BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>011833
MFVLGYQNGAVLHINNPAGSNPSPRVRVRVPVVPLRALYAHRGVTEKKPSNVVRNKPKRK
ICTADELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFAR
YMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETVM
QSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHYLEEDVPAV
MEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASSLDYRPSNS
LLRLLLPLSDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDMMHPELFEK
LIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAADQDLICPTE
AVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTRHDMT

High Scoring Gene Products

Symbol, full name Information P value
AT1G15060 protein from Arabidopsis thaliana 7.8e-144
AT1G73750 protein from Arabidopsis thaliana 2.0e-86
PFL_1870
Uncharacterized protein
protein from Pseudomonas protegens Pf-5 4.8e-05
lip1
lipase family member 1
gene from Dictyostelium discoideum 0.00029

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  011833
        (476 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2196179 - symbol:AT1G15060 species:3702 "Arabi...  1025  7.8e-144  2
TAIR|locus:2027784 - symbol:AT1G73750 "AT1G73750" species...   864  2.0e-86   1
UNIPROTKB|Q4KFJ4 - symbol:PFL_1870 "Uncharacterized prote...    87  4.8e-05   3
DICTYBASE|DDB_G0268966 - symbol:lip1 "lipase family membe...    79  0.00029   3


>TAIR|locus:2196179 [details] [associations]
            symbol:AT1G15060 species:3702 "Arabidopsis thaliana"
            [GO:0009507 "chloroplast" evidence=IDA] EMBL:CP002684 GO:GO:0009507
            GO:GO:0016787 EMBL:AY090351 EMBL:BT001059 EMBL:AK176025
            IPI:IPI00544913 RefSeq:NP_172960.2 UniGene:At.41944
            ProteinModelPortal:Q8RX69 SMR:Q8RX69 PRIDE:Q8RX69
            EnsemblPlants:AT1G15060.1 GeneID:838071 KEGG:ath:AT1G15060
            TAIR:At1g15060 HOGENOM:HOG000238187 InParanoid:Q8RX69 OMA:PCITEFL
            PhylomeDB:Q8RX69 ProtClustDB:CLSN2680703 Genevestigator:Q8RX69
            InterPro:IPR016969 PIRSF:PIRSF031088 Uniprot:Q8RX69
        Length = 578

 Score = 1025 (365.9 bits), Expect = 7.8e-144, Sum P(2) = 7.8e-144
 Identities = 192/307 (62%), Positives = 232/307 (75%)

Query:   168 ESQSKSQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDW 227
             ES+  S L+  V   +QRL  L ++G+   +P   DLQERL+ ++EDFQKQLDLIVK DW
Sbjct:   270 ESKQNSGLVNQVRDLAQRLVNLFDDGQRSVSPPLIDLQERLTATIEDFQKQLDLIVKYDW 329

Query:   228 DFDHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVT 287
             DFDHYLEEDVPA +EY+R  SKPKDGKL A+GHSMGGILLYAMLS C FEG++   A+V 
Sbjct:   330 DFDHYLEEDVPAAIEYVRAQSKPKDGKLFAIGHSMGGILLYAMLSRCAFEGREPSVAAVA 389

Query:   288 TLASSLDYXXXXXXXXXXXXXXDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLI 347
             TLASS+DY              +P +AL+VPV+PLG  LAA  P ++ PPYVLSWL  LI
Sbjct:   390 TLASSVDYTTSNSALKLLIPLANPAEALSVPVVPLGALLAAAFPLSTRPPYVLSWLNDLI 449

Query:   348 SAPDMMHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVL 407
             S+ DMMHPE+ EKL+ +NF  IP KL+ QLTT F+EGGL DRSG F+YKDH+ +T+VPVL
Sbjct:   450 SSTDMMHPEMLEKLVLNNFCTIPAKLLIQLTTAFREGGLRDRSGKFYYKDHLPRTSVPVL 509

Query:   408 ALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCII 467
             ALA D+DLICP  AV +TVKL PE+LV++K+ GEP GPHYAHYDLVG RLA  QVYPCI 
Sbjct:   510 ALAGDRDLICPPAAVEDTVKLFPENLVTYKLLGEPDGPHYAHYDLVGGRLAVEQVYPCIT 569

