFCEKPIDLDAERVRACLKVVSDTKAKLMVG 120 (331)
T ss_dssp EECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEEC
T ss_pred EEeCCchhHHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEc
Confidence 53222 33567889999998873 543 344444444446667666554
No 314
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=30.70 E-value=86 Score=23.67 Aligned_cols=40 Identities=8% Similarity=0.078 Sum_probs=31.5
Q ss_pred CCCCCEEEEEcCCCccCHHH-HHHHHHHHHhCCCEEEEEeC
Q 011832 4 KPKSPHILIFPLPCQSHMNS-MLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 4 ~~~~~~il~~~~~~~gH~~p-~l~La~~L~~rGH~Vt~~~~ 43 (476)
..+++||+++|..+.|.-.- ...+-+.+.++|.++.+-..
T Consensus 18 ~~~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~~ 58 (113)
T 1tvm_A 18 QGSKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQC 58 (113)
T ss_dssp SCSSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred cccccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEEe
Confidence 34567899999999998774 67888888899998765543
No 315
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=30.69 E-value=73 Score=26.16 Aligned_cols=30 Identities=13% Similarity=0.133 Sum_probs=24.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCE
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLAGLK 37 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~rGH~ 37 (476)
+++|++++ ++.|++--+...++.|..-|..
T Consensus 6 ~~~V~Iim-gS~SD~~v~~~a~~~l~~~gi~ 35 (169)
T 3trh_A 6 KIFVAILM-GSDSDLSTMETAFTELKSLGIP 35 (169)
T ss_dssp CCEEEEEE-SCGGGHHHHHHHHHHHHHTTCC
T ss_pred CCcEEEEE-CcHHhHHHHHHHHHHHHHcCCC
Confidence 45788877 8999999999999999888753
No 316
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=30.64 E-value=68 Score=27.61 Aligned_cols=39 Identities=10% Similarity=0.133 Sum_probs=26.8
Q ss_pred CCCC-EEEEEcCCCccC----HHHHHHHHHHHHhCCCEEEEEeC
Q 011832 5 PKSP-HILIFPLPCQSH----MNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 5 ~~~~-~il~~~~~~~gH----~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
+++| +|.|++....+- ..-...|++.|+++|+.|+.-..
T Consensus 10 ~~~m~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vVsGGg 53 (215)
T 2a33_A 10 KSKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGG 53 (215)
T ss_dssp CCSCSEEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred cCCCCeEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEEECCC
Confidence 4455 599997555432 23467889999999998865444
No 317
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=30.60 E-value=63 Score=29.21 Aligned_cols=32 Identities=16% Similarity=0.101 Sum_probs=23.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 9 HILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 9 ~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|+++++.++ |- =-.++|+.|+++|++|.++.-
T Consensus 32 k~vlVTGas-~g--IG~~la~~l~~~G~~V~~~~r 63 (301)
T 3tjr_A 32 RAAVVTGGA-SG--IGLATATEFARRGARLVLSDV 63 (301)
T ss_dssp CEEEEETTT-SH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-CH--HHHHHHHHHHHCCCEEEEEEC
Confidence 566666444 33 357899999999999988775
No 318
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=30.52 E-value=88 Score=27.42 Aligned_cols=39 Identities=15% Similarity=0.117 Sum_probs=24.8
Q ss_pred CCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 1 MEEKPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 1 ~~~~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|....+.+ .++++ |+.|-+ -.++++.|+++||+|+++.-
T Consensus 1 M~~~l~~k-~vlVT-Gas~gI--G~~ia~~l~~~G~~V~~~~r 39 (260)
T 1nff_A 1 MSGRLTGK-VALVS-GGARGM--GASHVRAMVAEGAKVVFGDI 39 (260)
T ss_dssp -CCTTTTC-EEEEE-TTTSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCCCC-EEEEe-CCCCHH--HHHHHHHHHHCCCEEEEEeC
Confidence 44333334 44555 333433 46789999999999998865
No 319
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=30.49 E-value=38 Score=30.60 Aligned_cols=37 Identities=11% Similarity=0.073 Sum_probs=28.0
Q ss_pred CEEEEEcCCCccC---HHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 8 PHILIFPLPCQSH---MNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 8 ~~il~~~~~~~gH---~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
|||+|+..+.... ......++++|.++||+|.++.+.
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGG
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchh
Confidence 6899999764221 234567999999999999998863
No 320
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=30.33 E-value=47 Score=30.95 Aligned_cols=34 Identities=12% Similarity=0.095 Sum_probs=25.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
+|+|+++ |+.|.+- ..|++.|+++||+|+.++-.
T Consensus 5 ~~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~ 38 (352)
T 1xgk_A 5 KKTIAVV--GATGRQG--ASLIRVAAAVGHHVRAQVHS 38 (352)
T ss_dssp CCCEEEE--STTSHHH--HHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEE--CCCCHHH--HHHHHHHHhCCCEEEEEECC
Confidence 5677766 5555553 56889999999999998753
No 321
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=30.26 E-value=87 Score=23.81 Aligned_cols=39 Identities=15% Similarity=0.249 Sum_probs=26.3
Q ss_pred CCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 1 MEEKPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 1 ~~~~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|..++++++|+++- .+-.-...+.+.|.+.|++|..+..
T Consensus 1 M~~~~~~~~iLivd----d~~~~~~~l~~~L~~~g~~v~~~~~ 39 (142)
T 3cg4_A 1 MSLAEHKGDVMIVD----DDAHVRIAVKTILSDAGFHIISADS 39 (142)
T ss_dssp -----CCCEEEEEC----SCHHHHHHHHHHHHHTTCEEEEESS
T ss_pred CCCCCCCCeEEEEc----CCHHHHHHHHHHHHHCCeEEEEeCC
Confidence 66677889999985 5566677788888888998875554
No 322
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=30.13 E-value=1.7e+02 Score=28.32 Aligned_cols=146 Identities=11% Similarity=0.020 Sum_probs=76.0
Q ss_pred CCeEEEEEeccccccCHHHHHHHHHHHHhcCCceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccChHHHhhcccccc
Q 011832 288 VRSVLYVSFGSITLLKREQLIEFWHGLVDSKQRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQEEVLAHQAVAG 367 (476)
Q Consensus 288 ~~~~I~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~ 367 (476)
.+.++.|..|... ..-+..|.+.+.++.+.-... ...+..+.+ ..++.+..---+.+.|..+++
T Consensus 12 ~~~vlVvGgG~va-------~~k~~~L~~~ga~V~vi~~~~-----~~~~~~l~~--~~~i~~~~~~~~~~~l~~~~l-- 75 (457)
T 1pjq_A 12 DRDCLIVGGGDVA-------ERKARLLLEAGARLTVNALTF-----IPQFTVWAN--EGMLTLVEGPFDETLLDSCWL-- 75 (457)
T ss_dssp TCEEEEECCSHHH-------HHHHHHHHHTTBEEEEEESSC-----CHHHHHHHT--TTSCEEEESSCCGGGGTTCSE--
T ss_pred CCEEEEECCCHHH-------HHHHHHHHhCcCEEEEEcCCC-----CHHHHHHHh--cCCEEEEECCCCccccCCccE--
Confidence 4568888877554 334456666787776654321 112222221 135554432223344556666
Q ss_pred cccccCchh-----HHHHHhhCCce--eccCCcccchhhHHHHHhh--hcceeecc-cc-cCHHHHHHHHHHHHhHhHHH
Q 011832 368 FLTHSGWNS-----TLESIVAGVPM--ICWPYFADQQINSRFVSEV--WNLGLDMK-DV-CDRNVVEKMVNDLMVERKEE 436 (476)
Q Consensus 368 ~I~HGG~~s-----~~eal~~GvP~--l~iP~~~DQ~~na~~v~~~--~G~G~~~~-~~-~~~~~l~~~i~~~l~~~~~~ 436 (476)
+|..-|.-. ..+|-..|+|+ +--|-..|...-|- + ++ +-+|+.=. +. .-+..|++.|...|.++...
T Consensus 76 Vi~at~~~~~n~~i~~~a~~~~i~vn~~d~~e~~~~~~pa~-~-~~~~l~iaIsT~Gksp~la~~ir~~ie~~l~~~~~~ 153 (457)
T 1pjq_A 76 AIAATDDDTVNQRVSDAAESRRIFCNVVDAPKAASFIMPSI-I-DRSPLMVAVSSGGTSPVLARLLREKLESLLPQHLGQ 153 (457)
T ss_dssp EEECCSCHHHHHHHHHHHHHTTCEEEETTCTTSSSEECCEE-E-EETTEEEEEECTTSCHHHHHHHHHHHHHHSCTTHHH
T ss_pred EEEcCCCHHHHHHHHHHHHHcCCEEEECCCcccCceEeeeE-E-EeCCeEEEEECCCCChHHHHHHHHHHHHhcchhHHH
Confidence 777777653 44556679997 44444444332111 1 11 12444411 22 23577788887777632235
Q ss_pred HHHHHHHHHHHHHHH
Q 011832 437 FMRAADRMATMARTT 451 (476)
Q Consensus 437 y~~~a~~~~~~~~~~ 451 (476)
+.+.+.++++++++.
T Consensus 154 ~~~~~~~~R~~~~~~ 168 (457)
T 1pjq_A 154 VARYAGQLRARVKKQ 168 (457)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhh
Confidence 666666666666653
No 323
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=30.03 E-value=28 Score=32.73 Aligned_cols=39 Identities=10% Similarity=0.043 Sum_probs=28.1
Q ss_pred CCCEEEEEcCCCcc-C---HHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 6 KSPHILIFPLPCQS-H---MNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 6 ~~~~il~~~~~~~g-H---~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
++|||+++..+-.+ | +.....++++|.++||+|..+...
T Consensus 2 ~~~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (364)
T 2i87_A 2 TKENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYIT 44 (364)
T ss_dssp -CEEEEEEEECSSSCHHHHHHHHHHHHHTSCTTTEEEEEEEEC
T ss_pred CCcEEEEEECCCCccchhHHHHHHHHHHHHhhcCCEEEEEEEc
Confidence 47899998854332 2 234578899999999999998753
No 324
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=30.02 E-value=64 Score=26.12 Aligned_cols=29 Identities=14% Similarity=0.045 Sum_probs=18.4
Q ss_pred EEEEeccccccCHHHHHHHHHHHHhcCCceE
Q 011832 292 LYVSFGSITLLKREQLIEFWHGLVDSKQRFL 322 (476)
Q Consensus 292 I~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i 322 (476)
|-|-+||.. +-...++....++.++..+=
T Consensus 2 V~Iimgs~S--D~~v~~~a~~~l~~~gi~~d 30 (157)
T 2ywx_A 2 ICIIMGSES--DLKIAEKAVNILKEFGVEFE 30 (157)
T ss_dssp EEEEESSGG--GHHHHHHHHHHHHHTTCCEE
T ss_pred EEEEEccHH--HHHHHHHHHHHHHHcCCCeE
Confidence 334456554 55666777788888877643
No 325
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=29.89 E-value=3.1e+02 Score=27.16 Aligned_cols=35 Identities=6% Similarity=-0.125 Sum_probs=28.1
Q ss_pred HHHHHHHhcCCCCceEEEECCCcchHHHHHHHcCCCeEEE
Q 011832 99 PLLKQMLIDTSPPVSCIIGDACMEFVVDVATELEIPVIHF 138 (476)
Q Consensus 99 ~~l~~ll~~~~~~~DlvI~D~~~~~~~~vA~~l~iP~i~~ 138 (476)
..+.++++.. +||++|... ....+|+++|||++.+
T Consensus 446 ~el~~~i~~~--~pDl~ig~~---~~~~~a~k~gIP~~~~ 480 (533)
T 1mio_A 446 HDMEVVLEKL--KPDMFFAGI---KEKFVIQKGGVLSKQL 480 (533)
T ss_dssp HHHHHHHHHH--CCSEEEECH---HHHHHHHHTTCEEEET
T ss_pred HHHHHHHHhc--CCCEEEccc---chhHHHHhcCCCEEEe
Confidence 4577788877 899999763 3578999999999975
No 326
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=29.79 E-value=70 Score=26.60 Aligned_cols=37 Identities=19% Similarity=0.235 Sum_probs=26.5
Q ss_pred CCEEEEEcCCCccCHHHH-HHHHHHHHhCCCEEEEEeC
Q 011832 7 SPHILIFPLPCQSHMNSM-LKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~-l~La~~L~~rGH~Vt~~~~ 43 (476)
.|||+++-....|+..-+ -.+++.|.+.|++|.++.-
T Consensus 5 M~kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l 42 (200)
T 2a5l_A 5 SPYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTV 42 (200)
T ss_dssp CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEBC
T ss_pred cceEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEEh
Confidence 358888775557776554 3466777778999988865
No 327
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=29.78 E-value=3.3e+02 Score=25.03 Aligned_cols=108 Identities=14% Similarity=0.123 Sum_probs=57.1
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHHhc-CCceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccChHHHhhccccccc
Q 011832 290 SVLYVSFGSITLLKREQLIEFWHGLVDS-KQRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQEEVLAHQAVAGF 368 (476)
Q Consensus 290 ~~I~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ 368 (476)
++.+|..|.+.. ..+.++... +..++.+.... .+... ... ..++ .-+-...++|..+++.++
T Consensus 7 ~vgiiG~G~~g~-------~~~~~l~~~~~~~l~av~d~~-----~~~~~-~a~--~~g~--~~~~~~~~ll~~~~~D~V 69 (359)
T 3e18_A 7 QLVIVGYGGMGS-------YHVTLASAADNLEVHGVFDIL-----AEKRE-AAA--QKGL--KIYESYEAVLADEKVDAV 69 (359)
T ss_dssp EEEEECCSHHHH-------HHHHHHHTSTTEEEEEEECSS-----HHHHH-HHH--TTTC--CBCSCHHHHHHCTTCCEE
T ss_pred cEEEECcCHHHH-------HHHHHHHhCCCcEEEEEEcCC-----HHHHH-HHH--hcCC--ceeCCHHHHhcCCCCCEE
Confidence 477888887652 244556555 34555555533 11111 111 1222 234456788886555445
Q ss_pred ccccCch----hHHHHHhhCCceec-cCC--cccchhhHHHHHhhhcceeecc
Q 011832 369 LTHSGWN----STLESIVAGVPMIC-WPY--FADQQINSRFVSEVWNLGLDMK 414 (476)
Q Consensus 369 I~HGG~~----s~~eal~~GvP~l~-iP~--~~DQ~~na~~v~~~~G~G~~~~ 414 (476)
+--.... -+.+|+.+|+++++ =|+ ..++-.-...++++.|+-+.+.
T Consensus 70 ~i~tp~~~h~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~ 122 (359)
T 3e18_A 70 LIATPNDSHKELAISALEAGKHVVCEKPVTMTSEDLLAIMDVAKRVNKHFMVH 122 (359)
T ss_dssp EECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEE
T ss_pred EEcCCcHHHHHHHHHHHHCCCCEEeeCCCcCCHHHHHHHHHHHHHhCCeEEEE
Confidence 5433333 46778999999887 344 3344444444446656554443
No 328
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=29.62 E-value=70 Score=27.34 Aligned_cols=32 Identities=9% Similarity=0.169 Sum_probs=23.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 9 HILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 9 ~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|.++++ |+.|-+ -.++++.|+++||+|+++.-
T Consensus 6 k~vlVt-Gasggi--G~~~a~~l~~~G~~V~~~~r 37 (234)
T 2ehd_A 6 GAVLIT-GASRGI--GEATARLLHAKGYRVGLMAR 37 (234)
T ss_dssp CEEEES-STTSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEE-CCCcHH--HHHHHHHHHHCCCEEEEEEC
Confidence 455555 444433 46899999999999998875
No 329
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=29.60 E-value=24 Score=32.09 Aligned_cols=39 Identities=5% Similarity=-0.045 Sum_probs=29.9
Q ss_pred CCCEEEEEcCCCcc----CHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 6 KSPHILIFPLPCQS----HMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 6 ~~~~il~~~~~~~g----H~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
.+|||+++..+-.+ -+.....++++|.++||+|..+...
T Consensus 2 ~~m~v~vl~gg~s~e~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (307)
T 3r5x_A 2 NAMRIGVIMGGVSSEKQVSIMTGNEMIANLDKNKYEIVPITLN 44 (307)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHHHHHHSCTTTEEEEEEECS
T ss_pred CCcEEEEEeCCCCcchHhHHHHHHHHHHHHHHCCCEEEEEccc
Confidence 47899999854221 2455778999999999999999874
No 330
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=29.57 E-value=64 Score=28.79 Aligned_cols=33 Identities=12% Similarity=0.140 Sum_probs=25.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
.|+++++.++.| =-.++|+.|+++|++|.++..
T Consensus 29 ~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~~ 61 (280)
T 4da9_A 29 RPVAIVTGGRRG---IGLGIARALAASGFDIAITGI 61 (280)
T ss_dssp CCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEecCCCH---HHHHHHHHHHHCCCeEEEEeC
Confidence 367777744442 347899999999999999874
No 331
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=29.43 E-value=77 Score=27.88 Aligned_cols=40 Identities=18% Similarity=0.272 Sum_probs=26.6
Q ss_pred CCCCCEEEEEcCCCc--cCHHHHHH-HHHHHHhCCCEEEEEeC
Q 011832 4 KPKSPHILIFPLPCQ--SHMNSMLK-LAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 4 ~~~~~~il~~~~~~~--gH~~p~l~-La~~L~~rGH~Vt~~~~ 43 (476)
.++.|||+++...-+ |.-.-+.. +++.+.+.|++|.++--
T Consensus 31 ~~~~mkIliI~GS~r~~s~t~~La~~~~~~l~~~g~eve~idL 73 (247)
T 2q62_A 31 STHRPRILILYGSLRTVSYSRLLAEEARRLLEFFGAEVKVFDP 73 (247)
T ss_dssp CCSCCEEEEEECCCCSSCHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred cCCCCeEEEEEccCCCCCHHHHHHHHHHHHHhhCCCEEEEEEh
Confidence 345689988874433 55544444 66677778999988764
No 332
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=29.43 E-value=70 Score=28.72 Aligned_cols=38 Identities=11% Similarity=0.012 Sum_probs=28.1
Q ss_pred CCEEEEEcCCCc-cCHH---HHHHHHHHHHhCCCEEEEEeCC
Q 011832 7 SPHILIFPLPCQ-SHMN---SMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 7 ~~~il~~~~~~~-gH~~---p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
+|||+++..+.. -|-. ....++++|.++||+|.++...
T Consensus 2 ~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 2 TDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 478999885432 2322 4568999999999999998874
No 333
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=29.38 E-value=30 Score=34.01 Aligned_cols=33 Identities=15% Similarity=0.137 Sum_probs=26.6
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
++|||+|+..|..| ..+|..|+++||+|+++..
T Consensus 4 ~~~~IgvIG~G~mG-----~~lA~~L~~~G~~V~v~dr 36 (474)
T 2iz1_A 4 AQANFGVVGMAVMG-----KNLALNVESRGYTVAIYNR 36 (474)
T ss_dssp TTBSEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCCcEEEEeeHHHH-----HHHHHHHHhCCCEEEEEcC
Confidence 35889999876665 4678999999999988865
No 334
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=29.37 E-value=81 Score=29.12 Aligned_cols=81 Identities=10% Similarity=-0.040 Sum_probs=45.8
Q ss_pred EEEEEeccccccCHHHHHHHHHHHHhcCCceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccChHHHhhccccccccc
Q 011832 291 VLYVSFGSITLLKREQLIEFWHGLVDSKQRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQEEVLAHQAVAGFLT 370 (476)
Q Consensus 291 ~I~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~ 370 (476)
.|+++..+-.....+....+...|+..+..+........ + ...++. .......+++ +|.
T Consensus 28 ~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t~~~--~---~a~~~~--------------~~~~~~~~d~--vvv 86 (337)
T 2qv7_A 28 RIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEKI--G---DATLEA--------------ERAMHENYDV--LIA 86 (337)
T ss_dssp EEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECCST--T---HHHHHH--------------HHHTTTTCSE--EEE
T ss_pred EEEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEecCc--c---hHHHHH--------------HHHhhcCCCE--EEE
Confidence 455554433222235566678888877766544432220 0 011111 1112223455 999
Q ss_pred ccCchhHHHHHh------hCCceeccCC
Q 011832 371 HSGWNSTLESIV------AGVPMICWPY 392 (476)
Q Consensus 371 HGG~~s~~eal~------~GvP~l~iP~ 392 (476)
-||=||+.|++. .++|+.++|.
T Consensus 87 ~GGDGTv~~v~~~l~~~~~~~pl~iIP~ 114 (337)
T 2qv7_A 87 AGGDGTLNEVVNGIAEKPNRPKLGVIPM 114 (337)
T ss_dssp EECHHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred EcCchHHHHHHHHHHhCCCCCcEEEecC
Confidence 999999999863 4689999997
No 335
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=29.34 E-value=45 Score=30.49 Aligned_cols=34 Identities=18% Similarity=0.123 Sum_probs=24.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
.|+|++. |+.|.+- ..|++.|+++||+|+.+.-.
