BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>011834
MVGKGAKTNCKSASHKLFKDKAKTRVDDLQGKFLDLQFARKESRTVDVSLLEEQVHQMLR
EWKAELHEPSPASSLQQDGSLGFSSDIYRLLQLCEEEDDATSTLTAPKPEPNDQVLPVAD
TAVYHEQHSFPLVDQCKNSSSGVHSTAINNLEGSTLLDYHHFDLHQEFEQNFYAGYNVSN
FCGEDAMQQISGYLPGICPPPSAFLGPKCALWDCPRPAQGVDWYQDYCSGFHAALAFSEG
PPGMGPVLRPGGIGLKDGLLFAALSARAQGKDVGIPECEGAATAKSPWNAPELFDLSVLE
GETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPL
NHFEWHLYEYEINKCDACALYRLELKLVDGKKSAKGKLANDSVADLQKQMGRLTAEFPSD
NKRLVKGRAKVNAKAGVGGNIYPASNVVASTNEKFDYGPTGQFDYLIENLSEYYLT

High Scoring Gene Products

Symbol, full name Information P value
VOZ1
AT1G28520
protein from Arabidopsis thaliana 3.9e-186
VOZ2
AT2G42400
protein from Arabidopsis thaliana 1.7e-89

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  011834
        (476 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2018738 - symbol:VOZ1 "AT1G28520" species:3702...  1805  3.9e-186  1
TAIR|locus:2053786 - symbol:VOZ2 "AT2G42400" species:3702...   893  1.7e-89   1


>TAIR|locus:2018738 [details] [associations]
            symbol:VOZ1 "AT1G28520" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=IDA]
            [GO:0009610 "response to symbiotic fungus" evidence=RCA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0048574 "long-day
            photoperiodism, flowering" evidence=IMP] [GO:0048578 "positive
            regulation of long-day photoperiodism, flowering" evidence=IMP]
            PROSITE:PS50103 EMBL:CP002684 GO:GO:0005634 GO:GO:0005737
            GO:GO:0045893 GO:GO:0046872 GO:GO:0043565 GO:GO:0006351
            GO:GO:0009585 GO:GO:0048578 GO:GO:0048574 EMBL:AC010155
            EMBL:AC007508 EMBL:AB125256 EMBL:BT020261 EMBL:AK227014
            EMBL:AK317006 IPI:IPI00545506 PIR:B86411 RefSeq:NP_001077618.1
            RefSeq:NP_174174.1 UniGene:At.40873 IntAct:Q9SGQ0
            EnsemblPlants:AT1G28520.1 EnsemblPlants:AT1G28520.2 GeneID:839752
            KEGG:ath:AT1G28520 TAIR:At1g28520 HOGENOM:HOG000030392
            InParanoid:Q9SGQ0 OMA:HLPHSEN PhylomeDB:Q9SGQ0
            ProtClustDB:CLSN2679633 Genevestigator:Q9SGQ0 Uniprot:Q9SGQ0
        Length = 486

 Score = 1805 (640.5 bits), Expect = 3.9e-186, P = 3.9e-186
 Identities = 354/496 (71%), Positives = 396/496 (79%)

Query:     1 MVGKGAKTNCKSASHKLFKDKAKTRVDDLQGKFLDLQFARKESRTVDVSLLEEQVHQMLR 60
             M GK +KTNC+SASHKLFKDKAK RVDDLQG  LDLQFARKESR  DV+LLEEQV+QMLR
Sbjct:     1 MTGKRSKTNCRSASHKLFKDKAKNRVDDLQGMLLDLQFARKESRPTDVTLLEEQVNQMLR 60

Query:    61 EWKAELHEPSPASSLQQDGSLG-FSSDIYRLLQLCEEEDDATSTLTAPKPEPNDQVLPVA 119
             EWK+EL+EPSPASSLQQ G+LG FSSDI RLLQLC+EEDDATS L APKPEP DQ L   
Sbjct:    61 EWKSELNEPSPASSLQQGGTLGSFSSDICRLLQLCDEEDDATSKLAAPKPEPADQNLEAG 120