Query:   468 EFLTRHD 474
             EFL+ HD
Sbjct:   570 EFLSHHD 576

 Score = 402 (146.6 bits), Expect = 7.8e-144, Sum P(2) = 7.8e-144
 Identities = 82/137 (59%), Positives = 98/137 (71%)

Query:    50 SNVVRNKPKRKICTADELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIG 109
             S+ V+   K  +CTADELHYV+VPN+DWRLALWRYLP P AP RNHPLLLLSG+GTNAIG
Sbjct:    52 SSSVKLPTKPSLCTADELHYVSVPNTDWRLALWRYLPPPQAPTRNHPLLLLSGVGTNAIG 111

Query:   110 YDLSPEYSFARYMSGQGFDTWILEVRGAGLSAHRVEFG--EDSMITSANA-KSTGGTTLS 166
             YDLSP  SFAR+MSGQGF+TWILEVRGAGLS    +    E+S    +N  +ST      
Sbjct:   112 YDLSPGCSFARHMSGQGFETWILEVRGAGLSTRVSDLKDVEESAHELSNQIESTARAAAG 171

Query:   167 RESQSKSQLMETVMQSS 183
             +E+ S  +    +M SS
Sbjct:   172 KETCSDEKQTTDIMDSS 188

 Score = 65 (27.9 bits), Expect = 3.1e-108, Sum P(2) = 3.1e-108
 Identities = 14/27 (51%), Positives = 19/27 (70%)

Query:   168 ESQSKSQLMETVMQSSQRLSGLLNEGE 194
             ESQ  ++L  T M  S+RLSG L+EG+
Sbjct:   207 ESQLVARLTSTFMSLSERLSGFLSEGQ 233


>TAIR|locus:2027784 [details] [associations]
            symbol:AT1G73750 "AT1G73750" species:3702 "Arabidopsis
            thaliana" [GO:0015996 "chlorophyll catabolic process" evidence=RCA]
            EMBL:CP002684 InterPro:IPR016969 PIRSF:PIRSF031088 EMBL:AF419606
            EMBL:AY113044 IPI:IPI00529361 RefSeq:NP_565071.1 UniGene:At.27382
            ProteinModelPortal:Q8W568 PaxDb:Q8W568 PRIDE:Q8W568
            EnsemblPlants:AT1G73750.1 GeneID:843710 KEGG:ath:AT1G73750
            TAIR:At1g73750 eggNOG:NOG324581 OMA:PAETWIG PhylomeDB:Q8W568
            ProtClustDB:CLSN2917443 Genevestigator:Q8W568 Uniprot:Q8W568
        Length = 452

 Score = 864 (309.2 bits), Expect = 2.0e-86, P = 2.0e-86
 Identities = 164/302 (54%), Positives = 207/302 (68%)

Query:   173 SQLMETVMQSSQRLSGLLNEGEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDFDHY 232
             S L+E  +  S+RL  +L+ G      +   +Q+RLS    DF+++ +LI   +WDFD+Y
Sbjct:   154 SNLLENFISVSERLENVLDGGS-----KILGMQDRLSKRAGDFKQRFELIPHYNWDFDNY 208

Query:   233 LEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLASS 292
             LEEDVP+ M+Y+RT +K KDGKLLAVGHSMGGILLYA+LS CGF+G DSG A VTTLAS+
Sbjct:   209 LEEDVPSAMDYVRTQTKSKDGKLLAVGHSMGGILLYALLSRCGFKGMDSGLAGVTTLAST 268

Query:   293 LDYXXXXXXXXXXXXXXDPIQALNVPVIPLGTFLAAIHPFASSPPYVLSWLKFLISAPDM 352
              DY              +P QA+N+P++P+ T LA  HP    PPY LSWL   ISAP M
Sbjct:   269 FDYSSSGTLLKYLLPMKEPAQAINLPIMPIDTMLAMAHPLMCRPPYSLSWLTANISAPQM 328