T Consensus 3 ~~~vlVt--GatG~iG--~~l~~~L~~~G~~V~~~~r~ 36 (345)
T 2z1m_A 3 GKRALIT--GIRGQDG--AYLAKLLLEKGYEVYGADRR 36 (345)
T ss_dssp CCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEE--CCCChHH--HHHHHHHHHCCCEEEEEECC
Confidence 4677665 4555443 57899999999999988753
No 336
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=29.30 E-value=58 Score=28.94 Aligned_cols=33 Identities=12% Similarity=-0.069 Sum_probs=25.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
-|+++++.++.| =-.++|+.|+++|++|.++.-
T Consensus 30 ~k~vlVTGas~G---IG~aia~~l~~~G~~Vi~~~r 62 (281)
T 3ppi_A 30 GASAIVSGGAGG---LGEATVRRLHADGLGVVIADL 62 (281)
T ss_dssp TEEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 467777755543 357899999999999988765
No 337
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=29.28 E-value=24 Score=35.03 Aligned_cols=39 Identities=18% Similarity=0.307 Sum_probs=28.0
Q ss_pred CCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 1 MEEKPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 1 ~~~~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
|.+.++..+|+|+-.|..| +.+|..|+++|++|+++-..
T Consensus 1 M~~~~~~~dVvIVGgG~aG-----l~aA~~La~~G~~V~liE~~ 39 (512)
T 3e1t_A 1 MSTRPEVFDLIVIGGGPGG-----STLASFVAMRGHRVLLLERE 39 (512)
T ss_dssp ----CEEEEEEEECCSHHH-----HHHHHHHHTTTCCEEEECSS
T ss_pred CCCCCccCCEEEECcCHHH-----HHHHHHHHhCCCCEEEEccC
Confidence 5544555789998866544 78888999999999999764
No 338
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=29.26 E-value=21 Score=33.02 Aligned_cols=37 Identities=19% Similarity=0.051 Sum_probs=26.6
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCC----CEEEEEeCC
Q 011832 3 EKPKSPHILIFPLPCQSHMNSMLKLAEIFGLAG----LKVTFLNSK 44 (476)
Q Consensus 3 ~~~~~~~il~~~~~~~gH~~p~l~La~~L~~rG----H~Vt~~~~~ 44 (476)
.+++.|||+|+..|..| ..+|..|.++| |+|+++...
T Consensus 18 ~~~~~mkI~iIG~G~mG-----~ala~~L~~~G~~~~~~V~v~~r~ 58 (322)
T 2izz_A 18 LYFQSMSVGFIGAGQLA-----FALAKGFTAAGVLAAHKIMASSPD 58 (322)
T ss_dssp ----CCCEEEESCSHHH-----HHHHHHHHHTTSSCGGGEEEECSC
T ss_pred hccCCCEEEEECCCHHH-----HHHHHHHHHCCCCCcceEEEECCC
Confidence 35667899999876555 46788899999 999988753
No 339
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=29.13 E-value=81 Score=27.13 Aligned_cols=39 Identities=21% Similarity=0.210 Sum_probs=25.9
Q ss_pred CCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 1 MEEKPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 1 ~~~~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|....+. |.++++ |+.|-+ -.++++.|+++||+|+++.-
T Consensus 1 m~~~~~~-~~vlVt-Gasggi--G~~la~~l~~~G~~V~~~~r 39 (248)
T 2pnf_A 1 MEIKLQG-KVSLVT-GSTRGI--GRAIAEKLASAGSTVIITGT 39 (248)
T ss_dssp CCCCCTT-CEEEET-TCSSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CccccCC-CEEEEE-CCCchH--HHHHHHHHHHCCCEEEEEeC
Confidence 5433333 445555 444433 46789999999999998875
No 340
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=29.11 E-value=38 Score=30.24 Aligned_cols=31 Identities=16% Similarity=-0.010 Sum_probs=24.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|||+|+..|..| ..+|+.|.++||+|+++..
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~~ 31 (279)
T 2f1k_A 1 MKIGVVGLGLIG-----ASLAGDLRRRGHYLIGVSR 31 (279)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEEcCcHHH-----HHHHHHHHHCCCEEEEEEC
Confidence 688888765444 4678899999999988854
No 341
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=29.10 E-value=70 Score=28.51 Aligned_cols=34 Identities=18% Similarity=0.112 Sum_probs=25.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
+.|+++++.++.| =-.++|+.|+++|++|.++.-
T Consensus 26 ~~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r 59 (277)
T 4dqx_A 26 NQRVCIVTGGGSG---IGRATAELFAKNGAYVVVADV 59 (277)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 3467777755443 357899999999999998875
No 342
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=29.08 E-value=16 Score=33.43 Aligned_cols=34 Identities=21% Similarity=-0.016 Sum_probs=27.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKH 45 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~ 45 (476)
..+|+|+-.+..| +..|..|+++|++|+++....
T Consensus 7 ~~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~~~ 40 (332)
T 3lzw_A 7 VYDITIIGGGPVG-----LFTAFYGGMRQASVKIIESLP 40 (332)
T ss_dssp EEEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSSS
T ss_pred cceEEEECCCHHH-----HHHHHHHHHCCCCEEEEEcCC
Confidence 4588888866444 788899999999999998743
No 343
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=29.04 E-value=38 Score=30.76 Aligned_cols=33 Identities=9% Similarity=0.081 Sum_probs=23.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
.|+|++. |+.|.+- ..|++.|.++||+|+++..
T Consensus 3 ~~~ilVt--GatG~iG--~~l~~~L~~~g~~v~~~~r 35 (321)
T 1e6u_A 3 KQRVFIA--GHRGMVG--SAIRRQLEQRGDVELVLRT 35 (321)
T ss_dssp CEEEEEE--TTTSHHH--HHHHHHHTTCTTEEEECCC
T ss_pred CCEEEEE--CCCcHHH--HHHHHHHHhCCCeEEEEec
Confidence 4677766 4556553 5678999999999887653
No 344
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=29.01 E-value=16 Score=19.01 Aligned_cols=18 Identities=22% Similarity=0.512 Sum_probs=14.7
Q ss_pred CchhHHHHHhhCCceecc
Q 011832 373 GWNSTLESIVAGVPMICW 390 (476)
Q Consensus 373 G~~s~~eal~~GvP~l~i 390 (476)
|.|++.-.|..|.|.++-
T Consensus 1 giGa~LKVLa~~LP~liS 18 (26)
T 3qrx_B 1 GIGAVLKVLTTGLPALIS 18 (26)
T ss_pred CchHHHHHHHccchHHHH
Confidence 678888899999987764
No 345
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=28.99 E-value=1.9e+02 Score=26.27 Aligned_cols=110 Identities=12% Similarity=0.062 Sum_probs=57.3
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHHhcC-CceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccChHHHhhccccccc
Q 011832 290 SVLYVSFGSITLLKREQLIEFWHGLVDSK-QRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQEEVLAHQAVAGF 368 (476)
Q Consensus 290 ~~I~vs~Gs~~~~~~~~~~~~~~a~~~~~-~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ 368 (476)
.+.+|..|.+. ..++.++...+ ..++.+.+.+. +....+.++.. + ..-+-...++|..+++.++
T Consensus 7 ~igiiG~G~~g-------~~~~~~l~~~~~~~l~av~d~~~-----~~~~~~~~~~~--~-~~~~~~~~~ll~~~~~D~V 71 (330)
T 3e9m_A 7 RYGIMSTAQIV-------PRFVAGLRESAQAEVRGIASRRL-----ENAQKMAKELA--I-PVAYGSYEELCKDETIDII 71 (330)
T ss_dssp EEEECSCCTTH-------HHHHHHHHHSSSEEEEEEBCSSS-----HHHHHHHHHTT--C-CCCBSSHHHHHHCTTCSEE
T ss_pred EEEEECchHHH-------HHHHHHHHhCCCcEEEEEEeCCH-----HHHHHHHHHcC--C-CceeCCHHHHhcCCCCCEE
Confidence 46777888765 23566666653 45555554331 11233333221 1 0123456778875444445
Q ss_pred ccccCch----hHHHHHhhCCceec-cCCcc--cchhhHHHHHhhhcceeecc
Q 011832 369 LTHSGWN----STLESIVAGVPMIC-WPYFA--DQQINSRFVSEVWNLGLDMK 414 (476)
Q Consensus 369 I~HGG~~----s~~eal~~GvP~l~-iP~~~--DQ~~na~~v~~~~G~G~~~~ 414 (476)
+--.-.. -+.+++.+|+++++ =|+.. ++-.-...++++.|+-+.+.
T Consensus 72 ~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~ 124 (330)
T 3e9m_A 72 YIPTYNQGHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQEQGVFLMEA 124 (330)
T ss_dssp EECCCGGGHHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHHTTCCEEEC
T ss_pred EEcCCCHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 5433333 36778999999876 25433 44444444445656655544
No 346
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=28.95 E-value=52 Score=30.09 Aligned_cols=35 Identities=17% Similarity=0.141 Sum_probs=25.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
.+.|+|+|. |+.|.+ -..|++.|+++||+|+.+.-
T Consensus 18 ~~~~~vlVT--GasG~i--G~~l~~~L~~~g~~V~~~~r 52 (330)
T 2pzm_A 18 GSHMRILIT--GGAGCL--GSNLIEHWLPQGHEILVIDN 52 (330)
T ss_dssp TTCCEEEEE--TTTSHH--HHHHHHHHGGGTCEEEEEEC
T ss_pred CCCCEEEEE--CCCCHH--HHHHHHHHHHCCCEEEEEEC
Confidence 345777766 455544 36789999999999999875
No 347
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=28.86 E-value=48 Score=29.03 Aligned_cols=33 Identities=15% Similarity=-0.076 Sum_probs=23.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
||+++++.++ |-+ -.++|+.|+++|++|.++.-
T Consensus 1 Mk~vlVTGas-~gI--G~~ia~~l~~~G~~V~~~~r 33 (254)
T 1zmt_A 1 MSTAIVTNVK-HFG--GMGSALRLSEAGHTVACHDE 33 (254)
T ss_dssp -CEEEESSTT-STT--HHHHHHHHHHTTCEEEECCG
T ss_pred CeEEEEeCCC-chH--HHHHHHHHHHCCCEEEEEeC
Confidence 5677777444 333 46899999999999888654
No 348
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A*
Probab=28.73 E-value=49 Score=33.42 Aligned_cols=45 Identities=16% Similarity=0.121 Sum_probs=37.2
Q ss_pred CCCCCCCCEEEEEc-CCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 011832 1 MEEKPKSPHILIFP-LPCQSHMNSMLKLAEIFGLAGLKVTFLNSKH 45 (476)
Q Consensus 1 ~~~~~~~~~il~~~-~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~ 45 (476)
|....+.++|+|++ -|+.|-..-..+||..|+++|++|.++..+.
T Consensus 1 ~~~~~~~~~i~~~sgkGGvGKTT~a~~lA~~lA~~G~rVLlvd~D~ 46 (589)
T 1ihu_A 1 MQFLQNIPPYLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVSTDP 46 (589)
T ss_dssp CGGGSSCCSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCCCCCCEEEEEeCCCcCHHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 44555667777776 4567999999999999999999999999875
No 349
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=28.66 E-value=18 Score=31.45 Aligned_cols=35 Identities=20% Similarity=0.221 Sum_probs=23.9
Q ss_pred CCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 3 EKPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 3 ~~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
.+..++||+++.. |. -...+++.|.++|| |+++..
T Consensus 5 ~~~~~~~viI~G~---G~--~G~~la~~L~~~g~-v~vid~ 39 (234)
T 2aef_A 5 DVAKSRHVVICGW---SE--STLECLRELRGSEV-FVLAED 39 (234)
T ss_dssp -----CEEEEESC---CH--HHHHHHHHSTTSEE-EEEESC
T ss_pred CCCCCCEEEEECC---Ch--HHHHHHHHHHhCCe-EEEEEC
Confidence 4456789999875 33 33789999999999 888865
No 350
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=28.63 E-value=1.8e+02 Score=26.78 Aligned_cols=109 Identities=12% Similarity=0.027 Sum_probs=58.9
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHHhc-CCceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccChHHHhhccccccc
Q 011832 290 SVLYVSFGSITLLKREQLIEFWHGLVDS-KQRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQEEVLAHQAVAGF 368 (476)
Q Consensus 290 ~~I~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ 368 (476)
++.+|..|.+. ...+.++... +..++.+.+.+ .+....+.+.. ++. .+-...++|..+++.++
T Consensus 7 ~vgiiG~G~~g-------~~~~~~l~~~~~~~lvav~d~~-----~~~~~~~~~~~--g~~--~~~~~~~~l~~~~~D~V 70 (354)
T 3db2_A 7 GVAAIGLGRWA-------YVMADAYTKSEKLKLVTCYSRT-----EDKREKFGKRY--NCA--GDATMEALLAREDVEMV 70 (354)
T ss_dssp EEEEECCSHHH-------HHHHHHHTTCSSEEEEEEECSS-----HHHHHHHHHHH--TCC--CCSSHHHHHHCSSCCEE
T ss_pred eEEEEccCHHH-------HHHHHHHHhCCCcEEEEEECCC-----HHHHHHHHHHc--CCC--CcCCHHHHhcCCCCCEE
Confidence 47788888764 2356677666 45666666543 11223332222 121 24566788855444334
Q ss_pred ccccC----chhHHHHHhhCCceecc-CCc--ccchhhHHHHHhhhcceeecc
Q 011832 369 LTHSG----WNSTLESIVAGVPMICW-PYF--ADQQINSRFVSEVWNLGLDMK 414 (476)
Q Consensus 369 I~HGG----~~s~~eal~~GvP~l~i-P~~--~DQ~~na~~v~~~~G~G~~~~ 414 (476)
+---. .-.+.+++.+|+++++= |+. .++-.-...++++.|+-+.+.
T Consensus 71 ~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~ 123 (354)
T 3db2_A 71 IITVPNDKHAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKETGVKFLCG 123 (354)
T ss_dssp EECSCTTSHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEE
T ss_pred EEeCChHHHHHHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHHHHcCCeEEEe
Confidence 43222 33467889999998872 543 344444444446666655554
No 351
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=28.61 E-value=93 Score=23.19 Aligned_cols=38 Identities=16% Similarity=0.034 Sum_probs=28.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
.+||+++|..+.|==.-...+-+.+.++|.++.+...+
T Consensus 3 mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~~ 40 (106)
T 1e2b_A 3 KKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAFP 40 (106)
T ss_dssp CEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEEC
T ss_pred CcEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 46899999776644456668888999999988776553
No 352
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=28.53 E-value=2.4e+02 Score=23.57 Aligned_cols=29 Identities=10% Similarity=0.044 Sum_probs=24.6
Q ss_pred CceEEEECCCcchHHHHHHHcCCCeEEEecCc
Q 011832 111 PVSCIIGDACMEFVVDVATELEIPVIHFRAIS 142 (476)
Q Consensus 111 ~~DlvI~D~~~~~~~~vA~~l~iP~i~~~~~~ 142 (476)
++|+||.|. .+..+|+++|+|.+.+.++.
T Consensus 142 G~~vvVG~~---~~~~~A~~~Gl~~vli~sg~ 170 (196)
T 2q5c_A 142 NIKIVVSGK---TVTDEAIKQGLYGETINSGE 170 (196)
T ss_dssp TCCEEEECH---HHHHHHHHTTCEEEECCCCH
T ss_pred CCeEEECCH---HHHHHHHHcCCcEEEEecCH
Confidence 889999984 35789999999999998754
No 353
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=28.52 E-value=59 Score=24.03 Aligned_cols=46 Identities=9% Similarity=-0.013 Sum_probs=33.4
Q ss_pred hCCceeccCCcccchhhHHHHHhhhcceeecccccCHHHHHHHHHHHHh
Q 011832 383 AGVPMICWPYFADQQINSRFVSEVWNLGLDMKDVCDRNVVEKMVNDLMV 431 (476)
Q Consensus 383 ~GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~l~~~i~~~l~ 431 (476)
..+|++++ ..+........ .+.|+--.+.+.++.++|.++|++++.
T Consensus 79 ~~~~ii~~--~~~~~~~~~~~-~~~g~~~~l~kp~~~~~l~~~i~~~~~ 124 (127)
T 2gkg_A 79 KNVPIVII--GNPDGFAQHRK-LKAHADEYVAKPVDADQLVERAGALIG 124 (127)
T ss_dssp TTSCEEEE--ECGGGHHHHHH-STTCCSEEEESSCCHHHHHHHHHHHHC
T ss_pred cCCCEEEE--ecCCchhHHHH-HHhCcchheeCCCCHHHHHHHHHHHHc
Confidence 47899988 33444444555 456776677778999999999998875
No 354
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=28.47 E-value=36 Score=30.03 Aligned_cols=33 Identities=9% Similarity=-0.027 Sum_probs=25.1
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
++|||+|+..|..| ..+++.|.++||+|+++..
T Consensus 2 ~~m~i~iiG~G~mG-----~~~a~~l~~~g~~v~~~~~ 34 (259)
T 2ahr_A 2 NAMKIGIIGVGKMA-----SAIIKGLKQTPHELIISGS 34 (259)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHTTSSCEEEEECS
T ss_pred CccEEEEECCCHHH-----HHHHHHHHhCCCeEEEECC
Confidence 34799999765555 3578899999999987765
No 355
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=28.42 E-value=93 Score=22.47 Aligned_cols=35 Identities=6% Similarity=0.076 Sum_probs=26.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
.+..+|++++..+ ......+..|.+.|++|..+..
T Consensus 54 ~~~~~ivvyC~~g----~rs~~a~~~L~~~G~~v~~l~G 88 (100)
T 3foj_A 54 NDNETYYIICKAG----GRSAQVVQYLEQNGVNAVNVEG 88 (100)
T ss_dssp CTTSEEEEECSSS----HHHHHHHHHHHTTTCEEEEETT
T ss_pred CCCCcEEEEcCCC----chHHHHHHHHHHCCCCEEEecc
Confidence 4456899998443 3466788999999998887765
No 356
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=28.41 E-value=63 Score=29.84 Aligned_cols=34 Identities=9% Similarity=-0.012 Sum_probs=25.6
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
+.|+|+|. |+.|.+- ..|++.|+++||+|+.+.-
T Consensus 8 ~~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r 41 (357)
T 1rkx_A 8 QGKRVFVT--GHTGFKG--GWLSLWLQTMGATVKGYSL 41 (357)
T ss_dssp TTCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEE--CCCchHH--HHHHHHHHhCCCeEEEEeC
Confidence 45777765 4556553 5688999999999999875
No 357
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=28.35 E-value=32 Score=32.27 Aligned_cols=38 Identities=8% Similarity=0.002 Sum_probs=26.7
Q ss_pred CCCEEEEEcCCCc-cC---HHHHHHHHHHHHhCCCEEEEEeC
Q 011832 6 KSPHILIFPLPCQ-SH---MNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 6 ~~~~il~~~~~~~-gH---~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
+++||+++..|.. =| +....++++.|.+.||+|+.+..
T Consensus 2 ~kkkv~vl~GG~S~E~evSl~Sa~~v~~aL~~~gy~v~~i~i 43 (357)
T 4fu0_A 2 QNKKIAVIFGGNSTEYEVSLQSASAVFENINTNKFDIIPIGI 43 (357)
T ss_dssp CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEE
T ss_pred CCCEEEEEECCCccchHHHHHHHHHHHHHHhHhCCEEEEEEE
Confidence 4569988854322 24 34456789999999999998753
No 358
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=28.24 E-value=94 Score=26.29 Aligned_cols=36 Identities=17% Similarity=0.137 Sum_probs=28.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
+||+|+-.++.. ..-+....+.|...|++|++++..
T Consensus 10 ~~v~ill~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~ 45 (208)
T 3ot1_A 10 KRILVPVAHGSE-EMETVIIVDTLVRAGFQVTMAAVG 45 (208)
T ss_dssp CEEEEEECTTCC-HHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CeEEEEECCCCc-HHHHHHHHHHHHHCCCEEEEEEcC
Confidence 389888877654 455666778888999999999984
No 359
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=28.20 E-value=53 Score=24.75 Aligned_cols=39 Identities=13% Similarity=0.076 Sum_probs=26.6
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEe
Q 011832 4 KPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLN 42 (476)
Q Consensus 4 ~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~ 42 (476)
..++|||+++|..+.|=-.-...+=+...++|.+|.+..
T Consensus 3 ~~~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i~a 41 (108)
T 3nbm_A 3 ASKELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANS 41 (108)
T ss_dssp --CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred cccCceEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEE
Confidence 356899999998776544444555555566798888865
No 360
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=28.20 E-value=55 Score=29.30 Aligned_cols=34 Identities=21% Similarity=0.117 Sum_probs=24.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
+.|+++++.++.| =-.++|+.|+++|++|.++.-
T Consensus 7 ~gk~vlVTGas~G---IG~aia~~la~~G~~V~~~~r 40 (280)
T 3tox_A 7 EGKIAIVTGASSG---IGRAAALLFAREGAKVVVTAR 40 (280)
T ss_dssp TTCEEEESSTTSH---HHHHHHHHHHHTTCEEEECCS
T ss_pred CCCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEEC
Confidence 3467777755442 346899999999999887654
No 361
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=28.20 E-value=95 Score=25.63 Aligned_cols=40 Identities=20% Similarity=0.159 Sum_probs=25.0
Q ss_pred CCCCCEEEEEc-CCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 4 KPKSPHILIFP-LPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 4 ~~~~~~il~~~-~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
|.+..|++++- ..++=. .=+..-.+.|.++|++|+++++.