Query:   120 DTAVYHE---------QHSFPLVDQCKNSSSGVHSTAINNLEGSTLLDYHH-FDLHQEFE 169
               AV+           +H  PLVD CK+ S      A NN +G+  L+YH  +DL QEFE
Sbjct:   121 KAAVFQRGYNLVQGKSEHGLPLVDNCKDLSLA----AGNNFDGTAPLEYHQQYDLQQEFE 176

Query:   170 QNFYAGYNVSNFCGE-DAMQQISGYLPGICPPPSAFLGPKCALWDCPRPAQGVDWYQDYC 228
              NF  G+N     G  +    IS ++P ICPPPSAFLGPKCALWDCPRPAQG DW+QDYC
Sbjct:   177 PNFNGGFNNCPSYGVVEGPIHISNFIPTICPPPSAFLGPKCALWDCPRPAQGFDWFQDYC 236

Query:   229 SGFHAALAFSEGPPGMGPVLRPGGIGLKDGLLFAALSARAQGKDVGIPECEGAATAKSPW 288
             S FHAALAF+EGPPGM PV+RPGGIGLKDGLLFAALSA+A GKDVGIPECEGAATAKSPW
Sbjct:   237 SSFHAALAFNEGPPGMNPVVRPGGIGLKDGLLFAALSAKAGGKDVGIPECEGAATAKSPW 296

Query:   289 NAPELFDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGG 348
             NAPELFDL+VLE ET+REWLFFDKPRRAFESGNRKQRSLPDY+GRGWHESRKQ+M EFGG
Sbjct:   297 NAPELFDLTVLESETLREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQIMVEFGG 356

Query:   349 LKRSYYMDPQPLNHFEWHLYEYEINKCDACALYRLELKLVDGKKSAKGKLANDSVADLQK 408
             LKRSYYMDPQPL+HFEWHLYEYEINKCDACALYRLELKLVDGKK++KGK++NDSVADLQK
Sbjct:   357 LKRSYYMDPQPLHHFEWHLYEYEINKCDACALYRLELKLVDGKKTSKGKVSNDSVADLQK 416

Query:   409 QMGRLTAEFP---------SDNKRLVKGRAKVNAKAGVGGNIYPASNVVASTNEKFDYGP 459
             QMGRLTAEFP         ++NKR +KGR KV+ K   G N+    N V   N   DYG 
Sbjct:   417 QMGRLTAEFPPENNTTNTTNNNKRCIKGRPKVSTKVATG-NV---QNTVEQAN---DYGV 469

Query:   460 TGQFDYLIENLSEYYL 475
               +F+YL+ NLS+YY+
Sbjct:   470 GEEFNYLVGNLSDYYI 485


>TAIR|locus:2053786 [details] [associations]
            symbol:VOZ2 "AT2G42400" species:3702 "Arabidopsis
            thaliana" [GO:0043565 "sequence-specific DNA binding" evidence=IDA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0048574 "long-day photoperiodism, flowering"
            evidence=IMP] [GO:0048578 "positive regulation of long-day
            photoperiodism, flowering" evidence=IMP] PROSITE:PS50103
            GO:GO:0005634 GO:GO:0005737 GO:GO:0045893 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0043565 GO:GO:0006351
            GO:GO:0009585 GO:GO:0048578 GO:GO:0048574 EMBL:AC005956
            HOGENOM:HOG000030392 EMBL:AB125257 EMBL:AF361831 EMBL:AY078048
            IPI:IPI00519948 PIR:E84853 RefSeq:NP_565972.1 UniGene:At.28716
            IntAct:Q9SLB9 PaxDb:Q9SLB9 PRIDE:Q9SLB9 EnsemblPlants:AT2G42400.1
            GeneID:818841 KEGG:ath:AT2G42400 TAIR:At2g42400 eggNOG:NOG269595
            InParanoid:Q9SLB9 OMA:ITSQYDY PhylomeDB:Q9SLB9
            ProtClustDB:CLSN2917313 Genevestigator:Q9SLB9 Uniprot:Q9SLB9
        Length = 450

 Score = 893 (319.4 bits), Expect = 1.7e-89, P = 1.7e-89
 Identities = 193/383 (50%), Positives = 243/383 (63%)

Query:    49 SLLEEQVHQMLREWKA--ELHEPSPASSLQQDGSLGFSSDIYRLLQ-LCEEEDDATSTLT 105
             SLL E + Q L E+    +L E   A+S  ++ + G   D     Q LC  E  + +   
Sbjct:    66 SLLGEGISQFLEEFAPLLKLDEEDDATSTLKEHA-GAKPDPEGFSQSLCPPEWTSENFSQ 124