Query:   353 MHPELFEKLIFSNFGNIPTKLISQLTTVFQEGGLCDRSGTFFYKDHIGKTNVPVLALAAD 412
             M PE+ EKL+ ++   +P KL+ QLTT    GGL DR+GTF YKDHI KTNVP+LALA D
Sbjct:   329 MDPEVIEKLVLNSLCTVPVKLLLQLTTAVDHGGLRDRTGTFCYKDHISKTNVPILALAGD 388

Query:   413 QDLICPTEAVYETVKLIPEHLVSFKVFGEPRGPHYAHYDLVGSRLAAYQVYPCIIEFLTR 472
              D+ICP +AVY+TVKLIPEHL ++KV G P GPHY H DL+  R A  +VYP I  FL +
Sbjct:   389 WDIICPPDAVYDTVKLIPEHLATYKVVGSPGGPHYGHQDLISGRTARNEVYPLITRFLQQ 448

Query:   473 HD 474
              D
Sbjct:   449 QD 450

 Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
 Identities = 88/172 (51%), Positives = 110/172 (63%)

Query:    60 KICTADELHYVAVPNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPEYSFA 119
             +ICTADELHYV VPNSDWR+ALWRYLPSP AP+RNHPLLLLSGIGTNA+ YDLSPE SFA
Sbjct:    55 EICTADELHYVPVPNSDWRVALWRYLPSPKAPKRNHPLLLLSGIGTNAVTYDLSPECSFA 114

Query:   120 RYMSGQGFDTWILEVRGAGLSAHRVEFGEDSMITSANAKSTGGTTLSRESQSKSQLMETV 179
             R MSG GFDTWILE+RGAGLS+  V    D+ +   N +    + L     S S+ +E V
Sbjct:   115 RSMSGSGFDTWILELRGAGLSSLSV----DTNLGKGNNQQRIVSNLLENFISVSERLENV 170

Query:   180 MQSSQRLSGLLNE--GEDPDAPQFFDLQERLSTSLEDFQKQLDLIVKNDWDF 229
             +    ++ G+ +       D  Q F+L    +    DF   L+  V +  D+
Sbjct:   171 LDGGSKILGMQDRLSKRAGDFKQRFELIPHYNW---DFDNYLEEDVPSAMDY 219


>UNIPROTKB|Q4KFJ4 [details] [associations]
            symbol:PFL_1870 "Uncharacterized protein" species:220664
            "Pseudomonas protegens Pf-5" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0008150 "biological_process" evidence=ND] EMBL:CP000076
            RefSeq:YP_258989.2 ProteinModelPortal:Q4KFJ4 GeneID:3479046
            KEGG:pfl:PFL_1870 PATRIC:19872975 eggNOG:NOG298534
            HOGENOM:HOG000247173 ProtClustDB:CLSK866771
            BioCyc:PFLU220664:GIX8-1879-MONOMER Uniprot:Q4KFJ4
        Length = 329

 Score = 87 (35.7 bits), Expect = 4.8e-05, Sum P(3) = 4.8e-05
 Identities = 24/75 (32%), Positives = 37/75 (49%)

Query:    73 PNSDWRLALWRYLPSPAAPQRNHPLLLLSGIGTNAIGYDLSPE-YSFARYMSGQGFDTWI 131
             P+    LA+ R   +     R  P++LL G  +N   +  SP+      Y++  GFD WI
Sbjct:    34 PDPSVELAVTRLGLADEPEARGIPVVLLHGSFSNR-RFWYSPKGIGLGAYLARAGFDVWI 92

Query:   132 LEVRGAGLSAHRVEF 146
              E+RG GLS    ++
Sbjct:    93 PEMRGHGLSRRNADY 107

 Score = 61 (26.5 bits), Expect = 4.8e-05, Sum P(3) = 4.8e-05
 Identities = 17/70 (24%), Positives = 34/70 (48%)

Query:   399 IGKTNVPVLALAADQDLICPTEAVYETVKLIPEHLVSFKVFGEPRG--PHYAHYDLVGSR 456
             + +  VP LA++A  D   PT A  +  + +      F   G  +G   ++ H +++ S+
Sbjct:   238 LAQVTVPALAVSAAGDHQDPTWACRKLFEQLGSEQKQFVCLGREQGFSGNFGHVEMLVSK 297