T Consensus 4 m~~t~~~v~il~~~gFe~-~E~~~p~~~l~~ag~~V~~~s~~ 44 (177)
T 4hcj_A 4 MGKTNNILYVMSGQNFQD-EEYFESKKIFESAGYKTKVSSTF 44 (177)
T ss_dssp -CCCCEEEEECCSEEECH-HHHHHHHHHHHHTTCEEEEEESS
T ss_pred cccCCCEEEEECCCCccH-HHHHHHHHHHHHCCCEEEEEECC
Confidence 33344555444 333323 33566678888999999999974
No 362
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=28.08 E-value=1.1e+02 Score=26.61 Aligned_cols=39 Identities=13% Similarity=0.128 Sum_probs=25.5
Q ss_pred CCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 1 MEEKPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 1 ~~~~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|....+.+ .++++ |+.|-+ -.++++.|+++|++|+++.-
T Consensus 1 m~~~~~~k-~vlIT-Gasggi--G~~la~~l~~~G~~V~~~~r 39 (264)
T 2pd6_A 1 MQNRLRSA-LALVT-GAGSGI--GRAVSVRLAGEGATVAACDL 39 (264)
T ss_dssp CCCCCTTC-EEEEE-TTTSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CccccCCC-EEEEE-CCCChH--HHHHHHHHHHCCCEEEEEeC
Confidence 44444344 44555 333433 46899999999999998875
No 363
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=28.05 E-value=1.1e+02 Score=26.72 Aligned_cols=39 Identities=18% Similarity=0.260 Sum_probs=25.6
Q ss_pred CCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 1 MEEKPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 1 ~~~~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|....+. |.++++.+ .|-+ -.++++.|+++|++|+++.-
T Consensus 1 m~~~l~~-k~vlVTGa-s~gI--G~~ia~~l~~~G~~V~~~~r 39 (263)
T 3ai3_A 1 MDMGISG-KVAVITGS-SSGI--GLAIAEGFAKEGAHIVLVAR 39 (263)
T ss_dssp CCCCCTT-CEEEEESC-SSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCCC-CEEEEECC-CchH--HHHHHHHHHHCCCEEEEEcC
Confidence 4433333 44555533 3433 46899999999999998875
No 364
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=28.04 E-value=1.2e+02 Score=22.57 Aligned_cols=39 Identities=18% Similarity=0.135 Sum_probs=0.0
Q ss_pred CCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 1 MEEKPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 1 ~~~~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|+...+++||+++- .|-.-...+.+.|.+.|++|+.+..
T Consensus 1 M~~~~~~~~ilivd----d~~~~~~~l~~~L~~~g~~v~~~~~ 39 (130)
T 3eod_A 1 MTQPLVGKQILIVE----DEQVFRSLLDSWFSSLGATTVLAAD 39 (130)
T ss_dssp --CTTTTCEEEEEC----SCHHHHHHHHHHHHHTTCEEEEESC
T ss_pred CCCCCCCCeEEEEe----CCHHHHHHHHHHHHhCCceEEEeCC
No 365
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=28.01 E-value=68 Score=27.69 Aligned_cols=33 Identities=18% Similarity=0.204 Sum_probs=22.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
||.++++ |+.|-+ -.++++.|+++||+|+++.-
T Consensus 1 Mk~vlVt-Gasg~i--G~~l~~~L~~~g~~V~~~~r 33 (255)
T 2dkn_A 1 MSVIAIT-GSASGI--GAALKELLARAGHTVIGIDR 33 (255)
T ss_dssp -CEEEEE-TTTSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CcEEEEe-CCCcHH--HHHHHHHHHhCCCEEEEEeC
Confidence 4445555 444543 46789999999999998875
No 366
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=27.99 E-value=23 Score=31.45 Aligned_cols=33 Identities=15% Similarity=0.212 Sum_probs=24.1
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCE-EEEEeC
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFGLAGLK-VTFLNS 43 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~-Vt~~~~ 43 (476)
+.|||+|+..|..| ..+++.|.++||+ |+++..
T Consensus 9 ~~m~i~iiG~G~mG-----~~~a~~l~~~g~~~v~~~~~ 42 (266)
T 3d1l_A 9 EDTPIVLIGAGNLA-----TNLAKALYRKGFRIVQVYSR 42 (266)
T ss_dssp GGCCEEEECCSHHH-----HHHHHHHHHHTCCEEEEECS
T ss_pred CCCeEEEEcCCHHH-----HHHHHHHHHCCCeEEEEEeC
Confidence 35899999765444 3568889899999 666654
No 367
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=27.97 E-value=79 Score=26.58 Aligned_cols=37 Identities=3% Similarity=0.049 Sum_probs=26.2
Q ss_pred CCCEEEEEcCCCccC----HHHHHHHHHHHHhCCCEEEEEeC
Q 011832 6 KSPHILIFPLPCQSH----MNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 6 ~~~~il~~~~~~~gH----~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
..|+|.+++... +. ..-..+|++.|+++||.|..=..
T Consensus 12 ~~~~I~Vfg~s~-~~~~~~~~~A~~lg~~la~~g~~lv~GGG 52 (189)
T 3sbx_A 12 GRWTVAVYCAAA-PTHPELLELAGAVGAAIAARGWTLVWGGG 52 (189)
T ss_dssp -CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECCB
T ss_pred CCeEEEEEEeCC-CCChHHHHHHHHHHHHHHHCCCEEEECCC
Confidence 358999998654 33 34467888999999998765543
No 368
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=27.96 E-value=20 Score=32.02 Aligned_cols=53 Identities=17% Similarity=0.253 Sum_probs=38.7
Q ss_pred cccccccccccCchhHHHHHhh---CCceeccCCcccchhhHHHHHhhhcceeecccccCHHHHHHHHHHHHhH
Q 011832 362 HQAVAGFLTHSGWNSTLESIVA---GVPMICWPYFADQQINSRFVSEVWNLGLDMKDVCDRNVVEKMVNDLMVE 432 (476)
Q Consensus 362 ~~~~~~~I~HGG~~s~~eal~~---GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~l~~~i~~~l~~ 432 (476)
.+++ +|+=||=||+.+++.. ++|+++++.. . +|... .+.++++.+++.++++.
T Consensus 41 ~~D~--vv~~GGDGTll~~a~~~~~~~PilGIn~G------------~--~Gfl~--~~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 41 TADL--IVVVGGDGTVLKAAKKAADGTPMVGFKAG------------R--LGFLT--SYTLDEIDRFLEDLRNW 96 (258)
T ss_dssp CCSE--EEEEECHHHHHHHHTTBCTTCEEEEEESS------------S--CCSSC--CBCGGGHHHHHHHHHTT
T ss_pred CCCE--EEEEeCcHHHHHHHHHhCCCCCEEEEECC------------C--CCccC--cCCHHHHHHHHHHHHcC
Confidence 4566 9999999999999877 8898888531 0 12221 35678888888888774
No 369
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=27.95 E-value=45 Score=31.57 Aligned_cols=34 Identities=15% Similarity=0.207 Sum_probs=27.5
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
++++|+|+..|-. -+.+|..|+++|++|+++-..
T Consensus 25 ~~~dV~IVGaG~a-----Gl~~A~~L~~~G~~v~v~E~~ 58 (398)
T 2xdo_A 25 SDKNVAIIGGGPV-----GLTMAKLLQQNGIDVSVYERD 58 (398)
T ss_dssp TTCEEEEECCSHH-----HHHHHHHHHTTTCEEEEEECS
T ss_pred CCCCEEEECCCHH-----HHHHHHHHHHCCCCEEEEeCC
Confidence 4578999886643 478899999999999999864
No 370
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=27.89 E-value=74 Score=26.46 Aligned_cols=31 Identities=16% Similarity=0.170 Sum_probs=23.5
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCE
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFGLAGLK 37 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~ 37 (476)
+..+|+++. ++.|++--+...++.|..-|..
T Consensus 20 ~~~~V~Iim-GS~SD~~v~~~a~~~L~~~Gi~ 50 (182)
T 1u11_A 20 SAPVVGIIM-GSQSDWETMRHADALLTELEIP 50 (182)
T ss_dssp CCCSEEEEE-SSGGGHHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEEE-CcHHHHHHHHHHHHHHHHcCCC
Confidence 345677776 8888888888888888887743
No 371
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=27.87 E-value=30 Score=33.96 Aligned_cols=39 Identities=18% Similarity=0.095 Sum_probs=26.7
Q ss_pred CCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 1 MEEKPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 1 ~~~~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
|..+++.++|+|+-.+.. -+..|..|+++|++|+++-..
T Consensus 5 m~~~~~~~dVvVIGgG~a-----Gl~aA~~l~~~g~~V~liE~~ 43 (479)
T 2hqm_A 5 MSTNTKHYDYLVIGGGSG-----GVASARRAASYGAKTLLVEAK 43 (479)
T ss_dssp -----CEEEEEEECCSHH-----HHHHHHHHHHTSCCEEEEESS
T ss_pred ccCccccCCEEEEcCCHH-----HHHHHHHHHHCCCcEEEEeCC
Confidence 444455688999885533 366788888899999999875
No 372
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=27.86 E-value=1.3e+02 Score=28.05 Aligned_cols=35 Identities=11% Similarity=0.150 Sum_probs=22.7
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHHhcCCceEEEEC
Q 011832 290 SVLYVSFGSITLLKREQLIEFWHGLVDSKQRFLWVIR 326 (476)
Q Consensus 290 ~~I~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~ 326 (476)
.+++++.|+... -..+..+.++|...|++|.+...
T Consensus 6 ~il~~~~~~~Gh--v~~~~~La~~L~~~GheV~v~~~ 40 (402)
T 3ia7_A 6 HILFANVQGHGH--VYPSLGLVSELARRGHRITYVTT 40 (402)
T ss_dssp EEEEECCSSHHH--HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEEeCCCCcc--cccHHHHHHHHHhCCCEEEEEcC
Confidence 477777765431 22344577888888888877764
No 373
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=27.83 E-value=61 Score=29.62 Aligned_cols=31 Identities=13% Similarity=0.096 Sum_probs=23.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEe
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLN 42 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~ 42 (476)
|+|++. |+.|.+- ..|++.|+++||+|+.+.
T Consensus 1 m~vlVT--GatG~iG--~~l~~~L~~~G~~V~~~~ 31 (338)
T 1udb_A 1 MRVLVT--GGSGYIG--SHTCVQLLQNGHDVIILD 31 (338)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEE
T ss_pred CEEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEe
Confidence 566554 5556553 578999999999999875
No 374
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=27.82 E-value=37 Score=30.57 Aligned_cols=31 Identities=23% Similarity=0.121 Sum_probs=25.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|||.|+-.|..| ..+|+.|+++||+|+++..
T Consensus 2 ~~I~iiG~G~mG-----~~~a~~l~~~G~~V~~~dr 32 (287)
T 3pdu_A 2 TTYGFLGLGIMG-----GPMAANLVRAGFDVTVWNR 32 (287)
T ss_dssp CCEEEECCSTTH-----HHHHHHHHHHTCCEEEECS
T ss_pred CeEEEEccCHHH-----HHHHHHHHHCCCeEEEEcC
Confidence 579999877766 4578999999999998865
No 375
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=27.77 E-value=1.3e+02 Score=27.60 Aligned_cols=82 Identities=13% Similarity=-0.114 Sum_probs=0.0
Q ss_pred CCeEEEEEeccccccCHHHHHHHHHHHHhcCCceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccChHHHhhcccccc
Q 011832 288 VRSVLYVSFGSITLLKREQLIEFWHGLVDSKQRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQEEVLAHQAVAG 367 (476)
Q Consensus 288 ~~~~I~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~ 367 (476)
++-.|+++..+-.. +....+...++..+..+.+..... ++-...+ -...+-..+++
T Consensus 30 ~~~~vi~Np~sg~~---~~~~~i~~~l~~~g~~~~~~~t~~---------~~~~~~~----------~~~~~~~~~d~-- 85 (332)
T 2bon_A 30 PASLLILNGKSTDN---LPLREAIMLLREEGMTIHVRVTWE---------KGDAARY----------VEEARKFGVAT-- 85 (332)
T ss_dssp CCEEEEECSSSTTC---HHHHHHHHHHHTTTCCEEEEECCS---------TTHHHHH----------HHHHHHHTCSE--
T ss_pred ceEEEEECCCCCCC---chHHHHHHHHHHcCCcEEEEEecC---------cchHHHH----------HHHHHhcCCCE--
Q ss_pred cccccCchhHHHHH--------hhCCceeccCCc
Q 011832 368 FLTHSGWNSTLESI--------VAGVPMICWPYF 393 (476)
Q Consensus 368 ~I~HGG~~s~~eal--------~~GvP~l~iP~~ 393 (476)
+|.-||=||+.|++ ..++|+.++|..
T Consensus 86 vvv~GGDGTl~~v~~~l~~~~~~~~~plgiiP~G 119 (332)
T 2bon_A 86 VIAGGGDGTINEVSTALIQCEGDDIPALGILPLG 119 (332)
T ss_dssp EEEEESHHHHHHHHHHHHHCCSSCCCEEEEEECS
T ss_pred EEEEccchHHHHHHHHHhhcccCCCCeEEEecCc
No 376
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=27.71 E-value=70 Score=24.72 Aligned_cols=41 Identities=20% Similarity=0.246 Sum_probs=0.0
Q ss_pred HHHHHHHhcCCCCceEEEECCCcc--hHHHHHHHcC---------CCeEEEecC
Q 011832 99 PLLKQMLIDTSPPVSCIIGDACME--FVVDVATELE---------IPVIHFRAI 141 (476)
Q Consensus 99 ~~l~~ll~~~~~~~DlvI~D~~~~--~~~~vA~~l~---------iP~i~~~~~ 141 (476)
....+.+... +||+||.|.... -+..+.+.+. +|.+.++..
T Consensus 48 ~~al~~~~~~--~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~ 99 (143)
T 3m6m_D 48 EQVLDAMAEE--DYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSAD 99 (143)
T ss_dssp HHHHHHHHHS--CCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESC
T ss_pred HHHHHHHhcC--CCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCC
No 377
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=27.65 E-value=65 Score=31.71 Aligned_cols=34 Identities=18% Similarity=0.232 Sum_probs=27.7
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
+.+||.|+..++.| |..+|+.|.++|++|+..-.
T Consensus 21 ~~~~v~viGiG~sG----~s~~A~~l~~~G~~V~~~D~ 54 (494)
T 4hv4_A 21 RVRHIHFVGIGGAG----MGGIAEVLANEGYQISGSDL 54 (494)
T ss_dssp -CCEEEEETTTSTT----HHHHHHHHHHTTCEEEEECS
T ss_pred cCCEEEEEEEcHhh----HHHHHHHHHhCCCeEEEEEC
Confidence 44789999998876 44589999999999998754
No 378
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=27.59 E-value=54 Score=32.44 Aligned_cols=34 Identities=18% Similarity=0.131 Sum_probs=25.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
+|||+|.. +.|-+- ..|++.|.++||+|+.++-.
T Consensus 147 ~m~VLVTG--atG~IG--~~l~~~L~~~G~~V~~l~R~ 180 (516)
T 3oh8_A 147 PLTVAITG--SRGLVG--RALTAQLQTGGHEVIQLVRK 180 (516)
T ss_dssp CCEEEEES--TTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEC--CCCHHH--HHHHHHHHHCCCEEEEEECC
Confidence 67887764 445443 57899999999999998864
No 379
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=27.44 E-value=2e+02 Score=21.76 Aligned_cols=37 Identities=14% Similarity=0.080 Sum_probs=23.9
Q ss_pred CCeEEEEEeccccccCHHHHHHHHHHHHhcCCceEEE
Q 011832 288 VRSVLYVSFGSITLLKREQLIEFWHGLVDSKQRFLWV 324 (476)
Q Consensus 288 ~~~~I~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~ 324 (476)
++.+|+++.||-.......+..+.+.++.....+.+.
T Consensus 5 ~~alllv~HGS~~~~~~~~~~~l~~~l~~~~~~V~~a 41 (126)
T 3lyh_A 5 PHQIILLAHGSSDARWCETFEKLAEPTVESIENAAIA 41 (126)
T ss_dssp CEEEEEEECCCSCHHHHHHHHHHHHHHHHHSTTCEEE
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHHHHHhhcCCEEEE
Confidence 4569999999975333455666777776544445444
No 380
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=27.38 E-value=55 Score=29.93 Aligned_cols=31 Identities=10% Similarity=-0.053 Sum_probs=21.9
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 10 ILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 10 il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
.++++ |+.|-+- ..|++.|+++||+|+.+.-
T Consensus 7 ~vlVT-GatGfIG--~~l~~~L~~~G~~V~~~~r 37 (337)
T 2c29_D 7 TVCVT-GASGFIG--SWLVMRLLERGYTVRATVR 37 (337)
T ss_dssp EEEET-TTTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred EEEEE-CCchHHH--HHHHHHHHHCCCEEEEEEC
Confidence 34444 5556554 5689999999999987664
No 381
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=27.38 E-value=61 Score=29.84 Aligned_cols=36 Identities=14% Similarity=-0.040 Sum_probs=25.6
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKH 45 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~ 45 (476)
++|+|+|+ |+.|.+- ..|++.|.++||+|+.++-..
T Consensus 9 ~~~~IlVt--GatG~iG--~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 9 PKGRVLIA--GATGFIG--QFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp --CCEEEE--CTTSHHH--HHHHHHHHHTTCCEEEEECSS
T ss_pred CCCeEEEE--CCCcHHH--HHHHHHHHHCCCCEEEEECCC
Confidence 34677766 4555443 578899999999999998744
No 382
>1ny5_A Transcriptional regulator (NTRC family); AAA+ ATPase, sigma54 activator, bacterial transcription, DIM transcription; HET: ADP; 2.40A {Aquifex aeolicus} SCOP: c.23.1.1 c.37.1.20 PDB: 1ny6_A* 3m0e_A* 1zy2_A*
Probab=27.27 E-value=3.9e+02 Score=24.97 Aligned_cols=49 Identities=8% Similarity=-0.064 Sum_probs=35.0
Q ss_pred hhCCceeccCCcccchhhHHHHHhhhcceeecccccCHHHHHHHHHHHHhH
Q 011832 382 VAGVPMICWPYFADQQINSRFVSEVWNLGLDMKDVCDRNVVEKMVNDLMVE 432 (476)
Q Consensus 382 ~~GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~l~~~i~~~l~~ 432 (476)
...+|+|++.-..|. ..+... -+.|+--.+.+.++.++|..+|++++..
T Consensus 70 ~~~~pvIvlT~~~~~-~~~~~a-~~~Ga~dyl~KP~~~~~L~~~i~~~l~~ 118 (387)
T 1ny5_A 70 SPETEVIVITGHGTI-KTAVEA-MKMGAYDFLTKPCMLEEIELTINKAIEH 118 (387)
T ss_dssp CTTSEEEEEEETTCH-HHHHHH-HTTTCCEEEEESCCHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEeCCCCH-HHHHHH-HhcCceEEecCCCCHHHHHHHHHHHHHH
Confidence 346888888655443 344444 3457777777789999999999999874
No 383
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=27.19 E-value=86 Score=30.77 Aligned_cols=36 Identities=17% Similarity=0.198 Sum_probs=29.0
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 4 KPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 4 ~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
+.+.+||.|+..+..| |..+|+.|.++|++|+..-.
T Consensus 16 ~~~~~~v~viGiG~sG----~s~~A~~l~~~G~~V~~~D~ 51 (491)
T 2f00_A 16 MRRVRHIHFVGIGGAG----MGGIAEVLANEGYQISGSDL 51 (491)
T ss_dssp CTTCCEEEEETTTSTT----HHHHHHHHHHTTCEEEEECS
T ss_pred cccCCEEEEEEcCHHH----HHHHHHHHHhCCCeEEEECC
Confidence 3456789999998776 45689999999999998654
No 384
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=27.13 E-value=31 Score=28.47 Aligned_cols=34 Identities=9% Similarity=-0.015 Sum_probs=25.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhC-CCEEEEEeCC
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFGLA-GLKVTFLNSK 44 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~~r-GH~Vt~~~~~ 44 (476)
..+||+|+..|.. -..+|+.|.++ ||+|+++...
T Consensus 38 ~~~~v~IiG~G~~-----G~~~a~~L~~~~g~~V~vid~~ 72 (183)
T 3c85_A 38 GHAQVLILGMGRI-----GTGAYDELRARYGKISLGIEIR 72 (183)
T ss_dssp TTCSEEEECCSHH-----HHHHHHHHHHHHCSCEEEEESC
T ss_pred CCCcEEEECCCHH-----HHHHHHHHHhccCCeEEEEECC
Confidence 3578999854433 35678999999 9999999863
No 385
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=27.12 E-value=34 Score=31.27 Aligned_cols=36 Identities=19% Similarity=0.264 Sum_probs=27.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKH 45 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~ 45 (476)
+++++|+++-.+..| +..|..|+++|++|+++-...
T Consensus 3 ~~~~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~~~ 38 (335)
T 2zbw_A 3 ADHTDVLIVGAGPTG-----LFAGFYVGMRGLSFRFVDPLP 38 (335)
T ss_dssp CCEEEEEEECCSHHH-----HHHHHHHHHTTCCEEEEESSS
T ss_pred CCcCcEEEECCCHHH-----HHHHHHHHhCCCCEEEEeCCC
Confidence 446789988755333 678888999999999998743
No 386
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=27.09 E-value=38 Score=32.30 Aligned_cols=32 Identities=16% Similarity=0.100 Sum_probs=25.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
|+|+|+-.|..| +..|..|+++|++|+++-..