Query:   106 APKPEPN-----DQVLPVADTAVYHEQHSFPLVDQCKNSSSGVHSTAIN-NLEGSTLLDY 159
             +P    N     +  L   +T      + +   D   NS+   H   ++ NL+ ++  DY
Sbjct:   125 SPF-NGNFSCGFEDALNSTETHGQQLHYGYEGFDPSINSAPDFHDQKLSSNLDITSQYDY 183

Query:   160 HHFDLHQEFEQNFYAGYNVSNFCGEDAMQQISGYLPG-ICPPPSAFLGPKCALWDCPRPA 218
                ++ QE + +     + S     D   + S   P  +  PPSAFLGPKCALWDC RPA
Sbjct:   184 IFSEVRQELDNSPSTKLDSSEEI--DNFAEFS--TPSSVRVPPSAFLGPKCALWDCTRPA 239

Query:   219 QGVDWYQDYCSGFHAALAFSEGPPGMGPVLRPGGIGLKDGLLFAALSARAQGKDVGIPEC 278
             QG +WY DYCS +H  LA +E  PG  PVLRPGGI LKD LL  AL A+ QGK+VGIP C
Sbjct:   240 QGSEWYLDYCSNYHGTLALNEDSPGTAPVLRPGGISLKDNLLIDALRAKTQGKNVGIPVC 299

Query:   279 EGAATAKSPWNAPELFDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHES 338
             EGA   K PWNA ELF L ++EGETIREWLFFDKPRRA++SGNRKQRSLPDYSGRGWHES
Sbjct:   300 EGAVNTKCPWNAAELFHLELVEGETIREWLFFDKPRRAYDSGNRKQRSLPDYSGRGWHES 359

Query:   339 RKQVMNEFGGLKRSYYMDPQPLNHFEWHLYEYEINKCDACALYRLELKLVDGKKSAKGKL 398
             RKQ+M E  G KRSYYMDPQP   FEWHL+EY+IN+ DACALYRLELK+ +GKKS KGK+
Sbjct:   360 RKQLMKEQEGQKRSYYMDPQPPGPFEWHLFEYQINESDACALYRLELKVGNGKKSPKGKI 419

Query:   399 ANDSVADLQKQMG--RLTAEFPS 419
             + D +ADLQK+MG  ++ ++ PS
Sbjct:   420 SKDPLADLQKKMGQFKVASDKPS 442

 Score = 194 (73.4 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 62/161 (38%), Positives = 86/161 (53%)

Query:    12 SASHKLFKDKAKTRVDDLQGKFLDLQFARKESRTVDVSLLEEQVHQMLREWKAELHEPSP 71
             +++H+  ++K +    +LQ +F  LQ ARKE R  D++LLE Q+ Q +REW+AEL  PSP
Sbjct:     8 TSAHQNVEEKLR----ELQERFCHLQAARKEGRHGDLALLEAQISQNIREWQAELTAPSP 63

Query:    72 ASSLQQDGSLGFSSDIYRLLQLCEEEDDATSTL---TAPKPEP---NDQVLPVADTAVYH 125
              SSL  +G   F  +   LL+L +EEDDATSTL      KP+P   +  + P   T+   
Sbjct:    64 ESSLLGEGISQFLEEFAPLLKL-DEEDDATSTLKEHAGAKPDPEGFSQSLCPPEWTSENF 122

Query:   126 EQHSFPLVDQCKNSSSGVHSTAINNLE--GSTL-LDYHHFD 163
              Q  F       N S G    A+N+ E  G  L   Y  FD
Sbjct:   123 SQSPFN-----GNFSCGFED-ALNSTETHGQQLHYGYEGFD 157


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.134   0.413    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      476       476   0.00078  119 3  11 22  0.43    34
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  624 (66 KB)
  Total size of DFA:  323 KB (2163 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  43.82u 0.14s 43.96t   Elapsed:  00:00:03
  Total cpu time:  43.82u 0.14s 43.96t   Elapsed:  00:00:03
  Start:  Mon May 20 15:09:09 2013   End:  Mon May 20 15:09:12 2013

Back to top