Query:   457 LAAYQVYPCI 466
              A  +V+P +
Sbjct:   298 PAQTEVWPLV 307

 Score = 58 (25.5 bits), Expect = 4.8e-05, Sum P(3) = 4.8e-05
 Identities = 19/62 (30%), Positives = 29/62 (46%)

Query:   232 YLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMGGILLYAMLSHCGFEGKDSGFASVTTLAS 291
             Y   D+PA+  ++R  S         +GHS+GG  L A L    + G D+G AS     +
Sbjct:   115 YARYDLPAIAAFVREQSVQVPHW---IGHSLGGTTLAAALGG-QYLG-DAGVASAAFFGT 169

Query:   292 SL 293
              +
Sbjct:   170 QI 171


>DICTYBASE|DDB_G0268966 [details] [associations]
            symbol:lip1 "lipase family member 1" species:44689
            "Dictyostelium discoideum" [GO:0016788 "hydrolase activity, acting
            on ester bonds" evidence=IEA] [GO:0006629 "lipid metabolic process"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0044351
            "macropinocytosis" evidence=RCA] InterPro:IPR006693
            InterPro:IPR025483 Pfam:PF04083 PIRSF:PIRSF000862
            dictyBase:DDB_G0268966 InterPro:IPR000073 Pfam:PF00561
            GO:GO:0016042 EMBL:AAFI02000004 eggNOG:COG0596 GO:GO:0016788
            RefSeq:XP_646929.1 ProteinModelPortal:Q55EU1
            EnsemblProtists:DDB0202316 GeneID:8616617 KEGG:ddi:DDB_G0268966
            InParanoid:Q55EU1 OMA:IDILFEV ProtClustDB:CLSZ2431482
            Uniprot:Q55EU1
        Length = 414

 Score = 79 (32.9 bits), Expect = 0.00029, Sum P(3) = 0.00029
 Identities = 25/80 (31%), Positives = 38/80 (47%)

Query:   396 KDHIGKTNVPVLALAADQDLICPTEAVYETVKLIPE--HLVSFKVFGEPRGPHYAHYDLV 453
             K  I + N PV+A +  QD +   + V     LIP+   LV +K       P Y+H D V
Sbjct:   339 KYDITQFNTPVIAFSGGQDFLADPDDV---AWLIPQLKSLVYYKNL-----PTYSHLDFV 390

Query:   454 GSRLAAYQVYPCIIEFLTRH 473
                 A   VY  ++ +LT++
Sbjct:   391 WGETAYIDVYADVVTYLTKY 410

 Score = 64 (27.6 bits), Expect = 0.00029, Sum P(3) = 0.00029
 Identities = 22/73 (30%), Positives = 34/73 (46%)

Query:    78 RLALWRYLPSPAAPQRN-HPLLLLS-G---IGTNAIGYDLSPEYSFARYMSGQGFDTWIL 132
             R+   RY  +P    +N  P ++L  G   IGT+ +   L+   S    ++  GFD WI 
Sbjct:    76 RIPAGRYASNPNPNGKNGKPAVILQHGVEDIGTSWVN-QLNVYQSLGFILADAGFDVWIN 134

Query:   133 EVRGAGLSAHRVE 145
              VRG   S   ++
Sbjct:   135 NVRGTRYSNSSID 147

 Score = 60 (26.2 bits), Expect = 0.00029, Sum P(3) = 0.00029
 Identities = 15/39 (38%), Positives = 21/39 (53%)

Query:   227 WDF--DHYLEEDVPAVMEYIRTLSKPKDGKLLAVGHSMG 263
             W F  D   E D+P V++Y+  L    + K+  VGHS G
Sbjct:   156 WQFSYDQMAEFDLPCVIDYV--LEVTGNSKVGYVGHSQG 192


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.136   0.411    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      476       451   0.00092  118 3  11 22  0.39    34
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  619 (66 KB)
  Total size of DFA:  283 KB (2148 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  39.46u 0.09s 39.55t   Elapsed:  00:00:02
  Total cpu time:  39.46u 0.09s 39.55t   Elapsed:  00:00:02
  Start:  Mon May 20 15:01:43 2013   End:  Mon May 20 15:01:45 2013

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