T Consensus 1 ~dVvVIGaGiaG-----LsaA~~La~~G~~V~vlE~~ 32 (425)
T 3ka7_A 1 MKTVVIGAGLGG-----LLSAARLSKAGHEVEVFERL 32 (425)
T ss_dssp CEEEEECCBHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CcEEEECCCHHH-----HHHHHHHHhCCCceEEEeCC
Confidence 578888766544 88899999999999999753
No 387
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=26.98 E-value=35 Score=28.52 Aligned_cols=39 Identities=8% Similarity=-0.067 Sum_probs=21.0
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHh---CCCEEEEEeC
Q 011832 4 KPKSPHILIFPLPCQSHMNSMLKLAEIFGL---AGLKVTFLNS 43 (476)
Q Consensus 4 ~~~~~~il~~~~~~~gH~~p~l~La~~L~~---rGH~Vt~~~~ 43 (476)
|.++|||+++....+.+ .-...+++.+++ .|++|.++.-
T Consensus 3 m~~~Mkilii~gS~r~~-g~t~~la~~i~~~l~~g~~v~~~dl 44 (193)
T 1rtt_A 3 LSDDIKVLGISGSLRSG-SYNSAALQEAIGLVPPGMSIELADI 44 (193)
T ss_dssp ----CEEEEEESCCSTT-CHHHHHHHHHHTTCCTTCEEEECCC
T ss_pred CCCCceEEEEECCCCCC-ChHHHHHHHHHHhccCCCeEEEEeH
Confidence 34568998887544311 234555555544 4788877653
No 388
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=26.94 E-value=1.2e+02 Score=26.47 Aligned_cols=32 Identities=9% Similarity=0.133 Sum_probs=23.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 9 HILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 9 ~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|+++++.++ |-+ -.++++.|+++|++|+++.-
T Consensus 8 k~vlVTGas-~gI--G~~ia~~l~~~G~~V~~~~r 39 (260)
T 2z1n_A 8 KLAVVTAGS-SGL--GFASALELARNGARLLLFSR 39 (260)
T ss_dssp CEEEEETTT-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-chH--HHHHHHHHHHCCCEEEEEeC
Confidence 455555333 333 47899999999999998875
No 389
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=26.87 E-value=72 Score=25.05 Aligned_cols=37 Identities=30% Similarity=0.389 Sum_probs=26.4
Q ss_pred CEEEEEcCCCccCHHH-HHHHHHHHHhCCCEEEEEeCC
Q 011832 8 PHILIFPLPCQSHMNS-MLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p-~l~La~~L~~rGH~Vt~~~~~ 44 (476)
|||+++-...+|+..- ...|++.|.++|++|.++...
T Consensus 2 ~ki~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~ 39 (148)
T 3f6r_A 2 SKVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAA 39 (148)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETT
T ss_pred CeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEehh
Confidence 4676665556787754 445778888899999988763
No 390
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=26.83 E-value=1.9e+02 Score=21.33 Aligned_cols=46 Identities=11% Similarity=0.047 Sum_probs=32.1
Q ss_pred CCceeccCCcccchhhHHHHHhhhcceeecccccCHHHHHHHHHHHHhH
Q 011832 384 GVPMICWPYFADQQINSRFVSEVWNLGLDMKDVCDRNVVEKMVNDLMVE 432 (476)
Q Consensus 384 GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~l~~~i~~~l~~ 432 (476)
.+|++++--..+... ... .+.|+--.+.+.++.++|.++|++++..
T Consensus 77 ~~pii~~s~~~~~~~--~~~-~~~g~~~~l~KP~~~~~l~~~i~~~l~~ 122 (133)
T 3nhm_A 77 HIPVIFVSGYAPRTE--GPA-DQPVPDAYLVKPVKPPVLIAQLHALLAR 122 (133)
T ss_dssp TCCEEEEESCCC-------T-TSCCCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHhH--HHH-hhcCCceEEeccCCHHHHHHHHHHHHhh
Confidence 788888876655544 333 3457666676789999999999999984
No 391
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=26.81 E-value=69 Score=24.28 Aligned_cols=64 Identities=8% Similarity=0.037 Sum_probs=43.4
Q ss_pred hcccccccccccCchh---------HHHHHhhCCceeccCCcccchhhHHHHHhhhcceeecccccCHHHHHHHHHHHHh
Q 011832 361 AHQAVAGFLTHSGWNS---------TLESIVAGVPMICWPYFADQQINSRFVSEVWNLGLDMKDVCDRNVVEKMVNDLMV 431 (476)
Q Consensus 361 ~~~~~~~~I~HGG~~s---------~~eal~~GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~l~~~i~~~l~ 431 (476)
..+++ +|--.|..| +-.|...|+|++++=-.+.+. .-..+ ++.+.-+. ..+.+.|.++|+..++
T Consensus 37 ~~~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l-~~~a~~iV---~Wn~~~I~~aI~~~~~ 109 (111)
T 1eiw_A 37 EDADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPEL-EAVSSEVV---GWNPHCIRDALEDALD 109 (111)
T ss_dssp SSCSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTH-HHHCSEEE---CSCHHHHHHHHHHHHC
T ss_pred ccCCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHH-HhhCceec---cCCHHHHHHHHHhccC
Confidence 34666 888888887 667888999999998777652 11224 32222222 3688999999988764
No 392
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=26.77 E-value=55 Score=32.58 Aligned_cols=35 Identities=26% Similarity=0.146 Sum_probs=29.7
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
+.+||.|+..++.| |..+|+.|.++|++|+..=..
T Consensus 18 ~~~~i~~iGiGg~G----ms~lA~~l~~~G~~V~~sD~~ 52 (524)
T 3hn7_A 18 QGMHIHILGICGTF----MGSLALLARALGHTVTGSDAN 52 (524)
T ss_dssp -CCEEEEETTTSHH----HHHHHHHHHHTTCEEEEEESC
T ss_pred cCCEEEEEEecHhh----HHHHHHHHHhCCCEEEEECCC
Confidence 46799999999877 778999999999999997653
No 393
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=26.72 E-value=2.1e+02 Score=21.63 Aligned_cols=47 Identities=2% Similarity=-0.045 Sum_probs=34.0
Q ss_pred hCCceeccCCcccchhhHHHHHhhhcceeeccccc-CHHHHHHHHHHHHh
Q 011832 383 AGVPMICWPYFADQQINSRFVSEVWNLGLDMKDVC-DRNVVEKMVNDLMV 431 (476)
Q Consensus 383 ~GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~~~~~-~~~~l~~~i~~~l~ 431 (476)
.++|++++--..|... ..+. -+.|+--.+.+.+ +.++|.++|++++.
T Consensus 80 ~~~pii~~s~~~~~~~-~~~~-~~~ga~~~l~Kp~~~~~~l~~~i~~~l~ 127 (144)
T 3kht_A 80 QHTPIVILTDNVSDDR-AKQC-MAAGASSVVDKSSNNVTDFYGRIYAIFS 127 (144)
T ss_dssp TTCCEEEEETTCCHHH-HHHH-HHTTCSEEEECCTTSHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHH-HHHH-HHcCCCEEEECCCCcHHHHHHHHHHHHH
Confidence 4688888765555443 3333 3458777777778 99999999999987
No 394
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=26.64 E-value=1e+02 Score=28.40 Aligned_cols=35 Identities=26% Similarity=0.163 Sum_probs=25.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHh--CCCEEEEEeC
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGL--AGLKVTFLNS 43 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~--rGH~Vt~~~~ 43 (476)
.+.|+|+|. |+.|-+ -..|++.|++ +||+|+.+.-
T Consensus 8 ~~~~~vlVT--GatG~I--G~~l~~~L~~~~~g~~V~~~~r 44 (362)
T 3sxp_A 8 LENQTILIT--GGAGFV--GSNLAFHFQENHPKAKVVVLDK 44 (362)
T ss_dssp CTTCEEEEE--TTTSHH--HHHHHHHHHHHCTTSEEEEEEC
T ss_pred cCCCEEEEE--CCCCHH--HHHHHHHHHhhCCCCeEEEEEC
Confidence 445677666 344443 3578999999 9999999875
No 395
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=26.62 E-value=1.1e+02 Score=31.22 Aligned_cols=39 Identities=3% Similarity=-0.053 Sum_probs=27.5
Q ss_pred HHHHHhcCCCCceEEEECCCcc-hHHHHHHHcCCCeEEEecC
Q 011832 101 LKQMLIDTSPPVSCIIGDACME-FVVDVATELEIPVIHFRAI 141 (476)
Q Consensus 101 l~~ll~~~~~~~DlvI~D~~~~-~~~~vA~~l~iP~i~~~~~ 141 (476)
+.+.+++. +||+||+=.+.. ....+-......++-++++
T Consensus 67 ~~~~l~~~--~~d~iv~~~~~~il~~~~l~~~~~~~iNiH~s 106 (660)
T 1z7e_A 67 WVERIAQL--SPDVIFSFYYRHLIYDEILQLAPAGAFNLHGS 106 (660)
T ss_dssp HHHHHHHH--CCSEEEEESCCSCCCHHHHTTCTTCEEEEESS
T ss_pred HHHHHHhc--CCCEEEEcCcccccCHHHHhcCCCCeEEecCC
Confidence 45556666 789999876644 4456666677778888887
No 396
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=26.58 E-value=45 Score=26.37 Aligned_cols=37 Identities=19% Similarity=0.085 Sum_probs=29.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHN 46 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~ 46 (476)
..+++++..|. =+-|++++++.|.++|.+|+++ ....
T Consensus 18 ~~~~llIaGG~--GiaPl~sm~~~l~~~~~~v~l~-g~R~ 54 (142)
T 3lyu_A 18 FGKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL-HVTF 54 (142)
T ss_dssp CSEEEEEEETT--HHHHHHHHHHHHHHTTCEEEEE-EEEE
T ss_pred CCeEEEEECcC--cHHHHHHHHHHHHhcCCcEEEE-EeCC
Confidence 45777776443 4899999999999999999999 6444
No 397
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=26.54 E-value=60 Score=30.65 Aligned_cols=73 Identities=14% Similarity=0.182 Sum_probs=49.5
Q ss_pred cCHHHHHHHHHHHHhcCCceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccChHHHhhcccccccccccCchhHHHHH
Q 011832 302 LKREQLIEFWHGLVDSKQRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQEEVLAHQAVAGFLTHSGWNSTLESI 381 (476)
Q Consensus 302 ~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HGG~~s~~eal 381 (476)
.+.+..+.+.+++..-..+.||...++. +-.++.++++...|-.+|+. ||=..-...++-|+
T Consensus 93 td~~Ra~dL~~af~Dp~i~aI~~~rGGy----------------ga~rlLp~LD~~~i~~~PK~--fiGySDiTaL~~ai 154 (371)
T 3tla_A 93 TIKERAQEFNELVYNPDITCIMSTIGGD----------------NSNSLLPFLDYDAIIANPKI--IIGYSDTTALLAGI 154 (371)
T ss_dssp CHHHHHHHHHHHHTCTTEEEEEESCCCS----------------CGGGGGGGSCHHHHHHSCCE--EEECGGGHHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEccccc----------------cHHHHHhhcChhhHHhCCcE--EEEechHHHHHHHH
Confidence 4456677788888877778899988762 22334455555555567776 77777777777776
Q ss_pred h--hCCceeccCC
Q 011832 382 V--AGVPMICWPY 392 (476)
Q Consensus 382 ~--~GvP~l~iP~ 392 (476)
+ .|++.+--|.
T Consensus 155 ~~k~Gl~T~hGP~ 167 (371)
T 3tla_A 155 YAKTGLITFYGPA 167 (371)
T ss_dssp HHHHCBCEEECCC
T ss_pred HHHcCCEEEECcc
Confidence 5 4777766665
No 398
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=26.46 E-value=68 Score=29.01 Aligned_cols=39 Identities=10% Similarity=0.205 Sum_probs=31.5
Q ss_pred CCEE-EEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 011832 7 SPHI-LIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKH 45 (476)
Q Consensus 7 ~~~i-l~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~ 45 (476)
+||+ +|..-|+.|--.-...||..|+++|++|.++-.+.
T Consensus 40 ~~~vI~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 79 (307)
T 3end_A 40 GAKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCDP 79 (307)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred CceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 4454 55556677888999999999999999999997754
No 399
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=26.45 E-value=70 Score=28.65 Aligned_cols=38 Identities=11% Similarity=0.158 Sum_probs=30.9
Q ss_pred CEEEEEc--CCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 011832 8 PHILIFP--LPCQSHMNSMLKLAEIFGLAGLKVTFLNSKH 45 (476)
Q Consensus 8 ~~il~~~--~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~ 45 (476)
+|++.+. -|+.|--.-...||..|+++|++|.++-.+.
T Consensus 4 ~kvI~v~s~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 43 (286)
T 2xj4_A 4 TRVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLDL 43 (286)
T ss_dssp CEEEEECCSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 4555554 4577999999999999999999999988765
No 400
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=26.44 E-value=37 Score=31.09 Aligned_cols=35 Identities=14% Similarity=0.185 Sum_probs=25.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCC--EEEEEeCC
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGLAGL--KVTFLNSK 44 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH--~Vt~~~~~ 44 (476)
.++|||+|+.. |.+--. +|..|+.+|| +|+++...
T Consensus 5 ~~~mkI~IiGa---G~vG~~--~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 5 VKPTKLAVIGA---GAVGST--LAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp --CCEEEEECC---SHHHHH--HHHHHHHTTCCSEEEEECSS
T ss_pred CCCCEEEEECC---CHHHHH--HHHHHHhCCCCCEEEEEeCC
Confidence 34589999875 444333 7778999999 99998764
No 401
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=26.43 E-value=1.3e+02 Score=25.84 Aligned_cols=39 Identities=10% Similarity=0.079 Sum_probs=25.3
Q ss_pred CCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 1 MEEKPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 1 ~~~~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|.+..+.+++ +++ |+.|-+ -.++++.|+++|++|.++.-
T Consensus 1 M~~~l~~k~v-lIT-Gasggi--G~~~a~~l~~~G~~V~~~~r 39 (244)
T 3d3w_A 1 MELFLAGRRV-LVT-GAGKGI--GRGTVQALHATGARVVAVSR 39 (244)
T ss_dssp CCCCCTTCEE-EEE-STTSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CccccCCcEE-EEE-CCCcHH--HHHHHHHHHHCCCEEEEEeC
Confidence 4443444444 444 333433 56889999999999988775
No 402
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=26.42 E-value=86 Score=26.97 Aligned_cols=39 Identities=8% Similarity=0.087 Sum_probs=26.8
Q ss_pred CCCC-EEEEEcCCCcc----CHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 5 PKSP-HILIFPLPCQS----HMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 5 ~~~~-~il~~~~~~~g----H~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
+++| +|.+++....+ +..-...|++.|+++|+.|..-..
T Consensus 6 ~~~m~~V~V~ggsr~~~~~~~~~~A~~lg~~LA~~g~~lV~GGg 49 (216)
T 1ydh_A 6 RSRFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGG 49 (216)
T ss_dssp CCSCSEEEEECCSCCCSSHHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CCCCCeEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEECCC
Confidence 3445 59999754443 334678899999999998755444
No 403
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=26.40 E-value=91 Score=29.44 Aligned_cols=36 Identities=25% Similarity=0.253 Sum_probs=28.8
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 4 KPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 4 ~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
+.++++|+|+..| ..-+..|..|.++||+|+++-..
T Consensus 41 ~~~~~~V~IIGAG-----iaGL~aA~~L~~~G~~V~VlE~~ 76 (376)
T 2e1m_A 41 PGPPKRILIVGAG-----IAGLVAGDLLTRAGHDVTILEAN 76 (376)
T ss_dssp CCSCCEEEEECCB-----HHHHHHHHHHHHTSCEEEEECSC
T ss_pred CCCCceEEEECCC-----HHHHHHHHHHHHCCCcEEEEecc
Confidence 4557899998755 34688999999999999999763
No 404
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=26.36 E-value=45 Score=31.29 Aligned_cols=34 Identities=15% Similarity=0.051 Sum_probs=26.7
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
++++|+|+..|-.| +.+|..|+++|++|+++-..
T Consensus 10 ~~~dVvIVGaG~aG-----l~~A~~L~~~G~~v~viE~~ 43 (379)
T 3alj_A 10 KTRRAEVAGGGFAG-----LTAAIALKQNGWDVRLHEKS 43 (379)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCCeEEEECCCHHH-----HHHHHHHHHCCCCEEEEecC
Confidence 45789998865444 78899999999999999753
No 405
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=26.28 E-value=1e+02 Score=23.38 Aligned_cols=32 Identities=13% Similarity=0.216 Sum_probs=22.5
Q ss_pred CceEEEECCCcc--hHHHHHHHc-------CCCeEEEecCc
Q 011832 111 PVSCIIGDACME--FVVDVATEL-------EIPVIHFRAIS 142 (476)
Q Consensus 111 ~~DlvI~D~~~~--~~~~vA~~l-------~iP~i~~~~~~ 142 (476)
+||+||.|.... .+..+.+.+ ++|++.++...
T Consensus 48 ~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~ 88 (136)
T 3t6k_A 48 LPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQG 88 (136)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTT
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCC
Confidence 789999998766 445554433 58888887654
No 406
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=26.26 E-value=2.1e+02 Score=21.63 Aligned_cols=47 Identities=9% Similarity=-0.007 Sum_probs=34.1
Q ss_pred hCCceeccCCcccchhhHHHHHhhhcceeecccccCHHHHHHHHHHHHh
Q 011832 383 AGVPMICWPYFADQQINSRFVSEVWNLGLDMKDVCDRNVVEKMVNDLMV 431 (476)
Q Consensus 383 ~GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~l~~~i~~~l~ 431 (476)
..+|+|++--..+. ...... -+.|+--.+.+.++.++|.++|+.++.
T Consensus 81 ~~~pii~ls~~~~~-~~~~~~-~~~g~~~~l~kp~~~~~L~~~i~~~~~ 127 (147)
T 2zay_A 81 ASIPVIALSGRATA-KEEAQL-LDMGFIDFIAKPVNAIRLSARIKRVLK 127 (147)
T ss_dssp TTSCEEEEESSCCH-HHHHHH-HHHTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCH-HHHHHH-HhCCCCEEEeCCCCHHHHHHHHHHHHH
Confidence 46888887655543 334444 345887777778999999999999987
No 407
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=26.15 E-value=65 Score=28.97 Aligned_cols=31 Identities=10% Similarity=0.074 Sum_probs=25.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|||+|+..|..|. .++..|.++||+|+++..
T Consensus 6 m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 36 (299)
T 1vpd_A 6 MKVGFIGLGIMGK-----PMSKNLLKAGYSLVVSDR 36 (299)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred ceEEEECchHHHH-----HHHHHHHhCCCEEEEEeC
Confidence 7999998776664 468889999999987764
No 408
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=26.09 E-value=56 Score=27.93 Aligned_cols=31 Identities=23% Similarity=0.362 Sum_probs=24.1
Q ss_pred CceEEE-ECCCcc-hHHHHHHHcCCCeEEEecC
Q 011832 111 PVSCII-GDACME-FVVDVATELEIPVIHFRAI 141 (476)
Q Consensus 111 ~~DlvI-~D~~~~-~~~~vA~~l~iP~i~~~~~ 141 (476)
.||+|| +|+... -++.=|.++|||+|.+.-+
T Consensus 115 ~PdlliV~Dp~~e~~ai~EA~~l~IPvIalvDT 147 (208)
T 1vi6_A 115 EPEVVFVNDPAIDKQAVSEATAVGIPVVALCDS 147 (208)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHTTCCEEEEECT
T ss_pred CCCEEEEECCCcchhHHHHHHHhCCCEEEEeCC
Confidence 678876 676555 6677799999999999653
No 409
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=26.02 E-value=1.5e+02 Score=24.42 Aligned_cols=39 Identities=10% Similarity=0.035 Sum_probs=30.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
++.+||+|+.+++.. ..-+....+.|...|++|+++++.
T Consensus 7 ~~~~~v~il~~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~ 45 (190)
T 2vrn_A 7 LTGKKIAILAADGVE-EIELTSPRAAIEAAGGTTELISLE 45 (190)
T ss_dssp CTTCEEEEECCTTCB-HHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEEEeCCCCC-HHHHHHHHHHHHHCCCEEEEEecC
Confidence 456899999876554 445666778888999999999974
No 410
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=26.02 E-value=45 Score=31.60 Aligned_cols=36 Identities=8% Similarity=0.028 Sum_probs=27.2
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 4 KPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 4 ~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
.+++++|+|+..|-. -+.+|..|+++|++|+++-..
T Consensus 20 ~~~~~dV~IVGaG~a-----Gl~~A~~La~~G~~V~v~E~~ 55 (407)
T 3rp8_A 20 FQGHMKAIVIGAGIG-----GLSAAVALKQSGIDCDVYEAV 55 (407)
T ss_dssp ---CCEEEEECCSHH-----HHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCEEEEECCCHH-----HHHHHHHHHhCCCCEEEEeCC
Confidence 355689999875533 488999999999999999764
No 411
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=25.97 E-value=89 Score=27.82 Aligned_cols=33 Identities=15% Similarity=0.085 Sum_probs=24.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
-|+++++.++ |-+ -.++|+.|+++|++|.++.-
T Consensus 29 gk~vlVTGas-~gI--G~aia~~la~~G~~V~~~~r 61 (277)
T 3gvc_A 29 GKVAIVTGAG-AGI--GLAVARRLADEGCHVLCADI 61 (277)
T ss_dssp TCEEEETTTT-STH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCC-cHH--HHHHHHHHHHCCCEEEEEeC
Confidence 3677777444 433 36899999999999988875
No 412
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=25.83 E-value=1e+02 Score=27.29 Aligned_cols=35 Identities=9% Similarity=0.133 Sum_probs=25.0
Q ss_pred EEEEEcCCCc-cCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 011832 9 HILIFPLPCQ-SHMNSMLKLAEIFGLAGLKVTFLNSKH 45 (476)
Q Consensus 9 ~il~~~~~~~-gH~~p~l~La~~L~~rGH~Vt~~~~~~ 45 (476)
|+++++.++. +-+ -.++|+.|+++|++|.++.-..
T Consensus 27 k~vlVTGasg~~GI--G~~ia~~l~~~G~~V~~~~r~~ 62 (280)
T 3nrc_A 27 KKILITGLLSNKSI--AYGIAKAMHREGAELAFTYVGQ 62 (280)
T ss_dssp CEEEECCCCSTTCH--HHHHHHHHHHTTCEEEEEECTT
T ss_pred CEEEEECCCCCCCH--HHHHHHHHHHcCCEEEEeeCch
Confidence 5677774331 223 4789999999999999987644
No 413
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=25.82 E-value=69 Score=28.71 Aligned_cols=34 Identities=6% Similarity=0.056 Sum_probs=25.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
+.|+++++.++.| =-.++|+.|+++|++|.++.-
T Consensus 11 ~~k~vlITGas~G---IG~~~a~~L~~~G~~V~~~~r 44 (311)
T 3o26_A 11 KRRCAVVTGGNKG---IGFEICKQLSSNGIMVVLTCR 44 (311)
T ss_dssp -CCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCcEEEEecCCch---HHHHHHHHHHHCCCEEEEEeC
Confidence 3467777755543 346899999999999988875
No 414
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=25.80 E-value=3.7e+02 Score=24.29 Aligned_cols=105 Identities=9% Similarity=0.159 Sum_probs=0.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeC-CcchhhhhhcccccccccCCCCeeEEecCCCCCCCCCCC
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFGLA--GLKVTFLNS-KHNHERLIRYTDIHDRFLQYSEFQFKTISDGLPADHPRA 82 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~~r--GH~Vt~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~ 82 (476)
.++||+++..+. || -+.+|.+...+. +.+|..+.+ .+....+.+..+ +.+..++.....
T Consensus 104 ~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~I~~Visn~~~~~~~A~~~g----------Ip~~~~~~~~~~----- 165 (302)
T 3o1l_A 104 QKKRVVLMASRE-SH--CLADLLHRWHSDELDCDIACVISNHQDLRSMVEWHD----------IPYYHVPVDPKD----- 165 (302)
T ss_dssp SCCEEEEEECSC-CH--HHHHHHHHHHTTCSCSEEEEEEESSSTTHHHHHTTT----------CCEEECCCCSSC-----
T ss_pred CCcEEEEEEeCC-ch--hHHHHHHHHHCCCCCcEEEEEEECcHHHHHHHHHcC----------CCEEEcCCCcCC-----
Q ss_pred CCcHHHHHHHHHhhchHHHHHHHhcCCCCceEEEECCCcc-hHHHHHHHcCCCeEEEecC
Q 011832 83 GDQLMEMFDSLSLNTRPLLKQMLIDTSPPVSCIIGDACME-FVVDVATELEIPVIHFRAI 141 (476)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~DlvI~D~~~~-~~~~vA~~l~iP~i~~~~~ 141 (476)
.....+.+.+.+++. ++|+||.=.+.- -...+-+.+.-.++-+.++
T Consensus 166 -----------r~~~~~~~~~~l~~~--~~DliVlagym~IL~~~~l~~~~~~~INiHpS 212 (302)
T 3o1l_A 166 -----------KEPAFAEVSRLVGHH--QADVVVLARYMQILPPQLCREYAHQVINIHHS 212 (302)
T ss_dssp -----------CHHHHHHHHHHHHHT--TCSEEEESSCCSCCCTTHHHHTTTCEEEEESS
T ss_pred -----------HHHHHHHHHHHHHHh--CCCEEEHhHhhhhcCHHHHhhhhCCeEEeCcc
No 415
>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}
Probab=25.77 E-value=1.1e+02 Score=27.82 Aligned_cols=33 Identities=9% Similarity=0.040 Sum_probs=23.9
Q ss_pred CEEEEEcCCC-ccCHHHHHHHHHHHHhCCCEEEEEe
Q 011832 8 PHILIFPLPC-QSHMNSMLKLAEIFGLAGLKVTFLN 42 (476)
Q Consensus 8 ~~il~~~~~~-~gH~~p~l~La~~L~~rGH~Vt~~~ 42 (476)
-|+++++.++ .|-+ -.++|+.|+++|++|.++.
T Consensus 9 ~k~~lVTGa~~s~GI--G~aia~~la~~G~~Vv~~~ 42 (319)
T 2ptg_A 9 GKTAFVAGVADSNGY--GWAICKLLRAAGARVLVGT 42 (319)
T ss_dssp TCEEEEECCCCTTSH--HHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEeCCCCCCcH--HHHHHHHHHHCCCEEEEEe
Confidence 3566777551 3333 4689999999999999875
No 416
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=25.75 E-value=81 Score=28.41 Aligned_cols=34 Identities=12% Similarity=0.189 Sum_probs=26.2
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEe
Q 011832 4 KPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLN 42 (476)
Q Consensus 4 ~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~ 42 (476)
|+++|||+++... .....+.+.|.+.||+|.+..
T Consensus 2 ~~~~m~i~v~~~~-----~~~~~~~~~L~~~g~~v~~~~ 35 (293)
T 3d4o_A 2 MLTGKHVVIIGGD-----ARQLEIIRKLSTFDAKISLVG 35 (293)
T ss_dssp CCTTCEEEEECBC-----HHHHHHHHHHHHTTCEEEEES
T ss_pred CccCcEEEEECCC-----HHHHHHHHHHHhCCCEEEEec
Confidence 4678999888532 356677899999999998764
No 417
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=25.74 E-value=56 Score=31.89 Aligned_cols=36 Identities=25% Similarity=0.130 Sum_probs=29.1
Q ss_pred CCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 4 KPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 4 ~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
++++++|+|+..|.. -+..|..|+++|++|+++-..
T Consensus 8 ~~~~~~v~IIGaG~a-----Gl~aA~~L~~~g~~v~v~E~~ 43 (489)
T 2jae_A 8 VKGSHSVVVLGGGPA-----GLCSAFELQKAGYKVTVLEAR 43 (489)
T ss_dssp CCSCCEEEEECCSHH-----HHHHHHHHHHTTCEEEEECSS
T ss_pred ccCCCCEEEECCCHH-----HHHHHHHHHHCCCCEEEEecc
Confidence 456789999986643 478899999999999998653
No 418
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=25.71 E-value=37 Score=33.44 Aligned_cols=33 Identities=18% Similarity=0.167 Sum_probs=27.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
++|+|+|+..|..| ..+|..|+++||+|+++..
T Consensus 3 ~~~kIgiIGlG~MG-----~~lA~~L~~~G~~V~v~dr 35 (484)
T 4gwg_A 3 AQADIALIGLAVMG-----QNLILNMNDHGFVVCAFNR 35 (484)
T ss_dssp CCBSEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCCEEEEEChhHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 46789999876555 5689999999999998865
No 419
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=25.63 E-value=54 Score=30.96 Aligned_cols=35 Identities=20% Similarity=0.218 Sum_probs=27.8
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
+++++|+|+..|-. -+.+|..|+++|++|+++-..
T Consensus 3 ~~~~~V~IVGaG~a-----Gl~~A~~L~~~G~~v~v~E~~ 37 (397)
T 2vou_A 3 PTTDRIAVVGGSIS-----GLTAALMLRDAGVDVDVYERS 37 (397)
T ss_dssp CCCSEEEEECCSHH-----HHHHHHHHHHTTCEEEEECSS
T ss_pred CCCCcEEEECCCHH-----HHHHHHHHHhCCCCEEEEecC
Confidence 34678999986533 478899999999999999753
No 420
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=25.57 E-value=89 Score=28.61 Aligned_cols=47 Identities=11% Similarity=0.072 Sum_probs=27.5
Q ss_pred hhhhhhhcCCCCCeEEEEEecccc---ccCHHHHHHHHHHHHhcCCceEEEEC
Q 011832 277 RSCIEWLGKQPVRSVLYVSFGSIT---LLKREQLIEFWHGLVDSKQRFLWVIR 326 (476)
Q Consensus 277 ~~~~~~l~~~~~~~~I~vs~Gs~~---~~~~~~~~~~~~a~~~~~~~~i~~~~ 326 (476)
+++...++..+-+++ -+|+.. ......+..+++.+++.+..+++=.+
T Consensus 127 ~el~~~~~~~g~~Gv---~l~~~~~~~~l~d~~~~~~~~~~~e~~lpv~iH~~ 176 (336)
T 2wm1_A 127 KEMERCVKELGFPGV---QIGTHVNEWDLNAQELFPVYAAAERLKCSLFVHPW 176 (336)
T ss_dssp HHHHHHHHTSCCSEE---EEESEETTEETTCGGGHHHHHHHHHHTCEEEEECC
T ss_pred HHHHHHHHccCCeEE---EECCcCCCCCCCCccHHHHHHHHHHcCCEEEECCC
Confidence 456666654333443 234332 33445678888999888877655443
No 421
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=25.55 E-value=54 Score=31.97 Aligned_cols=33 Identities=18% Similarity=0.355 Sum_probs=26.9
Q ss_pred HHHHHhcCCCCceEEEECCCcchHHHHHHHcCCCeEEE
Q 011832 101 LKQMLIDTSPPVSCIIGDACMEFVVDVATELEIPVIHF 138 (476)
Q Consensus 101 l~~ll~~~~~~~DlvI~D~~~~~~~~vA~~l~iP~i~~ 138 (476)
+++++++. +||++|.... ...+|+++|||++.+
T Consensus 367 le~~i~~~--~pDllig~~~---~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 367 LEHAARAG--QAQLVIGNSH---ALASARRLGVPLLRA 399 (458)
T ss_dssp HHHHHHHH--TCSEEEECTT---HHHHHHHTTCCEEEC
T ss_pred HHHHHHhc--CCCEEEEChh---HHHHHHHcCCCEEEe
Confidence 56677776 8899998744 578999999999986
No 422
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=25.48 E-value=76 Score=29.21 Aligned_cols=33 Identities=21% Similarity=0.054 Sum_probs=24.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
.|+|+|. |+.|-+ -..|++.|+++||+|+.+.-
T Consensus 27 ~~~vlVt--GatG~i--G~~l~~~L~~~g~~V~~~~r 59 (352)
T 1sb8_A 27 PKVWLIT--GVAGFI--GSNLLETLLKLDQKVVGLDN 59 (352)
T ss_dssp CCEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEEC
T ss_pred CCeEEEE--CCCcHH--HHHHHHHHHHCCCEEEEEeC
Confidence 4666665 455544 36789999999999999875
No 423
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=25.48 E-value=1.2e+02 Score=26.29 Aligned_cols=33 Identities=12% Similarity=0.196 Sum_probs=23.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 9 HILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 9 ~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
|+++++. +.|-+ -.++++.|+++|++|.++.-.
T Consensus 8 k~vlVTG-as~gI--G~~ia~~l~~~G~~V~~~~r~ 40 (249)
T 2ew8_A 8 KLAVITG-GANGI--GRAIAERFAVEGADIAIADLV 40 (249)
T ss_dssp CEEEEET-TTSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeC-CCcHH--HHHHHHHHHHCCCEEEEEcCC
Confidence 4455553 33433 468999999999999988753
No 424
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=25.45 E-value=1.8e+02 Score=26.75 Aligned_cols=110 Identities=14% Similarity=-0.008 Sum_probs=57.3
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHHhc-CCceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccChHHHhhccccccc
Q 011832 290 SVLYVSFGSITLLKREQLIEFWHGLVDS-KQRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQEEVLAHQAVAGF 368 (476)
Q Consensus 290 ~~I~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ 368 (476)
.+.+|..|.+.. ..++.++... +..++.+.+.+ .+....+.++. ++. .+-...++|..+++.++
T Consensus 29 rigiIG~G~~g~------~~~~~~l~~~~~~~l~av~d~~-----~~~~~~~a~~~--g~~--~~~~~~~ll~~~~~D~V 93 (350)
T 3rc1_A 29 RVGVIGCADIAW------RRALPALEAEPLTEVTAIASRR-----WDRAKRFTERF--GGE--PVEGYPALLERDDVDAV 93 (350)
T ss_dssp EEEEESCCHHHH------HTHHHHHHHCTTEEEEEEEESS-----HHHHHHHHHHH--CSE--EEESHHHHHTCTTCSEE
T ss_pred EEEEEcCcHHHH------HHHHHHHHhCCCeEEEEEEcCC-----HHHHHHHHHHc--CCC--CcCCHHHHhcCCCCCEE
Confidence 477888886652 1255666666 34555555433 11123333222 222 23456788876544334
Q ss_pred ccccC----chhHHHHHhhCCceec-cCCcc--cchhhHHHHHhhhcceeecc
Q 011832 369 LTHSG----WNSTLESIVAGVPMIC-WPYFA--DQQINSRFVSEVWNLGLDMK 414 (476)
Q Consensus 369 I~HGG----~~s~~eal~~GvP~l~-iP~~~--DQ~~na~~v~~~~G~G~~~~ 414 (476)
+---- .--+.+|+.+|+++++ =|+.. ++-.-...++++.|+-+.+.
T Consensus 94 ~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~ 146 (350)
T 3rc1_A 94 YVPLPAVLHAEWIDRALRAGKHVLAEKPLTTDRPQAERLFAVARERGLLLMEN 146 (350)
T ss_dssp EECCCGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred EECCCcHHHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEE
Confidence 43222 2356778999999776 25533 44444444446656555444
No 425
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=25.42 E-value=2.2e+02 Score=21.52 Aligned_cols=107 Identities=8% Similarity=0.017 Sum_probs=59.9
Q ss_pred cCHHHHHHHHHHHHhcC-CceEEEECCCCCCCchhhHHHHHHh-hcCCceEeec-cChHHHhhcccccccccccCchhHH
Q 011832 302 LKREQLIEFWHGLVDSK-QRFLWVIRPDSVIGEGDALAELVEG-TKERGLLVSW-VPQEEVLAHQAVAGFLTHSGWNSTL 378 (476)
Q Consensus 302 ~~~~~~~~~~~a~~~~~-~~~i~~~~~~~~~~~~~~l~~~~~~-~~~nv~~~~~-~pq~~lL~~~~~~~~I~HGG~~s~~ 378 (476)
.++.....+...++..+ +.+++..... +.+..+.+. .+-.+.+.++ +|... |. .+.
T Consensus 28 d~~~~~~~l~~~L~~~g~~~v~~~~~~~------~~~~~~~~~~~~~dlvi~D~~l~~~~--------------g~-~~~ 86 (146)
T 4dad_A 28 EDASRLAHLARLVGDAGRYRVTRTVGRA------AQIVQRTDGLDAFDILMIDGAALDTA--------------EL-AAI 86 (146)
T ss_dssp SCHHHHHHHHHHHHHHCSCEEEEECCCH------HHHTTCHHHHTTCSEEEEECTTCCHH--------------HH-HHH
T ss_pred CCHHHHHHHHHHHhhCCCeEEEEeCCHH------HHHHHHHhcCCCCCEEEEeCCCCCcc--------------HH-HHH
Confidence 45666666778888887 7776654322 111112121 2233444443 22221 11 122
Q ss_pred HH---HhhCCceeccCCcccchhhHHHHHhhhcceeecccccCHHHHHHHHHHHHh
Q 011832 379 ES---IVAGVPMICWPYFADQQINSRFVSEVWNLGLDMKDVCDRNVVEKMVNDLMV 431 (476)
Q Consensus 379 ea---l~~GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~l~~~i~~~l~ 431 (476)
+. ....+|+|++--..|.. ..... -+.|+--.+.+.++.++|.++|++++.
T Consensus 87 ~~l~~~~~~~~ii~lt~~~~~~-~~~~~-~~~ga~~~l~Kp~~~~~L~~~i~~~~~ 140 (146)
T 4dad_A 87 EKLSRLHPGLTCLLVTTDASSQ-TLLDA-MRAGVRDVLRWPLEPRALDDALKRAAA 140 (146)
T ss_dssp HHHHHHCTTCEEEEEESCCCHH-HHHHH-HTTTEEEEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCcEEEEeCCCCHH-HHHHH-HHhCCceeEcCCCCHHHHHHHHHHHHh
Confidence 22 23467888775555443 34444 345877777778999999999999886
No 426
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=25.41 E-value=59 Score=30.38 Aligned_cols=32 Identities=22% Similarity=0.027 Sum_probs=23.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 9 HILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 9 ~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
+|+|. |+.|-+ -..|++.|+++||+|+.+.-.
T Consensus 30 ~vlVt--GatG~I--G~~l~~~L~~~g~~V~~~~r~ 61 (381)
T 1n7h_A 30 IALIT--GITGQD--GSYLTEFLLGKGYEVHGLIRR 61 (381)
T ss_dssp EEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEECC
T ss_pred eEEEE--cCCchH--HHHHHHHHHHCCCEEEEEecC
Confidence 55544 455544 367899999999999998753
No 427
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=25.34 E-value=1.2e+02 Score=26.57 Aligned_cols=32 Identities=13% Similarity=0.106 Sum_probs=22.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 9 HILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 9 ~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|+++++.++ |- =-.++++.|+++|++|+++.-
T Consensus 8 k~vlVTGas-~g--IG~~ia~~l~~~G~~V~~~~r 39 (262)
T 1zem_A 8 KVCLVTGAG-GN--IGLATALRLAEEGTAIALLDM 39 (262)
T ss_dssp CEEEEETTT-SH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-cH--HHHHHHHHHHHCCCEEEEEeC
Confidence 455555333 32 346899999999999998875
No 428
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=25.33 E-value=90 Score=27.35 Aligned_cols=32 Identities=13% Similarity=0.170 Sum_probs=24.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 9 HILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 9 ~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|+++++.++. - --.++|+.|+++|++|.++.-
T Consensus 30 k~vlITGas~-g--IG~~la~~l~~~G~~V~~~~r 61 (262)
T 3rkr_A 30 QVAVVTGASR-G--IGAAIARKLGSLGARVVLTAR 61 (262)
T ss_dssp CEEEESSTTS-H--HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCC-h--HHHHHHHHHHHCCCEEEEEEC
Confidence 5677774443 2 457889999999999988765
No 429
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=25.26 E-value=81 Score=26.16 Aligned_cols=52 Identities=8% Similarity=0.156 Sum_probs=0.0
Q ss_pred CCCCCCCCE--EEEEcCCCccCHHHHHHHHHHHHhCC--CEEEEEeCCcchhhhhhc
Q 011832 1 MEEKPKSPH--ILIFPLPCQSHMNSMLKLAEIFGLAG--LKVTFLNSKHNHERLIRY 53 (476)
Q Consensus 1 ~~~~~~~~~--il~~~~~~~gH~~p~l~La~~L~~rG--H~Vt~~~~~~~~~~~~~~ 53 (476)
|-...++|| |.++. ++.|++.-+...++.|.+-| |+|.+++....-+++.++
T Consensus 14 ~~p~~~~mkp~V~Iim-GS~SD~~v~~~a~~~L~~~gI~~e~~V~SAHRtp~~l~~~ 69 (181)
T 4b4k_A 14 LVPRGSHMKSLVGVIM-GSTSDWETMKYACDILDELNIPYEKKVVSAHRTPDYMFEY 69 (181)
T ss_dssp --------CCSEEEEE-SSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHH
T ss_pred cccCCCCCCccEEEEE-CCHhHHHHHHHHHHHHHHcCCCeeEEEEccccChHHHHHH
No 430
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=25.22 E-value=90 Score=25.12 Aligned_cols=37 Identities=14% Similarity=0.116 Sum_probs=27.4
Q ss_pred CEEEEEcCCCccCHHHHH-HHHHHHHhCCCEEEEEeCC
Q 011832 8 PHILIFPLPCQSHMNSML-KLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l-~La~~L~~rGH~Vt~~~~~ 44 (476)
|||+++=...+|+..-+. .+++.|.+.|++|.++.-.
T Consensus 1 Mkv~IvY~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~ 38 (161)
T 3hly_A 1 MSVLIGYLSDYGYSDRLSQAIGRGLVKTGVAVEMVDLR 38 (161)
T ss_dssp -CEEEEECTTSTTHHHHHHHHHHHHHHTTCCEEEEETT
T ss_pred CEEEEEEECCChHHHHHHHHHHHHHHhCCCeEEEEECC
Confidence 677777666678887654 5788888899999887653
No 431
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=25.16 E-value=46 Score=31.73 Aligned_cols=31 Identities=10% Similarity=0.127 Sum_probs=25.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|+|+|+-.|..| +..|..|+++|++|+++-.
T Consensus 1 ~dVvVIGaGiaG-----LsaA~~La~~G~~V~vlE~ 31 (421)
T 3nrn_A 1 MRAVVVGAGLGG-----LLAGAFLARNGHEIIVLEK 31 (421)
T ss_dssp CEEEEESCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CcEEEECCCHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 578888766544 8899999999999999875
No 432
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=25.15 E-value=31 Score=31.50 Aligned_cols=35 Identities=11% Similarity=-0.003 Sum_probs=27.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
+.+++|+|+-.|..| +..|..|+++||+|+++-..
T Consensus 20 ~~~~~vvIIG~G~aG-----l~aA~~l~~~g~~v~vie~~ 54 (338)
T 3itj_A 20 HVHNKVTIIGSGPAA-----HTAAIYLARAEIKPILYEGM 54 (338)
T ss_dssp -CEEEEEEECCSHHH-----HHHHHHHHHTTCCCEEECCS
T ss_pred CCCCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEecC
Confidence 345789988766443 78899999999999999763
No 433
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=25.10 E-value=1.5e+02 Score=24.39 Aligned_cols=82 Identities=10% Similarity=-0.051 Sum_probs=45.8
Q ss_pred EEEEEecccc---ccCHHHHHHHHHHHHhcCCceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccChHHHhhcccccc
Q 011832 291 VLYVSFGSIT---LLKREQLIEFWHGLVDSKQRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQEEVLAHQAVAG 367 (476)
Q Consensus 291 ~I~vs~Gs~~---~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~ 367 (476)
+-.++.|+.. .....--..+...+...|..+.+..--+ ++.+.+ .+.+ .+.+..+++
T Consensus 6 v~IistGdEll~G~i~DtN~~~l~~~L~~~G~~v~~~~iv~---Dd~~~I---~~~l------------~~a~~~~Dl-- 65 (172)
T 3kbq_A 6 ASVITVGNEILKGRTVNTNAAFIGNFLTYHGYQVRRGFVVM---DDLDEI---GWAF------------RVALEVSDL-- 65 (172)
T ss_dssp EEEEEECHHHHTTSSCCHHHHHHHHHHHHTTCEEEEEEEEC---SCHHHH---HHHH------------HHHHHHCSE--
T ss_pred EEEEEEcccccCCcEEeHHHHHHHHHHHHCCCEEEEEEEeC---CCHHHH---HHHH------------HHHHhcCCE--
Confidence 5566777664 1222233446677788888776543211 111122 1111 233445777
Q ss_pred cccccCch-----hHHHHHh--hCCceeccCC
Q 011832 368 FLTHSGWN-----STLESIV--AGVPMICWPY 392 (476)
Q Consensus 368 ~I~HGG~~-----s~~eal~--~GvP~l~iP~ 392 (476)
+|+-||.| -+.|++. .|+++..-|-
T Consensus 66 VittGG~g~~~~D~T~ea~a~~~~~~l~~~~e 97 (172)
T 3kbq_A 66 VVSSGGLGPTFDDMTVEGFAKCIGQDLRIDED 97 (172)
T ss_dssp EEEESCCSSSTTCCHHHHHHHHHTCCCEECHH
T ss_pred EEEcCCCcCCcccchHHHHHHHcCCCeeeCHH
Confidence 99999988 3556664 6888777764
No 434
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=24.97 E-value=99 Score=27.25 Aligned_cols=33 Identities=15% Similarity=0.104 Sum_probs=24.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
.|.++++.++.| --.++|+.|+++|++|.++.-
T Consensus 29 ~k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r 61 (271)
T 4iin_A 29 GKNVLITGASKG---IGAEIAKTLASMGLKVWINYR 61 (271)
T ss_dssp CCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 356777744443 357899999999999998876
No 435
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=24.94 E-value=74 Score=28.66 Aligned_cols=38 Identities=24% Similarity=0.329 Sum_probs=29.9
Q ss_pred CCCEEEEEcCCCccCHHHH--HHHHHHHHhCC-CEEEEEeCC
Q 011832 6 KSPHILIFPLPCQSHMNSM--LKLAEIFGLAG-LKVTFLNSK 44 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~--l~La~~L~~rG-H~Vt~~~~~ 44 (476)
++.||||+. +..+|-.+. ..|++.|.+.| .+|++...+
T Consensus 3 ~~~kvLiv~-G~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 3 KPIKTLLIT-GQNNHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCEEEEEEE-SCCSSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CceEEEEEc-CCCCCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 578999995 445886553 67888888898 999999864
No 436
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=24.93 E-value=52 Score=29.57 Aligned_cols=35 Identities=20% Similarity=0.092 Sum_probs=28.7
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKH 45 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~ 45 (476)
+.++|+++..|. -....++.|.+.|++||++.+..
T Consensus 12 ~~k~VLVVGgG~-----va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGE-----VGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESH-----HHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcH-----HHHHHHHHHHhCCCEEEEEcCCC
Confidence 568899987553 56788999999999999999754
No 437
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=24.85 E-value=71 Score=28.47 Aligned_cols=34 Identities=15% Similarity=0.088 Sum_probs=24.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
+.|+++++.++.| =-.++|+.|+++|++|.++.-
T Consensus 23 ~~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r 56 (279)
T 3sju_A 23 RPQTAFVTGVSSG---IGLAVARTLAARGIAVYGCAR 56 (279)
T ss_dssp --CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 3467777755542 357899999999999988775
No 438
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=24.84 E-value=1.9e+02 Score=24.01 Aligned_cols=66 Identities=17% Similarity=0.236 Sum_probs=0.0
Q ss_pred cCchhHHHHHhh--CCceeccCCcccchhhHHHHHhhhcceeeccc-ccCHHHHHHHHHHHHhHhHHHHHHHHHHHHHH
Q 011832 372 SGWNSTLESIVA--GVPMICWPYFADQQINSRFVSEVWNLGLDMKD-VCDRNVVEKMVNDLMVERKEEFMRAADRMATM 447 (476)
Q Consensus 372 GG~~s~~eal~~--GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~~~-~~~~~~l~~~i~~~l~~~~~~y~~~a~~~~~~ 447 (476)
+|+.+++..+.. |+| +--...|-.+||..++.+ - .++...|.++++..-.+......++.+++.+.
T Consensus 105 ~G~dsLlSivqmP~Gvp--VatV~Id~~~nAa~lAaq--------Ila~~d~~l~~kL~~~r~~~~~~v~~~~~~l~~~ 173 (183)
T 1o4v_A 105 NGLDSLFSIVQMPGGVP--VATVAINNAKNAGILAAS--------ILGIKYPEIARKVKEYKERMKREVLEKAQRLEQI 173 (183)
T ss_dssp TTHHHHHHHHTCCTTCC--CEECCTTCHHHHHHHHHH--------HHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHhcCCCCCe--eEEEecCCchHHHHHHHH--------HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
No 439
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=24.81 E-value=89 Score=26.25 Aligned_cols=36 Identities=11% Similarity=-0.006 Sum_probs=29.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
..++++..+..|+-.-+..+++.|+++|+.|..+-.
T Consensus 32 ~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 32 LPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 456777777778888899999999999999887765
No 440
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=24.80 E-value=47 Score=34.33 Aligned_cols=35 Identities=17% Similarity=0.310 Sum_probs=27.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
.++.+|+|+-.|..| +..|..|+++||+||++-..
T Consensus 389 ~~~~~VvIIGgG~AG-----l~aA~~La~~G~~V~liE~~ 423 (690)
T 3k30_A 389 ESDARVLVVGAGPSG-----LEAARALGVRGYDVVLAEAG 423 (690)
T ss_dssp SSCCEEEEECCSHHH-----HHHHHHHHHHTCEEEEECSS
T ss_pred cccceEEEECCCHHH-----HHHHHHHHHCCCeEEEEecC
Confidence 456789999866444 77889999999999999863
No 441
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=24.75 E-value=2.2e+02 Score=21.35 Aligned_cols=48 Identities=8% Similarity=-0.002 Sum_probs=33.9
Q ss_pred hCCceeccCCcccchhhHHHHHhhhcceeecccccCHHHHHHHHHHHHhH
Q 011832 383 AGVPMICWPYFADQQINSRFVSEVWNLGLDMKDVCDRNVVEKMVNDLMVE 432 (476)
Q Consensus 383 ~GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~l~~~i~~~l~~ 432 (476)
..+|++++--..|.. ...+. -+.|+--.+.+.++.++|.++|++++..
T Consensus 76 ~~~~ii~ls~~~~~~-~~~~~-~~~g~~~~l~kp~~~~~l~~~l~~~~~~ 123 (143)
T 3jte_A 76 PHMAVIILTGHGDLD-NAILA-MKEGAFEYLRKPVTAQDLSIAINNAINR 123 (143)
T ss_dssp TTCEEEEEECTTCHH-HHHHH-HHTTCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCCHH-HHHHH-HHhCcceeEeCCCCHHHHHHHHHHHHHH
Confidence 467888775544433 33444 3457766777789999999999999984
No 442
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=24.69 E-value=1.5e+02 Score=25.59 Aligned_cols=46 Identities=15% Similarity=0.039 Sum_probs=31.4
Q ss_pred hhhhhhhcCCCCCeEEEEEeccccccCHHHHHHHHHHHHhcCCceEEE
Q 011832 277 RSCIEWLGKQPVRSVLYVSFGSITLLKREQLIEFWHGLVDSKQRFLWV 324 (476)
Q Consensus 277 ~~~~~~l~~~~~~~~I~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~ 324 (476)
+.+.+|+.. ...+++|..|+........+..+.++|+.++..+..+
T Consensus 22 ~~l~~~~~~--~~~i~iI~~a~~~~~~~~~~~~~~~al~~lG~~~~~v 67 (229)
T 1fy2_A 22 PLIANQLNG--RRSAVFIPFAGVTQTWDEYTDKTAEVLAPLGVNVTGI 67 (229)
T ss_dssp HHHHHHHTT--CCEEEEECTTCCSSCHHHHHHHHHHHHGGGTCEEEET
T ss_pred HHHHHHhcC--CCeEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEE
Confidence 446677753 4569999888643334466777899999998765443
No 443
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=24.68 E-value=32 Score=30.37 Aligned_cols=31 Identities=10% Similarity=0.037 Sum_probs=24.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCC-CEEEEEeC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAG-LKVTFLNS 43 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rG-H~Vt~~~~ 43 (476)
|||+|+..|..| ..+|..|+++| |+|+++..
T Consensus 1 m~i~iiG~G~mG-----~~~a~~l~~~g~~~v~~~~r 32 (263)
T 1yqg_A 1 MNVYFLGGGNMA-----AAVAGGLVKQGGYRIYIANR 32 (263)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHHCSCEEEEECS
T ss_pred CEEEEECchHHH-----HHHHHHHHHCCCCeEEEECC
Confidence 688888765444 35788899999 99998865
No 444
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=24.62 E-value=1.1e+02 Score=23.09 Aligned_cols=39 Identities=13% Similarity=0.121 Sum_probs=0.0
Q ss_pred CCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 1 MEEKPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 1 ~~~~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|+.+.++++|+++- .+-.-...+.+.|.+.|++|..+..
T Consensus 1 Ms~~~~~~~ilivd----d~~~~~~~l~~~L~~~g~~v~~~~~ 39 (136)
T 3hdv_A 1 MSLVAARPLVLVVD----DNAVNREALILYLKSRGIDAVGADG 39 (136)
T ss_dssp ------CCEEEEEC----SCHHHHHHHHHHHHHTTCCEEEESS
T ss_pred CCCCCCCCeEEEEC----CCHHHHHHHHHHHHHcCceEEEeCC
No 445
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=24.60 E-value=28 Score=30.79 Aligned_cols=32 Identities=13% Similarity=0.046 Sum_probs=25.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCC----CEEEEEeC
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLAG----LKVTFLNS 43 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~rG----H~Vt~~~~ 43 (476)
.|||+|+..|..|. .+|..|.++| |+|+++..
T Consensus 4 ~m~i~iiG~G~mG~-----~~a~~l~~~g~~~~~~v~~~~~ 39 (262)
T 2rcy_A 4 NIKLGFMGLGQMGS-----ALAHGIANANIIKKENLFYYGP 39 (262)
T ss_dssp SSCEEEECCSHHHH-----HHHHHHHHHTSSCGGGEEEECS
T ss_pred CCEEEEECcCHHHH-----HHHHHHHHCCCCCCCeEEEEeC
Confidence 57899998765553 4788899999 89988764
No 446
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=24.52 E-value=42 Score=29.93 Aligned_cols=48 Identities=10% Similarity=0.079 Sum_probs=40.3
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHH--------HHhC-CCEEEEEeCCcchhhhhhc
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEI--------FGLA-GLKVTFLNSKHNHERLIRY 53 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~--------L~~r-GH~Vt~~~~~~~~~~~~~~ 53 (476)
++.||++.+.++-.|-....-++.- |..+ |++|..++.....+.+.+.
T Consensus 119 ~~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~vp~e~iv~a 175 (262)
T 1xrs_B 119 RKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQVANEDFIKK 175 (262)
T ss_dssp SCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSSBCHHHHHHH
T ss_pred CCCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCCCCHHHHHHH
Confidence 4678999999999999999989877 9999 9999999986655555444
No 447
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=24.42 E-value=78 Score=25.89 Aligned_cols=37 Identities=14% Similarity=0.373 Sum_probs=29.2
Q ss_pred CCEEEEEcCCCcc-----CHHHHHHHHHHHHhCCCEEEEEeCCc
Q 011832 7 SPHILIFPLPCQS-----HMNSMLKLAEIFGLAGLKVTFLNSKH 45 (476)
Q Consensus 7 ~~~il~~~~~~~g-----H~~p~l~La~~L~~rGH~Vt~~~~~~ 45 (476)
.-+|+|+| ++| --++...|++.|.++|.+|.|..+|-
T Consensus 23 A~~ViIvP--GYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 64 (180)
T 1pno_A 23 ASKVIIVP--GYGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 64 (180)
T ss_dssp CSEEEEEE--CHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCeEEEEC--ChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 45677777 333 23689999999999999999999853
No 448
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=24.39 E-value=93 Score=29.58 Aligned_cols=37 Identities=14% Similarity=-0.015 Sum_probs=27.7
Q ss_pred CCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEe
Q 011832 1 MEEKPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLN 42 (476)
Q Consensus 1 ~~~~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~ 42 (476)
|+.|++.+||+++..+ .-...+++++.+.|++|.++.
T Consensus 18 ~~~mm~~~~I~ilGgG-----~lg~~l~~aa~~lG~~v~~~d 54 (403)
T 3k5i_A 18 QGHMWNSRKVGVLGGG-----QLGRMLVESANRLNIQVNVLD 54 (403)
T ss_dssp ---CCSCCEEEEECCS-----HHHHHHHHHHHHHTCEEEEEE
T ss_pred eccCCCCCEEEEECCC-----HHHHHHHHHHHHCCCEEEEEE
Confidence 4456677899999865 345678888989999999988
No 449
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=24.25 E-value=1.4e+02 Score=26.02 Aligned_cols=38 Identities=16% Similarity=0.251 Sum_probs=27.8
Q ss_pred CEEEEEcCCCc-----------cCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 011832 8 PHILIFPLPCQ-----------SHMNSMLKLAEIFGLAGLKVTFLNSKH 45 (476)
Q Consensus 8 ~~il~~~~~~~-----------gH~~p~l~La~~L~~rGH~Vt~~~~~~ 45 (476)
+||+|+..... -...=+....+.|.++|++|+++++..
T Consensus 4 ~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~g 52 (243)
T 1rw7_A 4 KKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETG 52 (243)
T ss_dssp CEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred ceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCCC
Confidence 47888875422 134567777888899999999999743
No 450
>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*
Probab=24.23 E-value=1.1e+02 Score=27.82 Aligned_cols=33 Identities=12% Similarity=0.048 Sum_probs=24.3
Q ss_pred CEEEEEcCCC-ccCHHHHHHHHHHHHhCCCEEEEEe
Q 011832 8 PHILIFPLPC-QSHMNSMLKLAEIFGLAGLKVTFLN 42 (476)
Q Consensus 8 ~~il~~~~~~-~gH~~p~l~La~~L~~rGH~Vt~~~ 42 (476)
-|+++++.++ .|-+ -.++|+.|+++|++|.++.
T Consensus 9 gk~~lVTGa~~s~GI--G~aia~~la~~G~~Vv~~~ 42 (315)
T 2o2s_A 9 GQTAFVAGVADSHGY--GWAIAKHLASAGARVALGT 42 (315)
T ss_dssp TCEEEEECCSSSSSH--HHHHHHHHHTTTCEEEEEE
T ss_pred CCEEEEeCCCCCCCh--HHHHHHHHHHCCCEEEEEe
Confidence 3567777552 4444 4689999999999999876
No 451
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=24.20 E-value=41 Score=30.31 Aligned_cols=32 Identities=16% Similarity=0.014 Sum_probs=26.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
++|+++-.+..| +..|..|+++||+|+++...
T Consensus 16 ~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~~ 47 (323)
T 3f8d_A 16 FDVIIVGLGPAA-----YGAALYSARYMLKTLVIGET 47 (323)
T ss_dssp EEEEEECCSHHH-----HHHHHHHHHTTCCEEEEESS
T ss_pred cCEEEECccHHH-----HHHHHHHHHCCCcEEEEecc
Confidence 588888866555 78899999999999999874
No 452
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=24.18 E-value=3.2e+02 Score=24.68 Aligned_cols=109 Identities=17% Similarity=0.129 Sum_probs=55.2
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHHhcC-CceEEEECCCCCCCchhhHHHHHHhhcCCceE-eeccChHHHhhcccccc
Q 011832 290 SVLYVSFGSITLLKREQLIEFWHGLVDSK-QRFLWVIRPDSVIGEGDALAELVEGTKERGLL-VSWVPQEEVLAHQAVAG 367 (476)
Q Consensus 290 ~~I~vs~Gs~~~~~~~~~~~~~~a~~~~~-~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~-~~~~pq~~lL~~~~~~~ 367 (476)
.+-+|..|.+.. .++.++...+ ..++.+....... ...+. +..-+ .-+-...++|..+++.+
T Consensus 7 rigiiG~G~ig~-------~~~~~l~~~~~~~~~av~d~~~~~-----~~~~a----~~~~~~~~~~~~~~ll~~~~~D~ 70 (329)
T 3evn_A 7 RYGVVSTAKVAP-------RFIEGVRLAGNGEVVAVSSRTLES-----AQAFA----NKYHLPKAYDKLEDMLADESIDV 70 (329)
T ss_dssp EEEEEBCCTTHH-------HHHHHHHHHCSEEEEEEECSCSST-----TCC-------CCCCSCEESCHHHHHTCTTCCE
T ss_pred EEEEEechHHHH-------HHHHHHHhCCCcEEEEEEcCCHHH-----HHHHH----HHcCCCcccCCHHHHhcCCCCCE
Confidence 477888887752 3455555544 3555555433111 01111 11111 12445678887554444
Q ss_pred cccccC----chhHHHHHhhCCceecc-CCcc--cchhhHHHHHhhhcceeecc
Q 011832 368 FLTHSG----WNSTLESIVAGVPMICW-PYFA--DQQINSRFVSEVWNLGLDMK 414 (476)
Q Consensus 368 ~I~HGG----~~s~~eal~~GvP~l~i-P~~~--DQ~~na~~v~~~~G~G~~~~ 414 (476)
++---. .--+.+|+.+|+++++= |+.. ++-.-...++++.|+-+.+.
T Consensus 71 V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~v~ 124 (329)
T 3evn_A 71 IYVATINQDHYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESCNLFLMEA 124 (329)
T ss_dssp EEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEECCCcHHHHHHHHHHHHCCCeEEEccCCcCCHHHHHHHHHHHHHcCCEEEEE
Confidence 543222 23467889999998862 5533 44444444446656554443
No 453
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=24.14 E-value=95 Score=22.55 Aligned_cols=35 Identities=14% Similarity=0.087 Sum_probs=25.8
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
.+..+|++++..+ . .....+..|.+.|++|.++..
T Consensus 54 ~~~~~iv~yC~~g--~--rs~~a~~~L~~~G~~v~~l~G 88 (103)
T 3eme_A 54 NKNEIYYIVCAGG--V--RSAKVVEYLEANGIDAVNVEG 88 (103)
T ss_dssp CTTSEEEEECSSS--S--HHHHHHHHHHTTTCEEEEETT
T ss_pred CCCCeEEEECCCC--h--HHHHHHHHHHHCCCCeEEeCC
Confidence 4456789998543 2 356678999999999887765
No 454
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=24.13 E-value=2.2e+02 Score=21.15 Aligned_cols=108 Identities=12% Similarity=0.007 Sum_probs=60.4
Q ss_pred cCHHHHHHHHHHHHhcCCceEEEECCCCCCCchhhH-HHHHHhhcCCceEeecc-ChHHHhhcccccccccccCchhHHH
Q 011832 302 LKREQLIEFWHGLVDSKQRFLWVIRPDSVIGEGDAL-AELVEGTKERGLLVSWV-PQEEVLAHQAVAGFLTHSGWNSTLE 379 (476)
Q Consensus 302 ~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~l-~~~~~~~~~nv~~~~~~-pq~~lL~~~~~~~~I~HGG~~s~~e 379 (476)
.++.....+...++..+..++...... ... ..+.. .+..+.+.++- |. + ..|. .+.+
T Consensus 17 d~~~~~~~l~~~L~~~g~~v~~~~~~~------~~a~~~~~~-~~~dlii~d~~~~~-------~------~~g~-~~~~ 75 (140)
T 3cg0_A 17 DGRLAAATLRIQLESLGYDVLGVFDNG------EEAVRCAPD-LRPDIALVDIMLCG-------A------LDGV-ETAA 75 (140)
T ss_dssp CBHHHHHHHHHHHHHHTCEEEEEESSH------HHHHHHHHH-HCCSEEEEESSCCS-------S------SCHH-HHHH
T ss_pred CCHHHHHHHHHHHHHCCCeeEEEECCH------HHHHHHHHh-CCCCEEEEecCCCC-------C------CCHH-HHHH
Confidence 455666667777887788877544422 112 22222 22334444331 10 0 0111 2233
Q ss_pred HHh--hCCceeccCCcccchhhHHHHHhhhcceeecccccCHHHHHHHHHHHHhH
Q 011832 380 SIV--AGVPMICWPYFADQQINSRFVSEVWNLGLDMKDVCDRNVVEKMVNDLMVE 432 (476)
Q Consensus 380 al~--~GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~l~~~i~~~l~~ 432 (476)
.+. ..+|++++--..|.. ..... .+.|+--.+.+.++.++|.++|++++..
T Consensus 76 ~l~~~~~~~ii~ls~~~~~~-~~~~~-~~~g~~~~l~kp~~~~~l~~~i~~~~~~ 128 (140)
T 3cg0_A 76 RLAAGCNLPIIFITSSQDVE-TFQRA-KRVNPFGYLAKPVAADTLHRSIEMAIHK 128 (140)
T ss_dssp HHHHHSCCCEEEEECCCCHH-HHHHH-HTTCCSEEEEESCCHHHHHHHHHHHHHH
T ss_pred HHHhCCCCCEEEEecCCCHH-HHHHH-HhcCCCEEEeCCCCHHHHHHHHHHHHhc
Confidence 332 578888876555433 33344 3457776777789999999999999874
No 455
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=24.13 E-value=1.6e+02 Score=23.59 Aligned_cols=38 Identities=11% Similarity=0.027 Sum_probs=29.3
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
++|||+|+-+++... .-+....+.|...|++|+++++.
T Consensus 1 ~~~ki~il~~~g~~~-~e~~~~~~~l~~ag~~v~~vs~~ 38 (168)
T 3l18_A 1 ASMKVLFLSADGFED-LELIYPLHRIKEEGHEVYVASFQ 38 (168)
T ss_dssp CCCEEEEECCTTBCH-HHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCcEEEEEeCCCccH-HHHHHHHHHHHHCCCEEEEEECC
Confidence 468999998876543 44556678888899999999974
No 456
>3bch_A 40S ribosomal protein SA; laminin receptor, P40 ribosomal protein, acetylation, cytoplasm, phosphorylation, polymorphism; 2.15A {Homo sapiens}
Probab=24.12 E-value=65 Score=28.44 Aligned_cols=31 Identities=13% Similarity=0.190 Sum_probs=24.2
Q ss_pred CceEEE-ECCCcc-hHHHHHHHcCCCeEEEecC
Q 011832 111 PVSCII-GDACME-FVVDVATELEIPVIHFRAI 141 (476)
Q Consensus 111 ~~DlvI-~D~~~~-~~~~vA~~l~iP~i~~~~~ 141 (476)
.||+|| +|...- -++.=|.++|||+|.+.-+
T Consensus 151 ~PdlliV~Dp~~e~~AI~EA~~lgIPvIalvDT 183 (253)
T 3bch_A 151 EPRLLVVTDPRADHQPLTEASYVNLPTIALCNT 183 (253)
T ss_dssp SCSEEEESCTTTTHHHHHHHHHTTCCEEEEECT
T ss_pred CCCEEEEECCCccchHHHHHHHhCCCEEEEEcC
Confidence 678876 676665 6677799999999999654
No 457
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=23.99 E-value=79 Score=25.93 Aligned_cols=39 Identities=21% Similarity=0.175 Sum_probs=29.0
Q ss_pred CCEEEEEcCCCc--c-CHHHHHHHHHHHHhCCCEEEEEeCCc
Q 011832 7 SPHILIFPLPCQ--S-HMNSMLKLAEIFGLAGLKVTFLNSKH 45 (476)
Q Consensus 7 ~~~il~~~~~~~--g-H~~p~l~La~~L~~rGH~Vt~~~~~~ 45 (476)
.-+|+|+|.-+. . --++...|++.|.++|.+|.|..+|-
T Consensus 22 A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 63 (184)
T 1d4o_A 22 ANSIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHPV 63 (184)
T ss_dssp CSEEEEEECHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 346777772211 1 23689999999999999999999853
No 458
>1xv5_A AGT, DNA alpha-glucosyltransferase; HET: DNA CME UDP; 1.73A {Enterobacteria phage T4} PDB: 1y6f_A* 1y6g_A* 1ya6_A* 1y8z_A*
Probab=23.99 E-value=1e+02 Score=26.20 Aligned_cols=37 Identities=24% Similarity=0.170 Sum_probs=26.6
Q ss_pred CCEEEEEcCCC---ccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 7 SPHILIFPLPC---QSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 7 ~~~il~~~~~~---~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
.|||+++..-+ -|-....+.--+-+.+.||+||++..
T Consensus 1 smricifmarglegcgvtkfsleqrdwfiknghevtlvya 40 (401)
T 1xv5_A 1 SMRICIFMARGLEGCGVTKFSLEQRDWFIKNGHEVTLVYA 40 (401)
T ss_dssp CCEEEEEETTCCCSSHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CceEEEEeeccccccCceeeehhhhhhhhcCCcEEEEEEe
Confidence 47888776332 24455566666778999999999876
No 459
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=23.92 E-value=2.8e+02 Score=25.94 Aligned_cols=108 Identities=11% Similarity=0.080 Sum_probs=57.5
Q ss_pred EEEEEec-cccccCHHHHHHHHHHHHhcC-CceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccChHHHhhccccccc
Q 011832 291 VLYVSFG-SITLLKREQLIEFWHGLVDSK-QRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQEEVLAHQAVAGF 368 (476)
Q Consensus 291 ~I~vs~G-s~~~~~~~~~~~~~~a~~~~~-~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ 368 (476)
+-+|..| .+. ...+.++...+ ..++.+.... .+....+.++. ++. -+-...++|..+++.++
T Consensus 5 igiiG~G~~~~-------~~~~~~l~~~~~~~l~av~d~~-----~~~~~~~a~~~--g~~--~~~~~~ell~~~~vD~V 68 (387)
T 3moi_A 5 FGICGLGFAGS-------VLMAPAMRHHPDAQIVAACDPN-----EDVRERFGKEY--GIP--VFATLAEMMQHVQMDAV 68 (387)
T ss_dssp EEEECCSHHHH-------TTHHHHHHHCTTEEEEEEECSC-----HHHHHHHHHHH--TCC--EESSHHHHHHHSCCSEE
T ss_pred EEEEeCCHHHH-------HHHHHHHHhCCCeEEEEEEeCC-----HHHHHHHHHHc--CCC--eECCHHHHHcCCCCCEE
Confidence 6677777 332 22445555543 3555555533 11122333322 222 34466788887555445
Q ss_pred ccccCch----hHHHHHhhCCceec-cCCc--ccchhhHHHHHhhhcceeecc
Q 011832 369 LTHSGWN----STLESIVAGVPMIC-WPYF--ADQQINSRFVSEVWNLGLDMK 414 (476)
Q Consensus 369 I~HGG~~----s~~eal~~GvP~l~-iP~~--~DQ~~na~~v~~~~G~G~~~~ 414 (476)
+---... -+.+|+.+|+++++ =|+. .++-.-...++++.|+-+.+.
T Consensus 69 ~i~tp~~~H~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~ 121 (387)
T 3moi_A 69 YIASPHQFHCEHVVQASEQGLHIIVEKPLTLSRDEADRMIEAVERAGVHLVVG 121 (387)
T ss_dssp EECSCGGGHHHHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHHHTCCEEEC
T ss_pred EEcCCcHHHHHHHHHHHHCCCceeeeCCccCCHHHHHHHHHHHHHhCCeEEEE
Confidence 5433322 47788999999887 3543 344444444446667655554
No 460
>3pnx_A Putative sulfurtransferase DSRE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE GOL; 1.92A {Syntrophomonas wolfei}
Probab=23.92 E-value=1.1e+02 Score=24.84 Aligned_cols=36 Identities=14% Similarity=-0.012 Sum_probs=29.6
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 011832 10 ILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKH 45 (476)
Q Consensus 10 il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~ 45 (476)
..++..+..--.++.+-+|..-++-|++|+++-+..
T Consensus 8 ~II~~sG~~dka~~a~ilA~~AaA~G~eV~iFfTf~ 43 (160)
T 3pnx_A 8 NLLLFSGDYDKALASLIIANAAREMEIEVTIFCAFW 43 (160)
T ss_dssp EEEECCCCHHHHHHHHHHHHHHHHTTCEEEEEECGG
T ss_pred EEEEecCCHHHHHHHHHHHHHHHHcCCCEEEEEeeh
Confidence 344445677888999999999999999999999843
No 461
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=23.89 E-value=86 Score=27.37 Aligned_cols=34 Identities=9% Similarity=0.024 Sum_probs=24.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHh-CCCEEEEEeC
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGL-AGLKVTFLNS 43 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~-rGH~Vt~~~~ 43 (476)
++|.++++ |+.|-+ -.++++.|++ +|++|+++.-
T Consensus 3 ~~k~vlIT-GasggI--G~~~a~~L~~~~g~~V~~~~r 37 (276)
T 1wma_A 3 GIHVALVT-GGNKGI--GLAIVRDLCRLFSGDVVLTAR 37 (276)
T ss_dssp CCCEEEES-SCSSHH--HHHHHHHHHHHSSSEEEEEES
T ss_pred CCCEEEEe-CCCcHH--HHHHHHHHHHhcCCeEEEEeC
Confidence 44566666 344433 4678999999 9999999875
No 462
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=23.66 E-value=1.3e+02 Score=26.26 Aligned_cols=33 Identities=12% Similarity=-0.021 Sum_probs=24.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
.|+++++.++.| =-.++|+.|+++|++|.++.-
T Consensus 7 ~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r 39 (252)
T 3h7a_A 7 NATVAVIGAGDY---IGAEIAKKFAAEGFTVFAGRR 39 (252)
T ss_dssp SCEEEEECCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCch---HHHHHHHHHHHCCCEEEEEeC
Confidence 456666644432 357899999999999998875
No 463
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=23.58 E-value=51 Score=30.15 Aligned_cols=32 Identities=9% Similarity=0.020 Sum_probs=22.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|+|+|. |+.|-+- ..|++.|+++||+|+.+.-
T Consensus 10 ~~vlVT--GatGfIG--~~l~~~Ll~~G~~V~~~~r 41 (338)
T 2rh8_A 10 KTACVV--GGTGFVA--SLLVKLLLQKGYAVNTTVR 41 (338)
T ss_dssp CEEEEE--CTTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEE--CCchHHH--HHHHHHHHHCCCEEEEEEc
Confidence 455544 4555443 4688999999999987654
No 464
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=23.55 E-value=50 Score=30.76 Aligned_cols=38 Identities=24% Similarity=0.048 Sum_probs=26.8
Q ss_pred CCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 1 MEEKPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 1 ~~~~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|...+..+||+|+..|..| ..+|+.|.++||+|+.+..
T Consensus 2 m~~~~~~~kIgIIG~G~mG-----~slA~~L~~~G~~V~~~dr 39 (341)
T 3ktd_A 2 MTTKDISRPVCILGLGLIG-----GSLLRDLHAANHSVFGYNR 39 (341)
T ss_dssp ----CCSSCEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCccCCCCEEEEEeecHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 5555666899999755433 5678999999999998875
No 465
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=23.50 E-value=90 Score=27.86 Aligned_cols=35 Identities=11% Similarity=0.142 Sum_probs=25.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 7 SPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 7 ~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
+.|+++++.++.| =-.++|+.|+++|++|.++.-.
T Consensus 8 ~~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r~ 42 (285)
T 3sc4_A 8 RGKTMFISGGSRG---IGLAIAKRVAADGANVALVAKS 42 (285)
T ss_dssp TTCEEEEESCSSH---HHHHHHHHHHTTTCEEEEEESC
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEECC
Confidence 3467777755543 3468999999999999988753
No 466
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=23.42 E-value=1.7e+02 Score=24.21 Aligned_cols=40 Identities=18% Similarity=0.133 Sum_probs=29.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKH 45 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~ 45 (476)
...+||+|+-.++..- .-+....+.|...|++|++++...
T Consensus 21 ~~~~kV~ill~~g~~~-~e~~~~~~~l~~ag~~v~~vs~~~ 60 (193)
T 1oi4_A 21 GLSKKIAVLITDEFED-SEFTSPADEFRKAGHEVITIEKQA 60 (193)
T ss_dssp TCCCEEEEECCTTBCT-HHHHHHHHHHHHTTCEEEEEESST
T ss_pred ccCCEEEEEECCCCCH-HHHHHHHHHHHHCCCEEEEEECCC
Confidence 3457899998876653 345567778888999999999753
No 467
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=23.42 E-value=1.2e+02 Score=26.75 Aligned_cols=32 Identities=22% Similarity=0.225 Sum_probs=23.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 9 HILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 9 ~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|+++++.+ .|-+ -.++++.|+++|++|+++.-
T Consensus 7 k~vlVTGa-s~gI--G~~ia~~l~~~G~~V~~~~r 38 (278)
T 1spx_A 7 KVAIITGS-SNGI--GRATAVLFAREGAKVTITGR 38 (278)
T ss_dssp CEEEETTT-TSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCC-CchH--HHHHHHHHHHCCCEEEEEeC
Confidence 56666643 3433 46899999999999998875
No 468
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=23.38 E-value=1.6e+02 Score=23.53 Aligned_cols=39 Identities=10% Similarity=0.106 Sum_probs=29.8
Q ss_pred CCCEEEEEcCCCccCHHHHH-HHHHHHHhCCCEEEEEeCC
Q 011832 6 KSPHILIFPLPCQSHMNSML-KLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l-~La~~L~~rGH~Vt~~~~~ 44 (476)
.+.||+++=...+|+..-+. .+++.|.+.|++|.++...
T Consensus 3 ~~~kv~IvY~S~~GnT~~iA~~ia~~l~~~g~~v~~~~~~ 42 (159)
T 3fni_A 3 AETSIGVFYVSEYGYSDRLAQAIINGITKTGVGVDVVDLG 42 (159)
T ss_dssp CCCEEEEEECTTSTTHHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEEEECCChHHHHHHHHHHHHHHHCCCeEEEEECc
Confidence 34577777666679987765 5788899999999888764
No 469
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=23.29 E-value=84 Score=27.86 Aligned_cols=33 Identities=12% Similarity=0.056 Sum_probs=24.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
.|+++++.++.| =-.++|+.|+++|++|.+...
T Consensus 31 gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~~ 63 (271)
T 3v2g_A 31 GKTAFVTGGSRG---IGAAIAKRLALEGAAVALTYV 63 (271)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 467777755442 357899999999999998865
No 470
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=23.23 E-value=2.3e+02 Score=20.91 Aligned_cols=46 Identities=7% Similarity=-0.027 Sum_probs=33.0
Q ss_pred CCceeccCCcccchhhHHHHHhhhcceeecccccCHHHHHHHHHHHHh
Q 011832 384 GVPMICWPYFADQQINSRFVSEVWNLGLDMKDVCDRNVVEKMVNDLMV 431 (476)
Q Consensus 384 GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~l~~~i~~~l~ 431 (476)
.+|++++--..+... ..+. -+.|+--.+.|.++.++|.++|+.++.
T Consensus 81 ~~pii~~s~~~~~~~-~~~~-~~~g~~~~l~KP~~~~~L~~~l~~~l~ 126 (129)
T 3h1g_A 81 EIPIIMITAEGGKAE-VITA-LKAGVNNYIVKPFTPQVLKEKLEVVLG 126 (129)
T ss_dssp TCCEEEEESCCSHHH-HHHH-HHHTCCEEEESCCCHHHHHHHHHHHHC
T ss_pred CCeEEEEeCCCChHH-HHHH-HHcCccEEEeCCCCHHHHHHHHHHHhc
Confidence 578887765554433 3333 345877777788999999999999886
No 471
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=23.22 E-value=86 Score=27.02 Aligned_cols=33 Identities=12% Similarity=-0.040 Sum_probs=24.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
+|+++++.++.| =-.++|+.|+++|++|.++.-
T Consensus 3 ~k~vlVTGas~G---IG~a~a~~l~~~G~~V~~~~r 35 (235)
T 3l6e_A 3 LGHIIVTGAGSG---LGRALTIGLVERGHQVSMMGR 35 (235)
T ss_dssp CCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEEC
Confidence 356666644432 356899999999999988875
No 472
>3ga2_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Bacillus subtilis}
Probab=23.12 E-value=82 Score=27.64 Aligned_cols=41 Identities=17% Similarity=0.101 Sum_probs=27.6
Q ss_pred HHHHHHHhcCCCCceEEEECCCcc-------hHHHHHHHcCCCeEEEe
Q 011832 99 PLLKQMLIDTSPPVSCIIGDACME-------FVVDVATELEIPVIHFR 139 (476)
Q Consensus 99 ~~l~~ll~~~~~~~DlvI~D~~~~-------~~~~vA~~l~iP~i~~~ 139 (476)
+.+.+.++....+||+|++|.... -|..+.-.+++|+|.+.
T Consensus 97 P~ll~al~~L~~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVA 144 (246)
T 3ga2_A 97 PLIIEAAKKLETEPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIA 144 (246)
T ss_dssp HHHHHHHHHCSSCCSCEEEEBCSSSSTTSCCHHHHHHHHHTSCEEEEE
T ss_pred HHHHHHHHhcCCCCCEEEEcCcEEecCCCcchhheeeeecCCCEEeee
Confidence 334444554434899999997665 23456667789999984
No 473
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=23.04 E-value=93 Score=27.36 Aligned_cols=32 Identities=25% Similarity=0.185 Sum_probs=23.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 9 HILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 9 ~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|.++++ |+.|-+ -.++++.|+++|++|+++.-
T Consensus 9 k~vlVT-Gas~gI--G~~ia~~l~~~G~~V~~~~r 40 (264)
T 2dtx_A 9 KVVIVT-GASMGI--GRAIAERFVDEGSKVIDLSI 40 (264)
T ss_dssp CEEEEE-SCSSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEe-CCCCHH--HHHHHHHHHHCCCEEEEEec
Confidence 455555 333433 46899999999999998865
No 474
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=23.03 E-value=90 Score=29.58 Aligned_cols=34 Identities=24% Similarity=0.173 Sum_probs=27.5
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCC-CEEEEEeC
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGLAG-LKVTFLNS 43 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rG-H~Vt~~~~ 43 (476)
+++++|+|+..|. --+..|..|+++| |+|+++-.
T Consensus 4 ~~~~~v~IIGaG~-----aGl~aA~~L~~~g~~~v~v~E~ 38 (424)
T 2b9w_A 4 SKDSRIAIIGAGP-----AGLAAGMYLEQAGFHDYTILER 38 (424)
T ss_dssp CTTCCEEEECCSH-----HHHHHHHHHHHTTCCCEEEECS
T ss_pred CCCCCEEEECcCH-----HHHHHHHHHHhCCCCcEEEEEC
Confidence 4568899988653 4578899999999 99999975
No 475
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=22.99 E-value=73 Score=28.96 Aligned_cols=35 Identities=17% Similarity=0.095 Sum_probs=24.7
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
+.|+|++. |+.|-+ -..|++.|.++||+|+.+.-.
T Consensus 13 ~~~~vlVT--GatG~i--G~~l~~~L~~~g~~V~~~~r~ 47 (335)
T 1rpn_A 13 MTRSALVT--GITGQD--GAYLAKLLLEKGYRVHGLVAR 47 (335)
T ss_dssp --CEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEECC
T ss_pred cCCeEEEE--CCCChH--HHHHHHHHHHCCCeEEEEeCC
Confidence 34676665 455554 367899999999999998753
No 476
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=22.98 E-value=79 Score=27.18 Aligned_cols=41 Identities=7% Similarity=-0.005 Sum_probs=32.3
Q ss_pred CCCEEEEEc--CCCccCHHHHHHHHHHHHhC-CCEEEEEeCCcc
Q 011832 6 KSPHILIFP--LPCQSHMNSMLKLAEIFGLA-GLKVTFLNSKHN 46 (476)
Q Consensus 6 ~~~~il~~~--~~~~gH~~p~l~La~~L~~r-GH~Vt~~~~~~~ 46 (476)
++||++.+. -|+.|--.-...||..|+++ |++|.++-.+..
T Consensus 2 ~~~~vI~v~s~kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~~ 45 (245)
T 3ea0_A 2 NAKRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDISLP 45 (245)
T ss_dssp -CCEEEEEEESSTTSSHHHHHHHHHHHHTTSTTCCEEEEECCTT
T ss_pred CCCeEEEEECCCCCcchHHHHHHHHHHHHhCcCCCEEEEECCCC
Confidence 355665444 46779999999999999999 999999987644
No 477
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=22.96 E-value=1.3e+02 Score=23.44 Aligned_cols=39 Identities=18% Similarity=0.247 Sum_probs=0.0
Q ss_pred CCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 1 MEEKPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 1 ~~~~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|....+++||+++- .+-.-...+.+.|.+.|++|..+..
T Consensus 1 M~~~~~~~~ILivd----d~~~~~~~l~~~L~~~g~~v~~~~~ 39 (154)
T 3gt7_A 1 MSLSNRAGEILIVE----DSPTQAEHLKHILEETGYQTEHVRN 39 (154)
T ss_dssp ------CCEEEEEC----SCHHHHHHHHHHHHTTTCEEEEESS
T ss_pred CCcccCCCcEEEEe----CCHHHHHHHHHHHHHCCCEEEEeCC
No 478
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=22.93 E-value=3.9e+02 Score=23.94 Aligned_cols=108 Identities=11% Similarity=0.107 Sum_probs=0.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcc-hhhhhhcccccccccCCCCeeEEecCCCCCCCCCCCCC
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHN-HERLIRYTDIHDRFLQYSEFQFKTISDGLPADHPRAGD 84 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~ 84 (476)
+++||+++..+..+-+.-.+.-.+.=.-..-=+.+++.... .....+..+ +.+..++...+.
T Consensus 87 ~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~i~~Visn~~~a~~~~A~~~g----------Ip~~~~~~~~~~------- 149 (287)
T 3nrb_A 87 DRKKVVIMVSKFDHCLGDLLYRHRLGELDMEVVGIISNHPREALSVSLVGD----------IPFHYLPVTPAT------- 149 (287)
T ss_dssp CCCEEEEEECSCCHHHHHHHHHHHHTSSCCEEEEEEESSCGGGCCCCCCTT----------SCEEECCCCGGG-------
T ss_pred CCcEEEEEEeCCCcCHHHHHHHHHCCCCCeEEEEEEeCChHHHHHHHHHcC----------CCEEEEeccCcc-------
Q ss_pred cHHHHHHHHHhhchHHHHHHHhcCCCCceEEEECCCcc-hHHHHHHHcCCCeEEEecC
Q 011832 85 QLMEMFDSLSLNTRPLLKQMLIDTSPPVSCIIGDACME-FVVDVATELEIPVIHFRAI 141 (476)
Q Consensus 85 ~~~~~~~~~~~~~~~~l~~ll~~~~~~~DlvI~D~~~~-~~~~vA~~l~iP~i~~~~~ 141 (476)
.....+.+.+.+++. ++|+||.=.+.. -...+-+.+.-.++-++++
T Consensus 150 ---------r~~~~~~~~~~l~~~--~~Dlivlagym~il~~~~l~~~~~~~iNiHpS 196 (287)
T 3nrb_A 150 ---------KAAQESQIKNIVTQS--QADLIVLARYMQILSDDLSAFLSGRCINIHHS 196 (287)
T ss_dssp ---------HHHHHHHHHHHHHHH--TCSEEEESSCCSCCCHHHHHHHTTSEEEEESS
T ss_pred ---------hhhHHHHHHHHHHHh--CCCEEEhhhhhhhcCHHHHhhccCCeEEECcc
No 479
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=22.90 E-value=43 Score=28.85 Aligned_cols=29 Identities=24% Similarity=0.259 Sum_probs=22.7
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 10 ILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 10 il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|+|+--|-. -+.+|..|+++|++|+++--
T Consensus 5 V~IIGaGpa-----GL~aA~~La~~G~~V~v~Ek 33 (336)
T 3kkj_A 5 IAIIGTGIA-----GLSAAQALTAAGHQVHLFDK 33 (336)
T ss_dssp EEEECCSHH-----HHHHHHHHHHTTCCEEEECS
T ss_pred EEEECcCHH-----HHHHHHHHHHCCCCEEEEEC
Confidence 666654422 48899999999999999975
No 480
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=22.90 E-value=66 Score=28.20 Aligned_cols=41 Identities=10% Similarity=0.137 Sum_probs=31.8
Q ss_pred CCCEEEEEc--CCCccCHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 011832 6 KSPHILIFP--LPCQSHMNSMLKLAEIFGLAGLKVTFLNSKHN 46 (476)
Q Consensus 6 ~~~~il~~~--~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~~ 46 (476)
++||++.+. -|+.|--.-...||..|+++|++|.++-.+..
T Consensus 4 ~~~~vI~v~s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 46 (257)
T 1wcv_1 4 AKVRRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLDPQ 46 (257)
T ss_dssp -CCCEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CCCEEEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 356665554 45668888899999999999999999987654
No 481
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=22.87 E-value=94 Score=27.19 Aligned_cols=32 Identities=16% Similarity=0.115 Sum_probs=22.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 9 HILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 9 ~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|.++++ |+.|-+ -.++++.|+++|++|+++.-
T Consensus 13 k~vlVT-Gas~gI--G~~ia~~l~~~G~~V~~~~r 44 (263)
T 3ak4_A 13 RKAIVT-GGSKGI--GAAIARALDKAGATVAIADL 44 (263)
T ss_dssp CEEEEE-TTTSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEe-CCCChH--HHHHHHHHHHCCCEEEEEeC
Confidence 455555 344433 46799999999999998865
No 482
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=22.82 E-value=43 Score=29.58 Aligned_cols=34 Identities=6% Similarity=0.037 Sum_probs=24.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
||.++++ |+.|-+- ..|++.|+++||+|+++.-.
T Consensus 3 ~k~vlVT-Gasg~IG--~~la~~L~~~G~~V~~~~r~ 36 (267)
T 3rft_A 3 MKRLLVT-GAAGQLG--RVMRERLAPMAEILRLADLS 36 (267)
T ss_dssp EEEEEEE-STTSHHH--HHHHHHTGGGEEEEEEEESS
T ss_pred CCEEEEE-CCCCHHH--HHHHHHHHhcCCEEEEEecC
Confidence 4555565 4445443 57899999999999988753
No 483
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=22.82 E-value=75 Score=24.86 Aligned_cols=36 Identities=19% Similarity=0.168 Sum_probs=24.3
Q ss_pred CEEEEEcCCCccCHHHH-HHHHHHHHhCCCEEEEEeC
Q 011832 8 PHILIFPLPCQSHMNSM-LKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~-l~La~~L~~rGH~Vt~~~~ 43 (476)
|||+++-...+|+..-+ ..+++.|.++|++|.++.-
T Consensus 1 mki~iiy~S~~Gnt~~~a~~i~~~l~~~g~~v~~~~~ 37 (147)
T 1f4p_A 1 PKALIVYGSTTGNTEYTAETIARELADAGYEVDSRDA 37 (147)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHHHTCEEEEEEG
T ss_pred CeEEEEEECCcCHHHHHHHHHHHHHHhcCCeeEEEeh
Confidence 57777665556776543 3456677778999988754
No 484
>1q74_A 1D-MYO-inosityl 2-acetamido-2-deoxy-alpha-D- glucopyranoside deacetylase (MSHB); rossmann fold, zinc aminohydrolase; HET: PE4; 1.70A {Mycobacterium tuberculosis} SCOP: c.134.1.1 PDB: 1q7t_A*
Probab=22.78 E-value=98 Score=28.15 Aligned_cols=37 Identities=14% Similarity=0.156 Sum_probs=24.5
Q ss_pred CCCEEEEEcCCCccCH-HHHHHHHHHHHhCCCEEEEEeC
Q 011832 6 KSPHILIFPLPCQSHM-NSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~-~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
++++|+++. +...+. .-+-.....++++|++|++++-
T Consensus 3 ~~~~vL~v~-AHPDDe~l~~ggtla~~~~~G~~V~vv~l 40 (303)
T 1q74_A 3 ETPRLLFVH-AHPDDESLSNGATIAHYTSRGAQVHVVTC 40 (303)
T ss_dssp CCCEEEEEE-SSTTHHHHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCeEEEEE-eCCchHHHhHHHHHHHHHHCCCcEEEEEE
Confidence 366777666 333333 3455666677788999998865
No 485
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=22.72 E-value=1.2e+02 Score=26.26 Aligned_cols=33 Identities=15% Similarity=0.135 Sum_probs=24.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
-|+++++.++. - =-.++|+.|+++|++|.++.-
T Consensus 12 ~k~vlVTGas~-g--IG~aia~~l~~~G~~V~~~~r 44 (252)
T 3f1l_A 12 DRIILVTGASD-G--IGREAAMTYARYGATVILLGR 44 (252)
T ss_dssp TCEEEEESTTS-H--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCC-h--HHHHHHHHHHHCCCEEEEEeC
Confidence 35677774443 2 346899999999999988775
No 486
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=22.72 E-value=3.2e+02 Score=22.36 Aligned_cols=139 Identities=15% Similarity=0.119 Sum_probs=71.5
Q ss_pred eEEEEEeccccccCHHHHHHHHHHHHhcCCceEEEECCCCCCCchhhHHHHHHhhcCCceEeeccChHHHhhcccccccc
Q 011832 290 SVLYVSFGSITLLKREQLIEFWHGLVDSKQRFLWVIRPDSVIGEGDALAELVEGTKERGLLVSWVPQEEVLAHQAVAGFL 369 (476)
Q Consensus 290 ~~I~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I 369 (476)
+.|-|-+||.. +....++....++.++..+-..+-.-+ ...+.+.++.+.. --...++ ||
T Consensus 7 ~~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~SaH--R~p~~~~~~~~~a--------------~~~g~~V--iI 66 (169)
T 3trh_A 7 IFVAILMGSDS--DLSTMETAFTELKSLGIPFEAHILSAH--RTPKETVEFVENA--------------DNRGCAV--FI 66 (169)
T ss_dssp CEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTT--TSHHHHHHHHHHH--------------HHTTEEE--EE
T ss_pred CcEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEccc--CCHHHHHHHHHHH--------------HhCCCcE--EE
Confidence 35667778765 566778888889988876544443221 1111122221110 0012344 88
Q ss_pred cccCchhHHHHHh---hCCceeccCCcccch-hhHHHHH-hh--hccee---ecc--cccCHHHHHHHHHHHHhHhHHHH
Q 011832 370 THSGWNSTLESIV---AGVPMICWPYFADQQ-INSRFVS-EV--WNLGL---DMK--DVCDRNVVEKMVNDLMVERKEEF 437 (476)
Q Consensus 370 ~HGG~~s~~eal~---~GvP~l~iP~~~DQ~-~na~~v~-~~--~G~G~---~~~--~~~~~~~l~~~i~~~l~~~~~~y 437 (476)
.=+|...-+-.+. .-+|+|.+|...-.. .....++ -+ .|+.+ .++ ...++.-++..|-.+ .| +..
T Consensus 67 a~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV~I~~a~~~nAa~lAa~Il~~-~d--~~l 143 (169)
T 3trh_A 67 AAAGLAAHLAGTIAAHTLKPVIGVPMAGGSLGGLDALLSTVQMPGGVPVACTAIGKAGAKNAAILAAQIIAL-QD--KSI 143 (169)
T ss_dssp EEECSSCCHHHHHHHTCSSCEEEEECCCSTTTTHHHHHHHHCCCTTSCCEECCSTHHHHHHHHHHHHHHHHT-TC--HHH
T ss_pred EECChhhhhHHHHHhcCCCCEEEeecCCCCCCCHHHHHHhhcCCCCCceEEEecCCccchHHHHHHHHHHcC-CC--HHH
Confidence 8777554333333 357999999854221 1111110 12 24431 122 123445555444333 24 678
Q ss_pred HHHHHHHHHHHHHH
Q 011832 438 MRAADRMATMARTT 451 (476)
Q Consensus 438 ~~~a~~~~~~~~~~ 451 (476)
+++.+..++..++.
T Consensus 144 ~~kl~~~r~~~~~~ 157 (169)
T 3trh_A 144 AQKLVQQRTAKRET 157 (169)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 88888888877653
No 487
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=22.70 E-value=77 Score=24.17 Aligned_cols=39 Identities=15% Similarity=0.199 Sum_probs=25.1
Q ss_pred CCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCC--EEEEEeC
Q 011832 1 MEEKPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGL--KVTFLNS 43 (476)
Q Consensus 1 ~~~~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH--~Vt~~~~ 43 (476)
|.+|.+++||+++- .+-.-...+.+.|.+.|+ +|..+..
T Consensus 1 M~~m~~~~~ILivd----d~~~~~~~l~~~L~~~g~~~~v~~~~~ 41 (143)
T 2qvg_A 1 MSLAADKVDILYLE----DDEVDIQSVERVFHKISSLIKIEIAKS 41 (143)
T ss_dssp ------CCSEEEEC----CCHHHHHHHHHHHHHHCTTCCEEEESS
T ss_pred CCcccCCCeEEEEe----CCHHHHHHHHHHHHHhCCCceEEEECC
Confidence 77788889999886 455666777888888898 7776665
No 488
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=22.69 E-value=1.2e+02 Score=26.63 Aligned_cols=32 Identities=9% Similarity=0.054 Sum_probs=23.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 9 HILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 9 ~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|+++++.++.| --.++|+.|+++|++|.+..-
T Consensus 12 k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 43 (264)
T 3ucx_A 12 KVVVISGVGPA---LGTTLARRCAEQGADLVLAAR 43 (264)
T ss_dssp CEEEEESCCTT---HHHHHHHHHHHTTCEEEEEES
T ss_pred cEEEEECCCcH---HHHHHHHHHHHCcCEEEEEeC
Confidence 56666644443 347899999999999988765
No 489
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=22.66 E-value=1e+02 Score=26.61 Aligned_cols=36 Identities=14% Similarity=0.074 Sum_probs=28.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 011832 5 PKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSKH 45 (476)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~~ 45 (476)
.+.++|+++..| ......++.|.+.|++||++.+..
T Consensus 29 L~gk~VLVVGgG-----~va~~ka~~Ll~~GA~VtVvap~~ 64 (223)
T 3dfz_A 29 LKGRSVLVVGGG-----TIATRRIKGFLQEGAAITVVAPTV 64 (223)
T ss_dssp CTTCCEEEECCS-----HHHHHHHHHHGGGCCCEEEECSSC
T ss_pred cCCCEEEEECCC-----HHHHHHHHHHHHCCCEEEEECCCC
Confidence 346788888754 456788899999999999999853
No 490
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=22.60 E-value=1.5e+02 Score=25.92 Aligned_cols=33 Identities=6% Similarity=-0.056 Sum_probs=24.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
.|+++++.++ |-+ -.++|+.|+++|++|.+...
T Consensus 4 ~k~vlVTGas-~gI--G~aia~~l~~~G~~vv~~~~ 36 (258)
T 3oid_A 4 NKCALVTGSS-RGV--GKAAAIRLAENGYNIVINYA 36 (258)
T ss_dssp CCEEEESSCS-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEecCC-chH--HHHHHHHHHHCCCEEEEEcC
Confidence 4567777444 333 46899999999999998744
No 491
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=22.56 E-value=2.1e+02 Score=28.21 Aligned_cols=24 Identities=17% Similarity=0.034 Sum_probs=20.2
Q ss_pred ccccccCch------hHHHHHhhCCceecc
Q 011832 367 GFLTHSGWN------STLESIVAGVPMICW 390 (476)
Q Consensus 367 ~~I~HGG~~------s~~eal~~GvP~l~i 390 (476)
++++|.|-| .+.||-+.++|+|++
T Consensus 66 v~~~tsGpG~~N~~~~l~~A~~~~~Pll~i 95 (528)
T 1q6z_A 66 FINLHSAAGTGNAMGALSNAWNSHSPLIVT 95 (528)
T ss_dssp EEEEEHHHHHHHTHHHHHHHHHTTCCEEEE
T ss_pred EEEEcCChHHHHHHHHHHHHhhcCCCEEEE
Confidence 377888754 689999999999999
No 492
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=22.49 E-value=77 Score=27.84 Aligned_cols=34 Identities=12% Similarity=0.163 Sum_probs=24.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 9 HILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 9 ~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|+++++..+. .--=-.++|+.|+++|++|.+..-
T Consensus 7 K~alVTGaa~-~~GIG~aiA~~la~~Ga~Vvi~~r 40 (256)
T 4fs3_A 7 KTYVIMGIAN-KRSIAFGVAKVLDQLGAKLVFTYR 40 (256)
T ss_dssp CEEEEECCCS-TTCHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCC-CchHHHHHHHHHHHCCCEEEEEEC
Confidence 6777775332 111247899999999999998875
No 493
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=22.39 E-value=61 Score=29.71 Aligned_cols=32 Identities=13% Similarity=0.126 Sum_probs=23.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLA--GLKVTFLNS 43 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~r--GH~Vt~~~~ 43 (476)
|+|+|. |+.|.+ -..|++.|+++ ||+|+.+.-
T Consensus 5 ~~vlVT--GatG~i--G~~l~~~L~~~~~g~~V~~~~r 38 (348)
T 1oc2_A 5 KNIIVT--GGAGFI--GSNFVHYVYNNHPDVHVTVLDK 38 (348)
T ss_dssp SEEEEE--TTTSHH--HHHHHHHHHHHCTTCEEEEEEC
T ss_pred cEEEEe--CCccHH--HHHHHHHHHHhCCCCEEEEEeC
Confidence 466555 455544 35788999998 899999875
No 494
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=22.39 E-value=48 Score=28.09 Aligned_cols=38 Identities=13% Similarity=0.162 Sum_probs=18.4
Q ss_pred CCCCCCCCEEEEEcCCCc--cCHHHHHHHHHHHHhCCCEEE
Q 011832 1 MEEKPKSPHILIFPLPCQ--SHMNSMLKLAEIFGLAGLKVT 39 (476)
Q Consensus 1 ~~~~~~~~~il~~~~~~~--gH~~p~l~La~~L~~rGH~Vt 39 (476)
|+. +++|||+++...-+ |.-.-+...+.+....|++|+
T Consensus 1 m~~-M~~mkIl~I~GS~r~~s~t~~la~~~~~~~~~g~~v~ 40 (199)
T 4hs4_A 1 MTT-TSPLHFVTLLGSLRKASFNAAVARALPEIAPEGIAIT 40 (199)
T ss_dssp -----CCEEEEEEECCCSTTCHHHHHHHHHHHHCCTTEEEE
T ss_pred CCC-CCCCEEEEEEcCCCCCChHHHHHHHHHHHccCCCEEE
Confidence 454 44789988874432 333333333333334577776
No 495
>1xx6_A Thymidine kinase; NESG, northeast structural genomics consortium, protein STRU initiative, PSI, structural genomics, DNA synthesis; HET: ADP; 2.00A {Clostridium acetobutylicum} SCOP: c.37.1.24 g.39.1.14
Probab=22.33 E-value=1.3e+02 Score=25.06 Aligned_cols=44 Identities=9% Similarity=0.139 Sum_probs=35.2
Q ss_pred CCCCCCCCEEEEEcCC-CccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 1 MEEKPKSPHILIFPLP-CQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 1 ~~~~~~~~~il~~~~~-~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
|-....+.+|.++..+ +.|-..-.+.++..+..+|.+|.++.+.
T Consensus 1 ~~~~~~~g~i~v~~G~mgsGKTT~ll~~a~r~~~~g~kV~v~k~~ 45 (191)
T 1xx6_A 1 MYRPKDHGWVEVIVGPMYSGKSEELIRRIRRAKIAKQKIQVFKPE 45 (191)
T ss_dssp -CCCTTCCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCcCCCCCEEEEEECCCCCcHHHHHHHHHHHHHHCCCEEEEEEec
Confidence 3344455678777766 8899999999999999999999999863
No 496
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=22.32 E-value=1.5e+02 Score=22.83 Aligned_cols=39 Identities=13% Similarity=0.169 Sum_probs=27.3
Q ss_pred CCCCCCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 1 MEEKPKSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 1 ~~~~~~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|...+++++|+++- .+-.-...+.+.|.+.|++|..+..
T Consensus 1 Ms~~~~~~~iLivd----d~~~~~~~l~~~L~~~g~~v~~~~~ 39 (154)
T 2rjn_A 1 MSLNYKNYTVMLVD----DEQPILNSLKRLIKRLGCNIITFTS 39 (154)
T ss_dssp ---CCSCCEEEEEC----SCHHHHHHHHHHHHTTTCEEEEESC
T ss_pred CCCCCCCCeEEEEc----CCHHHHHHHHHHHHHcCCeEEEeCC
Confidence 66667788999886 4555667788888889999885554
No 497
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=22.28 E-value=71 Score=27.68 Aligned_cols=33 Identities=24% Similarity=0.308 Sum_probs=23.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 011832 9 HILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNSK 44 (476)
Q Consensus 9 ~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~~ 44 (476)
|.++++ |+.|-+ -.++++.|+++||+|+++.-.
T Consensus 8 k~vlVT-Gasggi--G~~~a~~l~~~G~~V~~~~r~ 40 (258)
T 3afn_B 8 KRVLIT-GSSQGI--GLATARLFARAGAKVGLHGRK 40 (258)
T ss_dssp CEEEET-TCSSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEe-CCCChH--HHHHHHHHHHCCCEEEEECCC
Confidence 344555 444544 457899999999999988753
No 498
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=22.27 E-value=36 Score=33.46 Aligned_cols=31 Identities=23% Similarity=0.224 Sum_probs=25.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 8 PHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 8 ~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
|||+|+..|..|. .+|..|+++||+|+++..
T Consensus 2 MkIgVIG~G~mG~-----~lA~~La~~G~~V~v~dr 32 (478)
T 1pgj_A 2 MDVGVVGLGVMGA-----NLALNIAEKGFKVAVFNR 32 (478)
T ss_dssp BSEEEECCSHHHH-----HHHHHHHHTTCCEEEECS
T ss_pred CEEEEEChHHHHH-----HHHHHHHHCCCEEEEEeC
Confidence 7899997666554 578999999999998865
No 499
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=22.23 E-value=2.3e+02 Score=20.58 Aligned_cols=46 Identities=7% Similarity=-0.072 Sum_probs=31.9
Q ss_pred CCceeccCCcccchhhHHHHHhhhcceeecccccCHHHHHHHHHHHHh
Q 011832 384 GVPMICWPYFADQQINSRFVSEVWNLGLDMKDVCDRNVVEKMVNDLMV 431 (476)
Q Consensus 384 GvP~l~iP~~~DQ~~na~~v~~~~G~G~~~~~~~~~~~l~~~i~~~l~ 431 (476)
.+|++++--..+.. ...+. -+.|+--.+.+.++.++|.++|++++.
T Consensus 73 ~~~ii~~t~~~~~~-~~~~~-~~~ga~~~l~KP~~~~~l~~~i~~~l~ 118 (120)
T 3f6p_A 73 DMPIIMLTAKDSEI-DKVIG-LEIGADDYVTKPFSTRELLARVKANLR 118 (120)
T ss_dssp CSCEEEEEESSCHH-HHHHH-HHTTCCEEEEESCCHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCChH-HHHHH-HhCCcceeEcCCCCHHHHHHHHHHHHh
Confidence 57777765444443 33344 345877777778999999999988875
No 500
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=27.64 E-value=19 Score=30.71 Aligned_cols=33 Identities=21% Similarity=0.099 Sum_probs=25.6
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011832 6 KSPHILIFPLPCQSHMNSMLKLAEIFGLAGLKVTFLNS 43 (476)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~l~La~~L~~rGH~Vt~~~~ 43 (476)
+.|||+|+..|..| ..+|+.|.+.||+|+++..
T Consensus 18 ~~~~I~iIG~G~mG-----~~la~~L~~~G~~V~~~~r 50 (201)
T 2yjz_A 18 KQGVVCIFGTGDFG-----KSLGLKMLQCGYSVVFGSR 50 (201)
Confidence 46789998766666 3568889999999988754
Done!